Query 010757
Match_columns 502
No_of_seqs 103 out of 110
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 13:37:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010757.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010757hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2cw9_A Translocase of inner mi 92.5 0.76 2.6E-05 43.1 10.6 99 398-498 76-187 (194)
2 4gb5_A Uncharacterized protein 89.1 0.68 2.3E-05 40.7 6.3 61 439-499 80-140 (159)
3 3soy_A NTF2-like superfamily p 88.8 0.56 1.9E-05 41.4 5.6 57 434-495 72-130 (145)
4 3b8l_A Uncharacterized protein 86.5 3 0.0001 36.5 9.0 48 446-499 103-150 (163)
5 3gwr_A Putative calcium/calmod 85.9 2.8 9.6E-05 36.8 8.4 103 377-496 8-123 (144)
6 3k7c_A Putative NTF2-like tran 85.3 8.8 0.0003 33.4 11.0 71 403-494 42-112 (114)
7 3a76_A Gamma-hexachlorocyclohe 84.3 3.4 0.00012 37.2 8.3 21 479-499 132-152 (176)
8 3bb9_A Putative orphan protein 84.2 2.3 7.9E-05 36.8 7.0 43 446-495 101-144 (148)
9 3f7s_A Uncharacterized NTF2-li 84.0 2.3 8E-05 36.2 6.8 20 476-495 103-122 (142)
10 2qgu_A Probable signal peptide 80.9 1.4 4.9E-05 41.8 4.6 50 434-498 119-168 (211)
11 2rgq_A Domain of unknown funct 80.8 5.1 0.00018 34.4 7.8 55 437-499 72-126 (144)
12 2chc_A Protein RV3472; hypothe 78.9 4 0.00014 35.9 6.6 48 446-499 83-130 (170)
13 3fka_A Uncharacterized NTF-2 l 78.7 5.7 0.00019 33.8 7.3 44 435-495 71-114 (120)
14 4i4k_A Uncharacterized protein 78.7 6.2 0.00021 34.2 7.7 47 446-498 91-137 (143)
15 3hx8_A MLR2180 protein, putati 78.0 6.8 0.00023 31.9 7.5 44 445-495 75-120 (129)
16 3gzr_A Uncharacterized protein 78.0 5.3 0.00018 35.0 7.1 21 478-498 107-127 (146)
17 2gxf_A Hypothetical protein YY 77.4 3.8 0.00013 35.0 5.9 51 437-494 66-117 (142)
18 2rfr_A Uncharacterized protein 77.2 3 0.0001 35.8 5.2 47 446-498 93-139 (155)
19 3d9r_A Ketosteroid isomerase-l 76.6 7.8 0.00027 31.9 7.5 54 436-496 73-128 (135)
20 3eby_A Beta subunit of A putat 75.8 6.6 0.00023 35.0 7.2 22 478-499 128-149 (163)
21 2b1x_B Naphthalene dioxygenase 75.7 10 0.00034 33.9 8.4 58 437-499 98-157 (172)
22 2ux0_A Calcium-calmodulin depe 74.9 9 0.00031 32.4 7.6 21 476-496 112-132 (143)
23 3blz_A NTF2-like protein of un 74.4 5.8 0.0002 33.6 6.2 43 438-496 78-120 (128)
24 3ejv_A Uncharacterized protein 73.4 18 0.00063 32.7 9.7 20 480-499 152-171 (179)
25 3qk9_A Mitochondrial import in 72.4 28 0.00097 33.3 11.1 98 398-497 99-214 (222)
26 3h51_A Putative calcium/calmod 72.2 12 0.00042 32.4 7.9 51 438-496 84-135 (156)
27 3ef8_A Putative scyalone dehyd 72.1 23 0.00079 30.5 9.7 57 438-499 74-131 (150)
28 3cu3_A Domain of unknown funct 71.1 8.1 0.00028 34.1 6.6 22 477-498 114-135 (172)
29 2gbw_B Biphenyl 2,3-dioxygenas 70.9 9.9 0.00034 34.2 7.2 57 437-499 102-159 (174)
30 3e99_A Benzoate 1,2-dioxygenas 70.8 9.1 0.00031 34.7 6.9 56 437-499 93-149 (164)
31 3duk_A NTF2-like protein of un 70.2 9.3 0.00032 32.7 6.5 44 437-496 76-119 (125)
32 3gzx_B Biphenyl dioxygenase su 68.6 17 0.0006 33.5 8.5 57 437-499 111-171 (186)
33 2r4i_A Uncharacterized protein 63.9 18 0.00061 29.2 6.8 22 477-498 98-119 (123)
34 3cnx_A Uncharacterized protein 61.1 18 0.0006 33.1 6.8 19 478-496 133-151 (170)
35 2rsx_A Uncharacterized protein 59.5 14 0.00048 33.9 5.7 48 435-497 109-156 (159)
36 2f86_B Hypothetical protein K1 59.2 24 0.00083 30.9 7.2 21 476-496 108-128 (143)
37 3ma5_A Tetratricopeptide repea 58.7 12 0.00042 29.3 4.8 58 54-133 8-65 (100)
38 3rob_A Uncharacterized conserv 56.2 36 0.0012 29.5 7.8 52 437-495 79-131 (139)
39 3hzp_A NTF2-like protein of un 54.7 37 0.0013 30.1 7.3 52 437-496 66-117 (131)
40 3gyz_A Chaperone protein IPGC; 54.7 21 0.00072 31.0 6.0 58 54-133 37-94 (151)
41 1uli_B Biphenyl dioxygenase sm 53.2 32 0.0011 31.4 7.2 56 437-498 112-171 (187)
42 1wql_B Ethylbenzene dioxygenas 53.1 33 0.0011 31.3 7.3 56 437-498 111-170 (186)
43 2kat_A Uncharacterized protein 49.6 40 0.0014 26.4 6.5 58 54-133 20-77 (115)
44 3k9i_A BH0479 protein; putativ 49.6 20 0.00069 28.5 4.7 44 75-133 42-85 (117)
45 2xcb_A PCRH, regulatory protei 48.4 22 0.00075 29.4 4.9 44 75-133 67-110 (142)
46 2bmo_B Oxygenase-beta NBDO; ni 47.6 49 0.0017 30.6 7.6 55 437-498 119-178 (194)
47 2l6j_A TPR repeat-containing p 47.0 34 0.0012 25.9 5.5 44 75-133 19-62 (111)
48 3qou_A Protein YBBN; thioredox 45.1 93 0.0032 29.1 9.4 83 16-136 96-178 (287)
49 2lni_A Stress-induced-phosphop 45.0 48 0.0016 25.7 6.2 45 74-133 64-108 (133)
50 3fsd_A NTF2-like protein of un 44.6 70 0.0024 26.7 7.6 22 477-498 107-130 (134)
51 2xcb_A PCRH, regulatory protei 42.4 63 0.0022 26.5 6.9 59 53-133 18-76 (142)
52 3gyz_A Chaperone protein IPGC; 42.3 28 0.00094 30.2 4.7 44 75-133 85-128 (151)
53 2vgx_A Chaperone SYCD; alterna 42.2 30 0.001 29.2 4.9 43 76-133 71-113 (148)
54 2kc7_A BFR218_protein; tetratr 41.9 34 0.0012 25.8 4.7 43 76-133 16-59 (99)
55 1na3_A Designed protein CTPR2; 40.4 40 0.0014 24.5 4.8 44 75-133 24-67 (91)
56 3sz7_A HSC70 cochaperone (SGT) 39.6 34 0.0012 28.7 4.8 44 75-133 26-69 (164)
57 3b7c_A Uncharacterized protein 38.2 19 0.00064 29.9 2.8 18 479-496 101-118 (122)
58 3upv_A Heat shock protein STI1 37.7 41 0.0014 26.6 4.8 57 55-133 40-96 (126)
59 3sz7_A HSC70 cochaperone (SGT) 36.7 40 0.0014 28.2 4.8 57 55-133 47-103 (164)
60 2lni_A Stress-induced-phosphop 36.4 35 0.0012 26.5 4.1 59 53-133 16-74 (133)
61 2dba_A Smooth muscle cell asso 36.3 48 0.0016 26.3 5.0 44 75-133 80-123 (148)
62 1hxi_A PEX5, peroxisome target 35.2 82 0.0028 25.4 6.4 57 55-133 19-75 (121)
63 1na0_A Designed protein CTPR3; 33.8 59 0.002 24.5 5.0 44 75-133 24-67 (125)
64 2rcd_A Uncharacterized protein 33.4 25 0.00087 29.3 2.9 19 479-497 105-123 (129)
65 1elr_A TPR2A-domain of HOP; HO 33.3 57 0.002 24.9 4.9 44 75-133 19-62 (131)
66 2xev_A YBGF; tetratricopeptide 33.3 58 0.002 25.4 5.0 60 55-133 41-100 (129)
67 3upv_A Heat shock protein STI1 33.1 54 0.0018 25.9 4.8 44 75-133 19-62 (126)
68 2kck_A TPR repeat; tetratricop 32.8 55 0.0019 24.3 4.6 47 75-134 55-102 (112)
69 1elw_A TPR1-domain of HOP; HOP 32.7 57 0.002 24.4 4.7 44 75-133 19-62 (118)
70 1pc2_A Mitochondria fission pr 32.1 92 0.0031 28.0 6.5 66 51-133 30-95 (152)
71 1nzn_A CGI-135 protein, fissio 31.5 98 0.0033 27.0 6.4 63 53-132 35-97 (126)
72 3q49_B STIP1 homology and U bo 31.4 60 0.002 25.6 4.8 57 55-133 45-101 (137)
73 4gco_A Protein STI-1; structur 30.7 1.1E+02 0.0036 25.0 6.4 57 55-133 49-105 (126)
74 2dba_A Smooth muscle cell asso 30.6 94 0.0032 24.5 5.9 47 75-133 43-89 (148)
75 4eqf_A PEX5-related protein; a 30.2 1.1E+02 0.0037 28.8 7.2 69 43-133 55-123 (365)
76 3q49_B STIP1 homology and U bo 29.9 66 0.0023 25.4 4.8 59 53-133 9-67 (137)
77 2vgx_A Chaperone SYCD; alterna 29.4 56 0.0019 27.5 4.5 59 53-133 21-79 (148)
78 1a17_A Serine/threonine protei 29.3 90 0.0031 25.2 5.7 61 58-133 11-71 (166)
79 2vyi_A SGTA protein; chaperone 29.3 72 0.0025 24.2 4.8 44 75-133 27-70 (131)
80 3ke7_A Putative ketosteroid is 28.5 1.4E+02 0.0046 25.9 6.9 20 476-495 104-124 (134)
81 1idp_A Scytalone dehydratase; 28.3 1.8E+02 0.0062 26.3 8.0 52 447-498 97-149 (172)
82 1hxi_A PEX5, peroxisome target 28.1 43 0.0015 27.2 3.4 59 53-133 51-109 (121)
83 4gcn_A Protein STI-1; structur 27.8 87 0.003 25.4 5.3 63 56-133 4-66 (127)
84 3ub1_A ORF13-like protein; NTF 26.8 82 0.0028 30.8 5.6 52 437-499 197-249 (261)
85 2pl2_A Hypothetical conserved 26.7 1.5E+02 0.005 26.2 7.0 58 54-133 6-63 (217)
86 2vyi_A SGTA protein; chaperone 26.1 89 0.003 23.7 4.8 43 76-133 62-104 (131)
87 3qky_A Outer membrane assembly 25.9 1.9E+02 0.0064 25.9 7.7 62 53-133 15-76 (261)
88 1y12_A Hypothetical protein PA 25.6 2.1E+02 0.0071 25.6 7.8 58 426-485 98-160 (165)
89 2fo7_A Synthetic consensus TPR 25.3 1.2E+02 0.004 22.9 5.4 22 111-132 71-92 (136)
90 2kck_A TPR repeat; tetratricop 25.3 99 0.0034 22.8 4.9 45 75-134 21-65 (112)
91 2xev_A YBGF; tetratricopeptide 25.0 59 0.002 25.3 3.6 60 55-133 4-63 (129)
92 1elw_A TPR1-domain of HOP; HOP 25.0 82 0.0028 23.4 4.4 59 55-135 40-98 (118)
93 3vtx_A MAMA; tetratricopeptide 25.0 74 0.0025 26.7 4.5 43 76-133 123-165 (184)
94 3jum_A Phenazine biosynthesis 24.8 1.9E+02 0.0066 26.6 7.5 45 444-501 114-158 (185)
95 3mkq_A Coatomer beta'-subunit; 24.7 1E+02 0.0035 32.7 6.4 50 117-175 744-795 (814)
96 1na0_A Designed protein CTPR3; 23.3 1.5E+02 0.0053 22.0 5.7 44 75-133 58-101 (125)
97 3gw4_A Uncharacterized protein 22.6 2.1E+02 0.0071 23.9 7.0 23 111-133 149-171 (203)
98 3cv0_A Peroxisome targeting si 22.3 1.5E+02 0.0051 26.8 6.3 67 45-133 13-79 (327)
99 4i17_A Hypothetical protein; T 22.3 2.3E+02 0.0078 24.6 7.4 59 53-133 42-100 (228)
100 1a17_A Serine/threonine protei 22.0 1.1E+02 0.0037 24.6 4.8 44 75-133 62-105 (166)
101 3kuv_A Fluoroacetyl coenzyme A 21.9 4E+02 0.014 23.2 9.5 92 392-501 24-121 (139)
102 4gco_A Protein STI-1; structur 21.5 1.1E+02 0.0038 24.8 4.8 44 75-133 28-71 (126)
103 1fch_A Peroxisomal targeting s 21.4 2.1E+02 0.0073 26.4 7.3 66 46-133 57-122 (368)
104 3eaa_A EVPC; T6SS, unknown fun 21.1 1.7E+02 0.0059 26.1 6.3 38 425-462 94-134 (163)
105 3rkv_A Putative peptidylprolyl 20.8 98 0.0033 25.7 4.4 43 76-133 79-121 (162)
106 2r5s_A Uncharacterized protein 20.0 1.1E+02 0.0038 25.9 4.6 64 55-140 8-71 (176)
No 1
>2cw9_A Translocase of inner mitochondrial membrane; structure genomics, TIM, structural genomics, NPPFSA, riken structural genomics/proteomics initiative; HET: 1PE; 1.90A {Homo sapiens} SCOP: d.17.4.13
Probab=92.55 E-value=0.76 Score=43.09 Aligned_cols=99 Identities=16% Similarity=0.150 Sum_probs=58.9
Q ss_pred CCCCChhhhhchhHHHHHHHHHHHHHHcCcEEEeeeeeeEEEEEEecC---CCceEEEEEEE--EEeeeEeccCCCccCC
Q 010757 398 HSLGKLPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQ---EGRHAWVEATV--KESARLTDTVHPENCD 472 (502)
Q Consensus 398 h~~~~L~~IL~g~~L~~w~~~a~~l~~~g~y~~Y~l~~l~I~sV~~s~---~~~rA~VeA~V--~E~a~l~~~~~~~~~~ 472 (502)
.+.+.|.+.+++.|+..+....++.+++|..-+-+ .+.|+.+++.. .++.+.|.++. ......+|..+.....
T Consensus 76 gD~~~Lr~~~t~~~~~~~~~~i~~r~~~g~~~~~~--~v~i~~~el~~a~~~~~~~~itV~f~~~~i~~~rd~~G~vveG 153 (194)
T 2cw9_A 76 GELDILKDWCYEATYSQLAHPIQQAKALGLQFHSR--ILDIDNVDLAMGKMVEQGPVLIITFQAQLVMVVRNPKGEVVEG 153 (194)
T ss_dssp TCHHHHHHHBCHHHHHHHHHHHHHHHHTTCEECCE--EEEEEEEEEEEEEEETTEEEEEEEEEEEEECEEECTTSCEEEE
T ss_pred CCHHHHHHhcCHHHHHHHHHHHHHHHHCCCccccE--EEEecccEEEEEEEeCCeeEEEEEEEEEEEEEEECCCCCEecC
Confidence 36678999999999999999999988888765443 33455555321 34544443333 2222235533322222
Q ss_pred CCCcceEEEE--EEEEcCC------ceEeeccce
Q 010757 473 EKISTYTTRY--ELSSTKS------GWRITDGSK 498 (502)
Q Consensus 473 sy~~t~~vrY--~L~r~~g------~WkI~~~~V 498 (502)
+...-.+++| .|.|..+ .|||.+.+-
T Consensus 154 ~~~~~~~v~e~W~f~R~~~~~~p~~~W~L~~iq~ 187 (194)
T 2cw9_A 154 DPDKVLRMLYVWALCRDQDELNPYAAWRLLDISA 187 (194)
T ss_dssp CTTCCEEEEEEEEEEECTTCSCGGGCEEEEEEEE
T ss_pred CCCCceEEEEEEEEEEeCCCCCCCCCEEEEEEcc
Confidence 3334445666 5666544 399998654
No 2
>4gb5_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, snoal-like domain, unknown function; HET: PGE; 1.55A {Kribbella flavida}
Probab=89.07 E-value=0.68 Score=40.67 Aligned_cols=61 Identities=18% Similarity=0.210 Sum_probs=31.8
Q ss_pred EEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 439 DSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 439 ~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
..+.|.-+|+.|++++.+...-.+...............-++.-+++|.+|+|||....+.
T Consensus 80 ~n~~I~vdgD~A~~~~~~~a~~~~~~~~~~~~~~~~~~~G~Y~d~~~r~~g~Wri~~r~~~ 140 (159)
T 4gb5_A 80 TGHVVTIDSDRATIHAHVRAEHWLPAEVAGDGPDRWLVVGFYDNEAVRTADGWRLSSVKLT 140 (159)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEECCHHHHTTSCCEEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCceEEEcCCEEEEEEEEEEEEeeccccCCCCceEEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 3333333678899888774332221111111101111122445568889999999987654
No 3
>3soy_A NTF2-like superfamily protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.00A {Salmonella enterica subsp}
Probab=88.81 E-value=0.56 Score=41.39 Aligned_cols=57 Identities=21% Similarity=0.256 Sum_probs=35.7
Q ss_pred eeeEEEEEE-ecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEE-cCCceEeec
Q 010757 434 LNLTIDSVT-LSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRITD 495 (502)
Q Consensus 434 ~~l~I~sV~-~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r-~~g~WkI~~ 495 (502)
..+.+..++ +...|+-|.|....+.....-++|++.. ...++++.++| .+|+|||..
T Consensus 72 ~~~~~~~~~~I~v~gd~A~v~~~~~~~~~~~~~G~~~~-----~~~r~T~V~~r~~~ggWkIvh 130 (145)
T 3soy_A 72 RTLKLDAPPAIHVYGNAAVAEFDWHFTAVRRDNGQTQH-----TTGRESQVWAKIPNTGWRIVH 130 (145)
T ss_dssp EEEEESSCCEEEEETTEEEEEEEEEEEEEETTTCCEEE-----EEEEEEEEEEEETTTEEEEEE
T ss_pred cceEEeeeeEEEEcCCEEEEEEEEEEEEEEcCCCCeee-----eEEEEEEEEEEcCCCCEEEEE
Confidence 344555554 3345777887666666655544443333 35678888889 569999974
No 4
>3b8l_A Uncharacterized protein; putative aromatic ring hydroxylase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.75A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=86.46 E-value=3 Score=36.48 Aligned_cols=48 Identities=21% Similarity=0.153 Sum_probs=29.1
Q ss_pred CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 446 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 446 ~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
+|+.|++.+.+.- .... +.... . ....+.++.|+|.+|+|||..-.+.
T Consensus 103 ~gd~A~~~~~~~~--~~~~-~~g~~--~-~~~g~y~d~~~r~dg~WrI~~r~~~ 150 (163)
T 3b8l_A 103 EGDTASMRAYVIG--MGVG-KDGRA--V-TVNGRYFFEVRRTEKGWKATRYTMD 150 (163)
T ss_dssp CSSEEEEEEEEEE--EEEE-TTSCE--E-EEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred CCCEEEEEEEEEE--EEEc-CCCCe--E-EEEEEEEEEEEEeCCEEEEEEEEEE
Confidence 5788888776643 1122 11111 1 1234677788899999999976553
No 5
>3gwr_A Putative calcium/calmodulin-dependent protein KIN II association domain; YP_315894.1; HET: MSE PG4; 2.01A {Thiobacillus denitrificans atcc 25259}
Probab=85.88 E-value=2.8 Score=36.84 Aligned_cols=103 Identities=15% Similarity=0.202 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHH--------HHhcCCCCCC---CChhhhhch--hHHHHHHHHHHHHHHcCcEEEeeeeeeEEEEEEe
Q 010757 377 RLAEDIVRKWQNIK--------SQAFGPDHSL---GKLPEVLDG--QMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTL 443 (502)
Q Consensus 377 ~~A~~lVq~Wl~aK--------a~AlGp~h~~---~~L~~IL~g--~~L~~w~~~a~~l~~~g~y~~Y~l~~l~I~sV~~ 443 (502)
+.++++++.|.++= .+.+.++..+ ..--..+.| ....-|+..-+ ++-+ .++++..+++
T Consensus 8 ~~~~~~~~af~~A~~~gD~da~~al~a~d~~v~~v~p~g~~l~G~~ai~~~w~~~f~----~~~~-----~~i~~~~v~v 78 (144)
T 3gwr_A 8 PTPEAAEDAFYAAFEARSLDDMMAVWARDDHVACIHPLAAPLNGRAAVAAGWRSMFG----AAGR-----FRLQVKAVHE 78 (144)
T ss_dssp SSHHHHHHHHHHHHHHTCHHHHHHHBCSSSCCEEECTTCCCEESHHHHHHHHHHHHH----HHCC-----EEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHcCCHHHHHhhccCCCCEEEECCCCCCcccHHHHHHHHHHHHc----CCCc-----EEEEEEEEEE
Confidence 44666677776542 2345555322 222234554 34445544332 2222 2345555665
Q ss_pred cCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecc
Q 010757 444 SQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 444 s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~ 496 (502)
..+++-|.+ +..|....-.++ .. . ...++++.+.|.+|+|||...
T Consensus 79 ~~~gd~A~v--~~~e~~~~~~~~--g~--~--~~~r~T~V~~r~~g~Wrivhh 123 (144)
T 3gwr_A 79 IRQADHVIR--IVDEFLTIGDET--AP--R--PAILATNVYRREADGWRMVLH 123 (144)
T ss_dssp EECSSEEEE--EEEEEEEETTCS--SC--C--CCEEEEEEEEECSSSEEEEEE
T ss_pred EecCCEEEE--EEEEEEEecCCC--Cc--e--eeEEEEEEEEEECCEEEEEEE
Confidence 556776766 333443332221 11 1 578999999999999999753
No 6
>3k7c_A Putative NTF2-like transpeptidase; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: PGE; 2.00A {Campylobacter jejuni}
Probab=85.33 E-value=8.8 Score=33.35 Aligned_cols=71 Identities=13% Similarity=0.201 Sum_probs=41.9
Q ss_pred hhhhhchhHHHHHHHHHHHHHHcCcEEEeeeeeeEEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEE
Q 010757 403 LPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRY 482 (502)
Q Consensus 403 L~~IL~g~~L~~w~~~a~~l~~~g~y~~Y~l~~l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY 482 (502)
..+...|.+-.---.-....+..|---. ++|.. .+.++++|.|.++|+ |.||.. =+.+=
T Consensus 42 ~~e~~~gki~m~~~~~~~~~ekkGGi~~-----I~~~~--~~~d~~~A~V~v~v~-----~knG~t---------~~~~i 100 (114)
T 3k7c_A 42 EKTFVSDKITQVVAENAAKAKRMGGVKD-----IQIEE--KTINKDSAKIRVLVL-----FNNDNN---------QSSNV 100 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSEEE-----EEEEE--EEECSSEEEEEEEEE-----ETTSCE---------EEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcce-----EEEEE--eeccCCEEEEEEEEE-----ECCCCc---------cccce
Confidence 3444445444333333344455665433 23333 233899999999994 655432 23677
Q ss_pred EEEEcCCceEee
Q 010757 483 ELSSTKSGWRIT 494 (502)
Q Consensus 483 ~L~r~~g~WkI~ 494 (502)
.|+..+|.|||.
T Consensus 101 ~LiK~dG~WkV~ 112 (114)
T 3k7c_A 101 FLAKKDRKWLVL 112 (114)
T ss_dssp EEEESSSSEEEC
T ss_pred eeEEeCCeEEEE
Confidence 899999999975
No 7
>3a76_A Gamma-hexachlorocyclohexane dehydrochlorinase; barrel fold, lyase, detoxification; HET: SPD; 2.25A {Sphingomonas paucimobilis}
Probab=84.28 E-value=3.4 Score=37.16 Aligned_cols=21 Identities=10% Similarity=0.226 Sum_probs=16.8
Q ss_pred EEEEEEEEcCCceEeecccee
Q 010757 479 TTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 479 ~vrY~L~r~~g~WkI~~~~Vi 499 (502)
++++.|+|.+|+|||..-.++
T Consensus 132 ry~d~l~r~dg~WrI~~r~~~ 152 (176)
T 3a76_A 132 VFTDEYERRDGVWKFSKRNAC 152 (176)
T ss_dssp EEEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEEECCEEEEEEEEEE
Confidence 566678899999999987654
No 8
>3bb9_A Putative orphan protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: d.17.4.16
Probab=84.21 E-value=2.3 Score=36.80 Aligned_cols=43 Identities=16% Similarity=0.110 Sum_probs=25.1
Q ss_pred CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEE-EEcCCceEeec
Q 010757 446 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYEL-SSTKSGWRITD 495 (502)
Q Consensus 446 ~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L-~r~~g~WkI~~ 495 (502)
+|+.|.+..+.... ....|.+ .....+.++.| +|.+|+|||..
T Consensus 101 ~gd~A~~~~~~~~~--~~~~G~~-----~~~~~r~T~v~~~k~~g~WkIvh 144 (148)
T 3bb9_A 101 TGDIAISTSISHAQ--GEYKGKS-----IDSMTMETLVLIKQADGRWKITH 144 (148)
T ss_dssp ETTEEEEEEEEEEE--ECCC--C-----EEEEEEEEEEEEECTTSCEEEEE
T ss_pred cCCEEEEEEEEEEe--eeeCCcc-----cccceEEEEEEeEEcCCcEEEEE
Confidence 46677775544322 2222221 22456778888 88899999975
No 9
>3f7s_A Uncharacterized NTF2-like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; 2.11A {Pseudomonas putida KT2440}
Probab=83.98 E-value=2.3 Score=36.18 Aligned_cols=20 Identities=5% Similarity=0.215 Sum_probs=16.1
Q ss_pred cceEEEEEEEEcCCceEeec
Q 010757 476 STYTTRYELSSTKSGWRITD 495 (502)
Q Consensus 476 ~t~~vrY~L~r~~g~WkI~~ 495 (502)
..++.++.+.|.+|+|||..
T Consensus 103 ~~~r~T~v~~r~~g~W~ivh 122 (142)
T 3f7s_A 103 GFMRATVGYRRQGGQWQVIH 122 (142)
T ss_dssp EEEEEEEEEEEETTEEEEEE
T ss_pred eeeEEEEEEEEeCCEEEEEE
Confidence 45677777999999999964
No 10
>2qgu_A Probable signal peptide protein; NESG, RSR89, Q8XV73, structural genomics, PSI-2, protein STR initiative; HET: MSE PEF; 1.50A {Ralstonia solanacearum}
Probab=80.89 E-value=1.4 Score=41.77 Aligned_cols=50 Identities=14% Similarity=0.310 Sum_probs=33.4
Q ss_pred eeeEEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeeccce
Q 010757 434 LNLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 434 ~~l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~V 498 (502)
.+++|...+...+++++.|..+| .++| ..+.|.|.|.+.+|+|||.|..|
T Consensus 119 q~i~v~~~~~~~~~~~~~V~t~i------~~~g---------~~i~v~y~l~~~~g~WkvyDv~i 168 (211)
T 2qgu_A 119 QTVAYKPFRAAADDTDVVVRSTV------NNNG---------EPVALDYRVEKSPNGWKVYDINI 168 (211)
T ss_dssp CEEEECCCCSCTTCSEEEEEEEE------EETT---------EEEEEEEEEEEETTEEEEEEEEE
T ss_pred CeEEEeccccCCCCCeEEEEEEE------EeCC---------CeEEEEEEEEEcCCceEEEEEEE
Confidence 44455555433456678886666 2222 23579999998899999998865
No 11
>2rgq_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.80A {Nostoc punctiforme} SCOP: d.17.4.25
Probab=80.80 E-value=5.1 Score=34.42 Aligned_cols=55 Identities=5% Similarity=0.064 Sum_probs=30.8
Q ss_pred EEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 437 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
.|..+.|..+++.|+++..+. ++.... . .....-+.++.|+|.+|+|||..-.++
T Consensus 72 ~i~n~~i~~~~d~a~~~~~~~----~~~~~~--~--~~~~~g~y~d~~~r~dg~Wri~~r~~~ 126 (144)
T 2rgq_A 72 CSSNAIIQGNYDEATMESYLT----VVNRED--L--NRAGSAFVKDQVRKINGKWYLILRQIE 126 (144)
T ss_dssp EEEEEEEEECSSEEEEEEEEE----EEESSS--S--CEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred ecCCeEEEEeCCEEEEEEEEE----EEEecC--C--eEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 355555544555666654442 232211 1 111223566688899999999986653
No 12
>2chc_A Protein RV3472; hypothetical protein; 1.69A {Mycobacterium tuberculosis} SCOP: d.17.4.25
Probab=78.86 E-value=4 Score=35.93 Aligned_cols=48 Identities=15% Similarity=0.119 Sum_probs=28.2
Q ss_pred CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 446 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 446 ~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
+|+.|++.+.+. .......+. .....-+.++.|+|.+|+|||..-.+.
T Consensus 83 ~gd~A~~~~~~~--~~~~~~~g~----~~~~~g~y~d~~~r~dg~Wri~~r~~~ 130 (170)
T 2chc_A 83 DGDVATGRSASV--VTLATAAGY----KILGSGEYQDRLIKQDGQWRIAYRRLR 130 (170)
T ss_dssp ETTEEEEEEEEE--EEEEETTEE----EEEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred eCCEEEEEEEEE--EEEEcCCCC----EEEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 467888877662 112211111 111233567778899999999987654
No 13
>3fka_A Uncharacterized NTF-2 like protein; structural genomics, joint center for STR genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.69A {Silicibacter pomeroyi dss-3}
Probab=78.72 E-value=5.7 Score=33.80 Aligned_cols=44 Identities=18% Similarity=0.237 Sum_probs=30.5
Q ss_pred eeEEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeec
Q 010757 435 NLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITD 495 (502)
Q Consensus 435 ~l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~ 495 (502)
+.+|.+|++. |+.|.+++.+. +. ...|+=.+.|.|.+|+|||.+
T Consensus 71 ~~~i~~I~i~--gd~A~a~v~~~-----~~----------~~~f~D~~~L~k~dg~WkIv~ 114 (120)
T 3fka_A 71 FWAISSVSVQ--GDIAMLHVEND-----WA----------GMRFDDFLTVLLHEGSWRIVS 114 (120)
T ss_dssp CEEEEEEEEE--TTEEEEEEEEE-----ET----------TEEEEEEEEEEEETTEEEEEE
T ss_pred eEEEEEEEEE--CCEEEEEEEEE-----cC----------CCceEEEEEEEEeCCEEEEEE
Confidence 3367777764 47788877742 21 124567789999999999985
No 14
>4i4k_A Uncharacterized protein SGCJ; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: CIT PG4 1PE; 1.70A {Streptomyces globisporus}
Probab=78.66 E-value=6.2 Score=34.17 Aligned_cols=47 Identities=11% Similarity=0.112 Sum_probs=27.8
Q ss_pred CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeeccce
Q 010757 446 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 446 ~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~V 498 (502)
+++.|.|. .+ ..++..|.... ......+.+|.++|.+|+|||...++
T Consensus 91 ~~d~A~v~---~~-~~~~~~g~~~~--~~~~~~~~T~v~~r~~g~WrI~~~h~ 137 (143)
T 4i4k_A 91 GDGIALLI---TE-GGILAPGETEA--SGDGAVRASWLAVEQDGQWRLAAYQN 137 (143)
T ss_dssp ETTEEEEE---EE-EEEECTTCSSC--CGGGEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCCEEEEE---ec-cceecCCCCCC--CcccceEEEEEEEEECCcEEEEEecC
Confidence 56777774 22 22333332221 11234467889999999999987654
No 15
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=78.04 E-value=6.8 Score=31.94 Aligned_cols=44 Identities=9% Similarity=0.132 Sum_probs=24.3
Q ss_pred CCCceEEEEEEEEEeeeEe-ccCCCccCCCCCcceEEEEEEEEc-CCceEeec
Q 010757 445 QEGRHAWVEATVKESARLT-DTVHPENCDEKISTYTTRYELSST-KSGWRITD 495 (502)
Q Consensus 445 ~~~~rA~VeA~V~E~a~l~-~~~~~~~~~sy~~t~~vrY~L~r~-~g~WkI~~ 495 (502)
.+|+.|.+....+-. .. .+|.+ .....+....++|. +|+|||..
T Consensus 75 ~~gd~A~~~~~~~~~--~~~~~G~~-----~~~~g~~~~v~~r~~dG~W~i~~ 120 (129)
T 3hx8_A 75 ESGDFAFESGSFSLK--APGKDSKL-----VDAAGKYVVVWRKGQDGGWKLYR 120 (129)
T ss_dssp EETTEEEEEEEEEEE--EECTTSCE-----EEEEEEEEEEEEECTTSCEEEEE
T ss_pred cCCCEEEEEEEEEEE--eeCCCCCe-----eeeeEEEEEEEEECCCCcEEEEE
Confidence 457788876655333 22 11211 11123455566788 89999863
No 16
>3gzr_A Uncharacterized protein with A NTF2-like fold; structural genomics, joint center for struct genomics, JCSG, protein structure initiative; HET: MSE GOL; 1.40A {Caulobacter vibrioides}
Probab=78.01 E-value=5.3 Score=35.00 Aligned_cols=21 Identities=14% Similarity=0.251 Sum_probs=17.4
Q ss_pred eEEEEEEEEcCCceEeeccce
Q 010757 478 YTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 478 ~~vrY~L~r~~g~WkI~~~~V 498 (502)
.+.+|.|+|.+|+|||...++
T Consensus 107 ~~~t~v~vr~dg~WrI~a~h~ 127 (146)
T 3gzr_A 107 DRLTLLAVEREGVWRFIHGHN 127 (146)
T ss_dssp EEEEEEEEEETTEEEEEEEEE
T ss_pred cEEEEEEEEECCEEEEEEEec
Confidence 357789999999999987665
No 17
>2gxf_A Hypothetical protein YYBH; alpha-beta protein., structural genomics, PSI, protein structure initiative; HET: MES; 3.10A {Bacillus subtilis} SCOP: d.17.4.22
Probab=77.36 E-value=3.8 Score=35.02 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=25.3
Q ss_pred EEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEE-cCCceEee
Q 010757 437 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRIT 494 (502)
Q Consensus 437 ~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r-~~g~WkI~ 494 (502)
++..+++..+|+.|.+.+..+-. ...+|. ......+.+++++| .+|+|||.
T Consensus 66 ~~~~~~v~~~gd~A~~~~~~~~~--~~~~G~-----~~~~~g~~t~v~~r~~dG~Wri~ 117 (142)
T 2gxf_A 66 TQGKMILLEAGDTVLVLSQTLLD--SDKKDS-----EYAMERRATYVFKKNAQGEWLCV 117 (142)
T ss_dssp EEEEEEEEEETTEEEEEEEEECC--C--------------EEEEEEEEEECTTSCEEEE
T ss_pred EEEEEEEEEcCCEEEEEEEEEEE--ECCCCC-----eEeeeEEEEEEEEECCCCCEEEE
Confidence 34445544467777764443211 111111 12234466788888 47899985
No 18
>2rfr_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.16A {Novosphingobium aromaticivorans} SCOP: d.17.4.28
Probab=77.16 E-value=3 Score=35.84 Aligned_cols=47 Identities=17% Similarity=0.213 Sum_probs=26.4
Q ss_pred CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeeccce
Q 010757 446 EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 446 ~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~V 498 (502)
+|+.|++.+.+. ...+..++ .. .+ ..-+.++.|+|.+|+|||..-.+
T Consensus 93 ~gd~A~~~~~~~--~~~~~~~~-~~--~~-~~g~y~d~~~r~~g~Wri~~r~~ 139 (155)
T 2rfr_A 93 EGDTATARCHSV--VFRCVSGT-FG--SH-RVSANRWTFRRTPAGWRAVRREN 139 (155)
T ss_dssp ETTEEEEEEEEE--EEEEETTE-EE--EE-EEEEEEEEEEEETTEEEEEEEEE
T ss_pred eCCEEEEEEEEE--EEEEcCCC-ce--EE-EeeeeEEEEEECCCEEEEEEEEE
Confidence 367888766552 22222221 11 11 12235568899999999998544
No 19
>3d9r_A Ketosteroid isomerase-like protein; YP_049581.1, structural joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 2.40A {Pectobacterium atrosepticum} SCOP: d.17.4.27
Probab=76.62 E-value=7.8 Score=31.95 Aligned_cols=54 Identities=15% Similarity=0.262 Sum_probs=29.3
Q ss_pred eEEEEEEecCCCceEEEEEEEEEeeeEecc-CCCccCCCCCcceEEEEEEEEc-CCceEeecc
Q 010757 436 LTIDSVTLSQEGRHAWVEATVKESARLTDT-VHPENCDEKISTYTTRYELSST-KSGWRITDG 496 (502)
Q Consensus 436 l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~-~~~~~~~sy~~t~~vrY~L~r~-~g~WkI~~~ 496 (502)
++|..+.+. +|+.|.+..... ...... ++. .....++..+.++|+ +|+|||..-
T Consensus 73 ~~~~~i~~~-~gd~a~~~~~~~--~~~~~~~~g~----~~~~~~~~~~v~~~~~dG~W~i~~~ 128 (135)
T 3d9r_A 73 YEIKEVVQT-SADWAFVRSATE--GTETNKATGV----VTPAAYQELFLLRKSATGSWQTARY 128 (135)
T ss_dssp EEEEEEEEE-ETTEEEEEEEEE--EEEEETTTCC----EEEEEEEEEEEEEECTTSCEEEEEE
T ss_pred EEEEEEEEe-cCCEEEEEEEEE--EEEecCCCCC----ceeecccEEEEEEecCCCcEEEEEE
Confidence 355555542 467777655442 222221 111 112345566677887 899999754
No 20
>3eby_A Beta subunit of A putative aromatic-ring-hydroxyl dioxygenase; YP_001165631.1; 1.75A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.4
Probab=75.80 E-value=6.6 Score=35.02 Aligned_cols=22 Identities=9% Similarity=-0.041 Sum_probs=18.0
Q ss_pred eEEEEEEEEcCCceEeecccee
Q 010757 478 YTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 478 ~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
-+.++.|+|.+|+|||..=.|+
T Consensus 128 G~y~D~l~r~~~gwri~~R~v~ 149 (163)
T 3eby_A 128 GKYVDRFDLSGGTVRLKSRTCI 149 (163)
T ss_dssp EEEEEEEECCTTCCEEEEEEEE
T ss_pred EEEEEEEEEECCEEEEEEEEEE
Confidence 3678999999999999976553
No 21
>2b1x_B Naphthalene dioxygenase small subunit; rieske non-heme iron oxygenase, oxidoreductase; 2.00A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 2b24_B
Probab=75.71 E-value=10 Score=33.89 Aligned_cols=58 Identities=9% Similarity=-0.009 Sum_probs=32.7
Q ss_pred EEEEEEecC-C-CceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 437 TIDSVTLSQ-E-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~-~-~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
-|..+.|.. + ++.|++++.+.-- ....+++.. ..+ .-+..+.|+|.+|+|||..-.|+
T Consensus 98 ~i~n~~I~~~~~~d~a~~~s~~~~~--~~~~~~~~~-~~~--~G~y~D~l~r~~g~Wri~~R~v~ 157 (172)
T 2b1x_B 98 FVTNVRVATGDSEDEFKVTSNLLLY--RTRGDVATY-DVL--SGERTDVLRRAGDSFLMAKRVVL 157 (172)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEEEE--EECTTCSCC-EEE--EEEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCEEEEEecCCCEEEEEEEEEEE--EEcCCCCce-EEE--EEEEEEEEEEcCCEEEEEEEEEE
Confidence 455555533 3 3788877654211 112222111 122 34678888999999999976653
No 22
>2ux0_A Calcium-calmodulin dependent protein kinase (CAM II gamma; transferase, oligomerisation DOM serine- threonine kinase, ATP-binding; 2.46A {Homo sapiens} SCOP: d.17.4.7 PDB: 2w2c_A 1hkx_A*
Probab=74.89 E-value=9 Score=32.44 Aligned_cols=21 Identities=10% Similarity=0.007 Sum_probs=16.8
Q ss_pred cceEEEEEEEEcCCceEeecc
Q 010757 476 STYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 476 ~t~~vrY~L~r~~g~WkI~~~ 496 (502)
..++.++.+.|.+|+|||...
T Consensus 112 ~~~r~T~v~~k~~g~Wkivh~ 132 (143)
T 2ux0_A 112 SQSEETRVWHRRDGKWLNVHY 132 (143)
T ss_dssp EEEEEEEEEEEETTEEEEEEE
T ss_pred eeEEEEEEEEEECCEEEEEEE
Confidence 346788899999999999754
No 23
>3blz_A NTF2-like protein of unknown function; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.75A {Shewanella baltica} SCOP: d.17.4.14
Probab=74.41 E-value=5.8 Score=33.55 Aligned_cols=43 Identities=14% Similarity=0.243 Sum_probs=28.3
Q ss_pred EEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecc
Q 010757 438 IDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 438 I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~ 496 (502)
|.+|++. |+.|.+++... .+. ...|.-.++|+|.+|+|||..-
T Consensus 78 i~~i~i~--gd~A~a~~~~~----~~~----------~~~~~d~~~l~k~dg~WkI~~~ 120 (128)
T 3blz_A 78 IARIDIV--GTAASARIDTD----DIS----------GFRFTDFFNLLKVEGKWTVVSK 120 (128)
T ss_dssp EEEEEEE--TTEEEEEEEEE----EET----------TEEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEE--CCEEEEEEEEE----EcC----------CCceEEeEEEEEECCEEEEEEE
Confidence 6667654 47788877763 121 1234446689999999999754
No 24
>3ejv_A Uncharacterized protein with cystatin-like fold; structural genomics, joint center for ST genomics, JCSG; HET: MSE PGE; 1.40A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID} SCOP: d.17.4.28
Probab=73.38 E-value=18 Score=32.74 Aligned_cols=20 Identities=25% Similarity=0.395 Sum_probs=15.3
Q ss_pred EEEEEEEcCCceEeecccee
Q 010757 480 TRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 480 vrY~L~r~~g~WkI~~~~Vi 499 (502)
+.-.++|.+|+|||+...+.
T Consensus 152 Y~D~~~R~dg~Wri~~r~~~ 171 (179)
T 3ejv_A 152 YRLTLRTVADGWVISAMRIE 171 (179)
T ss_dssp EEEEEEEETTEEEEEEEEEE
T ss_pred EEEEEEEECCeEEEEEEEEE
Confidence 45566788999999987653
No 25
>3qk9_A Mitochondrial import inner membrane translocase S TIM44; mitochondrion, protein transport; 3.10A {Saccharomyces cerevisiae} PDB: 2fxt_A
Probab=72.44 E-value=28 Score=33.33 Aligned_cols=98 Identities=11% Similarity=0.118 Sum_probs=63.9
Q ss_pred CCCCChhhhhchhHHHHHHHHHHHHHHcCcEEEeeeeeeEEEEEEecC---C--CceEEEEEEE--EEeeeEec-cCCCc
Q 010757 398 HSLGKLPEVLDGQMLKVWTDRASEIAQLGWTYDYSLLNLTIDSVTLSQ---E--GRHAWVEATV--KESARLTD-TVHPE 469 (502)
Q Consensus 398 h~~~~L~~IL~g~~L~~w~~~a~~l~~~g~y~~Y~l~~l~I~sV~~s~---~--~~rA~VeA~V--~E~a~l~~-~~~~~ 469 (502)
.+.+.|...|++.+++......++.+++|...+-. -|.|+.|++.. . ++.+.|.++. .+...+.| ..+..
T Consensus 99 GD~~~Lk~llse~~y~~f~~~i~~r~~~G~~~d~~--il~I~~vdI~~a~~~~~~~~p~itV~f~aq~i~~~rd~k~GeV 176 (222)
T 3qk9_A 99 GDVKVLKKWFSEAPFNVYAAQQKIFKEQDVYADGR--ILDIRGVEIVSAKLLAPQDIPVLVVGCRAQEINLYRKKKTGEI 176 (222)
T ss_dssp TCHHHHHHHBCHHHHHHHHHHHHHHHTTTEEECCE--EEEEEEEEEEEEEECSSSCCEEEEEEEEEEEECCEEESTTCCC
T ss_pred CCHHHHHhhcCHHHHHHHHHHHHHHHHCCCEeeee--EeeecceEEEEEEEecCCCceEEEEEEEEEEEEEEEeCCCCcc
Confidence 45678999999999999999999999999876654 45788888632 2 4566665553 23333335 23333
Q ss_pred cCCCCCcceEEEEEEEE--cC--------CceEeeccc
Q 010757 470 NCDEKISTYTTRYELSS--TK--------SGWRITDGS 497 (502)
Q Consensus 470 ~~~sy~~t~~vrY~L~r--~~--------g~WkI~~~~ 497 (502)
...+...-.++.|.... +. ..||+.+.+
T Consensus 177 VeGd~d~i~~~~~~WtF~R~~~~~d~~~tp~WkL~eiq 214 (222)
T 3qk9_A 177 AAGDEANILMSSYAMVFTRDPEQIDDDETEGWKILEFV 214 (222)
T ss_dssp SSSCTTCCEEEEEEEEEEECCC--------CEEEEEEE
T ss_pred ccCCCCCceEEEEEEEEEEcCccCCCCCCCCcEEehhh
Confidence 33455555577776554 42 379998765
No 26
>3h51_A Putative calcium/calmodulin dependent protein KIN association domain; NP_636218.1; HET: MSE PG4; 1.70A {Xanthomonas campestris PV}
Probab=72.16 E-value=12 Score=32.36 Aligned_cols=51 Identities=16% Similarity=0.135 Sum_probs=28.7
Q ss_pred EEEEEecCCCceEEEEEEEEEeeeEec-cCCCccCCCCCcceEEEEEEEEcCCceEeecc
Q 010757 438 IDSVTLSQEGRHAWVEATVKESARLTD-TVHPENCDEKISTYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 438 I~sV~~s~~~~rA~VeA~V~E~a~l~~-~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~ 496 (502)
+..|++. +++.|.+.....-. ..+ +|.+ .....+.++.++|.+|+|||...
T Consensus 84 ~~~i~~~-~gd~A~~~~~~~~~--~~~~~G~~-----~~~~~r~t~v~~r~dG~WkIv~~ 135 (156)
T 3h51_A 84 YRTVRLL-DDDSAVDAGVYTFT--LTDKNGKK-----SDVQARYTFVYEKRDGKWLIINH 135 (156)
T ss_dssp EEEEEEC-SSSEEEEEEEEEEE--EECTTSCE-----EEEEEEEEEEEEEETTEEEEEEE
T ss_pred ceEEEEe-cCCeEEEEEEEEEE--EEcCCCCe-----EEEEeEEEEEEEEECCEEEEEEE
Confidence 3344442 67788775554222 221 2211 12344677778888999999754
No 27
>3ef8_A Putative scyalone dehydratase; YP_496742.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE PG4; 1.50A {Novosphingobium aromaticivorans DSM12444} SCOP: d.17.4.28
Probab=72.10 E-value=23 Score=30.55 Aligned_cols=57 Identities=11% Similarity=0.063 Sum_probs=31.4
Q ss_pred EEEEEecC-CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 438 IDSVTLSQ-EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 438 I~sV~~s~-~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
|..+.|.. +++.|++++.+.-. .....+... ....-+++..++|.+|+|||..-.++
T Consensus 74 ~~n~~I~~~gdd~A~~~~~~~~~-~~~~~~~~~----~~~~gry~d~~~r~dg~Wri~~r~~~ 131 (150)
T 3ef8_A 74 NSNICIDFVSETEANVRSVVLAI-HRYTKERPD----GILYGQYFDTVVKVDGQWKFKRRELR 131 (150)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEE-EEESSSSCC----EEEEEEEEEEEEEETTEEEEEEEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEEEEE-EEccCCCCe----EEEEEEEEEEEEEECCEEEEEEEEEE
Confidence 44444433 23678887766322 112222111 11233566678899999999987664
No 28
>3cu3_A Domain of unknown function with A cystatin-like F; structural genomics, joint center for structural genomics, J protein structure initiative; 2.00A {Nostoc punctiforme} SCOP: d.17.4.28
Probab=71.10 E-value=8.1 Score=34.11 Aligned_cols=22 Identities=18% Similarity=0.368 Sum_probs=17.0
Q ss_pred ceEEEEEEEEcCCceEeeccce
Q 010757 477 TYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 477 t~~vrY~L~r~~g~WkI~~~~V 498 (502)
..+.++.++|.+|+|||.....
T Consensus 114 ~~~~t~v~~r~dG~WrI~~~~~ 135 (172)
T 3cu3_A 114 DSLPLYVVTKGDEGWQIEGLLN 135 (172)
T ss_dssp CBCCEEEEEEETTEEEEEEEEC
T ss_pred ceEEEEEEEEeCCeEEEEEEEc
Confidence 3467778888999999987643
No 29
>2gbw_B Biphenyl 2,3-dioxygenase beta subunit; rieske oxygenase, oxidoreductase, non heme iron; 1.70A {Sphingobium yanoikuyae} PDB: 2gbx_B* 2ckf_B
Probab=70.88 E-value=9.9 Score=34.24 Aligned_cols=57 Identities=11% Similarity=0.051 Sum_probs=31.5
Q ss_pred EEEEEEecC-CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 437 TIDSVTLSQ-EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~-~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
-|..+.|.. +++.+++++.+. ..-...++ .. ..+. -+.++.|+|.+|+|||..-.|+
T Consensus 102 ~isN~~i~~~~~~~a~v~s~~~--~~~~~~~~-~~-~~~~--G~y~D~l~r~~~~wri~~R~v~ 159 (174)
T 2gbw_B 102 FVSNVEAFEAGNGELDVLSNIL--VYRNRRQT-EV-TVHT--LGREDKLRRDGNGFKVFRRKLI 159 (174)
T ss_dssp EEEEEEEEEEETTEEEEEEEEE--EEEEETTT-EE-EEEE--EEEEEEEEEETTEEEEEEEEEE
T ss_pred EecCEEEEEcCCCEEEEEEEEE--EEEEcCCC-ce-EEEE--EEEEEEEEEcCCEEEEEEEEEE
Confidence 345555533 466777765431 11111111 11 1222 4678889999999999976653
No 30
>3e99_A Benzoate 1,2-dioxygenase beta subunit; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Burkholderia mallei atcc 23344} SCOP: d.17.4.4
Probab=70.77 E-value=9.1 Score=34.66 Aligned_cols=56 Identities=13% Similarity=0.032 Sum_probs=32.0
Q ss_pred EEEEEEecC-CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 437 TIDSVTLSQ-EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~-~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
-|..|.+.. +++.++|.+.+.=- -+..++ . ..+ .-+.+|.|+|.+|+|||..-.|+
T Consensus 93 ~vsnv~v~~~~~~~~~v~s~~~v~--~~r~~~--~-~~~--~G~~~d~L~r~~~~wri~~R~v~ 149 (164)
T 3e99_A 93 NIANVERESADGDVHTVRFNWHTL--SYRYKT--V-SSY--FGMSRYAIDFSGDAPKIVSKYVV 149 (164)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEE--EEETTE--E-EEE--EEEEEEEEECSSSSCEEEEEEEE
T ss_pred EEeCEEEEEeCCCEEEEEEEEEEE--EECCCC--e-EEE--EEEEEEEEEEECCEEEEEEEEEE
Confidence 355555533 56677776654111 111111 1 122 23688999999999999876553
No 31
>3duk_A NTF2-like protein of unknown function; structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.20A {Methylobacillus flagellatus KT} SCOP: d.17.4.0
Probab=70.22 E-value=9.3 Score=32.66 Aligned_cols=44 Identities=16% Similarity=0.292 Sum_probs=29.8
Q ss_pred EEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecc
Q 010757 437 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 437 ~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~ 496 (502)
+|.++++. |+.|.+++..+ .+. . ..++=.+.|.|.+|+|||.+-
T Consensus 76 ~I~~I~i~--gd~A~a~v~~~----~~~-----~-----~~f~D~l~L~k~dg~WkIv~K 119 (125)
T 3duk_A 76 RITNIDIV--GTVAHARVEAE----NWT-----N-----FKFSDLFLLLKLDGKWTIVNK 119 (125)
T ss_dssp EEEEEEEE--TTEEEEEEEEE----CSS-----S-----CCEEEEEEEEEETTEEEEEEE
T ss_pred eEEEEEEE--CCEEEEEEEEE----EcC-----C-----CeEEEEEEEEEeCCEEEEEEE
Confidence 67788774 57788876442 121 0 234567889999999999853
No 32
>3gzx_B Biphenyl dioxygenase subunit beta; rieskie, non-heme iron, 2Fe-2S, aromatic hydroc catabolism, iron, iron-sulfur, metal-binding, NAD; HET: BNL MES; 1.58A {Comamonas testosteroni} SCOP: d.17.4.4 PDB: 3gzy_B* 2yfi_B 2xr8_B* 2xrx_B* 2xsh_B 2xso_B 2yfj_B* 2yfl_B*
Probab=68.63 E-value=17 Score=33.50 Aligned_cols=57 Identities=14% Similarity=0.072 Sum_probs=33.5
Q ss_pred EEEEEEecC--CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEE-cCC-ceEeecccee
Q 010757 437 TIDSVTLSQ--EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKS-GWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~--~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r-~~g-~WkI~~~~Vi 499 (502)
-|..|.+.. +++.+.|++...=- -+..++ .. ..+. -+.+|.|+| .+| +|||..=.|+
T Consensus 111 ~vsNv~v~~~~~~~~~~vrs~~~v~--~~r~~~-~~-~~~~--G~y~D~L~r~~~g~~wrI~~R~V~ 171 (186)
T 3gzx_B 111 LVSNVIVREMDTPGTLEVASAFLLY--RSRLER-QV-DVFA--GERRDVLRIADNPLGFQIAKRTII 171 (186)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEEEE--EEETTT-EE-EEEE--EEEEEEEEECSSTTSEEEEEEEEE
T ss_pred EEcCEEEEEecCCCEEEEEEEEEEE--EEcCCC-cE-EEEE--EEEEEEEEEcCCCceEEEEEEEEE
Confidence 466666633 47777776655111 111111 11 1222 468999999 888 9999976553
No 33
>2r4i_A Uncharacterized protein; NTF2-like protein, structural genomics, joint center for STR genomics, JCSG; HET: MSE CIT; 1.60A {Cytophaga hutchinsonii atcc 33406} SCOP: d.17.4.15
Probab=63.90 E-value=18 Score=29.23 Aligned_cols=22 Identities=18% Similarity=0.321 Sum_probs=16.1
Q ss_pred ceEEEEEEEEcCCceEeeccce
Q 010757 477 TYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 477 t~~vrY~L~r~~g~WkI~~~~V 498 (502)
..+.+..+.|.+|+|||...+.
T Consensus 98 ~~r~t~vw~r~~g~W~iv~~h~ 119 (123)
T 2r4i_A 98 TFRYLRVWKLFDGNWKVIAGSC 119 (123)
T ss_dssp EEEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEEEEEEEeCCeEEEEEEEE
Confidence 4455667788899999976543
No 34
>3cnx_A Uncharacterized protein; putative dehydratase, NTF2-like protein, structural genomics center for structural genomics, JCSG; HET: MSE PGE PG6; 2.10A {Streptomyces avermitilis} SCOP: d.17.4.17
Probab=61.10 E-value=18 Score=33.11 Aligned_cols=19 Identities=16% Similarity=0.386 Sum_probs=16.4
Q ss_pred eEEEEEEEEcCCceEeecc
Q 010757 478 YTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 478 ~~vrY~L~r~~g~WkI~~~ 496 (502)
++++|.++|.+|+|||...
T Consensus 133 ~raT~Vfrr~~ggWriv~h 151 (170)
T 3cnx_A 133 VVATNVFRRTPDGWKLWSH 151 (170)
T ss_dssp EEEEEEEECCTTCCEEEEE
T ss_pred EEEEEEEEEECCEEEEEEE
Confidence 6789999999999999753
No 35
>2rsx_A Uncharacterized protein YOEB; inhibitor protein, hacksaw-like fold, autolysin inhibitor, D endopeptidase inhibitor, hydrolase inhibitor; NMR {Bacillus subtilis}
Probab=59.47 E-value=14 Score=33.90 Aligned_cols=48 Identities=15% Similarity=0.161 Sum_probs=30.3
Q ss_pred eeEEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeeccc
Q 010757 435 NLTIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGS 497 (502)
Q Consensus 435 ~l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~ 497 (502)
+.+|.+++. +++.+.++.+| .+.+ +.+..++ ..+|+.++|+|||..+.
T Consensus 109 ~akik~~~~--~~nk~~~~~~v-----p~~~------~~~~~~~--kvtf~yE~~~WkIn~~d 156 (159)
T 2rsx_A 109 KSTAKLISK--KGSTITYEFTV-----PTLD------GSPSAKR--KVTFVKENKKWKVNQFD 156 (159)
T ss_dssp GCEEEEEEE--ETTEEEEEEEE-----CBTT------SCCCEEE--EEEEEESSSSEEESCTT
T ss_pred hhheEEEEe--cCCEEEEEEEE-----eeCC------CCceeEE--EEEEEEECCEEEEeecc
Confidence 557777753 45666766665 2322 2333454 44579999999998764
No 36
>2f86_B Hypothetical protein K11E8.1D; UNC-43, oligomerization domain, transferase; 2.64A {Caenorhabditis elegans} SCOP: d.17.4.7
Probab=59.24 E-value=24 Score=30.89 Aligned_cols=21 Identities=10% Similarity=0.077 Sum_probs=17.2
Q ss_pred cceEEEEEEEEcCCceEeecc
Q 010757 476 STYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 476 ~t~~vrY~L~r~~g~WkI~~~ 496 (502)
..++.+..+.|.+|+|||...
T Consensus 108 ~~~r~T~V~~k~~g~WkivH~ 128 (143)
T 2f86_B 108 RQSQESRVWSKKQGRWVCVHV 128 (143)
T ss_dssp EEEEEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEEEEEeCCcEEEEEE
Confidence 467788888899999999754
No 37
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=58.70 E-value=12 Score=29.32 Aligned_cols=58 Identities=14% Similarity=0.123 Sum_probs=41.4
Q ss_pred hHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 54 FEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 54 ~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
...|.-+.++...| -..+|...|++.... .....+.....|.|..-+|+.++|...+.
T Consensus 8 ~~~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 65 (100)
T 3ma5_A 8 FTRYALAQEHLKHD-------NASRALALFEELVET---------------DPDYVGTYYHLGKLYERLDRTDDAIDTYA 65 (100)
T ss_dssp HHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34455555555443 457888888887754 12235788999999999999999999884
No 38
>3rob_A Uncharacterized conserved protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.48A {Planctomyces limnophilus}
Probab=56.20 E-value=36 Score=29.47 Aligned_cols=52 Identities=6% Similarity=0.051 Sum_probs=29.1
Q ss_pred EEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEE-cCCceEeec
Q 010757 437 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSS-TKSGWRITD 495 (502)
Q Consensus 437 ~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r-~~g~WkI~~ 495 (502)
+|..+.+ +|+.|.+........+.-++|.+. ....++.-.+.| .+|.|||.-
T Consensus 79 ~~~~i~v--~GD~A~~~~~~~~~~t~~~~g~~~-----~~~g~~~~v~rK~~dG~W~i~~ 131 (139)
T 3rob_A 79 TFEEIVI--VEPMAYTRTHLHIKVTPRSGGAVR-----ELAGHAMSIFRRSMFGEWQLAR 131 (139)
T ss_dssp EEEEEEE--ETTEEEEEEEEEEEEEETTSCCCE-----EEEEEEEEEEEECTTSCEEEEE
T ss_pred EEEEEEE--cCCeEEEEEEEEEEEecCCCCcee-----EeeccEEEEEEECCCCcEEEEE
Confidence 4444544 477888877665442221222211 123345558888 679999874
No 39
>3hzp_A NTF2-like protein of unknown function; YP_291699.1, structural genomics, joint center structural genomics, JCSG; HET: MSE 1PE; 1.40A {Prochlorococcus marinus}
Probab=54.70 E-value=37 Score=30.10 Aligned_cols=52 Identities=10% Similarity=0.054 Sum_probs=34.0
Q ss_pred EEEEEEecCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecc
Q 010757 437 TIDSVTLSQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDG 496 (502)
Q Consensus 437 ~I~sV~~s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~ 496 (502)
+|..+++..+ +-|.+-.++.+.-++. |.+-. +.+++.=++++.+|+|||.=|
T Consensus 66 ki~~le~~~d-t~A~v~~t~~~kfsYk--G~pne-----d~~~YtrVwKK~d~~WKi~w~ 117 (131)
T 3hzp_A 66 KVHKFELLGS-NAAICVFTLGSKFTYK--GTQND-----DLPTVTSIFKKIDEKWKVAWM 117 (131)
T ss_dssp EEEEEEESSS-SEEEEEEEEEEEEEET--TEEEE-----EBCEEEEEEEEETTEEEEEEE
T ss_pred ceeeEEEcCC-ceEEEEEEecceEEEc--CccCC-----cceeeehhhhhcCCcEEEEEE
Confidence 6677775544 5677777887775554 33333 555566666667899999754
No 40
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=54.69 E-value=21 Score=31.03 Aligned_cols=58 Identities=10% Similarity=0.171 Sum_probs=36.2
Q ss_pred hHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 54 FEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 54 ~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
...|.-++++...| -..+|...|+++... .....+.....|.|..-+|+.++|...+.
T Consensus 37 ~~~~~lg~~~~~~g-------~~~eA~~~~~~al~~---------------~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~ 94 (151)
T 3gyz_A 37 DDIYSYAYDFYNKG-------RIEEAEVFFRFLCIY---------------DFYNVDYIMGLAAIYQIKEQFQQAADLYA 94 (151)
T ss_dssp HHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 34555555554444 356777777777643 12234667777788888888887777763
No 41
>1uli_B Biphenyl dioxygenase small subunit; alpha3 BETA3 hetero hexamer, oxidoreductase; 2.20A {Rhodococcus SP} SCOP: d.17.4.4 PDB: 1ulj_B* 3en1_B* 3eqq_B
Probab=53.17 E-value=32 Score=31.42 Aligned_cols=56 Identities=16% Similarity=0.107 Sum_probs=30.1
Q ss_pred EEEEEEecC-C-CceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCC--ceEeeccce
Q 010757 437 TIDSVTLSQ-E-GRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKS--GWRITDGSK 498 (502)
Q Consensus 437 ~I~sV~~s~-~-~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g--~WkI~~~~V 498 (502)
-|..|.|.. + ++.++|++.+.=- ....++ .. ..+... ..+.|+|.+| +|||..=.|
T Consensus 112 ~isNv~V~~~~~~d~a~vrs~~~~~--~~r~~~-~~-~~~~g~--r~D~l~r~~~~~gwri~~R~v 171 (187)
T 1uli_B 112 VISNVMIVDGEKPGEYHVSSVFIVY--RNRLER-QL-DIFAGE--RKDILRRTGSEAGFELAKRTI 171 (187)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEEEE--EEETTT-EE-EEEEEE--EEEEEEECSSTTCEEEEEEEE
T ss_pred EecCEEEEEeCCCCEEEEEEEEEEE--EEcCCC-ce-EEEEEE--EEEEEEECCCccceEEEEEEE
Confidence 455666533 4 6777776654111 111111 11 122222 3388999998 999997655
No 42
>1wql_B Ethylbenzene dioxygenase small subunit; biphenyl dioxygenase, cumene dioxygenase; 2.20A {Pseudomonas fluorescens} SCOP: d.17.4.4
Probab=53.10 E-value=33 Score=31.33 Aligned_cols=56 Identities=13% Similarity=0.105 Sum_probs=30.1
Q ss_pred EEEEEEecC--CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCC--ceEeeccce
Q 010757 437 TIDSVTLSQ--EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKS--GWRITDGSK 498 (502)
Q Consensus 437 ~I~sV~~s~--~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g--~WkI~~~~V 498 (502)
-|..|.|.. +++.++|++.+.=- .+..++ .. ..+... ..+.|+|.+| +|||..=.|
T Consensus 111 ~isNv~v~~~~~~d~~~v~s~~~~~--~~r~~~-~~-~~~~g~--r~D~l~r~~~~~~wri~~R~v 170 (186)
T 1wql_B 111 IVSNVIVRETESAGTLEVSSAFLCY--RNRLER-MT-DIYVGE--RRDILLRVSDGLGFKIAKRTI 170 (186)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEEEE--EEETTT-EE-EEEEEE--EEEEEEECSSTTSEEEEEEEE
T ss_pred EecCEEEEEecCCCEEEEEEEEEEE--EEcCCC-ce-EEEEEE--EEEEEEECCCccceEEEEEEE
Confidence 455666533 36777776654111 111111 11 122222 3388999998 999997655
No 43
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=49.64 E-value=40 Score=26.36 Aligned_cols=58 Identities=7% Similarity=-0.131 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 54 FEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 54 ~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
...|.-+.++...| -..+|...|++.... .....+.....|.|+..+|+.++|...+.
T Consensus 20 ~~~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~la~~~~~~g~~~~A~~~~~ 77 (115)
T 2kat_A 20 LLRFTLGKTYAEHE-------QFDAALPHLRAALDF---------------DPTYSVAWKWLGKTLQGQGDRAGARQAWE 77 (115)
T ss_dssp HHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcc-------CHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34555555555444 356788888877643 11234778899999999999999999985
No 44
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=49.60 E-value=20 Score=28.53 Aligned_cols=44 Identities=7% Similarity=0.012 Sum_probs=34.7
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...|++.... .....++....|.|..-+|+.++|...+.
T Consensus 42 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 85 (117)
T 3k9i_A 42 EYRKAEAVLANGVKQ---------------FPNHQALRVFYAMVLYNLGRYEQGVELLL 85 (117)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 467888888887653 12235888999999999999999999874
No 45
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=48.38 E-value=22 Score=29.36 Aligned_cols=44 Identities=20% Similarity=0.229 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....+.++..|.|.+.+|+.++|..++.
T Consensus 67 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 110 (142)
T 2xcb_A 67 LYEQALQSYSYGALM---------------DINEPRFPFHAAECHLQLGDLDGAESGFY 110 (142)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHHhc---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 356777777776643 12235778899999999999999998874
No 46
>2bmo_B Oxygenase-beta NBDO; nitrobenzene dioxygenase, nitroarene, rieske non-heme dioxygenase, substrate specificity iron- sulfur, metal-binding, NAD; 1.2A {Comamonas SP} SCOP: d.17.4.4 PDB: 2bmq_B 2bmr_B* 1o7n_B 1ndo_B 1o7g_B* 1o7h_B 1o7m_B 1eg9_B 1o7p_B* 1o7w_B 1uuv_B 1uuw_B 2hmj_B 2hmk_B* 2hml_B* 2hmm_B* 2hmn_B* 2hmo_B*
Probab=47.58 E-value=49 Score=30.60 Aligned_cols=55 Identities=9% Similarity=0.075 Sum_probs=31.2
Q ss_pred EEEEE-EecC-C-CceEEEEEEEEEeeeEecc-CCCccCCCCCcceEEEEEEEEcCCc-eEeeccce
Q 010757 437 TIDSV-TLSQ-E-GRHAWVEATVKESARLTDT-VHPENCDEKISTYTTRYELSSTKSG-WRITDGSK 498 (502)
Q Consensus 437 ~I~sV-~~s~-~-~~rA~VeA~V~E~a~l~~~-~~~~~~~sy~~t~~vrY~L~r~~g~-WkI~~~~V 498 (502)
-|..| .|.. + ++.++|.+.+ .+|.. .+.. +..-.-+.+|.|+|.+|+ |||..=.|
T Consensus 119 ~vsNv~~V~~~~~~d~~~vrs~~----~v~~~r~~~~---~~~~~G~y~D~l~r~~~g~wri~~R~v 178 (194)
T 2bmo_B 119 FVTNVTAAKDKSAPEILHVRSNL----ILHRARRENQ---VDVFYATREDKWKRIEGGGIKLVERFV 178 (194)
T ss_dssp EEEEEEEEECSSCTTEEEEEEEE----EEEEEETTTE---EEEEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred EecCEEEEEEcCCCCEEEEEEEE----EEEEecCCCc---eEEEEEEEEEEEEECCCCCEEEEEEEE
Confidence 45666 6544 3 4677766443 12221 1111 111233688999999998 99997554
No 47
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=47.02 E-value=34 Score=25.95 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=33.1
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 62 (111)
T 2l6j_A 19 LYREAVHCYDQLITA---------------QPQNPVGYSNKAMALIKLGEYTQAIQMCQ 62 (111)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 456777777776643 11235778899999999999999998874
No 48
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=45.09 E-value=93 Score=29.15 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=56.0
Q ss_pred cCCCCCHHHHHHHHHhhccHHHHHHhhhcCCCCCCchhhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCcccc
Q 010757 16 IAGGFTRESFMNEAFLRMTSAEQVKLFSATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLR 95 (502)
Q Consensus 16 ~~~Gl~~edFl~q~~~~LT~~EQv~Lf~~~~~~~~~~~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~ 95 (502)
..|..+.+.+.+.+..++ | .+....+..+.+++..| -..+|..+|+++...
T Consensus 96 ~~g~~~~~~l~~~l~~~l------------p----~~~~~~~~~a~~~~~~g-------~~~~A~~~~~~al~~------ 146 (287)
T 3qou_A 96 FQGPQPEEAIRALLDXVL------------P----REEELXAQQAMQLMQES-------NYTDALPLLXDAWQL------ 146 (287)
T ss_dssp EESCCCHHHHHHHHHHHS------------C----CHHHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH------
T ss_pred eeCCCCHHHHHHHHHHHc------------C----CchhhHHHHHHHHHhCC-------CHHHHHHHHHHHHHh------
Confidence 345567776665555444 2 22345566666666655 356788888877643
Q ss_pred ccCccccccccccchhhHHHHHHHHhcCChHHHHHHhccCC
Q 010757 96 DLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGLDS 136 (502)
Q Consensus 96 ~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~l~~ 136 (502)
.....+.+...|.|++-.|+.++|...+..--
T Consensus 147 ---------~P~~~~a~~~la~~~~~~g~~~~A~~~l~~~~ 178 (287)
T 3qou_A 147 ---------SNQNGEIGLLLAETLIALNRSEDAEAVLXTIP 178 (287)
T ss_dssp ---------TTSCHHHHHHHHHHHHHTTCHHHHHHHHTTSC
T ss_pred ---------CCcchhHHHHHHHHHHHCCCHHHHHHHHHhCc
Confidence 12345888999999999999999999996543
No 49
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=44.95 E-value=48 Score=25.66 Aligned_cols=45 Identities=7% Similarity=-0.223 Sum_probs=34.4
Q ss_pred chHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 74 HLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 74 ~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
.-..+|...|++.... .....++....|.|.+-+|+.++|...+.
T Consensus 64 ~~~~~A~~~~~~a~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 108 (133)
T 2lni_A 64 LEFQLALKDCEECIQL---------------EPTFIKGYTRKAAALEAMKDYTKAMDVYQ 108 (133)
T ss_dssp TCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHh---------------CCCchHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3567888888877653 11235778899999999999999999985
No 50
>3fsd_A NTF2-like protein of unknown function in nutrient; YP_427473.1, NTF2-like protein of unknown function in nutrie uptake; HET: UNL; 1.70A {Rhodospirillum rubrum atcc 11170} SCOP: d.17.4.0
Probab=44.62 E-value=70 Score=26.74 Aligned_cols=22 Identities=18% Similarity=0.306 Sum_probs=15.1
Q ss_pred ceEEEEEEEEcCCc--eEeeccce
Q 010757 477 TYTTRYELSSTKSG--WRITDGSK 498 (502)
Q Consensus 477 t~~vrY~L~r~~g~--WkI~~~~V 498 (502)
..+.+.+..|.+|+ |||...+.
T Consensus 107 ~~~~t~vw~k~~g~~gWriv~~h~ 130 (134)
T 3fsd_A 107 TLRFTRIWRRTQGPAGWKLVAGHC 130 (134)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEE
T ss_pred EEEEEEEEEECCCCccceEeEeEE
Confidence 34455666788888 99976554
No 51
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=42.42 E-value=63 Score=26.46 Aligned_cols=59 Identities=15% Similarity=0.240 Sum_probs=43.0
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|.-+.+++..| -..+|..+|+++... .....++....|.|..-+|+.++|...+
T Consensus 18 ~~~~~~~a~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 75 (142)
T 2xcb_A 18 LEQLYALGFNQYQAG-------KWDDAQKIFQALCML---------------DHYDARYFLGLGACRQSLGLYEQALQSY 75 (142)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-------cHHHHHHHHHHHHHh---------------CCccHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 344565566665544 357888888887753 1224578889999999999999999988
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 76 ~ 76 (142)
T 2xcb_A 76 S 76 (142)
T ss_dssp H
T ss_pred H
Confidence 4
No 52
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=42.30 E-value=28 Score=30.25 Aligned_cols=44 Identities=11% Similarity=0.166 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...|++.... .....+.+...|.|.+-+|+.++|...+.
T Consensus 85 ~~~~Ai~~~~~al~l---------------~P~~~~~~~~lg~~~~~lg~~~eA~~~~~ 128 (151)
T 3gyz_A 85 QFQQAADLYAVAFAL---------------GKNDYTPVFHTGQCQLRLKAPLKAKECFE 128 (151)
T ss_dssp CHHHHHHHHHHHHHH---------------SSSCCHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh---------------CCCCcHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 466787777777643 12245888999999999999999999984
No 53
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=42.17 E-value=30 Score=29.21 Aligned_cols=43 Identities=21% Similarity=0.134 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 76 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 76 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+|...+++.... .....+.++..|.|.+-+|+.++|...+.
T Consensus 71 ~~~A~~~~~~al~l---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 113 (148)
T 2vgx_A 71 YDLAIHSYSYGAVM---------------DIXEPRFPFHAAECLLQXGELAEAESGLF 113 (148)
T ss_dssp HHHHHHHHHHHHHH---------------STTCTHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---------------CCCCchHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46777777776543 12235788899999999999999998874
No 54
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=41.94 E-value=34 Score=25.82 Aligned_cols=43 Identities=14% Similarity=0.027 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhCcCccccccCccccccccccch-hhHHHHHHHHhcCChHHHHHHhc
Q 010757 76 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEME-FALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 76 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~D-v~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+|...|+++... .....+ .+...|.|.+.+|+.++|...+.
T Consensus 16 ~~~A~~~~~~al~~---------------~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 59 (99)
T 2kc7_A 16 IENALQALEEFLQT---------------EPVGKDEAYYLMGNAYRKLGDWQKALNNYQ 59 (99)
T ss_dssp HHHHHHHHHHHHHH---------------CSSTHHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 46788888877643 122346 88899999999999999999885
No 55
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=40.44 E-value=40 Score=24.54 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....+.....|.|...+|+.++|...+.
T Consensus 24 ~~~~A~~~~~~a~~~---------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~~ 67 (91)
T 1na3_A 24 DYDEAIEYYQKALEL---------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (91)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCCCHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 456788888777643 11234778899999999999999999875
No 56
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=39.63 E-value=34 Score=28.70 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...|++.... .....++...+|.|++-+|+.++|...+.
T Consensus 26 ~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~~~A~~~~~ 69 (164)
T 3sz7_A 26 EYSKAIDLYTQALSI---------------APANPIYLSNRAAAYSASGQHEKAAEDAE 69 (164)
T ss_dssp CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCcCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 356788888777643 12235788999999999999999999874
No 57
>3b7c_A Uncharacterized protein; NTF-2 like protein, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.70A {Shewanella oneidensis} SCOP: d.17.4.16
Probab=38.22 E-value=19 Score=29.92 Aligned_cols=18 Identities=17% Similarity=0.226 Sum_probs=15.4
Q ss_pred EEEEEEEEcCCceEeecc
Q 010757 479 TTRYELSSTKSGWRITDG 496 (502)
Q Consensus 479 ~vrY~L~r~~g~WkI~~~ 496 (502)
+.++.+.|.+|+|||...
T Consensus 101 r~T~v~~k~~g~W~Iv~~ 118 (122)
T 3b7c_A 101 VFTLLVEKIDDRWVITMD 118 (122)
T ss_dssp EEEEEEEEETTEEEEEEE
T ss_pred EEEEEEEEeCCCEEEEEE
Confidence 688899999999999753
No 58
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=37.67 E-value=41 Score=26.60 Aligned_cols=57 Identities=11% Similarity=-0.000 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+.-+.++...| -..+|...|++.... .....+....+|.|...+|+.++|...+.
T Consensus 40 ~~~~~a~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~~~~~~A~~~~~ 96 (126)
T 3upv_A 40 GYSNRAAALAKLM-------SFPEAIADCNKAIEK---------------DPNFVRAYIRKATAQIAVKEYASALETLD 96 (126)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-------CHHHHHHHHHHHHHh---------------CCCcHHHHHHHHHHHHHHhCHHHHHHHHH
Confidence 4445555555443 456777777776643 12235788999999999999999999884
No 59
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=36.71 E-value=40 Score=28.22 Aligned_cols=57 Identities=11% Similarity=-0.089 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..|.-+.+++..| -..+|...|++.... .....+.+..+|.|++-+|+.++|...+.
T Consensus 47 ~~~~l~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 103 (164)
T 3sz7_A 47 YLSNRAAAYSASG-------QHEKAAEDAELATVV---------------DPKYSKAWSRLGLARFDMADYKGAKEAYE 103 (164)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHcc-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHccCHHHHHHHHH
Confidence 4445555555544 357788888777643 12235788999999999999999999875
No 60
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=36.41 E-value=35 Score=26.45 Aligned_cols=59 Identities=5% Similarity=-0.024 Sum_probs=40.2
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
..+.|.-+..+...| -..+|...+++.... .....++....|.|.+.+|+.++|...+
T Consensus 16 ~~~~~~~~~~~~~~~-------~~~~A~~~~~~al~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~ 73 (133)
T 2lni_A 16 ALMVKNKGNECFQKG-------DYPQAMKHYTEAIKR---------------NPKDAKLYSNRAACYTKLLEFQLALKDC 73 (133)
T ss_dssp HHHHHHHHHHHHHTT-------CSHHHHHHHHHHHTT---------------CTTCHHHHHHHHHHHTTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHc---------------CCCcHHHHHHHHHHHHHhccHHHHHHHH
Confidence 334444444444333 346788888877643 1223578889999999999999999887
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 74 ~ 74 (133)
T 2lni_A 74 E 74 (133)
T ss_dssp H
T ss_pred H
Confidence 4
No 61
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=36.30 E-value=48 Score=26.28 Aligned_cols=44 Identities=16% Similarity=0.141 Sum_probs=33.5
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...|++.... .....++....|.|...+|+.++|..++.
T Consensus 80 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 123 (148)
T 2dba_A 80 DYDKAETEASKAIEK---------------DGGDVKALYRRSQALEKLGRLDQAVLDLQ 123 (148)
T ss_dssp CHHHHHHHHHHHHHH---------------TSCCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh---------------CccCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 456788887776643 11235788899999999999999999884
No 62
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=35.18 E-value=82 Score=25.41 Aligned_cols=57 Identities=21% Similarity=0.115 Sum_probs=41.9
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..|.-+.+++..| -..+|...|++.... .....+.....|.|..-+|+.++|...+.
T Consensus 19 ~~~~~g~~~~~~g-------~~~~A~~~~~~al~~---------------~P~~~~a~~~lg~~~~~~g~~~~A~~~~~ 75 (121)
T 1hxi_A 19 NPMEEGLSMLKLA-------NLAEAALAFEAVCQK---------------EPEREEAWRSLGLTQAENEKDGLAIIALN 75 (121)
T ss_dssp CHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHcC-------CHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 3566666666655 356788888877653 12245788899999999999999998884
No 63
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=33.79 E-value=59 Score=24.51 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=32.8
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|..++++.... .....+.....|.|..-.|+.++|...+.
T Consensus 24 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 67 (125)
T 1na0_A 24 DYDEAIEYYQKALEL---------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 67 (125)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHH---------------CcCcHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 467788888877643 11234677888999999999999998874
No 64
>2rcd_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.32A {Pectobacterium atrosepticum SCRI1043} SCOP: d.17.4.18
Probab=33.36 E-value=25 Score=29.30 Aligned_cols=19 Identities=21% Similarity=0.408 Sum_probs=15.8
Q ss_pred EEEEEEEEcCCceEeeccc
Q 010757 479 TTRYELSSTKSGWRITDGS 497 (502)
Q Consensus 479 ~vrY~L~r~~g~WkI~~~~ 497 (502)
+.+++++|.+|+|||....
T Consensus 105 ~~t~v~~r~~~gWrIv~~H 123 (129)
T 2rcd_A 105 RQMQTWVKMPEGWRIVAAH 123 (129)
T ss_dssp EEEEEEEEETTEEEEEEEE
T ss_pred eEEEEEEECCCcEEEEEEe
Confidence 5588999999999998653
No 65
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=33.30 E-value=57 Score=24.92 Aligned_cols=44 Identities=11% Similarity=0.213 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|..++++.... .....++....|.|.+.+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~a~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 62 (131)
T 1elr_A 19 DFDTALKHYDKAKEL---------------DPTNMTYITNQAAVYFEKGDYNKCRELCE 62 (131)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhc---------------CCccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 467888888877653 11235778899999999999999999875
No 66
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=33.30 E-value=58 Score=25.42 Aligned_cols=60 Identities=22% Similarity=0.170 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..|..+.++...| -..+|...|+.+.... |....-.+..+..|.|..-+|+.++|...+.
T Consensus 41 ~~~~lg~~~~~~~-------~~~~A~~~~~~~~~~~------------p~~~~~~~~~~~la~~~~~~g~~~~A~~~~~ 100 (129)
T 2xev_A 41 ALYWLGESYYATR-------NFQLAEAQFRDLVSRY------------PTHDKAAGGLLKLGLSQYGEGKNTEAQQTLQ 100 (129)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHHC------------TTSTTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-------cHHHHHHHHHHHHHHC------------CCCcccHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 4555556665543 3567888888776531 0001114678899999999999999999874
No 67
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=33.15 E-value=54 Score=25.88 Aligned_cols=44 Identities=7% Similarity=-0.064 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....++...+|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~al~~---------------~p~~~~~~~~~a~~~~~~~~~~~A~~~~~ 62 (126)
T 3upv_A 19 DWPNAVKAYTEMIKR---------------APEDARGYSNRAAALAKLMSFPEAIADCN 62 (126)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCChHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 356787777776643 12235888999999999999999999874
No 68
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=32.77 E-value=55 Score=24.28 Aligned_cols=47 Identities=9% Similarity=-0.015 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhc-CChHHHHHHhcc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV-GKLDECRLWLGL 134 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLL-G~~~~a~~~l~l 134 (502)
-..+|...+++..+..- . ....++....|.|.+.+ |+.++|...+..
T Consensus 55 ~~~~A~~~~~~a~~~~~-------~------~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~ 102 (112)
T 2kck_A 55 RYEEAVDCYNYVINVIE-------D------EYNKDVWAAKADALRYIEGKEVEAEIAEAR 102 (112)
T ss_dssp CHHHHHHHHHHHHHTSC-------C------TTCHHHHHHHHHHHTTCSSCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCc-------c------cchHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 36788888887775410 0 01357788999999999 999999999843
No 69
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=32.73 E-value=57 Score=24.38 Aligned_cols=44 Identities=14% Similarity=0.003 Sum_probs=30.5
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 19 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 62 (118)
T 1elw_A 19 NIDDALQCYSEAIKL---------------DPHNHVLYSNRSAAYAKKGDYQKAYEDGC 62 (118)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHhhccHHHHHHHHH
Confidence 356677777766543 11235777888889999999999888774
No 70
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=32.09 E-value=92 Score=27.98 Aligned_cols=66 Identities=9% Similarity=0.135 Sum_probs=52.1
Q ss_pred chhhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHH
Q 010757 51 AETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRL 130 (502)
Q Consensus 51 ~~~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~ 130 (502)
.+....|.-+++||= +++|.-|++|-.+|+.+-...- ..+..|-..-.|+.+.-+|+.++|+.
T Consensus 30 ~~~~~~F~ya~~Lv~----S~~~~~~~~gI~lLe~ll~~~~-------------p~~~rd~lY~LAv~~~kl~~Y~~A~~ 92 (152)
T 1pc2_A 30 VSKSTQFEYAWCLVR----SKYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALK 92 (152)
T ss_dssp CCHHHHHHHHHHHHT----CSSHHHHHHHHHHHHHHHHHSC-------------HHHHHHHHHHHHHHHHHTSCHHHHHH
T ss_pred CcHHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------ccchHHHHHHHHHHHHHccCHHHHHH
Confidence 345678888888874 7899999999999999986510 01245778889999999999999999
Q ss_pred Hhc
Q 010757 131 WLG 133 (502)
Q Consensus 131 ~l~ 133 (502)
.+.
T Consensus 93 y~~ 95 (152)
T 1pc2_A 93 YVR 95 (152)
T ss_dssp HHH
T ss_pred HHH
Confidence 874
No 71
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=31.54 E-value=98 Score=27.01 Aligned_cols=63 Identities=8% Similarity=0.134 Sum_probs=51.7
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|.-|++||= ++.|+-|+++-.||+.|-..+- ....-|-..-.|+++.=||+.++|+..+
T Consensus 35 ~~~~F~yAw~Lv~----S~~~~d~~~GI~lLe~l~~~~~-------------p~~~Rd~lY~LAvg~yklg~Y~~A~~~~ 97 (126)
T 1nzn_A 35 KSTQFEYAWCLVR----TRYNDDIRKGIVLLEELLPKGS-------------KEEQRDYVFYLAVGNYRLKEYEKALKYV 97 (126)
T ss_dssp HHHHHHHHHHHTT----SSSHHHHHHHHHHHHHHTTTSC-------------HHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHc----CCCHHHHHHHHHHHHHHHhcCC-------------cchHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 5678888888874 8999999999999999986510 0134577788899999999999999886
No 72
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=31.42 E-value=60 Score=25.63 Aligned_cols=57 Identities=16% Similarity=0.066 Sum_probs=38.3
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..|.-+..+...| -..+|...|++.... .....++....|.|.+-+|+.++|...+.
T Consensus 45 ~~~~l~~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~~ 101 (137)
T 3q49_B 45 YYTNRALCYLKMQ-------QPEQALADCRRALEL---------------DGQSVKAHFFLGQCQLEMESYDEAIANLQ 101 (137)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhc-------CHHHHHHHHHHHHHh---------------CchhHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 3444444454433 345677777766643 11235778899999999999999998874
No 73
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=30.66 E-value=1.1e+02 Score=24.97 Aligned_cols=57 Identities=7% Similarity=-0.035 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..|.-+.++...| -..+|...|++...- .....+.+..+|.|.+-+|+.++|...+.
T Consensus 49 ~~~~~~~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~~~~~~A~~~~~ 105 (126)
T 4gco_A 49 LYSNRAACLTKLM-------EFQRALDDCDTCIRL---------------DSKFIKGYIRKAACLVAMREWSKAQRAYE 105 (126)
T ss_dssp HHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHhhHHHhhc-------cHHHHHHHHHHHHHh---------------hhhhhHHHHHHHHHHHHCCCHHHHHHHHH
Confidence 4445555555544 356677766665532 12235778899999999999999998874
No 74
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=30.64 E-value=94 Score=24.49 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|..++++..... |......++....|.|++-+|+.++|...+.
T Consensus 43 ~~~~A~~~~~~a~~~~------------~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 89 (148)
T 2dba_A 43 DYGGALAAYTQALGLD------------ATPQDQAVLHRNRAACHLKLEDYDKAETEAS 89 (148)
T ss_dssp CHHHHHHHHHHHHTSC------------CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHc------------ccchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 4678888888877540 0001115778889999999999999998874
No 75
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=30.22 E-value=1.1e+02 Score=28.76 Aligned_cols=69 Identities=7% Similarity=-0.103 Sum_probs=50.7
Q ss_pred hcCCCCCCchhhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhc
Q 010757 43 SATPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLV 122 (502)
Q Consensus 43 ~~~~~~~~~~~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLL 122 (502)
...+.++..+....|.-+.++...| -..+|..+|++..+. .....+.....|.|+.-+
T Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~ 112 (365)
T 4eqf_A 55 YFHTENPFKDWPGAFEEGLKRLKEG-------DLPVTILFMEAAILQ---------------DPGDAEAWQFLGITQAEN 112 (365)
T ss_dssp CCCSSCTTTTCTTHHHHHHHHHHHT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHT
T ss_pred hcccCCcccchhHHHHHHHHHHHCC-------CHHHHHHHHHHHHHh---------------CcCCHHHHHHHHHHHHHC
Confidence 3345555444556777788887776 467888888888753 122357888999999999
Q ss_pred CChHHHHHHhc
Q 010757 123 GKLDECRLWLG 133 (502)
Q Consensus 123 G~~~~a~~~l~ 133 (502)
|+.++|...+.
T Consensus 113 g~~~~A~~~~~ 123 (365)
T 4eqf_A 113 ENEQAAIVALQ 123 (365)
T ss_dssp TCHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 99999999884
No 76
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=29.89 E-value=66 Score=25.38 Aligned_cols=59 Identities=12% Similarity=0.054 Sum_probs=40.6
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
+...|.-+..+...| -..+|...+++.... .....++....|.|.+-+|+.++|...+
T Consensus 9 ~~~~~~~g~~~~~~~-------~~~~A~~~~~~al~~---------------~~~~~~~~~~l~~~~~~~~~~~~A~~~~ 66 (137)
T 3q49_B 9 AQELKEQGNRLFVGR-------KYPEAAACYGRAITR---------------NPLVAVYYTNRALCYLKMQQPEQALADC 66 (137)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-------cHHHHHHHHHHHHhh---------------CcCcHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 334455555555443 256788887776643 1223578899999999999999999887
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 67 ~ 67 (137)
T 3q49_B 67 R 67 (137)
T ss_dssp H
T ss_pred H
Confidence 4
No 77
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=29.38 E-value=56 Score=27.51 Aligned_cols=59 Identities=20% Similarity=0.267 Sum_probs=42.2
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|.-+.++...| -..+|...|+++... .....+.....|.|..-+|+.++|...+
T Consensus 21 ~~~~~~~g~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~ 78 (148)
T 2vgx_A 21 LEQLYSLAFNQYQSG-------XYEDAHXVFQALCVL---------------DHYDSRFFLGLGACRQAMGQYDLAIHSY 78 (148)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-------ChHHHHHHHHHHHHc---------------CcccHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 334555555655554 356888888887653 1224578889999999999999999887
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 79 ~ 79 (148)
T 2vgx_A 79 S 79 (148)
T ss_dssp H
T ss_pred H
Confidence 4
No 78
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=29.28 E-value=90 Score=25.17 Aligned_cols=61 Identities=13% Similarity=-0.102 Sum_probs=40.8
Q ss_pred HHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 58 GVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 58 ~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+.++...|..-.+-.-..+|...+++.... .....++....|.|.+-+|+.++|...+.
T Consensus 11 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 71 (166)
T 1a17_A 11 KRAEELKTQANDYFKAKDYENAIKFYSQAIEL---------------NPSNAIYYGNRSLAYLRTECYGYALGDAT 71 (166)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh---------------CCCChHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34444444444433344567888888877643 11235778888999999999999998874
No 79
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=29.28 E-value=72 Score=24.23 Aligned_cols=44 Identities=7% Similarity=-0.027 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....++....|.|...+|+.++|...+.
T Consensus 27 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 70 (131)
T 2vyi_A 27 NFEAAVHFYGKAIEL---------------NPANAVYFCNRAAAYSKLGNYAGAVQDCE 70 (131)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHc---------------CCCCHHHHHHHHHHHHHhhchHHHHHHHH
Confidence 356777777776643 11234677888999999999999988874
No 80
>3ke7_A Putative ketosteroid isomerase; structural genomics, joint C structural genomics, JCSG, protein structure initiative; HET: MSE BCN; 1.45A {Parabacteroides distasonis atcc 8503}
Probab=28.49 E-value=1.4e+02 Score=25.93 Aligned_cols=20 Identities=10% Similarity=0.323 Sum_probs=16.7
Q ss_pred cceEEEEEEEEc-CCceEeec
Q 010757 476 STYTTRYELSST-KSGWRITD 495 (502)
Q Consensus 476 ~t~~vrY~L~r~-~g~WkI~~ 495 (502)
...++++.+.|. +|.|||..
T Consensus 104 ~~~r~T~V~~r~~dG~W~ivH 124 (134)
T 3ke7_A 104 IKWNCTEVYRRNPDNQWKIIQ 124 (134)
T ss_dssp EEEEEEEEEEECTTSBEEEEE
T ss_pred EEEEEEEEEEEcCCCcEEEEE
Confidence 466888899999 99999864
No 81
>1idp_A Scytalone dehydratase; lyase, melanine biosynthesis; 1.45A {Magnaporthe grisea} SCOP: d.17.4.1 PDB: 2std_A* 1std_A* 3std_A* 6std_A* 4std_A* 5std_A* 7std_A*
Probab=28.33 E-value=1.8e+02 Score=26.34 Aligned_cols=52 Identities=2% Similarity=-0.059 Sum_probs=26.9
Q ss_pred CceEEEEEEEEEeeeEeccCCCccCC-CCCcceEEEEEEEEcCCceEeeccce
Q 010757 447 GRHAWVEATVKESARLTDTVHPENCD-EKISTYTTRYELSSTKSGWRITDGSK 498 (502)
Q Consensus 447 ~~rA~VeA~V~E~a~l~~~~~~~~~~-sy~~t~~vrY~L~r~~g~WkI~~~~V 498 (502)
.+.|+..-++.-....|.++...... .-...-..++.++|.+|+|||+.-..
T Consensus 97 dt~a~g~~~~~~~~~~y~d~~~~~~~~~ghg~G~Y~~~Y~r~dG~WkIa~~~~ 149 (172)
T 1idp_A 97 EDEVIGYHQLRVPHQRYKDTTMKEVTMKGHAHSANLHWYKKIDGVWKFAGLKP 149 (172)
T ss_dssp TTEEEEEEEEEEEEEEESSTTCCCEEEEEEEEEEEEEEEEEETTEEEEEEEEE
T ss_pred CCeEEEEEEEEEcccccccccccceeecccccccceEEEEEECCEEEEEEEEE
Confidence 44455455555555666443222100 00001135556678899999997654
No 82
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=28.15 E-value=43 Score=27.19 Aligned_cols=59 Identities=7% Similarity=-0.082 Sum_probs=42.4
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|.-+.++...| -..+|...|++.... .....+.+...|.|..-+|+.++|...+
T Consensus 51 ~~a~~~lg~~~~~~g-------~~~~A~~~~~~al~l---------------~P~~~~~~~~la~~~~~~g~~~~A~~~~ 108 (121)
T 1hxi_A 51 EEAWRSLGLTQAENE-------KDGLAIIALNHARML---------------DPKDIAVHAALAVSHTNEHNANAALASL 108 (121)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 345666666666554 356788888776643 1223578889999999999999999988
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 109 ~ 109 (121)
T 1hxi_A 109 R 109 (121)
T ss_dssp H
T ss_pred H
Confidence 4
No 83
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=27.75 E-value=87 Score=25.42 Aligned_cols=63 Identities=11% Similarity=0.093 Sum_probs=43.9
Q ss_pred HHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 56 AYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 56 ~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
.-..|.|+--.|-.--+=.-..+|...+++...- .....+.+.-+|.|.+-+|+.++|...+.
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~---------------~p~~~~~~~nlg~~~~~~~~~~~A~~~~~ 66 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL---------------DPSNITFYNNKAAVYFEEKKFAECVQFCE 66 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh---------------CCCCHHHHHhHHHHHHHhhhHHHHHHHHH
Confidence 3355666665565444444577888888776532 12235778889999999999999998874
No 84
>3ub1_A ORF13-like protein; NTF2-like, transport protein; HET: MSE; 1.80A {Clostridium perfringens}
Probab=26.79 E-value=82 Score=30.83 Aligned_cols=52 Identities=4% Similarity=-0.020 Sum_probs=32.5
Q ss_pred EEEEEEecC-CCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeecccee
Q 010757 437 TIDSVTLSQ-EGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKI 499 (502)
Q Consensus 437 ~I~sV~~s~-~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi 499 (502)
+|+++.+.. +++.+.+.++|+.... + .+. +-..+-+|.++++.|.|.++.+-
T Consensus 197 ~l~~~~vy~~~~~~v~a~V~v~~~d~----~-t~~------~e~y~L~L~k~~~~w~V~~m~~~ 249 (261)
T 3ub1_A 197 KIDRINIYKLSDKEFLAIVDLNVDSF----G-NAI------KQGFNLTVVQEGDKFLVKTLEPR 249 (261)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEET----T-EEE------EEEEEEEEEEETTEEEECCCEEC
T ss_pred EeccEEEecCCCcEEEEEEEEEEcCC----C-ceE------EEEEEEEEEECCCeEEEEeeecc
Confidence 777877643 5666666666644422 1 111 23456667788899999998763
No 85
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=26.65 E-value=1.5e+02 Score=26.25 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=43.4
Q ss_pred hHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 54 FEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 54 ~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
...|.-+.+++..| -..+|...|++..+. .....+.....|.|.+-+|+.++|...+.
T Consensus 6 ~~~~~lg~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~a~~~lg~~~~~~g~~~~A~~~~~ 63 (217)
T 2pl2_A 6 QNPLRLGVQLYALG-------RYDAALTLFERALKE---------------NPQDPEALYWLARTQLKLGLVNPALENGK 63 (217)
T ss_dssp HHHHHHHHHHHHTT-------CHHHHHHHHHHHHTT---------------SSSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHcC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCCHHHHHHHHH
Confidence 34556666666655 367888888887754 12345888999999999999999999874
No 86
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=26.07 E-value=89 Score=23.68 Aligned_cols=43 Identities=14% Similarity=-0.081 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 76 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 76 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+|...+++.... .....+.....|.|..-+|+.++|...+.
T Consensus 62 ~~~A~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~A~~~~~ 104 (131)
T 2vyi_A 62 YAGAVQDCERAICI---------------DPAYSKAYGRMGLALSSLNKHVEAVAYYK 104 (131)
T ss_dssp HHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hHHHHHHHHHHHhc---------------CccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 56777777776643 11235778899999999999999999885
No 87
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.88 E-value=1.9e+02 Score=25.90 Aligned_cols=62 Identities=11% Similarity=-0.045 Sum_probs=46.5
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|.-+.+++..| -..+|...|+++.... |......+..+..|.|++-+|+.++|...+
T Consensus 15 ~~~~~~~a~~~~~~g-------~~~~A~~~~~~~l~~~------------p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~ 75 (261)
T 3qky_A 15 PQEAFERAMEFYNQG-------KYDRAIEYFKAVFTYG------------RTHEWAADAQFYLARAYYQNKEYLLAASEY 75 (261)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHGGGC------------SCSTTHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-------CHHHHHHHHHHHHHhC------------CCCcchHHHHHHHHHHHHHhCcHHHHHHHH
Confidence 456777777777665 4678999999988641 111112578899999999999999999987
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 76 ~ 76 (261)
T 3qky_A 76 E 76 (261)
T ss_dssp H
T ss_pred H
Confidence 4
No 88
>1y12_A Hypothetical protein PA0085; hemolysin-corregulation, structural PSI, protein structure initiative, midwest center for struc genomics; 1.95A {Pseudomonas aeruginosa PAO1} SCOP: b.157.1.1
Probab=25.62 E-value=2.1e+02 Score=25.64 Aligned_cols=58 Identities=9% Similarity=-0.057 Sum_probs=35.3
Q ss_pred CcEEEeeeeeeEEEEEEecC--CCceEEEEEEEEEeeeE--eccCCCccCCCC-CcceEEEEEEE
Q 010757 426 GWTYDYSLLNLTIDSVTLSQ--EGRHAWVEATVKESARL--TDTVHPENCDEK-ISTYTTRYELS 485 (502)
Q Consensus 426 g~y~~Y~l~~l~I~sV~~s~--~~~rA~VeA~V~E~a~l--~~~~~~~~~~sy-~~t~~vrY~L~ 485 (502)
-.|++++|.++.|.+|..+- ++.+.+-..++.+..-- |... +.+.+. .....+-|++.
T Consensus 98 ~~y~~i~L~~a~Is~i~~~~~~~~~~~~E~vsl~y~~I~~~y~~~--~~~G~~~~~~~~~~wd~~ 160 (165)
T 1y12_A 98 VEYLIITLKEVLVSSVSTGGSGGEDRLTENVTLNFAQVQVDYQPQ--KADGAKDGGPVKYGWNIR 160 (165)
T ss_dssp CCCEEEEEEEEEEEEEECCCCSSCSSCEEEEEEEEEEEEEEECCB--CTTSCBCSSCEEEEEETT
T ss_pred eEEEEEEEEeEEEEEEEecccCCCCCcEEEEEEEeeEEEEEEEee--CCCCCccCCcEEEEEEee
Confidence 47999999999999999754 44555555666665433 3222 222233 34445666553
No 89
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=25.32 E-value=1.2e+02 Score=22.86 Aligned_cols=22 Identities=18% Similarity=0.096 Sum_probs=10.3
Q ss_pred hhHHHHHHHHhcCChHHHHHHh
Q 010757 111 FALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 111 v~~e~a~c~LLLG~~~~a~~~l 132 (502)
+....|.|....|+.++|...+
T Consensus 71 ~~~~l~~~~~~~~~~~~A~~~~ 92 (136)
T 2fo7_A 71 AWYNLGNAYYKQGDYDEAIEYY 92 (136)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHH
Confidence 3344445555555555544333
No 90
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=25.27 E-value=99 Score=22.78 Aligned_cols=45 Identities=13% Similarity=0.174 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhcc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGL 134 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~l 134 (502)
-..+|...+++.... .....+.....|.|.+-+|+.++|...+..
T Consensus 21 ~~~~A~~~~~~a~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 65 (112)
T 2kck_A 21 NYTESIDLFEKAIQL---------------DPEESKYWLMKGKALYNLERYEEAVDCYNY 65 (112)
T ss_dssp CHHHHHHHHHHHHHH---------------CCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHh---------------CcCCHHHHHHHHHHHHHccCHHHHHHHHHH
Confidence 356788888776643 112346778999999999999999998753
No 91
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=25.01 E-value=59 Score=25.35 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=40.6
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
+.|..+..++..| -..+|...|+++... . |......+..+..|.|.+-+|+.++|...+.
T Consensus 4 ~~~~~a~~~~~~~-------~~~~A~~~~~~~~~~----~--------p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~ 63 (129)
T 2xev_A 4 TAYNVAFDALKNG-------KYDDASQLFLSFLEL----Y--------PNGVYTPNALYWLGESYYATRNFQLAEAQFR 63 (129)
T ss_dssp CHHHHHHHHHHTT-------CHHHHHHHHHHHHHH----C--------SSSTTHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-------CHHHHHHHHHHHHHH----C--------CCCcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 3455566665544 357788888887753 0 0011112678899999999999999999874
No 92
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=25.01 E-value=82 Score=23.44 Aligned_cols=59 Identities=5% Similarity=-0.175 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhcc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGL 134 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~l 134 (502)
..+.-+..+...| -..+|...+++.... .....++....|.|..-+|+.++|...+..
T Consensus 40 ~~~~~a~~~~~~~-------~~~~A~~~~~~~~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~ 97 (118)
T 1elw_A 40 LYSNRSAAYAKKG-------DYQKAYEDGCKTVDL---------------KPDWGKGYSRKAAALEFLNRFEEAKRTYEE 97 (118)
T ss_dssp HHHHHHHHHHHHT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhhc-------cHHHHHHHHHHHHHh---------------CcccHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 3444444454443 356777777776643 112347788999999999999999998853
Q ss_pred C
Q 010757 135 D 135 (502)
Q Consensus 135 ~ 135 (502)
.
T Consensus 98 ~ 98 (118)
T 1elw_A 98 G 98 (118)
T ss_dssp H
T ss_pred H
Confidence 3
No 93
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=25.00 E-value=74 Score=26.72 Aligned_cols=43 Identities=14% Similarity=0.003 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 76 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 76 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+|...|++..+. .....+.+...|.|..-+|+.++|...+.
T Consensus 123 ~~~A~~~~~~~l~~---------------~p~~~~~~~~lg~~~~~~g~~~~A~~~~~ 165 (184)
T 3vtx_A 123 HDKAIEAYEKTISI---------------KPGFIRAYQSIGLAYEGKGLRDEAVKYFK 165 (184)
T ss_dssp HHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred chhHHHHHHHHHHh---------------cchhhhHHHHHHHHHHHCCCHHHHHHHHH
Confidence 56677777665543 12235777888999999999999988874
No 94
>3jum_A Phenazine biosynthesis protein A/B; chirality, drug design, medicinal CH inhibitor, biosynthetic protein; HET: AOD; 1.45A {Burkholderia SP} PDB: 3b4o_A* 3b4p_A* 3dzl_A* 3ex9_A 3cnm_A* 3jun_A* 3juo_A* 3jup_A* 3juq_A*
Probab=24.81 E-value=1.9e+02 Score=26.64 Aligned_cols=45 Identities=20% Similarity=0.309 Sum_probs=28.7
Q ss_pred cCCCceEEEEEEEEEeeeEeccCCCccCCCCCcceEEEEEEEEcCCceEeeccceeec
Q 010757 444 SQEGRHAWVEATVKESARLTDTVHPENCDEKISTYTTRYELSSTKSGWRITDGSKIVY 501 (502)
Q Consensus 444 s~~~~rA~VeA~V~E~a~l~~~~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi~~ 501 (502)
..||+.+.||.+. ..+....|.+. ..|+++|..+ +++.||+|++|
T Consensus 114 taDpd~VvvE~~~--~Gtv~~TGkp~------~~Y~~~yi~V-----~rVrDGKIv~~ 158 (185)
T 3jum_A 114 TQDPNWFWVECRG--EGAIVFPGYPR------GQYRNHFLHS-----FRFENGLIKEQ 158 (185)
T ss_dssp CSSTTEEEEEEEE--EEEECCTTSCC------EEEEEEEEEE-----EEEETTEEEEE
T ss_pred ecCCCEEEEEEEE--EEEEcCCCCcc------ceEEEeEEEE-----EEEECCEEEEE
Confidence 4589989887765 22222222221 3478888777 67888888876
No 95
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=24.73 E-value=1e+02 Score=32.68 Aligned_cols=50 Identities=10% Similarity=-0.006 Sum_probs=39.7
Q ss_pred HHHHhcCChHHHHHHhccCCCCCCCCChhHHHHHHhcCCCCCCCC--hhhHHHHHHHHhhh
Q 010757 117 LCSLLVGKLDECRLWLGLDSDKSPYRNPAIVDFVLENSKEADDND--LPGLCKLLETWLAE 175 (502)
Q Consensus 117 ~c~LLLG~~~~a~~~l~l~~~~sp~~d~~~~~fi~~~s~~~~~~d--LpgLc~~~e~WL~~ 175 (502)
.|++.+|++++|...+.... +-++++.+-+.|.. .+ ++.++..-..||.+
T Consensus 744 ~~~~~~g~~~~a~~~~~~~~-----~~~~A~~lA~~~~~----~~~~i~~~~~~~~~~L~~ 795 (814)
T 3mkq_A 744 NAYWIAGDIQGAKDLLIKSQ-----RFSEAAFLGSTYGL----GDNEVNDIVTKWKENLIL 795 (814)
T ss_dssp HHHHHHTCHHHHHHHHHHTT-----CHHHHHHHHHHTTC----CHHHHHHHHHHHHHHHHT
T ss_pred HHHHHcCCHHHHHHHHHHcC-----ChHHHHHHHHHhCC----ChHHHHHHHHHHHHHHHh
Confidence 48888999999999996554 45788888888854 45 68888888888864
No 96
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=23.30 E-value=1.5e+02 Score=22.01 Aligned_cols=44 Identities=14% Similarity=0.096 Sum_probs=33.0
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...|++.... .....+.....|.|..-+|+.++|...+.
T Consensus 58 ~~~~A~~~~~~~~~~---------------~~~~~~~~~~la~~~~~~~~~~~A~~~~~ 101 (125)
T 1na0_A 58 DYDEAIEYYQKALEL---------------DPNNAEAWYNLGNAYYKQGDYDEAIEYYQ 101 (125)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCccHHHHHHHHHHHHHhcCHHHHHHHHH
Confidence 467788888777643 11124677888999999999999999875
No 97
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=22.65 E-value=2.1e+02 Score=23.86 Aligned_cols=23 Identities=13% Similarity=-0.213 Sum_probs=19.7
Q ss_pred hhHHHHHHHHhcCChHHHHHHhc
Q 010757 111 FALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 111 v~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
.....|.|++.+|+.++|...+.
T Consensus 149 ~~~~la~~~~~~g~~~~A~~~~~ 171 (203)
T 3gw4_A 149 AFRGLGDLAQQEKNLLEAQQHWL 171 (203)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCHHHHHHHHH
Confidence 34678999999999999999875
No 98
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=22.30 E-value=1.5e+02 Score=26.76 Aligned_cols=67 Identities=18% Similarity=0.033 Sum_probs=45.7
Q ss_pred CCCCCCchhhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCC
Q 010757 45 TPNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGK 124 (502)
Q Consensus 45 ~~~~~~~~~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~ 124 (502)
.+.++..+....|.-+..++..| -..+|..+|+++... .....+.....|.|..-+|+
T Consensus 13 ~~~~~~~~~~~~~~~a~~~~~~~-------~~~~A~~~~~~~~~~---------------~~~~~~~~~~l~~~~~~~~~ 70 (327)
T 3cv0_A 13 EANNPYMYHENPMEEGLSMLKLA-------NLAEAALAFEAVCQA---------------APEREEAWRSLGLTQAENEK 70 (327)
T ss_dssp CSSCGGGGSSCHHHHHHHHHHTT-------CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTC
T ss_pred hhccchhhhHHHHHHHHHHHHhc-------cHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHcCC
Confidence 34444333445666666666665 367888888887653 11234677788999999999
Q ss_pred hHHHHHHhc
Q 010757 125 LDECRLWLG 133 (502)
Q Consensus 125 ~~~a~~~l~ 133 (502)
.++|...+.
T Consensus 71 ~~~A~~~~~ 79 (327)
T 3cv0_A 71 DGLAIIALN 79 (327)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998874
No 99
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=22.26 E-value=2.3e+02 Score=24.56 Aligned_cols=59 Identities=10% Similarity=0.023 Sum_probs=42.8
Q ss_pred hhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHh
Q 010757 53 TFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWL 132 (502)
Q Consensus 53 ~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l 132 (502)
....|..+.++...| -..+|...|++.... .....++....|.|..-+|+.++|...+
T Consensus 42 ~~~~~~~~~~~~~~~-------~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~~~~~~A~~~~ 99 (228)
T 4i17_A 42 SVTAYNCGVCADNIK-------KYKEAADYFDIAIKK---------------NYNLANAYIGKSAAYRDMKNNQEYIATL 99 (228)
T ss_dssp HHHHHHHHHHHHHTT-------CHHHHHHHHHHHHHT---------------TCSHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHhh-------cHHHHHHHHHHHHHh---------------CcchHHHHHHHHHHHHHcccHHHHHHHH
Confidence 345555566665554 457788888877754 1224578899999999999999999988
Q ss_pred c
Q 010757 133 G 133 (502)
Q Consensus 133 ~ 133 (502)
.
T Consensus 100 ~ 100 (228)
T 4i17_A 100 T 100 (228)
T ss_dssp H
T ss_pred H
Confidence 4
No 100
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=22.00 E-value=1.1e+02 Score=24.64 Aligned_cols=44 Identities=11% Similarity=-0.029 Sum_probs=32.9
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++.... .....+.....|.|..-+|+.++|...+.
T Consensus 62 ~~~~A~~~~~~a~~~---------------~~~~~~~~~~~a~~~~~~~~~~~A~~~~~ 105 (166)
T 1a17_A 62 CYGYALGDATRAIEL---------------DKKYIKGYYRRAASNMALGKFRAALRDYE 105 (166)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CcccHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 346777777776643 11235788899999999999999999885
No 101
>3kuv_A Fluoroacetyl coenzyme A thioesterase; fluoroacetyl-COA thioesterase FLK, hot DOG folding, thioeste hydrolase; 1.50A {Streptomyces cattleya} PDB: 3kuw_A 3kvu_A* 3p2q_A 3p2r_A 3p2s_A 3kv7_A 3kv8_A 3kvz_A* 3kw1_A* 3kx7_A 3kx8_A 3kvi_A 3p3i_A 3p3f_A
Probab=21.86 E-value=4e+02 Score=23.22 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=53.4
Q ss_pred HhcCCCC-CCCChhhhhchhHHHHHHHHHHHHHHc-----CcEEEeeeeeeEEEEEEecCCCceEEEEEEEEEeeeEecc
Q 010757 392 QAFGPDH-SLGKLPEVLDGQMLKVWTDRASEIAQL-----GWTYDYSLLNLTIDSVTLSQEGRHAWVEATVKESARLTDT 465 (502)
Q Consensus 392 ~AlGp~h-~~~~L~~IL~g~~L~~w~~~a~~l~~~-----g~y~~Y~l~~l~I~sV~~s~~~~rA~VeA~V~E~a~l~~~ 465 (502)
..+|+.. .-+.+.+||..+++--+...+....-+ |..=-+ .+++|+-+.-..-|..+++.|+|.|..
T Consensus 24 ~~~~~~~~~~~~~~~VlaTpamvalmE~aa~~~~~~~L~~g~~tVG--~~v~v~Hlapt~~G~~V~~~a~l~~v~----- 96 (139)
T 3kuv_A 24 RHLYPESPEFAEFPEVFASGFMVGLMEWACVRAMAPYLEPGEGSLG--TAICVTHTAATPPGLTVTVTAELRSVE----- 96 (139)
T ss_dssp HHHCTTCGGGTTCCSCBCHHHHHHHHHHHHHHHTGGGCCTTEEEEE--EEEEEECCSCCCTTSEEEEEEEEEEEE-----
T ss_pred HHhcCCcccccccCcEEeHHHHHHHHHHHHHHHHHhhCCCCCeEEE--EEEEEEEccCCCCCCEEEEEEEEEEEC-----
Confidence 3455431 224567788888888777765443322 322222 244555554444677899999997761
Q ss_pred CCCccCCCCCcceEEEEEEEEcCCceEeeccceeec
Q 010757 466 VHPENCDEKISTYTTRYELSSTKSGWRITDGSKIVY 501 (502)
Q Consensus 466 ~~~~~~~sy~~t~~vrY~L~r~~g~WkI~~~~Vi~~ 501 (502)
+ + ++.+...-.++.=+|.+|...||
T Consensus 97 -g--------r--~~~f~v~a~d~~~~I~~G~h~r~ 121 (139)
T 3kuv_A 97 -G--------R--RLSWRVSAHDGVDEIGSGTHERA 121 (139)
T ss_dssp -T--------T--EEEEEEEEECSSSEEEEEEEEEE
T ss_pred -C--------C--EEEEEEEEEECCEEEEEEEEEEE
Confidence 1 1 24455544343348999988876
No 102
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=21.53 E-value=1.1e+02 Score=24.81 Aligned_cols=44 Identities=7% Similarity=-0.009 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 75 LIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 75 lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
-..+|...+++..+. .....+++..+|.|.+-+|+.++|...+.
T Consensus 28 ~~~~A~~~~~~al~~---------------~p~~~~~~~~~~~~~~~~~~~~~A~~~~~ 71 (126)
T 4gco_A 28 DYPTAMRHYNEAVKR---------------DPENAILYSNRAACLTKLMEFQRALDDCD 71 (126)
T ss_dssp CHHHHHHHHHHHHHH---------------CTTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh---------------CCCCHHHHHHHhhHHHhhccHHHHHHHHH
Confidence 467788888776543 12245888999999999999999998874
No 103
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=21.39 E-value=2.1e+02 Score=26.44 Aligned_cols=66 Identities=12% Similarity=-0.013 Sum_probs=46.7
Q ss_pred CCCCCchhhHHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCCh
Q 010757 46 PNSIPAETFEAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKL 125 (502)
Q Consensus 46 ~~~~~~~~~~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~ 125 (502)
+.++..+....|.-+..++..| -..+|...|++..+. .....+.....|.|.+-+|+.
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~g-------~~~~A~~~~~~al~~---------------~p~~~~~~~~l~~~~~~~g~~ 114 (368)
T 1fch_A 57 EENPLRDHPQPFEEGLRRLQEG-------DLPNAVLLFEAAVQQ---------------DPKHMEAWQYLGTTQAENEQE 114 (368)
T ss_dssp SSCTTTTCSSHHHHHHHHHHTT-------CHHHHHHHHHHHHHS---------------CTTCHHHHHHHHHHHHHTTCH
T ss_pred CCCcccchHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHh---------------CCCCHHHHHHHHHHHHHCcCH
Confidence 3343323345666677776665 367888888888754 122357888999999999999
Q ss_pred HHHHHHhc
Q 010757 126 DECRLWLG 133 (502)
Q Consensus 126 ~~a~~~l~ 133 (502)
++|...+.
T Consensus 115 ~~A~~~~~ 122 (368)
T 1fch_A 115 LLAISALR 122 (368)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 99999884
No 104
>3eaa_A EVPC; T6SS, unknown function; 2.79A {Edwardsiella tarda} SCOP: b.157.1.0
Probab=21.12 E-value=1.7e+02 Score=26.12 Aligned_cols=38 Identities=8% Similarity=-0.105 Sum_probs=27.9
Q ss_pred cCcEEEeeeeeeEEEEEEecC---CCceEEEEEEEEEeeeE
Q 010757 425 LGWTYDYSLLNLTIDSVTLSQ---EGRHAWVEATVKESARL 462 (502)
Q Consensus 425 ~g~y~~Y~l~~l~I~sV~~s~---~~~rA~VeA~V~E~a~l 462 (502)
.-.|++|+|.++.|.+|.++- ++.+..-...+.+..--
T Consensus 94 ~~~y~~i~L~~v~Is~i~~~~~~~~~~~p~E~vsl~y~kI~ 134 (163)
T 3eaa_A 94 KFAFCIYKFTHVAVSSYQCSGATGGSDRPQETIDFAYKEVT 134 (163)
T ss_dssp CCEEEEEEEEEEEEEEEEEECCCSSSSSCEEEEEEECSEEE
T ss_pred eeEEEEEEEEeEEEEEEEeccccCCCCceEEEEEEEeeEeE
Confidence 468999999999999999752 44556555677665443
No 105
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=20.81 E-value=98 Score=25.67 Aligned_cols=43 Identities=19% Similarity=0.201 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhc
Q 010757 76 IADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLG 133 (502)
Q Consensus 76 I~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~ 133 (502)
..+|...|++.... .....+.++.+|.|++-+|+.++|...+.
T Consensus 79 ~~~A~~~~~~al~~---------------~p~~~~a~~~~g~~~~~~g~~~~A~~~~~ 121 (162)
T 3rkv_A 79 LHEAEETSSEVLKR---------------EETNEKALFRRAKARIAAWKLDEAEEDLK 121 (162)
T ss_dssp HHHHHHHHHHHHHH---------------STTCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc---------------CCcchHHHHHHHHHHHHHhcHHHHHHHHH
Confidence 45666666665532 12235778999999999999999999874
No 106
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=20.03 E-value=1.1e+02 Score=25.88 Aligned_cols=64 Identities=16% Similarity=0.118 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhhhccCCCchHHHHHHHHHHHhhCcCccccccCccccccccccchhhHHHHHHHHhcCChHHHHHHhcc
Q 010757 55 EAYGVALALVAQAFVGKQPHLIADADNMFKHLQQNKVPTLRDLGSIYIPLEKHEMEFALERGLCSLLVGKLDECRLWLGL 134 (502)
Q Consensus 55 ~~Y~~alA~iA~GF~~rkP~lI~~A~~~l~~L~~~~~~~~~~~~~~~~~~~~~~~Dv~~e~a~c~LLLG~~~~a~~~l~l 134 (502)
..+.-+..++..| -..+|...|++..+. .....+.+...|.|.+-.|+.++|...+..
T Consensus 8 ~~~~~a~~~~~~g-------~~~~A~~~~~~al~~---------------~P~~~~a~~~la~~~~~~g~~~~A~~~~~~ 65 (176)
T 2r5s_A 8 QLLKQVSELLQQG-------EHAQALNVIQTLSDE---------------LQSRGDVKLAKADCLLETKQFELAQELLAT 65 (176)
T ss_dssp THHHHHHHHHHTT-------CHHHHHHHHHTSCHH---------------HHTSHHHHHHHHHHHHHTTCHHHHHHHHTT
T ss_pred HHHHHHHHHHHcC-------CHHHHHHHHHHHHHH---------------CCCcHHHHHHHHHHHHHCCCHHHHHHHHHH
Confidence 3455555565554 356788888776643 123457889999999999999999999975
Q ss_pred CCCCCC
Q 010757 135 DSDKSP 140 (502)
Q Consensus 135 ~~~~sp 140 (502)
--...|
T Consensus 66 a~~~~p 71 (176)
T 2r5s_A 66 IPLEYQ 71 (176)
T ss_dssp CCGGGC
T ss_pred hhhccC
Confidence 543333
Done!