Query 010754
Match_columns 502
No_of_seqs 804 out of 4146
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 13:34:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010754.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010754hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.4E-44 4.8E-49 358.6 35.5 266 187-476 118-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 3.1E-40 1.1E-44 316.1 34.6 263 191-477 50-320 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 1.5E-39 5.2E-44 309.1 36.4 246 207-476 5-257 (304)
4 1vyh_C Platelet-activating fac 100.0 1.2E-39 4E-44 323.2 36.1 245 208-476 101-367 (410)
5 4gqb_B Methylosome protein 50; 100.0 4.2E-39 1.4E-43 310.8 34.4 244 212-477 79-330 (344)
6 1got_B GT-beta; complex (GTP-b 100.0 1.4E-38 4.6E-43 307.5 36.8 263 205-475 45-340 (340)
7 2pbi_B Guanine nucleotide-bind 100.0 1.5E-38 5.2E-43 308.8 37.2 263 206-475 55-354 (354)
8 3ow8_A WD repeat-containing pr 100.0 1.2E-38 4E-43 305.2 34.9 247 208-476 25-277 (321)
9 2pm7_B Protein transport prote 100.0 6.2E-38 2.1E-42 296.9 35.6 248 208-477 2-284 (297)
10 3frx_A Guanine nucleotide-bind 100.0 2.9E-37 9.8E-42 295.5 37.6 248 208-477 10-266 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-37 3.6E-42 301.9 34.9 250 207-477 7-282 (345)
12 2ynn_A Coatomer subunit beta'; 100.0 4.8E-37 1.6E-41 291.9 36.9 267 186-475 22-299 (304)
13 3frx_A Guanine nucleotide-bind 100.0 2E-36 6.8E-41 289.6 36.8 261 191-477 32-316 (319)
14 2hes_X YDR267CP; beta-propelle 100.0 2.2E-36 7.5E-41 290.8 36.3 248 207-477 6-279 (330)
15 4g56_B MGC81050 protein; prote 100.0 4.1E-37 1.4E-41 299.1 31.5 247 209-477 88-342 (357)
16 2xzm_R RACK1; ribosome, transl 100.0 3.1E-36 1.1E-40 291.4 36.6 250 206-476 12-283 (343)
17 3iz6_a 40S ribosomal protein R 100.0 1.9E-37 6.5E-42 304.2 28.4 264 207-477 58-374 (380)
18 3bg1_A Protein SEC13 homolog; 100.0 8.8E-38 3E-42 298.6 23.4 247 209-477 7-292 (316)
19 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.3E-36 2.8E-40 288.6 35.0 272 186-478 25-335 (345)
20 1nr0_A Actin interacting prote 100.0 3.3E-36 1.1E-40 313.9 34.1 249 205-476 49-353 (611)
21 2xtc_A F-box-like/WD repeat-co 100.0 8E-40 2.7E-44 233.9 4.7 84 3-88 2-85 (90)
22 1erj_A Transcriptional repress 100.0 1.7E-35 5.7E-40 291.8 36.8 244 216-477 124-388 (393)
23 2xzm_R RACK1; ribosome, transl 100.0 2E-35 6.9E-40 285.7 36.6 244 207-477 68-339 (343)
24 4gqb_B Methylosome protein 50; 100.0 2.4E-36 8.3E-41 291.5 30.0 251 212-476 27-287 (344)
25 2hes_X YDR267CP; beta-propelle 100.0 9E-36 3.1E-40 286.5 33.2 252 208-477 49-327 (330)
26 4ery_A WD repeat-containing pr 100.0 3.7E-35 1.3E-39 279.9 36.9 246 207-476 15-266 (312)
27 3f3f_A Nucleoporin SEH1; struc 100.0 1E-35 3.5E-40 286.9 31.8 250 208-477 4-336 (351)
28 2ymu_A WD-40 repeat protein; u 100.0 2.4E-35 8.3E-40 305.4 36.7 246 202-475 331-577 (577)
29 4g56_B MGC81050 protein; prote 100.0 7.8E-36 2.7E-40 290.0 29.8 247 210-476 37-299 (357)
30 4ery_A WD repeat-containing pr 100.0 1.4E-34 5E-39 275.7 37.7 266 187-476 33-310 (312)
31 3jrp_A Fusion protein of prote 100.0 3E-35 1E-39 287.6 33.4 249 207-477 3-286 (379)
32 1erj_A Transcriptional repress 100.0 8.4E-35 2.9E-39 286.7 35.8 256 212-476 61-339 (393)
33 2ymu_A WD-40 repeat protein; u 100.0 5.1E-34 1.7E-38 295.5 38.4 245 203-475 291-536 (577)
34 3dm0_A Maltose-binding peripla 100.0 2.6E-34 8.8E-39 304.3 35.6 248 208-476 375-630 (694)
35 4aow_A Guanine nucleotide-bind 100.0 1.5E-33 5.1E-38 271.6 37.1 248 208-476 31-284 (340)
36 3mmy_A MRNA export factor; mRN 100.0 1.7E-34 5.7E-39 281.0 30.7 250 203-474 27-342 (368)
37 3zwl_B Eukaryotic translation 100.0 3.6E-33 1.2E-37 271.7 37.8 246 207-477 24-345 (369)
38 3dm0_A Maltose-binding peripla 100.0 6.3E-34 2.2E-38 301.3 34.8 260 191-476 397-691 (694)
39 1nr0_A Actin interacting prote 100.0 3.1E-34 1.1E-38 299.0 31.6 237 213-476 16-268 (611)
40 3dwl_C Actin-related protein 2 100.0 2E-35 6.7E-40 289.4 20.8 243 210-476 6-279 (377)
41 4a11_B DNA excision repair pro 100.0 7.4E-33 2.5E-37 273.4 38.4 262 206-478 34-365 (408)
42 1k8k_C P40, ARP2/3 complex 41 100.0 9.9E-34 3.4E-38 276.4 31.0 246 210-478 3-274 (372)
43 3ei3_B DNA damage-binding prot 100.0 1.6E-33 5.5E-38 276.5 32.3 244 207-476 65-337 (383)
44 1r5m_A SIR4-interacting protei 100.0 4.5E-33 1.5E-37 276.4 34.7 238 214-476 107-423 (425)
45 1sq9_A Antiviral protein SKI8; 100.0 1.5E-33 5E-38 277.9 30.6 258 207-477 54-394 (397)
46 3odt_A Protein DOA1; ubiquitin 100.0 1.5E-32 5E-37 261.3 36.1 243 207-477 51-295 (313)
47 1gxr_A ESG1, transducin-like e 100.0 2E-32 6.8E-37 263.1 37.1 245 210-476 46-294 (337)
48 1sq9_A Antiviral protein SKI8; 100.0 1.4E-33 4.6E-38 278.1 29.3 250 207-476 8-320 (397)
49 3k26_A Polycomb protein EED; W 100.0 2.3E-34 7.9E-39 279.9 23.3 238 214-476 68-364 (366)
50 1r5m_A SIR4-interacting protei 100.0 3.1E-33 1.1E-37 277.6 31.4 250 212-476 42-317 (425)
51 4h5i_A Guanine nucleotide-exch 100.0 9.5E-33 3.2E-37 269.0 34.1 196 274-477 133-342 (365)
52 4e54_B DNA damage-binding prot 100.0 4.9E-34 1.7E-38 285.2 25.6 216 208-439 112-337 (435)
53 1gxr_A ESG1, transducin-like e 100.0 6.1E-32 2.1E-36 259.7 38.3 239 213-476 95-335 (337)
54 1k8k_C P40, ARP2/3 complex 41 100.0 8.9E-33 3.1E-37 269.6 32.8 250 207-476 44-359 (372)
55 3jro_A Fusion protein of prote 100.0 8.2E-34 2.8E-38 302.5 27.5 248 208-477 2-284 (753)
56 2pm9_A Protein WEB1, protein t 100.0 9.2E-34 3.2E-38 281.0 25.7 247 212-477 64-336 (416)
57 1yfq_A Cell cycle arrest prote 100.0 1.6E-33 5.6E-38 271.6 26.7 245 209-477 5-281 (342)
58 3mkq_A Coatomer beta'-subunit; 100.0 7.2E-33 2.5E-37 298.7 34.2 246 207-476 5-257 (814)
59 4aez_A CDC20, WD repeat-contai 100.0 2.3E-32 7.9E-37 270.1 34.5 243 208-477 126-379 (401)
60 2j04_B YDR362CP, TAU91; beta p 100.0 1.3E-33 4.4E-38 286.3 25.8 259 209-478 201-517 (524)
61 2j04_B YDR362CP, TAU91; beta p 100.0 3.4E-34 1.2E-38 290.6 21.3 241 214-475 132-425 (524)
62 3ei3_B DNA damage-binding prot 100.0 1E-32 3.5E-37 270.8 30.7 240 212-477 115-381 (383)
63 4gga_A P55CDC, cell division c 100.0 4.2E-32 1.4E-36 269.9 35.0 239 211-476 143-393 (420)
64 3odt_A Protein DOA1; ubiquitin 100.0 3E-32 1E-36 259.2 32.2 238 206-476 9-253 (313)
65 2xyi_A Probable histone-bindin 100.0 1.3E-32 4.4E-37 274.4 31.0 257 208-477 121-409 (430)
66 2aq5_A Coronin-1A; WD40 repeat 100.0 9.6E-33 3.3E-37 272.9 28.8 252 207-477 73-341 (402)
67 3gre_A Serine/threonine-protei 100.0 6.8E-33 2.3E-37 277.0 27.5 253 201-476 48-357 (437)
68 3i2n_A WD repeat-containing pr 100.0 3.4E-32 1.2E-36 263.7 31.7 241 212-477 62-352 (357)
69 4aow_A Guanine nucleotide-bind 100.0 2.6E-31 9E-36 255.8 36.4 262 190-477 52-336 (340)
70 3dw8_B Serine/threonine-protei 100.0 1.5E-32 5E-37 275.2 27.2 250 213-477 26-372 (447)
71 3vl1_A 26S proteasome regulato 100.0 6.1E-32 2.1E-36 268.5 30.8 241 211-477 94-364 (420)
72 3dwl_C Actin-related protein 2 100.0 8.3E-33 2.8E-37 270.7 24.1 251 206-475 46-376 (377)
73 3i2n_A WD repeat-containing pr 100.0 3.3E-32 1.1E-36 263.8 27.4 247 208-477 11-290 (357)
74 2pm9_A Protein WEB1, protein t 100.0 4.7E-33 1.6E-37 275.9 21.7 257 206-477 104-413 (416)
75 3v7d_B Cell division control p 100.0 4E-31 1.4E-35 266.3 35.8 240 207-476 113-379 (464)
76 2j04_A TAU60, YPL007P, hypothe 100.0 5.2E-32 1.8E-36 268.3 27.9 253 214-485 14-305 (588)
77 3sfz_A APAF-1, apoptotic pepti 100.0 2.9E-31 9.8E-36 299.1 37.1 246 207-476 607-911 (1249)
78 1got_B GT-beta; complex (GTP-b 100.0 3.1E-31 1.1E-35 255.9 31.5 199 271-476 52-255 (340)
79 3k26_A Polycomb protein EED; W 100.0 2.5E-32 8.7E-37 265.5 23.9 248 209-477 12-317 (366)
80 3vl1_A 26S proteasome regulato 100.0 1.6E-31 5.5E-36 265.4 30.1 248 207-476 131-417 (420)
81 2pm7_B Protein transport prote 100.0 2.3E-31 8E-36 251.7 29.4 227 187-428 19-284 (297)
82 2pbi_B Guanine nucleotide-bind 100.0 5.2E-31 1.8E-35 255.7 31.1 203 207-426 146-354 (354)
83 3gre_A Serine/threonine-protei 100.0 8.1E-32 2.8E-36 269.2 25.6 252 213-475 109-437 (437)
84 3dw8_B Serine/threonine-protei 100.0 3.1E-31 1E-35 265.5 29.1 257 208-475 74-443 (447)
85 3mkq_A Coatomer beta'-subunit; 100.0 7.5E-31 2.6E-35 282.9 34.0 266 187-475 23-299 (814)
86 1p22_A F-BOX/WD-repeat protein 100.0 7.2E-31 2.5E-35 262.3 30.3 238 206-478 164-414 (435)
87 4ggc_A P55CDC, cell division c 100.0 6.4E-30 2.2E-34 243.7 34.7 239 211-476 63-313 (318)
88 3v7d_B Cell division control p 100.0 4.7E-30 1.6E-34 258.5 34.7 254 192-476 135-419 (464)
89 1pgu_A Actin interacting prote 100.0 1.6E-30 5.5E-35 271.0 31.3 240 213-476 16-281 (615)
90 1yfq_A Cell cycle arrest prote 100.0 2.8E-30 9.4E-35 249.0 29.9 233 208-470 49-315 (342)
91 1p22_A F-BOX/WD-repeat protein 100.0 1E-29 3.5E-34 253.9 34.7 233 209-476 127-363 (435)
92 4aez_A CDC20, WD repeat-contai 100.0 7.1E-30 2.4E-34 252.2 33.0 242 208-477 84-335 (401)
93 2oaj_A Protein SNI1; WD40 repe 100.0 2.6E-30 9E-35 279.5 31.7 222 209-451 11-282 (902)
94 3iz6_a 40S ribosomal protein R 100.0 1.3E-30 4.3E-35 255.6 25.7 212 208-431 150-377 (380)
95 4gq1_A NUP37; propeller, trans 100.0 6.8E-31 2.3E-35 258.7 23.7 246 209-474 83-385 (393)
96 2aq5_A Coronin-1A; WD40 repeat 100.0 3.1E-30 1E-34 254.9 28.1 241 217-477 36-298 (402)
97 3bg1_A Protein SEC13 homolog; 100.0 5E-31 1.7E-35 251.7 21.7 223 191-428 27-292 (316)
98 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.2E-30 3.2E-34 255.4 31.5 252 216-476 5-337 (450)
99 1pgu_A Actin interacting prote 100.0 1.3E-29 4.4E-34 264.2 33.5 253 206-477 54-327 (615)
100 2ovr_B FBW7, F-BOX/WD repeat p 100.0 2.2E-29 7.7E-34 252.2 33.9 237 208-477 192-441 (445)
101 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.7E-29 1.3E-33 250.6 35.3 236 207-476 110-346 (445)
102 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.4E-29 4.6E-34 254.2 31.0 226 211-452 98-366 (450)
103 3sfz_A APAF-1, apoptotic pepti 100.0 1.9E-29 6.6E-34 284.2 35.6 263 190-476 628-1032(1249)
104 3vu4_A KMHSV2; beta-propeller 100.0 5.2E-30 1.8E-34 248.8 26.5 235 208-477 12-270 (355)
105 3lrv_A PRE-mRNA-splicing facto 100.0 1.4E-30 4.7E-35 251.7 18.7 225 222-476 43-290 (343)
106 4h5i_A Guanine nucleotide-exch 100.0 2E-29 6.9E-34 245.5 26.5 199 213-429 131-343 (365)
107 2j04_A TAU60, YPL007P, hypothe 100.0 2.4E-29 8.1E-34 249.3 25.6 220 213-453 83-343 (588)
108 2w18_A PALB2, fancn, partner a 100.0 1.6E-28 5.5E-33 228.8 26.9 249 218-476 42-355 (356)
109 3f3f_A Nucleoporin SEH1; struc 100.0 2.3E-28 7.8E-33 235.3 28.5 222 207-436 49-344 (351)
110 3zwl_B Eukaryotic translation 100.0 9.1E-28 3.1E-32 233.4 30.5 228 206-434 65-351 (369)
111 4gga_A P55CDC, cell division c 100.0 6.5E-27 2.2E-31 232.4 36.3 247 203-476 89-351 (420)
112 2oaj_A Protein SNI1; WD40 repe 100.0 1.5E-28 5.1E-33 265.8 25.1 250 210-475 430-780 (902)
113 3jrp_A Fusion protein of prote 100.0 1.3E-27 4.5E-32 233.3 28.7 201 270-477 7-239 (379)
114 2xyi_A Probable histone-bindin 100.0 9.8E-28 3.3E-32 239.1 28.1 215 206-430 172-411 (430)
115 3lrv_A PRE-mRNA-splicing facto 100.0 2.6E-28 8.9E-33 235.7 22.5 240 215-476 76-331 (343)
116 4e54_B DNA damage-binding prot 100.0 2.4E-28 8.3E-33 243.9 20.8 197 272-476 117-325 (435)
117 3bws_A Protein LP49; two-domai 100.0 3.7E-26 1.3E-30 227.8 33.1 240 210-476 164-430 (433)
118 2w18_A PALB2, fancn, partner a 100.0 2.3E-27 7.8E-32 221.1 21.2 211 214-427 110-355 (356)
119 1l0q_A Surface layer protein; 100.0 1.6E-25 5.6E-30 219.9 35.0 240 208-476 25-273 (391)
120 4ggc_A P55CDC, cell division c 100.0 6.3E-25 2.2E-29 209.0 36.1 247 203-476 9-271 (318)
121 4a11_B DNA excision repair pro 100.0 7.3E-27 2.5E-31 230.4 22.9 199 271-477 40-275 (408)
122 3jro_A Fusion protein of prote 99.9 2.9E-26 1E-30 244.2 27.3 201 270-477 5-237 (753)
123 4gq1_A NUP37; propeller, trans 99.9 8.6E-27 2.9E-31 229.4 19.4 201 209-427 130-387 (393)
124 3mmy_A MRNA export factor; mRN 99.9 4.7E-25 1.6E-29 214.1 28.0 199 270-476 35-302 (368)
125 3bws_A Protein LP49; two-domai 99.9 1.5E-24 5E-29 216.1 30.8 245 209-476 117-388 (433)
126 3vu4_A KMHSV2; beta-propeller 99.9 4.8E-25 1.6E-29 213.8 26.0 228 216-476 59-334 (355)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 6.6E-24 2.2E-28 210.1 28.9 228 204-453 167-410 (415)
128 1l0q_A Surface layer protein; 99.9 2.5E-23 8.5E-28 204.3 30.6 220 228-476 3-231 (391)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.5E-23 5E-28 207.6 25.3 241 209-478 111-385 (415)
130 2ojh_A Uncharacterized protein 99.9 2.5E-23 8.5E-28 195.3 25.5 242 203-469 29-293 (297)
131 1ri6_A Putative isomerase YBHE 99.9 4.7E-21 1.6E-25 184.1 30.1 241 212-477 34-307 (343)
132 2ecf_A Dipeptidyl peptidase IV 99.9 3.5E-22 1.2E-26 213.0 21.9 253 215-477 36-366 (741)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 2.5E-21 8.4E-26 192.4 24.5 212 215-430 36-279 (434)
134 3u4y_A Uncharacterized protein 99.9 3.1E-20 1.1E-24 177.8 27.9 245 208-477 33-303 (331)
135 2oit_A Nucleoporin 214KDA; NH2 99.9 4.2E-21 1.4E-25 190.7 20.6 177 275-453 37-253 (434)
136 1nir_A Nitrite reductase; hemo 99.9 4.4E-20 1.5E-24 188.4 27.7 241 207-476 171-456 (543)
137 2ecf_A Dipeptidyl peptidase IV 99.9 4.1E-20 1.4E-24 197.0 26.7 232 217-477 110-412 (741)
138 2z3z_A Dipeptidyl aminopeptida 99.9 8.7E-20 3E-24 193.4 29.0 260 203-475 108-432 (706)
139 1xfd_A DIP, dipeptidyl aminope 99.9 4.4E-21 1.5E-25 203.9 18.8 237 218-477 19-341 (723)
140 3vgz_A Uncharacterized protein 99.9 7.9E-19 2.7E-23 169.4 32.7 235 216-468 89-334 (353)
141 1nir_A Nitrite reductase; hemo 99.9 1.5E-19 5E-24 184.5 28.8 255 208-476 215-512 (543)
142 3hfq_A Uncharacterized protein 99.9 2.6E-19 8.7E-24 172.7 28.0 243 212-477 36-316 (347)
143 3vgz_A Uncharacterized protein 99.9 2.7E-19 9.2E-24 172.7 27.7 235 215-476 40-301 (353)
144 1xfd_A DIP, dipeptidyl aminope 99.9 9.3E-20 3.2E-24 193.7 26.2 248 207-477 49-392 (723)
145 1k32_A Tricorn protease; prote 99.9 6.2E-20 2.1E-24 202.7 25.1 250 206-475 236-499 (1045)
146 1pby_B Quinohemoprotein amine 99.8 3.1E-19 1.1E-23 170.9 25.9 235 217-476 35-308 (337)
147 2ojh_A Uncharacterized protein 99.8 1.5E-19 5.1E-24 169.4 22.9 209 232-468 17-237 (297)
148 3o4h_A Acylamino-acid-releasin 99.8 4.7E-20 1.6E-24 190.9 20.9 230 215-476 21-274 (582)
149 2z3z_A Dipeptidyl aminopeptida 99.8 5.7E-20 1.9E-24 194.8 21.9 234 216-477 82-388 (706)
150 1k32_A Tricorn protease; prote 99.8 1.3E-19 4.3E-24 200.2 25.1 240 206-475 194-458 (1045)
151 3u4y_A Uncharacterized protein 99.8 9.4E-19 3.2E-23 167.4 27.7 227 222-475 4-249 (331)
152 1jmx_B Amine dehydrogenase; ox 99.8 3.7E-19 1.2E-23 171.4 24.1 228 220-476 4-323 (349)
153 1ri6_A Putative isomerase YBHE 99.8 4.2E-18 1.4E-22 163.4 27.5 225 229-477 7-261 (343)
154 3scy_A Hypothetical bacterial 99.8 1.6E-17 5.3E-22 161.1 29.7 241 214-477 48-336 (361)
155 1z68_A Fibroblast activation p 99.8 1.5E-19 5E-24 192.1 13.0 235 220-477 20-343 (719)
156 3fvz_A Peptidyl-glycine alpha- 99.8 7E-17 2.4E-21 154.5 29.7 235 216-475 24-319 (329)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.8E-17 6.1E-22 161.1 24.9 240 214-477 38-340 (365)
158 1q7f_A NHL, brain tumor CG1071 99.8 5.1E-16 1.7E-20 145.2 33.4 242 212-476 26-278 (286)
159 3o4h_A Acylamino-acid-releasin 99.8 9.2E-18 3.1E-22 173.7 22.7 241 201-477 49-312 (582)
160 1z68_A Fibroblast activation p 99.8 1.3E-18 4.4E-23 184.8 16.4 242 209-478 50-391 (719)
161 4a5s_A Dipeptidyl peptidase 4 99.8 1.2E-17 4.3E-22 177.6 21.4 237 217-476 18-349 (740)
162 3hfq_A Uncharacterized protein 99.8 5.7E-16 1.9E-20 149.2 30.3 215 209-433 79-323 (347)
163 1jmx_B Amine dehydrogenase; ox 99.8 1.2E-16 4.1E-21 153.7 22.9 206 217-439 44-335 (349)
164 1pby_B Quinohemoprotein amine 99.7 9.4E-17 3.2E-21 153.5 21.5 220 228-476 2-267 (337)
165 3scy_A Hypothetical bacterial 99.7 2.7E-15 9.4E-20 145.2 31.0 232 211-449 95-360 (361)
166 3pe7_A Oligogalacturonate lyas 99.7 1.1E-15 3.9E-20 149.3 24.3 228 207-453 22-302 (388)
167 3azo_A Aminopeptidase; POP fam 99.7 3.5E-16 1.2E-20 164.4 21.9 243 209-477 17-322 (662)
168 3azo_A Aminopeptidase; POP fam 99.7 1.1E-15 3.8E-20 160.6 25.4 247 207-477 59-366 (662)
169 2xdw_A Prolyl endopeptidase; a 99.7 3.9E-15 1.3E-19 157.6 29.7 223 213-453 122-392 (710)
170 2dg1_A DRP35, lactonase; beta 99.7 3.4E-14 1.2E-18 135.8 32.9 237 206-469 35-301 (333)
171 3pe7_A Oligogalacturonate lyas 99.7 5.1E-16 1.8E-20 151.8 20.1 243 210-478 75-382 (388)
172 2gop_A Trilobed protease; beta 99.7 1.3E-14 4.3E-19 139.6 26.6 221 216-477 59-330 (347)
173 3e5z_A Putative gluconolactona 99.7 1.7E-14 5.9E-19 135.5 26.0 230 207-468 19-277 (296)
174 1jof_A Carboxy-CIS,CIS-muconat 99.7 3.1E-14 1.1E-18 138.1 27.9 194 275-477 40-290 (365)
175 2bkl_A Prolyl endopeptidase; m 99.7 5.7E-15 1.9E-19 155.9 24.4 221 213-453 118-375 (695)
176 2oiz_A Aromatic amine dehydrog 99.7 6.3E-14 2.1E-18 135.6 29.4 229 208-453 44-360 (361)
177 3c5m_A Oligogalacturonate lyas 99.7 1.5E-15 5.2E-20 148.7 17.2 214 218-453 38-295 (396)
178 1rwi_B Serine/threonine-protei 99.7 4.4E-14 1.5E-18 130.6 25.3 234 217-475 25-261 (270)
179 3c5m_A Oligogalacturonate lyas 99.6 2.1E-15 7.3E-20 147.6 16.7 260 207-477 71-381 (396)
180 2gop_A Trilobed protease; beta 99.6 7E-14 2.4E-18 134.4 25.5 218 217-477 16-290 (347)
181 4a5s_A Dipeptidyl peptidase 4 99.6 2.6E-14 8.8E-19 152.0 22.9 225 208-453 49-375 (740)
182 1q7f_A NHL, brain tumor CG1071 99.6 1.9E-13 6.6E-18 127.6 26.1 198 213-430 74-281 (286)
183 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-12 4.2E-17 123.7 31.5 227 210-453 12-280 (314)
184 3fvz_A Peptidyl-glycine alpha- 99.6 3.3E-13 1.1E-17 128.9 27.3 206 213-428 88-321 (329)
185 3no2_A Uncharacterized protein 99.6 5.7E-13 2E-17 123.5 24.7 207 226-453 4-225 (276)
186 3e5z_A Putative gluconolactona 99.6 5.8E-13 2E-17 125.0 25.1 207 208-432 61-289 (296)
187 2oiz_A Aromatic amine dehydrog 99.6 3.9E-13 1.3E-17 130.0 23.3 212 235-477 29-333 (361)
188 2dg1_A DRP35, lactonase; beta 99.6 2.4E-13 8.1E-18 129.9 21.6 230 216-475 6-260 (333)
189 2z2n_A Virginiamycin B lyase; 99.6 2.5E-11 8.5E-16 113.6 34.2 237 211-475 10-252 (299)
190 1xip_A Nucleoporin NUP159; bet 99.6 1.4E-13 4.7E-18 132.3 18.8 166 276-453 39-226 (388)
191 1yr2_A Prolyl oligopeptidase; 99.6 7.8E-13 2.7E-17 140.6 26.4 221 213-453 160-419 (741)
192 3g4e_A Regucalcin; six bladed 99.5 1.3E-11 4.4E-16 115.9 30.1 228 212-468 9-262 (297)
193 3dsm_A Uncharacterized protein 99.5 9.2E-12 3.2E-16 118.7 27.1 228 217-475 45-299 (328)
194 3hrp_A Uncharacterized protein 99.5 1.4E-11 4.7E-16 121.0 28.3 216 216-453 131-392 (409)
195 2z2n_A Virginiamycin B lyase; 99.5 1.3E-10 4.4E-15 108.6 33.1 219 214-453 55-278 (299)
196 2xdw_A Prolyl endopeptidase; a 99.5 4.9E-12 1.7E-16 133.8 25.9 197 274-478 124-366 (710)
197 1xip_A Nucleoporin NUP159; bet 99.5 1.3E-12 4.4E-17 125.6 18.4 182 217-417 39-232 (388)
198 2ghs_A AGR_C_1268P; regucalcin 99.5 1.2E-10 4E-15 110.9 30.5 222 216-469 49-293 (326)
199 3no2_A Uncharacterized protein 99.4 7.3E-11 2.5E-15 109.2 27.3 210 208-438 28-261 (276)
200 2qc5_A Streptogramin B lactona 99.4 5.2E-10 1.8E-14 104.5 33.6 234 214-475 18-257 (300)
201 1qks_A Cytochrome CD1 nitrite 99.4 1.2E-10 4.2E-15 118.5 30.7 234 216-475 197-535 (567)
202 1qks_A Cytochrome CD1 nitrite 99.4 1E-10 3.5E-15 119.1 29.6 224 225-476 165-419 (567)
203 3dr2_A Exported gluconolactona 99.4 4E-11 1.4E-15 113.0 24.9 233 205-469 34-298 (305)
204 1rwi_B Serine/threonine-protei 99.4 1.6E-11 5.4E-16 113.3 20.6 200 214-431 65-266 (270)
205 2bkl_A Prolyl endopeptidase; m 99.4 1.3E-11 4.5E-16 130.2 22.1 195 273-478 119-349 (695)
206 3iuj_A Prolyl endopeptidase; h 99.4 5.1E-11 1.7E-15 125.4 25.8 220 212-453 125-383 (693)
207 3dsm_A Uncharacterized protein 99.4 1.1E-10 3.8E-15 111.1 24.7 203 235-453 15-237 (328)
208 2qc5_A Streptogramin B lactona 99.4 1.8E-09 6.1E-14 100.8 31.6 219 214-453 60-284 (300)
209 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.1E-10 1.1E-14 107.0 25.4 201 214-429 69-299 (314)
210 1yr2_A Prolyl oligopeptidase; 99.3 1.8E-10 6.2E-15 122.3 24.9 193 275-477 163-392 (741)
211 2mad_H Methylamine dehydrogena 99.3 4E-09 1.4E-13 101.9 29.9 221 225-476 30-348 (373)
212 2qe8_A Uncharacterized protein 99.2 3.7E-09 1.3E-13 101.2 25.3 227 216-453 17-303 (343)
213 3hrp_A Uncharacterized protein 99.2 2.8E-09 9.7E-14 104.5 23.0 176 275-453 131-335 (409)
214 3sjl_D Methylamine dehydrogena 99.2 4.8E-09 1.6E-13 100.4 23.7 237 220-476 82-361 (386)
215 3dr2_A Exported gluconolactona 99.2 3.9E-09 1.3E-13 99.2 21.9 196 208-421 78-299 (305)
216 2hz6_A Endoplasmic reticulum t 99.2 9.1E-12 3.1E-16 120.6 3.4 200 226-452 8-215 (369)
217 3g4e_A Regucalcin; six bladed 99.1 2.2E-08 7.7E-13 93.6 25.8 189 214-418 52-261 (297)
218 2ghs_A AGR_C_1268P; regucalcin 99.1 3.8E-08 1.3E-12 93.4 27.5 186 215-418 89-291 (326)
219 2mad_H Methylamine dehydrogena 99.1 7.4E-08 2.5E-12 93.0 29.1 201 220-436 70-357 (373)
220 3c75_H MADH, methylamine dehyd 99.1 4.1E-08 1.4E-12 95.6 24.3 212 237-476 99-400 (426)
221 3sjl_D Methylamine dehydrogena 99.0 1E-07 3.5E-12 91.2 22.9 186 224-431 41-258 (386)
222 3hxj_A Pyrrolo-quinoline quino 99.0 3E-08 1E-12 94.0 19.2 215 227-475 107-321 (330)
223 1npe_A Nidogen, entactin; glyc 98.9 8.2E-07 2.8E-11 81.4 27.1 218 216-453 36-263 (267)
224 2hz6_A Endoplasmic reticulum t 98.9 1E-10 3.4E-15 113.3 0.6 179 285-475 8-189 (369)
225 3iuj_A Prolyl endopeptidase; h 98.9 3.8E-08 1.3E-12 103.5 19.8 191 274-475 128-354 (693)
226 3c75_H MADH, methylamine dehyd 98.9 3.4E-07 1.2E-11 89.1 24.9 219 220-451 122-423 (426)
227 2iwa_A Glutamine cyclotransfer 98.9 2.2E-06 7.4E-11 77.6 27.7 191 276-478 22-235 (266)
228 1mda_H Methylamine dehydrogena 98.9 5.1E-08 1.7E-12 93.3 17.6 225 238-494 47-361 (368)
229 2qe8_A Uncharacterized protein 98.9 1.5E-07 5.3E-12 89.9 20.8 194 275-476 17-276 (343)
230 2ece_A 462AA long hypothetical 98.9 2.4E-07 8.2E-12 89.3 21.4 225 225-466 93-399 (462)
231 2iwa_A Glutamine cyclotransfer 98.9 3.8E-07 1.3E-11 82.6 21.7 193 218-430 23-238 (266)
232 3nol_A Glutamine cyclotransfer 98.8 1.2E-06 4.1E-11 78.4 23.3 173 276-453 44-237 (262)
233 1mda_H Methylamine dehydrogena 98.8 4.7E-07 1.6E-11 86.7 19.9 216 220-450 69-366 (368)
234 3nol_A Glutamine cyclotransfer 98.8 7.8E-07 2.7E-11 79.6 19.9 184 213-418 38-244 (262)
235 3hxj_A Pyrrolo-quinoline quino 98.8 2.4E-08 8.2E-13 94.7 10.9 202 222-453 26-227 (330)
236 2fp8_A Strictosidine synthase; 98.8 1E-05 3.5E-10 76.3 28.8 223 211-448 14-291 (322)
237 1kb0_A Quinohemoprotein alcoho 98.7 9E-07 3.1E-11 92.4 22.1 229 226-475 127-504 (677)
238 3mbr_X Glutamine cyclotransfer 98.7 6.9E-06 2.4E-10 72.8 24.3 174 275-453 21-216 (243)
239 1yiq_A Quinohemoprotein alcoho 98.7 3.4E-06 1.2E-10 88.2 25.4 228 227-475 121-502 (689)
240 2p4o_A Hypothetical protein; p 98.7 1.5E-05 5E-10 74.6 27.1 225 216-468 32-278 (306)
241 1yiq_A Quinohemoprotein alcoho 98.7 2.1E-06 7.1E-11 89.8 22.5 175 278-453 238-530 (689)
242 3q7m_A Lipoprotein YFGL, BAMB; 98.7 5E-06 1.7E-10 80.3 23.6 177 286-475 188-375 (376)
243 3nok_A Glutaminyl cyclase; bet 98.7 3.1E-06 1.1E-10 75.7 19.7 173 275-453 55-247 (268)
244 1kb0_A Quinohemoprotein alcoho 98.7 1.9E-06 6.6E-11 89.9 21.5 175 278-453 246-532 (677)
245 3mbr_X Glutamine cyclotransfer 98.6 1.6E-05 5.3E-10 70.5 23.1 185 213-418 16-223 (243)
246 3nok_A Glutaminyl cyclase; bet 98.6 8.4E-06 2.9E-10 72.9 21.3 178 218-417 57-253 (268)
247 3q7m_A Lipoprotein YFGL, BAMB; 98.6 2.2E-05 7.4E-10 75.8 26.0 216 226-475 102-334 (376)
248 4a2l_A BT_4663, two-component 98.6 9.1E-05 3.1E-09 79.1 33.0 220 216-453 310-555 (795)
249 1fwx_A Nitrous oxide reductase 98.6 5.8E-07 2E-11 89.7 14.6 210 226-453 100-400 (595)
250 2xe4_A Oligopeptidase B; hydro 98.6 1.1E-05 3.7E-10 85.5 24.0 195 213-427 170-398 (751)
251 4a2l_A BT_4663, two-component 98.5 0.00027 9.3E-09 75.4 34.2 220 215-453 356-598 (795)
252 1npe_A Nidogen, entactin; glyc 98.4 0.00028 9.6E-09 64.3 26.7 171 276-448 37-216 (267)
253 2fp8_A Strictosidine synthase; 98.4 6.2E-05 2.1E-09 70.8 22.7 175 276-453 20-241 (322)
254 1fwx_A Nitrous oxide reductase 98.4 5.3E-05 1.8E-09 75.7 22.4 183 285-477 100-360 (595)
255 3qqz_A Putative uncharacterize 98.4 0.00055 1.9E-08 61.4 26.8 179 274-453 26-236 (255)
256 2ece_A 462AA long hypothetical 98.4 4.2E-05 1.4E-09 73.8 20.6 184 284-475 93-349 (462)
257 3v65_B Low-density lipoprotein 98.4 0.00018 6.3E-09 69.5 25.3 221 214-452 114-342 (386)
258 3v64_C Agrin; beta propeller, 98.3 0.00035 1.2E-08 66.5 26.2 220 215-452 72-299 (349)
259 1kv9_A Type II quinohemoprotei 98.3 3.8E-05 1.3E-09 80.0 20.3 228 227-476 117-486 (668)
260 3v9f_A Two-component system se 98.3 0.0011 3.7E-08 70.6 32.1 225 215-453 312-551 (781)
261 3v9f_A Two-component system se 98.3 0.00038 1.3E-08 74.1 28.0 217 216-453 363-595 (781)
262 3qqz_A Putative uncharacterize 98.3 0.0011 3.7E-08 59.5 25.9 198 210-426 21-250 (255)
263 3p5b_L Low density lipoprotein 98.2 0.0019 6.7E-08 62.5 29.5 227 210-450 106-342 (400)
264 1k3i_A Galactose oxidase precu 98.2 4.4E-05 1.5E-09 79.5 19.0 220 220-453 190-468 (656)
265 1ijq_A LDL receptor, low-densi 98.2 0.0019 6.5E-08 60.4 28.0 207 215-437 29-246 (316)
266 2xbg_A YCF48-like protein; pho 98.2 0.0014 4.9E-08 61.6 27.1 186 276-472 123-316 (327)
267 2ad6_A Methanol dehydrogenase 98.2 0.00031 1.1E-08 71.6 22.9 226 227-475 115-491 (571)
268 2p4o_A Hypothetical protein; p 98.1 0.0012 4.1E-08 61.4 24.4 175 275-453 32-224 (306)
269 1kv9_A Type II quinohemoprotei 98.1 0.00025 8.5E-09 73.9 21.6 175 278-453 233-513 (668)
270 3v64_C Agrin; beta propeller, 98.1 0.0041 1.4E-07 59.0 28.3 213 216-448 34-253 (349)
271 3tc9_A Hypothetical hydrolase; 98.1 0.0015 5.2E-08 64.0 26.0 197 217-433 138-374 (430)
272 2xe4_A Oligopeptidase B; hydro 98.1 0.00015 5.3E-09 76.6 19.6 194 276-478 175-398 (751)
273 3sov_A LRP-6, low-density lipo 98.1 0.0017 5.7E-08 60.8 24.5 218 216-450 35-260 (318)
274 4hw6_A Hypothetical protein, I 98.1 0.0017 5.7E-08 63.7 25.4 196 216-432 139-376 (433)
275 1k3i_A Galactose oxidase precu 98.0 0.00012 4.2E-09 76.2 17.7 222 216-453 243-523 (656)
276 2ad6_A Methanol dehydrogenase 98.0 0.00077 2.6E-08 68.7 23.1 173 279-453 239-519 (571)
277 2ism_A Putative oxidoreductase 98.0 0.0035 1.2E-07 59.6 26.3 222 215-453 30-327 (352)
278 3v65_B Low-density lipoprotein 98.0 0.0063 2.1E-07 58.6 27.6 211 218-448 79-296 (386)
279 3amr_A 3-phytase; beta-propell 98.0 0.0013 4.4E-08 61.4 21.4 191 226-437 39-272 (355)
280 1w6s_A Methanol dehydrogenase 98.0 0.00095 3.2E-08 68.1 21.7 151 230-395 124-350 (599)
281 1ijq_A LDL receptor, low-densi 97.9 0.011 3.8E-07 55.1 26.9 163 289-453 4-176 (316)
282 2xbg_A YCF48-like protein; pho 97.9 0.015 5.2E-07 54.5 30.6 218 215-453 35-262 (327)
283 3kya_A Putative phosphatase; s 97.9 0.011 3.6E-07 58.4 27.5 203 217-436 140-415 (496)
284 3m0c_C LDL receptor, low-densi 97.9 0.0078 2.7E-07 63.4 27.8 213 211-437 419-640 (791)
285 2g8s_A Glucose/sorbosone dehyd 97.9 0.019 6.4E-07 54.5 27.9 241 216-476 18-350 (353)
286 1flg_A Protein (quinoprotein e 97.9 0.0011 3.7E-08 67.7 20.3 173 279-453 250-541 (582)
287 3a9g_A Putative uncharacterize 97.9 0.021 7.1E-07 54.2 28.6 224 215-453 28-324 (354)
288 3tc9_A Hypothetical hydrolase; 97.8 0.00084 2.9E-08 65.8 18.3 152 275-428 137-300 (430)
289 2p9w_A MAL S 1 allergenic prot 97.8 0.0022 7.6E-08 59.3 19.0 153 276-429 14-215 (334)
290 3amr_A 3-phytase; beta-propell 97.7 0.011 3.6E-07 55.3 23.0 182 285-476 39-261 (355)
291 1n7d_A LDL receptor, low-densi 97.7 0.00027 9.3E-09 73.8 13.6 219 216-449 406-634 (699)
292 3p5b_L Low density lipoprotein 97.7 0.016 5.5E-07 56.0 25.2 165 288-453 85-258 (400)
293 4hw6_A Hypothetical protein, I 97.7 0.0088 3E-07 58.5 22.4 152 275-428 139-303 (433)
294 1w6s_A Methanol dehydrogenase 97.6 0.014 4.7E-07 59.6 24.3 202 227-437 62-350 (599)
295 1flg_A Protein (quinoprotein e 97.6 0.0032 1.1E-07 64.2 19.1 83 336-418 465-549 (582)
296 3sov_A LRP-6, low-density lipo 97.6 0.022 7.5E-07 53.1 23.4 159 295-453 12-178 (318)
297 3m0c_C LDL receptor, low-densi 97.5 0.07 2.4E-06 56.2 28.3 158 275-432 424-592 (791)
298 4a0p_A LRP6, LRP-6, low-densit 97.5 0.083 2.8E-06 54.2 27.7 201 216-436 37-244 (628)
299 3s94_A LRP-6, low-density lipo 97.4 0.017 5.7E-07 59.3 21.8 205 215-436 39-250 (619)
300 2p9w_A MAL S 1 allergenic prot 97.3 0.018 6.2E-07 53.2 18.1 140 313-453 10-197 (334)
301 3kya_A Putative phosphatase; s 97.1 0.033 1.1E-06 54.9 18.8 151 276-427 140-339 (496)
302 3s94_A LRP-6, low-density lipo 97.1 0.34 1.2E-05 49.5 26.7 157 275-431 40-204 (619)
303 2xzh_A Clathrin heavy chain 1; 97.0 0.2 7E-06 45.9 25.0 209 221-451 72-312 (365)
304 3pbp_A Nucleoporin NUP82; beta 96.9 0.12 4.1E-06 49.3 20.0 139 325-472 30-206 (452)
305 2ism_A Putative oxidoreductase 96.9 0.29 1E-05 46.1 22.9 142 276-420 32-224 (352)
306 3sre_A PON1, serum paraoxonase 96.8 0.33 1.1E-05 45.7 23.3 173 277-453 52-279 (355)
307 3das_A Putative oxidoreductase 96.7 0.39 1.3E-05 44.9 31.5 234 208-453 24-320 (347)
308 4a0p_A LRP6, LRP-6, low-densit 96.7 0.73 2.5E-05 47.2 27.9 210 216-438 340-558 (628)
309 1n7d_A LDL receptor, low-densi 96.5 0.0049 1.7E-07 64.3 8.4 159 295-453 385-552 (699)
310 3pbp_A Nucleoporin NUP82; beta 96.4 0.038 1.3E-06 52.7 12.9 124 216-342 66-208 (452)
311 1tl2_A L10, protein (tachylect 96.4 0.24 8.3E-06 42.7 16.7 137 276-420 42-201 (236)
312 3sre_A PON1, serum paraoxonase 96.3 0.71 2.4E-05 43.4 28.0 230 209-453 43-326 (355)
313 1bpo_A Protein (clathrin); cla 96.2 0.93 3.2E-05 43.4 26.3 212 220-453 70-313 (494)
314 3s25_A Hypothetical 7-bladed b 96.1 0.43 1.5E-05 43.9 18.2 158 280-453 58-235 (302)
315 2g8s_A Glucose/sorbosone dehyd 96.1 0.22 7.5E-06 47.0 16.6 139 276-415 19-214 (353)
316 3a9g_A Putative uncharacterize 96.0 1.1 3.7E-05 42.2 23.7 141 276-418 30-217 (354)
317 2vpj_A Kelch-like protein 12; 95.9 0.36 1.2E-05 44.1 17.0 145 285-433 62-235 (301)
318 1xi4_A Clathrin heavy chain; a 95.9 0.33 1.1E-05 53.5 18.2 208 222-451 72-311 (1630)
319 2xn4_A Kelch-like protein 2; s 95.9 0.38 1.3E-05 44.0 16.8 146 285-433 108-280 (302)
320 3ii7_A Kelch-like protein 7; p 95.7 0.45 1.5E-05 43.6 16.6 145 285-433 55-229 (306)
321 2vpj_A Kelch-like protein 12; 95.6 0.68 2.3E-05 42.2 17.5 144 285-432 112-281 (301)
322 1cru_A Protein (soluble quinop 95.6 1.6 5.4E-05 42.7 20.7 103 316-418 27-163 (454)
323 1tl2_A L10, protein (tachylect 95.5 0.41 1.4E-05 41.3 13.8 132 316-453 41-194 (236)
324 2be1_A Serine/threonine-protei 95.4 0.079 2.7E-06 49.5 10.1 188 228-434 11-236 (339)
325 4asc_A Kelch repeat and BTB do 95.3 1.5 5E-05 40.3 18.9 148 283-433 43-225 (315)
326 1cru_A Protein (soluble quinop 95.2 1.2 4E-05 43.6 18.2 99 276-374 28-160 (454)
327 3ei3_A DNA damage-binding prot 95.1 5.2 0.00018 44.1 30.9 183 215-416 553-754 (1158)
328 2xn4_A Kelch-like protein 2; s 95.0 1.6 5.4E-05 39.7 17.9 146 285-433 61-233 (302)
329 3ii7_A Kelch-like protein 7; p 95.0 1.1 3.9E-05 40.8 16.8 187 226-432 55-275 (306)
330 1bpo_A Protein (clathrin); cla 94.9 2.9 9.8E-05 40.1 24.1 201 216-430 106-332 (494)
331 3ei3_A DNA damage-binding prot 94.9 5.9 0.0002 43.6 27.4 185 275-475 426-633 (1158)
332 3qhy_B Beta-lactamase inhibito 94.4 2.3 7.7E-05 38.5 16.8 178 276-475 64-243 (282)
333 3ott_A Two-component system se 94.4 5.9 0.0002 41.4 31.0 210 216-453 63-291 (758)
334 3ott_A Two-component system se 94.3 6 0.0002 41.4 31.5 187 217-426 104-304 (758)
335 2woz_A Kelch repeat and BTB do 94.3 3.2 0.00011 38.0 19.5 147 285-434 109-292 (318)
336 3s25_A Hypothetical 7-bladed b 94.3 3.2 0.00011 37.9 18.3 153 284-453 23-196 (302)
337 1zgk_A Kelch-like ECH-associat 94.1 1.1 3.9E-05 40.9 14.6 144 285-432 121-290 (308)
338 4asc_A Kelch repeat and BTB do 94.0 3.6 0.00012 37.6 18.2 146 285-433 98-281 (315)
339 2xzh_A Clathrin heavy chain 1; 93.8 4.1 0.00014 37.5 24.9 201 216-430 107-333 (365)
340 3das_A Putative oxidoreductase 93.6 4.7 0.00016 37.6 22.8 198 214-417 78-326 (347)
341 1zgk_A Kelch-like ECH-associat 93.2 4.8 0.00016 36.6 17.8 145 285-433 70-244 (308)
342 2woz_A Kelch repeat and BTB do 93.2 3.9 0.00013 37.4 16.6 148 283-433 54-235 (318)
343 2uvk_A YJHT; unknown function, 93.2 0.83 2.8E-05 42.9 12.1 100 285-385 65-224 (357)
344 2uvk_A YJHT; unknown function, 93.1 1.9 6.7E-05 40.2 14.6 138 296-436 168-349 (357)
345 2be1_A Serine/threonine-protei 93.1 0.23 7.9E-06 46.3 7.6 140 287-426 11-181 (339)
346 2zwa_A Leucine carboxyl methyl 91.8 3.1 0.00011 43.2 15.1 106 284-389 499-637 (695)
347 2zwa_A Leucine carboxyl methyl 91.5 9.7 0.00033 39.4 18.5 197 225-433 396-639 (695)
348 1uuj_A Platelet-activating fac 90.4 0.1 3.4E-06 37.2 1.5 30 7-36 11-40 (88)
349 3qhy_B Beta-lactamase inhibito 89.2 7.6 0.00026 34.9 13.7 178 276-475 25-204 (282)
350 1xi4_A Clathrin heavy chain; a 88.9 17 0.0006 40.5 17.8 177 216-406 106-308 (1630)
351 4gq2_M Nucleoporin NUP120; bet 82.6 9.6 0.00033 41.1 12.2 37 400-436 237-273 (950)
352 2wg3_C Hedgehog-interacting pr 80.6 29 0.00098 33.8 13.8 105 316-420 14-160 (463)
353 2wg3_C Hedgehog-interacting pr 77.4 54 0.0019 31.8 30.3 113 216-335 14-158 (463)
354 4gq2_M Nucleoporin NUP120; bet 74.4 4.6 0.00016 43.5 6.7 36 216-251 236-271 (950)
355 4fhn_B Nucleoporin NUP120; pro 73.9 37 0.0013 37.4 13.8 37 400-436 239-275 (1139)
356 3kci_A Probable E3 ubiquitin-p 72.4 65 0.0022 30.2 22.0 231 228-475 11-290 (389)
357 4hvt_A Ritya.17583.B, post-pro 70.7 1E+02 0.0035 31.8 21.4 223 219-453 132-408 (711)
358 3b7f_A Glycosyl hydrolase, BNR 70.7 70 0.0024 29.9 19.8 50 287-337 23-77 (394)
359 3sbq_A Nitrous-oxide reductase 70.2 20 0.00069 35.6 9.3 126 216-347 323-479 (638)
360 3b7f_A Glycosyl hydrolase, BNR 62.5 1E+02 0.0034 28.8 20.0 173 275-452 55-289 (394)
361 4fhn_B Nucleoporin NUP120; pro 59.6 21 0.00071 39.4 8.2 39 317-355 239-277 (1139)
362 3f7f_A Nucleoporin NUP120; nuc 58.3 16 0.00055 37.5 6.4 38 399-438 222-259 (729)
363 3sbq_A Nitrous-oxide reductase 57.1 31 0.0011 34.3 7.9 73 274-346 322-408 (638)
364 3mvd_K Regulator of chromosome 55.3 1.4E+02 0.0048 28.2 28.3 236 218-475 77-371 (423)
365 3zwu_A Alkaline phosphatase PH 52.7 42 0.0014 33.7 8.4 54 400-453 477-543 (592)
366 1suu_A DNA gyrase subunit A; t 51.2 1.4E+02 0.0048 27.0 26.5 193 225-428 6-230 (312)
367 3q6k_A 43.2 kDa salivary prote 51.0 1.6E+02 0.0055 27.6 12.0 89 338-427 124-251 (381)
368 4a9v_A PHOX; hydrolase, beta-p 50.5 69 0.0024 31.9 9.3 62 399-467 476-550 (592)
369 3l6v_A GYRA, DNA gyrase subuni 50.0 1.6E+02 0.0056 27.4 22.4 231 224-471 4-309 (370)
370 3no0_A DNA gyrase subunit A; D 47.5 1.5E+02 0.0051 26.2 21.9 153 274-428 67-245 (276)
371 4a9v_A PHOX; hydrolase, beta-p 46.7 91 0.0031 31.1 9.5 59 359-417 477-549 (592)
372 3f7f_A Nucleoporin NUP120; nuc 46.4 31 0.0011 35.4 6.3 36 318-355 224-259 (729)
373 3kci_A Probable E3 ubiquitin-p 41.3 2.2E+02 0.0076 26.4 28.0 231 228-476 63-343 (389)
374 2d68_A FOP, FGFR1OP; alpha hel 40.2 11 0.00037 26.5 1.3 29 9-37 21-49 (82)
375 2l1n_A Uncharacterized protein 38.3 12 0.0004 27.9 1.3 18 4-24 18-35 (120)
376 2dk5_A DNA-directed RNA polyme 38.2 7 0.00024 28.2 0.1 50 3-60 17-67 (91)
377 3zwu_A Alkaline phosphatase PH 36.0 1.2E+02 0.0043 30.3 8.8 57 360-416 478-548 (592)
378 1zi0_A DNA gyrase subunit A; b 35.5 2.4E+02 0.0084 25.2 23.7 192 225-427 1-224 (307)
379 3uc1_A DNA gyrase subunit A; D 34.4 2.7E+02 0.0091 25.3 22.4 191 276-474 43-275 (327)
380 1dum_A Magainin 2; antibiotic, 30.5 8.5 0.00029 19.1 -0.3 12 22-33 5-16 (26)
381 2zux_A YESW protein; beta-prop 30.5 4.1E+02 0.014 26.3 22.5 42 396-437 361-408 (591)
382 3no0_A DNA gyrase subunit A; D 29.7 2.9E+02 0.0099 24.3 20.8 189 276-473 25-239 (276)
383 1xkm_A Distinctin chain A; por 29.6 36 0.0012 16.9 1.8 15 43-57 3-19 (26)
384 1sfu_A 34L protein; protein/Z- 26.9 29 0.001 23.8 1.7 20 4-24 41-60 (75)
385 2jp7_A MRNA export factor MEX6 25.9 18 0.00062 23.3 0.5 29 15-52 26-56 (57)
386 2fwt_A DHC, diheme cytochrome 24.8 29 0.00098 26.6 1.5 17 3-20 46-62 (125)
387 2cp8_A NEXT to BRCA1 gene 1 pr 24.7 43 0.0015 21.3 2.0 24 2-25 1-24 (54)
388 3mez_A Mannose-specific lectin 24.3 2.1E+02 0.0073 21.0 6.6 13 319-331 22-34 (111)
389 4h3o_A Lectin; cadmium, plant 23.6 2.1E+02 0.0073 20.7 9.1 14 403-416 86-99 (105)
390 2zyz_A Putative uncharacterize 22.8 42 0.0014 25.3 2.1 52 6-57 21-79 (116)
391 3q6k_A 43.2 kDa salivary prote 22.4 4.7E+02 0.016 24.3 13.1 82 216-305 220-306 (381)
392 3mez_B Mannose-specific lectin 22.4 2.3E+02 0.008 20.8 9.7 14 413-426 92-105 (113)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.4e-44 Score=358.61 Aligned_cols=266 Identities=22% Similarity=0.375 Sum_probs=237.6
Q ss_pred CCCcccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 187 PEPMDIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
|....+++.+.+..+.++ ......+.+|.+.|.+++|+|++++|++|+.|++|++||+.+....
T Consensus 118 p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~------------ 185 (410)
T 1vyh_C 118 PVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECI------------ 185 (410)
T ss_dssp SSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEE------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCcee------------
Confidence 333345555555555553 3457889999999999999999999999999999999999875532
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
....+|...|.+++|+|++++|++|+.|+.|++||+. +.....+.+|...|.++.|+|++.+|++|+.|++|++
T Consensus 186 -----~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~v 260 (410)
T 1vyh_C 186 -----RTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRV 260 (410)
T ss_dssp -----ECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -----EEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEE
Confidence 2234567889999999999999999999999999986 5667788999999999999999999999999999999
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecC---------------------CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCc
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRN---------------------NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 400 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~---------------------~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~ 400 (502)
||++++.+...+..|...|.++.|++ +..+++|+.|+.|++||++++.++.++.+|...
T Consensus 261 wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~ 340 (410)
T 1vyh_C 261 WVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNW 340 (410)
T ss_dssp EETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSC
T ss_pred EECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCc
Confidence 99999999999999999999999987 346999999999999999999999999999999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|++++|+|+|++|++|+.||+|+|||+.+++++..+.+|...|++++|+|++. .+++++.|+.+++|.+
T Consensus 341 v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~-------~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 341 VRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAP-------YVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSSS-------CEEEEETTSEEEEEC-
T ss_pred EEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCCC-------EEEEEeCCCcEEEEeC
Confidence 99999999999999999999999999999999999999999999999999998 7889999999999974
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.1e-40 Score=316.15 Aligned_cols=263 Identities=22% Similarity=0.380 Sum_probs=233.3
Q ss_pred ccccCCCCceeeeCC---Cc---eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEe
Q 010754 191 DIATTSASESFEIPN---SD---VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLK 264 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~---~~---~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
.+++++.+..++++. .. ...+.+|...|.+++|+|++.++++|+.|++|++||+.+++...
T Consensus 50 ~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~------------- 116 (321)
T 3ow8_A 50 TVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK------------- 116 (321)
T ss_dssp EEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-------------
T ss_pred EEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE-------------
Confidence 355566665555542 22 34689999999999999999999999999999999998865321
Q ss_pred eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 265 HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 265 ~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
.+ ..+...+.+++|+|++++|++|+.||.|++|++. +.....+..|...|.+++|+|++++|++|+.||.|++||
T Consensus 117 ~~----~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd 192 (321)
T 3ow8_A 117 SI----DAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFD 192 (321)
T ss_dssp EE----ECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred EE----eCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 11 2345678899999999999999999999999986 456667788899999999999999999999999999999
Q ss_pred cCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
+++++.+..+..|..+|.+++|+|++ .+++++.|+.|++||++++..+..+.+|...|.+++|+|++.+|++|+.||+|
T Consensus 193 ~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v 272 (321)
T 3ow8_A 193 IATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV 272 (321)
T ss_dssp TTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred CCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE
Confidence 99999999999999999999998865 58899999999999999999999999999999999999999999999999999
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|||+.+++++..+.+|...|++++|+|+|. .|++++.|+.+++|++.
T Consensus 273 ~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~-------~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 273 KVWDVGTRTCVHTFFDHQDQVWGVKYNGNGS-------KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETTCCEEEEECC
T ss_pred EEEeCCCCEEEEEEcCCCCcEEEEEECCCCC-------EEEEEeCCCeEEEEeCC
Confidence 9999999999999999999999999999998 78888999999999864
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-39 Score=309.12 Aligned_cols=246 Identities=21% Similarity=0.328 Sum_probs=219.9
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+++.+|.+.|++++|+|++++|++|+.||+|++||+.++... . ....|...|.+++|+|++
T Consensus 5 ~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~-------------~----~~~~~~~~v~~~~~~~~~ 67 (304)
T 2ynn_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEV-------------R----SIQVTETPVRAGKFIARK 67 (304)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-------------E----EEECCSSCEEEEEEEGGG
T ss_pred eEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcee-------------E----EeeccCCcEEEEEEeCCC
Confidence 45789999999999999999999999999999999999876421 1 122456789999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~ 364 (502)
++|++|+.|+.|++||+. +.....+.+|...|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++
T Consensus 68 ~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~ 147 (304)
T 2ynn_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (304)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEE
Confidence 999999999999999976 5677788999999999999999999999999999999999887 45667888999999999
Q ss_pred ecCC--CEEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 365 WRNN--VSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 365 ~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp--~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
|+|. ..|++|+.|+.|++||++...+...+. +|...+..+.|+| ++.+|++|+.||+|+|||+++++++..+.+|
T Consensus 148 ~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h 227 (304)
T 2ynn_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (304)
T ss_dssp ECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCC
Confidence 9873 579999999999999999887766664 4567899999987 7789999999999999999999999999999
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
...|.+++|+|++. .+++++.|+.+++|+.
T Consensus 228 ~~~v~~~~~~p~~~-------~l~s~s~Dg~i~iWd~ 257 (304)
T 2ynn_A 228 MSNVSFAVFHPTLP-------IIISGSEDGTLKIWNS 257 (304)
T ss_dssp SSCEEEEEECSSSS-------EEEEEETTSCEEEEET
T ss_pred CCCEEEEEECCCCC-------EEEEEcCCCeEEEEEC
Confidence 99999999999998 7888889999999974
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-39 Score=323.19 Aligned_cols=245 Identities=24% Similarity=0.379 Sum_probs=226.1
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
...+.+|.++|++++|+|++.+|++|+.||+|+|||+.+++.. ....+|...|++++|+|+++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-----------------~~l~~h~~~V~~v~~~~~~~ 163 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-----------------RTLKGHTDSVQDISFDHSGK 163 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-----------------EEECCCSSCEEEEEECTTSS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-----------------EEEeccCCcEEEEEEcCCCC
Confidence 4568899999999999999999999999999999999887632 12245678899999999999
Q ss_pred EEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 288 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
+|++|+.||.|++||+.+ .....+.+|...|.+++|+|++++|++|+.|++|++||++++.++..+.+|...+.++.|+
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEEC
Confidence 999999999999999875 5667888999999999999999999999999999999999999999999999999999997
Q ss_pred CC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCC--------------------CCEEEEEeCCCcEEEE
Q 010754 367 NN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--------------------GSLLASCSDDVTAKIW 425 (502)
Q Consensus 367 ~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~--------------------g~~las~s~dg~i~iw 425 (502)
++ ..+++++.|+.|++||+.++.....+.+|...|.+++|+|+ |.+|++|+.||+|++|
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iw 323 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMW 323 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEE
T ss_pred CCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEE
Confidence 75 45889999999999999999999999999999999999996 6799999999999999
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|++++.++..+.+|...|++++|+|+|. .+++++.|+.+++|+.
T Consensus 324 d~~~~~~~~~~~~h~~~v~~v~~~~~g~-------~l~s~s~D~~i~vwd~ 367 (410)
T 1vyh_C 324 DVSTGMCLMTLVGHDNWVRGVLFHSGGK-------FILSCADDKTLRVWDY 367 (410)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECSSSS-------CEEEEETTTEEEEECC
T ss_pred ECCCCceEEEEECCCCcEEEEEEcCCCC-------EEEEEeCCCeEEEEEC
Confidence 9999999999999999999999999998 7888999999999974
No 5
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.2e-39 Score=310.84 Aligned_cols=244 Identities=15% Similarity=0.225 Sum_probs=208.0
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
..|...|.+++|+|++ .|++|+.||+|+|||+.+++... .......+|...|++++|+|+|++|++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~-------------~~~~~~~~H~~~V~~v~~spdg~~l~s 144 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLI-------------VSKFCKYEHDDIVSTVSVLSSGTQAVS 144 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCE-------------EEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCcee-------------EeeccccCCCCCEEEEEECCCCCEEEE
Confidence 3466789999999985 68899999999999998876421 111223467889999999999999999
Q ss_pred EECCCeEEEEECC-CceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEEee--ccCCeEEEEecC
Q 010754 292 GSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEF--HSGPTLDVDWRN 367 (502)
Q Consensus 292 ~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~v~~~~ 367 (502)
|+.||.|++||+. +..+..+.+|...|.+++|+|++ .+|++++.|++|++||+++++....+.. +...+.+++|++
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p 224 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHP 224 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECS
T ss_pred EeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecC
Confidence 9999999999986 56778899999999999999988 4789999999999999999998877643 455789999976
Q ss_pred C--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 368 N--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 368 ~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
. ..+++|+.|+.|++||+++++++.++.+|...|++++|+|++ ++||+|+.||+|+|||+.+++++ .+.+|...|+
T Consensus 225 ~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~ 303 (344)
T 4gqb_B 225 QQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVR 303 (344)
T ss_dssp SCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEE
T ss_pred CCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEE
Confidence 3 468899999999999999999999999999999999999998 58999999999999999998865 5678999999
Q ss_pred EEEEccCCCCCCCCCccEE-EEeecCceEEEEee
Q 010754 445 TIRWSPTGSGTNNPNQQLI-LARLIPYFLYWICS 477 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~-las~~~~~~iw~~~ 477 (502)
+++|+|+|. .++ +++.|+.+++|...
T Consensus 304 ~v~~sp~~~-------~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 304 DATWSPLNH-------SLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEECSSST-------TEEEEEETTSCEEEEECC
T ss_pred EEEEeCCCC-------eEEEEEcCCCeEEEEECC
Confidence 999999987 444 67779999999764
No 6
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-38 Score=307.55 Aligned_cols=263 Identities=20% Similarity=0.350 Sum_probs=223.8
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE--------------------Ee
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV--------------------LK 264 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~--------------------~~ 264 (502)
......|++|.+.|++++|+|++++|++|+.||+|+|||+.++.....+..+...+.. +.
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw 124 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIY 124 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEE
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEE
Confidence 3456889999999999999999999999999999999999876543322111110000 00
Q ss_pred ---------eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEe
Q 010754 265 ---------HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGS 334 (502)
Q Consensus 265 ---------~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~ 334 (502)
.......+|...|.++.|++++. +++++.||.|++||+. +.....+.+|...|.+++|+|++++|++|+
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~ 203 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGA 203 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEe
Confidence 01112346778899999988765 8899999999999976 566778889999999999999999999999
Q ss_pred cCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCCC
Q 010754 335 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTGS 411 (502)
Q Consensus 335 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g~ 411 (502)
.|++|++||++++.++..+..|...|.+++|+|+ ..|++++.|+.|++||+++++.+..+..+ ...|++++|+|+|+
T Consensus 204 ~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 283 (340)
T 1got_B 204 CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGR 283 (340)
T ss_dssp TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS
T ss_pred CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCC
Confidence 9999999999999999999999999999999875 56899999999999999999888777532 34799999999999
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 412 LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+|++|+.||.|++||+.+++.+..+.+|..+|.+++|+|+|. .+++++.|+.+++|+
T Consensus 284 ~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~-------~l~s~s~D~~i~iWd 340 (340)
T 1got_B 284 LLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGM-------AVATGSWDSFLKIWN 340 (340)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS-------CEEEEETTSCEEEEC
T ss_pred EEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCC-------EEEEEcCCccEEecC
Confidence 999999999999999999999999999999999999999998 788899999999994
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.5e-38 Score=308.84 Aligned_cols=263 Identities=21% Similarity=0.380 Sum_probs=224.2
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCc-----------------------eeEE
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPL-----------------------NVLV 262 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~-----------------------~~~~ 262 (502)
...+.|+||.+.|++++|+|++++|+||+.||+|+|||..++........+.. .+..
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~ 134 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYP 134 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEE
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEE
Confidence 45688999999999999999999999999999999999877653221111100 0000
Q ss_pred Ee--------eecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec--CCCEEE
Q 010754 263 LK--------HVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLL 331 (502)
Q Consensus 263 ~~--------~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~--~~~~l~ 331 (502)
+. ........|...|.+++|+|++..|++|+.||.|++||++ +.....+.+|...|.+++|+| ++++|+
T Consensus 135 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~ 214 (354)
T 2pbi_B 135 LTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFV 214 (354)
T ss_dssp CCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEE
T ss_pred EeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEE
Confidence 00 0011223578889999999999999999999999999986 566778899999999999987 568999
Q ss_pred EEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcC
Q 010754 332 TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDP 408 (502)
Q Consensus 332 s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp 408 (502)
+|+.||+|++||+++++++..+..|...|.+++|+|+ ..|++++.|++|++||++.+..+..+..+ ...+++++|+|
T Consensus 215 sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~ 294 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDFSL 294 (354)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECT
T ss_pred EEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeC
Confidence 9999999999999999999999999999999999875 56899999999999999998887777644 34789999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 409 TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 409 ~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+|++|++|+.|+.|+|||+.+++.+..+.+|..+|++++|+|+|. .|++++.|+.+++|.
T Consensus 295 ~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~-------~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 295 SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGT-------AFCSGSWDHTLRVWA 354 (354)
T ss_dssp TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-------CEEEEETTSEEEEEC
T ss_pred CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCC-------EEEEEcCCCCEEecC
Confidence 999999999999999999999999999999999999999999998 788899999999994
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=305.25 Aligned_cols=247 Identities=17% Similarity=0.346 Sum_probs=222.1
Q ss_pred eEEeccCCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 208 VTILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
.+.+++|.+.|++++|+|+ +.+|+||+.|++|+||++.+.... ......+|...|.+++|+
T Consensus 25 ~~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~---------------~~~~l~gh~~~v~~~~~~ 89 (321)
T 3ow8_A 25 FKQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLD---------------LQWSLEGHQLGVVSVDIS 89 (321)
T ss_dssp EEETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEE---------------EEEEECCCSSCEEEEEEC
T ss_pred eeecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCee---------------eeeeeccCCCCEEEEEEC
Confidence 4667899999999999985 569999999999999998764310 112235678899999999
Q ss_pred CCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 284 GEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
+++.++++|+.|+.|++||+. +.....+..|...+.+++|+|++++|++++.|+.|++||+++++....+..+...+.+
T Consensus 90 ~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~ 169 (321)
T 3ow8_A 90 HTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILS 169 (321)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEE
T ss_pred CCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEE
Confidence 999999999999999999986 4666778888899999999999999999999999999999999999999999999999
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 363 VDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 363 v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
++|+|++ .+++++.|+.|++||+.+++.+..+.+|...|++++|+|++++|++|+.||.|+|||+++++++..+.+|..
T Consensus 170 ~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~ 249 (321)
T 3ow8_A 170 IAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHAS 249 (321)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSS
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCC
Confidence 9998765 588999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.|.+++|+|+|. .+++++.|+.+++|+.
T Consensus 250 ~v~~~~~sp~~~-------~l~s~s~D~~v~iwd~ 277 (321)
T 3ow8_A 250 WVLNVAFCPDDT-------HFVSSSSDKSVKVWDV 277 (321)
T ss_dssp CEEEEEECTTSS-------EEEEEETTSCEEEEET
T ss_pred ceEEEEECCCCC-------EEEEEeCCCcEEEEeC
Confidence 999999999998 7888999999999974
No 9
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=6.2e-38 Score=296.95 Aligned_cols=248 Identities=25% Similarity=0.400 Sum_probs=210.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC--
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-- 285 (502)
+.++.+|.+.|++++|+|+|++||+|+.|++|+||++.+.... ......+|...|++++|+++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~---------------~~~~l~gH~~~V~~v~~s~~~~ 66 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK---------------LIDTLTGHEGPVWRVDWAHPKF 66 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC---------------CCEEECCCSSCEEEEEECCGGG
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE---------------EEEEEccccCCeEEEEecCCCc
Confidence 3568899999999999999999999999999999998753210 11223467889999999874
Q ss_pred CCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCCc--eEEEEeeccC
Q 010754 286 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSG 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~ 358 (502)
+++|++|+.||+|+|||+... ....+..|...|.+++|+|+ +.+|++++.|++|++||++++. ....+..|..
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~ 146 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC
Confidence 899999999999999998753 45667889999999999997 8899999999999999998763 2456778999
Q ss_pred CeEEEEecCC--------------CEEEEEeCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCCC---CEEEEEe
Q 010754 359 PTLDVDWRNN--------------VSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTG---SLLASCS 417 (502)
Q Consensus 359 ~v~~v~~~~~--------------~~~~~~~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~g---~~las~s 417 (502)
.+.++.|+|. ..|++++.|+.|++||++++. ....+.+|...|.+++|+|++ .+||+|+
T Consensus 147 ~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s 226 (297)
T 2pm7_B 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVS 226 (297)
T ss_dssp CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEE
Confidence 9999999885 479999999999999998876 567889999999999999985 8999999
Q ss_pred CCCcEEEEECCCCe---eEEEe--ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 418 DDVTAKIWNMKQDK---YVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 418 ~dg~i~iwd~~~~~---~~~~~--~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.|++|+|||+++.. ....+ ..|...|++++|+|+|. .|++++.|+.+++|...
T Consensus 227 ~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-------~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALSGGDNKVTLWKEN 284 (297)
T ss_dssp TTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-------CEEEEETTSCEEEEEEC
T ss_pred CCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCC-------EEEEEcCCCcEEEEEEC
Confidence 99999999997643 12233 46888999999999998 78888889999999754
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.9e-37 Score=295.46 Aligned_cols=248 Identities=23% Similarity=0.360 Sum_probs=215.6
Q ss_pred eEEeccCCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+|.||.+.|++++|+|++ ++|++|+.|++|++|++...... .........+|...|++++|+|+|
T Consensus 10 ~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~------------~~~~~~~~~~h~~~v~~~~~s~dg 77 (319)
T 3frx_A 10 RGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK------------FGVPVRSFKGHSHIVQDCTLTADG 77 (319)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE------------EEEEEEEEECCSSCEEEEEECTTS
T ss_pred EEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc------------ccccceEEeCCcccEEEEEECCCC
Confidence 46789999999999999964 89999999999999998643210 011122345678899999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
++|++|+.|+.|++||+. +.....+.+|...|.+++|+|++.+|++|+.|++|++||++ +.++..+..|...+.++.|
T Consensus 78 ~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 78 AYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEEEE
Confidence 999999999999999986 56677889999999999999999999999999999999986 5677888899999999999
Q ss_pred cCCC-------EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 366 RNNV-------SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 366 ~~~~-------~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
.+.. .+++++.|+.|++||+.+.+....+.+|...|++++|+|+|++|++|+.||.|+|||+.+++++..+..
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 236 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSA 236 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 7743 699999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+ .+|.+++|+|+|. ++.++.+..+++|...
T Consensus 237 ~-~~v~~~~~sp~~~--------~la~~~~~~i~v~~~~ 266 (319)
T 3frx_A 237 Q-DEVFSLAFSPNRY--------WLAAATATGIKVFSLD 266 (319)
T ss_dssp C-SCEEEEEECSSSS--------EEEEEETTEEEEEEET
T ss_pred C-CcEEEEEEcCCCC--------EEEEEcCCCcEEEEeC
Confidence 4 5899999999987 4555556778898653
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-37 Score=301.89 Aligned_cols=250 Identities=30% Similarity=0.482 Sum_probs=214.9
Q ss_pred ceEEeccCCC-ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTS-EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~-~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+.+|.+ .|++++|+|+|++||+|+.|++|+||++.++... . ......+|...|++++|+|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~-----------~---~~~~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWI-----------C---KSVLSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEE-----------E---EEEECSSCSSCEEEEEECTT
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcce-----------e---eeeeccccCCcEEEEEECCC
Confidence 4678899998 9999999999999999999999999998765321 0 01112467789999999999
Q ss_pred CCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc---eEEEEeeccCC
Q 010754 286 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE---WKQQFEFHSGP 359 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~~~~~ 359 (502)
|++|++|+.|+.|++|+.... ....+.+|...|.+++|+|++++|++|+.|++|++||++++. ++..+..|...
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~ 152 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQD 152 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSC
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCC
Confidence 999999999999999997643 466788999999999999999999999999999999998764 45667789999
Q ss_pred eEEEEecCCC-EEEEEeCCCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-------
Q 010754 360 TLDVDWRNNV-SFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ------- 429 (502)
Q Consensus 360 v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~------- 429 (502)
|.+++|+|++ .+++++.|+.|++||...+. +..++.+|...|++++|+|+|++|++|+.||+|+||+...
T Consensus 153 v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~ 232 (345)
T 3fm0_A 153 VKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGV 232 (345)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCC
T ss_pred eEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccc
Confidence 9999998764 58999999999999998875 4578899999999999999999999999999999999632
Q ss_pred --------CeeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 430 --------DKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 430 --------~~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.+++..+.+ |...|++++|+|++. .+++++.|+.+++|...
T Consensus 233 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-------~l~s~~~d~~i~vw~~~ 282 (345)
T 3fm0_A 233 ACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-------ALATACGDDAIRVFQED 282 (345)
T ss_dssp CCC---CEEEEEEEECSSCSSCEEEEEECTTTC-------CEEEEETTSCEEEEEEC
T ss_pred eeeccCCccceeEEecCCCCCcEEEEEEecCCC-------EEEEEeCCCeEEEEEeC
Confidence 234555654 888999999999998 78899999999999753
No 12
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.8e-37 Score=291.88 Aligned_cols=267 Identities=21% Similarity=0.251 Sum_probs=225.3
Q ss_pred CCCCcccccCCCCceeeeCC----CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeE
Q 010754 186 GPEPMDIATTSASESFEIPN----SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVL 261 (502)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~----~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~ 261 (502)
.|....+++.+.+..+.++. ..+..+.+|..+|.+++|+|++++|++|+.|++|++||+.+++..
T Consensus 22 sp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~----------- 90 (304)
T 2ynn_A 22 HPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV----------- 90 (304)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-----------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEE-----------
Confidence 34444555665566555542 346788999999999999999999999999999999999887532
Q ss_pred EEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEec-CCCEEEEEecCCe
Q 010754 262 VLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKT 338 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~ 338 (502)
....+|...|++++|+|++++|++|+.||.|++||++. .....+.+|...|.+++|+| ++..|++|+.|++
T Consensus 91 ------~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~ 164 (304)
T 2ynn_A 91 ------VDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRT 164 (304)
T ss_dssp ------EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSE
T ss_pred ------EEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCe
Confidence 12235678899999999999999999999999999864 45567889999999999999 6789999999999
Q ss_pred EEEEEcCCCceEEEEe-eccCCeEEEEecC---CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE
Q 010754 339 AIVWDVKTEEWKQQFE-FHSGPTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 339 i~~wd~~~~~~~~~~~-~~~~~v~~v~~~~---~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la 414 (502)
|++||++++.....+. .+...+..+.|.+ +..+++++.|+.|++||+++++++.++.+|...|++++|+|++.+|+
T Consensus 165 v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~ 244 (304)
T 2ynn_A 165 VKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIII 244 (304)
T ss_dssp EEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEE
T ss_pred EEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEE
Confidence 9999998887666554 4557788888864 35799999999999999999999999999999999999999999999
Q ss_pred EEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 415 SCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+|+.||+|+|||+.+++++..+..|...+++++|+|+|. ..++.++.+....+|.
T Consensus 245 s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~asg~~~g~~~~~ 299 (304)
T 2ynn_A 245 SGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR------KNYIASGFDNGFTVLS 299 (304)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCG------GGCEEEEETTEEEEEE
T ss_pred EEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCC------ceEEEEecCCceEEEE
Confidence 999999999999999999999999999999999999986 1234455555566664
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-36 Score=289.60 Aligned_cols=261 Identities=20% Similarity=0.339 Sum_probs=226.3
Q ss_pred ccccCCCCceeeeCC---------CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeE
Q 010754 191 DIATTSASESFEIPN---------SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVL 261 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~---------~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~ 261 (502)
.+++.+.+..+.++. ..+..+.+|...|.+++|+|++++|++|+.|++|++||+.+++..
T Consensus 32 ~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~----------- 100 (319)
T 3frx_A 32 LLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETY----------- 100 (319)
T ss_dssp EEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----------
T ss_pred EEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCee-----------
Confidence 345555555555432 246788999999999999999999999999999999999886521
Q ss_pred EEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecC------CCEEEEEec
Q 010754 262 VLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKK------GDYLLTGSC 335 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~s~~~ 335 (502)
....+|...|.+++|+|++.+|++|+.||.|++||+++.....+.+|...|.+++|+|. +..|++++.
T Consensus 101 ------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~ 174 (319)
T 3frx_A 101 ------QRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGN 174 (319)
T ss_dssp ------EEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEET
T ss_pred ------EEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeC
Confidence 12245678899999999999999999999999999999999999999999999999985 448999999
Q ss_pred CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE
Q 010754 336 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la 414 (502)
|+.|++||+++++....+.+|...|.+++|+|++ .|++++.|+.|++||+.+++.+..+..+ ..|.+++|+|++.+|+
T Consensus 175 d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la 253 (319)
T 3frx_A 175 DKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLA 253 (319)
T ss_dssp TSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEE
T ss_pred CCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEE
Confidence 9999999999999999999999999999998865 5889999999999999999999988854 6899999999999999
Q ss_pred EEeCCCcEEEEECCCCeeEEEec--------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 415 SCSDDVTAKIWNMKQDKYVHDLR--------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~~~~~~~~--------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++.++ +++|++..+..+..+. .|...+.+++|+|+|. .|++++.|+.+++|...
T Consensus 254 ~~~~~~-i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-------~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 254 AATATG-IKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQ-------TLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp EEETTE-EEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSS-------EEEEEETTSCEEEEEEE
T ss_pred EEcCCC-cEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCCC-------EEEEeecCceEEEEEEe
Confidence 988665 9999999888777664 3456799999999998 88888899999999864
No 14
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-36 Score=290.77 Aligned_cols=248 Identities=23% Similarity=0.410 Sum_probs=206.7
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.+..|.+|.+.|++++|+|+ +||+|+.|++|++|++..+... ....+ ....|...|++++|+|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~-----------~~~~~--~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT-----------LIDVL--DETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCE-----------EEEEE--CTTCCCSCEEEEEECTTS
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE-----------EEEEE--ecCCccCCEEEEEECCCC
Confidence 46789999999999999987 9999999999999999764210 11111 112377889999999999
Q ss_pred CEEEEEECCCeEEEEECC--------CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC----CceEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN--------GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT----EEWKQQFE 354 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~--------~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~----~~~~~~~~ 354 (502)
++|++|+.|+.|+||+.. ......+.+|...|.+++|+|++++|++|+.|++|++||++. .+++..+.
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~ 150 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ 150 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC
T ss_pred CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec
Confidence 999999999999999974 235667889999999999999999999999999999999943 24677788
Q ss_pred eccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCC--cceEEEecCCCcEEEEEEcCC--CCEEEEEeCCCcEEEEECCC
Q 010754 355 FHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGEN--RPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 355 ~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~~i~~l~~sp~--g~~las~s~dg~i~iwd~~~ 429 (502)
.|...|.++.|+|+ ..|++++.|+.|++||...+ .++..+.+|.+.|.+++|+|+ +.+|++|+.|++|+|||+.+
T Consensus 151 ~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 151 EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 89999999999875 46899999999999999876 678899999999999999998 77999999999999999876
Q ss_pred C--------eeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 430 D--------KYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 430 ~--------~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+ .+...+.. |..+|++++|+|++ .+++++.|+.+++|...
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--------~l~s~~~dg~v~iw~~~ 279 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--------LIASVGADGVLAVYEEV 279 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--------CEEEEETTSCEEEEEEE
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCC--------EEEEEeCCCEEEEEEcC
Confidence 4 45556654 89999999999765 47888999999999853
No 15
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.1e-37 Score=299.06 Aligned_cols=247 Identities=19% Similarity=0.257 Sum_probs=206.6
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
....+|...|++++|+|++. +++++.||+|+|||+.+++.... ......+|...|++++|+|+|++
T Consensus 88 ~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~~~~~-------------~~~~~~~h~~~V~~v~~spdg~~ 153 (357)
T 4g56_B 88 TAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKESLLV-------------NKFAKYEHDDIVKTLSVFSDGTQ 153 (357)
T ss_dssp SEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC--------CC-------------CCEEECCCSSCEEEEEECSSSSE
T ss_pred cccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccceeEE-------------EeeccCCCCCCEEEEEECCCCCE
Confidence 34567999999999999986 55678899999999987653211 11122356788999999999999
Q ss_pred EEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCceEEEEe--eccCCeEEEE
Q 010754 289 LATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFE--FHSGPTLDVD 364 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~v~~v~ 364 (502)
|++|+.||.|++||++ +.....+..|...|.+++|+|++. ++++++.|++|++||+++++....+. .+...+.+++
T Consensus 154 l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~ 233 (357)
T 4g56_B 154 AVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVT 233 (357)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchh
Confidence 9999999999999987 566778899999999999999874 78999999999999999988766554 3566799999
Q ss_pred ecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 365 WRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 365 ~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
|+|+ ..|++++.|+.|++||+++++++.++.+|...|++++|+|++ ++||+|+.||+|+|||+++++++..+ +|..
T Consensus 234 ~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~ 312 (357)
T 4g56_B 234 WHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRD 312 (357)
T ss_dssp ECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSS
T ss_pred hhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCC
Confidence 9874 468899999999999999999999999999999999999987 68999999999999999999988665 7999
Q ss_pred cEEEEEEcc-CCCCCCCCCccEEEEeecCceEEEEee
Q 010754 442 EIYTIRWSP-TGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 442 ~i~~v~~sp-~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.|++|+|+| ++. .|++++.|+.+++|...
T Consensus 313 ~V~~vafsP~d~~-------~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 313 FVTGVAWSPLDHS-------KFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp CEEEEEECSSSTT-------EEEEEETTSCEEEEECC
T ss_pred CEEEEEEeCCCCC-------EEEEEcCCCeEEEEECC
Confidence 999999999 666 67788889999999864
No 16
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-36 Score=291.41 Aligned_cols=250 Identities=20% Similarity=0.291 Sum_probs=208.1
Q ss_pred CceEEeccCCCceEEEEE-----cC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEE
Q 010754 206 SDVTILEGHTSEVCACAW-----SP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 279 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~-----~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 279 (502)
.....|+||.+.|++++| ++ ++++|++|+.|++|++|++.+...... . ........+|...|++
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~------~----~~~~~~l~~h~~~V~~ 81 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY------F----GIPHKALTGHNHFVSD 81 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB------S----EEEEEEECCCSSCEEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc------c----ccccchhccCCCceEE
Confidence 456789999999999999 77 899999999999999999976532110 0 0111233467889999
Q ss_pred EEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe---e
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE---F 355 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~---~ 355 (502)
++|+|++.++++|+.|+.|++||+. +.....+.+|...|.+++|+|++++|++++.|++|++||+... ...... .
T Consensus 82 ~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~ 160 (343)
T 2xzm_R 82 LALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKEN 160 (343)
T ss_dssp EEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTS
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccC
Confidence 9999999999999999999999986 5667788899999999999999999999999999999999743 333333 5
Q ss_pred ccCCeEEEEecCC-----------CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q 010754 356 HSGPTLDVDWRNN-----------VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 424 (502)
Q Consensus 356 ~~~~v~~v~~~~~-----------~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~i 424 (502)
|...+.++.|++. ..|++++.|+.|++|| ........+.+|...|++++|+|+|++|++|+.||.|+|
T Consensus 161 ~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 161 HSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLI 239 (343)
T ss_dssp CSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEE
T ss_pred CCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEE
Confidence 7788999999876 4699999999999999 456677889999999999999999999999999999999
Q ss_pred EECCC-CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 425 WNMKQ-DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 425 wd~~~-~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
||+.+ ......+ .+...|.+++|+|++. +++++.++.+++|..
T Consensus 240 wd~~~~~~~~~~~-~~~~~v~~v~~sp~~~--------~la~~~d~~v~iw~~ 283 (343)
T 2xzm_R 240 WDILNLTYPQREF-DAGSTINQIAFNPKLQ--------WVAVGTDQGVKIFNL 283 (343)
T ss_dssp EESSCCSSCSEEE-ECSSCEEEEEECSSSC--------EEEEEESSCEEEEES
T ss_pred EECCCCcccceee-cCCCcEEEEEECCCCC--------EEEEECCCCEEEEEe
Confidence 99954 4344444 3556799999999986 566777889999975
No 17
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1.9e-37 Score=304.20 Aligned_cols=264 Identities=21% Similarity=0.356 Sum_probs=219.0
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCC-----------------------ceeEEE
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP-----------------------LNVLVL 263 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~-----------------------~~~~~~ 263 (502)
..++|.||.+.|++++|+|++++|++|+.|++|+|||+.++.....+..+. +.+..+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~ 137 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNL 137 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEEC
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEEC
Confidence 467899999999999999999999999999999999998765432211110 000000
Q ss_pred ee---------ecCccccCCCCeEEEEECCC-CCEEEEEECCCeEEEEECCC-ceEEEe-----cCccCCeEEEEEec-C
Q 010754 264 KH---------VKGRTNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNG-DLKCTL-----SKHKGPIFSLKWNK-K 326 (502)
Q Consensus 264 ~~---------~~~~~~~~~~~v~~l~~s~~-g~~l~s~~~dg~i~iwd~~~-~~~~~~-----~~~~~~v~~l~~~~-~ 326 (502)
.. ......+|...|.++.|+|+ +..|++|+.|+.|++||+.. .....+ .+|...|.+++|++ +
T Consensus 138 ~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 138 SSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS
T ss_pred CCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC
Confidence 00 11234567888999999996 45799999999999999874 444444 57899999999987 7
Q ss_pred CCEEEEEecCCeEEEEEcC-CCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCC-----
Q 010754 327 GDYLLTGSCDKTAIVWDVK-TEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQG----- 399 (502)
Q Consensus 327 ~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~----- 399 (502)
+++|++|+.|++|++||++ .+..+..+.+|...|.+++|+|+ ..|++++.|++|++||++++..+..+..+..
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 8999999999999999998 55788889999999999999876 4689999999999999999999888865532
Q ss_pred --cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe----ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 400 --EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 400 --~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~----~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
.|++++|+|+|++|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|+|. .|++++.|+.+++
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-------~l~sgs~D~~i~i 370 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGS-------ALCTGSWDKNLKI 370 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSS-------EEEEECTTSCEEE
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCC-------EEEEeeCCCCEEE
Confidence 4899999999999999999999999999999988777 58999999999999998 7888888999999
Q ss_pred EEee
Q 010754 474 WICS 477 (502)
Q Consensus 474 w~~~ 477 (502)
|...
T Consensus 371 W~~~ 374 (380)
T 3iz6_a 371 WAFS 374 (380)
T ss_dssp EECC
T ss_pred EecC
Confidence 9753
No 18
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=8.8e-38 Score=298.61 Aligned_cols=247 Identities=24% Similarity=0.365 Sum_probs=202.9
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 286 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g 286 (502)
.++.+|.+.|++++|+|+|++||+|+.|++|+|||+.++.. . ......+|...|++++|++ ++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----------~----~~~~l~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----------I----LIADLRGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----------E----EEEEEECCSSCEEEEEECCGGGS
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----------E----EEEEEcCCCccEEEEEeCCCCCC
Confidence 35679999999999999999999999999999999876531 0 1122346788999999986 48
Q ss_pred CEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCCce---EEEEeeccC
Q 010754 287 TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEW---KQQFEFHSG 358 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~~~---~~~~~~~~~ 358 (502)
++|++|+.|+.|++||++.. ....+.+|...|.+++|+|+ +.+|++|+.|++|++||++.+.. ...+..|..
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~ 151 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTI 151 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSS
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccC
Confidence 99999999999999998753 45677889999999999997 78999999999999999987632 234456888
Q ss_pred CeEEEEecCC------------------CEEEEEeCCCeEEEEEcCCC---cceEEEecCCCcEEEEEEcCCC----CEE
Q 010754 359 PTLDVDWRNN------------------VSFATSSTDNMIYVCKIGEN---RPIKTFAGHQGEVNCVKWDPTG----SLL 413 (502)
Q Consensus 359 ~v~~v~~~~~------------------~~~~~~~~d~~i~i~d~~~~---~~~~~~~~h~~~i~~l~~sp~g----~~l 413 (502)
.+.++.|+++ ..|++++.|+.|++||+... .++..+.+|...|.+++|+|++ .+|
T Consensus 152 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~l 231 (316)
T 3bg1_A 152 GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTI 231 (316)
T ss_dssp CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEE
T ss_pred CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceE
Confidence 8999999875 47999999999999999765 4677788999999999999987 899
Q ss_pred EEEeCCCcEEEEECCCC---e-eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 414 ASCSDDVTAKIWNMKQD---K-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 414 as~s~dg~i~iwd~~~~---~-~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|+|+.||+|+||++.+. . ....+..|...|++++|+|+|. .|++++.|+.+++|...
T Consensus 232 as~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-------~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 232 ASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-------ILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-------CEEEEESSSCEEEEEEC
T ss_pred EEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-------EEEEEcCCCeEEEEEEC
Confidence 99999999999998762 1 2234557889999999999998 78888999999999864
No 19
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.3e-36 Score=288.56 Aligned_cols=272 Identities=21% Similarity=0.359 Sum_probs=218.1
Q ss_pred CCCCcccccCCCCceeeeC---CCc----eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCc
Q 010754 186 GPEPMDIATTSASESFEIP---NSD----VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPL 258 (502)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~---~~~----~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~ 258 (502)
.|....+++.+.+..+.++ ... .....+|.+.|.+++|+|++++|++|+.|++++||++..+..
T Consensus 25 sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~--------- 95 (345)
T 3fm0_A 25 NPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDF--------- 95 (345)
T ss_dssp CTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-E---------
T ss_pred CCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCe---------
Confidence 3444455565555555543 221 223478999999999999999999999999999999876531
Q ss_pred eeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC----ceEEEecCccCCeEEEEEecCCCEEEEEe
Q 010754 259 NVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGS 334 (502)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~ 334 (502)
. ......+|...|++++|+|++++|++|+.|+.|++||+.. .....+..|...|.+++|+|++++|++++
T Consensus 96 --~----~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s 169 (345)
T 3fm0_A 96 --E----CVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASAS 169 (345)
T ss_dssp --E----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEE
T ss_pred --E----EEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEe
Confidence 0 1122345778999999999999999999999999999864 23567789999999999999999999999
Q ss_pred cCCeEEEEEcCCCc--eEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCC---------------cceEEEec
Q 010754 335 CDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGEN---------------RPIKTFAG 396 (502)
Q Consensus 335 ~d~~i~~wd~~~~~--~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~---------------~~~~~~~~ 396 (502)
.|++|++||++++. +...+.+|...|.+++|+|++ .|++++.|++|++|+.... .++.++.+
T Consensus 170 ~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (345)
T 3fm0_A 170 YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSG 249 (345)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECS
T ss_pred CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecC
Confidence 99999999998875 446788899999999998764 6899999999999997432 22345555
Q ss_pred -CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---------eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 397 -HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK---------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 397 -h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~---------~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
|...|.+++|+|++.+|++++.|+.|++|+..... ..+...+|...|++|+|+|++. ..+++++
T Consensus 250 ~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~------~~laS~s 323 (345)
T 3fm0_A 250 FHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP------GLLASCS 323 (345)
T ss_dssp SCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSST------TEEEEEE
T ss_pred CCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCc------eEEEEcC
Confidence 88899999999999999999999999999986542 1233458999999999999974 2567788
Q ss_pred ecCceEEEEeee
Q 010754 467 LIPYFLYWICSI 478 (502)
Q Consensus 467 ~~~~~~iw~~~~ 478 (502)
.|+.+++|...-
T Consensus 324 ~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 324 DDGEVAFWKYQR 335 (345)
T ss_dssp TTSCEEEEEECC
T ss_pred CCCcEEEEEecC
Confidence 899999998643
No 20
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.3e-36 Score=313.89 Aligned_cols=249 Identities=24% Similarity=0.355 Sum_probs=217.6
Q ss_pred CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
......+.+|.+.|++++|+|+|++||+|+.|++|+|||+.++... .......|...|.+++|+|
T Consensus 49 ~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~---------------~~~~~~~~~~~v~~v~fs~ 113 (611)
T 1nr0_A 49 LTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI---------------LKTTIPVFSGPVKDISWDS 113 (611)
T ss_dssp SSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC---------------EEEEEECSSSCEEEEEECT
T ss_pred cccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce---------------eeEeecccCCceEEEEECC
Confidence 3457889999999999999999999999999999999998754321 0112234677899999999
Q ss_pred CCCEEEEEECC----CeEEEEECCCceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCceEEEEeeccCC
Q 010754 285 EGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 359 (502)
Q Consensus 285 ~g~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 359 (502)
+|++|++++.+ +.|++||. +.....+.+|...|.+++|+|++. .|++|+.|++|++||..++++...+.+|...
T Consensus 114 dg~~l~~~~~~~~~~~~v~~wd~-~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~ 192 (611)
T 1nr0_A 114 ESKRIAAVGEGRERFGHVFLFDT-GTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKF 192 (611)
T ss_dssp TSCEEEEEECCSSCSEEEEETTT-CCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSC
T ss_pred CCCEEEEEECCCCceeEEEEeeC-CCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCc
Confidence 99999999875 47899984 445567889999999999999986 6999999999999999999999999999999
Q ss_pred eEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe-------cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 360 TLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 360 v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~-------~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
|.+++|+|++ .+++++.|+.|++||+.+++.+..+. +|.+.|.+++|+|+|++|++|+.|++|+|||+.+++
T Consensus 193 V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 193 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 9999998865 58899999999999999999888884 799999999999999999999999999999999877
Q ss_pred eEEE-------------------------------------------eccCCCcEEEEEEccCCCCCCCCCccEEEEeec
Q 010754 432 YVHD-------------------------------------------LREHSKEIYTIRWSPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 432 ~~~~-------------------------------------------~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~ 468 (502)
++.. +.+|...|++++|+|+|. .+++++.|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-------~l~s~s~D 345 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-------TLFSADAE 345 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEETT
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-------EEEEEeCC
Confidence 6543 347889999999999998 88889999
Q ss_pred CceEEEEe
Q 010754 469 PYFLYWIC 476 (502)
Q Consensus 469 ~~~~iw~~ 476 (502)
+.+++|+.
T Consensus 346 ~~v~~Wd~ 353 (611)
T 1nr0_A 346 GHINSWDI 353 (611)
T ss_dssp SCEEEEET
T ss_pred CcEEEEEC
Confidence 99999974
No 21
>2xtc_A F-box-like/WD repeat-containing protein TBL1X; transcription; 2.22A {Homo sapiens} PDB: 2xte_A 2xtd_A
Probab=100.00 E-value=8e-40 Score=233.88 Aligned_cols=84 Identities=51% Similarity=0.858 Sum_probs=70.5
Q ss_pred CCCcchhhHHHHHHHHhcCCcchhhcccccccCccCCCCCCCCCchhHHHHHHhhhhhhhhhhccCCCCcccCccccccc
Q 010754 3 SITSEELNYLVFRYLQESGLLHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQYLEMEANLSNSDVDMDEDFSFLQ 82 (502)
Q Consensus 3 ~lts~evn~li~rYlqE~g~~~sA~~~~~e~~~~~~~~~~~~ip~~aLv~l~qkgl~y~~~e~~~~~~~~~~~~~~~~~~ 82 (502)
|||||||||||||||||+||.||||+|++||+|.++++++.+|||||||+||||||||+++|.++++++..++.. ++.
T Consensus 2 sitsdevN~LI~RYLqEsGf~hsAf~f~~Es~i~~~~~~~~~VppgaLVsllQKGL~Y~~~E~~~~~~g~~~~~~--~~~ 79 (90)
T 2xtc_A 2 SITSDEVNFLVYRYLQESGFSHSAFTFGIESHISQSNINGTLVPPAALISILQKGLQYVEAEISINEDGTVFDGR--PIE 79 (90)
T ss_dssp CCCHHHHHHHHHHHHHHTTCHHHHHHHHHHTTGGGSCCCGGGSCTTHHHHHHHHHHHHHHHHHHTTSSCCTTCC------
T ss_pred CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhcCCccccccccCCcchHHHHHHHHHHHHHHHHHhcCCCCccCCC--CCC
Confidence 799999999999999999999999999999999999998899999999999999999999999999988765533 334
Q ss_pred cCcccc
Q 010754 83 PMDLIT 88 (502)
Q Consensus 83 ~~~~~~ 88 (502)
|+++..
T Consensus 80 ~~~ll~ 85 (90)
T 2xtc_A 80 SLSLID 85 (90)
T ss_dssp ------
T ss_pred chhhhh
Confidence 444443
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.7e-35 Score=291.76 Aligned_cols=244 Identities=20% Similarity=0.282 Sum_probs=208.0
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.+++|+|++++|++|+.|++|+|||+.+++.. ....+|...|++++|+|++++|++|+.|
T Consensus 124 ~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~-----------------~~~~~h~~~v~~~~~~p~~~~l~s~s~d 186 (393)
T 1erj_A 124 LYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIV-----------------MILQGHEQDIYSLDYFPSGDKLVSGSGD 186 (393)
T ss_dssp CBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred eeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE-----------------EEEccCCCCEEEEEEcCCCCEEEEecCC
Confidence 35999999999999999999999999999876421 1234567889999999999999999999
Q ss_pred CeEEEEECCCceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEE-------eeccCCeEEEEecC
Q 010754 296 GQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQF-------EFHSGPTLDVDWRN 367 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~-------~~~~~~v~~v~~~~ 367 (502)
+.|++||+..........+...+.+++|+| ++++|++|+.|+.|++||++++..+..+ .+|...|.+++|++
T Consensus 187 ~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~ 266 (393)
T 1erj_A 187 RTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTR 266 (393)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECT
T ss_pred CcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECC
Confidence 999999987655444445677899999999 8999999999999999999999888776 46888999999987
Q ss_pred CC-EEEEEeCCCeEEEEEcCCC------------cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 368 NV-SFATSSTDNMIYVCKIGEN------------RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 368 ~~-~~~~~~~d~~i~i~d~~~~------------~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
++ .+++++.|+.|++||+++. .+...+.+|...|.+++|+|++.+|++|+.||.|++||+.+++++.
T Consensus 267 ~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 346 (393)
T 1erj_A 267 DGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLL 346 (393)
T ss_dssp TSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEE
Confidence 65 6899999999999999753 3456788999999999999999999999999999999999999999
Q ss_pred EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 435 DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 435 ~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.+.+|...|.+++|+|.... ......+++++.|+.+++|...
T Consensus 347 ~l~~h~~~v~~v~~~~~~~~-~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 347 MLQGHRNSVISVAVANGSSL-GPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp EEECCSSCEEEEEECSSCTT-CTTCEEEEEEETTSEEEEEEEE
T ss_pred EECCCCCCEEEEEecCCcCc-CCCCCEEEEECCCCcEEECccc
Confidence 99999999999999985431 1122367888889999999864
No 23
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2e-35 Score=285.69 Aligned_cols=244 Identities=18% Similarity=0.296 Sum_probs=206.7
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.. ....+|...|++++|+|++
T Consensus 68 ~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~-----------------~~~~~h~~~v~~v~~sp~~ 130 (343)
T 2xzm_R 68 PHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTY-----------------KRFVGHQSEVYSVAFSPDN 130 (343)
T ss_dssp EEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEE-----------------EEEECCCSCEEEEEECSST
T ss_pred ccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEE-----------------EEEcCCCCcEEEEEECCCC
Confidence 35678999999999999999999999999999999999876521 1223567889999999999
Q ss_pred CEEEEEECCCeEEEEECCCceEEEec---CccCCeEEEEEecCC----------CEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLS---KHKGPIFSLKWNKKG----------DYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~---~~~~~v~~l~~~~~~----------~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
++|++|+.|+.|++||+.+....... .|...|.+++|+|++ .+|++++.|++|++|| ........+
T Consensus 131 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~ 209 (343)
T 2xzm_R 131 RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTF 209 (343)
T ss_dssp TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEE
T ss_pred CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEE
Confidence 99999999999999999876555544 788999999999987 7999999999999999 456777788
Q ss_pred eeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCC-CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 354 EFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 354 ~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
..|...|.+++|++++ .|++++.|+.|++||+.. ..+...+. +...|.+++|+|++.+|+++ .|+.|++||+.+++
T Consensus 210 ~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~~-~d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 210 KAHESNVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAVG-TDQGVKIFNLMTQS 287 (343)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEEE-ESSCEEEEESSSCC
T ss_pred cCccccceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEEE-CCCCEEEEEeCCCC
Confidence 8999999999998765 688999999999999954 44555553 56679999999999988765 47789999998776
Q ss_pred eEE--Eec-----------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 432 YVH--DLR-----------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 432 ~~~--~~~-----------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
... .+. +|...|++++|+|+|. .|++|+.|+.+++|...
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-------~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 288 KAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGK-------KLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp SCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSC-------CEEEEETTSEEEEEEEE
T ss_pred CCceEEeecCcchhhhhhcCCCCceEEEEECCCCC-------eEEEecCCceEEEEEEE
Confidence 543 443 6888899999999998 78889999999999864
No 24
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.4e-36 Score=291.54 Aligned_cols=251 Identities=17% Similarity=0.204 Sum_probs=201.1
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 291 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s 291 (502)
..|...|.+++|+|||++|++++ |+++++||.............. .........+...|++++|+|++ .|++
T Consensus 27 ~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~------~~~~~~~~~~~~~v~~~~~s~d~-~l~~ 98 (344)
T 4gqb_B 27 ACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPN------EGFCSAGVQTEAGVADLTWVGER-GILV 98 (344)
T ss_dssp SSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTC------GGGCSEEEEESSCEEEEEEETTT-EEEE
T ss_pred ccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCC------cceeeeeeccCCCEEEEEEeCCC-eEEE
Confidence 35677899999999999999888 7788998743210000000000 00001111234679999999985 6889
Q ss_pred EECCCeEEEEECCCc-e----EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 292 GSYDGQARIWSTNGD-L----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 292 ~~~dg~i~iwd~~~~-~----~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
|+.||.|+|||++.. . .....+|...|++++|+|++++|++|+.|++|++||+.+++++..+.+|...|.++.|+
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~ 178 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAAS 178 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEec
Confidence 999999999997642 2 23455899999999999999999999999999999999999999999999999999998
Q ss_pred CCC--EEEEEeCCCeEEEEEcCCCcceEEEe--cCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 367 NNV--SFATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 367 ~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~--~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
+++ .|++++.|+.|++||+++++++..+. .|...+++++|+|+ +++|++|+.||+|+|||+++++++..+.+|..
T Consensus 179 ~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~ 258 (344)
T 4gqb_B 179 PHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQ 258 (344)
T ss_dssp SSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSS
T ss_pred CCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCC
Confidence 754 68999999999999999999888774 45567999999995 67899999999999999999999999999999
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.|++++|+|+|. ..|++++.|+.+++|+.
T Consensus 259 ~v~~v~fsp~g~------~~lasgs~D~~i~vwd~ 287 (344)
T 4gqb_B 259 CVTGLVFSPHSV------PFLASLSEDCSLAVLDS 287 (344)
T ss_dssp CEEEEEECSSSS------CCEEEEETTSCEEEECT
T ss_pred CEEEEEEccCCC------eEEEEEeCCCeEEEEEC
Confidence 999999999985 24677888999999963
No 25
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9e-36 Score=286.46 Aligned_cols=252 Identities=23% Similarity=0.395 Sum_probs=200.1
Q ss_pred eEEe-cc-CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 208 VTIL-EG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 208 ~~~l-~~-H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
+..+ .+ |.+.|.+++|+|++++|++|+.|++|+||++....... .... ......+|...|++++|+|+
T Consensus 49 ~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~------~~~~----~~~~~~~h~~~V~~v~~sp~ 118 (330)
T 2hes_X 49 IDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT------FEMD----LLAIIEGHENEVKGVAWSND 118 (330)
T ss_dssp EEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------------CCCE----EEEEEC----CEEEEEECTT
T ss_pred EEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc------ccce----eEEEEcCCCCcEEEEEECCC
Confidence 3445 44 99999999999999999999999999999986432100 0000 11223457789999999999
Q ss_pred CCEEEEEECCCeEEEEECC-C----ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--ceEEEEeeccC
Q 010754 286 GTLLATGSYDGQARIWSTN-G----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--EWKQQFEFHSG 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~ 358 (502)
|++|++|+.|+.|++||+. . .....+.+|...|.+++|+|++.+|++++.|++|++||+.++ +++..+.+|..
T Consensus 119 g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~ 198 (330)
T 2hes_X 119 GYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG 198 (330)
T ss_dssp SCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS
T ss_pred CCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC
Confidence 9999999999999999984 2 345678899999999999999999999999999999999876 57788899999
Q ss_pred CeEEEEecCC---CEEEEEeCCCeEEEEEcCCC--------cceEEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 359 PTLDVDWRNN---VSFATSSTDNMIYVCKIGEN--------RPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 359 ~v~~v~~~~~---~~~~~~~~d~~i~i~d~~~~--------~~~~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.|.++.|+++ ..+++++.|++|++||+..+ .....+.+ |...|.+++|++++ +|++++.||.|+|||
T Consensus 199 ~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~ 277 (330)
T 2hes_X 199 TVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYE 277 (330)
T ss_dssp CEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEE
T ss_pred cEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEE
Confidence 9999999886 36899999999999999764 33445555 89999999999765 899999999999999
Q ss_pred CCCCe--eEEE-eccCCC-cEEEEEEcc--CCCCCCCCCccEEEEeecCceEEEEee
Q 010754 427 MKQDK--YVHD-LREHSK-EIYTIRWSP--TGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 427 ~~~~~--~~~~-~~~h~~-~i~~v~~sp--~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
..+++ .+.. +.+|.. .|.+++|+| ++. .|++++.|+.+++|...
T Consensus 278 ~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~-------~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 278 EVDGEWKVFAKRALCHGVYEINVVKWLELNGKT-------ILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EETTEEEEEEEESCTTTTSCEEEEEEC-----C-------CEEEEETTSEEEEEEC-
T ss_pred cCCCceEEEeccccccccceEEEEEEecCCCce-------EEEEecCCCcEEEEEec
Confidence 98874 3333 357887 899999999 565 67888899999999753
No 26
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.7e-35 Score=279.87 Aligned_cols=246 Identities=26% Similarity=0.462 Sum_probs=215.3
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|.+.|++++|+|++++|++|+.||.|++|++.+++.. .....|...|.+++|+|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~-----------------~~~~~h~~~v~~~~~~~~~ 77 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFE-----------------KTISGHKLGISDVAWSSDS 77 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECTTS
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccc-----------------hhhccCCCceEEEEEcCCC
Confidence 45678999999999999999999999999999999998876521 1223567789999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
++|++|+.||.|++||+. +.....+..|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|..++.++.|
T Consensus 78 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 999999999999999986 4667788899999999999999999999999999999999999999999999999999999
Q ss_pred cCC-CEEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcE
Q 010754 366 RNN-VSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 443 (502)
Q Consensus 366 ~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i 443 (502)
+++ ..+++++.|+.|++||+++++.+..+. .+...+..++|+|++++|++++.||.|++||+++++++..+.+|...+
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 237 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEK 237 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSS
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCce
Confidence 875 468899999999999999998887764 456789999999999999999999999999999999999998887653
Q ss_pred E--EEEEc-cCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 444 Y--TIRWS-PTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 444 ~--~v~~s-p~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
. ...|+ +++. .+++++.|+.+++|+.
T Consensus 238 ~~~~~~~~~~~~~-------~l~sg~~dg~i~vwd~ 266 (312)
T 4ery_A 238 YCIFANFSVTGGK-------WIVSGSEDNLVYIWNL 266 (312)
T ss_dssp SCCCEEEECSSSC-------EEEECCTTSCEEEEET
T ss_pred EEEEEEEEeCCCc-------EEEEECCCCEEEEEEC
Confidence 3 23444 4444 6778888899999974
No 27
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1e-35 Score=286.89 Aligned_cols=250 Identities=20% Similarity=0.394 Sum_probs=215.3
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--C
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--E 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~ 285 (502)
...+.+|.+.|++++|+|++++|++|+.||+|++|++.++... . ........|...|++++|+| +
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---------~----~~~~~~~~~~~~v~~~~~~~~~d 70 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---------W----ELSDSWRAHDSSIVAIDWASPEY 70 (351)
T ss_dssp CCEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---------E----EEEEEEECCSSCEEEEEECCGGG
T ss_pred cccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---------c----eecceeccCCCcEEEEEEcCCCC
Confidence 3567899999999999999999999999999999999865321 0 11122335678899999999 6
Q ss_pred CCEEEEEECCCeEEEEECCC----------ceEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 286 GTLLATGSYDGQARIWSTNG----------DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~----------~~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
+++|++|+.||.|++||++. .....+..|...|.+++|+|+ +++|++++.||.|++||+++++.+..+
T Consensus 71 ~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 71 GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred CCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 99999999999999999875 457788899999999999999 999999999999999999887754433
Q ss_pred e-------------eccCCeEEEEecC----CCEEEEEeCCCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCC----
Q 010754 354 E-------------FHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTG---- 410 (502)
Q Consensus 354 ~-------------~~~~~v~~v~~~~----~~~~~~~~~d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g---- 410 (502)
. .+...+.++.|++ ...+++++.++.+.+|+...+.. +..+.+|...|++++|+|++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~ 230 (351)
T 3f3f_A 151 TLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWY 230 (351)
T ss_dssp EEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSS
T ss_pred cccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcc
Confidence 2 4667899999987 56799999999998888877764 77788999999999999998
Q ss_pred CEEEEEeCCCcEEEEECCCC----------------------------------------------eeEEEeccCCCcEE
Q 010754 411 SLLASCSDDVTAKIWNMKQD----------------------------------------------KYVHDLREHSKEIY 444 (502)
Q Consensus 411 ~~las~s~dg~i~iwd~~~~----------------------------------------------~~~~~~~~h~~~i~ 444 (502)
++|++|+.||.|++||++++ +++..+.+|...|+
T Consensus 231 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 310 (351)
T 3f3f_A 231 QLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVW 310 (351)
T ss_dssp EEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEE
T ss_pred eEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEE
Confidence 89999999999999999865 67778889999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++|+|+|. .+++++.|+.+++|...
T Consensus 311 ~~~~s~~~~-------~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 311 SVSWNLTGT-------ILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp EEEECSSSC-------CEEEEETTSCEEEEEEC
T ss_pred EEEEcCCCC-------EEEEecCCCcEEEEecC
Confidence 999999998 78889999999999865
No 28
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2.4e-35 Score=305.44 Aligned_cols=246 Identities=26% Similarity=0.481 Sum_probs=221.9
Q ss_pred eeCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 202 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 202 ~~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
.+....+..+.+|...|.+++|+|++++|++|+.|+.|++|+... +. +. ....|...|++++
T Consensus 331 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~-~~-------------~~----~~~~~~~~v~~~~ 392 (577)
T 2ymu_A 331 NRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNG-QL-------------LQ----TLTGHSSSVRGVA 392 (577)
T ss_dssp ETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTC-CE-------------EE----EEECCSSCEEEEE
T ss_pred eCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCC-CE-------------EE----EecCCCCCeEEEE
Confidence 344566788899999999999999999999999999999999543 21 11 1234677899999
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 282 WNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
|+|+|++|++++.|+.|++||..+.....+..|...|++++|+|++++|++++.|++|++||. +++.+..+..|...+.
T Consensus 393 ~s~dg~~l~~~~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~ 471 (577)
T 2ymu_A 393 FSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVR 471 (577)
T ss_dssp ECTTSSCEEEEETTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEE
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEE
Confidence 999999999999999999999999999999999999999999999999999999999999996 5778888999999999
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 362 DVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 362 ~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
+++|+|++ .+++++.|+.|++||. +++.+..+.+|...|++++|+|+|++||+++.||.|+|||. +++++..+.+|.
T Consensus 472 ~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 472 GVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 99998765 5888999999999995 67888999999999999999999999999999999999995 688999999999
Q ss_pred CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 441 KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 441 ~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+|++++|+|||. .|++++.|+.+++|+
T Consensus 550 ~~v~~~~fs~dg~-------~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 550 SSVWGVAFSPDGQ-------TIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECTTSS-------CEEEEETTSCEEEEC
T ss_pred CCEEEEEEcCCCC-------EEEEEeCCCEEEEeC
Confidence 9999999999998 888999999999995
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=7.8e-36 Score=290.00 Aligned_cols=247 Identities=17% Similarity=0.223 Sum_probs=203.4
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeC------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSG------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
...+|...|.+++|+|||++||+|+. |++|++|+..++..... .......|...|++++|+
T Consensus 37 ~p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~-------------~~~~~~~~~~~V~~~~~s 103 (357)
T 4g56_B 37 APACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNES-------------LCTAGVQTEAGVTDVAWV 103 (357)
T ss_dssp ---CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGG-------------GCSEEEECSSCEEEEEEE
T ss_pred CcccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCccee-------------EecccCCCCCCEEEEEEc
Confidence 34579999999999999999999997 67899999877643211 112223456789999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCce-----EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC
Q 010754 284 GEGTLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
|++. +++++.||.|+|||+.... .....+|...|.+++|+|++++|++|+.|++|++||+++++.+..+..|..
T Consensus 104 ~d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~ 182 (357)
T 4g56_B 104 SEKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS 182 (357)
T ss_dssp TTTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS
T ss_pred CCCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC
Confidence 9986 5567889999999976432 234557999999999999999999999999999999999999999999999
Q ss_pred CeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEe--cCCCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeE
Q 010754 359 PTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 359 ~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~--~h~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
.|.+++|+++ ..+++++.|+.|++||+++++++..+. .|...+++++|+|+ +.+|++|+.|+.|++||+++++++
T Consensus 183 ~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~ 262 (357)
T 4g56_B 183 EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA 262 (357)
T ss_dssp CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC
T ss_pred CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe
Confidence 9999999765 368999999999999999988766554 46678999999997 568999999999999999999999
Q ss_pred EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 434 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..+.+|..+|++++|+|+|. ..|++++.|+.+++|+.
T Consensus 263 ~~~~~~~~~v~~l~~sp~~~------~~lasgs~D~~i~iwd~ 299 (357)
T 4g56_B 263 QTSAVHSQNITGLAYSYHSS------PFLASISEDCTVAVLDA 299 (357)
T ss_dssp EEECCCSSCEEEEEECSSSS------CCEEEEETTSCEEEECT
T ss_pred EEEeccceeEEEEEEcCCCC------CEEEEEeCCCEEEEEEC
Confidence 99999999999999999985 24667888899999964
No 30
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.4e-34 Score=275.73 Aligned_cols=266 Identities=24% Similarity=0.412 Sum_probs=222.3
Q ss_pred CCCcccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 187 PEPMDIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
|....+++.+.+..+.+. ......+.+|...|.+++|+|++++|++|+.|+.|++||+.+++..
T Consensus 33 ~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~------------ 100 (312)
T 4ery_A 33 PNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCL------------ 100 (312)
T ss_dssp TTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE------------
T ss_pred CCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEE------------
Confidence 333344555555444442 3456788999999999999999999999999999999999876531
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
. ....|...|.+++|+|++++|++|+.||.|++||+. +.....+..|..+|.+++|+|++++|++++.||.|++
T Consensus 101 -~----~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 175 (312)
T 4ery_A 101 -K----TLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRI 175 (312)
T ss_dssp -E----EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred -E----EEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Confidence 1 123467789999999999999999999999999987 4667788899999999999999999999999999999
Q ss_pred EEcCCCceEEEEee-ccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEE---EEEEcCCCCEEEEE
Q 010754 342 WDVKTEEWKQQFEF-HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVN---CVKWDPTGSLLASC 416 (502)
Q Consensus 342 wd~~~~~~~~~~~~-~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~---~l~~sp~g~~las~ 416 (502)
||+++++.+..+.. +..++..++|++++ .+++++.|+.|++||+.+++.+..+.+|...+. .....+++.+|++|
T Consensus 176 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 255 (312)
T 4ery_A 176 WDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSG 255 (312)
T ss_dssp EETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEEC
T ss_pred EECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEE
Confidence 99999988877643 55678999998764 588999999999999999999999998876533 23334678999999
Q ss_pred eCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe--ecCceEEEEe
Q 010754 417 SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR--LIPYFLYWIC 476 (502)
Q Consensus 417 s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las--~~~~~~iw~~ 476 (502)
+.||.|++||+.+++++..+.+|...|.+++|+|++. .+++++ .|+.+++|..
T Consensus 256 ~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~-------~l~s~~~~~d~~i~~W~~ 310 (312)
T 4ery_A 256 SEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN-------IIASAALENDKTIKLWKS 310 (312)
T ss_dssp CTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS-------EEEEEECTTTCCEEEEEC
T ss_pred CCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC-------ceEEEEccCCccEEEecC
Confidence 9999999999999999999999999999999999998 555555 3788999964
No 31
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=287.62 Aligned_cols=249 Identities=26% Similarity=0.401 Sum_probs=213.3
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE- 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~- 285 (502)
.+.++.+|.+.|++++|+|++++||+|+.||.|+||++..... ........|...|++++|+++
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~~~~~ 67 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---------------KLIDTLTGHEGPVWRVDWAHPK 67 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE---------------EEEEEECCCSSCEEEEEECCGG
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcc---------------eeeeEecCCCCcEEEEEeCCCC
Confidence 3567899999999999999999999999999999999874321 111223456789999999987
Q ss_pred -CCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCCc--eEEEEeecc
Q 010754 286 -GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHS 357 (502)
Q Consensus 286 -g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~ 357 (502)
+++|++|+.||.|++||+... ....+..|...|.+++|+|+ +.+|++++.|+.|++||++++. ....+..|.
T Consensus 68 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~ 147 (379)
T 3jrp_A 68 FGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA 147 (379)
T ss_dssp GCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT
T ss_pred CCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC
Confidence 999999999999999998754 66777889999999999999 9999999999999999998873 445667789
Q ss_pred CCeEEEEecC--------------CCEEEEEeCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCC---CCEEEEE
Q 010754 358 GPTLDVDWRN--------------NVSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPT---GSLLASC 416 (502)
Q Consensus 358 ~~v~~v~~~~--------------~~~~~~~~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~---g~~las~ 416 (502)
..+.++.|++ +..+++++.|+.|++||++.+. .+..+.+|...|++++|+|+ +.+|+++
T Consensus 148 ~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~ 227 (379)
T 3jrp_A 148 IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASV 227 (379)
T ss_dssp TCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEE
T ss_pred CceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEE
Confidence 9999999987 5779999999999999998765 45677889999999999999 8999999
Q ss_pred eCCCcEEEEECCCCe-----eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 417 SDDVTAKIWNMKQDK-----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 417 s~dg~i~iwd~~~~~-----~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.||.|+|||++++. .+.....|...|++++|+|+|. .+++++.++.+++|...
T Consensus 228 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-------~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 228 SQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALSGGDNKVTLWKEN 286 (379)
T ss_dssp ETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC-------CEEEEESSSSEEEEEEE
T ss_pred eCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCC-------EEEEecCCCcEEEEeCC
Confidence 999999999998863 2223335888999999999998 78888999999999876
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.4e-35 Score=286.73 Aligned_cols=256 Identities=22% Similarity=0.365 Sum_probs=208.5
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeee-cCccccCCCCeEEEEECCCCCEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-KGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
.+|.+.|.|++|+|+|++||+|+ |+++++|++.++.....+............. ......+...|++++|+|+|++|+
T Consensus 61 ~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp EECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred cCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 37999999999999999999986 6899999998876533222111000000000 000112233599999999999999
Q ss_pred EEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC--
Q 010754 291 TGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-- 367 (502)
Q Consensus 291 s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-- 367 (502)
+|+.||.|+|||+.. .....+.+|...|.+++|+|++++|++++.|++|++||++++++...+. +...+..++|++
T Consensus 140 s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~ 218 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGD 218 (393)
T ss_dssp EEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTT
T ss_pred EEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCC
Confidence 999999999999874 5667888999999999999999999999999999999999998887775 556789999976
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcceEEE-------ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----------
Q 010754 368 NVSFATSSTDNMIYVCKIGENRPIKTF-------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ----------- 429 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~~~~~~~-------~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~----------- 429 (502)
+..+++++.|+.|++||+.++..+..+ .+|...|++++|+|+|++|++|+.||.|++||+++
T Consensus 219 ~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~ 298 (393)
T 1erj_A 219 GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPN 298 (393)
T ss_dssp CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC-------------
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCC
Confidence 457899999999999999999887776 57999999999999999999999999999999975
Q ss_pred -CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 430 -DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 430 -~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.+...+.+|...|.+++|+|++. .+++++.|+.+++|+.
T Consensus 299 ~~~~~~~~~~h~~~v~~~~~~~~~~-------~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 299 SGTCEVTYIGHKDFVLSVATTQNDE-------YILSGSKDRGVLFWDK 339 (393)
T ss_dssp --CEEEEEECCSSCEEEEEECGGGC-------EEEEEETTSEEEEEET
T ss_pred CCcceEEEecccCcEEEEEECCCCC-------EEEEEeCCCeEEEEEC
Confidence 345667789999999999999998 7888889999999974
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.1e-34 Score=295.52 Aligned_cols=245 Identities=27% Similarity=0.455 Sum_probs=221.3
Q ss_pred eCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 203 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 203 ~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
.....+..+.+|...|.+++|+|++++|++++.|++|++|++..... . ....|...|.+++|
T Consensus 291 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~--------------~----~~~~~~~~v~~~~~ 352 (577)
T 2ymu_A 291 RNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHL--------------Q----TLTGHSSSVWGVAF 352 (577)
T ss_dssp TTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEE--------------E----EECCCSSCEEEEEE
T ss_pred CCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCee--------------E----EEeCCCCCEEEEEE
Confidence 34556788899999999999999999999999999999999765321 1 12345678999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 283 NGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
+|+|++|++|+.||.|++|+..+.....+..|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...|.+
T Consensus 353 s~~g~~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~ 431 (577)
T 2ymu_A 353 SPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWG 431 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEE
T ss_pred CCCCCEEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999995 67788889999999999
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 363 VDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 363 v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
++|+|++ .+++++.|+.|++||. +++.+..+.+|...|++++|+|++++|++++.|+.|+|||. +++++..+.+|..
T Consensus 432 ~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~~~~~~~~h~~ 509 (577)
T 2ymu_A 432 VAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS 509 (577)
T ss_dssp EEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSCEEEEEECCSS
T ss_pred EEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCCEEEEEeCCCC
Confidence 9998754 6889999999999996 56778899999999999999999999999999999999994 6889999999999
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+|++++|+|+|. .|++++.|+.+++|+
T Consensus 510 ~v~~l~~s~dg~-------~l~s~~~dg~v~lwd 536 (577)
T 2ymu_A 510 SVRGVAFSPDGQ-------TIASASDDKTVKLWN 536 (577)
T ss_dssp CEEEEEECTTSS-------CEEEEETTSEEEEEC
T ss_pred CEEEEEEcCCCC-------EEEEEECcCEEEEEe
Confidence 999999999998 788888899999996
No 34
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-34 Score=304.33 Aligned_cols=248 Identities=23% Similarity=0.324 Sum_probs=213.3
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+++|++.|++++|+|+ +++|+||+.|++|++|++.+..... .. ......+|...|++++|+|++
T Consensus 375 ~~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~--------~~----~~~~~~~h~~~v~~v~~s~~g 442 (694)
T 3dm0_A 375 KGTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY--------GV----AQRRLTGHSHFVEDVVLSSDG 442 (694)
T ss_dssp EEEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS--------CE----EEEEEECCSSCEEEEEECTTS
T ss_pred hhhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc--------cc----ccceecCCCCcEEEEEECCCC
Confidence 3578999999999999996 5799999999999999997653211 00 112234678899999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE---eeccCCeEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF---EFHSGPTLD 362 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~~~~~v~~ 362 (502)
++|++|+.||.|+|||+. +.....+.+|...|.+++|+|++++|++|+.|++|++||+......... ..|...|.+
T Consensus 443 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 522 (694)
T 3dm0_A 443 QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSC 522 (694)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEE
T ss_pred CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEE
Confidence 999999999999999986 4567788899999999999999999999999999999998655333222 347788999
Q ss_pred EEecCCC---EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 363 VDWRNNV---SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 363 v~~~~~~---~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
+.|+++. .+++++.|+.|++||+++++....+.+|.+.|++++|+|+|++|++|+.||+|+|||+.+++++..+..
T Consensus 523 ~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~- 601 (694)
T 3dm0_A 523 VRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEA- 601 (694)
T ss_dssp EEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBC-
T ss_pred EEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecC-
Confidence 9998864 699999999999999999999999999999999999999999999999999999999999999988764
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
...|.+++|+|++. +++++.++.+++|+.
T Consensus 602 ~~~v~~~~~sp~~~--------~l~~~~~~~i~iwd~ 630 (694)
T 3dm0_A 602 NSVIHALCFSPNRY--------WLCAATEHGIKIWDL 630 (694)
T ss_dssp SSCEEEEEECSSSS--------EEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCCc--------EEEEEcCCCEEEEEC
Confidence 56799999999986 566777888999974
No 35
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.5e-33 Score=271.58 Aligned_cols=248 Identities=24% Similarity=0.341 Sum_probs=212.8
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+|+||.+.|++++|+|+ +++|||||.|++|+|||+.+..... ... .....+|...|++++|+|+|
T Consensus 31 ~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~--------~~~----~~~l~~h~~~V~~~~~s~dg 98 (340)
T 4aow_A 31 RGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY--------GIP----QRALRGHSHFVSDVVISSDG 98 (340)
T ss_dssp EEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS--------EEE----EEEECCCSSCEEEEEECTTS
T ss_pred EEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc--------cee----eEEEeCCCCCEEEEEECCCC
Confidence 3579999999999999997 6899999999999999998754321 111 12234577899999999999
Q ss_pred CEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE-EEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-QFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~-~~~~~~~~v~~v~ 364 (502)
++|++|+.||.|++|+... ........+...+..+.+++++++|++++.|+.+++||+....... ....|...+..+.
T Consensus 99 ~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~ 178 (340)
T 4aow_A 99 QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVR 178 (340)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEE
T ss_pred CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceE
Confidence 9999999999999999774 4555666788889999999999999999999999999987655433 3456788899999
Q ss_pred ecCC---CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 365 WRNN---VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 365 ~~~~---~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
|.++ ..+++++.|+.|++||+.+++.+..+.+|.+.|++++|+|++++|++|+.||.|++||+++.+++..+..+ .
T Consensus 179 ~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~ 257 (340)
T 4aow_A 179 FSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-D 257 (340)
T ss_dssp ECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-S
T ss_pred EccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-c
Confidence 8654 45789999999999999999999999999999999999999999999999999999999999999888754 5
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.|.+++|+|++. +++++.++.+++|+.
T Consensus 258 ~v~~~~~~~~~~--------~~~~~~d~~i~iwd~ 284 (340)
T 4aow_A 258 IINALCFSPNRY--------WLCAATGPSIKIWDL 284 (340)
T ss_dssp CEEEEEECSSSS--------EEEEEETTEEEEEET
T ss_pred eEEeeecCCCCc--------eeeccCCCEEEEEEC
Confidence 799999999875 788888999999964
No 36
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-34 Score=281.00 Aligned_cols=250 Identities=19% Similarity=0.354 Sum_probs=209.8
Q ss_pred eCCCceEEeccCCCceEEEEEcCC---CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEE
Q 010754 203 IPNSDVTILEGHTSEVCACAWSPA---GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 279 (502)
Q Consensus 203 ~~~~~~~~l~~H~~~V~~~~~~p~---~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 279 (502)
.+...+..+.+|.+.|++++|+|+ |++|++|+.||.|++|++.+.... .......|...|++
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~---------------~~~~~~~h~~~v~~ 91 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT---------------IPKAQQMHTGPVLD 91 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE---------------EEEEEEECSSCEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce---------------eEEEeccccCCEEE
Confidence 345567889999999999999998 699999999999999999873210 11122346788999
Q ss_pred EEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEE--ecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 280 LDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKW--NKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 280 l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
++|+|++++|++|+.||.|++||+.......+..|...|.+++| +|++++|++++.||.|++||+++++.+..+..+.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999988777778889999999999 8899999999999999999999988777666443
Q ss_pred C-----------------------------------------CeEEEEec--C---CCEEEEEeCCCeEEEEEcCCC---
Q 010754 358 G-----------------------------------------PTLDVDWR--N---NVSFATSSTDNMIYVCKIGEN--- 388 (502)
Q Consensus 358 ~-----------------------------------------~v~~v~~~--~---~~~~~~~~~d~~i~i~d~~~~--- 388 (502)
. .+..+.+. . ...+++++.|+.|++|+++..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~ 251 (368)
T 3mmy_A 172 RCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPA 251 (368)
T ss_dssp CEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHH
T ss_pred CceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCcc
Confidence 1 12222221 1 122899999999999999988
Q ss_pred cceEEEecCCC------------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCC
Q 010754 389 RPIKTFAGHQG------------EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTN 456 (502)
Q Consensus 389 ~~~~~~~~h~~------------~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~ 456 (502)
..+..+.+|.. .|++++|+|++++|++|+.||.|+|||+.+++++..+.+|..+|++++|+|+|.
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~--- 328 (368)
T 3mmy_A 252 KDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGN--- 328 (368)
T ss_dssp HHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSS---
T ss_pred ccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCC---
Confidence 56788888876 799999999999999999999999999999999999999999999999999998
Q ss_pred CCCccEEEEeecCceEEE
Q 010754 457 NPNQQLILARLIPYFLYW 474 (502)
Q Consensus 457 ~~~~~l~las~~~~~~iw 474 (502)
.+++++.++..+.|
T Consensus 329 ----~l~~~s~d~~~~~~ 342 (368)
T 3mmy_A 329 ----IFAYASSYDWSKGH 342 (368)
T ss_dssp ----CEEEEECCCSTTCG
T ss_pred ----eEEEEecccccccc
Confidence 77888877654443
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-33 Score=271.70 Aligned_cols=246 Identities=20% Similarity=0.337 Sum_probs=211.9
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....|.+|.+.|++++|+|++++|++|+.||.|++||+.+++.. .....|...|++++|+|++
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~~~~~~~~ 86 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERL-----------------GTLDGHTGTIWSIDVDCFT 86 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECTTS
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhh-----------------hhhhhcCCcEEEEEEcCCC
Confidence 34678999999999999999999999999999999999876532 1123467789999999999
Q ss_pred CEEEEEECCCeEEEEECCCc-eEEEec-----------------------------------------------------
Q 010754 287 TLLATGSYDGQARIWSTNGD-LKCTLS----------------------------------------------------- 312 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~-~~~~~~----------------------------------------------------- 312 (502)
++|++++.||.|++||+... ....+.
T Consensus 87 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~ 166 (369)
T 3zwl_B 87 KYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPI 166 (369)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeeccccccee
Confidence 99999999999999997532 211111
Q ss_pred ----CccC--CeEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEE
Q 010754 313 ----KHKG--PIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCK 384 (502)
Q Consensus 313 ----~~~~--~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d 384 (502)
.|.. .+.+++|+|++++|++++.||.|++||+++ +..+..+..|...+.+++|++++ .|++++.|+.|++||
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 167 HKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVD 246 (369)
T ss_dssp EEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred eeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEE
Confidence 1111 677888888888899999999999999988 78888888899999999998765 588999999999999
Q ss_pred cCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC--------------cEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 385 IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--------------TAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 385 ~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg--------------~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
+.+++.+..+. +...+.+++|+|+++++++++.++ .+++||..+++.+..+.+|...|++++|+|
T Consensus 247 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~ 325 (369)
T 3zwl_B 247 VSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISP 325 (369)
T ss_dssp TTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECT
T ss_pred CCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECC
Confidence 99999998888 788999999999999999999988 899999999999999999999999999999
Q ss_pred CCCCCCCCCccEEEEeecCceEEEEee
Q 010754 451 TGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 451 ~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|. .+++++.|+.+++|...
T Consensus 326 ~~~-------~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 326 QGT-------SYASGGEDGFIRLHHFE 345 (369)
T ss_dssp TSS-------EEEEEETTSEEEEEEEC
T ss_pred CCC-------EEEEEcCCCeEEEEECc
Confidence 998 78888889999999764
No 38
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=6.3e-34 Score=301.35 Aligned_cols=260 Identities=22% Similarity=0.369 Sum_probs=220.8
Q ss_pred ccccCCCCceeeeCC---------CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeE
Q 010754 191 DIATTSASESFEIPN---------SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVL 261 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~---------~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~ 261 (502)
.+.+.+.+..+.++. ...+.+.+|...|.+++|+|++++|++|+.|++|+|||+.++...
T Consensus 397 ~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~----------- 465 (694)
T 3dm0_A 397 IIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVST----------- 465 (694)
T ss_dssp EEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-----------
T ss_pred EEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcce-----------
Confidence 355666666665542 124678999999999999999999999999999999999876421
Q ss_pred EEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEe----cCccCCeEEEEEecCC--CEEEEEec
Q 010754 262 VLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL----SKHKGPIFSLKWNKKG--DYLLTGSC 335 (502)
Q Consensus 262 ~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~----~~~~~~v~~l~~~~~~--~~l~s~~~ 335 (502)
....+|...|++++|+|++++|++|+.|+.|++||..+.....+ .+|...|.+++|+|++ ..|++++.
T Consensus 466 ------~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~ 539 (694)
T 3dm0_A 466 ------RRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW 539 (694)
T ss_dssp ------EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred ------eEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC
Confidence 12245778899999999999999999999999999877655544 4688899999999987 68999999
Q ss_pred CCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE
Q 010754 336 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 414 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la 414 (502)
|++|++||++++++...+..|...|.+++|+++ ..+++++.|+.|++||+.+++.+..+. +...|.+++|+|++.+|+
T Consensus 540 d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~ 618 (694)
T 3dm0_A 540 DKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLE-ANSVIHALCFSPNRYWLC 618 (694)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCB-CSSCEEEEEECSSSSEEE
T ss_pred CCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEec-CCCcEEEEEEcCCCcEEE
Confidence 999999999999999999999999999999876 468899999999999999999888776 456799999999999888
Q ss_pred EEeCCCcEEEEECCCCeeEEEeccCC-------------------CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 415 SCSDDVTAKIWNMKQDKYVHDLREHS-------------------KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~~~~~~~~~h~-------------------~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++. +.|+|||+.+++++..+..+. ..|++++|||+|. .|++++.|+.+++|.
T Consensus 619 ~~~~-~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-------~l~sgs~Dg~i~iW~ 690 (694)
T 3dm0_A 619 AATE-HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-------TLFSGYTDGVIRVWG 690 (694)
T ss_dssp EEET-TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTTSS-------EEEEEETTSEEEEEE
T ss_pred EEcC-CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCC-------EEEEEcCCCeEEEEe
Confidence 7765 559999999999888775332 1378999999998 888899999999997
Q ss_pred e
Q 010754 476 C 476 (502)
Q Consensus 476 ~ 476 (502)
.
T Consensus 691 i 691 (694)
T 3dm0_A 691 I 691 (694)
T ss_dssp C
T ss_pred c
Confidence 5
No 39
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-34 Score=298.97 Aligned_cols=237 Identities=22% Similarity=0.332 Sum_probs=209.0
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
.+.+.+.+++|+|+|++||+++. ++|++|++.++... ....+|...|++++|+|+|++||+|
T Consensus 16 ~~~g~~~~~~~spdg~~l~~~~~-~~v~l~~~~~~~~~-----------------~~~~~h~~~v~~~~~spdg~~lasg 77 (611)
T 1nr0_A 16 TARGTAVVLGNTPAGDKIQYCNG-TSVYTVPVGSLTDT-----------------EIYTEHSHQTTVAKTSPSGYYCASG 77 (611)
T ss_dssp CCTTCCCCCEECTTSSEEEEEET-TEEEEEETTCSSCC-----------------EEECCCSSCEEEEEECTTSSEEEEE
T ss_pred cccCceeEEeeCCCCCEEEeCCC-CEEEEecCCCcccC-----------------eEecCCCCceEEEEECCCCcEEEEE
Confidence 34677889999999999999984 69999999765421 1234577889999999999999999
Q ss_pred ECCCeEEEEECC---CceEEEecCccCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 293 SYDGQARIWSTN---GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 293 ~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d----~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
+.||.|+|||+. ......+..|.++|.+++|+|++++|++++.+ +.|++|| ++.....+.+|...|.+++|
T Consensus 78 ~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~~~v~~v~f 155 (611)
T 1nr0_A 78 DVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGRERFGHVFLFD--TGTSNGNLTGQARAMNSVDF 155 (611)
T ss_dssp ETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCSSCSEEEEETT--TCCBCBCCCCCSSCEEEEEE
T ss_pred eCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCCCceeEEEEee--CCCCcceecCCCCCceEEEE
Confidence 999999999974 23456778899999999999999999998875 4788887 46667778899999999999
Q ss_pred cCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec------
Q 010754 366 RNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR------ 437 (502)
Q Consensus 366 ~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~------ 437 (502)
+|++ .+++++.|++|++||..+++.+.++.+|...|++++|+|+|++||+|+.|++|+|||+.+++++..+.
T Consensus 156 ~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~ 235 (611)
T 1nr0_A 156 KPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKN 235 (611)
T ss_dssp CSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSS
T ss_pred CCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccc
Confidence 9875 59999999999999999999999999999999999999999999999999999999999999988884
Q ss_pred -cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 438 -EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 438 -~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+|...|++++|+|+|. .+++++.|+.+++|+.
T Consensus 236 ~~h~~~V~~v~~spdg~-------~l~s~s~D~~v~lWd~ 268 (611)
T 1nr0_A 236 VAHSGSVFGLTWSPDGT-------KIASASADKTIKIWNV 268 (611)
T ss_dssp CSSSSCEEEEEECTTSS-------EEEEEETTSEEEEEET
T ss_pred cccCCCEEEEEECCCCC-------EEEEEeCCCeEEEEeC
Confidence 7999999999999998 7888999999999974
No 40
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-35 Score=289.38 Aligned_cols=243 Identities=16% Similarity=0.212 Sum_probs=199.7
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.++.|.++|++++|+|++++|++|+.|+.|+||++.++.. ........|...|++++|+|++++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW---------------KHARTFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE---------------EECCCBCCCSSCEEEEEECTTTCCE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce---------------EEEEEEecCCceEEEEEEeCCCCEE
Confidence 4455778999999999999999999999999999987520 1223344678899999999999999
Q ss_pred EEEECCCeEEEEECCCce----EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc---eEEEEee-ccCCeE
Q 010754 290 ATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE---WKQQFEF-HSGPTL 361 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~---~~~~~~~-~~~~v~ 361 (502)
++|+.||.|++||+.... ...+..|...|.+++|+|++++|++++.|+.|++||+++++ ....+.. |...|.
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~ 150 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTIL 150 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEE
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeE
Confidence 999999999999987543 67788899999999999999999999999999999999887 4677777 999999
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEEcC------------------CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 362 DVDWRNNV-SFATSSTDNMIYVCKIG------------------ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 362 ~v~~~~~~-~~~~~~~d~~i~i~d~~------------------~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
+++|++++ .+++++.|+.|++||+. .++++..+ +|...|++++|+|++++|++|+.||.|
T Consensus 151 ~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i 229 (377)
T 3dwl_C 151 SLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSV 229 (377)
T ss_dssp EEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEE
T ss_pred EEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcE
Confidence 99998764 68999999999999985 24456666 899999999999999999999999999
Q ss_pred EEEECCCCee----EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 423 KIWNMKQDKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 423 ~iwd~~~~~~----~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++||+.++++ +..+.+|..+|.+++|+|+|. .++ ++.++.+.+|..
T Consensus 230 ~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~-~~~~~~~~~~~~ 279 (377)
T 3dwl_C 230 TIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-------IVA-AGYNYSPILLQG 279 (377)
T ss_dssp C-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-------EEE-EESSSSEEEECC
T ss_pred EEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-------EEE-EEcCCcEEEEEe
Confidence 9999999987 788889999999999999987 433 344555556654
No 41
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.4e-33 Score=273.43 Aligned_cols=262 Identities=17% Similarity=0.294 Sum_probs=219.8
Q ss_pred CceEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
.....+.+|.+.|++++|+| ++++|++|+.||.|++|++.++......... ............|...|++++|+|
T Consensus 34 ~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~ 109 (408)
T 4a11_B 34 KDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCK----AVCSIGRDHPDVHRYSVETVQWYP 109 (408)
T ss_dssp TTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEEC----EEEEECTTCTTCCSSCEEEEEECT
T ss_pred cceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecc----ccccccccccccCCCcEEEEEEcc
Confidence 34567889999999999999 9999999999999999999987643321110 011111223345788999999999
Q ss_pred -CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCC---CEEEEEecCCeEEEEEcCCCceEEEEeeccCCe
Q 010754 285 -EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 360 (502)
Q Consensus 285 -~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v 360 (502)
++.+|++++.||.|++||+..........+...+.++.|+|.+ .++++++.|+.|++||+++++.+..+..|...|
T Consensus 110 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v 189 (408)
T 4a11_B 110 HDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEI 189 (408)
T ss_dssp TCTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCE
T ss_pred CCCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcE
Confidence 7889999999999999998876655555688899999999854 599999999999999999999999999999999
Q ss_pred EEEEecCCC--EEEEEeCCCeEEEEEcCCCc-ceEEE---------------ecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 361 LDVDWRNNV--SFATSSTDNMIYVCKIGENR-PIKTF---------------AGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 361 ~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~-~~~~~---------------~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
.+++|++++ .+++++.||.|++||++.+. ++..+ .+|...|++++|+|++++|++++.||.|
T Consensus 190 ~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 269 (408)
T 4a11_B 190 LAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRM 269 (408)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeE
Confidence 999998876 48899999999999998775 44444 5788999999999999999999999999
Q ss_pred EEEECCCC-----------------------------------------------eeEEEeccCCCcEEEEEEccCCCCC
Q 010754 423 KIWNMKQD-----------------------------------------------KYVHDLREHSKEIYTIRWSPTGSGT 455 (502)
Q Consensus 423 ~iwd~~~~-----------------------------------------------~~~~~~~~h~~~i~~v~~sp~g~~~ 455 (502)
++||+.++ +++..+.+|..+|++++|+|+|.
T Consensus 270 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~-- 347 (408)
T 4a11_B 270 RLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQ-- 347 (408)
T ss_dssp EEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTT--
T ss_pred EEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCC--
Confidence 99998654 45666778999999999999998
Q ss_pred CCCCccEEEEeecCceEEEEeee
Q 010754 456 NNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 456 ~~~~~~l~las~~~~~~iw~~~~ 478 (502)
.+++++.|+.+++|....
T Consensus 348 -----~l~s~~~dg~i~iw~~~~ 365 (408)
T 4a11_B 348 -----ELYSGSRDCNILAWVPSL 365 (408)
T ss_dssp -----EEEEEETTSCEEEEEECC
T ss_pred -----EEEEECCCCeEEEEeCCC
Confidence 788888899999998654
No 42
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=9.9e-34 Score=276.36 Aligned_cols=246 Identities=16% Similarity=0.215 Sum_probs=211.3
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.+..|.++|++++|+|++++|++|+.|+.|++|++.+++. ... .....|...|++++|+|++++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~-----------~~~----~~~~~h~~~v~~~~~~~~~~~l 67 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKW-----------VQV----HELKEHNGQVTGVDWAPDSNRI 67 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEE-----------EEE----EEEECCSSCEEEEEEETTTTEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcE-----------Eee----eeecCCCCcccEEEEeCCCCEE
Confidence 3556999999999999999999999999999999887531 011 1223567889999999999999
Q ss_pred EEEECCCeEEEEECCCce---EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce---EEEE-eeccCCeEE
Q 010754 290 ATGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW---KQQF-EFHSGPTLD 362 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~~---~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~-~~~~~~v~~ 362 (502)
++|+.||.|++||+.... ...+..|...|.+++|+|++++|++++.|+.|++||++.+.. ...+ ..|...+.+
T Consensus 68 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~ 147 (372)
T 1k8k_C 68 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLS 147 (372)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEE
T ss_pred EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeE
Confidence 999999999999986543 334467999999999999999999999999999999988763 2333 457889999
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEc------------------CCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEE
Q 010754 363 VDWRNNV-SFATSSTDNMIYVCKI------------------GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 423 (502)
Q Consensus 363 v~~~~~~-~~~~~~~d~~i~i~d~------------------~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~ 423 (502)
+.|++++ .+++++.|+.|++||+ ..++.+..+.+|...|++++|+|++++|++++.||.|+
T Consensus 148 ~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 227 (372)
T 1k8k_C 148 LDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVC 227 (372)
T ss_dssp EEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEE
T ss_pred EEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEE
Confidence 9998764 6889999999999995 36778888989999999999999999999999999999
Q ss_pred EEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 424 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 424 iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
+||+++++++..+..|..+|.+++|+|+|. +++++.++.+++|...-
T Consensus 228 i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~l~~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 228 LADADKKMAVATLASETLPLLAVTFITESS--------LVAAGHDCFPVLFTYDS 274 (372)
T ss_dssp EEEGGGTTEEEEEECSSCCEEEEEEEETTE--------EEEEETTSSCEEEEEET
T ss_pred EEECCCCceeEEEccCCCCeEEEEEecCCC--------EEEEEeCCeEEEEEccC
Confidence 999999999999999999999999999986 45555889999998654
No 43
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.6e-33 Score=276.53 Aligned_cols=244 Identities=14% Similarity=0.169 Sum_probs=206.5
Q ss_pred ceEEeccCCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-
Q 010754 207 DVTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 284 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~- 284 (502)
....+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.++.... .....+|...|.+++|+|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------~~~~~~h~~~v~~~~~~~~ 129 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS---------------FIQGMGPGDAITGMKFNQF 129 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE---------------EECCCSTTCBEEEEEEETT
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce---------------eeecCCcCCceeEEEeCCC
Confidence 456789999999999999998 999999999999999998765321 111235678899999999
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
++++|++|+.||.|++||+.+.....+..+. ..|.+++|+|++++|++++.|+.|++||+ +++.+..+..|...|.
T Consensus 130 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~ 208 (383)
T 3ei3_B 130 NTNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVT 208 (383)
T ss_dssp EEEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEE
T ss_pred CCCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEE
Confidence 7899999999999999999987777665544 88999999999999999999999999999 5778888999999999
Q ss_pred EEEecCCC--EEEEEeCCCeEEEEEcCC----CcceEEEecCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 362 DVDWRNNV--SFATSSTDNMIYVCKIGE----NRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 362 ~v~~~~~~--~~~~~~~d~~i~i~d~~~----~~~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
+++|++++ .+++++.|+.|++||+++ +..+..+ +|...|++++|+| ++++|++++.||.|++||+++++++.
T Consensus 209 ~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 209 HAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPD 287 (383)
T ss_dssp EEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCS
T ss_pred EEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccc
Confidence 99998876 689999999999999998 5566666 6999999999999 99999999999999999999988776
Q ss_pred EeccCC-------C----------cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 435 DLREHS-------K----------EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 435 ~~~~h~-------~----------~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+.+|. . .+..++|+|+|. + +++.++.+++|+.
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~--------~-s~s~d~~i~iwd~ 337 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQ--------L-LLNDKRTIDIYDA 337 (383)
T ss_dssp EEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTT--------T-CTTCCCCEEEEET
T ss_pred ccccccccccccccceEEeccCCCCceEEEecCCcc--------c-ccCCCCeEEEEec
Confidence 666443 2 334455555554 2 6778899999974
No 44
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.5e-33 Score=276.41 Aligned_cols=238 Identities=18% Similarity=0.314 Sum_probs=212.1
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
|.+.|++++|+|++++|++|+.||.|++|+. ++.. ......|...|++++|+|++++|++++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~-~~~~-----------------~~~~~~~~~~v~~~~~~~~~~~l~~~~ 168 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNK-TGAL-----------------LNVLNFHRAPIVSVKWNKDGTHIISMD 168 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEET-TSCE-----------------EEEECCCCSCEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeC-CCCe-----------------eeeccCCCccEEEEEECCCCCEEEEEe
Confidence 7889999999999999999999999999993 3221 111234677899999999999999999
Q ss_pred CCCeEEEEECCCc-eE--------------------------------------------------------EEecCccC
Q 010754 294 YDGQARIWSTNGD-LK--------------------------------------------------------CTLSKHKG 316 (502)
Q Consensus 294 ~dg~i~iwd~~~~-~~--------------------------------------------------------~~~~~~~~ 316 (502)
.||.|++||+... .. ..+..|..
T Consensus 169 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~ 248 (425)
T 1r5m_A 169 VENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHG 248 (425)
T ss_dssp TTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSS
T ss_pred cCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCC
Confidence 9999999997532 11 23446788
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEec
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 396 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 396 (502)
.|.+++|+|++++|++++.|+.|++||+++++.+..+..|...+.++.|++++.+++++.|+.|++||+.+++.+..+..
T Consensus 249 ~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 249 PISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp CEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEeEeccc
Confidence 99999999999999999999999999999999999999999999999999888999999999999999999999999999
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe--------------------eEEEeccCCC--cEEEEEEccCCCC
Q 010754 397 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--------------------YVHDLREHSK--EIYTIRWSPTGSG 454 (502)
Q Consensus 397 h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~--------------------~~~~~~~h~~--~i~~v~~sp~g~~ 454 (502)
|...|.+++|+|++++|++++.||.|++||+.+++ ++..+.+|.. .|++++|+|+|.
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~- 407 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGN- 407 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSS-
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCc-
Confidence 99999999999999999999999999999999888 8899999976 999999999998
Q ss_pred CCCCCccEEEEeecCceEEEEe
Q 010754 455 TNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 455 ~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+++++.++.+++|..
T Consensus 408 ------~l~~~~~dg~i~iw~~ 423 (425)
T 1r5m_A 408 ------KISVAYSLQEGSVVAI 423 (425)
T ss_dssp ------EEEEEESSSCCEEEEC
T ss_pred ------eEEEEecCceEEEEee
Confidence 7888999999999975
No 45
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.5e-33 Score=277.90 Aligned_cols=258 Identities=16% Similarity=0.180 Sum_probs=216.9
Q ss_pred ceEEeccCCCceEEEEEcCC----C---CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccC-----C
Q 010754 207 DVTILEGHTSEVCACAWSPA----G---SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK-----S 274 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~----~---~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 274 (502)
.+..+.+|...|.+++|+|+ + .+|++++.|+.|++|++.++.... ...... ...| .
T Consensus 54 ~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~--------~~~~~~----~~~~~~~~~~ 121 (397)
T 1sq9_A 54 KSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETK--------KVIFEK----LDLLDSDMKK 121 (397)
T ss_dssp GEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTC--------CEEEEE----ECCSCTTGGG
T ss_pred cceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccc--------ccccee----ecccccccCC
Confidence 47888999999999999999 9 999999999999999998765310 000111 1223 4
Q ss_pred CCeEEEEEC----CCCCE-EEEEECCCeEEEEECCC-------ceEE-----Ee-------cCccCCeEEEEEecCCCEE
Q 010754 275 KDVTTLDWN----GEGTL-LATGSYDGQARIWSTNG-------DLKC-----TL-------SKHKGPIFSLKWNKKGDYL 330 (502)
Q Consensus 275 ~~v~~l~~s----~~g~~-l~s~~~dg~i~iwd~~~-------~~~~-----~~-------~~~~~~v~~l~~~~~~~~l 330 (502)
..|.+++|+ |++++ |++|+.||.|++||+.. .... .+ ..|...|.+++|+|++ +|
T Consensus 122 ~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l 200 (397)
T 1sq9_A 122 HSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LI 200 (397)
T ss_dssp SCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EE
T ss_pred CcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eE
Confidence 789999999 99999 99999999999999765 3333 44 4588999999999999 99
Q ss_pred EEEecCCeEEEEEcCCCceEEEEee---c---cCCeEEEEecCC-CEEEEEeCC---CeEEEEEcCCCcceEEEec----
Q 010754 331 LTGSCDKTAIVWDVKTEEWKQQFEF---H---SGPTLDVDWRNN-VSFATSSTD---NMIYVCKIGENRPIKTFAG---- 396 (502)
Q Consensus 331 ~s~~~d~~i~~wd~~~~~~~~~~~~---~---~~~v~~v~~~~~-~~~~~~~~d---~~i~i~d~~~~~~~~~~~~---- 396 (502)
++++.|+.|++||+++++.+..+.. | ...+.+++|+++ ..+++++.| +.|++||+.+++++..+.+
T Consensus 201 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~ 280 (397)
T 1sq9_A 201 ATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHS 280 (397)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---
T ss_pred EEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccc
Confidence 9999999999999999999999998 8 999999999875 568888889 9999999999999999998
Q ss_pred ---------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec------cC---------------CCcEEEE
Q 010754 397 ---------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR------EH---------------SKEIYTI 446 (502)
Q Consensus 397 ---------h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~------~h---------------~~~i~~v 446 (502)
|...|.+++|+|++++|++++.||.|+|||+.+++++..+. +| ..+|+++
T Consensus 281 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~ 360 (397)
T 1sq9_A 281 SQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDV 360 (397)
T ss_dssp -----CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEE
T ss_pred ccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEE
Confidence 99999999999999999999999999999999999999999 88 9999999
Q ss_pred EEccCCCCCC---CCCccEEEEeecCceEEEEee
Q 010754 447 RWSPTGSGTN---NPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 447 ~~sp~g~~~~---~~~~~l~las~~~~~~iw~~~ 477 (502)
+|+|+|.... .....+++++.|+.+++|...
T Consensus 361 ~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 361 KFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp EEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred EeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 9999983110 111367888889999999754
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.5e-32 Score=261.28 Aligned_cols=243 Identities=19% Similarity=0.343 Sum_probs=216.8
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|...|.+++|+|++.+|++|+.|+.|++|++....... .......|...|.+++| ++
T Consensus 51 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~--------------~~~~~~~~~~~i~~~~~--~~ 114 (313)
T 3odt_A 51 LGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGED--------------PLYTLIGHQGNVCSLSF--QD 114 (313)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSC--------------C-CEECCCSSCEEEEEE--ET
T ss_pred EEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCC--------------cccchhhcccCEEEEEe--cC
Confidence 366788999999999999999999999999999999998753211 11222456788999999 57
Q ss_pred CEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEee-ccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-HSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~v~ 364 (502)
+++++|+.||.|++|| .+.....+..|...|.+++|+| +++++++++.||.|++|| ..+....+.. +...+.++.
T Consensus 115 ~~l~~~~~d~~i~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~ 191 (313)
T 3odt_A 115 GVVISGSWDKTAKVWK-EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLA 191 (313)
T ss_dssp TEEEEEETTSEEEEEE-TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEE
T ss_pred CEEEEEeCCCCEEEEc-CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEE
Confidence 8999999999999999 6777788889999999999998 899999999999999999 5566777777 888999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 365 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 365 ~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
|++++.+++++.|+.|++||+++++++..+.+|...|++++|+|++ .|++++.||.|++||+.+++++..+..|..+|+
T Consensus 192 ~~~~~~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~ 270 (313)
T 3odt_A 192 VVDDGHFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIW 270 (313)
T ss_dssp EEETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEE
T ss_pred EcCCCeEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCEEEEEECCCCceeEEEeccCceEE
Confidence 9998889999999999999999999999999999999999999999 588999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++|+|+|. +++++.|+.+++|...
T Consensus 271 ~~~~~~~~~--------~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 271 SVDCMSNGD--------IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp EEEECTTSC--------EEEEETTSCEEEEESC
T ss_pred EEEEccCCC--------EEEEeCCCcEEEEeCC
Confidence 999999986 6788899999999753
No 47
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2e-32 Score=263.06 Aligned_cols=245 Identities=16% Similarity=0.288 Sum_probs=214.7
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
...+|...|++++|+|++++|++++ ||.|++|++.++...... ... ....|...|++++|+|++++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~-------~~~-----~~~~~~~~v~~~~~~~~~~~l 112 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPV-------SQL-----DCLNRDNYIRSCKLLPDGCTL 112 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCS-------EEE-----ECSCTTSBEEEEEECTTSSEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeee-------ecc-----cccCCCCcEEEEEEcCCCCEE
Confidence 3458999999999999999999998 999999999876532111 000 112456789999999999999
Q ss_pred EEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 290 ATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
++++.||.|++||+... ....+..|...|.+++|+|++++|++++.||.|++||+++++.+..+..|...+.+++|+
T Consensus 113 ~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~ 192 (337)
T 1gxr_A 113 IVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDIS 192 (337)
T ss_dssp EEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEC
T ss_pred EEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEEC
Confidence 99999999999998754 456777899999999999999999999999999999999999999999999999999998
Q ss_pred CCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 367 NNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 367 ~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
+++ .+++++.|+.|++||+++++.+..+. |...+.+++|+|++++|++++.||.|++||+.+++.. .+..|..+|.+
T Consensus 193 ~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~ 270 (337)
T 1gxr_A 193 NDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLS 270 (337)
T ss_dssp TTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEE
T ss_pred CCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeE
Confidence 765 68899999999999999999888876 7888999999999999999999999999999988764 56789999999
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++|+|+|. .+++++.++.+++|..
T Consensus 271 ~~~~~~~~-------~l~~~~~dg~i~~~~~ 294 (337)
T 1gxr_A 271 LKFAYCGK-------WFVSTGKDNLLNAWRT 294 (337)
T ss_dssp EEECTTSS-------EEEEEETTSEEEEEET
T ss_pred EEECCCCC-------EEEEecCCCcEEEEEC
Confidence 99999998 7788888899999974
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.4e-33 Score=278.14 Aligned_cols=250 Identities=18% Similarity=0.261 Sum_probs=214.9
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE- 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~- 285 (502)
....+.+|.+.|++++|+| ++|++|+.||+|++|++.++..... .. .......|...|++++|+|+
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~-----~~------~~~~~~~h~~~v~~~~~~~~~ 74 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENP-----KD------KSYSHFVHKSGLHHVDVLQAI 74 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCG-----GG------GEEEEECCTTCEEEEEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccC-----CC------cceEEecCCCcEEEEEEeccc
Confidence 3567889999999999998 8999999999999999987652110 00 01112356788999999999
Q ss_pred ---C---CEEEEEECCCeEEEEECCCce------EEEecCc-----cCCeEEEEEe----cCCCE-EEEEecCCeEEEEE
Q 010754 286 ---G---TLLATGSYDGQARIWSTNGDL------KCTLSKH-----KGPIFSLKWN----KKGDY-LLTGSCDKTAIVWD 343 (502)
Q Consensus 286 ---g---~~l~s~~~dg~i~iwd~~~~~------~~~~~~~-----~~~v~~l~~~----~~~~~-l~s~~~d~~i~~wd 343 (502)
+ ++|++++.||.|++|++.... ...+..| ...|.+++|+ |++++ |++++.||.|++||
T Consensus 75 ~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd 154 (397)
T 1sq9_A 75 ERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWK 154 (397)
T ss_dssp ETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEE
T ss_pred ccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEe
Confidence 9 999999999999999976443 7778888 5999999999 99999 99999999999999
Q ss_pred cCC------CceEE-----EEee-------ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEec---C---CC
Q 010754 344 VKT------EEWKQ-----QFEF-------HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG---H---QG 399 (502)
Q Consensus 344 ~~~------~~~~~-----~~~~-------~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~---h---~~ 399 (502)
+++ ++.+. .+.. |...+.+++|++++.+++++.|+.|++||+++++++..+.. | ..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~ 234 (397)
T 1sq9_A 155 FHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSN 234 (397)
T ss_dssp EESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCC
T ss_pred CCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCC
Confidence 998 66665 6643 78899999998877888899999999999999999999999 9 99
Q ss_pred cEEEEEEcCCCCEEEEEeCC---CcEEEEECCCCeeEEEecc-------------CCCcEEEEEEccCCCCCCCCCccEE
Q 010754 400 EVNCVKWDPTGSLLASCSDD---VTAKIWNMKQDKYVHDLRE-------------HSKEIYTIRWSPTGSGTNNPNQQLI 463 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~d---g~i~iwd~~~~~~~~~~~~-------------h~~~i~~v~~sp~g~~~~~~~~~l~ 463 (502)
.|.+++|+|++++|++++.| |.|++||+++++++..+.+ |...|.+++|+|+|. .++
T Consensus 235 ~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~ 307 (397)
T 1sq9_A 235 SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE-------TLC 307 (397)
T ss_dssp CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS-------EEE
T ss_pred ccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC-------EEE
Confidence 99999999999999999999 9999999999999999998 999999999999998 788
Q ss_pred EEeecCceEEEEe
Q 010754 464 LARLIPYFLYWIC 476 (502)
Q Consensus 464 las~~~~~~iw~~ 476 (502)
+++.++.+++|..
T Consensus 308 ~~~~dg~i~iwd~ 320 (397)
T 1sq9_A 308 SAGWDGKLRFWDV 320 (397)
T ss_dssp EEETTSEEEEEET
T ss_pred EEeCCCeEEEEEc
Confidence 8888999999975
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.3e-34 Score=279.94 Aligned_cols=238 Identities=18% Similarity=0.293 Sum_probs=206.2
Q ss_pred CCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCE
Q 010754 214 HTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTL 288 (502)
Q Consensus 214 H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~ 288 (502)
|...|++++|+|+ +.+|++|+.||.|++||+.+++.. . ....|...|++++|+| ++++
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~-------------~----~~~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCI-------------K----HYVGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEE-------------E----EEESCCSCEEEEEECSSCTTE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEe-------------e----eecCCCCcEEEEEECCCCCCE
Confidence 6688999999998 679999999999999999876521 1 1234678899999999 9999
Q ss_pred EEEEECCCeEEEEECCC-ceEEEe---cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe----------
Q 010754 289 LATGSYDGQARIWSTNG-DLKCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE---------- 354 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~-~~~~~~---~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~---------- 354 (502)
|++|+.||.|++||+.. .....+ ..|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 210 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKT 210 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGC
T ss_pred EEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCC
Confidence 99999999999999874 455555 6899999999999999999999999999999998876543332
Q ss_pred ------------------eccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc--------------eEEEecCCCcEE
Q 010754 355 ------------------FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--------------IKTFAGHQGEVN 402 (502)
Q Consensus 355 ------------------~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~--------------~~~~~~h~~~i~ 402 (502)
.|...|.++.|. +..+++++.|+.|++||+.+... +..+.+|...|+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 289 (366)
T 3k26_A 211 NRPFISQKIHFPDFSTRDIHRNYVDCVRWL-GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIW 289 (366)
T ss_dssp SSCCCCEEECCCSEEECSSCSSCCCEEEEE-TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSS
T ss_pred cccccceeeccCccccccCCcceEEEEEEc-CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEE
Confidence 388899999999 67899999999999999988754 788899999999
Q ss_pred EEEEcCC--CCEEEEEeCCCcEEEEECCCCe----eEEEeccC--CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 403 CVKWDPT--GSLLASCSDDVTAKIWNMKQDK----YVHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 403 ~l~~sp~--g~~las~s~dg~i~iwd~~~~~----~~~~~~~h--~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
+++|+|+ +++|++|+.||.|++||+.+++ ....+.+| ..+|++++|+|+|. .+++++.|+.+++|
T Consensus 290 ~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~s~~~dg~i~iw 362 (366)
T 3k26_A 290 YMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-------ILIAVCDDASIWRW 362 (366)
T ss_dssp CCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-------EEEEEETTSEEEEE
T ss_pred EEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-------eEEEEeCCCEEEEE
Confidence 9999999 9999999999999999999876 34477777 78999999999998 78888888999999
Q ss_pred Ee
Q 010754 475 IC 476 (502)
Q Consensus 475 ~~ 476 (502)
+.
T Consensus 363 d~ 364 (366)
T 3k26_A 363 DR 364 (366)
T ss_dssp EC
T ss_pred Ee
Confidence 75
No 50
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-33 Score=277.57 Aligned_cols=250 Identities=26% Similarity=0.539 Sum_probs=215.3
Q ss_pred ccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEec----CCCCccCCCCCCCceeEEEeeecCcc------ccCCCCeEEE
Q 010754 212 EGHTSEVCACAWSPAGS-LLASGSGDSTARIWTI----ADGTSNGGAQNGPLNVLVLKHVKGRT------NEKSKDVTTL 280 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~v~~l 280 (502)
..|.+.|++++|+|+++ +||+|+.||.|++|++ .+++... .......+.... ..|...|+++
T Consensus 42 ~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (425)
T 1r5m_A 42 IVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYW-------KLTIIAELRHPFALSASSGKTTNQVTCL 114 (425)
T ss_dssp EEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CE-------EEEEEEEEECCCCCC------CBCEEEE
T ss_pred eeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccc-------cccccccccccccccccccCCCCceEEE
Confidence 34669999999999999 9999999999999999 7655210 000111111111 2256689999
Q ss_pred EECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-
Q 010754 281 DWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP- 359 (502)
Q Consensus 281 ~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~- 359 (502)
+|+|++++|++|+.||.|++|+..+.....+..|...|.+++|+|++++|++++.|+.|++||+.+++.+..+..+...
T Consensus 115 ~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 194 (425)
T 1r5m_A 115 AWSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGG 194 (425)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC----
T ss_pred EEcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCc
Confidence 9999999999999999999999888899999999999999999999999999999999999999999999988877776
Q ss_pred --------------eEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 360 --------------TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 360 --------------v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
+.++.|.+++.+++++.++.|++||+.+++++..+.+|...|++++|+|++++|++++.||.|++|
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~ 274 (425)
T 1r5m_A 195 SSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIW 274 (425)
T ss_dssp -----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred cceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEE
Confidence 899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+++++++..+.+|...|.+++|+|++ .+++++.++.+++|+.
T Consensus 275 d~~~~~~~~~~~~~~~~i~~~~~~~~~--------~l~~~~~d~~i~i~d~ 317 (425)
T 1r5m_A 275 HGGNGNSQNCFYGHSQSIVSASWVGDD--------KVISCSMDGSVRLWSL 317 (425)
T ss_dssp CSSSBSCSEEECCCSSCEEEEEEETTT--------EEEEEETTSEEEEEET
T ss_pred ECCCCccceEecCCCccEEEEEECCCC--------EEEEEeCCCcEEEEEC
Confidence 999999999999999999999999986 4788888999999974
No 51
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=9.5e-33 Score=269.02 Aligned_cols=196 Identities=13% Similarity=0.083 Sum_probs=163.6
Q ss_pred CCCeEEEEECCCCCEEEEEE--CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 274 SKDVTTLDWNGEGTLLATGS--YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
...+.+++|+|||+++++|+ .|+.|+|||+..........|...|.+++|+|+|++|++++. +.+++|+..++..+.
T Consensus 133 ~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 133 DDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVTGSCIA 211 (365)
T ss_dssp TCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECS-SCEEEEETTTCCEEE
T ss_pred ccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccc-eeEEEEEeccCccee
Confidence 34588999999999987655 689999999886544444458889999999999999999885 556777777776654
Q ss_pred EE--eeccCCeEEEEecCCCE-EEEEeCCC----eEEEEEcCCCcc----eEEEecCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 352 QF--EFHSGPTLDVDWRNNVS-FATSSTDN----MIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 352 ~~--~~~~~~v~~v~~~~~~~-~~~~~~d~----~i~i~d~~~~~~----~~~~~~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
.. ..|...+.++.|+|++. +++++.++ .+++|++..... ...+.+|...|++++|+|+|++||+|+.|+
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~ 291 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN 291 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC
Confidence 33 45777899999987665 66777766 688899877643 456788999999999999999999999999
Q ss_pred cEEEEECCCCeeEEEe-ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 421 TAKIWNMKQDKYVHDL-REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~-~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|+|||+.+++++..+ .+|..+|++|+|||||. .|+++|.|++++||...
T Consensus 292 ~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~-------~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 292 SIALVKLKDLSMSKIFKQAHSFAITEVTISPDST-------YVASVSAANTIHIIKLP 342 (365)
T ss_dssp CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSC-------EEEEEETTSEEEEEECC
T ss_pred EEEEEECCCCcEEEEecCcccCCEEEEEECCCCC-------EEEEEeCCCeEEEEEcC
Confidence 9999999999999885 68999999999999998 88889999999999863
No 52
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.9e-34 Score=285.18 Aligned_cols=216 Identities=17% Similarity=0.215 Sum_probs=179.6
Q ss_pred eEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-C
Q 010754 208 VTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-E 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~ 285 (502)
.....+|...|+|++|+| ++++||+|+.||+|+|||+.++... ......+|...|++|+|+| +
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~---------------~~~~~~gH~~~V~~l~f~p~~ 176 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP---------------TFIKGIGAGGSITGLKFNPLN 176 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC---------------EEECCCSSSCCCCEEEECSSC
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce---------------eEEEccCCCCCEEEEEEeCCC
Confidence 345678999999999999 5789999999999999999876421 1112346788999999998 7
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecC---ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEE
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
+++|++|+.||+|++||+++.....+.. +...+.+++|+|++++|++|+.||.|++||++. +.+..+..|...|.+
T Consensus 177 ~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 177 TNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTH 255 (435)
T ss_dssp TTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEE
T ss_pred CCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEe
Confidence 8999999999999999998776555443 344678999999999999999999999999864 556678889999999
Q ss_pred EEecCCC--EEEEEeCCCeEEEEEcCCCcceEE---EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 363 VDWRNNV--SFATSSTDNMIYVCKIGENRPIKT---FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 363 v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~---~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
++|+|.+ .+++++.|+.|++||+++.+.... ..+|...|++++|+|+|++|++|+.||.|+|||+.++.+...+.
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 9998753 588999999999999988764433 35799999999999999999999999999999998776555444
Q ss_pred cC
Q 010754 438 EH 439 (502)
Q Consensus 438 ~h 439 (502)
.|
T Consensus 336 ~~ 337 (435)
T 4e54_B 336 PH 337 (435)
T ss_dssp CC
T ss_pred cc
Confidence 33
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.1e-32 Score=259.69 Aligned_cols=239 Identities=16% Similarity=0.247 Sum_probs=209.7
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
+|...|.+++|+|++++|++++.|+.|++|++.+++.. .......|...|++++|+|++++|+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~---------------~~~~~~~~~~~i~~~~~~~~~~~l~~~ 159 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPR---------------IKAELTSSAPACYALAISPDSKVCFSC 159 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--E---------------EEEEEECSSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcc---------------eeeecccCCCceEEEEECCCCCEEEEE
Confidence 89999999999999999999999999999999875421 111223456789999999999999999
Q ss_pred ECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-E
Q 010754 293 SYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-S 370 (502)
Q Consensus 293 ~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~ 370 (502)
+.||.|++||+.. .....+..|...|.+++|+|++++|++++.|+.|++||+++++.+..+. +...+.++.|++++ .
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~ 238 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEW 238 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCE
Confidence 9999999999864 5667788899999999999999999999999999999999998887764 67789999997754 6
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
+++++.++.|++||+.++.. ..+..|...|++++|+|++++|++++.||.|++||+.+++.+... .|..+|.+++|+|
T Consensus 239 l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~s~ 316 (337)
T 1gxr_A 239 LAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDISV 316 (337)
T ss_dssp EEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEECT
T ss_pred EEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEECC
Confidence 88889999999999998765 467789999999999999999999999999999999999888554 4888999999999
Q ss_pred CCCCCCCCCccEEEEeecCceEEEEe
Q 010754 451 TGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 451 ~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+|. .+++++.++.+++|..
T Consensus 317 ~~~-------~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 317 DDK-------YIVTGSGDKKATVYEV 335 (337)
T ss_dssp TSC-------EEEEEETTSCEEEEEE
T ss_pred CCC-------EEEEecCCCeEEEEEE
Confidence 998 7888888999999975
No 54
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=8.9e-33 Score=269.57 Aligned_cols=250 Identities=18% Similarity=0.228 Sum_probs=211.7
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.+..+.+|...|.+++|+|++++|++++.|+.|++||+.+++.. .......|...|++++|+|++
T Consensus 44 ~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~---------------~~~~~~~~~~~v~~~~~~~~~ 108 (372)
T 1k8k_C 44 QVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWK---------------PTLVILRINRAARCVRWAPNE 108 (372)
T ss_dssp EEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEE---------------EEEECCCCSSCEEEEEECTTS
T ss_pred eeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeee---------------eeEEeecCCCceeEEEECCCC
Confidence 67788999999999999999999999999999999999765421 011123456789999999999
Q ss_pred CEEEEEECCCeEEEEECCCce-----EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc-----------------
Q 010754 287 TLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV----------------- 344 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~----------------- 344 (502)
++|++|+.||.|++||++... ......|...|.+++|+|++++|++++.||.|++||+
T Consensus 109 ~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~ 188 (372)
T 1k8k_C 109 KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSK 188 (372)
T ss_dssp SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSC
T ss_pred CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccc
Confidence 999999999999999976432 3334678999999999999999999999999999995
Q ss_pred -CCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcE
Q 010754 345 -KTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 422 (502)
Q Consensus 345 -~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i 422 (502)
..++.+..+..|...+.+++|++++ .+++++.|+.|++||+++++++..+..|...|++++|+|++.+|++| .||.|
T Consensus 189 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i 267 (372)
T 1k8k_C 189 MPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFP 267 (372)
T ss_dssp CCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSC
T ss_pred cchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeE
Confidence 4678888888899999999998765 78999999999999999999999999999999999999999988888 89999
Q ss_pred EEEECCC--Cee--------------------------------E------EEe-ccCCCcEEEEEEc-cCCCCCCCCCc
Q 010754 423 KIWNMKQ--DKY--------------------------------V------HDL-REHSKEIYTIRWS-PTGSGTNNPNQ 460 (502)
Q Consensus 423 ~iwd~~~--~~~--------------------------------~------~~~-~~h~~~i~~v~~s-p~g~~~~~~~~ 460 (502)
++|++.+ ++. . ..+ .+|..+|++++|+ ++|. ...
T Consensus 268 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~----~~~ 343 (372)
T 1k8k_C 268 VLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA----KCS 343 (372)
T ss_dssp EEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTT----SCS
T ss_pred EEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCc----cee
Confidence 9999987 431 0 233 3899999999977 5550 112
Q ss_pred cEEEEeecCceEEEEe
Q 010754 461 QLILARLIPYFLYWIC 476 (502)
Q Consensus 461 ~l~las~~~~~~iw~~ 476 (502)
.+++++.|+.+++|..
T Consensus 344 ~l~s~~~Dg~i~~W~~ 359 (372)
T 1k8k_C 344 QFCTTGMDGGMSIWDV 359 (372)
T ss_dssp EEEEEETTSEEEEEEH
T ss_pred eEEEecCCCceEEEEe
Confidence 7888888999999975
No 55
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-34 Score=302.45 Aligned_cols=248 Identities=26% Similarity=0.406 Sum_probs=210.8
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC--
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-- 285 (502)
+.++.+|.+.|++++|+|++++|++|+.||+|+||++.++.. .......+|...|++++|+|+
T Consensus 2 ~~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~---------------~~~~~l~~h~~~V~~l~~s~~~~ 66 (753)
T 3jro_A 2 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETH---------------KLIDTLTGHEGPVWRVDWAHPKF 66 (753)
T ss_dssp ------CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEE---------------EEEEEECCCSSCEEEEEECCTTS
T ss_pred eeecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCC---------------ccceeccCCcCceEEEEecCCCC
Confidence 357899999999999999999999999999999999874321 112233457789999999988
Q ss_pred CCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEcCCC--ceEEEEeeccC
Q 010754 286 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTE--EWKQQFEFHSG 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~ 358 (502)
+++|++|+.||.|++||+.+. ....+..|...|.+++|+|+ ++++++|+.||.|++||++++ .....+..|..
T Consensus 67 ~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~ 146 (753)
T 3jro_A 67 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (753)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS
T ss_pred CCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC
Confidence 999999999999999998764 56778889999999999999 999999999999999999877 34556678899
Q ss_pred CeEEEEecC--------------CCEEEEEeCCCeEEEEEcCCC----cceEEEecCCCcEEEEEEcCC---CCEEEEEe
Q 010754 359 PTLDVDWRN--------------NVSFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVNCVKWDPT---GSLLASCS 417 (502)
Q Consensus 359 ~v~~v~~~~--------------~~~~~~~~~d~~i~i~d~~~~----~~~~~~~~h~~~i~~l~~sp~---g~~las~s 417 (502)
.|.++.|++ +..+++++.||.|++||++++ .++..+.+|...|++++|+|+ +++|++|+
T Consensus 147 ~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s 226 (753)
T 3jro_A 147 GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVS 226 (753)
T ss_dssp CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEE
T ss_pred ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEe
Confidence 999999988 567999999999999999887 456778899999999999999 89999999
Q ss_pred CCCcEEEEECCCCe-----eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 418 DDVTAKIWNMKQDK-----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 418 ~dg~i~iwd~~~~~-----~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.||.|++||+.++. .+.....|...|++++|+|+|. .+++++.|+.+++|...
T Consensus 227 ~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~-------~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 227 QDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN-------VLALSGGDNKVTLWKEN 284 (753)
T ss_dssp SSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC-------CEEEECSSSCEECCBCC
T ss_pred cCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCC-------EEEEEcCCCEEEEEecC
Confidence 99999999998864 3334446889999999999998 78888999999999865
No 56
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-34 Score=281.04 Aligned_cols=247 Identities=18% Similarity=0.344 Sum_probs=214.1
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC-CCEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLA 290 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-g~~l~ 290 (502)
..|...|.+++|+|++.+|++|+.||.|++|++.+..... ........|...|++++|+|+ +++|+
T Consensus 64 ~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~-------------~~~~~~~~h~~~v~~~~~~~~~~~~l~ 130 (416)
T 2pm9_A 64 LQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI-------------NSMARFSNHSSSVKTVKFNAKQDNVLA 130 (416)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC-------------CEEEECCCSSSCCCEEEECSSSTTBEE
T ss_pred EecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc-------------cchhhccCCccceEEEEEcCCCCCEEE
Confidence 3689999999999999999999999999999998632100 011223456788999999998 89999
Q ss_pred EEECCCeEEEEECCCce-------EE---EecCccCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCceEEEEeec---
Q 010754 291 TGSYDGQARIWSTNGDL-------KC---TLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--- 356 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~-------~~---~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--- 356 (502)
+|+.||.|++||+.... .. ....|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+..+
T Consensus 131 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 131 SGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp EECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred EEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 99999999999987543 22 23578999999999998 789999999999999999999999888876
Q ss_pred ---cCCeEEEEecCCC--EEEEEeCCC---eEEEEEcCCC-cceEEEe-cCCCcEEEEEEcC-CCCEEEEEeCCCcEEEE
Q 010754 357 ---SGPTLDVDWRNNV--SFATSSTDN---MIYVCKIGEN-RPIKTFA-GHQGEVNCVKWDP-TGSLLASCSDDVTAKIW 425 (502)
Q Consensus 357 ---~~~v~~v~~~~~~--~~~~~~~d~---~i~i~d~~~~-~~~~~~~-~h~~~i~~l~~sp-~g~~las~s~dg~i~iw 425 (502)
...+.+++|++++ .+++++.|+ .|++||++++ .++..+. +|...|++++|+| ++++|++++.||.|++|
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 7889999998874 789999998 9999999986 6778888 8999999999999 99999999999999999
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|+++++++..+.+|...|++++|+|++. ..+++++.|+.+++|...
T Consensus 291 d~~~~~~~~~~~~~~~~v~~~~~s~~~~------~~l~s~~~d~~i~iw~~~ 336 (416)
T 2pm9_A 291 NPESAEQLSQFPARGNWCFKTKFAPEAP------DLFACASFDNKIEVQTLQ 336 (416)
T ss_dssp CSSSCCEEEEEECSSSCCCCEEECTTCT------TEEEECCSSSEEEEEESC
T ss_pred eCCCCccceeecCCCCceEEEEECCCCC------CEEEEEecCCcEEEEEcc
Confidence 9999999999999999999999999983 267777888999999754
No 57
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.6e-33 Score=271.63 Aligned_cols=245 Identities=14% Similarity=0.084 Sum_probs=212.5
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC-
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT- 287 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~- 287 (502)
....+|.+.|++++|+|++.+|++|+.|+.|++|++.++... .... ....|...|++++|+|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----------~~~~----~~~~~~~~v~~~~~~~~~~~ 70 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----------VDLL----QSLRYKHPLLCCNFIDNTDL 70 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----------EEEE----EEEECSSCEEEEEEEESSSE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----------ccce----eeeecCCceEEEEECCCCCc
Confidence 345689999999999999999999999999999999875410 0111 1124677899999999999
Q ss_pred EEEEEECCCeEEEEEC-CCceEEEecC--ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC---------CceEEEEee
Q 010754 288 LLATGSYDGQARIWST-NGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---------EEWKQQFEF 355 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~-~~~~~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~---------~~~~~~~~~ 355 (502)
+|++|+.||.|++||+ .......+.. |...|.+++|+| +++|++++.|+.|++||+++ ++++..+.
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence 9999999999999999 8877888888 999999999999 99999999999999999987 66666665
Q ss_pred ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCC-Cc--ceEEEecCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCC-
Q 010754 356 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NR--PIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD- 430 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~-~~--~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~~- 430 (502)
+...+.+++|+++. +++++.++.|++||+++ +. .......|...|.+++|+| ++++|++|+.||.|++|+++..
T Consensus 149 ~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 78899999999887 99999999999999998 54 3344556888999999999 9999999999999999999887
Q ss_pred -----eeEEEeccCCC---------cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 431 -----KYVHDLREHSK---------EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 431 -----~~~~~~~~h~~---------~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.+..+..|.. +|.+++|+|+|. .+++++.++.+++|+..
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~-------~l~~~~~dg~i~vwd~~ 281 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK-------FLYTAGSDGIISCWNLQ 281 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC-------CEEEEETTSCEEEEETT
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCC-------EEEEecCCceEEEEcCc
Confidence 77788887765 999999999998 78888889999999753
No 58
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.2e-33 Score=298.68 Aligned_cols=246 Identities=21% Similarity=0.319 Sum_probs=222.1
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
..+.+.+|.+.|.+++|+|++++||+|+.||.|+|||+.++... . ....|...|++++|+|++
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~-------------~----~~~~~~~~v~~~~~s~~~ 67 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEV-------------R----SIQVTETPVRAGKFIARK 67 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEE-------------E----EEECCSSCEEEEEEEGGG
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceE-------------E----EEecCCCcEEEEEEeCCC
Confidence 45788999999999999999999999999999999999876521 1 122467789999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~ 364 (502)
++|++|+.||.|++||+. +.....+..|...|.+++|+|++++|++++.||.|++||+.++ .....+..|...+.+++
T Consensus 68 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~ 147 (814)
T 3mkq_A 68 NWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVA 147 (814)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEE
Confidence 999999999999999976 5667788899999999999999999999999999999999887 67778888999999999
Q ss_pred ecC-C-CEEEEEeCCCeEEEEEcCCCcceEEEecCC-CcEEEEEEcC--CCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 365 WRN-N-VSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 365 ~~~-~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-~~i~~l~~sp--~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
|+| + ..+++++.||.|++||+.++.....+..+. ..+.+++|+| ++.+|++|+.||.|++||+.+++++..+.+|
T Consensus 148 ~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~ 227 (814)
T 3mkq_A 148 FNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGH 227 (814)
T ss_dssp EETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECC
T ss_pred EEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCC
Confidence 988 4 469999999999999999988888887665 8899999999 9999999999999999999999999999999
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..+|.+++|+|+|. .+++++.++.+++|..
T Consensus 228 ~~~v~~~~~~~~~~-------~l~~~~~dg~v~vwd~ 257 (814)
T 3mkq_A 228 MSNVSFAVFHPTLP-------IIISGSEDGTLKIWNS 257 (814)
T ss_dssp SSCEEEEEECSSSS-------EEEEEETTSCEEEEET
T ss_pred CCCEEEEEEcCCCC-------EEEEEeCCCeEEEEEC
Confidence 99999999999998 7788888999999964
No 59
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-32 Score=270.09 Aligned_cols=243 Identities=22% Similarity=0.372 Sum_probs=211.2
Q ss_pred eEEecc-CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~-H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+.. |...|.+++|+|++++|++|+.||.|++||+.+++.. . ....|...|.+++| ++
T Consensus 126 ~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~-------------~----~~~~~~~~v~~~~~--~~ 186 (401)
T 4aez_A 126 SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKL-------------R----TMAGHQARVGCLSW--NR 186 (401)
T ss_dssp EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-------------E----EECCCSSCEEEEEE--ET
T ss_pred eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEE-------------E----EecCCCCceEEEEE--CC
Confidence 344444 8999999999999999999999999999999876532 1 12356788999999 46
Q ss_pred CEEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 287 TLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
++|++|+.||.|++||++ ......+..|...|.+++|+|++++|++|+.|+.|++||++++..+..+..|...|.+++
T Consensus 187 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~ 266 (401)
T 4aez_A 187 HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVA 266 (401)
T ss_dssp TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEE
T ss_pred CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEE
Confidence 799999999999999986 456778889999999999999999999999999999999999999999999999999999
Q ss_pred ecCC--CEEEEEe--CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEE--Ee
Q 010754 365 WRNN--VSFATSS--TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVH--DL 436 (502)
Q Consensus 365 ~~~~--~~~~~~~--~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s--~dg~i~iwd~~~~~~~~--~~ 436 (502)
|+++ ..+++++ .|+.|++||+.+++++..+. +...|++++|+|++++|++++ .||.|+|||+.+++... .+
T Consensus 267 ~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 267 WCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp ECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEE
T ss_pred ECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEe
Confidence 9884 3455654 69999999999999998887 667899999999999999954 89999999999976554 46
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 437 REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.+|...|.+++|+|+|. .+++++.|+.+++|...
T Consensus 346 ~~h~~~v~~~~~s~dg~-------~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 346 PAHDTRVLYSALSPDGR-------ILSTAASDENLKFWRVY 379 (401)
T ss_dssp ECCSSCCCEEEECTTSS-------EEEEECTTSEEEEEECC
T ss_pred cCCCCCEEEEEECCCCC-------EEEEEeCCCcEEEEECC
Confidence 68999999999999998 78888889999999754
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-33 Score=286.26 Aligned_cols=259 Identities=12% Similarity=0.091 Sum_probs=201.3
Q ss_pred EEeccCCCceEEEEEcCC------CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 209 TILEGHTSEVCACAWSPA------GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~------~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
..+.+|.+.|.+++|+|+ +.+||+|+.||+|+|||+.++...... ............+|...|++++|
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~------~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV------FKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE------EECCCSCSEEECCTTTCEEEEEE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc------ceeecCceEEEEcCCCCEEEEEe
Confidence 456788999999999996 579999999999999999876432100 00000011123456788999999
Q ss_pred CCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEE--EEecCC-CEEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 283 NGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSL--KWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l--~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
++++ .|++|+.||+|++||++. .....+..|...|.++ .|+|++ .+|++|+.|++|+|||++++++...+..|.
T Consensus 275 s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 275 LSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp SSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred cCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 9864 899999999999999874 3345678999999999 578887 899999999999999999988777777665
Q ss_pred C--CeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----
Q 010754 358 G--PTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ----- 429 (502)
Q Consensus 358 ~--~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~----- 429 (502)
. .+.+++|+|+ ..+++++.|++|++||++++..+.++.+|.+.|++|+|+|+|++|++|+.||+|+|||+..
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~~~~~ 433 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARRLLHG 433 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSSTTTC
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHhhccc
Confidence 3 4788999984 5688999999999999999999889999999999999999999999999999999998521
Q ss_pred ---------------------------------------CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCc
Q 010754 430 ---------------------------------------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPY 470 (502)
Q Consensus 430 ---------------------------------------~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~ 470 (502)
+.++..+.+|..+|++|+|+|++. ....+..|+.++.
T Consensus 434 ~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~----~~~~lAsg~~~g~ 509 (524)
T 2j04_B 434 IKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSA----GGKCYAFSNSAGL 509 (524)
T ss_dssp C------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTT----TTTEEEEECTTSE
T ss_pred cccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCC----ccHHHHhhccCce
Confidence 112234456778888899999863 1124566666688
Q ss_pred eEEEEeee
Q 010754 471 FLYWICSI 478 (502)
Q Consensus 471 ~~iw~~~~ 478 (502)
+++|.+..
T Consensus 510 vrlw~l~~ 517 (524)
T 2j04_B 510 LTLEYLSL 517 (524)
T ss_dssp EEEEECSC
T ss_pred EEEEEccc
Confidence 99997644
No 61
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-34 Score=290.56 Aligned_cols=241 Identities=16% Similarity=0.103 Sum_probs=196.4
Q ss_pred CCCceEEEEEcCCC---------CeEEE-------------------EeCCCcEEEEecCCCCccCCCCCCCceeEEEee
Q 010754 214 HTSEVCACAWSPAG---------SLLAS-------------------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH 265 (502)
Q Consensus 214 H~~~V~~~~~~p~~---------~~l~s-------------------gs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 265 (502)
+.+.|.+++|+|++ ++||+ ++.|++|+||++.+++... .
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~----------~--- 198 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHC----------V--- 198 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCE----------E---
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCc----------e---
Confidence 56777788887765 45555 5678999999987754210 0
Q ss_pred ecCccccCCCCeEEEEECCC------CCEEEEEECCCeEEEEECCCce------------EEEecCccCCeEEEEEecCC
Q 010754 266 VKGRTNEKSKDVTTLDWNGE------GTLLATGSYDGQARIWSTNGDL------------KCTLSKHKGPIFSLKWNKKG 327 (502)
Q Consensus 266 ~~~~~~~~~~~v~~l~~s~~------g~~l~s~~~dg~i~iwd~~~~~------------~~~~~~~~~~v~~l~~~~~~ 327 (502)
.......|...|.+++|+|+ +.+||+|+.||+|+|||+.... ...+.+|...|++++|+++
T Consensus 199 ~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 199 KVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP- 277 (524)
T ss_dssp EEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-
T ss_pred EEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-
Confidence 00111234577999999996 5799999999999999986431 2367789999999999986
Q ss_pred CEEEEEecCCeEEEEEcCCCc-eEEEEeeccCCeEEE--EecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCC--c
Q 010754 328 DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDV--DWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQG--E 400 (502)
Q Consensus 328 ~~l~s~~~d~~i~~wd~~~~~-~~~~~~~~~~~v~~v--~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~--~ 400 (502)
..|++|+.||+|++||++++. +...+..|...|.+| .|+++ ..|++++.|++|++||+++++++.++.+|.. .
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 589999999999999998764 456688999999999 56775 4789999999999999999988888887764 5
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|.+++|+|+++.|++++.|++|++||++++.++..+.+|..+|++|+|||+|+ .+++|+.|+.+++|.
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~-------~l~Sgs~Dgtv~lwd 425 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP-------MVLAGSADGSLIITN 425 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC-------BCEEEETTTEEECCB
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC-------eEEEEECCCEEEEEe
Confidence 88999999999999999999999999999999888999999999999999998 788999999999986
No 62
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1e-32 Score=270.76 Aligned_cols=240 Identities=19% Similarity=0.236 Sum_probs=202.6
Q ss_pred ccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 212 EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 212 ~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
.+|.+.|.+++|+| ++.+|++++.|+.|++||+.+... ..+. ....+...|.+++|+|++++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~--------------~~~~-~~~~~~~~v~~~~~~~~~~~l~ 179 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVI--------------QVFA-KTDSWDYWYCCVDVSVSRQMLA 179 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEE--------------EEEE-CCCCSSCCEEEEEEETTTTEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCce--------------EEEe-ccCCCCCCeEEEEECCCCCEEE
Confidence 47999999999999 689999999999999999985321 1111 1123457799999999999999
Q ss_pred EEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCC----CceEEEEeeccCCeEEEEe
Q 010754 291 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKT----EEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~----~~~~~~~~~~~~~v~~v~~ 365 (502)
+|+.||.|++||+++.....+..|...|.+++|+|+++ +|++++.|+.|++||+++ +.++..+ .|...+.+++|
T Consensus 180 ~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~ 258 (383)
T 3ei3_B 180 TGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYF 258 (383)
T ss_dssp EEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEE
T ss_pred EECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEE
Confidence 99999999999999889999999999999999999998 999999999999999988 6666666 68999999999
Q ss_pred cC-C-CEEEEEeCCCeEEEEEcCCCcceEEEecCC-----------------CcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 366 RN-N-VSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----------------GEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 366 ~~-~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----------------~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
++ + ..+++++.|+.|++||++++..+..+.+|. ..+..++|+|++++ +|+.||.|+|||
T Consensus 259 s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd 336 (383)
T 3ei3_B 259 NPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYD 336 (383)
T ss_dssp CTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEE
T ss_pred cCCCCCEEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEe
Confidence 87 4 568899999999999999988877777653 34445667777766 778999999999
Q ss_pred CCCCeeEEEecc--CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 427 MKQDKYVHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 427 ~~~~~~~~~~~~--h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+.+++++..+.+ |...+..++|+|+|. .|+++ +|+.+++|...
T Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-------~l~s~-sd~~i~iw~~~ 381 (383)
T 3ei3_B 337 ANSGGLVHQLRDPNAAGIISLNKFSPTGD-------VLASG-MGFNILIWNRE 381 (383)
T ss_dssp TTTCCEEEEECBTTBCSCCCEEEECTTSS-------EEEEE-ETTEEEEEECC
T ss_pred cCCCceeeeecCCCCCceEEEEEEecCcc-------EEEEe-cCCcEEEEecC
Confidence 999999999986 557788889999998 55555 48899999754
No 63
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.2e-32 Score=269.95 Aligned_cols=239 Identities=24% Similarity=0.434 Sum_probs=207.9
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+.+|...|++++|+|+|++||+|+.||+|+|||+.+++.. ....+|...+.+++|+ +.+|+
T Consensus 143 ~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~-----------------~~~~~h~~~v~~~s~~--~~~l~ 203 (420)
T 4gga_A 143 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRL-----------------RNMTSHSARVGSLSWN--SYILS 203 (420)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEEE--TTEEE
T ss_pred ecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEE-----------------EEEeCCCCceEEEeeC--CCEEE
Confidence 4578889999999999999999999999999999887532 1223567788888875 67999
Q ss_pred EEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCc----eEEEEeeccCCeEEEE
Q 010754 291 TGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE----WKQQFEFHSGPTLDVD 364 (502)
Q Consensus 291 s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~~~v~~v~ 364 (502)
+|+.|+.+++||.. ......+.+|...+..+.|+|+++++++++.|+.|++||..+++ .+.....|...|.++.
T Consensus 204 sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~ 283 (420)
T 4gga_A 204 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 283 (420)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEE
T ss_pred EEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeee
Confidence 99999999999976 35567788999999999999999999999999999999998765 3566778899999999
Q ss_pred ecCC--CEEEE--EeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEecc
Q 010754 365 WRNN--VSFAT--SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 365 ~~~~--~~~~~--~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s--~dg~i~iwd~~~~~~~~~~~~ 438 (502)
|.+. ..+++ |+.|++|++||+.++.++..+..| ..+.++.|+|+++.|++++ .||.|+|||+.+++++..+.+
T Consensus 284 ~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~g 362 (420)
T 4gga_A 284 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG 362 (420)
T ss_dssp ECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC
T ss_pred eCCCcccEEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcC
Confidence 9774 34554 357999999999999999888855 5788999999999988776 689999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|.++|++++|+|+|. .|++|+.|+++++|..
T Consensus 363 H~~~V~~l~~spdg~-------~l~S~s~D~tvriWdv 393 (420)
T 4gga_A 363 HTSRVLSLTMSPDGA-------TVASAAADETLRLWRC 393 (420)
T ss_dssp CSSCEEEEEECTTSS-------CEEEEETTTEEEEECC
T ss_pred CCCCEEEEEEcCCCC-------EEEEEecCCeEEEEEC
Confidence 999999999999998 8899999999999975
No 64
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-32 Score=259.16 Aligned_cols=238 Identities=25% Similarity=0.341 Sum_probs=210.0
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
...+.+.+|.+.|++++| |++.+|++|+.||.|++||+.++... .....|...|.+++|+|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~-----------------~~~~~~~~~v~~~~~~~~ 70 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLG-----------------TVVYTGQGFLNSVCYDSE 70 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEE-----------------EEEEECSSCEEEEEEETT
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEE-----------------EEeecCCccEEEEEECCC
Confidence 456889999999999999 99999999999999999999765421 112235678999999999
Q ss_pred CCEEEEEECCCeEEEEECCC----ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 286 GTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
+++|++|+.||.|++|++.. .....+..|...|.++.| ++++|++++.|+.|++|| .+.....+..|...+.
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVW 146 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEE
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCcee
Confidence 99999999999999999753 446678899999999999 468999999999999999 7788888999999999
Q ss_pred EEEecC--CCEEEEEeCCCeEEEEEcCCCcceEEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 362 DVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 362 ~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
++.|.+ +..+++++.|+.|++|| ....+..+.. |...|.+++|+|++. |++++.||.|++||+++++++..+.+
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 999965 67899999999999999 5567777777 899999999999998 99999999999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|..+|++++|+|+|. +++++.++.+++|+.
T Consensus 224 ~~~~i~~~~~~~~~~--------l~~~~~dg~v~iwd~ 253 (313)
T 3odt_A 224 HESFVYCIKLLPNGD--------IVSCGEDRTVRIWSK 253 (313)
T ss_dssp CSSCEEEEEECTTSC--------EEEEETTSEEEEECT
T ss_pred CCceEEEEEEecCCC--------EEEEecCCEEEEEEC
Confidence 999999999999974 788888999999963
No 65
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.3e-32 Score=274.43 Aligned_cols=257 Identities=18% Similarity=0.333 Sum_probs=212.9
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
...+.+|.+.|++++|+|+ +.+||+|+.||.|++|++.+............ .......|...|++++|+|++
T Consensus 121 ~~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~-------~~~~~~~h~~~v~~l~~~~~~ 193 (430)
T 2xyi_A 121 IEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQ-------PDLRLRGHQKEGYGLSWNPNL 193 (430)
T ss_dssp EEEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCC-------CSEEEECCSSCCCCEEECTTS
T ss_pred EEEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCC-------CcEEecCCCCCeEEEEeCCCC
Confidence 3456789999999999997 78999999999999999976321110000000 111223567789999999999
Q ss_pred C-EEEEEECCCeEEEEECCCc--------eEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCC---ceEEEE
Q 010754 287 T-LLATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTE---EWKQQF 353 (502)
Q Consensus 287 ~-~l~s~~~dg~i~iwd~~~~--------~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~---~~~~~~ 353 (502)
. +|++|+.||.|++|++... ....+..|...|.+++|+| ++.+|++++.||.|++||++++ ..+..+
T Consensus 194 ~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~ 273 (430)
T 2xyi_A 194 NGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV 273 (430)
T ss_dssp TTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE
T ss_pred CCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe
Confidence 8 9999999999999998751 1356778999999999999 6789999999999999999987 577788
Q ss_pred eeccCCeEEEEecCCC--EEEEEeCCCeEEEEEcCC-CcceEEEecCCCcEEEEEEcCCCC-EEEEEeCCCcEEEEECCC
Q 010754 354 EFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 354 ~~~~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~~~i~~l~~sp~g~-~las~s~dg~i~iwd~~~ 429 (502)
..|...+.+++|++++ .+++++.||.|++||+++ ..++..+.+|...|++++|+|++. +|++++.||.|+|||+..
T Consensus 274 ~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 274 DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 8899999999998865 588999999999999998 567899999999999999999985 799999999999999987
Q ss_pred --------------CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 430 --------------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 430 --------------~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
..++..+.+|...|++++|+|++. ..+++++.|+.+++|...
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~------~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEP------WIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSST------TEEEEEETTSEEEEEEEC
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCC------CEEEEEECCCCEEEeEcc
Confidence 367778889999999999999986 245667778889999753
No 66
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.6e-33 Score=272.89 Aligned_cols=252 Identities=18% Similarity=0.300 Sum_probs=207.8
Q ss_pred ceEEeccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+.+|.+.|++++|+| ++.+|++|+.||+|+||++.++....... .......+|...|++++|+|+
T Consensus 73 ~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~----------~~~~~~~~h~~~v~~~~~~p~ 142 (402)
T 2aq5_A 73 NVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLR----------EPVITLEGHTKRVGIVAWHPT 142 (402)
T ss_dssp TCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBC----------SCSEEEECCSSCEEEEEECSS
T ss_pred CCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccC----------CceEEecCCCCeEEEEEECcC
Confidence 4566889999999999999 89999999999999999998874322110 011223456788999999999
Q ss_pred C-CEEEEEECCCeEEEEECCC-ceEEEe--cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCC-
Q 010754 286 G-TLLATGSYDGQARIWSTNG-DLKCTL--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGP- 359 (502)
Q Consensus 286 g-~~l~s~~~dg~i~iwd~~~-~~~~~~--~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~- 359 (502)
+ ++|++|+.||.|++||+.. .....+ ..|...|.+++|+|++++|++++.||.|++||+++++.+..+ ..|.+.
T Consensus 143 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 222 (402)
T 2aq5_A 143 AQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTR 222 (402)
T ss_dssp BTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSS
T ss_pred CCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCc
Confidence 8 6999999999999999874 556677 789999999999999999999999999999999999999888 677765
Q ss_pred eEEEEecCCCEEEEE----eCCCeEEEEEcCCCcc-eEEEe-cCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCee
Q 010754 360 TLDVDWRNNVSFATS----STDNMIYVCKIGENRP-IKTFA-GHQGEVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 360 v~~v~~~~~~~~~~~----~~d~~i~i~d~~~~~~-~~~~~-~h~~~i~~l~~sp~g~~las-~s~dg~i~iwd~~~~~~ 432 (502)
+..+.|++++.+++. +.|+.|++||+++... +.... .|...|.+++|+|++++|++ |+.||.|++||+.+++.
T Consensus 223 ~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 223 PVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp CCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 899999888775554 4899999999998764 44443 47788999999999999965 55799999999998874
Q ss_pred -EEEecc--CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 433 -VHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 433 -~~~~~~--h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+..+.. |..+|.+++|+|++. ++++.++.+++|.+.
T Consensus 303 ~~~~l~~~~~~~~v~~~~~sp~~~---------~~~s~~~~~~~~~l~ 341 (402)
T 2aq5_A 303 FLHYLSMFSSKESQRGMGYMPKRG---------LEVNKCEIARFYKLH 341 (402)
T ss_dssp CEEEEEEECCSSCCSEEEECCGGG---------SCGGGTEEEEEEEEE
T ss_pred ceEeecccccCCcccceEEecccc---------cceecceeEEEEEcC
Confidence 444443 568999999999998 566788889999754
No 67
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-33 Score=277.01 Aligned_cols=253 Identities=18% Similarity=0.235 Sum_probs=206.0
Q ss_pred eeeCCCceEEe-ccCCCceEEEEEcC-CCCeEEEEeCCCcEEEEecCC---CCccCCCCCCCceeEEEeeecCccccCCC
Q 010754 201 FEIPNSDVTIL-EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIAD---GTSNGGAQNGPLNVLVLKHVKGRTNEKSK 275 (502)
Q Consensus 201 ~~~~~~~~~~l-~~H~~~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (502)
+......+..+ .+|.+.|++++|+| ++.+|++|+.||+|+|||+.+ +.... ......|..
T Consensus 48 w~~~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~---------------~~~~~~h~~ 112 (437)
T 3gre_A 48 GNLRGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS---------------SSLTYDCSS 112 (437)
T ss_dssp GGCCCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS---------------CSEEEECSS
T ss_pred ccccceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc---------------eeeeccCCC
Confidence 34445667788 89999999999999 999999999999999999876 22100 001113678
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECC----CceEEEecC------------ccCCeEEEE--EecCCCEEEEEecCC
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTN----GDLKCTLSK------------HKGPIFSLK--WNKKGDYLLTGSCDK 337 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~----~~~~~~~~~------------~~~~v~~l~--~~~~~~~l~s~~~d~ 337 (502)
.|++++|+|++++|++|+.||.|++||+. +.....+.. +...+.++. +++++.+|++++.|+
T Consensus 113 ~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~ 192 (437)
T 3gre_A 113 TVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLS 192 (437)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTS
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCC
Confidence 89999999999999999999999999973 333332221 445666666 557899999999999
Q ss_pred eEEEEEcCCCceEEEEee--ccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcC----C
Q 010754 338 TAIVWDVKTEEWKQQFEF--HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP----T 409 (502)
Q Consensus 338 ~i~~wd~~~~~~~~~~~~--~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp----~ 409 (502)
.|++||+++++.+..+.. |...|.+++|++++ .+++++.||.|++||+++++++..+. .|...|++++|+| +
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~ 272 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKN 272 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCC
Confidence 999999999999999988 88999999998764 58899999999999999999999886 7888999996665 6
Q ss_pred CCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc--------------------------EEEEEEccCCCCCCCCCccEE
Q 010754 410 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE--------------------------IYTIRWSPTGSGTNNPNQQLI 463 (502)
Q Consensus 410 g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~--------------------------i~~v~~sp~g~~~~~~~~~l~ 463 (502)
+.+|++|+.||.|+|||+++++++..+.+|... |++++|+ ++. .++
T Consensus 273 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~-------~l~ 344 (437)
T 3gre_A 273 SVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK-------ILL 344 (437)
T ss_dssp EEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-------EEE
T ss_pred ccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-------EEE
Confidence 789999999999999999999998888765544 5555555 333 788
Q ss_pred EEeecCceEEEEe
Q 010754 464 LARLIPYFLYWIC 476 (502)
Q Consensus 464 las~~~~~~iw~~ 476 (502)
+++.|+.+++|+.
T Consensus 345 s~~~d~~i~~wd~ 357 (437)
T 3gre_A 345 TDEATSSIVMFSL 357 (437)
T ss_dssp EEGGGTEEEEEET
T ss_pred ecCCCCeEEEEEC
Confidence 8888999999974
No 68
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.4e-32 Score=263.73 Aligned_cols=241 Identities=14% Similarity=0.270 Sum_probs=204.6
Q ss_pred ccCCCceEEEEEcCC---CCeEEEEeCCCcEEEEecCCCC-ccCCCCCCCceeEEEeeecCccccCCCCeEEEE------
Q 010754 212 EGHTSEVCACAWSPA---GSLLASGSGDSTARIWTIADGT-SNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD------ 281 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~---~~~l~sgs~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~------ 281 (502)
.+|...|.+++|+|+ +.+|++|+.||.|++|++.++. .. .....|...|.+++
T Consensus 62 ~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------------~~~~~~~~~v~~~~~~~~~~ 124 (357)
T 3i2n_A 62 IEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPV-----------------YSVKGHKEIINAIDGIGGLG 124 (357)
T ss_dssp EEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCS-----------------EEECCCSSCEEEEEEESGGG
T ss_pred ecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccE-----------------EEEEecccceEEEeeccccc
Confidence 489999999999998 6999999999999999998765 21 11235677899995
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCc--eEEEecCccC----CeEEEE----EecCCCEEEEEecCCeEEEEEcCCCceEE
Q 010754 282 WNGEGTLLATGSYDGQARIWSTNGD--LKCTLSKHKG----PIFSLK----WNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~~~--~~~~~~~~~~----~v~~l~----~~~~~~~l~s~~~d~~i~~wd~~~~~~~~ 351 (502)
|+|++++|++|+.||.|++||+... ....+..|.+ .|.+++ |+|++++|++++.||.|++||+++++...
T Consensus 125 ~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~ 204 (357)
T 3i2n_A 125 IGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRW 204 (357)
T ss_dssp CC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEE
T ss_pred cCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceee
Confidence 5789999999999999999998753 4666665554 899998 78899999999999999999999988754
Q ss_pred EEeeccCCeEEEEecC----CCEEEEEeCCCeEEEEEcCCCcceEEEe-----cCCCcEEEEEEcCCCC-EEEEEeCCCc
Q 010754 352 QFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRPIKTFA-----GHQGEVNCVKWDPTGS-LLASCSDDVT 421 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~----~~~~~~~~~d~~i~i~d~~~~~~~~~~~-----~h~~~i~~l~~sp~g~-~las~s~dg~ 421 (502)
...+...+.+++|++ +..+++++.|+.|++||+++++++..+. +|...|++++|+|+++ +|++|+.||.
T Consensus 205 -~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 205 -ETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp -EEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred -ecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 456888999999986 5779999999999999999887766655 8999999999999998 8999999999
Q ss_pred EEEEECCCC-------------------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEE-EEeecCceEEEEee
Q 010754 422 AKIWNMKQD-------------------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI-LARLIPYFLYWICS 477 (502)
Q Consensus 422 i~iwd~~~~-------------------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~-las~~~~~~iw~~~ 477 (502)
|++||++++ +++..+.+|..+|++++|+|+|. .++ +++.|+.+++|...
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-------~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKR-------GLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSST-------TEEEEEETTSEEEEEEEC
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCC-------eEEEEecCCCcEEEEECC
Confidence 999998753 46778889999999999999998 666 67889999999754
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=2.6e-31 Score=255.79 Aligned_cols=262 Identities=21% Similarity=0.355 Sum_probs=219.5
Q ss_pred cccccCCCCceeeeCC---------CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCcee
Q 010754 190 MDIATTSASESFEIPN---------SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNV 260 (502)
Q Consensus 190 ~~~~~~~~~~~~~~~~---------~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~ 260 (502)
..+++.+.+..+.++. ...+.+++|...|.+++|+|++++|++|+.|+.|++|+.......
T Consensus 52 ~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~---------- 121 (340)
T 4aow_A 52 DMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTT---------- 121 (340)
T ss_dssp TEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE----------
T ss_pred CEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeeccccee----------
Confidence 3455666666555532 235788999999999999999999999999999999998875421
Q ss_pred EEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCceE--EEecCccCCeEEEEEecCC--CEEEEEecC
Q 010754 261 LVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK--CTLSKHKGPIFSLKWNKKG--DYLLTGSCD 336 (502)
Q Consensus 261 ~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~~~--~~l~s~~~d 336 (502)
.....+...+..+.+++++.+|++|+.|+.+++||...... .....|...+..++|++++ .++++++.|
T Consensus 122 -------~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d 194 (340)
T 4aow_A 122 -------RRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWD 194 (340)
T ss_dssp -------EEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETT
T ss_pred -------eeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCC
Confidence 11122346788999999999999999999999999875443 3456789999999998865 578899999
Q ss_pred CeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 337 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 337 ~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
+.|++||+++++.+..+..|...|.+++|+++ ..|++++.|+.|++||+++.+++..+..+ ..|.++.|+|++.++ +
T Consensus 195 ~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~~~~~~~~-~ 272 (340)
T 4aow_A 195 KLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALCFSPNRYWL-C 272 (340)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEEECSSSSEE-E
T ss_pred CEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeeecCCCCcee-e
Confidence 99999999999999999999999999999875 46889999999999999999999888854 689999999988665 5
Q ss_pred EeCCCcEEEEECCCCeeEEEec---------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 416 CSDDVTAKIWNMKQDKYVHDLR---------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 416 ~s~dg~i~iwd~~~~~~~~~~~---------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++.|+.|+|||++++.++..+. +|...|++++|+|+|. .|++++.|+.+++|...
T Consensus 273 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~-------~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 273 AATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQ-------TLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp EEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSS-------EEEEEETTSCEEEEEEE
T ss_pred ccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCC-------EEEEEeCCCEEEEEeCC
Confidence 5668999999999988776653 6888999999999998 78888999999999865
No 70
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.5e-32 Score=275.16 Aligned_cols=250 Identities=15% Similarity=0.283 Sum_probs=200.7
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCC------------CCeEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS------------KDVTTL 280 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~v~~l 280 (502)
.|.+.|++++|+|+|++||+|+.||.|+||++.++........... .... ...+|. ..|+++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~--~~~~----~~~~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEY--NVYS----TFQSHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCE--EEEE----EEECCCCEEEGGGTEEECCCCCEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccce--eEec----ccccccccccccccccccCceEEE
Confidence 3578999999999999999999999999999987653211111111 1111 122344 779999
Q ss_pred EECCCC--CEEEEEECCCeEEEEECCCceE-----------------------------------------EEecCccCC
Q 010754 281 DWNGEG--TLLATGSYDGQARIWSTNGDLK-----------------------------------------CTLSKHKGP 317 (502)
Q Consensus 281 ~~s~~g--~~l~s~~~dg~i~iwd~~~~~~-----------------------------------------~~~~~~~~~ 317 (502)
+|+|++ .+|++++.||.|++|++..... ....+|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 999998 7999999999999999764222 113679999
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEE-------EeeccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCC
Q 010754 318 IFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQ-------FEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGE 387 (502)
Q Consensus 318 v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~-------~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~ 387 (502)
|.+++|+|++++|++| .|+.|++||+++ +..+.. +..|...|.+++|+|+ ..+++++.|+.|++||+++
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~ 258 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRA 258 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTT
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcC
Confidence 9999999999999998 799999999984 444442 3468889999999886 5799999999999999999
Q ss_pred Ccc----eEEEecCCC------------cEEEEEEcCCCCEEEEEeCCCcEEEEECCC-CeeEEEeccCCCc--------
Q 010754 388 NRP----IKTFAGHQG------------EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVHDLREHSKE-------- 442 (502)
Q Consensus 388 ~~~----~~~~~~h~~------------~i~~l~~sp~g~~las~s~dg~i~iwd~~~-~~~~~~~~~h~~~-------- 442 (502)
+.. +..+.+|.. .|++++|+|+|++|++++. |.|+|||+++ ++++..+.+|...
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~ 337 (447)
T 3dw8_B 259 SALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLY 337 (447)
T ss_dssp CSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHH
T ss_pred CccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccc
Confidence 887 788988876 8999999999999999999 9999999997 8888888888642
Q ss_pred -------EEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 443 -------IYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 443 -------i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+..++|+|+|. .+++++.|+.+++|+..
T Consensus 338 ~~~~i~~~~~~~~s~~~~-------~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 338 ENDCIFDKFECCWNGSDS-------VVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp HTSGGGCCCCEEECTTSS-------EEEEECSTTEEEEEETT
T ss_pred cccccccceEEEECCCCC-------EEEEeccCCEEEEEEcC
Confidence 33499999998 78888889999999753
No 71
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6.1e-32 Score=268.46 Aligned_cols=241 Identities=14% Similarity=0.190 Sum_probs=200.6
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+.+| ..+....|+|++++|++|+.||.|++||+.++... .....|...|++++|+|++++|+
T Consensus 94 ~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-----------------~~~~~h~~~v~~~~~~~~~~~l~ 155 (420)
T 3vl1_A 94 LKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQR-----------------EIDQAHVSEITKLKFFPSGEALI 155 (420)
T ss_dssp SCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEE-----------------EETTSSSSCEEEEEECTTSSEEE
T ss_pred EecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCccee-----------------eecccccCccEEEEECCCCCEEE
Confidence 3445 44556688999999999999999999998865421 12245778999999999999999
Q ss_pred EEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec---cCCeEEE---
Q 010754 291 TGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH---SGPTLDV--- 363 (502)
Q Consensus 291 s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~---~~~v~~v--- 363 (502)
+|+.||.|++||+. +.....+.+|...|.+++|+|++++|++++.|++|++||+++++.+..+..+ ...+.++
T Consensus 156 s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 235 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALF 235 (420)
T ss_dssp EEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEE
T ss_pred EEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEe
Confidence 99999999999986 5667788899999999999999999999999999999999999999888753 3344444
Q ss_pred ------------------EecCCC-EEEEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCCCC-EEEEEeCCCcE
Q 010754 364 ------------------DWRNNV-SFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGS-LLASCSDDVTA 422 (502)
Q Consensus 364 ------------------~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~g~-~las~s~dg~i 422 (502)
+|++++ .+++++.||.|++||+++++.+..+. +|...|++++|+|++. +|++|+.||.|
T Consensus 236 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i 315 (420)
T 3vl1_A 236 VGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGML 315 (420)
T ss_dssp ECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEE
T ss_pred cCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeE
Confidence 445554 58899999999999999998777765 4788999999999999 99999999999
Q ss_pred EEEECCCCee-EEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 423 KIWNMKQDKY-VHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 423 ~iwd~~~~~~-~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++||+++++. +..+.. |..+|.++.| |++. .+++++.|+.+++|...
T Consensus 316 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~-------~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 316 AQWDLRSPECPVGEFLINEGTPINNVYF-AAGA-------LFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEEETTCTTSCSEEEEESTTSCEEEEEE-ETTE-------EEEEETTTEEEEEEEEC
T ss_pred EEEEcCCCcCchhhhhccCCCCceEEEe-CCCC-------EEEEecCCccEEEEecc
Confidence 9999998754 667776 6778888855 4655 67788888999999754
No 72
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=8.3e-33 Score=270.71 Aligned_cols=251 Identities=14% Similarity=0.179 Sum_probs=196.9
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
..+..+.+|.+.|.+++|+|++++|++|+.|++|++||+.++.... .......|...|++++|+|+
T Consensus 46 ~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~--------------~~~~~~~~~~~v~~~~~~~~ 111 (377)
T 3dwl_C 46 KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK--------------QTLVLLRLNRAATFVRWSPN 111 (377)
T ss_dssp EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC--------------CEEECCCCSSCEEEEECCTT
T ss_pred EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee--------------eeeEecccCCceEEEEECCC
Confidence 3567788999999999999999999999999999999998765100 11122346788999999999
Q ss_pred CCEEEEEECCCeEEEEECCCce----EEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcC---------------
Q 010754 286 GTLLATGSYDGQARIWSTNGDL----KCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--------------- 345 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~----~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~--------------- 345 (502)
+++|++|+.||.|++||++... ...+.. |...|.+++|+|++++|++++.|+.|++||+.
T Consensus 112 ~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 191 (377)
T 3dwl_C 112 EDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGS 191 (377)
T ss_dssp SSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCS
T ss_pred CCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCcccccccc
Confidence 9999999999999999987543 566777 99999999999999999999999999999985
Q ss_pred ---CCceEEEEeeccCCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcc----eEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 346 ---TEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 346 ---~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~----~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
.++++..+ .|...|.+++|++++ .+++++.|+.|++||+.++.. +..+.+|...|++++|+|++++|++|+
T Consensus 192 ~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~ 270 (377)
T 3dwl_C 192 RLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGY 270 (377)
T ss_dssp CCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEES
T ss_pred ccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEc
Confidence 34455666 789999999998865 588999999999999999987 888999999999999999999999998
Q ss_pred CCCcEEEEECCCCe--e-------------------------E---------EEe----------------ccCCCcEEE
Q 010754 418 DDVTAKIWNMKQDK--Y-------------------------V---------HDL----------------REHSKEIYT 445 (502)
Q Consensus 418 ~dg~i~iwd~~~~~--~-------------------------~---------~~~----------------~~h~~~i~~ 445 (502)
.++.+ +|+..... . . ..+ ..|...|++
T Consensus 271 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~ 349 (377)
T 3dwl_C 271 NYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIAT 349 (377)
T ss_dssp SSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEE
T ss_pred CCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEE
Confidence 77766 66654211 0 0 001 139999999
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+++.+.+.. ....+++++.|+.+++|.
T Consensus 350 ~~~~~~~~~---~~~~~~s~g~Dg~i~iWd 376 (377)
T 3dwl_C 350 LRPYAGTPG---NITAFTSSGTDGRVVLWT 376 (377)
T ss_dssp EEEEEEETT---EEEEEEEEETTSEEEEEC
T ss_pred EeccCCCCC---ceEEEEeecCCCcEEEec
Confidence 998876541 112488899999999996
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=3.3e-32 Score=263.84 Aligned_cols=247 Identities=19% Similarity=0.326 Sum_probs=204.2
Q ss_pred eEEeccCCCceEEEEEcCCCC-eEEEEeC---CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 208 VTILEGHTSEVCACAWSPAGS-LLASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~-~l~sgs~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
...+++|.+.|++++|+|++. ++++|+. |+.|++|++.+++.. .. ....|...|++++|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~-----------~~-----~~~~~~~~v~~~~~~ 74 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK-----------LL-----REIEKAKPIKCGTFG 74 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE-----------EE-----EEEEESSCEEEEECT
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc-----------ce-----eeecccCcEEEEEEc
Confidence 456688999999999999986 5556665 999999999876521 00 111356789999999
Q ss_pred CC---CCEEEEEECCCeEEEEECCC-c-eEEEecCccCCeEEEEE------ecCCCEEEEEecCCeEEEEEcCCCc-eEE
Q 010754 284 GE---GTLLATGSYDGQARIWSTNG-D-LKCTLSKHKGPIFSLKW------NKKGDYLLTGSCDKTAIVWDVKTEE-WKQ 351 (502)
Q Consensus 284 ~~---g~~l~s~~~dg~i~iwd~~~-~-~~~~~~~~~~~v~~l~~------~~~~~~l~s~~~d~~i~~wd~~~~~-~~~ 351 (502)
|+ +++|++|+.||.|++||+.. . ....+..|...|.+++| +|++++|++++.||.|++||++++. .+.
T Consensus 75 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 75 ATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp TCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred CCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 98 79999999999999999874 3 67788899999999955 6789999999999999999999887 677
Q ss_pred EEeeccC----CeEEEE----ecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC---CCCEEEEEeCC
Q 010754 352 QFEFHSG----PTLDVD----WRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP---TGSLLASCSDD 419 (502)
Q Consensus 352 ~~~~~~~----~v~~v~----~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp---~g~~las~s~d 419 (502)
.+..+.+ .+.++. |++ +..+++++.|+.|++||+++++.... ..|...|++++|+| ++.+|++|+.|
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 7766555 788888 444 55688999999999999999887544 56889999999999 99999999999
Q ss_pred CcEEEEECCCCeeEEEec-----cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 420 VTAKIWNMKQDKYVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~-----~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|.|++||+++++++..+. +|...|++++|+|+|. ..+++++.++.+++|...
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~l~~~~~dg~i~iwd~~ 290 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR------ELFLTAGGAGGLHLWKYE 290 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE------EEEEEEETTSEEEEEEEE
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC------cEEEEEeCCCcEEEeecC
Confidence 999999998877655554 8999999999999975 246777888999999865
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.7e-33 Score=275.94 Aligned_cols=257 Identities=18% Similarity=0.273 Sum_probs=212.6
Q ss_pred CceEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
..+..+.+|.+.|.+++|+|+ +.+|++|+.|+.|++||+.+......... .........|...|++++|+|
T Consensus 104 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~ 175 (416)
T 2pm9_A 104 NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYT--------PLTPGQSMSSVDEVISLAWNQ 175 (416)
T ss_dssp CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCC--------CBCCCCSCCSSCCCCEEEECS
T ss_pred cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccc--------ccccccccCCCCCeeEEEeCC
Confidence 367788999999999999998 89999999999999999987652110000 001122345678899999999
Q ss_pred C-CCEEEEEECCCeEEEEECCC-ceEEEecCc------cCCeEEEEEecCC-CEEEEEecCC---eEEEEEcCCC-ceEE
Q 010754 285 E-GTLLATGSYDGQARIWSTNG-DLKCTLSKH------KGPIFSLKWNKKG-DYLLTGSCDK---TAIVWDVKTE-EWKQ 351 (502)
Q Consensus 285 ~-g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~------~~~v~~l~~~~~~-~~l~s~~~d~---~i~~wd~~~~-~~~~ 351 (502)
+ +.+|++++.||.|++||++. .....+..+ ...|.+++|+|++ .+|++++.|+ .|++||++++ ..+.
T Consensus 176 ~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 176 SLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp SCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred CCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 8 78999999999999999874 555566655 7899999999997 6899999998 9999999986 5677
Q ss_pred EEe-eccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEEC
Q 010754 352 QFE-FHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNM 427 (502)
Q Consensus 352 ~~~-~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s~dg~i~iwd~ 427 (502)
.+. .|...+.+++|++ +..+++++.|+.|++||+.+++++..+.+|...|++++|+|++ .+|++++.||.|+|||+
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~ 335 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTL 335 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEES
T ss_pred EeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEc
Confidence 777 8999999999986 4669999999999999999999999999999999999999999 89999999999999999
Q ss_pred CCCeeEEEec-----------------------------------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 428 KQDKYVHDLR-----------------------------------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 428 ~~~~~~~~~~-----------------------------------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
.+........ .|..++.+++|+|+|. .+++++.|+.++
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~la~~~~d~~v~ 408 (416)
T 2pm9_A 336 QNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-------LVQITPDGKGVS 408 (416)
T ss_dssp CCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-------EECBCTTSSCBC
T ss_pred cCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-------EEEEeCCCCeEE
Confidence 8765432221 1667888999999998 555666678899
Q ss_pred EEEee
Q 010754 473 YWICS 477 (502)
Q Consensus 473 iw~~~ 477 (502)
+|...
T Consensus 409 ~w~~~ 413 (416)
T 2pm9_A 409 ITNPK 413 (416)
T ss_dssp CBCCC
T ss_pred EEEec
Confidence 98754
No 75
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4e-31 Score=266.26 Aligned_cols=240 Identities=22% Similarity=0.325 Sum_probs=209.5
Q ss_pred ceEEeccCCCce-EEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEV-CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V-~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
....+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++.. ....+|...|++++|+++
T Consensus 113 ~~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~-----------------~~~~~h~~~V~~l~~~~~ 173 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFL-----------------LQLSGHDGGVWALKYAHG 173 (464)
T ss_dssp EEEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEE-----------------EEECCCSSCEEEEEECST
T ss_pred ceEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEE-----------------EEEeCCCcCEEEEEEcCC
Confidence 356889999886 55555 5789999999999999999876521 122357889999999998
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEe--cCCCEEEEEecCCeEEEEEcCCCce-------------
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWN--KKGDYLLTGSCDKTAIVWDVKTEEW------------- 349 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~--~~~~~l~s~~~d~~i~~wd~~~~~~------------- 349 (502)
+ +|++|+.||.|++||++ +.....+.+|...|.+++|+ +++++|++++.|++|++||++++..
T Consensus 174 ~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~ 252 (464)
T 3v7d_B 174 G-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLV 252 (464)
T ss_dssp T-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEE
T ss_pred C-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceE
Confidence 8 99999999999999987 56677888999999999999 5778999999999999999987653
Q ss_pred ----------EEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 350 ----------KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 350 ----------~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
...+.+|...+.++... +..+++++.|+.|++||+.+++++..+.+|...|.+++|+|++++|++|+.|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~d 331 (464)
T 3v7d_B 253 FHTPEENPYFVGVLRGHMASVRTVSGH-GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMD 331 (464)
T ss_dssp ESCGGGCTTEEEEECCCSSCEEEEEEE-TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred eeccCCCeEEEEEccCccceEEEEcCC-CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCC
Confidence 45567788888888543 5679999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 420 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|.|++||+++++++..+.+|...|.+++|++ . .+++++.|+.+++|+.
T Consensus 332 g~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~--~-------~l~s~s~dg~v~vwd~ 379 (464)
T 3v7d_B 332 TTIRIWDLENGELMYTLQGHTALVGLLRLSD--K-------FLVSAAADGSIRGWDA 379 (464)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEECS--S-------EEEEEETTSEEEEEET
T ss_pred CcEEEEECCCCcEEEEEeCCCCcEEEEEEcC--C-------EEEEEeCCCcEEEEEC
Confidence 9999999999999999999999999999984 3 6888999999999974
No 76
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-32 Score=268.27 Aligned_cols=253 Identities=10% Similarity=0.110 Sum_probs=195.4
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeee----------------cCccccCCCCe
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV----------------KGRTNEKSKDV 277 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~v 277 (502)
-...|.+++|+|||+++||++.|++|+ |....+.+ ..++..+...... ......+...|
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l---~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V 88 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI---NCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYP 88 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC---SSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--ccccccee---cCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcE
Confidence 346677888888888888888888887 54444322 2222222222100 01111346789
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccC-----CeEEEEEecCCCEEEEEecCCeEEEEEcCCCce---
Q 010754 278 TTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKG-----PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW--- 349 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~--- 349 (502)
++++|||+|++||+++.||.|++|+.++ ....+. |.. .|.+++|+|+|++|++|+.||+|++||+.++..
T Consensus 89 ~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~ 166 (588)
T 2j04_A 89 RVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTP 166 (588)
T ss_dssp EEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccc
Confidence 9999999999999999999999999665 555556 665 499999999999999999999999999998863
Q ss_pred ----EEEE----eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc---eEEE-ecCCCcEEEEEEcCCCCEEEEEe
Q 010754 350 ----KQQF----EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP---IKTF-AGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 350 ----~~~~----~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~---~~~~-~~h~~~i~~l~~sp~g~~las~s 417 (502)
+..+ .+|...|.+++|+|++ +++++.|+.|++||+..+.. ..++ .+|...|.+++|+ |++||+++
T Consensus 167 ~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa~ 243 (588)
T 2j04_A 167 EFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLTC 243 (588)
T ss_dssp CCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEEC
T ss_pred cceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEEe
Confidence 5666 4566799999999999 99999999999999988773 3567 4788999999999 68999998
Q ss_pred CCCcEEEEECCCCeeEEEeccCCCcEEEEEE--ccCCCCCCCCCccEEEEeecCceEEEEee-eEEEeeec
Q 010754 418 DDVTAKIWNMKQDKYVHDLREHSKEIYTIRW--SPTGSGTNNPNQQLILARLIPYFLYWICS-IYFKYFGT 485 (502)
Q Consensus 418 ~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~--sp~g~~~~~~~~~l~las~~~~~~iw~~~-~~~~~~g~ 485 (502)
+++|++||+.+++......+|...|++++| +|+|. .+++|..++. ++|..+ +.+.+++.
T Consensus 244 -~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~-------~La~a~edG~-klw~~d~~~~spd~~ 305 (588)
T 2j04_A 244 -PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKEST-------ILLMSNKTSY-KVLLEDELHVTADNI 305 (588)
T ss_dssp -SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCE-------EEEECSSCEE-EEEESSSEEEECCCS
T ss_pred -CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCC-------EEEEEcCCCC-EEEeeccEEECCCce
Confidence 699999999988884444489999999999 99997 5666666777 899753 34555553
No 77
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.9e-31 Score=299.06 Aligned_cols=246 Identities=20% Similarity=0.338 Sum_probs=219.9
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|.+.|++++|+|++++|++|+.||+|++||+.++... ....+|...|++++|+|+|
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~-----------------~~~~~h~~~v~~~~~s~~~ 669 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKL-----------------LDIKAHEDEVLCCAFSSDD 669 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE-----------------EEECCCSSCEEEEEECTTS
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEE-----------------EEeccCCCCEEEEEEecCC
Confidence 34578899999999999999999999999999999999887532 1123567899999999999
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
++|++|+.||.|++||+. +.....+..|...|.+++|+| ++.++++|+.|+.|++||+.+++++..+.+|...|.++
T Consensus 670 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 670 SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEE
Confidence 999999999999999976 567788889999999999999 55689999999999999999999999999999999999
Q ss_pred EecCCC-EEEEEeCCCeEEEEEcCCCcceEEE------------------------------------------------
Q 010754 364 DWRNNV-SFATSSTDNMIYVCKIGENRPIKTF------------------------------------------------ 394 (502)
Q Consensus 364 ~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~------------------------------------------------ 394 (502)
+|++++ .+++++.||.|++||+.++.....+
T Consensus 750 ~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~ 829 (1249)
T 3sfz_A 750 RFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTS 829 (1249)
T ss_dssp EECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTC
T ss_pred EEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCC
Confidence 998754 6899999999999999776443322
Q ss_pred -------ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 395 -------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 395 -------~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
.+|...|.+++|+|+++++++++.||.|++||+.++..+..+.+|...|++++|+|+|. .+++++.
T Consensus 830 ~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-------~l~s~s~ 902 (1249)
T 3sfz_A 830 GLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGS-------SFLTASD 902 (1249)
T ss_dssp CEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-------EEEEEET
T ss_pred CceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCC-------EEEEEeC
Confidence 16778899999999999999999999999999999999999999999999999999998 7888999
Q ss_pred cCceEEEEe
Q 010754 468 IPYFLYWIC 476 (502)
Q Consensus 468 ~~~~~iw~~ 476 (502)
|+.+++|..
T Consensus 903 dg~v~vw~~ 911 (1249)
T 3sfz_A 903 DQTIRVWET 911 (1249)
T ss_dssp TSCEEEEEH
T ss_pred CCeEEEEEc
Confidence 999999974
No 78
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.1e-31 Score=255.93 Aligned_cols=199 Identities=20% Similarity=0.365 Sum_probs=186.0
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--
Q 010754 271 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-- 347 (502)
Q Consensus 271 ~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-- 347 (502)
.+|...|++++|+|++++|++|+.||.|++||.. +.....+..|...|.+++|+|++++|++|+.|+.|++||+.++
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~ 131 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREG 131 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSB
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCC
Confidence 4567889999999999999999999999999965 5667788889999999999999999999999999999999875
Q ss_pred --ceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 348 --EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 348 --~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
.....+.+|...+.++.|.+++.+++++.|+.|++||+.+++++..+.+|.+.|++++|+|++++|++|+.||.|++|
T Consensus 132 ~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~w 211 (340)
T 1got_B 132 NVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLW 211 (340)
T ss_dssp SCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 356677889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+++++++..+.+|...|++++|+|+|. .+++++.|+.+++|+.
T Consensus 212 d~~~~~~~~~~~~h~~~v~~v~~~p~~~-------~l~s~s~d~~v~iwd~ 255 (340)
T 1got_B 212 DVREGMCRQTFTGHESDINAICFFPNGN-------AFATGSDDATCRLFDL 255 (340)
T ss_dssp ETTTCSEEEEECCCSSCEEEEEECTTSS-------EEEEEETTSCEEEEET
T ss_pred ECCCCeeEEEEcCCcCCEEEEEEcCCCC-------EEEEEcCCCcEEEEEC
Confidence 9999999999999999999999999998 7888999999999975
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2.5e-32 Score=265.49 Aligned_cols=248 Identities=19% Similarity=0.297 Sum_probs=208.3
Q ss_pred EEeccCCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 209 TILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
....+|.+.|++++|+|+ ...+++++.++.|++|++.++.... .+... ....+...|++++|+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~----------~~~~~--~~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR----------LLQSY--VDADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE----------EEEEE--ECSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE----------eeeec--cccCCCCcEEEEEecc
Confidence 455699999999999984 4566666677899999998765321 11111 1123567899999999
Q ss_pred C----CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEE---ee
Q 010754 285 E----GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQF---EF 355 (502)
Q Consensus 285 ~----g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~---~~ 355 (502)
+ +++|++|+.||.|++||+. +.....+..|...|.+++|+| ++++|++++.||.|++||+++++.+..+ ..
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 159 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEG 159 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTS
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccccc
Confidence 8 6799999999999999976 566778888999999999999 8999999999999999999999998888 67
Q ss_pred ccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEe----------------------------cCCCcEEEEEE
Q 010754 356 HSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA----------------------------GHQGEVNCVKW 406 (502)
Q Consensus 356 ~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~----------------------------~h~~~i~~l~~ 406 (502)
|...|.+++|+++ ..+++++.|+.|++||+++++.+..+. +|...|.+++|
T Consensus 160 ~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 239 (366)
T 3k26_A 160 HRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRW 239 (366)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEE
T ss_pred ccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEE
Confidence 9999999999875 468899999999999999876544333 39999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCee--------------EEEeccCCCcEEEEEEccC--CCCCCCCCccEEEEeecCc
Q 010754 407 DPTGSLLASCSDDVTAKIWNMKQDKY--------------VHDLREHSKEIYTIRWSPT--GSGTNNPNQQLILARLIPY 470 (502)
Q Consensus 407 sp~g~~las~s~dg~i~iwd~~~~~~--------------~~~~~~h~~~i~~v~~sp~--g~~~~~~~~~l~las~~~~ 470 (502)
+ +++|++++.||.|++||+.++.. +..+..|...|++++|+|+ |. .+++++.++.
T Consensus 240 ~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-------~l~~~~~dg~ 310 (366)
T 3k26_A 240 L--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-------MLALGNQVGK 310 (366)
T ss_dssp E--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-------EEEEECTTSC
T ss_pred c--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-------EEEEEecCCc
Confidence 9 77999999999999999987643 7788899999999999999 77 7778888899
Q ss_pred eEEEEee
Q 010754 471 FLYWICS 477 (502)
Q Consensus 471 ~~iw~~~ 477 (502)
+++|...
T Consensus 311 i~vwd~~ 317 (366)
T 3k26_A 311 LYVWDLE 317 (366)
T ss_dssp EEEEECC
T ss_pred EEEEECC
Confidence 9999864
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.6e-31 Score=265.41 Aligned_cols=248 Identities=18% Similarity=0.261 Sum_probs=202.5
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.+++... ....|...|++++|+|++
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-----------------~~~~h~~~v~~~~~~~~~ 193 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR-----------------TLIGHRATVTDIAIIDRG 193 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE-----------------EEECCSSCEEEEEEETTT
T ss_pred eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce-----------------EEcCCCCcEEEEEEcCCC
Confidence 345668999999999999999999999999999999998765321 123467889999999999
Q ss_pred CEEEEEECCCeEEEEECCC-ceEEEecC---cc---------------------CCeEEEEEecCCCEEEEEecCCeEEE
Q 010754 287 TLLATGSYDGQARIWSTNG-DLKCTLSK---HK---------------------GPIFSLKWNKKGDYLLTGSCDKTAIV 341 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~-~~~~~~~~---~~---------------------~~v~~l~~~~~~~~l~s~~~d~~i~~ 341 (502)
++|++|+.||.|++||+.. .....+.. +. ..+.+++|+|++++|++++.||.|++
T Consensus 194 ~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i 273 (420)
T 3vl1_A 194 RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITV 273 (420)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEE
T ss_pred CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEE
Confidence 9999999999999999874 45555553 33 44455556789999999999999999
Q ss_pred EEcCCCceEEEEee-ccCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCc-ceEEEec-CCCcEEEEEEcCCCCEEEEE
Q 010754 342 WDVKTEEWKQQFEF-HSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENR-PIKTFAG-HQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 342 wd~~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~-~~~~~~~-h~~~i~~l~~sp~g~~las~ 416 (502)
||+++++....+.. |...+.+++|++++ .+++++.||.|++||++++. ++..+.+ |...|+++.+ +++++|+++
T Consensus 274 ~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~ 352 (420)
T 3vl1_A 274 HNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALFVSS 352 (420)
T ss_dssp EETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEEEEE
T ss_pred EECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEEEEe
Confidence 99999988777754 77899999998865 69999999999999999875 4777877 5677888855 578899999
Q ss_pred eCCCcEEEEECCCC---------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 417 SDDVTAKIWNMKQD---------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 417 s~dg~i~iwd~~~~---------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.||.|++|++... .....+..|...|.+++|+|+|+ .+..++.++.++.+.+|..
T Consensus 353 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~----~~g~l~a~g~~g~~~~~~~ 417 (420)
T 3vl1_A 353 GFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDE----SNGEVLEVGKNNFCALYNL 417 (420)
T ss_dssp TTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSS----SSCEEEEEETTTEEEEEES
T ss_pred cCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCC----CcceEEEEcCCceEEEEec
Confidence 99999999998763 22234557888999999999986 2335777777888888864
No 81
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.3e-31 Score=251.69 Aligned_cols=227 Identities=21% Similarity=0.357 Sum_probs=184.8
Q ss_pred CCCcccccCCCCceeeeC------CCceEEeccCCCceEEEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCc
Q 010754 187 PEPMDIATTSASESFEIP------NSDVTILEGHTSEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPL 258 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~------~~~~~~l~~H~~~V~~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~ 258 (502)
|....+++.+.+..+.+. ...+..|.+|.+.|++++|+|+ +++|++|+.|++|+|||+.++....
T Consensus 19 ~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~------- 91 (297)
T 2pm7_B 19 YYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ------- 91 (297)
T ss_dssp TTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC-------
T ss_pred CCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE-------
Confidence 333345555555555443 1356889999999999999874 8999999999999999998753210
Q ss_pred eeEEEeeecCccccCCCCeEEEEECCC--CCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecC-------
Q 010754 259 NVLVLKHVKGRTNEKSKDVTTLDWNGE--GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK------- 326 (502)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~v~~l~~s~~--g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~------- 326 (502)
......|...|.+++|+|+ |.+|++|+.||.|++||++.. ....+..|...|.+++|+|+
T Consensus 92 --------~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~ 163 (297)
T 2pm7_B 92 --------IAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGE 163 (297)
T ss_dssp --------CEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC------
T ss_pred --------EEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCCccccccc
Confidence 0112346778999999997 899999999999999998643 24567789999999999997
Q ss_pred ------CCEEEEEecCCeEEEEEcCCCc----eEEEEeeccCCeEEEEecCC----CEEEEEeCCCeEEEEEcCCCcc--
Q 010754 327 ------GDYLLTGSCDKTAIVWDVKTEE----WKQQFEFHSGPTLDVDWRNN----VSFATSSTDNMIYVCKIGENRP-- 390 (502)
Q Consensus 327 ------~~~l~s~~~d~~i~~wd~~~~~----~~~~~~~~~~~v~~v~~~~~----~~~~~~~~d~~i~i~d~~~~~~-- 390 (502)
+++|++|+.|++|++||++++. ....+.+|...|.+++|+|+ ..|++++.|++|++||+.....
T Consensus 164 ~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~ 243 (297)
T 2pm7_B 164 HNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPW 243 (297)
T ss_dssp ------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCC
T ss_pred CCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCcc
Confidence 5799999999999999998876 56678889999999999986 5699999999999999987531
Q ss_pred -eEEE--ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 391 -IKTF--AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 391 -~~~~--~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
...+ .+|...|.+++|+|+|++||+++.||.|+||+..
T Consensus 244 ~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 244 KKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred ceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 2233 4678899999999999999999999999999976
No 82
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.2e-31 Score=255.71 Aligned_cols=203 Identities=22% Similarity=0.387 Sum_probs=179.8
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-- 284 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-- 284 (502)
....+.+|.+.|.+++|+|++..|++|+.|++|++||+.+++.. ....+|...|.+++|+|
T Consensus 146 ~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~-----------------~~~~~h~~~v~~~~~~~~~ 208 (354)
T 2pbi_B 146 KKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL-----------------QSFHGHGADVLCLDLAPSE 208 (354)
T ss_dssp GCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-----------------EEEECCSSCEEEEEECCCS
T ss_pred cceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE-----------------EEEcCCCCCeEEEEEEeCC
Confidence 45677899999999999999999999999999999999887532 11235677899999987
Q ss_pred CCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc--CCeE
Q 010754 285 EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS--GPTL 361 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~--~~v~ 361 (502)
+|++|++|+.||.|++||++ +.....+..|...|.+++|+|++++|++|+.|++|++||++++..+..+..+. ..+.
T Consensus 209 ~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~ 288 (354)
T 2pbi_B 209 TGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAIYSKESIIFGAS 288 (354)
T ss_dssp SCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEE
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCccccee
Confidence 57899999999999999976 56677888999999999999999999999999999999999988777665433 4688
Q ss_pred EEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 362 DVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 362 ~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
+++|++++ .+++++.|+.|++||+.++..+..+.+|.+.|++++|+|+|++|++|+.||+|+||+
T Consensus 289 ~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 289 SVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred EEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 99998754 578899999999999999999999999999999999999999999999999999996
No 83
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.1e-32 Score=269.21 Aligned_cols=252 Identities=11% Similarity=0.120 Sum_probs=204.2
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecC---CCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE--ECCCCC
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIA---DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD--WNGEGT 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~--~s~~g~ 287 (502)
+|.+.|.+++|+|++.+|++|+.||+|++||+. +++....... .....+......+...+.++. +++++.
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC-----ECIRKINLKNFGKNEYAVRMRAFVNEEKS 183 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE-----EEEEEEEGGGGSSCCCEEEEEEEECSSCE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc-----ceeEEEEccCcccccCceEEEEEEcCCCC
Confidence 699999999999999999999999999999995 3332111000 011111111111566788888 678999
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecC--ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe-eccCCeEEE
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE-FHSGPTLDV 363 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~-~~~~~v~~v 363 (502)
+|++|+.||.|++||+. +.....+.. |...|.+++|+|++++|++|+.||.|++||+++++++..+. .|..+|.++
T Consensus 184 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 184 LLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred EEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEE
Confidence 99999999999999986 456667776 89999999999999999999999999999999999998886 677789999
Q ss_pred EecC----CC-EEEEEeCCCeEEEEEcCCCcceEEEecC--------------------------CCcEEEEEEcCCCCE
Q 010754 364 DWRN----NV-SFATSSTDNMIYVCKIGENRPIKTFAGH--------------------------QGEVNCVKWDPTGSL 412 (502)
Q Consensus 364 ~~~~----~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h--------------------------~~~i~~l~~sp~g~~ 412 (502)
.|.+ ++ .+++++.|+.|++||+.+++.+..+.+| ...|++++|+ ++++
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~ 342 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKI 342 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEE
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceE
Confidence 6654 34 6888999999999999999988877754 4458888999 7789
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEecc-------------------------------------CCCcEEEEEEccCCCCC
Q 010754 413 LASCSDDVTAKIWNMKQDKYVHDLRE-------------------------------------HSKEIYTIRWSPTGSGT 455 (502)
Q Consensus 413 las~s~dg~i~iwd~~~~~~~~~~~~-------------------------------------h~~~i~~v~~sp~g~~~ 455 (502)
|++|+.||.|++||+.+++++..+.+ |...|++++|++++.
T Consensus 343 l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~-- 420 (437)
T 3gre_A 343 LLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE-- 420 (437)
T ss_dssp EEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS--
T ss_pred EEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC--
Confidence 99999999999999999887776665 888999999999822
Q ss_pred CCCCccEEEEeecCceEEEE
Q 010754 456 NNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 456 ~~~~~~l~las~~~~~~iw~ 475 (502)
...+++|+.|+.+++|.
T Consensus 421 ---~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 ---TPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---SEEEEEEETTSCEEEEC
T ss_pred ---ceEEEEEcCCceEEEeC
Confidence 23778888889999993
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.1e-31 Score=265.55 Aligned_cols=257 Identities=15% Similarity=0.265 Sum_probs=198.0
Q ss_pred eEEeccCC------------CceEEEEEcCCC--CeEEEEeCCCcEEEEecCCCCccCC---C-----------CCCCce
Q 010754 208 VTILEGHT------------SEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGG---A-----------QNGPLN 259 (502)
Q Consensus 208 ~~~l~~H~------------~~V~~~~~~p~~--~~l~sgs~dg~v~iw~~~~~~~~~~---~-----------~~~~~~ 259 (502)
...+.+|. +.|.+++|+|++ .+|++++.|++|++|++.++..... . ......
T Consensus 74 ~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 153 (447)
T 3dw8_B 74 YSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLR 153 (447)
T ss_dssp EEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCC
T ss_pred ecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceE
Confidence 67889998 889999999998 7999999999999999876432100 0 000000
Q ss_pred eEE---------EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-Cce-EE-------EecCccCCeEEE
Q 010754 260 VLV---------LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDL-KC-------TLSKHKGPIFSL 321 (502)
Q Consensus 260 ~~~---------~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~-~~-------~~~~~~~~v~~l 321 (502)
... .........+|...|++++|+|++++|++| .||.|++||+. +.. .. .+..|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 232 (447)
T 3dw8_B 154 VPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAA 232 (447)
T ss_dssp CCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEE
T ss_pred eccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEE
Confidence 000 000111234688899999999999999998 79999999988 332 22 255899999999
Q ss_pred EEecCC-CEEEEEecCCeEEEEEcCCCce----EEEEeeccC------------CeEEEEecCCCE-EEEEeCCCeEEEE
Q 010754 322 KWNKKG-DYLLTGSCDKTAIVWDVKTEEW----KQQFEFHSG------------PTLDVDWRNNVS-FATSSTDNMIYVC 383 (502)
Q Consensus 322 ~~~~~~-~~l~s~~~d~~i~~wd~~~~~~----~~~~~~~~~------------~v~~v~~~~~~~-~~~~~~d~~i~i~ 383 (502)
+|+|++ ++|++|+.||.|++||+++++. ...+..|.. .|.+++|++++. +++++. +.|++|
T Consensus 233 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iw 311 (447)
T 3dw8_B 233 EFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVW 311 (447)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEE
T ss_pred EECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEE
Confidence 999998 9999999999999999999887 788888776 899999988765 666666 999999
Q ss_pred EcCC-CcceEEEecCCCc---------------EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec----------
Q 010754 384 KIGE-NRPIKTFAGHQGE---------------VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR---------- 437 (502)
Q Consensus 384 d~~~-~~~~~~~~~h~~~---------------i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~---------- 437 (502)
|++. ++++..+.+|... +..++|+|++++|++|+.||.|+|||+.+++.+. +.
T Consensus 312 d~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~-~~~~~~~~~~~~ 390 (447)
T 3dw8_B 312 DLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDIT-LEASRENNKPRT 390 (447)
T ss_dssp ETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEE-EECCSTTCCTTC
T ss_pred eCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCccee-eeeccccccccc
Confidence 9997 8889999988642 3349999999999999999999999999988753 22
Q ss_pred -----------------------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 438 -----------------------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 438 -----------------------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+...|..++|+|+|. .|.++ +.+.+.+|.
T Consensus 391 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~-------~la~~-~~~~~~~~~ 443 (447)
T 3dw8_B 391 VLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKEN-------IIAVA-TTNNLYIFQ 443 (447)
T ss_dssp BCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSS-------EEEEE-CSSCEEEEE
T ss_pred ccCCccccccCCcccccccccccccCCceeEEEECCCCC-------EEEEE-ecceeeeec
Confidence 2345789999999998 33333 344566664
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=7.5e-31 Score=282.90 Aligned_cols=266 Identities=21% Similarity=0.251 Sum_probs=226.9
Q ss_pred CCCcccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 187 PEPMDIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
|....++....+..+.+. ...+..+.+|.+.|.+++|+|++++|++|+.||.|++|++.+++...
T Consensus 23 p~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~----------- 91 (814)
T 3mkq_A 23 PTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV----------- 91 (814)
T ss_dssp SSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-----------
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-----------
Confidence 333344444444444332 23567888999999999999999999999999999999998865321
Q ss_pred EeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEec-CCCEEEEEecCCeE
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTA 339 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i 339 (502)
....|...|++++|+|++++|++|+.||.|++|++.. .....+..|...|.+++|+| +++.|++++.||+|
T Consensus 92 ------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v 165 (814)
T 3mkq_A 92 ------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTV 165 (814)
T ss_dssp ------EEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE
T ss_pred ------EEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeE
Confidence 1234677899999999999999999999999999764 45677888999999999999 88999999999999
Q ss_pred EEEEcCCCceEEEEeecc-CCeEEEEecC---CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 340 IVWDVKTEEWKQQFEFHS-GPTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 340 ~~wd~~~~~~~~~~~~~~-~~v~~v~~~~---~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
++||+.++.....+..+. ..+..++|++ +..+++++.||.|++||+.+++.+..+.+|...|++++|+|++++|++
T Consensus 166 ~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 245 (814)
T 3mkq_A 166 KVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIIS 245 (814)
T ss_dssp EEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEE
T ss_pred EEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 999999888877777655 7899999976 457899999999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 416 CSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 416 ~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|+.||.|++||+.+++.+..+..|...|++++|+|+|. ..++.++.++.+.+|.
T Consensus 246 ~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~------~~~~~~~~~~~~~~~~ 299 (814)
T 3mkq_A 246 GSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR------KNYIASGFDNGFTVLS 299 (814)
T ss_dssp EETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG------GGEEEEEETTEEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC------ceEEEEEeCCCEEEEE
Confidence 99999999999999999999999999999999999986 2246666777777775
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=7.2e-31 Score=262.26 Aligned_cols=238 Identities=23% Similarity=0.419 Sum_probs=208.4
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
..+..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.. .....|...|.+++|++
T Consensus 164 ~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~l~~~~- 223 (435)
T 1p22_A 164 ECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEML-----------------NTLIHHCEAVLHLRFNN- 223 (435)
T ss_dssp CEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEE-----------------EEECCCCSCEEEEECCT-
T ss_pred eEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEE-----------------EEEcCCCCcEEEEEEcC-
Confidence 456788999999999999 7889999999999999999887532 11234677899999974
Q ss_pred CCEEEEEECCCeEEEEECCCc----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 286 GTLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
.++++|+.||.|++||+... ....+.+|...|.+++| ++++|++|+.||.|++||+++++.+..+..|...+.
T Consensus 224 -~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 300 (435)
T 1p22_A 224 -GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIA 300 (435)
T ss_dssp -TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEE
T ss_pred -CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEE
Confidence 59999999999999998642 22677889999999999 678999999999999999999999999999999999
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe---------e
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK---------Y 432 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~---------~ 432 (502)
++.|. +..+++++.||.|++||+++++++..+.+|...|.+++| ++.+|++|+.||.|++||+.++. +
T Consensus 301 ~~~~~-~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 377 (435)
T 1p22_A 301 CLQYR-DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLC 377 (435)
T ss_dssp EEEEE-TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTE
T ss_pred EEEeC-CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCCCccccccchh
Confidence 99995 568999999999999999999999999999999999999 68899999999999999997766 8
Q ss_pred EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 433 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 433 ~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
+..+.+|.++|++++| ++. .+++++.|+.+++|...-
T Consensus 378 ~~~~~~h~~~v~~l~~--~~~-------~l~s~s~Dg~i~iwd~~~ 414 (435)
T 1p22_A 378 LRTLVEHSGRVFRLQF--DEF-------QIVSSSHDDTILIWDFLN 414 (435)
T ss_dssp EEEECCCSSCCCCEEE--CSS-------CEEECCSSSEEEEEC---
T ss_pred eeeccCCCCCeEEEEe--CCC-------EEEEEeCCCEEEEEECCC
Confidence 8899999999999999 555 678888899999998643
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6.4e-30 Score=243.68 Aligned_cols=239 Identities=22% Similarity=0.381 Sum_probs=202.0
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+.+|...|++++|+|++++|++|+.||+|++|++.+++... ...+|...+.++. +++..++
T Consensus 63 ~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~-----------------~~~~h~~~~~~~~--~~~~~l~ 123 (318)
T 4ggc_A 63 MEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR-----------------NMTSHSARVGSLS--WNSYILS 123 (318)
T ss_dssp CCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-----------------EEECCSSCEEEEE--EETTEEE
T ss_pred ecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEE-----------------EecCccceEEEee--cCCCEEE
Confidence 35788899999999999999999999999999999876321 1223455666655 4567999
Q ss_pred EEECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce----EEEEeeccCCeEEEE
Q 010754 291 TGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW----KQQFEFHSGPTLDVD 364 (502)
Q Consensus 291 s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~----~~~~~~~~~~v~~v~ 364 (502)
+|+.++.+++|+... .....+.+|...+..+.|++++++|++++.|++|++||+++++. ......+.+.+..+.
T Consensus 124 s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 203 (318)
T 4ggc_A 124 SGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVA 203 (318)
T ss_dssp EEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEE
T ss_pred EEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEE
Confidence 999999999999663 55667889999999999999999999999999999999987653 445566778899999
Q ss_pred ecCCC--E--EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCeeEEEecc
Q 010754 365 WRNNV--S--FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 365 ~~~~~--~--~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s--~dg~i~iwd~~~~~~~~~~~~ 438 (502)
+.+.. . +++++.++.|++||........... +...+..+.|+|++..+++++ .||.|+|||+.+++++..+.+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~g 282 (318)
T 4ggc_A 204 WCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKG 282 (318)
T ss_dssp ECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECC
T ss_pred ecCCCCcEEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcC
Confidence 97643 2 3456788999999999888766655 777899999999999887765 799999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|.++|++++|+|+|. .|++++.|+.+++|+.
T Consensus 283 H~~~V~~l~~spdg~-------~l~S~s~D~~v~iWd~ 313 (318)
T 4ggc_A 283 HTSRVLSLTMSPDGA-------TVASAAADETLRLWRC 313 (318)
T ss_dssp CSSCEEEEEECTTSS-------CEEEEETTTEEEEECC
T ss_pred CCCCEEEEEEcCCCC-------EEEEEecCCeEEEEEC
Confidence 999999999999998 7889999999999975
No 88
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=4.7e-30 Score=258.47 Aligned_cols=254 Identities=20% Similarity=0.314 Sum_probs=214.3
Q ss_pred cccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeec
Q 010754 192 IATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK 267 (502)
Q Consensus 192 ~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (502)
+++.+.+..+.+. ...+..+.+|.+.|.+++|+|++ +|++|+.||+|++||+.+++..
T Consensus 135 l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~----------------- 196 (464)
T 3v7d_B 135 VITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCT----------------- 196 (464)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEE-----------------
T ss_pred EEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEE-----------------
Confidence 3444444444443 23567889999999999999988 9999999999999999876521
Q ss_pred CccccCCCCeEEEEEC--CCCCEEEEEECCCeEEEEECCCce------------------------EEEecCccCCeEEE
Q 010754 268 GRTNEKSKDVTTLDWN--GEGTLLATGSYDGQARIWSTNGDL------------------------KCTLSKHKGPIFSL 321 (502)
Q Consensus 268 ~~~~~~~~~v~~l~~s--~~g~~l~s~~~dg~i~iwd~~~~~------------------------~~~~~~~~~~v~~l 321 (502)
....+|...|.+++|+ +++.++++|+.||.|++||+.... ...+.+|...|.++
T Consensus 197 ~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 276 (464)
T 3v7d_B 197 HVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV 276 (464)
T ss_dssp EEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE
T ss_pred EEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE
Confidence 1223567889999998 578999999999999999976432 55677888888887
Q ss_pred EEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCc
Q 010754 322 KWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 400 (502)
Q Consensus 322 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~ 400 (502)
+++++++++++.||.|++||+++++.+..+..|...+.++.|+++ ..+++++.|+.|++||+.+++++..+.+|...
T Consensus 277 --~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~ 354 (464)
T 3v7d_B 277 --SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTAL 354 (464)
T ss_dssp --EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSC
T ss_pred --cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCc
Confidence 567899999999999999999999999999999999999999775 57899999999999999999999999999999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|.+++|+ +.+|++|+.||.|++||+.++.....+. |...+..++|+|++. .+++ +.++.+++|+.
T Consensus 355 v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~l~~-~~dg~i~iwd~ 419 (464)
T 3v7d_B 355 VGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFYVSDN-------ILVS-GSENQFNIYNL 419 (464)
T ss_dssp EEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEEECSS-------EEEE-EETTEEEEEET
T ss_pred EEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEEeCCC-------EEEE-ecCCeEEEEEC
Confidence 9999998 5799999999999999999988766654 667788999999987 4444 44899999974
No 89
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=1.6e-30 Score=271.03 Aligned_cols=240 Identities=15% Similarity=0.236 Sum_probs=212.8
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCC-eEEEEECC--CCCEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKD-VTTLDWNG--EGTLL 289 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~l~~s~--~g~~l 289 (502)
.|.+.|.+++|+|++++|++++ ++.|++|++.++.... .......+|... |++++|+| ++++|
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~-------------~~~~~~~~h~~~~v~~~~~sp~~~~~~l 81 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKV-------------PPVVQFTGHGSSVVTTVKFSPIKGSQYL 81 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSS-------------CSEEEECTTTTSCEEEEEECSSTTCCEE
T ss_pred CccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCcc-------------ccceEEecCCCceEEEEEECcCCCCCEE
Confidence 6889999999999999999998 7899999998751000 011223456788 99999999 99999
Q ss_pred EEEECCCeEEEEECC---------CceEEEecCccCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCceEEEEeec
Q 010754 290 ATGSYDGQARIWSTN---------GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFEFH 356 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~---------~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d----~~i~~wd~~~~~~~~~~~~~ 356 (502)
++|+.||.|++||+. ......+..|..+|.+++|+|++++|++++.+ +.|++|| +++.+..+..|
T Consensus 82 ~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~ 159 (615)
T 1pgu_A 82 CSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGH 159 (615)
T ss_dssp EEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSC
T ss_pred EEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecC
Confidence 999999999999984 35566778899999999999999999999988 6888888 67788889999
Q ss_pred cCCeEEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCCC---cEEEEEEcCC-CCEEEEEeCCCcEEEEECCCC
Q 010754 357 SGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQG---EVNCVKWDPT-GSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 357 ~~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~---~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~ 430 (502)
...|.++.|++++ .+++++.|+.|++||+.+++.+..+.+|.. .|++++|+|+ +++|++++.||.|++||+.++
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 239 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSG 239 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTC
T ss_pred CccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCC
Confidence 9999999998876 699999999999999999999999999999 9999999999 999999999999999999999
Q ss_pred eeEEEe-c---cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 431 KYVHDL-R---EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 431 ~~~~~~-~---~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.+..+ . .|..+|.+++|+ ++. .+++++.++.+++|+.
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~~-------~l~~~~~d~~i~~wd~ 281 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DSQ-------KFATVGADATIRVWDV 281 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SSS-------EEEEEETTSEEEEEET
T ss_pred CEeEEecccccccCCceEEEEEc-CCC-------EEEEEcCCCcEEEEEC
Confidence 999999 6 899999999999 887 7888888899999974
No 90
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.98 E-value=2.8e-30 Score=248.98 Aligned_cols=233 Identities=16% Similarity=0.183 Sum_probs=201.3
Q ss_pred eEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEec-CCCCccCCCCCCCceeEEEeeecCcccc--CCCCeEEEEEC
Q 010754 208 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTI-ADGTSNGGAQNGPLNVLVLKHVKGRTNE--KSKDVTTLDWN 283 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~l~~s 283 (502)
...+.+|...|.+++|+|+++ +|++|+.||.|++|++ .++.. ..... |...|++++|+
T Consensus 49 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~------------------~~~~~~~~~~~v~~l~~~ 110 (342)
T 1yfq_A 49 LLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF------------------QALTNNEANLGICRICKY 110 (342)
T ss_dssp EEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE------------------EECBSCCCCSCEEEEEEE
T ss_pred ceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce------------------EeccccCCCCceEEEEeC
Confidence 566779999999999999999 9999999999999999 76542 11223 67889999999
Q ss_pred CCCCEEEEEECCCeEEEEECCC---------ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Cc--eEE
Q 010754 284 GEGTLLATGSYDGQARIWSTNG---------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EE--WKQ 351 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~---------~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~--~~~ 351 (502)
| +++|++++.||.|++||+.. ........|...|.+++|+|++ +++++.|+.|++||+++ +. ...
T Consensus 111 ~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~ 187 (342)
T 1yfq_A 111 G-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTI 187 (342)
T ss_dssp T-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEE
T ss_pred C-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCc--EEEEeCCCeEEEEECCcccccccee
Confidence 9 99999999999999999764 3222223388999999999887 99999999999999988 54 334
Q ss_pred EEeeccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCC------cceEEEecCCC---------cEEEEEEcCCCCEEE
Q 010754 352 QFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGEN------RPIKTFAGHQG---------EVNCVKWDPTGSLLA 414 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~------~~~~~~~~h~~---------~i~~l~~sp~g~~la 414 (502)
....+...+.++.|++ +..+++++.||.|++|++... +.+..+.+|.. .|++++|+|++++|+
T Consensus 188 ~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~ 267 (342)
T 1yfq_A 188 EESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLY 267 (342)
T ss_dssp EECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEE
T ss_pred eecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEE
Confidence 4456788999999987 567999999999999999887 78889988865 999999999999999
Q ss_pred EEeCCCcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCCCCCCCCccEEEEeecCc
Q 010754 415 SCSDDVTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILARLIPY 470 (502)
Q Consensus 415 s~s~dg~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~~~~~~~~~l~las~~~~ 470 (502)
+|+.||.|++||+.+++++..+.+| ..+|++++ |+|. .+++++.|+.
T Consensus 268 ~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~-------~l~s~s~Dg~ 315 (342)
T 1yfq_A 268 TAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDN-------ILCLATSDDT 315 (342)
T ss_dssp EEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSS-------EEEEEEECTH
T ss_pred EecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCC-------eEEEEecCCc
Confidence 9999999999999999999999998 99999999 9988 7788888886
No 91
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.98 E-value=1e-29 Score=253.87 Aligned_cols=233 Identities=21% Similarity=0.389 Sum_probs=205.7
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
....+|...|.|++| ++++|++|+.||+|++||+.+++.. ....+|...|++++| ++++
T Consensus 127 ~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~-----------------~~~~~h~~~v~~l~~--~~~~ 185 (435)
T 1p22_A 127 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECK-----------------RILTGHTGSVLCLQY--DERV 185 (435)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEE-----------------EEECCCSSCEEEEEC--CSSE
T ss_pred ecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEE-----------------EEEcCCCCcEEEEEE--CCCE
Confidence 344567788999887 7899999999999999999876531 122356788999999 7889
Q ss_pred EEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceE---EEEeeccCCeEEEE
Q 010754 289 LATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK---QQFEFHSGPTLDVD 364 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~---~~~~~~~~~v~~v~ 364 (502)
|++|+.||.|++||+. +.....+..|...|.+++|++ ..+++|+.||.|++||+.++... ..+..|...|.++.
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 9999999999999976 567778889999999999974 69999999999999999887755 66778999999999
Q ss_pred ecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 365 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 365 ~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
| .+..+++++.|+.|++||+.+++.+..+.+|...|.++.|+ +.+|++|+.||.|++||+++++++..+.+|...|.
T Consensus 264 ~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 340 (435)
T 1p22_A 264 F-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 340 (435)
T ss_dssp E-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred e-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEE
Confidence 9 66789999999999999999999999999999999999995 78999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+++| ++. .+++++.|+.+++|+.
T Consensus 341 ~~~~--~~~-------~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 341 CIRF--DNK-------RIVSGAYDGKIKVWDL 363 (435)
T ss_dssp EEEC--CSS-------EEEEEETTSCEEEEEH
T ss_pred EEEe--cCC-------EEEEEeCCCcEEEEEC
Confidence 9999 454 7888999999999985
No 92
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=7.1e-30 Score=252.23 Aligned_cols=242 Identities=21% Similarity=0.385 Sum_probs=202.9
Q ss_pred eEEeccCCCceE--EEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 208 VTILEGHTSEVC--ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 208 ~~~l~~H~~~V~--~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
+....+|...+. +++|++ ..+++++.|+.|++|++.++.... .. ...|...|++++|+|+
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~--~~l~~~~~d~~v~lw~~~~~~~~~-------------~~---~~~~~~~v~~v~~s~~ 145 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSN--LNVVAVALERNVYVWNADSGSVSA-------------LA---ETDESTYVASVKWSHD 145 (401)
T ss_dssp EEECTTCCCCTTCBCEEECT--TSEEEEEETTEEEEEETTTCCEEE-------------EE---ECCTTCCEEEEEECTT
T ss_pred eeeCCCCcCCceEEEEeecC--CCEEEEECCCeEEEeeCCCCcEeE-------------ee---ecCCCCCEEEEEECCC
Confidence 344457776654 456654 568888899999999998875311 11 1125678999999999
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCceEEEEeeccCCeEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~~~~~~~~v~~v 363 (502)
+++|++|+.||.|++||+. +.....+..|...|.+++|+ +++|++++.||.|++||++ .+..+..+..|...|.++
T Consensus 146 ~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 223 (401)
T 4aez_A 146 GSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGL 223 (401)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEE
T ss_pred CCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEE
Confidence 9999999999999999976 56777888999999999995 5799999999999999998 566788888999999999
Q ss_pred EecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC-CEEEEEe--CCCcEEEEECCCCeeEEEeccC
Q 010754 364 DWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCS--DDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 364 ~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g-~~las~s--~dg~i~iwd~~~~~~~~~~~~h 439 (502)
+|+++ ..|++++.|+.|++||++++.++..+.+|...|.+++|+|++ .++++|+ .||.|++||+.+++++..+. +
T Consensus 224 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~ 302 (401)
T 4aez_A 224 AWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-A 302 (401)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-C
T ss_pred EEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-C
Confidence 99875 468999999999999999999999999999999999999976 5666665 79999999999999998886 6
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEe--ecCceEEEEee
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILAR--LIPYFLYWICS 477 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las--~~~~~~iw~~~ 477 (502)
...|.+++|+|+|. .+++++ .++.+++|...
T Consensus 303 ~~~v~~~~~s~~~~-------~l~~~~g~~dg~i~v~~~~ 335 (401)
T 4aez_A 303 GSQVTSLIWSPHSK-------EIMSTHGFPDNNLSIWSYS 335 (401)
T ss_dssp SSCEEEEEECSSSS-------EEEEEECTTTCEEEEEEEE
T ss_pred CCcEEEEEECCCCC-------eEEEEeecCCCcEEEEecC
Confidence 67899999999998 666644 57889999754
No 93
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.6e-30 Score=279.48 Aligned_cols=222 Identities=16% Similarity=0.205 Sum_probs=187.1
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
....||.+.|++++|+|++++||+|+.||+|+||+..+.... .. ..|...|++++|+| |++
T Consensus 11 ~~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~-------------~~-----~~~~~~V~~l~fsp-g~~ 71 (902)
T 2oaj_A 11 TNKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV-------------IK-----LEDRSAIKEMRFVK-GIY 71 (902)
T ss_dssp EEEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE-------------EE-----CSSCCCEEEEEEET-TTE
T ss_pred ccccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE-------------EE-----cCCCCCEEEEEEcC-CCE
Confidence 344699999999999999999999999999999997654311 10 12466899999999 889
Q ss_pred EEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEE-----------EEeec
Q 010754 289 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-----------QFEFH 356 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~-----------~~~~~ 356 (502)
|++++.|+.|+|||+.. ..+..+. |...|++++|+|++++|++|+.||+|++||++++.... .+..|
T Consensus 72 L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 72 LVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp EEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred EEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC
Confidence 99999999999999874 4455554 77899999999999999999999999999999887531 12457
Q ss_pred cCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecC------------------CCcEEEEEEcCCCCEEEEE
Q 010754 357 SGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------------------QGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 357 ~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h------------------~~~i~~l~~sp~g~~las~ 416 (502)
.++|.+++|+|+ ..+++++.|+.| +||+++++++..+.+| ...|++++|+|+|++||+|
T Consensus 151 ~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasg 229 (902)
T 2oaj_A 151 LSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITI 229 (902)
T ss_dssp CCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEE
T ss_pred CCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEE
Confidence 789999999986 578999999999 9999999998888766 4679999999999999999
Q ss_pred eCCCcEEEEECCCCeeEEE--ec---c-------------CCCcEEEEEEccC
Q 010754 417 SDDVTAKIWNMKQDKYVHD--LR---E-------------HSKEIYTIRWSPT 451 (502)
Q Consensus 417 s~dg~i~iwd~~~~~~~~~--~~---~-------------h~~~i~~v~~sp~ 451 (502)
+.||+|++||+++++++.. +. . |..+|++++|+|.
T Consensus 230 s~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~ 282 (902)
T 2oaj_A 230 HEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCE 282 (902)
T ss_dssp ETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEEC
T ss_pred ECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEec
Confidence 9999999999999988753 31 2 3457999999764
No 94
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=1.3e-30 Score=255.64 Aligned_cols=212 Identities=24% Similarity=0.391 Sum_probs=182.6
Q ss_pred eEEeccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-C
Q 010754 208 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-E 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~ 285 (502)
...+.+|.+.|.++.|+|+ +..|++|+.|++|++||+.++.....+ ......+|...|.+++|++ +
T Consensus 150 ~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~------------~~~~~~~h~~~v~~~~~~~~~ 217 (380)
T 3iz6_a 150 SRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIF------------GSEFPSGHTADVLSLSINSLN 217 (380)
T ss_dssp CCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEE------------CCCSSSSCCSCEEEEEECSSS
T ss_pred eeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEe------------ecccCCCCccCeEEEEeecCC
Confidence 4578899999999999997 567999999999999999887632110 0112246778999999987 8
Q ss_pred CCEEEEEECCCeEEEEECC--CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-----
Q 010754 286 GTLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG----- 358 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~----- 358 (502)
+++|++|+.||.|++||++ +.....+.+|...|.+++|+|++++|++|+.||+|++||++++..+..+..+..
T Consensus 218 ~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~ 297 (380)
T 3iz6_a 218 ANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNE 297 (380)
T ss_dssp CCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCS
T ss_pred CCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccc
Confidence 8999999999999999986 466778899999999999999999999999999999999999998888765432
Q ss_pred --CeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEE----ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 359 --PTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 359 --~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~----~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
.+.+++|++++ .+++|+.||.|++||+..++.+..+ .+|.+.|++++|+|+|++|++|+.||+|+||++...+
T Consensus 298 ~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 298 LPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp SCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred cCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 47899998754 5788899999999999999888777 6799999999999999999999999999999987654
No 95
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=6.8e-31 Score=258.70 Aligned_cols=246 Identities=14% Similarity=0.111 Sum_probs=172.3
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC----
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG---- 284 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~---- 284 (502)
.....|...+....+++++.+||+|+.|++|+|||+.++.. ..........+|...|++++|+|
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------------~~~~~~~~~~gH~~~v~~v~~~p~~~~ 150 (393)
T 4gq1_A 83 YSENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI------------ITQHVLGGKSGHHNFVNDIDIADVYSA 150 (393)
T ss_dssp EECC----------CCEEEEEEEEEETTSCEEEEEEETTEE------------EEEEEECTTTSCSSCEEEEEEEEEECT
T ss_pred ccccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc------------ceeeeecccCCCCCceEEEEEcccccc
Confidence 34455666666666666788999999999999999987642 11223455678899999999997
Q ss_pred ----CCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEE-----
Q 010754 285 ----EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF----- 353 (502)
Q Consensus 285 ----~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~----- 353 (502)
++++||+|+.|++|+|||+. +.....+..|..+|.+++|+|++ .+|++++.|++|++||+++++.....
T Consensus 151 ~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~ 230 (393)
T 4gq1_A 151 DNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTEL 230 (393)
T ss_dssp TCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------
T ss_pred ccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCC
Confidence 88999999999999999975 56677788899999999999987 47999999999999999887654332
Q ss_pred --------------------eeccCCeEEEEec--CCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcC---
Q 010754 354 --------------------EFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP--- 408 (502)
Q Consensus 354 --------------------~~~~~~v~~v~~~--~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp--- 408 (502)
..|...+.++.|. ++..+++++.|+.+++||+..+.....+..|...+..+.+.|
T Consensus 231 ~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~ 310 (393)
T 4gq1_A 231 VKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQ 310 (393)
T ss_dssp CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEE
T ss_pred cccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccc
Confidence 2355567788884 356789999999999999998877776666665555444333
Q ss_pred -----------------CCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCce
Q 010754 409 -----------------TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYF 471 (502)
Q Consensus 409 -----------------~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~ 471 (502)
++.++++|+.||.|+|||+.+++++..+..|..+|++++|||||+ .|.+|+.++ +
T Consensus 311 ~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~-------~LA~as~~G-v 382 (393)
T 4gq1_A 311 GISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGS-------HLAIATEGS-V 382 (393)
T ss_dssp EECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSS-------EEEEEESSE-E
T ss_pred cccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCC-------EEEEEeCCC-e
Confidence 344678889999999999999999888888999999999999998 555554444 4
Q ss_pred EEE
Q 010754 472 LYW 474 (502)
Q Consensus 472 ~iw 474 (502)
.+|
T Consensus 383 ~lv 385 (393)
T 4gq1_A 383 LLT 385 (393)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 96
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=3.1e-30 Score=254.92 Aligned_cols=241 Identities=18% Similarity=0.308 Sum_probs=201.5
Q ss_pred ceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC-CCCEEEEEEC
Q 010754 217 EVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSY 294 (502)
Q Consensus 217 ~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~-~g~~l~s~~~ 294 (502)
....++++|+.. ++++++.||.|+||++.+..... .......+|...|++++|+| ++++|++|+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-------------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~ 102 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-------------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSE 102 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-------------TTCCCBCCCSSCEEEEEECTTCTTEEEEEET
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-------------CCCceEecCCCCEEEEEeCCCCCCEEEEEeC
Confidence 345688999764 55568899999999996542110 01223456788999999999 9999999999
Q ss_pred CCeEEEEECCC--------ceEEEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEEE--eeccCCeEEE
Q 010754 295 DGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF--EFHSGPTLDV 363 (502)
Q Consensus 295 dg~i~iwd~~~--------~~~~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~~--~~~~~~v~~v 363 (502)
||.|+||++.. .....+.+|...|.+++|+|++ ++|++++.|+.|++||+++++.+..+ ..|...|.++
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 99999999864 4567888999999999999998 69999999999999999999999998 7899999999
Q ss_pred EecCCC-EEEEEeCCCeEEEEEcCCCcceEEE-ecCCCc-EEEEEEcCCCCEEEEE---eCCCcEEEEECCCCee-EEEe
Q 010754 364 DWRNNV-SFATSSTDNMIYVCKIGENRPIKTF-AGHQGE-VNCVKWDPTGSLLASC---SDDVTAKIWNMKQDKY-VHDL 436 (502)
Q Consensus 364 ~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~-i~~l~~sp~g~~las~---s~dg~i~iwd~~~~~~-~~~~ 436 (502)
+|++++ .|++++.|+.|++||+++++.+..+ .+|.+. +.++.|+|++++|++| +.|+.|++||+++++. +...
T Consensus 183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 183 DWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred EECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 998754 6899999999999999999999988 788776 8999999999999999 7899999999988764 3232
Q ss_pred c-cCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 437 R-EHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 437 ~-~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
. .|...|.+++|+|+|. .+++++ .|+.+++|...
T Consensus 263 ~~~~~~~v~~~~~s~~~~-------~l~~~g~~dg~i~i~d~~ 298 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTN-------IVYLCGKGDSSIRYFEIT 298 (402)
T ss_dssp ECCCCSSCEEEEEETTTT-------EEEEEETTCSCEEEEEEC
T ss_pred eccCCCceeEEEEcCCCC-------EEEEEEcCCCeEEEEEec
Confidence 2 5777899999999998 554444 58999999754
No 97
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=5e-31 Score=251.71 Aligned_cols=223 Identities=26% Similarity=0.416 Sum_probs=181.8
Q ss_pred ccccCCCCceeeeCC---C---ceEEeccCCCceEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEE
Q 010754 191 DIATTSASESFEIPN---S---DVTILEGHTSEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLV 262 (502)
Q Consensus 191 ~~~~~~~~~~~~~~~---~---~~~~l~~H~~~V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~ 262 (502)
.+++.+.+..+.+.. . .+..+.+|.+.|++++|+| ++++|++|+.|++|++||+.++... .
T Consensus 27 ~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~-----------~ 95 (316)
T 3bg1_A 27 RLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWE-----------K 95 (316)
T ss_dssp EEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCC-----------E
T ss_pred EEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcce-----------E
Confidence 455555555555432 2 3567899999999999986 4899999999999999999865311 0
Q ss_pred EeeecCccccCCCCeEEEEECCC--CCEEEEEECCCeEEEEECCCce----EEEecCccCCeEEEEEecC----------
Q 010754 263 LKHVKGRTNEKSKDVTTLDWNGE--GTLLATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKK---------- 326 (502)
Q Consensus 263 ~~~~~~~~~~~~~~v~~l~~s~~--g~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~v~~l~~~~~---------- 326 (502)
. ....+|...|++++|+|+ +.+|++|+.||.|++||+.... ...+..|...|.+++|+|+
T Consensus 96 ~----~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~ 171 (316)
T 3bg1_A 96 S----HEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHP 171 (316)
T ss_dssp E----EEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------C
T ss_pred E----EEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccc
Confidence 1 112356788999999998 8899999999999999987531 3455689999999999997
Q ss_pred -------CCEEEEEecCCeEEEEEcCCC---ceEEEEeeccCCeEEEEecCC-----CEEEEEeCCCeEEEEEcCCCc--
Q 010754 327 -------GDYLLTGSCDKTAIVWDVKTE---EWKQQFEFHSGPTLDVDWRNN-----VSFATSSTDNMIYVCKIGENR-- 389 (502)
Q Consensus 327 -------~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~v~~v~~~~~-----~~~~~~~~d~~i~i~d~~~~~-- 389 (502)
+++|++|+.|++|++||++.. ..+..+..|...|.+++|+|+ ..|++++.|++|++|++....
T Consensus 172 ~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~ 251 (316)
T 3bg1_A 172 SGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN 251 (316)
T ss_dssp CSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC
T ss_pred cccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc
Confidence 468999999999999999765 456677889999999999886 579999999999999997631
Q ss_pred --ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 390 --PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 390 --~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
....+..|...|.+++|+|++++||+|+.||+|+||+..
T Consensus 252 ~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 252 TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 234566789999999999999999999999999999975
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.2e-30 Score=255.37 Aligned_cols=252 Identities=12% Similarity=0.020 Sum_probs=200.6
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC---ccCCCCCCCc-----ee----------E----------------
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGT---SNGGAQNGPL-----NV----------L---------------- 261 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~---~~~~~~~~~~-----~~----------~---------------- 261 (502)
.++.+++|+|+|++|++++ ++.|++||+.+++ .......... .. .
T Consensus 5 ~p~~~v~~s~dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 5789999999999776664 6899999998887 3221111000 00 0
Q ss_pred ------EEeeecCccccCCCCeEEEEECCCCCEE-EEEECCCeEEEEECC---CceEEEec--CccCCeEEEEEecCCCE
Q 010754 262 ------VLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTN---GDLKCTLS--KHKGPIFSLKWNKKGDY 329 (502)
Q Consensus 262 ------~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~s~~~dg~i~iwd~~---~~~~~~~~--~~~~~v~~l~~~~~~~~ 329 (502)
...........|...|++++|+|++++| ++|+.||.|+|||+. +.....+. .|...|.+++|+|++++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~ 163 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTT 163 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCE
Confidence 0000000112455679999999999996 889999999999976 44555554 56788999999999999
Q ss_pred EEEEecCCeEEEEEcCCCceEE----EEeeccCCeEEEEecCC---C-EEEEEeCCCeEEEEEcCCCcceEE-EecCCCc
Q 010754 330 LLTGSCDKTAIVWDVKTEEWKQ----QFEFHSGPTLDVDWRNN---V-SFATSSTDNMIYVCKIGENRPIKT-FAGHQGE 400 (502)
Q Consensus 330 l~s~~~d~~i~~wd~~~~~~~~----~~~~~~~~v~~v~~~~~---~-~~~~~~~d~~i~i~d~~~~~~~~~-~~~h~~~ 400 (502)
|++++.+|.|++|++.++.... .+..|...|.+++|+++ + .+++++.|+.|++||+.++..+.. +.+|...
T Consensus 164 l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~ 243 (450)
T 2vdu_B 164 VIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHF 243 (450)
T ss_dssp EEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSC
T ss_pred EEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCc
Confidence 9999999999999998877544 67789999999999886 5 688999999999999999998887 5589999
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC-------------------------CCcEEEEEEccCCCCC
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH-------------------------SKEIYTIRWSPTGSGT 455 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h-------------------------~~~i~~v~~sp~g~~~ 455 (502)
|++++|+ ++++|++|+.|+.|+|||+.+++++..+..+ ...|.+++|+|+|.
T Consensus 244 v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~-- 320 (450)
T 2vdu_B 244 VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLP-- 320 (450)
T ss_dssp EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSS--
T ss_pred eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCC--
Confidence 9999999 9999999999999999999999988887632 35699999999988
Q ss_pred CCCCccEEEEe-ecCceEEEEe
Q 010754 456 NNPNQQLILAR-LIPYFLYWIC 476 (502)
Q Consensus 456 ~~~~~~l~las-~~~~~~iw~~ 476 (502)
.+++++ .++.+++|..
T Consensus 321 -----~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 321 -----FVAFFVEATKCIIILEM 337 (450)
T ss_dssp -----EEEEEETTCSEEEEEEE
T ss_pred -----EEEEEECCCCeEEEEEe
Confidence 666676 6888999987
No 99
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.3e-29 Score=264.15 Aligned_cols=253 Identities=17% Similarity=0.244 Sum_probs=219.5
Q ss_pred CceEEeccCCCc-eEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 206 SDVTILEGHTSE-VCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 206 ~~~~~l~~H~~~-V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
.....+.+|.+. |++++|+| ++++|++|+.||+|++|++.++.... .. ..........|...|.+++|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~-----~~----~~~~~~~~~~~~~~v~~~~~ 124 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN-----SV----EVNVKSEFQVLAGPISDISW 124 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT-----EE----EEEEEEEEECCSSCEEEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc-----cc----cccccchhhcccccEEEEEE
Confidence 467889999999 99999999 99999999999999999996541100 00 01111223346778999999
Q ss_pred CCCCCEEEEEECC----CeEEEEECCCceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 283 NGEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 283 s~~g~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
+|++++|++++.+ +.|++|| .+.....+..|...|.+++|+|+++ .+++++.|+.|++||+.+++.+..+..|.
T Consensus 125 s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 125 DFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp CTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred eCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 9999999999988 7999999 5667788899999999999999997 89999999999999999999999999999
Q ss_pred C---CeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEE-e---cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 358 G---PTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTF-A---GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 358 ~---~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~-~---~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
. .+.+++|+++ ..+++++.|+.|++||+.+++.+..+ . +|...|.+++|+ ++++|++++.||.|++||+.
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 9 9999999876 46888999999999999999999998 6 899999999999 99999999999999999999
Q ss_pred CCeeEEEeccC----CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 429 QDKYVHDLREH----SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 429 ~~~~~~~~~~h----~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+++++..+..+ ...+.++.|+ ++. .+++++.++.+++|...
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-------~l~~~~~~g~i~~~d~~ 327 (615)
T 1pgu_A 283 TSKCVQKWTLDKQQLGNQQVGVVAT-GNG-------RIISLSLDGTLNFYELG 327 (615)
T ss_dssp TTEEEEEEECCTTCGGGCEEEEEEE-ETT-------EEEEEETTSCEEEEETT
T ss_pred CCcEEEEEcCCCCcccCceeEEEeC-CCC-------eEEEEECCCCEEEEECC
Confidence 99999988866 4678999996 665 78888999999999754
No 100
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=2.2e-29 Score=252.18 Aligned_cols=237 Identities=24% Similarity=0.437 Sum_probs=194.3
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+..+.+|...|.+++|+ +..|++|+.||+|++||+.+++.. .....|...|.+++| +++
T Consensus 192 ~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~-----------------~~~~~~~~~v~~~~~--~~~ 250 (445)
T 2ovr_B 192 IHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCL-----------------HVLMGHVAAVRCVQY--DGR 250 (445)
T ss_dssp EEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEE-----------------EEEECCSSCEEEEEE--CSS
T ss_pred EEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEE-----------------EEEcCCcccEEEEEE--CCC
Confidence 44455566666665553 344566666666666665544311 122356778999999 788
Q ss_pred EEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 288 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
++++|+.||.|++||+. +.....+..|...|.++.| ++.++++++.|+.|++||+++++.+..+..|...+.++.+.
T Consensus 251 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~ 328 (445)
T 2ovr_B 251 RVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK 328 (445)
T ss_dssp CEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE
T ss_pred EEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe
Confidence 99999999999999976 5667788899999999999 78899999999999999999999999999999999999985
Q ss_pred CCCEEEEEeCCCeEEEEEcCCCcceEEEec---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe-----cc
Q 010754 367 NNVSFATSSTDNMIYVCKIGENRPIKTFAG---HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL-----RE 438 (502)
Q Consensus 367 ~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~---h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~-----~~ 438 (502)
+..+++++.||.|++||+.+++++..+.+ |...|++++|+ +++|++|+.||.|++||+.+++.+..+ .+
T Consensus 329 -~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 405 (445)
T 2ovr_B 329 -DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGG 405 (445)
T ss_dssp -TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEEECTTGG
T ss_pred -CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCCceeeeeeccccCC
Confidence 45899999999999999999999999987 88899999996 679999999999999999999999888 47
Q ss_pred CCCcEEEEEEccCCCCCCCCCccEEEEeecCc----eEEEEee
Q 010754 439 HSKEIYTIRWSPTGSGTNNPNQQLILARLIPY----FLYWICS 477 (502)
Q Consensus 439 h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~----~~iw~~~ 477 (502)
|.+.|++++|+|+|. .+++++.|+. +.+|++.
T Consensus 406 ~~~~v~~~~~s~~~~-------~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 406 SGGVVWRIRASNTKL-------VCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp GTCEEEEEEECSSEE-------EEEEECSSSSSCCEEEEEECC
T ss_pred CCceEEEEEecCCEE-------EEEEcccCCCCccEEEEEECC
Confidence 888999999999987 6667777776 6777654
No 101
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=3.7e-29 Score=250.59 Aligned_cols=236 Identities=20% Similarity=0.361 Sum_probs=208.6
Q ss_pred ceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
....+.+|.+.|.. ++++++++|++|+.||+|++||+.+++.. ....+|...|++++|+ +
T Consensus 110 ~~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~~-----------------~~~~~h~~~v~~~~~~--~ 169 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKCL-----------------RTLVGHTGGVWSSQMR--D 169 (445)
T ss_dssp CCEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCEE-----------------EECCCCSSCEEEEEEE--T
T ss_pred eeEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcEE-----------------EEEcCCCCCEEEEEec--C
Confidence 34678999987643 35557899999999999999999876532 1223567889999997 5
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
+++++|+.||.|++||+. +.....+..|...|.++.|+ ++.+++|+.||+|++||+.+++.+..+..|...+.++.|
T Consensus 170 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 170 NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE
Confidence 699999999999999976 56777888999999999996 578999999999999999999999999999999999999
Q ss_pred cCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 366 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 366 ~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
.+..+++++.|+.|++||+.+++++..+.+|...|.++.| ++.+|++|+.||.|++||+++++++..+.+|...+.+
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~ 324 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSG 324 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEE
T ss_pred -CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEE
Confidence 6677999999999999999999999999999999999999 7899999999999999999999999999999999999
Q ss_pred EEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 446 IRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+.+++ . .+++++.|+.+++|+.
T Consensus 325 ~~~~~--~-------~l~~~~~dg~i~vwd~ 346 (445)
T 2ovr_B 325 MELKD--N-------ILVSGNADSTVKIWDI 346 (445)
T ss_dssp EEEET--T-------EEEEEETTSCEEEEET
T ss_pred EEEeC--C-------EEEEEeCCCeEEEEEC
Confidence 88854 3 6788888999999975
No 102
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=254.15 Aligned_cols=226 Identities=12% Similarity=0.037 Sum_probs=191.3
Q ss_pred eccCCCceEEEEEcCCCCeE-EEEeCCCcEEEEecC--CCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 211 LEGHTSEVCACAWSPAGSLL-ASGSGDSTARIWTIA--DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
..+|.+.|.+++|+|++++| ++|+.||+|+||++. ++.... .+.. ..+...|++++|+|+++
T Consensus 98 ~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~----------~~~~-----~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 98 APPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLK----------LRKR-----FCFSKRPNAISIAEDDT 162 (450)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEE----------EEEE-----EECSSCEEEEEECTTSS
T ss_pred CCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceee----------eeec-----ccCCCCceEEEEcCCCC
Confidence 45788999999999999986 899999999999998 554221 1110 13456799999999999
Q ss_pred EEEEEECCCeEEEEECCCce-----EEEecCccCCeEEEEEecC---CCEEEEEecCCeEEEEEcCCCceEEE-EeeccC
Q 010754 288 LLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNKK---GDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSG 358 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~---~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~ 358 (502)
+|++|+.+|.|++|++.... ...+.+|...|.+++|+|+ +++|++|+.|+.|++||+++++.+.. +.+|..
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~ 242 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH 242 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS
T ss_pred EEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC
Confidence 99999999999999976432 2266789999999999999 99999999999999999999998877 457999
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC-------------------------CCcEEEEEEcCCCCEE
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH-------------------------QGEVNCVKWDPTGSLL 413 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-------------------------~~~i~~l~~sp~g~~l 413 (502)
.|.+++|+.+..+++++.|+.|++||+.+++.+..+..+ ...|.+++|+|++++|
T Consensus 243 ~v~~~~~sd~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l 322 (450)
T 2vdu_B 243 FVSSICCGKDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFV 322 (450)
T ss_dssp CEEEEEECSTTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEE
T ss_pred ceEEEEECCCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEE
Confidence 999999995567999999999999999999988888632 3569999999999999
Q ss_pred EEEe-CCCcEEEEEC--CCC---eeEEEeccCCCcEEEEEEccCC
Q 010754 414 ASCS-DDVTAKIWNM--KQD---KYVHDLREHSKEIYTIRWSPTG 452 (502)
Q Consensus 414 as~s-~dg~i~iwd~--~~~---~~~~~~~~h~~~i~~v~~sp~g 452 (502)
++++ .|+.|+||++ .++ +++..+..| ..|.+++|+|++
T Consensus 323 ~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 323 AFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp EEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred EEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCc
Confidence 9999 8999999999 565 777788887 789999999954
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.9e-29 Score=284.18 Aligned_cols=263 Identities=23% Similarity=0.377 Sum_probs=217.4
Q ss_pred cccccCCCCceeeeC----CCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEee
Q 010754 190 MDIATTSASESFEIP----NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH 265 (502)
Q Consensus 190 ~~~~~~~~~~~~~~~----~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 265 (502)
..+++.+.+..+.++ ...+..+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++..
T Consensus 628 ~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~--------------- 692 (1249)
T 3sfz_A 628 QRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLV--------------- 692 (1249)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE---------------
T ss_pred CEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceE---------------
Confidence 334444444444442 3457888999999999999999999999999999999999887532
Q ss_pred ecCccccCCCCeEEEEECC--CCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEE
Q 010754 266 VKGRTNEKSKDVTTLDWNG--EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 342 (502)
Q Consensus 266 ~~~~~~~~~~~v~~l~~s~--~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~w 342 (502)
.....|...|.+++|+| ++.++++|+.||.|++||+. +.....+.+|...|.+++|+|++++|++++.||+|++|
T Consensus 693 --~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v~vw 770 (1249)
T 3sfz_A 693 --HTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSADGTLRLW 770 (1249)
T ss_dssp --EEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESSSEEEEE
T ss_pred --EEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECCCeEEEE
Confidence 11234678899999999 55689999999999999976 46677888999999999999999999999999999999
Q ss_pred EcCCCceEEEEe-------------------------------------------------------eccCCeEEEEecC
Q 010754 343 DVKTEEWKQQFE-------------------------------------------------------FHSGPTLDVDWRN 367 (502)
Q Consensus 343 d~~~~~~~~~~~-------------------------------------------------------~~~~~v~~v~~~~ 367 (502)
|+.++.....+. .|...+.++.|++
T Consensus 771 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp 850 (1249)
T 3sfz_A 771 DVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSP 850 (1249)
T ss_dssp EGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECS
T ss_pred eCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcC
Confidence 998776544332 4556778888876
Q ss_pred C-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC------------------
Q 010754 368 N-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK------------------ 428 (502)
Q Consensus 368 ~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~------------------ 428 (502)
+ ..+++++.++.|++|++.++..+..+.+|...|++++|+|+|++|++++.||.|++|++.
T Consensus 851 ~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~ 930 (1249)
T 3sfz_A 851 YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVF 930 (1249)
T ss_dssp STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEE
T ss_pred CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEE
Confidence 4 458888999999999999999999999999999999999999999999999988888743
Q ss_pred -------------------------------------------------------------CCeeEEEeccCCCcEEEEE
Q 010754 429 -------------------------------------------------------------QDKYVHDLREHSKEIYTIR 447 (502)
Q Consensus 429 -------------------------------------------------------------~~~~~~~~~~h~~~i~~v~ 447 (502)
+++.+..+.+|...|++++
T Consensus 931 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~ 1010 (1249)
T 3sfz_A 931 QENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQ 1010 (1249)
T ss_dssp ETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEE
T ss_pred cCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEE
Confidence 2344455667888999999
Q ss_pred EccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 448 WSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 448 ~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+|+|. .+++++.|+.+++|..
T Consensus 1011 ~s~dg~-------~l~s~~~dg~i~vwd~ 1032 (1249)
T 3sfz_A 1011 FTADGK-------TLISSSEDSVIQVWNW 1032 (1249)
T ss_dssp ECSSSS-------CEEEECSSSBEEEEET
T ss_pred ECCCCC-------EEEEEcCCCEEEEEEC
Confidence 999988 7888888999999963
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=5.2e-30 Score=248.78 Aligned_cols=235 Identities=12% Similarity=0.149 Sum_probs=181.6
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+..+.+|.+.|++++|+|+|++|++|+.|+ ++||++.+.... ... +...+..++|.++++
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~-----------~~~--------~~~~~~~~~~~~~~~ 71 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI-----------MSQ--------EMRHLSKVRMLHRTN 71 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE-----------EEE--------ECSCCCEEEECTTSS
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee-----------eee--------ecCCeEEEEEcCCCC
Confidence 446688999999999999999999998775 789998764321 000 012477888988888
Q ss_pred EE-EEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEE
Q 010754 288 LL-ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 288 ~l-~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~ 364 (502)
.+ ++|+.|+.|++||... .....+ .+...|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. +...++
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~-~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~---~~~~~~ 144 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRI-KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR---FGGVCE 144 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEE-ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE---EEEEEE
T ss_pred EEEEEECCccEEEEEECCCCcEEEEE-ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc---CCceEE
Confidence 77 5677789999999764 444444 477799999998763 4443 5889999999988 66555544 233344
Q ss_pred ecCCCEEEE--EeCCCeEEEEEcCCCc---------------c-eEEEecCCCcEEEEEEcCCCCEEEEEeCCCc-EEEE
Q 010754 365 WRNNVSFAT--SSTDNMIYVCKIGENR---------------P-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIW 425 (502)
Q Consensus 365 ~~~~~~~~~--~~~d~~i~i~d~~~~~---------------~-~~~~~~h~~~i~~l~~sp~g~~las~s~dg~-i~iw 425 (502)
+++ ..+++ ++.+|.|++||+.++. + +..+.+|.+.|++++|+|+|++||+|+.||+ |+||
T Consensus 145 ~s~-~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 145 FSN-GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp EET-TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred EEc-cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 445 55555 5789999999999865 2 7889999999999999999999999999998 9999
Q ss_pred ECCCCeeEEEec-c-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 426 NMKQDKYVHDLR-E-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 426 d~~~~~~~~~~~-~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
|+++++++..+. + |..+|++++|+|+|. .+++++.|+.+++|+..
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~-------~l~s~s~d~~v~iw~~~ 270 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGS-------KLAVVSDKWTLHVFEIF 270 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSC-------EEEEEETTCEEEEEESS
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCC-------EEEEEECCCEEEEEEcc
Confidence 999999999998 5 999999999999998 78888888999999753
No 105
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-30 Score=251.70 Aligned_cols=225 Identities=9% Similarity=0.028 Sum_probs=180.7
Q ss_pred EEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEE
Q 010754 222 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 301 (502)
Q Consensus 222 ~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iw 301 (502)
.+.+++.+|++|+.||+|++||+.+++... .+. ...|.++.|+|+ +++|+.|+.|++|
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~----------~~~---------~~~v~~~~~~~~---~~s~s~D~~i~~w 100 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTIT----------TIT---------TPNPRTGGEHPA---IISRGPCNRLLLL 100 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEE----------EEE---------EECCCTTCCCCS---EEEECSTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEE----------EEe---------cCCceeeeeCCc---eEEecCCCeEEEE
Confidence 444578899999999999999998876422 111 235777888888 9999999999999
Q ss_pred ECCCce----------EEE-ecCccCCeEEEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEee-ccCCeEEEEecC
Q 010754 302 STNGDL----------KCT-LSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-HSGPTLDVDWRN 367 (502)
Q Consensus 302 d~~~~~----------~~~-~~~~~~~v~~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~v~~~~ 367 (502)
+..+.. ... ...|..+|.+++|+| ++++|++++.||+|++||+++++....+.. +...+.+++|+|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHK 180 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECT
T ss_pred EccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECC
Confidence 866432 222 236678999999999 999999999999999999999998776644 455799999988
Q ss_pred CC-EEEEEeCCCeEEEEEcCCCcce-EEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc---CCC
Q 010754 368 NV-SFATSSTDNMIYVCKIGENRPI-KTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---HSK 441 (502)
Q Consensus 368 ~~-~~~~~~~d~~i~i~d~~~~~~~-~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~---h~~ 441 (502)
++ .+++|+.|+.|++||+++++.+ ..+.+ |.+.|++++|+|+|.+|++++ |+.|++||+++++++..+.. |..
T Consensus 181 dg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~ 259 (343)
T 3lrv_A 181 DSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEF 259 (343)
T ss_dssp TSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC---
T ss_pred CCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeecccccccc
Confidence 65 4777899999999999999987 88888 999999999999999999999 45999999999887666554 444
Q ss_pred cEE--EEEEccCCCCCCCCCccEEEEee-cCceEEEEe
Q 010754 442 EIY--TIRWSPTGSGTNNPNQQLILARL-IPYFLYWIC 476 (502)
Q Consensus 442 ~i~--~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~~ 476 (502)
++. +++|+|+|. .+++++. ++.+++|.+
T Consensus 260 ~~~~~~~~~~~~g~-------~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 260 KTGTVTYDIDDSGK-------NMIAYSNESNSLTIYKF 290 (343)
T ss_dssp --CCEEEEECTTSS-------EEEEEETTTTEEEEEEE
T ss_pred cccceEEEECCCCC-------EEEEecCCCCcEEEEEE
Confidence 444 699999998 6666667 899999965
No 106
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.97 E-value=2e-29 Score=245.48 Aligned_cols=199 Identities=19% Similarity=0.139 Sum_probs=164.9
Q ss_pred cCCCceEEEEEcCCCCeEEEEe--CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
.+...+.+++|+|||++|++++ .|++|+|||+.+++.. ..+ .|...|++++|+|+|++|+
T Consensus 131 ~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~-------------~~~-----~~~~~V~~v~fspdg~~l~ 192 (365)
T 4h5i_A 131 NADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK-------------FEI-----ETRGEVKDLHFSTDGKVVA 192 (365)
T ss_dssp CTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE-------------EEE-----ECSSCCCEEEECTTSSEEE
T ss_pred CcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE-------------EEe-----CCCCceEEEEEccCCceEE
Confidence 4456689999999999887554 6899999999886531 111 2456799999999999999
Q ss_pred EEECCCeEEEEECCCceEE--EecCccCCeEEEEEecCCCEEEEEecCC----eEEEEEcCCCce----EEEEeeccCCe
Q 010754 291 TGSYDGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDK----TAIVWDVKTEEW----KQQFEFHSGPT 360 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~--~~~~~~~~v~~l~~~~~~~~l~s~~~d~----~i~~wd~~~~~~----~~~~~~~~~~v 360 (502)
+++.++.+.+|...+.... ....|...|.+++|+|+++++++++.|+ .+++||+..... ...+..|...|
T Consensus 193 s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V 272 (365)
T 4h5i_A 193 YITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGI 272 (365)
T ss_dssp EECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCE
T ss_pred eccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCe
Confidence 9997665555555555443 3456888999999999999999999887 688999877653 34566788899
Q ss_pred EEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 361 LDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 361 ~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
.+++|+|++ .|++|+.|+.|+|||+.+++++.++ .+|...|++|+|+|||++|||||.|++|+|||+..
T Consensus 273 ~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 273 TSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 999998875 5788999999999999999999886 78999999999999999999999999999999864
No 107
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.4e-29 Score=249.28 Aligned_cols=220 Identities=12% Similarity=0.189 Sum_probs=176.2
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
+|...|.+|+|+|+|.+||+++.||+|++|+... .+..+.....-....|.+++|||+|++||+|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~---------------~l~~l~~~~~~~~~sv~svafSPDG~~LAsg 147 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK---------------MLTNLDSKGNLSSRTYHCFEWNPIESSIVVG 147 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE---------------EEEECCCSSCSTTTCEEEEEECSSSSCEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc---------------eeeeccCCCccccccEEEEEEcCCCCEEEEE
Confidence 5688999999999999999999999999999543 1111111100112369999999999999999
Q ss_pred ECCCeEEEEECCCce--------EEEe----cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce---EEEE-eec
Q 010754 293 SYDGQARIWSTNGDL--------KCTL----SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW---KQQF-EFH 356 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~--------~~~~----~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~---~~~~-~~~ 356 (502)
+.||+|+|||+.+.. ...+ .+|...|.+++|+|+| +++++.|++|++||+.++.. .+.+ .+|
T Consensus 148 s~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h 225 (588)
T 2j04_A 148 NEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNAS 225 (588)
T ss_dssp ETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCC
T ss_pred cCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccc
Confidence 999999999988652 4555 6788899999999999 88999999999999988773 3556 378
Q ss_pred cCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEE--cCCCCEEEEEeCCCcEEEEECCC-----
Q 010754 357 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW--DPTGSLLASCSDDVTAKIWNMKQ----- 429 (502)
Q Consensus 357 ~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~--sp~g~~las~s~dg~i~iwd~~~----- 429 (502)
...|.+++|+ +..+++++ ++.|++||+.+++......+|.+.|..++| +|++..|++++.||+ ++|....
T Consensus 226 ~~~V~svaFs-g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~sp 302 (588)
T 2j04_A 226 RRKITDLKIV-DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTA 302 (588)
T ss_dssp SSCCCCEEEE-TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEEC
T ss_pred cCcEEEEEEE-CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECC
Confidence 8899999999 67788776 699999999988774444489999999999 999999999999999 9998742
Q ss_pred ------------------CeeEEEeccCCCcEEEEEEccCCC
Q 010754 430 ------------------DKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 430 ------------------~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+..+..+. +...|++++|||||.
T Consensus 303 d~~l~a~~d~~v~lW~~~g~~l~~~~-~~~~I~~va~SPdG~ 343 (588)
T 2j04_A 303 DNIIAPYLEKKFKKWSTIWNEFNNYE-TTLVIHGISLSPDGY 343 (588)
T ss_dssp CCSSHHHHHHHHHHTTTTTTSSSSSC-CEEEEEEEEECTTSS
T ss_pred CceEEEEcCCEEEEEECCCCceeeec-cceEEEEEEECCCCC
Confidence 11122222 244599999999998
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.97 E-value=1.6e-28 Score=228.83 Aligned_cols=249 Identities=15% Similarity=0.189 Sum_probs=182.4
Q ss_pred eEEEEEcCCCC---eEEEEeCCCcEEEEecCCC---CccCCCCCCCceeEEEeeec--------CccccCCCCeEEEEEC
Q 010754 218 VCACAWSPAGS---LLASGSGDSTARIWTIADG---TSNGGAQNGPLNVLVLKHVK--------GRTNEKSKDVTTLDWN 283 (502)
Q Consensus 218 V~~~~~~p~~~---~l~sgs~dg~v~iw~~~~~---~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~v~~l~~s 283 (502)
|.++-|-..|- .+++++. ..|++|+..++ +.......+...+..+.... ..-+-+...|.+++++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~s 120 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCS 120 (356)
T ss_dssp EEEEEEC----CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC-
T ss_pred EeeeeeccCCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEEC
Confidence 55666655443 6778876 78999999887 33333333332222221111 0111234568899999
Q ss_pred CC----CCEEEEEEC--------------------CCeEEEEECC--CceEEEecCccCCeEEEEEec---CCCEEEEEe
Q 010754 284 GE----GTLLATGSY--------------------DGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK---KGDYLLTGS 334 (502)
Q Consensus 284 ~~----g~~l~s~~~--------------------dg~i~iwd~~--~~~~~~~~~~~~~v~~l~~~~---~~~~l~s~~ 334 (502)
|+ ++.+++++. |+.|++|++. ++.+..+..|...+..++|++ ++..|++++
T Consensus 121 pd~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS 200 (356)
T 2w18_A 121 SDDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT 200 (356)
T ss_dssp -----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE
T ss_pred CCccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec
Confidence 99 777777653 8899999973 566777788999999999999 779999999
Q ss_pred cCCeEEEEEcCCCceEEEEeecc---CCeEEEEecCCCEE-------------EEEeCCCeEEEEEcCCCcceEEE----
Q 010754 335 CDKTAIVWDVKTEEWKQQFEFHS---GPTLDVDWRNNVSF-------------ATSSTDNMIYVCKIGENRPIKTF---- 394 (502)
Q Consensus 335 ~d~~i~~wd~~~~~~~~~~~~~~---~~v~~v~~~~~~~~-------------~~~~~d~~i~i~d~~~~~~~~~~---- 394 (502)
.|++|+|||+.++++++++..|. ..+.+++|+|++.+ ++|+.|++|++||..+++.+..+
T Consensus 201 ~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 201 IMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeec
Confidence 99999999999999999998644 35667788887663 56788999999999999887766
Q ss_pred -ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEE-EEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 395 -AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY-TIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 395 -~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~-~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
.+|...+.+..++ +.++|+|+.||+|+|||+.++++++++.+|...+. .++|||||+ .|++|+.|++++
T Consensus 281 p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~-------~LaSGS~D~TIk 351 (356)
T 2w18_A 281 PPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDS-------HLLAGQKDGNIF 351 (356)
T ss_dssp CTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSS-------EEEEECTTSCEE
T ss_pred cCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCC-------EEEEEECCCcEE
Confidence 3676666555554 88999999999999999999999999999987655 589999998 888899999999
Q ss_pred EEEe
Q 010754 473 YWIC 476 (502)
Q Consensus 473 iw~~ 476 (502)
+|+.
T Consensus 352 lWd~ 355 (356)
T 2w18_A 352 VYHY 355 (356)
T ss_dssp EEEE
T ss_pred EecC
Confidence 9974
No 109
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=2.3e-28 Score=235.31 Aligned_cols=222 Identities=21% Similarity=0.337 Sum_probs=182.8
Q ss_pred ceEEeccCCCceEEEEEcC--CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 207 DVTILEGHTSEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p--~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
....+.+|...|++++|+| ++.+|++|+.||+|++||+.++....... .... ......|...|++++|+|
T Consensus 49 ~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~----~~~~----~~~~~~~~~~v~~~~~~~ 120 (351)
T 3f3f_A 49 LSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR----RWNK----LCTLNDSKGSLYSVKFAP 120 (351)
T ss_dssp EEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC----SEEE----EEEECCCSSCEEEEEECC
T ss_pred ecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc----Ccce----eeeecccCCceeEEEEcC
Confidence 4567789999999999999 69999999999999999998765321110 0011 122235678899999999
Q ss_pred C--CCEEEEEECCCeEEEEECCCce-EEE-------------ecCccCCeEEEEEecC---CCEEEEEecCCeEEEEEcC
Q 010754 285 E--GTLLATGSYDGQARIWSTNGDL-KCT-------------LSKHKGPIFSLKWNKK---GDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 285 ~--g~~l~s~~~dg~i~iwd~~~~~-~~~-------------~~~~~~~v~~l~~~~~---~~~l~s~~~d~~i~~wd~~ 345 (502)
+ +.+|++|+.||.|++||+.... ... ...|...+.+++|+|+ +.+|++++.|+.+.+|+..
T Consensus 121 ~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~ 200 (351)
T 3f3f_A 121 AHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGK 200 (351)
T ss_dssp GGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECT
T ss_pred CCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccC
Confidence 9 9999999999999999976321 111 1257889999999997 8999999999999999888
Q ss_pred CCce--EEEEeeccCCeEEEEecCCC-----EEEEEeCCCeEEEEEcCCC------------------------------
Q 010754 346 TEEW--KQQFEFHSGPTLDVDWRNNV-----SFATSSTDNMIYVCKIGEN------------------------------ 388 (502)
Q Consensus 346 ~~~~--~~~~~~~~~~v~~v~~~~~~-----~~~~~~~d~~i~i~d~~~~------------------------------ 388 (502)
.+.. +..+..|...|.+++|++++ .+++++.||.|++||++.+
T Consensus 201 ~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (351)
T 3f3f_A 201 DGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRS 280 (351)
T ss_dssp TSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----------------------------
T ss_pred CCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccccccc
Confidence 7765 66677799999999999884 7999999999999999875
Q ss_pred ----------------cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 389 ----------------RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 389 ----------------~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
..+..+.+|...|++++|+|++++|++|+.||.|+|||+.+++.+..+
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 281 DSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp ----------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 567778899999999999999999999999999999999987655443
No 110
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.1e-28 Score=233.40 Aligned_cols=228 Identities=17% Similarity=0.274 Sum_probs=189.1
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCC---------------------------Cc
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNG---------------------------PL 258 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~---------------------------~~ 258 (502)
..+..+.+|.+.|.+++|+|++++|++++.||.|++||+.+++........ .+
T Consensus 65 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 65 ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEE
T ss_pred hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEE
Confidence 457888999999999999999999999999999999999887654332210 00
Q ss_pred eeEEEeee-------------cCccccCCC--CeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEE
Q 010754 259 NVLVLKHV-------------KGRTNEKSK--DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSL 321 (502)
Q Consensus 259 ~~~~~~~~-------------~~~~~~~~~--~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l 321 (502)
.+..+... ......+.. .+.+++|+|++++|++|+.||.|++||+.. .....+..|...|.++
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~ 224 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDM 224 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEE
Confidence 00000000 000112222 899999999999999999999999999874 6677888899999999
Q ss_pred EEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCCC--------------eEEEEEcC
Q 010754 322 KWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDN--------------MIYVCKIG 386 (502)
Q Consensus 322 ~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d~--------------~i~i~d~~ 386 (502)
+|+|++++|++++.|+.|++||+++++.+..+. +...+..+.|++++ .+++++.++ .+++||..
T Consensus 225 ~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 225 QFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred EECCCCCEEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 999999999999999999999999999888887 77889999997765 477777777 89999999
Q ss_pred CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 387 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 387 ~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
+++++..+.+|...|++++|+|++++|++++.||.|+||++.++....
T Consensus 304 ~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 304 FEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHHTC
T ss_pred CCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccchh
Confidence 999999999999999999999999999999999999999998765443
No 111
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.96 E-value=6.5e-27 Score=232.44 Aligned_cols=247 Identities=24% Similarity=0.467 Sum_probs=199.9
Q ss_pred eCCCceEEeccCC----CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 203 IPNSDVTILEGHT----SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 203 ~~~~~~~~l~~H~----~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
+|..+.++|.+-. --+..|+|+++ ++||+|. |++|+|||+.+++... .+ ....|...|+
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~-------------~~--~~~~~~~~V~ 151 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQ-------------LL--QMEQPGEYIS 151 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEE-------------EE--ECCSTTCCEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEE-------------EE--EecCCCCcEE
Confidence 4444555555421 23678999975 5787775 8999999999876321 11 1234567899
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeec
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFH 356 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~ 356 (502)
+|+|+|+|++|++|+.||.|+|||+. +..+..+.+|...+.++.|+ +..|++|+.|+.+++||.... ..+..+..|
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 99999999999999999999999976 56778889999999998875 579999999999999998764 456778889
Q ss_pred cCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCCCC-EEEE--EeCCCcEEEEECC
Q 010754 357 SGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGS-LLAS--CSDDVTAKIWNMK 428 (502)
Q Consensus 357 ~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~g~-~las--~s~dg~i~iwd~~ 428 (502)
...+..+.|.+. ..+++++.|+.+++|+..+++ .+..+..|...|.+++|+|.+. ++++ |+.|++|+|||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 999999999765 568899999999999998765 4677888999999999999754 5555 4579999999999
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe--ecCceEEEEe
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR--LIPYFLYWIC 476 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las--~~~~~~iw~~ 476 (502)
+++++..+..| ..+.++.|+|++. .+++++ .++.+++|+.
T Consensus 310 t~~~~~~~~~~-~~v~~~~~~~~~~-------~lv~~sg~~d~~I~iwd~ 351 (420)
T 4gga_A 310 SGACLSAVDAH-SQVCSILWSPHYK-------ELISGHGFAQNQLVIWKY 351 (420)
T ss_dssp TTEEEEEEECS-SCEEEEEEETTTT-------EEEEEECTTTCCEEEEET
T ss_pred ccccceeeccc-cceeeeeecCCCC-------eEEEEEecCCCEEEEEEC
Confidence 99999988755 5699999999998 677766 4688999963
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.5e-28 Score=265.80 Aligned_cols=250 Identities=10% Similarity=0.112 Sum_probs=200.3
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.|.||...|..++|+|++++||+|+.|++|++||+.++.... ...+..........+|...|++++|+|+|++|
T Consensus 430 ~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~------~~~~~~~l~~~~~~~h~~~V~svafspdg~~L 503 (902)
T 2oaj_A 430 LLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQD------NASFEVNLSRTLNKAKELAVDKISFAAETLEL 503 (902)
T ss_dssp SCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTT------TBCEEEEHHHHTTCSSSCCEEEEEEETTTTEE
T ss_pred cccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccC------CceEEeechhhcCCCCCCceeEEEecCCCCeE
Confidence 477888888889999999999999999999999998874211 01111100000112677899999999999999
Q ss_pred EEEECCCeEEEEECCCc----------------------------------------------eEEEecCccCCeEEEEE
Q 010754 290 ATGSYDGQARIWSTNGD----------------------------------------------LKCTLSKHKGPIFSLKW 323 (502)
Q Consensus 290 ~s~~~dg~i~iwd~~~~----------------------------------------------~~~~~~~~~~~v~~l~~ 323 (502)
|+|+.||+|+||++.+. +...+.+|.+.|++++|
T Consensus 504 Asgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svaf 583 (902)
T 2oaj_A 504 AVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINN 583 (902)
T ss_dssp EEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEE
T ss_pred EEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEe
Confidence 99999999999997532 25677889999999999
Q ss_pred ecCCCEEEEEecCCeEEEEEcCCCceEEE-----Ee-eccCCeEEEEec-----CCC----EEEEEeCCCeEEEEEc---
Q 010754 324 NKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-----FE-FHSGPTLDVDWR-----NNV----SFATSSTDNMIYVCKI--- 385 (502)
Q Consensus 324 ~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-----~~-~~~~~v~~v~~~-----~~~----~~~~~~~d~~i~i~d~--- 385 (502)
+|+| +|++|+.|++|++||++++..+.. +. +|...|.+++|+ +++ .+++++.|++|++||+
T Consensus 584 SpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~ 662 (902)
T 2oaj_A 584 SNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPA 662 (902)
T ss_dssp CBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEEC
T ss_pred cCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecC
Confidence 9999 999999999999999988776542 22 678889999999 874 6999999999999999
Q ss_pred CCCcceEEEecCC-----CcEEEEE-Ec----------------------CCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 386 GENRPIKTFAGHQ-----GEVNCVK-WD----------------------PTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 386 ~~~~~~~~~~~h~-----~~i~~l~-~s----------------------p~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
.+++.+..+.+|. +.|..+. |+ +++.+|+++ +..||||++.++++.+...
T Consensus 663 ~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ir~~~~~~~k~~~k~~ 740 (902)
T 2oaj_A 663 SGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDDIRLITLGKSKSTHKGF 740 (902)
T ss_dssp GGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSEEEEECTTCCCEEEEEC
T ss_pred CCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccceEEEeCccccceeeEc
Confidence 7888888887774 6777776 65 455555554 6789999999999998887
Q ss_pred cCCCcEEEE---E------EccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 438 EHSKEIYTI---R------WSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 438 ~h~~~i~~v---~------~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.|...+.++ . |+++|. .|++.+.++.+++|.
T Consensus 741 ~~~~~~~~v~~~~~~~~~~~~~~~~-------~l~~~~~~g~i~~~s 780 (902)
T 2oaj_A 741 KYPLAATGLSYISTVEKNNDRKNLT-------VIITLEINGHLRVFT 780 (902)
T ss_dssp SSCEEEEEEEEEEEECSSSCEEEEE-------EEEEEETTSEEEEEE
T ss_pred ccceeeeEEEEEEeccccccccCce-------EEEEEeCCCcEEEEE
Confidence 777666776 5 677776 788888899999996
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-27 Score=233.32 Aligned_cols=201 Identities=24% Similarity=0.393 Sum_probs=178.2
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC---CceEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEc
Q 010754 270 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN---GDLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~ 344 (502)
..+|...|++++|+|++++|++|+.||.|+||++. ......+..|..+|.+++|+++ +++|++++.||.|++||+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~ 86 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 86 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEE
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEc
Confidence 45678899999999999999999999999999985 3455678899999999999977 899999999999999999
Q ss_pred CCCc--eEEEEeeccCCeEEEEecCC---CEEEEEeCCCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcC---------
Q 010754 345 KTEE--WKQQFEFHSGPTLDVDWRNN---VSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDP--------- 408 (502)
Q Consensus 345 ~~~~--~~~~~~~~~~~v~~v~~~~~---~~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp--------- 408 (502)
.+++ .+..+..|...+.+++|+++ ..+++++.|+.|++||+.... ....+.+|...|++++|+|
T Consensus 87 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 166 (379)
T 3jrp_A 87 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 166 (379)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC-------
T ss_pred CCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccccccc
Confidence 9987 67777789999999999875 579999999999999998873 4556778999999999999
Q ss_pred ----CCCEEEEEeCCCcEEEEECCCCe----eEEEeccCCCcEEEEEEccC---CCCCCCCCccEEEEeecCceEEEEee
Q 010754 409 ----TGSLLASCSDDVTAKIWNMKQDK----YVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 409 ----~g~~las~s~dg~i~iwd~~~~~----~~~~~~~h~~~i~~v~~sp~---g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++.+|++|+.||.|++||++++. ++..+.+|..+|++++|+|+ +. .+++++.|+.+++|...
T Consensus 167 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-------~l~s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 167 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-------YLASVSQDRTCIIWTQD 239 (379)
T ss_dssp ---CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-------EEEEEETTSCEEEEEES
T ss_pred cCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-------eEEEEeCCCEEEEEeCC
Confidence 69999999999999999997754 55677899999999999999 55 78888889999999754
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=9.8e-28 Score=239.11 Aligned_cols=215 Identities=25% Similarity=0.459 Sum_probs=183.1
Q ss_pred CceEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
..+..+.+|...|++++|+|++. +|++|+.||+|++|++.++..... . .........|...|.+++|+|
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~-------~---~~~~~~~~~h~~~v~~v~~~p 241 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHR-------V---IDAKNIFTGHTAVVEDVAWHL 241 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGG-------E---EECSEEECCCSSCEEEEEECS
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCc-------e---eccceeecCCCCCEeeeEEeC
Confidence 45678899999999999999987 999999999999999987432110 0 001122335678899999999
Q ss_pred -CCCEEEEEECCCeEEEEECCC----ceEEEecCccCCeEEEEEecCCC-EEEEEecCCeEEEEEcCC-CceEEEEeecc
Q 010754 285 -EGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKT-EEWKQQFEFHS 357 (502)
Q Consensus 285 -~g~~l~s~~~dg~i~iwd~~~----~~~~~~~~~~~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~ 357 (502)
++.+|++++.||.|++||++. .....+..|...|.+++|+|++. .|++|+.||.|++||+++ +..+..+..|.
T Consensus 242 ~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~ 321 (430)
T 2xyi_A 242 LHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHK 321 (430)
T ss_dssp SCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCC
Confidence 778999999999999999874 35667778999999999999887 688999999999999998 56788888999
Q ss_pred CCeEEEEecCCC--EEEEEeCCCeEEEEEcCC--------------CcceEEEecCCCcEEEEEEcCCCC-EEEEEeCCC
Q 010754 358 GPTLDVDWRNNV--SFATSSTDNMIYVCKIGE--------------NRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDV 420 (502)
Q Consensus 358 ~~v~~v~~~~~~--~~~~~~~d~~i~i~d~~~--------------~~~~~~~~~h~~~i~~l~~sp~g~-~las~s~dg 420 (502)
..|.++.|++++ .|++++.|+.|++||+.. ...+..+.+|...|++++|+|++. +|++++.||
T Consensus 322 ~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg 401 (430)
T 2xyi_A 322 DEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN 401 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS
T ss_pred CCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC
Confidence 999999998865 589999999999999987 356677888999999999999999 999999999
Q ss_pred cEEEEECCCC
Q 010754 421 TAKIWNMKQD 430 (502)
Q Consensus 421 ~i~iwd~~~~ 430 (502)
.|+||++...
T Consensus 402 ~i~iw~~~~~ 411 (430)
T 2xyi_A 402 IMQVWQMAEN 411 (430)
T ss_dssp EEEEEEECHH
T ss_pred CEEEeEcccc
Confidence 9999998653
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.6e-28 Score=235.71 Aligned_cols=240 Identities=10% Similarity=0.044 Sum_probs=181.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC--CCCEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~--~g~~l~s~ 292 (502)
...|.++.|+|+ +++|+.|++|++|+.............. . .......|...|.+++|+| +++++++|
T Consensus 76 ~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~----~---~~~~~~~~~~~v~~~~~~~~~~~~~l~s~ 145 (343)
T 3lrv_A 76 TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK----V---LREIEVDSANEIIYMYGHNEVNTEYFIWA 145 (343)
T ss_dssp EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC----E---EEEEECCCSSCEEEEECCC---CCEEEEE
T ss_pred cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc----e---eEEeecCCCCCEEEEEcCCCCCCCEEEEE
Confidence 567888899988 9999999999999876432111000000 0 1112234557899999999 99999999
Q ss_pred ECCCeEEEEECCCceE-EEe-cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceE-EEEee-ccCCeEEEEecCC
Q 010754 293 SYDGQARIWSTNGDLK-CTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-QQFEF-HSGPTLDVDWRNN 368 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~-~~~-~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~-~~~~~-~~~~v~~v~~~~~ 368 (502)
+.||.|++||++.... ... ..|...|.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |..+|.+++|+++
T Consensus 146 s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~ 225 (343)
T 3lrv_A 146 DNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADN 225 (343)
T ss_dssp ETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTT
T ss_pred eCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCC
Confidence 9999999999875443 333 345668999999999999999999999999999999887 78888 9999999999887
Q ss_pred CE-EEEEeCCCeEEEEEcCCCcceEEEec---CCCcEE--EEEEcCCCCEEEEEeC-CCcEEEEECCCCeeEEEeccCCC
Q 010754 369 VS-FATSSTDNMIYVCKIGENRPIKTFAG---HQGEVN--CVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 369 ~~-~~~~~~d~~i~i~d~~~~~~~~~~~~---h~~~i~--~l~~sp~g~~las~s~-dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
+. +++++ ++.|++||+++.+.+..+.. |...+. +++|+|+|++|++++. |+.|+||++.+....... .
T Consensus 226 g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~----~ 300 (343)
T 3lrv_A 226 GYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTK----D 300 (343)
T ss_dssp SSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEE----E
T ss_pred CCEEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEe----c
Confidence 65 56666 66999999999877655443 334444 6999999999999998 999999999765433332 5
Q ss_pred cEEEEEEcc---CCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 EIYTIRWSP---TGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 ~i~~v~~sp---~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++..++|+| ++. .+++++.++.+.++..
T Consensus 301 ~~~~~~~~~~~~~~~-------~l~~~~~d~~~~~~~~ 331 (343)
T 3lrv_A 301 EESALCLQSDTADFT-------DMDVVCGDGGIAAILK 331 (343)
T ss_dssp EEEECCC----CCCC-------EEEEEEETTEEEEEEE
T ss_pred CceeEecCccccccc-------eeEEEecCCceEEEEe
Confidence 688899998 555 7788888898888763
No 116
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=2.4e-28 Score=243.88 Aligned_cols=197 Identities=19% Similarity=0.244 Sum_probs=165.3
Q ss_pred cCCCCeEEEEECC-CCCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCC
Q 010754 272 EKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 272 ~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~ 346 (502)
+|...|++|+|+| ++++||+|+.||.|+|||+... ....+.+|.+.|++|+|+| ++++|++|+.||+|++||+++
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~ 196 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKG 196 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTS
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccC
Confidence 4567799999999 5679999999999999997642 3445678999999999998 689999999999999999987
Q ss_pred CceEEEEeec--cCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEeCCCcE
Q 010754 347 EEWKQQFEFH--SGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTA 422 (502)
Q Consensus 347 ~~~~~~~~~~--~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s~dg~i 422 (502)
+........+ ...+.+++|+++ ..+++|+.||.|++||++. +.+..+.+|...|++++|+|++. +|++|+.|+.|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v 275 (435)
T 4e54_B 197 NILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV 275 (435)
T ss_dssp CEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC
T ss_pred CceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccceEEeeeecCCCceEEEEecCccee
Confidence 6544333332 335678889765 5688999999999999864 56778889999999999999976 78899999999
Q ss_pred EEEECCCCeeEEEe---ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 423 KIWNMKQDKYVHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 423 ~iwd~~~~~~~~~~---~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+|||+++.+....+ .+|..+|++++|+|+|. .|++++.|+.+++|..
T Consensus 276 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-------~l~s~~~D~~i~iwd~ 325 (435)
T 4e54_B 276 KIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-------RLLTTDQKSEIRVYSA 325 (435)
T ss_dssp CEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-------EEEEEESSSCEEEEES
T ss_pred eEEecccccccceEEEeeeccccccceeECCCCC-------eeEEEcCCCEEEEEEC
Confidence 99999887654433 47999999999999998 8889999999999974
No 117
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=3.7e-26 Score=227.76 Aligned_cols=240 Identities=12% Similarity=0.078 Sum_probs=197.4
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.+.+|.+.|.+++|+|++.++++++.|+.|++||+.+++.. ..+ ..+...+.+++|+|+++.+
T Consensus 164 ~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~-------------~~~----~~~~~~~~~~~~~~~~~~l 226 (433)
T 3bws_A 164 KYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYK-------------ATV----DLTGKWSKILLYDPIRDLV 226 (433)
T ss_dssp HHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEE-------------EEE----ECSSSSEEEEEEETTTTEE
T ss_pred cccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEE-------------EEE----cCCCCCeeEEEEcCCCCEE
Confidence 34689999999999999999999999999999999876532 111 1345679999999999988
Q ss_pred EEEE-CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe--------cCCeEEEEEcCCCceEEEEeeccCCe
Q 010754 290 ATGS-YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS--------CDKTAIVWDVKTEEWKQQFEFHSGPT 360 (502)
Q Consensus 290 ~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~--------~d~~i~~wd~~~~~~~~~~~~~~~~v 360 (502)
++++ .++.|++||+..........+...+.+++|+|+++++++++ .|+.|++||+.+++.+..+ .+...+
T Consensus 227 ~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~ 305 (433)
T 3bws_A 227 YCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNK 305 (433)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECE
T ss_pred EEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCc
Confidence 6555 78999999987544443334455699999999999999888 4889999999999877765 355588
Q ss_pred EEEEecCCC--EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC---------------CCcEE
Q 010754 361 LDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD---------------DVTAK 423 (502)
Q Consensus 361 ~~v~~~~~~--~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~---------------dg~i~ 423 (502)
..++|++++ .+++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++. ||.|+
T Consensus 306 ~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 306 RHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVY 384 (433)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEE
T ss_pred ceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEE
Confidence 899998876 35667899999999999998888886 7788999999999999888876 57999
Q ss_pred EEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee-cCceEEEEe
Q 010754 424 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL-IPYFLYWIC 476 (502)
Q Consensus 424 iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~~ 476 (502)
+||+.+++.+..+.. ...+.+++|+|+|. .+++++. ++.+++|..
T Consensus 385 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~-------~l~~~~~~d~~i~v~~~ 430 (433)
T 3bws_A 385 VIDTTTDTVKEFWEA-GNQPTGLDVSPDNR-------YLVISDFLDHQIRVYRR 430 (433)
T ss_dssp EEETTTTEEEEEEEC-SSSEEEEEECTTSC-------EEEEEETTTTEEEEEEE
T ss_pred EEECCCCcEEEEecC-CCCCceEEEcCCCC-------EEEEEECCCCeEEEEEe
Confidence 999999999988875 45799999999998 6666654 888999975
No 118
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.3e-27 Score=221.10 Aligned_cols=211 Identities=15% Similarity=0.104 Sum_probs=152.1
Q ss_pred CCCceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCC---CCCCceeEEEe---eecCccccCCCCeEEEEEC
Q 010754 214 HTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGA---QNGPLNVLVLK---HVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 214 H~~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~~v~~l~~s 283 (502)
|...|.+++|+|+ +.++++++.+ +++|++.+++.+... ....+....+. ........|...++.++|+
T Consensus 110 ~~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs 187 (356)
T 2w18_A 110 EIREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFA 187 (356)
T ss_dssp SEEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEE
T ss_pred cccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEee
Confidence 3456778888888 7888887743 666777665543331 12222222220 1112233567788899999
Q ss_pred C---CCCEEEEEECCCeEEEEECC-CceEEEecCcc---CCeEEEEEecCCCEE------------EEEecCCeEEEEEc
Q 010754 284 G---EGTLLATGSYDGQARIWSTN-GDLKCTLSKHK---GPIFSLKWNKKGDYL------------LTGSCDKTAIVWDV 344 (502)
Q Consensus 284 ~---~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~---~~v~~l~~~~~~~~l------------~s~~~d~~i~~wd~ 344 (502)
+ ++.+|++|+.|++|+|||+. ++.+.++.+|. ..+.+++|+|+|.++ ++|+.|++|++||.
T Consensus 188 ~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~ 267 (356)
T 2w18_A 188 EVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINP 267 (356)
T ss_dssp EEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEET
T ss_pred ccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEEC
Confidence 8 77999999999999999987 56777777543 467788999999876 56788999999999
Q ss_pred CCCceEEEEe-----eccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEE-EEEEcCCCCEEEEEeC
Q 010754 345 KTEEWKQQFE-----FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVN-CVKWDPTGSLLASCSD 418 (502)
Q Consensus 345 ~~~~~~~~~~-----~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~-~l~~sp~g~~las~s~ 418 (502)
.+++.+..+. +|...+.+..+. +..+++++.|++|+|||+.+++.+.++.+|...+. +++|+|+|++|++|+.
T Consensus 268 ~tgk~l~v~~~~~p~Gh~~~~lsg~~s-g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 268 KTTLSVGVMLYCLPPGQAGRFLEGDVK-DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTTEEEEEEEECCCTTCCCCEEEEEEE-TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCCEEEEEEEeeccCCCcceeEccccC-CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 9998877652 444445555544 55688999999999999999999999999987655 5899999999999999
Q ss_pred CCcEEEEEC
Q 010754 419 DVTAKIWNM 427 (502)
Q Consensus 419 dg~i~iwd~ 427 (502)
|++|+|||+
T Consensus 347 D~TIklWd~ 355 (356)
T 2w18_A 347 DGNIFVYHY 355 (356)
T ss_dssp TSCEEEEEE
T ss_pred CCcEEEecC
Confidence 999999985
No 119
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.6e-25 Score=219.90 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=192.7
Q ss_pred eEEeccCCCceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
+..+.+|. .+.+++|+|++++| ++++.|++|++||+.+++... .+. +...+.+++|+|++
T Consensus 25 ~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~-------------~~~-----~~~~v~~~~~spdg 85 (391)
T 1l0q_A 25 TATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA-------------TVP-----AGSSPQGVAVSPDG 85 (391)
T ss_dssp EEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE-------------EEE-----CSSSEEEEEECTTS
T ss_pred EEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEE-------------EEE-----CCCCccceEECCCC
Confidence 45566665 48999999999876 677799999999998765321 111 12379999999999
Q ss_pred CEEEEEE-CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 287 TLLATGS-YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 287 ~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
++|++++ .++.|++||+..........+...+.+++|+|++++| ++++.++.|++||+.+++.+..+..+ ..+..+.
T Consensus 86 ~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~ 164 (391)
T 1l0q_A 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-RSPKGIA 164 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-SSEEEEE
T ss_pred CEEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-CCcceEE
Confidence 9886555 6699999998865444444455678999999999977 67888999999999999988887765 4568999
Q ss_pred ecCCCE-E-EEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe---CCCcEEEEECCCCeeEEEeccC
Q 010754 365 WRNNVS-F-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS---DDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 365 ~~~~~~-~-~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s---~dg~i~iwd~~~~~~~~~~~~h 439 (502)
|++++. + ++++.++.|++||+.+++.+..+. +...+.+++|+|+|++|++++ .++.|++||+.+++.+..+..|
T Consensus 165 ~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~ 243 (391)
T 1l0q_A 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVG 243 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECC
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecC
Confidence 988763 4 567788999999999998887776 566899999999999999888 6899999999999999888876
Q ss_pred CCcEEEEEEccCCCCCCCCCccEE-EEeecCceEEEEe
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLI-LARLIPYFLYWIC 476 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~-las~~~~~~iw~~ 476 (502)
. .+.+++|+|+|. .++ .++.++.+++|+.
T Consensus 244 ~-~~~~~~~s~dg~-------~l~~s~~~d~~v~v~d~ 273 (391)
T 1l0q_A 244 P-DPAGIAVTPDGK-------KVYVALSFXNTVSVIDT 273 (391)
T ss_dssp S-SEEEEEECTTSS-------EEEEEETTTTEEEEEET
T ss_pred C-CccEEEEccCCC-------EEEEEcCCCCEEEEEEC
Confidence 5 479999999997 553 3456788999974
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=6.3e-25 Score=208.98 Aligned_cols=247 Identities=23% Similarity=0.438 Sum_probs=195.6
Q ss_pred eCCCceEEecc--CCC--ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 203 IPNSDVTILEG--HTS--EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 203 ~~~~~~~~l~~--H~~--~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
+|..+.++|.+ ..+ -+.+|+||+++ +||+|. |++|+|||+.+++... .+ ....|...|+
T Consensus 9 ~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg~-D~tV~iWd~~tg~~~~-------------~~--~~~~~~~~V~ 71 (318)
T 4ggc_A 9 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVAL-DNSVYLWSASSGDILQ-------------LL--QMEQPGEYIS 71 (318)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEEE-TTEEEEEETTTCCEEE-------------EE--ECCSTTCCEE
T ss_pred cCCCCCEEeeCCCCcccccceEEEECCCC-EEEEEe-CCEEEEEECCCCCEEE-------------EE--EecCCCCeEE
Confidence 44455556643 222 25789999876 777764 8999999999876421 11 1234667899
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeec
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFH 356 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~ 356 (502)
+++|+|++++|++|+.||.|++|+++ ++....+.+|...+.++.+ ++..+++++.++.+++|+.... ..+..+..|
T Consensus 72 ~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 72 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 99999999999999999999999987 5667788899988877655 5679999999999999998765 456677889
Q ss_pred cCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCc----ceEEEecCCCcEEEEEEcCCCCE---EEEEeCCCcEEEEECC
Q 010754 357 SGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGSL---LASCSDDVTAKIWNMK 428 (502)
Q Consensus 357 ~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~----~~~~~~~h~~~i~~l~~sp~g~~---las~s~dg~i~iwd~~ 428 (502)
...+..+.+.+. ..+++++.|+.|++||+.+++ .......|.+.|.++.++|++.. +++++.++.|++||..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 999999999664 568899999999999998765 34566678889999999997653 3466778999999999
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe--ecCceEEEEe
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR--LIPYFLYWIC 476 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las--~~~~~~iw~~ 476 (502)
......... +...+..+.|+|++. .+++++ .++.+++|+.
T Consensus 230 ~~~~~~~~~-~~~~v~~~~~~~~~~-------~~~~~sg~~d~~i~iwd~ 271 (318)
T 4ggc_A 230 SGACLSAVD-AHSQVCSILWSPHYK-------ELISGHGFAQNQLVIWKY 271 (318)
T ss_dssp TCCEEEEEE-CSSCEEEEEEETTTT-------EEEEEECTTTCCEEEEET
T ss_pred ccccccccc-ceeeeeeeeeccccc-------ceEEEEEcCCCEEEEEEC
Confidence 888776654 677899999999998 667766 4688999964
No 121
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=7.3e-27 Score=230.40 Aligned_cols=199 Identities=20% Similarity=0.378 Sum_probs=172.9
Q ss_pred ccCCCCeEEEEECC-CCCEEEEEECCCeEEEEECCCceE-EEe-------------cCccCCeEEEEEec-CCCEEEEEe
Q 010754 271 NEKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLK-CTL-------------SKHKGPIFSLKWNK-KGDYLLTGS 334 (502)
Q Consensus 271 ~~~~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~~-~~~-------------~~~~~~v~~l~~~~-~~~~l~s~~ 334 (502)
..|...|++++|+| ++++|++|+.||.|++||+..... ..+ ..|...|.+++|+| ++.+|++++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 34788999999999 999999999999999999874321 111 25999999999999 778999999
Q ss_pred cCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC----CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCC
Q 010754 335 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN----VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG 410 (502)
Q Consensus 335 ~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~----~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g 410 (502)
.||.|++||+.+++....+. +...+..+.|.+. ..+++++.++.|++||+.++..+..+.+|...|++++|+|++
T Consensus 120 ~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~ 198 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRY 198 (408)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSC
T ss_pred CCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCC
Confidence 99999999999998888776 6778899998653 369999999999999999999999999999999999999999
Q ss_pred C-EEEEEeCCCcEEEEECCCCe-eEEEe---------------ccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 411 S-LLASCSDDVTAKIWNMKQDK-YVHDL---------------REHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 411 ~-~las~s~dg~i~iwd~~~~~-~~~~~---------------~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
. +|++|+.||.|++||++++. ++..+ ..|...|++++|+|+|. .+++++.++.+++
T Consensus 199 ~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-------~l~~~~~dg~i~v 271 (408)
T 4a11_B 199 DYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL-------HLLTVGTDNRMRL 271 (408)
T ss_dssp TTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS-------EEEEEETTSCEEE
T ss_pred CcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC-------EEEEecCCCeEEE
Confidence 8 59999999999999998765 34444 57889999999999998 7888888999999
Q ss_pred EEee
Q 010754 474 WICS 477 (502)
Q Consensus 474 w~~~ 477 (502)
|...
T Consensus 272 wd~~ 275 (408)
T 4a11_B 272 WNSS 275 (408)
T ss_dssp EETT
T ss_pred EECC
Confidence 9753
No 122
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.9e-26 Score=244.23 Aligned_cols=201 Identities=24% Similarity=0.392 Sum_probs=178.3
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC---CceEEEecCccCCeEEEEEecC--CCEEEEEecCCeEEEEEc
Q 010754 270 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN---GDLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~v~~l~~~~~--~~~l~s~~~d~~i~~wd~ 344 (502)
..+|...|++++|+|+|++|++|+.||.|+|||+. ......+.+|.++|.+++|+|+ +++|++|+.||.|++||+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~ 84 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKE 84 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEE
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEEC
Confidence 35678899999999999999999999999999975 3456678899999999999988 899999999999999999
Q ss_pred CCCc--eEEEEeeccCCeEEEEecCC---CEEEEEeCCCeEEEEEcCCC--cceEEEecCCCcEEEEEEcC---------
Q 010754 345 KTEE--WKQQFEFHSGPTLDVDWRNN---VSFATSSTDNMIYVCKIGEN--RPIKTFAGHQGEVNCVKWDP--------- 408 (502)
Q Consensus 345 ~~~~--~~~~~~~~~~~v~~v~~~~~---~~~~~~~~d~~i~i~d~~~~--~~~~~~~~h~~~i~~l~~sp--------- 408 (502)
.+++ ....+..|...|.++.|+++ ..+++++.||.|++||++++ .....+.+|...|++++|+|
T Consensus 85 ~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~ 164 (753)
T 3jro_A 85 ENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEH 164 (753)
T ss_dssp ETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC-------
T ss_pred CCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCccccccccc
Confidence 9987 67777889999999999874 67999999999999999887 34567788999999999999
Q ss_pred ----CCCEEEEEeCCCcEEEEECCCC----eeEEEeccCCCcEEEEEEccC---CCCCCCCCccEEEEeecCceEEEEee
Q 010754 409 ----TGSLLASCSDDVTAKIWNMKQD----KYVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 409 ----~g~~las~s~dg~i~iwd~~~~----~~~~~~~~h~~~i~~v~~sp~---g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
++.+|++|+.||.|++||++++ .++..+.+|..+|++++|+|+ |. .+++++.|+.+++|+..
T Consensus 165 ~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~-------~l~s~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 165 NGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-------YLASVSQDRTCIIWTQD 237 (753)
T ss_dssp --CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-------EEEEEESSSCEEEEEES
T ss_pred ccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCC-------EEEEEecCCEEEEecCC
Confidence 5899999999999999999877 667788899999999999999 65 78888889999999754
No 123
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.95 E-value=8.6e-27 Score=229.36 Aligned_cols=201 Identities=16% Similarity=0.152 Sum_probs=148.2
Q ss_pred EEeccCCCceEEEEEcC--------CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 209 TILEGHTSEVCACAWSP--------AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p--------~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
..+.||.+.|++++|+| ++++||+|+.|++|+|||+.++... .....|...|.++
T Consensus 130 ~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~-----------------~~~~~~~~~v~~v 192 (393)
T 4gq1_A 130 GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI-----------------LAGYPLSSPGISV 192 (393)
T ss_dssp CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE-----------------EEEEECSSCEEEE
T ss_pred cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee-----------------eeecCCCCCcEEE
Confidence 45789999999999998 7899999999999999999765421 1122356789999
Q ss_pred EECCCC-CEEEEEECCCeEEEEECCCceE--------------------------EEecCccCCeEEEEEe-cCCCEEEE
Q 010754 281 DWNGEG-TLLATGSYDGQARIWSTNGDLK--------------------------CTLSKHKGPIFSLKWN-KKGDYLLT 332 (502)
Q Consensus 281 ~~s~~g-~~l~s~~~dg~i~iwd~~~~~~--------------------------~~~~~~~~~v~~l~~~-~~~~~l~s 332 (502)
+|+|++ .+|++|+.||.|++||+..... ....+|...|.++.|+ |+++.|++
T Consensus 193 ~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s 272 (393)
T 4gq1_A 193 QFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILA 272 (393)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEE
T ss_pred EECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEE
Confidence 999987 4899999999999999764211 1123577889999997 79999999
Q ss_pred EecCCeEEEEEcCCCceEEEEeeccCCeEEEEec--------------------CCCE-EEEEeCCCeEEEEEcCCCcce
Q 010754 333 GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--------------------NNVS-FATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 333 ~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~--------------------~~~~-~~~~~~d~~i~i~d~~~~~~~ 391 (502)
++.|+++++||+.++.....+..+...+..+.+. .++. +++|+.||.|++||+.++..+
T Consensus 273 ~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~ 352 (393)
T 4gq1_A 273 MCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSN 352 (393)
T ss_dssp ECTTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCC
T ss_pred EeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEE
Confidence 9999999999998887766665554443333222 1333 456778999999999999999
Q ss_pred EEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 392 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 392 ~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
..+.+|...|++++|+|+|++||+++.+| +.+|.+
T Consensus 353 ~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 353 SIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred EEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 98889999999999999999999999877 666654
No 124
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.94 E-value=4.7e-25 Score=214.10 Aligned_cols=199 Identities=22% Similarity=0.382 Sum_probs=168.1
Q ss_pred cccCCCCeEEEEECCC---CCEEEEEECCCeEEEEECCC--ceE-EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEE
Q 010754 270 TNEKSKDVTTLDWNGE---GTLLATGSYDGQARIWSTNG--DLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 343 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~---g~~l~s~~~dg~i~iwd~~~--~~~-~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd 343 (502)
..+|...|++++|+|+ |++|++|+.||.|++||+.. ... ..+..|...|.+++|+|++++|++++.||.|++||
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 3467889999999999 69999999999999999873 333 67888999999999999999999999999999999
Q ss_pred cCCCceEEEEeeccCCeEEEEe--cCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCC----------------------
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDW--RNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQ---------------------- 398 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~--~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~---------------------- 398 (502)
+.+++.+. +..|...|.++.| .+++ .+++++.|+.|++||+++++++..+..+.
T Consensus 115 ~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 193 (368)
T 3mmy_A 115 LSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLI 193 (368)
T ss_dssp TTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEE
T ss_pred cCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEE
Confidence 99988766 5669999999999 6665 48899999999999999998877776543
Q ss_pred -------------------CcEEEEEEcCCCCE----EEEEeCCCcEEEEECCCC---eeEEEeccCCC-----------
Q 010754 399 -------------------GEVNCVKWDPTGSL----LASCSDDVTAKIWNMKQD---KYVHDLREHSK----------- 441 (502)
Q Consensus 399 -------------------~~i~~l~~sp~g~~----las~s~dg~i~iwd~~~~---~~~~~~~~h~~----------- 441 (502)
..+.++.+.++... +++|+.||.|++||++.. ..+..+.+|..
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (368)
T 3mmy_A 194 VYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDI 273 (368)
T ss_dssp EEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEE
T ss_pred EEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccc
Confidence 23344455444433 999999999999999887 55677777776
Q ss_pred -cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 -EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 -~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+|++++|+|+|. .+++++.|+.+++|+.
T Consensus 274 ~~v~~~~~sp~~~-------~l~s~~~dg~i~iwd~ 302 (368)
T 3mmy_A 274 YAVNGIAFHPVHG-------TLATVGSDGRFSFWDK 302 (368)
T ss_dssp CCEEEEEECTTTC-------CEEEEETTSCEEEEET
T ss_pred cceEEEEEecCCC-------EEEEEccCCeEEEEEC
Confidence 799999999998 7888999999999974
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.5e-24 Score=216.15 Aligned_cols=245 Identities=12% Similarity=0.053 Sum_probs=196.0
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+..+ ..+.+++|+|++.++++++.|+.|++||+.+++.... ........|...|.+++|++++++
T Consensus 117 ~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 117 SRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRL------------SPPEKYKKKLGFVETISIPEHNEL 183 (433)
T ss_dssp EEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEE------------CCCHHHHTTCCEEEEEEEGGGTEE
T ss_pred EEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeee------------cCcccccccCCceeEEEEcCCCEE
Confidence 344444 4466999999878888888899999999988753210 011123456778999999999999
Q ss_pred EEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 289 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
+++++.|+.|++||++. .....+..|...+.+++|+|++++++++ +.|+.|++||+++++.+..+..+ ..+.+++|+
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~ 262 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLS 262 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEEC
T ss_pred EEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEc
Confidence 99999999999999875 5666777889999999999999988654 47999999999999888777654 458999998
Q ss_pred CCC-EEEEEe--------CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEECCCCeeEEEe
Q 010754 367 NNV-SFATSS--------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 367 ~~~-~~~~~~--------~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~-las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
+++ .+++++ .|+.|++||+.+++.+..+. |...+.+++|+|+++. +++++.|+.|++||+.+++.+..+
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe
Confidence 876 566666 48899999999988777663 6668999999999975 466788999999999999988887
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCccEEEEee---------------cCceEEEEe
Q 010754 437 REHSKEIYTIRWSPTGSGTNNPNQQLILARL---------------IPYFLYWIC 476 (502)
Q Consensus 437 ~~h~~~i~~v~~sp~g~~~~~~~~~l~las~---------------~~~~~iw~~ 476 (502)
. +...+.+++|+|+|. .+++++. |+.+.+|+.
T Consensus 342 ~-~~~~~~~~~~s~dg~-------~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~ 388 (433)
T 3bws_A 342 P-VFDKPNTIALSPDGK-------YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDT 388 (433)
T ss_dssp E-CSSSEEEEEECTTSS-------EEEEEECCCCCTTTCTTSCCSSCCEEEEEET
T ss_pred c-CCCCCCeEEEcCCCC-------EEEEEecCCCccccccccccccceEEEEEEC
Confidence 6 677899999999997 5555555 347888863
No 126
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.94 E-value=4.8e-25 Score=213.78 Aligned_cols=228 Identities=15% Similarity=0.164 Sum_probs=175.2
Q ss_pred CceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 216 SEVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
..+..++|.++++.+ ++|+.|++|++||+.+++.+. .+ .+...|.+++|+++. ++++ .
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~-------------~~-----~~~~~v~~v~~~~~~--~~~~-~ 117 (355)
T 3vu4_A 59 RHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVS-------------RI-----KVDAPVKDLFLSREF--IVVS-Y 117 (355)
T ss_dssp SCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEE-------------EE-----ECSSCEEEEEECSSE--EEEE-E
T ss_pred CCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEE-------------EE-----ECCCceEEEEEcCCE--EEEE-E
Confidence 468889999988877 567788999999998875321 11 124579999999864 4444 3
Q ss_pred CCeEEEEECCCc--eEEEecCccCCeEEEEEecCCCEEEE--EecCCeEEEEEcCCCc----------------eEEEEe
Q 010754 295 DGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLT--GSCDKTAIVWDVKTEE----------------WKQQFE 354 (502)
Q Consensus 295 dg~i~iwd~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~s--~~~d~~i~~wd~~~~~----------------~~~~~~ 354 (502)
++.|++||+... .+..+.. +...+++++ .++++ |+.||.|++||+.++. .+..+.
T Consensus 118 ~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~ 192 (355)
T 3vu4_A 118 GDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK 192 (355)
T ss_dssp TTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC
T ss_pred cCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE
Confidence 789999998754 3333322 445566676 56665 5889999999998865 267888
Q ss_pred eccCCeEEEEecCCC-EEEEEeCCCe-EEEEEcCCCcceEEEe-c-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 355 FHSGPTLDVDWRNNV-SFATSSTDNM-IYVCKIGENRPIKTFA-G-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~-~~~~~~~d~~-i~i~d~~~~~~~~~~~-~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
.|...|.+++|++++ .+++++.|++ |++||+.+++.+.++. + |...|++++|+|+|++|++|+.|++|+|||+..+
T Consensus 193 ~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 193 AHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred ccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 999999999998865 5899999998 9999999999999998 5 9999999999999999999999999999999765
Q ss_pred eeE--EEec---------------------cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 431 KYV--HDLR---------------------EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 431 ~~~--~~~~---------------------~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
... ..+. .+..+...++|+|+|. .+++++.|+.+.+|..
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-------~l~~~~~dg~~~~~~~ 334 (355)
T 3vu4_A 273 QDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-------LVVVWPHTRMIETFKV 334 (355)
T ss_dssp SCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-------EEEEETTTTEEEEEEE
T ss_pred CCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-------EEEEEeCCCeEEEEEE
Confidence 311 1111 1122346799999998 7788888888888864
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=6.6e-24 Score=210.11 Aligned_cols=228 Identities=15% Similarity=0.170 Sum_probs=183.5
Q ss_pred CCCceEEeccCCCceEEEEEcCCCCeEEEEeCCC---cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE
Q 010754 204 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDS---TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 280 (502)
Q Consensus 204 ~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l 280 (502)
.....+.+.+|...|.+++|+|+|++|++++.|+ .|++||+.+++.. . + ..+...+.++
T Consensus 167 ~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-----------~---l----~~~~~~~~~~ 228 (415)
T 2hqs_A 167 DGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-----------Q---V----ASFPRHNGAP 228 (415)
T ss_dssp TSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-----------E---E----ECCSSCEEEE
T ss_pred CCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-----------E---e----ecCCCcccCE
Confidence 3455678889999999999999999999999885 9999999876521 0 1 1234579999
Q ss_pred EECCCCCEEE-EEECCC--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEec-CC--eEEEEEcCCCceEEEEe
Q 010754 281 DWNGEGTLLA-TGSYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 281 ~~s~~g~~l~-s~~~dg--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~--~i~~wd~~~~~~~~~~~ 354 (502)
+|+|+|+.|+ +++.+| .|++||+.+.....+..|...+.+++|+|+|++|++++. ++ .|++||+.+++. ..+.
T Consensus 229 ~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~ 307 (415)
T 2hqs_A 229 AFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRIT 307 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECC
T ss_pred EEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEe
Confidence 9999999888 666665 499999987777788889999999999999999998876 44 688889988764 3445
Q ss_pred eccCCeEEEEecCCCE-EEEEeCC---CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC---cEEEEEC
Q 010754 355 FHSGPTLDVDWRNNVS-FATSSTD---NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV---TAKIWNM 427 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~~-~~~~~~d---~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg---~i~iwd~ 427 (502)
.+...+..+.|++++. +++++.+ ..|++||+.+++. ..+..+. .+.+++|+|+|++|++++.++ .|++||+
T Consensus 308 ~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 308 WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEET
T ss_pred cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEEC
Confidence 5667788999988765 5555543 5899999998876 4455554 899999999999999988876 7999998
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
. +.....+..|.+.|.+++|+|.-.
T Consensus 386 ~-g~~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 386 D-GRFKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp T-SCCEEECCCSSSEEEEEEECCCCC
T ss_pred C-CCcEEEeeCCCCCCcCCccccccc
Confidence 7 556778889999999999999743
No 128
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.93 E-value=2.5e-23 Score=204.31 Aligned_cols=220 Identities=10% Similarity=0.102 Sum_probs=177.2
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE-EEEECCCeEEEEECCC-
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNG- 305 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~s~~~dg~i~iwd~~~- 305 (502)
.++++++.|+.|++||+.+++.. ..+. +...+.+++|+|+|+++ ++++.|+.|++||...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~-------------~~~~-----~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVT-------------ATIP-----VGSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEE-------------EEEE-----CSSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEcCCCCEEEEEECCCCeEE-------------EEee-----cCCCcceEEECCCCCEEEEECCCCCeEEEEECCCC
Confidence 46889999999999999876532 1111 12358999999999977 5666899999999865
Q ss_pred ceEEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-E-EEEeCCCeEEE
Q 010754 306 DLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-F-ATSSTDNMIYV 382 (502)
Q Consensus 306 ~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~-~~~~~d~~i~i 382 (502)
.....+.. ...+.+++|+|++++|+++ +.++.|++||+.+++.+..+..+ ..+.+++|++++. + ++++.++.|++
T Consensus 65 ~~~~~~~~-~~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 65 NVIATVPA-GSSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp EEEEEEEC-SSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEEEC-CCCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEE
Confidence 44444444 4489999999999988654 46799999999999988877654 4689999988754 4 67778999999
Q ss_pred EEcCCCcceEEEecCCCcEEEEEEcCCCCEE-EEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCcc
Q 010754 383 CKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 383 ~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~l-as~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~ 461 (502)
||+.+++.+..+..+ ..+.+++|+|++++| ++++.|+.|++||+++++++..+. +...+.+++|+|+|. .
T Consensus 143 ~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~-------~ 213 (391)
T 1l0q_A 143 INTVTKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGT-------K 213 (391)
T ss_dssp EETTTTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSS-------E
T ss_pred EECCCCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCC-------E
Confidence 999999998888865 457999999999987 677889999999999999888776 556799999999998 6
Q ss_pred EEEEe---ecCceEEEEe
Q 010754 462 LILAR---LIPYFLYWIC 476 (502)
Q Consensus 462 l~las---~~~~~~iw~~ 476 (502)
+++++ .++.+.+|+.
T Consensus 214 l~~~~~~~~~~~v~~~d~ 231 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDT 231 (391)
T ss_dssp EEEEEECSSCCEEEEEET
T ss_pred EEEEecCcCCCcEEEEEC
Confidence 67766 4688888863
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=1.5e-23 Score=207.61 Aligned_cols=241 Identities=12% Similarity=0.091 Sum_probs=186.2
Q ss_pred EEeccCCCceEEEEEcC--------------CCCeEEEEeCC------CcEEEEecCCCCccCCCCCCCceeEEEeeecC
Q 010754 209 TILEGHTSEVCACAWSP--------------AGSLLASGSGD------STARIWTIADGTSNGGAQNGPLNVLVLKHVKG 268 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p--------------~~~~l~sgs~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (502)
..+.+|...+..+++++ .+..++.++.+ +.|++||+..... ..
T Consensus 111 ~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~-----------~~------ 173 (415)
T 2hqs_A 111 NSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQ-----------FV------ 173 (415)
T ss_dssp EEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSC-----------EE------
T ss_pred eEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCC-----------EE------
Confidence 45788998888888775 25666666654 7999999875321 01
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCC---eEEEEECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCCe--EEEE
Q 010754 269 RTNEKSKDVTTLDWNGEGTLLATGSYDG---QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKT--AIVW 342 (502)
Q Consensus 269 ~~~~~~~~v~~l~~s~~g~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~--i~~w 342 (502)
...|...|.+++|+|+|++|++++.++ .|++||+.+.....+..|...+.+++|+|+|++|+ +++.++. |++|
T Consensus 174 -l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~ 252 (415)
T 2hqs_A 174 -VHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVM 252 (415)
T ss_dssp -EEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred -EeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEE
Confidence 112456799999999999999999885 99999998766667788888999999999999888 6666654 9999
Q ss_pred EcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeC-CC--eEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC
Q 010754 343 DVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSST-DN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 343 d~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~-d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~ 418 (502)
|+.+++. ..+..+...+..+.|+|++. +++++. ++ .|++||+.+++. ..+..+...+.+++|+|+|++|++++.
T Consensus 253 d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~ 330 (415)
T 2hqs_A 253 DLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSS 330 (415)
T ss_dssp ETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEE
T ss_pred ECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEEC
Confidence 9998876 55667788899999998765 666665 44 688889888764 455567788999999999999998876
Q ss_pred C---CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC-ceEEEEeee
Q 010754 419 D---VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP-YFLYWICSI 478 (502)
Q Consensus 419 d---g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~-~~~iw~~~~ 478 (502)
+ +.|++||+.++++. .+..|. .+.+++|+|+|. .++.++.++ ...+|.+++
T Consensus 331 ~~g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~~spdg~-------~l~~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 331 NGGQQHIAKQDLATGGVQ-VLSSTF-LDETPSLAPNGT-------MVIYSSSQGMGSVLNLVST 385 (415)
T ss_dssp CSSCEEEEEEETTTCCEE-ECCCSS-SCEEEEECTTSS-------EEEEEEEETTEEEEEEEET
T ss_pred cCCceEEEEEECCCCCEE-EecCCC-CcCCeEEcCCCC-------EEEEEEcCCCccEEEEEEC
Confidence 4 58999999988874 455554 899999999998 677777665 234554443
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.92 E-value=2.5e-23 Score=195.31 Aligned_cols=242 Identities=16% Similarity=0.249 Sum_probs=183.1
Q ss_pred eCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCC-CCccCCCCCCCceeEEEeeecCccccCCCCeEEEE
Q 010754 203 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 281 (502)
Q Consensus 203 ~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 281 (502)
+.......+..|...|.+++|+|++++|++++ ++.|++||+.+ ++..... ...+...+.+++
T Consensus 29 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~----------------~~~~~~~~~~~~ 91 (297)
T 2ojh_A 29 IRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVD----------------TGFATICNNDHG 91 (297)
T ss_dssp TTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECC----------------CTTCCCBCSCCE
T ss_pred CCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEec----------------cccccccccceE
Confidence 33445566778999999999999999999987 78999999987 6532110 011235688999
Q ss_pred ECCCCCEEEEEEC--CCeEEEE--ECCCceEEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCC-CceEEEEee
Q 010754 282 WNGEGTLLATGSY--DGQARIW--STNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKT-EEWKQQFEF 355 (502)
Q Consensus 282 ~s~~g~~l~s~~~--dg~i~iw--d~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~-~~~~~~~~~ 355 (502)
|+|+|++|++++. ++.+.|| +..+.....+..+. .+..++|+|++++|+ +++.++.+.+|++.. +.....+..
T Consensus 92 ~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~ 170 (297)
T 2ojh_A 92 ISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTH 170 (297)
T ss_dssp ECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCC
T ss_pred ECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEccc
Confidence 9999999999993 3445555 55555555554443 489999999999887 788899999998642 233455666
Q ss_pred ccCCeEEEEecCCCE-EEEEe-CCCeEEEEEcC-CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-----------Cc
Q 010754 356 HSGPTLDVDWRNNVS-FATSS-TDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-----------VT 421 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~-~~~~~-~d~~i~i~d~~-~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-----------g~ 421 (502)
+...+..+.|++++. +++++ .++.+.+|++. .+..+..+..|...+.+++|+|+|++|++++.+ +.
T Consensus 171 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~ 250 (297)
T 2ojh_A 171 GEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVR 250 (297)
T ss_dssp SSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEE
T ss_pred CCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceE
Confidence 778899999988765 55554 58899999987 556677788888889999999999999988876 56
Q ss_pred EEEEECCCCee--EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC
Q 010754 422 AKIWNMKQDKY--VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 422 i~iwd~~~~~~--~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~ 469 (502)
|++||+.+++. +..+.+|...+.+++|+|+|. .+++++.+.
T Consensus 251 l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-------~l~~~~~~~ 293 (297)
T 2ojh_A 251 VQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD-------EFAYVRYFP 293 (297)
T ss_dssp EEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS-------EEEEEEECC
T ss_pred EEEEecCCCCceeeeccCCCCcccccceECCCCC-------EEEEEEecc
Confidence 99999988765 444457888899999999998 666665543
No 131
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.90 E-value=4.7e-21 Score=184.09 Aligned_cols=241 Identities=12% Similarity=0.077 Sum_probs=172.7
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCC-CcEEEEecC--CCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGD-STARIWTIA--DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~d-g~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..|...+.+++|+|++++|++++.+ +.|++|++. ++.. ..+..... ...+..++|+|+|++
T Consensus 34 ~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~-----------~~~~~~~~-----~~~~~~~~~s~dg~~ 97 (343)
T 1ri6_A 34 VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGAL-----------TFAAESAL-----PGSLTHISTDHQGQF 97 (343)
T ss_dssp EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCE-----------EEEEEEEC-----SSCCSEEEECTTSSE
T ss_pred EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCce-----------eecccccc-----CCCCcEEEEcCCCCE
Confidence 3577889999999999988888886 999999997 3321 11111111 126889999999998
Q ss_pred EEEEEC-CCeEEEEECC---C-ceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCC-CceEE----EEee-c
Q 010754 289 LATGSY-DGQARIWSTN---G-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKT-EEWKQ----QFEF-H 356 (502)
Q Consensus 289 l~s~~~-dg~i~iwd~~---~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~-~~~~~----~~~~-~ 356 (502)
|++++. ++.|.+||+. . .....+. ....+.+++|+|+++++++++ .++.|.+||+.+ ++... .+.. .
T Consensus 98 l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 176 (343)
T 1ri6_A 98 VFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE 176 (343)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST
T ss_pred EEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC
Confidence 877765 7899999983 2 2223333 344688999999999888877 899999999987 65433 2222 2
Q ss_pred cCCeEEEEecCCCE-EE-EEeCCCeEEEEEcCC--Ccc--eEEEe----cC--CCcEEEEEEcCCCCEEE-EEeCCCcEE
Q 010754 357 SGPTLDVDWRNNVS-FA-TSSTDNMIYVCKIGE--NRP--IKTFA----GH--QGEVNCVKWDPTGSLLA-SCSDDVTAK 423 (502)
Q Consensus 357 ~~~v~~v~~~~~~~-~~-~~~~d~~i~i~d~~~--~~~--~~~~~----~h--~~~i~~l~~sp~g~~la-s~s~dg~i~ 423 (502)
...+..+.|++++. ++ ++..++.|.+|++.. +.. ...+. ++ ...+..++|+|+|++|+ ++..++.|+
T Consensus 177 ~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~ 256 (343)
T 1ri6_A 177 GAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLIT 256 (343)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred CCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEE
Confidence 34688899988765 44 444889999999954 332 22332 11 23577899999998877 455799999
Q ss_pred EEECC----CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 424 IWNMK----QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 424 iwd~~----~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
+||+. +.+.+..+..+.. +.+++|+|+|. .+++++ .++.+.+|..+
T Consensus 257 v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~-------~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 257 VFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGK-------YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEECTTSCCEEEEEEEECSSS-CCCEEECTTSS-------EEEEECTTTCEEEEEEEE
T ss_pred EEEEcCCCCceEEeeeecCCCc-cceEEECCCCC-------EEEEecCCCCeEEEEEEc
Confidence 99998 3345555554544 88999999998 666666 46889999654
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.89 E-value=3.5e-22 Score=212.95 Aligned_cols=253 Identities=14% Similarity=0.094 Sum_probs=184.3
Q ss_pred CCceEEEEEcCCCCeEEEEeC-CC-----cEEEEecCCCCccCCCCCCCce----eEEEee-ecCcc--ccCCCCeEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSG-DS-----TARIWTIADGTSNGGAQNGPLN----VLVLKH-VKGRT--NEKSKDVTTLD 281 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~-dg-----~v~iw~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~--~~~~~~v~~l~ 281 (502)
...|.+++|+|||++|++++. |+ .|++||+.+++........... .+.... ..... ......|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 356899999999999999998 88 8999999887532111100000 000000 00000 00002378999
Q ss_pred ECCCCCEEEEEECCCeEEEEECCCc---eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC
Q 010754 282 WNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 282 ~s~~g~~l~s~~~dg~i~iwd~~~~---~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
|+|||++|++++. +.|++||+.+. ....+..|...+.+++|+|+|++|++++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999987 99999999876 6677788888999999999999999887 56999999998876654433332
Q ss_pred C----------------eEEEEecCCCE-EEEEeCCC---------------------------------eEEEEEcCC-
Q 010754 359 P----------------TLDVDWRNNVS-FATSSTDN---------------------------------MIYVCKIGE- 387 (502)
Q Consensus 359 ~----------------v~~v~~~~~~~-~~~~~~d~---------------------------------~i~i~d~~~- 387 (502)
. +..+.|+|++. +++++.|+ .|++||+.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 2 36789988765 66666554 789999988
Q ss_pred CcceEEEe--cCCCcEEEEEEcCCCCEEEEEeC-----CCcEEEEECCCCeeEEEeccCCC----cEEEEEEccCCCCCC
Q 010754 388 NRPIKTFA--GHQGEVNCVKWDPTGSLLASCSD-----DVTAKIWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTN 456 (502)
Q Consensus 388 ~~~~~~~~--~h~~~i~~l~~sp~g~~las~s~-----dg~i~iwd~~~~~~~~~~~~h~~----~i~~v~~sp~g~~~~ 456 (502)
++...... .|...+..++| |||++|++++. +..|++||+.++++...+..+.. .+.+++|+|||+
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~--- 349 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS--- 349 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC---
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe---
Confidence 77654443 37788999999 99999987764 56799999999988777665543 456899999997
Q ss_pred CCCccEEEEeecCceEEEEee
Q 010754 457 NPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 457 ~~~~~l~las~~~~~~iw~~~ 477 (502)
.+++++.++...+|.++
T Consensus 350 ----~~~~~~~~g~~~l~~~~ 366 (741)
T 2ecf_A 350 ----ILWSSERTGFQHLYRID 366 (741)
T ss_dssp ----EEEEECTTSSCEEEEEC
T ss_pred ----EEEEecCCCccEEEEEc
Confidence 55556666778888765
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.5e-21 Score=192.36 Aligned_cols=212 Identities=13% Similarity=0.106 Sum_probs=159.0
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE----
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA---- 290 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~---- 290 (502)
...+..+++++++.++++++.|+ +++|+.................. .........+...|++++|+|+|++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIV--DKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEE--ECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCccccc--ccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 34588999999999999999988 99988643211100001000110 001111123456799999999999999
Q ss_pred EEECCCeEEEEECCCc------------eEEEecCccCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCceEEEEeecc
Q 010754 291 TGSYDGQARIWSTNGD------------LKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~------------~~~~~~~~~~~v~~l~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
+|+.|+.|+|||+... ....+.+|...|.+++|+|+ +++|++++.||+|++||++++........|.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~ 192 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPST 192 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGG
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCC
Confidence 7888999999996532 14556679999999999997 7899999999999999999997777777788
Q ss_pred CCeEEEEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCC-------CcEEEEEEcCCCCEEEEE-eCCC------cE
Q 010754 358 GPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQ-------GEVNCVKWDPTGSLLASC-SDDV------TA 422 (502)
Q Consensus 358 ~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-------~~i~~l~~sp~g~~las~-s~dg------~i 422 (502)
..+.+++|++++ .|++|+.||.|++||++ +.....+..|. ..|.+++|++++.++++. +.|| .+
T Consensus 193 ~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v 271 (434)
T 2oit_A 193 VAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDV 271 (434)
T ss_dssp GCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEE
T ss_pred CceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCce
Confidence 999999998754 68999999999999998 55566665442 379999999998887553 3443 38
Q ss_pred EEEECCCC
Q 010754 423 KIWNMKQD 430 (502)
Q Consensus 423 ~iwd~~~~ 430 (502)
++|++++.
T Consensus 272 ~i~~l~~~ 279 (434)
T 2oit_A 272 VMALLPKK 279 (434)
T ss_dssp EEEECCCT
T ss_pred EEEEeccC
Confidence 99999764
No 134
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.88 E-value=3.1e-20 Score=177.76 Aligned_cols=245 Identities=10% Similarity=0.034 Sum_probs=171.1
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
+..+..+...+ +++|+|++++|++++. ++.|.+||+.+++.. . ... ..+.....+++|+|+|
T Consensus 33 ~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~---------~---~~~----~~~~~~~~~~~~s~dg 95 (331)
T 3u4y_A 33 LNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK---------V---VAI----QEGQSSMADVDITPDD 95 (331)
T ss_dssp EEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE---------E---EEE----EECSSCCCCEEECTTS
T ss_pred eeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee---------E---Eec----ccCCCCccceEECCCC
Confidence 34445556667 9999999996666655 899999999876530 0 111 1122334449999999
Q ss_pred CEEEEEECCC---eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecCCe-EEEEEcCCCceEE----EEeecc
Q 010754 287 TLLATGSYDG---QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKT-AIVWDVKTEEWKQ----QFEFHS 357 (502)
Q Consensus 287 ~~l~s~~~dg---~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~-i~~wd~~~~~~~~----~~~~~~ 357 (502)
++++++..++ .|.+||+................+++|+|+|++++++ ..++. |.+|++.....+. ......
T Consensus 96 ~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~ 175 (331)
T 3u4y_A 96 QFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGG 175 (331)
T ss_dssp SEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSS
T ss_pred CEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCC
Confidence 9999555553 8999998754443333344557999999999866655 45578 9999987544331 122234
Q ss_pred CCeEEEEecCCCE-E-EEEeCCCeEEEEEcCCCcc---eEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCe
Q 010754 358 GPTLDVDWRNNVS-F-ATSSTDNMIYVCKIGENRP---IKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDK 431 (502)
Q Consensus 358 ~~v~~v~~~~~~~-~-~~~~~d~~i~i~d~~~~~~---~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~ 431 (502)
.....+.|++++. + +++..++.|.+||+.+++. +..+.. ...+..++|+|+|++|+.++ .++.|.+||+.+++
T Consensus 176 ~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 176 TRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGT 254 (331)
T ss_dssp SSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTE
T ss_pred CCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCc
Confidence 5678999988774 4 4455689999999999888 777774 46678999999999776655 57889999999988
Q ss_pred e--EEEeccC----CCc---EEEEEEccCCCCCCCCCccEEEEeec-CceEEEEee
Q 010754 432 Y--VHDLREH----SKE---IYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICS 477 (502)
Q Consensus 432 ~--~~~~~~h----~~~---i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~ 477 (502)
. +..+..+ ..+ +..++|+|+|. .+++++.+ +.+.+|...
T Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~-------~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 255 LSFVKSFGHGLLIDPRPLFGANQMALNKTET-------KLFISANISRELKVFTIS 303 (331)
T ss_dssp EEEEEEEECCCCCCCGGGTTCCCEEECTTSS-------EEEEEETTTTEEEEEETT
T ss_pred eeeecccccccccCCCCcccccceEECCCCC-------EEEEecCCCCcEEEEEec
Confidence 7 4333322 222 35689999998 66666554 578888754
No 135
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.2e-21 Score=190.68 Aligned_cols=177 Identities=19% Similarity=0.196 Sum_probs=144.1
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCC-----------ceEE-----EecCccCCeEEEEEecCCCEEE----EEe
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG-----------DLKC-----TLSKHKGPIFSLKWNKKGDYLL----TGS 334 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-----------~~~~-----~~~~~~~~v~~l~~~~~~~~l~----s~~ 334 (502)
..+..+++++++.++++++.+| +++|+... .... ....+...|.+++|+|++++|+ +++
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578999999999999999888 88887421 0111 1123567899999999999999 788
Q ss_pred cCCeEEEEEcCCC--------ce---EEEEeeccCCeEEEEecCC--CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcE
Q 010754 335 CDKTAIVWDVKTE--------EW---KQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV 401 (502)
Q Consensus 335 ~d~~i~~wd~~~~--------~~---~~~~~~~~~~v~~v~~~~~--~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i 401 (502)
.|++|++||+.++ +. +..+.+|...|.+++|+|. ..|++++.||+|++||++++..+....+|...|
T Consensus 116 ~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~~v 195 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLPSTVAV 195 (434)
T ss_dssp TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEECGGGCE
T ss_pred CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccCCCCce
Confidence 8999999998764 22 3445568899999999875 579999999999999999987777777899999
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC-------CCcEEEEEEccCCC
Q 010754 402 NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH-------SKEIYTIRWSPTGS 453 (502)
Q Consensus 402 ~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h-------~~~i~~v~~sp~g~ 453 (502)
++++|+|+|++|++|+.||.|++||++ ++....+..| ...|.+++|++++.
T Consensus 196 ~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~ 253 (434)
T 2oit_A 196 TSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYV 253 (434)
T ss_dssp EEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTE
T ss_pred eEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCce
Confidence 999999999999999999999999998 5555555433 23799999999875
No 136
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.87 E-value=4.4e-20 Score=188.40 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=183.1
Q ss_pred ceEEec-cCCCceEEEEEcCCCCeEEEEeCCCcEEEEec--CCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 207 DVTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTI--ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~-~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
.+..+. +|. +.+++|+|+|++|++++.|++|++||+ .+++.+ ..+. +...+..++|+
T Consensus 171 ~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~-------------~~i~-----~g~~p~~va~s 230 (543)
T 1nir_A 171 IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKV-------------AEIK-----IGIEARSVESS 230 (543)
T ss_dssp EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEE-------------EEEE-----CCSEEEEEEEC
T ss_pred EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEE-------------EEEe-----cCCCcceEEeC
Confidence 356666 444 899999999999999999999999999 554321 1111 13458999999
Q ss_pred C----CCCEEEEEEC-CCeEEEEECCC-ceEEEecC----------ccC-CeEEEEEecCCCE-EEEEecCCeEEEEEcC
Q 010754 284 G----EGTLLATGSY-DGQARIWSTNG-DLKCTLSK----------HKG-PIFSLKWNKKGDY-LLTGSCDKTAIVWDVK 345 (502)
Q Consensus 284 ~----~g~~l~s~~~-dg~i~iwd~~~-~~~~~~~~----------~~~-~v~~l~~~~~~~~-l~s~~~d~~i~~wd~~ 345 (502)
| +|+++++++. ++.|.+||... ..+..+.. |.. .+.++.++|++.. +++...++.|.+||+.
T Consensus 231 p~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 231 KFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp CSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred CCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 9 9999999985 89999999764 44444443 223 6889999997765 5566778999999998
Q ss_pred CCceEE--EEeeccCCeEEEEecCCCE-EE-EEeCCCeEEEEEcCCCcceEEEec----CCCcEEEEEEcCC-CCEEEEE
Q 010754 346 TEEWKQ--QFEFHSGPTLDVDWRNNVS-FA-TSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPT-GSLLASC 416 (502)
Q Consensus 346 ~~~~~~--~~~~~~~~v~~v~~~~~~~-~~-~~~~d~~i~i~d~~~~~~~~~~~~----h~~~i~~l~~sp~-g~~las~ 416 (502)
+.+.+. .+ .+...+.++.|++++. ++ ++..+++|.+||..+++.+.++.. |.+....+ ++|+ |.+++++
T Consensus 311 ~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~ 388 (543)
T 1nir_A 311 DIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTS 388 (543)
T ss_dssp TSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEE
T ss_pred CCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEec
Confidence 876544 33 3556678899988765 44 445689999999999999888874 54444333 5777 6677777
Q ss_pred e-CCCcEEEEECCC-------CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-------ecCceEEEEe
Q 010754 417 S-DDVTAKIWNMKQ-------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-------LIPYFLYWIC 476 (502)
Q Consensus 417 s-~dg~i~iwd~~~-------~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-------~~~~~~iw~~ 476 (502)
+ .|++|.+||+.+ +++++++.+|...+..|+|||+|+ .|.+++ .+..+.+|+.
T Consensus 389 ~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~-------~l~v~~~~~~~~~~~~~v~v~d~ 456 (543)
T 1nir_A 389 HLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS-------HLYVDTTFNPDARISQSVAVFDL 456 (543)
T ss_dssp BSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC-------EEEECCTTCSSHHHHTCEEEEET
T ss_pred cCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC-------cEEEecCCCCCcccCceEEEEEC
Confidence 6 689999999998 899999999998899999999998 555554 2668888864
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.86 E-value=4.1e-20 Score=196.98 Aligned_cols=232 Identities=9% Similarity=0.066 Sum_probs=176.8
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCC---CccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADG---TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
.|.+++|+|||++|++++. +.|++||+.++ ... ....+...+.+++|+|||++|++++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~------------------~l~~~~~~~~~~~~SPDG~~la~~~ 170 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR------------------QLTHGEGFATDAKLSPKGGFVSFIR 170 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC------------------BCCCSSSCEEEEEECTTSSEEEEEE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE------------------EcccCCcccccccCCCCCCEEEEEe
Confidence 4889999999999999987 99999999876 321 1122345699999999999999988
Q ss_pred CCCeEEEEECCCceEEEecC-ccCC----------------eEEEEEecCCCEEEEEecCC-------------------
Q 010754 294 YDGQARIWSTNGDLKCTLSK-HKGP----------------IFSLKWNKKGDYLLTGSCDK------------------- 337 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~-~~~~----------------v~~l~~~~~~~~l~s~~~d~------------------- 337 (502)
++.|++||+.+.....+.. +... +.++.|+|+|++|++++.|+
T Consensus 171 -~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 171 -GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVI 249 (741)
T ss_dssp -TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEE
T ss_pred -CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccce
Confidence 4699999988655544432 3222 47899999999999988776
Q ss_pred --------------eEEEEEcCC-CceEEEEe--eccCCeEEEEecCCCE-EEEEe-----CCCeEEEEEcCCCcceEEE
Q 010754 338 --------------TAIVWDVKT-EEWKQQFE--FHSGPTLDVDWRNNVS-FATSS-----TDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 338 --------------~i~~wd~~~-~~~~~~~~--~~~~~v~~v~~~~~~~-~~~~~-----~d~~i~i~d~~~~~~~~~~ 394 (502)
.|++||+.+ ++...... .+...+..+.| +++. +++++ .+..|++||+.+++....+
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~ 328 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLA 328 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEE
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEE
Confidence 899999988 87654432 25667899999 8755 55443 2568999999999887777
Q ss_pred ecCCC----cEEEEEEcCCCCEEEEEeCCCcEEEEECC-CCeeEEEeccCCCcEEEE-EEccCCCCCCCCCccEEEEeec
Q 010754 395 AGHQG----EVNCVKWDPTGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYTI-RWSPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 395 ~~h~~----~i~~l~~sp~g~~las~s~dg~i~iwd~~-~~~~~~~~~~h~~~i~~v-~~sp~g~~~~~~~~~l~las~~ 468 (502)
..+.. .+..++|+|+|+++++++.||.++||.+. .++ ...+..|...|.++ .|+|+|. .++..+.+
T Consensus 329 ~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~-------~l~~~~~~ 400 (741)
T 2ecf_A 329 HETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAG-------LAYFRAGI 400 (741)
T ss_dssp EEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTT-------EEEEEECS
T ss_pred EcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCC-------EEEEEEeC
Confidence 66543 45689999999999999999988888765 445 77888888889887 5999997 55444443
Q ss_pred -C--ceEEEEee
Q 010754 469 -P--YFLYWICS 477 (502)
Q Consensus 469 -~--~~~iw~~~ 477 (502)
+ .+++|...
T Consensus 401 ~~~~~~~l~~~~ 412 (741)
T 2ecf_A 401 ESARESQIYAVP 412 (741)
T ss_dssp SCTTCBEEEEEE
T ss_pred CCCceEEEEEEE
Confidence 3 68888754
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=8.7e-20 Score=193.38 Aligned_cols=260 Identities=17% Similarity=0.147 Sum_probs=182.0
Q ss_pred eCCCceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCC-----CCccCCCCCCCceeEEEeeecCccccCCCCe
Q 010754 203 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIAD-----GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV 277 (502)
Q Consensus 203 ~~~~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 277 (502)
+.......+..|...+.+++|+|+|++|+++ .|+.|++|++.+ ++...........+. .... ....+...+
T Consensus 108 ~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~--~g~~-~~~ee~~~~ 183 (706)
T 2z3z_A 108 MLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLV--YGQA-VHQREFGIE 183 (706)
T ss_dssp TTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEE--ESSC-CGGGCTTCC
T ss_pred CCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeE--cccc-hhhhhcCCC
Confidence 3444556667788889999999999999995 679999999987 553221111110000 0000 011122346
Q ss_pred EEEEECCCCCEEEEEE---------------------------------CCCeEEEEECCCceEEEec---CccCCeEEE
Q 010754 278 TTLDWNGEGTLLATGS---------------------------------YDGQARIWSTNGDLKCTLS---KHKGPIFSL 321 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~---------------------------------~dg~i~iwd~~~~~~~~~~---~~~~~v~~l 321 (502)
.+++|+|||++|++++ .+..|++||+.+.....+. .|...+.++
T Consensus 184 ~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~ 263 (706)
T 2z3z_A 184 KGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNL 263 (706)
T ss_dssp CSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEE
T ss_pred ceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeE
Confidence 8999999999999998 4468999998876544433 466779999
Q ss_pred EEecCCCEEEEEecCC-----eEEEEEcCCCceEEEEe-ec-cC---CeEEEEecC--CCE-EEEEeCCCeEEEEEcC-C
Q 010754 322 KWNKKGDYLLTGSCDK-----TAIVWDVKTEEWKQQFE-FH-SG---PTLDVDWRN--NVS-FATSSTDNMIYVCKIG-E 387 (502)
Q Consensus 322 ~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~~~-~~-~~---~v~~v~~~~--~~~-~~~~~~d~~i~i~d~~-~ 387 (502)
+|+|+|++|++++.++ .|++||+.+++....+. .. .. .+..+.|++ ++. ++++..++.+++|.+. +
T Consensus 264 ~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~ 343 (706)
T 2z3z_A 264 SWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTT 343 (706)
T ss_dssp EECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETT
T ss_pred EEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECC
Confidence 9999999999988776 99999999984333332 22 21 235688988 765 5566678888899886 5
Q ss_pred CcceEEEecCCCcEEE-EEEcCCCCEEEEEeC-CC----cEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCcc
Q 010754 388 NRPIKTFAGHQGEVNC-VKWDPTGSLLASCSD-DV----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 388 ~~~~~~~~~h~~~i~~-l~~sp~g~~las~s~-dg----~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~ 461 (502)
+..+..+..|...+.. ++|+|+|+.|+.++. ++ .|+.||+.+++ ...+. |...+.+++|||||+ .
T Consensus 344 ~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~-------~ 414 (706)
T 2z3z_A 344 GRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGS-------A 414 (706)
T ss_dssp SCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSS-------E
T ss_pred CCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCC-------E
Confidence 6677788888888877 799999998766554 44 67777877766 34444 667799999999998 5
Q ss_pred EEEEeecC----ceEEEE
Q 010754 462 LILARLIP----YFLYWI 475 (502)
Q Consensus 462 l~las~~~----~~~iw~ 475 (502)
+++++.+. .+.+|.
T Consensus 415 l~~~~~~~~~p~~i~l~d 432 (706)
T 2z3z_A 415 IIDIFQSPTVPRKVTVTN 432 (706)
T ss_dssp EEEEEECSSCSCEEEEEE
T ss_pred EEEEecCCCCCcEEEEEE
Confidence 55554443 366664
No 139
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.86 E-value=4.4e-21 Score=203.93 Aligned_cols=237 Identities=10% Similarity=0.120 Sum_probs=174.0
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC--
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD-- 295 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d-- 295 (502)
+.+++|+|+|+++++ +.||+|++||+.+++... . ...+ ......|.+++|||||++|++++.+
T Consensus 19 ~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~----------~---~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTV----------L---IEGK-KIESLRAIRYEISPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEE----------E---ECTT-TTTTTTCSEEEECTTSSEEEEEESCCC
T ss_pred ccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEE----------E---eccc-cccccccceEEECCCCCEEEEEecCcc
Confidence 567899999998776 789999999998875321 0 1110 0011248999999999999999864
Q ss_pred -------CeEEEEECCCceEEEecC---ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCe-----
Q 010754 296 -------GQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT----- 360 (502)
Q Consensus 296 -------g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v----- 360 (502)
+.|.+||+.+.....+.. |...+..++|+|+|+.|+.++. +.|++||+.+++..+....+...+
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~ 162 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGL 162 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEE
T ss_pred ceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcc
Confidence 788899988655444443 4445889999999999998876 799999999988776655444333
Q ss_pred -------------EEEEecCCCE-EEEEeCCC----------------------------------eEEEEEcCCCcceE
Q 010754 361 -------------LDVDWRNNVS-FATSSTDN----------------------------------MIYVCKIGENRPIK 392 (502)
Q Consensus 361 -------------~~v~~~~~~~-~~~~~~d~----------------------------------~i~i~d~~~~~~~~ 392 (502)
..+.|+|++. |++++.++ .|++||+.+++...
T Consensus 163 ~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~ 242 (723)
T 1xfd_A 163 SDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDL 242 (723)
T ss_dssp CCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCE
T ss_pred cceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeE
Confidence 7899998765 66665432 79999999888666
Q ss_pred EEecC------CCcEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCeeEEEecc-CCCcEE----EEEEccCCCCCCC
Q 010754 393 TFAGH------QGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDKYVHDLRE-HSKEIY----TIRWSPTGSGTNN 457 (502)
Q Consensus 393 ~~~~h------~~~i~~l~~sp~g~~las~s~----dg~i~iwd~~~~~~~~~~~~-h~~~i~----~v~~sp~g~~~~~ 457 (502)
.+..+ ...+..++|+|||++|++.+. +..|++||+.++++...+.. +...+. .++|||||+
T Consensus 243 ~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~---- 318 (723)
T 1xfd_A 243 EMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGR---- 318 (723)
T ss_dssp ECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSC----
T ss_pred EeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCC----
Confidence 66654 567999999999999877653 35799999999987766543 334443 789999998
Q ss_pred CCccEEEEee--cC----ceEEEEee
Q 010754 458 PNQQLILARL--IP----YFLYWICS 477 (502)
Q Consensus 458 ~~~~l~las~--~~----~~~iw~~~ 477 (502)
.++.++. ++ ...+|.++
T Consensus 319 ---~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 319 ---KFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp ---SEEEEEEECCSSSSCEEEEEEEC
T ss_pred ---eEEEEEecccCCCcceeEEEEEe
Confidence 5665422 34 45666655
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.86 E-value=7.9e-19 Score=169.37 Aligned_cols=235 Identities=11% Similarity=0.075 Sum_probs=175.0
Q ss_pred CceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-
Q 010754 216 SEVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS- 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~- 293 (502)
..+..++|+|+|+++ +++..++.|.+||+.+++....+..+ ............+.+++|+|+|+++++++
T Consensus 89 ~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 160 (353)
T 3vgz_A 89 LKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLD--------DRKRTEEVRPLQPRELVADDATNTVYISGI 160 (353)
T ss_dssp SCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESC--------CCCCCSSCCCCEEEEEEEETTTTEEEEEEE
T ss_pred CCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecC--------CCccccccCCCCCceEEECCCCCEEEEEec
Confidence 447889999999854 55556799999999887632211000 00000000112378899999999888776
Q ss_pred -CCCeEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee----ccCCeEEEEecC
Q 010754 294 -YDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF----HSGPTLDVDWRN 367 (502)
Q Consensus 294 -~dg~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~----~~~~v~~v~~~~ 367 (502)
.++.|.+||.... ....+..+...+.+++|+|+++++++++.++.|.+||+.+++....+.. +...+..++|++
T Consensus 161 ~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 240 (353)
T 3vgz_A 161 GKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDT 240 (353)
T ss_dssp SSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEET
T ss_pred CCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECC
Confidence 4789999998754 4445554666688999999999999999999999999999998887765 344577899987
Q ss_pred CCE-EEEE-eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEeccCCCcEE
Q 010754 368 NVS-FATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLREHSKEIY 444 (502)
Q Consensus 368 ~~~-~~~~-~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~~~~~~~~h~~~i~ 444 (502)
++. ++++ ..++.|.+||..+++.+..+..... .+++|+|+|++++.++ .++.|.+||..+++.+..+... ..+.
T Consensus 241 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~ 317 (353)
T 3vgz_A 241 ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPN 317 (353)
T ss_dssp TTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECC-SEEE
T ss_pred CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecC-CCCC
Confidence 653 4444 4569999999999998888875442 5799999999665555 6899999999999998888744 4689
Q ss_pred EEEEccCCCCCCCCCccEEEEeec
Q 010754 445 TIRWSPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 445 ~v~~sp~g~~~~~~~~~l~las~~ 468 (502)
+++|+|+|. .++++...
T Consensus 318 ~~~~s~dg~-------~l~v~~~~ 334 (353)
T 3vgz_A 318 SLALSADGK-------TLYVSVKQ 334 (353)
T ss_dssp EEEECTTSC-------EEEEEEEC
T ss_pred eEEEcCCCC-------EEEEEEcc
Confidence 999999998 56666554
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.86 E-value=1.5e-19 Score=184.54 Aligned_cols=255 Identities=14% Similarity=0.102 Sum_probs=185.2
Q ss_pred eEEeccCCCceEEEEEcC----CCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 208 VTILEGHTSEVCACAWSP----AGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p----~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
+..+. +...+..++|+| +|++|++++. +++|.+||..+.+.+..+.... .............+.++.+
T Consensus 215 ~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g------~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 215 VAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRG------MTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp EEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCE------ECSSSCCEESCCCEEEEEE
T ss_pred EEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccC------cccCccccccCCceEEEEE
Confidence 44555 445679999999 9999999884 8999999988766432111000 0000000012336899999
Q ss_pred CCCCCE-EEEEECCCeEEEEECCCc--eEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEEEee---
Q 010754 283 NGEGTL-LATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEF--- 355 (502)
Q Consensus 283 s~~g~~-l~s~~~dg~i~iwd~~~~--~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~--- 355 (502)
+|++.. +++...++.|.+||.... .......+...+.++.|+|+|++|++++ .+++|.+||+.+++++..+..
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ 367 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKT 367 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCC
Confidence 997765 556667899999997642 2212223556788999999999877655 589999999999999888875
Q ss_pred -ccCCeEEEEecCCCE-EEEEe-CCCeEEEEEcCC-------CcceEEEecCCCcEEEEEEcCCCCEEEEEe-------C
Q 010754 356 -HSGPTLDVDWRNNVS-FATSS-TDNMIYVCKIGE-------NRPIKTFAGHQGEVNCVKWDPTGSLLASCS-------D 418 (502)
Q Consensus 356 -~~~~v~~v~~~~~~~-~~~~~-~d~~i~i~d~~~-------~~~~~~~~~h~~~i~~l~~sp~g~~las~s-------~ 418 (502)
|.+....+...+.+. ++++. .|++|.+||+.+ .+.++++.+|.+.+..|+++|+|++|++++ .
T Consensus 368 ph~g~g~~~~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~ 447 (543)
T 1nir_A 368 PHPGRGANFVHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARI 447 (543)
T ss_dssp BCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHH
T ss_pred CCCCCCcccCCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCccc
Confidence 443344443233244 55554 589999999998 889999999998889999999999999987 2
Q ss_pred CCcEEEEECCCCeeE-EEe--------ccCCCcEEEEEEccCCCCCCCCCccEEEEee-----cCceEEEEe
Q 010754 419 DVTAKIWNMKQDKYV-HDL--------REHSKEIYTIRWSPTGSGTNNPNQQLILARL-----IPYFLYWIC 476 (502)
Q Consensus 419 dg~i~iwd~~~~~~~-~~~--------~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-----~~~~~iw~~ 476 (502)
+++|.|||+.+++.. ..+ ..+...+..++|+|+|. .++++.. ++.+.+|+.
T Consensus 448 ~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~-------~~~~s~~~~~~~~~~i~v~D~ 512 (543)
T 1nir_A 448 SQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGD-------EVWFSVWNGKNDSSALVVVDD 512 (543)
T ss_dssp HTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSS-------EEEEEEECCTTSCCEEEEEET
T ss_pred CceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCC-------EEEEEeecCCCCCCeEEEEEC
Confidence 679999999998877 443 35577899999999998 6666533 588999863
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=2.6e-19 Score=172.74 Aligned_cols=243 Identities=11% Similarity=0.097 Sum_probs=168.6
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeC---CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~---dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
..+...+..++|+|+|+ |++++. ++.|.+|++.++... .+... ..+...+..++|+|+|++
T Consensus 36 ~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~-----------~~~~~----~~~~~~p~~~a~spdg~~ 99 (347)
T 3hfq_A 36 LAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAH-----------KLNTV----VAPGTPPAYVAVDEARQL 99 (347)
T ss_dssp EEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEE-----------EEEEE----EEESCCCSEEEEETTTTE
T ss_pred eeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEE-----------Eeeee----ecCCCCCEEEEECCCCCE
Confidence 34557788899999999 554443 689999999655321 11111 122456889999999999
Q ss_pred EEEEE-CCCeEEEEECCC--ce--EEEecC---------ccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCceEEE-
Q 010754 289 LATGS-YDGQARIWSTNG--DL--KCTLSK---------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQ- 352 (502)
Q Consensus 289 l~s~~-~dg~i~iwd~~~--~~--~~~~~~---------~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~-~~~~~~~- 352 (502)
|++++ .++.|.+|++.. .. ...+.. +...+.+++|+|+|+.+++...++.|.+||+. +++....
T Consensus 100 l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~ 179 (347)
T 3hfq_A 100 VYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS 179 (347)
T ss_dssp EEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred EEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee
Confidence 98888 679999999752 21 222211 11248899999999966666668899999998 5543322
Q ss_pred -Eeec-cCCeEEEEecCCCE-EE-EEeCCCeEEEEEcCC--Ccc--eEEEecCC------CcEEEEEEcCCCCEE-EEEe
Q 010754 353 -FEFH-SGPTLDVDWRNNVS-FA-TSSTDNMIYVCKIGE--NRP--IKTFAGHQ------GEVNCVKWDPTGSLL-ASCS 417 (502)
Q Consensus 353 -~~~~-~~~v~~v~~~~~~~-~~-~~~~d~~i~i~d~~~--~~~--~~~~~~h~------~~i~~l~~sp~g~~l-as~s 417 (502)
+... ...+..+.|++++. ++ ++..++.|.+|++.. ++. +..+.... ..+..++|+|+|++| +++.
T Consensus 180 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~ 259 (347)
T 3hfq_A 180 VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNR 259 (347)
T ss_dssp EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEE
T ss_pred eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeC
Confidence 2222 23577899998775 44 456788999999874 432 23333322 358899999999987 5566
Q ss_pred CCCcEEEEECC---CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEEee
Q 010754 418 DDVTAKIWNMK---QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWICS 477 (502)
Q Consensus 418 ~dg~i~iwd~~---~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~~~ 477 (502)
.++.|.+|++. +.+.+..+..+...+..++|+|+|. .+++++.+ +.+.+|..+
T Consensus 260 ~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~-------~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 260 GYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA-------FVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS-------EEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC-------EEEEEEcCCCcEEEEEEe
Confidence 78999999997 3355666666666789999999998 66666554 678888543
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=2.7e-19 Score=172.67 Aligned_cols=235 Identities=7% Similarity=0.006 Sum_probs=180.4
Q ss_pred CCceEEEEEcCCCCeEEEEeC-------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 215 TSEVCACAWSPAGSLLASGSG-------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
...+..++|+|++++|++++. ++.|.+||..+++... .... ...+..++|+|+|+
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~-------------~~~~-----~~~~~~~~~s~dg~ 101 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQ-------------AIHN-----DLKPFGATINNTTQ 101 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEE-------------EEEE-----SSCCCSEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEE-------------EEec-----CCCcceEEECCCCC
Confidence 456789999999998888874 5689999998765321 1110 23467899999999
Q ss_pred EEEEE-ECCCeEEEEECCC-ceEEEecCccCC---------eEEEEEecCCCEEEEEe--cCCeEEEEEcCCCceEEEEe
Q 010754 288 LLATG-SYDGQARIWSTNG-DLKCTLSKHKGP---------IFSLKWNKKGDYLLTGS--CDKTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 288 ~l~s~-~~dg~i~iwd~~~-~~~~~~~~~~~~---------v~~l~~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~ 354 (502)
+++++ ..++.|.+||..+ .....+..+... +.+++|+|+++++++++ .++.|.+||..+++.+..+.
T Consensus 102 ~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~ 181 (353)
T 3vgz_A 102 TLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ 181 (353)
T ss_dssp EEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC
T ss_pred EEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec
Confidence 66555 4579999999864 444555443322 68899999999888776 47899999999999888887
Q ss_pred eccCCeEEEEecCC-CEEEEEeCCCeEEEEEcCCCcceEEEec----CCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECC
Q 010754 355 FHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMK 428 (502)
Q Consensus 355 ~~~~~v~~v~~~~~-~~~~~~~~d~~i~i~d~~~~~~~~~~~~----h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~ 428 (502)
.+...+..+.|+++ ..+++++.++.|.+||..+++.+..+.. +...+.+++|+|+|++|+.++. ++.|.+||..
T Consensus 182 ~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~ 261 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTR 261 (353)
T ss_dssp CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETT
T ss_pred CCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 56666788899776 4578888899999999999998887764 4567889999999997776665 5999999999
Q ss_pred CCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEe
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWIC 476 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~ 476 (502)
+++.+..+.... ...++|+|+|. .++++. .++.+.+|+.
T Consensus 262 ~~~~~~~~~~~~--~~~~~~s~dg~-------~l~v~~~~~~~v~~~d~ 301 (353)
T 3vgz_A 262 NGNILAKVAAPE--SLAVLFNPARN-------EAYVTHRQAGKVSVIDA 301 (353)
T ss_dssp TCCEEEEEECSS--CCCEEEETTTT-------EEEEEETTTTEEEEEET
T ss_pred CCcEEEEEEcCC--CceEEECCCCC-------EEEEEECCCCeEEEEEC
Confidence 999888877443 25799999997 555555 4677888863
No 144
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=9.3e-20 Score=193.68 Aligned_cols=248 Identities=10% Similarity=0.104 Sum_probs=175.7
Q ss_pred ceEEeccCCC---ceEEEEEcCCCCeEEEEeCC---------CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCC
Q 010754 207 DVTILEGHTS---EVCACAWSPAGSLLASGSGD---------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS 274 (502)
Q Consensus 207 ~~~~l~~H~~---~V~~~~~~p~~~~l~sgs~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (502)
....+.+|.. .|.+++|||||++|++++.+ +.+.+||+.+++... + .....+.
T Consensus 49 ~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--------------l-~~~~~~~ 113 (723)
T 1xfd_A 49 STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS--------------L-DPPEVSN 113 (723)
T ss_dssp CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE--------------C-CCTTCCS
T ss_pred EEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe--------------c-cCCcccc
Confidence 3455666665 49999999999999999875 778899998875310 1 1112234
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCce-EEEecCccCCe------------------EEEEEecCCCEEEEEec
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL-KCTLSKHKGPI------------------FSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~v------------------~~l~~~~~~~~l~s~~~ 335 (502)
..+..++|||||+.|++++. +.|++|++.+.. ......+...+ .+++|+|+|++|++++.
T Consensus 114 ~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~ 192 (723)
T 1xfd_A 114 AKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAI 192 (723)
T ss_dssp CCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEE
T ss_pred ccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEE
Confidence 45889999999999999986 899999987543 33334333333 78999999999998876
Q ss_pred CC----------------------------------eEEEEEcCCCceEEEEeec------cCCeEEEEecCCCEEE-EE
Q 010754 336 DK----------------------------------TAIVWDVKTEEWKQQFEFH------SGPTLDVDWRNNVSFA-TS 374 (502)
Q Consensus 336 d~----------------------------------~i~~wd~~~~~~~~~~~~~------~~~v~~v~~~~~~~~~-~~ 374 (502)
|+ .|++||+.+++....+..+ ...+..+.|+|++.++ +.
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~ 272 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTW 272 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEE
Confidence 53 7999999988765555543 4568899999998755 33
Q ss_pred e----CCCeEEEEEcCCCcceEEEec-CCCcEE----EEEEcCCCCEEEE--EeCCC------cEEEEE-CCCCe--eEE
Q 010754 375 S----TDNMIYVCKIGENRPIKTFAG-HQGEVN----CVKWDPTGSLLAS--CSDDV------TAKIWN-MKQDK--YVH 434 (502)
Q Consensus 375 ~----~d~~i~i~d~~~~~~~~~~~~-h~~~i~----~l~~sp~g~~las--~s~dg------~i~iwd-~~~~~--~~~ 434 (502)
. .+..|++||+.+++....+.. +...+. .++|+|+|+.|+. +..++ .|++|| ..++. +..
T Consensus 273 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~ 352 (723)
T 1xfd_A 273 LNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQ 352 (723)
T ss_dssp EETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCC
T ss_pred EcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCcccee
Confidence 2 235799999999887666644 334443 7899999997765 45677 577777 34444 145
Q ss_pred EeccCCCcEEE-EEEccCCCCCCCCCccEEEEeec---CceEEEEee
Q 010754 435 DLREHSKEIYT-IRWSPTGSGTNNPNQQLILARLI---PYFLYWICS 477 (502)
Q Consensus 435 ~~~~h~~~i~~-v~~sp~g~~~~~~~~~l~las~~---~~~~iw~~~ 477 (502)
.+..+...+.. ++|+|||. .|+..+.+ +.+.+|..+
T Consensus 353 ~l~~~~~~~~~~~~~spdg~-------~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 353 SITSGDWDVTKILAYDEKGN-------KIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp BSCCSSSCEEEEEEEETTTT-------EEEEEESSSCTTCCEEEEEC
T ss_pred EeecCCeEEEeeeEEcCCCC-------EEEEEEcCCCCcceEEEEEe
Confidence 55544445555 69999998 55555554 668888754
No 145
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=6.2e-20 Score=202.68 Aligned_cols=250 Identities=12% Similarity=0.093 Sum_probs=196.0
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC-C
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-G 284 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s-~ 284 (502)
...+.+.+|. .+.+.+|+|+|++|+++. ++.|.+|++...... .+..... ........+...+.+++|+ |
T Consensus 236 ~~~~~l~~~~-~~~~~~~SpDG~~la~~~-~~~i~~~d~~~~~l~-~l~~~~~------~~~~~~~~~~~~v~~~~~S~p 306 (1045)
T 1k32_A 236 KDLRKHTSFT-DYYPRHLNTDGRRILFSK-GGSIYIFNPDTEKIE-KIEIGDL------ESPEDRIISIPSKFAEDFSPL 306 (1045)
T ss_dssp CSCEECCCCC-SSCEEEEEESSSCEEEEE-TTEEEEECTTTCCEE-ECCCCCC------CBCCSEEEECGGGGEEEEEEC
T ss_pred CcceEecCCC-CcceeeEcCCCCEEEEEe-CCEEEEecCCceEee-eeccCcc------cccccccccccccceeeecCC
Confidence 3456666665 467789999999999885 799999998433211 1110000 0000011234468999999 9
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEecCccC-CeEEEEEecCCCEEEEEecCCeEE-EEEcCCCceEEEEeeccCCeEE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKG-PIFSLKWNKKGDYLLTGSCDKTAI-VWDVKTEEWKQQFEFHSGPTLD 362 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~v~~l~~~~~~~~l~s~~~d~~i~-~wd~~~~~~~~~~~~~~~~v~~ 362 (502)
+|+.|++++ ++.|.+|+..+.....+..|.. .+..++|+ +|+.|++++.++.+. +||+.++.... +..+...+..
T Consensus 307 dG~~la~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~ 383 (1045)
T 1k32_A 307 DGDLIAFVS-RGQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFA 383 (1045)
T ss_dssp GGGCEEEEE-TTEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEE
T ss_pred CCCEEEEEE-cCEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceee
Confidence 999999988 7899999988776666777877 89999999 999999998888899 99998876544 3467778999
Q ss_pred EEecCCC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC----------cEEEEECCCCe
Q 010754 363 VDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV----------TAKIWNMKQDK 431 (502)
Q Consensus 363 v~~~~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg----------~i~iwd~~~~~ 431 (502)
+.|+|++ .+++++.++.|++||+.+++....+.+|...+.+++|+|||++|++++.++ .|++||+.+++
T Consensus 384 ~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 384 MGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred eEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 9998875 477889999999999999988888878999999999999999999887654 89999999988
Q ss_pred eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 432 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 432 ~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
+..+..|...+.+++|+|||. .+++++.++....|.
T Consensus 464 -~~~l~~~~~~~~~~~~spdG~-------~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 464 -IFAATTENSHDYAPAFDADSK-------NLYYLSYRSLDPSPD 499 (1045)
T ss_dssp -EEECSCSSSBEEEEEECTTSC-------EEEEEESCCCCCEEC
T ss_pred -EEEeeCCCcccCCceEcCCCC-------EEEEEecccCCcCcc
Confidence 667778888899999999998 677777766666664
No 146
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.85 E-value=3.1e-19 Score=170.90 Aligned_cols=235 Identities=11% Similarity=0.098 Sum_probs=170.2
Q ss_pred ceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE--
Q 010754 217 EVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-- 293 (502)
Q Consensus 217 ~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-- 293 (502)
.+.+++|+|+++.+ ++++.++.|.+||+.+++.... +.. .....+...+.+++|+|+|++|++++
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~----------~~~--~~~~~~~~~~~~~~~s~dg~~l~~~~~~ 102 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR----------IDL--STPEERVKSLFGAALSPDGKTLAIYESP 102 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE----------EEC--CBTTEEEECTTCEEECTTSSEEEEEEEE
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee----------EEc--CCcccccccccceEECCCCCEEEEEecc
Confidence 47889999999765 5566688999999987653211 100 00000112467899999999998886
Q ss_pred ----------CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 294 ----------YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 294 ----------~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
.++.|.+||+.+............+.+++|+|++++|+++ ++.|.+||+.+++....+..+... ..+
T Consensus 103 ~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~ 179 (337)
T 1pby_B 103 VRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AET 179 (337)
T ss_dssp EEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTT
T ss_pred cccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCc
Confidence 5799999998764433322234567889999999988887 689999999999887777654311 122
Q ss_pred EecCCCE-EEE-EeCCC-----------------------eEEEEEcCCCcce-EEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 364 DWRNNVS-FAT-SSTDN-----------------------MIYVCKIGENRPI-KTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 364 ~~~~~~~-~~~-~~~d~-----------------------~i~i~d~~~~~~~-~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
.|++++. ++. +..++ .|.+||+.+++.. ..+..+...+.+++|+|+|++|+++
T Consensus 180 ~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~- 258 (337)
T 1pby_B 180 YAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA- 258 (337)
T ss_dssp BCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-
T ss_pred eeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-
Confidence 5555443 222 21222 5789999988764 3344566778999999999999988
Q ss_pred CCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 418 DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 418 ~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
++.|++||+.+++.+..+..+ ..+.+++|+|+|. .+++++.++.+.+|+.
T Consensus 259 -~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~-------~l~~~~~~~~i~v~d~ 308 (337)
T 1pby_B 259 -YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGS-------TVWLGGALGDLAAYDA 308 (337)
T ss_dssp -ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSC-------EEEEESBSSEEEEEET
T ss_pred -CCeEEEEECCCCcCcceecCC-CceeeEEECCCCC-------EEEEEcCCCcEEEEEC
Confidence 789999999999988877643 4578999999998 7788878888999974
No 147
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.85 E-value=1.5e-19 Score=169.39 Aligned_cols=209 Identities=13% Similarity=0.163 Sum_probs=156.0
Q ss_pred EEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEE-
Q 010754 232 SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKC- 309 (502)
Q Consensus 232 sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~- 309 (502)
+++.|++|++||+.+++.. . ...+...|.+++|+|+|++|++++ ++.|++||+.+ ....
T Consensus 17 ~~~~~~~i~~~d~~~~~~~-----------~-------~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~ 77 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMR-----------V-------VWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK 77 (297)
T ss_dssp -CCCCEEEEEEETTTTEEE-----------E-------EEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE
T ss_pred CCCcceeEEEEeCCCCcee-----------e-------eccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE
Confidence 4467899999999876421 1 112356799999999999999987 78999999876 4433
Q ss_pred EecCc-cCCeEEEEEecCCCEEEEEec--CCeEEE--EEcCCCceEEEEeeccCCeEEEEecCCCE-EE-EEeCCCeEEE
Q 010754 310 TLSKH-KGPIFSLKWNKKGDYLLTGSC--DKTAIV--WDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FA-TSSTDNMIYV 382 (502)
Q Consensus 310 ~~~~~-~~~v~~l~~~~~~~~l~s~~~--d~~i~~--wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~-~~~~d~~i~i 382 (502)
....+ ...+.+++|+|++++|++++. ++.+.| |++.++. ...+.. ...+..+.|++++. ++ +++.++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 78 VDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTK-NLPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp CCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCS-SSSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred eccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeec-CCCccceEECCCCCEEEEEECCCCceEE
Confidence 33344 367899999999999999983 344455 4555554 333333 33588899988764 44 6778899999
Q ss_pred EEcCC-CcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECC-CCeeEEEeccCCCcEEEEEEccCCCCCCCCC
Q 010754 383 CKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPN 459 (502)
Q Consensus 383 ~d~~~-~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~-~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~ 459 (502)
|++.. ......+..|...+.+++|+|+|++|+.++ .++.++||++. .+..+..+..|...+..++|+|+|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~------ 229 (297)
T 2ojh_A 156 YSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGD------ 229 (297)
T ss_dssp EEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSS------
T ss_pred EEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCC------
Confidence 98643 334566677888999999999999888766 58999999986 5666777888888899999999998
Q ss_pred ccEEEEeec
Q 010754 460 QQLILARLI 468 (502)
Q Consensus 460 ~~l~las~~ 468 (502)
.+++++.+
T Consensus 230 -~l~~~~~~ 237 (297)
T 2ojh_A 230 -KVVFVSYD 237 (297)
T ss_dssp -EEEEEEEE
T ss_pred -EEEEEEcC
Confidence 66777665
No 148
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.84 E-value=4.7e-20 Score=190.93 Aligned_cols=230 Identities=13% Similarity=0.141 Sum_probs=170.2
Q ss_pred CCceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..+|++++|+|||++||+++. ||+++||++.++... .+ ...+...+..++|+|| +++++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~--------------~l---t~~~~~~~~~~~~spd-~~l~~~~ 82 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETV--------------KL---NREPINSVLDPHYGVG-RVILVRD 82 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEE--------------EC---CSSCCSEECEECTTCS-EEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcE--------------ee---ecccccccccccCCCC-eEEEEec
Confidence 456999999999999999887 999999998554311 11 1112246899999999 7788777
Q ss_pred C---CCeEEEE--EC--CCceEEEecCccCCeEEEEEecCCCE-EEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 294 Y---DGQARIW--ST--NGDLKCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 294 ~---dg~i~iw--d~--~~~~~~~~~~~~~~v~~l~~~~~~~~-l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
. +...++| +. .+... .+... ..+...+|+|+++. +++.+.++.+.+||+.+++.......+. .++.|
T Consensus 83 ~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~ 157 (582)
T 3o4h_A 83 VSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVS 157 (582)
T ss_dssp CSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEE
T ss_pred cCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEE
Confidence 5 4555565 45 44444 33322 23456788888853 3444455556699999987665554333 78888
Q ss_pred cCCCE-EEEEeCC----CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeEEEecc
Q 010754 366 RNNVS-FATSSTD----NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 366 ~~~~~-~~~~~~d----~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg--~i~iwd~~~~~~~~~~~~ 438 (502)
+|++. +++++.+ +.|++||+.+++.. .+..|.+.+..++|||||++|++++.+| .|++||+.+++.. .+..
T Consensus 158 spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~ 235 (582)
T 3o4h_A 158 DIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL 235 (582)
T ss_dssp EEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC
T ss_pred CCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC
Confidence 87665 5556655 78999999888754 6778888999999999999999888888 8999999999887 7777
Q ss_pred CCCcEEEEE--------EccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 439 HSKEIYTIR--------WSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 439 h~~~i~~v~--------~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|...+..++ |+|||. .+++++.++.+++|..
T Consensus 236 ~~~~~~~~~~~~~~~~~~spdg~-------~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 236 PSKDFSSYRPTAITWLGYLPDGR-------LAVVARREGRSAVFID 274 (582)
T ss_dssp SCSHHHHHCCSEEEEEEECTTSC-------EEEEEEETTEEEEEET
T ss_pred CCcChhhhhhccccceeEcCCCc-------EEEEEEcCCcEEEEEE
Confidence 877777777 999997 6677777888888874
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.84 E-value=5.7e-20 Score=194.82 Aligned_cols=234 Identities=9% Similarity=0.090 Sum_probs=172.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.+++|+|+ ..++.+. |+.|++||+.+++.. . . ..+...+.+++|+|||+.|+++ .+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~~-----------~---l----~~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKVT-----------Y---L----FDTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEEE-----------E---E----ECCTTCCTTCEECTTSSEEEEE-ET
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCceE-----------E---c----cCCcccccCCcCCCCCCEEEEE-EC
Confidence 56999999999 6665554 599999999876421 0 1 1123457889999999999985 67
Q ss_pred CeEEEEECCC-----ceEEE-ecCccCC--------------eEEEEEecCCCEEEEEe---------------------
Q 010754 296 GQARIWSTNG-----DLKCT-LSKHKGP--------------IFSLKWNKKGDYLLTGS--------------------- 334 (502)
Q Consensus 296 g~i~iwd~~~-----~~~~~-~~~~~~~--------------v~~l~~~~~~~~l~s~~--------------------- 334 (502)
+.|++|++.+ ..... ...+... +.++.|+|+|++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999999875 44333 3333332 48999999999999987
Q ss_pred ------------cCCeEEEEEcCCCceEEEEe--eccCCeEEEEecCCCE-EEEEeCCC-----eEEEEEcCCCcceEEE
Q 010754 335 ------------CDKTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNNVS-FATSSTDN-----MIYVCKIGENRPIKTF 394 (502)
Q Consensus 335 ------------~d~~i~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~~~-~~~~~~d~-----~i~i~d~~~~~~~~~~ 394 (502)
.+..|++||+.+++...... .+...+..+.|++++. +++++.++ .|++||+.+++....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 44689999999887654432 3456689999998775 66666665 8999999998433333
Q ss_pred e-c-CCC---cEEEEEEcC--CCCEEEEEeCCCcEEEEECC-CCeeEEEeccCCCcEEE-EEEccCCCCCCCCCccEEEE
Q 010754 395 A-G-HQG---EVNCVKWDP--TGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILA 465 (502)
Q Consensus 395 ~-~-h~~---~i~~l~~sp--~g~~las~s~dg~i~iwd~~-~~~~~~~~~~h~~~i~~-v~~sp~g~~~~~~~~~l~la 465 (502)
. . +.. .+.+++|+| +|++|++++.||.++||.+. +++.+..+..|...+.+ ++|+|+|. .++++
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~-------~l~~~ 373 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGT-------RLYFE 373 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSS-------EEEEE
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCC-------EEEEE
Confidence 2 2 222 246789999 99999999999999999886 67778888888888887 89999997 55555
Q ss_pred eecC---ceEEEEee
Q 010754 466 RLIP---YFLYWICS 477 (502)
Q Consensus 466 s~~~---~~~iw~~~ 477 (502)
+.+. ...+|.++
T Consensus 374 ~~~~~~~~~~l~~~d 388 (706)
T 2z3z_A 374 STEASPLERHFYCID 388 (706)
T ss_dssp ESSSCTTCBEEEEEE
T ss_pred ecCCCCceEEEEEEE
Confidence 5543 35777654
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.84 E-value=1.3e-19 Score=200.23 Aligned_cols=240 Identities=11% Similarity=0.067 Sum_probs=188.6
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.....+.+|...+.++.|+++ .++++++.|++++||.+....... ..+. .+ ..+..++|+|+
T Consensus 194 ~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~------------~~l~----~~-~~~~~~~~SpD 255 (1045)
T 1k32_A 194 GAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDL------------RKHT----SF-TDYYPRHLNTD 255 (1045)
T ss_dssp TEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSC------------EECC----CC-CSSCEEEEEES
T ss_pred CCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcc------------eEec----CC-CCcceeeEcCC
Confidence 345667899999999999988 677788889999999875321100 0011 11 23567799999
Q ss_pred CCEEEEEECCCeEEEEECCCceEEEecC-----------ccCCeEEEEEe-cCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 286 GTLLATGSYDGQARIWSTNGDLKCTLSK-----------HKGPIFSLKWN-KKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~~~~~~~~~~-----------~~~~v~~l~~~-~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
|+.|+++. ++.|.+|+.....+..+.. |...+.+++|+ |+|++|++++ ++.|.+|++.++.... +
T Consensus 256 G~~la~~~-~~~i~~~d~~~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~ 332 (1045)
T 1k32_A 256 GRRILFSK-GGSIYIFNPDTEKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-V 332 (1045)
T ss_dssp SSCEEEEE-TTEEEEECTTTCCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-C
T ss_pred CCEEEEEe-CCEEEEecCCceEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-c
Confidence 99998885 8999999986655555444 34468999999 9999998887 8899999998876543 5
Q ss_pred eeccC-CeEEEEecCCC-EEEEEeCCCeEE-EEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 354 EFHSG-PTLDVDWRNNV-SFATSSTDNMIY-VCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 354 ~~~~~-~v~~v~~~~~~-~~~~~~~d~~i~-i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
..+.. .+..+.|+ ++ .+++++.++.+. +|++..+... .+.+|...+..++|+|+|++|++++.++.|++||+.++
T Consensus 333 ~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg 410 (1045)
T 1k32_A 333 PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETG 410 (1045)
T ss_dssp SCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred cCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCC
Confidence 55666 78899999 54 577778888888 9999877654 34478889999999999999999999999999999999
Q ss_pred eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC----------ceEEEE
Q 010754 431 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP----------YFLYWI 475 (502)
Q Consensus 431 ~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~----------~~~iw~ 475 (502)
+....+.+|...+.+++|||||. .++.++.++ .+.+|+
T Consensus 411 ~~~~~~~~~~~~v~~~~~SpDG~-------~la~~~~~~~~~~~~~~~~~i~l~d 458 (1045)
T 1k32_A 411 KPTVIERSREAMITDFTISDNSR-------FIAYGFPLKHGETDGYVMQAIHVYD 458 (1045)
T ss_dssp CEEEEEECSSSCCCCEEECTTSC-------EEEEEEEECSSTTCSCCEEEEEEEE
T ss_pred ceEEeccCCCCCccceEECCCCC-------eEEEEecCccccccCCCCCeEEEEE
Confidence 98887778999999999999998 666666544 677775
No 151
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.84 E-value=9.4e-19 Score=167.43 Aligned_cols=227 Identities=7% Similarity=0.011 Sum_probs=163.9
Q ss_pred EEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC-CCeEE
Q 010754 222 AWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY-DGQAR 299 (502)
Q Consensus 222 ~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~-dg~i~ 299 (502)
.|.+++ ..+++++.++.|++||+.+++... ... .+...+ +++|+|+|+++++++. ++.|.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-------------~~~----~~~~~~-~~~~s~dg~~l~~~~~~~~~i~ 65 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEILN-------------QIT----LGYDFV-DTAITSDCSNVVVTSDFCQTLV 65 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEEE-------------EEE----CCCCEE-EEEECSSSCEEEEEESTTCEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCcccceee-------------eEE----ccCCcc-eEEEcCCCCEEEEEeCCCCeEE
Confidence 455554 457888889999999998876321 111 113345 9999999997777766 88999
Q ss_pred EEECCCc-e-EEEecCccCCeEEEEEecCCCEEEEEecCC---eEEEEEcCCCceEEEEeeccCCeEEEEecCCCE--EE
Q 010754 300 IWSTNGD-L-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS--FA 372 (502)
Q Consensus 300 iwd~~~~-~-~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~---~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~--~~ 372 (502)
+||..+. . ...+..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+.. ......+.|+|++. ++
T Consensus 66 ~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPI-PYDAVGIAISPNGNGLIL 144 (331)
T ss_dssp EEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEEC-CTTEEEEEECTTSSCEEE
T ss_pred EEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEEC-CCCccceEECCCCCEEEE
Confidence 9998654 3 555666666666699999999999655553 899999999998887764 34568999988763 45
Q ss_pred EEeCCCe-EEEEEcCCCcce----EEEecCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEECCCCee---EEEeccCCCcE
Q 010754 373 TSSTDNM-IYVCKIGENRPI----KTFAGHQGEVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQDKY---VHDLREHSKEI 443 (502)
Q Consensus 373 ~~~~d~~-i~i~d~~~~~~~----~~~~~h~~~i~~l~~sp~g~~las-~s~dg~i~iwd~~~~~~---~~~~~~h~~~i 443 (502)
+...++. |.+|++.....+ .........+.+++|+|+|++|+. +..++.|++||+.+++. +..+..+ ..+
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~ 223 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN-NLP 223 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCC
T ss_pred EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCC
Confidence 5566688 999999865433 122234556899999999996554 55689999999999988 7777644 567
Q ss_pred EEEEEccCCCCCCCCCccEEEEee-cCceEEEE
Q 010754 444 YTIRWSPTGSGTNNPNQQLILARL-IPYFLYWI 475 (502)
Q Consensus 444 ~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~ 475 (502)
..++|+|+|. .+++++. ++.+.+|+
T Consensus 224 ~~~~~spdg~-------~l~v~~~~~~~i~~~d 249 (331)
T 3u4y_A 224 GTIVVSRDGS-------TVYVLTESTVDVFNFN 249 (331)
T ss_dssp CCEEECTTSS-------EEEEECSSEEEEEEEE
T ss_pred ceEEECCCCC-------EEEEEEcCCCEEEEEE
Confidence 8999999998 5555443 45566665
No 152
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.84 E-value=3.7e-19 Score=171.36 Aligned_cols=228 Identities=9% Similarity=0.007 Sum_probs=168.9
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEE-EECCCeE
Q 010754 220 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT-GSYDGQA 298 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s-~~~dg~i 298 (502)
.+++++++.++++++.+++|++||+.+++... .+.. +....+..++|+|+|+++++ +..++.|
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~-------------~~~~---~~~~~~~~~~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYK-------------SCVM---PDKFGPGTAMMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEE-------------EEEC---SSCCSSCEEEECTTSSEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEE-------------EEec---CCCCCCceeEECCCCCEEEEEeCCCCcE
Confidence 35678888999999999999999998765321 1111 11124778999999986654 4568999
Q ss_pred EEEECCCc-eEEEecCc------cCCeEEEEEecCCCEEEEEecC------------CeEEEEEcCCCce---EEEEeec
Q 010754 299 RIWSTNGD-LKCTLSKH------KGPIFSLKWNKKGDYLLTGSCD------------KTAIVWDVKTEEW---KQQFEFH 356 (502)
Q Consensus 299 ~iwd~~~~-~~~~~~~~------~~~v~~l~~~~~~~~l~s~~~d------------~~i~~wd~~~~~~---~~~~~~~ 356 (502)
.+||+.+. ....+... ...+.+++|+|+|++|++++.+ +.|.+||+.+++. +..+. +
T Consensus 68 ~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~ 146 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-M 146 (349)
T ss_dssp EEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-C
T ss_pred EEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeecc-C
Confidence 99998754 34344322 2337889999999999998865 8999999988543 33343 3
Q ss_pred cCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC--------------------------------------
Q 010754 357 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-------------------------------------- 398 (502)
Q Consensus 357 ~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-------------------------------------- 398 (502)
...+.+++|++++.+++++ +.|++||+.+++.+..+..+.
T Consensus 147 ~~~~~~~~~s~dg~l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 147 PRQVYLMRAADDGSLYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ 224 (349)
T ss_dssp CSSCCCEEECTTSCEEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-----
T ss_pred CCcccceeECCCCcEEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcC
Confidence 3457888898887766654 349999999888776664331
Q ss_pred ------------------------------CcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEE
Q 010754 399 ------------------------------GEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 447 (502)
Q Consensus 399 ------------------------------~~i~~l~~sp-~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~ 447 (502)
..+.+++|+| +|++|+++ ++.|++||+.+++.+..+.. ...+.+++
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~-~~~~~~~~ 301 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANL-DHTYYCVA 301 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEEC-SSCCCEEE
T ss_pred CccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcC-CCCccceE
Confidence 1345678889 99999888 88999999999998887763 34578999
Q ss_pred EccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 448 WSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 448 ~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
|+|+|. .+++++.++.+.+|+.
T Consensus 302 ~s~dg~-------~l~~~~~~~~v~v~d~ 323 (349)
T 1jmx_B 302 FDKKGD-------KLYLGGTFNDLAVFNP 323 (349)
T ss_dssp ECSSSS-------CEEEESBSSEEEEEET
T ss_pred ECCCCC-------EEEEecCCCeEEEEec
Confidence 999997 6777777888999975
No 153
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.82 E-value=4.2e-18 Score=163.40 Aligned_cols=225 Identities=9% Similarity=0.176 Sum_probs=154.8
Q ss_pred eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC-CeEEEEECC--C
Q 010754 229 LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD-GQARIWSTN--G 305 (502)
Q Consensus 229 ~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d-g~i~iwd~~--~ 305 (502)
++++++.|+.|++|++..... ...... ..+...+.+++|+|+|++|++++.+ +.|.+|+++ +
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~----------~~~~~~-----~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA----------LTLTQV-----VDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC----------EEEEEE-----EECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEeCCCCCeEEEEEECCCCc----------EEEeee-----EecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC
Confidence 455557899999999863211 001111 1234568899999999999999887 999999986 3
Q ss_pred ce---EEEecCccCCeEEEEEecCCCEEEEEec-CCeEEEEEcC---CCceEEEEeeccCCeEEEEecCCC-EEEEEe-C
Q 010754 306 DL---KCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVK---TEEWKQQFEFHSGPTLDVDWRNNV-SFATSS-T 376 (502)
Q Consensus 306 ~~---~~~~~~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~---~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~-~ 376 (502)
.. ...+..+ ..+..++|+|++++|++++. ++.|.+||+. +......+. ....+.++.|++++ .+++++ .
T Consensus 72 ~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 72 GALTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp CCEEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTTSSEEEEEEGG
T ss_pred CceeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCcccccccccc-CCCCceEEEECCCCCEEEEecCC
Confidence 22 2233333 37899999999998877665 8899999994 333444443 33458889998876 456665 8
Q ss_pred CCeEEEEEcCC-CcceE----EEec-CCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCC--Cee--EEEec----cC--
Q 010754 377 DNMIYVCKIGE-NRPIK----TFAG-HQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQ--DKY--VHDLR----EH-- 439 (502)
Q Consensus 377 d~~i~i~d~~~-~~~~~----~~~~-h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~--~~~--~~~~~----~h-- 439 (502)
++.|++||+.+ ++... .+.. ....+.+++|+|+|++|++++ .++.|++|++.. ++. ...+. ++
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 99999999987 54322 2333 345788999999999776554 789999999953 432 22222 11
Q ss_pred CCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 440 SKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 440 ~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
...+..++|+|+|. .++++. .++.+.+|...
T Consensus 230 ~~~~~~i~~s~dg~-------~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 230 TRWAADIHITPDGR-------HLYACDRTASLITVFSVS 261 (343)
T ss_dssp CCCEEEEEECTTSS-------EEEEEETTTTEEEEEEEC
T ss_pred cCCccceEECCCCC-------EEEEEecCCCEEEEEEEc
Confidence 23577899999997 555443 56788888765
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.81 E-value=1.6e-17 Score=161.14 Aligned_cols=241 Identities=11% Similarity=0.113 Sum_probs=164.3
Q ss_pred CCCceEEEEEcCCCCeEEEEeCC----CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGD----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
|...+..++|+|+|++|++++.+ +.|.+|++....- ....+... ..+......+++ ++++|
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---------~~~~~~~~----~~~~~~p~~~~~--dg~~l 112 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---------TLHLLNTQ----KTMGADPCYLTT--NGKNI 112 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---------EEEEEEEE----ECSSSCEEEEEE--CSSEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---------cEEEeeEe----ccCCCCcEEEEE--CCCEE
Confidence 67778889999999999999886 7999999875310 00111111 112345777888 88888
Q ss_pred EEEE-CCCeEEEEECCCc-eEE------EecC--------ccCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCc----
Q 010754 290 ATGS-YDGQARIWSTNGD-LKC------TLSK--------HKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEE---- 348 (502)
Q Consensus 290 ~s~~-~dg~i~iwd~~~~-~~~------~~~~--------~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~---- 348 (502)
++++ .++.|.+|++... ... ...+ +...+.+++|+|+|+++++++. ++.|.+|++....
T Consensus 113 ~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~ 192 (361)
T 3scy_A 113 VTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADN 192 (361)
T ss_dssp EEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTT
T ss_pred EEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccc
Confidence 7777 5789999997531 111 1111 1233588999999997766554 8899999987543
Q ss_pred ---eE-----EE-EeeccCCeEEEEecCCCE-EEEEe-CCCeEEEEEcCCCcc--eEEEe---cCCCcEEEEEEcCCCCE
Q 010754 349 ---WK-----QQ-FEFHSGPTLDVDWRNNVS-FATSS-TDNMIYVCKIGENRP--IKTFA---GHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 349 ---~~-----~~-~~~~~~~v~~v~~~~~~~-~~~~~-~d~~i~i~d~~~~~~--~~~~~---~h~~~i~~l~~sp~g~~ 412 (502)
.. .. ..........+.|++++. +++++ .++.|.+|++.++.. +..+. .+...+..++|+|+|++
T Consensus 193 ~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~ 272 (361)
T 3scy_A 193 KEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKY 272 (361)
T ss_dssp CCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSE
T ss_pred ccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCE
Confidence 21 11 222345678899998875 55555 689999999987653 33332 23345789999999999
Q ss_pred EEEEeC--CCcEEEEECC--CCe--eEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEEee
Q 010754 413 LASCSD--DVTAKIWNMK--QDK--YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWICS 477 (502)
Q Consensus 413 las~s~--dg~i~iwd~~--~~~--~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~~~ 477 (502)
|++++. ++.|.+|++. +++ .+..+.. ...+.+++|+|+|. .+++++ .++.+.+|.++
T Consensus 273 l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~-------~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 273 LYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGK-------YLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSC-------EEEEEETTTTEEEEEEEC
T ss_pred EEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCC-------EEEEEECCCCCEEEEEEE
Confidence 866665 4899999985 444 4444444 45688999999998 666666 45778887654
No 155
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.5e-19 Score=192.09 Aligned_cols=235 Identities=12% Similarity=0.069 Sum_probs=164.7
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC-----
Q 010754 220 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----- 294 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~----- 294 (502)
.++|+|+|.++++ +.|++|++||+.+++... . .... ......+.+++|||||++|++++.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~----------~---~~~~-~~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYT----------I---LSNR-TMKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEE----------E---ECHH-HHHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEE----------E---Eccc-cccccceeeEEECCCCCeEEEEecCceeE
Confidence 6799999965554 569999999998875311 0 1000 000124889999999999999876
Q ss_pred ----CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCCe---------
Q 010754 295 ----DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPT--------- 360 (502)
Q Consensus 295 ----dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~v--------- 360 (502)
++.|++||+.+............+..++|+|+|+.|+.+. ++.|++||+.+++..+.. .++...+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~ 163 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVY 163 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHH
T ss_pred EeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccccee
Confidence 7899999998765511011235688999999999999875 789999999888765432 1222222
Q ss_pred --------EEEEecCCCE-EEEEeCCC----------------------------------eEEEEEcCCCcce------
Q 010754 361 --------LDVDWRNNVS-FATSSTDN----------------------------------MIYVCKIGENRPI------ 391 (502)
Q Consensus 361 --------~~v~~~~~~~-~~~~~~d~----------------------------------~i~i~d~~~~~~~------ 391 (502)
..+.|+|++. |++++.|. .|++||+.+++..
T Consensus 164 ~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 243 (719)
T 1z68_A 164 EEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVP 243 (719)
T ss_dssp HHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECC
T ss_pred eeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEcc
Confidence 4799998864 66665442 7889999887653
Q ss_pred --EEEecCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEE----CCCCeeEEEe----ccCCCcEE-----EEEEccCC
Q 010754 392 --KTFAGHQGEVNCVKWDPTGSLLASCSDD----VTAKIWN----MKQDKYVHDL----REHSKEIY-----TIRWSPTG 452 (502)
Q Consensus 392 --~~~~~h~~~i~~l~~sp~g~~las~s~d----g~i~iwd----~~~~~~~~~~----~~h~~~i~-----~v~~sp~g 452 (502)
..+.+|...+..++|+||++++++.... ..|.+|| ..++++...+ ..|...+. .++|+|||
T Consensus 244 ~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 323 (719)
T 1z68_A 244 VPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDA 323 (719)
T ss_dssp CCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTS
T ss_pred CCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCC
Confidence 1234678889999999998887775432 2488999 8888776555 36676676 88999999
Q ss_pred CCCCCCCccEEEEe--ecCceEEEEee
Q 010754 453 SGTNNPNQQLILAR--LIPYFLYWICS 477 (502)
Q Consensus 453 ~~~~~~~~~l~las--~~~~~~iw~~~ 477 (502)
+ .+++.+ .++...+|.++
T Consensus 324 ~-------~l~~~~~~~~g~~~l~~~~ 343 (719)
T 1z68_A 324 I-------SYYKIFSDKDGYKHIHYIK 343 (719)
T ss_dssp S-------CEEEEEECTTSCEEEEEES
T ss_pred C-------eEEEEEEccCCceEEEEEE
Confidence 8 454433 34556666544
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.80 E-value=7e-17 Score=154.48 Aligned_cols=235 Identities=13% Similarity=0.112 Sum_probs=174.6
Q ss_pred CceEEEEEcCCCCeEEEEeCC------------------------CcEEEEecCCCCccCCCCCCCceeEEEeeecCccc
Q 010754 216 SEVCACAWSPAGSLLASGSGD------------------------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN 271 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~d------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (502)
+.|.+++++|+|+++++.+.+ ++|.+||..+++... ... .
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-------------~~~---~ 87 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQ-------------SSG---K 87 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEE-------------EEC---T
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEe-------------ccC---C
Confidence 679999999999999998887 468888877665311 110 1
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc--eEEEe---------cCccCCeEEEEEec-CCCEEEEEe-cCCe
Q 010754 272 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--LKCTL---------SKHKGPIFSLKWNK-KGDYLLTGS-CDKT 338 (502)
Q Consensus 272 ~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~--~~~~~---------~~~~~~v~~l~~~~-~~~~l~s~~-~d~~ 338 (502)
.+......++++++|+++++...++.|++|+.++. .+..+ ..+-.....++++| ++..+++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 22346889999999998888888999999998876 45544 23444689999999 788777776 6899
Q ss_pred EEEEEcCCCceEEEEeecc----------CCeEEEEecCC-CE-EEEEeCCCeEEEEEcCCCcceEEEe--cCCCcEEEE
Q 010754 339 AIVWDVKTEEWKQQFEFHS----------GPTLDVDWRNN-VS-FATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNCV 404 (502)
Q Consensus 339 i~~wd~~~~~~~~~~~~~~----------~~v~~v~~~~~-~~-~~~~~~d~~i~i~d~~~~~~~~~~~--~h~~~i~~l 404 (502)
|++|| .++..+..+.... .....+++.++ +. +++...++.|++|+..+++.+..+. .+...+.++
T Consensus 168 I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~ 246 (329)
T 3fvz_A 168 IVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAI 246 (329)
T ss_dssp EEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEE
T ss_pred EEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCccee
Confidence 99999 5677777664332 23788999775 44 5666678899999999888888874 456678999
Q ss_pred EEcCCCCEEEEE-------eCCCcEEEEECCCCeeEEEec---cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEE
Q 010754 405 KWDPTGSLLASC-------SDDVTAKIWNMKQDKYVHDLR---EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYW 474 (502)
Q Consensus 405 ~~sp~g~~las~-------s~dg~i~iwd~~~~~~~~~~~---~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw 474 (502)
+|+| +..+++. +.+..|++|+..+++.+..+. ++...+.+|+++|+|. .+++.+.++.+++|
T Consensus 247 ~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~-------lyvad~~~~~I~~~ 318 (329)
T 3fvz_A 247 SYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT-------VYIGDAHTNTVWKF 318 (329)
T ss_dssp EEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE-------EEEEESSSCCEEEE
T ss_pred eecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC-------EEEEECCCCEEEEE
Confidence 9999 4333333 345589999999999998873 5667799999999997 33333344555555
Q ss_pred E
Q 010754 475 I 475 (502)
Q Consensus 475 ~ 475 (502)
.
T Consensus 319 ~ 319 (329)
T 3fvz_A 319 T 319 (329)
T ss_dssp E
T ss_pred e
Confidence 4
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.79 E-value=1.8e-17 Score=161.05 Aligned_cols=240 Identities=9% Similarity=0.053 Sum_probs=164.7
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecC-CCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE--EE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIA-DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL--LA 290 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~--l~ 290 (502)
+...+..++|+|+|++|++++.+ .|.+|++. +++.. ...... . ...+.+++|+|+|++ ++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~-----------~~~~~~--~---~g~~~~~~~spdg~~l~~~ 100 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIV-----------HEASHP--I---GGHPRANDADTNTRAIFLL 100 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEE-----------EEEEEE--C---CSSGGGGCTTSCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEE-----------EeeEee--c---CCCCccEEECCCCCEEEEE
Confidence 34568899999999999999887 99999986 54321 010110 0 012456889999994 44
Q ss_pred EEE-------------CCCeEEEEECC--CceEEEec----CccCCeEEEEEecCCCEEEEEec-CCeEEEEEcC-CCce
Q 010754 291 TGS-------------YDGQARIWSTN--GDLKCTLS----KHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVK-TEEW 349 (502)
Q Consensus 291 s~~-------------~dg~i~iwd~~--~~~~~~~~----~~~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~-~~~~ 349 (502)
++. .+|.+.+|+++ +.....+. .+...+.+++|+|+|++|++++. ++.|++||+. +++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 101 AAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV 180 (365)
T ss_dssp ECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE
T ss_pred EecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE
Confidence 553 68999999985 34333332 24567899999999998887764 6799999998 7765
Q ss_pred EE--EEee--ccCCeEEEEecCCCE-EEEEe-CCCeEEEEEcC--CCcce---EEEe-------cCCC------cEEEEE
Q 010754 350 KQ--QFEF--HSGPTLDVDWRNNVS-FATSS-TDNMIYVCKIG--ENRPI---KTFA-------GHQG------EVNCVK 405 (502)
Q Consensus 350 ~~--~~~~--~~~~v~~v~~~~~~~-~~~~~-~d~~i~i~d~~--~~~~~---~~~~-------~h~~------~i~~l~ 405 (502)
.. .+.. +...+..+.|++++. +++++ .++.|.+|++. +++.. ..+. +|.. .+..++
T Consensus 181 ~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~ 260 (365)
T 1jof_A 181 ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVC 260 (365)
T ss_dssp EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEE
T ss_pred EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEE
Confidence 32 2332 255689999998874 55555 47899999875 45432 1222 1222 588999
Q ss_pred -EcCCCCEEEEEeCC-C-----cEEEEECC-CCeeEE---EeccCCCcEEEEEEcc---CCCCCCCCCccEEEEeec-Cc
Q 010754 406 -WDPTGSLLASCSDD-V-----TAKIWNMK-QDKYVH---DLREHSKEIYTIRWSP---TGSGTNNPNQQLILARLI-PY 470 (502)
Q Consensus 406 -~sp~g~~las~s~d-g-----~i~iwd~~-~~~~~~---~~~~h~~~i~~v~~sp---~g~~~~~~~~~l~las~~-~~ 470 (502)
|+|+|++|++++.+ + .|.+|++. +++... .+..+...+..++|+| +|. .+++++.+ +.
T Consensus 261 ~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~-------~l~v~~~~~~~ 333 (365)
T 1jof_A 261 ALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE-------WMAITDDQEGW 333 (365)
T ss_dssp EECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT-------EEEEECSSSCE
T ss_pred EECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC-------EEEEEEcCCCe
Confidence 99999998776543 2 89999996 566543 2333455567899999 787 66666654 78
Q ss_pred eEEEEee
Q 010754 471 FLYWICS 477 (502)
Q Consensus 471 ~~iw~~~ 477 (502)
+.+|..+
T Consensus 334 v~v~~~~ 340 (365)
T 1jof_A 334 LEIYRWK 340 (365)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 8898764
No 158
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.79 E-value=5.1e-16 Score=145.24 Aligned_cols=242 Identities=13% Similarity=0.176 Sum_probs=176.7
Q ss_pred ccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE-CCCCCEEE
Q 010754 212 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEGTLLA 290 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-s~~g~~l~ 290 (502)
.+|...+.+++++|++.++++.+.++.|.+|+... +... .+. .......+...+..+++ .+++++++
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~~~----------~~~-~~~~~~~~~~~p~~i~~~~~~g~l~v 93 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RFKF----------QFG-ECGKRDSQLLYPNRVAVVRNSGDIIV 93 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CEEE----------EEC-CBSSSTTCBSSEEEEEEETTTTEEEE
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cEEE----------Eec-ccCCCcccccCceEEEEEcCCCeEEE
Confidence 35567789999999999998888899999999763 2110 000 01111223356899999 57777666
Q ss_pred EEEC-CCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee--ccCCeEEEEec
Q 010754 291 TGSY-DGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--HSGPTLDVDWR 366 (502)
Q Consensus 291 s~~~-dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--~~~~v~~v~~~ 366 (502)
+... ++.|.+|+.++.....+.. +...+.+++++|+|+.+++...++.|.+||. .++.+..+.. +...+..+++.
T Consensus 94 ~~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~ 172 (286)
T 1q7f_A 94 TERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVN 172 (286)
T ss_dssp EECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEEC
T ss_pred EcCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEEC
Confidence 6543 7999999987777666543 3456899999999998888778899999996 4566665542 33468899998
Q ss_pred CCCEEEEE-eCCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCCCEEEEEeCCC-cEEEEECCCCeeEEEeccCCC-
Q 010754 367 NNVSFATS-STDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKYVHDLREHSK- 441 (502)
Q Consensus 367 ~~~~~~~~-~~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g~~las~s~dg-~i~iwd~~~~~~~~~~~~h~~- 441 (502)
+++.++++ ..++.|++|+. .+..+..+..+ ...+..|+++|+|+++++...++ .|++||. +++.+..+..+..
T Consensus 173 ~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~ 250 (286)
T 1q7f_A 173 DKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKH 250 (286)
T ss_dssp SSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCC
T ss_pred CCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCC
Confidence 87665544 56899999997 45556666543 36789999999999999888886 9999995 5677777764432
Q ss_pred -cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 442 -EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 442 -~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+.+++|+|+|. +++++.++.+++|.+
T Consensus 251 ~~~~~i~~~~~g~--------l~vs~~~~~v~v~~~ 278 (286)
T 1q7f_A 251 AQCFDVALMDDGS--------VVLASKDYRLYIYRY 278 (286)
T ss_dssp SCEEEEEEETTTE--------EEEEETTTEEEEEEC
T ss_pred CcceeEEECCCCc--------EEEECCCCeEEEEEc
Confidence 478999999986 555566778888864
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.78 E-value=9.2e-18 Score=173.70 Aligned_cols=241 Identities=9% Similarity=0.098 Sum_probs=174.0
Q ss_pred eeeCCCceEEeccCC-CceEEEEEcCCCCeEEEEeC---CCcEEEEecCC--CCccCCCCCCCceeEEEeeecCccccCC
Q 010754 201 FEIPNSDVTILEGHT-SEVCACAWSPAGSLLASGSG---DSTARIWTIAD--GTSNGGAQNGPLNVLVLKHVKGRTNEKS 274 (502)
Q Consensus 201 ~~~~~~~~~~l~~H~-~~V~~~~~~p~~~~l~sgs~---dg~v~iw~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 274 (502)
+.+.....+.+..|. ..|..++|+|+ +++++++. +...+||.+.. .... ..+. ..
T Consensus 49 w~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-------------~~l~-----~~ 109 (582)
T 3o4h_A 49 YLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-------------QRLE-----AV 109 (582)
T ss_dssp EEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC-------------EECT-----TS
T ss_pred EEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc-------------cccc-----CC
Confidence 344455566676666 68999999999 78887775 56667776643 2110 0000 01
Q ss_pred CCeEEEEECCCCCE-EEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCce
Q 010754 275 KDVTTLDWNGEGTL-LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEW 349 (502)
Q Consensus 275 ~~v~~l~~s~~g~~-l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d----~~i~~wd~~~~~~ 349 (502)
..+...+|+|+|+. +++.+.++.+.+||+.+.....+..+.. .+++|+|+|++|++++.+ +.|++||+.+++.
T Consensus 110 ~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 110 KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 23446688888753 3334444555599988766555554444 889999999999988877 7899999988876
Q ss_pred EEEEeeccCCeEEEEecCCCE-EEEEeCCC--eEEEEEcCCCcceEEEecCCCcEEEEE--------EcCCCCEEEEEeC
Q 010754 350 KQQFEFHSGPTLDVDWRNNVS-FATSSTDN--MIYVCKIGENRPIKTFAGHQGEVNCVK--------WDPTGSLLASCSD 418 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~--~i~i~d~~~~~~~~~~~~h~~~i~~l~--------~sp~g~~las~s~ 418 (502)
. .+..+...+..+.|+|++. ++++..++ .|++||+.+++.. .+.+|...+..++ |+|||.++++++.
T Consensus 188 ~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 188 R-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp E-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred e-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 5 5677778899999998875 66667778 8999999998877 7777877777777 9999999999999
Q ss_pred CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCc-eEEEEee
Q 010754 419 DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPY-FLYWICS 477 (502)
Q Consensus 419 dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~-~~iw~~~ 477 (502)
||.++||++ ++++. .+.+.|.+++|+ +|. .+++++.+.. ..+|.++
T Consensus 266 ~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~-------~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 266 EGRSAVFID--GERVE---APQGNHGRVVLW-RGK-------LVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp TTEEEEEET--TEEEC---CCSSEEEEEEEE-TTE-------EEEEEEETTEEEEEEEET
T ss_pred CCcEEEEEE--CCeec---cCCCceEEEEec-CCE-------EEEEEcCCCCCCeEEEEc
Confidence 999999999 76654 344679999999 887 5555555543 4555544
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=1.3e-18 Score=184.82 Aligned_cols=242 Identities=15% Similarity=0.169 Sum_probs=169.7
Q ss_pred EEeccCCC---ceEEEEEcCCCCeEEEEeC---------CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCC
Q 010754 209 TILEGHTS---EVCACAWSPAGSLLASGSG---------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKD 276 (502)
Q Consensus 209 ~~l~~H~~---~V~~~~~~p~~~~l~sgs~---------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (502)
..+.+|.. .|.+++|||||++|++++. |+.|++||+.+++..... .+ ...
T Consensus 50 ~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~-----------~l-------~~~ 111 (719)
T 1z68_A 50 TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN-----------EL-------PRP 111 (719)
T ss_dssp EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS-----------CC-------CSS
T ss_pred EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce-----------ec-------Ccc
Confidence 34444443 3999999999999999876 789999999887631100 00 134
Q ss_pred eEEEEECCCCCEEEEEECCCeEEEEECCCceEEEe--cCccCCe-----------------EEEEEecCCCEEEEEecCC
Q 010754 277 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL--SKHKGPI-----------------FSLKWNKKGDYLLTGSCDK 337 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~--~~~~~~v-----------------~~l~~~~~~~~l~s~~~d~ 337 (502)
+..++|||||+.|+++. ++.|++|++.+.....+ .++...| .+++|+|+|++|++++.|.
T Consensus 112 ~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~ 190 (719)
T 1z68_A 112 IQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFND 190 (719)
T ss_dssp BCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEEC
T ss_pred cccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECC
Confidence 88899999999999986 78999999875443333 2333222 4899999999999987652
Q ss_pred ----------------------------------eEEEEEcCCCceE--EE------EeeccCCeEEEEecCCCEEEEEe
Q 010754 338 ----------------------------------TAIVWDVKTEEWK--QQ------FEFHSGPTLDVDWRNNVSFATSS 375 (502)
Q Consensus 338 ----------------------------------~i~~wd~~~~~~~--~~------~~~~~~~v~~v~~~~~~~~~~~~ 375 (502)
.|++||+.+++.. .. +..+...+..+.|+|++.++...
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~ 270 (719)
T 1z68_A 191 TDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQW 270 (719)
T ss_dssp TTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEE
T ss_pred CCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEE
Confidence 7889999887653 11 12356678999999998766542
Q ss_pred C---C--CeEEEEE----cCCCcceEEE----ecCCCcEE-----EEEEcCCCCEEEE--EeCCC--cEEEEECCCCeeE
Q 010754 376 T---D--NMIYVCK----IGENRPIKTF----AGHQGEVN-----CVKWDPTGSLLAS--CSDDV--TAKIWNMKQDKYV 433 (502)
Q Consensus 376 ~---d--~~i~i~d----~~~~~~~~~~----~~h~~~i~-----~l~~sp~g~~las--~s~dg--~i~iwd~~~~~~~ 433 (502)
. + ..|++|| +.+++....+ .+|...+. .+.|+|+|+.|+. +..+| .|.+||+.+++ .
T Consensus 271 ~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~ 349 (719)
T 1z68_A 271 LKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-A 349 (719)
T ss_dssp EESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-C
T ss_pred eccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCc-e
Confidence 2 1 2488899 7777655444 46777776 8899999996544 44555 57777877766 4
Q ss_pred EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-----CceEEEEeee
Q 010754 434 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-----PYFLYWICSI 478 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-----~~~~iw~~~~ 478 (502)
..+..+...+..+.++ +|. .++..+.. +...+|...+
T Consensus 350 ~~lt~~~~~v~~~~~~-d~~-------~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 350 IQITSGKWEAINIFRV-TQD-------SLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EECSCSSSCEEEEEEE-CSS-------EEEEEESCGGGCTTCBEEEEEEC
T ss_pred EecccCceEEEEEEEE-eCC-------EEEEEEecCCCCCceEEEEEEeC
Confidence 5566566678888888 776 55555543 6678887554
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=1.2e-17 Score=177.56 Aligned_cols=237 Identities=10% Similarity=0.058 Sum_probs=165.0
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCcc-ccCCCCeEEEEECCCCCEEEEEECC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT-NEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
....++|+|+|.+|+++ |++|++|++.+++.... +..+. .........++|||||++|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF-------------LENSTFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEE-------------ECTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEE-------------EechhhhhhcccccceEECCCCCEEEEEECC
Confidence 35688999999999886 89999999998763211 11111 1112233568999999999999876
Q ss_pred ---------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCCe-----
Q 010754 296 ---------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPT----- 360 (502)
Q Consensus 296 ---------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~v----- 360 (502)
+.+.+||+.+.....+..+...+...+|||+|+.|+.+ .++.|++||+.++...+.. .++...+
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~ 161 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDIIYNGIT 161 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTEEESBC
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccceecCcc
Confidence 56779999988777788888899999999999999887 5789999999888754421 1222222
Q ss_pred ------------EEEEecCCCE-EEEEeCC------------------------------------CeEEEEEcCC---C
Q 010754 361 ------------LDVDWRNNVS-FATSSTD------------------------------------NMIYVCKIGE---N 388 (502)
Q Consensus 361 ------------~~v~~~~~~~-~~~~~~d------------------------------------~~i~i~d~~~---~ 388 (502)
..+.|+|++. |+..+.| ..|++||+.+ +
T Consensus 162 ~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~ 241 (740)
T 4a5s_A 162 DWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSV 241 (740)
T ss_dssp CHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSS
T ss_pred cccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCC
Confidence 3478998875 5544321 1588899988 7
Q ss_pred c--ceEEEe------cCCCcEEEEEEcCCCCEEEEEeC----CCcEEEEECCCCe----eEE--Ee--ccCCCcEE----
Q 010754 389 R--PIKTFA------GHQGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDK----YVH--DL--REHSKEIY---- 444 (502)
Q Consensus 389 ~--~~~~~~------~h~~~i~~l~~sp~g~~las~s~----dg~i~iwd~~~~~----~~~--~~--~~h~~~i~---- 444 (502)
. ....+. +|...+..++|+|||++++.... +..|++||+.+++ +.. .+ ..|...|.
T Consensus 242 ~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 242 TNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp SCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred CcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 3 233343 37778999999999997665533 3479999999887 322 22 34555544
Q ss_pred -EEEEccCCCCCCCCCccEE-EEe-ecCceEEEEe
Q 010754 445 -TIRWSPTGSGTNNPNQQLI-LAR-LIPYFLYWIC 476 (502)
Q Consensus 445 -~v~~sp~g~~~~~~~~~l~-las-~~~~~~iw~~ 476 (502)
.++|+|||+ .++ .++ .++...+|.+
T Consensus 322 ~~p~fspDG~-------~l~~~~s~~~G~~~l~~~ 349 (740)
T 4a5s_A 322 SEPHFTLDGN-------SFYKIISNEEGYRHICYF 349 (740)
T ss_dssp CCCEECTTSS-------EEEEEEECTTSCEEEEEE
T ss_pred CCceEcCCCC-------EEEEEEEcCCCceEEEEE
Confidence 789999998 444 343 3455556543
No 162
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.77 E-value=5.7e-16 Score=149.20 Aligned_cols=215 Identities=12% Similarity=0.132 Sum_probs=149.2
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEEe-CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCc-----cccCCCCeEEEEE
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASGS-GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGR-----TNEKSKDVTTLDW 282 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sgs-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~v~~l~~ 282 (502)
..+..|...+..++|+|+|++|++++ .++.|.+|++...... . .+...... .......+.+++|
T Consensus 79 ~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~--------~--~~~~~~~~~~~p~~~~~~~~~~~~~~ 148 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL--------T--LTDTVQHSGHGPRPEQDGSHIHYTDL 148 (347)
T ss_dssp EEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE--------E--EEEEEECCCCCSSTTCSSCCEEEEEE
T ss_pred eeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe--------e--ecceeecCCCCCCccccCCCceEEEE
Confidence 33455778899999999999888888 6899999999642210 0 11111100 0112345899999
Q ss_pred CCCCCEEEEEECCCeEEEEECC-CceEE---EecC-ccCCeEEEEEecCCCEEEE-EecCCeEEEEEcCC--CceE--EE
Q 010754 283 NGEGTLLATGSYDGQARIWSTN-GDLKC---TLSK-HKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDVKT--EEWK--QQ 352 (502)
Q Consensus 283 s~~g~~l~s~~~dg~i~iwd~~-~~~~~---~~~~-~~~~v~~l~~~~~~~~l~s-~~~d~~i~~wd~~~--~~~~--~~ 352 (502)
+|+|+++++...++.|++|++. ..... .+.. ....+..++|+|+|+++++ +..++.|.+|++.. ++.. ..
T Consensus 149 spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~ 228 (347)
T 3hfq_A 149 TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGI 228 (347)
T ss_dssp CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEE
T ss_pred CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeee
Confidence 9999966666678899999987 32222 1122 2336788999999997665 45688999999874 5432 22
Q ss_pred Eeecc------CCeEEEEecCCCE-E-EEEeCCCeEEEEEcCCC---cceEEEecCCCcEEEEEEcCCCCEEEEEeC-CC
Q 010754 353 FEFHS------GPTLDVDWRNNVS-F-ATSSTDNMIYVCKIGEN---RPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV 420 (502)
Q Consensus 353 ~~~~~------~~v~~v~~~~~~~-~-~~~~~d~~i~i~d~~~~---~~~~~~~~h~~~i~~l~~sp~g~~las~s~-dg 420 (502)
+.... ..+..++|++++. + ++...++.|.+|++... ..+..+..+...+..++|+|+|++|++++. ++
T Consensus 229 ~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 308 (347)
T 3hfq_A 229 VKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTD 308 (347)
T ss_dssp EESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTT
T ss_pred eeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCC
Confidence 32222 3478899998875 3 45667899999999732 456666666777899999999998888876 48
Q ss_pred cEEEE--ECCCCeeE
Q 010754 421 TAKIW--NMKQDKYV 433 (502)
Q Consensus 421 ~i~iw--d~~~~~~~ 433 (502)
.|.+| |..++++.
T Consensus 309 ~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 309 NATLYARDLTSGKLS 323 (347)
T ss_dssp EEEEEEECTTTCCEE
T ss_pred cEEEEEEeCCCCeEE
Confidence 99999 55566654
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=1.2e-16 Score=153.66 Aligned_cols=206 Identities=11% Similarity=0.075 Sum_probs=147.2
Q ss_pred ceEEEEEcCCCCeE-EEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 217 EVCACAWSPAGSLL-ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 217 ~V~~~~~~p~~~~l-~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
.+..++|+|+++++ +++..++.|.+||+.+++.... +. ...........+.+++|+|+|++|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~----------~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 112 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH----------AN-LSSVPGEVGRSMYSFAISPDGKEVYATVNP 112 (349)
T ss_dssp SSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE----------EE-SCCSTTEEEECSSCEEECTTSSEEEEEEEE
T ss_pred CCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE----------EE-cccccccccccccceEECCCCCEEEEEccc
Confidence 57899999999855 4556789999999987653210 00 000000001237889999999999999865
Q ss_pred ------------CeEEEEECCCc----eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc--
Q 010754 296 ------------GQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-- 357 (502)
Q Consensus 296 ------------g~i~iwd~~~~----~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-- 357 (502)
+.|.+||+.+. ....+. +...+.+++|+|+|+ +++++ +.|.+||+.+++.+..+....
T Consensus 113 ~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~ 188 (349)
T 1jmx_B 113 TQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWN 188 (349)
T ss_dssp EEECSSCEEECCCEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCC
T ss_pred ccccccccccCCCeEEEEECCCccccceeeecc-CCCcccceeECCCCc-EEEcc--CcEEEEeCCCCceeccccccccC
Confidence 89999997642 122222 334688999999999 66654 349999999988776654331
Q ss_pred ------------------------------------------------------------------CCeEEEEecC-CCE
Q 010754 358 ------------------------------------------------------------------GPTLDVDWRN-NVS 370 (502)
Q Consensus 358 ------------------------------------------------------------------~~v~~v~~~~-~~~ 370 (502)
..+..++|++ ++.
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~ 268 (349)
T 1jmx_B 189 RKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN 268 (349)
T ss_dssp CTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT
T ss_pred CccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC
Confidence 1233455656 554
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccC
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 439 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h 439 (502)
++..+ ++.|.+||+.+++.+..+.. ...+.+++|+|+|++|++++.++.|++||+.+++.+..+...
T Consensus 269 ~l~~~-~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 269 QIYGV-LNRLAKYDLKQRKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EEEEE-ESEEEEEETTTTEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEE-cCeEEEEECccCeEEEEEcC-CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 33333 89999999999988887763 345779999999999888888999999999999988777643
No 164
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.75 E-value=9.4e-17 Score=153.51 Aligned_cols=220 Identities=7% Similarity=-0.006 Sum_probs=158.3
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCC-CeEEEEECCCCCEEEE-EECCCeEEEEECCC
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK-DVTTLDWNGEGTLLAT-GSYDGQARIWSTNG 305 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~l~~s~~g~~l~s-~~~dg~i~iwd~~~ 305 (502)
.+|++++.++.|.+||+.+++... .... ++.. .+..++|+|+|+.+++ +..++.|.+||+.+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~-------------~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDK-------------VITI---ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEE-------------EEEC---TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEE-------------EEEc---CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 478999999999999998765321 1110 1111 3778999999987654 45578999999864
Q ss_pred -ceEEEecC-c----cCCeEEEEEecCCCEEEEEe------------cCCeEEEEEcCCCceEEEEeeccCCeEEEEecC
Q 010754 306 -DLKCTLSK-H----KGPIFSLKWNKKGDYLLTGS------------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 306 -~~~~~~~~-~----~~~v~~l~~~~~~~~l~s~~------------~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~ 367 (502)
.....+.. + ...+.+++|+|+|++|++++ .++.|.+||+.+++.+..+.. ...+..+.|++
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~ 144 (337)
T 1pby_B 66 GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR 144 (337)
T ss_dssp CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT
T ss_pred CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC
Confidence 43433332 1 22678899999999999886 579999999999888877764 44577888988
Q ss_pred CCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC-C-----------------------cE
Q 010754 368 NVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V-----------------------TA 422 (502)
Q Consensus 368 ~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-g-----------------------~i 422 (502)
++. ++++ ++.|++||+.+++.+..+..+... ..+.|+|+|++|+.++.. + .|
T Consensus 145 dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 145 DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 765 5555 689999999999888777654411 123789999877655433 2 46
Q ss_pred EEEECCCCeeE-EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 423 KIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 423 ~iwd~~~~~~~-~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.+||+.+++.. ..+..+...+.+++|+|+|. .++++ ++.+.+|+.
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~--~~~v~~~d~ 267 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKT-------RAFGA--YNVLESFDL 267 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSS-------EEEEE--ESEEEEEET
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCC-------EEEEe--CCeEEEEEC
Confidence 89999998875 22335666789999999998 44444 788888864
No 165
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.74 E-value=2.7e-15 Score=145.24 Aligned_cols=232 Identities=10% Similarity=0.112 Sum_probs=153.7
Q ss_pred eccCCCceEEEEEcCCCCeEEEEe-CCCcEEEEecCCCCccCCCCCCCceeEEEee-ecCccccCCCCeEEEEECCCCCE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGS-GDSTARIWTIADGTSNGGAQNGPLNVLVLKH-VKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs-~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
+..+......+++ ++++|++++ .++.|.+|++........... ...... .......+...+.+++|+|+|++
T Consensus 95 ~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~----~~~~~g~~~~~~~~~~~~~~~~~~spdg~~ 168 (361)
T 3scy_A 95 QKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDGALLPASD----VIEFKGSGPDKERQTMPHLHCVRITPDGKY 168 (361)
T ss_dssp EECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTSCBCSCSE----EEECCCCCSCTTTCSSCCEEEEEECTTSSE
T ss_pred eccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCCcCcccce----eEEccCCCCCccccCCCcceEEEECCCCCE
Confidence 3445566777888 787777766 578999999976433221100 000000 00001122345789999999997
Q ss_pred EEEEE-CCCeEEEEECCCc--------e------EEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEE-
Q 010754 289 LATGS-YDGQARIWSTNGD--------L------KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQ- 351 (502)
Q Consensus 289 l~s~~-~dg~i~iwd~~~~--------~------~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~- 351 (502)
+++++ .++.|.+|+++.. . ......+...+..++|+|+|+++++++ .++.|.+||+.++....
T Consensus 169 l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~ 248 (361)
T 3scy_A 169 LLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEI 248 (361)
T ss_dssp EEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEE
T ss_pred EEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEe
Confidence 76665 4789999987632 1 122233455678999999999888777 68999999998775432
Q ss_pred -EEee---ccCCeEEEEecCCCE-EEEEeC--CCeEEEEEcC--CCc--ceEEEecCCCcEEEEEEcCCCCEEEEEe-CC
Q 010754 352 -QFEF---HSGPTLDVDWRNNVS-FATSST--DNMIYVCKIG--ENR--PIKTFAGHQGEVNCVKWDPTGSLLASCS-DD 419 (502)
Q Consensus 352 -~~~~---~~~~v~~v~~~~~~~-~~~~~~--d~~i~i~d~~--~~~--~~~~~~~h~~~i~~l~~sp~g~~las~s-~d 419 (502)
.+.. +......+.|++++. ++++.. ++.|.+|++. ++. .+..+.. ...+.+++|+|+|++|++++ .+
T Consensus 249 ~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~ 327 (361)
T 3scy_A 249 QTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDT 327 (361)
T ss_dssp EEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTT
T ss_pred EEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCC
Confidence 2222 223467999998876 445544 5899999996 344 4445554 55788999999999888887 57
Q ss_pred CcEEEEE--CCCCeeEEEec-cCCCcEEEEEEc
Q 010754 420 VTAKIWN--MKQDKYVHDLR-EHSKEIYTIRWS 449 (502)
Q Consensus 420 g~i~iwd--~~~~~~~~~~~-~h~~~i~~v~~s 449 (502)
+.|.+|+ ..++++..... .+...+.+|+|.
T Consensus 328 ~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 328 NVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp TEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred CCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 8999964 45777654432 344568899986
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=1.1e-15 Score=149.31 Aligned_cols=228 Identities=13% Similarity=-0.036 Sum_probs=153.5
Q ss_pred ceEEeccCCCceEE-----EEEcCCCCeEEEEeC-CCc--EEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE
Q 010754 207 DVTILEGHTSEVCA-----CAWSPAGSLLASGSG-DST--ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 278 (502)
Q Consensus 207 ~~~~l~~H~~~V~~-----~~~~p~~~~l~sgs~-dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 278 (502)
.++.|..|...+.. .+|+|||++|+.++. ++. |.+||+.+++... ....+...+.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-----------------lt~~~~~~~~ 84 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-----------------LTEGRGDNTF 84 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-----------------CCCSSCBCSS
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-----------------eeeCCCCCcc
Confidence 45667777766666 899999999998887 674 7778887764211 1112223344
Q ss_pred EEEECCCCCEEEEEECCCeEEEEECCCceEE-EecCccCCeEEEE--EecCCCEEEEE----------------------
Q 010754 279 TLDWNGEGTLLATGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLK--WNKKGDYLLTG---------------------- 333 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~v~~l~--~~~~~~~l~s~---------------------- 333 (502)
.+.|+|||+.|+.++.++.|++||+.+.... .+..+...+.... ++|++.+++..
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 6789999999999999999999998764433 3344444443344 48999988743
Q ss_pred ecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCE-EEEEeCC------CeEEEEEcCCCcceEEEecCC--CcEEE
Q 010754 334 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVS-FATSSTD------NMIYVCKIGENRPIKTFAGHQ--GEVNC 403 (502)
Q Consensus 334 ~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~-~~~~~~d------~~i~i~d~~~~~~~~~~~~h~--~~i~~ 403 (502)
..+..|.+||+.+++... +..+...+..+.|+| ++. ++.+..+ ..|.++|...+.. ..+..+. ..+..
T Consensus 165 ~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTH 242 (388)
T ss_dssp CCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEE
T ss_pred CCcceEEEEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccccc
Confidence 234689999999987544 445666789999999 655 5555543 3788888766544 3444343 35788
Q ss_pred EEEcCCCCEEEEEeC-CC----cEEEEECCCCee--EEEeccCCCc---EEEEEEccCCC
Q 010754 404 VKWDPTGSLLASCSD-DV----TAKIWNMKQDKY--VHDLREHSKE---IYTIRWSPTGS 453 (502)
Q Consensus 404 l~~sp~g~~las~s~-dg----~i~iwd~~~~~~--~~~~~~h~~~---i~~v~~sp~g~ 453 (502)
+.|+|+|+.|+..+. ++ .|++||+.+++. +..+.++... ...++|+|||.
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 999999997765543 22 399999998874 3333331111 11237999998
No 167
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.72 E-value=3.5e-16 Score=164.42 Aligned_cols=243 Identities=7% Similarity=-0.001 Sum_probs=169.2
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEE--eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeE--------
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASG--SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT-------- 278 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sg--s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-------- 278 (502)
..+.+|...|..++|++++-++++. +.++...||....+.....+ ..+...+.
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l-----------------~~~~~~~~~~~~~~~~ 79 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESA-----------------LPAPWNVRNRVFEYSG 79 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEES-----------------SCTTCCBCCCGGGTCC
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCccee-----------------CCCCccccccccccCC
Confidence 4577899999999999887777777 56889999996433211111 11112222
Q ss_pred -EEEEC--CCCCE-EEEEEC-CCeEEEEECC--C-ceEEEecC-----ccCCeEEEEEecCCCEEEEEecC---------
Q 010754 279 -TLDWN--GEGTL-LATGSY-DGQARIWSTN--G-DLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCD--------- 336 (502)
Q Consensus 279 -~l~~s--~~g~~-l~s~~~-dg~i~iwd~~--~-~~~~~~~~-----~~~~v~~l~~~~~~~~l~s~~~d--------- 336 (502)
...|+ |||+. |+.++. +..|.+|++. + .....+.. |...+.+++|+|+|+.|++++.+
T Consensus 80 ~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~ 159 (662)
T 3azo_A 80 FPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDV 159 (662)
T ss_dssp CCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCE
T ss_pred ccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCc
Confidence 44555 99998 776654 5678888876 3 55555555 66778999999999999988877
Q ss_pred -CeEEEEEcCC------CceEEEEe-eccCCeEEEEecCCCE-EEEEeCC--------CeEEEEEcC-CC---cceEEEe
Q 010754 337 -KTAIVWDVKT------EEWKQQFE-FHSGPTLDVDWRNNVS-FATSSTD--------NMIYVCKIG-EN---RPIKTFA 395 (502)
Q Consensus 337 -~~i~~wd~~~------~~~~~~~~-~~~~~v~~v~~~~~~~-~~~~~~d--------~~i~i~d~~-~~---~~~~~~~ 395 (502)
..|++||+.+ +.. ..+. .+...+..+.|+|++. ++.++.+ ..|++||+. ++ .......
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~ 238 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG 238 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE
T ss_pred eeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC
Confidence 5899999987 554 3444 4455677889998875 5555544 479999998 56 4444455
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCeeEEEeccCCCc--------EEEEEEccCCCCCCCCCccEEEE
Q 010754 396 GHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDLREHSKE--------IYTIRWSPTGSGTNNPNQQLILA 465 (502)
Q Consensus 396 ~h~~~i~~l~~sp~g~~las~s~dg--~i~iwd~~~~~~~~~~~~h~~~--------i~~v~~sp~g~~~~~~~~~l~la 465 (502)
+|...+..+.|+|||+++++++.++ .|.+||+.+++.......+... +.+++|+|+|. .++++
T Consensus 239 ~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-------~~~~~ 311 (662)
T 3azo_A 239 GPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL-------IAVVH 311 (662)
T ss_dssp ETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC-------EEEEE
T ss_pred CCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCE-------EEEEE
Confidence 5678899999999999888888888 5666776677655443333221 45678888876 55555
Q ss_pred eecCceEEEEee
Q 010754 466 RLIPYFLYWICS 477 (502)
Q Consensus 466 s~~~~~~iw~~~ 477 (502)
+. +..++|..+
T Consensus 312 ~~-~~~~l~~~d 322 (662)
T 3azo_A 312 GK-GAAVLGILD 322 (662)
T ss_dssp BS-SSCEEEEEE
T ss_pred Ec-CccEEEEEE
Confidence 55 888888654
No 168
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.71 E-value=1.1e-15 Score=160.58 Aligned_cols=247 Identities=9% Similarity=-0.050 Sum_probs=167.7
Q ss_pred ceEEeccCCCceE---------EEEEc--CCCCe-EEEEeC-CCcEEEEecC--C-CCccCCCCCCCceeEEEeeecCc-
Q 010754 207 DVTILEGHTSEVC---------ACAWS--PAGSL-LASGSG-DSTARIWTIA--D-GTSNGGAQNGPLNVLVLKHVKGR- 269 (502)
Q Consensus 207 ~~~~l~~H~~~V~---------~~~~~--p~~~~-l~sgs~-dg~v~iw~~~--~-~~~~~~~~~~~~~~~~~~~~~~~- 269 (502)
..+.+..|...|. ...|+ |||+. |+.++. +..|.+|++. . +... .+...
T Consensus 59 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~--------------~l~~~~ 124 (662)
T 3azo_A 59 AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR--------------PLTPVS 124 (662)
T ss_dssp CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE--------------ECSCCC
T ss_pred CcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE--------------eccCCc
Confidence 3455666666655 56666 99988 776654 4556666654 2 2210 01000
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECC----------CeEEEEECCC------ceEEEec-CccCCeEEEEEecCCCEEEE
Q 010754 270 TNEKSKDVTTLDWNGEGTLLATGSYD----------GQARIWSTNG------DLKCTLS-KHKGPIFSLKWNKKGDYLLT 332 (502)
Q Consensus 270 ~~~~~~~v~~l~~s~~g~~l~s~~~d----------g~i~iwd~~~------~~~~~~~-~~~~~v~~l~~~~~~~~l~s 332 (502)
...+...+..++|+|||+.|++++.+ ..|++|++.+ .....+. .+...+..++|+|+|++|+.
T Consensus 125 ~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~ 204 (662)
T 3azo_A 125 AVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVW 204 (662)
T ss_dssp CSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEE
T ss_pred cCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEE
Confidence 00134468899999999999998876 5899999987 6666666 66677888999999999998
Q ss_pred EecCC--------eEEEEEcC-CC---ceEEEEeeccCCeEEEEecCCCE-EEEEeCCC--eEEEEEcCCCcceEEEecC
Q 010754 333 GSCDK--------TAIVWDVK-TE---EWKQQFEFHSGPTLDVDWRNNVS-FATSSTDN--MIYVCKIGENRPIKTFAGH 397 (502)
Q Consensus 333 ~~~d~--------~i~~wd~~-~~---~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~--~i~i~d~~~~~~~~~~~~h 397 (502)
++.++ .|++||+. ++ ........+...+..+.|++++. ++++..++ .|++||+.+++.......+
T Consensus 205 ~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~ 284 (662)
T 3azo_A 205 LAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRRE 284 (662)
T ss_dssp EEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCS
T ss_pred EECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeeccccc
Confidence 77553 79999998 56 44444444578899999998765 44555667 6777777666544333333
Q ss_pred CCc--------EEEEEEcCCCCEEEEEeCCCcEEEE--ECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee
Q 010754 398 QGE--------VNCVKWDPTGSLLASCSDDVTAKIW--NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 398 ~~~--------i~~l~~sp~g~~las~s~dg~i~iw--d~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
... +..++|+|+++++++++. +.++|| |+.+++ +..+..|...+..+ |++++. .+++.+.
T Consensus 285 ~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~~-------~~~~~~~ 354 (662)
T 3azo_A 285 EEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSGT-------RAVGVAA 354 (662)
T ss_dssp SBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEETT-------EEEEEEE
T ss_pred ccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCCC-------EEEEEEc
Confidence 222 567899999999999999 999999 555555 67777777777766 255554 3444444
Q ss_pred c--CceEEEEee
Q 010754 468 I--PYFLYWICS 477 (502)
Q Consensus 468 ~--~~~~iw~~~ 477 (502)
+ ....+|.++
T Consensus 355 ~~~~~~~i~~~d 366 (662)
T 3azo_A 355 SPRTAYEVVELD 366 (662)
T ss_dssp ETTEEEEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 3 345677654
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.71 E-value=3.9e-15 Score=157.56 Aligned_cols=223 Identities=12% Similarity=0.081 Sum_probs=162.1
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCC-----cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDS-----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+|...+..++|||||++||.++.++ .|++||+.+++... .... ...+..++|+|||+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~---------~~~~---------~~~~~~~~wspDg~ 183 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELP---------DVLE---------RVKFSCMAWTHDGK 183 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEE---------EEEE---------EECSCCEEECTTSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCc---------cccc---------CcccceEEEEeCCC
Confidence 4556789999999999998776543 89999998875321 0000 11266799999999
Q ss_pred EEEEEECCCe----------------EEEEECCCce---EEEec--CccCCeEEEEEecCCCEEEEEec-----CCeEEE
Q 010754 288 LLATGSYDGQ----------------ARIWSTNGDL---KCTLS--KHKGPIFSLKWNKKGDYLLTGSC-----DKTAIV 341 (502)
Q Consensus 288 ~l~s~~~dg~----------------i~iwd~~~~~---~~~~~--~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~~ 341 (502)
.|+.++.++. |++|++.+.. ...+. .+...+..+.|+|+|++|+.++. +..|++
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 263 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWY 263 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEE
Confidence 9999988766 9999987532 23333 34556789999999999987765 678999
Q ss_pred EEcCC------Cc-eEEEEeeccCCeEEEEecCCCEEEEEeCC----CeEEEEEcCCCc--ceEEEecCCC--cEEEEEE
Q 010754 342 WDVKT------EE-WKQQFEFHSGPTLDVDWRNNVSFATSSTD----NMIYVCKIGENR--PIKTFAGHQG--EVNCVKW 406 (502)
Q Consensus 342 wd~~~------~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~~d----~~i~i~d~~~~~--~~~~~~~h~~--~i~~l~~ 406 (502)
||+.+ +. ....+..+...+......++..|+..+.. +.|.+||+.++. ....+..|.. .+..+.|
T Consensus 264 ~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~ 343 (710)
T 2xdw_A 264 CDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVAC 343 (710)
T ss_dssp EEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEE
T ss_pred EECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEE
Confidence 99986 43 35556555555555433445556555443 369999998775 2355555644 6888999
Q ss_pred cCCCCEEEEEeCCCc--EEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 407 DPTGSLLASCSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 407 sp~g~~las~s~dg~--i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++++.++++...|+. |++|++.+++.+..+..+.+.+..++++|++.
T Consensus 344 ~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 344 VRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDT 392 (710)
T ss_dssp ETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCS
T ss_pred EcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCC
Confidence 988888889988885 66678777888888887888899999999886
No 170
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.71 E-value=3.4e-14 Score=135.80 Aligned_cols=237 Identities=11% Similarity=0.064 Sum_probs=169.2
Q ss_pred CceEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 206 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 206 ~~~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.....+.++...+.+++|+|+|++++++..++.|.+||..+++.. ... ..+...+.+++|+++
T Consensus 35 ~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-----------~~~------~~~~~~~~~i~~~~d 97 (333)
T 2dg1_A 35 EPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-----------RPF------VSHKANPAAIKIHKD 97 (333)
T ss_dssp EEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-----------EEE------ECSSSSEEEEEECTT
T ss_pred ceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-----------EEe------eCCCCCcceEEECCC
Confidence 345667777788899999999998888888999999998776421 000 012356999999999
Q ss_pred CCEEEEEECC----CeEEEEECCCceEE-Eec--CccCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCceEEE
Q 010754 286 GTLLATGSYD----GQARIWSTNGDLKC-TLS--KHKGPIFSLKWNKKGDYLLTGSC------DKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 286 g~~l~s~~~d----g~i~iwd~~~~~~~-~~~--~~~~~v~~l~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~ 352 (502)
|++++++..+ +.|.+||.++.... .+. .+...+.+++++|+|+.+++... .+.|..||..+++...
T Consensus 98 g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~- 176 (333)
T 2dg1_A 98 GRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTP- 176 (333)
T ss_dssp SCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEE-
T ss_pred CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEE-
Confidence 9988877766 68999998765443 222 23457899999999987776653 3567777766555443
Q ss_pred EeeccCCeEEEEecCCCE-E-EEEeCCCeEEEEEcCC-CcceEEE--------ecCCCcEEEEEEcCCCCEEEEEeCCCc
Q 010754 353 FEFHSGPTLDVDWRNNVS-F-ATSSTDNMIYVCKIGE-NRPIKTF--------AGHQGEVNCVKWDPTGSLLASCSDDVT 421 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~~~-~-~~~~~d~~i~i~d~~~-~~~~~~~--------~~h~~~i~~l~~sp~g~~las~s~dg~ 421 (502)
+......+..++|++++. + ++...++.|++|++.+ +..+..+ .++ ..+..++++++|+++++...++.
T Consensus 177 ~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~~~ 255 (333)
T 2dg1_A 177 IIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQGR 255 (333)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETTTE
T ss_pred eecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCCCE
Confidence 333344578899988753 4 4445678999999964 3333211 122 46888999999999888888899
Q ss_pred EEEEECCCCeeEEEeccCCC------cEEEEEEccCCCCCCCCCccEEEEeecC
Q 010754 422 AKIWNMKQDKYVHDLREHSK------EIYTIRWSPTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 422 i~iwd~~~~~~~~~~~~h~~------~i~~v~~sp~g~~~~~~~~~l~las~~~ 469 (502)
|.+||. +++.+..+..+.. .+.+++|+|+|. .|++++..+
T Consensus 256 v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~-------~L~v~~~~g 301 (333)
T 2dg1_A 256 VLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTN-------QLIICSNDI 301 (333)
T ss_dssp EEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSC-------EEEEEEECG
T ss_pred EEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCC-------EEEEEeCcc
Confidence 999998 5666666654432 689999999976 566666654
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.70 E-value=5.1e-16 Score=151.81 Aligned_cols=243 Identities=11% Similarity=0.024 Sum_probs=163.2
Q ss_pred EeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEE--EECCCCC
Q 010754 210 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL--DWNGEGT 287 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l--~~s~~g~ 287 (502)
...+|...+..++|+|+|+.|+.++.++.|++||+.+++... +.. .+...+... .++++++
T Consensus 75 lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-----------~~~------~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 75 LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-----------VYQ------VPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------EEE------CCTTEEEEEEEEECTTSS
T ss_pred eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee-----------eee------chhhcccccceeECCCCC
Confidence 334566666678999999999999999999999998875311 000 112223333 3489999
Q ss_pred EEEEE----------------------ECCCeEEEEECCCceEEEecCccCCeEEEEEec-CCCEEEEEecC------Ce
Q 010754 288 LLATG----------------------SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCD------KT 338 (502)
Q Consensus 288 ~l~s~----------------------~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d------~~ 338 (502)
+++.. ..++.|.+||+.+.....+..+...+..+.|+| +|+.|+.+..+ ..
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~ 217 (388)
T 3pe7_A 138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDAR 217 (388)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCS
T ss_pred eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcce
Confidence 88743 244789999988777777777778899999999 99988877653 37
Q ss_pred EEEEEcCCCceEEEEeecc--CCeEEEEecCCCE-EEEEeC--CC---eEEEEEcCCCcc--eEEEecCCCc---EEEEE
Q 010754 339 AIVWDVKTEEWKQQFEFHS--GPTLDVDWRNNVS-FATSST--DN---MIYVCKIGENRP--IKTFAGHQGE---VNCVK 405 (502)
Q Consensus 339 i~~wd~~~~~~~~~~~~~~--~~v~~v~~~~~~~-~~~~~~--d~---~i~i~d~~~~~~--~~~~~~h~~~---i~~l~ 405 (502)
|.++|..++.... +..+. ..+..+.|+|++. ++..+. ++ .|++||+.+++. +..+.++... ...+.
T Consensus 218 l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 296 (388)
T 3pe7_A 218 MWLINEDGTNMRK-VKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSL 296 (388)
T ss_dssp EEEEETTSCCCEE-SCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSE
T ss_pred EEEEeCCCCceEE-eeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCe
Confidence 8888877655433 33333 2477889998765 444332 22 399999998874 3333331110 11237
Q ss_pred EcCCCCEEEEE---------eCCCcEEEEECCCCeeEEEeccCCC-----------cEEEEEEccCCCCCCCCCccEEEE
Q 010754 406 WDPTGSLLASC---------SDDVTAKIWNMKQDKYVHDLREHSK-----------EIYTIRWSPTGSGTNNPNQQLILA 465 (502)
Q Consensus 406 ~sp~g~~las~---------s~dg~i~iwd~~~~~~~~~~~~h~~-----------~i~~v~~sp~g~~~~~~~~~l~la 465 (502)
|+|+|+.|+.. ..+..|++||+.+++. ..+..+.. .+.+++|+|||+ .++.+
T Consensus 297 ~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~-------~l~~~ 368 (388)
T 3pe7_A 297 MVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQVTHPHPSFTPDDK-------QILFT 368 (388)
T ss_dssp EEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSSTTCCCCEECTTSS-------EEEEE
T ss_pred EccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCcccccccccccCCCCccCCCCCC-------EEEEE
Confidence 99999988754 4567899999998775 34554554 578899999998 56655
Q ss_pred ee-cCceEEEEeee
Q 010754 466 RL-IPYFLYWICSI 478 (502)
Q Consensus 466 s~-~~~~~iw~~~~ 478 (502)
+. ++...+|..++
T Consensus 369 s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 369 SDVHGKPALYLATL 382 (388)
T ss_dssp ECTTSSCEEEEEEC
T ss_pred ecCCCceeEEEEEC
Confidence 53 56777887554
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.68 E-value=1.3e-14 Score=139.63 Aligned_cols=221 Identities=10% Similarity=0.086 Sum_probs=150.1
Q ss_pred CceEEEEEcCCCCeEEEEeCC---Cc--EEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 216 SEVCACAWSPAGSLLASGSGD---ST--ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~d---g~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
..+..++|+|||++||.++.+ +. |.+|++.+++.. .+.. ... +..++|+|+|+.|+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~-----------~l~~-------~~~-~~~~~wspdg~~l~ 119 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSK-----------KILE-------AKN-IRSLEWNEDSRKLL 119 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEE-----------EEEE-------ESE-EEEEEECTTSSEEE
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceE-----------EEEc-------CCC-ccceeECCCCCEEE
Confidence 568899999999999888754 33 777777665321 1110 112 88999999999988
Q ss_pred EEECC---------------------------CeEEEEECCCceE-EEecCccCCeEEEEEecCCCEEEEEecCC-----
Q 010754 291 TGSYD---------------------------GQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDK----- 337 (502)
Q Consensus 291 s~~~d---------------------------g~i~iwd~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~s~~~d~----- 337 (502)
.++.+ ..|.+||+.+... ..+.. . .+..+.|+|+| .++++..++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~ 196 (347)
T 2gop_A 120 IVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQY 196 (347)
T ss_dssp EEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCS
T ss_pred EEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe-EEEEEecccccccc
Confidence 88642 5788999876554 55544 4 78999999999 777776542
Q ss_pred --eEEEEEcCCCceEEEEeeccCCeEEEEecCCC-EEEEEeCC--------CeEEEEEcCCCcceEEEecCCCcEEE-EE
Q 010754 338 --TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTD--------NMIYVCKIGENRPIKTFAGHQGEVNC-VK 405 (502)
Q Consensus 338 --~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~~~~~~~d--------~~i~i~d~~~~~~~~~~~~h~~~i~~-l~ 405 (502)
...||.+.+++. ..+..+ ..+..+ +|++ .++.++.+ ..|++|| +++......++...+.. +.
T Consensus 197 ~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~ 270 (347)
T 2gop_A 197 FKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKI 270 (347)
T ss_dssp SCCEEEEEEETTEE-EEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEE
T ss_pred cccccEEEeCCCce-EEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccE
Confidence 344444445554 334334 455555 5444 46665543 4688888 55544444556677886 99
Q ss_pred EcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCce-EEEEee
Q 010754 406 WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYF-LYWICS 477 (502)
Q Consensus 406 ~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~-~iw~~~ 477 (502)
|+ ++ ++++++.++.++|| +.+++... +..+...|.+++|+| . .+++++.+... .+|.++
T Consensus 271 ~s-dg-~~~~~~~~~~~~l~-~~~g~~~~-~~~~~~~v~~~~~s~--~-------~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 271 KD-GK-VYFTLFEEGSVNLY-IWDGEIKP-IAKGRHWIMGFDVDE--I-------VVYLKETATRLRELFTWD 330 (347)
T ss_dssp ET-TE-EEEEEEETTEEEEE-EESSSEEE-EECSSSEEEEEEESS--S-------EEEEEECSSSCCEEEEES
T ss_pred Ec-Cc-EEEEEecCCcEEEE-EcCCceEE-EecCCCeEEeeeeeC--c-------EEEEEcCCCChHHheEeC
Confidence 99 88 99999999999999 88666543 444577899999999 4 44555555554 788764
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.68 E-value=1.7e-14 Score=135.51 Aligned_cols=230 Identities=10% Similarity=0.062 Sum_probs=164.5
Q ss_pred ceEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC
Q 010754 207 DVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 285 (502)
Q Consensus 207 ~~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~ 285 (502)
.+..+..+.....+++|+|+++ +++++..++.|..|+..++ .. . +. .+...+.+++++++
T Consensus 19 ~~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~-----------~---~~----~~~~~~~~l~~~~d 79 (296)
T 3e5z_A 19 EARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS-----------P---EM----HPSHHQNGHCLNKQ 79 (296)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE-----------E---EE----SSCSSEEEEEECTT
T ss_pred cEEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE-----------E---EE----CCCCCcceeeECCC
Confidence 4456666777788999999998 8888888999999998764 10 0 11 12356899999999
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCc----cCCeEEEEEecCCCEEEEE----e-------------cCCeEEEEE
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKH----KGPIFSLKWNKKGDYLLTG----S-------------CDKTAIVWD 343 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~----~~~v~~l~~~~~~~~l~s~----~-------------~d~~i~~wd 343 (502)
|+++++...++.|.+||.. +......... ...+..++++|+|+++++. + ..+.|..++
T Consensus 80 g~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~ 159 (296)
T 3e5z_A 80 GHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLA 159 (296)
T ss_dssp CCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEEC
T ss_pred CcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEEC
Confidence 9988777777899999984 4433222211 2346789999999988873 2 134566666
Q ss_pred cCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCCCeEEEEEcC-CCcc---eEEEecCCCcEEEEEEcCCCCEEEEEeC
Q 010754 344 VKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIG-ENRP---IKTFAGHQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 344 ~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~-~~~~---~~~~~~h~~~i~~l~~sp~g~~las~s~ 418 (502)
.. ++ ...+..+......++|++++. +++.+.++.|++|++. .+.. ...+..+...+.+++++++|+++++.
T Consensus 160 ~~-g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-- 235 (296)
T 3e5z_A 160 PD-GT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA-- 235 (296)
T ss_dssp TT-SC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--
T ss_pred CC-CC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--
Confidence 54 44 344445566778999988765 5555667899999997 4443 23343345567789999999977766
Q ss_pred CCcEEEEECCCCeeEEEeccCCCcEEEEEE-ccCCCCCCCCCccEEEEeec
Q 010754 419 DVTAKIWNMKQDKYVHDLREHSKEIYTIRW-SPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 419 dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~-sp~g~~~~~~~~~l~las~~ 468 (502)
++.|.+||.. ++.+..+..+.. +++++| +|++. .|++++.+
T Consensus 236 ~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~-------~L~v~t~~ 277 (296)
T 3e5z_A 236 GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGR-------TLYMTVST 277 (296)
T ss_dssp TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSC-------EEEEEETT
T ss_pred CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCC-------EEEEEcCC
Confidence 7889999986 788888877777 899999 57876 56666654
No 174
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.67 E-value=3.1e-14 Score=138.12 Aligned_cols=194 Identities=10% Similarity=0.102 Sum_probs=136.8
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECC--CceEEEecCcc--CCeEEEEEecCCCE--EEEEe-------------c
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTN--GDLKCTLSKHK--GPIFSLKWNKKGDY--LLTGS-------------C 335 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~--~~~~~~~~~~~--~~v~~l~~~~~~~~--l~s~~-------------~ 335 (502)
..+..++|+|+|++|++++.+ .|.+|++. +...... .+. +.+.+++|+|+|++ +++++ .
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~-~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEA-SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEE-EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEee-EeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 357889999999999999987 99999975 4433222 121 33566899999994 44553 6
Q ss_pred CCeEEEEEcC-CCceEEEEee----ccCCeEEEEecCCCE-EEEEe-CCCeEEEEEcC-CCcce--EEEe--cCCCcEEE
Q 010754 336 DKTAIVWDVK-TEEWKQQFEF----HSGPTLDVDWRNNVS-FATSS-TDNMIYVCKIG-ENRPI--KTFA--GHQGEVNC 403 (502)
Q Consensus 336 d~~i~~wd~~-~~~~~~~~~~----~~~~v~~v~~~~~~~-~~~~~-~d~~i~i~d~~-~~~~~--~~~~--~h~~~i~~ 403 (502)
++++.+|++. .++....+.. +...+..+.|+|++. ++++. .++.|++|++. +++.. ..+. .|...+..
T Consensus 118 ~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~ 197 (365)
T 1jof_A 118 AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRW 197 (365)
T ss_dssp CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEE
T ss_pred CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCE
Confidence 8999999997 4665544432 456789999998875 55444 46899999998 66542 3343 24567999
Q ss_pred EEEcCCCCEEEEEeC-CCcEEEEECC--CCeeE---EEe---c----cCCC------cEEEEE-EccCCCCCCCCCccEE
Q 010754 404 VKWDPTGSLLASCSD-DVTAKIWNMK--QDKYV---HDL---R----EHSK------EIYTIR-WSPTGSGTNNPNQQLI 463 (502)
Q Consensus 404 l~~sp~g~~las~s~-dg~i~iwd~~--~~~~~---~~~---~----~h~~------~i~~v~-~sp~g~~~~~~~~~l~ 463 (502)
++|+|+|++|++++. ++.|.+|++. ++++. ..+ . +|.. .+..++ |+|||+ .++
T Consensus 198 ~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-------~l~ 270 (365)
T 1jof_A 198 VAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-------YMF 270 (365)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-------EEE
T ss_pred eEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC-------EEE
Confidence 999999999988775 7899999865 56542 122 1 1222 588999 999998 555
Q ss_pred EEeecC------ceEEEEee
Q 010754 464 LARLIP------YFLYWICS 477 (502)
Q Consensus 464 las~~~------~~~iw~~~ 477 (502)
++..+. .+.+|...
T Consensus 271 v~~~~~~~~~~~~i~v~~~~ 290 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLR 290 (365)
T ss_dssp EEEEESSTTSCCEEEEEEEC
T ss_pred EECCCCCCCCCCeEEEEEEC
Confidence 555443 68888653
No 175
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=5.7e-15 Score=155.90 Aligned_cols=221 Identities=10% Similarity=0.067 Sum_probs=157.9
Q ss_pred cCCCceEEEEEcCCCCeEE-----EEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 213 GHTSEVCACAWSPAGSLLA-----SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~-----sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+|...+..++|||||++|| .|+.+.+|++||+.+++.... .... ......++|+|||+
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~---------------~~~~--~~~~~~~~wspDg~ 180 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV---------------DVIE--GGKYATPKWTPDSK 180 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS---------------CCBS--CCTTCCCEECTTSS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC---------------cccC--cccccceEEecCCC
Confidence 5667899999999999998 444457899999998764200 0000 11126789999999
Q ss_pred EEEEEECCCe-------------EEEEECCCce-----EEEecCccCCeEEEEEecCCCEEEEEecCC----eEEEEEcC
Q 010754 288 LLATGSYDGQ-------------ARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK----TAIVWDVK 345 (502)
Q Consensus 288 ~l~s~~~dg~-------------i~iwd~~~~~-----~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~----~i~~wd~~ 345 (502)
.|+.++.+.. |++|++.+.. +.....+...+.++.|+|+|++|+.++.++ .|++||..
T Consensus 181 ~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~ 260 (695)
T 2bkl_A 181 GFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG 260 (695)
T ss_dssp EEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT
T ss_pred EEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC
Confidence 9999998776 9999987432 223334556789999999999998877666 67777766
Q ss_pred CCceEEEEeeccCCeEEEEecCCCEEEEEeC----CCeEEEEEcCCCcc--eEEEecC--CCcEEEEEEcCCCCEEEEEe
Q 010754 346 TEEWKQQFEFHSGPTLDVDWRNNVSFATSST----DNMIYVCKIGENRP--IKTFAGH--QGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 346 ~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~----d~~i~i~d~~~~~~--~~~~~~h--~~~i~~l~~sp~g~~las~s 417 (502)
++.. ..+..+...+....|.++. ++..+. ++.|.+||+.++.. ...+..+ ...+..++|+ ++.++++..
T Consensus 261 ~~~~-~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 261 EKDF-RLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp CSSC-EEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CCce-EEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 5554 4445555566666676666 555543 57899999987753 2344333 4568889998 778889999
Q ss_pred CCCcEEEEECC-CCeeEEEeccC-CCcEEEEEEccCCC
Q 010754 418 DDVTAKIWNMK-QDKYVHDLREH-SKEIYTIRWSPTGS 453 (502)
Q Consensus 418 ~dg~i~iwd~~-~~~~~~~~~~h-~~~i~~v~~sp~g~ 453 (502)
.|+..+||.+. +++.+..+..+ .+.|..++|+|++.
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLD 375 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCS
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCC
Confidence 99998888665 46666666655 66788889999886
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.67 E-value=6.3e-14 Score=135.57 Aligned_cols=229 Identities=10% Similarity=0.109 Sum_probs=149.0
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEe----------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCe
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV 277 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 277 (502)
+..+..+..+ .++|+|+|++|++++ .+++|.+||+.+.+.... +...... ..+....
T Consensus 44 ~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~----------i~~~~~~-~~~g~~p 110 (361)
T 2oiz_A 44 LGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKE----------ISLPPKR-VQGLNYD 110 (361)
T ss_dssp EEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEE----------EEECTTB-CCBCCCG
T ss_pred EEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEE----------EEcCccc-cccCCCc
Confidence 3445555555 899999999999886 367899999887653211 1101000 1122456
Q ss_pred EEEEECCCCCEEEEEEC--CCeEEEEECCCceEEEe-cCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCC-CceE--
Q 010754 278 TTLDWNGEGTLLATGSY--DGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKT-EEWK-- 350 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~-~~~~-- 350 (502)
..++++|+|++|+++.. ++.|.+||+........ ....+ ...+.+.|++ ..+++.+.||.+.+|++.. ++..
T Consensus 111 ~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~ 189 (361)
T 2oiz_A 111 GLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQ 189 (361)
T ss_dssp GGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEE
T ss_pred ceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeee
Confidence 78999999999999874 58999999876544332 22221 1223334433 3444444555555554432 2211
Q ss_pred -----------------------------------------------EEEeecc----------CCeEEEEecCC-CEEE
Q 010754 351 -----------------------------------------------QQFEFHS----------GPTLDVDWRNN-VSFA 372 (502)
Q Consensus 351 -----------------------------------------------~~~~~~~----------~~v~~v~~~~~-~~~~ 372 (502)
..+.... .....+.++++ ..++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ly 269 (361)
T 2oiz_A 190 SRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMY 269 (361)
T ss_dssp EECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEE
T ss_pred ccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEE
Confidence 1110000 00001445554 4444
Q ss_pred EEeC-----------CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC--eeEEEeccC
Q 010754 373 TSST-----------DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDLREH 439 (502)
Q Consensus 373 ~~~~-----------d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~--~~~~~~~~h 439 (502)
++.. .+.|.+||+.+++.+.++..+. +.+|+|+|+|++|++++. +.|.+||..++ +.+..+..+
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred EEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 4322 3589999999999999998877 999999999999998887 99999999999 999998777
Q ss_pred CCcEEEEEEccCCC
Q 010754 440 SKEIYTIRWSPTGS 453 (502)
Q Consensus 440 ~~~i~~v~~sp~g~ 453 (502)
......++++|+|.
T Consensus 347 G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 347 AEASLQVQFHPVGG 360 (361)
T ss_dssp CSSEEEEEECCCSC
T ss_pred CCCcEEEEecCCCC
Confidence 77889999999985
No 177
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.66 E-value=1.5e-15 Score=148.66 Aligned_cols=214 Identities=9% Similarity=-0.042 Sum_probs=142.4
Q ss_pred eEEEEEcCCCCeEEEEeCC---CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 218 VCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~d---g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
+..++|+|+|++|+.++.. ..|.+|++.+++... +. .........+.|+|+|+.|+.++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~--------------l~---~~~~~~~~~~~~spdg~~l~~~~~ 100 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ--------------LT---EGKGDNTFGGFISTDERAFFYVKN 100 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE--------------CC---CSSCBCTTTCEECTTSSEEEEEET
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE--------------ee---cCCCCccccceECCCCCEEEEEEc
Confidence 7788999999998877553 368888887754211 10 011112233789999999999999
Q ss_pred CCeEEEEECCCceEEEe-cCccCCeEE-------------------EEEecCCCEEEEE-----ecCCeEEEEEcCCCce
Q 010754 295 DGQARIWSTNGDLKCTL-SKHKGPIFS-------------------LKWNKKGDYLLTG-----SCDKTAIVWDVKTEEW 349 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~-~~~~~~v~~-------------------l~~~~~~~~l~s~-----~~d~~i~~wd~~~~~~ 349 (502)
++.|++|++.+.....+ ..+...... +.|+|+++.++.+ ..+..|++||+.+++.
T Consensus 101 ~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~ 180 (396)
T 3c5m_A 101 ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGEL 180 (396)
T ss_dssp TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCE
T ss_pred CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcE
Confidence 99999999876543333 223322222 3467777766544 3567899999998876
Q ss_pred EEEEeeccCCeEEEEecC-CC-EEEEEeCC------CeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCCCEEEEEeCC
Q 010754 350 KQQFEFHSGPTLDVDWRN-NV-SFATSSTD------NMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 350 ~~~~~~~~~~v~~v~~~~-~~-~~~~~~~d------~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g~~las~s~d 419 (502)
.... .+...+..+.|++ ++ .++..+.+ ..|.+|++..+... .+..+ ...+..++|+|+|++|+.++.+
T Consensus 181 ~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 181 EVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred Eeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCccccceEECCCCCEEEEEecC
Confidence 5544 4666788999988 44 46555543 46888998765533 33323 2358889999999988777554
Q ss_pred -----CcEEEEECCCCeeEEEeccCCCcEEEEEEcc-CCC
Q 010754 420 -----VTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGS 453 (502)
Q Consensus 420 -----g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp-~g~ 453 (502)
+.|++||+.+++...... .. ... +.|+| +|.
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~ 295 (396)
T 3c5m_A 259 KGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGS 295 (396)
T ss_dssp TTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSS
T ss_pred CCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCc
Confidence 449999998886543322 11 133 89999 987
No 178
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=4.4e-14 Score=130.60 Aligned_cols=234 Identities=9% Similarity=-0.032 Sum_probs=159.5
Q ss_pred ceEEEEEcCCCCeEE-EEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 217 EVCACAWSPAGSLLA-SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~-sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
...+++++|+|++++ +.+.++.|.+|+..+..... . .......+.+++++++|+++++.. +
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~--------------~---~~~~~~~p~~i~~~~~g~l~v~~~-~ 86 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV--------------L---PFNGLYQPQGLAVDGAGTVYVTDF-N 86 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE--------------C---CCCSCCSCCCEEECTTCCEEEEET-T
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce--------------E---eeCCcCCcceeEECCCCCEEEEcC-C
Confidence 577899999999777 54678899999865432110 0 011224578899999999666555 8
Q ss_pred CeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEE-EE
Q 010754 296 GQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF-AT 373 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~-~~ 373 (502)
+.|.+||..+.....+.. ....+.+++++++|+.+++...++.|.+|+..+.............+..+++.+++.+ ++
T Consensus 87 ~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 87 NRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp TEEEEECTTCSCCEECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEE
T ss_pred CEEEEEeCCCceEeeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEE
Confidence 899999988765554432 2356899999999997777777899999986655433222222235677888765554 44
Q ss_pred EeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 374 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 374 ~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
...++.|.+|+............+...+.+|+++++|.++++...++.|.+|+............+...+.+++++|+|.
T Consensus 167 ~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 167 DTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp EGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred ECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence 45678999999877654433333446789999999998888888889999999876554432223345689999999987
Q ss_pred CCCCCCccEEEEeecCceEEEE
Q 010754 454 GTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 454 ~~~~~~~~l~las~~~~~~iw~ 475 (502)
.++..+.++.+.++.
T Consensus 247 -------l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 247 -------VYVADRGNDRVVKLT 261 (270)
T ss_dssp -------EEEEEGGGTEEEEEC
T ss_pred -------EEEEECCCCEEEEEc
Confidence 333334445555553
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=2.1e-15 Score=147.64 Aligned_cols=260 Identities=9% Similarity=-0.042 Sum_probs=160.2
Q ss_pred ceEEeccCCCc-eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCC--CCeEEEEEC
Q 010754 207 DVTILEGHTSE-VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS--KDVTTLDWN 283 (502)
Q Consensus 207 ~~~~l~~H~~~-V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~l~~s 283 (502)
....+..+... ...+.|+|+|++|+.++.++.|.+|++.+++..........-...-..+........ .....+.|+
T Consensus 71 ~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~s 150 (396)
T 3c5m_A 71 QAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQ 150 (396)
T ss_dssp EEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCC
T ss_pred cEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccC
Confidence 34444444443 334889999999999999999999999876532110000000000000000000000 000013578
Q ss_pred CCCCEEEEE-----ECCCeEEEEECCCceEEEecCccCCeEEEEEec-CCCEEEEEecC------CeEEEEEcCCCceEE
Q 010754 284 GEGTLLATG-----SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCD------KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 284 ~~g~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d------~~i~~wd~~~~~~~~ 351 (502)
|+++.++.+ ..+..|.+||+.+.....+..+...+..+.|+| ++..|+.++.+ ..|.+||+.++....
T Consensus 151 pdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~ 230 (396)
T 3c5m_A 151 PLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK 230 (396)
T ss_dssp CCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE
T ss_pred CCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE
Confidence 888877655 356789999988765555556777899999999 78877766543 468889987665333
Q ss_pred EEeec-cCCeEEEEecCCCE-EEEEeCC-----CeEEEEEcCCCcceEEEecCCCcEEEEEEcC-CCCEEEEEe------
Q 010754 352 QFEFH-SGPTLDVDWRNNVS-FATSSTD-----NMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCS------ 417 (502)
Q Consensus 352 ~~~~~-~~~v~~v~~~~~~~-~~~~~~d-----~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp-~g~~las~s------ 417 (502)
..... ...+..+.|++++. ++..+.+ +.|++||+.+++...... ... .. +.|+| +|++|++++
T Consensus 231 l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~~-~~-~~~s~~dg~~l~~~~~~~p~~ 307 (396)
T 3c5m_A 231 IKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV-MPP-CS-HLMSNFDGSLMVGDGCDAPVD 307 (396)
T ss_dssp SSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE-CCS-EE-EEEECSSSSEEEEEECCC---
T ss_pred eeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee-CCC-CC-CCccCCCCceEEEecCCccee
Confidence 22211 22477789988765 5555433 459999998876543332 212 33 89999 999988765
Q ss_pred ----------CCCcEEEEECCCCeeEEEeccCCC-----------cEEEEEEccCCCCCCCCCccEEEEee-cCceEEEE
Q 010754 418 ----------DDVTAKIWNMKQDKYVHDLREHSK-----------EIYTIRWSPTGSGTNNPNQQLILARL-IPYFLYWI 475 (502)
Q Consensus 418 ----------~dg~i~iwd~~~~~~~~~~~~h~~-----------~i~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~ 475 (502)
.++.|++||+.+++.. .+..+.. .+..++|+|+|. .++.++. ++...+|.
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~-------~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 308 VADADSYNIENDPFLYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD-------GVLFTSDFEGVPAIYI 379 (396)
T ss_dssp -------CCCCCCEEEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS-------EEEEEECTTSSCEEEE
T ss_pred eccccccccCCCCcEEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCC-------eEEEEecCCCCceEEE
Confidence 3478999999887753 3444443 256789999997 5665554 45667776
Q ss_pred ee
Q 010754 476 CS 477 (502)
Q Consensus 476 ~~ 477 (502)
.+
T Consensus 380 ~~ 381 (396)
T 3c5m_A 380 AD 381 (396)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=7e-14 Score=134.38 Aligned_cols=218 Identities=13% Similarity=0.076 Sum_probs=150.1
Q ss_pred ceEEEEEcCCCCeEEEEe---------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 217 EVCACAWSPAGSLLASGS---------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+...++ +|+.++... .++.|.+|++.+++.. . + ..+..++|+|||+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-----------~---l--------~~~~~~~~SpDg~ 71 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARR-----------F---I--------ENATMPRISPDGK 71 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-----------E---E--------ESCEEEEECTTSS
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceE-----------E---c--------ccCCCeEECCCCC
Confidence 4566677 888777642 2567899998875421 1 1 2478999999999
Q ss_pred EEEEEECC---C--eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC--------------------------
Q 010754 288 LLATGSYD---G--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-------------------------- 336 (502)
Q Consensus 288 ~l~s~~~d---g--~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-------------------------- 336 (502)
.|+.++.+ + .|.+|++.+.....+..+.. +..++|+|+|+.|+.++.+
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGE 150 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------C
T ss_pred EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCc
Confidence 99888754 3 47778887665555544444 9999999999999887643
Q ss_pred -CeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCC------C-eEEEEEcCCCcceEEEecCCCcEEEEEEcC
Q 010754 337 -KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD------N-MIYVCKIGENRPIKTFAGHQGEVNCVKWDP 408 (502)
Q Consensus 337 -~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d------~-~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp 408 (502)
..|++||+.+++.+..+.. . .+..+.|++++.++++..+ . ...+|.+.+++ ...+..+ ..+..+ +|
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--sp 224 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DS 224 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EE
T ss_pred cceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CC
Confidence 5799999998887455554 3 7888999998844444433 1 33444443444 3444444 555554 99
Q ss_pred CCCEEEEEeCC--------CcEEEEECCCCeeEEEeccCCCcEEE-EEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 409 TGSLLASCSDD--------VTAKIWNMKQDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 409 ~g~~las~s~d--------g~i~iwd~~~~~~~~~~~~h~~~i~~-v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|++|+.++.+ ..|.+|| +++.......|...+.. +.|+ +| .+++++.++..++| ..
T Consensus 225 dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg--------~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 225 DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK--------VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE--------EEEEEEETTEEEEE-EE
T ss_pred CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc--------EEEEEecCCcEEEE-Ec
Confidence 99998887754 3688888 66655555566778886 9998 64 35667777888888 64
No 181
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=2.6e-14 Score=152.01 Aligned_cols=225 Identities=13% Similarity=0.162 Sum_probs=151.8
Q ss_pred eEEeccCCCc-----eEEEEEcCCCCeEEEEeCC---------CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccC
Q 010754 208 VTILEGHTSE-----VCACAWSPAGSLLASGSGD---------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK 273 (502)
Q Consensus 208 ~~~l~~H~~~-----V~~~~~~p~~~~l~sgs~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (502)
...+.+|... ...++|||||++|+.++.+ +.+.+||+.+++... ...+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~------------------l~~~ 110 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT------------------EERI 110 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC------------------SSCC
T ss_pred EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE------------------cccC
Confidence 4556666643 2347899999999999876 556799999875321 1223
Q ss_pred CCCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEec--CccCCe-----------------EEEEEecCCCEEEEEe
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS--KHKGPI-----------------FSLKWNKKGDYLLTGS 334 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~--~~~~~v-----------------~~l~~~~~~~~l~s~~ 334 (502)
...+...+|||||+.||.+. ++.|++|+..+.....+. ++...+ ..+.|||||++|+.++
T Consensus 111 ~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 111 PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 45699999999999999885 689999998754433332 332222 3589999999999875
Q ss_pred cCC------------------------------------eEEEEEcCC---Cc--eEEEEee------ccCCeEEEEecC
Q 010754 335 CDK------------------------------------TAIVWDVKT---EE--WKQQFEF------HSGPTLDVDWRN 367 (502)
Q Consensus 335 ~d~------------------------------------~i~~wd~~~---~~--~~~~~~~------~~~~v~~v~~~~ 367 (502)
.|. +|++||+.+ ++ ....+.. +...+..+.|+|
T Consensus 190 ~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wsp 269 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWAT 269 (740)
T ss_dssp EECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEE
T ss_pred EcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeC
Confidence 332 588899988 73 2233332 556688999999
Q ss_pred CCEEEE-Ee----CCCeEEEEEcCCCc----c--eEEE--ecCCCcEE-----EEEEcCCCCEEE-EEeC-CC--cEEEE
Q 010754 368 NVSFAT-SS----TDNMIYVCKIGENR----P--IKTF--AGHQGEVN-----CVKWDPTGSLLA-SCSD-DV--TAKIW 425 (502)
Q Consensus 368 ~~~~~~-~~----~d~~i~i~d~~~~~----~--~~~~--~~h~~~i~-----~l~~sp~g~~la-s~s~-dg--~i~iw 425 (502)
++.+++ .. .+..|++||+.+++ + +..+ .+|...|. .+.|+|||+.|+ ..+. +| .|++|
T Consensus 270 dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~ 349 (740)
T 4a5s_A 270 QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYF 349 (740)
T ss_dssp TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEE
T ss_pred CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEE
Confidence 887433 22 23479999999887 1 2222 45665554 789999999877 6664 33 58889
Q ss_pred ECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 426 NMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 426 d~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
|+.+++.. .+....-.+..+.+ +||.
T Consensus 350 ~~~~~~~~-~lT~g~~~v~~~~~-~d~~ 375 (740)
T 4a5s_A 350 QIDKKDCT-FITKGTWEVIGIEA-LTSD 375 (740)
T ss_dssp ETTCSSCE-ESCCSSSCEEEEEE-ECSS
T ss_pred ECCCCceE-ecccCCEEEEEEEE-EeCC
Confidence 98876654 34434445666543 4444
No 182
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.62 E-value=1.9e-13 Score=127.56 Aligned_cols=198 Identities=13% Similarity=0.146 Sum_probs=145.7
Q ss_pred cCCCceEEEEE-cCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 213 GHTSEVCACAW-SPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 213 ~H~~~V~~~~~-~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+|...+.++++ .+++.++++... ++.|.+|+ .+++.. ..+. ..+...+.+++++++|++++
T Consensus 74 ~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~-------------~~~~---~~~~~~~~~i~~~~~g~l~v 136 (286)
T 1q7f_A 74 SQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFV-------------RKFG---ATILQHPRGVTVDNKGRIIV 136 (286)
T ss_dssp TCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEE-------------EEEC---TTTCSCEEEEEECTTSCEEE
T ss_pred ccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEE-------------EEec---CccCCCceEEEEeCCCCEEE
Confidence 35567899999 567777777643 78999999 444321 1111 11234689999999999888
Q ss_pred EEECCCeEEEEECCCceEEEec--CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec--cCCeEEEEec
Q 010754 291 TGSYDGQARIWSTNGDLKCTLS--KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--SGPTLDVDWR 366 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~v~~v~~~ 366 (502)
+...++.|.+|+.++.....+. .+...+.+++++++|+.+++...++.|++||. .++.+..+... ...+..+++.
T Consensus 137 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 137 VECKVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp EETTTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEEC
T ss_pred EECCCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEEC
Confidence 8778899999998877666653 34456899999999987777778999999997 45666666543 2568889997
Q ss_pred CCCEEEEE-eCCC-eEEEEEcCCCcceEEEecCCC--cEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 367 NNVSFATS-STDN-MIYVCKIGENRPIKTFAGHQG--EVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 367 ~~~~~~~~-~~d~-~i~i~d~~~~~~~~~~~~h~~--~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
+++.++++ ..++ .|.+|+. .++.+..+..+.. .+.+++++|+|+++++ +.|+.|++|++...
T Consensus 216 ~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 216 SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 76655544 4554 9999995 5666677765533 4789999999987777 57899999997654
No 183
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.62 E-value=1.2e-12 Score=123.67 Aligned_cols=227 Identities=9% Similarity=0.108 Sum_probs=157.6
Q ss_pred EeccCCCceEEEEEcCCCCeEEE-------EeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE
Q 010754 210 ILEGHTSEVCACAWSPAGSLLAS-------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 282 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~~l~s-------gs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~ 282 (502)
.+...-....+++|++++.++++ +..++.|.+|+..+++... ... ....++...+.++++
T Consensus 12 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~-----------~~~--~~~~~~~~~~~~i~~ 78 (314)
T 1pjx_A 12 KVTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTV-----------ICK--PEVNGYGGIPAGCQC 78 (314)
T ss_dssp EEECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEE-----------EEC--CEETTEECCEEEEEE
T ss_pred hhhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEE-----------EEe--cccCCCCCCCceEEE
Confidence 34444556789999999988887 5678899999987665210 000 000112346899999
Q ss_pred CCC-CCEEEEEECCCeEEEEECCCceEEEe-cC-----ccCCeEEEEEecCCCEEEEEecC---------------CeEE
Q 010754 283 NGE-GTLLATGSYDGQARIWSTNGDLKCTL-SK-----HKGPIFSLKWNKKGDYLLTGSCD---------------KTAI 340 (502)
Q Consensus 283 s~~-g~~l~s~~~dg~i~iwd~~~~~~~~~-~~-----~~~~v~~l~~~~~~~~l~s~~~d---------------~~i~ 340 (502)
+++ |+++++ +..+.|.+||.++. ...+ .. ....+.+++++++|+.+++...+ +.|.
T Consensus 79 ~~~~g~l~v~-~~~~~l~~~d~~g~-~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~ 156 (314)
T 1pjx_A 79 DRDANQLFVA-DMRLGLLVVQTDGT-FEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIY 156 (314)
T ss_dssp CSSSSEEEEE-ETTTEEEEEETTSC-EEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEE
T ss_pred ecCCCcEEEE-ECCCCEEEEeCCCC-EEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEE
Confidence 999 665554 44557999998844 3333 21 12357899999999887776655 5777
Q ss_pred EEEcCCCceEEEEeeccCCeEEEEec----CCC-EEE-EEeCCCeEEEEEcC-CCc-----ceEEEecCC-CcEEEEEEc
Q 010754 341 VWDVKTEEWKQQFEFHSGPTLDVDWR----NNV-SFA-TSSTDNMIYVCKIG-ENR-----PIKTFAGHQ-GEVNCVKWD 407 (502)
Q Consensus 341 ~wd~~~~~~~~~~~~~~~~v~~v~~~----~~~-~~~-~~~~d~~i~i~d~~-~~~-----~~~~~~~h~-~~i~~l~~s 407 (502)
.||.. ++... +.........+.|. +++ .++ +...++.|.+|+.. .+. ....+.++. ..+..++++
T Consensus 157 ~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d 234 (314)
T 1pjx_A 157 CFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFD 234 (314)
T ss_dssp EECTT-SCEEE-EEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEB
T ss_pred EECCC-CCEEE-eccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEEC
Confidence 88765 55433 33334456788888 876 344 44567899999986 443 222333343 568899999
Q ss_pred CCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 408 PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 408 p~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
++|+++++...++.|.+||..+++.+..+..+...+.+++|+|+|.
T Consensus 235 ~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 235 EDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTK 280 (314)
T ss_dssp TTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred CCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCC
Confidence 9999998888889999999987887777776767899999999986
No 184
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.61 E-value=3.3e-13 Score=128.87 Aligned_cols=206 Identities=9% Similarity=0.081 Sum_probs=155.9
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCC-ccCCCCCCCceeEEEee--ecCccccCCCCeEEEEECC-CCCE
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT-SNGGAQNGPLNVLVLKH--VKGRTNEKSKDVTTLDWNG-EGTL 288 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~v~~l~~s~-~g~~ 288 (502)
++......++++|+|+++++.+.++.|++|+..... ... .+.. .......+......++++| +|.+
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~----------~~~~~~~~g~~~~~~~~P~~ia~~~~~g~l 157 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLL----------ILGRSMQPGSDQNHFCQPTDVAVEPSTGAV 157 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSE----------EESBTTBCCCSTTCCSSEEEEEECTTTCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEE----------EecccCCCCCCccccCCCcEEEEeCCCCeE
Confidence 455678999999999999999889999999976432 111 0000 0011122344689999999 7888
Q ss_pred EEEEE-CCCeEEEEECCCceEEEecC----------ccCCeEEEEEecC-CCEEEEEecCCeEEEEEcCCCceEEEEee-
Q 010754 289 LATGS-YDGQARIWSTNGDLKCTLSK----------HKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEF- 355 (502)
Q Consensus 289 l~s~~-~dg~i~iwd~~~~~~~~~~~----------~~~~v~~l~~~~~-~~~l~s~~~d~~i~~wd~~~~~~~~~~~~- 355 (502)
+++.+ .++.|++|+.++.....+.. +-.....|+++|+ +..+++...++.|++||..+++.+..+..
T Consensus 158 yv~d~~~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~ 237 (329)
T 3fvz_A 158 FVSDGYCNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHA 237 (329)
T ss_dssp EEEECSSCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCT
T ss_pred EEEeCCCCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEecc
Confidence 88876 68999999988887776643 2234899999998 66777777889999999998998888743
Q ss_pred -ccCCeEEEEecCCCEEEEEe-------CCCeEEEEEcCCCcceEEEe---cCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q 010754 356 -HSGPTLDVDWRNNVSFATSS-------TDNMIYVCKIGENRPIKTFA---GHQGEVNCVKWDPTGSLLASCSDDVTAKI 424 (502)
Q Consensus 356 -~~~~v~~v~~~~~~~~~~~~-------~d~~i~i~d~~~~~~~~~~~---~h~~~i~~l~~sp~g~~las~s~dg~i~i 424 (502)
+...+..+.+.|+..+++.+ .+..|++|+..+++.+..+. ++...+..|+++|+|.++++...++.|++
T Consensus 238 ~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 238 SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSEEEEEESSSCCEEE
T ss_pred ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCCEEEEECCCCEEEE
Confidence 45568889998833333332 24489999999999888873 56778999999999988888889999999
Q ss_pred EECC
Q 010754 425 WNMK 428 (502)
Q Consensus 425 wd~~ 428 (502)
|++.
T Consensus 318 ~~~~ 321 (329)
T 3fvz_A 318 FTLT 321 (329)
T ss_dssp EEEE
T ss_pred EeCC
Confidence 9975
No 185
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.58 E-value=5.7e-13 Score=123.49 Aligned_cols=207 Identities=13% Similarity=0.117 Sum_probs=159.7
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 305 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~ 305 (502)
.+++|++++.|+.|.+||..+++... .+... ....+.++.++|+|++++ +.++.|..||.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w-------------~~~~~---~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G 65 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW-------------EYPLE---KGWECNSVAATKAGEILF--SYSKGAKMITRDG 65 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE-------------EEECC---TTCCCCEEEECTTSCEEE--ECBSEEEEECTTS
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE-------------EeCCC---ccCCCcCeEECCCCCEEE--eCCCCEEEECCCC
Confidence 46789999999999999998876422 11111 013578899999999888 4578899999988
Q ss_pred ceEEEecCc-cCCeEEEEEecCCCEEEEEec-CCeEEEEEcCCCceEEEEeecc------CCeEEEEecC-CCEEEEEeC
Q 010754 306 DLKCTLSKH-KGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHS------GPTLDVDWRN-NVSFATSST 376 (502)
Q Consensus 306 ~~~~~~~~~-~~~v~~l~~~~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~------~~v~~v~~~~-~~~~~~~~~ 376 (502)
+.+..+..+ ...+.++.+.++|+++++.+. ++.|..+|. +++.+..+.... .....+...+ ++.+++...
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~ 144 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFA 144 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETT
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecC
Confidence 888888765 347889999999999999887 788888885 788777775322 1233344444 455777778
Q ss_pred CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC------CcEEEEEEcc
Q 010754 377 DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS------KEIYTIRWSP 450 (502)
Q Consensus 377 d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~------~~i~~v~~sp 450 (502)
++.|..||.. ++.+.++... ..+.++.+.++|+++++++.++.|..+|..+++.+..+..+. ..+..++..+
T Consensus 145 ~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~ 222 (276)
T 3no2_A 145 TSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQ 222 (276)
T ss_dssp TTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECT
T ss_pred CCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcC
Confidence 9999999998 9999888765 456677889999999999999999999999999998886432 2278888899
Q ss_pred CCC
Q 010754 451 TGS 453 (502)
Q Consensus 451 ~g~ 453 (502)
+|.
T Consensus 223 ~G~ 225 (276)
T 3no2_A 223 NGG 225 (276)
T ss_dssp TSC
T ss_pred CCC
Confidence 887
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.58 E-value=5.8e-13 Score=125.00 Aligned_cols=207 Identities=11% Similarity=0.059 Sum_probs=149.2
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
...+..+...+.+++++|+|+++++...++.|.+|+..+++... . .... .......+..++++|+|+
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~---------~-~~~~---~~~~~~~~~~i~~d~~G~ 127 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWES---------I-ADSF---EGKKLNSPNDVCLAPDGS 127 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEE---------E-ECEE---TTEECCCCCCEEECTTSC
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEE---------E-eecc---CCCCCCCCCCEEECCCCC
Confidence 55666777889999999999988888778899999987665211 0 0000 011123577899999999
Q ss_pred EEEEE----E-------------CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC-CCce
Q 010754 288 LLATG----S-------------YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEW 349 (502)
Q Consensus 288 ~l~s~----~-------------~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~-~~~~ 349 (502)
++++. + ..+.|..++..+. ...+..+......++|+|+++.+++.+.++.|.+||+. ++..
T Consensus 128 l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~ 206 (296)
T 3e5z_A 128 LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGT-LSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGET 206 (296)
T ss_dssp EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSC-EEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCE
T ss_pred EEEECCccccccccccccccccCCCcEEEEECCCCC-EEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcC
Confidence 88873 3 1346666666643 34445566677999999999988777778999999986 5554
Q ss_pred ---EEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEE-cCCCCEEEEEeCCCcEEEE
Q 010754 350 ---KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW-DPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 350 ---~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~-sp~g~~las~s~dg~i~iw 425 (502)
...+..+...+..+++.+++.+.++. ++.|.+|+.. ++.+..+..+.. +++++| +|+++.|++++.++ +.-+
T Consensus 207 ~~~~~~~~~~~~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~~~ 282 (296)
T 3e5z_A 207 EYQGVHFTVEPGKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FWSI 282 (296)
T ss_dssp EEEEEEECCSSSCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EEEE
T ss_pred cCCCeEeeCCCCCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EEEE
Confidence 23332344456678888877777777 8999999986 777788887777 999999 68999998888764 5555
Q ss_pred ECCCCee
Q 010754 426 NMKQDKY 432 (502)
Q Consensus 426 d~~~~~~ 432 (502)
+..+.++
T Consensus 283 ~~~~~~~ 289 (296)
T 3e5z_A 283 ETNVRGL 289 (296)
T ss_dssp ECSCCBC
T ss_pred Ecccccc
Confidence 6666554
No 187
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.57 E-value=3.9e-13 Score=130.01 Aligned_cols=212 Identities=10% Similarity=0.095 Sum_probs=136.5
Q ss_pred CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC----------CCeEEEEECC
Q 010754 235 GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----------DGQARIWSTN 304 (502)
Q Consensus 235 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~----------dg~i~iwd~~ 304 (502)
.|+.|.+||..+++... .+.. ... - .++|+|+|++++++.. ++.|.+||..
T Consensus 29 ~d~~v~v~D~~t~~~~~-------------~i~~----g~~-p-~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~ 89 (361)
T 2oiz_A 29 TESRVHVYDYTNGKFLG-------------MVPT----AFN-G-HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDAD 89 (361)
T ss_dssp GGCEEEEEETTTCCEEE-------------EEEC----CEE-E-EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETT
T ss_pred ccCeEEEEECCCCeEEE-------------EecC----CCC-C-ceEECCCCCEEEEEEecccccccCCCCCEEEEEECc
Confidence 37899999988765321 1111 112 2 8999999999999873 5789999986
Q ss_pred C-ceEEEecC------ccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEE-EeeccCCeEEEEecC--CCEEE
Q 010754 305 G-DLKCTLSK------HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRN--NVSFA 372 (502)
Q Consensus 305 ~-~~~~~~~~------~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~-~~~~~~~v~~v~~~~--~~~~~ 372 (502)
. +....+.. +......++++|+|++|+++.. +++|.+||+.+++.+.. +... ....+.+.| ...++
T Consensus 90 t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~--~~~~v~~~p~~~~~~~ 167 (361)
T 2oiz_A 90 KLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA--GCWSVIPQPNRPRSFM 167 (361)
T ss_dssp TCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT--TEEEEEECTTSSSEEE
T ss_pred CCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC--CcceeEEcCCCCeeEE
Confidence 4 44444432 2245678999999999998874 58999999999987766 3211 111111222 12344
Q ss_pred EEeCCCeEEE------------------------------------------------EEcCCCcc--eEEEec------
Q 010754 373 TSSTDNMIYV------------------------------------------------CKIGENRP--IKTFAG------ 396 (502)
Q Consensus 373 ~~~~d~~i~i------------------------------------------------~d~~~~~~--~~~~~~------ 396 (502)
+.+.||.+.+ +|+..... +..+..
T Consensus 168 ~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~ 247 (361)
T 2oiz_A 168 TICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDK 247 (361)
T ss_dssp EEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHH
T ss_pred EECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCcccc
Confidence 4444444444 44432211 111110
Q ss_pred CC----CcEEEEEEcCCCCEEEEEeC-----------CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCcc
Q 010754 397 HQ----GEVNCVKWDPTGSLLASCSD-----------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 461 (502)
Q Consensus 397 h~----~~i~~l~~sp~g~~las~s~-----------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~ 461 (502)
+. .....++|+|+++.++.+.. .+.|.+||+.+++.+..+..+. +.+++|+|||+ .
T Consensus 248 ~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~-------~ 318 (361)
T 2oiz_A 248 AKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN-------L 318 (361)
T ss_dssp HTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT-------E
T ss_pred ccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC-------E
Confidence 00 00112688999887766543 3479999999999999998776 89999999998 6
Q ss_pred EEEEeecCceEEEEee
Q 010754 462 LILARLIPYFLYWICS 477 (502)
Q Consensus 462 l~las~~~~~~iw~~~ 477 (502)
+++++. +.+.+|+..
T Consensus 319 l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 319 MLTLDG-GNVNVYDIS 333 (361)
T ss_dssp EEEECS-SCEEEEECS
T ss_pred EEEeCC-CeEEEEECC
Confidence 666655 889999743
No 188
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.57 E-value=2.4e-13 Score=129.94 Aligned_cols=230 Identities=10% Similarity=0.055 Sum_probs=158.1
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.+++|+|++..++..+.++.++.|.- .. ...+ ..+...+.+++|+++|++++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------~~~~----~~~~~~~~~~~~~~~g~l~~~~~~~ 65 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITA---EP-------------WLEI----SKKGLQLEGLNFDRQGQLFLLDVFE 65 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEEC---EE-------------EEEE----ESSCCCEEEEEECTTSCEEEEETTT
T ss_pred cccceeeecCCccceeEEeecccCccccc---ce-------------eEEE----eccCccccCcEECCCCCEEEEECCC
Confidence 34677889988877777778888888831 10 0111 1223457899999999988888889
Q ss_pred CeEEEEECCCceEEEe-cCccCCeEEEEEecCCCEEEEEecC----CeEEEEEcCCCceEEEEe--eccCCeEEEEecCC
Q 010754 296 GQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNN 368 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~s~~~d----~~i~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~ 368 (502)
+.|.+||..+.....+ ..+...+.+++|+|+|+++++...+ +.|.+||..++.....+. .....+.++.+.++
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 9999999876544433 3566789999999999887777666 689999998877654333 23346889999888
Q ss_pred CEEEEEeCC-------CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEE-EEeCCCcEEEEECCC-CeeEE-----
Q 010754 369 VSFATSSTD-------NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQ-DKYVH----- 434 (502)
Q Consensus 369 ~~~~~~~~d-------~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~la-s~s~dg~i~iwd~~~-~~~~~----- 434 (502)
+.++.+... +.|+.++..+++.. .+..+...+..++|+|+|++|+ +.+.++.|++||+.+ +..+.
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce
Confidence 776666553 56666666554433 3333345688999999998654 455678999999864 33222
Q ss_pred ---EeccCCCcEEEEEEccCCCCCCCCCccEEEEe-ecCceEEEE
Q 010754 435 ---DLREHSKEIYTIRWSPTGSGTNNPNQQLILAR-LIPYFLYWI 475 (502)
Q Consensus 435 ---~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-~~~~~~iw~ 475 (502)
.+.++ ..+..++++++|. +++++ .++.+.+|.
T Consensus 225 ~~~~~~~~-~~~~~i~~d~~G~--------l~v~~~~~~~v~~~d 260 (333)
T 2dg1_A 225 IPYYFTGH-EGPDSCCIDSDDN--------LYVAMYGQGRVLVFN 260 (333)
T ss_dssp EEEECCSS-SEEEEEEEBTTCC--------EEEEEETTTEEEEEC
T ss_pred EEEecCCC-CCCCceEECCCCC--------EEEEEcCCCEEEEEC
Confidence 11222 3678899999987 34443 346677775
No 189
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.56 E-value=2.5e-11 Score=113.56 Aligned_cols=237 Identities=8% Similarity=-0.046 Sum_probs=166.6
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
+..+...+.++++.++|.++++...++.|.+|+.. +... . ... ......+.+++++++|.+++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~-----------~---~~~--~~~~~~~~~i~~~~~g~l~v 72 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKIT-----------E---YPL--PTPDAKVMCLTISSDGEVWF 72 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEE-----------E---EEC--SSTTCCEEEEEECTTSCEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeE-----------E---ecC--CcccCceeeEEECCCCCEEE
Confidence 33455779999999999988877668899999976 4311 0 000 01235689999999999888
Q ss_pred EEECCCeEEEEECCCceEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE-eeccCCeEEEEecCC
Q 010754 291 TGSYDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDWRNN 368 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~-~~~~~~v~~v~~~~~ 368 (502)
+...++.|..|+..+..... +......+.++++.+++..+++...++.|.+||. +++..... ......+..+.+.++
T Consensus 73 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 73 TENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp EETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred eCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 87778999999987543222 2224557899999999988887777889999998 55544322 123456788888876
Q ss_pred CEEEEEe-CCCeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE-eccCCCcEEE
Q 010754 369 VSFATSS-TDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYT 445 (502)
Q Consensus 369 ~~~~~~~-~d~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~-~~~h~~~i~~ 445 (502)
+.+..+. .++.|..||. +++.... +..+...+.+++++++|+++++...++.|.+||. +++.... +..+...+.+
T Consensus 152 g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~ 229 (299)
T 2z2n_A 152 NALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHA 229 (299)
T ss_dssp SCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEE
T ss_pred CCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCcee
Confidence 6655544 5689999998 5554332 2334456889999999998887777889999998 6664332 2334567899
Q ss_pred EEEccCCCCCCCCCccEEEEe-ecCceEEEE
Q 010754 446 IRWSPTGSGTNNPNQQLILAR-LIPYFLYWI 475 (502)
Q Consensus 446 v~~sp~g~~~~~~~~~l~las-~~~~~~iw~ 475 (502)
++++++|. ++++. .++.+.+|.
T Consensus 230 i~~~~~g~--------l~v~~~~~~~i~~~d 252 (299)
T 2z2n_A 230 ITAGAGID--------LWFTEWGANKIGRLT 252 (299)
T ss_dssp EEECSTTC--------EEEEETTTTEEEEEE
T ss_pred EEECCCCC--------EEEeccCCceEEEEC
Confidence 99999987 34443 345566665
No 190
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.56 E-value=1.4e-13 Score=132.31 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=134.0
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCce-----------EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEc
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDL-----------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 344 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~ 344 (502)
.+..+++++...++++|+.++ +.+|+++.-. ......+.. |+.|+| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 589999999999999999875 5559843111 111223556 999999 88999998 8899999999
Q ss_pred CCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEE
Q 010754 345 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 424 (502)
Q Consensus 345 ~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~i 424 (502)
++.........+...+.++.+.+.. ++++..||.|.+||+.++.... +...|+|++|||+| ++.|..||++++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 8877766777788888888886654 8889999999999999877643 44679999999999 678999999999
Q ss_pred EECCCCee--EEEe------c---cCCCcEEEEEEccCCC
Q 010754 425 WNMKQDKY--VHDL------R---EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 425 wd~~~~~~--~~~~------~---~h~~~i~~v~~sp~g~ 453 (502)
|+...+.+ ..++ . +|...|.+|.|.+++.
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 99888775 5556 2 3778899999999876
No 191
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.56 E-value=7.8e-13 Score=140.57 Aligned_cols=221 Identities=15% Similarity=0.084 Sum_probs=152.2
Q ss_pred cCCCceEEEEEcCCCCeEEEEeCC-----CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 213 GHTSEVCACAWSPAGSLLASGSGD-----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 213 ~H~~~V~~~~~~p~~~~l~sgs~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+|...+..++|||||++||.++.+ .+|++||+.+++... .... ...+..++|+|| +
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~---------~~~~---------~~~~~~~~wspD-~ 220 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA---------DELK---------WVKFSGLAWLGN-D 220 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE---------EEEE---------EEESCCCEESTT-S
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC---------ccCC---------CceeccEEEECC-C
Confidence 455578899999999999887654 469999999876321 0000 011357899999 9
Q ss_pred EEEEEECCCe--------------EEEEECCCce---EEEecC--ccCCeEEEEEecCCCEEEEEecCC-----eEEEEE
Q 010754 288 LLATGSYDGQ--------------ARIWSTNGDL---KCTLSK--HKGPIFSLKWNKKGDYLLTGSCDK-----TAIVWD 343 (502)
Q Consensus 288 ~l~s~~~dg~--------------i~iwd~~~~~---~~~~~~--~~~~v~~l~~~~~~~~l~s~~~d~-----~i~~wd 343 (502)
.|+.++.++. |++|++.+.. ...+.. +...+..+.|+|+|++|+..+.++ .|++||
T Consensus 221 ~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d 300 (741)
T 1yr2_A 221 ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVAR 300 (741)
T ss_dssp EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEE
T ss_pred EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEE
Confidence 9988887654 8899976432 233332 334588999999999998877544 899999
Q ss_pred cCCC--ceEEEEeeccCCeEEEEecCCCEEEEEeC----CCeEEEEEcCCC--cceEEEecCCCcEEEEEEcCCCCEEEE
Q 010754 344 VKTE--EWKQQFEFHSGPTLDVDWRNNVSFATSST----DNMIYVCKIGEN--RPIKTFAGHQGEVNCVKWDPTGSLLAS 415 (502)
Q Consensus 344 ~~~~--~~~~~~~~~~~~v~~v~~~~~~~~~~~~~----d~~i~i~d~~~~--~~~~~~~~h~~~i~~l~~sp~g~~las 415 (502)
+.++ .+...+..+........+..+..|+..+. ++.|++||+.++ .....+..+...+..+.|+ ++.++++
T Consensus 301 ~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~ 379 (741)
T 1yr2_A 301 VTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFAS 379 (741)
T ss_dssp EETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEE
T ss_pred CCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEE
Confidence 9877 41444554554455554556677776665 456999999874 3344455555567778887 6678888
Q ss_pred EeCCCcEEEEECC-CCeeEEEecc-CCCcEEEEEEccCCC
Q 010754 416 CSDDVTAKIWNMK-QDKYVHDLRE-HSKEIYTIRWSPTGS 453 (502)
Q Consensus 416 ~s~dg~i~iwd~~-~~~~~~~~~~-h~~~i~~v~~sp~g~ 453 (502)
...|+..+||.+. +++.+..+.. +.+.+..++|+|++.
T Consensus 380 ~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 380 YIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDR 419 (741)
T ss_dssp EEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCS
T ss_pred EEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCC
Confidence 8889987777654 4666666664 366789999999886
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=1.3e-11 Score=115.90 Aligned_cols=228 Identities=10% Similarity=0.095 Sum_probs=157.6
Q ss_pred ccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE
Q 010754 212 EGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 290 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~ 290 (502)
..+..-.-+..|+|+ +.++++...++.|..|+..++... .. .....+.+++++++|++++
T Consensus 9 ~~~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----------~~--------~~~~~~~~i~~~~dG~l~v 69 (297)
T 3g4e_A 9 PENCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-----------RV--------TMDAPVSSVALRQSGGYVA 69 (297)
T ss_dssp CCCCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-----------EE--------ECSSCEEEEEEBTTSSEEE
T ss_pred ccCCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-----------EE--------eCCCceEEEEECCCCCEEE
Confidence 334445668899995 567777777899999998765421 00 0134689999999999555
Q ss_pred EEECCCeEEEEECCCceEEEecCc-----cCCeEEEEEecCCCEEEEEecC---------CeEEEEEcCC-CceEEEEee
Q 010754 291 TGSYDGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSCD---------KTAIVWDVKT-EEWKQQFEF 355 (502)
Q Consensus 291 s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~s~~~d---------~~i~~wd~~~-~~~~~~~~~ 355 (502)
+ . ++.|.+||.++.....+... ...+..++++|+|+++++.... ....+|.+.. ++. ..+..
T Consensus 70 ~-~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~-~~~~~ 146 (297)
T 3g4e_A 70 T-I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHV-KKYFD 146 (297)
T ss_dssp E-E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCE-EEEEE
T ss_pred E-E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCE-EEEee
Confidence 4 4 57899999875544433221 2347889999999966654322 2334554433 333 33333
Q ss_pred ccCCeEEEEecCCCE--EEEEeCCCeEEEEEcC--CCcc-----eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 356 HSGPTLDVDWRNNVS--FATSSTDNMIYVCKIG--ENRP-----IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~--~~~~-----~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
.......++|++++. +++.+.++.|.+|++. ++.. +..+..+...+..++++++|++.++....+.|.+||
T Consensus 147 ~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d 226 (297)
T 3g4e_A 147 QVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLD 226 (297)
T ss_dssp EESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEEC
T ss_pred ccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEc
Confidence 444567899988764 4555668899999973 4432 222333446788999999999888888888999999
Q ss_pred CCCCeeEEEeccCCCcEEEEEEc-cCCCCCCCCCccEEEEeec
Q 010754 427 MKQDKYVHDLREHSKEIYTIRWS-PTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~i~~v~~s-p~g~~~~~~~~~l~las~~ 468 (502)
..+++.+..+..+...+++++|. |++. .|++++..
T Consensus 227 ~~tG~~~~~i~~p~~~~t~~~f~g~d~~-------~L~vt~~~ 262 (297)
T 3g4e_A 227 PVTGKRLQTVKLPVDKTTSCCFGGKNYS-------EMYVTCAR 262 (297)
T ss_dssp TTTCCEEEEEECSSSBEEEEEEESGGGC-------EEEEEEBC
T ss_pred CCCceEEEEEECCCCCceEEEEeCCCCC-------EEEEEcCC
Confidence 99999999888777789999998 8877 66666654
No 193
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.51 E-value=9.2e-12 Score=118.66 Aligned_cols=228 Identities=10% Similarity=0.022 Sum_probs=157.7
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
....+++. +++++++...++.|.+||..+++.+. .+. .......++++++++++++...++
T Consensus 45 ~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~-------------~i~-----~~~~p~~i~~~~~g~lyv~~~~~~ 105 (328)
T 3dsm_A 45 VAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVG-------------RIT-----GFTSPRYIHFLSDEKAYVTQIWDY 105 (328)
T ss_dssp CEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEE-------------EEE-----CCSSEEEEEEEETTEEEEEEBSCS
T ss_pred cceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEE-------------EcC-----CCCCCcEEEEeCCCeEEEEECCCC
Confidence 35667774 45566666678999999998876422 111 124588999999885444444899
Q ss_pred eEEEEECCCceE-EEecCcc-----CCeEEEEEecCCCEEEEEe--cCCeEEEEEcCCCceEEEEeeccCCeEEEEecCC
Q 010754 297 QARIWSTNGDLK-CTLSKHK-----GPIFSLKWNKKGDYLLTGS--CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 368 (502)
Q Consensus 297 ~i~iwd~~~~~~-~~~~~~~-----~~v~~l~~~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~ 368 (502)
.|.+||..+..+ ..+.... .....+++ ++..+++++ .++.|.+||..+++.+..+... .....+.+.++
T Consensus 106 ~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-~~p~~i~~~~d 182 (328)
T 3dsm_A 106 RIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG-IQPTSLVMDKY 182 (328)
T ss_dssp EEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS-SCBCCCEECTT
T ss_pred eEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-CCccceEEcCC
Confidence 999999876443 3333222 14456777 345555555 4899999999999988877653 34567788887
Q ss_pred CEEEEEeCC-----------CeEEEEEcCCCcceEEEecC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE-
Q 010754 369 VSFATSSTD-----------NMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD- 435 (502)
Q Consensus 369 ~~~~~~~~d-----------~~i~i~d~~~~~~~~~~~~h-~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~- 435 (502)
+.++.++.. +.|.++|..+++....+... ......++|+|++++|..+.. .|.+||..+++....
T Consensus 183 G~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~~~~~~ 260 (328)
T 3dsm_A 183 NKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADRVPVRP 260 (328)
T ss_dssp SEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSSCCSSC
T ss_pred CCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCceeeee
Confidence 776665543 68999999998887777533 246889999999999888765 899999988876421
Q ss_pred -eccCCCcEEEEEEccCCCCCCCCCccEEEEe-----ecCceEEEE
Q 010754 436 -LREHSKEIYTIRWSPTGSGTNNPNQQLILAR-----LIPYFLYWI 475 (502)
Q Consensus 436 -~~~h~~~i~~v~~sp~g~~~~~~~~~l~las-----~~~~~~iw~ 475 (502)
+..+......++++|++. .++++. .++.+.+|.
T Consensus 261 ~~~~~~~~p~gi~vdp~~g-------~lyva~~~~y~~~~~V~v~d 299 (328)
T 3dsm_A 261 FLEFRDTKYYGLTVNPNNG-------EVYVADAIDYQQQGIVYRYS 299 (328)
T ss_dssp SBCCCSSCEEEEEECTTTC-------CEEEEECTTSSSEEEEEEEC
T ss_pred eecCCCCceEEEEEcCCCC-------eEEEEcccccccCCEEEEEC
Confidence 122245689999999655 455554 345666664
No 194
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.50 E-value=1.4e-11 Score=121.02 Aligned_cols=216 Identities=13% Similarity=0.151 Sum_probs=150.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
.....++|+|+++++++...++.|++||..++... .+ ... ..... ++|+++++.|+++..+
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~-----------~~--~~~-----~~~~~-ia~~~~g~~l~~~d~~ 191 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVT-----------TV--HPG-----FKGGK-PAVTKDKQRVYSIGWE 191 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEE-----------EE--EET-----CCBCB-CEECTTSSEEEEEBSS
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEE-----------Ee--ecc-----CCCCc-eeEecCCCcEEEEecC
Confidence 46789999999998888888899999998875421 11 001 11233 8999999999999886
Q ss_pred C--eEEEEECCCceE-EEe----cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE----EeeccCCe-E-E
Q 010754 296 G--QARIWSTNGDLK-CTL----SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ----FEFHSGPT-L-D 362 (502)
Q Consensus 296 g--~i~iwd~~~~~~-~~~----~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~----~~~~~~~v-~-~ 362 (502)
+ .|.+|+..+... ..+ ......+.+++++|++..|+++..++.|+.||..++..... ........ . .
T Consensus 192 ~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 192 GTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp TTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred CCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 6 788888764322 222 22445678899999655666677889999999987763322 11111122 2 8
Q ss_pred EEecC-CCE-EEEEeCCCeEEEEEcCCCcceEEEecCC---------------CcEEEEEEcCCCCEEEEEe-CCCcEEE
Q 010754 363 VDWRN-NVS-FATSSTDNMIYVCKIGENRPIKTFAGHQ---------------GEVNCVKWDPTGSLLASCS-DDVTAKI 424 (502)
Q Consensus 363 v~~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~---------------~~i~~l~~sp~g~~las~s-~dg~i~i 424 (502)
++|++ ++. +++....+.|+.|+.... +..+.++. .....++++|+|+++++-+ .++.|+.
T Consensus 272 ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred EEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 88987 455 455566788999987654 44444442 3588999999999888888 8899999
Q ss_pred EECCCCeeEEEeccC---------------CCcEEEEEEccCCC
Q 010754 425 WNMKQDKYVHDLREH---------------SKEIYTIRWSPTGS 453 (502)
Q Consensus 425 wd~~~~~~~~~~~~h---------------~~~i~~v~~sp~g~ 453 (502)
|++.++.. ..+.++ -.....|+++|+|.
T Consensus 350 ~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~ 392 (409)
T 3hrp_A 350 LDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG 392 (409)
T ss_dssp EETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE
T ss_pred EECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC
Confidence 99877764 334333 23588999999976
No 195
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.49 E-value=1.3e-10 Score=108.64 Aligned_cols=219 Identities=8% Similarity=-0.018 Sum_probs=155.7
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
+...+.+++++++|.++++...++.|..|+.. +.. . ... . ......+.++++.++|+++++..
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~---------~--~~~-~----~~~~~~~~~i~~~~~g~l~v~~~ 117 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII---------K--EYT-L----PNPDSAPYGITEGPNGDIWFTEM 117 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE---------E--EEE-C----SSTTCCEEEEEECTTSCEEEEET
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE---------E--EEe-C----CCcCCCceeeEECCCCCEEEEec
Confidence 45678999999999988887778889999865 221 0 010 0 11234689999999999888877
Q ss_pred CCCeEEEEECCCceEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE-EeeccCCeEEEEecCCCEE
Q 010754 294 YDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRNNVSF 371 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~ 371 (502)
.++.|.+||..+..... .......+.++++.++|+.+++...++.|..||. +++.... .......+..+++.+++.+
T Consensus 118 ~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l 196 (299)
T 2z2n_A 118 NGNRIGRITDDGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDAL 196 (299)
T ss_dssp TTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCceEEEECCCCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCE
Confidence 78999999986544332 2334567899999999987777777889999998 6665442 1223445788888776555
Q ss_pred EEEe-CCCeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE-eccCCCcEEEEEE
Q 010754 372 ATSS-TDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRW 448 (502)
Q Consensus 372 ~~~~-~d~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~-~~~h~~~i~~v~~ 448 (502)
.++. .++.|.+|+. ++..... ...+...+.+++++++|+++++...++.|.+||. ++..... +..+...+.++++
T Consensus 197 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~ 274 (299)
T 2z2n_A 197 WFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIEEYPIQIKSAEPHGICF 274 (299)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEEEEECSSSSCCEEEEEE
T ss_pred EEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceEEEeCCCCCCccceEEe
Confidence 5544 5789999998 5553321 2334567999999999997777767889999998 4543322 3344567999999
Q ss_pred ccCCC
Q 010754 449 SPTGS 453 (502)
Q Consensus 449 sp~g~ 453 (502)
++|.
T Consensus 275 -~~g~ 278 (299)
T 2z2n_A 275 -DGET 278 (299)
T ss_dssp -CSSC
T ss_pred -cCCC
Confidence 8876
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.49 E-value=4.9e-12 Score=133.77 Aligned_cols=197 Identities=7% Similarity=0.032 Sum_probs=138.4
Q ss_pred CCCeEEEEECCCCCEEEEEECCC-----eEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCe----------
Q 010754 274 SKDVTTLDWNGEGTLLATGSYDG-----QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT---------- 338 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~---------- 338 (502)
...+..++|||||++|+.+..++ .|++||+.+............+..++|+|+|+.|+.++.++.
T Consensus 124 ~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 124 TVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred CEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 34588999999999998876543 899999987655433323334678999999999999888766
Q ss_pred ------EEEEEcCCCceE--EEEee--ccCCeEEEEecCCCE-EEEEeC-----CCeEEEEEcCC------Cc-ceEEEe
Q 010754 339 ------AIVWDVKTEEWK--QQFEF--HSGPTLDVDWRNNVS-FATSST-----DNMIYVCKIGE------NR-PIKTFA 395 (502)
Q Consensus 339 ------i~~wd~~~~~~~--~~~~~--~~~~v~~v~~~~~~~-~~~~~~-----d~~i~i~d~~~------~~-~~~~~~ 395 (502)
|++|++.++... ..+.. +...+..+.|++++. ++..+. +..|++||+.+ +. ....+.
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~ 283 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI 283 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee
Confidence 999999887632 22332 344578899988775 444432 57899999986 43 466677
Q ss_pred cCCCcEEEEEEcCCCCEEEEEeCC----CcEEEEECCCCe--eEEEeccCCC--cEEEEEEccCCCCCCCCCccEEEEee
Q 010754 396 GHQGEVNCVKWDPTGSLLASCSDD----VTAKIWNMKQDK--YVHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILARL 467 (502)
Q Consensus 396 ~h~~~i~~l~~sp~g~~las~s~d----g~i~iwd~~~~~--~~~~~~~h~~--~i~~v~~sp~g~~~~~~~~~l~las~ 467 (502)
.+...+.. .|+|+|..|+..+.. +.|.+||+.++. ....+..|.. .+..++|++++. .++.+..
T Consensus 284 ~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-------lv~~~~~ 355 (710)
T 2xdw_A 284 DNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF-------LVLCYLH 355 (710)
T ss_dssp CSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE-------EEEEEEE
T ss_pred CCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE-------EEEEEEE
Confidence 67666655 488999988776653 369999998764 2344444543 688899997665 4455555
Q ss_pred cCceEEEEeee
Q 010754 468 IPYFLYWICSI 478 (502)
Q Consensus 468 ~~~~~iw~~~~ 478 (502)
++..++|.+++
T Consensus 356 ~g~~~l~~~~~ 366 (710)
T 2xdw_A 356 DVKNTLQLHDL 366 (710)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEEEEC
Confidence 67677776553
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.48 E-value=1.3e-12 Score=125.59 Aligned_cols=182 Identities=16% Similarity=0.078 Sum_probs=135.4
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
.+..+++++...+|++|+.++ +++|++.+.............. ........ |+.|+| ++++|+++ .++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~-------~~~~~lp~-V~~l~f--d~~~L~v~-~~~ 106 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTF-------KWEKEIPD-VIFVCF--HGDQVLVS-TRN 106 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCC-------SEEEECTT-EEEEEE--ETTEEEEE-ESS
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccc-------eEEeeCCC-eeEEEE--CCCEEEEE-cCC
Confidence 588999999999999999975 6669976432100000000000 00112345 999999 99999999 789
Q ss_pred eEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEe
Q 010754 297 QARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSS 375 (502)
Q Consensus 297 ~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~ 375 (502)
.|++||+... .......|..++.++.+.+. .+++++.||.|.+||+.++.... +...|.+++|++.+ ++.|.
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG-~~vg~ 179 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ-LAVLL 179 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE-EEEEE
T ss_pred cEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc-eEEEE
Confidence 9999997642 33345567778888887754 38889999999999999887653 44689999999999 78899
Q ss_pred CCCeEEEEEcCCCcc--eEEE------e---cCCCcEEEEEEcCCCCEEEEEe
Q 010754 376 TDNMIYVCKIGENRP--IKTF------A---GHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 376 ~d~~i~i~d~~~~~~--~~~~------~---~h~~~i~~l~~sp~g~~las~s 417 (502)
.||.+++|+...... ..++ . +|...|.+|.|.+++.+|++-+
T Consensus 180 ~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 180 KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEc
Confidence 999999999887765 5556 2 3778899999999999988743
No 198
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.46 E-value=1.2e-10 Score=110.86 Aligned_cols=222 Identities=9% Similarity=0.010 Sum_probs=151.4
Q ss_pred CceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 216 SEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 216 ~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
.-..+.+|+|+ +.++++...++.|..|+..++... . .. ....+.+++|+++|+++++. .
T Consensus 49 ~~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----------~---~~-----~~~~v~~i~~~~dg~l~v~~-~ 108 (326)
T 2ghs_A 49 LLGEGPTFDPASGTAWWFNILERELHELHLASGRKT-----------V---HA-----LPFMGSALAKISDSKQLIAS-D 108 (326)
T ss_dssp SBEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-----------E---EE-----CSSCEEEEEEEETTEEEEEE-T
T ss_pred CCCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-----------E---EE-----CCCcceEEEEeCCCeEEEEE-C
Confidence 34567899997 556677777889999998765321 0 10 12468999999999877754 4
Q ss_pred CCeEEEEECCCceEEEecCc-----cCCeEEEEEecCCCEEEEEec------CCeEEEEEcCCCceEEEEeeccCCeEEE
Q 010754 295 DGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~s~~~------d~~i~~wd~~~~~~~~~~~~~~~~v~~v 363 (502)
..|.+||..+.....+... ...+..++++|+|+++++... .+.|..++ +++... +.........+
T Consensus 109 -~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~~~~~~i 184 (326)
T 2ghs_A 109 -DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADISIPNSI 184 (326)
T ss_dssp -TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEESSEEEE
T ss_pred -CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCCcccCCe
Confidence 4499999865444333221 235789999999987665442 24566666 454433 33333456789
Q ss_pred EecCCCE-E-EEEeCCCeEEEEEcC--CC-cc-----eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 010754 364 DWRNNVS-F-ATSSTDNMIYVCKIG--EN-RP-----IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 364 ~~~~~~~-~-~~~~~d~~i~i~d~~--~~-~~-----~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
+|++++. + ++.+.++.|.+|++. ++ .. +..+......+..++++++|++.++...++.|.+||. +++.+
T Consensus 185 ~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~ 263 (326)
T 2ghs_A 185 CFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHI 263 (326)
T ss_dssp EECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEE
T ss_pred EEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEE
Confidence 9988763 4 444567899999986 55 32 2222233456789999999998888777789999998 67777
Q ss_pred EEeccCCCcEEEEEEc-cCCCCCCCCCccEEEEeecC
Q 010754 434 HDLREHSKEIYTIRWS-PTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~s-p~g~~~~~~~~~l~las~~~ 469 (502)
..+..+...+++++|+ |++. .|++++...
T Consensus 264 ~~i~~~~~~~~~~af~g~d~~-------~L~vt~~~~ 293 (326)
T 2ghs_A 264 ARYEVPGKQTTCPAFIGPDAS-------RLLVTSARE 293 (326)
T ss_dssp EEEECSCSBEEEEEEESTTSC-------EEEEEEBCT
T ss_pred EEEECCCCCcEEEEEecCCCC-------EEEEEecCC
Confidence 7777677779999998 8876 555555544
No 199
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=7.3e-11 Score=109.24 Aligned_cols=210 Identities=14% Similarity=0.106 Sum_probs=153.2
Q ss_pred eEEeccCC-CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 208 VTILEGHT-SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 208 ~~~l~~H~-~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
+-.+..|. ..+.++.++|+|++|+ +.++.|..||. +++.+. .+.. .....+.++.+.++|
T Consensus 28 ~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W-------------~~~~---~~~~~~~~~~~~~dG 88 (276)
T 3no2_A 28 VWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELW-------------NIAA---PAGCEMQTARILPDG 88 (276)
T ss_dssp EEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEE-------------EEEC---CTTCEEEEEEECTTS
T ss_pred EEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEE-------------EEcC---CCCccccccEECCCC
Confidence 33444444 4688999999999888 45778999998 665321 1111 112357889999999
Q ss_pred CEEEEEEC-CCeEEEEECCCceEEEec------CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC
Q 010754 287 TLLATGSY-DGQARIWSTNGDLKCTLS------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 359 (502)
Q Consensus 287 ~~l~s~~~-dg~i~iwd~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~ 359 (502)
+++++.+. ++.|..++.+++.+..+. .+......+.+.++|+++++...++.|..||.. |+.+..+.....
T Consensus 89 ~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~- 166 (276)
T 3no2_A 89 NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGT- 166 (276)
T ss_dssp CEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSC-
T ss_pred CEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCC-
Confidence 99999887 788888898888766554 222345566789999999999999999999987 999988876543
Q ss_pred eEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCC------CcEEEEEEcCCCCEEEEEeCC--------CcEEE
Q 010754 360 TLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ------GEVNCVKWDPTGSLLASCSDD--------VTAKI 424 (502)
Q Consensus 360 v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~------~~i~~l~~sp~g~~las~s~d--------g~i~i 424 (502)
...+...+ +..+++++.+++|..+|..+++.+.++..+. ..+..+...++|+++++.+.. +..++
T Consensus 167 ~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~ 246 (276)
T 3no2_A 167 PFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQL 246 (276)
T ss_dssp CCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSE
T ss_pred ccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceE
Confidence 34455555 4556667777799999999999999987542 237889999999998887421 23456
Q ss_pred EEC-CCCeeEEEecc
Q 010754 425 WNM-KQDKYVHDLRE 438 (502)
Q Consensus 425 wd~-~~~~~~~~~~~ 438 (502)
+.+ .+++.+..+..
T Consensus 247 ~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 247 VEIDSEGKVVWQLND 261 (276)
T ss_dssp EEECTTSBEEEEECC
T ss_pred EEECCCCCEEEEecC
Confidence 666 57777777763
No 200
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.45 E-value=5.2e-10 Score=104.52 Aligned_cols=234 Identities=9% Similarity=-0.025 Sum_probs=162.5
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
....+.++++.++|.++++...++.|.+|+.. ++.. ... . ......+.++++.++|+++++..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~-----------~~~-~----~~~~~~~~~i~~~~~g~l~v~~~ 80 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIK-----------EFE-V----PTPDAKVMCLIVSSLGDIWFTEN 80 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-----------EEE-C----SSTTCCEEEEEECTTSCEEEEET
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceE-----------EEE-C----CCCCCcceeEEECCCCCEEEEec
Confidence 34678899999999988887778999999976 4321 000 0 11235689999999999887777
Q ss_pred CCCeEEEEECCCceEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEE-EeeccCCeEEEEecCCCEE
Q 010754 294 YDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRNNVSF 371 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~-~~~~~~~v~~v~~~~~~~~ 371 (502)
.++.|..||..+..... .......+.++++.++++.+++...++.|..||.. ++.... +......+..+.+.+++.+
T Consensus 81 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 81 GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 68899999988554322 22234678999999999888877778899999987 654432 1223456788888776555
Q ss_pred EEEe-CCCeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEE-eccCCCcEEEEEE
Q 010754 372 ATSS-TDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRW 448 (502)
Q Consensus 372 ~~~~-~d~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~-~~~h~~~i~~v~~ 448 (502)
..+. .++.|..|+. +++.... ...+...+.+++++++|+++++....+.|.+|+. +++.... +..+...+.++++
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred EEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 5444 4788999998 4544321 2234457899999999988887777788999998 5554332 3334566899999
Q ss_pred ccCCCCCCCCCccEEEEee-cCceEEEE
Q 010754 449 SPTGSGTNNPNQQLILARL-IPYFLYWI 475 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~-~~~~~iw~ 475 (502)
+++|. +.+++. .+.+..+.
T Consensus 238 d~~g~--------l~v~~~~~~~i~~~~ 257 (300)
T 2qc5_A 238 GKNSE--------IWFTEWGANQIGRIT 257 (300)
T ss_dssp CSTTC--------EEEEETTTTEEEEEC
T ss_pred CCCCC--------EEEeccCCCeEEEEC
Confidence 99987 344432 35565554
No 201
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.44 E-value=1.2e-10 Score=118.51 Aligned_cols=234 Identities=15% Similarity=0.155 Sum_probs=158.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecC--CCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC----CCCCEE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIA--DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN----GEGTLL 289 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s----~~g~~l 289 (502)
..+..+.|+|||+++++++.|+.|.+||+. +.+.. ..+.. ......++|+ |+|+++
T Consensus 197 ~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v-------------~~i~~-----G~~P~~ia~s~~~~pDGk~l 258 (567)
T 1qks_A 197 YAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTV-------------AEIKI-----GSEARSIETSKMEGWEDKYA 258 (567)
T ss_dssp SCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEE-------------EEEEC-----CSEEEEEEECCSTTCTTTEE
T ss_pred CCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEe-------------EEEec-----CCCCceeEEccccCCCCCEE
Confidence 356789999999999999999999999985 43321 11111 1236789999 699988
Q ss_pred EEEECC-CeEEEEECCC-ceEEEecC----------------------c-------------------------------
Q 010754 290 ATGSYD-GQARIWSTNG-DLKCTLSK----------------------H------------------------------- 314 (502)
Q Consensus 290 ~s~~~d-g~i~iwd~~~-~~~~~~~~----------------------~------------------------------- 314 (502)
+++++. +.|.|+|... +.+..+.. |
T Consensus 259 ~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i 338 (567)
T 1qks_A 259 IAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEI 338 (567)
T ss_dssp EEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEE
T ss_pred EEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeee
Confidence 887754 8999999643 22221110 0
Q ss_pred --cCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEEEee-----ccCCeEEEEecCC-CE-EEEEe-CCCeEEEE
Q 010754 315 --KGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEF-----HSGPTLDVDWRNN-VS-FATSS-TDNMIYVC 383 (502)
Q Consensus 315 --~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~-----~~~~v~~v~~~~~-~~-~~~~~-~d~~i~i~ 383 (502)
......+.|+|++++|++++ .++.|.++|+.+++.+..+.. |.+.-..+ +.++ +. ++++. .++.|.++
T Consensus 339 ~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvi 417 (567)
T 1qks_A 339 SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALI 417 (567)
T ss_dssp ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEE
T ss_pred eccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEe
Confidence 01123567999999887765 578999999999988777654 22112222 3554 44 44443 46899999
Q ss_pred EcCC-------CcceEEEecCCCcEEEEEEcCCCCEEEEEeC-------CCcEEEEECCCC-----e-eEEEec------
Q 010754 384 KIGE-------NRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-------DVTAKIWNMKQD-----K-YVHDLR------ 437 (502)
Q Consensus 384 d~~~-------~~~~~~~~~h~~~i~~l~~sp~g~~las~s~-------dg~i~iwd~~~~-----~-~~~~~~------ 437 (502)
|..+ .+.++++......-..|..+|++++|..... .++|.|+|+.+. . .+..+.
T Consensus 418 d~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~ 497 (567)
T 1qks_A 418 GTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAG 497 (567)
T ss_dssp ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHT
T ss_pred cCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccc
Confidence 9987 5677888765444455789999999988763 358999999876 2 112332
Q ss_pred --cCCCcEEEEEEccCCCCCCCCCccEEEEee-----cCceEEEE
Q 010754 438 --EHSKEIYTIRWSPTGSGTNNPNQQLILARL-----IPYFLYWI 475 (502)
Q Consensus 438 --~h~~~i~~v~~sp~g~~~~~~~~~l~las~-----~~~~~iw~ 475 (502)
.....+..+.|+|+|. .+.++.. ++.+.+++
T Consensus 498 ~~~~~~~~~~~~~~~~G~-------~~~~s~~~~~~~~~~i~v~D 535 (567)
T 1qks_A 498 ITEGQPRVVQGEFNKDGT-------EVWFSVWNGKDQESALVVVD 535 (567)
T ss_dssp CCSSCCEEEEEEECTTSS-------EEEEEEECCTTSCCEEEEEE
T ss_pred cCCCCcceEeeeECCCCC-------EEEEEeecCCCCCCcEEEEE
Confidence 1245689999999998 6666543 46666654
No 202
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.43 E-value=1e-10 Score=119.10 Aligned_cols=224 Identities=9% Similarity=-0.018 Sum_probs=155.4
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEEC-
Q 010754 225 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST- 303 (502)
Q Consensus 225 p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~- 303 (502)
|.+.++++...+++|.++|..+++.+. .+.. ...+..+.|+|||+++++++.++.|.+||+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~-------------~i~~-----g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKT-------------VLDT-----GYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEE-------------EEEC-----SSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEE-------------EEeC-----CCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 344567777889999999998876422 1111 234678999999999999999999999998
Q ss_pred --CCceEEEecCccCCeEEEEEe----cCCCEEEEEec-CCeEEEEEcCCCceEEEEeecc----------C-CeEEEEe
Q 010754 304 --NGDLKCTLSKHKGPIFSLKWN----KKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHS----------G-PTLDVDW 365 (502)
Q Consensus 304 --~~~~~~~~~~~~~~v~~l~~~----~~~~~l~s~~~-d~~i~~wd~~~~~~~~~~~~~~----------~-~v~~v~~ 365 (502)
....+..+.... ....++|+ |+|+++++++. +++|.++|..+.+.+..+.... . .+..+..
T Consensus 227 ~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 227 MKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp SSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred CCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 345555554433 35789999 69998887665 5899999999999888776321 1 4566666
Q ss_pred cCC-CE-EEEEeCCCeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEecc--
Q 010754 366 RNN-VS-FATSSTDNMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLRE-- 438 (502)
Q Consensus 366 ~~~-~~-~~~~~~d~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~~~~~~~~-- 438 (502)
+++ .. ++.....|.|.++|......+ ..+. .......+.|+|+|++|++++ .++.|.++|+.+++.+..+..
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg 384 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGG 384 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSS
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccC
Confidence 554 33 445566799999998765432 2232 344577899999999987665 578999999999998876653
Q ss_pred ---CCCcEEEEEEccCCCCCCCCCccEEEEe--ecCceEEEEe
Q 010754 439 ---HSKEIYTIRWSPTGSGTNNPNQQLILAR--LIPYFLYWIC 476 (502)
Q Consensus 439 ---h~~~i~~v~~sp~g~~~~~~~~~l~las--~~~~~~iw~~ 476 (502)
|.+.-.. -++|++. .+++.+ .++.+.++..
T Consensus 385 ~~Phpg~g~~-~~~p~~g-------~v~~t~~~g~~~Vsvid~ 419 (567)
T 1qks_A 385 QTPHPGRGAN-FVHPTFG-------PVWATSHMGDDSVALIGT 419 (567)
T ss_dssp SSBCCTTCEE-EEETTTE-------EEEEEEBSSSSEEEEEEC
T ss_pred cCCCCcccee-eECCCCC-------cEEEeCCCCCCeEEEecC
Confidence 3221112 2578754 333333 3466777753
No 203
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.43 E-value=4e-11 Score=112.96 Aligned_cols=233 Identities=12% Similarity=0.065 Sum_probs=157.1
Q ss_pred CCceEEeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC
Q 010754 205 NSDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 283 (502)
Q Consensus 205 ~~~~~~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s 283 (502)
...+..+..+.......+|+|+++ +++++..++.|..|+. ++.. ..+. .....+..++++
T Consensus 34 ~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~-~g~~-----------~~~~-------~~~~~~~gl~~d 94 (305)
T 3dr2_A 34 DARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRE-DGTV-----------DVLL-------DATAFTNGNAVD 94 (305)
T ss_dssp TCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEET-TSCE-----------EEEE-------ESCSCEEEEEEC
T ss_pred CCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeC-CCCE-----------EEEe-------CCCCccceeeEC
Confidence 345566666667788999999988 6777778899999986 3321 0111 123468999999
Q ss_pred CCCCEEEEEECCCeEEEEECCCceEEEecCc----cCCeEEEEEecCCCEEEE----Eec-------------CCeEEEE
Q 010754 284 GEGTLLATGSYDGQARIWSTNGDLKCTLSKH----KGPIFSLKWNKKGDYLLT----GSC-------------DKTAIVW 342 (502)
Q Consensus 284 ~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~v~~l~~~~~~~~l~s----~~~-------------d~~i~~w 342 (502)
++|+++++...++.|.+|+.++......... ...+..++++++|+.+++ |.. .+.|..|
T Consensus 95 ~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 95 AQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp TTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 9999776655668899999875533222111 134678999999998876 332 2568888
Q ss_pred EcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCC------CeEEEEEcCCCcc--eEEE-ecCCCcEEEEEEcCCCCE
Q 010754 343 DVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTD------NMIYVCKIGENRP--IKTF-AGHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 343 d~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d------~~i~i~d~~~~~~--~~~~-~~h~~~i~~l~~sp~g~~ 412 (502)
|..+++..... .......++|++++. ++++... +.|++|++..+.. ...+ ....+....++++++|++
T Consensus 175 d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~l 252 (305)
T 3dr2_A 175 PPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWL 252 (305)
T ss_dssp CSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCE
T ss_pred cCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCE
Confidence 87777655433 344567899988764 6565554 7899999876541 1112 112344567899999995
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecC
Q 010754 413 LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIP 469 (502)
Q Consensus 413 las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~ 469 (502)
.++. .+| |.+|+. .++.+..+..+. .+.+++|+|++. .|++++.++
T Consensus 253 wv~~-~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~-------~L~it~~~~ 298 (305)
T 3dr2_A 253 WSSS-GTG-VCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQ-------RLFITGGPC 298 (305)
T ss_dssp EECC-SSE-EEEECT-TSCEEEEEECSS-CCCEEEECTTSC-------EEEEEETTE
T ss_pred EEec-CCc-EEEECC-CCCEEEEEECCC-ceeEEEEeCCCC-------EEEEEcCCe
Confidence 5544 454 999997 577777776554 588999998886 566665543
No 204
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.42 E-value=1.6e-11 Score=113.29 Aligned_cols=200 Identities=6% Similarity=-0.026 Sum_probs=142.4
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
+...+.+++++++|+++++.. ++.|.+|+........ .. ......+.+++++++|+++++..
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~--------------~~---~~~~~~p~~i~~~~~g~l~v~~~ 126 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV--------------LP---FDGLNYPEGLAVDTQGAVYVADR 126 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE--------------CC---CCSCSSEEEEEECTTCCEEEEEG
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee--------------ee---cCCcCCCcceEECCCCCEEEEEC
Confidence 345678999999999766665 8899999976543210 00 01124589999999999887777
Q ss_pred CCCeEEEEECCCceEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEE-
Q 010754 294 YDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF- 371 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~- 371 (502)
.++.|.+|+........ .......+.+++++++|+.+++...++.|.+||................+..+++.+++.+
T Consensus 127 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~ 206 (270)
T 1rwi_B 127 GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVY 206 (270)
T ss_dssp GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEE
T ss_pred CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEE
Confidence 78999999865433222 2223346788999999997777777889999998776544332223356788999876554
Q ss_pred EEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCe
Q 010754 372 ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~ 431 (502)
++...++.|.+|+............+...+.+++++++|+++++...++.|++++....+
T Consensus 207 v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 207 VTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred EEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 444567899999987654433222334578999999999999999999999999987544
No 205
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.41 E-value=1.3e-11 Score=130.16 Aligned_cols=195 Identities=9% Similarity=-0.028 Sum_probs=131.2
Q ss_pred CCCCeEEEEECCCCCEEEEE-----ECCCeEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEecCCe-------
Q 010754 273 KSKDVTTLDWNGEGTLLATG-----SYDGQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCDKT------- 338 (502)
Q Consensus 273 ~~~~v~~l~~s~~g~~l~s~-----~~dg~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~d~~------- 338 (502)
|...+..++|||||++||.+ +.+..|++||+.+..... ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 119 ~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 119 GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGG
T ss_pred CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCcccc
Confidence 44568999999999999843 344689999998654430 1122222 68999999999999988776
Q ss_pred ------EEEEEcCCCce--EEEEe--eccCCeEEEEecCCCE-EEEEeCCC----eEEEEEcCCCcceEEEecCCCcEEE
Q 010754 339 ------AIVWDVKTEEW--KQQFE--FHSGPTLDVDWRNNVS-FATSSTDN----MIYVCKIGENRPIKTFAGHQGEVNC 403 (502)
Q Consensus 339 ------i~~wd~~~~~~--~~~~~--~~~~~v~~v~~~~~~~-~~~~~~d~----~i~i~d~~~~~~~~~~~~h~~~i~~ 403 (502)
|++|++.++.. ...+. .+...+..+.|++++. ++.++.++ .|++++..++. ...+..+...+..
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~ 276 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYE 276 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEE
Confidence 99999988762 22233 2445788999988765 55555444 67777665554 4455556666666
Q ss_pred EEEcCCCCEEEEEe---CCCcEEEEECCCCee---EEEeccC-CCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 404 VKWDPTGSLLASCS---DDVTAKIWNMKQDKY---VHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 404 l~~sp~g~~las~s---~dg~i~iwd~~~~~~---~~~~~~h-~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..+ ++|.+++++. .++.|.+||+.++.. ...+..+ ...+..++|+ ++. .++.+..++..++|..
T Consensus 277 ~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~-------lv~~~~~dg~~~l~~~ 347 (695)
T 2bkl_A 277 VHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGH-------LSLEYLKDATSEVRVA 347 (695)
T ss_dssp EEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTE-------EEEEEEETTEEEEEEE
T ss_pred EEe-cCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCE-------EEEEEEECCEEEEEEE
Confidence 667 5666544444 257899999987653 3333333 4568889998 443 4556666788899976
Q ss_pred ee
Q 010754 477 SI 478 (502)
Q Consensus 477 ~~ 478 (502)
++
T Consensus 348 ~~ 349 (695)
T 2bkl_A 348 TL 349 (695)
T ss_dssp ET
T ss_pred eC
Confidence 53
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.40 E-value=5.1e-11 Score=125.45 Aligned_cols=220 Identities=10% Similarity=0.095 Sum_probs=147.1
Q ss_pred ccCCCceEEEEEcCCCCeEEEE-----eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCC
Q 010754 212 EGHTSEVCACAWSPAGSLLASG-----SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 286 (502)
Q Consensus 212 ~~H~~~V~~~~~~p~~~~l~sg-----s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g 286 (502)
.+|...+..++|||||++||.+ +.+.+|++||+.+++... ..+.. .....++|+ ||
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~---------~~~~~---------~k~~~~~Ws-Dg 185 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLE---------TPLKD---------VKFSGISWL-GN 185 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEE---------EEEEE---------EESCCCEEE-TT
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCc---------cccCC---------ceeccEEEe-CC
Confidence 3566788999999999988843 333579999999876321 00000 012467899 99
Q ss_pred CEEEEEECCC-------------eEEEEECCCce---EEEe--cC-ccCCeEEEEEecCCCEEEEEec----CCeEEEEE
Q 010754 287 TLLATGSYDG-------------QARIWSTNGDL---KCTL--SK-HKGPIFSLKWNKKGDYLLTGSC----DKTAIVWD 343 (502)
Q Consensus 287 ~~l~s~~~dg-------------~i~iwd~~~~~---~~~~--~~-~~~~v~~l~~~~~~~~l~s~~~----d~~i~~wd 343 (502)
+.|+.++.+. .|++|++.+.. ...+ .. |...+.++.|+|+|++|+.... ++.|+++|
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 9999998774 39999976432 2233 23 4455788999999998865433 35899999
Q ss_pred cCCCc-eEEEEeeccCCeEEEEecCCCEEEEEe-C---CCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEE
Q 010754 344 VKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSS-T---DNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 344 ~~~~~-~~~~~~~~~~~v~~v~~~~~~~~~~~~-~---d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~ 416 (502)
+.++. ....+..+..........+++.|+..+ . .+.|..+++.++.. ...+..|...+. .|++++++|+..
T Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 266 LSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp TTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 97763 344555555555554334455544443 3 36799999988754 456666766665 899999988776
Q ss_pred eC-CC--cEEEEECCCCeeEEEec-cCCCcEEEEEEccCCC
Q 010754 417 SD-DV--TAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 417 s~-dg--~i~iwd~~~~~~~~~~~-~h~~~i~~v~~sp~g~ 453 (502)
.. ++ .|++|++..+. ...+. ...+.+..+.++|++.
T Consensus 344 ~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCS
T ss_pred EEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCC
Confidence 65 43 68999987544 44444 3445677888888876
No 207
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.39 E-value=1.1e-10 Score=111.13 Aligned_cols=203 Identities=8% Similarity=-0.028 Sum_probs=142.3
Q ss_pred CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecC
Q 010754 235 GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSK 313 (502)
Q Consensus 235 ~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~ 313 (502)
.+++|.+||..+++....+.. .... .........+.+. +++++++...++.|.+||... +.+..+.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~---------~~n~--~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~- 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFY---------RANG--FKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT- 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHH---------HHHS--SCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-
T ss_pred CCceEEEEECCCCEEhhhhHh---------hhcC--cccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-
Confidence 378999999988764321100 0000 0111335677774 345555566679999999874 4445553
Q ss_pred ccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEEEeecc-----CCeEEEEecCCCEEEEEe--CCCeEEEEEc
Q 010754 314 HKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHS-----GPTLDVDWRNNVSFATSS--TDNMIYVCKI 385 (502)
Q Consensus 314 ~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~~-----~~v~~v~~~~~~~~~~~~--~d~~i~i~d~ 385 (502)
.......+++++++. ++++. .++.|.+||..+++....+.... .....+.+ .++.++++. .++.|.++|.
T Consensus 82 ~~~~p~~i~~~~~g~-lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEK-AYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CCSSEEEEEEEETTE-EEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCCcEEEEeCCCe-EEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 346678999999884 55544 89999999999998887776543 03345666 445554444 4899999999
Q ss_pred CCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC----------CcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCC
Q 010754 386 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----------VTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGS 453 (502)
Q Consensus 386 ~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d----------g~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~ 453 (502)
.+++.+.++... .....++++|+|++++++..+ +.|.+||..+++....+... ......++|+|++.
T Consensus 160 ~t~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 160 ETDKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp TTTEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC
T ss_pred CCCeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC
Confidence 999888877643 346789999999988877665 78999999999988776532 33689999999987
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.37 E-value=1.8e-09 Score=100.85 Aligned_cols=219 Identities=9% Similarity=0.019 Sum_probs=153.9
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
+...+.++++.+++.++++...++.|..||.. ++.. . ... ......+.++++.++|+++++..
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-----------~---~~~--~~~~~~~~~i~~~~~g~l~v~~~ 122 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-----------E---YPL--PQPDSGPYGITEGLNGDIWFTQL 122 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-----------E---EEC--SSTTCCEEEEEECSTTCEEEEET
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-----------E---ecC--CCCCCCCccceECCCCCEEEEcc
Confidence 44678999999999988877777889999876 4311 0 100 11124689999999999888777
Q ss_pred CCCeEEEEECCCceEEE-ecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe--eccCCeEEEEecCCCE
Q 010754 294 YDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNNVS 370 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~v~~v~~~~~~~ 370 (502)
.++.|..|+..+..... +......+.++++.++++..++...++.|..||. +++... +. .....+..+.+.+++.
T Consensus 123 ~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~ 200 (300)
T 2qc5_A 123 NGDRIGKLTADGTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGA 200 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSS
T ss_pred CCCeEEEECCCCCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCC
Confidence 78899999988554422 2334567899999999996666666789999998 565543 32 2334578888877666
Q ss_pred EEEEe-CCCeEEEEEcCCCcceEE-EecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE-EeccCCCcEEEEE
Q 010754 371 FATSS-TDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIR 447 (502)
Q Consensus 371 ~~~~~-~d~~i~i~d~~~~~~~~~-~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~-~~~~h~~~i~~v~ 447 (502)
+..+. ..+.|.+|+. ++..... +..+...+.+++++++|+++++...++.|..||. +++... .+......+.+++
T Consensus 201 l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~ 278 (300)
T 2qc5_A 201 LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQIGRITN-DNTIQEYQLQTENAEPHGIT 278 (300)
T ss_dssp EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEE
T ss_pred EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCeEEEECC-CCcEEEEECCccCCccceeE
Confidence 55554 5678999998 4443322 2334567899999999998777777889999998 454332 2333345688899
Q ss_pred EccCCC
Q 010754 448 WSPTGS 453 (502)
Q Consensus 448 ~sp~g~ 453 (502)
+.++|.
T Consensus 279 ~~~~g~ 284 (300)
T 2qc5_A 279 FGKDGS 284 (300)
T ss_dssp ECTTSC
T ss_pred eCCCCC
Confidence 999886
No 209
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=3.1e-10 Score=107.03 Aligned_cols=201 Identities=11% Similarity=0.124 Sum_probs=136.9
Q ss_pred CCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 214 HTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 214 H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
+...+.+++++++ ++++++.. ...|.+|+.. ++..... ...........+.+++++++|+++++.
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~------------~~~~~~~~~~~~~~i~~d~~g~l~v~~ 134 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIA------------KKDSEGRRMQGCNDCAFDYEGNLWITA 134 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECC------------SBCTTSCBCBCCCEEEECTTSCEEEEE
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEE------------eccCCCccccCCcCEEECCCCCEEEEe
Confidence 5577999999999 76565554 4478889987 5421100 000001112458899999999988777
Q ss_pred ECC---------------CeEEEEECCCceEEEecCccCCeEEEEEe----cCCCEEEEE-ecCCeEEEEEcC-CCceE-
Q 010754 293 SYD---------------GQARIWSTNGDLKCTLSKHKGPIFSLKWN----KKGDYLLTG-SCDKTAIVWDVK-TEEWK- 350 (502)
Q Consensus 293 ~~d---------------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~----~~~~~l~s~-~~d~~i~~wd~~-~~~~~- 350 (502)
..+ +.|..|+..+... .+..+......++|+ |+++.|+.+ ..++.|.+||.. ++...
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~l~~~~~~g~~~-~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~ 213 (314)
T 1pjx_A 135 PAGEVAPADYTRSMQEKFGSIYCFTTDGQMI-QVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN 213 (314)
T ss_dssp CBCBCTTSCCCBTTSSSCEEEEEECTTSCEE-EEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE
T ss_pred cCcccccccccccccCCCCeEEEECCCCCEE-EeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc
Confidence 654 5677777664433 333344567889999 999766555 467899999986 44421
Q ss_pred ----EEEeecc-CCeEEEEecCCCEEE-EEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEE-EEEeCCCcEE
Q 010754 351 ----QQFEFHS-GPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAK 423 (502)
Q Consensus 351 ----~~~~~~~-~~v~~v~~~~~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~l-as~s~dg~i~ 423 (502)
..+..+. ..+..+++.+++.+. +...++.|.+||..+++.+..+..+...+.+++|+|+|+.| ++...++.|.
T Consensus 214 ~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~ 293 (314)
T 1pjx_A 214 KKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVW 293 (314)
T ss_dssp EEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred ceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEE
Confidence 1122222 456788887766554 44578899999998788777787777889999999999955 4555678899
Q ss_pred EEECCC
Q 010754 424 IWNMKQ 429 (502)
Q Consensus 424 iwd~~~ 429 (502)
.|++..
T Consensus 294 ~~~~~~ 299 (314)
T 1pjx_A 294 KFEWQR 299 (314)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 999764
No 210
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.33 E-value=1.8e-10 Score=122.33 Aligned_cols=193 Identities=11% Similarity=0.056 Sum_probs=131.9
Q ss_pred CCeEEEEECCCCCEEEEEECC-----CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCe-----------
Q 010754 275 KDVTTLDWNGEGTLLATGSYD-----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT----------- 338 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~----------- 338 (502)
..+..++|||||++|+.++.+ ..|++||+.+........+...+..++|+|+ +.|+.++.++.
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 358899999999999887654 3699999987655443223333467899999 99988877654
Q ss_pred ---EEEEEcCCCce--EEEEeecc--CCeEEEEecCCCE-EEEEeC-----CCeEEEEEcCCC--cceEEEecCCCcEEE
Q 010754 339 ---AIVWDVKTEEW--KQQFEFHS--GPTLDVDWRNNVS-FATSST-----DNMIYVCKIGEN--RPIKTFAGHQGEVNC 403 (502)
Q Consensus 339 ---i~~wd~~~~~~--~~~~~~~~--~~v~~v~~~~~~~-~~~~~~-----d~~i~i~d~~~~--~~~~~~~~h~~~i~~ 403 (502)
|++|++.++.. ...+.... ..+..+.|++++. ++..+. ...|++||+.++ .+...+..+...+..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEE
Confidence 89999977752 22333322 3578999998874 444443 348999999877 424566656555555
Q ss_pred EEEcCCCCEEEEEeCC----CcEEEEECCCC--eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 404 VKWDPTGSLLASCSDD----VTAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 404 l~~sp~g~~las~s~d----g~i~iwd~~~~--~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
.. +|+|+.|+..+.+ +.|.+||+.++ .....+..+...+.+++|+ ++. .++.+..++..++|..+
T Consensus 322 ~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~-------lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 322 FV-DGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNR-------LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp EE-EEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTE-------EEEEEEETTEEEEEEEE
T ss_pred EE-eccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCE-------EEEEEEECCEEEEEEEe
Confidence 53 4899988887764 45999999874 3444444555567778887 333 45556667888888765
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.30 E-value=4e-09 Score=101.95 Aligned_cols=221 Identities=9% Similarity=-0.039 Sum_probs=134.7
Q ss_pred CCCCeEEEEeC--CC---cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE------
Q 010754 225 PAGSLLASGSG--DS---TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------ 293 (502)
Q Consensus 225 p~~~~l~sgs~--dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~------ 293 (502)
|+++++++... .. +|.+||..+++.+. .+.. ... - .++++|||++++++.
T Consensus 30 ~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~-------------~i~~----g~~-p-~i~~spDg~~lyv~n~~~~~~ 90 (373)
T 2mad_H 30 ADGRRSYINLPAHHSAIIQQWVLDAGSGSILG-------------HVNG----GFL-P-NPVAAHSGSEFALASTSFSRI 90 (373)
T ss_pred CCCCEEEEeCCcccCCccEEEEEECCCCeEEE-------------EecC----CCC-C-CeEECCCCCEEEEEecccccc
Confidence 56665555542 22 78999988765321 1111 112 2 899999999999886
Q ss_pred ----CCCeEEEEECCC-ceEEEecCc-------cCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEE-EeeccC
Q 010754 294 ----YDGQARIWSTNG-DLKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFHSG 358 (502)
Q Consensus 294 ----~dg~i~iwd~~~-~~~~~~~~~-------~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~-~~~~~~ 358 (502)
.++.|.+||... .....+... ......+.|+|+|++|++++. ++.|.++| .+++.+.. +....
T Consensus 91 ~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~- 168 (373)
T 2mad_H 91 AKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT- 168 (373)
T ss_pred ccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc-
Confidence 367899999864 333333211 123458999999999998874 57899999 99988777 53211
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCCCcce-----------------------------------------------
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI----------------------------------------------- 391 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~----------------------------------------------- 391 (502)
.+ .+.......+++.+.||.+.+++. +++.+
T Consensus 169 ~~-~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~ 246 (373)
T 2mad_H 169 CY-HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA 246 (373)
T ss_pred eE-EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc
Confidence 11 111111223334444444444444 22221
Q ss_pred ---EEEecC----------CCcEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 392 ---KTFAGH----------QGEVNCVKWDPTGSLLASCSD----------DVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 392 ---~~~~~h----------~~~i~~l~~sp~g~~las~s~----------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
..+.-. ......+.++|+++.|..+.. .+.|.++|..+++.+..+. ......+++|
T Consensus 247 ~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~-~g~~p~~i~~ 325 (373)
T 2mad_H 247 TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS-LGHDVDAISV 325 (373)
T ss_pred eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE-CCCCcCeEEE
Confidence 111100 011223678888887776543 3579999999999999886 3345899999
Q ss_pred ccCCCCCCCCCccEEEEee--cCceEEEEe
Q 010754 449 SPTGSGTNNPNQQLILARL--IPYFLYWIC 476 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~--~~~~~iw~~ 476 (502)
+|||. .++..+. ++.+.+++.
T Consensus 326 s~Dg~-------~~l~v~~~~~~~V~ViD~ 348 (373)
T 2mad_H 326 AQDGG-------PDLYALSAGTEVLHIYDA 348 (373)
T ss_pred CCCCC-------eEEEEEcCCCCeEEEEEC
Confidence 99986 3344433 567777664
No 212
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.23 E-value=3.7e-09 Score=101.23 Aligned_cols=227 Identities=9% Similarity=0.026 Sum_probs=145.8
Q ss_pred CceEEEEEcCCCCeEEEEe--CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 216 SEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
..+..++++|+|+++++.. .++.++||.+.+++.. .+.........+...+..++++++|+++++-.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-----------~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-----------PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-----------ESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-----------cCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 6789999999999988864 2343667766533211 00000011123456799999999988666554
Q ss_pred C-----CCeEEEEECCC-ceEEEecC------ccCCeEEEEEecCCCEE-EEEe---cCCeEEEEEcCCCceEEEEeecc
Q 010754 294 Y-----DGQARIWSTNG-DLKCTLSK------HKGPIFSLKWNKKGDYL-LTGS---CDKTAIVWDVKTEEWKQQFEFHS 357 (502)
Q Consensus 294 ~-----dg~i~iwd~~~-~~~~~~~~------~~~~v~~l~~~~~~~~l-~s~~---~d~~i~~wd~~~~~~~~~~~~~~ 357 (502)
. ++.|.+||+.+ .....+.. +...+..+++++++..+ ++-. .++.|.+||+.+++..+.+..|.
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 3 57899999874 44444432 22356899999865555 4444 57899999998887665443210
Q ss_pred -----------------------------CCeEEEEecCCC-EEEEEeCCC-eEEEEEcC---CCc-----ce--EEEec
Q 010754 358 -----------------------------GPTLDVDWRNNV-SFATSSTDN-MIYVCKIG---ENR-----PI--KTFAG 396 (502)
Q Consensus 358 -----------------------------~~v~~v~~~~~~-~~~~~~~d~-~i~i~d~~---~~~-----~~--~~~~~ 396 (502)
..+..|+|++++ .++++...+ .++.++.. .+. .. ....+
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g 245 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYS 245 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEE
T ss_pred cccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecc
Confidence 135778888876 455555444 56555532 110 00 01223
Q ss_pred CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc-CCCcEEEEEEccCCC
Q 010754 397 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGS 453 (502)
Q Consensus 397 h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~-h~~~i~~v~~sp~g~ 453 (502)
+.+....++++++|+++++...++.|.+||..+++....... +.....+++|.++|.
T Consensus 246 ~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 246 EKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp ECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSC
T ss_pred cCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCc
Confidence 444567899999999999999999999999856764333322 245689999999886
No 213
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.19 E-value=2.8e-09 Score=104.47 Aligned_cols=176 Identities=11% Similarity=-0.003 Sum_probs=124.7
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC--eEEEEEcCCCceEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQ 352 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~--~i~~wd~~~~~~~~~ 352 (502)
.....|+|+++|+++++...++.|++||..+..+..+........ ++|+++++.|++++.++ .|.+|+...+.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 468899999999977777778999999998655554433333334 99999999999888866 899999876655444
Q ss_pred E----eeccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEE----EecCCCcE--EEEEEcCC-CCEEEEEeCCC
Q 010754 353 F----EFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKT----FAGHQGEV--NCVKWDPT-GSLLASCSDDV 420 (502)
Q Consensus 353 ~----~~~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~----~~~h~~~i--~~l~~sp~-g~~las~s~dg 420 (502)
+ ......+.++++.+ ++.++++..++.|+.||..++..... ..++...- +.++|+|+ +.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 4 11344567888888 67777777888999999987653222 12222222 38999995 66666667788
Q ss_pred cEEEEECCCCeeEEEeccCC---------------CcEEEEEEccCCC
Q 010754 421 TAKIWNMKQDKYVHDLREHS---------------KEIYTIRWSPTGS 453 (502)
Q Consensus 421 ~i~iwd~~~~~~~~~~~~h~---------------~~i~~v~~sp~g~ 453 (502)
.|+.|+.... +..+.++. .....++|+|+|.
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 9999997643 23333322 3478999999987
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.19 E-value=4.8e-09 Score=100.38 Aligned_cols=237 Identities=9% Similarity=-0.007 Sum_probs=150.6
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 220 ACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.++++|||++|+.++ .++.|.+||..+.+....+ ....+...........++|+|||+++
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I----------~v~~g~r~~~g~~P~~~a~spDGk~l 151 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADI----------ELPDAPRFLVGTYPWMTSLTPDGKTL 151 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE----------EETTCCCCCBSCCGGGEEECTTSSEE
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEE----------ECCCccccccCCCCceEEEcCCCCEE
Confidence 399999999887765 3678999999887643211 00000000011245678999999999
Q ss_pred EEEEC--CCeEEEEECCCceE-EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-CceEEEEeec----cCCeE
Q 010754 290 ATGSY--DGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFH----SGPTL 361 (502)
Q Consensus 290 ~s~~~--dg~i~iwd~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~----~~~v~ 361 (502)
+++.. ++.|.++|+....+ ..+.. .+ . ...+....+.+++.+.||.+.+.++.+ ++........ ..++.
T Consensus 152 yVan~~~~~~VsVID~~t~~vv~tI~v-~g-~-~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 152 LFYQFSPAPAVGVVDLEGKAFKRMLDV-PD-C-YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 228 (386)
T ss_dssp EEEECSSSCEEEEEETTTTEEEEEEEC-CS-E-EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred EEEEcCCCCeEEEEECCCCcEEEEEEC-CC-c-ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence 98875 68999999876543 34422 11 1 223333446777888999999999876 5543322111 11221
Q ss_pred -EEEe-cCCCEEEEEeCCCeEEEEEcCCCc--ceEEEe---------c-CCCcEEEEEEcCCCCEEEEEeC---------
Q 010754 362 -DVDW-RNNVSFATSSTDNMIYVCKIGENR--PIKTFA---------G-HQGEVNCVKWDPTGSLLASCSD--------- 418 (502)
Q Consensus 362 -~v~~-~~~~~~~~~~~d~~i~i~d~~~~~--~~~~~~---------~-h~~~i~~l~~sp~g~~las~s~--------- 418 (502)
...| .+++.++..+.+|.|++.|+.+.. .+..+. + ..+....++++|+++.++....
T Consensus 229 ~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 229 NHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp SCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred ccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 2344 356666667778999999997664 233232 0 0122334777999988777643
Q ss_pred -CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee-cCceEEEEe
Q 010754 419 -DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL-IPYFLYWIC 476 (502)
Q Consensus 419 -dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-~~~~~iw~~ 476 (502)
.+.|.+.|+.+++.+..+.. ..++++|+++|||. ..|+++.. ++++.+++.
T Consensus 309 ~~~~V~viD~~t~kv~~~i~v-g~~~~~lavs~D~~------~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEM-GHEIDSINVSQDEK------PLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEE-EEEECEEEECSSSS------CEEEEEETTTTEEEEEET
T ss_pred CCCEEEEEECCCCeEEEEEEC-CCCcceEEECCCCC------eEEEEEcCCCCeEEEEEC
Confidence 24699999999999998873 23688999999985 13344333 677777764
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.17 E-value=3.9e-09 Score=99.24 Aligned_cols=196 Identities=11% Similarity=0.074 Sum_probs=130.5
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
+..+..+...+..++++++|+++++...++.|.+|+.. ++.. .. ..... ......+..++++++|+
T Consensus 78 ~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~---------~~-~~~~~---~~~~~~~~~i~~d~dG~ 143 (305)
T 3dr2_A 78 VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAH---------LL-VGRYA---GKRLNSPNDLIVARDGA 143 (305)
T ss_dssp EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE---------EE-ECEET---TEECSCCCCEEECTTSC
T ss_pred EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEE---------EE-EeccC---CCccCCCCCEEECCCCC
Confidence 45555667789999999999977776666889999875 3311 00 00010 11123477899999999
Q ss_pred EEEE----EEC-------------CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC------CeEEEEEc
Q 010754 288 LLAT----GSY-------------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD------KTAIVWDV 344 (502)
Q Consensus 288 ~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d------~~i~~wd~ 344 (502)
++++ |.. .+.|..|+..+.....+. .......++|+|+++.|+.+... +.|.+||+
T Consensus 144 l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~ 222 (305)
T 3dr2_A 144 IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAW 222 (305)
T ss_dssp EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEE
T ss_pred EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEe
Confidence 8886 332 256777777433333333 44567889999999988877665 78999998
Q ss_pred CCCceE--EEE-eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCc
Q 010754 345 KTEEWK--QQF-EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 421 (502)
Q Consensus 345 ~~~~~~--~~~-~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~ 421 (502)
..+... ..+ .........+.+.+++.+.++..+ .|.+|+. .++.+..+..+. .+.+++|+|+++.|..++.++.
T Consensus 223 ~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~~-gv~~~~~-~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l 299 (305)
T 3dr2_A 223 RDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSGT-GVCVFDS-DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCL 299 (305)
T ss_dssp ETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCSS-EEEEECT-TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEE
T ss_pred cCCCccCCeEEEECCCCCCCeEEECCCCCEEEecCC-cEEEECC-CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeE
Confidence 765421 111 111233445777777777666644 5999998 566777776555 5889999999998888887653
No 216
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.16 E-value=9.1e-12 Score=120.63 Aligned_cols=200 Identities=12% Similarity=0.002 Sum_probs=114.2
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN- 304 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~- 304 (502)
++..+++++.|+.|+.||..+++.... ... ..+.+..+..++..+++++.||.|+.||..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~-------------~~~------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~t 68 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWT-------------LKE------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKN 68 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEE-------------EEC------CCSCCCC-----CCEEECTTTCCEEEC----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEE-------------ecC------CCceecceEcCCCEEEEeCCCCEEEEEECCC
Confidence 577899999999999999998874321 111 123333344677788888899999999984
Q ss_pred CceEEEecCccC-CeE-EEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEec-CCCEEEEEeCCCeEE
Q 010754 305 GDLKCTLSKHKG-PIF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIY 381 (502)
Q Consensus 305 ~~~~~~~~~~~~-~v~-~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~-~~~~~~~~~~d~~i~ 381 (502)
++.+..+..+.. .+. +..+. .+..+++++.|+.|+.||..+|+.+..+..+.. ..+. .++.+++++.++.|+
T Consensus 69 G~~~w~~~~~~~~~~~~sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~~----~~~~p~~~~v~~~~~dg~v~ 143 (369)
T 2hz6_A 69 NEGLTKLPFTIPELVQASPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAFA----DSLSPSTSLLYLGRTEYTIT 143 (369)
T ss_dssp -CCSEECSCCHHHHHTTCSCC------CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEE
T ss_pred CceeeeeeccCccccccCceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCCc----ccccccCCEEEEEecCCEEE
Confidence 554444433211 110 00111 345788888999999999999998877765432 1122 456688888999999
Q ss_pred EEEcCCCcceEEEecCCCcEEEEEEcCCC---CEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE-EEEccCC
Q 010754 382 VCKIGENRPIKTFAGHQGEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT-IRWSPTG 452 (502)
Q Consensus 382 i~d~~~~~~~~~~~~h~~~i~~l~~sp~g---~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~-v~~sp~g 452 (502)
.||..+++.+..+..+. .....++++. ..+++++.||.|+.||..+++.+..+. ...++.. ..++++|
T Consensus 144 a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~-~~~pv~~~~~~~~dg 215 (369)
T 2hz6_A 144 MYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQN-YASPVVAFYVWQREG 215 (369)
T ss_dssp CCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEE-CSSCEEEEEECTTSS
T ss_pred EEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEec-CCCceEEEEEecCCc
Confidence 99999998876665321 2223344432 457778899999999999999988776 3445543 4555665
No 217
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.14 E-value=2.2e-08 Score=93.61 Aligned_cols=189 Identities=10% Similarity=0.049 Sum_probs=125.6
Q ss_pred CCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 214 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 214 H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
+...+.+++++|+|+++++ . ++.|.+||..+++.. .+... ........+..++++|+|+++++..
T Consensus 52 ~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~-----------~~~~~--~~~~~~~~~~di~~d~dG~l~~~~~ 116 (297)
T 3g4e_A 52 MDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAV-----------VLATV--DNDKKNNRFNDGKVDPAGRYFAGTM 116 (297)
T ss_dssp CSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEE-----------EEEEC--CTTCSSEEEEEEEECTTSCEEEEEE
T ss_pred CCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEE-----------EEEec--CCCCCCCCCCCEEECCCCCEEEecC
Confidence 3467999999999995554 4 467999998765421 11111 0011123478999999999776553
Q ss_pred CC-----------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEE-EecCCeEEEEEc--CCCceE--EEEe---
Q 010754 294 YD-----------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDV--KTEEWK--QQFE--- 354 (502)
Q Consensus 294 ~d-----------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~i~~wd~--~~~~~~--~~~~--- 354 (502)
.. +.|..++..+.... +..+......++|+|+++.|+. .+.++.|.+||+ .++... +.+.
T Consensus 117 ~~~~~~~~~~~~~~~l~~~d~~g~~~~-~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~ 195 (297)
T 3g4e_A 117 AEETAPAVLERHQGALYSLFPDHHVKK-YFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLE 195 (297)
T ss_dssp ECCSBTTBCCTTCEEEEEECTTSCEEE-EEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECC
T ss_pred CcccccccccCCCcEEEEEECCCCEEE-EeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECC
Confidence 21 34444454444333 3334455689999999987755 455789999997 455432 1221
Q ss_pred eccCCeEEEEecCCCE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEc-CCCCEEEEEeC
Q 010754 355 FHSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSD 418 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~s-p~g~~las~s~ 418 (502)
........+++.+++. +++....+.|..||..+++.+..+..+...+++++|. |+++.|..++.
T Consensus 196 ~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 196 KEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp GGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 2234567788866655 4455567889999999899998988887889999998 88876655543
No 218
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.14 E-value=3.8e-08 Score=93.42 Aligned_cols=186 Identities=12% Similarity=0.014 Sum_probs=122.5
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
...|.+++|+|+|+++++. .+ .|.+||..+++.. .+.... .......+.+++++|+|+++++...
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~-----------~~~~~~--~~~~~~~~~~i~~d~~G~l~v~~~~ 153 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLT-----------LHAELE--SDLPGNRSNDGRMHPSGALWIGTMG 153 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEE-----------EEECSS--TTCTTEEEEEEEECTTSCEEEEEEE
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEE-----------EEeeCC--CCCCCCCCCCEEECCCCCEEEEeCC
Confidence 4679999999999877764 44 4999998766421 111000 0011235889999999997765542
Q ss_pred ------CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcC--CC-ce--EEEEe---eccCC
Q 010754 295 ------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVK--TE-EW--KQQFE---FHSGP 359 (502)
Q Consensus 295 ------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~--~~-~~--~~~~~---~~~~~ 359 (502)
.+.|..++ .+.. ..+..+......++|+|+++.++.+ +.++.|.+||+. ++ .. ...+. .....
T Consensus 154 ~~~~~~~~~l~~~~-~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~ 231 (326)
T 2ghs_A 154 RKAETGAGSIYHVA-KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGG 231 (326)
T ss_dssp TTCCTTCEEEEEEE-TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSE
T ss_pred CcCCCCceEEEEEe-CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCC
Confidence 25566666 4433 3333344567899999999877655 457899999986 55 32 12222 12334
Q ss_pred eEEEEecCCCEEEEE-eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEc-CCCCEEEEEeC
Q 010754 360 TLDVDWRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSD 418 (502)
Q Consensus 360 v~~v~~~~~~~~~~~-~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~s-p~g~~las~s~ 418 (502)
...+.+.+++.+.++ ..++.|.+|+. +++.+..+..+...+++++|+ |+++.|+.++.
T Consensus 232 p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 232 MDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEB
T ss_pred CCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEec
Confidence 667888766655544 45688999998 577777787777789999998 88877655543
No 219
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=7.4e-08 Score=93.01 Aligned_cols=201 Identities=7% Similarity=-0.070 Sum_probs=124.4
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 220 ACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.++++|||++|+.+. .++.|.+||..+.+....+.... .... ........++|+|||++|
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~---------~~~~-~~g~~p~~~~~spDG~~l 139 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPD---------APRF-DVGPYSWMNANTPNNADL 139 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCC---------cccc-ccCCCccceEECCCCCEE
Confidence 899999999888886 36789999998765322111000 0000 001234588999999999
Q ss_pred EEEEC--CCeEEEEECCCceEEEe-cCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcCCCceEEE-------------
Q 010754 290 ATGSY--DGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQ------------- 352 (502)
Q Consensus 290 ~s~~~--dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~~~~~~~~------------- 352 (502)
+++.. ++.|.++| .+...... ...... +.+.|.+ ..+++.+.||.+.++|. +++....
T Consensus 140 ~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~---~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~ 214 (373)
T 2mad_H 140 LFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC---YHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNL 214 (373)
T ss_pred EEEecCCCCeEEEEE-CCCCEEeEEcCCCce---EEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcce
Confidence 99874 47899999 75443322 222221 2333433 33444555666666665 4433311
Q ss_pred -------------------------------------Eeec----------cCCeEEEEecCC-CEEEEEeC--------
Q 010754 353 -------------------------------------FEFH----------SGPTLDVDWRNN-VSFATSST-------- 376 (502)
Q Consensus 353 -------------------------------------~~~~----------~~~v~~v~~~~~-~~~~~~~~-------- 376 (502)
+... ......+.++++ ..+++...
T Consensus 215 ~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~ 294 (373)
T 2mad_H 215 LTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLH 294 (373)
T ss_pred eecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCccccc
Confidence 1000 000111333333 23333322
Q ss_pred --CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCeeEEEe
Q 010754 377 --DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCS-DDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 377 --d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s-~dg~i~iwd~~~~~~~~~~ 436 (502)
.+.|.++|..+.+.+.++.. .....+++|+|||+ +++++. .++.|.+||..+++.+..+
T Consensus 295 ~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 295 AAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred CCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 35799999999999888863 34688999999999 777777 5899999999999998874
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.06 E-value=4.1e-08 Score=95.64 Aligned_cols=212 Identities=9% Similarity=0.039 Sum_probs=130.9
Q ss_pred CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE----------CCCeEEEEECCCc
Q 010754 237 STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS----------YDGQARIWSTNGD 306 (502)
Q Consensus 237 g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~----------~dg~i~iwd~~~~ 306 (502)
+.|.++|..+.+.+. .+.. + ..+ .++++|||++++++. .++.|.++|....
T Consensus 99 ~~VsVID~~t~~vv~-------------~I~v---G-~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 99 TQQFVIDGSTGRILG-------------MTDG---G-FLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp EEEEEEETTTTEEEE-------------EEEE---C-SSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CeEEEEECCCCEEEE-------------EEEC---C-CCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 689999998876432 1111 0 123 899999999888886 3678999998753
Q ss_pred -eEEEecCc-------cCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEe-
Q 010754 307 -LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSS- 375 (502)
Q Consensus 307 -~~~~~~~~-------~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~- 375 (502)
....+... ......+.|+|+|++++++.. ++.|.+.|+.+++.+..+..... ..+.......+++.+
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~--~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC--YHIFPASPTVFYMNCR 237 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE--EEEEEEETTEEEEEET
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc--eeeccCCCcEEEEEcC
Confidence 33333211 123467899999999999874 57899999999998877764211 111111112222222
Q ss_pred ----------------------------------------------CCCeEEEEEcCCCcc--eEEEec---C-------
Q 010754 376 ----------------------------------------------TDNMIYVCKIGENRP--IKTFAG---H------- 397 (502)
Q Consensus 376 ----------------------------------------------~d~~i~i~d~~~~~~--~~~~~~---h------- 397 (502)
..+.+.+.|...... +..+.- .
T Consensus 238 dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 238 DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 334444444432211 001100 0
Q ss_pred CCcEEEEEEcCCCCEEEEEeC----------CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe-
Q 010754 398 QGEVNCVKWDPTGSLLASCSD----------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR- 466 (502)
Q Consensus 398 ~~~i~~l~~sp~g~~las~s~----------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las- 466 (502)
......++++|+++.++.... ++.|.+.|..+.+.+.++... .....|+|+|||. ..++++.
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~------~~lyv~n~ 390 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAE------PLLYALSA 390 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSS------CEEEEEET
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCC------EEEEEEcC
Confidence 001112688999887666532 357999999999999998733 2588999999985 1344444
Q ss_pred ecCceEEEEe
Q 010754 467 LIPYFLYWIC 476 (502)
Q Consensus 467 ~~~~~~iw~~ 476 (502)
.++.+.+++.
T Consensus 391 ~s~~VsVID~ 400 (426)
T 3c75_H 391 GTQTLHIYDA 400 (426)
T ss_dssp TTTEEEEEET
T ss_pred CCCeEEEEEC
Confidence 3678888864
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.98 E-value=1e-07 Score=91.18 Aligned_cols=186 Identities=11% Similarity=0.074 Sum_probs=123.7
Q ss_pred cCCCCeEEEEeC-----CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-----
Q 010754 224 SPAGSLLASGSG-----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS----- 293 (502)
Q Consensus 224 ~p~~~~l~sgs~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~----- 293 (502)
.|+++.++.... ++.|.+.|..+.+.+. .+.. + ..+ . ++++|||++++++.
T Consensus 41 ~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~-------------~I~v---G-~~P-~-va~spDG~~lyVan~~~~r 101 (386)
T 3sjl_D 41 APDARRVYVNDPAHFAAVTQQFVIDGEAGRVIG-------------MIDG---G-FLP-N-PVVADDGSFIAHASTVFSR 101 (386)
T ss_dssp CCCTTEEEEEECGGGCSSEEEEEEETTTTEEEE-------------EEEE---C-SSC-E-EEECTTSSCEEEEEEEEEE
T ss_pred CCCCCEEEEEcCcccCCCCEEEEEECCCCeEEE-------------EEEC---C-CCC-c-EEECCCCCEEEEEcccccc
Confidence 467776666654 5789999998876322 1111 1 122 3 99999999888876
Q ss_pred -----CCCeEEEEECCCce-EEEecCc-------cCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccC
Q 010754 294 -----YDGQARIWSTNGDL-KCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSG 358 (502)
Q Consensus 294 -----~dg~i~iwd~~~~~-~~~~~~~-------~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~ 358 (502)
.++.|.+||..+.. ...+... ......+.|+|+|++++++.. ++.|.++|+.+++.+.++....
T Consensus 102 ~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g- 180 (386)
T 3sjl_D 102 IARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD- 180 (386)
T ss_dssp TTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-
T ss_pred cccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-
Confidence 35789999987543 3333211 123567999999999998874 6899999999999998885432
Q ss_pred CeEEEEecCCCEEEEEeCCCeEEEEEcCC-CcceEEEecCC----CcEE-EEEEc-CCCCEEEEEeCCCcEEEEECCCCe
Q 010754 359 PTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAGHQ----GEVN-CVKWD-PTGSLLASCSDDVTAKIWNMKQDK 431 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d~~i~i~d~~~-~~~~~~~~~h~----~~i~-~l~~s-p~g~~las~s~dg~i~iwd~~~~~ 431 (502)
+..+.-.....|++.+.||.+.+.++.. ++.+.+...+. .++. ...|. ++|++++ .+.+|.|++.|+.+..
T Consensus 181 -~~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~ 258 (386)
T 3sjl_D 181 -CYHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGD 258 (386)
T ss_dssp -EEEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSS
T ss_pred -cceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCc
Confidence 2222223345688889999999999976 55433222111 1221 24564 6776555 5668999999997654
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.97 E-value=3e-08 Score=93.96 Aligned_cols=215 Identities=16% Similarity=0.060 Sum_probs=148.4
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCCc
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD 306 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~ 306 (502)
+..|..++.++.+..+|.. ++... . .. .....+.++...+++. +..|+.++.|..||..+.
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~------------~-~~----~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~g~ 167 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKW------------R-FK----TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPDGT 167 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEE------------E-EE----CSSCCCSCCEECTTSC-EEEECTTSEEEEECTTSC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEE------------E-Ec----CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCCCC
Confidence 4567778888899999876 43211 0 00 0122355566667776 556778899999998866
Q ss_pred eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcC
Q 010754 307 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG 386 (502)
Q Consensus 307 ~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~ 386 (502)
....+......+.++...+++...+ ++ +.|..|| .+++....+......+.++...+++.+.+++.++.|..++.
T Consensus 168 ~~~~~~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~- 242 (330)
T 3hxj_A 168 EKWRFKTNDAITSAASIGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSLDGHLYAINP- 242 (330)
T ss_dssp EEEEEECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEETTTEEEEECT-
T ss_pred EeEEEecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcCCCeEEEECC-
Confidence 6666655556677788877777554 44 8899999 77777777665556677777777778888888899998974
Q ss_pred CCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEe
Q 010754 387 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAR 466 (502)
Q Consensus 387 ~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las 466 (502)
++..+..+......+..+.+.+++. |..++.+|.|..+|. +++.+..+......+.++...++|. +.+++
T Consensus 243 ~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~--------l~~gt 312 (330)
T 3hxj_A 243 DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT--------IYFGT 312 (330)
T ss_dssp TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC--------EEEEC
T ss_pred CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE--------EEEEc
Confidence 5666666665544455566666664 556778888999995 6777766654445566666666665 78888
Q ss_pred ecCceEEEE
Q 010754 467 LIPYFLYWI 475 (502)
Q Consensus 467 ~~~~~~iw~ 475 (502)
.++.+.+..
T Consensus 313 ~~G~~~~~~ 321 (330)
T 3hxj_A 313 RNGKFYALF 321 (330)
T ss_dssp TTSCEEEEE
T ss_pred CCCeEEEEe
Confidence 888776653
No 223
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.94 E-value=8.2e-07 Score=81.42 Aligned_cols=218 Identities=7% Similarity=0.006 Sum_probs=141.5
Q ss_pred CceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-
Q 010754 216 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS- 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~- 293 (502)
..+..++|+|++. ++++-..++.|..+++...... .. .. ........+++++++..|+.+.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~-----------~~--~~----~~~~~p~~ia~d~~~~~lyv~d~ 98 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPT-----------TI--IR----QDLGSPEGIALDHLGRTIFWTDS 98 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCE-----------EE--EC----TTCCCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcE-----------EE--EE----CCCCCccEEEEEecCCeEEEEEC
Confidence 3567999999654 5555556789999998654310 00 00 1124578999999766555554
Q ss_pred CCCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEec---CCeEEEEEcCCCceEEEEe-eccCCeEEEEecCC
Q 010754 294 YDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTEEWKQQFE-FHSGPTLDVDWRNN 368 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~---d~~i~~wd~~~~~~~~~~~-~~~~~v~~v~~~~~ 368 (502)
..+.|.+++.++.....+.. .......++++|++..|+.+.. .+.|..+++.... ...+. ........+++.++
T Consensus 99 ~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~ 177 (267)
T 1npe_A 99 QLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAF 177 (267)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETT
T ss_pred CCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCC
Confidence 56899999988654433322 2245689999997666665554 3688888875433 33332 22345778888763
Q ss_pred -CE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC-cEEE
Q 010754 369 -VS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK-EIYT 445 (502)
Q Consensus 369 -~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~-~i~~ 445 (502)
+. +++....+.|.+++.........+.+ ......++.. .+.++++....+.|.++|..+++.+..+..... ..+.
T Consensus 178 ~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~g 255 (267)
T 1npe_A 178 SSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYG 255 (267)
T ss_dssp TTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCC
T ss_pred CCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccce
Confidence 44 45556678999999876544333332 3345677765 444555555678999999999999988874432 4678
Q ss_pred EEEccCCC
Q 010754 446 IRWSPTGS 453 (502)
Q Consensus 446 v~~sp~g~ 453 (502)
|++.|++-
T Consensus 256 i~~~~~~~ 263 (267)
T 1npe_A 256 ITIALSQC 263 (267)
T ss_dssp EEEECSCC
T ss_pred eeecCccC
Confidence 89998864
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.94 E-value=1e-10 Score=113.31 Aligned_cols=179 Identities=14% Similarity=0.107 Sum_probs=98.6
Q ss_pred CCCEEEEEECCCeEEEEECC-CceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-eE-
Q 010754 285 EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TL- 361 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-v~- 361 (502)
++..+++++.||.|+.||.. ++.+..+.. +.+.+..+..++..+++++.|+.|+.||..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 46789999999999999965 666666655 55555556667778888889999999999998876665433211 10
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 441 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~ 441 (502)
......++.+++++.++.|+.||..+++.+..+..+. ...++|++..|++++.|+.|+.||..+++.+..+..+.
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 0111235567788889999999999999888776554 24566788899999999999999999998776654221
Q ss_pred cEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 442 EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 442 ~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
....++++++ ..+..+++++.++.+..|+
T Consensus 161 -~~~~~~~~~~----~~~~~v~~~~~dg~v~a~d 189 (369)
T 2hz6_A 161 -YAASLPEDDV----DYKMSHFVSNGDGLVVTVD 189 (369)
T ss_dssp -ECCBCCCCCT----TCCCCEEEEETSCEEEEEC
T ss_pred -ccCccccCCc----cccceEEEECCCCEEEEEE
Confidence 1112222221 1124577777777777765
No 225
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.93 E-value=3.8e-08 Score=103.49 Aligned_cols=191 Identities=13% Similarity=0.142 Sum_probs=124.4
Q ss_pred CCCeEEEEECCCCCEEEEEE-----CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC-----------
Q 010754 274 SKDVTTLDWNGEGTLLATGS-----YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK----------- 337 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~----------- 337 (502)
...+..++|||||++||.+. ....|++||+.+...............++|+ |++.|+.++.+.
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 34688899999999888543 2257999998865543332222223578999 999999888774
Q ss_pred --eEEEEEcCCCce--EEEEee---ccCCeEEEEecCCCEEE--EEe---CCCeEEEEEcCCCc-ceEEEecCCCcEEEE
Q 010754 338 --TAIVWDVKTEEW--KQQFEF---HSGPTLDVDWRNNVSFA--TSS---TDNMIYVCKIGENR-PIKTFAGHQGEVNCV 404 (502)
Q Consensus 338 --~i~~wd~~~~~~--~~~~~~---~~~~v~~v~~~~~~~~~--~~~---~d~~i~i~d~~~~~-~~~~~~~h~~~i~~l 404 (502)
.|++|++.++.. ...+.. +......+.|++++..+ +.+ ..+.|+++|+.++. ....+..+.......
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 399999987653 233332 23346788998887633 332 23589999998764 455666666666555
Q ss_pred EEcCCCCEEEE-EeCC---CcEEEEECCCCee--EEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeec-CceEEEE
Q 010754 405 KWDPTGSLLAS-CSDD---VTAKIWNMKQDKY--VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLI-PYFLYWI 475 (502)
Q Consensus 405 ~~sp~g~~las-~s~d---g~i~iwd~~~~~~--~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~-~~~~iw~ 475 (502)
|+++|..|+. ...+ +.|.+||+.++.. ...+..|...+. .|+|+|. .|++...+ +..+++.
T Consensus 287 -~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~-------~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 287 -VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSG-------YLFAEYMVDATARVEQ 354 (693)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETT-------EEEEEEEETTEEEEEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECC-------EEEEEEEECCeeEEEE
Confidence 6666665544 4433 6799999987654 345555665555 8999987 55555544 3334444
No 226
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.93 E-value=3.4e-07 Score=89.11 Aligned_cols=219 Identities=11% Similarity=0.063 Sum_probs=128.1
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 220 ACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.++++|||++|+.+. .++.|.++|..+.+....+. +.. ... .........+.|+|||+++
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~--------v~g-~~r-~~~g~~P~~~~~spDGk~l 191 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIE--------LPD-APR-FLVGTYQWMNALTPDNKNL 191 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEE--------ETT-CCC-CCBSCCGGGSEECTTSSEE
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEE--------CCC-ccc-cccCCCcceEEEcCCCCEE
Confidence 799999999888776 36789999998876432110 000 000 0001234578899999999
Q ss_pred EEEEC--CCeEEEEECCCce-EEEecCcc-------CCeEEEEEecCCC-------------------------------
Q 010754 290 ATGSY--DGQARIWSTNGDL-KCTLSKHK-------GPIFSLKWNKKGD------------------------------- 328 (502)
Q Consensus 290 ~s~~~--dg~i~iwd~~~~~-~~~~~~~~-------~~v~~l~~~~~~~------------------------------- 328 (502)
+++.. ++.|.+.|+.... +..+.... +.-.-+.++++|+
T Consensus 192 yV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~ 271 (426)
T 3c75_H 192 LFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPA 271 (426)
T ss_dssp EEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCE
T ss_pred EEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEee
Confidence 99875 5789999987533 33332100 0001122333333
Q ss_pred ------EEEEEecCCeEEEEEcCCCceE--EEEeec----------cCCeEEEEecCC-CE-EEEEe---------CCCe
Q 010754 329 ------YLLTGSCDKTAIVWDVKTEEWK--QQFEFH----------SGPTLDVDWRNN-VS-FATSS---------TDNM 379 (502)
Q Consensus 329 ------~l~s~~~d~~i~~wd~~~~~~~--~~~~~~----------~~~v~~v~~~~~-~~-~~~~~---------~d~~ 379 (502)
.++..+..+.|.+.|+...... ..+... ......+.++++ .+ +++.. .++.
T Consensus 272 ~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~ 351 (426)
T 3c75_H 272 FSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF 351 (426)
T ss_dssp ECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE
T ss_pred ecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE
Confidence 3333333344444444332211 001000 000111344433 33 44332 1357
Q ss_pred EEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCeeEEEe-ccCCCcEEEEEEccC
Q 010754 380 IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCS-DDVTAKIWNMKQDKYVHDL-REHSKEIYTIRWSPT 451 (502)
Q Consensus 380 i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s-~dg~i~iwd~~~~~~~~~~-~~h~~~i~~v~~sp~ 451 (502)
|.++|..+.+.+.++... ....+|.|+|+|+ +++++. .++.|.|+|+.+++.+.++ .....+. +..+||
T Consensus 352 VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~--~i~~~~ 423 (426)
T 3c75_H 352 VVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQ--IITTHD 423 (426)
T ss_dssp EEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCC--EEECCC
T ss_pred EEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCc--EEEcCC
Confidence 999999999999888633 3588999999999 888887 5899999999999999887 3222222 555554
No 227
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.91 E-value=2.2e-06 Score=77.62 Aligned_cols=191 Identities=10% Similarity=0.042 Sum_probs=128.5
Q ss_pred CeEEEEECCCCCEEEEEEC--CCeEEEEECCC-ceEEEecCcc-CCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCceE
Q 010754 276 DVTTLDWNGEGTLLATGSY--DGQARIWSTNG-DLKCTLSKHK-GPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWK 350 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~--dg~i~iwd~~~-~~~~~~~~~~-~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~ 350 (502)
....+.|++++.++++.+. ++.|+++|... +....+.... .....+++. ++.|+.+ -.++.+.++|..+.+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~ 99 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNI 99 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEE
Confidence 4689999998755554443 57999999874 4444433211 122345554 4555544 45789999999999999
Q ss_pred EEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 351 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 351 ~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
.++......-..+++... .++++..++.|.++|..+.+.+..+.-.. ..++.+.|. +|.+.+....++.|.+.
T Consensus 100 ~~i~~g~~~g~glt~Dg~-~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vI 177 (266)
T 2iwa_A 100 KNFTHQMKDGWGLATDGK-ILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARI 177 (266)
T ss_dssp EEEECCSSSCCEEEECSS-SEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEE
T ss_pred EEEECCCCCeEEEEECCC-EEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEE
Confidence 888644122344665444 44455578999999999988887776321 247788888 77666666668899999
Q ss_pred ECCCCeeEEEeccCC-------------CcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 426 NMKQDKYVHDLREHS-------------KEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 426 d~~~~~~~~~~~~h~-------------~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
|..+++.+..+.... ...+.|+|+|++. .+++ +....-+++...+
T Consensus 178 D~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~-------~lfV-Tgk~~~~v~~i~l 235 (266)
T 2iwa_A 178 SAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK-------RIFV-TGKLWPKLFEIKL 235 (266)
T ss_dssp ETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT-------EEEE-EETTCSEEEEEEE
T ss_pred ECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC-------EEEE-ECCCCCeEEEEEE
Confidence 999999998886321 2468999999987 4444 4444444554443
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=5.1e-08 Score=93.34 Aligned_cols=225 Identities=10% Similarity=-0.060 Sum_probs=133.6
Q ss_pred cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE----------CCCeEEEEECCC-c
Q 010754 238 TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS----------YDGQARIWSTNG-D 306 (502)
Q Consensus 238 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~----------~dg~i~iwd~~~-~ 306 (502)
+|.++|..+.+.+. .+.. + ..+ .+.++|||++++++. .++.|.+||... +
T Consensus 47 ~vsvID~~t~~v~~-------------~i~v---G-~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~ 107 (368)
T 1mda_H 47 ENWVSCAGCGVTLG-------------HSLG---A-FLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFL 107 (368)
T ss_dssp EEEEEETTTTEEEE-------------EEEE---C-TTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCC
T ss_pred eEEEEECCCCeEEE-------------EEeC---C-CCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCC
Confidence 78899988876422 1111 1 123 799999999999886 368999999875 4
Q ss_pred eEEEecCc-------cCCeEEEEEecCCCEEEEEec--CCeEEE--EEcCCCceEEEEeecc------------------
Q 010754 307 LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIV--WDVKTEEWKQQFEFHS------------------ 357 (502)
Q Consensus 307 ~~~~~~~~-------~~~v~~l~~~~~~~~l~s~~~--d~~i~~--wd~~~~~~~~~~~~~~------------------ 357 (502)
....+... ......+.++|+|++++++.. +..|.+ +|..+ +..+....
T Consensus 108 vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~d 184 (368)
T 1mda_H 108 PIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCP 184 (368)
T ss_dssp EEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCT
T ss_pred EEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCC
Confidence 44444322 123568999999999998875 467888 99866 33332100
Q ss_pred CCeEEEEe---------------------------cCCCEEEEEeCCCeEEEEEcCCCc--ceEEEec-------CC---
Q 010754 358 GPTLDVDW---------------------------RNNVSFATSSTDNMIYVCKIGENR--PIKTFAG-------HQ--- 398 (502)
Q Consensus 358 ~~v~~v~~---------------------------~~~~~~~~~~~d~~i~i~d~~~~~--~~~~~~~-------h~--- 398 (502)
+.+..+.. ..+..++..+. +.+.+.|..... .+..+.. +.
T Consensus 185 g~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 185 ASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp TSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred CCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 00111111 11122222223 555566654321 1111110 00
Q ss_pred CcEEEEEEcCCCCEEEEEeC---------CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEee--
Q 010754 399 GEVNCVKWDPTGSLLASCSD---------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARL-- 467 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~---------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~-- 467 (502)
.....++++|+++.++.+.. ++.+.++|+.+.+.+..+.... ....|+|+|||. .++.+..
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~-------~l~va~~~~ 335 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGA-------SDNYANSAG 335 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSS-------CEEEEEETT
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCC-------EEEEEccCC
Confidence 01112689999988776532 2356699999999999887443 588999999997 5666665
Q ss_pred cCceEEEEeeeEEEeeecccccCccee
Q 010754 468 IPYFLYWICSIYFKYFGTTERANLPLH 494 (502)
Q Consensus 468 ~~~~~iw~~~~~~~~~g~~~~~~~~~~ 494 (502)
++.+.+++... .....++.....|-.
T Consensus 336 ~~~VsVID~~t-~kvv~~I~vg~~P~~ 361 (368)
T 1mda_H 336 TEVLDIYDAAS-DQDQSSVELDKGPES 361 (368)
T ss_dssp TTEEEEEESSS-CEEEEECCCCSCCCE
T ss_pred CCeEEEEECCC-CcEEEEEECCCCCCE
Confidence 78888887532 233344444444433
No 229
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=1.5e-07 Score=89.87 Aligned_cols=194 Identities=9% Similarity=0.052 Sum_probs=123.5
Q ss_pred CCeEEEEECCCCCEEEEEE--CCCeEEEEECCCceEEEec-------CccCCeEEEEEecCCCEEEEEec-----CCeEE
Q 010754 275 KDVTTLDWNGEGTLLATGS--YDGQARIWSTNGDLKCTLS-------KHKGPIFSLKWNKKGDYLLTGSC-----DKTAI 340 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~--~dg~i~iwd~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~s~~~-----d~~i~ 340 (502)
..+..++++++|+++++.. .++.++||.+.......+. .+-..+.+++++++++.+++-.. ++.|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 4589999999999988864 2343555544322233221 24467899999999875555433 57999
Q ss_pred EEEcCCCceEEEEeecc------CCeEEEEecC-CCE-EEEEe---CCCeEEEEEcCCCcceEEEecCC-----------
Q 010754 341 VWDVKTEEWKQQFEFHS------GPTLDVDWRN-NVS-FATSS---TDNMIYVCKIGENRPIKTFAGHQ----------- 398 (502)
Q Consensus 341 ~wd~~~~~~~~~~~~~~------~~v~~v~~~~-~~~-~~~~~---~d~~i~i~d~~~~~~~~~~~~h~----------- 398 (502)
+||+.+++.+..+.... ..+.++.+.+ ++. +++.. .++.|.+||+.+++....+.+|.
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 99999998777776432 2457788874 344 45544 57899999998877655553321
Q ss_pred ------------------CcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----Ce-----eEE--EeccCCCcEEEEEE
Q 010754 399 ------------------GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ-----DK-----YVH--DLREHSKEIYTIRW 448 (502)
Q Consensus 399 ------------------~~i~~l~~sp~g~~las~s~dg~i~iwd~~~-----~~-----~~~--~~~~h~~~i~~v~~ 448 (502)
..++.|+|+|+|+.|+.+..++. ++|.+.+ +. ... ...++......+++
T Consensus 177 ~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgia~ 255 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGISI 255 (343)
T ss_dssp TTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCEEE
T ss_pred CCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCCCCChhhhhcceEecccCCCCceEEE
Confidence 23688999999999988877663 4454321 10 000 11123334567888
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
+++|. .++.....+.+.+|..
T Consensus 256 d~~G~-------l~va~~~~~~V~~~d~ 276 (343)
T 2qe8_A 256 DKDHN-------IYVGDLAHSAIGVITS 276 (343)
T ss_dssp CTTCC-------EEEEEGGGTEEEEEET
T ss_pred CCCCC-------EEEEccCCCeEEEEEC
Confidence 88886 3333334466777764
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.88 E-value=2.4e-07 Score=89.31 Aligned_cols=225 Identities=9% Similarity=0.128 Sum_probs=142.0
Q ss_pred CCCCeEE-EEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeec-Ccc--ccCCCCeEEEEECCCCCEEEEEECC-----
Q 010754 225 PAGSLLA-SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRT--NEKSKDVTTLDWNGEGTLLATGSYD----- 295 (502)
Q Consensus 225 p~~~~l~-sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~--~~~~~~v~~l~~s~~g~~l~s~~~d----- 295 (502)
+++++|+ +|..+++|.|+|+.+.... ....+.+. ... ......-..+...|+| +++++..+
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~---------p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE---------PKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEG 162 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS---------CEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCS
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC---------ceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCC
Confidence 7776555 5566889999998654211 11111121 000 0001134567778999 77776655
Q ss_pred -CeEEEEECCC-ceEEEecCccC---CeEEEEEecCCCEEEEEe-------------------cCCeEEEEEcCCCceEE
Q 010754 296 -GQARIWSTNG-DLKCTLSKHKG---PIFSLKWNKKGDYLLTGS-------------------CDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 296 -g~i~iwd~~~-~~~~~~~~~~~---~v~~l~~~~~~~~l~s~~-------------------~d~~i~~wd~~~~~~~~ 351 (502)
|.|.++|..+ ..+........ --+.+-|+|+++.+++.. .+.+|.+||+.+++.++
T Consensus 163 ~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~ 242 (462)
T 2ece_A 163 PGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIH 242 (462)
T ss_dssp CCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEE
T ss_pred CCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEee
Confidence 7899999774 55555543222 235688899999998885 36899999999998888
Q ss_pred EEeecc--CCeEEEEe--cCCCE--EEEEe-----CCCeEEEEEcCCCc--ceEEE--ecC----------------CCc
Q 010754 352 QFEFHS--GPTLDVDW--RNNVS--FATSS-----TDNMIYVCKIGENR--PIKTF--AGH----------------QGE 400 (502)
Q Consensus 352 ~~~~~~--~~v~~v~~--~~~~~--~~~~~-----~d~~i~i~d~~~~~--~~~~~--~~h----------------~~~ 400 (502)
++.... .....+.| ++++. ++++- .++.|.+|....+. ..+.+ ... ...
T Consensus 243 tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~ 322 (462)
T 2ece_A 243 SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPL 322 (462)
T ss_dssp EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCC
T ss_pred EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCc
Confidence 877531 23444544 77654 45555 77788877665442 11111 110 234
Q ss_pred EEEEEEcCCCCEEEEEeC-CCcEEEEECC---CCeeEEEeccCC--------------CcEEEEEEccCCCCCCCCCccE
Q 010754 401 VNCVKWDPTGSLLASCSD-DVTAKIWNMK---QDKYVHDLREHS--------------KEIYTIRWSPTGSGTNNPNQQL 462 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~-dg~i~iwd~~---~~~~~~~~~~h~--------------~~i~~v~~sp~g~~~~~~~~~l 462 (502)
...|.+||||++|..+.. .+.|.+||+. +.+.+..+.... +.-..++++|||. .+
T Consensus 323 pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk-------~L 395 (462)
T 2ece_A 323 VTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR-------RV 395 (462)
T ss_dssp CCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS-------EE
T ss_pred eeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC-------EE
Confidence 678999999999877665 7899999985 345555554221 1247899999998 66
Q ss_pred EEEe
Q 010754 463 ILAR 466 (502)
Q Consensus 463 ~las 466 (502)
+++.
T Consensus 396 yVaN 399 (462)
T 2ece_A 396 YVTN 399 (462)
T ss_dssp EEEC
T ss_pred EEEc
Confidence 6665
No 231
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=3.8e-07 Score=82.56 Aligned_cols=193 Identities=10% Similarity=0.019 Sum_probs=130.4
Q ss_pred eEEEEEcCCCCeEEEEeC--CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-C
Q 010754 218 VCACAWSPAGSLLASGSG--DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-Y 294 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-~ 294 (502)
...++|+|++.++++.+. ++.|+++|+.+++...... + +.......+++. +..|+.+. .
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-----------l-----~~~~fgeGi~~~--g~~lyv~t~~ 84 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK-----------M-----DDSYFGEGLTLL--NEKLYQVVWL 84 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-----------C-----CTTCCEEEEEEE--TTEEEEEETT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-----------c-----CCCcceEEEEEe--CCEEEEEEec
Confidence 579999998755555443 5899999999987432111 0 011123345554 44555444 5
Q ss_pred CCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-----CeEEEEecCC
Q 010754 295 DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-----PTLDVDWRNN 368 (502)
Q Consensus 295 dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-----~v~~v~~~~~ 368 (502)
++.+.++|... +.+..+...... ...++++|+.++++..++.|.++|..+.+.+..+..... .+..+.|.++
T Consensus 85 ~~~v~viD~~t~~v~~~i~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 85 KNIGFIYDRRTLSNIKNFTHQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp CSEEEEEETTTTEEEEEEECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred CCEEEEEECCCCcEEEEEECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECC
Confidence 78999999875 444454322122 233556787777777789999999999998888764322 3567788855
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEecC-------------CCcEEEEEEcCCCCE-EEEEeCCCcEEEEECCCC
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAGH-------------QGEVNCVKWDPTGSL-LASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-------------~~~i~~l~~sp~g~~-las~s~dg~i~iwd~~~~ 430 (502)
..++....++.|.+.|..+++.+.++.-. ....+.|+|+|+++. ++++...+.|.+.++...
T Consensus 163 ~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 163 EVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 44555556899999999999998888632 135689999999865 556667788888887543
No 232
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.85 E-value=1.2e-06 Score=78.35 Aligned_cols=173 Identities=11% Similarity=0.163 Sum_probs=121.8
Q ss_pred CeEEEEECCCCCEEEEEECCC--eEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDG--QARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQ 351 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg--~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~ 351 (502)
....+.|+ ++.++.+++.+| .|+++|+.+ +....... ..........+.++.|+... .++.+.+||..+.+.+.
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 35788898 677777777766 899999875 44444432 33444433334455666554 48899999999999999
Q ss_pred EEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 352 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 352 ~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
++.... .-..+++.. ..++.+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|++.+..-.++.|.+.|
T Consensus 122 ti~~~~-eG~glt~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vID 198 (262)
T 3nol_A 122 SFNYDG-EGWGLTHND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRID 198 (262)
T ss_dssp EEECSS-CCCCEEECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEC
T ss_pred EEECCC-CceEEecCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEE
Confidence 987643 224555443 445555557889999999998888775421 345668887 787666666788999999
Q ss_pred CCCCeeEEEeccC------------CCcEEEEEEccCCC
Q 010754 427 MKQDKYVHDLREH------------SKEIYTIRWSPTGS 453 (502)
Q Consensus 427 ~~~~~~~~~~~~h------------~~~i~~v~~sp~g~ 453 (502)
..+++.+..+... ..-.+.|||+|++.
T Consensus 199 p~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 199 PETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp TTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred CCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 9999998877632 12468999999987
No 233
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.78 E-value=4.7e-07 Score=86.66 Aligned_cols=216 Identities=8% Similarity=-0.025 Sum_probs=126.9
Q ss_pred EEEEcCCCCeEEEEe----------CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 220 ACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs----------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
.+.++||+++++++. .+++|.+||+.+.+....+. ...............++++|||+++
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~----------v~~~~~~~~g~~P~~ia~SpDGk~l 138 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE----------LPDAPRFSVGPRVHIIGNCASSACL 138 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE----------ETTSCSCCBSCCTTSEEECTTSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE----------CCCccccccCCCcceEEEcCCCCEE
Confidence 799999999888886 36889999999877432111 0000000001235678999999999
Q ss_pred EEEEC--CCeEEE--EECCCceEEEecCc------------------cCCeEEEEE------------------------
Q 010754 290 ATGSY--DGQARI--WSTNGDLKCTLSKH------------------KGPIFSLKW------------------------ 323 (502)
Q Consensus 290 ~s~~~--dg~i~i--wd~~~~~~~~~~~~------------------~~~v~~l~~------------------------ 323 (502)
+++.. +..|.+ +|... ...+... .+.+..+..
T Consensus 139 yVan~~~~~~v~V~~iD~~t--v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P 216 (368)
T 1mda_H 139 LFFLFGSSAAAGLSVPGASD--DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQA 216 (368)
T ss_dssp EEEECSSSCEEEEEETTTEE--EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCC
T ss_pred EEEccCCCCeEEEEEEchhh--ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCc
Confidence 99875 367888 88754 2222100 000000000
Q ss_pred --ecCCCEEEEEecCCeEEEEEcCCCc--eEEEEeec----------cCCeEEEEecCC-CEEEEE-e---C-----CCe
Q 010754 324 --NKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFH----------SGPTLDVDWRNN-VSFATS-S---T-----DNM 379 (502)
Q Consensus 324 --~~~~~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~----------~~~v~~v~~~~~-~~~~~~-~---~-----d~~ 379 (502)
.+++..++..+. +.|.+.|+.+.. .+..+... ......+.++++ ..++++ . . ++.
T Consensus 217 ~~~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~ 295 (368)
T 1mda_H 217 AQANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAEN 295 (368)
T ss_dssp EEETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEE
T ss_pred cccccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCC
Confidence 222333333333 556666654322 11111100 000111455544 344433 3 2 245
Q ss_pred EEEEEcCCCcceEEEecCCCcEEEEEEcCCCC-EEEEEe-CCCcEEEEECCCCeeEEEeccCCCcEEEEEEcc
Q 010754 380 IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCS-DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 450 (502)
Q Consensus 380 i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~-~las~s-~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp 450 (502)
+.++|+.+.+.+.++.... ...+|+|+|+|+ +++++. .++.|.++|+.+++.+..+..... ...+++.+
T Consensus 296 ~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~ 366 (368)
T 1mda_H 296 TSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQN 366 (368)
T ss_dssp EEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCC
T ss_pred EEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeec
Confidence 6699999999888876443 588999999997 566666 599999999999999999985544 34565554
No 234
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.78 E-value=7.8e-07 Score=79.56 Aligned_cols=184 Identities=12% Similarity=0.118 Sum_probs=123.2
Q ss_pred cCCCc--eEEEEEcCCCCeEEEEeCCC--cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 213 GHTSE--VCACAWSPAGSLLASGSGDS--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 213 ~H~~~--V~~~~~~p~~~~l~sgs~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
.|... ...+.|+ ++.++.+.+.+| .|+++|+.+++...... + .....--.++. ++..
T Consensus 38 phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~-----------l-----~~~~FgeGit~--~g~~ 98 (262)
T 3nol_A 38 PHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE-----------L-----GKRYFGEGISD--WKDK 98 (262)
T ss_dssp ECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE-----------C-----CTTCCEEEEEE--ETTE
T ss_pred cCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe-----------c-----CCccceeEEEE--eCCE
Confidence 45433 4789998 677777777765 89999999987432111 0 00111222333 3445
Q ss_pred EEEEE-CCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc-----CCeE
Q 010754 289 LATGS-YDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-----GPTL 361 (502)
Q Consensus 289 l~s~~-~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-----~~v~ 361 (502)
|.... .++.+.+||... +.+..+.... .=+.++ +++..|+.+..++.|.++|..+.+.+..+.... ..+.
T Consensus 99 ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 99 IVGLTWKNGLGFVWNIRNLRQVRSFNYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp EEEEESSSSEEEEEETTTCCEEEEEECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred EEEEEeeCCEEEEEECccCcEEEEEECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 55554 578999999864 4444554322 223444 567777777668899999999999888876532 2345
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC------------CCcEEEEEEcCCCCEEEEEeC
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH------------QGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h------------~~~i~~l~~sp~g~~las~s~ 418 (502)
.+.|..+..++..-.++.|.+.|..+++.+..+... ..-.+.|+|+|+++.|...+.
T Consensus 176 ELe~~~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 176 ELEWVDGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EEEEETTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred eeEEECCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 678876655655557889999999999998887642 135689999998877766664
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.78 E-value=2.4e-08 Score=94.66 Aligned_cols=202 Identities=13% Similarity=0.073 Sum_probs=117.5
Q ss_pred EEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEE
Q 010754 222 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 301 (502)
Q Consensus 222 ~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iw 301 (502)
....++ .|..++.++.|..|| .+++...... .....+.++...++|. |..++.+ |..+
T Consensus 26 ~~d~~g-~l~v~t~~~~l~~~d-~~g~~~~~~~-----------------~~~~~~~~~~~~~~g~-l~v~t~~--l~~~ 83 (330)
T 3hxj_A 26 ILAKNG-TIYLGSSNKNLYAIN-TDGSVKWFFK-----------------SGEIIECRPSIGKDGT-IYFGSDK--VYAI 83 (330)
T ss_dssp EECTTS-CEECSSTTTTTEEEC-TTSCEEESSC-----------------GGGEEEECCEETTTTE-ECCSSCE--EEEE
T ss_pred eEccCC-eEEEEcCCCEEEEEC-CCCcEEEEEe-----------------cCCCcccceEEecCCc-EEEecCc--EEEE
Confidence 343444 455666778888888 6655321110 0112245556666654 3444443 7777
Q ss_pred ECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEE
Q 010754 302 STNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIY 381 (502)
Q Consensus 302 d~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~ 381 (502)
|..+.....+...........+. +..++.++.++.|..+|.. ++....+......+.++...+++.+.+++.++.|.
T Consensus 84 d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~ 160 (330)
T 3hxj_A 84 NPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLY 160 (330)
T ss_dssp CCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEE
T ss_pred CCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEE
Confidence 76544333222222222223333 4567777778888888877 66666555544445555555566677777778888
Q ss_pred EEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 382 VCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 382 i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.+|.. ++.+..+......+.++...+++.+++.+ +.|..|| .+++.+..+......+.++...++|.
T Consensus 161 ~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~ 227 (330)
T 3hxj_A 161 AINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT 227 (330)
T ss_dssp EECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC
T ss_pred EECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe
Confidence 88887 66666666555566677777777655443 6688888 66666665554445566666666654
No 236
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.77 E-value=1e-05 Score=76.31 Aligned_cols=223 Identities=9% Similarity=0.046 Sum_probs=137.0
Q ss_pred eccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecC-------------ccccCCCCe
Q 010754 211 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-------------RTNEKSKDV 277 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~v 277 (502)
+.+.-....+++|.++++++.++..++.|..|+..++... .+..... ........+
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~-----------~~~~~~~~~~~~~~~g~~~~~~~~~~~~p 82 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFV-----------DFAYASPYWNKAFCENSTDAEKRPLCGRT 82 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEE-----------EEEESCTTCCHHHHTTCCCGGGHHHHCCE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceE-----------EEecccccccccccccccchhccccCCCC
Confidence 3333344567899999998888888999999987654321 0000000 000011357
Q ss_pred EEEEECC-CCCEEEEEECCCeEEEEECCCceEEEecCc-----cCCeEEEEEec-CCCEEEEEec---------------
Q 010754 278 TTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNK-KGDYLLTGSC--------------- 335 (502)
Q Consensus 278 ~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~-----~~~v~~l~~~~-~~~~l~s~~~--------------- 335 (502)
..+++.+ +|+ |+++...+.|..+|..+.....+... ......+++.+ +|+..++-..
T Consensus 83 ~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~ 161 (322)
T 2fp8_A 83 YDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTS 161 (322)
T ss_dssp EEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHT
T ss_pred ceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehccc
Confidence 8999998 555 55555556688888775543333221 13468899999 8886665432
Q ss_pred --CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE-EE-EEeCCCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCC
Q 010754 336 --DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FA-TSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 336 --d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~-~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~ 409 (502)
++.|..||..+++...... .......+++++++. ++ +-...+.|.+|++.... ....+....+ ...++++++
T Consensus 162 ~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 162 DKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNAD 239 (322)
T ss_dssp CCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTT
T ss_pred CCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCC
Confidence 3678999987776433222 223456788887753 44 44567899999987532 1222222223 788999999
Q ss_pred CCEEEEEeC----------CCcEEEEECCCCeeEEEeccCC----CcEEEEEE
Q 010754 410 GSLLASCSD----------DVTAKIWNMKQDKYVHDLREHS----KEIYTIRW 448 (502)
Q Consensus 410 g~~las~s~----------dg~i~iwd~~~~~~~~~~~~h~----~~i~~v~~ 448 (502)
|++.++... .+.|..+|. .++.+..+.... ..++++++
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE
T ss_pred CCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE
Confidence 997777654 466888886 477666665322 34556665
No 237
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.74 E-value=9e-07 Score=92.41 Aligned_cols=229 Identities=12% Similarity=0.109 Sum_probs=146.7
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC------CCeEE
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY------DGQAR 299 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~------dg~i~ 299 (502)
.+..|+.++.|+.|..+|..+++......... ............+ + .+..+++++. +|.|+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~-------~~~~~~~~~~~p~--v----~~~~v~v~~~~~~~~~~g~v~ 193 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFE-------GQKGSLTITGAPR--V----FKGKVIIGNGGAEYGVRGYIT 193 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTT-------TCCSSCBCCSCCE--E----ETTEEEECCBCTTTCCBCEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCc-------CcCcCcccccCcE--E----ECCEEEEEecccccCCCCEEE
Confidence 35678888899999999999987532111100 0000000001111 1 1345555543 68999
Q ss_pred EEECC-CceEEEecCccC--------------------------------CeEEEEEecCCCEEEEEecCC---------
Q 010754 300 IWSTN-GDLKCTLSKHKG--------------------------------PIFSLKWNKKGDYLLTGSCDK--------- 337 (502)
Q Consensus 300 iwd~~-~~~~~~~~~~~~--------------------------------~v~~l~~~~~~~~l~s~~~d~--------- 337 (502)
.||.. ++.+..+..... ....+.++|++..++.++.++
T Consensus 194 a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~ 273 (677)
T 1kb0_A 194 AYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRS 273 (677)
T ss_dssp EEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHS
T ss_pred EEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCC
Confidence 99975 565555543211 113578889888888877664
Q ss_pred ----------eEEEEEcCCCceEEEEeeccC---------CeEEEEec-CC---CEEEEEeCCCeEEEEEcCCCcceEEE
Q 010754 338 ----------TAIVWDVKTEEWKQQFEFHSG---------PTLDVDWR-NN---VSFATSSTDNMIYVCKIGENRPIKTF 394 (502)
Q Consensus 338 ----------~i~~wd~~~~~~~~~~~~~~~---------~v~~v~~~-~~---~~~~~~~~d~~i~i~d~~~~~~~~~~ 394 (502)
+|..+|..+|+.+..+..... ...-+... .+ ..++.++.+|.++++|..+++.+..+
T Consensus 274 ~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 274 PKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred ccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 599999999999888765221 11112221 22 45888899999999999999988766
Q ss_pred ecCC-----------CcE------------------------EEEEEcCCCCEEEEEeC---------------------
Q 010754 395 AGHQ-----------GEV------------------------NCVKWDPTGSLLASCSD--------------------- 418 (502)
Q Consensus 395 ~~h~-----------~~i------------------------~~l~~sp~g~~las~s~--------------------- 418 (502)
.... ..+ ..++++|++.++++...
T Consensus 354 ~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~ 433 (677)
T 1kb0_A 354 NFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGK 433 (677)
T ss_dssp ESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTS
T ss_pred cccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccc
Confidence 5221 011 14688999888877543
Q ss_pred ----------------------CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 419 ----------------------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 419 ----------------------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.|.|..||+.+++.+..+. +..++.+..++++|. .++.++.++.+++|+
T Consensus 434 ~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~-------~v~~g~~dg~l~a~D 504 (677)
T 1kb0_A 434 PQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGN-------VVFQGTADGRLVAYH 504 (677)
T ss_dssp TTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTT-------EEEEECTTSEEEEEE
T ss_pred cccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCC-------EEEEECCCCcEEEEE
Confidence 2789999999999988776 334455555666665 677788888888886
No 238
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.73 E-value=6.9e-06 Score=72.79 Aligned_cols=174 Identities=14% Similarity=0.115 Sum_probs=121.1
Q ss_pred CCeEEEEECCCCCEEEEEECCC--eEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEE-EecCCeEEEEEcCCCceE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDG--QARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDVKTEEWK 350 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg--~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s-~~~d~~i~~wd~~~~~~~ 350 (502)
.....+.|+. +.++.+.+.+| .|+.+|+.+. ...... -............++.|+. .-.++.+.+||..+.+.+
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~ 98 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-VPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPR 98 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-CCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEE
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-CCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEE
Confidence 4577899986 56666666654 8999998754 444333 2233333333333455554 445889999999999999
Q ss_pred EEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEE
Q 010754 351 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCSDDVTAKIW 425 (502)
Q Consensus 351 ~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----~~i~~l~~sp~g~~las~s~dg~i~iw 425 (502)
.++.... .-..+++.. ..++++..++.|.++|..+.+.+.++.-.. ..++.+.|. +|++.+..-.+..|.+.
T Consensus 99 ~ti~~~~-~Gwglt~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vI 175 (243)
T 3mbr_X 99 ARFRYPG-EGWALTSDD-SHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARI 175 (243)
T ss_dssp EEEECSS-CCCEEEECS-SCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEE
T ss_pred EEEeCCC-CceEEeeCC-CEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEE
Confidence 9988644 335666544 445555668999999999998888776432 356777776 77766666667899999
Q ss_pred ECCCCeeEEEeccC-------------CCcEEEEEEccCCC
Q 010754 426 NMKQDKYVHDLREH-------------SKEIYTIRWSPTGS 453 (502)
Q Consensus 426 d~~~~~~~~~~~~h-------------~~~i~~v~~sp~g~ 453 (502)
|..+++.+..+... ..-.+.|||+|++.
T Consensus 176 Dp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 176 DPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp CTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred ECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 99999998877622 12468999999876
No 239
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.71 E-value=3.4e-06 Score=88.23 Aligned_cols=228 Identities=9% Similarity=0.080 Sum_probs=142.8
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE------CCCeEEE
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------YDGQARI 300 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~------~dg~i~i 300 (502)
+..|+.++.|+.|..+|..+++..-...... ...........++. .++ .+++++ .+|.|+.
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~-------~~~~~~~~~~sP~v-----~~g-~v~vg~~~~~~~~~g~v~a 187 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA-------DHKRSYTITGAPRV-----VNG-KVVIGNGGAEFGVRGYVTA 187 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCS-------CTTSCCBCCSCCEE-----ETT-EEEECCBCTTTCCBCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcC-------CCCCCccccCCcEE-----ECC-EEEEEeCCCccCCCCEEEE
Confidence 5678888899999999999987532111100 00000000011111 134 444443 3689999
Q ss_pred EECC-CceEEEecCc-------------------------------cCCeEEEEEecCCCEEEEEecCCe----------
Q 010754 301 WSTN-GDLKCTLSKH-------------------------------KGPIFSLKWNKKGDYLLTGSCDKT---------- 338 (502)
Q Consensus 301 wd~~-~~~~~~~~~~-------------------------------~~~v~~l~~~~~~~~l~s~~~d~~---------- 338 (502)
||.. ++.+..+... ......+.++|++..++.++.++.
T Consensus 188 ~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~ 267 (689)
T 1yiq_A 188 YDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQA 267 (689)
T ss_dssp EETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTT
T ss_pred EECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCC
Confidence 9976 5555554311 001125788898889998887764
Q ss_pred ---------EEEEEcCCCceEEEEeecc---------CCeEEEEec-CC---CEEEEEeCCCeEEEEEcCCCcceEEEec
Q 010754 339 ---------AIVWDVKTEEWKQQFEFHS---------GPTLDVDWR-NN---VSFATSSTDNMIYVCKIGENRPIKTFAG 396 (502)
Q Consensus 339 ---------i~~wd~~~~~~~~~~~~~~---------~~v~~v~~~-~~---~~~~~~~~d~~i~i~d~~~~~~~~~~~~ 396 (502)
|..||..+|+.+..+.... .+....... .+ ..++.++.+|.++++|..+++.+.....
T Consensus 268 ~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~ 347 (689)
T 1yiq_A 268 KGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGI 347 (689)
T ss_dssp CSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred CCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccc
Confidence 9999999999998876521 122212211 12 2577888999999999999988744321
Q ss_pred CC-Cc--------------------------------------EEEEEEcCCCCEEEEEeC-------------------
Q 010754 397 HQ-GE--------------------------------------VNCVKWDPTGSLLASCSD------------------- 418 (502)
Q Consensus 397 h~-~~--------------------------------------i~~l~~sp~g~~las~s~------------------- 418 (502)
.. .. -..++|+|+..+|++.+.
T Consensus 348 ~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~ 427 (689)
T 1yiq_A 348 VPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFK 427 (689)
T ss_dssp SCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCT
T ss_pred cccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccc
Confidence 10 00 012688998888776532
Q ss_pred --------------------------CCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 419 --------------------------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 419 --------------------------dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
+|.|+.||+.+++.+..+..+. ++....++..|. .++.++.|+.++
T Consensus 428 ~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagg-------lvf~gt~dg~l~ 499 (689)
T 1yiq_A 428 SMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGN-------LVFEGSADGRVI 499 (689)
T ss_dssp TSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-------EEEEECTTSEEE
T ss_pred cccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCC-------EEEEECCCCcEE
Confidence 3789999999999988876443 333345555554 678888888888
Q ss_pred EEE
Q 010754 473 YWI 475 (502)
Q Consensus 473 iw~ 475 (502)
.|+
T Consensus 500 a~D 502 (689)
T 1yiq_A 500 AYA 502 (689)
T ss_dssp EEE
T ss_pred EEE
Confidence 886
No 240
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.70 E-value=1.5e-05 Score=74.65 Aligned_cols=225 Identities=12% Similarity=0.060 Sum_probs=135.2
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
.....++|+|+++++++-..++.|..|+...... ..... ...+..+++.++|+++++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~------------~~~~~-------~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ------------IHATV-------EGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE------------EEEEC-------SSEEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE------------EEEeC-------CCCceeEEEcCCCcEEEEeccC
Confidence 4567899999999777777788999998654210 00000 1358899999999966655443
Q ss_pred C--eEEEEECCCceEEEec--CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce-EEEEee---------ccCCeE
Q 010754 296 G--QARIWSTNGDLKCTLS--KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQFEF---------HSGPTL 361 (502)
Q Consensus 296 g--~i~iwd~~~~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-~~~~~~---------~~~~v~ 361 (502)
. .|..++........+. ........++..+.+..+++-..++.|.++|..++.. +..... ......
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2 4666665443332221 1122234555555544444444588999999876532 111110 111234
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCC-Ccc--eEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE--Ee
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGE-NRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH--DL 436 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~-~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~--~~ 436 (502)
.+....+..+++-...+.|..|++.. +.. ...+.. ......++++++|+++++....+.|.+++.. ++... .+
T Consensus 173 gis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 173 GLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp EEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred CcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 45322233456666788999999874 321 222221 1345678999999988877778899999975 65532 34
Q ss_pred ccCCCcEEEEEEc---cCCCCCCCCCccEEEEeec
Q 010754 437 REHSKEIYTIRWS---PTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 437 ~~h~~~i~~v~~s---p~g~~~~~~~~~l~las~~ 468 (502)
.......++++|. |++. .|++++..
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~-------~LyVt~~~ 278 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCT-------AIYVVTNG 278 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTT-------EEEEEECT
T ss_pred ccccCCceEEEEecccCCCC-------EEEEECCC
Confidence 3333568999999 8876 66666654
No 241
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.68 E-value=2.1e-06 Score=89.85 Aligned_cols=175 Identities=12% Similarity=0.069 Sum_probs=118.4
Q ss_pred EEEEECCCCCEEEEEECCCe-------------------EEEEECC-CceEEEecC--cc-------CCeEEEEEecCCC
Q 010754 278 TTLDWNGEGTLLATGSYDGQ-------------------ARIWSTN-GDLKCTLSK--HK-------GPIFSLKWNKKGD 328 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg~-------------------i~iwd~~-~~~~~~~~~--~~-------~~v~~l~~~~~~~ 328 (502)
..++++|++.+++.++.++. |..||.+ ++.+..+.. |. .++.......+|+
T Consensus 238 ~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 238 DSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCc
Confidence 36788898899999988764 9999976 555555543 21 1222222233554
Q ss_pred ---EEEEEecCCeEEEEEcCCCceEEEEeeccC-Ce--------------------------------------EEEEec
Q 010754 329 ---YLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-PT--------------------------------------LDVDWR 366 (502)
Q Consensus 329 ---~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-~v--------------------------------------~~v~~~ 366 (502)
.++.++.+|.++++|..+|+.+........ .. ..++++
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~d 397 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYN 397 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceEC
Confidence 788999999999999999998754432110 00 013444
Q ss_pred CC-CEEEEEeC---------------------------------------------CCeEEEEEcCCCcceEEEecCCCc
Q 010754 367 NN-VSFATSST---------------------------------------------DNMIYVCKIGENRPIKTFAGHQGE 400 (502)
Q Consensus 367 ~~-~~~~~~~~---------------------------------------------d~~i~i~d~~~~~~~~~~~~h~~~ 400 (502)
+. +.+++... +|.|+.||+.+++.+..+..+. .
T Consensus 398 p~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~ 476 (689)
T 1yiq_A 398 PDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-I 476 (689)
T ss_dssp TTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-S
T ss_pred CCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-C
Confidence 43 33333311 3789999999999988887553 3
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCC-cEEEEEEccCCC
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK-EIYTIRWSPTGS 453 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~-~i~~v~~sp~g~ 453 (502)
+..-.+...+.+++.|+.||.|+.||.++|+.+..++...+ ...-+.|..+|.
T Consensus 477 ~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 477 FNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp CCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred ccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 33335566788999999999999999999999988874422 224467788886
No 242
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.67 E-value=5e-06 Score=80.28 Aligned_cols=177 Identities=9% Similarity=0.030 Sum_probs=114.3
Q ss_pred CCEEEEEECCCeEEEEECC-CceEEEecCccCC----eE---EEEEec--CCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 286 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGP----IF---SLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 286 g~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~----v~---~l~~~~--~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
+..+++++.+|.|..+|.. +............ +. .+.-.| .+..++.++.++.+..+|..+++.+.....
T Consensus 188 ~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~ 267 (376)
T 3q7m_A 188 FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL 267 (376)
T ss_dssp TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC
T ss_pred CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC
Confidence 3567788889999999975 4554444321100 00 000111 246788888899999999999988766543
Q ss_pred ccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC-CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 356 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 356 ~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
.....+.. .++.+++++.++.|..+|..+++.+...... ...+...... +..|+.++.+|.|+++|..+++.+.
T Consensus 268 --~~~~~~~~-~~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~--~~~l~v~~~~g~l~~~d~~tG~~~~ 342 (376)
T 3q7m_A 268 --GSVNDFIV-DGNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVLY--NGNLVVGDSEGYLHWINVEDGRFVA 342 (376)
T ss_dssp --CCEEEEEE-ETTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEEE--TTEEEEECTTSEEEEEETTTCCEEE
T ss_pred --CCCCCceE-ECCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEEE--CCEEEEEeCCCeEEEEECCCCcEEE
Confidence 23333433 3667778888999999999999887766522 2223333332 5678889999999999999999887
Q ss_pred EeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 435 DLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 435 ~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+......+.+.....+ ..+++++.++.+..|.
T Consensus 343 ~~~~~~~~~~~~~~~~~--------~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 343 QQKVDSSGFQTEPVAAD--------GKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEECCTTCBCSCCEEET--------TEEEEEBTTSCEEEEE
T ss_pred EEecCCCcceeCCEEEC--------CEEEEEeCCCEEEEEe
Confidence 76643333322111112 3578888888777663
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.66 E-value=3.1e-06 Score=75.69 Aligned_cols=173 Identities=12% Similarity=0.107 Sum_probs=121.6
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~~~ 352 (502)
.....+.|+ ++.++.+.+.+|.|+++|+.+ +....+ -.......-..+.++.|+ +.-.++.+.+||..+.+.+.+
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~t 131 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERT 131 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEE
Confidence 345788887 466777777889999999874 444443 233343322233344444 444688999999999999999
Q ss_pred EeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC-----CcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 353 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~-----~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
+.... .-..+++. +..++.+..++.|.++|..+.+.+.++.-.. ..++.+.|. +|++.+..-.++.|.+.|.
T Consensus 132 i~~~~-eGwGLt~D-g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp 208 (268)
T 3nok_A 132 TRYSG-EGWGLCYW-NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDP 208 (268)
T ss_dssp EECSS-CCCCEEEE-TTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECT
T ss_pred EeCCC-ceeEEecC-CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeC
Confidence 87643 23455554 4456666679999999999998888775422 246778887 7776666667889999999
Q ss_pred CCCeeEEEeccC-------------CCcEEEEEEccCCC
Q 010754 428 KQDKYVHDLREH-------------SKEIYTIRWSPTGS 453 (502)
Q Consensus 428 ~~~~~~~~~~~h-------------~~~i~~v~~sp~g~ 453 (502)
.+++.+..+... ..-.+.|||+|++.
T Consensus 209 ~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 209 ATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp TTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred CCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 999998877632 13568999999876
No 244
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.66 E-value=1.9e-06 Score=89.90 Aligned_cols=175 Identities=9% Similarity=0.086 Sum_probs=121.0
Q ss_pred EEEEECCCCCEEEEEECCC-------------------eEEEEECC-CceEEEecC--cc-------CCeEEEEEecCC-
Q 010754 278 TTLDWNGEGTLLATGSYDG-------------------QARIWSTN-GDLKCTLSK--HK-------GPIFSLKWNKKG- 327 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg-------------------~i~iwd~~-~~~~~~~~~--~~-------~~v~~l~~~~~~- 327 (502)
..+++++++..++.++.++ .|..+|.+ ++.+..+.. |. .....+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~ 325 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGK 325 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTE
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCc
Confidence 4678889999999887764 48888876 455555432 21 122233344467
Q ss_pred --CEEEEEecCCeEEEEEcCCCceEEEEeeccCC-----------eE------------------------EEEecCC-C
Q 010754 328 --DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-----------TL------------------------DVDWRNN-V 369 (502)
Q Consensus 328 --~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-----------v~------------------------~v~~~~~-~ 369 (502)
..+++++.+|.++++|..+|+.+..+...... +. .++++++ +
T Consensus 326 ~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~ 405 (677)
T 1kb0_A 326 PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTG 405 (677)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTT
T ss_pred EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCC
Confidence 68899999999999999999988776532111 10 2345443 4
Q ss_pred EEEEEeC-------------------------------------------CCeEEEEEcCCCcceEEEecCCCcEEEEEE
Q 010754 370 SFATSST-------------------------------------------DNMIYVCKIGENRPIKTFAGHQGEVNCVKW 406 (502)
Q Consensus 370 ~~~~~~~-------------------------------------------d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~ 406 (502)
.+++... .+.|..||+.+++.+..+. +..++....+
T Consensus 406 ~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~-~~~~~~~g~~ 484 (677)
T 1kb0_A 406 LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVE-HVSPWNGGTL 484 (677)
T ss_dssp EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEE-ESSSCCCCEE
T ss_pred EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecC-CCCCCcCcce
Confidence 4444322 2789999999999888876 3344455556
Q ss_pred cCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC-CcEEEEEEccCCC
Q 010754 407 DPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-KEIYTIRWSPTGS 453 (502)
Q Consensus 407 sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~-~~i~~v~~sp~g~ 453 (502)
...+.+++.++.||.+++||..+++.+..+.... ....-+.|.++|.
T Consensus 485 ~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 485 TTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp EETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred EeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCE
Confidence 6778889999999999999999999999887332 2334456778876
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.62 E-value=1.6e-05 Score=70.52 Aligned_cols=185 Identities=12% Similarity=0.064 Sum_probs=122.6
Q ss_pred cCCC--ceEEEEEcCCCCeEEEEeCC--CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 213 GHTS--EVCACAWSPAGSLLASGSGD--STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 213 ~H~~--~V~~~~~~p~~~~l~sgs~d--g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
.|.. -...+.|++ +.++.+.+.+ +.|+++|+.+++...... +.. ...--.++.. .+++
T Consensus 16 phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~-----------l~~-----~~fgeGi~~~-~~~l 77 (243)
T 3mbr_X 16 PHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAE-----------VPP-----PYFGAGIVAW-RDRL 77 (243)
T ss_dssp ECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEE-----------CCT-----TCCEEEEEEE-TTEE
T ss_pred CCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEe-----------CCC-----CcceeEEEEe-CCEE
Confidence 4543 356899986 5666666664 489999999987532111 000 0111223332 2334
Q ss_pred EEEEECCCeEEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeecc-----CCeEE
Q 010754 289 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-----GPTLD 362 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-----~~v~~ 362 (502)
....-.++.+.+||... +.+.++... ..=+.++ +++..|+.+..++.|.++|..+.+.+.++.... ..+..
T Consensus 78 y~ltw~~~~v~v~D~~tl~~~~ti~~~-~~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNe 154 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATLTPRARFRYP-GEGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNE 154 (243)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEECS-SCCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred EEEEeeCCEEEEEECCcCcEEEEEeCC-CCceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccccccee
Confidence 44445679999999875 444454432 2224555 456777777778999999999999888876543 34667
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecC-------------CCcEEEEEEcCCCCEEEEEeC
Q 010754 363 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH-------------QGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 363 v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-------------~~~i~~l~~sp~g~~las~s~ 418 (502)
+.|..+..++....+..|.+.|..+++.+..+.-. ..-.++|+|+|+++.|...+.
T Consensus 155 Le~~~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 155 LEWVNGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred eEEeCCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 88887766666667889999999999998887622 135789999998776665554
No 246
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.62 E-value=8.4e-06 Score=72.87 Aligned_cols=178 Identities=11% Similarity=0.063 Sum_probs=121.8
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCe
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 297 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~ 297 (502)
...+.|+ ++.++.+.+.+|.|+++|+.+++..... +.. ....-.+++.. +++.++.-.++.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~------------l~~-----~~FgeGit~~g-~~Ly~ltw~~~~ 117 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME------------RLG-----NIFAEGLASDG-ERLYQLTWTEGL 117 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE------------ECT-----TCCEEEEEECS-SCEEEEESSSCE
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE------------CCC-----CcceeEEEEeC-CEEEEEEccCCE
Confidence 4688887 4677788888899999999998754311 100 11123344432 244444456799
Q ss_pred EEEEECCC-ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccC-----CeEEEEecCCCEE
Q 010754 298 ARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-----PTLDVDWRNNVSF 371 (502)
Q Consensus 298 i~iwd~~~-~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~-----~v~~v~~~~~~~~ 371 (502)
+.+||... +.+.++... ..-+.++ +++..|+.+..++.|.++|..+.+.+.++..... .+..+.|..+..+
T Consensus 118 v~V~D~~Tl~~~~ti~~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~dG~ly 194 (268)
T 3nok_A 118 LFTWSGMPPQRERTTRYS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECANGVIY 194 (268)
T ss_dssp EEEEETTTTEEEEEEECS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETTEEE
T ss_pred EEEEECCcCcEEEEEeCC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEeCCEEE
Confidence 99999875 444455432 2224555 4678888877899999999999998888765332 4567888866656
Q ss_pred EEEeCCCeEEEEEcCCCcceEEEecC-------------CCcEEEEEEcCCCCEEEEEe
Q 010754 372 ATSSTDNMIYVCKIGENRPIKTFAGH-------------QGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 372 ~~~~~d~~i~i~d~~~~~~~~~~~~h-------------~~~i~~l~~sp~g~~las~s 417 (502)
+....++.|.+.|..+++.+..+... ..-.+.|+|+|+++.|+..+
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 65557889999999999988887632 13578999999765554444
No 247
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.60 E-value=2.2e-05 Score=75.77 Aligned_cols=216 Identities=14% Similarity=0.083 Sum_probs=134.2
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC-
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN- 304 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~- 304 (502)
++..++.++.++.|..+|..+++...... ... ......+ . .+..+++++.++.|..+|..
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~-----------~~~--~~~~~p~----~--~~~~v~v~~~~g~l~~~d~~t 162 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTK-----------VAG--EALSRPV----V--SDGLVLIHTSNGQLQALNEAD 162 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEE-----------CSS--CCCSCCE----E--ETTEEEEECTTSEEEEEETTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEe-----------CCC--ceEcCCE----E--ECCEEEEEcCCCeEEEEECCC
Confidence 45678888899999999998886421110 000 0011111 1 14578888899999999975
Q ss_pred CceEEEecCccCCe-----EEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCC-------eEEEEe---cCCC
Q 010754 305 GDLKCTLSKHKGPI-----FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-------TLDVDW---RNNV 369 (502)
Q Consensus 305 ~~~~~~~~~~~~~v-----~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~-------v~~v~~---~~~~ 369 (502)
+..+.......... ...... +..+++++.++.|..+|..+++.+..+...... +..+.. ..++
T Consensus 163 G~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 240 (376)
T 3q7m_A 163 GAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNG 240 (376)
T ss_dssp CCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETT
T ss_pred CcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECC
Confidence 55555443322111 112222 457888888999999999999988776533210 000111 1256
Q ss_pred EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc-CCCcEEEEEE
Q 010754 370 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-HSKEIYTIRW 448 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~-h~~~i~~v~~ 448 (502)
.+++++.++.+..+|..+++.+..... .....+... +..|..++.+|.|..+|..+++.+..... ....+.....
T Consensus 241 ~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~~--~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~ 316 (376)
T 3q7m_A 241 VVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIVD--GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL 316 (376)
T ss_dssp EEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEEE--TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE
T ss_pred EEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceEE--CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE
Confidence 778888899999999999988766542 334455443 66788888899999999999998776652 1111222222
Q ss_pred ccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 449 SPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
. +..+++++.++.+.+++
T Consensus 317 ~---------~~~l~v~~~~g~l~~~d 334 (376)
T 3q7m_A 317 Y---------NGNLVVGDSEGYLHWIN 334 (376)
T ss_dssp E---------TTEEEEECTTSEEEEEE
T ss_pred E---------CCEEEEEeCCCeEEEEE
Confidence 1 12567777777776665
No 248
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.60 E-value=9.1e-05 Score=79.10 Aligned_cols=220 Identities=7% Similarity=0.005 Sum_probs=146.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.++...++|. |..|+.++-|..|+..+.... ..........-....|.++...++|++. .|+.+
T Consensus 310 ~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~-----------~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~ 376 (795)
T 4a2l_A 310 RSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFK-----------NIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTND 376 (795)
T ss_dssp SCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSE-----------EECCCTTSSSCSCSSEEEEEECTTSCEE-EEESS
T ss_pred CcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccce-----------EEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECC
Confidence 5799999998887 455666677888886544321 0000000011123569999999888755 57777
Q ss_pred CeEEEEECCCceEEEecC---------ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe----eccCCeEE
Q 010754 296 GQARIWSTNGDLKCTLSK---------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE----FHSGPTLD 362 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~---------~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~----~~~~~v~~ 362 (502)
+-|..|+........+.. ....|.++...++++.|..|+.++-|.+||..+++...... .....|.+
T Consensus 377 ~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~ 456 (795)
T 4a2l_A 377 GGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYA 456 (795)
T ss_dssp SCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEE
T ss_pred CCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEE
Confidence 789999977554443321 23578999998888867778888889999988876443221 12356888
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCCcceEEEe------cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 363 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 363 v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~------~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
+...+++.+..|+. +.+.+|+..+++...... .....|.++..+++|++.+... . -|..||..+++. .+
T Consensus 457 i~~d~~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~-Gl~~~~~~~~~~--~~ 531 (795)
T 4a2l_A 457 ILPDGEGNLWLGTL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E-GLSVFKQEGLDI--QK 531 (795)
T ss_dssp EEECSSSCEEEEES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S-CEEEEEEETTEE--EE
T ss_pred EEECCCCCEEEEec-CceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C-ceEEEeCCCCeE--EE
Confidence 88877777777777 568889987764322111 1235799999999998776554 4 588999877765 22
Q ss_pred c-------cCCCcEEEEEEccCCC
Q 010754 437 R-------EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 437 ~-------~h~~~i~~v~~sp~g~ 453 (502)
. .....|.++...++|.
T Consensus 532 ~~~~~~~~l~~~~i~~i~~d~~g~ 555 (795)
T 4a2l_A 532 ASILPVSNVTKLFTNCIYEASNGI 555 (795)
T ss_dssp CCCSCSCGGGGSCEEEEEECTTSC
T ss_pred ecCCCCCCCCCCeeEEEEECCCCC
Confidence 2 2334688999888886
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.60 E-value=5.8e-07 Score=89.75 Aligned_cols=210 Identities=10% Similarity=0.037 Sum_probs=135.0
Q ss_pred CCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE-C-CCCCEEEEEE---------
Q 010754 226 AGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-N-GEGTLLATGS--------- 293 (502)
Q Consensus 226 ~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-s-~~g~~l~s~~--------- 293 (502)
||++|+.... +..|.+.|+.+.++.. .+ ..+.......+++ + |+++++++++
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~-------------ii---~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~d 163 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDA-------------IL---EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVND 163 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEE-------------EE---ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCS
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEee-------------EE---eCCCCCCCcceeeeecCCCcEEEEecccccccCCC
Confidence 6776666654 5679999999876422 01 0111245778887 5 8999998885
Q ss_pred ---------CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC---------------------------
Q 010754 294 ---------YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--------------------------- 337 (502)
Q Consensus 294 ---------~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~--------------------------- 337 (502)
+++.+.+.|.....+.....-.+....++++|+|+++++++.+.
T Consensus 164 g~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~ 243 (595)
T 1fwx_A 164 GTNMEDVANYVNVFTAVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEK 243 (595)
T ss_dssp SSSTTCGGGEEEEEEEEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHH
T ss_pred CcccccccccCceEEEEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeE
Confidence 24578999987644332221212346678999999999888653
Q ss_pred -----------eEEEEEcCC--Cce-EEEEeeccCCeEEEEecCCCE--EEEEeCCCeEEEEEcCCCc------------
Q 010754 338 -----------TAIVWDVKT--EEW-KQQFEFHSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGENR------------ 389 (502)
Q Consensus 338 -----------~i~~wd~~~--~~~-~~~~~~~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~~~------------ 389 (502)
.|.+.|..+ ++. +..+.. .....++.++|++. ++++..+.+|.++|+.+.+
T Consensus 244 ~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~ 322 (595)
T 1fwx_A 244 AIAAGDYQELNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSA 322 (595)
T ss_dssp HHHHTCSEEETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGG
T ss_pred eccCCCeeEECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccc
Confidence 366667766 433 334432 22445677888776 4444568899999998653
Q ss_pred ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC----------CeeEEEeccCCCcE-----EEEEEccCCC
Q 010754 390 PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ----------DKYVHDLREHSKEI-----YTIRWSPTGS 453 (502)
Q Consensus 390 ~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~----------~~~~~~~~~h~~~i-----~~v~~sp~g~ 453 (502)
.+.... -......++|+|+|....+.-.|+.|.+||+.+ .+.+.++..|-.+- ..+..+|||.
T Consensus 323 v~~~v~-vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk 400 (595)
T 1fwx_A 323 VVAEPE-LGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND 400 (595)
T ss_dssp EEECCB-CCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS
T ss_pred eEEEcC-CCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC
Confidence 222222 234678999999994444556699999999977 56677777665432 1223467776
No 250
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.55 E-value=1.1e-05 Score=85.50 Aligned_cols=195 Identities=12% Similarity=0.084 Sum_probs=117.5
Q ss_pred cCCC-ceEEEEEc-CCCCeEEEEeC-CC----cEEEEecCCC-CccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC
Q 010754 213 GHTS-EVCACAWS-PAGSLLASGSG-DS----TARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 284 (502)
Q Consensus 213 ~H~~-~V~~~~~~-p~~~~l~sgs~-dg----~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~ 284 (502)
+|.- .+...+|| |||++||.+.. +| +|+++|+.++ +... . . +. .....++|+|
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~---~-~-----~~----------~~~~~~~Wsp 230 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA---D-K-----VS----------GTNGEIVWGP 230 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC---C-C-----EE----------EECSCCEECS
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC---c-c-----cc----------CceeeEEEec
Confidence 4443 67889999 99998885543 22 4999999887 5211 0 0 00 0134678999
Q ss_pred CCCEEEEEECC-----CeEEEEECCCce---EEEec-CccCCeEEEEEecCCCEEEEEec---CCeEEEEEcCCC--ce-
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDL---KCTLS-KHKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTE--EW- 349 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~---~~~~~-~~~~~v~~l~~~~~~~~l~s~~~---d~~i~~wd~~~~--~~- 349 (502)
||+.|+....+ ..|.++++.+.. ...+. ........+.|+|+|++|+..+. ...|.++|+.++ ..
T Consensus 231 Dg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~ 310 (751)
T 2xe4_A 231 DHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNT 310 (751)
T ss_dssp STTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCC
T ss_pred CCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCce
Confidence 99988877765 257777876531 22222 22334678899999998886653 346888998875 22
Q ss_pred EEEE-eeccCCeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcceEE-EecCCC--cEEEEEEcCCCCEEEEEeCCC
Q 010754 350 KQQF-EFHSGPTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIKT-FAGHQG--EVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 350 ~~~~-~~~~~~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~~-~~~h~~--~i~~l~~sp~g~~las~s~dg 420 (502)
+..+ .........+.|..+..|+..+.. ..|..+++.+...... +..+.. .+..+.+. .+.++++...+|
T Consensus 311 ~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g 389 (751)
T 2xe4_A 311 LEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAG 389 (751)
T ss_dssp EEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETT
T ss_pred eEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCC
Confidence 0222 233455677776666666555433 3677788765322222 333433 35556655 334556667777
Q ss_pred c--EEEEEC
Q 010754 421 T--AKIWNM 427 (502)
Q Consensus 421 ~--i~iwd~ 427 (502)
. |.++++
T Consensus 390 ~~~l~~~dl 398 (751)
T 2xe4_A 390 LTRIWTMMA 398 (751)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEec
Confidence 6 455564
No 251
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.52 E-value=0.00027 Score=75.40 Aligned_cols=220 Identities=11% Similarity=0.078 Sum_probs=145.3
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeec-Ccc-ccCCCCeEEEEECCCCCEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRT-NEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
...|.++...++|. |..|+.++-|..|+..++.... ..... ... .-....|.++...++|+.|..|
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWig 423 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTS-----------YTLQEDESARGIGSNNIKAVYVDEKKSLVYIG 423 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEE-----------ECCC------CCSCSCEEEEEEETTTTEEEEE
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEE-----------EecCCCCcccCCCCccEEEEEEcCCCCEEEEE
Confidence 35699999988887 4457777779999877654211 00000 000 0123569999998898866778
Q ss_pred ECCCeEEEEECCCceEEEecC-----ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee------ccCCeE
Q 010754 293 SYDGQARIWSTNGDLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF------HSGPTL 361 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~------~~~~v~ 361 (502)
+.++-|.+|+..+.....+.. ....|.++...++|...+. +. +.+.+||..+++....... ....|.
T Consensus 424 t~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 501 (795)
T 4a2l_A 424 THAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLG-TL-SALVRFNPEQRSFTTIEKEKDGTPVVSKQIT 501 (795)
T ss_dssp ETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEE-ES-SCEEEEETTTTEEEECCBCTTCCBCCCCCEE
T ss_pred eCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEE-ec-CceeEEeCCCCeEEEccccccccccCCceEE
Confidence 887889999987655554432 3457899998888875554 44 5688999887754432211 234688
Q ss_pred EEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEe-------cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEE
Q 010754 362 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 434 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~-------~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~ 434 (502)
++...+++.+..|+. +.+..|+..++.. .+. .....|.+|..+++|.+.++.. . -|..||..+++...
T Consensus 502 ~i~~d~~g~lWigt~-~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~~~~~~~~ 576 (795)
T 4a2l_A 502 TLFRDSHKRLWIGGE-EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNEKDKQIKR 576 (795)
T ss_dssp EEEECTTCCEEEEES-SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEETTTTEEEE
T ss_pred EEEECCCCCEEEEeC-CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECCCCCcEEE
Confidence 888877777777777 6688899877654 332 1235799999999998766544 3 48899987776543
Q ss_pred Eec--c-CCCcEEEEEEccCCC
Q 010754 435 DLR--E-HSKEIYTIRWSPTGS 453 (502)
Q Consensus 435 ~~~--~-h~~~i~~v~~sp~g~ 453 (502)
--. + ....|.++...++|.
T Consensus 577 ~~~~~gl~~~~i~~i~~d~~g~ 598 (795)
T 4a2l_A 577 YNTTNGLPNNVVYGILEDSFGR 598 (795)
T ss_dssp ECGGGTCSCSCEEEEEECTTSC
T ss_pred eCCCCCCchhheEEEEECCCCC
Confidence 211 1 134588888888886
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.41 E-value=0.00028 Score=64.26 Aligned_cols=171 Identities=12% Similarity=0.018 Sum_probs=108.7
Q ss_pred CeEEEEECCCCCEEEEEE-CCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCCCceEEE
Q 010754 276 DVTTLDWNGEGTLLATGS-YDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~-~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~~~~~~~ 352 (502)
.+..++|++++..|+.+. .++.|.+++.++.....+. ........+++++++..|+.+ ...+.|.++++........
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~ 116 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVL 116 (267)
T ss_dssp EEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEE
T ss_pred cEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEE
Confidence 478999999766666555 5689999998876443332 222467899999976655554 4567999999865433222
Q ss_pred EeeccCCeEEEEecC-CCEEEEEeC---CCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCCCCEEEE-EeCCCcEEEEE
Q 010754 353 FEFHSGPTLDVDWRN-NVSFATSST---DNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLAS-CSDDVTAKIWN 426 (502)
Q Consensus 353 ~~~~~~~v~~v~~~~-~~~~~~~~~---d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~g~~las-~s~dg~i~iwd 426 (502)
..........+++.+ ++.+..+.. .+.|..+++.... ...+. ........++++|++..|.. -...+.|.++|
T Consensus 117 ~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~ 195 (267)
T 1npe_A 117 FDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLN 195 (267)
T ss_dssp ECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEe
Confidence 222224578888877 566555543 3688888876433 23332 23356889999998766554 44568999999
Q ss_pred CCCCeeEEEeccCCCcEEEEEE
Q 010754 427 MKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 427 ~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
.........+... .....++.
T Consensus 196 ~~g~~~~~~~~~~-~~P~gi~~ 216 (267)
T 1npe_A 196 PAQPGRRKVLEGL-QYPFAVTS 216 (267)
T ss_dssp TTEEEEEEEEECC-CSEEEEEE
T ss_pred cCCCceEEEecCC-CCceEEEE
Confidence 8765443333322 22345554
No 253
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=6.2e-05 Score=70.84 Aligned_cols=175 Identities=9% Similarity=0.004 Sum_probs=111.4
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecC--------------------ccCCeEEEEEecCCCEEEEEec
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK--------------------HKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~--------------------~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
...+++|+++|++++++..++.|..|+..+.....+.. ....+.++++.++...|+++..
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~ 99 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC 99 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC
Confidence 35678899999988888899999999987654433321 1235789999983345666666
Q ss_pred CCeEEEEEcCCCceEEEEee-----ccCCeEEEEecC-CCEEEEEeC------------------CCeEEEEEcCCCcce
Q 010754 336 DKTAIVWDVKTEEWKQQFEF-----HSGPTLDVDWRN-NVSFATSST------------------DNMIYVCKIGENRPI 391 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~-----~~~~v~~v~~~~-~~~~~~~~~------------------d~~i~i~d~~~~~~~ 391 (502)
.+.|..+|..++.. ..+.. ......++.+.+ ++.+..+.. ++.|..||..+++..
T Consensus 100 ~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~ 178 (322)
T 2fp8_A 100 YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETT 178 (322)
T ss_dssp TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEE
T ss_pred CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEE
Confidence 66688898765543 22221 112467788877 666555443 367888887766533
Q ss_pred EEEecCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCe--eEEEeccCCCcEEEEEEccCCC
Q 010754 392 KTFAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDK--YVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 392 ~~~~~h~~~i~~l~~sp~g~~las~-s~dg~i~iwd~~~~~--~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.... .....+.|+|+|+|++|..+ +..+.|.+|++.... ....+....+ ...+++.++|.
T Consensus 179 ~~~~-~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~ 241 (322)
T 2fp8_A 179 LLLK-ELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGH 241 (322)
T ss_dssp EEEE-EESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSC
T ss_pred Eecc-CCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCC
Confidence 2222 22345679999999866555 556889999987421 1111111122 67788888886
No 254
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.39 E-value=5.3e-05 Score=75.74 Aligned_cols=183 Identities=11% Similarity=0.046 Sum_probs=121.1
Q ss_pred CCCEEEEEECC-CeEEEEECCCce-EEEec-CccCCeEEEEE-e-cCCCEEEEEe------------------cCCeEEE
Q 010754 285 EGTLLATGSYD-GQARIWSTNGDL-KCTLS-KHKGPIFSLKW-N-KKGDYLLTGS------------------CDKTAIV 341 (502)
Q Consensus 285 ~g~~l~s~~~d-g~i~iwd~~~~~-~~~~~-~~~~~v~~l~~-~-~~~~~l~s~~------------------~d~~i~~ 341 (502)
||++++++..+ +.|.+.|+.... ...+. .....+..+++ + |++.++++++ .++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 88888887754 679999988744 33221 22345788887 5 8999999885 3468999
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecCCCE-EEEEeCC--------------------------------------CeEEE
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSSTD--------------------------------------NMIYV 382 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~-~~~~~~d--------------------------------------~~i~i 382 (502)
+|..+.+...++.... ....+..++++. +++++.+ +.|.+
T Consensus 180 ID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSG-NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EETTTTEEEEEEEESS-CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EECCCCeEEEEEEeCC-CccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 9999998888876533 223344444332 2222211 23677
Q ss_pred EEcCC--Ccc-eEEEecCCCcEEEEEEcCCCCEEEEEeC-CCcEEEEECCCCe------------eEEEeccCCCcEEEE
Q 010754 383 CKIGE--NRP-IKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDK------------YVHDLREHSKEIYTI 446 (502)
Q Consensus 383 ~d~~~--~~~-~~~~~~h~~~i~~l~~sp~g~~las~s~-dg~i~iwd~~~~~------------~~~~~~~h~~~i~~v 446 (502)
.|..+ ++. +..+.. .....++.++|||++++.++. +.+|.++|+.+.+ .+..+. -......+
T Consensus 259 ID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~ 336 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHT 336 (595)
T ss_dssp EECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEE
T ss_pred EeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC-CCCCcceE
Confidence 77776 444 444442 234567999999998877664 7899999998653 344443 33457899
Q ss_pred EEccCCCCCCCCCccEEEEeecCceEEEEee
Q 010754 447 RWSPTGSGTNNPNQQLILARLIPYFLYWICS 477 (502)
Q Consensus 447 ~~sp~g~~~~~~~~~l~las~~~~~~iw~~~ 477 (502)
+|+|+|. ..++.-.++.+.+|+..
T Consensus 337 aF~~dG~-------aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 337 AFDGRGN-------AYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp EECTTSE-------EEEEETTTTEEEEEEHH
T ss_pred EECCCCe-------EEEEEecCCcEEEEEhh
Confidence 9999985 34455567888888754
No 255
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.37 E-value=0.00055 Score=61.44 Aligned_cols=179 Identities=12% Similarity=0.187 Sum_probs=115.9
Q ss_pred CCCeEEEEECCCCCE-EEEEECCCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce--
Q 010754 274 SKDVTTLDWNGEGTL-LATGSYDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-- 349 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~-l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~-- 349 (502)
...+..++|+|++.. +++...++.|...|..+.....+.- -....-.|++.+++.++++.-.++.+.++++.....
T Consensus 26 ~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~ 105 (255)
T 3qqz_A 26 TNNISSLTWSAQSNTLFSTINKPAAIVEMTTNGDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVK 105 (255)
T ss_dssp CSCEEEEEEETTTTEEEEEEETTEEEEEEETTCCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ccCcceeEEeCCCCEEEEEECCCCeEEEEeCCCCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeee
Confidence 457999999997664 4557778899999998877766532 235678899998887777766778999998865442
Q ss_pred -EEEEee------ccCCeEEEEecCCC-EEEEEeCCCeEEEEEcC---CCcceEEEe-------cCCCcEEEEEEcCCCC
Q 010754 350 -KQQFEF------HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIG---ENRPIKTFA-------GHQGEVNCVKWDPTGS 411 (502)
Q Consensus 350 -~~~~~~------~~~~v~~v~~~~~~-~~~~~~~d~~i~i~d~~---~~~~~~~~~-------~h~~~i~~l~~sp~g~ 411 (502)
+..... .....-.++|.+.. .|+++.......+|.+. ....+..+. .+...+.+++++|...
T Consensus 106 ~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg 185 (255)
T 3qqz_A 106 ILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKN 185 (255)
T ss_dssp EEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTT
T ss_pred eeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCC
Confidence 222321 12235789997654 55555544444444443 111222221 1234578999999654
Q ss_pred -EEEEEeCCCcEEEEECCCCeeEEEeccCC---------CcEEEEEEccCCC
Q 010754 412 -LLASCSDDVTAKIWNMKQDKYVHDLREHS---------KEIYTIRWSPTGS 453 (502)
Q Consensus 412 -~las~s~dg~i~iwd~~~~~~~~~~~~h~---------~~i~~v~~sp~g~ 453 (502)
+++.......|.++|.. ++.+..+.-.. ..-..|+|.|+|.
T Consensus 186 ~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~ 236 (255)
T 3qqz_A 186 TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN 236 (255)
T ss_dssp EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC
T ss_pred eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC
Confidence 55556667889999965 55655544221 2578999999997
No 256
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.37 E-value=4.2e-05 Score=73.83 Aligned_cols=184 Identities=13% Similarity=0.079 Sum_probs=119.3
Q ss_pred CCCCEEEEEE-CCCeEEEEECCC-----ceEEEec------C-ccCCeEEEEEecCCCEEEEEecC------CeEEEEEc
Q 010754 284 GEGTLLATGS-YDGQARIWSTNG-----DLKCTLS------K-HKGPIFSLKWNKKGDYLLTGSCD------KTAIVWDV 344 (502)
Q Consensus 284 ~~g~~l~s~~-~dg~i~iwd~~~-----~~~~~~~------~-~~~~v~~l~~~~~~~~l~s~~~d------~~i~~wd~ 344 (502)
+++++|++.+ .++.|.++|+.. +...++. . ....-..+...|+| .++++..+ +.|.++|.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEEC
Confidence 7777776654 668999999753 2333331 0 11134567778999 77766655 78999999
Q ss_pred CCCceEEEEeeccCC---eEEEEecCCCEEEEEeC--------------------CCeEEEEEcCCCcceEEEecC-C-C
Q 010754 345 KTEEWKQQFEFHSGP---TLDVDWRNNVSFATSST--------------------DNMIYVCKIGENRPIKTFAGH-Q-G 399 (502)
Q Consensus 345 ~~~~~~~~~~~~~~~---v~~v~~~~~~~~~~~~~--------------------d~~i~i~d~~~~~~~~~~~~h-~-~ 399 (502)
.+++.+.++.....+ -.++-|+++..++..+. +.+|.+||+.+++.+.++..- . .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 999999888643222 34567777665444442 789999999998888887643 1 2
Q ss_pred cEEEEEE--cCCCCEEEEEe------CCCcEEEEECCCCee--EEEe--ccC----------------CCcEEEEEEccC
Q 010754 400 EVNCVKW--DPTGSLLASCS------DDVTAKIWNMKQDKY--VHDL--REH----------------SKEIYTIRWSPT 451 (502)
Q Consensus 400 ~i~~l~~--sp~g~~las~s------~dg~i~iwd~~~~~~--~~~~--~~h----------------~~~i~~v~~sp~ 451 (502)
....|.| +|+++++..++ .+++|.+|....++. ...+ ... ......|.+|||
T Consensus 252 ~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~D 331 (462)
T 2ece_A 252 MALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLD 331 (462)
T ss_dssp EEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTT
T ss_pred ccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCC
Confidence 4456666 99999887776 456888776554432 1111 110 134688999999
Q ss_pred CCCCCCCCccEEEEeec-CceEEEE
Q 010754 452 GSGTNNPNQQLILARLI-PYFLYWI 475 (502)
Q Consensus 452 g~~~~~~~~~l~las~~-~~~~iw~ 475 (502)
|+ .|+++... +.+.++.
T Consensus 332 Gr-------fLYVSnrg~d~Vavfd 349 (462)
T 2ece_A 332 DK-------FLYLSLWGIGEVRQYD 349 (462)
T ss_dssp SC-------EEEEEETTTTEEEEEE
T ss_pred CC-------EEEEEeCCCCEEEEEE
Confidence 98 54544443 4455544
No 257
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.36 E-value=0.00018 Score=69.52 Aligned_cols=221 Identities=8% Similarity=-0.073 Sum_probs=136.3
Q ss_pred CCCceEEEEEcCCC-CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE-E
Q 010754 214 HTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-T 291 (502)
Q Consensus 214 H~~~V~~~~~~p~~-~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~-s 291 (502)
....+..++|++.+ .++++-...+.|..+++...... . +.. ........+++.+.+..|+ +
T Consensus 114 ~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-----------~---~~~---~~~~~p~glavd~~~g~lY~~ 176 (386)
T 3v65_B 114 NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-----------E---VVS---TGLESPGGLAVDWVHDKLYWT 176 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEE-----------E---EEC---SSCSCCCCEEEETTTTEEEEE
T ss_pred CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcE-----------E---EEe---CCCCCccEEEEEeCCCeEEEE
Confidence 34557899999865 45555556788888887754310 0 000 0112346778887555554 4
Q ss_pred EECCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEec-C-CeEEEEEcCCCceEEEEeeccCCeEEEEecC-
Q 010754 292 GSYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC-D-KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN- 367 (502)
Q Consensus 292 ~~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~-d-~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~- 367 (502)
-...+.|.+.++++.....+. ..-.....++++|.+..|+.+.. . +.|..+++..................+++.+
T Consensus 177 d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 177 DSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 256 (386)
T ss_dssp ETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGG
T ss_pred cCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCC
Confidence 445678999998876544333 33356789999997766665544 3 6888888765433333333334467888863
Q ss_pred CC-EEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEE
Q 010754 368 NV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 446 (502)
Q Consensus 368 ~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v 446 (502)
++ .+++-...+.|..+++........+........+|++. .+.++++-...+.|..++..+++.+..+.........|
T Consensus 257 ~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi 335 (386)
T 3v65_B 257 GRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDI 335 (386)
T ss_dssp GTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCE
T ss_pred CCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEEE-CCEEEEeeCCCCeEEEEECCCCcceEEEccCCCCCceE
Confidence 34 45555667889999987544433344344567788883 55566666678889999977777766665433344555
Q ss_pred EE-ccCC
Q 010754 447 RW-SPTG 452 (502)
Q Consensus 447 ~~-sp~g 452 (502)
++ +|..
T Consensus 336 ~v~~~~~ 342 (386)
T 3v65_B 336 HTLHPQR 342 (386)
T ss_dssp EEESGGG
T ss_pred EEEchhc
Confidence 54 4443
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.33 E-value=0.00035 Score=66.47 Aligned_cols=220 Identities=8% Similarity=-0.063 Sum_probs=134.6
Q ss_pred CCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE-EEE
Q 010754 215 TSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~s~ 292 (502)
...+..++|++.+. ++++-...+.|..+++...... .+ .. ........+++.+.+..| ++-
T Consensus 72 ~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~-----------~~--~~----~~~~~p~glavd~~~g~ly~~d 134 (349)
T 3v64_C 72 LENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE-----------EV--VS----TGLESPGGLAVDWVHDKLYWTD 134 (349)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EE--EC----SSCSCCCEEEEETTTTEEEEEE
T ss_pred CCceEEEEEeccccEEEEEeccCCceEEEecCCCCce-----------EE--Ee----CCCCCccEEEEecCCCeEEEEc
Confidence 34578999998654 4555556788888887754311 00 00 011235678888755555 444
Q ss_pred ECCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEec-C-CeEEEEEcCCCceEEEEeeccCCeEEEEecC-C
Q 010754 293 SYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC-D-KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 368 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~-d-~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~ 368 (502)
...+.|.+.+.++.....+. ..-.....++++|.+..|+.+.. . +.|..+++..................+++.+ +
T Consensus 135 ~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~ 214 (349)
T 3v64_C 135 SGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAG 214 (349)
T ss_dssp TTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTT
T ss_pred CCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCC
Confidence 55689999998876544433 33355689999996666555443 4 7888888764432222222233567888864 4
Q ss_pred CE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEE
Q 010754 369 VS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 447 (502)
Q Consensus 369 ~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~ 447 (502)
+. +++-...+.|..+++........+........+|++. .+.++++-...+.|..++..+++.+..+.........|+
T Consensus 215 ~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~~~~~~p~gi~ 293 (349)
T 3v64_C 215 RRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIRNKLHFPMDIH 293 (349)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEECSCSCCCCEE
T ss_pred CEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEeccCCCCCceEE
Confidence 44 4555567889999987544333343344567788884 555666666778899998777776666653333344554
Q ss_pred -EccCC
Q 010754 448 -WSPTG 452 (502)
Q Consensus 448 -~sp~g 452 (502)
++|..
T Consensus 294 v~~~~~ 299 (349)
T 3v64_C 294 TLHPQR 299 (349)
T ss_dssp EECGGG
T ss_pred EEcccc
Confidence 45543
No 259
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.30 E-value=3.8e-05 Score=80.02 Aligned_cols=228 Identities=11% Similarity=0.078 Sum_probs=138.6
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC------CCeEEE
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY------DGQARI 300 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~------dg~i~i 300 (502)
+..++.++.|+.|..+|..+++..-...... ..........++. .+..++++.. +|.|..
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~--------~~~~~~~~~~P~v------~~~~v~vg~~~~~~~~~g~v~a 182 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTD--------PAKPYSITGAPRV------VKGKVIIGNGGAEYGVRGFVSA 182 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSC--------TTSSCBCCSCCEE------ETTEEEECCBCTTTCCBCEEEE
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCC--------CCCcceecCCCEE------ECCEEEEeCCCCCcCCCCEEEE
Confidence 4578888889999999999987532111100 0000000011111 1334555542 589999
Q ss_pred EECC-CceEEEecCcc-------------------------------CCeEEEEEecCCCEEEEEecCC-----------
Q 010754 301 WSTN-GDLKCTLSKHK-------------------------------GPIFSLKWNKKGDYLLTGSCDK----------- 337 (502)
Q Consensus 301 wd~~-~~~~~~~~~~~-------------------------------~~v~~l~~~~~~~~l~s~~~d~----------- 337 (502)
+|.. ++.+..+.... .....++++|....++.++.++
T Consensus 183 ~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~ 262 (668)
T 1kv9_A 183 YDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPG 262 (668)
T ss_dssp EETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTT
T ss_pred EECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCC
Confidence 9975 56655553210 0112467888888888887766
Q ss_pred --------eEEEEEcCCCceEEEEeecc---------CCeEEEEecCCC----EEEEEeCCCeEEEEEcCCCcceEEEec
Q 010754 338 --------TAIVWDVKTEEWKQQFEFHS---------GPTLDVDWRNNV----SFATSSTDNMIYVCKIGENRPIKTFAG 396 (502)
Q Consensus 338 --------~i~~wd~~~~~~~~~~~~~~---------~~v~~v~~~~~~----~~~~~~~d~~i~i~d~~~~~~~~~~~~ 396 (502)
.|..+|..+|+.+..+.... .+........++ .++.++.+|.++++|..+++.+.....
T Consensus 263 ~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~ 342 (668)
T 1kv9_A 263 GGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKF 342 (668)
T ss_dssp CCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEES
T ss_pred CCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccc
Confidence 49999999999988887521 222222221122 478889999999999999988754432
Q ss_pred CC------------CcE------------------------EEEEEcCCCCEEEEE------------------------
Q 010754 397 HQ------------GEV------------------------NCVKWDPTGSLLASC------------------------ 416 (502)
Q Consensus 397 h~------------~~i------------------------~~l~~sp~g~~las~------------------------ 416 (502)
.. .++ ..++++|+..++...
T Consensus 343 ~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g 422 (668)
T 1kv9_A 343 GKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTA 422 (668)
T ss_dssp SCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCS
T ss_pred cccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccC
Confidence 11 000 126778876665542
Q ss_pred ------------eCCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 417 ------------SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 417 ------------s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..+|.|..||..+++.+..+..+. +.....+...|. .++.++.++.++.|+.
T Consensus 423 ~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg-------~vf~g~~dg~l~a~d~ 486 (668)
T 1kv9_A 423 AGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGN-------LVFQGTAAGQMHAYSA 486 (668)
T ss_dssp SCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTT-------EEEEECTTSEEEEEET
T ss_pred ccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCC-------EEEEECCcccchhhhh
Confidence 124789999999999887776332 333334444444 6777888888888863
No 260
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=0.0011 Score=70.56 Aligned_cols=225 Identities=11% Similarity=0.069 Sum_probs=142.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeee-cCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-KGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
...|.++...++|. |-.|+.++-|..|+..+..... ...... ..........|.++...++|.+. .|+
T Consensus 312 ~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt 380 (781)
T 3v9f_A 312 NASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHT---------WSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGT 380 (781)
T ss_dssp SSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEE---------EC----CCCSSCCSSSCEEEEEECTTSCEE-EEE
T ss_pred CCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCccee---------eccCccccccCCCCCcceEEEEEcCCCCEE-EEe
Confidence 45789999988886 5556666778888876543210 000000 00011123569999998888754 566
Q ss_pred CCCeEEEEECCCceEEEe----cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe--eccCCeEEEEecC
Q 010754 294 YDGQARIWSTNGDLKCTL----SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRN 367 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~----~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--~~~~~v~~v~~~~ 367 (502)
.++-|..|+........+ ......|.++...+++. |..|+.++.|..+|..+++...... .....|.++...+
T Consensus 381 ~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~ 459 (781)
T 3v9f_A 381 DGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN-LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDK 459 (781)
T ss_dssp BSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSC-EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECT
T ss_pred CCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCC-EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECC
Confidence 666788898765433322 12345689998887776 4556777789999987775433211 1235688888887
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcceEEEecC-----CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc---C
Q 010754 368 NVSFATSSTDNMIYVCKIGENRPIKTFAGH-----QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---H 439 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h-----~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~---h 439 (502)
++.+..++. +.|..|+..+++........ ...|.++...++|.+.+.....| |..||..+++...-... .
T Consensus 460 ~g~lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~l~ 537 (781)
T 3v9f_A 460 NKKIWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEGFC 537 (781)
T ss_dssp TSEEEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEECTTCCEEEEECTTTTCS
T ss_pred CCCEEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEeCCCCeEEEccCCCCCC
Confidence 888888877 67889998876544332222 35799999999998765544355 78899877654332111 2
Q ss_pred CCcEEEEEEccCCC
Q 010754 440 SKEIYTIRWSPTGS 453 (502)
Q Consensus 440 ~~~i~~v~~sp~g~ 453 (502)
...|.++...++|.
T Consensus 538 ~~~i~~i~~d~~g~ 551 (781)
T 3v9f_A 538 SNTINQIYRSSKGQ 551 (781)
T ss_dssp CSCEEEEEECTTSC
T ss_pred CCeeEEEEECCCCC
Confidence 34588888887775
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.28 E-value=0.00038 Score=74.12 Aligned_cols=217 Identities=12% Similarity=0.094 Sum_probs=140.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.++...++|.+ ..|+.++-|..|+..++.... ...........|.++...++|.+.+ |+.+
T Consensus 363 ~~v~~i~~d~~g~l-Wigt~~~Gl~~~~~~~~~~~~--------------~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~ 426 (781)
T 3v9f_A 363 KVVSSVCDDGQGKL-WIGTDGGGINVFENGKRVAIY--------------NKENRELLSNSVLCSLKDSEGNLWF-GTYL 426 (781)
T ss_dssp SCEEEEEECTTSCE-EEEEBSSCEEEEETTEEEEEC--------------C-----CCCSBEEEEEECTTSCEEE-EETT
T ss_pred cceEEEEEcCCCCE-EEEeCCCcEEEEECCCCeEEE--------------ccCCCCCCCcceEEEEECCCCCEEE-Eecc
Confidence 56899998887764 455655668888866432110 0000011235699999888887655 7776
Q ss_pred CeEEEEECCCceEEEecC---ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec-----cCCeEEEEecC
Q 010754 296 GQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH-----SGPTLDVDWRN 367 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~-----~~~v~~v~~~~ 367 (502)
+-|..++..+.....+.. ....|.++...+++. |..|+. +.|..||..+++........ ...|.++...+
T Consensus 427 ~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 504 (781)
T 3v9f_A 427 GNISYYNTRLKKFQIIELEKNELLDVRVFYEDKNKK-IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDS 504 (781)
T ss_dssp EEEEEECSSSCEEEECCSTTTCCCCEEEEEECTTSE-EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECT
T ss_pred CCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCCCC-EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcC
Confidence 778899877555444432 346789998887775 555555 67999998877654433222 35688888888
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcceEEEec----CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc----C
Q 010754 368 NVSFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE----H 439 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~~~~~~~~~----h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~----h 439 (502)
++.+..++.++-+..||..+++. ..+.. ....|.++..+++|.+.++.. +|.|..||..+++.. .+.. .
T Consensus 505 ~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~~-~~~~~~gl~ 581 (781)
T 3v9f_A 505 EGRFWIGTFGGGVGIYTPDMQLV-RKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDYQ-VFQRKEGLP 581 (781)
T ss_dssp TCCEEEEESSSCEEEECTTCCEE-EEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCCE-EECGGGTCS
T ss_pred CCCEEEEEcCCCEEEEeCCCCeE-EEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcEE-EccccCCCC
Confidence 88888888756678888766543 33321 135689999999998766544 675588998776543 2221 1
Q ss_pred CCcEEEEEEccCCC
Q 010754 440 SKEIYTIRWSPTGS 453 (502)
Q Consensus 440 ~~~i~~v~~sp~g~ 453 (502)
...|.++...++|.
T Consensus 582 ~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 582 NTHIRAISEDKNGN 595 (781)
T ss_dssp CCCCCEEEECSSSC
T ss_pred CceEEEEEECCCCC
Confidence 23477777777775
No 262
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.25 E-value=0.0011 Score=59.47 Aligned_cols=198 Identities=12% Similarity=0.133 Sum_probs=124.0
Q ss_pred EeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 210 ILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
.+.|-.+.+..++|+|++. ++++...++.|...|.. ++.. +.... ......-.|++.+++.+
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~-------------~~i~l---~g~~D~EGIa~~~~g~~ 83 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLI-------------RTIPL---DFVKDLETIEYIGDNQF 83 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEE-------------EEEEC---SSCSSEEEEEECSTTEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEE-------------EEEec---CCCCChHHeEEeCCCEE
Confidence 4455567899999999765 45556677888888876 4321 11110 11256888999998887
Q ss_pred EEEEECCCeEEEEECCCce----EEEec------CccCCeEEEEEecCCCEEEEEecCCeEEEEEcC---CCceEEEEee
Q 010754 289 LATGSYDGQARIWSTNGDL----KCTLS------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK---TEEWKQQFEF 355 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~----~~~~~------~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~---~~~~~~~~~~ 355 (502)
+++.-.++.+.++++.... ..... ..+.....|+|+|.++.|+++.......+|.+. ....+..+..
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~ 163 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKD 163 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEEC
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecc
Confidence 6765567888888865321 11111 234456899999999888877765555555543 1111222211
Q ss_pred -------ccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcceEEEecCC---------CcEEEEEEcCCCCEEEEEe
Q 010754 356 -------HSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 356 -------~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~---------~~i~~l~~sp~g~~las~s 417 (502)
....+..+.+.| +..++.+...+.+.++|.. ++++..+.-.. ...-.|+|+++|++.++ |
T Consensus 164 ~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-s 241 (255)
T 3qqz_A 164 KALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-S 241 (255)
T ss_dssp HHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-E
T ss_pred hhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-c
Confidence 122456777755 3467777888889999966 44555554221 25689999999986555 6
Q ss_pred CCCcEEEEE
Q 010754 418 DDVTAKIWN 426 (502)
Q Consensus 418 ~dg~i~iwd 426 (502)
+-+.++++.
T Consensus 242 E~n~~y~f~ 250 (255)
T 3qqz_A 242 EPNRFYRFT 250 (255)
T ss_dssp TTTEEEEEE
T ss_pred CCceEEEEE
Confidence 666666654
No 263
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.23 E-value=0.0019 Score=62.54 Aligned_cols=227 Identities=9% Similarity=-0.082 Sum_probs=137.2
Q ss_pred EeccCCCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE
Q 010754 210 ILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 288 (502)
Q Consensus 210 ~l~~H~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~ 288 (502)
.+......+..++|++.+. ++.+-...+.|..+++....... . ... .. .........+++.+.+..
T Consensus 106 ~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~-----~-~~~----~~---~~~~~~p~glavD~~~~~ 172 (400)
T 3p5b_L 106 SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----S-YDT----VI---SRDIQAPDGLAVDWIHSN 172 (400)
T ss_dssp EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------C-----C-CEE----EE---CSSCSCEEEEEEETTTTE
T ss_pred EeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCC-----c-ceE----EE---eCCCCCcccEEEEecCCc
Confidence 3334456788999998655 44454556788888876422000 0 000 00 011235788888885444
Q ss_pred EE-EEECCCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEE
Q 010754 289 LA-TGSYDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVD 364 (502)
Q Consensus 289 l~-s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~ 364 (502)
|+ +-...+.|.+.++++.....+.. .-.....|+++|.+.+|+.+.. .+.|...++........+...-.....|+
T Consensus 173 lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~~P~gla 252 (400)
T 3p5b_L 173 IYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGIT 252 (400)
T ss_dssp EEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECSSCSCEEEEE
T ss_pred eEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEECCCCceEEEE
Confidence 44 44566899999998765554432 3345789999997766665553 36888888865443333333334677888
Q ss_pred ecC-CCE-EEEEeCCCeEEEEEcCCCcceEEEec--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCC
Q 010754 365 WRN-NVS-FATSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 440 (502)
Q Consensus 365 ~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~--h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~ 440 (502)
+.+ ++. +++-...+.|..+|+........... .-....+|++. .+.++.+-...+.|..+|..+++.+..+....
T Consensus 253 vd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~ 331 (400)
T 3p5b_L 253 LDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAENL 331 (400)
T ss_dssp EETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECSC
T ss_pred EEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecCC
Confidence 863 444 44445678899999875543333332 23456678774 44556666677889999988887777766444
Q ss_pred CcEEEEE-Ecc
Q 010754 441 KEIYTIR-WSP 450 (502)
Q Consensus 441 ~~i~~v~-~sp 450 (502)
....+|+ ++|
T Consensus 332 ~~p~~i~v~~~ 342 (400)
T 3p5b_L 332 LSPEDMVLFHN 342 (400)
T ss_dssp SCEEEEEEESG
T ss_pred CCCceEEEEee
Confidence 4455654 444
No 264
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.23 E-value=4.4e-05 Score=79.54 Aligned_cols=220 Identities=15% Similarity=0.133 Sum_probs=124.5
Q ss_pred EEEEcC-CCCeEEEEeCCC-----------cEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 220 ACAWSP-AGSLLASGSGDS-----------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 220 ~~~~~p-~~~~l~sgs~dg-----------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
++++.| ++++++.|+.+. .+.+||..+++... + ..+. ..+.....++++..+|+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~------~--~~~~------~~~~~~~~~~~~~~~g~ 255 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD------R--TVTV------TKHDMFCPGISMDGNGQ 255 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC------C--EEEE------CSCCCSSCEEEECTTSC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe------C--cccC------CCCCCccccccCCCCCC
Confidence 556777 888999887643 57889988765321 0 0110 01122344567788999
Q ss_pred EEEEEEC-CCeEEEEECCCceEEEecCcc--CCeEEEEEecCCCEEEEEe-cC-----CeEEEEEcCCCceEEEEe----
Q 010754 288 LLATGSY-DGQARIWSTNGDLKCTLSKHK--GPIFSLKWNKKGDYLLTGS-CD-----KTAIVWDVKTEEWKQQFE---- 354 (502)
Q Consensus 288 ~l~s~~~-dg~i~iwd~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~s~~-~d-----~~i~~wd~~~~~~~~~~~---- 354 (502)
++++|+. ++.+.+||........+.... ..-.+++..++++.++.|+ .+ ..+.+||..+.++...-.
T Consensus 256 lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 256 IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence 9999985 468999997755444332211 1123455667889999888 34 579999998887654210
Q ss_pred -eccCCeEEEEecCCCEEEEEeCC---------CeEEEEEcCCCcceEEEecCC---------CcEEEEEEcC-CCCEEE
Q 010754 355 -FHSGPTLDVDWRNNVSFATSSTD---------NMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWDP-TGSLLA 414 (502)
Q Consensus 355 -~~~~~v~~v~~~~~~~~~~~~~d---------~~i~i~d~~~~~~~~~~~~h~---------~~i~~l~~sp-~g~~la 414 (502)
.....-..+....+..++.++.+ ..+..||..+.........+. ..-.++.|.. ++++++
T Consensus 336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 00000001111233345555444 456788887765333222111 1234455543 677888
Q ss_pred EEeCCC-----------cEEEEECCCCeeEEEe--ccCCCc-EEEEEEccCCC
Q 010754 415 SCSDDV-----------TAKIWNMKQDKYVHDL--REHSKE-IYTIRWSPTGS 453 (502)
Q Consensus 415 s~s~dg-----------~i~iwd~~~~~~~~~~--~~h~~~-i~~v~~sp~g~ 453 (502)
.|+.++ .|.+||..+....... ..+... -.+++..|+|.
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS 468 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC
Confidence 887532 6888888776654433 212222 23456677876
No 265
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.21 E-value=0.0019 Score=60.41 Aligned_cols=207 Identities=9% Similarity=-0.079 Sum_probs=126.5
Q ss_pred CCceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE-EE
Q 010754 215 TSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-TG 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~-s~ 292 (502)
...+..++|++.+. ++++-...+.|..+++...... . ....+ .. ........+++.+.+..|+ +-
T Consensus 29 ~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~-----~--~~~~~--~~----~~~~~p~glavd~~~~~ly~~d 95 (316)
T 1ijq_A 29 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV-----S--SYDTV--IS----RDIQAPDGLAVDWIHSNIYWTD 95 (316)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------CEEE--EC----SSCSCCCEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCC-----c--ccEEE--Ee----CCCCCcCEEEEeecCCeEEEEE
Confidence 45578999998654 5555556688999987652100 0 00000 00 1113457888887555554 44
Q ss_pred ECCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEecC--CeEEEEEcCCCceEEEE-eeccCCeEEEEecC-
Q 010754 293 SYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQF-EFHSGPTLDVDWRN- 367 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~d--~~i~~wd~~~~~~~~~~-~~~~~~v~~v~~~~- 367 (502)
...+.|.+++.++.....+. ..-.....++++|.+..|+.+... +.|..+++.. .....+ ...-.....+++.+
T Consensus 96 ~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~ 174 (316)
T 1ijq_A 96 SVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLL 174 (316)
T ss_dssp TTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECSSCSCEEEEEEETT
T ss_pred CCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEECCCCCceEEEEecc
Confidence 56789999999876544433 233466899999977666655543 6888888754 333333 22334567888874
Q ss_pred CCE-EEEEeCCCeEEEEEcCCCcceEEE-ec--CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 368 NVS-FATSSTDNMIYVCKIGENRPIKTF-AG--HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 368 ~~~-~~~~~~d~~i~i~d~~~~~~~~~~-~~--h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
++. +++-...+.|..+|+.... ...+ .. ......+|++. .+.++++-...+.|..++..+++.+..+.
T Consensus 175 ~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 175 SGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp TTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 444 4455567799999987533 3333 21 23456788886 45666666678899999987777666664
No 266
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.20 E-value=0.0014 Score=61.62 Aligned_cols=186 Identities=9% Similarity=0.074 Sum_probs=106.4
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEE-EECCCceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEe
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARI-WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~i-wd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~ 354 (502)
.+..+.+.+++..++++ .+|.|.. .|--..-..........+..+.+.+++.+++++...+..+-+|-........-.
T Consensus 123 ~~~~i~~~~~~~~~~~~-~~g~v~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~ 201 (327)
T 2xbg_A 123 SPRLIKALGNGSAEMIT-NVGAIYRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR 201 (327)
T ss_dssp CEEEEEEEETTEEEEEE-TTCCEEEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC
T ss_pred CeEEEEEECCCCEEEEe-CCccEEEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC
Confidence 46677777667666555 4564432 221112222233455678999999988877666444334444421112222222
Q ss_pred eccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEe-c---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 355 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-G---HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 355 ~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~-~---h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
.....+..+.+.+++.+++.+.+|.+++.+...++.-..+. . +...+.++.+.+++.+++++. +|.| ++..+.+
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 202 TTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp CSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT
T ss_pred CCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC
Confidence 34556788888777778888888888776432232211111 1 223588999999888777665 6666 4555545
Q ss_pred eeEEEec---cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceE
Q 010754 431 KYVHDLR---EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFL 472 (502)
Q Consensus 431 ~~~~~~~---~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~ 472 (502)
+.-..+. .....++++.|.+++ .+++++.++.+.
T Consensus 280 ~tW~~~~~~~~~~~~~~~v~~~~~~--------~~~~~G~~G~i~ 316 (327)
T 2xbg_A 280 QTWQQDVDVKKVPSNFYKILFFSPD--------QGFILGQKGILL 316 (327)
T ss_dssp SSCEECGGGTTSSSCCCEEEEEETT--------EEEEECSTTEEE
T ss_pred cccEEcCccCCCCCCeEEEEEECCC--------ceEEEcCCceEE
Confidence 4433333 234568899997654 356666666443
No 267
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.16 E-value=0.00031 Score=71.59 Aligned_cols=226 Identities=13% Similarity=0.066 Sum_probs=133.3
Q ss_pred CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC------CCeEEE
Q 010754 227 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY------DGQARI 300 (502)
Q Consensus 227 ~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~------dg~i~i 300 (502)
+..++.++.|+.+..+|..+++..-...... ..........++ + .+..+++++. +|.|..
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~--------~~~~~~~~~~P~--v----~~g~v~vg~~~~~~~~~g~v~a 180 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCD--------PKVGSTLTQAPF--V----AKDTVLMGCSGAELGVRGAVNA 180 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC--------GGGTCBCCSCCE--E----ETTEEEEECBCGGGTCCCEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCC--------CCccceeccCCE--E----ECCEEEEEecCCccCCCCEEEE
Confidence 5577888889999999999887432111000 000000001111 1 1335555554 789999
Q ss_pred EECC-CceEEEecCccCC-------------------------------------e-EEEEEecCCCEEEEEecC-----
Q 010754 301 WSTN-GDLKCTLSKHKGP-------------------------------------I-FSLKWNKKGDYLLTGSCD----- 336 (502)
Q Consensus 301 wd~~-~~~~~~~~~~~~~-------------------------------------v-~~l~~~~~~~~l~s~~~d----- 336 (502)
+|.. ++.+..+...... + ..+++.+....++.+..+
T Consensus 181 ~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~ 260 (571)
T 2ad6_A 181 FDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWN 260 (571)
T ss_dssp EETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSC
T ss_pred EECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCcccc
Confidence 9976 5555544321110 0 135667766677666532
Q ss_pred -----------CeEEEEEcCCCceEEEEeecc----------CCeEEEEecCCC----EEEEEeCCCeEEEEEcCCCcce
Q 010754 337 -----------KTAIVWDVKTEEWKQQFEFHS----------GPTLDVDWRNNV----SFATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 337 -----------~~i~~wd~~~~~~~~~~~~~~----------~~v~~v~~~~~~----~~~~~~~d~~i~i~d~~~~~~~ 391 (502)
+.|..+|..+|+.+..+.... .++. +....++ .++.++.+|.++++|..+++.+
T Consensus 261 ~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~ 339 (571)
T 2ad6_A 261 ETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI 339 (571)
T ss_dssp GGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE
T ss_pred CCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE
Confidence 369999999999988876421 2222 2211123 3667888999999999999887
Q ss_pred EEEecCC-------------CcE--------------------------EEEEEcCCCCEEEEEe---------------
Q 010754 392 KTFAGHQ-------------GEV--------------------------NCVKWDPTGSLLASCS--------------- 417 (502)
Q Consensus 392 ~~~~~h~-------------~~i--------------------------~~l~~sp~g~~las~s--------------- 417 (502)
..+.... .++ ..++++|+..+|+..+
T Consensus 340 w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~ 419 (571)
T 2ad6_A 340 VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYR 419 (571)
T ss_dssp EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCC
T ss_pred eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccc
Confidence 7664321 111 2357888877776653
Q ss_pred ----------------------CCCcEEEEECCCCeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 418 ----------------------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 418 ----------------------~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.+|.|..||..+++.+.++... .++.+......+ ..+++++.++.+..++
T Consensus 420 ~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~g-------g~v~~g~~dg~l~a~D 491 (571)
T 2ad6_A 420 AGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKG-------GLVWYATLDGYLKALD 491 (571)
T ss_dssp TTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETT-------TEEEEECTTSEEEEEE
T ss_pred cCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECC-------CEEEEEcCCCeEEEEE
Confidence 3578999999999888776522 222222222222 3677777778777775
No 268
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.12 E-value=0.0012 Score=61.45 Aligned_cols=175 Identities=13% Similarity=0.116 Sum_probs=106.0
Q ss_pred CCeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC--CeEEEEEcCCCceEEE
Q 010754 275 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQ 352 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d--~~i~~wd~~~~~~~~~ 352 (502)
.....++|+++|+++++-..++.|..||.++.....+. ....+..+++.++|+.+++.... ..|..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 35789999999997777667899999998876544332 23568899999999865554332 2477778778775443
Q ss_pred Eeec-cCCeEEEEecCCCEEE-EEeCCCeEEEEEcCCCcc-eEEEe---------cCCCcEEEEEEcCCCCEEEEE-eCC
Q 010754 353 FEFH-SGPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRP-IKTFA---------GHQGEVNCVKWDPTGSLLASC-SDD 419 (502)
Q Consensus 353 ~~~~-~~~v~~v~~~~~~~~~-~~~~d~~i~i~d~~~~~~-~~~~~---------~h~~~i~~l~~sp~g~~las~-s~d 419 (502)
.... ......++..++..++ +...++.|+++|...+.. +.... ..-...+.| +|++++|..+ +..
T Consensus 111 ~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~ 188 (306)
T 2p4o_A 111 LTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEK 188 (306)
T ss_dssp EECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTT
T ss_pred EeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCC
Confidence 3221 1223344433444444 444688999999875421 11111 111245566 7888766554 457
Q ss_pred CcEEEEECCC-Cee--EEEeccCCCcEEEEEEccCCC
Q 010754 420 VTAKIWNMKQ-DKY--VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 420 g~i~iwd~~~-~~~--~~~~~~h~~~i~~v~~sp~g~ 453 (502)
+.|..|++.. ++. ...+. .......+++.++|.
T Consensus 189 ~~I~~~~~~~~g~~~~~~~~~-~~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 189 MLLLRIPVDSTDKPGEPEIFV-EQTNIDDFAFDVEGN 224 (306)
T ss_dssp TEEEEEEBCTTSCBCCCEEEE-ESCCCSSEEEBTTCC
T ss_pred CEEEEEEeCCCCCCCccEEEe-ccCCCCCeEECCCCC
Confidence 8899999874 321 11111 012345677777775
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.12 E-value=0.00025 Score=73.87 Aligned_cols=175 Identities=11% Similarity=0.107 Sum_probs=111.9
Q ss_pred EEEEECCCCCEEEEEECCCe-------------------EEEEECC-CceEEEecC--cc-------CCeEEEEEecCCC
Q 010754 278 TTLDWNGEGTLLATGSYDGQ-------------------ARIWSTN-GDLKCTLSK--HK-------GPIFSLKWNKKGD 328 (502)
Q Consensus 278 ~~l~~s~~g~~l~s~~~dg~-------------------i~iwd~~-~~~~~~~~~--~~-------~~v~~l~~~~~~~ 328 (502)
..+++.+++.+++.++.++. |..+|.+ ++.+..+.. |. .++....+..+|+
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 35788888888888887763 8888965 455555543 22 2333333334664
Q ss_pred ---EEEEEecCCeEEEEEcCCCceEEEEeeccC------------CeE------------------------EEEecCC-
Q 010754 329 ---YLLTGSCDKTAIVWDVKTEEWKQQFEFHSG------------PTL------------------------DVDWRNN- 368 (502)
Q Consensus 329 ---~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~------------~v~------------------------~v~~~~~- 368 (502)
.++.++.+|.++++|..+|+.+........ ++. .+++.++
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~ 392 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT 392 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT
T ss_pred EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC
Confidence 688999999999999999998754432210 000 0233332
Q ss_pred CEEEEE------------------------------------eCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCE
Q 010754 369 VSFATS------------------------------------STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 369 ~~~~~~------------------------------------~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~ 412 (502)
+.+++. ..+|.|..||+.+++.+.++..+. ......+...+.+
T Consensus 393 g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~ 471 (668)
T 1kv9_A 393 GLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNL 471 (668)
T ss_dssp TEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTE
T ss_pred CEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCE
Confidence 222211 134789999999999887776433 3333344456788
Q ss_pred EEEEeCCCcEEEEECCCCeeEEEeccCCCc-EEEEEEccCCC
Q 010754 413 LASCSDDVTAKIWNMKQDKYVHDLREHSKE-IYTIRWSPTGS 453 (502)
Q Consensus 413 las~s~dg~i~iwd~~~~~~~~~~~~h~~~-i~~v~~sp~g~ 453 (502)
++.++.||.|++||.++++.+..+...... ..-+.+..+|.
T Consensus 472 vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~ 513 (668)
T 1kv9_A 472 VFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGR 513 (668)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred EEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCE
Confidence 999999999999999999999888744311 12234445554
No 270
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.11 E-value=0.0041 Score=59.02 Aligned_cols=213 Identities=12% Similarity=-0.024 Sum_probs=125.0
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-C
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-Y 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-~ 294 (502)
+...|.+..+++ +|+.+. ...|+..++...... . +. .....+..++|++.+..|+.+. .
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~-----------~---~~----~~~~~~~~l~~d~~~~~ly~~D~~ 93 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYT-----------L---LL----NNLENAIALDFHHRRELVFWSDVT 93 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEE-----------E---EE----CSCSCEEEEEEETTTTEEEEEETT
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeE-----------E---ee----cCCCceEEEEEeccccEEEEEecc
Confidence 334566666644 444333 355777776543210 0 10 1123588999998666665554 5
Q ss_pred CCeEEEEECCCceEEEe-cCccCCeEEEEEecCCCEE-EEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCE-
Q 010754 295 DGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVS- 370 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~l-~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~- 370 (502)
.+.|..++.++.....+ .........+++.+.+..| ++-...+.|.+.++........+.........+++.+ ++.
T Consensus 94 ~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~l 173 (349)
T 3v64_C 94 LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTI 173 (349)
T ss_dssp TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEE
T ss_pred CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeE
Confidence 68899999887544333 2223445789999755555 4555578999999875543333333334567788765 444
Q ss_pred EEEEeCC-CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 371 FATSSTD-NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 371 ~~~~~~d-~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
+++-... +.|..+++............-...+.|+++|++..|..+. ..+.|..+|+........+...-.....|++
T Consensus 174 y~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav 253 (349)
T 3v64_C 174 YWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 253 (349)
T ss_dssp EEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred EEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE
Confidence 4444444 7888888765433222222334678999998766665554 4678999998654332223222334566666
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.11 E-value=0.0015 Score=63.99 Aligned_cols=197 Identities=12% Similarity=0.125 Sum_probs=116.9
Q ss_pred ceEEEEEcC-CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 217 EVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 217 ~V~~~~~~p-~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
....++|+| ++..|..+...+.|+.+|+.++... . +.. .......++|+++|++|+++...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-----------~---~~~----~~~~P~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-----------T---VYS----GLSKVRTICWTHEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-----------E---EEC----CCSCEEEEEECTTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-----------E---Eec----CCCCcceEEEeCCCCEEEEEeCC
Confidence 457889998 4444555544478888888765321 1 111 23458899999999966666652
Q ss_pred -C----eEEEEECCCceE--EEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEee-ccCCeEEEEec
Q 010754 296 -G----QARIWSTNGDLK--CTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-HSGPTLDVDWR 366 (502)
Q Consensus 296 -g----~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~-~~~~v~~v~~~ 366 (502)
+ .+.+++..+... ..+.. ......++++| ++..+++-..++.|..++..++.....+.. .......++++
T Consensus 200 ~~~~~~~v~~~~~~g~~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~ 278 (430)
T 3tc9_A 200 NNNDRPNNYILTRESGFKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFH 278 (430)
T ss_dssp SCTTSEEEEEEEGGGTSCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEEC
T ss_pred CCcccceEEEEeCCCceeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEc
Confidence 2 344455444322 22222 23457788999 666666666778999999887654332222 22346789998
Q ss_pred CCCE--EEEEeCCCeEEEEEcCCC--cc--eEEEecC---------------CCcEE-EEEEc--------CCCCEEEEE
Q 010754 367 NNVS--FATSSTDNMIYVCKIGEN--RP--IKTFAGH---------------QGEVN-CVKWD--------PTGSLLASC 416 (502)
Q Consensus 367 ~~~~--~~~~~~d~~i~i~d~~~~--~~--~~~~~~h---------------~~~i~-~l~~s--------p~g~~las~ 416 (502)
+++. +++-...+.|..++.... .. +..+.+. -.... .++.. ++|.++++=
T Consensus 279 pdG~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD 358 (430)
T 3tc9_A 279 PSGNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCD 358 (430)
T ss_dssp TTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEE
T ss_pred CCCCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEE
Confidence 7654 455557788999887532 11 2233221 01233 45553 446666666
Q ss_pred eCCCcEEEEECCCCeeE
Q 010754 417 SDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 417 s~dg~i~iwd~~~~~~~ 433 (502)
...+.|+.++ ..+...
T Consensus 359 ~~n~~I~~i~-~~G~v~ 374 (430)
T 3tc9_A 359 RENHCIRILT-PQGRVT 374 (430)
T ss_dssp GGGTEEEEEC-TTSEEE
T ss_pred CCCcEEEEEC-CCCcEE
Confidence 6677888888 455443
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.09 E-value=0.00015 Score=76.62 Aligned_cols=194 Identities=13% Similarity=0.046 Sum_probs=111.4
Q ss_pred CeEEEEEC-CCCCEEEEEEC-CC----eEEEEECCCc-eEEEecCccCCeEEEEEecCCCEEEEEecC-----CeEEEEE
Q 010754 276 DVTTLDWN-GEGTLLATGSY-DG----QARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWD 343 (502)
Q Consensus 276 ~v~~l~~s-~~g~~l~s~~~-dg----~i~iwd~~~~-~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-----~~i~~wd 343 (502)
.+...+|| |||++||.+.. +| .|+++|+.+. .... ..-......+.|+|+|+.|+....| ..|++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~-~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA-DKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC-CCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC-ccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 57889999 99998886543 33 4999998765 4211 0011123568999999988877665 3688888
Q ss_pred cCCCce--EEEEee-ccCCeEEEEecCCCE-EEEEe---CCCeEEEEEcCCCc-ce--EEE-ecCCCcEEEEEEcCCCCE
Q 010754 344 VKTEEW--KQQFEF-HSGPTLDVDWRNNVS-FATSS---TDNMIYVCKIGENR-PI--KTF-AGHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 344 ~~~~~~--~~~~~~-~~~~v~~v~~~~~~~-~~~~~---~d~~i~i~d~~~~~-~~--~~~-~~h~~~i~~l~~sp~g~~ 412 (502)
+.++.. ...+.. .......+.|++++. ++..+ ....|+++|+.++. .. ..+ .........+.|+..+.+
T Consensus 254 lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l 333 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHL 333 (751)
T ss_dssp TTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEE
T ss_pred CCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEE
Confidence 877642 233332 223467788988775 33332 24468889988752 22 333 333445566666544444
Q ss_pred EEEEeCC----CcEEEEECCCCeeEEE-eccCCC--cEEEEEEccCCCCCCCCCccEEEEeecCceEEEEeee
Q 010754 413 LASCSDD----VTAKIWNMKQDKYVHD-LREHSK--EIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWICSI 478 (502)
Q Consensus 413 las~s~d----g~i~iwd~~~~~~~~~-~~~h~~--~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~~~ 478 (502)
++....+ ..|..+++.++..... +..+.. .+..+.| .+. ..++....++..++|..++
T Consensus 334 ~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~------~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 334 VILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSN------YLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSS------EEEEEEEETTEEEEEEEEC
T ss_pred EEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECC------EEEEEEEeCCEEEEEEEec
Confidence 4454443 2567777765222122 223333 3444444 333 2344455567777776553
No 273
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0017 Score=60.83 Aligned_cols=218 Identities=9% Similarity=-0.014 Sum_probs=134.0
Q ss_pred CceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE-EEEE
Q 010754 216 SEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l-~s~~ 293 (502)
..+.+++|++. +.++.+-...+.|..+++....... . .... .......+++.+.+..| ++-.
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~--------~-~~~~-------~l~~p~glavd~~~g~ly~~d~ 98 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ--------N-VVVS-------GLLSPDGLACDWLGEKLYWTDS 98 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC--------E-EEEE-------CCSCCCEEEEETTTTEEEEEET
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE--------E-EEcC-------CCCCccEEEEEcCCCeEEEEEC
Confidence 34678999985 5555565667888888876542100 0 0000 11246678888755444 4445
Q ss_pred CCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CC
Q 010754 294 YDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NV 369 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~ 369 (502)
..+.|.++++++.....+. ........+++.|.+..|+.+.. .+.|...++............-.....+++.+ ++
T Consensus 99 ~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pnglavd~~~~ 178 (318)
T 3sov_A 99 ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQ 178 (318)
T ss_dssp TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEETTTT
T ss_pred CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEEEEeccCC
Confidence 5689999999876544442 33455689999997666666553 57888888764332222222334567888875 44
Q ss_pred E-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEEEE-
Q 010754 370 S-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR- 447 (502)
Q Consensus 370 ~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~- 447 (502)
. +++-+..+.|..+++........+.+......++++.. +.++.+-...+.|..++..+++....+........+|+
T Consensus 179 ~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 179 KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence 4 44555678899999875433333333445677888863 44555666678999999888876666653322334444
Q ss_pred Ecc
Q 010754 448 WSP 450 (502)
Q Consensus 448 ~sp 450 (502)
++|
T Consensus 258 ~~~ 260 (318)
T 3sov_A 258 FSQ 260 (318)
T ss_dssp ECG
T ss_pred ecc
Confidence 444
No 274
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.07 E-value=0.0017 Score=63.70 Aligned_cols=196 Identities=9% Similarity=0.084 Sum_probs=116.9
Q ss_pred CceEEEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 216 SEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
.....++|+|+ ...|..+...+.|+.++..++.... +.. .......++|+++|+ |+.+.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~--------------~~~----~~~~P~giavd~dG~-lyVad 199 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDI--------------KTT----NIGQCADVNFTLNGD-MVVVD 199 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEE--------------ECC----CCSCEEEEEECTTCC-EEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEE--------------eec----CCCCccEEEECCCCC-EEEEc
Confidence 34578999995 3344444333889999987654211 111 234589999999999 44444
Q ss_pred CCC-----eEEEEECCCceE--EEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCceEEEEeec--cCCeEEE
Q 010754 294 YDG-----QARIWSTNGDLK--CTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--SGPTLDV 363 (502)
Q Consensus 294 ~dg-----~i~iwd~~~~~~--~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~--~~~v~~v 363 (502)
..+ .+...+..+... ..+. .-.....++++| ++..+++-..++.|+.+|..++.....+... ......+
T Consensus 200 ~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~i 278 (433)
T 4hw6_A 200 DQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHI 278 (433)
T ss_dssp CCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEE
T ss_pred CCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccE
Confidence 322 233333322111 1111 223456788999 6666656556789999998877763333221 1223468
Q ss_pred EecCCCE--EEEEeCCCeEEEEEcCC--Ccc--eEEEecC---------------CCcEEEEEE---------cCCCCEE
Q 010754 364 DWRNNVS--FATSSTDNMIYVCKIGE--NRP--IKTFAGH---------------QGEVNCVKW---------DPTGSLL 413 (502)
Q Consensus 364 ~~~~~~~--~~~~~~d~~i~i~d~~~--~~~--~~~~~~h---------------~~~i~~l~~---------sp~g~~l 413 (502)
++++++. +++-...+.|+.++... +.. ...+.+. -.....+++ .++|.++
T Consensus 279 a~dpdG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~ly 358 (433)
T 4hw6_A 279 VWHPTGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFY 358 (433)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEE
T ss_pred EEeCCCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEE
Confidence 8877653 45555678899988653 221 1233222 124677999 7788777
Q ss_pred EEEeCCCcEEEEECCCCee
Q 010754 414 ASCSDDVTAKIWNMKQDKY 432 (502)
Q Consensus 414 as~s~dg~i~iwd~~~~~~ 432 (502)
++-...+.|+.++. ++..
T Consensus 359 vaD~~n~~I~~~~~-~G~v 376 (433)
T 4hw6_A 359 FCDRDSHTVRVLTP-EGRV 376 (433)
T ss_dssp EEETTTTEEEEECT-TSEE
T ss_pred EEECCCCEEEEECC-CCCE
Confidence 77777888999984 5543
No 275
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.05 E-value=0.00012 Score=76.17 Aligned_cols=222 Identities=9% Similarity=0.057 Sum_probs=123.7
Q ss_pred CceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE-
Q 010754 216 SEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS- 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~- 293 (502)
....++++.+++++++.|+. +..+.+||..+.+.... .... ....-.+++..++|++++.|+
T Consensus 243 ~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~-----------~~~~-----~~R~~~s~~~~~dg~iyv~GG~ 306 (656)
T 1k3i_A 243 MFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPG-----------PDMQ-----VARGYQSSATMSDGRVFTIGGS 306 (656)
T ss_dssp CSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEEEEC-----------CCCS-----SCCSSCEEEECTTSCEEEECCC
T ss_pred CccccccCCCCCCEEEeCCCCCCceEEecCcCCceeEC-----------CCCC-----ccccccceEEecCCeEEEEeCc
Confidence 33445778889999999984 45899999876542210 0000 011123455567899999998
Q ss_pred CC-----CeEEEEECCCceEEEecCc-----cCCeEEEEEecCCCEEEEEecC---------CeEEEEEcCCCceEEEEe
Q 010754 294 YD-----GQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSCD---------KTAIVWDVKTEEWKQQFE 354 (502)
Q Consensus 294 ~d-----g~i~iwd~~~~~~~~~~~~-----~~~v~~l~~~~~~~~l~s~~~d---------~~i~~wd~~~~~~~~~~~ 354 (502)
.+ ..+.+||........+... ...-....+..++..++.++.+ ..+..||..+........
T Consensus 307 ~~~~~~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~ 386 (656)
T 1k3i_A 307 WSGGVFEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAG 386 (656)
T ss_dssp CCSSSCCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEE
T ss_pred ccCCcccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCC
Confidence 44 5789999876554443210 0000001122344444555444 457889988877654433
Q ss_pred eccC---------CeEEEEe--cCCCEEEEEeCCC-----------eEEEEEcCCCcceEEE--ecCCCc-EEEEEEcCC
Q 010754 355 FHSG---------PTLDVDW--RNNVSFATSSTDN-----------MIYVCKIGENRPIKTF--AGHQGE-VNCVKWDPT 409 (502)
Q Consensus 355 ~~~~---------~v~~v~~--~~~~~~~~~~~d~-----------~i~i~d~~~~~~~~~~--~~h~~~-i~~l~~sp~ 409 (502)
.... .-.++.+ ..+..+++|+.++ .|.+||..+..-.... ..+... -.+++..|+
T Consensus 387 ~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~ 466 (656)
T 1k3i_A 387 KRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPD 466 (656)
T ss_dssp ECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTT
T ss_pred ccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCC
Confidence 2221 2334444 2455566666432 6778887766543322 112222 234566789
Q ss_pred CCEEEEEeCC-----------CcEEEEECCCCeeEEE--eccCCCcEEEEEEccCCC
Q 010754 410 GSLLASCSDD-----------VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 410 g~~las~s~d-----------g~i~iwd~~~~~~~~~--~~~h~~~i~~v~~sp~g~ 453 (502)
|++++.|+.+ ..+.+||..+.+.... +...........+.|+|+
T Consensus 467 g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~ 523 (656)
T 1k3i_A 467 GSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGR 523 (656)
T ss_dssp SCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSC
T ss_pred CCEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcE
Confidence 9999999854 4689999887664321 111122223455678887
No 276
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.04 E-value=0.00077 Score=68.68 Aligned_cols=173 Identities=12% Similarity=0.003 Sum_probs=105.9
Q ss_pred EEEECCCCCEEEEEECC----------------CeEEEEECC-CceEEEecC--c--------cCCeEEEEEecCCC---
Q 010754 279 TLDWNGEGTLLATGSYD----------------GQARIWSTN-GDLKCTLSK--H--------KGPIFSLKWNKKGD--- 328 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~d----------------g~i~iwd~~-~~~~~~~~~--~--------~~~v~~l~~~~~~~--- 328 (502)
.+++.++...++.++.+ +.|..+|.. ++.+..+.. | ..++. +....+|+
T Consensus 239 ~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~ 317 (571)
T 2ad6_A 239 WYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTP 317 (571)
T ss_dssp CCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEE
T ss_pred eEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEE
Confidence 35566766677666532 358888876 455554432 2 12222 22234674
Q ss_pred EEEEEecCCeEEEEEcCCCceEEEEeecc-------------CCeE--------------------------EEEecCC-
Q 010754 329 YLLTGSCDKTAIVWDVKTEEWKQQFEFHS-------------GPTL--------------------------DVDWRNN- 368 (502)
Q Consensus 329 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~~-------------~~v~--------------------------~v~~~~~- 368 (502)
.++.++.+|.++++|..+|+.+..+.... .++. .+++.++
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 56788899999999999999887765332 0110 1233332
Q ss_pred CEEEEEe-------------------------------------CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCC
Q 010754 369 VSFATSS-------------------------------------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 411 (502)
Q Consensus 369 ~~~~~~~-------------------------------------~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~ 411 (502)
+.+++.. .++.|..||..+++.+.++... ..+.+..+...+.
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg 476 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGG 476 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTT
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCC
Confidence 3333322 3578999999999988777632 2232222333466
Q ss_pred EEEEEeCCCcEEEEECCCCeeEEEeccCCCc-EEEEEEccCCC
Q 010754 412 LLASCSDDVTAKIWNMKQDKYVHDLREHSKE-IYTIRWSPTGS 453 (502)
Q Consensus 412 ~las~s~dg~i~iwd~~~~~~~~~~~~h~~~-i~~v~~sp~g~ 453 (502)
+++.++.||.|+.||.++++.+..+...... -..+.+..+|.
T Consensus 477 ~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~ 519 (571)
T 2ad6_A 477 LVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGK 519 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred EEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCE
Confidence 7778999999999999999999888733211 12233556664
No 277
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=98.04 E-value=0.0035 Score=59.56 Aligned_cols=222 Identities=10% Similarity=0.099 Sum_probs=118.0
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC---CCEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLAT 291 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~s 291 (502)
-..-..++|.|+|+++++ ..+|.|.+++ ++.. ..+.... ...........|+|+|+ +..|++
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-----------~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv 94 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-----------STYAELS-VYHRGESGLLGLALHPRFPQEPYVYA 94 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-----------EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-----------cEeecce-EeecCCCCceeEEECCCCCCCCEEEE
Confidence 345679999999986555 5669999888 3321 0111111 11112346899999998 555555
Q ss_pred EEC-C-----CeEEEEECCCc------eE-EEec---CccCCeEEEEEecCCCEEEEEec-------------CCeEEEE
Q 010754 292 GSY-D-----GQARIWSTNGD------LK-CTLS---KHKGPIFSLKWNKKGDYLLTGSC-------------DKTAIVW 342 (502)
Q Consensus 292 ~~~-d-----g~i~iwd~~~~------~~-~~~~---~~~~~v~~l~~~~~~~~l~s~~~-------------d~~i~~w 342 (502)
+.. . +.|..|+..+. .+ ..+. ........|+|.|+|...++.+. .|.|.-+
T Consensus 95 ~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri 174 (352)
T 2ism_A 95 YRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRL 174 (352)
T ss_dssp EEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEE
T ss_pred EEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEE
Confidence 443 2 56777776542 11 1122 11123368999999976665432 2456666
Q ss_pred EcCCC------------ceEEEEeeccCCeEEEEecC-CCEEEEEe-CCCe--------EEEEEcCC-------------
Q 010754 343 DVKTE------------EWKQQFEFHSGPTLDVDWRN-NVSFATSS-TDNM--------IYVCKIGE------------- 387 (502)
Q Consensus 343 d~~~~------------~~~~~~~~~~~~v~~v~~~~-~~~~~~~~-~d~~--------i~i~d~~~------------- 387 (502)
+.... .....+.........++|.+ .+.+.++. ..+. |.+.....
T Consensus 175 ~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~ 254 (352)
T 2ism_A 175 TPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGND 254 (352)
T ss_dssp CTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCC
T ss_pred cCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCC
Confidence 65420 01111111112245677776 44444433 2222 33332211
Q ss_pred ---CcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee------EEEeccCCCcEEEEEEccCCC
Q 010754 388 ---NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY------VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 388 ---~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~------~~~~~~h~~~i~~v~~sp~g~ 453 (502)
..++..+. +......++| .+|.++++.-..+.|...++..... ...+-.-...+..+++.|||.
T Consensus 255 ~~~~~p~~~~~-~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 327 (352)
T 2ism_A 255 PRYRDPLYFWP-QGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGA 327 (352)
T ss_dssp TTSCCCSEECT-TCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSC
T ss_pred CCCcCCeEecC-CCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCc
Confidence 12333442 2335677888 4677766666667777777653321 122212235789999999997
No 278
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.00 E-value=0.0063 Score=58.63 Aligned_cols=211 Identities=12% Similarity=-0.023 Sum_probs=124.7
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE-ECCC
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG-SYDG 296 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~-~~dg 296 (502)
-.|.+..+. .+|+.+. ...|+.+++...... . +. .....+..++|++.+..|+.+ ...+
T Consensus 79 ~~C~~~~~~-~~l~~~~-~~~I~~i~~~~~~~~-----------~---~~----~~~~~~~gl~~d~~~~~ly~~D~~~~ 138 (386)
T 3v65_B 79 RSCKALGPE-PVLLFAN-RIDIRQVLPHRSEYT-----------L---LL----NNLENAIALDFHHRRELVFWSDVTLD 138 (386)
T ss_dssp SCEEECSSC-CEEEEEC-BSCEEEECTTSCCCE-----------E---EE----CSCSCEEEEEEETTTTEEEEEETTTT
T ss_pred CeECCcccc-ceeEeec-CccceeeccCCCcEE-----------E---Ee----cCCCccEEEEEecCCCeEEEEeCCCC
Confidence 345555553 3444433 356888887654321 0 00 112458899999866655555 4568
Q ss_pred eEEEEECCCceEEEe-cCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CCE-EE
Q 010754 297 QARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVS-FA 372 (502)
Q Consensus 297 ~i~iwd~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~~-~~ 372 (502)
.|..++.++.....+ .........+++.+.+..|+ +-...+.|.+.++........+.........++..+ ++. ++
T Consensus 139 ~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~ 218 (386)
T 3v65_B 139 RILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYW 218 (386)
T ss_dssp EEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred cEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEE
Confidence 999999887654433 22233457788987655554 545567899988865443333333334567777764 344 44
Q ss_pred EEeCC-CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEECCCCeeEEEeccCCCcEEEEEE
Q 010754 373 TSSTD-NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 448 (502)
Q Consensus 373 ~~~~d-~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~-s~dg~i~iwd~~~~~~~~~~~~h~~~i~~v~~ 448 (502)
+-... +.|..+++............-...+.|+|+|++..|..+ +..+.|..+|+........+.........|++
T Consensus 219 td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav 296 (386)
T 3v65_B 219 TDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 296 (386)
T ss_dssp EECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE
T ss_pred eccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE
Confidence 44444 788888876544333333334568899999876666555 45678999997644333233322334566666
No 279
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.0013 Score=61.38 Aligned_cols=191 Identities=15% Similarity=0.271 Sum_probs=118.2
Q ss_pred CCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECC----CCC---EEEEEE-C--C
Q 010754 226 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG----EGT---LLATGS-Y--D 295 (502)
Q Consensus 226 ~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~----~g~---~l~s~~-~--d 295 (502)
..++++.....+-+.+||+ +++.+..+.. +.+..+..-| .|+ ++++.. . +
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~-------------------g~~nnVD~r~~~~l~g~~~dla~as~R~~~~ 98 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT-------------------GKLNNVDIRYDFPLNGKKVDIAAASNRSEGK 98 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC-------------------SCEEEEEEEEEEEETTEEEEEEEEEECSTTC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC-------------------CCcccEEEecccccCCceEeEEEEeCCCCCC
Confidence 3456666667788999999 5554332221 2234444333 222 223333 3 5
Q ss_pred CeEEEEECC--CceEEEecC------cc-CCeEEEEE--ecC-CC-EEEEEecCCeEEEEEcC-------CCceEEEEee
Q 010754 296 GQARIWSTN--GDLKCTLSK------HK-GPIFSLKW--NKK-GD-YLLTGSCDKTAIVWDVK-------TEEWKQQFEF 355 (502)
Q Consensus 296 g~i~iwd~~--~~~~~~~~~------~~-~~v~~l~~--~~~-~~-~l~s~~~d~~i~~wd~~-------~~~~~~~~~~ 355 (502)
+.|++|+++ ...+..+.. .. ..+..+|+ +|. +. ++++...+|.+..|++. +.+.+++|..
T Consensus 99 n~l~vf~iDp~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l 178 (355)
T 3amr_A 99 NTIEIYAIDGKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM 178 (355)
T ss_dssp CEEEEEEECTTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC
T ss_pred CeEEEEEECCCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC
Confidence 789999763 334444421 11 56777888 664 43 68888889999999982 3355667665
Q ss_pred ccCCeEEEEec-CCCEEEEEeCCCeEEEEEcC-----CCcceEEEe-cC-CCcEEEEEE--cCCCC-EEEEEe-CCCcEE
Q 010754 356 HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIG-----ENRPIKTFA-GH-QGEVNCVKW--DPTGS-LLASCS-DDVTAK 423 (502)
Q Consensus 356 ~~~~v~~v~~~-~~~~~~~~~~d~~i~i~d~~-----~~~~~~~~~-~h-~~~i~~l~~--sp~g~-~las~s-~dg~i~ 423 (502)
. +.+-.+... ..+.++.+-.+..|..|+.. +.+.+..+. ++ ...+..|++ .++++ +|++++ .++++.
T Consensus 179 g-sq~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~ 257 (355)
T 3amr_A 179 N-SQTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYA 257 (355)
T ss_dssp S-SCEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEE
T ss_pred C-CCcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEE
Confidence 4 455556554 46778888888777777755 234454442 22 246888888 45555 555544 678999
Q ss_pred EEECC-CCeeEEEec
Q 010754 424 IWNMK-QDKYVHDLR 437 (502)
Q Consensus 424 iwd~~-~~~~~~~~~ 437 (502)
+||.. +.+.+..|.
T Consensus 258 Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 258 IYDRQGKNKYVADFR 272 (355)
T ss_dssp EEESSTTCCEEEEEE
T ss_pred EEECCCCCcEEEEEE
Confidence 99996 677777774
No 280
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.95 E-value=0.00095 Score=68.13 Aligned_cols=151 Identities=11% Similarity=0.084 Sum_probs=91.0
Q ss_pred EEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE------CCCeEEEEEC
Q 010754 230 LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------YDGQARIWST 303 (502)
Q Consensus 230 l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~------~dg~i~iwd~ 303 (502)
|+.++.|+.|..+|..+++..-...... ..........++. .++ .+++++ .+|.|+.+|.
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~--------~~~~~~~~ssP~v-----~~g-~V~vg~~g~e~g~~g~v~A~D~ 189 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSD--------IKVGSTLTIAPYV-----VKD-KVIIGSSGAELGVRGYLTAYDV 189 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCC--------GGGTCBCCSCCEE-----ETT-EEEECCBCGGGTCCCEEEEEET
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCC--------CCccceeecCCEE-----ECC-EEEEEecccccCCCCeEEEEEC
Confidence 7888889999999999887532111000 0000000011111 133 455554 3799999997
Q ss_pred C-CceEEEecCccCC-------------------------------------e-EEEEEecCCCEEEEEecC--------
Q 010754 304 N-GDLKCTLSKHKGP-------------------------------------I-FSLKWNKKGDYLLTGSCD-------- 336 (502)
Q Consensus 304 ~-~~~~~~~~~~~~~-------------------------------------v-~~l~~~~~~~~l~s~~~d-------- 336 (502)
. ++.+..+...... + ..+++.+....++.+..+
T Consensus 190 ~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~ 269 (599)
T 1w6s_A 190 KTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETM 269 (599)
T ss_dssp TTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGG
T ss_pred CCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcc
Confidence 6 5555544322110 0 134566777777777655
Q ss_pred --------CeEEEEEcCCCceEEEEeeccC----------CeEEEEe--cCC---CEEEEEeCCCeEEEEEcCCCcceEE
Q 010754 337 --------KTAIVWDVKTEEWKQQFEFHSG----------PTLDVDW--RNN---VSFATSSTDNMIYVCKIGENRPIKT 393 (502)
Q Consensus 337 --------~~i~~wd~~~~~~~~~~~~~~~----------~v~~v~~--~~~---~~~~~~~~d~~i~i~d~~~~~~~~~ 393 (502)
+.|..+|..+|+.+..+..... ++. +.. ..+ ..++.++.+|.++++|..+++.+..
T Consensus 270 r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 270 RPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp SCSCCTTSSEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred cCCCccccceEEEEeCCCCceeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 3899999999999888775321 222 222 123 2466788999999999999988776
Q ss_pred Ee
Q 010754 394 FA 395 (502)
Q Consensus 394 ~~ 395 (502)
..
T Consensus 349 ~~ 350 (599)
T 1w6s_A 349 NK 350 (599)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 281
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.92 E-value=0.011 Score=55.14 Aligned_cols=163 Identities=9% Similarity=0.000 Sum_probs=98.0
Q ss_pred EEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEcCC----CceEEEEeeccCCeEEE
Q 010754 289 LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKT----EEWKQQFEFHSGPTLDV 363 (502)
Q Consensus 289 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~~~----~~~~~~~~~~~~~v~~v 363 (502)
|+.+. ...|+..|+.+.....+......+.++.|++.+..|+.+ ...+.|..+++.. ......+.........+
T Consensus 4 ll~~~-~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~gl 82 (316)
T 1ijq_A 4 LFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGL 82 (316)
T ss_dssp EEEEC-BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEE
T ss_pred EEEEC-CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEE
Confidence 44443 356888888765443333344567899999876655544 4568999999876 22222222121233444
Q ss_pred Ee--cCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeeEEEe-cc
Q 010754 364 DW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-D-VTAKIWNMKQDKYVHDL-RE 438 (502)
Q Consensus 364 ~~--~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~-d-g~i~iwd~~~~~~~~~~-~~ 438 (502)
++ ..+..+++-...+.|.++++........+.........++++|.+..|..+.. . +.|...++.. +....+ ..
T Consensus 83 avd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~ 161 (316)
T 1ijq_A 83 AVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-VDIYSLVTE 161 (316)
T ss_dssp EEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-CCEEEEECS
T ss_pred EEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC-CCeEEEEEC
Confidence 44 45555666677889999998754433333334457889999997665555443 3 6788888753 332332 22
Q ss_pred CCCcEEEEEEccCCC
Q 010754 439 HSKEIYTIRWSPTGS 453 (502)
Q Consensus 439 h~~~i~~v~~sp~g~ 453 (502)
.-.....|+|+|++.
T Consensus 162 ~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 162 NIQWPNGITLDLLSG 176 (316)
T ss_dssp SCSCEEEEEEETTTT
T ss_pred CCCCceEEEEeccCC
Confidence 234578999998876
No 282
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.91 E-value=0.015 Score=54.47 Aligned_cols=218 Identities=10% Similarity=0.054 Sum_probs=118.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 294 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~ 294 (502)
...+.++.|.+.+..+++| .+|.| +.....++.=.. ...........+.+|.+++ +..++ ++.
T Consensus 35 ~~~~~~v~~~~~~~~~~~G-~~g~i-~~s~DgG~tW~~-------------~~~~~~~~~~~~~~i~~~~-~~~~~-~g~ 97 (327)
T 2xbg_A 35 TATILDMSFIDRHHGWLVG-VNATL-METRDGGQTWEP-------------RTLVLDHSDYRFNSVSFQG-NEGWI-VGE 97 (327)
T ss_dssp SSCEEEEEESSSSCEEEEE-TTTEE-EEESSTTSSCEE-------------CCCCCSCCCCEEEEEEEET-TEEEE-EEE
T ss_pred CCcEEEEEECCCCcEEEEc-CCCeE-EEeCCCCCCCeE-------------CCCCCCCCCccEEEEEecC-CeEEE-EEC
Confidence 3468899998777777754 56754 233332321000 0000011133588888876 44444 455
Q ss_pred CCeEEEEECC-CceEEEec---CccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-ceEEEEeeccCCeEEEEecCCC
Q 010754 295 DGQARIWSTN-GDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWRNNV 369 (502)
Q Consensus 295 dg~i~iwd~~-~~~~~~~~---~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~v~~v~~~~~~ 369 (502)
.|.|.. ..+ +..-.... .+...+..+.+.+++..++++ .++.|..- ...+ .+..........+..+.+.+++
T Consensus 98 ~g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~ 174 (327)
T 2xbg_A 98 PPIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSG 174 (327)
T ss_dssp TTEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTS
T ss_pred CCeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCC
Confidence 665544 333 33222222 233557788887766655554 45654322 2223 2333333445578888888777
Q ss_pred EEEEEeCCCeEEEEEcCCCcceEEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec-c---CCCcEE
Q 010754 370 SFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-E---HSKEIY 444 (502)
Q Consensus 370 ~~~~~~~d~~i~i~d~~~~~~~~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~-~---h~~~i~ 444 (502)
.+++.+.++.++.-.-..+..-..+ ......+..+.+.+++.+++. +.+|.+++++...++.-..+. . +...+.
T Consensus 175 ~~~~~g~~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~ 253 (327)
T 2xbg_A 175 EYVAVSSRGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGFL 253 (327)
T ss_dssp CEEEEETTSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCEE
T ss_pred cEEEEECCCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcceE
Confidence 7777777776654432112221111 234567889999999876654 567888877533344333222 1 223588
Q ss_pred EEEEccCCC
Q 010754 445 TIRWSPTGS 453 (502)
Q Consensus 445 ~v~~sp~g~ 453 (502)
+++|.|++.
T Consensus 254 ~v~~~~~~~ 262 (327)
T 2xbg_A 254 DLAYRTPNE 262 (327)
T ss_dssp EEEESSSSC
T ss_pred EEEecCCCE
Confidence 999998765
No 283
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.91 E-value=0.011 Score=58.39 Aligned_cols=203 Identities=8% Similarity=0.031 Sum_probs=118.6
Q ss_pred ceEEEEEcCC--CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEE-------CCCCC
Q 010754 217 EVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-------NGEGT 287 (502)
Q Consensus 217 ~V~~~~~~p~--~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------s~~g~ 287 (502)
....|+|+|. ++++++-...+.|++.|+.++... . +.............++| +++|+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-----------~---l~~~~~~~~~~p~~ia~~~~~~~~d~~G~ 205 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-----------S---PLNINTIPTNRIRSIAFNKKIEGYADEAE 205 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-----------E---EECCTTSSCSBEEEEEECCCBTTTBCTTC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-----------E---EEccCccccCCCcEEEEeecccccCCCCC
Confidence 3568999993 445555544567888888775421 1 11111112345899999 99999
Q ss_pred EEEEEECCC-------eEEEEECCC--ceE-----EEecCccCCeEEEEEecCC-CEEEEEecCCeEEEEEcC-------
Q 010754 288 LLATGSYDG-------QARIWSTNG--DLK-----CTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK------- 345 (502)
Q Consensus 288 ~l~s~~~dg-------~i~iwd~~~--~~~-----~~~~~~~~~v~~l~~~~~~-~~l~s~~~d~~i~~wd~~------- 345 (502)
.|+++...+ .|.+++... ... ..+.... ....++++|++ .++++-..++.|..+|+.
T Consensus 206 ~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~ 284 (496)
T 3kya_A 206 YMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIK 284 (496)
T ss_dssp EEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHH
T ss_pred EEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEeccccccccc
Confidence 777776654 266665333 221 2222222 34677889954 555556677889999997
Q ss_pred CCce-----------EEE-Eee-ccCCeEEEEecCCCE--EEEEeCCCeEEEEEcCC--Ccc--eEEEecC---C-----
Q 010754 346 TEEW-----------KQQ-FEF-HSGPTLDVDWRNNVS--FATSSTDNMIYVCKIGE--NRP--IKTFAGH---Q----- 398 (502)
Q Consensus 346 ~~~~-----------~~~-~~~-~~~~v~~v~~~~~~~--~~~~~~d~~i~i~d~~~--~~~--~~~~~~h---~----- 398 (502)
++.. ... +.. .......|+|++++. +++-...+.|+.++... +.. ..++.+. .
T Consensus 285 tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG 364 (496)
T 3kya_A 285 NGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDD 364 (496)
T ss_dssp TTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCC
T ss_pred CceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCC
Confidence 5553 222 222 223467899988764 45556778898876543 221 1233332 1
Q ss_pred -------CcEE-EEEEc-------CCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 399 -------GEVN-CVKWD-------PTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 399 -------~~i~-~l~~s-------p~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.... .++.. ++|.++++=+..+.|+.++ .++. +.++
T Consensus 365 ~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v~Ti 415 (496)
T 3kya_A 365 VGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-VSTY 415 (496)
T ss_dssp BGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-EEEE
T ss_pred cccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-EEEE
Confidence 1244 45554 5667777767788899998 4553 3444
No 284
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.89 E-value=0.0078 Score=63.42 Aligned_cols=213 Identities=8% Similarity=-0.093 Sum_probs=127.3
Q ss_pred eccCCCceEEEEEcCC-CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEE
Q 010754 211 LEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 289 (502)
Q Consensus 211 l~~H~~~V~~~~~~p~-~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l 289 (502)
+......+..++|++. +.++++-...+.|+.+++....... . ....+ . ........|++.+.+..|
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~-----~-~~~vi----~---~~l~~P~GLAvD~~~~~L 485 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVS-----S-YDTVI----S---RDIQAPDGLAVDWIHSNI 485 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------------CEEEE----C---SSCSCCCEEEEETTTTEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCc-----c-eeEEE----e---cCCCCcceeeeeecCCcE
Confidence 3334456788999985 4455555566778888876432100 0 00000 0 012346778888877655
Q ss_pred EEE-ECCCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEe
Q 010754 290 ATG-SYDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 365 (502)
Q Consensus 290 ~s~-~~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~ 365 (502)
+.+ ...+.|.+.++++.....+.. .-.....|+++|.+.+|+.+.. .+.|...++........+.........|++
T Consensus 486 Y~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLav 565 (791)
T 3m0c_C 486 YWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITL 565 (791)
T ss_dssp EEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEE
T ss_pred EEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEE
Confidence 555 456899999999876655532 3345789999997666665553 268888888654443333333345667776
Q ss_pred c-CCC-EEEEEeCCCeEEEEEcCCCcceEEEecC--CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 366 R-NNV-SFATSSTDNMIYVCKIGENRPIKTFAGH--QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 366 ~-~~~-~~~~~~~d~~i~i~d~~~~~~~~~~~~h--~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
. ..+ .+++-...+.|..+++........+... -....+|++.. +.++++-...+.|...|..+++.+..+.
T Consensus 566 D~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 566 DLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred ecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 5 334 4455556678999998665444444332 23456777743 3444555567888888887776665554
No 285
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.86 E-value=0.019 Score=54.50 Aligned_cols=241 Identities=10% Similarity=0.068 Sum_probs=128.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC---CCEEEEE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLATG 292 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~s~ 292 (502)
.....|+|.|+|+.|+.+...|.|++++.. +.....+.. ..............|+|+|+ +..|+++
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~----------~~~v~~~g~~g~~gia~~pdf~~~g~lYv~ 86 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSG----------VPDVWAHGQGGLLDVVLAPDFAQSRRIWLS 86 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBS----------CCCCCCSTTCSEEEEEECTTHHHHCEEEEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecC----------CcccccCCCCCceeEEECCCCCCCCEEEEE
Confidence 456799999999834444567999988743 221110000 00001112345789999996 4444444
Q ss_pred E-C-------CCeEEEEECCCc------eEEEecC------ccCCeEEEEEecCCCEEEEEec-------------CCeE
Q 010754 293 S-Y-------DGQARIWSTNGD------LKCTLSK------HKGPIFSLKWNKKGDYLLTGSC-------------DKTA 339 (502)
Q Consensus 293 ~-~-------dg~i~iwd~~~~------~~~~~~~------~~~~v~~l~~~~~~~~l~s~~~-------------d~~i 339 (502)
. . ...|..|+.+.. ....+.. .......|.|.|+|.+.++.+. .|.|
T Consensus 87 ~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I 166 (353)
T 2g8s_A 87 YSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKL 166 (353)
T ss_dssp EEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEE
T ss_pred EeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEE
Confidence 3 2 234666655421 1111111 1112357999999965555433 2467
Q ss_pred EEEEcCCCc------------eEEEEeeccCCeEEEEecC-CCEEEEEeCCC----eEEEEEcC--------C-------
Q 010754 340 IVWDVKTEE------------WKQQFEFHSGPTLDVDWRN-NVSFATSSTDN----MIYVCKIG--------E------- 387 (502)
Q Consensus 340 ~~wd~~~~~------------~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~----~i~i~d~~--------~------- 387 (502)
.-+|....- ....+.........++|.+ .+.+.++.... .|.+.... .
T Consensus 167 ~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~ 246 (353)
T 2g8s_A 167 VRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSG 246 (353)
T ss_dssp EEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTS
T ss_pred EEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCC
Confidence 777754320 1112222223467788877 56655543321 22221100 0
Q ss_pred --------------CcceEEEecCCCcEEEEEEcC-------CCCEEEEEeCCCcEEEEECCCCeeEEE--e-ccCCCcE
Q 010754 388 --------------NRPIKTFAGHQGEVNCVKWDP-------TGSLLASCSDDVTAKIWNMKQDKYVHD--L-REHSKEI 443 (502)
Q Consensus 388 --------------~~~~~~~~~h~~~i~~l~~sp-------~g~~las~s~dg~i~iwd~~~~~~~~~--~-~~h~~~i 443 (502)
..++..+. +...+..+.|.. +|.++++.-..+.|...++..++.+.. + ......+
T Consensus 247 ~~~~~~~~~~~~~~~~P~~~~~-~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp 325 (353)
T 2g8s_A 247 FKIPEAKGEIVAGTEQPVFYWK-DSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRI 325 (353)
T ss_dssp SCCTTCCBSSCTTSCCCSEEES-SCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCE
T ss_pred CccCcccCCCCCCccCCeEEeC-CCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCce
Confidence 11233333 234577888864 577777776778888888776654432 2 2223479
Q ss_pred EEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 444 YTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 444 ~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
..|++.|||. |++++.....+||..
T Consensus 326 ~~v~~~pdG~--------lyv~td~~~g~I~ri 350 (353)
T 2g8s_A 326 RDVRTGPDGY--------LYVLTDESSGELLKV 350 (353)
T ss_dssp EEEEECTTSC--------EEEEECSTTEEEEEE
T ss_pred eEEEECCCCc--------EEEEEeCCCCEEEEE
Confidence 9999999997 455555466677653
No 286
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.86 E-value=0.0011 Score=67.74 Aligned_cols=173 Identities=13% Similarity=0.165 Sum_probs=108.5
Q ss_pred EEEECCCCCEEEEEEC--------------------C----CeEEEEECC-CceEEEecC--cc--------CCeEEEEE
Q 010754 279 TLDWNGEGTLLATGSY--------------------D----GQARIWSTN-GDLKCTLSK--HK--------GPIFSLKW 323 (502)
Q Consensus 279 ~l~~s~~g~~l~s~~~--------------------d----g~i~iwd~~-~~~~~~~~~--~~--------~~v~~l~~ 323 (502)
.+++.|+..+++.++. | +.|..+|.. ++.+..+.. |. .++. +..
T Consensus 250 ~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~ 328 (582)
T 1flg_A 250 SASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDY 328 (582)
T ss_dssp CCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEE
T ss_pred CceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-Eee
Confidence 4567777777777763 2 578999975 555555432 21 2222 222
Q ss_pred e-cCCC---EEEEEecCCeEEEEEcCCCceEEEEeeccC--CeE------------------------------------
Q 010754 324 N-KKGD---YLLTGSCDKTAIVWDVKTEEWKQQFEFHSG--PTL------------------------------------ 361 (502)
Q Consensus 324 ~-~~~~---~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~--~v~------------------------------------ 361 (502)
. .+|+ .++.++.+|.++++|..+|+.+..+..... ...
T Consensus 329 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~ 408 (582)
T 1flg_A 329 KAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPF 408 (582)
T ss_dssp ECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCT
T ss_pred ecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCC
Confidence 2 4664 778899999999999999998877654320 000
Q ss_pred -------EEEecCC-CEEEEEe---------------------------------CCCeEEEEEcCCCcceEEEecCCCc
Q 010754 362 -------DVDWRNN-VSFATSS---------------------------------TDNMIYVCKIGENRPIKTFAGHQGE 400 (502)
Q Consensus 362 -------~v~~~~~-~~~~~~~---------------------------------~d~~i~i~d~~~~~~~~~~~~h~~~ 400 (502)
.+++.+. +.+++.. .+|.|..||+.+++.+.++.... +
T Consensus 409 ~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~-~ 487 (582)
T 1flg_A 409 LGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHL-P 487 (582)
T ss_dssp TCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESS-C
T ss_pred ccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCC-C
Confidence 1122222 2222221 35789999999999887766332 2
Q ss_pred EEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCc-EEEEEEccCCC
Q 010754 401 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE-IYTIRWSPTGS 453 (502)
Q Consensus 401 i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~-i~~v~~sp~g~ 453 (502)
+..-.....+.+++.|+.||.|+.||.++++.+.+++..... ..-+.|..+|.
T Consensus 488 ~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 488 LWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 221112224668888999999999999999999888743321 12256667775
No 287
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.86 E-value=0.021 Score=54.21 Aligned_cols=224 Identities=10% Similarity=0.080 Sum_probs=121.8
Q ss_pred CCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC---CCEEEE
Q 010754 215 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLAT 291 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~s 291 (502)
-.....++|.|+|+++++ ..+|.|++++ .++. . .+..+. ...........|+++|+ +..|++
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~--~----------~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv 92 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK--K----------LVASFD-VANVGEAGLLGLALHPEFPKKSWVYL 92 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE--E----------EEEECC-CCCSTTCSEEEEEECTTTTTSCEEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc--e----------Eeeccc-eeecCCCceeeEEeCCCCCcCCEEEE
Confidence 345679999999985555 5569998886 2221 0 111111 11112345889999997 455554
Q ss_pred EEC----C----CeEEEEECCCc------eEEE---ec-CccCCeEEEEEecCCCEEEEEec-------------CCeEE
Q 010754 292 GSY----D----GQARIWSTNGD------LKCT---LS-KHKGPIFSLKWNKKGDYLLTGSC-------------DKTAI 340 (502)
Q Consensus 292 ~~~----d----g~i~iwd~~~~------~~~~---~~-~~~~~v~~l~~~~~~~~l~s~~~-------------d~~i~ 340 (502)
+.. + +.|..|+..+. .... +. ........|.|.|+|.+.++.+. .|.|.
T Consensus 93 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ 172 (354)
T 3a9g_A 93 YASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKIL 172 (354)
T ss_dssp EEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEE
T ss_pred EEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEE
Confidence 443 2 56777776543 1111 21 11123467999999986666432 24566
Q ss_pred EEEcCCCc-------eEEEEeeccCCeEEEEecC-CCEEEEEeCCC----eEEEEEcCC----------------CcceE
Q 010754 341 VWDVKTEE-------WKQQFEFHSGPTLDVDWRN-NVSFATSSTDN----MIYVCKIGE----------------NRPIK 392 (502)
Q Consensus 341 ~wd~~~~~-------~~~~~~~~~~~v~~v~~~~-~~~~~~~~~d~----~i~i~d~~~----------------~~~~~ 392 (502)
-++....- ....+.........++|.+ .+.+.++.... .|.+..... ..++.
T Consensus 173 ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~ 252 (354)
T 3a9g_A 173 RVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVI 252 (354)
T ss_dssp EECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSE
T ss_pred EEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEe
Confidence 66553210 0111111122345678877 45555543322 233332111 02333
Q ss_pred EEecCCCcEEEEEEc-------CCCCEEEEEeCCCcEEEEECCCC-eeE--EEec-cCCCcEEEEEEccCCC
Q 010754 393 TFAGHQGEVNCVKWD-------PTGSLLASCSDDVTAKIWNMKQD-KYV--HDLR-EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 393 ~~~~h~~~i~~l~~s-------p~g~~las~s~dg~i~iwd~~~~-~~~--~~~~-~h~~~i~~v~~sp~g~ 453 (502)
.+.........++|. .+|.++++.-..+.|...++... +.. ..+. .....+..+++.|||.
T Consensus 253 ~~~~~~~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~ 324 (354)
T 3a9g_A 253 DTGSETWAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGG 324 (354)
T ss_dssp ECTTCCCCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSC
T ss_pred ecCCCCcCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCc
Confidence 441123457888884 56777777666778888887753 222 2332 2245789999999997
No 288
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.00084 Score=65.80 Aligned_cols=152 Identities=9% Similarity=0.116 Sum_probs=98.5
Q ss_pred CCeEEEEECC-CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC-C----eEEEEEcCCCc
Q 010754 275 KDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K----TAIVWDVKTEE 348 (502)
Q Consensus 275 ~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d-~----~i~~wd~~~~~ 348 (502)
.....|+|+| ++..|+++...+.|+.+|..+..+..+.........|+|++++++|+++... + .+.+++ ..+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~ 215 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESG 215 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGT
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCc
Confidence 3567899998 4556666665588999999886666655555668899999999977766542 1 344444 3333
Q ss_pred eE--EEEeeccCCeEEEEecC-CCE-EEEEeCCCeEEEEEcCCCcceEEEec-CCCcEEEEEEcCCCCEE-EEEeCCCcE
Q 010754 349 WK--QQFEFHSGPTLDVDWRN-NVS-FATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLL-ASCSDDVTA 422 (502)
Q Consensus 349 ~~--~~~~~~~~~v~~v~~~~-~~~-~~~~~~d~~i~i~d~~~~~~~~~~~~-h~~~i~~l~~sp~g~~l-as~s~dg~i 422 (502)
.. ..+.. ......+++.+ ++. +++-...+.|+.++...+.....+.. .......|+|+|+|++| ++-...+.|
T Consensus 216 ~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I 294 (430)
T 3tc9_A 216 FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYI 294 (430)
T ss_dssp SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEE
T ss_pred eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEE
Confidence 22 22222 23345666766 444 44455678899999876654222221 22457799999999955 444567889
Q ss_pred EEEECC
Q 010754 423 KIWNMK 428 (502)
Q Consensus 423 ~iwd~~ 428 (502)
..++..
T Consensus 295 ~~~~~d 300 (430)
T 3tc9_A 295 LRSDYD 300 (430)
T ss_dssp EEEEEE
T ss_pred EEEeCC
Confidence 998764
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.79 E-value=0.0022 Score=59.26 Aligned_cols=153 Identities=8% Similarity=0.127 Sum_probs=103.9
Q ss_pred CeEEEEECCCCCEEEEEE-CCCeEEEEECCCceEEEe-cCc-------cCCeEEEEE---ecCCCEEEEEec--------
Q 010754 276 DVTTLDWNGEGTLLATGS-YDGQARIWSTNGDLKCTL-SKH-------KGPIFSLKW---NKKGDYLLTGSC-------- 335 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~-~dg~i~iwd~~~~~~~~~-~~~-------~~~v~~l~~---~~~~~~l~s~~~-------- 335 (502)
.--+++|++....+..++ ..|.|..|+..+.....+ ... ...+..|.| .|++.++++...
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 355788988656666665 789999999874433222 211 113589999 688766665442
Q ss_pred -----CCeEEEEEcC---CCceEEEEeec-------------cCCeEEEEecCC-CEEEEEeCC-CeEEEEEcCCCcceE
Q 010754 336 -----DKTAIVWDVK---TEEWKQQFEFH-------------SGPTLDVDWRNN-VSFATSSTD-NMIYVCKIGENRPIK 392 (502)
Q Consensus 336 -----d~~i~~wd~~---~~~~~~~~~~~-------------~~~v~~v~~~~~-~~~~~~~~d-~~i~i~d~~~~~~~~ 392 (502)
++.|..||+. +++.+...... .....++...++ +.+++++.. +.|..++.... .+.
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG~-~~~ 172 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADGK-TVS 172 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTSC-CEE
T ss_pred cccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCCC-EEe
Confidence 6789999999 78777665531 123677877554 557778877 88777776544 333
Q ss_pred EEecC------CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 393 TFAGH------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 393 ~~~~h------~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
.+... ....+.|+++|+|++|+.....|.|..+|+.+
T Consensus 173 ~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 173 TFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp EEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred eeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 32211 12367999999999988887799999999874
No 290
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.75 E-value=0.011 Score=55.27 Aligned_cols=182 Identities=9% Similarity=0.133 Sum_probs=116.0
Q ss_pred CCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecC----CC---EEEEEec---CCeEEEEEc--CCCceEEE
Q 010754 285 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKK----GD---YLLTGSC---DKTAIVWDV--KTEEWKQQ 352 (502)
Q Consensus 285 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~----~~---~l~s~~~---d~~i~~wd~--~~~~~~~~ 352 (502)
...+++.....+-+.+||++++.+..+.. +.+..+..-|. |+ ++++... +++|.+|++ .++. +..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSLDGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEETTSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred CccEEEEEcCCCCEEEEcCCCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 34566767778899999999999888754 56677776652 22 2333333 578999977 3333 443
Q ss_pred Eee------cc-CCeEEEEe--cC-CC--EEEEEeCCCeEEEEEcC-------CCcceEEEecCCCcEEEEEEcCCCCEE
Q 010754 353 FEF------HS-GPTLDVDW--RN-NV--SFATSSTDNMIYVCKIG-------ENRPIKTFAGHQGEVNCVKWDPTGSLL 413 (502)
Q Consensus 353 ~~~------~~-~~v~~v~~--~~-~~--~~~~~~~d~~i~i~d~~-------~~~~~~~~~~h~~~i~~l~~sp~g~~l 413 (502)
+.. .. ..+..+|. ++ .+ .+++...+|.+..|++. +.+.+++|.. .+.+-.+..++....|
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd~~g~L 194 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADDEYGRL 194 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEETTTTEE
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcCCCCeE
Confidence 311 11 34555665 44 23 36677788999999983 2355677764 4678899999998999
Q ss_pred EEEeCCCcEEEEECC-----CCeeEEEec-cC-CCcEEEEEE--ccCCCCCCCCCccEEEEe-ecCceEEEEe
Q 010754 414 ASCSDDVTAKIWNMK-----QDKYVHDLR-EH-SKEIYTIRW--SPTGSGTNNPNQQLILAR-LIPYFLYWIC 476 (502)
Q Consensus 414 as~s~dg~i~iwd~~-----~~~~~~~~~-~h-~~~i~~v~~--sp~g~~~~~~~~~l~las-~~~~~~iw~~ 476 (502)
+.+-++.-|..++.. +++.+..+. ++ ...+..|+. .++|. .+|+.++ .+....+|..
T Consensus 195 yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~------gyLivSsQG~~s~~Vydr 261 (355)
T 3amr_A 195 YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK------GYLMASSQGNSSYAIYDR 261 (355)
T ss_dssp EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC------EEEEEEEGGGTEEEEEES
T ss_pred EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC------EEEEEEcCCCCEEEEEEC
Confidence 999998666666644 455665553 22 236888888 45443 2344444 2455666654
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.73 E-value=0.00027 Score=73.85 Aligned_cols=219 Identities=9% Similarity=-0.093 Sum_probs=126.0
Q ss_pred CceEEEEEcCCCCeEEEE-eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC-EEEEEE
Q 010754 216 SEVCACAWSPAGSLLASG-SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-LLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sg-s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~-~l~s~~ 293 (502)
..+..++|++.+..|+.+ ...+.|+.+++........ ..............|++.+.+. ++++-.
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~-------------~~~~i~~~~~~P~glavD~~~g~LY~tD~ 472 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-------------YDTVISRDIQAPDGLAVDWIHSNIYWTDS 472 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CC-------------CCCBCCSCC--CCCEECCCSSSBCEECCT
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcc-------------eEEEEeCCCCCcceEEEEeeCCcEEEEec
Confidence 456788999866555544 4567888888765110000 0000000012345677775444 444445
Q ss_pred CCCeEEEEECCCceEEEecC-ccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEecC--C
Q 010754 294 YDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN--N 368 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~--~ 368 (502)
..+.|.++++++.....+.. .......|+++|.+.+|+.+.. .+.|..+++........+.........|++.+ +
T Consensus 473 ~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~ 552 (699)
T 1n7d_A 473 VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSG 552 (699)
T ss_dssp TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTC
T ss_pred cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCC
Confidence 56889999998776555533 2244578899997665555443 26788887754322221111223355677764 3
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEec---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAG---HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~---h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
..+++-...+.|..+++..... ..+.. .......|++..+ .++++....+.|..++..+++.+..+.......+.
T Consensus 553 ~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~ 630 (699)
T 1n7d_A 553 RLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPED 630 (699)
T ss_dssp CEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCC
T ss_pred EEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcE
Confidence 4456666778899999865333 33321 1233456666554 45555566789999998889888777643334455
Q ss_pred EEEc
Q 010754 446 IRWS 449 (502)
Q Consensus 446 v~~s 449 (502)
|++.
T Consensus 631 i~v~ 634 (699)
T 1n7d_A 631 MVLF 634 (699)
T ss_dssp CCBC
T ss_pred EEEe
Confidence 5544
No 292
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.72 E-value=0.016 Score=56.02 Aligned_cols=165 Identities=9% Similarity=0.032 Sum_probs=105.1
Q ss_pred EEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCC----ceEEEEeeccCCeEE
Q 010754 288 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTE----EWKQQFEFHSGPTLD 362 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~----~~~~~~~~~~~~v~~ 362 (502)
+|+.+. ...|+..++.+.....+......+..|+|++.+..|+.+. ..+.|..+++... .....+.........
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 455444 4788988988765555555566789999998766665554 5678999988652 222223222333444
Q ss_pred E--EecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEecc
Q 010754 363 V--DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD--DVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 363 v--~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~--dg~i~iwd~~~~~~~~~~~~ 438 (502)
+ +|..+..+++-...+.|.+.++........+.........|+++|.+.+|+.... .+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 4 4455666777777889999998766554444444456889999997666655542 37788888765433333333
Q ss_pred CCCcEEEEEEccCCC
Q 010754 439 HSKEIYTIRWSPTGS 453 (502)
Q Consensus 439 h~~~i~~v~~sp~g~ 453 (502)
.-.....|+++|++.
T Consensus 244 ~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 244 NIQWPNGITLDLLSG 258 (400)
T ss_dssp SCSCEEEEEEETTTT
T ss_pred CCCceEEEEEEeCCC
Confidence 334578899998776
No 293
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.65 E-value=0.0088 Score=58.52 Aligned_cols=152 Identities=9% Similarity=0.014 Sum_probs=93.3
Q ss_pred CCeEEEEECCC--CCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecCC-----eEEEEEcCCC
Q 010754 275 KDVTTLDWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTE 347 (502)
Q Consensus 275 ~~v~~l~~s~~--g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~ 347 (502)
.....|+|+|+ +..|+.+...+.|+.++..+..+..+.........++|+++|+ |+.+...+ .+..++...+
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGT
T ss_pred CCCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCC
Confidence 34679999984 4455555544899999987666666655556689999999999 55544322 2333433222
Q ss_pred ce-EEEEeeccCCeEEEEecC-CCEEE-EEeCCCeEEEEEcCCCcceEEEec--CCCcEEEEEEcCCCCEEE-EEeCCCc
Q 010754 348 EW-KQQFEFHSGPTLDVDWRN-NVSFA-TSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLA-SCSDDVT 421 (502)
Q Consensus 348 ~~-~~~~~~~~~~v~~v~~~~-~~~~~-~~~~d~~i~i~d~~~~~~~~~~~~--h~~~i~~l~~sp~g~~la-s~s~dg~ 421 (502)
.. ...+. .......+++.+ ++.+. +-..++.|+.++..++.....+.. ....-..|+|+|+|++|. +-...+.
T Consensus 218 ~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~ 296 (433)
T 4hw6_A 218 FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHC 296 (433)
T ss_dssp TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTE
T ss_pred eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCE
Confidence 11 11121 223345566665 45444 444677899999886665233321 122345799999999554 4455788
Q ss_pred EEEEECC
Q 010754 422 AKIWNMK 428 (502)
Q Consensus 422 i~iwd~~ 428 (502)
|+.++..
T Consensus 297 I~~~~~d 303 (433)
T 4hw6_A 297 IYRVDYN 303 (433)
T ss_dssp EEEEEBC
T ss_pred EEEEeCC
Confidence 9998865
No 294
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.64 E-value=0.014 Score=59.58 Aligned_cols=202 Identities=10% Similarity=-0.007 Sum_probs=115.7
Q ss_pred CCeEEEEeC-CCcEEEEec-CCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCE----EEEEECCCeEEE
Q 010754 227 GSLLASGSG-DSTARIWTI-ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL----LATGSYDGQARI 300 (502)
Q Consensus 227 ~~~l~sgs~-dg~v~iw~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~----l~s~~~dg~i~i 300 (502)
+..|+.++. ++.|.-+|. .+++.+-........ ..............++++|.+.. |++++.|+.|..
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~------~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~A 135 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNP------AARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAA 135 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCG------GGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEE
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCc------cccccccccccccceEEEecCCcceeEEEEEcCCCEEEE
Confidence 445666666 788888888 777643211110000 00000000000122344343334 888889999999
Q ss_pred EECC-CceEEEecCcc----CCeEE-EEEecCCCEEEEEe------cCCeEEEEEcCCCceEEEEeeccCCe--------
Q 010754 301 WSTN-GDLKCTLSKHK----GPIFS-LKWNKKGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFHSGPT-------- 360 (502)
Q Consensus 301 wd~~-~~~~~~~~~~~----~~v~~-l~~~~~~~~l~s~~------~d~~i~~wd~~~~~~~~~~~~~~~~v-------- 360 (502)
+|.. ++.+....... ..+.+ ..+. + ..+++++ .++.|+.+|..+|+.+..+.......
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~-g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~ 213 (599)
T 1w6s_A 136 LNAETGETVWKVENSDIKVGSTLTIAPYVV-K-DKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDF 213 (599)
T ss_dssp EETTTCCEEEEEECCCGGGTCBCCSCCEEE-T-TEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTT
T ss_pred EECCCCCEEEeecCCCCCccceeecCCEEE-C-CEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCcccccccccc
Confidence 9975 55555443211 01111 1111 3 3555555 38999999999999988776432110
Q ss_pred ------------------------------EEEEec-CCCEEEEEeCC----------------CeEEEEEcCCCcceEE
Q 010754 361 ------------------------------LDVDWR-NNVSFATSSTD----------------NMIYVCKIGENRPIKT 393 (502)
Q Consensus 361 ------------------------------~~v~~~-~~~~~~~~~~d----------------~~i~i~d~~~~~~~~~ 393 (502)
..+.+. ..+.++.+..+ +.|..+|..+++.+..
T Consensus 214 ~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~ 293 (599)
T 1w6s_A 214 NIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFG 293 (599)
T ss_dssp TTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEE
T ss_pred ccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeE
Confidence 011221 24455665554 3899999999998887
Q ss_pred EecCCC----------cEEEEEEc-CCC---CEEEEEeCCCcEEEEECCCCeeEEEec
Q 010754 394 FAGHQG----------EVNCVKWD-PTG---SLLASCSDDVTAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 394 ~~~h~~----------~i~~l~~s-p~g---~~las~s~dg~i~iwd~~~~~~~~~~~ 437 (502)
+..... ++. +... .+| ..++.++.+|.+++.|..+++.+....
T Consensus 294 ~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 294 YQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeeccc
Confidence 764321 121 2222 567 578889999999999999999887654
No 295
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.61 E-value=0.0032 Score=64.20 Aligned_cols=83 Identities=13% Similarity=0.068 Sum_probs=56.3
Q ss_pred CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcE-EEEEEcCCCC-EE
Q 010754 336 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-NCVKWDPTGS-LL 413 (502)
Q Consensus 336 d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i-~~l~~sp~g~-~l 413 (502)
+|.|..||+.+++.+.++...........-..++.+++++.|+.++.||.++++.+.++....+.+ .-+.|..+|+ |+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qYv 544 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQYL 544 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEEEE
Confidence 578999999999988777643321111111346677779999999999999999999887543322 1256667776 44
Q ss_pred EEEeC
Q 010754 414 ASCSD 418 (502)
Q Consensus 414 as~s~ 418 (502)
++.+.
T Consensus 545 ~~~~G 549 (582)
T 1flg_A 545 GVTVG 549 (582)
T ss_dssp EEEEC
T ss_pred EEEcc
Confidence 44443
No 296
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.60 E-value=0.022 Score=53.12 Aligned_cols=159 Identities=9% Similarity=-0.001 Sum_probs=96.6
Q ss_pred CCeEEEEECCCce--EEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceE-EEEeeccCCe--EEEEecCC
Q 010754 295 DGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWK-QQFEFHSGPT--LDVDWRNN 368 (502)
Q Consensus 295 dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~-~~~~~~~~~v--~~v~~~~~ 368 (502)
...|+.+++++.. ..........+..+.|++.+..|+ +-...+.|..+++..+... ..+....... ..+.|..+
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 4678888887642 222222233567899998655555 4455778999998766321 1222221223 44555556
Q ss_pred CEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCeeEEEeccCCCcEEEE
Q 010754 369 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD--DVTAKIWNMKQDKYVHDLREHSKEIYTI 446 (502)
Q Consensus 369 ~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~--dg~i~iwd~~~~~~~~~~~~h~~~i~~v 446 (502)
..+++-...+.|.++++........+.........|+++|.+.+|+.+.. .+.|...++........+...-.....|
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 66777777889999998765433333344566889999997666655552 5778888876332222222222346889
Q ss_pred EEccCCC
Q 010754 447 RWSPTGS 453 (502)
Q Consensus 447 ~~sp~g~ 453 (502)
+|+|++.
T Consensus 172 avd~~~~ 178 (318)
T 3sov_A 172 TLDYEEQ 178 (318)
T ss_dssp EEETTTT
T ss_pred EEeccCC
Confidence 9999765
No 297
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.53 E-value=0.07 Score=56.21 Aligned_cols=158 Identities=11% Similarity=-0.071 Sum_probs=100.4
Q ss_pred CCeEEEEECCCCCEEEEE-ECCCeEEEEECCCc-----eEEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCC
Q 010754 275 KDVTTLDWNGEGTLLATG-SYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTE 347 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~-~~dg~i~iwd~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~ 347 (502)
..+..|+|++....|+.+ ...+.|+.+++++. ....+.........|++.+.+..|+ +-...+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 457899999865555544 45678999988753 2233333445567899998775555 4455789999998755
Q ss_pred ceEEEEeeccCCeEEEEecCC-CEEEEEe-CC-CeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEE
Q 010754 348 EWKQQFEFHSGPTLDVDWRNN-VSFATSS-TD-NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAK 423 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~-~~~~~~~-~d-~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~ 423 (502)
.....+.........|+..+. +.|+... .. +.|...++........+...-...+.|++++.+..|+.+. ..+.|.
T Consensus 504 ~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~ 583 (791)
T 3m0c_C 504 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSIS 583 (791)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEE
Confidence 443333334445777887653 4444433 33 7888888865544333433346789999998777666664 456788
Q ss_pred EEECCCCee
Q 010754 424 IWNMKQDKY 432 (502)
Q Consensus 424 iwd~~~~~~ 432 (502)
..++.....
T Consensus 584 ~~d~dG~~~ 592 (791)
T 3m0c_C 584 SIDVNGGNR 592 (791)
T ss_dssp EEETTSCSC
T ss_pred EEecCCCce
Confidence 888865433
No 298
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.48 E-value=0.083 Score=54.23 Aligned_cols=201 Identities=8% Similarity=-0.043 Sum_probs=126.1
Q ss_pred CceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE-E
Q 010754 216 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG-S 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~-~ 293 (502)
..+..++|++.+. ++++-..++.|..+++...... .+ .. ........|++.+.+..|+.+ .
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~-----------~v--~~----~g~~~P~GlAvD~~~~~LY~tD~ 99 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE-----------HV--VE----FGLDYPEGMAVDWLGKNLYWADT 99 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------EE--EC----SSCSCCCEEEEETTTTEEEEEET
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE-----------EE--Ee----CCCCCcceEEEEeCCCEEEEEEC
Confidence 4578999999654 4555556788888887653211 00 00 011246678887765555554 4
Q ss_pred CCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEecC-CC
Q 010754 294 YDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NV 369 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~~ 369 (502)
..+.|.+.++++.....+. ..-.....|++.|....|+.+.. .+.|...++....... +.........+++.+ ++
T Consensus 100 ~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~-l~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 100 GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTT-LVPNVGRANGLTIDYAKR 178 (628)
T ss_dssp TTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEE-EECSCSSEEEEEEETTTT
T ss_pred CCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEE-EECCCCCcceEEEccccC
Confidence 5688999999876544433 33345689999996666665553 5678888876544333 323344567777765 34
Q ss_pred E-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 370 S-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 370 ~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
. +++-...+.|..+++..... ..+........+|++.. +.++++-...+.|...|..+++....+
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred EEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEE
Confidence 4 55556678899999876544 44444445567888875 455555556788999997776544443
No 299
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.43 E-value=0.017 Score=59.32 Aligned_cols=205 Identities=9% Similarity=-0.032 Sum_probs=118.1
Q ss_pred CCceEEEEEcCCCCeEE-EEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE-
Q 010754 215 TSEVCACAWSPAGSLLA-SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG- 292 (502)
Q Consensus 215 ~~~V~~~~~~p~~~~l~-sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~- 292 (502)
...+..++|++.+..|+ +=...+.|..+++...... ... .. ........|++.+.+..|+.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~---------~~v---~~----~~~~~P~GlAvD~~~~~ly~~d 102 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---------QNV---VV----SGLLSPDGLACDWLGEKLYWTD 102 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C---------EEE---EC----SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce---------EEE---Ee----CCCCCcCeEEEEecCCEEEEEe
Confidence 35577999999655555 4444677888887653210 000 00 112357899999866655555
Q ss_pred ECCCeEEEEECCCceEEEec-CccCCeEEEEEecCCCEEEEEec--CCeEEEEEcCCCceEEEEeeccCCeEEEEecC-C
Q 010754 293 SYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 368 (502)
Q Consensus 293 ~~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~s~~~--d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~ 368 (502)
...+.|.+.++++.....+. ..-.....|++.|.+.+|+.+.. .+.|...++..................+++.+ +
T Consensus 103 ~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~ 182 (619)
T 3s94_A 103 SETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEE 182 (619)
T ss_dssp TTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccC
Confidence 45689999999987654443 33445688999997666665553 35777777654333332322334566777754 3
Q ss_pred CE-EEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 369 VS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 369 ~~-~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
+. +++-...+.|..+++..........+......+|++..+ .++.+-...+.|...|..+++....+
T Consensus 183 ~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 183 QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp TEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred CEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEE
Confidence 44 445456678888888754433222222223456777655 44445455778999998777544333
No 300
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.31 E-value=0.018 Score=53.21 Aligned_cols=140 Identities=9% Similarity=0.008 Sum_probs=92.0
Q ss_pred CccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCCCceEEEEeec-------cCCeEEEEe---cCCCEEEEEeC-----
Q 010754 313 KHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFH-------SGPTLDVDW---RNNVSFATSST----- 376 (502)
Q Consensus 313 ~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~~~~~~~~~~~-------~~~v~~v~~---~~~~~~~~~~~----- 376 (502)
....--.+++|++....|+.++ ..++|..||...+......... ...+..+.| .+.++++++..
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af 89 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSF 89 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTT
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccc
Confidence 3334456789998666666666 6899999998766544331111 013578899 45666554333
Q ss_pred ---------CCeEEEEEcC---CCcceEEEec--C-----------CCcEEEEEEcCCCCEEEEEeCC-CcEEEEECCCC
Q 010754 377 ---------DNMIYVCKIG---ENRPIKTFAG--H-----------QGEVNCVKWDPTGSLLASCSDD-VTAKIWNMKQD 430 (502)
Q Consensus 377 ---------d~~i~i~d~~---~~~~~~~~~~--h-----------~~~i~~l~~sp~g~~las~s~d-g~i~iwd~~~~ 430 (502)
+..+..||+. +++.+....- . ......++..++|+..++++.- +.|...+...
T Consensus 90 ~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pdG- 168 (334)
T 2p9w_A 90 NFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSADG- 168 (334)
T ss_dssp CTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECTTS-
T ss_pred cccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeCCC-
Confidence 6789999999 7877655541 1 1248899999999999999888 8776666543
Q ss_pred eeEEEec------cCCCcEEEEEEccCCC
Q 010754 431 KYVHDLR------EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 431 ~~~~~~~------~h~~~i~~v~~sp~g~ 453 (502)
+.+..+. ......+.|+++|+|.
T Consensus 169 ~~~~~~~~~~~~~~~~~G~nGIv~~pdg~ 197 (334)
T 2p9w_A 169 KTVSTFAWESGNGGQRPGYSGITFDPHSN 197 (334)
T ss_dssp CCEEEEEECCCCSSSCCSCSEEEEETTTT
T ss_pred CEEeeeeecCCCcccccCcceEEEeCCCC
Confidence 2222221 1122367999999997
No 301
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.10 E-value=0.033 Score=54.87 Aligned_cols=151 Identities=9% Similarity=0.042 Sum_probs=94.0
Q ss_pred CeEEEEECCC-CCEEEEE-ECCCeEEEEECCCceEEEecCcc----CCeEEEEE-------ecCCCEEEEEecCC-----
Q 010754 276 DVTTLDWNGE-GTLLATG-SYDGQARIWSTNGDLKCTLSKHK----GPIFSLKW-------NKKGDYLLTGSCDK----- 337 (502)
Q Consensus 276 ~v~~l~~s~~-g~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~----~~v~~l~~-------~~~~~~l~s~~~d~----- 337 (502)
....|+|+|. ...|+++ ...+.|++.|..+..+..+.... .....|+| ++++++|+++...+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 4444444 44578999998886666554321 24789999 99999777766554
Q ss_pred --eEEEEEcCC-CceE-----EEEeeccCCeEEEEecC--CCEEEEEeCCCeEEEEEcC-------CCcc----------
Q 010754 338 --TAIVWDVKT-EEWK-----QQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIG-------ENRP---------- 390 (502)
Q Consensus 338 --~i~~wd~~~-~~~~-----~~~~~~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~-------~~~~---------- 390 (502)
.|.+++... +... ..+... .....++..+ +..+++-..++.|+.+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 366666333 2321 222221 2234555555 3446666778889999987 4442
Q ss_pred -eEE-Ee-cCCCcEEEEEEcCCCCEEEEE-eCCCcEEEEEC
Q 010754 391 -IKT-FA-GHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNM 427 (502)
Q Consensus 391 -~~~-~~-~h~~~i~~l~~sp~g~~las~-s~dg~i~iwd~ 427 (502)
... +. +.......|+|+|+|++|..+ +..+.|+.++.
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEec
Confidence 122 22 223456799999999964444 55678888654
No 302
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.06 E-value=0.34 Score=49.54 Aligned_cols=157 Identities=11% Similarity=-0.076 Sum_probs=96.9
Q ss_pred CCeEEEEECCCCCEEEEEEC-CCeEEEEECCCce--EEEecCccCCeEEEEEecCCCEEE-EEecCCeEEEEEcCCCceE
Q 010754 275 KDVTTLDWNGEGTLLATGSY-DGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWK 350 (502)
Q Consensus 275 ~~v~~l~~s~~g~~l~s~~~-dg~i~iwd~~~~~--~~~~~~~~~~v~~l~~~~~~~~l~-s~~~d~~i~~wd~~~~~~~ 350 (502)
..+..|+|++.+..|+.+.. .+.|..+++++.. ...+...-.....|++.+.+..|+ +-...+.|.+.++......
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~ 119 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 119 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE
Confidence 45789999997777766654 5789999987652 223333335678999998665555 4455789999998755433
Q ss_pred EEEeeccCCeEEEEecC-CCEEEEEeC--CCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEE
Q 010754 351 QQFEFHSGPTLDVDWRN-NVSFATSST--DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWN 426 (502)
Q Consensus 351 ~~~~~~~~~v~~v~~~~-~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd 426 (502)
..+.........|++.+ ++.+..+.. .+.|...++............-...+.|++++++..|..+. ..+.|...|
T Consensus 120 ~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~ 199 (619)
T 3s94_A 120 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSN 199 (619)
T ss_dssp EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEES
T ss_pred EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEec
Confidence 33323334456677754 344443332 45677777654433333333445688999999766665554 467788888
Q ss_pred CCCCe
Q 010754 427 MKQDK 431 (502)
Q Consensus 427 ~~~~~ 431 (502)
+....
T Consensus 200 ~dG~~ 204 (619)
T 3s94_A 200 LDGTN 204 (619)
T ss_dssp SSCCE
T ss_pred CCCCc
Confidence 86543
No 303
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.01 E-value=0.2 Score=45.94 Aligned_cols=209 Identities=14% Similarity=0.191 Sum_probs=135.1
Q ss_pred EEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEE
Q 010754 221 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 300 (502)
Q Consensus 221 ~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~i 300 (502)
.-.+|..+.+|.-. ..++.|+|+++..... ... ...+|.-=.|-.+. .|+..+ +..|+-
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~klk-------------s~~-----~~e~VvfWkWis~~-~L~lVT-~taVyH 130 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKMK-------------AHT-----MTDDVTFWKWISLN-TVALVT-DNAVYH 130 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEEE-------------EEE-----CSSCEEEEEECSSS-EEEEEE-SSEEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhhc-------------cee-----cCCccEEEEecCCC-eEEEEc-CCcEEE
Confidence 34578777777766 5789999999865321 111 12467777776554 444444 478999
Q ss_pred EECCC--ceEEEecCc----cCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCceEEEEeeccCCeEEEEecC
Q 010754 301 WSTNG--DLKCTLSKH----KGPIFSLKWNKKGDYLLTGSC-------DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 367 (502)
Q Consensus 301 wd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~l~s~~~-------d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~ 367 (502)
|++.+ .....+..| ...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|...-..+....
T Consensus 131 Ws~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~g 209 (365)
T 2xzh_A 131 WSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEG 209 (365)
T ss_dssp EESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEECCTT
T ss_pred EcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEecCC
Confidence 99874 455555554 346777778888898775442 367889987644 4566777765544443322
Q ss_pred C----CEEEEEeC---CCeEEEEEcCCC---c------ceEEEecC---CCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 368 N----VSFATSST---DNMIYVCKIGEN---R------PIKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 368 ~----~~~~~~~~---d~~i~i~d~~~~---~------~~~~~~~h---~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
+ ..|+.+.. .+++++.++... . .+..+... .+-..++..++.-..+..-+.-|.|++||+.
T Consensus 210 ~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDle 289 (365)
T 2xzh_A 210 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 289 (365)
T ss_dssp CSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcc
Confidence 1 22333322 258999998543 1 11112111 3446688888888899999999999999999
Q ss_pred CCeeEEEeccCCCcEEEEEEccC
Q 010754 429 QDKYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 429 ~~~~~~~~~~h~~~i~~v~~sp~ 451 (502)
++.++..-+-...+|...+-+..
T Consensus 290 Tgt~i~~nrIS~d~iF~ta~~~~ 312 (365)
T 2xzh_A 290 TGTCIYMNRISGETIFVTAPHEA 312 (365)
T ss_dssp TCCEEEEEECCSSCEEEEEEEGG
T ss_pred cCcEEEEeccCCCceEEecccCC
Confidence 99999877766667766665444
No 304
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.93 E-value=0.12 Score=49.34 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=88.8
Q ss_pred cCCCEEEEEecCCeEEEEEcCCCceEEEEeec----cCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc-----------
Q 010754 325 KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH----SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR----------- 389 (502)
Q Consensus 325 ~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~----~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~----------- 389 (502)
.+|..++.+ .++.||.-++......+.+... -..+..+..++++.+++-..+..|.|..+..+.
T Consensus 30 ~n~t~i~~a-~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 30 QNGTRIVFI-QDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTTEEEEE-ETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred cCCCEEEEE-ECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 344444443 3456666666544334444432 224667888888888888888999999887331
Q ss_pred -ceEEEec------CCCcEEEEEEcCC---CCEEEEEeCCCcEEEEECCCC--eeEEEec---------cCCCcEEEEEE
Q 010754 390 -PIKTFAG------HQGEVNCVKWDPT---GSLLASCSDDVTAKIWNMKQD--KYVHDLR---------EHSKEIYTIRW 448 (502)
Q Consensus 390 -~~~~~~~------h~~~i~~l~~sp~---g~~las~s~dg~i~iwd~~~~--~~~~~~~---------~h~~~i~~v~~ 448 (502)
..+.+.- ...+|..+.|+|- +..|++-..|+.||+||+... ++. .++ .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1223332 2467999999995 568999999999999999752 122 222 22356889999
Q ss_pred ccCCCCCCCCCccEEEEe--ecCceE
Q 010754 449 SPTGSGTNNPNQQLILAR--LIPYFL 472 (502)
Q Consensus 449 sp~g~~~~~~~~~l~las--~~~~~~ 472 (502)
.++|- .|.+++ ..|++.
T Consensus 188 g~~~l-------TLYvl~~t~~GDIY 206 (452)
T 3pbp_A 188 SKDGL-------TLYCLNTTEGGDIF 206 (452)
T ss_dssp CTTSS-------CEEEEECTTSCEEE
T ss_pred cCCCc-------EEEEEecCCCCCEE
Confidence 99654 666655 334443
No 305
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.87 E-value=0.29 Score=46.14 Aligned_cols=142 Identities=15% Similarity=0.206 Sum_probs=81.4
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEE--Ee---cCccCCeEEEEEecC---CCEEEEEecC------CeEEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC--TL---SKHKGPIFSLKWNKK---GDYLLTGSCD------KTAIV 341 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~--~~---~~~~~~v~~l~~~~~---~~~l~s~~~d------~~i~~ 341 (502)
....|+|.|+|++++ +...|.|++++ .+.... .+ .........|+|+|+ +..|+++... +.|..
T Consensus 32 ~P~~ia~~pdG~l~V-~e~~g~I~~i~-~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 32 VPWALAFLPDGGMLI-AERPGRIRLFR-EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp CEEEEEECTTSCEEE-EETTTEEEEEE-TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred CceEEEEcCCCeEEE-EeCCCeEEEEE-CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 478999999998554 56679999998 543221 11 112346789999998 5566555442 67888
Q ss_pred EEcCCCce------EEEEee---ccCCeEEEEecCCCEEEEEeCC--------------CeEEEEEcCCC----------
Q 010754 342 WDVKTEEW------KQQFEF---HSGPTLDVDWRNNVSFATSSTD--------------NMIYVCKIGEN---------- 388 (502)
Q Consensus 342 wd~~~~~~------~~~~~~---~~~~v~~v~~~~~~~~~~~~~d--------------~~i~i~d~~~~---------- 388 (502)
|+...+.. +..+.. .......+.|.+++.+..+..+ +.|.-++....
T Consensus 110 ~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~ 189 (352)
T 2ism_A 110 LRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPGNPFLGR 189 (352)
T ss_dssp EEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTTCTTTTC
T ss_pred EEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCCCcccCC
Confidence 88764421 111221 0112357888777766655322 46666665431
Q ss_pred ---cceEEEecCCCcEEEEEEcC-CCCEEEEEeCCC
Q 010754 389 ---RPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDV 420 (502)
Q Consensus 389 ---~~~~~~~~h~~~i~~l~~sp-~g~~las~s~dg 420 (502)
.....-.++ .....++|+| +|.++++-...+
T Consensus 190 ~~~~~~i~a~G~-rnp~g~a~d~~~g~l~v~d~g~~ 224 (352)
T 2ism_A 190 RGARPEVYSLGH-RNPQGLAWHPKTGELFSSEHGPS 224 (352)
T ss_dssp TTSCTTEEEECC-SEECCCEECTTTCCEEEEEECC-
T ss_pred CCCCccEEEEcC-CCcccEEEECCCCCEEEEEcCCC
Confidence 111111233 3366799999 677666544433
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.84 E-value=0.33 Score=45.65 Aligned_cols=173 Identities=13% Similarity=0.104 Sum_probs=98.7
Q ss_pred eEEEEECCCCCEEEEEE------------CCCeEEEEECCC--ceEE--EecC-----ccCCeEEEEEec--CCC-EEEE
Q 010754 277 VTTLDWNGEGTLLATGS------------YDGQARIWSTNG--DLKC--TLSK-----HKGPIFSLKWNK--KGD-YLLT 332 (502)
Q Consensus 277 v~~l~~s~~g~~l~s~~------------~dg~i~iwd~~~--~~~~--~~~~-----~~~~v~~l~~~~--~~~-~l~s 332 (502)
.-.+...|+|..+++++ .+|.|.++|.+. .... .+.+ .......|.+.+ ++. +|++
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~V 131 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLV 131 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEE
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEE
Confidence 44566778876655542 689999999762 1222 2222 234567777766 353 4554
Q ss_pred Eec---CCeEEEEEcCCCc-e---EEEEeec-cCCeEEEEecCCCEEEEEeC------------------CCeEEEEEcC
Q 010754 333 GSC---DKTAIVWDVKTEE-W---KQQFEFH-SGPTLDVDWRNNVSFATSST------------------DNMIYVCKIG 386 (502)
Q Consensus 333 ~~~---d~~i~~wd~~~~~-~---~~~~~~~-~~~v~~v~~~~~~~~~~~~~------------------d~~i~i~d~~ 386 (502)
+.. +.+|.+|++.... . +..+.+. -....++...+++.|.++.. .|.|+-++.
T Consensus 132 vnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 132 VNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp EECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred EECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 432 4678888775432 2 2223221 22467888877777666543 244555554
Q ss_pred CCcceEEEecCCCcEEEEEEcCCCCEEEEEe-CCCcEEEEECCC-CeeE--EEeccCCCcEEEEEEcc-CCC
Q 010754 387 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQ-DKYV--HDLREHSKEIYTIRWSP-TGS 453 (502)
Q Consensus 387 ~~~~~~~~~~h~~~i~~l~~sp~g~~las~s-~dg~i~iwd~~~-~~~~--~~~~~h~~~i~~v~~sp-~g~ 453 (502)
++ +..+...-...+.|+|+||++.|..+. ..+.|..|++.. ++.. ..+ ...+..-.++..+ +|.
T Consensus 211 -~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 211 -ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTGD 279 (355)
T ss_dssp -TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTCC
T ss_pred -Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCCc
Confidence 33 333333335678999999998876665 478899999863 3321 222 1233455566666 355
No 307
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.72 E-value=0.39 Score=44.95 Aligned_cols=234 Identities=10% Similarity=0.050 Sum_probs=125.1
Q ss_pred eEEeccCCCceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCC--
Q 010754 208 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 285 (502)
Q Consensus 208 ~~~l~~H~~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~-- 285 (502)
+.++-..-..-+.++|.|+|.++++-...|.|++++..++.. ..+..+.............|+++|+
T Consensus 24 ~~~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-----------~~v~~~~~v~~~g~~GllGia~~Pdf~ 92 (347)
T 3das_A 24 LRTVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-----------TELGEVPGVSPSGEGGLLGIALSPDYA 92 (347)
T ss_dssp EEEEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----------EEEEECTTCCCBTTBSEEEEEECTTHH
T ss_pred eEEeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-----------eeecccCceeecCCCCceeeEeccccc
Confidence 344444456678999999999877776589999887554331 0111111112223456899999995
Q ss_pred -CCEEEEE-E--CCCeEEEEECCC---------ceEE---Eec-CccCCeEEEEEecCCCEEEEEec-------------
Q 010754 286 -GTLLATG-S--YDGQARIWSTNG---------DLKC---TLS-KHKGPIFSLKWNKKGDYLLTGSC------------- 335 (502)
Q Consensus 286 -g~~l~s~-~--~dg~i~iwd~~~---------~~~~---~~~-~~~~~v~~l~~~~~~~~l~s~~~------------- 335 (502)
+..|++. + .++.|.-|.... .... .+. .....-..|.|.|+|.+.++.+.
T Consensus 93 ~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~ 172 (347)
T 3das_A 93 SDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSL 172 (347)
T ss_dssp HHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCS
T ss_pred cCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCC
Confidence 3444443 2 344555555443 1111 121 11223467999999987776542
Q ss_pred CCeEEEEEcCCCc-------eEEEEeeccCCeEEEEecCCCEEEEEeC--CCeEEEEEcCCC------------------
Q 010754 336 DKTAIVWDVKTEE-------WKQQFEFHSGPTLDVDWRNNVSFATSST--DNMIYVCKIGEN------------------ 388 (502)
Q Consensus 336 d~~i~~wd~~~~~-------~~~~~~~~~~~v~~v~~~~~~~~~~~~~--d~~i~i~d~~~~------------------ 388 (502)
.|.|.-.+....- ....+...-.....++|.+.+.+.++-. ++.-.|.-+..+
T Consensus 173 ~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~ 252 (347)
T 3das_A 173 GGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFH 252 (347)
T ss_dssp TTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCC
T ss_pred CCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCcccc
Confidence 3455555543220 0111221112345677877666555533 221222222211
Q ss_pred cceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee----EEEeccCCCcEEEEEEccCCC
Q 010754 389 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY----VHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 389 ~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~----~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.++..+..+......++|. +|.++...-..+.|....+..... ..-+.+....+..|+..|||.
T Consensus 253 ~P~~~~~~~~~ap~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~ 320 (347)
T 3das_A 253 DPVAQWSTDEASPSGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDK 320 (347)
T ss_dssp CCSEEECTTTCCEEEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTE
T ss_pred CCcEecCCCCCCCcceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCc
Confidence 1344444333466788887 466666555556666556554432 223334456799999999997
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.65 E-value=0.73 Score=47.17 Aligned_cols=210 Identities=9% Similarity=-0.062 Sum_probs=122.6
Q ss_pred CceEEEEEcCCCCeEEEE-eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEE-EEE
Q 010754 216 SEVCACAWSPAGSLLASG-SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-TGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sg-s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~-s~~ 293 (502)
..+.+++|.+....|+.+ ...+.|+.+++...... ..+... .........+..|++...++.|+ +-+
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~----------~v~~~~-~~~~~~~~~p~glAvD~~~~nLY~td~ 408 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGF----------TVVVSS-VPSQNLEIQPYDLSIDIYSRYIYWTCE 408 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----------EEEC---------CCCEEEEEEETTTTEEEEEET
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCce----------EEEEcc-cccccccCCcceEEeeccCCeEEEEcC
Confidence 457789998865544444 44667877776543210 000000 00000123578999998766555 445
Q ss_pred CCCeEEEEECCCceEEEec-CccCCeEEEEEecC-CCEEEEEecCC--eEEEEEcCCCceEEEEeeccCCeEEEEecC-C
Q 010754 294 YDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKK-GDYLLTGSCDK--TAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 368 (502)
Q Consensus 294 ~dg~i~iwd~~~~~~~~~~-~~~~~v~~l~~~~~-~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~-~ 368 (502)
..+.|.+.++++.....+. ..-....+|++.|. |..+++-.... .|...++............-.....++..+ .
T Consensus 409 ~~~~I~v~~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~~~l~~~~l~~P~gla~D~~~ 488 (628)
T 4a0p_A 409 ATNVINVTRLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTEREVLFFSGLSKPIALALDSRL 488 (628)
T ss_dssp TTTEEEEEETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSCEEEECSSCSCEEEEEEETTT
T ss_pred CCCEEEEEECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCcEEEEeccCCCccEEEEeCCC
Confidence 6689999999987655443 33456799999994 44444433232 566666653333222332333456777754 3
Q ss_pred CEE-EEEeCCCeEEEEEcCCCcceEEEe-cCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 369 VSF-ATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 369 ~~~-~~~~~d~~i~i~d~~~~~~~~~~~-~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
+.+ ++-+..+.|..+++.... .+++. .......+|++.. +.++.+=...+.|...|..+++....+..
T Consensus 489 ~~LYw~D~~~~~I~~~~~dG~~-r~~~~~~~~~~P~glav~~-~~ly~tD~~~~~i~~~~k~~G~~~~~i~~ 558 (628)
T 4a0p_A 489 GKLFWADSDLRRIESSDLSGAN-RIVLEDSNILQPVGLTVFE-NWLYWIDKQQQMIEKIDMTGREGRTKVQA 558 (628)
T ss_dssp TEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCEEEEEEET-TEEEEEETTTTEEEEEETTSSSCCEEEEC
T ss_pred CEEEEEeCCCCEEEEEeCCCCc-eEEEEcCCCCCcEEEEEEC-CEEEEEECCCCeEEEEECcCCCCcEEEec
Confidence 444 444556889999985543 34443 3345577888765 55555555667888888887776555543
No 309
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.54 E-value=0.0049 Score=64.32 Aligned_cols=159 Identities=10% Similarity=0.056 Sum_probs=91.9
Q ss_pred CCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe-cCCeEEEEEcCC----CceEEEEeec--cCCeEEEEecC
Q 010754 295 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKT----EEWKQQFEFH--SGPTLDVDWRN 367 (502)
Q Consensus 295 dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~-~d~~i~~wd~~~----~~~~~~~~~~--~~~v~~v~~~~ 367 (502)
.+.|+..++.+.....+......+..|+|++.+..|+.+. ..+.|+.+++.. ......+... ...-..+.|..
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~ 464 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 464 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSS
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeC
Confidence 4678888877655544444445667899998777666654 457899999875 2211111111 11123444555
Q ss_pred CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC-C-CcEEEEECCCCeeEEEeccCCCcEEE
Q 010754 368 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-D-VTAKIWNMKQDKYVHDLREHSKEIYT 445 (502)
Q Consensus 368 ~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~-d-g~i~iwd~~~~~~~~~~~~h~~~i~~ 445 (502)
+..+++-...+.|.++++........+.........|+++|.+.+|+.+.. . +.|.++++........+...-.....
T Consensus 465 g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnG 544 (699)
T 1n7d_A 465 SNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 544 (699)
T ss_dssp SBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCC
T ss_pred CcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccE
Confidence 566666667788999998755433333322345678899997655544432 2 67877776533221111122234567
Q ss_pred EEEccCCC
Q 010754 446 IRWSPTGS 453 (502)
Q Consensus 446 v~~sp~g~ 453 (502)
|+|+|++.
T Consensus 545 lavd~~~~ 552 (699)
T 1n7d_A 545 ITLDLLSG 552 (699)
T ss_dssp EEECTTTC
T ss_pred EEEeccCC
Confidence 89998765
No 310
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.45 E-value=0.038 Score=52.67 Aligned_cols=124 Identities=11% Similarity=0.119 Sum_probs=79.1
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCC--CCceeEEEeeecCccccCCCCeEEEEECCC---CCEEE
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQN--GPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~---g~~l~ 290 (502)
+.|..+..||+|.+||..+. ..|.|-.++.+........ ..+..... .+..........|..+.|+|- +..|+
T Consensus 66 ~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty-~l~~~~~~~~s~I~qVlWHPl~~~ds~LV 143 (452)
T 3pbp_A 66 DDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHY-SIDEEEVGPKSSIKKVLFHPKSYRDSCIV 143 (452)
T ss_dssp CTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEE-EGGGCC--CCCCEEEEEECTTBGGGCEEE
T ss_pred CceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEE-EcCCcccCCCCceeEEEeccccCCCCeEE
Confidence 35788999999999999865 6899999985432211000 11221111 111111123578999999994 56899
Q ss_pred EEECCCeEEEEECCC---ceEEEec---------CccCCeEEEEEecCCCEEEEEe--cCCeEEEE
Q 010754 291 TGSYDGQARIWSTNG---DLKCTLS---------KHKGPIFSLKWNKKGDYLLTGS--CDKTAIVW 342 (502)
Q Consensus 291 s~~~dg~i~iwd~~~---~~~~~~~---------~~~~~v~~l~~~~~~~~l~s~~--~d~~i~~w 342 (502)
+-..|+.|++||+.. ... .+. .....|.+++|.+++-.|...+ ..|.|+-.
T Consensus 144 VLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 144 VLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred EEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 999999999999763 111 222 1225688999998776666644 67777654
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.44 E-value=0.24 Score=42.70 Aligned_cols=137 Identities=7% Similarity=-0.021 Sum_probs=80.9
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCC-------ceEEEe--cCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCC
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNG-------DLKCTL--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 346 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-------~~~~~~--~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~ 346 (502)
.++.++|+|+|.+.++ .+|.+.-.+... ..-..+ .+... -.++.|.|+|.+.++ .||.|+-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 5789999999987766 667766655432 111111 11122 478899999987777 669998887533
Q ss_pred CceE------EEE-eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCc------ceEEEe-cCCCcEEEEEEcCCCCE
Q 010754 347 EEWK------QQF-EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR------PIKTFA-GHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 347 ~~~~------~~~-~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~------~~~~~~-~h~~~i~~l~~sp~g~~ 412 (502)
.... ..+ ...-..+..|.+.|++.|.+.. |+.++-....++. ....+. ..-.....+.|.|+|.+
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l 195 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTL 195 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCE
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCcE
Confidence 2110 011 1111346788888988888888 8886543332221 111222 22234555778999887
Q ss_pred EEEEeCCC
Q 010754 413 LASCSDDV 420 (502)
Q Consensus 413 las~s~dg 420 (502)
.+.. +|
T Consensus 196 ~~v~--~g 201 (236)
T 1tl2_A 196 FGVQ--GG 201 (236)
T ss_dssp EEEE--TT
T ss_pred EEEe--CC
Confidence 7666 66
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.33 E-value=0.71 Score=43.36 Aligned_cols=230 Identities=11% Similarity=0.147 Sum_probs=125.9
Q ss_pred EEeccCCCceEEEEEcCCCCeEEEE------------eCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCc-cccCCC
Q 010754 209 TILEGHTSEVCACAWSPAGSLLASG------------SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGR-TNEKSK 275 (502)
Q Consensus 209 ~~l~~H~~~V~~~~~~p~~~~l~sg------------s~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 275 (502)
+.+.+-....-.++..|+|..++++ ..+|.|.++|..+.... ...+. .... .....-
T Consensus 43 ~~i~~~~~G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~---------~~~l~-~~g~~~~~~~f 112 (355)
T 3sre_A 43 NLVKGIDNGSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPA---------VSELE-IIGNTLDISSF 112 (355)
T ss_dssp EECTTCCSCCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCC---------EEECE-EECSSCCGGGC
T ss_pred EEeCCCCCCcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCc---------eEEEE-ccCCCCCcCce
Confidence 3344422334456677776554444 16889999998743210 01111 1110 111223
Q ss_pred CeEEEEECC--CCC-EEEEEEC---CCeEEEEECC--CceEE---EecCc-cCCeEEEEEecCCCEEEEEec--------
Q 010754 276 DVTTLDWNG--EGT-LLATGSY---DGQARIWSTN--GDLKC---TLSKH-KGPIFSLKWNKKGDYLLTGSC-------- 335 (502)
Q Consensus 276 ~v~~l~~s~--~g~-~l~s~~~---dg~i~iwd~~--~~~~~---~~~~~-~~~v~~l~~~~~~~~l~s~~~-------- 335 (502)
....+.+.+ +|. +|+++.. +..|.+|+++ +.... .+.+. -.....+.+.++|.+.++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 466676654 454 4544432 4677887754 33222 22221 235788999999987776541
Q ss_pred ---------CCeEEEEEcCCCceEEEEeeccCCeEEEEecCCC-E-EEEEeCCCeEEEEEcCCC-c--ceEEEecCCCcE
Q 010754 336 ---------DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-S-FATSSTDNMIYVCKIGEN-R--PIKTFAGHQGEV 401 (502)
Q Consensus 336 ---------d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~-~-~~~~~~d~~i~i~d~~~~-~--~~~~~~~h~~~i 401 (502)
.|.|..+|. ++. ..+...-.....++|++++ . +++-+..+.|+.|++... . ....+. ..+..
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~-~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~P 268 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDV-RVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLV 268 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCC-EEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEE
T ss_pred cchhhccCCccEEEEEEC--CeE-EEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCC
Confidence 245555554 332 2333334567899999876 3 445556889999998643 2 123342 34667
Q ss_pred EEEEEcC-CCCEEEEEeCC-CcEEEEECC--CCeeEEEecc---CCCcEEEEEEccCCC
Q 010754 402 NCVKWDP-TGSLLASCSDD-VTAKIWNMK--QDKYVHDLRE---HSKEIYTIRWSPTGS 453 (502)
Q Consensus 402 ~~l~~sp-~g~~las~s~d-g~i~iwd~~--~~~~~~~~~~---h~~~i~~v~~sp~g~ 453 (502)
-.+++++ +|++.+++..+ +.|..|+-. .+..+..++. -...|..+ |..+|.
T Consensus 269 DGi~vD~e~G~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v-~~ddG~ 326 (355)
T 3sre_A 269 DNISVDPVTGDLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVV-YAENGT 326 (355)
T ss_dssp EEEEECTTTCCEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEE-EEECSS
T ss_pred ceEEEeCCCCcEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEE-EEcCCC
Confidence 8899999 59988877644 345555543 3555555542 22334444 666776
No 313
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.20 E-value=0.93 Score=43.39 Aligned_cols=212 Identities=15% Similarity=0.202 Sum_probs=137.2
Q ss_pred EEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEE
Q 010754 220 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQAR 299 (502)
Q Consensus 220 ~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~ 299 (502)
+.-.+|..+.+|.=. ..++.|+|+++..... ...- ..+|.-=.|-.+. .|+..+ +..|+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~klk-------------s~~~-----~e~VvfWkWis~~-~l~lVT-~taVy 128 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKMK-------------AHTM-----TDDVTFWKWISLN-TVALVT-DNAVY 128 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEEE-------------EEEC-----SSCCCEEEEEETT-EEEEEC-SSEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhhc-------------ceec-----CCCceEEEecCCC-eEEEEc-CCeeE
Confidence 345677777777665 5799999999865321 1111 2346666665443 444433 57899
Q ss_pred EEECCC--ceEEEecCc----cCCeEEEEEecCCCEEEEEec-------CCeEEEEEcCCCceEEEEeeccCCeEEEEec
Q 010754 300 IWSTNG--DLKCTLSKH----KGPIFSLKWNKKGDYLLTGSC-------DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 366 (502)
Q Consensus 300 iwd~~~--~~~~~~~~~----~~~v~~l~~~~~~~~l~s~~~-------d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~ 366 (502)
-|++.+ .....+..| ...|..-..+++.++++..+- .|.+.+|..+.+ .-+.+.+|...-..+...
T Consensus 129 HWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~~ 207 (494)
T 1bpo_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKME 207 (494)
T ss_dssp EEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEECT
T ss_pred EecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEecC
Confidence 999864 455555554 346777788889998875432 468889997654 456677776655544443
Q ss_pred CC----CEEEEEeC---CCeEEEEEcCCC---c-c-----eEEEec---CCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 367 NN----VSFATSST---DNMIYVCKIGEN---R-P-----IKTFAG---HQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 367 ~~----~~~~~~~~---d~~i~i~d~~~~---~-~-----~~~~~~---h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
.+ ..|+.+.. .++++|.++... . + +..+.. -.+-..++..++.-..+..-+.-|.|++||+
T Consensus 208 g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDl 287 (494)
T 1bpo_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDL 287 (494)
T ss_dssp TCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred CCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEec
Confidence 22 22443333 378999998643 1 1 111111 1344668889998889999999999999999
Q ss_pred CCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 428 KQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 428 ~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.++.++..-+-...+|...+-+....
T Consensus 288 eTgt~i~~nrIs~~~iF~t~~~~~~~ 313 (494)
T 1bpo_A 288 ETGTCIYMNRISGETIFVTAPHEATA 313 (494)
T ss_dssp TTCCEEEEEECCSSCEEEEEEETTTT
T ss_pred ccceeeeeecccCCceEEecccCCCC
Confidence 99999987776666776666555443
No 314
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=96.13 E-value=0.43 Score=43.86 Aligned_cols=158 Identities=11% Similarity=0.070 Sum_probs=89.0
Q ss_pred EEECCCCCEEEEEECC--------------CeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe----cCCeEEE
Q 010754 280 LDWNGEGTLLATGSYD--------------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS----CDKTAIV 341 (502)
Q Consensus 280 l~~s~~g~~l~s~~~d--------------g~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~----~d~~i~~ 341 (502)
--++++|..|+-+... ..|+..++++.....+... . +..|++++++|+-.. ....|..
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~ 133 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYR 133 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEE
Confidence 3457788887777543 4677778877655444322 2 236788888888765 2345666
Q ss_pred EEcCCCceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCC--
Q 010754 342 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-- 419 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~d-- 419 (502)
.++.... ...+..+.. ..+.|..+..+.+......|++.++..+.....+. +... ..++|++.+|+-....
T Consensus 134 ~~~dGs~-~~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~g~~iy~t~~~~~ 206 (302)
T 3s25_A 134 IRIDGEE-KKKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLDDTNVYYMDVNRD 206 (302)
T ss_dssp EETTSCC-CEEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEETTEEEEEEGGGT
T ss_pred EECCCCC-eEEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeecCCEEEEEEcCCC
Confidence 6665433 333433322 34456555555554456788888887765443333 2222 3456999988876543
Q ss_pred CcEEEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 420 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 420 g~i~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
..|..-++.... ...+. +..+ ..|+|+|.
T Consensus 207 ~~I~~~~ldG~~-~~~Lt--~~~~--~~~~~~g~ 235 (302)
T 3s25_A 207 NAIVHVNINNPN-PVVLT--EANI--EHYNVYGS 235 (302)
T ss_dssp TEEEEECSSSCC-CEECS--CSCE--EEEEEETT
T ss_pred cEEEEEECCCCC-eEEEe--CCCc--ceEEECCC
Confidence 245555555433 22332 1223 23666665
No 315
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.11 E-value=0.22 Score=47.05 Aligned_cols=139 Identities=8% Similarity=0.057 Sum_probs=80.5
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCceEEEe-------cCccCCeEEEEEecC---CCEEEEEec--------CC
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL-------SKHKGPIFSLKWNKK---GDYLLTGSC--------DK 337 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~~~~~~-------~~~~~~v~~l~~~~~---~~~l~s~~~--------d~ 337 (502)
....|+|.|+|+.|+++...|.|++++.++.....+ .........|+|+|+ +..|+.+.. ..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~~ 98 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAGT 98 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCcee
Confidence 478999999999444566789999998665432111 112345689999995 455554432 23
Q ss_pred eEEEEEcCCC--c--eEEE-Eeecc------CCeEEEEecCCCEEEEEeCC--------------CeEEEEEcCCCc---
Q 010754 338 TAIVWDVKTE--E--WKQQ-FEFHS------GPTLDVDWRNNVSFATSSTD--------------NMIYVCKIGENR--- 389 (502)
Q Consensus 338 ~i~~wd~~~~--~--~~~~-~~~~~------~~v~~v~~~~~~~~~~~~~d--------------~~i~i~d~~~~~--- 389 (502)
.|..|++... . .... +.... .....+.|.+++.|..+..+ +.|.-++.....
T Consensus 99 ~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~~p~~ 178 (353)
T 2g8s_A 99 AVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGEIPDD 178 (353)
T ss_dssp EEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSCCCTT
T ss_pred EEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCCCCCC
Confidence 5666766433 1 1111 11111 12356888888877666543 467667765321
Q ss_pred ---------ceEEE-ecCCCcEEEEEEcC-CCCEEEE
Q 010754 390 ---------PIKTF-AGHQGEVNCVKWDP-TGSLLAS 415 (502)
Q Consensus 390 ---------~~~~~-~~h~~~i~~l~~sp-~g~~las 415 (502)
....+ .+| .....++|+| +|.++++
T Consensus 179 npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~ 214 (353)
T 2g8s_A 179 NPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLN 214 (353)
T ss_dssp CTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEE
T ss_pred CCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEE
Confidence 11222 233 3477899999 6665554
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=95.98 E-value=1.1 Score=42.22 Aligned_cols=141 Identities=11% Similarity=0.103 Sum_probs=80.6
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCCc-eEEEe---cCccCCeEEEEEecC---CCEEEEEec----C----CeEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTL---SKHKGPIFSLKWNKK---GDYLLTGSC----D----KTAI 340 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~~-~~~~~---~~~~~~v~~l~~~~~---~~~l~s~~~----d----~~i~ 340 (502)
....|+|.|+|++ +++..+|.|++++.++. .+..+ .........|+|+|+ +..|+++.. + +.|.
T Consensus 30 ~P~~ia~~pdG~l-~V~e~~g~I~~~d~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~ 108 (354)
T 3a9g_A 30 VPWSIAPLGGGRY-LVTERPGRLVLISPSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVI 108 (354)
T ss_dssp CEEEEEEEETTEE-EEEETTTEEEEECSSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEE
T ss_pred CCeEEEEcCCCeE-EEEeCCCEEEEEeCCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEE
Confidence 4789999999984 45566799999986554 11111 112346789999997 555555443 3 5788
Q ss_pred EEEcCCC--ce-----E-EEEee-ccCCeEEEEecCCCEEEEEeCC--------------CeEEEEEcCCC--------c
Q 010754 341 VWDVKTE--EW-----K-QQFEF-HSGPTLDVDWRNNVSFATSSTD--------------NMIYVCKIGEN--------R 389 (502)
Q Consensus 341 ~wd~~~~--~~-----~-~~~~~-~~~~v~~v~~~~~~~~~~~~~d--------------~~i~i~d~~~~--------~ 389 (502)
.|+.... .. + ..+.. .......+.|.+++.|+.+..+ +.|.-++.... .
T Consensus 109 r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~ 188 (354)
T 3a9g_A 109 RGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPN 188 (354)
T ss_dssp EEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTT
T ss_pred EEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCC
Confidence 8877544 11 1 11221 1112456788777766655332 45665655432 1
Q ss_pred ceEEEecCCCcEEEEEEcC-CCCEEEEEeC
Q 010754 390 PIKTFAGHQGEVNCVKWDP-TGSLLASCSD 418 (502)
Q Consensus 390 ~~~~~~~h~~~i~~l~~sp-~g~~las~s~ 418 (502)
....-.++. ....++|+| +|.++++-..
T Consensus 189 ~~i~a~G~r-np~Gla~d~~~g~l~v~d~g 217 (354)
T 3a9g_A 189 SPIWSYGHR-NPQGIDWHRASGVMVATEHG 217 (354)
T ss_dssp CCEEEECCS-CCCEEEECTTTCCEEEEECC
T ss_pred CcEEEEccC-CcceEEEeCCCCCEEEEecC
Confidence 111122343 356899999 6776665433
No 317
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.93 E-value=0.36 Score=44.08 Aligned_cols=145 Identities=11% Similarity=0.176 Sum_probs=78.6
Q ss_pred CCCEEEEEECC-----CeEEEEECCCce---EEEecCc---cCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCc
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDL---KCTLSKH---KGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEE 348 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~---~~~~~~~---~~~v~~l~~~~~~~~l~s~~~d-----~~i~~wd~~~~~ 348 (502)
++.+++.|+.+ ..+.+||..... ...+... ......+.+ ++..++.|+.+ ..+.+||..+.+
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCe
Confidence 56677777755 468889976544 3333221 111122222 56666676654 368899998887
Q ss_pred eEEEEeeccCC-eEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCC-
Q 010754 349 WKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDD- 419 (502)
Q Consensus 349 ~~~~~~~~~~~-v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~d- 419 (502)
+...-...... -..+....+..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 140 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~ 217 (301)
T 2vpj_A 140 WSMLGDMQTAREGAGLVVASGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDG 217 (301)
T ss_dssp EEEEEECSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EEECCCCCCCcccceEEEECCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCC
Confidence 65543221111 112222345556666543 4588899877643221 1111111222333 56777777654
Q ss_pred ----CcEEEEECCCCeeE
Q 010754 420 ----VTAKIWNMKQDKYV 433 (502)
Q Consensus 420 ----g~i~iwd~~~~~~~ 433 (502)
..+.+||+.+.+..
T Consensus 218 ~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp SSBCCCEEEEETTTTEEE
T ss_pred CcccceEEEEeCCCCcEE
Confidence 46899999887654
No 318
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.89 E-value=0.33 Score=53.49 Aligned_cols=208 Identities=14% Similarity=0.200 Sum_probs=125.3
Q ss_pred EEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEE
Q 010754 222 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 301 (502)
Q Consensus 222 ~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iw 301 (502)
-.+|..+.+|.=. ..++.|+|+.+........ ...+|.-=.|-.... |+..+ +..|.-|
T Consensus 72 IMnP~~~iiALra-g~~lQiFnl~~k~klks~~------------------~~e~VvfWkWis~~~-l~lVT-~~aVyHW 130 (1630)
T 1xi4_A 72 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT------------------MTDDVTFWKWISLNT-VALVT-DNAVYHW 130 (1630)
T ss_pred ccCCCcceEEEec-CCeEEEeehHHhhhhcccc------------------cCCCceEEEecCCCe-eEEEc-CCeEEEe
Confidence 4566666666654 5789999998765432111 123566666765443 33333 4689999
Q ss_pred ECCC--ceEEEecCc----cCCeEEEEEecCCCEEEEEe-------cCCeEEEEEcCCCceEEEEeeccCCeEEEEec--
Q 010754 302 STNG--DLKCTLSKH----KGPIFSLKWNKKGDYLLTGS-------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-- 366 (502)
Q Consensus 302 d~~~--~~~~~~~~~----~~~v~~l~~~~~~~~l~s~~-------~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~-- 366 (502)
++.+ .+...+..| ...|..-..+++.++++..+ ..|.+.+|.+..+ ..+.+.+|.+....+...
T Consensus 131 ~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~~ 209 (1630)
T 1xi4_A 131 SMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEGN 209 (1630)
T ss_pred ccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCCC
Confidence 9864 333333333 45677788888888877543 3578889987644 334455555443333221
Q ss_pred --CCCEEEEEe---CCCeEEEEEcCCC---cc------eEEEecC---CCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 367 --NNVSFATSS---TDNMIYVCKIGEN---RP------IKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 367 --~~~~~~~~~---~d~~i~i~d~~~~---~~------~~~~~~h---~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
+...|+.+. ..++++|.++... .+ +..+... .+-..++..++.-..+..-+.-|.|.++|+.|
T Consensus 210 ~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t 289 (1630)
T 1xi4_A 210 AEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLET 289 (1630)
T ss_pred CCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEeccc
Confidence 112222221 2378999998543 11 1111111 23345678888878888889999999999999
Q ss_pred CeeEEEeccCCCcEEEEEEccC
Q 010754 430 DKYVHDLREHSKEIYTIRWSPT 451 (502)
Q Consensus 430 ~~~~~~~~~h~~~i~~v~~sp~ 451 (502)
+.++..-+-...+|...+-+..
T Consensus 290 ~~~i~~~ris~~~iF~~~~~~~ 311 (1630)
T 1xi4_A 290 GTCIYMNRISGETIFVTAPHEA 311 (1630)
T ss_pred chhhhhccccCCceEEeccCCC
Confidence 9998766555556655554433
No 319
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.86 E-value=0.38 Score=43.99 Aligned_cols=146 Identities=19% Similarity=0.255 Sum_probs=78.3
Q ss_pred CCCEEEEEECCC-----eEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEecC-------CeEEEEEcCCCceE
Q 010754 285 EGTLLATGSYDG-----QARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCD-------KTAIVWDVKTEEWK 350 (502)
Q Consensus 285 ~g~~l~s~~~dg-----~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~d-------~~i~~wd~~~~~~~ 350 (502)
++.+++.|+.++ .+.+||........+.....+. .+++. -++..++.|+.+ ..+.+||+.+.++.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~ 186 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGV-VGGLLYAVGGYDVASRQCLSTVECYNATTNEWT 186 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEETTTTEECCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEE-ECCEEEEEeCCCCCCCccccEEEEEeCCCCcEE
Confidence 567777787653 5778887765544443222111 12222 245666666542 45889999888765
Q ss_pred EEEeeccC-CeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCCC--
Q 010754 351 QQFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDDV-- 420 (502)
Q Consensus 351 ~~~~~~~~-~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~dg-- 420 (502)
..-..... .-..+....+..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.++
T Consensus 187 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~i~v~GG~~~~~ 264 (302)
T 2xn4_A 187 YIAEMSTRRSGAGVGVLNNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGLLYVVGGDDGSC 264 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSS
T ss_pred ECCCCccccccccEEEECCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCEEEEECCcCCCc
Confidence 43211111 1112233355566676654 3688999887643211 1111111122222 567777777553
Q ss_pred ---cEEEEECCCCeeE
Q 010754 421 ---TAKIWNMKQDKYV 433 (502)
Q Consensus 421 ---~i~iwd~~~~~~~ 433 (502)
.+.+||..+.+..
T Consensus 265 ~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 265 NLASVEYYNPTTDKWT 280 (302)
T ss_dssp BCCCEEEEETTTTEEE
T ss_pred ccccEEEEcCCCCeEE
Confidence 4888998876643
No 320
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=95.68 E-value=0.45 Score=43.57 Aligned_cols=145 Identities=10% Similarity=0.113 Sum_probs=78.2
Q ss_pred CCCEEEEEECC----CeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecC------CeEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYD----GQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCD------KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d------~~i~~wd~~~~~~~~ 351 (502)
++.+++.|+.+ ..+.+||........+.... .....+.+ ++..++.|+.+ ..+.+||..+.++..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56677777755 67888998765544333211 11122222 56677777765 468999998887654
Q ss_pred EEeeccC-CeEEEEecCCCEEEEEeC---------CCeEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 352 QFEFHSG-PTLDVDWRNNVSFATSST---------DNMIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 352 ~~~~~~~-~v~~v~~~~~~~~~~~~~---------d~~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
.-..... .-..+....+..++.|+. -..+.+||+.+.+-... +......-..+.+ ++++++.|+.+
T Consensus 133 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~ 210 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQN 210 (306)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEE
T ss_pred CCCCcCCcceeEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCC
Confidence 3211111 111222234455555543 34588899887642211 1111111122222 56677777653
Q ss_pred -----CcEEEEECCCCeeE
Q 010754 420 -----VTAKIWNMKQDKYV 433 (502)
Q Consensus 420 -----g~i~iwd~~~~~~~ 433 (502)
..+.+||..+.+..
T Consensus 211 ~~~~~~~~~~yd~~~~~W~ 229 (306)
T 3ii7_A 211 GLGGLDNVEYYDIKLNEWK 229 (306)
T ss_dssp TTEEBCCEEEEETTTTEEE
T ss_pred CCCCCceEEEeeCCCCcEE
Confidence 35889998877643
No 321
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.62 E-value=0.68 Score=42.20 Aligned_cols=144 Identities=15% Similarity=0.170 Sum_probs=77.8
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCc---cCCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKH---KGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~---~~~v~~l~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 351 (502)
++.+++.|+.+ ..+.+||........+... ...-.++.+ ++..++.|+.+ ..+.+||+.+.++..
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 56777777654 3688889776544333221 111122222 56677777654 468999998887654
Q ss_pred EEeeccC-CeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCC----
Q 010754 352 QFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDD---- 419 (502)
Q Consensus 352 ~~~~~~~-~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~d---- 419 (502)
.-..... .-..+....+..++.|+.+ ..+.+||+.+.+-... +.........+.+ ++++++.|+.+
T Consensus 190 ~~~~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 267 (301)
T 2vpj_A 190 VTPMATKRSGAGVALLNDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSL 267 (301)
T ss_dssp ECCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSB
T ss_pred CCCCCcccccceEEEECCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcc
Confidence 3211111 1112223345556666653 4688999887653221 1111111222333 56777777655
Q ss_pred -CcEEEEECCCCee
Q 010754 420 -VTAKIWNMKQDKY 432 (502)
Q Consensus 420 -g~i~iwd~~~~~~ 432 (502)
..|.+||..+.+.
T Consensus 268 ~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 268 LSSIECYDPIIDSW 281 (301)
T ss_dssp EEEEEEEETTTTEE
T ss_pred cccEEEEcCCCCeE
Confidence 3578888877654
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.60 E-value=1.6 Score=42.70 Aligned_cols=103 Identities=13% Similarity=0.162 Sum_probs=61.5
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee--------ccCCeEEEEecC----CCEEEEEeC-------
Q 010754 316 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--------HSGPTLDVDWRN----NVSFATSST------- 376 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~--------~~~~v~~v~~~~----~~~~~~~~~------- 376 (502)
...+.|+|.|+|+++++-...+.|++++..++........ .......|+|+| ++.|.++..
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~ 106 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKST 106 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC-
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCC
Confidence 3457999999998766654445798888655554322211 134567899987 555544432
Q ss_pred ------CCeEEEEEcCCC-------cceE-EEec-CCCcEEEEEEcCCCCEEEEEeC
Q 010754 377 ------DNMIYVCKIGEN-------RPIK-TFAG-HQGEVNCVKWDPTGSLLASCSD 418 (502)
Q Consensus 377 ------d~~i~i~d~~~~-------~~~~-~~~~-h~~~i~~l~~sp~g~~las~s~ 418 (502)
...|.-|+.... +.+. .+.. .......|+|.|+|.+.++.+.
T Consensus 107 ~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 107 DKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp -CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred ccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 235655655432 1111 1221 1234789999999998777554
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.49 E-value=0.41 Score=41.26 Aligned_cols=132 Identities=9% Similarity=0.001 Sum_probs=76.8
Q ss_pred CCeEEEEEecCCCEEEEEecCCeEEEEEcCCCce------EEEEe--eccCCeEEEEecCCCEEEEEeCCCeEEEEEcCC
Q 010754 316 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW------KQQFE--FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE 387 (502)
Q Consensus 316 ~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~------~~~~~--~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~ 387 (502)
..+..++|+|+|.+.++ .+|.+.-.+..+... -..+- +-. .-..+.|.+++.|.++ .||.|+-++-.+
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~-~F~a~~fD~~G~LYav-~dG~iyr~~pP~ 116 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWN-QFQFLFFDPNGYLYAV-SKDKLYKASPPQ 116 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGG-GCSEEEECTTSCEEEE-ETTEEEEESCCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEecccccc-cceEEEECCCCCEEEe-CCCEEEEeCCCc
Confidence 36779999998885555 778777777654221 11110 011 1356777888877777 669998777543
Q ss_pred Ccce------EEE-ecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCee------EEEe-ccCCCcEEEEEEccCCC
Q 010754 388 NRPI------KTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY------VHDL-REHSKEIYTIRWSPTGS 453 (502)
Q Consensus 388 ~~~~------~~~-~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~------~~~~-~~h~~~i~~v~~sp~g~ 453 (502)
...- ..+ .+-=..+..|.+.|+|.+.+.. |+.++-+...++.. ...+ ......-.-+.|.|+|.
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~ 194 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT 194 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc
Confidence 2211 111 1112468999999999988777 77754443322110 0111 12223345577999987
No 324
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.44 E-value=0.079 Score=49.47 Aligned_cols=188 Identities=10% Similarity=-0.028 Sum_probs=97.0
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEE---ECCCCCEEEEE-ECCCeEEEEEC
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD---WNGEGTLLATG-SYDGQARIWST 303 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~---~s~~g~~l~s~-~~dg~i~iwd~ 303 (502)
.+++.++.||.|.-.|..+++..-.+.... ..++.... ...++..++.. +.||.|..++.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------------~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~ 74 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN----------------FQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNA 74 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG----------------SCCSEECCCSCTTTSSEEEEECCSTTTEEEEEET
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc----------------cCCcEEecCCccccCCcEEEEEECCCCEEEEEEC
Confidence 467888889999988888876433222110 00011100 00122333333 57888988887
Q ss_pred CCceEE-EecC----ccCCeEE---EEE-e----cCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCe-----EEEEe
Q 010754 304 NGDLKC-TLSK----HKGPIFS---LKW-N----KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-----LDVDW 365 (502)
Q Consensus 304 ~~~~~~-~~~~----~~~~v~~---l~~-~----~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v-----~~v~~ 365 (502)
...... .+.. ..+++.. ... . ..+..+++|+.+|.+...|+.+|+.+..+......- ...+.
T Consensus 75 ~~G~~~~~~~~~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~ 154 (339)
T 2be1_A 75 HQGLQKLPLSIRQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCS 154 (339)
T ss_dssp TTEEEEEEEEHHHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC----------
T ss_pred CCCcEEeeeccccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccc
Confidence 644322 1111 1122221 000 0 135678999999999999999999999886432110 11111
Q ss_pred --------cCCCEEEEEeCCCeEEEEEcCCCcceEEE-----ecCCCc--E-EEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 366 --------RNNVSFATSSTDNMIYVCKIGENRPIKTF-----AGHQGE--V-NCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 366 --------~~~~~~~~~~~d~~i~i~d~~~~~~~~~~-----~~h~~~--i-~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
..+..++.+..+..+.+.+ ++++ +..+ ...... + .+-..+.++.+ +.++.||.|.-.|..+
T Consensus 155 ~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~-~~~~~dg~v~A~d~~~ 231 (339)
T 2be1_A 155 PEEKIKLQECENMIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMC-IAPFRDKSLLASDLDF 231 (339)
T ss_dssp ----------CCEEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCC-EEEETTTEEEEECSTT
T ss_pred cccccccccCCCeEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcE-EEECCCCEEEEEECCC
Confidence 1234566666666666655 3343 2111 111000 0 00001124566 4478889999999888
Q ss_pred CeeEE
Q 010754 430 DKYVH 434 (502)
Q Consensus 430 ~~~~~ 434 (502)
|+.+.
T Consensus 232 G~~~W 236 (339)
T 2be1_A 232 RIARW 236 (339)
T ss_dssp CCEEE
T ss_pred CcEEE
Confidence 88765
No 325
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.35 E-value=1.5 Score=40.28 Aligned_cols=148 Identities=9% Similarity=0.117 Sum_probs=78.1
Q ss_pred CCCCCEEEEEEC-----C------CeEEEEECCCceEEEecCccCCeE--EEEEecCCCEEEEEecC--------CeEEE
Q 010754 283 NGEGTLLATGSY-----D------GQARIWSTNGDLKCTLSKHKGPIF--SLKWNKKGDYLLTGSCD--------KTAIV 341 (502)
Q Consensus 283 s~~g~~l~s~~~-----d------g~i~iwd~~~~~~~~~~~~~~~v~--~l~~~~~~~~l~s~~~d--------~~i~~ 341 (502)
..++.+++.|+. . ..+.+||........+.....+-. +++.. ++..++.|+.+ ..+.+
T Consensus 43 ~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~ 121 (315)
T 4asc_A 43 TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA-LNSIYVVGGREIKDGERCLDSVMC 121 (315)
T ss_dssp CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE-TTEEEEECCEESSTTCCBCCCEEE
T ss_pred EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE-CCEEEEEeCCcCCCCCcccceEEE
Confidence 357788888874 1 126778877655444432222111 12222 45666666642 46899
Q ss_pred EEcCCCceEEEEeeccC-CeEEEEecCCCEEEEEeC-C-----CeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCE
Q 010754 342 WDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSST-D-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSL 412 (502)
Q Consensus 342 wd~~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~-d-----~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~ 412 (502)
||..+.++...-..... .-.++....+..++.|+. + ..+.+||..+.+-. ..+......-.++.+ ++++
T Consensus 122 ~d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i 199 (315)
T 4asc_A 122 YDRLSFKWGESDPLPYVVYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRI 199 (315)
T ss_dssp EETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEE
T ss_pred ECCCCCcEeECCCCCCcccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEE
Confidence 99988765442211111 111222344556666665 2 45888998776421 111111111222223 5677
Q ss_pred EEEEeCCC-----cEEEEECCCCeeE
Q 010754 413 LASCSDDV-----TAKIWNMKQDKYV 433 (502)
Q Consensus 413 las~s~dg-----~i~iwd~~~~~~~ 433 (502)
++.|+.++ .+.+||..+.+..
T Consensus 200 yv~GG~~~~~~~~~~~~yd~~~~~W~ 225 (315)
T 4asc_A 200 IVAAGVTDTGLTSSAEVYSITDNKWA 225 (315)
T ss_dssp EEEEEECSSSEEEEEEEEETTTTEEE
T ss_pred EEEeccCCCCccceEEEEECCCCeEE
Confidence 77777654 4888998877644
No 326
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.18 E-value=1.2 Score=43.59 Aligned_cols=99 Identities=7% Similarity=0.131 Sum_probs=57.0
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECC-CceE--EEecC------ccCCeEEEEEecC---CCEEEEEec--------
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLK--CTLSK------HKGPIFSLKWNKK---GDYLLTGSC-------- 335 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~-~~~~--~~~~~------~~~~v~~l~~~~~---~~~l~s~~~-------- 335 (502)
..+.|+|.|+|+++++-...+.|++++.. +... ..+.. .......|+|+|+ +..|+.+..
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 47899999999977765444578888754 3222 12221 2356779999995 555555442
Q ss_pred -----CCeEEEEEcCCC--ce---EEEEe---e-ccCCeEEEEecCCCEEEEE
Q 010754 336 -----DKTAIVWDVKTE--EW---KQQFE---F-HSGPTLDVDWRNNVSFATS 374 (502)
Q Consensus 336 -----d~~i~~wd~~~~--~~---~~~~~---~-~~~~v~~v~~~~~~~~~~~ 374 (502)
...|.-|+.... .. ...+. . .......|.|.+++.|.++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~ 160 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYT 160 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEE
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEE
Confidence 235666665432 11 11111 1 1124678899877665544
No 327
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.07 E-value=5.2 Score=44.08 Aligned_cols=183 Identities=14% Similarity=0.123 Sum_probs=98.1
Q ss_pred CCceEEEEEcCC------CCeEEEEeC-CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 215 TSEVCACAWSPA------GSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 215 ~~~V~~~~~~p~------~~~l~sgs~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
.+.|.|+++.|. +.++|.|.. |++++|+++.+.+.. ....+.... ....|.-+.+ ....
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~-----------~~~~L~~~~--~p~si~l~~~-~~~~ 618 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELL-----------HKEMLGGEI--IPRSILMTTF-ESSH 618 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEE-----------EEEECCSSC--CEEEEEEEEE-TTEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeE-----------EEEECCCCC--CCcEEEEEEe-CCCc
Confidence 467999999873 368999997 999999999854321 111111100 0112333333 2345
Q ss_pred EEEEEECCCeEEEEECC---CceE---EEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeE
Q 010754 288 LLATGSYDGQARIWSTN---GDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 361 (502)
Q Consensus 288 ~l~s~~~dg~i~iwd~~---~~~~---~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~ 361 (502)
+|..|-.||.+.-+.++ +... ..+.+ ..++.-..+...+..-+.+..++...+|--+ ++.... ......+.
T Consensus 619 ~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s-~l~~~~v~ 695 (1158)
T 3ei3_A 619 YLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFS-NVNLKEVN 695 (1158)
T ss_dssp EEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEE-EBSSSCCC
T ss_pred EEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEe-ccChHHhc
Confidence 88899999988666543 2222 12222 3455555555445444444445555555533 332211 12222333
Q ss_pred E-EEecC---CCEEEEEeCCCeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCCCCEEEEE
Q 010754 362 D-VDWRN---NVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 362 ~-v~~~~---~~~~~~~~~d~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~g~~las~ 416 (502)
. ..|+. .+.++.. .++.++|..+.... .++++. -...+..++++|..+.++.+
T Consensus 696 ~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~ 754 (1158)
T 3ei3_A 696 YMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVL 754 (1158)
T ss_dssp EEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEE
T ss_pred eEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEE
Confidence 3 33432 2335443 45669998876443 334444 34578888888877765443
No 328
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=95.03 E-value=1.6 Score=39.72 Aligned_cols=146 Identities=11% Similarity=0.194 Sum_probs=78.4
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEecCC-----eEEEEEcCCCceEEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEEWKQQ 352 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~~~ 352 (502)
++.+++.|+.+ ..+.+||........+.....+ -.+++. -++..++.|+.++ .+.+||+.+.++...
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~ 139 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV 139 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEeec
Confidence 56677777754 3588889876555444322111 112222 2566777777653 578899888776543
Q ss_pred EeeccC-CeEEEEecCCCEEEEEeC-------CCeEEEEEcCCCcceE--EEecCCCcEEEEEEcCCCCEEEEEeCC---
Q 010754 353 FEFHSG-PTLDVDWRNNVSFATSST-------DNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD--- 419 (502)
Q Consensus 353 ~~~~~~-~v~~v~~~~~~~~~~~~~-------d~~i~i~d~~~~~~~~--~~~~h~~~i~~l~~sp~g~~las~s~d--- 419 (502)
-..... .-..+....+..++.|+. -..+.+||+.+.+-.. .+.........+.+ ++++++.|+.+
T Consensus 140 ~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~ 217 (302)
T 2xn4_A 140 APMNTRRSSVGVGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPL 217 (302)
T ss_dssp CCCSSCCBSCEEEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSS
T ss_pred CCCCCcccCceEEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCc
Confidence 211111 111222234555666543 2357889987764222 11111111222233 56777777654
Q ss_pred --CcEEEEECCCCeeE
Q 010754 420 --VTAKIWNMKQDKYV 433 (502)
Q Consensus 420 --g~i~iwd~~~~~~~ 433 (502)
..+.+||..+.+..
T Consensus 218 ~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 218 VRKSVEVYDPTTNAWR 233 (302)
T ss_dssp BCCCEEEEETTTTEEE
T ss_pred ccceEEEEeCCCCCEe
Confidence 36889999877654
No 329
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.96 E-value=1.1 Score=40.78 Aligned_cols=187 Identities=12% Similarity=0.120 Sum_probs=97.4
Q ss_pred CCCeEEEEeCC----CcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC------
Q 010754 226 AGSLLASGSGD----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD------ 295 (502)
Q Consensus 226 ~~~~l~sgs~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d------ 295 (502)
++.+++.|+.+ ..+.+||..+.+.. .+...... .....++.+ ++++++.|+.+
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~-----------~~~~~p~~----r~~~~~~~~--~~~iyv~GG~~~~~~~~ 117 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWY-----------SKLGPPTP----RDSLAACAA--EGKIYTSGGSEVGNSAL 117 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEE-----------EEECCSSC----CBSCEEEEE--TTEEEEECCBBTTBSCC
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEE-----------ECCCCCcc----ccceeEEEE--CCEEEEECCCCCCCcEe
Confidence 56677777654 56778887765421 11111111 111122222 56777777765
Q ss_pred CeEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEec---------CCeEEEEEcCCCceEEEEeeccC-CeEEE
Q 010754 296 GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSC---------DKTAIVWDVKTEEWKQQFEFHSG-PTLDV 363 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~---------d~~i~~wd~~~~~~~~~~~~~~~-~v~~v 363 (502)
..+.+||........+.....+ -.+++. -++..++.|+. -..+.+||+.+.++...-..... .-..+
T Consensus 118 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~ 196 (306)
T 3ii7_A 118 YLFECYDTRTESWHTKPSMLTQRCSHGMVE-ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGL 196 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEE-ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEE
T ss_pred eeEEEEeCCCCceEeCCCCcCCcceeEEEE-ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceE
Confidence 4688899876654444322111 112222 25566666654 34588999988876543211111 11122
Q ss_pred EecCCCEEEEEeCC-----CeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCe
Q 010754 364 DWRNNVSFATSSTD-----NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDD-----VTAKIWNMKQDK 431 (502)
Q Consensus 364 ~~~~~~~~~~~~~d-----~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~g~~las~s~d-----g~i~iwd~~~~~ 431 (502)
....+..++.|+.+ ..+.+||+.+.+- +..+........++.+ ++++++.|+.+ ..+.+||..+.+
T Consensus 197 ~~~~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 197 VFVKDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp EEETTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred EEECCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 22345556666543 4578899877642 2112111122233333 57778888754 468889988765
Q ss_pred e
Q 010754 432 Y 432 (502)
Q Consensus 432 ~ 432 (502)
.
T Consensus 275 W 275 (306)
T 3ii7_A 275 W 275 (306)
T ss_dssp E
T ss_pred E
Confidence 4
No 330
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.88 E-value=2.9 Score=40.12 Aligned_cols=201 Identities=8% Similarity=0.079 Sum_probs=119.8
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC-
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY- 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~- 294 (502)
..|.-=.|- +.+.|+..+. ..|.-|++.... .|. +.+..+..-....|.....+++.++++..+-
T Consensus 106 e~VvfWkWi-s~~~l~lVT~-taVyHWsi~~~s-------~P~-----kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~ 171 (494)
T 1bpo_A 106 DDVTFWKWI-SLNTVALVTD-NAVYHWSMEGES-------QPV-----KMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171 (494)
T ss_dssp SCCCEEEEE-ETTEEEEECS-SEEEEEESSSSC-------CCE-----EEEECCGGGTTCEEEEEEECTTSSEEEEEEEE
T ss_pred CCceEEEec-CCCeEEEEcC-CeeEEecccCCC-------Cch-----hheecchhcccceEEEEEECCCCCeEEEEeec
Confidence 345555565 3345555543 679999987522 111 1122222222466888888999998775542
Q ss_pred ------CCeEEEEECCCceEEEecCccCCeEEEEEecCC---CEEEEEec---CCeEEEEEcCCC---ce---EEEEee-
Q 010754 295 ------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSC---DKTAIVWDVKTE---EW---KQQFEF- 355 (502)
Q Consensus 295 ------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~s~~~---d~~i~~wd~~~~---~~---~~~~~~- 355 (502)
.|.+.+|+.+.+..+.+.+|......+...-+. +.|+.+.. .+.+.+.++... .. .+....
T Consensus 172 ~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~ 251 (494)
T 1bpo_A 172 AQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 251 (494)
T ss_dssp EETTEEEEEEEEEESTTCCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECC
T ss_pred ccCCcccceEEEeeccccccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeee
Confidence 378999999999999999998776665553221 23333333 268888888432 10 111110
Q ss_pred -----ccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 356 -----HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 356 -----~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
..+-..++..++ .+.+..-+.-|.|++||+.++.++..-+-....|..-+.+....=++.....|.|.--.++.
T Consensus 252 fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~GqVl~v~v~e 331 (494)
T 1bpo_A 252 FPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 331 (494)
T ss_dssp CCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTCEEEEEEECT
T ss_pred CCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCceEEEEEEcc
Confidence 112233344433 45577778999999999999999877776666666555554444444445666555544444
Q ss_pred C
Q 010754 430 D 430 (502)
Q Consensus 430 ~ 430 (502)
.
T Consensus 332 ~ 332 (494)
T 1bpo_A 332 E 332 (494)
T ss_dssp T
T ss_pred c
Confidence 3
No 331
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.85 E-value=5.9 Score=43.63 Aligned_cols=185 Identities=14% Similarity=0.100 Sum_probs=101.9
Q ss_pred CCeEEEEEC---CCCCEEEEEECCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEe---------cCCeEEEE
Q 010754 275 KDVTTLDWN---GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS---------CDKTAIVW 342 (502)
Q Consensus 275 ~~v~~l~~s---~~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~---------~d~~i~~w 342 (502)
..++.+... ....+|+.+..+.+ .|+.+.+..+...... .|..+...|+++. ....|++.
T Consensus 426 ~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~-------gf~~~~~TL~~~~l~~~~ivQVt~~~Irli 497 (1158)
T 3ei3_A 426 KGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELM-------GFVDDQQTFFCGNVAHQQLIQITSASVRLV 497 (1158)
T ss_dssp CEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCT-------TCCSSSCEEEEEEETTTEEEEEESSCEEEE
T ss_pred cEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccc-------cccCCCCcEEEEEcCCCeEEEEecCEEEEE
Confidence 456666543 23467777766655 5666544333322110 1122222333322 13457777
Q ss_pred EcCCCceEEEEeecc-CCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc--eEEEecCCCcEEEEEEcCC------CCEE
Q 010754 343 DVKTEEWKQQFEFHS-GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPT------GSLL 413 (502)
Q Consensus 343 d~~~~~~~~~~~~~~-~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~--~~~~~~h~~~i~~l~~sp~------g~~l 413 (502)
+...+..+..+.... ..|...+..+ ..++.+. ++.+.++.+..++. +.... -...|.|+++.|. +.++
T Consensus 498 ~~~~~~~~~~w~~p~~~~I~~As~n~-~~vvva~-g~~l~~fel~~~~L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~ 574 (1158)
T 3ei3_A 498 SQEPKALVSEWKEPQAKNISVASCNS-SQVVVAV-GRALYYLQIHPQELRQISHTE-MEHEVACLDITPLGDSNGLSPLC 574 (1158)
T ss_dssp ESSSCCEEEEECCTTCCCCCEEEECS-SEEEEEE-TTEEEEEEEETTEEEEEEEEE-CSSCEEEEECCCCSSSTTCCSEE
T ss_pred ECCCCeEEEEEECCCCCEEEEEEeCC-CEEEEEE-CCEEEEEEeeCCceeeecccC-CCCceEEEEeecCCCCcccccEE
Confidence 766555555555433 2455555444 4555554 67888888776532 22222 3567999999864 4699
Q ss_pred EEEeC-CCcEEEEECCCCeeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 414 ASCSD-DVTAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 414 as~s~-dg~i~iwd~~~~~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
|.|.. |++|+|+++.+.+.+....- ......++.+..-+. ..+|+.+-.+|.+..+.
T Consensus 575 aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~-----~~~L~igl~dG~l~~~~ 633 (1158)
T 3ei3_A 575 AIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFES-----SHYLLCALGDGALFYFG 633 (1158)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETT-----EEEEEEEETTSEEEEEE
T ss_pred EEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCC-----CcEEEEEeCCCeEEEEE
Confidence 99996 99999999988776654331 122344554443221 23566666666655443
No 332
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=94.38 E-value=2.3 Score=38.50 Aligned_cols=178 Identities=15% Similarity=0.054 Sum_probs=93.5
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
.|..++....- .++. . ||.|..|-.+. .+- .-..-...|..++.... +.+.-. ||.|+.|-......+...
T Consensus 64 ~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~--hs~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAW--ASYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETT--EEEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCC--EEEEEe-CCeEEEecCCCCCcCCCC
Confidence 46666654332 2333 4 89999997542 111 11112346777776543 344445 999999976432211111
Q ss_pred eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 010754 354 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 354 ~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
......|..++......++.. ||.|+.|-......+..-..-...|..|+...... ++. .||.|+.|-......+
T Consensus 137 ~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYTALAVK--NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp GGGGSSEEEEEECSSEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTT
T ss_pred ccCCCCeEEEEcccCEEEEEE--CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCC
Confidence 112345777766555555543 79999997665332221111134677777654433 333 4899999976543222
Q ss_pred EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 434 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
-.-......|..|+-...-. +.-+ ++.+..|-
T Consensus 212 g~p~~~~~~v~~i~~G~~h~---------~al~-~g~v~~wG 243 (282)
T 3qhy_B 212 TVPTEALSGVSAIASGEWYS---------LALK-NGKVIAWG 243 (282)
T ss_dssp CCCGGGGSSCCEEEECSSCE---------EEEE-TTEEEEES
T ss_pred CCCcccCCCceEEEcCCCEE---------EEEE-CCEEEEec
Confidence 11111123466666554433 3444 77777774
No 333
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.35 E-value=5.9 Score=41.44 Aligned_cols=210 Identities=11% Similarity=0.120 Sum_probs=121.3
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 295 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~d 295 (502)
..|.++.-..+| .|..|+.+| +..||..+..... . .......|.++.. .+| .|..|+.+
T Consensus 63 ~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~--------------~---~~~~~~~i~~i~~-~~g-~lWigt~~ 121 (758)
T 3ott_A 63 TRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQ--------------P---ETDFPTDVRTMAL-QGD-TLWLGALN 121 (758)
T ss_dssp SCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECC--------------C---SCCCCSCEEEEEE-ETT-EEEEEETT
T ss_pred ceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEEC--------------c---ccCCCceEEEEEe-cCC-cEEEEcCC
Confidence 468888777666 455666655 7789877653211 0 0001234777654 345 45566665
Q ss_pred CeEEEEECCCceEEEecC-----ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeec------cCCeEEEE
Q 010754 296 GQARIWSTNGDLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH------SGPTLDVD 364 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~-----~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~------~~~v~~v~ 364 (502)
-|..++........+.. ....|.++....++...+ ++. +-+..+|..+++... +... ...|.++.
T Consensus 122 -Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~-~Gl~~~~~~~~~~~~-~~~~~~~~~~~~~i~~i~ 197 (758)
T 3ott_A 122 -GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTY-NGLCRYIPSNGKFEG-IPLPVHSSQSNLFVNSLL 197 (758)
T ss_dssp -EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EET-TEEEEEETTTTEEEE-ECCCCCTTCSSCCEEEEE
T ss_pred -cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeC-CCHhhCccCCCceEE-ecCCCccccccceeEEEE
Confidence 57888876555444411 134688888877776554 444 458888877665432 2211 12377777
Q ss_pred ecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEec------
Q 010754 365 WRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR------ 437 (502)
Q Consensus 365 ~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~------ 437 (502)
... ++.+..++. +.+..++..+++...........|.++....+|.+.+. +.+ -|.+++..+++......
T Consensus 198 ~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~-Gl~~~~~~~~~~~~~~~~~~~~~ 274 (758)
T 3ott_A 198 EDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDN-GLYVYHNDTTPLQHIIHDSRNIQ 274 (758)
T ss_dssp EETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETT-EEEEECCTTSCCEEECCCTTCTT
T ss_pred EECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCC-ceeEEecCCCcEEEEEcCCCCcC
Confidence 654 454555553 56888888766432211112345888988888876654 444 48888877655432211
Q ss_pred -cCCCcEEEEEEccCCC
Q 010754 438 -EHSKEIYTIRWSPTGS 453 (502)
Q Consensus 438 -~h~~~i~~v~~sp~g~ 453 (502)
-....|.++.-..+|.
T Consensus 275 ~l~~~~i~~i~~D~~g~ 291 (758)
T 3ott_A 275 SLTNNIIWNIFADQEHN 291 (758)
T ss_dssp SCSCSCEEEEEECTTCC
T ss_pred cCCcCeEEEEEEcCCCC
Confidence 1123478877766664
No 334
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.34 E-value=6 Score=41.42 Aligned_cols=187 Identities=11% Similarity=0.073 Sum_probs=109.6
Q ss_pred ceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCC
Q 010754 217 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 296 (502)
Q Consensus 217 ~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg 296 (502)
.|.++.. .+| .|..|+.+ -+..++..+.+.. ..... ........|.++....+|.+.+ |+.+
T Consensus 104 ~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~-----------~~~~~--~~~l~~~~i~~i~~d~~g~lWi-gt~~- 165 (758)
T 3ott_A 104 DVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT-----------SFDTR--RNGLPNNTIYSIIRTKDNQIYV-GTYN- 165 (758)
T ss_dssp CEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE-----------EECHH--HHCCSCSCEEEEEECTTCCEEE-EETT-
T ss_pred eEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE-----------EeccC--CCCcCCCeEEEEEEcCCCCEEE-EeCC-
Confidence 4666654 345 45556665 5777887654321 00000 0011234688888888887665 4544
Q ss_pred eEEEEECCCceEEEecCc------cCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEeeccCCeEEEEecCCCE
Q 010754 297 QARIWSTNGDLKCTLSKH------KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 370 (502)
Q Consensus 297 ~i~iwd~~~~~~~~~~~~------~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~v~~v~~~~~~~ 370 (502)
-|..++........+... ...|.++...+++..|..|+. +-+..+|..+++...........|.++....++.
T Consensus 166 Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~ 244 (758)
T 3ott_A 166 GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGD 244 (758)
T ss_dssp EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCC
T ss_pred CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCC
Confidence 477788765444333211 224888888877776666664 5688899877654332222334577777777777
Q ss_pred EEEEeCCCeEEEEEcCCCcceEEEec--------CCCcEEEEEEcCCCCEEEEEeCCCcEEEEE
Q 010754 371 FATSSTDNMIYVCKIGENRPIKTFAG--------HQGEVNCVKWDPTGSLLASCSDDVTAKIWN 426 (502)
Q Consensus 371 ~~~~~~d~~i~i~d~~~~~~~~~~~~--------h~~~i~~l~~sp~g~~las~s~dg~i~iwd 426 (502)
+..|+. +-+.+++..+... ..+.. ....|.++..+.+|.+-+ |+..| +.++.
T Consensus 245 lWigT~-~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWi-GT~~G-l~~~~ 304 (758)
T 3ott_A 245 LLAGTD-NGLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIWL-GTDYG-ISLSR 304 (758)
T ss_dssp EEEEET-TEEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEEE-EESSS-EEEEC
T ss_pred EEEEeC-CceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEEE-EeCCc-ccccc
Confidence 777774 5678888766543 22321 124589999888887554 44556 54443
No 335
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.25 E-value=3.2 Score=38.00 Aligned_cols=147 Identities=10% Similarity=0.133 Sum_probs=77.1
Q ss_pred CCCEEEEEECC-------CeEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEec------CCeEEEEEcCCCce
Q 010754 285 EGTLLATGSYD-------GQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSC------DKTAIVWDVKTEEW 349 (502)
Q Consensus 285 ~g~~l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~------d~~i~~wd~~~~~~ 349 (502)
++.+++.|+.+ ..+.+||........+.....+. .+++. .++..++.|+. -..+.+||..+.++
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDW 187 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETTTTEE
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCCCCEE
Confidence 56777777754 35778887765554443222211 11222 35566666654 24589999988876
Q ss_pred EEEEeeccC-CeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCEEEEEeCC--
Q 010754 350 KQQFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD-- 419 (502)
Q Consensus 350 ~~~~~~~~~-~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~las~s~d-- 419 (502)
...-..... .-..+....+..++.|+.+ ..+.+||+.+.+-. ..+.........+.+ ++++++.|+.+
T Consensus 188 ~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~ 265 (318)
T 2woz_A 188 KDLAPMKTPRSMFGVAIHKGKIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGSLYAIGGFAMI 265 (318)
T ss_dssp EEECCCSSCCBSCEEEEETTEEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTEEEEECCBCCB
T ss_pred EECCCCCCCcccceEEEECCEEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCEEEEECCeecc
Confidence 543211111 1112233455666676543 34678888776421 112111111222222 46677777643
Q ss_pred ------------CcEEEEECCCCeeEE
Q 010754 420 ------------VTAKIWNMKQDKYVH 434 (502)
Q Consensus 420 ------------g~i~iwd~~~~~~~~ 434 (502)
..+.+||..+.+...
T Consensus 266 ~~~~~~~~~~~~~~v~~yd~~~~~W~~ 292 (318)
T 2woz_A 266 QLESKEFAPTEVNDIWKYEDDKKEWAG 292 (318)
T ss_dssp C----CCBCCBCCCEEEEETTTTEEEE
T ss_pred CCCCceeccceeeeEEEEeCCCCEehh
Confidence 357788887766543
No 336
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.25 E-value=3.2 Score=37.94 Aligned_cols=153 Identities=8% Similarity=0.030 Sum_probs=86.4
Q ss_pred CCCCEEEEEE--CCCeEEEEECCCceEEEecCccCCeEEEEEecCCCEEEEEecC--------------CeEEEEEcCCC
Q 010754 284 GEGTLLATGS--YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD--------------KTAIVWDVKTE 347 (502)
Q Consensus 284 ~~g~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d--------------~~i~~wd~~~~ 347 (502)
.+|..|+... .++.|...+.++.....+.... +--+++++.+|+-+... ..|+..++..+
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~~----~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSNDT----AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEEE----EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCCc----eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 4566666664 2567777777776555554322 34558889988876543 36777777766
Q ss_pred ceEEEEeeccCCeEEEEecCCCEEEEEe----CCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeC-CCcE
Q 010754 348 EWKQQFEFHSGPTLDVDWRNNVSFATSS----TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTA 422 (502)
Q Consensus 348 ~~~~~~~~~~~~v~~v~~~~~~~~~~~~----~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~-dg~i 422 (502)
+... +. ......+... +..++-.. ....|+..++.... ...+..+.. ..|+|+++.|+-.+. ...|
T Consensus 99 ~~~~-l~--~~~~~~~s~~-g~~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~I 169 (302)
T 3s25_A 99 GSTV-LD--PDPCIYASLI-GNYIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQL 169 (302)
T ss_dssp CCEE-EE--CSCEEEEEEE-TTEEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCE
T ss_pred cceE-ee--cCCccEEEEe-CCEEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceE
Confidence 5332 22 2222333333 33444333 34566666766443 344444432 456788888886665 5678
Q ss_pred EEEECCCCeeEEEeccCCCcEEEEEEccCCC
Q 010754 423 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 453 (502)
Q Consensus 423 ~iwd~~~~~~~~~~~~h~~~i~~v~~sp~g~ 453 (502)
.+-++..+.....+. +... ..++|+|.
T Consensus 170 y~~~l~g~~~~~l~~---~~~~-~~~~P~g~ 196 (302)
T 3s25_A 170 YRYDTASQSEALFYD---CNCY-KPVVLDDT 196 (302)
T ss_dssp EEEETTTTEEEEEEC---SCEE-EEEEEETT
T ss_pred EEEECCCCCEEEEeC---CCcc-ceeeecCC
Confidence 888877665433333 2222 23557765
No 337
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.12 E-value=1.1 Score=40.91 Aligned_cols=144 Identities=12% Similarity=0.124 Sum_probs=76.9
Q ss_pred CCCEEEEEECC-----CeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCCceEE
Q 010754 285 EGTLLATGSYD-----GQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQ 351 (502)
Q Consensus 285 ~g~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d-----~~i~~wd~~~~~~~~ 351 (502)
++++++.|+.+ ..+.+||........+.... ..-..+.+ ++..++.|+.+ ..+.+||+.+.++..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 56677777643 46788888765544433211 11122222 55666677654 468999998876654
Q ss_pred EEeeccC-CeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcceE--EEecCCCcEEEEEEcCCCCEEEEEeCC----
Q 010754 352 QFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD---- 419 (502)
Q Consensus 352 ~~~~~~~-~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~~--~~~~h~~~i~~l~~sp~g~~las~s~d---- 419 (502)
.-..... .-..+....+..++.|+.+ ..+.+||+.+.+-.. .+.........+.+ ++++++.|+.+
T Consensus 199 ~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 276 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVLHNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTF 276 (308)
T ss_dssp CCCCSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCB
T ss_pred CCCCCCccccceEEEECCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcc
Confidence 3111110 1112222355566666654 468899988764221 11111111222222 56777777654
Q ss_pred -CcEEEEECCCCee
Q 010754 420 -VTAKIWNMKQDKY 432 (502)
Q Consensus 420 -g~i~iwd~~~~~~ 432 (502)
..+.+||..+.+.
T Consensus 277 ~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 277 LDSVECYDPDTDTW 290 (308)
T ss_dssp CCEEEEEETTTTEE
T ss_pred cceEEEEcCCCCEE
Confidence 3577888877654
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.98 E-value=3.6 Score=37.58 Aligned_cols=146 Identities=12% Similarity=0.120 Sum_probs=76.7
Q ss_pred CCCEEEEEECC--------CeEEEEECCCceEEEecCccCCe--EEEEEecCCCEEEEEec-C-----CeEEEEEcCCCc
Q 010754 285 EGTLLATGSYD--------GQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSC-D-----KTAIVWDVKTEE 348 (502)
Q Consensus 285 ~g~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~v--~~l~~~~~~~~l~s~~~-d-----~~i~~wd~~~~~ 348 (502)
++.+++.|+.+ ..+.+||.....-..+.....+. .+++. -+++.++.|+. + ..+.+||..+.+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~ 176 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDPKKFE 176 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE-ECCEEEEEeCCCCCCcccceEEEEeCCCCe
Confidence 56677777632 45888998765544433221111 12222 35566667765 2 468999998876
Q ss_pred eEEEEeeccC-CeEEEEecCCCEEEEEeCCC-----eEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 349 WKQQFEFHSG-PTLDVDWRNNVSFATSSTDN-----MIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 349 ~~~~~~~~~~-~v~~v~~~~~~~~~~~~~d~-----~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
+...-..... .-..+....+..++.|+.++ .+.+||+.+.+-... +.........+.+ ++++++.|+.++
T Consensus 177 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~ 254 (315)
T 4asc_A 177 WKELAPMQTARSLFGATVHDGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGGFAT 254 (315)
T ss_dssp EEECCCCSSCCBSCEEEEETTEEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEEE
T ss_pred EEECCCCCCchhceEEEEECCEEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECCccc
Confidence 6543211111 11122233556677776544 578888877642221 1111111222333 567777776532
Q ss_pred --------------cEEEEECCCCeeE
Q 010754 421 --------------TAKIWNMKQDKYV 433 (502)
Q Consensus 421 --------------~i~iwd~~~~~~~ 433 (502)
.|.+||..+.+..
T Consensus 255 ~~~~~~~~~~~~~~~v~~yd~~~~~W~ 281 (315)
T 4asc_A 255 LETESGELVPTELNDIWRYNEEEKKWE 281 (315)
T ss_dssp EECTTSCEEEEEEEEEEEEETTTTEEE
T ss_pred cCcCCccccccccCcEEEecCCCChhh
Confidence 3677887776543
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=93.79 E-value=4.1 Score=37.50 Aligned_cols=201 Identities=8% Similarity=0.069 Sum_probs=117.5
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEEC-
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY- 294 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~- 294 (502)
..|.-=.|-. .+.|+..+. ..|.-|++.... .|. +.+..+..-....|.....+++.+.++..+-
T Consensus 107 e~VvfWkWis-~~~L~lVT~-taVyHWs~~~~s-------~P~-----kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~ 172 (365)
T 2xzh_A 107 DDVTFWKWIS-LNTVALVTD-NAVYHWSMEGES-------QPV-----KMFDRHSSLAGCQIINYRTDAKQKWLLLTGIS 172 (365)
T ss_dssp SCEEEEEECS-SSEEEEEES-SEEEEEESSTTC-------CCE-----EEEECCGGGTTCEEEEEEECTTSCEEEEEEEE
T ss_pred CccEEEEecC-CCeEEEEcC-CcEEEEcccCCC-------CCc-----eeeecchhcccceEEEEEECCCCCEEEEEeEe
Confidence 4555556663 445555544 579999987522 111 1122222222466888888999997766542
Q ss_pred ------CCeEEEEECCCceEEEecCccCCeEEEEEecC--C-CEEEEEec---CCeEEEEEcCCC---ce---EEEEe--
Q 010754 295 ------DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKK--G-DYLLTGSC---DKTAIVWDVKTE---EW---KQQFE-- 354 (502)
Q Consensus 295 ------dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~~~--~-~~l~s~~~---d~~i~~wd~~~~---~~---~~~~~-- 354 (502)
.|.+.+|+.+.+..+.+.+|......+.+.-+ . +.|+.+.. .+.+.+.++... .. .+...
T Consensus 173 ~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~ 252 (365)
T 2xzh_A 173 AQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 252 (365)
T ss_dssp EETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEEC
T ss_pred ccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceee
Confidence 37899999999999999998776555544321 1 23333332 258888887432 10 11111
Q ss_pred -e---ccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 355 -F---HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 355 -~---~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
. ..+-..++..++ .+.+..-+.-|.|++||+.++.++..-+-....|..-+.+....=++.....|.|.--.++.
T Consensus 253 fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ta~~~~~~Gi~~Vnr~GqVl~v~v~~ 332 (365)
T 2xzh_A 253 FPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKGQVLSVCVEE 332 (365)
T ss_dssp CCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEEGGGTEEEEEETTCEEEEEEECT
T ss_pred CCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEEecccCCCCcEEEEcCCCEEEEEEECc
Confidence 0 112233344333 45577778999999999999999887776666665555444433344444566555444443
Q ss_pred C
Q 010754 430 D 430 (502)
Q Consensus 430 ~ 430 (502)
.
T Consensus 333 ~ 333 (365)
T 2xzh_A 333 E 333 (365)
T ss_dssp T
T ss_pred c
Confidence 3
No 340
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=93.57 E-value=4.7 Score=37.57 Aligned_cols=198 Identities=13% Similarity=0.144 Sum_probs=103.7
Q ss_pred CCCceEEEEEcCC----CCeEEEEe--CCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCC
Q 010754 214 HTSEVCACAWSPA----GSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 287 (502)
Q Consensus 214 H~~~V~~~~~~p~----~~~l~sgs--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~ 287 (502)
..+....|+++|+ +.+.++-+ .+..|.-|.+..+..... ....... .+..+.. ...| ....|.|.|||.
T Consensus 78 g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~-~~~~~~~-i~~~~p~-~~~H--~g~~l~fgpDG~ 152 (347)
T 3das_A 78 GEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGE-QLGAPDT-VFRGIPK-GVIH--NGGRIAFGPDKM 152 (347)
T ss_dssp TTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTC-CBCCCEE-EEEEECC-CSSC--CCCCEEECTTSC
T ss_pred CCCCceeeEeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccc-cCCCcEE-EEEcCCC-CCCc--cCccccCCCCCC
Confidence 3466789999995 44444322 344555565554221000 0001111 1122221 1223 356799999998
Q ss_pred EEEEEEC-------------CCeEEEEECCCce---------EEEecCccCCeEEEEEecCCCEEEEE-ecCCeEEEEEc
Q 010754 288 LLATGSY-------------DGQARIWSTNGDL---------KCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDV 344 (502)
Q Consensus 288 ~l~s~~~-------------dg~i~iwd~~~~~---------~~~~~~~~~~v~~l~~~~~~~~l~s~-~~d~~i~~wd~ 344 (502)
+.++.+. .|.|.-.+.++.. .....+|.. ...++|+|+|..+++= +.|+.-.|--+
T Consensus 153 Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RN-p~Gla~dp~G~L~~~d~g~~~~deln~i 231 (347)
T 3das_A 153 LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRN-VQGLAWDDKQRLFASEFGQDTWDELNAI 231 (347)
T ss_dssp EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSB-CCEEEECTTCCEEEEECCSSSCEEEEEE
T ss_pred EEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCC-cceEEECCCCCEEEEecCCCCCceeeEE
Confidence 7777542 3555555655431 122235544 4689999987755542 22322222222
Q ss_pred CCCc------------------eEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcc----eEEEecCCCcEE
Q 010754 345 KTEE------------------WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP----IKTFAGHQGEVN 402 (502)
Q Consensus 345 ~~~~------------------~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~----~~~~~~h~~~i~ 402 (502)
..+. ++..+..+......+.|..+..|+..-..+.|....+..... ...+.+....+.
T Consensus 232 ~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~G~~~~~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~ 311 (347)
T 3das_A 232 KPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPSGIAYAEGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLR 311 (347)
T ss_dssp CTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEEEEEEETTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEE
T ss_pred cCCCEecCCcccCCCCCccccCCcEecCCCCCCCcceEEEcCceeeccccCCEEEEEEecCCceecceEEeecCCCCCcc
Confidence 2221 122222122355677777666677666667777777665432 223334446799
Q ss_pred EEEEcCCCCEEEEEe
Q 010754 403 CVKWDPTGSLLASCS 417 (502)
Q Consensus 403 ~l~~sp~g~~las~s 417 (502)
.|+..|||.++++.+
T Consensus 312 dv~~~pDG~lyv~td 326 (347)
T 3das_A 312 TVAPAGGDKLWLVTS 326 (347)
T ss_dssp EEEEEETTEEEEEEC
T ss_pred EEEECCCCcEEEEEc
Confidence 999999998766654
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.23 E-value=4.8 Score=36.62 Aligned_cols=145 Identities=12% Similarity=0.133 Sum_probs=77.2
Q ss_pred CCCEEEEEEC----C-----CeEEEEECCCceEEEecCcc---CCeEEEEEecCCCEEEEEecC-----CeEEEEEcCCC
Q 010754 285 EGTLLATGSY----D-----GQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTE 347 (502)
Q Consensus 285 ~g~~l~s~~~----d-----g~i~iwd~~~~~~~~~~~~~---~~v~~l~~~~~~~~l~s~~~d-----~~i~~wd~~~~ 347 (502)
++.+++.|+. + ..+.+||........+.... .....+.+ ++..++.|+.+ ..+.+||..+.
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCC
Confidence 5667777765 2 46788887765544443211 11122222 55666666643 46889999887
Q ss_pred ceEEEEeeccC-CeEEEEecCCCEEEEEeCC-----CeEEEEEcCCCcce--EEEecCCCcEEEEEEcCCCCEEEEEeCC
Q 010754 348 EWKQQFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDD 419 (502)
Q Consensus 348 ~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~d-----~~i~i~d~~~~~~~--~~~~~h~~~i~~l~~sp~g~~las~s~d 419 (502)
++...-..... .-..+....+..++.|+.+ ..+.+||+.+.+-. ..+.........+.+ ++++++.|+.+
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 225 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVLNRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYD 225 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eEeECCCCCccccceEEEEECCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCC
Confidence 66543211111 0112222345556666543 45888888766421 111111111222333 56777777654
Q ss_pred -----CcEEEEECCCCeeE
Q 010754 420 -----VTAKIWNMKQDKYV 433 (502)
Q Consensus 420 -----g~i~iwd~~~~~~~ 433 (502)
..+.+||+.+.+..
T Consensus 226 ~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 226 GQDQLNSVERYDVETETWT 244 (308)
T ss_dssp SSSBCCCEEEEETTTTEEE
T ss_pred CCCccceEEEEeCCCCcEE
Confidence 46899999887654
No 342
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.23 E-value=3.9 Score=37.42 Aligned_cols=148 Identities=9% Similarity=0.143 Sum_probs=76.1
Q ss_pred CCCCCEEEEEEC----CC-------eEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEecC-------CeEEEE
Q 010754 283 NGEGTLLATGSY----DG-------QARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCD-------KTAIVW 342 (502)
Q Consensus 283 s~~g~~l~s~~~----dg-------~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d-------~~i~~w 342 (502)
..++.+++.|+. ++ .+.+||........+.....+ -.+++.. ++..++.|+.+ ..+.+|
T Consensus 54 ~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~y 132 (318)
T 2woz_A 54 TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV-DDKIYVVAGKDLQTEASLDSVLCY 132 (318)
T ss_dssp CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE-TTEEEEEEEEBTTTCCEEEEEEEE
T ss_pred EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE-CCEEEEEcCccCCCCcccceEEEE
Confidence 456778888873 12 167788776555444322211 1122222 45666677654 358889
Q ss_pred EcCCCceEEEEeeccC-CeEEEEecCCCEEEEEeC------CCeEEEEEcCCCcceEE--EecCCCcEEEEEEcCCCCEE
Q 010754 343 DVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSST------DNMIYVCKIGENRPIKT--FAGHQGEVNCVKWDPTGSLL 413 (502)
Q Consensus 343 d~~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~~~------d~~i~i~d~~~~~~~~~--~~~h~~~i~~l~~sp~g~~l 413 (502)
|..+.++...-..... .-..+....+..++.|+. -..+.+||+.+.+-... +........++.+ +++++
T Consensus 133 d~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iy 210 (318)
T 2woz_A 133 DPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIV 210 (318)
T ss_dssp ETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEE
T ss_pred eCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEE
Confidence 9988776543211100 001122244555666653 23588899887642211 1111111222222 56777
Q ss_pred EEEeCC-----CcEEEEECCCCeeE
Q 010754 414 ASCSDD-----VTAKIWNMKQDKYV 433 (502)
Q Consensus 414 as~s~d-----g~i~iwd~~~~~~~ 433 (502)
+.|+.+ ..+.+||..+.+..
T Consensus 211 v~GG~~~~~~~~~~~~yd~~~~~W~ 235 (318)
T 2woz_A 211 IAGGVTEDGLSASVEAFDLKTNKWE 235 (318)
T ss_dssp EEEEEETTEEEEEEEEEETTTCCEE
T ss_pred EEcCcCCCCccceEEEEECCCCeEE
Confidence 777653 34778998776543
No 343
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.16 E-value=0.83 Score=42.87 Aligned_cols=100 Identities=14% Similarity=0.211 Sum_probs=56.2
Q ss_pred CCCEEEEEEC-C---------CeEEEEECCCceEEEecCcc-CCe--EEEEEecCCCEEEEEecC---------------
Q 010754 285 EGTLLATGSY-D---------GQARIWSTNGDLKCTLSKHK-GPI--FSLKWNKKGDYLLTGSCD--------------- 336 (502)
Q Consensus 285 ~g~~l~s~~~-d---------g~i~iwd~~~~~~~~~~~~~-~~v--~~l~~~~~~~~l~s~~~d--------------- 336 (502)
++++++.|+. + ..+.+||........+.... .+. .+++. .+++.++.|+.+
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~~~~ 143 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSHAPMGMAGHVTFV-HNGKAYVTGGVNQNIFNGYFEDLNEAG 143 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCCCSSCCSSEEEEE-ETTEEEEEECCCHHHHHHHHHHHHHHT
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCCCCcccccceEEE-ECCEEEEEeCcCCCcCcccccchhhcC
Confidence 5667777765 2 46888898766554443322 111 12222 456777777754
Q ss_pred ------------------------CeEEEEEcCCCceEEEEeeccC-Ce-EEEEecCCCEEEEEeC------CCeEEEEE
Q 010754 337 ------------------------KTAIVWDVKTEEWKQQFEFHSG-PT-LDVDWRNNVSFATSST------DNMIYVCK 384 (502)
Q Consensus 337 ------------------------~~i~~wd~~~~~~~~~~~~~~~-~v-~~v~~~~~~~~~~~~~------d~~i~i~d 384 (502)
..+.+||..+.++...-..... .. .++....+..++.|+. ...+.+||
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d 223 (357)
T 2uvk_A 144 KDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELD 223 (357)
T ss_dssp TCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEE
T ss_pred CcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEE
Confidence 5799999988876654322211 11 2334445555666553 34567777
Q ss_pred c
Q 010754 385 I 385 (502)
Q Consensus 385 ~ 385 (502)
+
T Consensus 224 ~ 224 (357)
T 2uvk_A 224 F 224 (357)
T ss_dssp C
T ss_pred e
Confidence 6
No 344
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.14 E-value=1.9 Score=40.24 Aligned_cols=138 Identities=7% Similarity=-0.038 Sum_probs=65.3
Q ss_pred CeEEEEECCCceEEEecCccC--Ce-EEEEEecCCCEEEEEec------CCeEEEEEc--CCCceEEEEeec-cCC--eE
Q 010754 296 GQARIWSTNGDLKCTLSKHKG--PI-FSLKWNKKGDYLLTGSC------DKTAIVWDV--KTEEWKQQFEFH-SGP--TL 361 (502)
Q Consensus 296 g~i~iwd~~~~~~~~~~~~~~--~v-~~l~~~~~~~~l~s~~~------d~~i~~wd~--~~~~~~~~~~~~-~~~--v~ 361 (502)
..+.+||........+..... .- .+++.. ++..++.|+. ...+.+||+ .+.++...-... ... -.
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~-~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNK-GDKTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEE-TTEEEEECCEEETTEECCCEEEEECC---CEEEECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEE-CCEEEEEeeecCCCcccCceEEEEecCCCCcEEecCCCCCCcccccc
Confidence 478899987654443322111 11 233332 4556666653 345777877 555544321111 101 11
Q ss_pred EEEecCCCEEEEEeCC----------------------CeEEEEEcCCCc--ceEEEecCCCcEEEEEEcCCCCEEEEEe
Q 010754 362 DVDWRNNVSFATSSTD----------------------NMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 362 ~v~~~~~~~~~~~~~d----------------------~~i~i~d~~~~~--~~~~~~~h~~~i~~l~~sp~g~~las~s 417 (502)
.+....+..++.|+.+ ..+.+||+.+.+ .+..+......-.++. .++++++.|+
T Consensus 247 ~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~GG 324 (357)
T 2uvk_A 247 FAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLIIGG 324 (357)
T ss_dssp EEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEEEE
T ss_pred eEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEEee
Confidence 2333455566666532 246788887654 2333322222222232 3677888888
Q ss_pred CCC------cEEEEECCCCeeEEEe
Q 010754 418 DDV------TAKIWNMKQDKYVHDL 436 (502)
Q Consensus 418 ~dg------~i~iwd~~~~~~~~~~ 436 (502)
.++ .|.++++++++.+...
T Consensus 325 ~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 325 ETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp ECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eCCCCCEeeeEEEEEEcCcEeEeee
Confidence 643 3555688877766543
No 345
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.05 E-value=0.23 Score=46.31 Aligned_cols=140 Identities=13% Similarity=0.153 Sum_probs=83.3
Q ss_pred CEEEEEECCCeEEEEECC-CceEEEecCc-cCCeEEEEEe--cCCCEEEEE--ecCCeEEEEEcCCCceEEEEeec----
Q 010754 287 TLLATGSYDGQARIWSTN-GDLKCTLSKH-KGPIFSLKWN--KKGDYLLTG--SCDKTAIVWDVKTEEWKQQFEFH---- 356 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~-~~~~~~~~~~-~~~v~~l~~~--~~~~~l~s~--~~d~~i~~wd~~~~~~~~~~~~~---- 356 (502)
.++++++.||.|.-+|.. |+....+... ..++....-. +.+..++.+ +.||.|..+|..+|.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 478899999999999965 6666666543 1233332111 112234443 58999999999888655444321
Q ss_pred cCCeEE-----E----EecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCC--Cc-----EEEEEEc-----CCCCEEEE
Q 010754 357 SGPTLD-----V----DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ--GE-----VNCVKWD-----PTGSLLAS 415 (502)
Q Consensus 357 ~~~v~~-----v----~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~--~~-----i~~l~~s-----p~g~~las 415 (502)
..++.. + .-+.++.+++++.++.+...|+.+|+.+..+.... +. ..|.... ..+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 122221 0 00156778999999999999999999998886432 11 1111111 12356777
Q ss_pred EeCCCcEEEEE
Q 010754 416 CSDDVTAKIWN 426 (502)
Q Consensus 416 ~s~dg~i~iwd 426 (502)
++.+..+.+.+
T Consensus 171 g~~~y~v~~~~ 181 (339)
T 2be1_A 171 GKTIFELGIHS 181 (339)
T ss_dssp EEEEEECEECC
T ss_pred ecceEEEEEEC
Confidence 77666666655
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.76 E-value=3.1 Score=43.15 Aligned_cols=106 Identities=11% Similarity=0.115 Sum_probs=62.1
Q ss_pred CCCCEEEEEECCC--eEEEEECCCceEEEecC------ccCCeEEEEEecC-CCEEEEEec--C-----CeEEEEEcCCC
Q 010754 284 GEGTLLATGSYDG--QARIWSTNGDLKCTLSK------HKGPIFSLKWNKK-GDYLLTGSC--D-----KTAIVWDVKTE 347 (502)
Q Consensus 284 ~~g~~l~s~~~dg--~i~iwd~~~~~~~~~~~------~~~~v~~l~~~~~-~~~l~s~~~--d-----~~i~~wd~~~~ 347 (502)
.++.+++.|+.++ .+.+||........+.. ......++.+..+ +..++.|+. + +.+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 3788888888664 68999987765554432 1122233555655 566667765 2 46899999888
Q ss_pred c------eEEEEee--cc-CCeEEEEecCCCEEEEEeC--------CCeEEEEEcCCCc
Q 010754 348 E------WKQQFEF--HS-GPTLDVDWRNNVSFATSST--------DNMIYVCKIGENR 389 (502)
Q Consensus 348 ~------~~~~~~~--~~-~~v~~v~~~~~~~~~~~~~--------d~~i~i~d~~~~~ 389 (502)
. +...... .. .....+.+.++..++.|+. ...+.+||+.+.+
T Consensus 579 ~w~~~~~W~~~~~~p~~~R~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~ 637 (695)
T 2zwa_A 579 NATEPITVIKKLQHPLFQRYGSQIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSET 637 (695)
T ss_dssp CSSCCEEEEEEEECGGGCCBSCEEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTE
T ss_pred ccccceEEEEcCCCCCCCcccceEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCe
Confidence 7 3322221 11 1122233332566666663 3458899988764
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.45 E-value=9.7 Score=39.39 Aligned_cols=197 Identities=11% Similarity=0.073 Sum_probs=102.6
Q ss_pred CCCCeEEEEeCC----CcEEEEecCCCCccCCCCCCCceeEEEe-eec-CccccCCCCeEEEEECCCCCEEEEEECC---
Q 010754 225 PAGSLLASGSGD----STARIWTIADGTSNGGAQNGPLNVLVLK-HVK-GRTNEKSKDVTTLDWNGEGTLLATGSYD--- 295 (502)
Q Consensus 225 p~~~~l~sgs~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~v~~l~~s~~g~~l~s~~~d--- 295 (502)
.++.+++.|+.+ ..+.+||..+.+... +. ... .........-.++.+..++.+++.|+.+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~-----------~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~ 464 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDM-----------KNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPH 464 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEE-----------EECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTT
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEE-----------eccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCC
Confidence 456777777753 357778877654211 11 000 0001111122333333267788888754
Q ss_pred ---CeEEEEECCCceEEEecCccCC--eEEEEEecCCCEEEEEecCC--eEEEEEcCCCceEEEEee-----ccCCeEEE
Q 010754 296 ---GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQFEF-----HSGPTLDV 363 (502)
Q Consensus 296 ---g~i~iwd~~~~~~~~~~~~~~~--v~~l~~~~~~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~-----~~~~v~~v 363 (502)
..+.+||..............+ -.+++...++..++.|+.++ .+.+||..+..+...-.. .......+
T Consensus 465 ~~~~dv~~yd~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~ 544 (695)
T 2zwa_A 465 QGLSDNWIFDMKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGL 544 (695)
T ss_dssp CBCCCCEEEETTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEE
T ss_pred CccccEEEEeCCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEE
Confidence 3578888776554443322111 12223323778888887655 699999988876543210 01111223
Q ss_pred EecC--CCEEEEEeC--C-----CeEEEEEcCCCcc-----eEEEec---C-CCcEEEEEEcCCCCEEEEEeC-------
Q 010754 364 DWRN--NVSFATSST--D-----NMIYVCKIGENRP-----IKTFAG---H-QGEVNCVKWDPTGSLLASCSD------- 418 (502)
Q Consensus 364 ~~~~--~~~~~~~~~--d-----~~i~i~d~~~~~~-----~~~~~~---h-~~~i~~l~~sp~g~~las~s~------- 418 (502)
.+.. +..++.|+. + +.+.+||+.+..- -..+.. . .... +++...++++++.|+.
T Consensus 545 v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~iyv~GG~~~~~~~~ 623 (695)
T 2zwa_A 545 EFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRKLLIVGGTSPSGLFD 623 (695)
T ss_dssp EEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTEEEEECCBCSSCCCC
T ss_pred EEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCEEEEECCccCCCCCC
Confidence 3332 345666654 2 4588999988761 111111 1 1112 2223333677777774
Q ss_pred -CCcEEEEECCCCeeE
Q 010754 419 -DVTAKIWNMKQDKYV 433 (502)
Q Consensus 419 -dg~i~iwd~~~~~~~ 433 (502)
...|.+||..+.+..
T Consensus 624 ~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 624 RTNSIISLDPLSETLT 639 (695)
T ss_dssp TTTSEEEEETTTTEEE
T ss_pred CCCeEEEEECCCCeEE
Confidence 345899999887754
No 348
>1uuj_A Platelet-activating factor acetylhydrolase IB ALP subunit; mitosis, neuroge cytoskeleton, cell division, microtubule; 1.75A {Mus musculus} SCOP: a.221.1.1
Probab=90.35 E-value=0.1 Score=37.22 Aligned_cols=30 Identities=30% Similarity=0.431 Sum_probs=28.1
Q ss_pred chhhHHHHHHHHhcCCcchhhcccccccCc
Q 010754 7 EELNYLVFRYLQESGLLHSAFVLGYEAGIN 36 (502)
Q Consensus 7 ~evn~li~rYlqE~g~~~sA~~~~~e~~~~ 36 (502)
+|+|.-|..||+.+||..++-+|..|..++
T Consensus 11 eEL~kaI~~YL~~~~~~~~~~alr~e~~~~ 40 (88)
T 1uuj_A 11 DELNRAIADYLRSNGYEEAYSVFKKEAELD 40 (88)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHhcCC
Confidence 799999999999999999999999997766
No 349
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=89.24 E-value=7.6 Score=34.93 Aligned_cols=178 Identities=12% Similarity=0.011 Sum_probs=92.9
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEECCC--ceEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 353 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~--~~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 353 (502)
.|..++.-.. +.+.-. ||.|..|-.+. .+-. -......|..++..... .++. . ||.|+.|-......+..-
T Consensus 25 ~i~~ia~G~~--h~~~l~-~G~v~~wG~n~~Gqlg~-p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYF--HGLALK-GGKVLGWGANLNGQLTM-PAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSS--EEEEEE-TTEEEEEECCSSSTTSC-CGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCC--eEEEEE-CCEEEEEeCCCCCCCCC-CccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 4666665432 333335 89999997542 1111 11123467777654432 2333 4 999999976432211111
Q ss_pred eeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeE
Q 010754 354 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 433 (502)
Q Consensus 354 ~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~ 433 (502)
..-...|..|+......++.. +|.|+.|-......+..-......|..|+......++ -. ||.|+.|-......+
T Consensus 98 ~~~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gql 172 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQT 172 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTT
T ss_pred cccCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCC
Confidence 111235777777666656555 9999999866533222111123457777665443222 33 789999976542222
Q ss_pred EEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 434 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 434 ~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
..-..-...|..|+....-. +++ .++.+..|-
T Consensus 173 g~p~~~~~~v~~i~~G~~hs--------~al--~~G~v~~wG 204 (282)
T 3qhy_B 173 TVPAEAQSGVDDVAGGIFHS--------LAL--KDGKVIAWG 204 (282)
T ss_dssp SCCGGGGSSEEEEEECSSEE--------EEE--ETTEEEEEE
T ss_pred CCceecCCCeEEEEecCCEE--------EEE--ECCeEEEEE
Confidence 11111234577776655433 333 466666663
No 350
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=88.91 E-value=17 Score=40.49 Aligned_cols=177 Identities=8% Similarity=0.079 Sum_probs=97.7
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE--
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-- 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~-- 293 (502)
.+|.-=.|-. .+.|+..+. ..|.-|++.... .|..+ +..+..-....|..-.-+++.++++..|
T Consensus 106 e~VvfWkWis-~~~l~lVT~-~aVyHW~~~~~s-------~P~k~-----fdR~~~L~~~QIinY~~d~~~kW~~l~gi~ 171 (1630)
T 1xi4_A 106 DDVTFWKWIS-LNTVALVTD-NAVYHWSMEGES-------QPVKM-----FDRHSSLAGCQIINYRTDAKQKWLLLTGIS 171 (1630)
T ss_pred CCceEEEecC-CCeeEEEcC-CeEEEeccCCCC-------ccHHH-----HhcchhcccCeeEEeeeCCCCCeEEEEeec
Confidence 3455556653 334554443 579999996521 11111 1111111135577778888888776554
Q ss_pred -----CCCeEEEEECCCceEEEecCccCCeEEEEEe--cCC-CEEEEEec---CCeEEEEEcCCC---ceE------EEE
Q 010754 294 -----YDGQARIWSTNGDLKCTLSKHKGPIFSLKWN--KKG-DYLLTGSC---DKTAIVWDVKTE---EWK------QQF 353 (502)
Q Consensus 294 -----~dg~i~iwd~~~~~~~~~~~~~~~v~~l~~~--~~~-~~l~s~~~---d~~i~~wd~~~~---~~~------~~~ 353 (502)
-.|.+.+|+.+.+..+.+.+|.+....+... +.. +.+..+.. .+.+.|.++... ... ..+
T Consensus 172 ~~~~~v~G~mQLyS~er~~sQ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~ 251 (1630)
T 1xi4_A 172 AQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVF 251 (1630)
T ss_pred cCCCcccceeeeeecccccchhhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCcccccccc
Confidence 2488999999888888888887665555543 111 22222222 368888887432 110 000
Q ss_pred ee---ccCCeEEEEecC-CCEEEEEeCCCeEEEEEcCCCcceEEEecCCCcEEEEEE
Q 010754 354 EF---HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 406 (502)
Q Consensus 354 ~~---~~~~v~~v~~~~-~~~~~~~~~d~~i~i~d~~~~~~~~~~~~h~~~i~~l~~ 406 (502)
.. ..+-...+..++ .+.+...+.-|.|++||+.++.++..-+-...+|...+-
T Consensus 252 ~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~~~ris~~~iF~~~~ 308 (1630)
T 1xi4_A 252 FPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFVTAP 308 (1630)
T ss_pred CCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhhhccccCCceEEecc
Confidence 00 011122233322 345667788999999999999887655544444444433
No 351
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.56 E-value=9.6 Score=41.05 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=33.0
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 400 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5778888888999999999999999999999988764
No 352
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=80.56 E-value=29 Score=33.76 Aligned_cols=105 Identities=11% Similarity=0.061 Sum_probs=60.9
Q ss_pred CCeEEEEEecCCC-EEEEEecCCeEEEEEcCCCc---eEEEEe---e------ccCCeEEEEecCC----CEE-EEEeC-
Q 010754 316 GPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEE---WKQQFE---F------HSGPTLDVDWRNN----VSF-ATSST- 376 (502)
Q Consensus 316 ~~v~~l~~~~~~~-~l~s~~~d~~i~~wd~~~~~---~~~~~~---~------~~~~v~~v~~~~~----~~~-~~~~~- 376 (502)
...+.|+|.|+|. .|+++...|.|++++..... .+..+. . .......|+++|+ ..| ++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 3458899999996 56666789999999753221 122111 0 1346788999885 333 33221
Q ss_pred -C----------CeEEEEEcCCC----------cceEEEe--cCCCcEEEEEEcCCCCEEEEEeCCC
Q 010754 377 -D----------NMIYVCKIGEN----------RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDV 420 (502)
Q Consensus 377 -d----------~~i~i~d~~~~----------~~~~~~~--~h~~~i~~l~~sp~g~~las~s~dg 420 (502)
+ ..|.-|.+..+ +.+..+. ........|+|.|||.+.++.++.+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 14444555421 1222332 1123467899999998877766543
No 353
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=77.40 E-value=54 Score=31.75 Aligned_cols=113 Identities=12% Similarity=0.059 Sum_probs=58.6
Q ss_pred CceEEEEEcCCCC-eEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCc--cccCCCCeEEEEECCC----CCE
Q 010754 216 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGR--TNEKSKDVTTLDWNGE----GTL 288 (502)
Q Consensus 216 ~~V~~~~~~p~~~-~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~v~~l~~s~~----g~~ 288 (502)
..-+.|+|.|+|. .|+.+...|.|++++......... +..+...... ..........|+|+|+ +.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~-------~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~l 86 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEP-------YLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKL 86 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSC-------SEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeee-------ecCCcceeccCccccCCCcceeeEeCCCCcCCCEE
Confidence 4457899999986 455566789999997432211000 0000000000 0012356889999996 443
Q ss_pred EEEEECC------------CeEEEEECCC-----------ceEEEec--CccCCeEEEEEecCCCEEEEEec
Q 010754 289 LATGSYD------------GQARIWSTNG-----------DLKCTLS--KHKGPIFSLKWNKKGDYLLTGSC 335 (502)
Q Consensus 289 l~s~~~d------------g~i~iwd~~~-----------~~~~~~~--~~~~~v~~l~~~~~~~~l~s~~~ 335 (502)
.++-+.. ..|.-|.+.. ..+..+. ........|.|.|+|.+.++.+.
T Consensus 87 Yv~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 87 YVSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp EEEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECC
T ss_pred EEEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCC
Confidence 3333321 1333354421 1122221 12234678999999987776554
No 354
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=74.44 E-value=4.6 Score=43.49 Aligned_cols=36 Identities=8% Similarity=0.074 Sum_probs=30.7
Q ss_pred CceEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccC
Q 010754 216 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG 251 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~ 251 (502)
..|.+++..++..++++-+.|+++|||++.+++++.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~ 271 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVE 271 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEe
Confidence 356788888888999999999999999999987543
No 355
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.88 E-value=37 Score=37.42 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=31.3
Q ss_pred cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEe
Q 010754 400 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 436 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~ 436 (502)
.+.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455667778899999999999999999999988764
No 356
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=72.36 E-value=65 Score=30.23 Aligned_cols=231 Identities=14% Similarity=0.052 Sum_probs=108.3
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC--
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-- 305 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-- 305 (502)
..++.-..||+|..|=....-.+...... ......... .. ....|..++- .....+.-..||.|..|-.+.
T Consensus 11 ~~~~~l~~~G~v~~wG~n~~GqLG~~~~~--~~~~p~~v~-~~--~~~~i~~i~~--G~~~~~~l~~~G~v~~wG~n~~G 83 (389)
T 3kci_A 11 RENLYFQGSGTIYGWGHNHRGQLGGIEGA--KVKVPTPCE-AL--ATLRPVQLIG--GEQTLFAVTADGKLYATGYGAGG 83 (389)
T ss_dssp ----------CEEEEEECTTSTTSSCSCS--EEEEEEECH-HH--HHTCEEEEEE--ETTEEEEEETTSCEEEEECCGGG
T ss_pred ccceeECCCCeEEEeeCCCCccCCCCcCc--cccCCEecc-cc--cCCceEEEEe--CCCeEEEEcCCCcEEEEECCCCC
Confidence 34445556788888876553322211111 111111110 00 0123444432 344566667889999985321
Q ss_pred c----------eEEEecC-ccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC--------ceE---EEEee-ccCCeEE
Q 010754 306 D----------LKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--------EWK---QQFEF-HSGPTLD 362 (502)
Q Consensus 306 ~----------~~~~~~~-~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~--------~~~---~~~~~-~~~~v~~ 362 (502)
. ....+.. ....+..++.+....+.+.-..||.|+.|-.... ... ..+.. ....|..
T Consensus 84 qLG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ 163 (389)
T 3kci_A 84 RLGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVD 163 (389)
T ss_dssp TTSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEE
T ss_pred CCCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEE
Confidence 0 1111111 1223455666666677777788999999964321 001 11111 1124666
Q ss_pred EEecCCCEEEEEeCCCeEEEEEcCCCcc----------e-EEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCC
Q 010754 363 VDWRNNVSFATSSTDNMIYVCKIGENRP----------I-KTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 430 (502)
Q Consensus 363 v~~~~~~~~~~~~~d~~i~i~d~~~~~~----------~-~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~ 430 (502)
|+..... .++-..+|.|+.|-....-. . ..+.. ....|..++......+.+.-..||.|+.|-....
T Consensus 164 va~G~~h-s~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~ 242 (389)
T 3kci_A 164 VAAGGAH-SACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDY 242 (389)
T ss_dssp EEECSSE-EEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGG
T ss_pred EEeCcCe-EEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCC
Confidence 6654433 34456789999997543110 0 11111 1235667766543356666778999999964321
Q ss_pred -----------eeEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 431 -----------KYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 431 -----------~~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
.....+.. ....|..|+....-. +.-+.++.+..|-
T Consensus 243 GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~~hs---------~alt~~G~v~~wG 290 (389)
T 3kci_A 243 GKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFS---------VALTKSGAVYTWG 290 (389)
T ss_dssp GTTSSSSCCCEEEEEECGGGTTSCEEEEEEETTEE---------EEEETTSCEEEEE
T ss_pred CCCCCCCCCCccccEEecccCCCcEEEEeCCCCEE---------EEEeCCCeEEEEe
Confidence 11112221 122466666655433 4456667777774
No 357
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=70.67 E-value=1e+02 Score=31.79 Aligned_cols=223 Identities=12% Similarity=0.088 Sum_probs=107.1
Q ss_pred EEEE-EcCCCCeEEEE-eC----CCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEE
Q 010754 219 CACA-WSPAGSLLASG-SG----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 292 (502)
Q Consensus 219 ~~~~-~~p~~~~l~sg-s~----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~ 292 (502)
..+. ++|++++++.+ |. -..++++|+.+++.+..... +. .+.- .-.......++|..+..++++.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~-------~k~~-~~~~~~~~~~~W~d~~~~~~~~ 202 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PI-------TNSG-KLLEGKFTYPTWINKDTIIFNL 202 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CB-------CTTC-CBCCEETCCEEEEETTEEEECC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cc-------cccc-cccccccceeeEECCCEEEEEe
Confidence 3444 88998866654 32 24699999999875431100 00 0000 0000012344665333333321
Q ss_pred ----------ECCCeEEEEECCCc---eEEEecCccCCe-EEEEEecCCC-----EEEEEecC---CeEEEEEcCC--Cc
Q 010754 293 ----------SYDGQARIWSTNGD---LKCTLSKHKGPI-FSLKWNKKGD-----YLLTGSCD---KTAIVWDVKT--EE 348 (502)
Q Consensus 293 ----------~~dg~i~iwd~~~~---~~~~~~~~~~~v-~~l~~~~~~~-----~l~s~~~d---~~i~~wd~~~--~~ 348 (502)
+.-..|+.|.+-+. -...+......+ .+...++++. .+++.+.+ ..+.+.|... +.
T Consensus 203 ~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 282 (711)
T 4hvt_A 203 VLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK 282 (711)
T ss_dssp CCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE
T ss_pred CCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc
Confidence 12256888876432 233343333333 2344455655 24443322 4566666543 33
Q ss_pred eEEEEeeccCCeEEEEecCCCEEEEE----------eCCCeEEEEEcCCCc-------ceEEEecC--CCcEEEEEEcCC
Q 010754 349 WKQQFEFHSGPTLDVDWRNNVSFATS----------STDNMIYVCKIGENR-------PIKTFAGH--QGEVNCVKWDPT 409 (502)
Q Consensus 349 ~~~~~~~~~~~v~~v~~~~~~~~~~~----------~~d~~i~i~d~~~~~-------~~~~~~~h--~~~i~~l~~sp~ 409 (502)
... +....... -+....+..++.. ...+.|..+++.+.. ....+..+ ...+..+.|..+
T Consensus 283 ~~~-l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 360 (711)
T 4hvt_A 283 LQK-INMPSDAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD 360 (711)
T ss_dssp EEE-CCSCTTCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS
T ss_pred ceE-eecCCcce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC
Confidence 222 22111111 1222223222311 246778899987632 23332223 346778888865
Q ss_pred CCEEEEEeCCCc--EEEEECCCCe-eEEE-ecc-CCCcEEEEEEccCCC
Q 010754 410 GSLLASCSDDVT--AKIWNMKQDK-YVHD-LRE-HSKEIYTIRWSPTGS 453 (502)
Q Consensus 410 g~~las~s~dg~--i~iwd~~~~~-~~~~-~~~-h~~~i~~v~~sp~g~ 453 (502)
.++++...++. |+++++.+++ .+.. +.. ..+.+..+.+++++.
T Consensus 361 -~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~ 408 (711)
T 4hvt_A 361 -RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEE 408 (711)
T ss_dssp -CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCS
T ss_pred -EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCC
Confidence 57777777764 6777776664 2233 321 124566666666665
No 358
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=70.65 E-value=70 Score=29.91 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=26.7
Q ss_pred CEEEEEECCCeEEEEECCC--ceEEEe--cCccCCeEEEEEec-CCCEEEEEecCC
Q 010754 287 TLLATGSYDGQARIWSTNG--DLKCTL--SKHKGPIFSLKWNK-KGDYLLTGSCDK 337 (502)
Q Consensus 287 ~~l~s~~~dg~i~iwd~~~--~~~~~~--~~~~~~v~~l~~~~-~~~~l~s~~~d~ 337 (502)
..|.+|+..| +.+++... ...... ......|.+|++.| +...|.+++..|
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 3677788777 44554322 222221 12345699999998 334455555444
No 359
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=70.15 E-value=20 Score=35.59 Aligned_cols=126 Identities=19% Similarity=0.223 Sum_probs=73.9
Q ss_pred CceEEEEEcCCCCeEEEEeC-CCcEEEEecCCCCccCCC-CCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEE
Q 010754 216 SEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGA-QNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 293 (502)
Q Consensus 216 ~~V~~~~~~p~~~~l~sgs~-dg~v~iw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~ 293 (502)
.+...|..+|||++++.++. +.++.++++.+....-.. ...+....... . .-.......+|.++|....+.-
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae-~-----e~GlGPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE-P-----ELGLGPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC-C-----BCCSCEEEEEECSSSEEEEEET
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee-c-----cCCCcccEEEECCCCceEeeee
Confidence 44568899999998776654 789999998752110000 00000111110 1 1123577889999996666666
Q ss_pred CCCeEEEEECCC-----------ceEEEecCccCCeEEEE-----EecCCCEEEEEec---CC----------eEEEEEc
Q 010754 294 YDGQARIWSTNG-----------DLKCTLSKHKGPIFSLK-----WNKKGDYLLTGSC---DK----------TAIVWDV 344 (502)
Q Consensus 294 ~dg~i~iwd~~~-----------~~~~~~~~~~~~v~~l~-----~~~~~~~l~s~~~---d~----------~i~~wd~ 344 (502)
-|..|..|++.. ..+..+..|-.+-...+ -.++|++|++... |+ +-.++|+
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~lnK~skdrfl~vGpl~pen~QlidI 476 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALSKFSKDRFLPVGPLHPENDQLIDI 476 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEESCCTTSSCCCSSSCCEEEEEEEC
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEecccccccCcCCCCCCCCcceeEec
Confidence 899999999652 24444544443322211 2568899988753 44 3467777
Q ss_pred CCC
Q 010754 345 KTE 347 (502)
Q Consensus 345 ~~~ 347 (502)
...
T Consensus 477 sGd 479 (638)
T 3sbq_A 477 SGD 479 (638)
T ss_dssp SSS
T ss_pred CCC
Confidence 543
No 360
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=62.51 E-value=1e+02 Score=28.77 Aligned_cols=173 Identities=7% Similarity=-0.004 Sum_probs=84.1
Q ss_pred CCeEEEEECC--CCCEEEEEECCC----eEEEEECCCceEEEecC--------------ccCCeEEEEEecC--CCEEEE
Q 010754 275 KDVTTLDWNG--EGTLLATGSYDG----QARIWSTNGDLKCTLSK--------------HKGPIFSLKWNKK--GDYLLT 332 (502)
Q Consensus 275 ~~v~~l~~s~--~g~~l~s~~~dg----~i~iwd~~~~~~~~~~~--------------~~~~v~~l~~~~~--~~~l~s 332 (502)
..|.+|++.| .+.+++ ++..| .|...+-.+.....+.. ....|.++++.|. ...|++
T Consensus 55 ~~v~~i~~dp~~~~~l~~-g~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLM-AARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEE-EEEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEE-EecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 4599999998 455544 44444 44443322322222111 1124778888872 456666
Q ss_pred EecCCeEEEEEcCCCceEEEEee-------------------ccCCeEEEEecC--CCEEEEEeCCCeEEEEEcCCCcce
Q 010754 333 GSCDKTAIVWDVKTEEWKQQFEF-------------------HSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPI 391 (502)
Q Consensus 333 ~~~d~~i~~wd~~~~~~~~~~~~-------------------~~~~v~~v~~~~--~~~~~~~~~d~~i~i~d~~~~~~~ 391 (502)
+...+.|...+- .++.-..+.. ....+.+|.+.+ ...+.++..++.|+..+ ..++.-
T Consensus 134 g~~~ggl~~S~D-gG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-DgG~tW 211 (394)
T 3b7f_A 134 GTSPQGLFRSTD-HGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DAGTDW 211 (394)
T ss_dssp EEETTEEEEESS-TTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-STTSSC
T ss_pred EecCCcEEEEcC-CCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CCCCCc
Confidence 666666665542 2222222211 112366777764 34455555445444332 222222
Q ss_pred EEEec-----C--------CCcEEEEEEcCC-CCEEEEEeCCCcEEEEECCCCeeEEEecc--CC---CcEEEEEEccCC
Q 010754 392 KTFAG-----H--------QGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLRE--HS---KEIYTIRWSPTG 452 (502)
Q Consensus 392 ~~~~~-----h--------~~~i~~l~~sp~-g~~las~s~dg~i~iwd~~~~~~~~~~~~--h~---~~i~~v~~sp~g 452 (502)
..+.. + ...+.+|.++|. ...|..+...+ |...+- .++....+.. .. ..+.+++++|..
T Consensus 212 ~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D-~G~tW~~~~~~l~~~~~~~~~~i~~~p~~ 289 (394)
T 3b7f_A 212 KPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDR-REGVWKRIGDAMPREVGDIGFPIVVHQRD 289 (394)
T ss_dssp EECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEET-TTTEEECGGGGSCTTTCSCEEEEEECSSC
T ss_pred eECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCC-CCCcceECCCCCCCCCccceEEEEECCCC
Confidence 22210 0 124889999986 35666666554 444442 2332222221 11 246778888754
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=59.58 E-value=21 Score=39.40 Aligned_cols=39 Identities=23% Similarity=0.231 Sum_probs=32.7
Q ss_pred CeEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 317 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 317 ~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
.+.+++..++..++++-+.|+++++|++.+++++.+...
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 345566677888999999999999999999999888654
No 362
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=58.27 E-value=16 Score=37.47 Aligned_cols=38 Identities=16% Similarity=0.399 Sum_probs=30.6
Q ss_pred CcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCeeEEEecc
Q 010754 399 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 438 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~dg~i~iwd~~~~~~~~~~~~ 438 (502)
..|.++.+ +..+|++-+.|.++|+|++.+++++....-
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 34665555 377999999999999999999998876653
No 363
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=57.12 E-value=31 Score=34.31 Aligned_cols=73 Identities=10% Similarity=0.167 Sum_probs=51.7
Q ss_pred CCCeEEEEECCCCCEEEEEE-CCCeEEEEECCC-------ce------EEEecCccCCeEEEEEecCCCEEEEEecCCeE
Q 010754 274 SKDVTTLDWNGEGTLLATGS-YDGQARIWSTNG-------DL------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTA 339 (502)
Q Consensus 274 ~~~v~~l~~s~~g~~l~s~~-~dg~i~iwd~~~-------~~------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i 339 (502)
......+..+|||+++++++ .+.++.++|++. +. +..-..-.-.....+|.++|+-..+.-.|..|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 34566788999999988776 467999999752 11 11111233456788999999555566689999
Q ss_pred EEEEcCC
Q 010754 340 IVWDVKT 346 (502)
Q Consensus 340 ~~wd~~~ 346 (502)
.-|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999864
No 364
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=55.35 E-value=1.4e+02 Score=28.17 Aligned_cols=236 Identities=9% Similarity=0.037 Sum_probs=117.8
Q ss_pred eEEEEEcCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCe
Q 010754 218 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 297 (502)
Q Consensus 218 V~~~~~~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~ 297 (502)
|..++.. +...+.-..||.|..|-......+................. ....|..++.. ..+.+.-..||.
T Consensus 77 v~~va~G--~~h~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~~~P~~v~-----~~~~i~~va~G--~~hs~al~~~G~ 147 (423)
T 3mvd_K 77 AVDISAG--GMHNLVLTKSGDIYSFGCNDEGALGRDTSEDGSESKPDLID-----LPGKALCISAG--DSHSACLLEDGR 147 (423)
T ss_dssp EEEEEEC--SSEEEEEETTSCEEEEECCSSSTTCSCCCSTTSSSSCEECC-----CSSCEEEEEEC--SSEEEEEETTSC
T ss_pred ceEEeeC--CCeEEEEeCCCeEEEeECCCCcCCCCCCcCCccccCCeEEc-----CCCCEEEEEcC--cCeEEEEeCCCe
Confidence 5555543 44555556789999997654322211110000000000000 12346665543 345566678899
Q ss_pred EEEEEC--C--Cce---------EEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcCCC-----------------
Q 010754 298 ARIWST--N--GDL---------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----------------- 347 (502)
Q Consensus 298 i~iwd~--~--~~~---------~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~----------------- 347 (502)
|..|-. + +.+ ..........|..++.. ..+.++-..+|.|+.|-....
T Consensus 148 v~~wG~~~n~~GqlG~~~~~~~~~p~~~~~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~ 225 (423)
T 3mvd_K 148 VFAWGSFRDSHGNMGLTIDGNKRTPIDLMEGTVCCSIASG--ADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRR 225 (423)
T ss_dssp EEEEECEECSSSEEESBTTBCEEEEEESSTTCCEEEEEEC--SSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTT
T ss_pred EEEEeCCCCCCCCcCcCCCCCCceeeEecCCCcEEEEecC--CCeEEEEecCCeEEEeeCCcCCccCCCccccccccccc
Confidence 999964 2 111 11111123346666543 345666678999999954221
Q ss_pred ------ceEEEEeeccCCeEEEEecCCCEEEEEeCCCeEEEEEcCCCcce-----------EEEecCCCcEEEEEEcCCC
Q 010754 348 ------EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI-----------KTFAGHQGEVNCVKWDPTG 410 (502)
Q Consensus 348 ------~~~~~~~~~~~~v~~v~~~~~~~~~~~~~d~~i~i~d~~~~~~~-----------~~~~~h~~~i~~l~~sp~g 410 (502)
.+..........+..+.......++.-..++.|+.|-......+ .........|..|+.. .
T Consensus 226 ~~~~~~~p~~v~~~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~~~~~v~~ia~G--~ 303 (423)
T 3mvd_K 226 GKRDLLRPTQLIITRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKTELKDIRHIAGG--Q 303 (423)
T ss_dssp TTTTTSSCEEECCTTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEECCCSEEEEEEC--S
T ss_pred ccccccCCeEEeecCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEcCCCCeEEEEcc--c
Confidence 11111111223455555554444555568899999875432110 0111113456666554 3
Q ss_pred CEEEEEeCCCcEEEEECCCC------------eeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEE
Q 010754 411 SLLASCSDDVTAKIWNMKQD------------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWI 475 (502)
Q Consensus 411 ~~las~s~dg~i~iwd~~~~------------~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~ 475 (502)
...+.-..||.|+.|-.... .....+..-...|..|+....-. +..+.++.+..|-
T Consensus 304 ~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~~v~~ia~G~~hs---------~alt~~G~v~~wG 371 (423)
T 3mvd_K 304 HHTVILTTDLKCSVVGRPEYGRLGLGDVKDVVEKPTIVKKLTEKIVSVGCGEVCS---------YAVTIDGKLYSWG 371 (423)
T ss_dssp SEEEEEETTCCEEEEECCGGGTTCSSSCCSCEEEEEECTTCCSCEEEEEEETTEE---------EEEETTSCEEEEE
T ss_pred CeEEEEeCCCcEEEEECCCCCCCCCCCccccccCceEeccCCCCEEEEEcCCCeE---------EEEcCCCCEEEEC
Confidence 34555577899999965321 11122222233677777665543 5556777787774
No 365
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=52.68 E-value=42 Score=33.68 Aligned_cols=54 Identities=15% Similarity=0.126 Sum_probs=37.8
Q ss_pred cEEEEEEcCCCCEEEEEeCC------------CcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCC
Q 010754 400 EVNCVKWDPTGSLLASCSDD------------VTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGS 453 (502)
Q Consensus 400 ~i~~l~~sp~g~~las~s~d------------g~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~ 453 (502)
..-.|+|+|.|++++.-..+ ..+.+.+..+++..+-+.++ ...++.++|+||++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~ 543 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK 543 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCC
Confidence 35679999999977665432 23555566677765555543 46799999999987
No 366
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=51.20 E-value=1.4e+02 Score=26.95 Aligned_cols=193 Identities=10% Similarity=0.042 Sum_probs=108.1
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q 010754 225 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN 304 (502)
Q Consensus 225 p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~ 304 (502)
|+..++++.+.+|.|+--.+..-........+ ...........+..+........++..+..|.++-+...
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g---------~~~~~lke~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~ 76 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGTGGKG---------LSSFDLNDGDEIVIALCVNTHDYLFMISNEGKLYLINAY 76 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCSSCCC---------EECCCCCTTCCEEEEEEEETTCEEEEEETTSEEEEEEGG
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhccccCCCC---------ceecccCCCCEEEEEEEECCCCEEEEEECCCeEEEEEHH
Confidence 45667888999999998776543211100000 000001112345555555555677778888887766532
Q ss_pred C---c-------e---EEEecCccCCeEEEEEec---CCCEEEEEecCCeEEEEEcCCCce-----EEEEee-ccCCeEE
Q 010754 305 G---D-------L---KCTLSKHKGPIFSLKWNK---KGDYLLTGSCDKTAIVWDVKTEEW-----KQQFEF-HSGPTLD 362 (502)
Q Consensus 305 ~---~-------~---~~~~~~~~~~v~~l~~~~---~~~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~-~~~~v~~ 362 (502)
. . . ...+. ....|.++...+ +..+|+..+..|.++...+..... +..+.. ..+.+..
T Consensus 77 ~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~d~lv~ 155 (312)
T 1suu_A 77 EIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDKDFVTS 155 (312)
T ss_dssp GSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTTCCEEE
T ss_pred HCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCCCEEEE
Confidence 1 1 0 00111 123444443332 457888899999999988743211 111111 1344555
Q ss_pred EEe-cCCCEEEEEeCCCeEEEEEcCCCc---------ceEEEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECC
Q 010754 363 VDW-RNNVSFATSSTDNMIYVCKIGENR---------PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 428 (502)
Q Consensus 363 v~~-~~~~~~~~~~~d~~i~i~d~~~~~---------~~~~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~ 428 (502)
+.. .++..++..+.+|.+..+....-. ....+. ....|.++..-.++..|++.+..|..+...+.
T Consensus 156 ~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~-~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 156 AEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLK-EGDLFVKVLSVKENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCC-TTCCEEEEEECTTCSEEEEEETTSEEEEEEGG
T ss_pred EEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeC-CCCEEEEEEEECCCCeEEEEECCCceEEEEHH
Confidence 544 456678889999999888875421 111222 23456666665566778889999999988874
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=51.04 E-value=1.6e+02 Score=27.56 Aligned_cols=89 Identities=7% Similarity=0.095 Sum_probs=55.7
Q ss_pred eEEEEEcCCC--ceEEEEeecc------CCeEEEEec---C-----CCE-EEEEeCCCeEEEEEcCCCcceEEEe-----
Q 010754 338 TAIVWDVKTE--EWKQQFEFHS------GPTLDVDWR---N-----NVS-FATSSTDNMIYVCKIGENRPIKTFA----- 395 (502)
Q Consensus 338 ~i~~wd~~~~--~~~~~~~~~~------~~v~~v~~~---~-----~~~-~~~~~~d~~i~i~d~~~~~~~~~~~----- 395 (502)
.|.+||+.+. +.++++.... ..+.++... + +.. +++=...+.|.++|+.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778888888 8888876532 234555543 2 222 4455567889999999886544331
Q ss_pred ---------cC----CCcEEEEEEcCC----CCEEEEEeCCCcEEEEEC
Q 010754 396 ---------GH----QGEVNCVKWDPT----GSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 396 ---------~h----~~~i~~l~~sp~----g~~las~s~dg~i~iwd~ 427 (502)
|. ...|..|+++|+ ++.|.-+...+ -++|.+
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V 251 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSV 251 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCC-CcEEEE
Confidence 11 136888999998 77776665544 234443
No 368
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=50.45 E-value=69 Score=31.91 Aligned_cols=62 Identities=13% Similarity=0.117 Sum_probs=42.6
Q ss_pred CcEEEEEEcCCCCEEEEEeC------------CCcEEEEECCCCeeEEEeccC-CCcEEEEEEccCCCCCCCCCccEEEE
Q 010754 399 GEVNCVKWDPTGSLLASCSD------------DVTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILA 465 (502)
Q Consensus 399 ~~i~~l~~sp~g~~las~s~------------dg~i~iwd~~~~~~~~~~~~h-~~~i~~v~~sp~g~~~~~~~~~l~la 465 (502)
.....|.|+++|.+.+.... ...|..++..+++....+.+. ...++.++|+||++ .|+++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~k-------tLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQK-------TLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSS-------EEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCC-------EEEEE
Confidence 35678999999988774332 125666777777765555432 45689999999998 66665
Q ss_pred ee
Q 010754 466 RL 467 (502)
Q Consensus 466 s~ 467 (502)
..
T Consensus 549 vQ 550 (592)
T 4a9v_A 549 IQ 550 (592)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 369
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=49.99 E-value=1.6e+02 Score=27.36 Aligned_cols=231 Identities=8% Similarity=0.021 Sum_probs=120.5
Q ss_pred cCCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEEC
Q 010754 224 SPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST 303 (502)
Q Consensus 224 ~p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~ 303 (502)
-|+..++++.+.+|.|+--.+..-...... .... ..+. ......+..+........|+..+..|.+.-+..
T Consensus 4 I~~e~~~v~lT~~GyIKr~~l~~y~~~~r~-g~g~--~~~~------lke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~ 74 (370)
T 3l6v_A 4 IAPEDVVVTLSHAGYAKRQPVSAYRAQRRG-GRGR--SAAS------TKEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPV 74 (370)
T ss_dssp CCCCCEEEEEESSCEEEEEEHHHHHHTCCC-CCCS--EEEE------CSCCCCEEEEEEECTTCEEEEEETTSEEEEEEG
T ss_pred ccCCCEEEEEeCCCEEEEeeHHHhhhhccC-CCCc--eecc------cCCCCEEEEEEEecCCCEEEEEeCCCeEEEEEH
Confidence 467788999999999997654321110000 0000 0000 011334555555555667777777887766542
Q ss_pred C----------CceEE---EecCccCCeEEEEEec---CCCEEEEEecCCeEEEEEcCCCce-----EEEEee-ccCCeE
Q 010754 304 N----------GDLKC---TLSKHKGPIFSLKWNK---KGDYLLTGSCDKTAIVWDVKTEEW-----KQQFEF-HSGPTL 361 (502)
Q Consensus 304 ~----------~~~~~---~~~~~~~~v~~l~~~~---~~~~l~s~~~d~~i~~wd~~~~~~-----~~~~~~-~~~~v~ 361 (502)
. |.... .+. ....|.++..-+ .+.+|+.++..|.++...+..... +..+.. ..+.+.
T Consensus 75 ~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~d~lv 153 (370)
T 3l6v_A 75 HQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEGDALV 153 (370)
T ss_dssp GGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTTCCEE
T ss_pred HHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCCCEEE
Confidence 1 11111 112 234455554332 456899999999999987643211 111111 123444
Q ss_pred EEEe-cCCCEEEEEeCCCeEEEEEcCCCcc-------eEEEe-cCCCcEEEEEEcC------------------------
Q 010754 362 DVDW-RNNVSFATSSTDNMIYVCKIGENRP-------IKTFA-GHQGEVNCVKWDP------------------------ 408 (502)
Q Consensus 362 ~v~~-~~~~~~~~~~~d~~i~i~d~~~~~~-------~~~~~-~h~~~i~~l~~sp------------------------ 408 (502)
.+.. ..+..++..+.+|.+..+....-.+ ++.+. .....|.++...+
T Consensus 154 ~v~~~~~~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~ 233 (370)
T 3l6v_A 154 GVALTDGDRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGA 233 (370)
T ss_dssp EEEEECSCCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC----------------------
T ss_pred EEEEeCCCceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEeccccccccccccccccccccccccc
Confidence 4443 4456688888899888887643211 11111 1234455554443
Q ss_pred -----------CCCEEEEEeCCCcEEEEECCC-------CeeEEEe--ccCCCcEEEEEEccCCCCCCCCCccEEEEeec
Q 010754 409 -----------TGSLLASCSDDVTAKIWNMKQ-------DKYVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILARLI 468 (502)
Q Consensus 409 -----------~g~~las~s~dg~i~iwd~~~-------~~~~~~~--~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~ 468 (502)
.+..|++.+..|..+...+.. ++=+..+ ....+.+..+.+..+. ..+++.+..
T Consensus 234 ~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~-------d~i~liT~~ 306 (370)
T 3l6v_A 234 EPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGST-------DEVMLISDG 306 (370)
T ss_dssp -------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTT-------CEEEEEETT
T ss_pred cccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCC-------ceEEEEcCC
Confidence 456888999999988887632 1212222 2223455555444322 356776666
Q ss_pred Cce
Q 010754 469 PYF 471 (502)
Q Consensus 469 ~~~ 471 (502)
+.+
T Consensus 307 G~~ 309 (370)
T 3l6v_A 307 GTL 309 (370)
T ss_dssp CCE
T ss_pred CeE
Confidence 654
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=47.46 E-value=1.5e+02 Score=26.20 Aligned_cols=153 Identities=10% Similarity=-0.020 Sum_probs=86.9
Q ss_pred CCCeEEEEECC-CCCEEEEEECCCeEEEEECCCc-------eEEEecCccCCeEEEEEecCCCEEEEEecCCeEEEEEcC
Q 010754 274 SKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGD-------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 345 (502)
Q Consensus 274 ~~~v~~l~~s~-~g~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~ 345 (502)
...|..+.... +..+++..+.+|.|+-.....- ....+.. ...+..+........++..+..|.+..+...
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~~~ill~T~~G~~~r~~~~ 145 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDETHILLFTKKGRVARFSVR 145 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSSCEEEEEETTSEEEEEEGG
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCCCEEEEEECCCEEEEEEhh
Confidence 34566654321 4678999999999999875321 1112222 3445555555556788888999998888753
Q ss_pred CC-------ceEEEEee-ccCCeEEEEe-cCCCEEEEEeCCCeEEEEEcCCC-------cceEEEecCCCcEEEEEEcCC
Q 010754 346 TE-------EWKQQFEF-HSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGEN-------RPIKTFAGHQGEVNCVKWDPT 409 (502)
Q Consensus 346 ~~-------~~~~~~~~-~~~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~-------~~~~~~~~h~~~i~~l~~sp~ 409 (502)
.- .=+..+.. ....+..+.. .++..++..+..|.+....+..- +-+..+ ...+.+..+.....
T Consensus 146 eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~ 224 (276)
T 3no0_A 146 EVPPSTPGARGVQGIKLEKNDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE 224 (276)
T ss_dssp GSCBCCTTCCCEECCCCCTTCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS
T ss_pred hCCCcCCCCCCEEEEccCCCCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC
Confidence 21 11111111 1234444443 45567888889999888876432 222233 23344555443333
Q ss_pred CCEEEEEeCCCcEEE--EECC
Q 010754 410 GSLLASCSDDVTAKI--WNMK 428 (502)
Q Consensus 410 g~~las~s~dg~i~i--wd~~ 428 (502)
...++..+.+|.+.. ++..
T Consensus 225 ~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 225 EVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp EEEEEEEETTSCEEEEEEEGG
T ss_pred CCEEEEEcCCCeEEEeeeCHH
Confidence 445666677777766 6643
No 371
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=46.66 E-value=91 Score=31.05 Aligned_cols=59 Identities=10% Similarity=0.092 Sum_probs=39.5
Q ss_pred CeEEEEecCCCEEEEEeCC-------------CeEEEEEcCCCcceEEEecC-CCcEEEEEEcCCCCEEEEEe
Q 010754 359 PTLDVDWRNNVSFATSSTD-------------NMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASCS 417 (502)
Q Consensus 359 ~v~~v~~~~~~~~~~~~~d-------------~~i~i~d~~~~~~~~~~~~h-~~~i~~l~~sp~g~~las~s 417 (502)
....|.|.+++.|..+... +.++.++..+++....+.+. ...++.++|+||++.|..+-
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3567788776666554332 25666776667665555443 35799999999999887664
No 372
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=46.41 E-value=31 Score=35.35 Aligned_cols=36 Identities=17% Similarity=0.343 Sum_probs=29.8
Q ss_pred eEEEEEecCCCEEEEEecCCeEEEEEcCCCceEEEEee
Q 010754 318 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 355 (502)
Q Consensus 318 v~~l~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~ 355 (502)
|.++.+ +..++++-+.|+++|+|++.+++++.....
T Consensus 224 Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 224 ISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred EEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 555444 468999999999999999999998887765
No 373
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=41.26 E-value=2.2e+02 Score=26.41 Aligned_cols=231 Identities=10% Similarity=0.074 Sum_probs=116.8
Q ss_pred CeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECCC--
Q 010754 228 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-- 305 (502)
Q Consensus 228 ~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~~-- 305 (502)
...+.-..||.|..|-......+...... .......+. ......+..++.+....+.+.-..||.|..|-.+.
T Consensus 63 ~~~~~l~~~G~v~~wG~n~~GqLG~g~~~--~~~~p~~v~---~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~G 137 (389)
T 3kci_A 63 QTLFAVTADGKLYATGYGAGGRLGIGGTE--SVSTPTLLE---SIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDG 137 (389)
T ss_dssp TEEEEEETTSCEEEEECCGGGTTSSSSSC--CEEEEEECG---GGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGG
T ss_pred CeEEEEcCCCcEEEEECCCCCCCCCCCcC--CccCCEEcc---cccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCC
Confidence 34445567788888865443222111111 111111111 11123466677777777888888999999995421
Q ss_pred c----------eEEEecCc-cCCeEEEEEecCCCEEEEEecCCeEEEEEcCC-Cc--------e--EEEEe-eccCCeEE
Q 010754 306 D----------LKCTLSKH-KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EE--------W--KQQFE-FHSGPTLD 362 (502)
Q Consensus 306 ~----------~~~~~~~~-~~~v~~l~~~~~~~~l~s~~~d~~i~~wd~~~-~~--------~--~~~~~-~~~~~v~~ 362 (502)
. ....+... ...|..++.. ..+.++...+|.|+.|-... ++ . ...+. .....+..
T Consensus 138 qLG~g~~~~~~~p~~v~~l~~~~i~~va~G--~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~v~~ 215 (389)
T 3kci_A 138 KLGHGNRSPCDRPRVIESLRGIEVVDVAAG--GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHRVVD 215 (389)
T ss_dssp TTCSSSCCCEEEEEECGGGTTSCEEEEEEC--SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEE
T ss_pred cCCCCCCccCcCCeEecccCCCeEEEEEeC--cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEecccCCCeEEE
Confidence 0 11111111 1245555543 45566667899999996432 11 0 11111 12234666
Q ss_pred EEecC-CCEEEEEeCCCeEEEEEcCCCcc----------e-EEEec-CCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC
Q 010754 363 VDWRN-NVSFATSSTDNMIYVCKIGENRP----------I-KTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 429 (502)
Q Consensus 363 v~~~~-~~~~~~~~~d~~i~i~d~~~~~~----------~-~~~~~-h~~~i~~l~~sp~g~~las~s~dg~i~iwd~~~ 429 (502)
++... ....++-..+|.|+.|-....-. . ..+.. ....|..|+... ...+.-..||.|+.|-...
T Consensus 216 ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v~~G~--~hs~alt~~G~v~~wG~n~ 293 (389)
T 3kci_A 216 IACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGS--QFSVALTKSGAVYTWGKGD 293 (389)
T ss_dssp EEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGGGTTSCEEEEEEET--TEEEEEETTSCEEEEECCG
T ss_pred EEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecccCCCcEEEEeCCC--CEEEEEeCCCeEEEEeCCC
Confidence 66543 34556667899999996542111 1 11111 112466666543 3444557789999997532
Q ss_pred Ce-----------eEEEecc-CCCcEEEEEEccCCCCCCCCCccEEEEeecCceEEEEe
Q 010754 430 DK-----------YVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLYWIC 476 (502)
Q Consensus 430 ~~-----------~~~~~~~-h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~iw~~ 476 (502)
.- ....+.. ....|..|+....-. +..+.++.+..|-.
T Consensus 294 ~GqLG~g~~~~~~~P~~v~~l~~~~v~~ia~G~~h~---------~al~~~G~v~~wG~ 343 (389)
T 3kci_A 294 YHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHC---------VCCTEDGEVYTWGD 343 (389)
T ss_dssp GGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEE---------EEEETTCCEEEEEC
T ss_pred CCCCCCCCCccccCCeEeccCCCCCEEEEEeccCeE---------EEECCCCCEEEeeC
Confidence 10 1111221 123466666544422 55567777777743
No 374
>2d68_A FOP, FGFR1OP; alpha helical bundle, dimer, cell cycle; 1.60A {Homo sapiens}
Probab=40.24 E-value=11 Score=26.51 Aligned_cols=29 Identities=24% Similarity=0.143 Sum_probs=26.4
Q ss_pred hhHHHHHHHHhcCCcchhhcccccccCcc
Q 010754 9 LNYLVFRYLQESGLLHSAFVLGYEAGINK 37 (502)
Q Consensus 9 vn~li~rYlqE~g~~~sA~~~~~e~~~~~ 37 (502)
||=||==|||=.||.+|.-+|+-|++...
T Consensus 21 i~~LVrEyLef~~l~~TlsVf~pEs~l~~ 49 (82)
T 2d68_A 21 VASLVAEFLQFFNLDFTLAVFQPETSTLQ 49 (82)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHcCCcchHHhhhhccCCCC
Confidence 67899999999999999999999999873
No 375
>2l1n_A Uncharacterized protein; DUF1823, hypothetical protein, cyanobacteria, structural GEN PSI-biology, protein structure initiative; NMR {Synechococcus elongatus}
Probab=38.29 E-value=12 Score=27.92 Aligned_cols=18 Identities=33% Similarity=0.569 Sum_probs=14.1
Q ss_pred CCcchhhHHHHHHHHhcCCcc
Q 010754 4 ITSEELNYLVFRYLQESGLLH 24 (502)
Q Consensus 4 lts~evn~li~rYlqE~g~~~ 24 (502)
|+-..||-|||.|| ||.-
T Consensus 18 isD~~Vn~LVW~~L---GYr~ 35 (120)
T 2l1n_A 18 LSDAEANALVWQAL---GYVW 35 (120)
T ss_dssp SCHHHHHHHHHHHH---TCCE
T ss_pred cCHHHHHHHHHHHh---Cccc
Confidence 44559999999999 6654
No 376
>2dk5_A DNA-directed RNA polymerase III 39 kDa polypeptide; structural genomics, winged helix domain, NPPSFA; NMR {Homo sapiens} SCOP: a.4.5.85
Probab=38.23 E-value=7 Score=28.20 Aligned_cols=50 Identities=18% Similarity=0.230 Sum_probs=34.2
Q ss_pred CCCcchhhHHHHHHHHhcCC-cchhhcccccccCccCCCCCCCCCchhHHHHHHhhhhh
Q 010754 3 SITSEELNYLVFRYLQESGL-LHSAFVLGYEAGINKCNIDGNLVPPRALITFVQKGLQY 60 (502)
Q Consensus 3 ~lts~evn~li~rYlqE~g~-~~sA~~~~~e~~~~~~~~~~~~ip~~aLv~l~qkgl~y 60 (502)
.||.+| ++||+||.|+|- +.+.-.+.++.+++.... .++|=+|..|||..
T Consensus 17 ~Lt~~q--~~Vl~~I~~~g~~gi~qkeLa~~~~l~~~tv------t~iLk~LE~kglIk 67 (91)
T 2dk5_A 17 GSDNQE--KLVYQIIEDAGNKGIWSRDVRYKSNLPLTEI------NKILKNLESKKLIK 67 (91)
T ss_dssp CSCSSH--HHHHHHHHHHCTTCEEHHHHHHHTTCCHHHH------HHHHHHHHHTTSEE
T ss_pred CCCHHH--HHHHHHHHHcCCCCcCHHHHHHHHCCCHHHH------HHHHHHHHHCCCEE
Confidence 466665 799999999886 555556666665553222 46788888888765
No 377
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=36.00 E-value=1.2e+02 Score=30.28 Aligned_cols=57 Identities=11% Similarity=0.103 Sum_probs=39.7
Q ss_pred eEEEEecCCCEEEEEeCC-------------CeEEEEEcCCCcceEEEecC-CCcEEEEEEcCCCCEEEEE
Q 010754 360 TLDVDWRNNVSFATSSTD-------------NMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 360 v~~v~~~~~~~~~~~~~d-------------~~i~i~d~~~~~~~~~~~~h-~~~i~~l~~sp~g~~las~ 416 (502)
.-.|.|.+.+.|..+... +.+.+.+..+++....+.++ ...++.++|+||++.|+..
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 456778777766666442 24566666667666656555 4679999999999988765
No 378
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=35.52 E-value=2.4e+02 Score=25.23 Aligned_cols=192 Identities=9% Similarity=0.030 Sum_probs=102.8
Q ss_pred CCCCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEECCCCCEEEEEECCCeEEEEECC
Q 010754 225 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN 304 (502)
Q Consensus 225 p~~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s~~g~~l~s~~~dg~i~iwd~~ 304 (502)
|+..++++.+.+|.|+--.+.+-........ . ...........+..+........|+..+..|.+.-+...
T Consensus 1 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~---g------~~~~~~ke~D~l~~~~~~~~~~~ll~fT~~G~~~~~~~~ 71 (307)
T 1zi0_A 1 TQEDVVVTLSHQGYVKYQPLSEYEAQRRGGK---G------KSAARIKEEDFIDRLLVANTHDHILCFSSRGRVYSMKVY 71 (307)
T ss_dssp CCCEEEEEEETTSEEEEEECC-----------------------------CCEEEEEEEETTCEEEEEETTSEEEEEEGG
T ss_pred CCCcEEEEEeCCCEEEEeeHHHhhhhccCCC---C------ceeeeeCCCCEEEEEEEECCCCEEEEEECCCEEEEEEhh
Confidence 3556788889999998776654221100000 0 000000112334444444455667777777876665431
Q ss_pred ----------CceEE---EecCccCCeEEEEEe---cCCCEEEEEecCCeEEEEEcCCCc-----eEEEEee-ccCCeEE
Q 010754 305 ----------GDLKC---TLSKHKGPIFSLKWN---KKGDYLLTGSCDKTAIVWDVKTEE-----WKQQFEF-HSGPTLD 362 (502)
Q Consensus 305 ----------~~~~~---~~~~~~~~v~~l~~~---~~~~~l~s~~~d~~i~~wd~~~~~-----~~~~~~~-~~~~v~~ 362 (502)
|.... .+ .....|.++..- .++.+++..+..|.++...+.... -+..+.. ..+.+..
T Consensus 72 elp~~~~~a~G~~i~~~l~l-~~~e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~d~lv~ 150 (307)
T 1zi0_A 72 QLPEATRGARGRPIVNLLPL-EQDERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDGDELIG 150 (307)
T ss_dssp GSCCCCSSSCCEEGGGTSCC-CTTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTTCCEEE
T ss_pred HCcCCCCCCCCeEhhhccCC-CCCCEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCCCEEEE
Confidence 11110 11 123345555432 345689999999999998764211 1111111 1244544
Q ss_pred EEe-cCCCEEEEEeCCCeEEEEEcCCCcc-------eE--EEecCCCcEEEEEEcCCCCEEEEEeCCCcEEEEEC
Q 010754 363 VDW-RNNVSFATSSTDNMIYVCKIGENRP-------IK--TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 427 (502)
Q Consensus 363 v~~-~~~~~~~~~~~d~~i~i~d~~~~~~-------~~--~~~~h~~~i~~l~~sp~g~~las~s~dg~i~iwd~ 427 (502)
+.. ..+..++..+.+|.+..+....-.. +. .+. ....|.++...+++..|++.+..|.++-.++
T Consensus 151 ~~~~~~~~~i~l~T~~G~~irf~~~~v~~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 151 VDLTSGEDEVMLFSAEGKVVRFKESSVRAMGCNTTGVRGIRLG-EGDKVVSLIVPRGDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEECCCSSCEEEEEETTSEEEEECG
T ss_pred EEEeCCCCEEEEECCCCcEEEEEHHHcCccCCCCCCeEeEEeC-CCCEEEEEEEecCCCEEEEEEcCCceEEEEH
Confidence 444 4556788888999988887643211 11 122 2345767665555677888999999988876
No 379
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=34.35 E-value=2.7e+02 Score=25.31 Aligned_cols=191 Identities=10% Similarity=-0.019 Sum_probs=104.0
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEE---CC-------CceEEEec--CccCCeEEEEEec---CCCEEEEEecCCeEE
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWS---TN-------GDLKCTLS--KHKGPIFSLKWNK---KGDYLLTGSCDKTAI 340 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd---~~-------~~~~~~~~--~~~~~v~~l~~~~---~~~~l~s~~~d~~i~ 340 (502)
.+..+........|+.-+..|.++-.. +. +..+..+. .....|.++..-+ +..+++.++.+|.|+
T Consensus 43 ~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iK 122 (327)
T 3uc1_A 43 IVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVK 122 (327)
T ss_dssp CEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEE
T ss_pred EEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEE
Confidence 344444444455666666677666554 21 11111111 1233455543333 468999999999999
Q ss_pred EEEcCCCce-----EEEEee-ccCCeEEEEe-cCCCEEEEEeCCCeEEEEEcC--CCcc---------eEEEecCCCcEE
Q 010754 341 VWDVKTEEW-----KQQFEF-HSGPTLDVDW-RNNVSFATSSTDNMIYVCKIG--ENRP---------IKTFAGHQGEVN 402 (502)
Q Consensus 341 ~wd~~~~~~-----~~~~~~-~~~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~--~~~~---------~~~~~~h~~~i~ 402 (502)
...+..... +..+.. ..+.+..+.. .....++..+..|.+..+... .-.. ...+. ....|.
T Consensus 123 r~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~~d~Vv 201 (327)
T 3uc1_A 123 KSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-IDDRLL 201 (327)
T ss_dssp EEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-TTCCEE
T ss_pred EeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-CCCEEE
Confidence 988654221 111111 1233444433 455678888899998888776 2211 11122 245677
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEECCCC-------eeEEEec--cCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 403 CVKWDPTGSLLASCSDDVTAKIWNMKQD-------KYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 403 ~l~~sp~g~~las~s~dg~i~iwd~~~~-------~~~~~~~--~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
++...+.+.+|+..+..|.++.-.+... +-+..++ .-...+..+..... +..+++.+..+....
T Consensus 202 ~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~-------~~~i~l~T~~G~~ir 274 (327)
T 3uc1_A 202 SLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDD-------DSELYAVTSGGGVIR 274 (327)
T ss_dssp EEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECT-------TCEEEEEEGGGCEEE
T ss_pred EEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCC-------CccEEEEcCCCeEEE
Confidence 7776666778999999999988875321 2222222 21234555443322 236777777776444
Q ss_pred E
Q 010754 474 W 474 (502)
Q Consensus 474 w 474 (502)
+
T Consensus 275 ~ 275 (327)
T 3uc1_A 275 T 275 (327)
T ss_dssp E
T ss_pred E
Confidence 3
No 380
>1dum_A Magainin 2; antibiotic, dimer, amphipathic helix, membrane, vesicle, bilayer, antimicrobial protein; NMR {Synthetic} SCOP: j.4.1.1 PDB: 2mag_A
Probab=30.51 E-value=8.5 Score=19.14 Aligned_cols=12 Identities=42% Similarity=0.348 Sum_probs=10.0
Q ss_pred Ccchhhcccccc
Q 010754 22 LLHSAFVLGYEA 33 (502)
Q Consensus 22 ~~~sA~~~~~e~ 33 (502)
|-|||-.|++.|
T Consensus 5 ylhsakkfgkaw 16 (26)
T 1dum_A 5 YLHSAKKFGKAW 16 (26)
T ss_dssp TTTTHHHHHHHH
T ss_pred HHHHHHHHhHHH
Confidence 678898888877
No 381
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=30.49 E-value=4.1e+02 Score=26.34 Aligned_cols=42 Identities=17% Similarity=0.246 Sum_probs=24.9
Q ss_pred cCCCcEEEEEEcCC--CCEEEEEeCCC----cEEEEECCCCeeEEEec
Q 010754 396 GHQGEVNCVKWDPT--GSLLASCSDDV----TAKIWNMKQDKYVHDLR 437 (502)
Q Consensus 396 ~h~~~i~~l~~sp~--g~~las~s~dg----~i~iwd~~~~~~~~~~~ 437 (502)
+|...+....|.|+ |.-++.+.+++ -..+.|..+++.+....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~ 408 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVY 408 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEEC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcC
Confidence 45555555566665 34566665541 24457777887776654
No 382
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=29.68 E-value=2.9e+02 Score=24.29 Aligned_cols=189 Identities=10% Similarity=-0.032 Sum_probs=101.8
Q ss_pred CeEEEEECCCCCEEEEEECCCeEEEEEC---CCceEEEecCccCCeEEEEEec-CCCEEEEEecCCeEEEEEcCCCc---
Q 010754 276 DVTTLDWNGEGTLLATGSYDGQARIWST---NGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEE--- 348 (502)
Q Consensus 276 ~v~~l~~s~~g~~l~s~~~dg~i~iwd~---~~~~~~~~~~~~~~v~~l~~~~-~~~~l~s~~~d~~i~~wd~~~~~--- 348 (502)
.+..+.-......|+.-+..|.++--.. .......+......|..+.... +..+++..+.+|.++...+..-.
T Consensus 25 ~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~~~ll~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~~ 104 (276)
T 3no0_A 25 PVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSKVSLKSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYKA 104 (276)
T ss_dssp CEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEECCCSSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTCS
T ss_pred eEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcccccCCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhhc
Confidence 3444443344445666677777664432 1110000122345566654421 46789999999999999875432
Q ss_pred -eEEEEee-ccCCeEEEEe-cCCCEEEEEeCCCeEEEEEcCCCc---------ceEEEecCCCcEEEEEEcCCCCEEEEE
Q 010754 349 -WKQQFEF-HSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENR---------PIKTFAGHQGEVNCVKWDPTGSLLASC 416 (502)
Q Consensus 349 -~~~~~~~-~~~~v~~v~~-~~~~~~~~~~~d~~i~i~d~~~~~---------~~~~~~~h~~~i~~l~~sp~g~~las~ 416 (502)
-+..+.. ....+..+.. .....++..+..|.++.+....-. ....+. ....|.++...+++..|+..
T Consensus 105 ~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~-~~d~vv~~~~~~~~~~ll~~ 183 (276)
T 3no0_A 105 QGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLE-KNDETSGLRIWNGEPYLLVI 183 (276)
T ss_dssp TTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEESSCSEEEEE
T ss_pred CCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccC-CCCEEEEEEEeCCCCEEEEE
Confidence 0111111 1234444443 345568888899998888754211 111222 23556666655667788899
Q ss_pred eCCCcEEEEECCC-------CeeEEEeccCCCcEEEEEEccCCCCCCCCCccEEEEeecCceEE
Q 010754 417 SDDVTAKIWNMKQ-------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILARLIPYFLY 473 (502)
Q Consensus 417 s~dg~i~iwd~~~-------~~~~~~~~~h~~~i~~v~~sp~g~~~~~~~~~l~las~~~~~~i 473 (502)
+..|.++...+.. ++-+..+ .....+..+..... +..+++.+..+.+..
T Consensus 184 T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~-------~~~i~~~t~~G~~ir 239 (276)
T 3no0_A 184 TAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKE-------EVELLITTKNGKAFY 239 (276)
T ss_dssp ETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESS-------EEEEEEEETTSCEEE
T ss_pred eCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCC-------CCEEEEEcCCCeEEE
Confidence 9999999888632 2222233 22334444433221 235677777766544
No 383
>1xkm_A Distinctin chain A; pore-forming peptide, heterodimer, structure, homodimer, disulfide, four-helix bundle, antibiotic; NMR {Synthetic} SCOP: j.4.1.6
Probab=29.65 E-value=36 Score=16.93 Aligned_cols=15 Identities=47% Similarity=0.620 Sum_probs=11.1
Q ss_pred CCCCch--hHHHHHHhh
Q 010754 43 NLVPPR--ALITFVQKG 57 (502)
Q Consensus 43 ~~ip~~--aLv~l~qkg 57 (502)
..|||| |||.-+.|-
T Consensus 3 revppgftaliktlrkc 19 (26)
T 1xkm_A 3 REVPPGFTALIKTLRKC 19 (26)
T ss_dssp TCSCHHHHHHHHHHHHH
T ss_pred CcCCCcHHHHHHHHHhc
Confidence 468998 788777664
No 384
>1sfu_A 34L protein; protein/Z-DNA complex, DNA binding protein/DNA complex; 2.00A {Yaba-like disease virus} SCOP: a.4.5.19
Probab=26.94 E-value=29 Score=23.77 Aligned_cols=20 Identities=20% Similarity=0.488 Sum_probs=15.6
Q ss_pred CCcchhhHHHHHHHHhcCCcc
Q 010754 4 ITSEELNYLVFRYLQESGLLH 24 (502)
Q Consensus 4 lts~evn~li~rYlqE~g~~~ 24 (502)
++-.+||.++|+ ||+.||-+
T Consensus 41 ~sK~~vNr~LY~-L~kkG~V~ 60 (75)
T 1sfu_A 41 INKKKINQQLYK-LQKEDTVK 60 (75)
T ss_dssp CCHHHHHHHHHH-HHHTTSEE
T ss_pred CCHHHHHHHHHH-HHHCCCEe
Confidence 455689999999 77888864
No 385
>2jp7_A MRNA export factor MEX67; solution MEX67, UBA, translation; NMR {Saccharomyces cerevisiae} PDB: 2khh_A
Probab=25.86 E-value=18 Score=23.34 Aligned_cols=29 Identities=14% Similarity=0.036 Sum_probs=21.8
Q ss_pred HHHHhcC--CcchhhcccccccCccCCCCCCCCCchhHHH
Q 010754 15 RYLQESG--LLHSAFVLGYEAGINKCNIDGNLVPPRALIT 52 (502)
Q Consensus 15 rYlqE~g--~~~sA~~~~~e~~~~~~~~~~~~ip~~aLv~ 52 (502)
.+|+++| |+.|..+|.. . ...|||-|.+.
T Consensus 26 ~cL~~n~Wd~~~A~~~F~~---~------~~~IP~eAF~~ 56 (57)
T 2jp7_A 26 MLAEQSNWNYEVAIKGFQS---S------MNGIPREAFVQ 56 (57)
T ss_dssp HHHHHTTTCSHHHHHHHHH---S------TTTSCHHHHTT
T ss_pred HHHHHcCCCHHHHHHHHHH---H------HcCCCHHHhcc
Confidence 6788888 7888888885 1 24699988763
No 386
>2fwt_A DHC, diheme cytochrome C; diheme protein, electron transfer, sphaeroides heme protein, oxygen-binding, electron transpor; HET: HEM; 1.85A {Rhodobacter sphaeroides}
Probab=24.80 E-value=29 Score=26.64 Aligned_cols=17 Identities=18% Similarity=0.155 Sum_probs=11.8
Q ss_pred CCCcchhhHHHHHHHHhc
Q 010754 3 SITSEELNYLVFRYLQES 20 (502)
Q Consensus 3 ~lts~evn~li~rYlqE~ 20 (502)
+|+.++. .|||+|||-.
T Consensus 46 ~Ld~~~~-~~I~~YLq~~ 62 (125)
T 2fwt_A 46 SLDEASR-GQIESYLVAN 62 (125)
T ss_dssp CCCHHHH-HHHHHHHHHT
T ss_pred CCCHHHH-HHHHHHHHHh
Confidence 4654554 4999999943
No 387
>2cp8_A NEXT to BRCA1 gene 1 protein; UBA domain, structural genomics, human, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.5.2.1
Probab=24.73 E-value=43 Score=21.26 Aligned_cols=24 Identities=21% Similarity=0.117 Sum_probs=18.0
Q ss_pred CCCCcchhhHHHHHHHHhcCCcch
Q 010754 2 SSITSEELNYLVFRYLQESGLLHS 25 (502)
Q Consensus 2 ~~lts~evn~li~rYlqE~g~~~s 25 (502)
.|+-++|..--.-+-|+|.||...
T Consensus 1 ~~~~~ee~~a~~L~~L~eMGF~D~ 24 (54)
T 2cp8_A 1 GSSGSSGQTAALMAHLFEMGFCDR 24 (54)
T ss_dssp CCCSSCTTHHHHHHHHHHHTCCCH
T ss_pred CCCCHHHhhHHHHHHHHHcCCCcH
Confidence 366777777777888999999543
No 388
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=24.32 E-value=2.1e+02 Score=20.95 Aligned_cols=13 Identities=8% Similarity=0.110 Sum_probs=6.5
Q ss_pred EEEEEecCCCEEE
Q 010754 319 FSLKWNKKGDYLL 331 (502)
Q Consensus 319 ~~l~~~~~~~~l~ 331 (502)
..+.+..+|+.++
T Consensus 22 ~~L~~q~dGnLvl 34 (111)
T 3mez_A 22 AAFVMQGDCNLVL 34 (111)
T ss_dssp EEEEECTTSCEEE
T ss_pred EEEEEccCCeEEE
Confidence 4444555555544
No 389
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=23.58 E-value=2.1e+02 Score=20.70 Aligned_cols=14 Identities=7% Similarity=0.133 Sum_probs=8.0
Q ss_pred EEEEcCCCCEEEEE
Q 010754 403 CVKWDPTGSLLASC 416 (502)
Q Consensus 403 ~l~~sp~g~~las~ 416 (502)
.+.+.++|++++-+
T Consensus 86 ~l~L~ddGNlVly~ 99 (105)
T 4h3o_A 86 ILILQDDGNVIIYG 99 (105)
T ss_dssp EEEECTTSCEEEEE
T ss_pred EEEEeCCCeEEEEC
Confidence 34556666666553
No 390
>2zyz_A Putative uncharacterized protein PAE0789; crenarchaea, heterotetramer, RNA PROC endonuclease, hydrolase, tRNA processing; 1.70A {Pyrobaculum aerophilum}
Probab=22.79 E-value=42 Score=25.31 Aligned_cols=52 Identities=19% Similarity=0.190 Sum_probs=35.0
Q ss_pred cchhhHHHHHHHHhcCCcchhhcccccc-cCccCCC------CCCCCCchhHHHHHHhh
Q 010754 6 SEELNYLVFRYLQESGLLHSAFVLGYEA-GINKCNI------DGNLVPPRALITFVQKG 57 (502)
Q Consensus 6 s~evn~li~rYlqE~g~~~sA~~~~~e~-~~~~~~~------~~~~ip~~aLv~l~qkg 57 (502)
.+-+-|.|||.|.|-||-.....|.+.. ....+.+ ....+|+..|+..+..+
T Consensus 21 ~~~l~y~VYkDLR~RG~~vk~rvY~~~~pg~~hs~ylV~vl~e~~~i~~~~L~~~vRla 79 (116)
T 2zyz_A 21 MDVLQEQVFKDLKSRGFKIIEQLDDKIFIAEKKERYLFYVMVEGVEVTIQTLLSVINMG 79 (116)
T ss_dssp CCHHHHHHHHHHHTTTCEEEEEEETTEEEEESSSEEEEEEEETTCCBCHHHHHHHHHHH
T ss_pred ccceeeHHHHHHHHCCCcccEEEcCCCCCCCCcccEEEEEecCCCccCHHHHHHHHHHh
Confidence 3456699999999999999886665531 0111110 14578899998887665
No 391
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=22.45 E-value=4.7e+02 Score=24.31 Aligned_cols=82 Identities=11% Similarity=0.173 Sum_probs=48.6
Q ss_pred CceEEEEEcCC----CCeEEEEeCCCcEEEEecCCCCccCCCCCCCceeEEEeeecCccccCCCCeEEEEEC-CCCCEEE
Q 010754 216 SEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-GEGTLLA 290 (502)
Q Consensus 216 ~~V~~~~~~p~----~~~l~sgs~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~s-~~g~~l~ 290 (502)
..|..|+++|+ ++.|.-....+ -++|.+.+..+....... .+..+.. .+....-..+++. .+|.+++
T Consensus 220 ~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~--~v~~~G~-----kg~~s~~~~~~~D~~~G~ly~ 291 (381)
T 3q6k_A 220 AGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKL--NPELLGN-----RGKYNDAIALAYDPKTKVIFF 291 (381)
T ss_dssp CCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCC--CCEEEEE-----CCTTCCEEEEEECTTTCEEEE
T ss_pred cCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhh--ceEEeee-----cCCCCCcceEEEeCCCCeEEE
Confidence 57999999998 67777776644 456666543221110011 1111110 0112345567775 6787777
Q ss_pred EEECCCeEEEEECCC
Q 010754 291 TGSYDGQARIWSTNG 305 (502)
Q Consensus 291 s~~~dg~i~iwd~~~ 305 (502)
+--....|..|+..+
T Consensus 292 ~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 292 AEANTKQVSCWNTQK 306 (381)
T ss_dssp EESSSSEEEEEETTS
T ss_pred EeccCCeEEEEeCCC
Confidence 777889999999876
No 392
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=22.43 E-value=2.3e+02 Score=20.77 Aligned_cols=14 Identities=7% Similarity=0.024 Sum_probs=6.3
Q ss_pred EEEEeCCCcEEEEE
Q 010754 413 LASCSDDVTAKIWN 426 (502)
Q Consensus 413 las~s~dg~i~iwd 426 (502)
.+.--.||.+.+|+
T Consensus 92 ~~~L~~dGnlvly~ 105 (113)
T 3mez_B 92 VLILQINGQAVVYG 105 (113)
T ss_dssp EEEECTTSCEEEEC
T ss_pred EEEEcCCceEEEec
Confidence 33344445555543
Done!