Query 010759
Match_columns 502
No_of_seqs 486 out of 3547
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 04:14:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010759.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010759hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0273 Beta-transducin family 100.0 9.2E-67 2E-71 476.6 38.8 356 140-502 165-524 (524)
2 KOG0271 Notchless-like WD40 re 100.0 2.6E-58 5.6E-63 410.8 29.9 327 147-499 108-479 (480)
3 KOG0271 Notchless-like WD40 re 100.0 1.2E-50 2.6E-55 361.8 27.1 288 145-458 148-479 (480)
4 KOG0272 U4/U6 small nuclear ri 100.0 1.2E-49 2.6E-54 360.0 23.8 282 151-499 172-458 (459)
5 KOG0286 G-protein beta subunit 100.0 8.9E-45 1.9E-49 313.8 32.8 285 147-458 48-343 (343)
6 KOG0279 G protein beta subunit 100.0 6.4E-44 1.4E-48 306.8 31.6 291 148-501 9-313 (315)
7 KOG0272 U4/U6 small nuclear ri 100.0 4.2E-44 9E-49 324.1 20.0 248 145-458 208-458 (459)
8 KOG0286 G-protein beta subunit 100.0 1.2E-41 2.6E-46 294.5 33.5 280 211-499 53-343 (343)
9 KOG0318 WD40 repeat stress pro 100.0 5E-41 1.1E-45 311.7 39.9 353 147-501 52-560 (603)
10 KOG0282 mRNA splicing factor [ 100.0 2.2E-43 4.8E-48 324.6 22.5 297 137-458 197-503 (503)
11 KOG0295 WD40 repeat-containing 100.0 1.2E-41 2.6E-46 302.7 27.0 299 145-501 99-406 (406)
12 KOG0296 Angio-associated migra 100.0 3.9E-40 8.5E-45 293.3 35.3 333 144-501 54-398 (399)
13 KOG0263 Transcription initiati 100.0 1.4E-41 3E-46 330.6 26.3 311 142-489 366-703 (707)
14 KOG0319 WD40-repeat-containing 100.0 1.7E-40 3.6E-45 319.8 31.1 329 147-501 97-577 (775)
15 KOG0285 Pleiotropic regulator 100.0 5.6E-41 1.2E-45 297.6 25.6 290 141-499 138-437 (460)
16 KOG0291 WD40-repeat-containing 100.0 6.3E-39 1.4E-43 309.3 39.2 331 147-501 138-550 (893)
17 KOG0284 Polyadenylation factor 100.0 3.4E-41 7.5E-46 303.8 19.0 278 213-499 96-378 (464)
18 KOG0645 WD40 repeat protein [G 100.0 9.9E-39 2.1E-43 273.7 33.1 289 147-501 7-311 (312)
19 KOG0315 G-protein beta subunit 100.0 5.7E-39 1.2E-43 271.8 30.1 285 167-479 11-308 (311)
20 KOG0279 G protein beta subunit 100.0 6.9E-39 1.5E-43 275.8 27.0 246 146-460 55-313 (315)
21 KOG0284 Polyadenylation factor 100.0 4.6E-40 1E-44 296.5 19.5 282 154-460 96-380 (464)
22 KOG0318 WD40 repeat stress pro 100.0 5.7E-37 1.2E-41 284.8 38.2 330 148-501 184-602 (603)
23 KOG0319 WD40-repeat-containing 100.0 2.4E-38 5.1E-43 305.0 29.7 344 146-498 184-616 (775)
24 KOG0263 Transcription initiati 100.0 8.3E-39 1.8E-43 311.3 24.1 270 213-501 378-649 (707)
25 KOG0291 WD40-repeat-containing 100.0 1.3E-36 2.9E-41 293.3 37.5 325 150-501 261-612 (893)
26 KOG0265 U5 snRNP-specific prot 100.0 3.3E-37 7.3E-42 268.0 29.5 279 210-498 44-335 (338)
27 KOG0265 U5 snRNP-specific prot 100.0 1.9E-37 4.1E-42 269.5 27.8 285 147-457 40-335 (338)
28 PLN00181 protein SPA1-RELATED; 100.0 3.1E-36 6.7E-41 323.0 42.6 289 150-500 479-792 (793)
29 cd00200 WD40 WD40 domain, foun 100.0 3.1E-36 6.7E-41 284.4 37.2 285 148-458 3-289 (289)
30 KOG0266 WD40 repeat-containing 100.0 6.6E-37 1.4E-41 305.9 34.1 289 147-500 151-453 (456)
31 KOG0273 Beta-transducin family 100.0 2E-36 4.4E-41 277.7 31.9 277 155-460 236-523 (524)
32 KOG0299 U3 snoRNP-associated p 100.0 7.4E-37 1.6E-41 280.1 25.4 295 147-454 135-450 (479)
33 KOG0296 Angio-associated migra 100.0 5.4E-36 1.2E-40 266.9 29.2 286 147-460 99-398 (399)
34 KOG0281 Beta-TrCP (transducin 100.0 5.4E-38 1.2E-42 277.6 16.4 268 212-501 196-477 (499)
35 cd00200 WD40 WD40 domain, foun 100.0 5.3E-35 1.1E-39 275.9 37.9 280 211-499 7-289 (289)
36 KOG0293 WD40 repeat-containing 100.0 1.1E-36 2.3E-41 275.0 24.8 301 139-461 209-514 (519)
37 KOG0276 Vesicle coat complex C 100.0 1.8E-36 3.9E-41 286.6 25.2 285 149-497 8-295 (794)
38 KOG0315 G-protein beta subunit 100.0 1.1E-34 2.4E-39 245.8 29.8 265 226-501 11-288 (311)
39 KOG0316 Conserved WD40 repeat- 100.0 4.3E-35 9.4E-40 246.3 26.9 290 141-458 4-297 (307)
40 KOG0316 Conserved WD40 repeat- 100.0 4.6E-35 1E-39 246.2 23.3 241 247-500 10-256 (307)
41 KOG0288 WD40 repeat protein Ti 100.0 4.4E-36 9.5E-41 271.3 18.4 289 141-498 162-458 (459)
42 KOG0772 Uncharacterized conser 100.0 1.1E-34 2.4E-39 268.9 27.8 304 139-498 152-484 (641)
43 KOG1407 WD40 repeat protein [F 100.0 3.4E-34 7.4E-39 244.5 28.2 283 208-500 15-310 (313)
44 KOG0281 Beta-TrCP (transducin 100.0 3.1E-36 6.8E-41 266.4 16.3 273 153-464 196-481 (499)
45 KOG0282 mRNA splicing factor [ 100.0 1E-35 2.2E-40 274.2 18.8 283 207-499 208-503 (503)
46 KOG0285 Pleiotropic regulator 100.0 5.9E-35 1.3E-39 259.3 22.4 245 246-501 143-389 (460)
47 KOG0313 Microtubule binding pr 100.0 2.3E-34 5E-39 257.6 26.2 278 153-460 104-418 (423)
48 KOG0306 WD40-repeat-containing 100.0 7.4E-34 1.6E-38 274.3 30.8 294 148-499 367-662 (888)
49 KOG0295 WD40 repeat-containing 100.0 1.1E-34 2.5E-39 258.3 20.9 254 239-501 93-364 (406)
50 KOG0292 Vesicle coat complex C 100.0 7.8E-34 1.7E-38 278.3 27.8 279 212-500 8-320 (1202)
51 KOG0306 WD40-repeat-containing 100.0 2.2E-32 4.8E-37 264.1 34.3 320 154-501 65-580 (888)
52 KOG0275 Conserved WD40 repeat- 100.0 3.7E-34 8.1E-39 251.2 20.0 289 152-499 211-507 (508)
53 KOG0292 Vesicle coat complex C 100.0 1.2E-32 2.6E-37 270.0 32.3 284 150-460 5-321 (1202)
54 KOG0266 WD40 repeat-containing 100.0 6.5E-33 1.4E-37 277.2 31.2 240 213-501 159-409 (456)
55 KOG0973 Histone transcription 100.0 3.9E-33 8.6E-38 280.8 29.3 294 153-501 12-355 (942)
56 KOG1407 WD40 repeat protein [F 100.0 1.8E-32 3.9E-37 234.0 28.4 277 148-451 14-293 (313)
57 KOG0313 Microtubule binding pr 100.0 8.4E-33 1.8E-37 247.7 26.8 274 212-499 104-416 (423)
58 KOG0645 WD40 repeat protein [G 100.0 3E-32 6.6E-37 233.9 29.0 236 211-499 12-259 (312)
59 KOG0293 WD40 repeat-containing 100.0 3.2E-33 7E-38 252.6 24.1 280 210-500 221-512 (519)
60 KOG0643 Translation initiation 100.0 3.9E-31 8.5E-36 226.6 28.2 280 211-501 8-317 (327)
61 KOG0274 Cdc4 and related F-box 100.0 1.3E-31 2.9E-36 266.8 29.2 272 212-502 207-483 (537)
62 KOG0283 WD40 repeat-containing 100.0 4.9E-32 1.1E-36 266.4 24.8 292 152-500 265-575 (712)
63 KOG0277 Peroxisomal targeting 100.0 5.7E-32 1.2E-36 230.1 21.4 275 217-499 12-307 (311)
64 KOG0274 Cdc4 and related F-box 100.0 3.3E-31 7.1E-36 264.0 29.9 285 149-468 202-490 (537)
65 KOG0277 Peroxisomal targeting 100.0 1.6E-31 3.5E-36 227.4 22.5 279 158-459 12-308 (311)
66 KOG0640 mRNA cleavage stimulat 100.0 2.3E-31 4.9E-36 232.4 23.8 304 142-500 100-425 (430)
67 KOG0278 Serine/threonine kinas 100.0 4.2E-32 9.1E-37 230.3 18.0 282 149-500 9-296 (334)
68 KOG1063 RNA polymerase II elon 100.0 1.3E-30 2.8E-35 250.0 30.1 335 148-501 261-699 (764)
69 KOG0641 WD40 repeat protein [G 100.0 4.1E-29 8.8E-34 209.2 34.5 294 153-460 31-349 (350)
70 KOG0310 Conserved WD40 repeat- 100.0 6.3E-31 1.4E-35 243.1 26.0 274 213-498 26-306 (487)
71 KOG0643 Translation initiation 100.0 3.9E-31 8.5E-36 226.6 22.4 287 148-460 4-317 (327)
72 PLN00181 protein SPA1-RELATED; 100.0 5.9E-30 1.3E-34 274.7 36.9 238 210-500 480-737 (793)
73 PTZ00421 coronin; Provisional 100.0 4.5E-30 9.7E-35 255.7 33.0 276 153-482 19-314 (493)
74 KOG1446 Histone H3 (Lys4) meth 100.0 2.8E-29 6E-34 220.9 33.5 278 150-498 10-300 (311)
75 KOG0276 Vesicle coat complex C 100.0 3E-31 6.5E-36 251.3 22.6 245 248-500 7-256 (794)
76 KOG0647 mRNA export protein (c 100.0 4.2E-30 9.2E-35 224.0 27.7 271 152-491 25-313 (347)
77 KOG0305 Anaphase promoting com 100.0 2.6E-30 5.6E-35 248.2 28.8 272 217-500 181-460 (484)
78 KOG0268 Sof1-like rRNA process 100.0 1.2E-31 2.6E-36 238.8 16.6 280 205-500 58-344 (433)
79 PTZ00421 coronin; Provisional 100.0 1.6E-29 3.4E-34 251.8 33.5 244 215-501 22-290 (493)
80 KOG0641 WD40 repeat protein [G 100.0 8.1E-29 1.8E-33 207.4 32.1 278 213-500 32-348 (350)
81 KOG1539 WD repeat protein [Gen 100.0 3.3E-28 7.2E-33 238.0 39.2 329 144-498 192-645 (910)
82 KOG0278 Serine/threonine kinas 100.0 1.2E-30 2.5E-35 221.6 16.1 247 147-464 52-301 (334)
83 KOG0289 mRNA splicing factor [ 100.0 8.6E-29 1.9E-33 225.5 28.1 282 154-500 219-505 (506)
84 KOG0973 Histone transcription 100.0 3.1E-29 6.7E-34 252.8 27.1 283 145-463 60-358 (942)
85 KOG0268 Sof1-like rRNA process 100.0 1.8E-30 3.9E-35 231.4 15.9 285 148-464 60-349 (433)
86 KOG0299 U3 snoRNP-associated p 100.0 5.8E-29 1.3E-33 228.4 25.9 269 212-491 141-445 (479)
87 KOG0301 Phospholipase A2-activ 100.0 6.1E-29 1.3E-33 238.7 27.1 278 148-460 8-288 (745)
88 KOG0300 WD40 repeat-containing 100.0 1.6E-29 3.5E-34 221.5 21.1 285 147-500 141-475 (481)
89 PTZ00420 coronin; Provisional 100.0 5.6E-28 1.2E-32 241.7 34.5 245 171-483 49-318 (568)
90 KOG1036 Mitotic spindle checkp 100.0 4.7E-28 1E-32 212.1 27.9 266 154-491 13-294 (323)
91 KOG0305 Anaphase promoting com 100.0 1.9E-28 4.2E-33 235.3 27.9 276 158-462 181-463 (484)
92 KOG0294 WD40 repeat-containing 100.0 3.6E-28 7.8E-33 213.2 27.0 261 145-478 34-304 (362)
93 KOG2096 WD40 repeat protein [G 100.0 3.4E-28 7.3E-33 213.5 26.4 292 142-458 74-400 (420)
94 PTZ00420 coronin; Provisional 100.0 1.1E-27 2.3E-32 239.7 33.4 227 231-501 50-293 (568)
95 KOG0301 Phospholipase A2-activ 100.0 2.7E-28 5.8E-33 234.3 27.3 273 209-501 10-288 (745)
96 KOG0308 Conserved WD40 repeat- 100.0 3.8E-29 8.2E-34 238.4 20.2 296 152-500 19-326 (735)
97 KOG1063 RNA polymerase II elon 100.0 1.2E-27 2.6E-32 229.7 30.0 345 146-500 183-647 (764)
98 KOG0310 Conserved WD40 repeat- 100.0 1.3E-27 2.9E-32 221.2 28.0 276 154-459 26-308 (487)
99 KOG1408 WD40 repeat protein [F 100.0 1.3E-27 2.9E-32 229.7 28.6 329 157-500 327-712 (1080)
100 KOG1446 Histone H3 (Lys4) meth 100.0 6.1E-27 1.3E-31 206.2 29.2 242 249-501 9-262 (311)
101 KOG0639 Transducin-like enhanc 100.0 3.3E-28 7.1E-33 225.3 21.4 284 152-500 417-703 (705)
102 KOG0289 mRNA splicing factor [ 100.0 1.4E-27 3.1E-32 217.6 24.0 236 213-498 219-459 (506)
103 KOG0275 Conserved WD40 repeat- 100.0 4.1E-28 8.8E-33 213.3 18.4 239 212-500 212-466 (508)
104 KOG0640 mRNA cleavage stimulat 100.0 9.2E-28 2E-32 210.0 18.7 213 211-471 110-346 (430)
105 KOG0300 WD40 repeat-containing 100.0 3E-27 6.4E-32 207.4 21.8 274 208-500 143-427 (481)
106 KOG2106 Uncharacterized conser 100.0 2.5E-25 5.4E-30 206.5 35.6 337 146-498 96-518 (626)
107 KOG1332 Vesicle coat complex C 100.0 1.5E-27 3.3E-32 202.1 19.2 254 149-460 6-286 (299)
108 KOG0772 Uncharacterized conser 100.0 1E-27 2.2E-32 222.8 19.5 252 211-500 165-444 (641)
109 KOG1332 Vesicle coat complex C 100.0 1.3E-27 2.8E-32 202.5 18.0 247 212-499 10-284 (299)
110 KOG0288 WD40 repeat protein Ti 100.0 2.8E-28 6E-33 221.0 14.7 241 248-501 169-417 (459)
111 KOG0294 WD40 repeat-containing 100.0 2E-26 4.4E-31 202.2 25.9 260 228-502 4-282 (362)
112 KOG0650 WD40 repeat nucleolar 100.0 3E-27 6.5E-32 223.4 21.8 293 138-457 384-732 (733)
113 KOG0264 Nucleosome remodeling 100.0 1.1E-26 2.4E-31 213.5 24.4 256 151-460 121-404 (422)
114 KOG0308 Conserved WD40 repeat- 100.0 2.9E-27 6.3E-32 225.6 18.9 231 223-501 35-285 (735)
115 KOG1408 WD40 repeat protein [F 100.0 8.2E-27 1.8E-31 224.3 22.1 303 150-461 365-714 (1080)
116 KOG0264 Nucleosome remodeling 100.0 1.8E-26 3.8E-31 212.2 21.7 248 211-500 122-403 (422)
117 KOG4283 Transcription-coupled 99.9 1.4E-25 3E-30 195.1 25.8 301 149-459 38-364 (397)
118 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 2.3E-24 5.1E-29 205.9 37.0 286 166-481 1-300 (300)
119 KOG2445 Nuclear pore complex c 99.9 3.4E-25 7.3E-30 194.0 27.0 282 150-480 9-341 (361)
120 KOG0269 WD40 repeat-containing 99.9 1.1E-26 2.4E-31 225.7 19.5 287 157-463 42-343 (839)
121 KOG2096 WD40 repeat protein [G 99.9 3.1E-25 6.8E-30 194.9 25.4 275 211-498 84-399 (420)
122 KOG1274 WD40 repeat protein [G 99.9 6.4E-25 1.4E-29 217.6 30.2 271 212-496 12-295 (933)
123 KOG2055 WD40 repeat protein [G 99.9 2.6E-25 5.7E-30 204.4 25.1 282 154-501 213-512 (514)
124 KOG0283 WD40 repeat-containing 99.9 7.2E-26 1.6E-30 223.2 22.2 242 249-501 261-532 (712)
125 TIGR03866 PQQ_ABC_repeats PQQ- 99.9 7.8E-24 1.7E-28 202.3 35.3 264 226-501 2-279 (300)
126 KOG0647 mRNA export protein (c 99.9 6.5E-25 1.4E-29 191.7 23.3 237 211-501 25-281 (347)
127 KOG1274 WD40 repeat protein [G 99.9 1.1E-24 2.3E-29 216.0 26.5 241 251-501 10-262 (933)
128 KOG0267 Microtubule severing p 99.9 8.6E-27 1.9E-31 224.9 11.1 256 165-452 3-260 (825)
129 KOG0267 Microtubule severing p 99.9 1.4E-26 3.1E-31 223.3 11.3 252 227-492 6-259 (825)
130 KOG1539 WD repeat protein [Gen 99.9 2E-23 4.4E-28 204.8 32.8 325 149-500 154-605 (910)
131 KOG0646 WD40 repeat protein [G 99.9 1.1E-24 2.4E-29 200.8 21.8 229 213-483 81-331 (476)
132 KOG0269 WD40 repeat-containing 99.9 4.3E-25 9.2E-30 214.8 18.1 237 257-502 42-297 (839)
133 KOG1273 WD40 repeat protein [G 99.9 8.6E-24 1.9E-28 185.7 23.9 273 216-500 26-321 (405)
134 KOG2048 WD40 repeat protein [G 99.9 1.9E-22 4.1E-27 194.0 35.1 224 148-389 62-301 (691)
135 KOG2106 Uncharacterized conser 99.9 1.8E-22 3.9E-27 187.7 31.8 314 155-500 247-625 (626)
136 KOG4283 Transcription-coupled 99.9 3.8E-23 8.2E-28 180.0 25.4 276 212-498 42-362 (397)
137 KOG2048 WD40 repeat protein [G 99.9 1.3E-22 2.7E-27 195.2 31.4 278 154-498 25-316 (691)
138 KOG1445 Tumor-specific antigen 99.9 1.1E-23 2.3E-28 200.5 22.6 152 340-500 630-797 (1012)
139 KOG4378 Nuclear protein COP1 [ 99.9 7.7E-24 1.7E-28 196.2 20.4 267 172-502 8-281 (673)
140 KOG0646 WD40 repeat protein [G 99.9 6E-23 1.3E-27 189.4 25.0 263 230-501 12-307 (476)
141 KOG0302 Ribosome Assembly prot 99.9 2.3E-23 5E-28 187.2 21.1 257 149-495 146-433 (440)
142 KOG2445 Nuclear pore complex c 99.9 1.3E-22 2.9E-27 177.8 25.1 243 250-499 9-316 (361)
143 KOG0642 Cell-cycle nuclear pro 99.9 6.6E-24 1.4E-28 200.1 17.6 267 146-431 286-574 (577)
144 KOG2919 Guanine nucleotide-bin 99.9 7.7E-23 1.7E-27 180.3 23.1 288 158-493 53-362 (406)
145 COG2319 FOG: WD40 repeat [Gene 99.9 2.5E-20 5.4E-25 186.0 44.0 327 149-501 60-400 (466)
146 KOG1034 Transcriptional repres 99.9 4E-22 8.6E-27 176.3 24.5 297 148-501 32-383 (385)
147 KOG0270 WD40 repeat-containing 99.9 9.4E-23 2E-27 187.0 20.3 237 216-501 176-449 (463)
148 KOG1036 Mitotic spindle checkp 99.9 6.7E-22 1.5E-26 173.7 24.5 235 212-501 12-262 (323)
149 KOG1273 WD40 repeat protein [G 99.9 1.2E-21 2.6E-26 172.3 25.2 289 142-460 13-322 (405)
150 KOG0302 Ribosome Assembly prot 99.9 1.4E-22 3E-27 182.2 19.3 219 249-501 146-378 (440)
151 KOG0639 Transducin-like enhanc 99.9 5.2E-23 1.1E-27 191.0 17.1 236 156-459 467-703 (705)
152 KOG4328 WD40 protein [Function 99.9 6.9E-22 1.5E-26 181.9 23.7 279 211-499 184-493 (498)
153 KOG1009 Chromatin assembly com 99.9 1.1E-21 2.3E-26 178.2 24.3 314 154-500 13-371 (434)
154 KOG4328 WD40 protein [Function 99.9 2.7E-21 5.8E-26 178.1 24.5 290 148-460 180-495 (498)
155 COG2319 FOG: WD40 repeat [Gene 99.9 4.8E-19 1E-23 176.7 43.0 327 147-501 101-442 (466)
156 KOG0321 WD40 repeat-containing 99.9 2E-21 4.3E-26 185.7 23.9 267 225-500 64-390 (720)
157 KOG0321 WD40 repeat-containing 99.9 1.4E-21 3.1E-26 186.6 22.5 285 158-462 53-393 (720)
158 KOG0322 G-protein beta subunit 99.9 2.3E-22 5E-27 172.7 15.2 287 142-459 2-322 (323)
159 KOG0307 Vesicle coat complex C 99.9 1.7E-22 3.8E-27 205.2 16.5 242 214-463 65-330 (1049)
160 KOG1538 Uncharacterized conser 99.9 3.1E-21 6.7E-26 184.9 23.9 275 156-500 14-292 (1081)
161 KOG0270 WD40 repeat-containing 99.9 1.8E-21 4E-26 178.6 19.9 249 166-423 192-454 (463)
162 KOG0650 WD40 repeat nucleolar 99.9 7.6E-21 1.6E-25 180.4 24.6 280 209-498 396-732 (733)
163 KOG2055 WD40 repeat protein [G 99.9 3.7E-21 8E-26 177.3 20.2 232 211-491 211-455 (514)
164 KOG4227 WD40 repeat protein [G 99.9 9.2E-21 2E-25 171.1 22.0 292 148-460 50-387 (609)
165 KOG1009 Chromatin assembly com 99.9 5E-20 1.1E-24 167.4 24.3 293 148-464 59-376 (434)
166 KOG4378 Nuclear protein COP1 [ 99.9 9.5E-21 2.1E-25 175.9 19.8 262 156-442 36-305 (673)
167 KOG0644 Uncharacterized conser 99.9 7.9E-22 1.7E-26 193.4 13.2 282 147-500 183-467 (1113)
168 KOG0307 Vesicle coat complex C 99.9 1.7E-21 3.8E-26 198.0 15.3 275 218-501 11-327 (1049)
169 KOG1007 WD repeat protein TSSC 99.9 4.5E-20 9.8E-25 160.6 19.7 255 149-460 58-361 (370)
170 KOG1587 Cytoplasmic dynein int 99.9 1.9E-19 4.2E-24 178.4 26.0 241 213-461 242-517 (555)
171 KOG2919 Guanine nucleotide-bin 99.8 2E-19 4.4E-24 158.9 20.8 237 216-501 52-327 (406)
172 KOG1524 WD40 repeat-containing 99.8 1.7E-19 3.7E-24 169.2 20.6 272 153-458 13-284 (737)
173 KOG0649 WD40 repeat protein [G 99.8 4.3E-18 9.3E-23 144.9 26.5 267 216-501 13-317 (325)
174 KOG1963 WD40 repeat protein [G 99.8 6.5E-18 1.4E-22 167.9 31.8 279 211-501 203-538 (792)
175 KOG1007 WD repeat protein TSSC 99.8 8.8E-19 1.9E-23 152.6 22.2 258 234-500 39-360 (370)
176 KOG0642 Cell-cycle nuclear pro 99.8 7E-20 1.5E-24 173.1 15.8 223 211-466 292-567 (577)
177 KOG1538 Uncharacterized conser 99.8 3.2E-17 6.8E-22 157.7 32.5 219 146-366 45-292 (1081)
178 KOG0290 Conserved WD40 repeat- 99.8 2.9E-18 6.4E-23 149.5 22.9 277 155-493 45-358 (364)
179 KOG0322 G-protein beta subunit 99.8 6.9E-19 1.5E-23 151.4 17.6 276 211-500 12-322 (323)
180 KOG0303 Actin-binding protein 99.8 1.3E-18 2.8E-23 157.6 20.2 209 249-501 76-294 (472)
181 KOG1034 Transcriptional repres 99.8 3.6E-19 7.8E-24 157.7 16.1 267 153-460 88-383 (385)
182 KOG1963 WD40 repeat protein [G 99.8 5.1E-18 1.1E-22 168.7 25.9 328 152-500 203-582 (792)
183 KOG1517 Guanine nucleotide bin 99.8 9.1E-18 2E-22 169.1 26.5 283 154-500 1064-1380(1387)
184 KOG1524 WD40 repeat-containing 99.8 2.9E-18 6.4E-23 161.0 20.1 262 211-497 12-282 (737)
185 PRK11028 6-phosphogluconolacto 99.8 1.7E-16 3.7E-21 153.6 33.5 270 170-501 6-304 (330)
186 KOG1587 Cytoplasmic dynein int 99.8 4.5E-17 9.8E-22 161.7 27.9 257 235-500 222-515 (555)
187 KOG1188 WD40 repeat protein [G 99.8 1.2E-17 2.7E-22 148.9 19.1 265 226-499 41-344 (376)
188 KOG1523 Actin-related protein 99.8 2.1E-17 4.4E-22 146.3 20.2 231 213-491 10-269 (361)
189 KOG0303 Actin-binding protein 99.8 1.3E-17 2.9E-22 151.2 18.0 211 148-370 75-297 (472)
190 KOG2110 Uncharacterized conser 99.8 6.5E-16 1.4E-20 139.4 27.9 232 214-501 6-248 (391)
191 KOG1334 WD40 repeat protein [G 99.8 4.4E-18 9.5E-23 158.2 14.2 290 148-462 136-468 (559)
192 KOG4497 Uncharacterized conser 99.8 1.3E-16 2.7E-21 141.7 22.4 265 211-495 89-426 (447)
193 PRK01742 tolB translocation pr 99.8 9E-17 1.9E-21 160.5 23.0 213 213-482 203-426 (429)
194 PRK01742 tolB translocation pr 99.8 7.5E-17 1.6E-21 161.1 21.4 211 234-500 183-400 (429)
195 KOG0649 WD40 repeat protein [G 99.8 1.8E-15 3.8E-20 129.1 26.2 277 156-458 12-314 (325)
196 KOG2110 Uncharacterized conser 99.8 2.4E-15 5.2E-20 135.8 28.5 312 154-500 5-329 (391)
197 KOG1272 WD40-repeat-containing 99.8 4.1E-18 8.9E-23 157.5 11.0 227 258-498 133-359 (545)
198 KOG0290 Conserved WD40 repeat- 99.8 2.2E-16 4.7E-21 138.0 20.4 229 152-391 94-347 (364)
199 PRK11028 6-phosphogluconolacto 99.7 4.4E-15 9.5E-20 143.8 30.2 266 154-479 34-327 (330)
200 KOG1310 WD40 repeat protein [G 99.7 4.1E-16 8.8E-21 147.1 21.7 205 148-368 44-304 (758)
201 KOG2111 Uncharacterized conser 99.7 2.8E-15 6E-20 132.9 25.0 235 256-501 7-256 (346)
202 KOG1517 Guanine nucleotide bin 99.7 4.3E-16 9.4E-21 157.2 21.9 256 154-463 1109-1384(1387)
203 KOG1523 Actin-related protein 99.7 2.2E-15 4.8E-20 133.5 22.5 237 154-451 10-269 (361)
204 KOG0771 Prolactin regulatory e 99.7 1.9E-15 4.1E-20 138.9 22.9 195 300-500 148-353 (398)
205 PF02239 Cytochrom_D1: Cytochr 99.7 1.5E-14 3.3E-19 139.9 28.1 304 170-500 10-346 (369)
206 KOG2139 WD40 repeat protein [G 99.7 2.9E-14 6.2E-19 128.5 27.0 275 156-500 100-430 (445)
207 KOG0644 Uncharacterized conser 99.7 4.7E-17 1E-21 160.3 9.6 233 249-500 185-425 (1113)
208 KOG0771 Prolactin regulatory e 99.7 5.9E-16 1.3E-20 142.2 16.1 195 217-460 148-354 (398)
209 KOG1272 WD40-repeat-containing 99.7 1.2E-16 2.6E-21 147.9 11.5 268 156-455 131-404 (545)
210 KOG3881 Uncharacterized conser 99.7 1.1E-14 2.3E-19 132.5 22.7 275 154-483 55-343 (412)
211 KOG2394 WD40 protein DMR-N9 [G 99.7 1.3E-15 2.9E-20 143.5 17.1 196 222-440 182-384 (636)
212 KOG1445 Tumor-specific antigen 99.7 9.2E-16 2E-20 147.0 16.2 233 224-500 590-843 (1012)
213 KOG1240 Protein kinase contain 99.7 1.6E-14 3.5E-19 148.3 26.0 303 145-458 1039-1431(1431)
214 KOG1334 WD40 repeat protein [G 99.7 6.2E-16 1.3E-20 144.1 14.5 282 209-499 138-464 (559)
215 PF08662 eIF2A: Eukaryotic tra 99.7 9.6E-15 2.1E-19 128.5 20.5 150 341-501 9-179 (194)
216 KOG1188 WD40 repeat protein [G 99.7 2.6E-15 5.6E-20 134.2 16.5 185 308-501 41-242 (376)
217 KOG2139 WD40 repeat protein [G 99.7 3E-14 6.4E-19 128.4 22.2 242 213-494 98-368 (445)
218 PRK05137 tolB translocation pr 99.7 1.1E-13 2.3E-18 138.9 28.7 213 235-500 182-411 (435)
219 KOG4227 WD40 repeat protein [G 99.7 6.9E-14 1.5E-18 127.1 24.3 278 210-498 53-384 (609)
220 KOG2111 Uncharacterized conser 99.7 1.4E-12 3E-17 116.0 31.7 234 215-461 7-257 (346)
221 PRK04922 tolB translocation pr 99.6 6.2E-14 1.3E-18 140.4 25.7 213 235-500 184-410 (433)
222 PRK03629 tolB translocation pr 99.6 1.9E-13 4.1E-18 136.3 29.0 216 213-482 198-428 (429)
223 PRK05137 tolB translocation pr 99.6 2.8E-13 6.1E-18 135.9 28.7 215 213-482 201-433 (435)
224 PRK03629 tolB translocation pr 99.6 3.5E-13 7.5E-18 134.4 29.1 212 235-499 179-404 (429)
225 PRK02889 tolB translocation pr 99.6 7.8E-14 1.7E-18 139.2 24.1 206 235-493 176-392 (427)
226 PRK04922 tolB translocation pr 99.6 1.5E-13 3.3E-18 137.6 26.2 214 213-481 203-432 (433)
227 KOG2321 WD40 repeat protein [G 99.6 8.3E-14 1.8E-18 132.5 22.4 273 212-498 50-340 (703)
228 KOG1310 WD40 repeat protein [G 99.6 6.5E-15 1.4E-19 139.1 14.5 215 246-468 42-311 (758)
229 KOG1354 Serine/threonine prote 99.6 5.4E-14 1.2E-18 125.9 18.6 269 213-500 25-358 (433)
230 PRK02889 tolB translocation pr 99.6 2.8E-13 6E-18 135.3 26.0 215 213-482 195-425 (427)
231 KOG1409 Uncharacterized conser 99.6 1.2E-13 2.5E-18 123.8 19.2 326 148-501 18-394 (404)
232 PF08662 eIF2A: Eukaryotic tra 99.6 3.3E-13 7.2E-18 118.8 21.7 117 336-467 58-185 (194)
233 COG5354 Uncharacterized protei 99.6 2.8E-12 6.1E-17 120.8 27.7 313 153-500 31-394 (561)
234 KOG2315 Predicted translation 99.6 1.9E-11 4.1E-16 116.7 32.8 310 156-500 36-389 (566)
235 KOG1354 Serine/threonine prote 99.6 4.6E-13 1E-17 120.0 19.9 314 155-498 26-431 (433)
236 KOG4497 Uncharacterized conser 99.6 8.8E-13 1.9E-17 117.5 20.4 271 218-499 13-389 (447)
237 KOG2321 WD40 repeat protein [G 99.5 2.5E-12 5.5E-17 122.6 23.9 280 153-460 50-343 (703)
238 KOG0974 WD-repeat protein WDR6 99.5 4.8E-13 1E-17 135.9 20.2 193 257-461 90-289 (967)
239 KOG2041 WD40 repeat protein [G 99.5 2.7E-12 5.9E-17 125.2 24.1 297 155-501 15-337 (1189)
240 TIGR02800 propeller_TolB tol-p 99.5 6.9E-12 1.5E-16 125.7 27.8 206 235-493 170-386 (417)
241 PF02239 Cytochrom_D1: Cytochr 99.5 4.6E-11 1E-15 115.8 32.1 284 158-469 40-356 (369)
242 KOG1240 Protein kinase contain 99.5 2.8E-12 6.2E-17 132.2 24.2 252 240-500 1034-1333(1431)
243 TIGR02800 propeller_TolB tol-p 99.5 1.7E-11 3.7E-16 122.9 28.0 213 213-480 189-417 (417)
244 KOG2394 WD40 protein DMR-N9 [G 99.5 1.4E-12 3E-17 123.5 17.3 242 213-480 123-383 (636)
245 KOG2314 Translation initiation 99.5 3.3E-11 7.2E-16 114.7 26.6 314 158-501 214-573 (698)
246 PRK00178 tolB translocation pr 99.5 4.1E-11 8.9E-16 120.4 28.4 212 236-500 180-405 (430)
247 KOG0974 WD-repeat protein WDR6 99.5 7.8E-11 1.7E-15 120.2 29.5 199 155-368 88-289 (967)
248 PRK01029 tolB translocation pr 99.5 3.1E-11 6.6E-16 120.1 26.4 222 215-483 186-426 (428)
249 PRK01029 tolB translocation pr 99.5 3.6E-11 7.8E-16 119.6 26.5 216 235-500 165-402 (428)
250 KOG4547 WD40 repeat-containing 99.5 1.7E-11 3.6E-16 117.8 22.9 188 263-461 2-221 (541)
251 KOG3881 Uncharacterized conser 99.5 1.5E-11 3.2E-16 112.3 21.3 238 255-501 56-320 (412)
252 KOG2315 Predicted translation 99.4 2.9E-11 6.3E-16 115.4 22.8 292 156-481 75-410 (566)
253 PRK00178 tolB translocation pr 99.4 6E-11 1.3E-15 119.2 26.2 216 213-482 198-428 (430)
254 PRK04792 tolB translocation pr 99.4 8.5E-11 1.9E-15 117.8 26.8 212 236-500 199-424 (448)
255 PRK04792 tolB translocation pr 99.4 1.6E-10 3.4E-15 115.9 27.4 216 213-482 217-447 (448)
256 PF10282 Lactonase: Lactonase, 99.4 1.5E-08 3.3E-13 98.3 38.5 265 228-501 2-322 (345)
257 KOG0280 Uncharacterized conser 99.4 2.5E-10 5.4E-15 100.7 22.3 236 214-498 70-330 (339)
258 PF10282 Lactonase: Lactonase, 99.4 8.2E-08 1.8E-12 93.2 41.4 258 214-479 37-345 (345)
259 KOG0280 Uncharacterized conser 99.3 9.9E-11 2.1E-15 103.2 18.2 181 310-499 88-282 (339)
260 KOG1064 RAVE (regulator of V-A 99.3 6.1E-12 1.3E-16 133.9 12.5 201 150-427 2204-2407(2439)
261 TIGR03300 assembly_YfgL outer 99.3 1.4E-08 3E-13 100.3 34.8 295 165-498 64-376 (377)
262 PF04762 IKI3: IKI3 family; I 99.3 6.7E-09 1.5E-13 111.6 34.3 274 212-501 74-379 (928)
263 KOG1064 RAVE (regulator of V-A 99.3 1.1E-11 2.3E-16 132.2 12.6 246 224-494 2179-2439(2439)
264 KOG2314 Translation initiation 99.3 8.3E-10 1.8E-14 105.3 23.8 274 216-501 213-525 (698)
265 TIGR02658 TTQ_MADH_Hv methylam 99.3 6.8E-08 1.5E-12 91.8 36.7 240 221-471 53-341 (352)
266 PF04762 IKI3: IKI3 family; I 99.3 3.4E-08 7.5E-13 106.3 38.7 319 153-500 74-518 (928)
267 KOG2041 WD40 repeat protein [G 99.3 1.7E-09 3.6E-14 106.2 25.2 224 148-391 65-320 (1189)
268 PLN02919 haloacid dehalogenase 99.3 4.6E-09 1E-13 115.0 31.4 249 217-501 571-888 (1057)
269 KOG4547 WD40 repeat-containing 99.2 1.9E-09 4.2E-14 103.9 21.6 189 163-367 2-220 (541)
270 KOG4190 Uncharacterized conser 99.2 9.7E-11 2.1E-15 111.4 11.9 290 147-497 728-1032(1034)
271 COG5354 Uncharacterized protei 99.2 5.1E-09 1.1E-13 99.2 22.8 263 212-488 31-332 (561)
272 PLN02919 haloacid dehalogenase 99.2 2.2E-08 4.8E-13 109.7 30.9 266 158-464 571-892 (1057)
273 TIGR02658 TTQ_MADH_Hv methylam 99.2 3.4E-07 7.4E-12 87.1 34.7 244 235-501 27-330 (352)
274 COG5170 CDC55 Serine/threonine 99.2 1.8E-09 3.9E-14 96.0 16.2 267 213-498 26-364 (460)
275 KOG4190 Uncharacterized conser 99.1 1.5E-10 3.3E-15 110.1 9.2 210 247-467 728-955 (1034)
276 COG2706 3-carboxymuconate cycl 99.1 6.7E-07 1.5E-11 82.0 31.8 259 234-500 15-320 (346)
277 KOG0309 Conserved WD40 repeat- 99.1 1.2E-09 2.5E-14 107.6 14.1 291 154-461 24-340 (1081)
278 PRK04043 tolB translocation pr 99.1 1.7E-07 3.8E-12 92.7 28.8 201 236-492 170-388 (419)
279 TIGR03300 assembly_YfgL outer 99.1 1.2E-07 2.5E-12 93.7 27.4 259 225-501 65-338 (377)
280 KOG0882 Cyclophilin-related pe 99.1 9.4E-09 2E-13 95.9 16.6 267 221-498 16-369 (558)
281 PF15492 Nbas_N: Neuroblastoma 99.0 5.8E-07 1.3E-11 80.0 26.8 235 160-470 3-269 (282)
282 KOG1409 Uncharacterized conser 99.0 8.6E-09 1.9E-13 93.1 15.1 240 211-462 22-272 (404)
283 PF08450 SGL: SMP-30/Gluconola 99.0 2.7E-06 5.9E-11 78.5 32.6 221 218-490 4-244 (246)
284 COG2706 3-carboxymuconate cycl 99.0 4.6E-06 9.9E-11 76.7 32.6 267 152-480 37-345 (346)
285 KOG1832 HIV-1 Vpr-binding prot 99.0 4.4E-10 9.6E-15 112.5 6.5 265 147-491 1094-1379(1516)
286 COG4946 Uncharacterized protei 99.0 4E-07 8.6E-12 85.9 25.3 215 262-491 274-508 (668)
287 KOG4532 WD40-like repeat conta 99.0 2.7E-07 5.9E-12 80.8 22.3 215 266-491 84-322 (344)
288 PRK04043 tolB translocation pr 99.0 3.8E-07 8.3E-12 90.3 26.4 210 215-479 189-419 (419)
289 KOG1920 IkappaB kinase complex 99.0 8.5E-07 1.9E-11 92.9 29.0 272 214-500 69-364 (1265)
290 KOG1912 WD40 repeat protein [G 99.0 3.8E-07 8.2E-12 90.9 24.8 328 155-501 16-551 (1062)
291 COG5170 CDC55 Serine/threonine 98.9 3.7E-08 7.9E-13 87.8 14.5 276 155-458 27-365 (460)
292 KOG3914 WD repeat protein WDR4 98.9 1.9E-08 4E-13 92.9 13.0 167 158-376 66-232 (390)
293 PRK11138 outer membrane biogen 98.9 4.5E-06 9.7E-11 82.9 30.8 304 166-500 69-393 (394)
294 PF13360 PQQ_2: PQQ-like domai 98.9 2E-06 4.4E-11 78.9 26.1 216 234-467 2-237 (238)
295 KOG3914 WD repeat protein WDR4 98.9 5.4E-08 1.2E-12 89.9 14.7 86 331-426 145-231 (390)
296 PF00400 WD40: WD domain, G-be 98.9 6E-09 1.3E-13 65.6 5.3 37 146-182 3-39 (39)
297 PF00400 WD40: WD domain, G-be 98.8 1.1E-08 2.4E-13 64.3 6.4 39 420-458 1-39 (39)
298 PF15492 Nbas_N: Neuroblastoma 98.8 3.1E-06 6.7E-11 75.5 21.7 192 157-377 46-269 (282)
299 KOG2695 WD40 repeat protein [G 98.8 4.1E-08 8.8E-13 88.8 9.9 158 314-481 231-402 (425)
300 COG4946 Uncharacterized protei 98.8 1.5E-05 3.3E-10 75.5 26.9 307 162-501 327-654 (668)
301 KOG4532 WD40-like repeat conta 98.8 3E-06 6.5E-11 74.5 20.2 229 224-460 83-331 (344)
302 KOG0309 Conserved WD40 repeat- 98.7 1.2E-07 2.6E-12 93.8 12.9 278 213-500 24-338 (1081)
303 PF13360 PQQ_2: PQQ-like domai 98.7 1E-05 2.2E-10 74.3 25.0 211 275-501 2-230 (238)
304 KOG2695 WD40 repeat protein [G 98.7 5.7E-08 1.2E-12 87.9 9.4 156 220-377 218-386 (425)
305 KOG1275 PAB-dependent poly(A) 98.7 3.3E-07 7.3E-12 92.9 15.8 183 265-459 146-341 (1118)
306 KOG4714 Nucleoporin [Nuclear s 98.6 1.2E-06 2.7E-11 76.5 13.9 161 248-419 83-255 (319)
307 PF08450 SGL: SMP-30/Gluconola 98.6 0.00022 4.9E-09 65.7 29.5 213 159-446 4-241 (246)
308 KOG1912 WD40 repeat protein [G 98.6 1.2E-06 2.5E-11 87.6 14.4 159 339-499 17-184 (1062)
309 KOG1275 PAB-dependent poly(A) 98.6 1.8E-06 3.8E-11 87.8 15.3 178 308-499 148-340 (1118)
310 KOG1832 HIV-1 Vpr-binding prot 98.6 4.5E-08 9.9E-13 98.5 4.1 217 249-490 1096-1320(1516)
311 KOG1645 RING-finger-containing 98.6 6.2E-06 1.3E-10 76.6 17.3 244 211-460 191-461 (463)
312 KOG3621 WD40 repeat-containing 98.5 2.4E-05 5.3E-10 77.8 22.1 148 153-316 32-190 (726)
313 KOG2066 Vacuolar assembly/sort 98.5 8.6E-06 1.9E-10 82.0 18.6 176 307-501 49-233 (846)
314 KOG1920 IkappaB kinase complex 98.5 8E-05 1.7E-09 78.6 26.1 197 155-370 69-325 (1265)
315 KOG2066 Vacuolar assembly/sort 98.5 2.2E-05 4.8E-10 79.2 20.7 180 216-462 42-235 (846)
316 PRK02888 nitrous-oxide reducta 98.5 5.1E-05 1.1E-09 76.4 23.0 172 317-501 215-404 (635)
317 PF07433 DUF1513: Protein of u 98.5 0.00051 1.1E-08 63.4 27.7 237 157-451 7-277 (305)
318 PF07433 DUF1513: Protein of u 98.4 0.00014 3.1E-09 67.0 23.3 203 258-501 8-247 (305)
319 PRK11138 outer membrane biogen 98.4 8.1E-05 1.8E-09 73.9 23.9 258 225-500 69-352 (394)
320 KOG0882 Cyclophilin-related pe 98.4 1.7E-06 3.6E-11 81.3 10.8 202 295-501 8-231 (558)
321 KOG3617 WD40 and TPR repeat-co 98.4 2E-05 4.4E-10 79.7 18.9 106 160-284 21-131 (1416)
322 KOG4714 Nucleoporin [Nuclear s 98.4 1.7E-06 3.6E-11 75.7 9.5 163 329-500 81-253 (319)
323 PF00930 DPPIV_N: Dipeptidyl p 98.4 0.00069 1.5E-08 66.1 28.2 288 163-490 1-346 (353)
324 KOG2114 Vacuolar assembly/sort 98.4 0.00015 3.2E-09 74.0 23.1 212 220-469 30-252 (933)
325 cd00216 PQQ_DH Dehydrogenases 98.3 0.00037 8E-09 71.1 25.9 271 226-501 62-424 (488)
326 cd00216 PQQ_DH Dehydrogenases 98.3 0.0036 7.9E-08 63.8 32.0 295 166-487 61-453 (488)
327 KOG1645 RING-finger-containing 98.3 3.8E-05 8.2E-10 71.5 15.6 241 249-500 188-460 (463)
328 PRK02888 nitrous-oxide reducta 98.3 0.0006 1.3E-08 68.9 24.8 133 345-489 284-449 (635)
329 KOG2114 Vacuolar assembly/sort 98.2 0.00035 7.6E-09 71.4 21.1 189 148-341 58-260 (933)
330 COG0823 TolB Periplasmic compo 98.1 0.00054 1.2E-08 67.8 21.4 141 342-492 242-390 (425)
331 PF11768 DUF3312: Protein of u 98.1 3.7E-05 8E-10 75.5 12.1 72 428-500 257-328 (545)
332 COG0823 TolB Periplasmic compo 98.1 0.00015 3.3E-09 71.6 16.3 145 337-492 192-346 (425)
333 TIGR03075 PQQ_enz_alc_DH PQQ-d 98.0 0.023 5.1E-07 58.3 33.2 76 410-486 441-518 (527)
334 PF14583 Pectate_lyase22: Olig 98.0 0.015 3.2E-07 55.7 27.3 271 220-500 42-380 (386)
335 PF04053 Coatomer_WDAD: Coatom 98.0 0.0029 6.3E-08 62.9 23.6 214 254-500 32-261 (443)
336 PF04841 Vps16_N: Vps16, N-ter 98.0 0.022 4.8E-07 56.5 29.2 189 236-442 62-271 (410)
337 KOG4649 PQQ (pyrrolo-quinoline 97.9 0.0079 1.7E-07 53.3 22.3 207 266-492 23-240 (354)
338 PF04053 Coatomer_WDAD: Coatom 97.9 0.00028 6E-09 70.0 14.9 142 336-500 31-172 (443)
339 PF14655 RAB3GAP2_N: Rab3 GTPa 97.9 0.018 4E-07 56.3 26.9 90 338-427 308-407 (415)
340 KOG3621 WD40 repeat-containing 97.8 0.00048 1E-08 69.0 14.6 120 214-368 34-155 (726)
341 PF00780 CNH: CNH domain; Int 97.8 0.028 6.1E-07 52.7 26.5 226 224-472 6-267 (275)
342 KOG3617 WD40 and TPR repeat-co 97.8 0.00071 1.5E-08 69.0 15.6 259 218-498 20-330 (1416)
343 PF11768 DUF3312: Protein of u 97.8 0.00015 3.2E-09 71.3 10.3 76 211-287 257-332 (545)
344 PF06433 Me-amine-dh_H: Methyl 97.8 0.018 4E-07 54.0 23.4 253 217-472 39-332 (342)
345 PF04841 Vps16_N: Vps16, N-ter 97.8 0.026 5.7E-07 56.0 26.1 198 277-482 62-270 (410)
346 PF00930 DPPIV_N: Dipeptidyl p 97.8 0.024 5.1E-07 55.4 25.6 285 142-447 30-344 (353)
347 COG3391 Uncharacterized conser 97.8 0.049 1.1E-06 53.6 30.3 233 257-500 33-282 (381)
348 KOG4649 PQQ (pyrrolo-quinoline 97.8 0.025 5.5E-07 50.3 28.9 67 225-292 63-131 (354)
349 KOG1008 Uncharacterized conser 97.8 1.2E-05 2.5E-10 79.1 2.1 235 213-494 56-328 (783)
350 smart00320 WD40 WD40 repeats. 97.8 6.1E-05 1.3E-09 46.1 4.8 36 147-182 5-40 (40)
351 smart00320 WD40 WD40 repeats. 97.7 0.00012 2.7E-09 44.6 6.0 39 420-458 2-40 (40)
352 COG3386 Gluconolactonase [Carb 97.7 0.043 9.3E-07 51.8 24.7 219 262-492 32-276 (307)
353 KOG4640 Anaphase-promoting com 97.7 0.00025 5.4E-09 70.0 9.7 93 379-481 20-115 (665)
354 KOG4640 Anaphase-promoting com 97.6 0.00019 4.2E-09 70.8 8.5 70 431-501 21-92 (665)
355 PF03178 CPSF_A: CPSF A subuni 97.6 0.032 6.9E-07 53.7 22.9 208 277-498 3-262 (321)
356 PF06433 Me-amine-dh_H: Methyl 97.5 0.083 1.8E-06 49.8 24.2 252 236-501 18-320 (342)
357 PF08596 Lgl_C: Lethal giant l 97.5 0.046 1E-06 53.7 22.9 269 215-492 3-327 (395)
358 PF08596 Lgl_C: Lethal giant l 97.5 0.024 5.3E-07 55.6 20.9 220 156-376 3-299 (395)
359 PRK13616 lipoprotein LpqB; Pro 97.5 0.0058 1.3E-07 63.2 17.3 179 316-500 328-524 (591)
360 TIGR03075 PQQ_enz_alc_DH PQQ-d 97.5 0.12 2.7E-06 53.1 26.8 230 266-501 120-490 (527)
361 PF14783 BBS2_Mid: Ciliary BBS 97.4 0.025 5.5E-07 43.8 15.8 91 401-497 16-110 (111)
362 PF08553 VID27: VID27 cytoplas 97.4 0.0043 9.2E-08 65.2 15.4 135 314-459 501-646 (794)
363 COG3386 Gluconolactonase [Carb 97.4 0.12 2.6E-06 48.9 24.5 213 221-446 32-271 (307)
364 PF08553 VID27: VID27 cytoplas 97.4 0.0074 1.6E-07 63.5 16.9 138 356-500 501-646 (794)
365 PF06977 SdiA-regulated: SdiA- 97.4 0.1 2.2E-06 47.6 25.6 198 249-457 16-247 (248)
366 KOG1008 Uncharacterized conser 97.4 4.8E-05 1E-09 75.0 0.7 182 308-501 71-275 (783)
367 KOG2395 Protein involved in va 97.4 0.0049 1.1E-07 60.0 14.1 140 307-459 346-499 (644)
368 COG3391 Uncharacterized conser 97.3 0.19 4E-06 49.6 30.3 218 258-483 77-310 (381)
369 PF14783 BBS2_Mid: Ciliary BBS 97.3 0.025 5.4E-07 43.8 14.1 100 157-279 2-109 (111)
370 PF02897 Peptidase_S9_N: Proly 97.2 0.26 5.7E-06 49.3 32.3 242 155-422 124-408 (414)
371 KOG2444 WD40 repeat protein [G 97.2 0.0014 3.1E-08 57.0 7.7 106 349-461 70-178 (238)
372 PF06977 SdiA-regulated: SdiA- 97.2 0.063 1.4E-06 49.0 18.8 195 149-362 16-245 (248)
373 KOG1897 Damage-specific DNA bi 97.2 0.42 9.1E-06 50.7 32.1 322 154-502 530-899 (1096)
374 KOG2079 Vacuolar assembly/sort 97.2 0.02 4.3E-07 60.6 16.8 76 225-300 99-176 (1206)
375 KOG2395 Protein involved in va 97.1 0.018 3.8E-07 56.3 14.0 143 352-500 349-499 (644)
376 PF14655 RAB3GAP2_N: Rab3 GTPa 96.9 0.12 2.7E-06 50.6 18.8 46 426-471 303-348 (415)
377 PF02897 Peptidase_S9_N: Proly 96.9 0.6 1.3E-05 46.7 28.2 231 258-500 127-403 (414)
378 PF00780 CNH: CNH domain; Int 96.8 0.43 9.2E-06 44.7 26.6 225 165-429 6-266 (275)
379 PF10647 Gmad1: Lipoprotein Lp 96.7 0.22 4.7E-06 46.0 18.2 144 339-494 25-188 (253)
380 KOG4441 Proteins containing BT 96.7 0.38 8.3E-06 50.0 21.3 222 224-461 284-547 (571)
381 PHA02713 hypothetical protein; 96.6 0.33 7.2E-06 50.4 20.8 184 265-463 303-536 (557)
382 KOG2079 Vacuolar assembly/sort 96.6 0.0072 1.6E-07 63.7 8.4 93 402-494 101-198 (1206)
383 PRK13616 lipoprotein LpqB; Pro 96.6 0.23 5E-06 51.6 19.3 182 155-360 350-561 (591)
384 PF15390 DUF4613: Domain of un 96.5 0.18 3.9E-06 50.4 16.6 148 338-499 20-184 (671)
385 PF12894 Apc4_WD40: Anaphase-p 96.5 0.0099 2.2E-07 38.4 5.4 34 430-464 11-44 (47)
386 PF03178 CPSF_A: CPSF A subuni 96.4 1 2.2E-05 43.2 25.0 139 225-367 42-202 (321)
387 PHA02713 hypothetical protein; 96.4 0.35 7.5E-06 50.3 18.9 208 277-501 273-533 (557)
388 PF14870 PSII_BNR: Photosynthe 96.3 1 2.2E-05 42.5 29.8 268 213-498 16-301 (302)
389 PF05096 Glu_cyclase_2: Glutam 96.3 0.85 1.8E-05 41.6 23.1 179 257-448 47-249 (264)
390 TIGR03074 PQQ_membr_DH membran 96.3 1.4 3.1E-05 47.2 23.1 202 266-468 194-485 (764)
391 TIGR02604 Piru_Ver_Nterm putat 96.3 0.31 6.6E-06 47.9 17.1 143 339-492 15-204 (367)
392 KOG1916 Nuclear protein, conta 96.2 0.002 4.3E-08 66.4 1.3 124 148-283 126-264 (1283)
393 PF12894 Apc4_WD40: Anaphase-p 96.2 0.023 5E-07 36.7 5.7 30 154-183 11-40 (47)
394 PF12234 Rav1p_C: RAVE protein 95.9 0.26 5.6E-06 50.9 15.0 92 406-499 47-154 (631)
395 PRK13684 Ycf48-like protein; P 95.8 1.9 4.2E-05 41.6 30.5 148 337-498 172-328 (334)
396 KOG4441 Proteins containing BT 95.8 0.99 2.2E-05 46.9 19.0 182 266-463 285-502 (571)
397 PF05096 Glu_cyclase_2: Glutam 95.5 2 4.4E-05 39.2 22.4 179 157-355 47-249 (264)
398 KOG2444 WD40 repeat protein [G 95.4 0.06 1.3E-06 47.1 6.9 102 266-367 70-177 (238)
399 KOG1916 Nuclear protein, conta 95.3 0.012 2.6E-07 61.0 2.7 113 345-460 243-374 (1283)
400 PF05694 SBP56: 56kDa selenium 94.9 4.2 9.2E-05 39.9 23.2 238 224-489 86-391 (461)
401 PHA03098 kelch-like protein; P 94.7 1.9 4.1E-05 44.8 17.4 93 277-371 312-418 (534)
402 PF14870 PSII_BNR: Photosynthe 94.7 4 8.6E-05 38.5 27.6 109 377-496 142-256 (302)
403 PF10647 Gmad1: Lipoprotein Lp 94.5 2.5 5.5E-05 38.9 15.9 108 381-500 25-143 (253)
404 PF10168 Nup88: Nuclear pore c 94.4 8.6 0.00019 41.1 22.3 92 255-368 85-180 (717)
405 PF10313 DUF2415: Uncharacteri 94.4 0.17 3.6E-06 31.7 5.1 31 431-461 1-34 (43)
406 PF07995 GSDH: Glucose / Sorbo 94.2 5.6 0.00012 38.4 27.5 72 424-496 247-330 (331)
407 COG3204 Uncharacterized protei 94.2 2 4.4E-05 39.5 13.7 115 377-501 83-210 (316)
408 PF07995 GSDH: Glucose / Sorbo 94.1 5.8 0.00013 38.2 26.6 54 402-455 273-330 (331)
409 KOG2280 Vacuolar assembly/sort 94.1 6.4 0.00014 41.0 18.4 52 233-285 62-113 (829)
410 COG3490 Uncharacterized protei 93.9 5 0.00011 36.8 17.1 142 342-491 72-245 (366)
411 PF05694 SBP56: 56kDa selenium 93.9 7 0.00015 38.4 17.9 195 165-368 86-343 (461)
412 KOG3630 Nuclear pore complex, 93.9 1.2 2.7E-05 48.1 13.4 141 339-489 102-261 (1405)
413 COG3490 Uncharacterized protei 93.9 5.2 0.00011 36.7 20.8 54 220-273 120-180 (366)
414 KOG4499 Ca2+-binding protein R 93.7 4.7 0.0001 35.8 18.5 98 338-440 158-263 (310)
415 TIGR03074 PQQ_membr_DH membran 93.6 13 0.00027 40.3 22.9 151 349-501 260-477 (764)
416 TIGR02604 Piru_Ver_Nterm putat 93.4 5.5 0.00012 39.0 16.7 102 339-451 73-204 (367)
417 PF14583 Pectate_lyase22: Olig 93.3 8.3 0.00018 37.4 29.7 105 344-459 244-380 (386)
418 PF07569 Hira: TUP1-like enhan 93.3 0.58 1.3E-05 42.0 8.9 64 438-502 18-96 (219)
419 KOG2377 Uncharacterized conser 93.2 7.9 0.00017 38.0 16.3 126 329-465 58-190 (657)
420 PHA02790 Kelch-like protein; P 93.2 7.2 0.00016 39.8 17.7 103 267-371 273-388 (480)
421 PHA03098 kelch-like protein; P 93.0 5.7 0.00012 41.2 17.2 144 224-371 294-468 (534)
422 KOG1897 Damage-specific DNA bi 93.0 16 0.00034 39.6 32.0 312 156-498 585-939 (1096)
423 KOG3630 Nuclear pore complex, 92.9 0.55 1.2E-05 50.6 9.1 152 155-313 101-260 (1405)
424 KOG4499 Ca2+-binding protein R 92.8 6.7 0.00014 34.9 21.0 135 338-482 109-264 (310)
425 PF10313 DUF2415: Uncharacteri 92.8 0.39 8.4E-06 30.1 4.8 30 472-501 1-33 (43)
426 PF15390 DUF4613: Domain of un 92.5 5.6 0.00012 40.3 14.9 147 214-367 20-186 (671)
427 PF14781 BBS2_N: Ciliary BBSom 92.4 5 0.00011 32.4 13.0 120 343-469 4-134 (136)
428 PF12234 Rav1p_C: RAVE protein 92.3 4.7 0.0001 42.0 14.6 109 342-459 34-155 (631)
429 COG5167 VID27 Protein involved 91.9 2.5 5.5E-05 41.8 11.5 148 348-501 478-632 (776)
430 COG5167 VID27 Protein involved 91.7 2.4 5.1E-05 42.0 11.1 139 309-459 482-631 (776)
431 PF10168 Nup88: Nuclear pore c 91.6 22 0.00048 38.1 20.0 88 155-243 85-179 (717)
432 PF08728 CRT10: CRT10; InterP 91.6 10 0.00022 40.1 16.2 99 401-500 115-245 (717)
433 PF12657 TFIIIC_delta: Transcr 91.4 1.1 2.3E-05 38.6 7.9 27 473-499 87-119 (173)
434 PRK10115 protease 2; Provision 91.1 24 0.00053 37.8 33.9 192 155-366 127-343 (686)
435 COG3823 Glutamine cyclotransfe 91.1 8.4 0.00018 33.7 12.5 172 165-355 55-247 (262)
436 KOG4460 Nuclear pore complex, 90.8 4.2 9E-05 40.5 11.8 96 255-371 104-202 (741)
437 KOG2377 Uncharacterized conser 90.7 6.3 0.00014 38.6 12.7 132 223-355 31-171 (657)
438 TIGR02276 beta_rpt_yvtn 40-res 90.4 1.7 3.7E-05 26.8 6.3 40 440-479 1-41 (42)
439 KOG4460 Nuclear pore complex, 90.0 16 0.00035 36.6 14.9 26 339-364 105-130 (741)
440 PF08728 CRT10: CRT10; InterP 89.7 14 0.0003 39.0 15.3 67 216-282 103-193 (717)
441 KOG2247 WD40 repeat-containing 89.6 0.06 1.3E-06 52.3 -1.5 132 258-391 38-171 (615)
442 TIGR03118 PEPCTERM_chp_1 conse 89.4 18 0.0004 33.7 24.9 223 214-440 23-307 (336)
443 PF14727 PHTB1_N: PTHB1 N-term 89.3 24 0.00053 35.0 31.9 142 224-366 36-203 (418)
444 COG3204 Uncharacterized protei 89.2 19 0.0004 33.5 21.4 117 251-367 82-210 (316)
445 PHA02790 Kelch-like protein; P 89.1 29 0.00062 35.5 17.6 141 224-371 271-427 (480)
446 PF12657 TFIIIC_delta: Transcr 88.8 3.7 8E-05 35.3 9.1 36 381-419 87-122 (173)
447 KOG3616 Selective LIM binding 88.7 34 0.00074 35.9 18.1 69 157-245 17-85 (1636)
448 TIGR03118 PEPCTERM_chp_1 conse 88.5 21 0.00046 33.3 26.6 226 157-389 25-307 (336)
449 KOG2280 Vacuolar assembly/sort 88.0 36 0.00078 35.9 16.4 185 275-468 63-254 (829)
450 PF07676 PD40: WD40-like Beta 87.6 2 4.3E-05 26.2 5.0 28 471-498 8-38 (39)
451 PF14269 Arylsulfotran_2: Aryl 87.1 7.6 0.00016 36.8 10.8 91 409-499 95-218 (299)
452 PF07569 Hira: TUP1-like enhan 86.8 6.9 0.00015 35.1 9.9 70 221-291 18-102 (219)
453 COG5290 IkappaB kinase complex 86.8 12 0.00025 39.4 12.2 59 218-276 206-268 (1243)
454 PF07676 PD40: WD40-like Beta 86.7 3.7 8E-05 25.0 5.8 31 427-457 5-38 (39)
455 KOG1898 Splicing factor 3b, su 85.9 60 0.0013 35.7 22.9 31 154-184 582-618 (1205)
456 PF05935 Arylsulfotrans: Aryls 85.2 47 0.001 33.9 18.9 116 343-471 153-312 (477)
457 PRK13684 Ycf48-like protein; P 84.8 39 0.00084 32.6 28.8 150 296-458 172-329 (334)
458 COG3823 Glutamine cyclotransfe 84.6 27 0.00059 30.7 14.0 172 265-449 55-248 (262)
459 PRK10115 protease 2; Provision 84.4 63 0.0014 34.7 33.2 235 215-463 128-397 (686)
460 PF11715 Nup160: Nucleoporin N 83.6 5.8 0.00013 41.3 9.1 72 223-294 156-258 (547)
461 KOG1983 Tomosyn and related SN 83.4 53 0.0012 36.8 16.5 30 215-244 37-66 (993)
462 TIGR03606 non_repeat_PQQ dehyd 83.3 54 0.0012 33.0 20.5 112 337-451 29-166 (454)
463 PF03088 Str_synth: Strictosid 83.0 11 0.00024 28.2 7.8 43 448-490 33-75 (89)
464 PF07250 Glyoxal_oxid_N: Glyox 82.5 22 0.00047 32.4 11.0 123 343-469 72-206 (243)
465 PF13449 Phytase-like: Esteras 81.5 52 0.0011 31.6 19.8 144 338-491 20-234 (326)
466 COG4257 Vgb Streptogramin lyas 81.2 45 0.00098 30.7 13.7 138 343-499 67-216 (353)
467 PF03022 MRJP: Major royal jel 80.8 51 0.0011 31.0 20.0 163 277-449 35-254 (287)
468 TIGR02276 beta_rpt_yvtn 40-res 80.7 10 0.00023 23.1 6.4 38 400-438 4-41 (42)
469 PF14761 HPS3_N: Hermansky-Pud 80.6 6.8 0.00015 34.6 6.8 59 443-501 29-96 (215)
470 COG4590 ABC-type uncharacteriz 79.0 16 0.00034 35.9 9.2 156 213-371 220-390 (733)
471 PF11715 Nup160: Nucleoporin N 78.4 9.1 0.0002 39.9 8.4 37 432-468 216-256 (547)
472 COG5290 IkappaB kinase complex 78.2 72 0.0016 34.0 13.9 31 252-282 110-140 (1243)
473 PF10214 Rrn6: RNA polymerase 77.6 1.2E+02 0.0025 33.3 21.4 28 339-366 147-175 (765)
474 COG1520 FOG: WD40-like repeat 76.5 79 0.0017 30.9 22.0 195 268-470 70-278 (370)
475 KOG1900 Nuclear pore complex, 75.6 49 0.0011 37.3 12.7 143 355-501 95-272 (1311)
476 COG1506 DAP2 Dipeptidyl aminop 75.4 93 0.002 33.1 14.9 159 317-492 43-236 (620)
477 PF14727 PHTB1_N: PTHB1 N-term 74.7 95 0.0021 31.0 29.7 58 402-461 302-361 (418)
478 smart00564 PQQ beta-propeller 74.5 7.6 0.00017 22.3 3.9 25 444-468 8-32 (33)
479 KOG2247 WD40 repeat-containing 74.0 0.27 5.9E-06 48.0 -3.8 140 340-492 37-179 (615)
480 PLN00033 photosystem II stabil 74.0 97 0.0021 30.7 32.3 145 340-498 241-396 (398)
481 PF05935 Arylsulfotrans: Aryls 73.9 1.1E+02 0.0024 31.3 20.7 67 224-293 114-183 (477)
482 PF12768 Rax2: Cortical protei 73.4 44 0.00095 31.3 10.5 85 410-494 16-114 (281)
483 PF01436 NHL: NHL repeat; Int 73.1 8.8 0.00019 21.4 3.7 25 474-498 4-28 (28)
484 PF08801 Nucleoporin_N: Nup133 72.3 1E+02 0.0022 30.8 13.9 29 473-501 191-219 (422)
485 KOG1983 Tomosyn and related SN 71.9 1.8E+02 0.0039 32.9 21.2 28 156-183 37-64 (993)
486 PF02333 Phytase: Phytase; In 71.2 1.1E+02 0.0023 30.0 20.1 188 164-368 66-291 (381)
487 KOG3616 Selective LIM binding 71.2 8.7 0.00019 40.0 5.6 66 215-282 16-81 (1636)
488 PRK13613 lipoprotein LpqB; Pro 70.2 1.5E+02 0.0032 31.3 18.1 160 329-499 353-535 (599)
489 PF01011 PQQ: PQQ enzyme repea 68.5 12 0.00026 22.7 3.9 27 445-471 3-29 (38)
490 smart00564 PQQ beta-propeller 66.7 15 0.00032 21.0 4.0 25 402-426 8-32 (33)
491 PF01731 Arylesterase: Arylest 66.6 38 0.00082 25.2 6.9 49 410-461 36-85 (86)
492 PF12768 Rax2: Cortical protei 65.9 1.2E+02 0.0026 28.5 13.3 132 275-407 15-169 (281)
493 PF14779 BBS1: Ciliary BBSome 65.1 1.1E+02 0.0025 28.0 18.8 67 431-498 177-255 (257)
494 KOG1900 Nuclear pore complex, 64.9 89 0.0019 35.3 11.9 138 314-461 96-273 (1311)
495 PF07250 Glyoxal_oxid_N: Glyox 64.2 20 0.00044 32.6 6.1 81 412-492 48-138 (243)
496 PF12341 DUF3639: Protein of u 63.7 20 0.00043 20.0 3.6 25 432-458 3-27 (27)
497 COG1520 FOG: WD40-like repeat 62.3 1.6E+02 0.0035 28.8 28.9 159 265-429 111-279 (370)
498 PF01011 PQQ: PQQ enzyme repea 61.7 23 0.00049 21.4 4.2 26 403-428 3-28 (38)
499 PF01731 Arylesterase: Arylest 60.9 56 0.0012 24.3 6.9 48 452-501 36-84 (86)
500 PF14781 BBS2_N: Ciliary BBSom 60.7 91 0.002 25.4 13.9 117 159-286 3-127 (136)
No 1
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=9.2e-67 Score=476.58 Aligned_cols=356 Identities=65% Similarity=1.120 Sum_probs=331.1
Q ss_pred cccCCCceeeccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeee---cccccCCCC
Q 010759 140 FEIPNSDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK---GRTNEKSKD 215 (502)
Q Consensus 140 ~~~~~~~~~~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 215 (502)
..||+..+.+++ |..+|++++|+|-.. +|++|+.|.+.++|++........ ....+++.. +......+.
T Consensus 165 ~~I~~~~~kvl~-~~~~V~~~~WnP~~~~llasg~~~s~ari~~l~e~~~~~~------~q~~lrh~~~~~~~s~~~nkd 237 (524)
T KOG0273|consen 165 VEIPSSKAKVLR-HESEVFICAWNPLRDGLLASGSGDSTARIWNLLENSNIGS------TQLVLRHCIREGGKSVPSNKD 237 (524)
T ss_pred ccccccceeecc-CCCceEEEecCchhhhhhhccCCccceeeeeehhhccccc------hhhhhhhhhhhhcccCCccCC
Confidence 358888888888 999999999999765 999999999999999874211111 111223322 233445688
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
|++++|+.+|.+|++|+.||.++||+..+.+..++..|++||++|+|+..|+||++++.|+++.+||..++++.+++.+|
T Consensus 238 VT~L~Wn~~G~~LatG~~~G~~riw~~~G~l~~tl~~HkgPI~slKWnk~G~yilS~~vD~ttilwd~~~g~~~q~f~~~ 317 (524)
T KOG0273|consen 238 VTSLDWNNDGTLLATGSEDGEARIWNKDGNLISTLGQHKGPIFSLKWNKKGTYILSGGVDGTTILWDAHTGTVKQQFEFH 317 (524)
T ss_pred cceEEecCCCCeEEEeecCcEEEEEecCchhhhhhhccCCceEEEEEcCCCCEEEeccCCccEEEEeccCceEEEeeeec
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
..+..+++|.++..|++++.|+.|+||.+....|+.+|.||.++|+++.|.|.|.+|+|||+|++++||.+......+.|
T Consensus 318 s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~~~l 397 (524)
T KOG0273|consen 318 SAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSVHDL 397 (524)
T ss_pred cCCccceEEecCceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcchhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
++|...|+++.|+|.|....+|+....+++++.|++|++||+..+.++++|..|..+|++|+|||+|+|||+|+.||.|+
T Consensus 398 ~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs~dg~V~ 477 (524)
T KOG0273|consen 398 QAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGSLDGCVH 477 (524)
T ss_pred hhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecCCCCeeE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010759 456 IWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
||+.+++++++.+.+.+.|+.++|+.+|++|.+|..++.++|.|||+
T Consensus 478 iws~~~~~l~~s~~~~~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr~ 524 (524)
T KOG0273|consen 478 IWSTKTGKLVKSYQGTGGIFELCWNAAGDKLGACASDGSVCVLDLRK 524 (524)
T ss_pred eccccchheeEeecCCCeEEEEEEcCCCCEEEEEecCCCceEEEecC
Confidence 99999999999999999999999999999999999999999999996
No 2
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=2.6e-58 Score=410.81 Aligned_cols=327 Identities=30% Similarity=0.525 Sum_probs=297.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...+.||..+|-|++|+|+|+.|+|||.|.++|+||+.+.... ..++ +|...|.|++|+|||+
T Consensus 108 ssS~~GH~e~Vl~~~fsp~g~~l~tGsGD~TvR~WD~~TeTp~-------------~t~K----gH~~WVlcvawsPDgk 170 (480)
T KOG0271|consen 108 SSSIAGHGEAVLSVQFSPTGSRLVTGSGDTTVRLWDLDTETPL-------------FTCK----GHKNWVLCVAWSPDGK 170 (480)
T ss_pred ccccCCCCCcEEEEEecCCCceEEecCCCceEEeeccCCCCcc-------------eeec----CCccEEEEEEECCCcc
Confidence 3467899999999999999999999999999999999875421 2233 3567899999999999
Q ss_pred EEEEEECCCcEEEEECC--CceeEeecCCCCCEEEEEecC-----CCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 227 LLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK-----KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~-----~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
.|++|+.||.|++||.. +.....+.+|+..|++|+|.| ...+|+++|.||+|+|||+..+.++..+.+|..+|
T Consensus 171 ~iASG~~dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~V 250 (480)
T KOG0271|consen 171 KIASGSKDGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASV 250 (480)
T ss_pred hhhccccCCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccce
Confidence 99999999999999954 345568999999999999976 45689999999999999999999999999999999
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEc-----------CCCC------------------
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-----------PTGS------------------ 350 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-----------p~~~------------------ 350 (502)
.++.|-....+.+++.|++|++|+...++.+..+.||...|+.++.+ |.++
T Consensus 251 TCvrwGG~gliySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~ 330 (480)
T KOG0271|consen 251 TCVRWGGEGLIYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEA 330 (480)
T ss_pred EEEEEcCCceEEecCCCceEEEEEccchhHHHhhcccchheeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999988876 3344
Q ss_pred -------EEEEEeCCCcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010759 351 -------LLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 422 (502)
Q Consensus 351 -------~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 422 (502)
.+++|++|+++.+|+.. ..+++..+.+|...|..+.|||++. ++|++|.|..|++||.++|+.
T Consensus 331 ~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lVn~V~fSPd~r---------~IASaSFDkSVkLW~g~tGk~ 401 (480)
T KOG0271|consen 331 VLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALVNHVSFSPDGR---------YIASASFDKSVKLWDGRTGKF 401 (480)
T ss_pred hhccCcceeEEecCCceEEEecccccccchhhhhchhhheeeEEECCCcc---------EEEEeecccceeeeeCCCcch
Confidence 39999999999999865 4457888999999999999999997 899999999999999999999
Q ss_pred EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 423 LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 423 ~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+.+|+||-++|+.++||.|.++|++||.|.++++|++++.++..-++++. .|+++.|+|||.++|+|..|..+++|-
T Consensus 402 lasfRGHv~~VYqvawsaDsRLlVS~SkDsTLKvw~V~tkKl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 402 LASFRGHVAAVYQVAWSADSRLLVSGSKDSTLKVWDVRTKKLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred hhhhhhccceeEEEEeccCccEEEEcCCCceEEEEEeeeeeecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999999999999999999999999999999999998888765 599999999999999999999999883
No 3
>KOG0271 consensus Notchless-like WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-50 Score=361.77 Aligned_cols=288 Identities=32% Similarity=0.578 Sum_probs=257.8
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 223 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~- 223 (502)
.+.++.+||...|.|++|||||+.||||+.||+|++||..++...+. ...+|.+.|++++|.|
T Consensus 148 Tp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~~g~----------------~l~gH~K~It~Lawep~ 211 (480)
T KOG0271|consen 148 TPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQIGR----------------ALRGHKKWITALAWEPL 211 (480)
T ss_pred CcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCcccc----------------cccCcccceeEEeeccc
Confidence 45678999999999999999999999999999999999887765432 2235688999999975
Q ss_pred ----CCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 224 ----EGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 224 ----~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
..++|++++.||.|+|||+.. .+...+.+|+.+|+|++|--+| +|++||.|++|++|+...+.+.+++.+|..-
T Consensus 212 hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~g-liySgS~DrtIkvw~a~dG~~~r~lkGHahw 290 (480)
T KOG0271|consen 212 HLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEG-LIYSGSQDRTIKVWRALDGKLCRELKGHAHW 290 (480)
T ss_pred ccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCc-eEEecCCCceEEEEEccchhHHHhhcccchh
Confidence 678999999999999999875 5667889999999999997654 8999999999999999999888888888766
Q ss_pred eEEEecC-------------CC------------------------ceEEEEcCCCeEEEEEcCC-CcceeeecCCCcce
Q 010759 299 TLDVDWR-------------NN------------------------VSFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEV 340 (502)
Q Consensus 299 ~~~~~~~-------------~~------------------------~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h~~~v 340 (502)
++.+... .. .+++++++|.++++|+-.. .+|+..+.||...|
T Consensus 291 vN~lalsTdy~LRtgaf~~t~~~~~~~se~~~~Al~rY~~~~~~~~erlVSgsDd~tlflW~p~~~kkpi~rmtgHq~lV 370 (480)
T KOG0271|consen 291 VNHLALSTDYVLRTGAFDHTGRKPKSFSEEQKKALERYEAVLKDSGERLVSGSDDFTLFLWNPFKSKKPITRMTGHQALV 370 (480)
T ss_pred eeeeeccchhhhhccccccccccCCChHHHHHHHHHHHHHhhccCcceeEEecCCceEEEecccccccchhhhhchhhhe
Confidence 6555432 11 2589999999999998754 45888899999999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC
Q 010759 341 NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG 420 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 420 (502)
+.+.||||+++||++|.|..|++|+.++++++.+|++|-..|+.++|+.+.. +|++||.|.++++|++++.
T Consensus 371 n~V~fSPd~r~IASaSFDkSVkLW~g~tGk~lasfRGHv~~VYqvawsaDsR---------LlVS~SkDsTLKvw~V~tk 441 (480)
T KOG0271|consen 371 NHVSFSPDGRYIASASFDKSVKLWDGRTGKFLASFRGHVAAVYQVAWSADSR---------LLVSGSKDSTLKVWDVRTK 441 (480)
T ss_pred eeEEECCCccEEEEeecccceeeeeCCCcchhhhhhhccceeEEEEeccCcc---------EEEEcCCCceEEEEEeeee
Confidence 9999999999999999999999999999999999999999999999999986 8999999999999999999
Q ss_pred eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 421 KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 421 ~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
++.+.+.||.+.|.++.|+|||+.+++|+.|..+++|.
T Consensus 442 Kl~~DLpGh~DEVf~vDwspDG~rV~sggkdkv~~lw~ 479 (480)
T KOG0271|consen 442 KLKQDLPGHADEVFAVDWSPDGQRVASGGKDKVLRLWR 479 (480)
T ss_pred eecccCCCCCceEEEEEecCCCceeecCCCceEEEeec
Confidence 99999999999999999999999999999999999994
No 4
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=1.2e-49 Score=359.95 Aligned_cols=282 Identities=26% Similarity=0.489 Sum_probs=257.4
Q ss_pred cccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC--CCEE
Q 010759 151 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE--GTLL 228 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~--~~~l 228 (502)
-|-+.+|..|.||+|+..|||||.+|.+++|+..+.. .+..+. +|...|.++.|+|. +.-+
T Consensus 172 ~gd~rPis~~~fS~ds~~laT~swsG~~kvW~~~~~~-------------~~~~l~----gH~~~v~~~~fhP~~~~~~l 234 (459)
T KOG0272|consen 172 VGDTRPISGCSFSRDSKHLATGSWSGLVKVWSVPQCN-------------LLQTLR----GHTSRVGAAVFHPVDSDLNL 234 (459)
T ss_pred ccCCCcceeeEeecCCCeEEEeecCCceeEeecCCcc-------------eeEEEe----ccccceeeEEEccCCCccce
Confidence 3567899999999999999999999999999986542 112233 45788999999997 6789
Q ss_pred EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC
Q 010759 229 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 307 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
+||+.||++++|++++ ..+..+.+|...|..++|||+|++|+|+|.|.+.++||++++..
T Consensus 235 at~s~Dgtvklw~~~~e~~l~~l~gH~~RVs~VafHPsG~~L~TasfD~tWRlWD~~tk~E------------------- 295 (459)
T KOG0272|consen 235 ATASADGTVKLWKLSQETPLQDLEGHLARVSRVAFHPSGKFLGTASFDSTWRLWDLETKSE------------------- 295 (459)
T ss_pred eeeccCCceeeeccCCCcchhhhhcchhhheeeeecCCCceeeecccccchhhcccccchh-------------------
Confidence 9999999999999987 56778999999999999999999999999999999999988642
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 387 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 387 (502)
+....||...|.+++|+|||.+++||+.|..-||||+++++++..+.+|..+|+++.|
T Consensus 296 ----------------------lL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~im~L~gH~k~I~~V~f 353 (459)
T KOG0272|consen 296 ----------------------LLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRCIMFLAGHIKEILSVAF 353 (459)
T ss_pred ----------------------hHhhcccccccceeEecCCCceeeccCccchhheeecccCcEEEEecccccceeeEeE
Confidence 2235689999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
+|+|. .|||||.|++++|||++..+.++++.+|..-|+.|.|+| .|.+|+|+|.|++++||...++.+++
T Consensus 354 sPNGy---------~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~k 424 (459)
T KOG0272|consen 354 SPNGY---------HLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLK 424 (459)
T ss_pred CCCce---------EEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCcceeeecCCCcccch
Confidence 99995 799999999999999999999999999999999999999 68999999999999999999999999
Q ss_pred EEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 467 TYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 467 ~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
++.|+ +.|++++.+|+|..+++++.|+++++|.
T Consensus 425 sLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 425 SLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99886 4699999999999999999999999995
No 5
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=8.9e-45 Score=313.85 Aligned_cols=285 Identities=26% Similarity=0.455 Sum_probs=256.5
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..+|+||...|.++.|++|.++|+|+|.||.+.|||..+.... . ...-.+..|..++|+|.|+
T Consensus 48 rr~LkGH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~----------h-------aipl~s~WVMtCA~sPSg~ 110 (343)
T KOG0286|consen 48 RRTLKGHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKV----------H-------AIPLPSSWVMTCAYSPSGN 110 (343)
T ss_pred EEEecccccceeeeEecCCcCeEEeeccCCeEEEEEcccccce----------e-------EEecCceeEEEEEECCCCC
Confidence 3789999999999999999999999999999999997664211 0 0112356799999999999
Q ss_pred EEEEEECCCcEEEEECCC-------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 227 LLATGSYDGQARIWSTNG-------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
++++|+.|+...||++.. .....+.+|++.+.++.|-++ ..|+|+|.|.++.+||+++++....|..|.+.|
T Consensus 111 ~VAcGGLdN~Csiy~ls~~d~~g~~~v~r~l~gHtgylScC~f~dD-~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV 189 (343)
T KOG0286|consen 111 FVACGGLDNKCSIYPLSTRDAEGNVRVSRELAGHTGYLSCCRFLDD-NHILTGSGDMTCALWDIETGQQTQVFHGHTGDV 189 (343)
T ss_pred eEEecCcCceeEEEecccccccccceeeeeecCccceeEEEEEcCC-CceEecCCCceEEEEEcccceEEEEecCCcccE
Confidence 999999999999999753 234568999999999999984 579999999999999999999999999999999
Q ss_pred EEEecCC--CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 300 LDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 300 ~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
.+++..+ ...|++++.|++.++||++.+..++.|.||.+.|++|+|+|+|.-|++|++|++.|+||++..+.+..+..
T Consensus 190 ~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~ 269 (343)
T KOG0286|consen 190 MSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSH 269 (343)
T ss_pred EEEecCCCCCCeEEecccccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecCCcEEeeecc
Confidence 9998754 57899999999999999999999999999999999999999999999999999999999999887766643
Q ss_pred --CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 378 --HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 378 --~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
...+|++++||..|+ +|++|..|.++.+||.-.++.+..+.+|...|++|..+|||..|+|||+|.+|+
T Consensus 270 ~~~~~gitSv~FS~SGR---------lLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lr 340 (343)
T KOG0286|consen 270 DSIICGITSVAFSKSGR---------LLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLR 340 (343)
T ss_pred CcccCCceeEEEccccc---------EEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHhee
Confidence 346789999999997 788899999999999999999999999999999999999999999999999999
Q ss_pred EEe
Q 010759 456 IWS 458 (502)
Q Consensus 456 iw~ 458 (502)
||.
T Consensus 341 iW~ 343 (343)
T KOG0286|consen 341 IWA 343 (343)
T ss_pred ecC
Confidence 994
No 6
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=6.4e-44 Score=306.79 Aligned_cols=291 Identities=27% Similarity=0.463 Sum_probs=247.0
Q ss_pred eeccccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
-+|++|++.|++++..+. ...|++++.|.++.+|++....... | ...+. ..+|+.-|..++.++||+
T Consensus 9 ~tl~gh~d~Vt~la~~~~~~~~l~sasrDk~ii~W~L~~dd~~~----G----~~~r~----~~GHsH~v~dv~~s~dg~ 76 (315)
T KOG0279|consen 9 GTLEGHTDWVTALAIKIKNSDILVSASRDKTIIVWKLTSDDIKY----G----VPVRR----LTGHSHFVSDVVLSSDGN 76 (315)
T ss_pred eeecCCCceEEEEEeecCCCceEEEcccceEEEEEEeccCcccc----C----ceeee----eeccceEecceEEccCCc
Confidence 478999999999999997 5689999999999999987542110 0 11222 334677899999999999
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
++++++.|+++++||+.+ .....|.+|+..|.+++|+++..+++|||.|++|++||+...... ++
T Consensus 77 ~alS~swD~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTiklwnt~g~ck~-t~------------- 142 (315)
T KOG0279|consen 77 FALSASWDGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIKLWNTLGVCKY-TI------------- 142 (315)
T ss_pred eEEeccccceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceeeeeeecccEEE-EE-------------
Confidence 999999999999999875 667789999999999999999999999999999999997543211 00
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
.-.++.+.|+|++|+|+ ..+|+++|.|+++++||+++-+..+.+.+|.+.++
T Consensus 143 --------------------------~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~~~~~gh~~~v~ 196 (315)
T KOG0279|consen 143 --------------------------HEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLRTTFIGHSGYVN 196 (315)
T ss_pred --------------------------ecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchhhccccccccEE
Confidence 00123678999999998 78999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
.+.+||+|+ +.++|+.||.+.+||++.++.++.+. |...|++++|+|+..+|+.+... .|+|||+.++.
T Consensus 197 t~~vSpDGs---------lcasGgkdg~~~LwdL~~~k~lysl~-a~~~v~sl~fspnrywL~~at~~-sIkIwdl~~~~ 265 (315)
T KOG0279|consen 197 TVTVSPDGS---------LCASGGKDGEAMLWDLNEGKNLYSLE-AFDIVNSLCFSPNRYWLCAATAT-SIKIWDLESKA 265 (315)
T ss_pred EEEECCCCC---------EEecCCCCceEEEEEccCCceeEecc-CCCeEeeEEecCCceeEeeccCC-ceEEEeccchh
Confidence 999999997 78999999999999999999998887 77899999999998888776644 49999999988
Q ss_pred eEEEEecC----------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 IVKTYTGN----------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ~~~~~~~~----------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+..+..+ ....+++|++||..|.+|..|+.|+||.++
T Consensus 266 ~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~~irv~qv~ 313 (315)
T KOG0279|consen 266 VVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDNVIRVWQVA 313 (315)
T ss_pred hhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCCcEEEEEee
Confidence 87766321 124689999999999999999999999886
No 7
>KOG0272 consensus U4/U6 small nuclear ribonucleoprotein Prp4 (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=4.2e-44 Score=324.07 Aligned_cols=248 Identities=30% Similarity=0.540 Sum_probs=223.1
Q ss_pred CceeeccccccceeEEEECCC--CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 145 SDVTILEGHTSEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd--~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
..+.+|+||+..|.++.|+|. +..||||+.||++++|++.+.... +...+|...|..++|+
T Consensus 208 ~~~~~l~gH~~~v~~~~fhP~~~~~~lat~s~Dgtvklw~~~~e~~l-----------------~~l~gH~~RVs~VafH 270 (459)
T KOG0272|consen 208 NLLQTLRGHTSRVGAAVFHPVDSDLNLATASADGTVKLWKLSQETPL-----------------QDLEGHLARVSRVAFH 270 (459)
T ss_pred ceeEEEeccccceeeEEEccCCCccceeeeccCCceeeeccCCCcch-----------------hhhhcchhhheeeeec
Confidence 346799999999999999997 568999999999999998764321 1223445679999999
Q ss_pred CCCCEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 223 GEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
|+|++|+|+++|.+-++||+... ......||...|++++|+|+|..++||+.|..-+|||++++.+
T Consensus 271 PsG~~L~TasfD~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~------------- 337 (459)
T KOG0272|consen 271 PSGKFLGTASFDSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRC------------- 337 (459)
T ss_pred CCCceeeecccccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcE-------------
Confidence 99999999999999999998754 3445689999999999999999999999999999999998753
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
+..+.||..+|.+|+|+|+|..|||||.|++++|||++..+.+.++.+|...
T Consensus 338 ----------------------------im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nl 389 (459)
T KOG0272|consen 338 ----------------------------IMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNL 389 (459)
T ss_pred ----------------------------EEEecccccceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccch
Confidence 4567789999999999999999999999999999999999999999999999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
|..|+|+|... .+|+|+|.|++++||..++++++.++.||.+.|.++.++|++++|+|+|.|.++++|.
T Consensus 390 VS~Vk~~p~~g--------~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DRT~KLW~ 458 (459)
T KOG0272|consen 390 VSQVKYSPQEG--------YFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDRTIKLWR 458 (459)
T ss_pred hhheEecccCC--------eEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCceeeecc
Confidence 99999999432 4899999999999999999999999999999999999999999999999999999995
No 8
>KOG0286 consensus G-protein beta subunit [General function prediction only]
Probab=100.00 E-value=1.2e-41 Score=294.52 Aligned_cols=280 Identities=20% Similarity=0.373 Sum_probs=256.7
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc---
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--- 286 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~--- 286 (502)
+|...|+++.|++|.++++|++.||.+.|||.- ......+.-...-|...+|+|.|+++++|+.|....||++.+.
T Consensus 53 GH~~Ki~~~~ws~Dsr~ivSaSqDGklIvWDs~TtnK~haipl~s~WVMtCA~sPSg~~VAcGGLdN~Csiy~ls~~d~~ 132 (343)
T KOG0286|consen 53 GHLNKIYAMDWSTDSRRIVSASQDGKLIVWDSFTTNKVHAIPLPSSWVMTCAYSPSGNFVACGGLDNKCSIYPLSTRDAE 132 (343)
T ss_pred ccccceeeeEecCCcCeEEeeccCCeEEEEEcccccceeEEecCceeEEEEEECCCCCeEEecCcCceeEEEeccccccc
Confidence 356779999999999999999999999999964 3444556666678999999999999999999999999999865
Q ss_pred ---ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEE
Q 010759 287 ---EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAK 362 (502)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~ 362 (502)
...+.+..|.+-+.+..|.++..+++++.|.+..+||+.+++.+..|.||.+.|.+++++| +++.|++|+-|+..+
T Consensus 133 g~~~v~r~l~gHtgylScC~f~dD~~ilT~SGD~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~ak 212 (343)
T KOG0286|consen 133 GNVRVSRELAGHTGYLSCCRFLDDNHILTGSGDMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAK 212 (343)
T ss_pred ccceeeeeecCccceeEEEEEcCCCceEecCCCceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEeccccccee
Confidence 3456788999999999999999999999999999999999999999999999999999999 999999999999999
Q ss_pred EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEECC
Q 010759 363 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSP 440 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~sp 440 (502)
+||++.+.++++|.+|...|.+++|.|+|. -+++||.|+++|+||++..+.+..+.. -..+|++++||-
T Consensus 213 lWD~R~~~c~qtF~ghesDINsv~ffP~G~---------afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~ 283 (343)
T KOG0286|consen 213 LWDVRSGQCVQTFEGHESDINSVRFFPSGD---------AFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSK 283 (343)
T ss_pred eeeccCcceeEeecccccccceEEEccCCC---------eeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcc
Confidence 999999999999999999999999999996 689999999999999999888777653 246899999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.|++|.+|..|.++.+||.-.++.+..+.++. .|.++..+|||.-+++|++|.+++||.
T Consensus 284 SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgSWDs~lriW~ 343 (343)
T KOG0286|consen 284 SGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGSWDSTLRIWA 343 (343)
T ss_pred cccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecchhHheeecC
Confidence 99999999999999999999999998888765 699999999999999999999999994
No 9
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=5e-41 Score=311.73 Aligned_cols=353 Identities=24% Similarity=0.411 Sum_probs=273.2
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCC----------------------------------
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGA---------------------------------- 192 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~---------------------------------- 192 (502)
..++..|...|+...|||.|-|+|||...|+|||||......+.+-
T Consensus 52 ~~iYtEH~~~vtVAkySPsG~yiASGD~sG~vRIWdtt~~~hiLKnef~v~aG~I~Di~Wd~ds~RI~avGEGrerfg~~ 131 (603)
T KOG0318|consen 52 VDIYTEHAHQVTVAKYSPSGFYIASGDVSGKVRIWDTTQKEHILKNEFQVLAGPIKDISWDFDSKRIAAVGEGRERFGHV 131 (603)
T ss_pred eeeeccccceeEEEEeCCCceEEeecCCcCcEEEEeccCcceeeeeeeeecccccccceeCCCCcEEEEEecCccceeEE
Confidence 4567889999999999999999999999999999997542111000
Q ss_pred --------------CCCCceEEEE------------------------EeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 193 --------------QNGPLNVLVL------------------------KHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 193 --------------~~~~~~~~~~------------------------~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
+...++...+ ..++.....|++-|.|+.|+|||.+|++++.|
T Consensus 132 F~~DSG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsD 211 (603)
T KOG0318|consen 132 FLWDSGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSD 211 (603)
T ss_pred EEecCCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCC
Confidence 0000010011 11223334678899999999999999999999
Q ss_pred CcEEEEEC-CCceeEeec---CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc---CeEEEecCCC
Q 010759 235 GQARIWST-NGDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG---PTLDVDWRNN 307 (502)
Q Consensus 235 g~i~iw~~-~~~~~~~~~---~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~ 307 (502)
|.|.|||- .++....+. +|++.|++|.|+|++.+|+|+|.|++++|||+.+.++++++..... ....+-|. +
T Consensus 212 gki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWq-k 290 (603)
T KOG0318|consen 212 GKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQ-K 290 (603)
T ss_pred ccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEe-C
Confidence 99999995 466777776 8999999999999999999999999999999999999998876443 33455676 6
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee-----------eecc
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV-----------HDLR 376 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~-----------~~~~ 376 (502)
..+++-+.+|+|..++.....+++.+.||...|+++..+|++++|++|+.||.|.-|+..++..- ..+.
T Consensus 291 d~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~ 370 (603)
T KOG0318|consen 291 DHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVSPDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMA 370 (603)
T ss_pred CeEEEEEcCcEEEEecccCCChhheecccccceeEEEEcCCCCEEEeeccCceEEEEecCCccccccccccccceEEEEe
Confidence 67888899999999999988899999999999999999999999999999999999998654321 1111
Q ss_pred cCC-CcEEEEEE-------------------------------ccCCCC------------------------------C
Q 010759 377 EHS-KEIYTIRW-------------------------------SPTGSG------------------------------T 394 (502)
Q Consensus 377 ~~~-~~i~~~~~-------------------------------sp~g~~------------------------------~ 394 (502)
.+. +.+.++.| .+++.. .
T Consensus 371 ~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vA 450 (603)
T KOG0318|consen 371 ASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPKGLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVA 450 (603)
T ss_pred ecCCCcEEEEecCCeEEEEecccCcccccceeecCCCceeEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEE
Confidence 111 12222211 111100 0
Q ss_pred CCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE-EEEe-c
Q 010759 395 NNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV-KTYT-G 470 (502)
Q Consensus 395 ~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~-~~~~-~ 470 (502)
.+|. ...++.|+.||.|+||.+..+.. ...+..|+++|++|+||||+.|||+|...+.|.+|++.+++.. ..+. +
T Consensus 451 v~~~-~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~iT~vaySpd~~yla~~Da~rkvv~yd~~s~~~~~~~w~FH 529 (603)
T KOG0318|consen 451 VSPD-GSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAAITDVAYSPDGAYLAAGDASRKVVLYDVASREVKTNRWAFH 529 (603)
T ss_pred EcCC-CCEEEEecccceEEEEEecCCcccceeeeecccCCceEEEECCCCcEEEEeccCCcEEEEEcccCceecceeeee
Confidence 0111 12578899999999999986543 2345679999999999999999999999999999999988762 2233 4
Q ss_pred CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 471 NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 471 ~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
...|.+++|+|+.+++|+|+.|-+|.||++.
T Consensus 530 takI~~~aWsP~n~~vATGSlDt~Viiysv~ 560 (603)
T KOG0318|consen 530 TAKINCVAWSPNNKLVATGSLDTNVIIYSVK 560 (603)
T ss_pred eeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence 5679999999999999999999999999975
No 10
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=2.2e-43 Score=324.61 Aligned_cols=297 Identities=25% Similarity=0.431 Sum_probs=256.0
Q ss_pred CCccccCCCceeeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCC
Q 010759 137 SESFEIPNSDVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKD 215 (502)
Q Consensus 137 ~~~~~~~~~~~~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (502)
+..+.+|.+.++++.||+.+|+++.|.| .+++|+|||+|+.|+||++.+.. .+...+.+|..+
T Consensus 197 ~~rc~~Pkk~~~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~----------------~~lrtf~gH~k~ 260 (503)
T KOG0282|consen 197 EERCYLPKKLSHNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDR----------------RCLRTFKGHRKP 260 (503)
T ss_pred cceeeccHhheeeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCc----------------ceehhhhcchhh
Confidence 4567899999999999999999999999 79999999999999999987621 222344567899
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
|.+++|+.+|..|+|+|+|+.+++||++......--.....+++++|+|++ +.|++|+.|+.|+.||++++++++.|..
T Consensus 261 Vrd~~~s~~g~~fLS~sfD~~lKlwDtETG~~~~~f~~~~~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~ 340 (503)
T KOG0282|consen 261 VRDASFNNCGTSFLSASFDRFLKLWDTETGQVLSRFHLDKVPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDR 340 (503)
T ss_pred hhhhhccccCCeeeeeecceeeeeeccccceEEEEEecCCCceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHh
Confidence 999999999999999999999999999865443322334567999999999 8899999999999999999999999999
Q ss_pred cccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-
Q 010759 295 HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY- 371 (502)
Q Consensus 295 ~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~- 371 (502)
|.+++.++.|. .+.+|+++++|+++++|+.+.+.+++.... +...+.|+..+|++++++.-+.|+.|.||.+...-.
T Consensus 341 hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~ 420 (503)
T KOG0282|consen 341 HLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKNIADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRL 420 (503)
T ss_pred hhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchhhcchhhccCcceecCCCCCeehhhccCceEEEEeccccccc
Confidence 99999999985 678899999999999999999988875543 345688999999999999999999999998653221
Q ss_pred --eeecccCCCc--EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC-CEEE
Q 010759 372 --VHDLREHSKE--IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLA 446 (502)
Q Consensus 372 --~~~~~~~~~~--i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~la 446 (502)
...+.+|..+ -..+.|||+|. +|++|+.||.+.+||.++.+.+..+.+|..++..+.|+|.. ..+|
T Consensus 421 nkkK~feGh~vaGys~~v~fSpDG~---------~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skva 491 (503)
T KOG0282|consen 421 NKKKRFEGHSVAGYSCQVDFSPDGR---------TLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVA 491 (503)
T ss_pred CHhhhhcceeccCceeeEEEcCCCC---------eEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeE
Confidence 2345566433 45578999997 89999999999999999999999999999999999999975 6799
Q ss_pred EEeCCCcEEEEe
Q 010759 447 SGSLDKSMHIWS 458 (502)
Q Consensus 447 sgs~Dg~i~iw~ 458 (502)
|||.||.|++|+
T Consensus 492 t~~w~G~Ikiwd 503 (503)
T KOG0282|consen 492 TCGWDGLIKIWD 503 (503)
T ss_pred ecccCceeEecC
Confidence 999999999996
No 11
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.2e-41 Score=302.74 Aligned_cols=299 Identities=30% Similarity=0.511 Sum_probs=264.2
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.....+.||..+|+.+-|+|+-.++++++.|++|++||..++... +.+ .+|...|.++.|+..
T Consensus 99 ~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e-------------~~L----rGHt~sv~di~~~a~ 161 (406)
T KOG0295|consen 99 NLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELE-------------RSL----RGHTDSVFDISFDAS 161 (406)
T ss_pred CchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhh-------------hhh----hccccceeEEEEecC
Confidence 345678899999999999999999999999999999999887532 122 334566999999999
Q ss_pred CCEEEEEECCCcEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 225 GTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
|+++++++.|=.+++||.+. .+...+.+|...|.+++|-|.|++++|++.|.+|+.|++.++.+
T Consensus 162 Gk~l~tcSsDl~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~c-------------- 227 (406)
T KOG0295|consen 162 GKYLATCSSDLSAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYC-------------- 227 (406)
T ss_pred ccEEEecCCccchhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEeccccee--------------
Confidence 99999999999999999875 34456789999999999999999999999999999999988754
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcE
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 382 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i 382 (502)
+++|.+|...|..++.+.||.++|+|+.|.++++|-+.++.+...++.|..+|
T Consensus 228 ---------------------------v~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k~~lR~hEh~v 280 (406)
T KOG0295|consen 228 ---------------------------VKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCKAELREHEHPV 280 (406)
T ss_pred ---------------------------EEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhhhhhhccccce
Confidence 34667788888999999999999999999999999999999989999999999
Q ss_pred EEEEEccCCCCCC------CCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Q 010759 383 YTIRWSPTGSGTN------NPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHI 456 (502)
Q Consensus 383 ~~~~~sp~g~~~~------~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~i 456 (502)
-+++|.|...... +.++..++.+++.|++|++||+.++.+++++.+|...|..++|+|.|+||+++.+|+++++
T Consensus 281 Eci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrv 360 (406)
T KOG0295|consen 281 ECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRV 360 (406)
T ss_pred EEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEE
Confidence 9999998764221 1223348899999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCeeEEEEecCCC-EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 457 WSLKEGKIVKTYTGNGG-IFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 457 w~~~~~~~~~~~~~~~~-i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
||++++..++++..+.. +.+++|+.+--++++|+-|-++.||..|
T Consensus 361 wdl~~~~cmk~~~ah~hfvt~lDfh~~~p~VvTGsVdqt~KvwEcr 406 (406)
T KOG0295|consen 361 WDLKNLQCMKTLEAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 406 (406)
T ss_pred EEeccceeeeccCCCcceeEEEecCCCCceEEeccccceeeeeecC
Confidence 99999999999876544 8899999999999999999999999765
No 12
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=3.9e-40 Score=293.25 Aligned_cols=333 Identities=23% Similarity=0.379 Sum_probs=285.2
Q ss_pred CCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 144 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 144 ~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
...+.+|..|+.+|++|+.+|+.++++|||.|....||++.++.. .....+|...|+++.||.
T Consensus 54 DdS~~tF~~H~~svFavsl~P~~~l~aTGGgDD~AflW~~~~ge~-----------------~~eltgHKDSVt~~~Fsh 116 (399)
T KOG0296|consen 54 DDSLVTFDKHTDSVFAVSLHPNNNLVATGGGDDLAFLWDISTGEF-----------------AGELTGHKDSVTCCSFSH 116 (399)
T ss_pred ccceeehhhcCCceEEEEeCCCCceEEecCCCceEEEEEccCCcc-----------------eeEecCCCCceEEEEEcc
Confidence 445678999999999999999999999999999999999987642 122345688999999999
Q ss_pred CCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 224 EGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
+|.+|+||+.+|.|+||.... .....+...-..+.-++|||.++.|++|+.||.+.+|.+.++...+.+.+|..++.+-
T Consensus 117 dgtlLATGdmsG~v~v~~~stg~~~~~~~~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G 196 (399)
T KOG0296|consen 117 DGTLLATGDMSGKVLVFKVSTGGEQWKLDQEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCG 196 (399)
T ss_pred CceEEEecCCCccEEEEEcccCceEEEeecccCceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccc
Confidence 999999999999999999764 4455565556678889999999999999999999999999988889999999999888
Q ss_pred ecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc----
Q 010759 303 DWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR---- 376 (502)
Q Consensus 303 ~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---- 376 (502)
.|. +..+++++..|++|++|+..+..|+..+.+.. .+..++.++..+..+++|+.++.+++-+..+++.+....
T Consensus 197 ~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~ 276 (399)
T KOG0296|consen 197 EFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISLNLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVP 276 (399)
T ss_pred cccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCccccccccceeEeccCCccEEEEccccceEEEecCCCCc
Confidence 885 46788899999999999999999988776443 467899999999999999999999999998888877665
Q ss_pred ----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 377 ----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 377 ----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
.+...+.++.+.|..... .+.|+|+-||+|-|||+...++.+.+. |..+|+.+.|-+ ..+|++++.+|
T Consensus 277 ~l~~~~e~~~esve~~~~ss~l------pL~A~G~vdG~i~iyD~a~~~~R~~c~-he~~V~~l~w~~-t~~l~t~c~~g 348 (399)
T KOG0296|consen 277 ELKPSQEELDESVESIPSSSKL------PLAACGSVDGTIAIYDLAASTLRHICE-HEDGVTKLKWLN-TDYLLTACANG 348 (399)
T ss_pred cccccchhhhhhhhhccccccc------chhhcccccceEEEEecccchhheecc-CCCceEEEEEcC-cchheeeccCc
Confidence 234445566665544321 268899999999999998777665554 889999999998 78999999999
Q ss_pred cEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 453 SMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 453 ~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.|+.||.++|.++.+|.++. .|++++.+|+++++++++.|++..||.+.
T Consensus 349 ~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~~a~VF~v~ 398 (399)
T KOG0296|consen 349 KVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDNTALVFEVP 398 (399)
T ss_pred eEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCCeEEEEecC
Confidence 99999999999999999865 69999999999999999999999999863
No 13
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=1.4e-41 Score=330.63 Aligned_cols=311 Identities=27% Similarity=0.498 Sum_probs=258.2
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+|.-...++..-...|+|+.||+|+++||.|-.|..|++|.+...+. ++++. .+
T Consensus 366 lpSic~YT~~nt~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl--------------~~lk~-----------~~- 419 (707)
T KOG0263|consen 366 LPSICMYTFHNTYQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKL--------------KKLKD-----------AS- 419 (707)
T ss_pred CCcEEEEEEEEcCCcceeEeecCCcchhhccccccEEEEEecchhhh--------------ccccc-----------hh-
Confidence 44444455554556799999999999999999999999999864321 11111 00
Q ss_pred CCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 222 NGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+...+=+.+.|-.+.+-|... ....++.+|.+||++..|+|+.++|++||.|+++|+|.+.+..+.-.+.+|..||.
T Consensus 420 --~l~~~d~~sad~~~~~~D~~~~~~~~~L~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVw 497 (707)
T KOG0263|consen 420 --DLSNIDTESADVDVDMLDDDSSGTSRTLYGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVW 497 (707)
T ss_pred --hhccccccccchhhhhccccCCceeEEeecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCccee
Confidence 011122334444455555443 34456899999999999999999999999999999999999999999999999999
Q ss_pred EEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 301 DVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 301 ~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
++.|.+ ...|++++.|++.++|......|.+.|.||.+.|.|+.|||+..++++||.|.++|+||..++..++.|.+|.
T Consensus 498 dV~F~P~GyYFatas~D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~ 577 (707)
T KOG0263|consen 498 DVQFAPRGYYFATASHDQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHK 577 (707)
T ss_pred eEEecCCceEEEecCCCceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCC
Confidence 999964 5678999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
++|.+++|||+|. +|++|+.||.|+|||+.+++.+..+.+|.+.|++|.||.+|..||+||.|.+|++||+
T Consensus 578 ~~V~al~~Sp~Gr---------~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~ 648 (707)
T KOG0263|consen 578 GPVTALAFSPCGR---------YLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDL 648 (707)
T ss_pred CceEEEEEcCCCc---------eEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEc
Confidence 9999999999997 8999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCe------------------------eEEEEec-CCCEEEEEECCCCCEEEEE
Q 010759 460 KEGK------------------------IVKTYTG-NGGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 460 ~~~~------------------------~~~~~~~-~~~i~~~~ws~~g~~la~~ 489 (502)
..-. ++.+|.. ...|..+.|..-...|++|
T Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~llgs~~tK~tpv~~l~FtrrNl~L~~g 703 (707)
T KOG0263|consen 649 TKVIELLNLGHISTSNSAITQENNASSLLLGSFYTKNTPVVGLHFTRRNLLLAVG 703 (707)
T ss_pred hhhcccccccccccccccccccCCCCcceeeeeeecCceEEEEEEeccceeEEec
Confidence 6421 2333332 3457777777666555544
No 14
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.7e-40 Score=319.80 Aligned_cols=329 Identities=29% Similarity=0.510 Sum_probs=270.8
Q ss_pred eeeccc-cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~-H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
+..++. |++||..++|+|.|.+|++||.|+.+++||+..+. +...++ +|.+.|.++.|+|+-
T Consensus 97 irswKa~He~Pvi~ma~~~~g~LlAtggaD~~v~VWdi~~~~-------------~th~fk----G~gGvVssl~F~~~~ 159 (775)
T KOG0319|consen 97 IRSWKAIHEAPVITMAFDPTGTLLATGGADGRVKVWDIKNGY-------------CTHSFK----GHGGVVSSLLFHPHW 159 (775)
T ss_pred hHhHhhccCCCeEEEEEcCCCceEEeccccceEEEEEeeCCE-------------EEEEec----CCCceEEEEEeCCcc
Confidence 456776 99999999999999999999999999999987542 233333 457889999999976
Q ss_pred C--EEEEEECCCcEEEEECCCc--eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE----------
Q 010759 226 T--LLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ---------- 291 (502)
Q Consensus 226 ~--~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~---------- 291 (502)
. .|++|+.|+++++||.... +......|.+.|+++.|.+++..+++++.|+.+.+||+.+.+...+
T Consensus 160 ~~~lL~sg~~D~~v~vwnl~~~~tcl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~v 239 (775)
T KOG0319|consen 160 NRWLLASGATDGTVRVWNLNDKRTCLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESV 239 (775)
T ss_pred chhheeecCCCceEEEEEcccCchHHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeE
Confidence 5 4899999999999998743 2456788999999999999999999999999999999743211000
Q ss_pred ------------e-------------------------------------------------------------------
Q 010759 292 ------------F------------------------------------------------------------------- 292 (502)
Q Consensus 292 ------------~------------------------------------------------------------------- 292 (502)
+
T Consensus 240 v~l~~~~~~~~~~~~TaG~~g~~~~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~i 319 (775)
T KOG0319|consen 240 VRLREELGGKGEYIITAGGSGVVQYWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQI 319 (775)
T ss_pred EEechhcCCcceEEEEecCCceEEEEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhh
Confidence 0
Q ss_pred ------------------------------------------eecccCeEEEe-cCCCceEEEEcCCCeEEEEEcCCC--
Q 010759 293 ------------------------------------------EFHSGPTLDVD-WRNNVSFATSSTDNMIYVCKIGEN-- 327 (502)
Q Consensus 293 ------------------------------------------~~~~~~~~~~~-~~~~~~~~~~~~d~~i~~~~~~~~-- 327 (502)
.+|...+++++ |..+..+++++.|+++++|.+..+
T Consensus 320 vG~ndEI~Dm~~lG~e~~~laVATNs~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~ 399 (775)
T KOG0319|consen 320 VGYNDEILDMKFLGPEESHLAVATNSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCS 399 (775)
T ss_pred cCCchhheeeeecCCccceEEEEeCCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcc
Confidence 00011111121 122224788899999999988443
Q ss_pred --cceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc-----ee----eecccCCCcEEEEEEccCCCCCC
Q 010759 328 --RPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDK-----YV----HDLREHSKEIYTIRWSPTGSGTN 395 (502)
Q Consensus 328 --~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~-----~~----~~~~~~~~~i~~~~~sp~g~~~~ 395 (502)
.++....||++.|.+++++..+ .+|+++|.|.++++|++...+ .+ ...+.|...|++++++|+.+
T Consensus 400 ~~~~~a~~~gH~~svgava~~~~~asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndk--- 476 (775)
T KOG0319|consen 400 KSLCVAQANGHTNSVGAVAGSKLGASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDK--- 476 (775)
T ss_pred hhhhhhhhcccccccceeeecccCccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCc---
Confidence 3455677999999999997655 689999999999999987622 11 24567999999999999876
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CE
Q 010759 396 NPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GI 474 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i 474 (502)
++||||.|.+.+||++..+..+.++.||+..|+++.|+|..+.|||+|.|++|+||.+.+...++++.|+. .|
T Consensus 477 ------LiAT~SqDktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aV 550 (775)
T KOG0319|consen 477 ------LIATGSQDKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAV 550 (775)
T ss_pred ------eEEecccccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEeccceeeeeecCcccee
Confidence 89999999999999999999999999999999999999999999999999999999999999999999765 59
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 475 FEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 475 ~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.-++|-.+|+.|++|++||-|.+||++
T Consensus 551 lra~F~~~~~qliS~~adGliKlWnik 577 (775)
T KOG0319|consen 551 LRASFIRNGKQLISAGADGLIKLWNIK 577 (775)
T ss_pred EeeeeeeCCcEEEeccCCCcEEEEecc
Confidence 999999999999999999999999986
No 15
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=5.6e-41 Score=297.57 Aligned_cols=290 Identities=26% Similarity=0.469 Sum_probs=254.7
Q ss_pred ccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE
Q 010759 141 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 220 (502)
Q Consensus 141 ~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 220 (502)
..|.+...++.||.+.|.|+++.|-..+|+|||.|++|+|||+.+++.. ....+|...|..++
T Consensus 138 HapwKl~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~Lk-----------------ltltGhi~~vr~va 200 (460)
T KOG0285|consen 138 HAPWKLYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLK-----------------LTLTGHIETVRGVA 200 (460)
T ss_pred cCcceehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEE-----------------Eeecchhheeeeee
Confidence 3455566789999999999999999999999999999999999987521 12234567799999
Q ss_pred ECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+|+...|+++++.|+.|+.||++. +.+..+.+|-..|++|+.+|.-+.|++|+.|.++|+||+++..
T Consensus 201 vS~rHpYlFs~gedk~VKCwDLe~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~------------ 268 (460)
T KOG0285|consen 201 VSKRHPYLFSAGEDKQVKCWDLEYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRA------------ 268 (460)
T ss_pred ecccCceEEEecCCCeeEEEechhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccc------------
Confidence 999999999999999999999874 4556778999999999999999999999999999999998753
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
.+..+.||.++|..|.+.|....+++||.|++|++||++.++...++..|.
T Consensus 269 -----------------------------~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~agkt~~tlt~hk 319 (460)
T KOG0285|consen 269 -----------------------------SVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLRAGKTMITLTHHK 319 (460)
T ss_pred -----------------------------eEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeeccCceeEeeeccc
Confidence 345678999999999999999999999999999999999999999999999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
..+.+++.+|... .+||++.| .|+-|++..|..+..+.+|...|++++...|| ++++|++.|.|.+||.
T Consensus 320 ksvral~lhP~e~---------~fASas~d-nik~w~~p~g~f~~nlsgh~~iintl~~nsD~-v~~~G~dng~~~fwdw 388 (460)
T KOG0285|consen 320 KSVRALCLHPKEN---------LFASASPD-NIKQWKLPEGEFLQNLSGHNAIINTLSVNSDG-VLVSGGDNGSIMFWDW 388 (460)
T ss_pred ceeeEEecCCchh---------hhhccCCc-cceeccCCccchhhccccccceeeeeeeccCc-eEEEcCCceEEEEEec
Confidence 9999999998764 67888876 69999999999999999999999999998775 7889999999999999
Q ss_pred CCCeeEEEE---------ecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 460 KEGKIVKTY---------TGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 460 ~~~~~~~~~---------~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
++|.-.+.. ..+.+|++.||...|.+|++|..|.+|.+|.
T Consensus 389 ksg~nyQ~~~t~vqpGSl~sEagI~as~fDktg~rlit~eadKtIk~~k 437 (460)
T KOG0285|consen 389 KSGHNYQRGQTIVQPGSLESEAGIFASCFDKTGSRLITGEADKTIKMYK 437 (460)
T ss_pred CcCcccccccccccCCccccccceeEEeecccCceEEeccCCcceEEEe
Confidence 988543332 2345799999999999999999999999994
No 16
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=6.3e-39 Score=309.26 Aligned_cols=331 Identities=24% Similarity=0.425 Sum_probs=280.0
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..++.||...|.++.||.|.++|++||.|.++|||.+...+.. ......+|..+|-.+-|..+..
T Consensus 138 ~r~~~g~fddi~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~~---------------~~~~l~gHkd~VvacfF~~~~~ 202 (893)
T KOG0291|consen 138 HRTYLGHFDDITSIDWSDDSRLLVTGSRDLSARLFGVDGNKNL---------------FTYALNGHKDYVVACFFGANSL 202 (893)
T ss_pred eeeecCCccceeEEEeccCCceEEeccccceEEEEEecccccc---------------ceEeccCCCcceEEEEeccCcc
Confidence 4577899999999999999999999999999999998653311 1112346788999999999999
Q ss_pred EEEEEECCCcEEEEECC------------------------Cce-----------eEeecCCCCCEEEEEecCCCCEEEE
Q 010759 227 LLATGSYDGQARIWSTN------------------------GDL-----------KCTLSKHKGPIFSLKWNKKGDYLLT 271 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~------------------------~~~-----------~~~~~~h~~~V~~l~~~~~~~~l~s 271 (502)
.+++-+.||.+.+|... ++. +..+......|++.+||+..+.|++
T Consensus 203 ~l~tvskdG~l~~W~~~~~P~~~~~~~kd~eg~~d~~~~~~~Eek~~~~~~~k~~k~~ln~~~~kvtaa~fH~~t~~lvv 282 (893)
T KOG0291|consen 203 DLYTVSKDGALFVWTCDLRPPELDKAEKDEEGSDDEEMDEDGEEKTHKIFWYKTKKHYLNQNSSKVTAAAFHKGTNLLVV 282 (893)
T ss_pred eEEEEecCceEEEEEecCCCcccccccccccccccccccccchhhhcceEEEEEEeeeecccccceeeeeccCCceEEEE
Confidence 99999999999999754 111 1112223478999999999999999
Q ss_pred ecCCCeEEEEeccCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC
Q 010759 272 GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG 349 (502)
Q Consensus 272 gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 349 (502)
|-..|...+|.+....+++.+.....++.++.|. .+...+.++.=|.+.||+.....-+....||...++|++++|||
T Consensus 283 gFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDg 362 (893)
T KOG0291|consen 283 GFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDG 362 (893)
T ss_pred EecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccccccceeeEEECCCC
Confidence 9999999999999999999998888888888886 34334445556799999999988888889999999999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-----------
Q 010759 350 SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE----------- 418 (502)
Q Consensus 350 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~----------- 418 (502)
+++|||++||+|+|||..++-|+.+|..|...|+.+.|+..|. .|++.|.||+||.||+.
T Consensus 363 q~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~---------~llssSLDGtVRAwDlkRYrNfRTft~P 433 (893)
T KOG0291|consen 363 QLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGN---------VLLSSSLDGTVRAWDLKRYRNFRTFTSP 433 (893)
T ss_pred cEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEecCC---------EEEEeecCCeEEeeeecccceeeeecCC
Confidence 9999999999999999999999999999999999999998885 56777777777777753
Q ss_pred ---------------------------------CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC-ee
Q 010759 419 ---------------------------------LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG-KI 464 (502)
Q Consensus 419 ---------------------------------~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~-~~ 464 (502)
+|+.+-.+.||.+||.+++|+|+|..||+||+|.+|++|++-.. ..
T Consensus 434 ~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~l~f~~~~~~LaS~SWDkTVRiW~if~s~~~ 513 (893)
T KOG0291|consen 434 EPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSGLSFSPDGSLLASGSWDKTVRIWDIFSSSGT 513 (893)
T ss_pred CceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCcceeeEEccccCeEEeccccceEEEEEeeccCce
Confidence 34444556799999999999999999999999999999998543 34
Q ss_pred EEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 465 VKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 465 ~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.++.....+.+++|+|||+.||++..||.|.+||..
T Consensus 514 vEtl~i~sdvl~vsfrPdG~elaVaTldgqItf~d~~ 550 (893)
T KOG0291|consen 514 VETLEIRSDVLAVSFRPDGKELAVATLDGQITFFDIK 550 (893)
T ss_pred eeeEeeccceeEEEEcCCCCeEEEEEecceEEEEEhh
Confidence 6677777889999999999999999999999999974
No 17
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=3.4e-41 Score=303.80 Aligned_cols=278 Identities=25% Similarity=0.481 Sum_probs=248.7
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
..+|..+.|.|+|+.|++|+..|...+|+...- ....+..|..+|.++.|++++.+++||+.+|.|++|++.-......
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~fnFEtilQaHDs~Vr~m~ws~~g~wmiSgD~gG~iKyWqpnmnnVk~~ 175 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSFNFETILQAHDSPVRTMKWSHNGTWMISGDKGGMIKYWQPNMNNVKII 175 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCceeeHHHHhhhhcccceeEEEccCCCEEEEcCCCceEEecccchhhhHHh
Confidence 457999999999999999999999999997432 2224578999999999999999999999999999999865554444
Q ss_pred eeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 010759 292 FEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 292 ~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~ 370 (502)
...|...|.++.|. ++..|+++++|++|++|+....+.-..+.||.-.|.|++|+|...+||+||.|..|++||.+++.
T Consensus 176 ~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~ 255 (464)
T KOG0284|consen 176 QAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGS 255 (464)
T ss_pred hHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcc
Confidence 45555888999885 67889999999999999999988888899999999999999999999999999999999999999
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC-CCEEEEEe
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT-GEYLASGS 449 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-g~~lasgs 449 (502)
++.++..|...|..+.|+|++. +|+|+|.|..++++|+++.+.++++++|+..|+++.|+|- ..+|++|+
T Consensus 256 cl~tlh~HKntVl~~~f~~n~N---------~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~~~lftsgg 326 (464)
T KOG0284|consen 256 CLATLHGHKNTVLAVKFNPNGN---------WLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLNESLFTSGG 326 (464)
T ss_pred hhhhhhhccceEEEEEEcCCCC---------eeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccccccceeecc
Confidence 9999999999999999999985 8999999999999999999999999999999999999996 46888999
Q ss_pred CCCcEEEEeCCCCeeEEEE--ecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 450 LDKSMHIWSLKEGKIVKTY--TGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~--~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.||.|..|.+...+.+..+ .+.+.|++++|+|-|.+||+|+.|.++++|.
T Consensus 327 ~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~ 378 (464)
T KOG0284|consen 327 SDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWT 378 (464)
T ss_pred CCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeec
Confidence 9999999999854444443 3467899999999999999999999999995
No 18
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=9.9e-39 Score=273.70 Aligned_cols=289 Identities=27% Similarity=0.509 Sum_probs=237.0
Q ss_pred eeeccccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
++.+.||++.|-.++|+|- |..|||+|.|..||||++..+. .+..+... ...|...|..++|+|.|
T Consensus 7 ~~~~~gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~-----------s~~ck~vl--d~~hkrsVRsvAwsp~g 73 (312)
T KOG0645|consen 7 EQKLSGHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGD-----------SWTCKTVL--DDGHKRSVRSVAWSPHG 73 (312)
T ss_pred EEeecCCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCC-----------cEEEEEec--cccchheeeeeeecCCC
Confidence 4678999999999999998 9999999999999999976422 12222221 23578899999999999
Q ss_pred CEEEEEECCCcEEEEECCC---ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 226 TLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
++|++|+.|.++.||.-.. +...++.+|...|.+++|+++|++|++||.|++|-||.+....-
T Consensus 74 ~~La~aSFD~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiWe~deddE-------------- 139 (312)
T KOG0645|consen 74 RYLASASFDATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIWEIDEDDE-------------- 139 (312)
T ss_pred cEEEEeeccceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEEEecCCCc--------------
Confidence 9999999999999997653 45668999999999999999999999999999999998764321
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC---CCceeeecccCC
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK---QDKYVHDLREHS 379 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~---~~~~~~~~~~~~ 379 (502)
-..+..+.+|+..|..+.|||...+|+++|.|.+|++|+-. ...+++++.+|.
T Consensus 140 ------------------------fec~aVL~~HtqDVK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~ 195 (312)
T KOG0645|consen 140 ------------------------FECIAVLQEHTQDVKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHE 195 (312)
T ss_pred ------------------------EEEEeeeccccccccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCcc
Confidence 11234677899999999999999999999999999999765 345788999999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
..|.+++|.|.|. -|++++.|++|+||-..+.-. .-|..+++.++|. ...|||++.|+.|++|.-
T Consensus 196 ~TVW~~~F~~~G~---------rl~s~sdD~tv~Iw~~~~~~~----~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~~ 260 (312)
T KOG0645|consen 196 NTVWSLAFDNIGS---------RLVSCSDDGTVSIWRLYTDLS----GMHSRALYDVPWD--NGVIASGGGDDAIRLFKE 260 (312)
T ss_pred ceEEEEEecCCCc---------eEEEecCCcceEeeeeccCcc----hhcccceEeeeec--ccceEeccCCCEEEEEEe
Confidence 9999999999985 689999999999997552211 2377899999998 458999999999999986
Q ss_pred CCCe------eEE--EEecCCCEEEEEECCC-CCEEEEEECCCeEEEEEee
Q 010759 460 KEGK------IVK--TYTGNGGIFEVCWNKE-GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 460 ~~~~------~~~--~~~~~~~i~~~~ws~~-g~~la~~~~~~~v~v~~~~ 501 (502)
...- ++. ...+...|++++|+|. .++|++|+.||.|.+|.+.
T Consensus 261 s~~~d~p~~~l~~~~~~aHe~dVNsV~w~p~~~~~L~s~~DDG~v~~W~l~ 311 (312)
T KOG0645|consen 261 SDSPDEPSWNLLAKKEGAHEVDVNSVQWNPKVSNRLASGGDDGIVNFWELE 311 (312)
T ss_pred cCCCCCchHHHHHhhhcccccccceEEEcCCCCCceeecCCCceEEEEEec
Confidence 6431 111 1122346999999995 6899999999999999874
No 19
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=5.7e-39 Score=271.83 Aligned_cols=285 Identities=26% Similarity=0.454 Sum_probs=242.9
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC--
Q 010759 167 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-- 244 (502)
Q Consensus 167 ~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-- 244 (502)
-+|+|+|.|.+||+|...+|.+..+. . ...+.|..+...|++++|+.|+. ..||+||++.
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTi-------------q----h~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~n 72 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTI-------------Q----HPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNN 72 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEE-------------e----cCccceeeEEEcCCcchhhhccC-CeeEEEEccCCC
Confidence 47999999999999999888654321 1 12467999999999999998876 6899999864
Q ss_pred -ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEE
Q 010759 245 -DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVC 322 (502)
Q Consensus 245 -~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~ 322 (502)
..+.++.+|+..|+++.|.-+|+.+++||.||+++|||++...+.+.|... .+|.++... +...++++..++.|++|
T Consensus 73 p~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~-spVn~vvlhpnQteLis~dqsg~irvW 151 (311)
T KOG0315|consen 73 PNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHN-SPVNTVVLHPNQTELISGDQSGNIRVW 151 (311)
T ss_pred CCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCC-CCcceEEecCCcceEEeecCCCcEEEE
Confidence 367899999999999999999999999999999999999997776666654 788888765 56788999999999999
Q ss_pred EcCCCcceeeec-CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC------ceeeecccCCCcEEEEEEccCCCCCC
Q 010759 323 KIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD------KYVHDLREHSKEIYTIRWSPTGSGTN 395 (502)
Q Consensus 323 ~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~------~~~~~~~~~~~~i~~~~~sp~g~~~~ 395 (502)
|+........+. .....|.++...|||.+++.+..-|...+|++-.. .++..++.|.+-+..+.+||+++
T Consensus 152 Dl~~~~c~~~liPe~~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k--- 228 (311)
T KOG0315|consen 152 DLGENSCTHELIPEDDTSIQSLTVMPDGSMLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVK--- 228 (311)
T ss_pred EccCCccccccCCCCCcceeeEEEcCCCcEEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCc---
Confidence 999876554443 33457999999999999999999999999998654 34567889999999999999997
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-C
Q 010759 396 NPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-G 473 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~ 473 (502)
+||++|.|.+++||+.++. +.-..+.+|...+++.+||.||+||+|||.|+.+++|++..++.++.+.++. .
T Consensus 229 ------~lat~ssdktv~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~~~k~v~qy~gh~K~ 302 (311)
T KOG0315|consen 229 ------YLATCSSDKTVKIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLSAGKEVRQYQGHHKA 302 (311)
T ss_pred ------EEEeecCCceEEEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccccCceeeecCCcccc
Confidence 8999999999999999987 5556789999999999999999999999999999999999999999998754 3
Q ss_pred EEEEEE
Q 010759 474 IFEVCW 479 (502)
Q Consensus 474 i~~~~w 479 (502)
..+++.
T Consensus 303 ~vc~~l 308 (311)
T KOG0315|consen 303 AVCVAL 308 (311)
T ss_pred cEEEEe
Confidence 444443
No 20
>KOG0279 consensus G protein beta subunit-like protein [Signal transduction mechanisms]
Probab=100.00 E-value=6.9e-39 Score=275.80 Aligned_cols=246 Identities=29% Similarity=0.502 Sum_probs=210.5
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.+..|+||...|..++.++||++.+|||.|+++++||+.+++. .+.+. +|...|.+++|++|.
T Consensus 55 ~~r~~~GHsH~v~dv~~s~dg~~alS~swD~~lrlWDl~~g~~-------------t~~f~----GH~~dVlsva~s~dn 117 (315)
T KOG0279|consen 55 PVRRLTGHSHFVSDVVLSSDGNFALSASWDGTLRLWDLATGES-------------TRRFV----GHTKDVLSVAFSTDN 117 (315)
T ss_pred eeeeeeccceEecceEEccCCceEEeccccceEEEEEecCCcE-------------EEEEE----ecCCceEEEEecCCC
Confidence 3578999999999999999999999999999999999987642 12333 457889999999999
Q ss_pred CEEEEEECCCcEEEEECCCceeEeecCC--CCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 226 TLLATGSYDGQARIWSTNGDLKCTLSKH--KGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~~~~~~~~h--~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
+.++||+.|++|++|++-+.++.++..+ .+-|.+++|+|+ ..+|+++|.|++|++||+++.+..
T Consensus 118 ~qivSGSrDkTiklwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~l~------------ 185 (315)
T KOG0279|consen 118 RQIVSGSRDKTIKLWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQLR------------ 185 (315)
T ss_pred ceeecCCCcceeeeeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcchh------------
Confidence 9999999999999999999888877655 678999999998 679999999999999999876532
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
..|.||++.++.+++||||.++++|+.||.+.+||++.++.+..+ .+...
T Consensus 186 -----------------------------~~~~gh~~~v~t~~vSpDGslcasGgkdg~~~LwdL~~~k~lysl-~a~~~ 235 (315)
T KOG0279|consen 186 -----------------------------TTFIGHSGYVNTVTVSPDGSLCASGGKDGEAMLWDLNEGKNLYSL-EAFDI 235 (315)
T ss_pred -----------------------------hccccccccEEEEEECCCCCEEecCCCCceEEEEEccCCceeEec-cCCCe
Confidence 356689999999999999999999999999999999999988776 46789
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC----C-----CCCEEEEEECCCCCEEEEEeCCC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG----H-----REPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~----h-----~~~v~~l~~spdg~~lasgs~Dg 452 (502)
|.+++|+|+-. .|+ +..+..|+|||+.++.++.+++. - .....+++||+||+.|.+|-.|+
T Consensus 236 v~sl~fspnry---------wL~-~at~~sIkIwdl~~~~~v~~l~~d~~g~s~~~~~~~clslaws~dG~tLf~g~td~ 305 (315)
T KOG0279|consen 236 VNSLCFSPNRY---------WLC-AATATSIKIWDLESKAVVEELKLDGIGPSSKAGDPICLSLAWSADGQTLFAGYTDN 305 (315)
T ss_pred EeeEEecCCce---------eEe-eccCCceEEEeccchhhhhhccccccccccccCCcEEEEEEEcCCCcEEEeeecCC
Confidence 99999999862 444 44556799999999988776542 1 12356789999999999999999
Q ss_pred cEEEEeCC
Q 010759 453 SMHIWSLK 460 (502)
Q Consensus 453 ~i~iw~~~ 460 (502)
.|++|.+.
T Consensus 306 ~irv~qv~ 313 (315)
T KOG0279|consen 306 VIRVWQVA 313 (315)
T ss_pred cEEEEEee
Confidence 99999875
No 21
>KOG0284 consensus Polyadenylation factor I complex, subunit PFS2 [RNA processing and modification]
Probab=100.00 E-value=4.6e-40 Score=296.54 Aligned_cols=282 Identities=26% Similarity=0.480 Sum_probs=251.4
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..+|+.+.|.|+|+.|++|+.-|..-+|+.... .+......|.++|.++.|+++|.+++||+.
T Consensus 96 kc~V~~v~WtPeGRRLltgs~SGEFtLWNg~~f-----------------nFEtilQaHDs~Vr~m~ws~~g~wmiSgD~ 158 (464)
T KOG0284|consen 96 KCPVNVVRWTPEGRRLLTGSQSGEFTLWNGTSF-----------------NFETILQAHDSPVRTMKWSHNGTWMISGDK 158 (464)
T ss_pred ccceeeEEEcCCCceeEeecccccEEEecCcee-----------------eHHHHhhhhcccceeEEEccCCCEEEEcCC
Confidence 457999999999999999999999999985321 112223457889999999999999999999
Q ss_pred CCcEEEEECCCceeEeecCCC-CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc-eEE
Q 010759 234 DGQARIWSTNGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFA 311 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~-~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 311 (502)
+|.|++|+.+-..+..+..|. .+|.+++|+|....|++||.||+|+|||....+....+.+|.-.+.+++|++.. .++
T Consensus 159 gG~iKyWqpnmnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLia 238 (464)
T KOG0284|consen 159 GGMIKYWQPNMNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIA 238 (464)
T ss_pred CceEEecccchhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCchhheeccCCCCcceeccCCccceeE
Confidence 999999998876666666665 899999999999999999999999999998887777889999999999998654 567
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCC
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 391 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g 391 (502)
+++.|+.|.+||.+++.++.++.+|...|..+.|+|++++|+|+|.|..++++|+++.+.+..+++|...++++.|+|-.
T Consensus 239 sgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~~ 318 (464)
T KOG0284|consen 239 SGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPLN 318 (464)
T ss_pred EccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeecccccc
Confidence 88999999999999999999999999999999999999999999999999999999999999999999999999999976
Q ss_pred CCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 392 SGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 392 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
. .+|.+|+.||.|..|.+...+++..+ .+|...|++++|+|=|..|++|+.|.++++|...
T Consensus 319 ~--------~lftsgg~Dgsvvh~~v~~~~p~~~i~~AHd~~iwsl~~hPlGhil~tgsnd~t~rfw~r~ 380 (464)
T KOG0284|consen 319 E--------SLFTSGGSDGSVVHWVVGLEEPLGEIPPAHDGEIWSLAYHPLGHILATGSNDRTVRFWTRN 380 (464)
T ss_pred c--------cceeeccCCCceEEEeccccccccCCCcccccceeeeeccccceeEeecCCCcceeeeccC
Confidence 4 38899999999999999866665554 5799999999999999999999999999999754
No 22
>KOG0318 consensus WD40 repeat stress protein/actin interacting protein [Cytoskeleton]
Probab=100.00 E-value=5.7e-37 Score=284.82 Aligned_cols=330 Identities=22% Similarity=0.353 Sum_probs=261.3
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..++.|..=|+|++|||||.+++|+|.||++.|||=.++.... .+. ....|.+.|.+++|+||++.
T Consensus 184 ~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg-------------~l~-~~~aHkGsIfalsWsPDs~~ 249 (603)
T KOG0318|consen 184 SSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVG-------------ELE-DSDAHKGSIFALSWSPDSTQ 249 (603)
T ss_pred ecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccEEE-------------Eec-CCCCccccEEEEEECCCCce
Confidence 4677899999999999999999999999999999966654211 111 13467899999999999999
Q ss_pred EEEEECCCcEEEEECCCc--------------------------------------------eeEeecCCCCCEEEEEec
Q 010759 228 LATGSYDGQARIWSTNGD--------------------------------------------LKCTLSKHKGPIFSLKWN 263 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~--------------------------------------------~~~~~~~h~~~V~~l~~~ 263 (502)
|++++.|.+++|||+... ....+.+|..+|++|..+
T Consensus 250 ~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl~G~in~ln~~d~~~~~~i~GHnK~ITaLtv~ 329 (603)
T KOG0318|consen 250 FLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSLSGTINYLNPSDPSVLKVISGHNKSITALTVS 329 (603)
T ss_pred EEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEcCcEEEEecccCCChhheecccccceeEEEEc
Confidence 999999999999985321 012346899999999999
Q ss_pred CCCCEEEEecCCCeEEEEeccCcceeEEe-eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC------------cc-
Q 010759 264 KKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN------------RP- 329 (502)
Q Consensus 264 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~------------~~- 329 (502)
|++.+|++|+.||.|.-|+..++..-+.. ..|...+..+.-.....+.+++.|.++++.++..+ +|
T Consensus 330 ~d~~~i~SgsyDG~I~~W~~~~g~~~~~~g~~h~nqI~~~~~~~~~~~~t~g~Dd~l~~~~~~~~~~t~~~~~~lg~QP~ 409 (603)
T KOG0318|consen 330 PDGKTIYSGSYDGHINSWDSGSGTSDRLAGKGHTNQIKGMAASESGELFTIGWDDTLRVISLKDNGYTKSEVVKLGSQPK 409 (603)
T ss_pred CCCCEEEeeccCceEEEEecCCccccccccccccceEEEEeecCCCcEEEEecCCeEEEEecccCcccccceeecCCCce
Confidence 99999999999999999999887644333 45677777777666677778888888887765321 11
Q ss_pred ------------------eeeecCCC--------cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee--eecccCCCc
Q 010759 330 ------------------IKTFAGHQ--------GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV--HDLREHSKE 381 (502)
Q Consensus 330 ------------------~~~~~~h~--------~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~~~~~ 381 (502)
+..+..+. -...+++++|++..++.|+.|+.++||.+..+... ..+..|.++
T Consensus 410 ~lav~~d~~~avv~~~~~iv~l~~~~~~~~~~~~y~~s~vAv~~~~~~vaVGG~Dgkvhvysl~g~~l~ee~~~~~h~a~ 489 (603)
T KOG0318|consen 410 GLAVLSDGGTAVVACISDIVLLQDQTKVSSIPIGYESSAVAVSPDGSEVAVGGQDGKVHVYSLSGDELKEEAKLLEHRAA 489 (603)
T ss_pred eEEEcCCCCEEEEEecCcEEEEecCCcceeeccccccceEEEcCCCCEEEEecccceEEEEEecCCcccceeeeecccCC
Confidence 11122222 23568999999999999999999999999876543 235578999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE-EeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY-SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
|+.++|||++. +||+|...+.+.+||+.+.+... .+.-|...|++|+|+|+..++||||.|-.|.||+++
T Consensus 490 iT~vaySpd~~---------yla~~Da~rkvv~yd~~s~~~~~~~w~FHtakI~~~aWsP~n~~vATGSlDt~Viiysv~ 560 (603)
T KOG0318|consen 490 ITDVAYSPDGA---------YLAAGDASRKVVLYDVASREVKTNRWAFHTAKINCVAWSPNNKLVATGSLDTNVIIYSVK 560 (603)
T ss_pred ceEEEECCCCc---------EEEEeccCCcEEEEEcccCceecceeeeeeeeEEEEEeCCCceEEEeccccceEEEEEcc
Confidence 99999999997 89999999999999999877632 344489999999999999999999999999999998
Q ss_pred CCeeEEEE--ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 461 EGKIVKTY--TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 461 ~~~~~~~~--~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.....-.. .+..+|+.+.|- +.+.+++.+.|.+|++|++.
T Consensus 561 kP~~~i~iknAH~~gVn~v~wl-de~tvvSsG~Da~iK~W~v~ 602 (603)
T KOG0318|consen 561 KPAKHIIIKNAHLGGVNSVAWL-DESTVVSSGQDANIKVWNVT 602 (603)
T ss_pred ChhhheEeccccccCceeEEEe-cCceEEeccCcceeEEeccc
Confidence 74322222 234569999995 45588889999999999874
No 23
>KOG0319 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.4e-38 Score=305.02 Aligned_cols=344 Identities=22% Similarity=0.329 Sum_probs=286.0
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCC--------------------------C-CCCce
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGA--------------------------Q-NGPLN 198 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~--------------------------~-~~~~~ 198 (502)
..+++++|.+.|++++|++|+..++++|.|..+.|||+.+.+..... . .+.+.
T Consensus 184 cl~~~~~H~S~vtsL~~~~d~~~~ls~~RDkvi~vwd~~~~~~l~~lp~ye~~E~vv~l~~~~~~~~~~~~TaG~~g~~~ 263 (775)
T KOG0319|consen 184 CLHTMILHKSAVTSLAFSEDSLELLSVGRDKVIIVWDLVQYKKLKTLPLYESLESVVRLREELGGKGEYIITAGGSGVVQ 263 (775)
T ss_pred HHHHHHhhhhheeeeeeccCCceEEEeccCcEEEEeehhhhhhhheechhhheeeEEEechhcCCcceEEEEecCCceEE
Confidence 36788999999999999999999999999999999998432111000 0 00000
Q ss_pred EEE----------------------------------------EE-----eeecccccCCCCeEEEEE-CCCCCEEEEEE
Q 010759 199 VLV----------------------------------------LK-----HVKGRTNEKSKDVTTLDW-NGEGTLLATGS 232 (502)
Q Consensus 199 ~~~----------------------------------------~~-----~~~~~~~~~~~~V~~l~~-s~~~~~l~sg~ 232 (502)
.+. +. .+..+..+.+..|.+++| .|+.++|+.++
T Consensus 264 ~~d~es~~~~~~~~~~~~~e~~~~~~~~~~~~~l~vtaeQnl~l~d~~~l~i~k~ivG~ndEI~Dm~~lG~e~~~laVAT 343 (775)
T KOG0319|consen 264 YWDSESGKCVYKQRQSDSEEIDHLLAIESMSQLLLVTAEQNLFLYDEDELTIVKQIVGYNDEILDMKFLGPEESHLAVAT 343 (775)
T ss_pred EEecccchhhhhhccCCchhhhcceeccccCceEEEEccceEEEEEccccEEehhhcCCchhheeeeecCCccceEEEEe
Confidence 000 00 011122344567888876 46789999999
Q ss_pred CCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc----ceeEEeeecccCeEEEecC--C
Q 010759 233 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFEFHSGPTLDVDWR--N 306 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~--~ 306 (502)
..+.+|+++..+.....+.+|+..|.++....+|..|+|||.|+++++|-++.+ .++....+|...+.++... .
T Consensus 344 Ns~~lr~y~~~~~~c~ii~GH~e~vlSL~~~~~g~llat~sKD~svilWr~~~~~~~~~~~a~~~gH~~svgava~~~~~ 423 (775)
T KOG0319|consen 344 NSPELRLYTLPTSYCQIIPGHTEAVLSLDVWSSGDLLATGSKDKSVILWRLNNNCSKSLCVAQANGHTNSVGAVAGSKLG 423 (775)
T ss_pred CCCceEEEecCCCceEEEeCchhheeeeeecccCcEEEEecCCceEEEEEecCCcchhhhhhhhcccccccceeeecccC
Confidence 999999999888777789999999999996667789999999999999977433 2445667888888887763 3
Q ss_pred CceEEEEcCCCeEEEEEcCCCcc-----ee----eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 307 NVSFATSSTDNMIYVCKIGENRP-----IK----TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~-----~~----~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
...|+++|.|.++.+|++...++ +. +...|...|+||+++|+.++|||||.|.+.+||++........+.+
T Consensus 424 asffvsvS~D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqDktaKiW~le~~~l~~vLsG 503 (775)
T KOG0319|consen 424 ASFFVSVSQDCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQDKTAKIWDLEQLRLLGVLSG 503 (775)
T ss_pred ccEEEEecCCceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccccceeeecccCceEEEEeeC
Confidence 45688999999999999976221 11 2347899999999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
|...++++.|+|... +++|+|.|++|+||.+.+..++.++.||...|..+.|-.+|+.|+||+.||.|++|
T Consensus 504 H~RGvw~V~Fs~~dq---------~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~qliS~~adGliKlW 574 (775)
T KOG0319|consen 504 HTRGVWCVSFSKNDQ---------LLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQLISAGADGLIKLW 574 (775)
T ss_pred CccceEEEEeccccc---------eeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcEEEeccCCCcEEEE
Confidence 999999999999865 79999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 458 SLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 458 ~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+++++..++++.. +..|++++-+|.+..+++|+.||.|.+|
T Consensus 575 nikt~eC~~tlD~H~DrvWaL~~~~~~~~~~tgg~Dg~i~~w 616 (775)
T KOG0319|consen 575 NIKTNECEMTLDAHNDRVWALSVSPLLDMFVTGGGDGRIIFW 616 (775)
T ss_pred eccchhhhhhhhhccceeEEEeecCccceeEecCCCeEEEEe
Confidence 9999999999975 4579999999999999999999999999
No 24
>KOG0263 consensus Transcription initiation factor TFIID, subunit TAF5 (also component of histone acetyltransferase SAGA) [Transcription]
Probab=100.00 E-value=8.3e-39 Score=311.31 Aligned_cols=270 Identities=27% Similarity=0.476 Sum_probs=239.9
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
...|+|..|++|+.+||.|-.|..|++|.........+..- . +- ..+=+.+.|-.+.+.|........++
T Consensus 378 ~~~v~ca~fSddssmlA~Gf~dS~i~~~Sl~p~kl~~lk~~-~------~l---~~~d~~sad~~~~~~D~~~~~~~~~L 447 (707)
T KOG0263|consen 378 YQGVTCAEFSDDSSMLACGFVDSSVRVWSLTPKKLKKLKDA-S------DL---SNIDTESADVDVDMLDDDSSGTSRTL 447 (707)
T ss_pred CCcceeEeecCCcchhhccccccEEEEEecchhhhccccch-h------hh---ccccccccchhhhhccccCCceeEEe
Confidence 45799999999999999999999999999865433222211 1 11 12334556666788888888778889
Q ss_pred eecccCeEEEecCCCc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 293 EFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
.+|.+||....|.+.. .+++++.|.++++|.+.+...+..+.||..+|+.+.|+|-|-+|||+|.|++.++|......+
T Consensus 448 ~GH~GPVyg~sFsPd~rfLlScSED~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~P 527 (707)
T KOG0263|consen 448 YGHSGPVYGCSFSPDRRFLLSCSEDSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNKP 527 (707)
T ss_pred ecCCCceeeeeecccccceeeccCCcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCCc
Confidence 9999999999997655 456888999999999999999999999999999999999999999999999999999999999
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
.+.+.+|...+.|+.|+|+.. |+++||.|.+||+||+.+|..+..|.||.++|++|+|||+|+|||+|+.|
T Consensus 528 lRifaghlsDV~cv~FHPNs~---------Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 528 LRIFAGHLSDVDCVSFHPNSN---------YVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDED 598 (707)
T ss_pred hhhhcccccccceEEECCccc---------ccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccC
Confidence 999999999999999999985 89999999999999999999999999999999999999999999999999
Q ss_pred CcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 452 KSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|.|++||+.+|+++..+.++. .|+++.|+.||.+||+|+.|.+|.|||+.
T Consensus 599 ~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLasgg~DnsV~lWD~~ 649 (707)
T KOG0263|consen 599 GLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLASGGADNSVRLWDLT 649 (707)
T ss_pred CcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEecCCCCeEEEEEch
Confidence 999999999999998887654 58999999999999999999999999986
No 25
>KOG0291 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=1.3e-36 Score=293.28 Aligned_cols=325 Identities=24% Similarity=0.453 Sum_probs=275.7
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
|..-...|+|++|++.-++||+|=..|...+|.+.+... +..+. ....+|..++|+..|.+++
T Consensus 261 ln~~~~kvtaa~fH~~t~~lvvgFssG~f~LyelP~f~l-------------ih~LS----is~~~I~t~~~N~tGDWiA 323 (893)
T KOG0291|consen 261 LNQNSSKVTAAAFHKGTNLLVVGFSSGEFGLYELPDFNL-------------IHSLS----ISDQKILTVSFNSTGDWIA 323 (893)
T ss_pred ecccccceeeeeccCCceEEEEEecCCeeEEEecCCceE-------------EEEee----cccceeeEEEecccCCEEE
Confidence 333447799999999999999999999999999875421 11111 1235799999999999999
Q ss_pred EEECC-CcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC-C
Q 010759 230 TGSYD-GQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-N 306 (502)
Q Consensus 230 sg~~d-g~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~ 306 (502)
.|+.. |++.||+...+ .+...++|...+++++++|+|+++++|+.||.|+|||.+.+-|..+|.-|...+..+.|. .
T Consensus 324 ~g~~klgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~ 403 (893)
T KOG0291|consen 324 FGCSKLGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTAR 403 (893)
T ss_pred EcCCccceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcEEEEeccCceEEEEeccCCCceEEEEEEec
Confidence 98765 89999997654 345668999999999999999999999999999999999999999999999999999996 4
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCC-cEEEEeCCCCceeeecccCCCcEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
+..+++++.||+|+.||+...+..++|.... -...|++..|.|.++..|+.|. .|.+|++++|+.+-.+.+|.++|.+
T Consensus 404 g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqllDiLsGHEgPVs~ 483 (893)
T KOG0291|consen 404 GNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLLDILSGHEGPVSG 483 (893)
T ss_pred CCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeeeehhcCCCCccee
Confidence 5667788999999999998888888877543 3578999999999999998886 5999999999999999999999999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
+.|+|.+. .|+|||+|.+||+||+-... .+.++. +..-+++++|+|+|+-||++.-||.|.+||...+.
T Consensus 484 l~f~~~~~---------~LaS~SWDkTVRiW~if~s~~~vEtl~-i~sdvl~vsfrPdG~elaVaTldgqItf~d~~~~~ 553 (893)
T KOG0291|consen 484 LSFSPDGS---------LLASGSWDKTVRIWDIFSSSGTVETLE-IRSDVLAVSFRPDGKELAVATLDGQITFFDIKEAV 553 (893)
T ss_pred eEEccccC---------eEEeccccceEEEEEeeccCceeeeEe-eccceeEEEEcCCCCeEEEEEecceEEEEEhhhce
Confidence 99999997 79999999999999986543 333444 66679999999999999999999999999998876
Q ss_pred eEEEEecC---------------------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 IVKTYTGN---------------------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ~~~~~~~~---------------------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+.++.+. .....+++|+||+.|.+|+....|++|+++
T Consensus 554 q~~~IdgrkD~~~gR~~~D~~ta~~sa~~K~Ftti~ySaDG~~IlAgG~sn~iCiY~v~ 612 (893)
T KOG0291|consen 554 QVGSIDGRKDLSGGRKETDRITAENSAKGKTFTTICYSADGKCILAGGESNSICIYDVP 612 (893)
T ss_pred eeccccchhhccccccccceeehhhcccCCceEEEEEcCCCCEEEecCCcccEEEEECc
Confidence 65444321 236789999999999999999999999975
No 26
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=3.3e-37 Score=267.97 Aligned_cols=279 Identities=24% Similarity=0.426 Sum_probs=247.6
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCce--eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~--~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
.+|.+.|+.+.|+|+|.+|+|||.|..|.+|++.+.+ ...+.+|+++|..+.|.++++.++++|.|++|+.||+++++
T Consensus 44 ~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdceN~~~lkgHsgAVM~l~~~~d~s~i~S~gtDk~v~~wD~~tG~ 123 (338)
T KOG0265|consen 44 PGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCENFWVLKGHSGAVMELHGMRDGSHILSCGTDKTVRGWDAETGK 123 (338)
T ss_pred CCCcceEEEEEECCCCCeEeecCCcceEEEEeccccccceeeeccccceeEeeeeccCCCEEEEecCCceEEEEecccce
Confidence 4567889999999999999999999999999976643 45788999999999999999999999999999999999999
Q ss_pred eeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 288 WKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
....+..|...+..+... +...+.+++.|+++++||++...+++++. ....++++.|..++..+.+|+-|+.|++||
T Consensus 124 ~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~-~kyqltAv~f~d~s~qv~sggIdn~ikvWd 202 (338)
T KOG0265|consen 124 RIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFE-NKYQLTAVGFKDTSDQVISGGIDNDIKVWD 202 (338)
T ss_pred eeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhccc-cceeEEEEEecccccceeeccccCceeeec
Confidence 999999999988888753 33455678999999999999888887764 345789999999999999999999999999
Q ss_pred CCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC----CeEEEEeeCCCC----CEEEEE
Q 010759 366 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL----GKLLYSLNGHRE----PVYSLA 437 (502)
Q Consensus 366 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~----~~~~~~~~~h~~----~v~~l~ 437 (502)
++.....+.+.+|..+|+.+..+|.|. ++.+-+.|.++++||++- .+++..+.+|.. .....+
T Consensus 203 ~r~~d~~~~lsGh~DtIt~lsls~~gs---------~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~hnfeknlL~cs 273 (338)
T KOG0265|consen 203 LRKNDGLYTLSGHADTITGLSLSRYGS---------FLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHIHNFEKNLLKCS 273 (338)
T ss_pred cccCcceEEeecccCceeeEEeccCCC---------ccccccccceEEEEEecccCCCCceEEEeecchhhhhhhcceee
Confidence 999999999999999999999999997 788999999999999873 355777776542 345679
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
|||+++++.+|+.|..+++||......+..++++ +.|++++|+|.-.+|.+|+.|.+|++=
T Consensus 274 wsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~lg 335 (338)
T KOG0265|consen 274 WSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIYLG 335 (338)
T ss_pred ccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeEee
Confidence 9999999999999999999999988888888876 458999999999999999999999763
No 27
>KOG0265 consensus U5 snRNP-specific protein-like factor and related proteins [RNA processing and modification]
Probab=100.00 E-value=1.9e-37 Score=269.53 Aligned_cols=285 Identities=27% Similarity=0.457 Sum_probs=242.1
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+..+.||.+.|+.+.|+|+|.+|||||.|..|.+|++..... +...+ .+|+++|..+.|.+|++
T Consensus 40 ~m~l~gh~geI~~~~F~P~gs~~aSgG~Dr~I~LWnv~gdce---------N~~~l-------kgHsgAVM~l~~~~d~s 103 (338)
T KOG0265|consen 40 IMLLPGHKGEIYTIKFHPDGSCFASGGSDRAIVLWNVYGDCE---------NFWVL-------KGHSGAVMELHGMRDGS 103 (338)
T ss_pred hhhcCCCcceEEEEEECCCCCeEeecCCcceEEEEecccccc---------ceeee-------ccccceeEeeeeccCCC
Confidence 456889999999999999999999999999999999765432 22222 25789999999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
.++++|.|.+++.||.+ ++....+.+|.+-|.++.-+.-|. .+.||+.|+++++||+++.+.++++.. ..++.++.|
T Consensus 104 ~i~S~gtDk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~~~~t~~~-kyqltAv~f 182 (338)
T KOG0265|consen 104 HILSCGTDKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKEAIKTFEN-KYQLTAVGF 182 (338)
T ss_pred EEEEecCCceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccchhhcccc-ceeEEEEEe
Confidence 99999999999999986 456667889999999887555554 466899999999999998887766532 335677888
Q ss_pred CC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC----ceeeecccCC
Q 010759 305 RN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD----KYVHDLREHS 379 (502)
Q Consensus 305 ~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~~~ 379 (502)
.+ .....+++-|+.|.+|+++.+....++.||...|+.+..+|+|.++.+-+.|.++++||++.. +++..+.+|.
T Consensus 183 ~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~rp~~p~~R~v~if~g~~ 262 (338)
T KOG0265|consen 183 KDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVRPFAPSQRCVKIFQGHI 262 (338)
T ss_pred cccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEecccCCCCceEEEeecch
Confidence 54 456788999999999999999999999999999999999999999999999999999998743 4455555543
Q ss_pred ----CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 380 ----KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 380 ----~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
.....++|+|++. .+..|+.|..+++||......++.+.||.+.|+++.|+|...+|.+++.|.+|+
T Consensus 263 hnfeknlL~cswsp~~~---------~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~iils~~sdk~i~ 333 (338)
T KOG0265|consen 263 HNFEKNLLKCSWSPNGT---------KITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPIILSCSSDKTIY 333 (338)
T ss_pred hhhhhhcceeeccCCCC---------ccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcEEEEeccCceeE
Confidence 2345678999986 578899999999999999999999999999999999999999999999999998
Q ss_pred EE
Q 010759 456 IW 457 (502)
Q Consensus 456 iw 457 (502)
+=
T Consensus 334 lg 335 (338)
T KOG0265|consen 334 LG 335 (338)
T ss_pred ee
Confidence 74
No 28
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=3.1e-36 Score=323.03 Aligned_cols=289 Identities=21% Similarity=0.412 Sum_probs=232.6
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLL 228 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l 228 (502)
+.+|...|++++|+|+|++|||||.|++|+||++............+ .... .+...|.+++|++ ++.+|
T Consensus 479 ~~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~-----~~~~-----~~~~~v~~l~~~~~~~~~l 548 (793)
T PLN00181 479 LLNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYP-----VVEL-----ASRSKLSGICWNSYIKSQV 548 (793)
T ss_pred ccCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccc-----eEEe-----cccCceeeEEeccCCCCEE
Confidence 34599999999999999999999999999999975421110000000 0011 1235689999987 57899
Q ss_pred EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 229 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
++++.||+|++||... .....+.+|.+.|++++|+| ++.+|++|+.|++|++||++++.....+
T Consensus 549 as~~~Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~-------------- 614 (793)
T PLN00181 549 ASSNFEGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTI-------------- 614 (793)
T ss_pred EEEeCCCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEE--------------
Confidence 9999999999999864 55667889999999999997 7889999999999999999876533221
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCc-eeeecccCCCcEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYT 384 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~i~~ 384 (502)
..+ ..+.++.|+ +++.+|++|+.||.|++||++..+ .+..+.+|...|.+
T Consensus 615 ---------------------------~~~-~~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~ 666 (793)
T PLN00181 615 ---------------------------KTK-ANICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSY 666 (793)
T ss_pred ---------------------------ecC-CCeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEE
Confidence 112 357788885 579999999999999999998765 46677889999999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC------CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL------GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~------~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
+.|.+ +. +|++++.|++|+|||+.. ..++..+.+|...+++++|+|++.+||+|+.|+.|++|+
T Consensus 667 v~f~~-~~---------~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~ 736 (793)
T PLN00181 667 VRFVD-SS---------TLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYH 736 (793)
T ss_pred EEEeC-CC---------EEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEE
Confidence 99963 32 689999999999999974 357788999999999999999999999999999999999
Q ss_pred CCCCeeEEEEe--------------cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 459 LKEGKIVKTYT--------------GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 459 ~~~~~~~~~~~--------------~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
......+..+. +...|.+++|+|+|..|++|+.+|.|.||++
T Consensus 737 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~V~~v~ws~~~~~lva~~~dG~I~i~~~ 792 (793)
T PLN00181 737 KAFPMPVLSYKFKTIDPVSGLEVDDASQFISSVCWRGQSSTLVAANSTGNIKILEM 792 (793)
T ss_pred CCCCCceEEEecccCCcccccccCCCCcEEEEEEEcCCCCeEEEecCCCcEEEEec
Confidence 87654443321 1234899999999999999999999999986
No 29
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=3.1e-36 Score=284.35 Aligned_cols=285 Identities=36% Similarity=0.624 Sum_probs=251.3
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..+++|..+|++++|+|++++|++++.||.+++|++.++.. .... ..+...+..+.|++++++
T Consensus 3 ~~~~~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~-------------~~~~----~~~~~~i~~~~~~~~~~~ 65 (289)
T cd00200 3 RTLKGHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGEL-------------LRTL----KGHTGPVRDVAASADGTY 65 (289)
T ss_pred hHhcccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCc-------------EEEE----ecCCcceeEEEECCCCCE
Confidence 45779999999999999999999999999999999875431 1111 234567889999999999
Q ss_pred EEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 228 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+++++.+|.|++|+... .....+..|...|.++.|+|++.++++++.|+.|++||+.+++....+..|...+.++.|.+
T Consensus 66 l~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 145 (289)
T cd00200 66 LASGSSDKTIRLWDLETGECVRTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSP 145 (289)
T ss_pred EEEEcCCCeEEEEEcCcccceEEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcC
Confidence 99999999999999875 45667788999999999999988888888899999999998888888888888899999977
Q ss_pred CceE-EEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 307 NVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 307 ~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
...+ ++++.++.+++|++...+++..+..|...+.+++|+|+++.+++++.|+.|++||++.++.+..+..|...+.++
T Consensus 146 ~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~ 225 (289)
T cd00200 146 DGTFVASSSQDGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSV 225 (289)
T ss_pred cCCEEEEEcCCCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCceecchhhcCCceEEE
Confidence 5444 455559999999999888888899999999999999999999999999999999999988888888888899999
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.|+|++. ++++++.||.|++||+.+++.+..+.+|...|.+++|+|++++|++++.||.|++|+
T Consensus 226 ~~~~~~~---------~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 226 AFSPDGY---------LLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred EEcCCCc---------EEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 9999854 677787899999999999999999999999999999999999999999999999996
No 30
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=6.6e-37 Score=305.90 Aligned_cols=289 Identities=28% Similarity=0.532 Sum_probs=249.0
Q ss_pred eeecccc-ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGH-TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H-~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
...+.+| ...|.++.|||+|++|++++.|+.+++|+...... .......+|...|.+++|+|++
T Consensus 151 ~~~~~~~~~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~---------------~~~~~l~~h~~~v~~~~fs~d~ 215 (456)
T KOG0266|consen 151 EQTLAGHECPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKS---------------NLLRELSGHTRGVSDVAFSPDG 215 (456)
T ss_pred eeeecccccCceEEEEEcCCCCeEEEccCCCcEEEeecccccc---------------hhhccccccccceeeeEECCCC
Confidence 4455554 88999999999999999999999999999854431 0011124567789999999999
Q ss_pred CEEEEEECCCcEEEEEC-CC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 226 TLLATGSYDGQARIWST-NG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~-~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+++++|+.|++|+||+. .. ....++.+|...|++++|+|+++.+++|+.|++|+|||++++++
T Consensus 216 ~~l~s~s~D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~--------------- 280 (456)
T KOG0266|consen 216 SYLLSGSDDKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGEC--------------- 280 (456)
T ss_pred cEEEEecCCceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCCeE---------------
Confidence 99999999999999998 33 46678999999999999999999999999999999999987654
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecccCCCc
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--YVHDLREHSKE 381 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~~~~~ 381 (502)
+..+.+|...|++++|++++++|++++.|+.|+|||+.++. ++..+..+...
T Consensus 281 --------------------------~~~l~~hs~~is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~ 334 (456)
T KOG0266|consen 281 --------------------------VRKLKGHSDGISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENS 334 (456)
T ss_pred --------------------------EEeeeccCCceEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCC
Confidence 34567888899999999999999999999999999999998 56666665554
Q ss_pred --EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCC---EEEEEECCCCCEEEEEeCCCcEEE
Q 010759 382 --IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREP---VYSLAFSPTGEYLASGSLDKSMHI 456 (502)
Q Consensus 382 --i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~---v~~l~~spdg~~lasgs~Dg~i~i 456 (502)
++.++|+|++. ++++++.|+.+++||+..+.++..+.+|... +.+..+++.+.++++|+.|+.|++
T Consensus 335 ~~~~~~~fsp~~~---------~ll~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~ 405 (456)
T KOG0266|consen 335 APVTSVQFSPNGK---------YLLSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYV 405 (456)
T ss_pred CceeEEEECCCCc---------EEEEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEE
Confidence 99999999987 8899999999999999999999999998764 444566789999999999999999
Q ss_pred EeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEE--CCCeEEEEEe
Q 010759 457 WSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACF--ANHTVCVLDF 500 (502)
Q Consensus 457 w~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~--~~~~v~v~~~ 500 (502)
|++.++..+..+.++ ..+..++|+|..+++++++ .|+.+.+|.-
T Consensus 406 ~~~~s~~~~~~l~~h~~~~~~~~~~~~~~~~~~s~s~~~d~~~~~w~~ 453 (456)
T KOG0266|consen 406 WDSSSGGILQRLEGHSKAAVSDLSSHPTENLIASSSFEGDGLIRLWKY 453 (456)
T ss_pred EeCCccchhhhhcCCCCCceeccccCCCcCeeeecCcCCCceEEEecC
Confidence 999998888888877 5688999999999999998 6888888853
No 31
>KOG0273 consensus Beta-transducin family (WD-40 repeat) protein [Chromatin structure and dynamics]
Probab=100.00 E-value=2e-36 Score=277.70 Aligned_cols=277 Identities=29% Similarity=0.592 Sum_probs=248.7
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..|++++|+.+|.+||+|+.||.++||+..... ......|.+||.++.|+..|.||++++.|
T Consensus 236 kdVT~L~Wn~~G~~LatG~~~G~~riw~~~G~l------------------~~tl~~HkgPI~slKWnk~G~yilS~~vD 297 (524)
T KOG0273|consen 236 KDVTSLDWNNDGTLLATGSEDGEARIWNKDGNL------------------ISTLGQHKGPIFSLKWNKKGTYILSGGVD 297 (524)
T ss_pred CCcceEEecCCCCeEEEeecCcEEEEEecCchh------------------hhhhhccCCceEEEEEcCCCCEEEeccCC
Confidence 579999999999999999999999999975432 12234578999999999999999999999
Q ss_pred CcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEE
Q 010759 235 GQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFAT 312 (502)
Q Consensus 235 g~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 312 (502)
+++.+||.. +.....+.-|..+-..+.|-.+ ..|++++.|+.|+++-+.....+.++.+|.++|.++.|.+ ...+++
T Consensus 298 ~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~-~~F~ts~td~~i~V~kv~~~~P~~t~~GH~g~V~alk~n~tg~LLaS 376 (524)
T KOG0273|consen 298 GTTILWDAHTGTVKQQFEFHSAPALDVDWQSN-DEFATSSTDGCIHVCKVGEDRPVKTFIGHHGEVNALKWNPTGSLLAS 376 (524)
T ss_pred ccEEEEeccCceEEEeeeeccCCccceEEecC-ceEeecCCCceEEEEEecCCCcceeeecccCceEEEEECCCCceEEE
Confidence 999999974 5566678888888677888654 5799999999999999998889999999999999999975 456788
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC---------CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG---------SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~---------~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
+++|+++++|.......+..+.+|...|..+.|+|+| ..+++++.|++|++||+..+.+++.|..|..+|+
T Consensus 377 ~SdD~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l~sas~dstV~lwdv~~gv~i~~f~kH~~pVy 456 (524)
T KOG0273|consen 377 CSDDGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLMLASASFDSTVKLWDVESGVPIHTLMKHQEPVY 456 (524)
T ss_pred ecCCCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceEEEeecCCeEEEEEccCCceeEeeccCCCceE
Confidence 9999999999999988889999999999999999976 3699999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+++|+|+|. ++|+|+.||.|.||++++++.++.+.+. +.|..|+|+.+|.+|..+-.|+.+.+-|++
T Consensus 457 svafS~~g~---------ylAsGs~dg~V~iws~~~~~l~~s~~~~-~~Ifel~Wn~~G~kl~~~~sd~~vcvldlr 523 (524)
T KOG0273|consen 457 SVAFSPNGR---------YLASGSLDGCVHIWSTKTGKLVKSYQGT-GGIFELCWNAAGDKLGACASDGSVCVLDLR 523 (524)
T ss_pred EEEecCCCc---------EEEecCCCCeeEeccccchheeEeecCC-CeEEEEEEcCCCCEEEEEecCCCceEEEec
Confidence 999999997 8999999999999999999999988754 569999999999999999999999998875
No 32
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=100.00 E-value=7.4e-37 Score=280.09 Aligned_cols=295 Identities=26% Similarity=0.415 Sum_probs=237.1
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeeccc--ccCCCCeEEEEECCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT--NEKSKDVTTLDWNGE 224 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~V~~l~~s~~ 224 (502)
+..+..|..+|.||+++|+++++++++.|++|.-|++.++.........+ .+.......... ..|.+.|.+++.|+|
T Consensus 135 ~~~~~~H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~-ev~k~~~~~~k~~r~~h~keil~~avS~D 213 (479)
T KOG0299|consen 135 FRVIGKHQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERD-EVLKSHGNPLKESRKGHVKEILTLAVSSD 213 (479)
T ss_pred ceeeccccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccc-hhhhhccCCCCcccccccceeEEEEEcCC
Confidence 56788899999999999999999999999999999999887542211111 000000000011 267889999999999
Q ss_pred CCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 225 GTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
|+||++|+.|..|.||+... .....+.+|.++|.+++|....+.|+++|.|++|++|++....++.++..|+..+..++
T Consensus 214 gkylatgg~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Id 293 (479)
T KOG0299|consen 214 GKYLATGGRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGID 293 (479)
T ss_pred CcEEEecCCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeec
Confidence 99999999999999999865 44557899999999999999999999999999999999999999999999999999999
Q ss_pred cCCCceEEEE-cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc-C---
Q 010759 304 WRNNVSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE-H--- 378 (502)
Q Consensus 304 ~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-~--- 378 (502)
.....+.++. +.|.++++|++... ....|.+|.+.+.|++|-.+ ..|++||++|.|.+|++-+.+++.+.+. |
T Consensus 294 aL~reR~vtVGgrDrT~rlwKi~ee-sqlifrg~~~sidcv~~In~-~HfvsGSdnG~IaLWs~~KKkplf~~~~AHgv~ 371 (479)
T KOG0299|consen 294 ALSRERCVTVGGRDRTVRLWKIPEE-SQLIFRGGEGSIDCVAFIND-EHFVSGSDNGSIALWSLLKKKPLFTSRLAHGVI 371 (479)
T ss_pred hhcccceEEeccccceeEEEecccc-ceeeeeCCCCCeeeEEEecc-cceeeccCCceEEEeeecccCceeEeecccccc
Confidence 8776666655 59999999999543 34578899999999999854 5688999999999999999888776542 1
Q ss_pred --------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC----eEEEEeeCCCCCEEEEEECCCCCEEE
Q 010759 379 --------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----KLLYSLNGHREPVYSLAFSPTGEYLA 446 (502)
Q Consensus 379 --------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~spdg~~la 446 (502)
...|++++..|... ++|+||.+|.||+|-+..+ .+++.+. ..+.|++|+|+++|++|+
T Consensus 372 ~~~~~~~~~~Witsla~i~~sd---------L~asGS~~G~vrLW~i~~g~r~i~~l~~ls-~~GfVNsl~f~~sgk~iv 441 (479)
T KOG0299|consen 372 PELDPVNGNFWITSLAVIPGSD---------LLASGSWSGCVRLWKIEDGLRAINLLYSLS-LVGFVNSLAFSNSGKRIV 441 (479)
T ss_pred CCccccccccceeeeEecccCc---------eEEecCCCCceEEEEecCCccccceeeecc-cccEEEEEEEccCCCEEE
Confidence 12677888777654 8999999999999998876 4555655 567899999999999776
Q ss_pred EE-eCCCcE
Q 010759 447 SG-SLDKSM 454 (502)
Q Consensus 447 sg-s~Dg~i 454 (502)
+| +....+
T Consensus 442 agiGkEhRl 450 (479)
T KOG0299|consen 442 AGIGKEHRL 450 (479)
T ss_pred Eeccccccc
Confidence 65 434333
No 33
>KOG0296 consensus Angio-associated migratory cell protein (contains WD40 repeats) [Function unknown]
Probab=100.00 E-value=5.4e-36 Score=266.93 Aligned_cols=286 Identities=22% Similarity=0.378 Sum_probs=233.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...+.||+..|+++.||.||.+||||+.+|.|+||+..++.... .+. ..-..+--+.|+|.+.
T Consensus 99 ~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~~~----------~~~-------~e~~dieWl~WHp~a~ 161 (399)
T KOG0296|consen 99 AGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGEQW----------KLD-------QEVEDIEWLKWHPRAH 161 (399)
T ss_pred eeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCceEE----------Eee-------cccCceEEEEeccccc
Confidence 45688999999999999999999999999999999988764211 110 1235688899999999
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec-ccCeEEEec
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH-SGPTLDVDW 304 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~ 304 (502)
.|+.|+.||.+.+|.+.. .....+.+|+.++++-.|.|+|++++++..||+|++||+.++.....+... ..+...+.+
T Consensus 162 illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~~~e~~~~~~~~~ 241 (399)
T KOG0296|consen 162 ILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKITQAEGLELPCISL 241 (399)
T ss_pred EEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecCceEEEEecCCCceeEEecccccCcCCcccc
Confidence 999999999999999876 667789999999999999999999999999999999999999876655422 122333444
Q ss_pred CC-CceEEEEcCCCeEEEEEcCCCcceeeec--------CCCcceeEEE---EcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 305 RN-NVSFATSSTDNMIYVCKIGENRPIKTFA--------GHQGEVNCVK---WDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 305 ~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~--------~h~~~v~~v~---~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
.. ...++.++.++.+++.....++.+..+. .+...+.||. |+..-++.|+|+.||+|.|||+...++.
T Consensus 242 ~~~~~~~~~g~~e~~~~~~~~~sgKVv~~~n~~~~~l~~~~e~~~esve~~~~ss~lpL~A~G~vdG~i~iyD~a~~~~R 321 (399)
T KOG0296|consen 242 NLAGSTLTKGNSEGVACGVNNGSGKVVNCNNGTVPELKPSQEELDESVESIPSSSKLPLAACGSVDGTIAIYDLAASTLR 321 (399)
T ss_pred ccccceeEeccCCccEEEEccccceEEEecCCCCccccccchhhhhhhhhcccccccchhhcccccceEEEEecccchhh
Confidence 32 3345566777778777777776665554 3444455554 4556678999999999999999887766
Q ss_pred eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 373 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 373 ~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
+.+ .|...|..+.|-++. +|++++.+|.|++||.++|++++++.||..+|.+++++|++++++|+|.|+
T Consensus 322 ~~c-~he~~V~~l~w~~t~----------~l~t~c~~g~v~~wDaRtG~l~~~y~GH~~~Il~f~ls~~~~~vvT~s~D~ 390 (399)
T KOG0296|consen 322 HIC-EHEDGVTKLKWLNTD----------YLLTACANGKVRQWDARTGQLKFTYTGHQMGILDFALSPQKRLVVTVSDDN 390 (399)
T ss_pred eec-cCCCceEEEEEcCcc----------hheeeccCceEEeeeccccceEEEEecCchheeEEEEcCCCcEEEEecCCC
Confidence 554 477889999998832 788999999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCC
Q 010759 453 SMHIWSLK 460 (502)
Q Consensus 453 ~i~iw~~~ 460 (502)
+.+||++.
T Consensus 391 ~a~VF~v~ 398 (399)
T KOG0296|consen 391 TALVFEVP 398 (399)
T ss_pred eEEEEecC
Confidence 99999864
No 34
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=5.4e-38 Score=277.56 Aligned_cols=268 Identities=28% Similarity=0.523 Sum_probs=233.7
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
.++.|+|+.+. ...+++|..|++|+|||.+. .+...+.+|++.|.|+.|.. ..+++||+|.+|++||+++++.+.
T Consensus 196 ~skgVYClQYD--D~kiVSGlrDnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~--rviisGSSDsTvrvWDv~tge~l~ 271 (499)
T KOG0281|consen 196 NSKGVYCLQYD--DEKIVSGLRDNTIKIWDKNSLECLKILTGHTGSVLCLQYDE--RVIVSGSSDSTVRVWDVNTGEPLN 271 (499)
T ss_pred cCCceEEEEec--chhhhcccccCceEEeccccHHHHHhhhcCCCcEEeeeccc--eEEEecCCCceEEEEeccCCchhh
Confidence 46789999885 45789999999999999875 45567899999999999864 489999999999999999999999
Q ss_pred EeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc---eeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 291 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP---IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
++..|...++.+.|.++ .+++++.|.++.+|++..+.. ...+.||...|+.+.|+ .++++++|.|.+|++|++.
T Consensus 272 tlihHceaVLhlrf~ng-~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd--~kyIVsASgDRTikvW~~s 348 (499)
T KOG0281|consen 272 TLIHHCEAVLHLRFSNG-YMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD--DKYIVSASGDRTIKVWSTS 348 (499)
T ss_pred HHhhhcceeEEEEEeCC-EEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccc--cceEEEecCCceEEEEecc
Confidence 99999999999988655 578999999999999987653 34678999999999995 5699999999999999999
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
+..++.++.+|...|.|+.+. + .++++||.|.+||+||+..|.++..+.||..-|.+|.|. .+.+++
T Consensus 349 t~efvRtl~gHkRGIAClQYr--~---------rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd--~krIVS 415 (499)
T KOG0281|consen 349 TCEFVRTLNGHKRGIACLQYR--D---------RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD--NKRIVS 415 (499)
T ss_pred ceeeehhhhcccccceehhcc--C---------eEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec--Cceeee
Confidence 999999999999999998863 2 278999999999999999999999999999999999994 678999
Q ss_pred EeCCCcEEEEeCCCCeeE---------EEE-ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 448 GSLDKSMHIWSLKEGKIV---------KTY-TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~---------~~~-~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+.||.|+|||+..+.-. .++ .+.+.|+.++| |.-.+++++.|.+|-||||-
T Consensus 416 GaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdFl 477 (499)
T KOG0281|consen 416 GAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDFL 477 (499)
T ss_pred ccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEcC
Confidence 999999999999876432 122 23457999988 45689999999999999983
No 35
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=100.00 E-value=5.3e-35 Score=275.92 Aligned_cols=280 Identities=36% Similarity=0.626 Sum_probs=251.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
.|..+|.+++|+|++++|++++.||.+++|+... .....+..|...+..+.|+|++++|++++.|+.|++||+.+++..
T Consensus 7 ~h~~~i~~~~~~~~~~~l~~~~~~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~~~~~~~~~ 86 (289)
T cd00200 7 GHTGGVTCVAFSPDGKLLATGSGDGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIRLWDLETGECV 86 (289)
T ss_pred ccCCCEEEEEEcCCCCEEEEeecCcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEEEEEcCcccce
Confidence 4568899999999999999999999999999864 355667889999999999999999999999999999999988888
Q ss_pred EEeeecccCeEEEecCCCc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
..+..|...+.++.|..+. .+++++.++.+++|++...+++..+..|...+.+++|+|++.++++++.|+.|++||+++
T Consensus 87 ~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~ 166 (289)
T cd00200 87 RTLTGHTSYVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASSSQDGTIKLWDLRT 166 (289)
T ss_pred EEEeccCCcEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEEcCCCcEEEEEccc
Confidence 8888888889999987654 445555699999999998888888889999999999999999999998899999999998
Q ss_pred CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 369 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
++.+..+..|...+.++.|+|++. .+++++.+|.|++||+..++.+..+..|..+|.+++|+|++.+++++
T Consensus 167 ~~~~~~~~~~~~~i~~~~~~~~~~---------~l~~~~~~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 237 (289)
T cd00200 167 GKCVATLTGHTGEVNSVAFSPDGE---------KLLSSSSDGTIKLWDLSTGKCLGTLRGHENGVNSVAFSPDGYLLASG 237 (289)
T ss_pred cccceeEecCccccceEEECCCcC---------EEEEecCCCcEEEEECCCCceecchhhcCCceEEEEEcCCCcEEEEE
Confidence 888888888888999999999885 56777789999999999999998888899999999999999999999
Q ss_pred eCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 449 SLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 449 s~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+.||.|++|++.+++.+..+..+ ..+.+++|+|++++|++++.|+.|.||+
T Consensus 238 ~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~iw~ 289 (289)
T cd00200 238 SEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSADGTIRIWD 289 (289)
T ss_pred cCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCCCeEEecC
Confidence 99999999999988888877654 4699999999999999999999999996
No 36
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-36 Score=275.02 Aligned_cols=301 Identities=26% Similarity=0.378 Sum_probs=239.7
Q ss_pred ccccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEE
Q 010759 139 SFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 218 (502)
Q Consensus 139 ~~~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 218 (502)
...+|.....+|..|+.+|.-+.||++|+||||||.|.++.||.+..... +. +.....+|..+|..
T Consensus 209 ~~qip~qt~qil~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~----------~k----l~~tlvgh~~~V~y 274 (519)
T KOG0293|consen 209 RLQIPSQTWQILQDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVH----------FK----LKKTLVGHSQPVSY 274 (519)
T ss_pred cccCCchhhhhHhhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcc----------ee----eeeeeecccCceEE
Confidence 34578888889999999999999999999999999999999999754321 11 12233457889999
Q ss_pred EEECCCCCEEEEEECCCcEEEEECCCceeEee--cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 219 LDWNGEGTLLATGSYDGQARIWSTNGDLKCTL--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 219 l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~--~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+.||||.++|++++.+..+++||......... .+|...+.+++|.|+|..|++|+.|+++..||+.... ...+.+..
T Consensus 275 i~wSPDdryLlaCg~~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr 353 (519)
T KOG0293|consen 275 IMWSPDDRYLLACGFDEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVR 353 (519)
T ss_pred EEECCCCCeEEecCchHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccc
Confidence 99999999999999999999999875433322 3356889999999999999999999999999986543 33333322
Q ss_pred -cCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 297 -GPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 297 -~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
..+.++... ++..+++...|..|++++......+... .-..+|++++.|.+++++++.-.+..+++||+...+.+..
T Consensus 354 ~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~li-se~~~its~~iS~d~k~~LvnL~~qei~LWDl~e~~lv~k 432 (519)
T KOG0293|consen 354 DPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLI-SEEQPITSFSISKDGKLALVNLQDQEIHLWDLEENKLVRK 432 (519)
T ss_pred cceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccc-cccCceeEEEEcCCCcEEEEEcccCeeEEeecchhhHHHH
Confidence 335555543 3445556668888999887654443222 2345799999999999999999999999999998888999
Q ss_pred cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCc
Q 010759 375 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKS 453 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~ 453 (502)
+.+|...-+-|.-+-.|. ...+++|||.|+.|+||+..+++++.++.||...|++++|+|.. .++|+||+||+
T Consensus 433 Y~Ghkq~~fiIrSCFgg~------~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgt 506 (519)
T KOG0293|consen 433 YFGHKQGHFIIRSCFGGG------NDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGT 506 (519)
T ss_pred hhcccccceEEEeccCCC------CcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCe
Confidence 989887666554333332 22489999999999999999999999999999999999999975 67899999999
Q ss_pred EEEEeCCC
Q 010759 454 MHIWSLKE 461 (502)
Q Consensus 454 i~iw~~~~ 461 (502)
|+||-...
T Consensus 507 IRIWg~~~ 514 (519)
T KOG0293|consen 507 IRIWGPSD 514 (519)
T ss_pred EEEecCCc
Confidence 99998753
No 37
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.8e-36 Score=286.63 Aligned_cols=285 Identities=27% Similarity=0.388 Sum_probs=253.2
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
.+..|+..|-++.|||...+++++=..|.|.||+..+..... .+. -..-||.+..|-+.-+++
T Consensus 8 k~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVk-------------sfe----V~~~PvRa~kfiaRknWi 70 (794)
T KOG0276|consen 8 KFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVK-------------SFE----VSEVPVRAAKFIARKNWI 70 (794)
T ss_pred HhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeee-------------eee----ecccchhhheeeeccceE
Confidence 455689999999999999999999999999999988754322 111 123578888999999999
Q ss_pred EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC
Q 010759 229 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 307 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
++|+.|..||||+.+. +.+..|..|..-|.+++.||...+++|+|.|-+|++||...+ |
T Consensus 71 v~GsDD~~IrVfnynt~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~-w------------------- 130 (794)
T KOG0276|consen 71 VTGSDDMQIRVFNYNTGEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENE-W------------------- 130 (794)
T ss_pred EEecCCceEEEEecccceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCc-e-------------------
Confidence 9999999999999874 667789999999999999999999999999999999997542 1
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
.+.++|.||...|.+++|+| |.+.+||++.|++|+||.+.+..+..++.+|...|.++.
T Consensus 131 --------------------a~~qtfeGH~HyVMqv~fnPkD~ntFaS~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vd 190 (794)
T KOG0276|consen 131 --------------------ACEQTFEGHEHYVMQVAFNPKDPNTFASASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVD 190 (794)
T ss_pred --------------------eeeeEEcCcceEEEEEEecCCCccceeeeeccccEEEEEcCCCCCceeeeccccCcceEE
Confidence 23468899999999999999 467899999999999999999999999999999999999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
|-+.|. +.+|+||+.|.+|+|||.++..|+.++.||...|..+.|+|.=..++|||.||+|+||+..+.++..
T Consensus 191 yy~~gd-------kpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~ 263 (794)
T KOG0276|consen 191 YYTGGD-------KPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEK 263 (794)
T ss_pred eccCCC-------cceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCcEEEEecCCccEEEecCcceehhh
Confidence 998774 3489999999999999999999999999999999999999999999999999999999999999888
Q ss_pred EEe-cCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 467 TYT-GNGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 467 ~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
++. +-+.+++++-.+.+..+|.|+.+|.|.|
T Consensus 264 tLn~gleRvW~I~~~k~~~~i~vG~Deg~i~v 295 (794)
T KOG0276|consen 264 TLNYGLERVWCIAAHKGDGKIAVGFDEGSVTV 295 (794)
T ss_pred hhhcCCceEEEEeecCCCCeEEEeccCCcEEE
Confidence 774 4567999999999999999999998755
No 38
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=100.00 E-value=1.1e-34 Score=245.80 Aligned_cols=265 Identities=20% Similarity=0.365 Sum_probs=227.2
Q ss_pred CEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc--eeEEeeecccCeEEE
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDV 302 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~ 302 (502)
-+|+|+|+|.+||+|... |.+..++....+.|..|...|++..|++++. ..||+||++++. .+.+|..|...|..+
T Consensus 11 viLvsA~YDhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~-qhvRlyD~~S~np~Pv~t~e~h~kNVtaV 89 (311)
T KOG0315|consen 11 VILVSAGYDHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGN-QHVRLYDLNSNNPNPVATFEGHTKNVTAV 89 (311)
T ss_pred eEEEeccCcceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccC-CeeEEEEccCCCCCceeEEeccCCceEEE
Confidence 479999999999999975 4555667766788999999999998888765 679999998875 577899999999999
Q ss_pred ecCCCc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc-cCCC
Q 010759 303 DWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSK 380 (502)
Q Consensus 303 ~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~~~~ 380 (502)
.|..+. -..+++.||++++|+++.....+.| .|.++|+++..+|+...|++|..+|.|++||+....+.+.+. ....
T Consensus 90 gF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~-~~~spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~ 168 (311)
T KOG0315|consen 90 GFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNY-QHNSPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDT 168 (311)
T ss_pred EEeecCeEEEecCCCceEEEEeccCcccchhc-cCCCCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCc
Confidence 997554 5578999999999999986554444 477999999999999999999999999999999887665554 3456
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i 454 (502)
.|.++...|+|+ +|+.+..-|+.++|++-+. .++..+..|.+.|..+.||||++|||++|.|.++
T Consensus 169 ~i~sl~v~~dgs---------ml~a~nnkG~cyvW~l~~~~~~s~l~P~~k~~ah~~~il~C~lSPd~k~lat~ssdktv 239 (311)
T KOG0315|consen 169 SIQSLTVMPDGS---------MLAAANNKGNCYVWRLLNHQTASELEPVHKFQAHNGHILRCLLSPDVKYLATCSSDKTV 239 (311)
T ss_pred ceeeEEEcCCCc---------EEEEecCCccEEEEEccCCCccccceEhhheecccceEEEEEECCCCcEEEeecCCceE
Confidence 789999999997 7888889999999998654 3566788999999999999999999999999999
Q ss_pred EEEeCCCC-eeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 455 HIWSLKEG-KIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 455 ~iw~~~~~-~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+||++.+. ++...++++ ..+++++||.||.+|++|+.|+.+++|++.
T Consensus 240 ~iwn~~~~~kle~~l~gh~rWvWdc~FS~dg~YlvTassd~~~rlW~~~ 288 (311)
T KOG0315|consen 240 KIWNTDDFFKLELVLTGHQRWVWDCAFSADGEYLVTASSDHTARLWDLS 288 (311)
T ss_pred EEEecCCceeeEEEeecCCceEEeeeeccCccEEEecCCCCceeecccc
Confidence 99999987 555666664 469999999999999999999999999874
No 39
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.3e-35 Score=246.34 Aligned_cols=290 Identities=19% Similarity=0.323 Sum_probs=244.0
Q ss_pred ccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE
Q 010759 141 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 220 (502)
Q Consensus 141 ~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 220 (502)
++|.....+|.+|+++|.++.|+-||+|.+|+|.|.+||+|+...+.. ++. +.+|...|..++
T Consensus 4 e~ptkr~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~l-------------ikt----YsghG~EVlD~~ 66 (307)
T KOG0316|consen 4 ELPTKRLSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGAL-------------IKT----YSGHGHEVLDAA 66 (307)
T ss_pred cCcchhceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccce-------------eee----ecCCCceeeecc
Confidence 467777789999999999999999999999999999999999765532 233 344567899999
Q ss_pred ECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc--ceeEEeeeccc
Q 010759 221 WNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--EWKQQFEFHSG 297 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~--~~~~~~~~~~~ 297 (502)
.+.|...|++|+.|..|.+||++ ++....+.+|.+.|..++|+.+...+++||.|.++++||-++. +.++.+.....
T Consensus 67 ~s~Dnskf~s~GgDk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D 146 (307)
T KOG0316|consen 67 LSSDNSKFASCGGDKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKD 146 (307)
T ss_pred ccccccccccCCCCceEEEEEcccCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcC
Confidence 99999999999999999999987 5667789999999999999999999999999999999998764 45666666666
Q ss_pred CeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 298 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
.+.+++.. ...+++++.||+++.++++.+.....+.|| +|+|++|+++++..+.++.|+++++.|-.+++++..+++
T Consensus 147 ~V~Si~v~-~heIvaGS~DGtvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkG 223 (307)
T KOG0316|consen 147 GVSSIDVA-EHEIVAGSVDGTVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKG 223 (307)
T ss_pred ceeEEEec-ccEEEeeccCCcEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcc
Confidence 67777654 345788999999999999988876666554 799999999999999999999999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCC-EEEEEECCCCCEEEEEeCCCcEEE
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREP-VYSLAFSPTGEYLASGSLDKSMHI 456 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spdg~~lasgs~Dg~i~i 456 (502)
|...-+.+..+-..+ ...+++||.||.|.+||+.....+..+..+... |++|+++|.-.-|.++.. +.+.+
T Consensus 224 hkn~eykldc~l~qs-------dthV~sgSEDG~Vy~wdLvd~~~~sk~~~~~~v~v~dl~~hp~~~~f~~A~~-~~~~~ 295 (307)
T KOG0316|consen 224 HKNMEYKLDCCLNQS-------DTHVFSGSEDGKVYFWDLVDETQISKLSVVSTVIVTDLSCHPTMDDFITATG-HGDLF 295 (307)
T ss_pred cccceeeeeeeeccc-------ceeEEeccCCceEEEEEeccceeeeeeccCCceeEEeeecccCccceeEecC-Cceec
Confidence 988777665443332 136899999999999999999999999888877 899999998766666653 34556
Q ss_pred Ee
Q 010759 457 WS 458 (502)
Q Consensus 457 w~ 458 (502)
|-
T Consensus 296 ~~ 297 (307)
T KOG0316|consen 296 WY 297 (307)
T ss_pred ee
Confidence 64
No 40
>KOG0316 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.6e-35 Score=246.17 Aligned_cols=241 Identities=24% Similarity=0.464 Sum_probs=219.9
Q ss_pred eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec-CCCceEEEEcCCCeEEEEEcC
Q 010759 247 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIG 325 (502)
Q Consensus 247 ~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~ 325 (502)
...+.+|.++|..++|+-+|+|.++|+.|++|++|++..+.++++|..|...+.++.. .++..|++++.|..+.+||+.
T Consensus 10 ~~~l~~~qgaV~avryN~dGnY~ltcGsdrtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~vwDV~ 89 (307)
T KOG0316|consen 10 LSILDCAQGAVRAVRYNVDGNYCLTCGSDRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQVWDVN 89 (307)
T ss_pred ceeecccccceEEEEEccCCCEEEEcCCCceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEEEEEcc
Confidence 4467889999999999999999999999999999999999999999999999998876 467889999999999999999
Q ss_pred CCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 326 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 326 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~--~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
+++.++.|.||.+.|+.++|+.+...+++|+.|.++++||.++. ++++.+......|.++..+.. .+
T Consensus 90 TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~h-----------eI 158 (307)
T KOG0316|consen 90 TGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEH-----------EI 158 (307)
T ss_pred cCeeeeecccccceeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEeccc-----------EE
Confidence 99999999999999999999999999999999999999998764 567777777778888887543 57
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE---EEEEEC
Q 010759 404 ASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI---FEVCWN 480 (502)
Q Consensus 404 ~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i---~~~~ws 480 (502)
++||.||++|.||++.|+.....-+| ||++++||+||+.+..++.|++|++.|-.+|++++.|.++... ..++++
T Consensus 159 vaGS~DGtvRtydiR~G~l~sDy~g~--pit~vs~s~d~nc~La~~l~stlrLlDk~tGklL~sYkGhkn~eykldc~l~ 236 (307)
T KOG0316|consen 159 VAGSVDGTVRTYDIRKGTLSSDYFGH--PITSVSFSKDGNCSLASSLDSTLRLLDKETGKLLKSYKGHKNMEYKLDCCLN 236 (307)
T ss_pred EeeccCCcEEEEEeecceeehhhcCC--cceeEEecCCCCEEEEeeccceeeecccchhHHHHHhcccccceeeeeeeec
Confidence 89999999999999999987766665 8999999999999999999999999999999999999886542 578899
Q ss_pred CCCCEEEEEECCCeEEEEEe
Q 010759 481 KEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 481 ~~g~~la~~~~~~~v~v~~~ 500 (502)
....++++|+.||.|++||+
T Consensus 237 qsdthV~sgSEDG~Vy~wdL 256 (307)
T KOG0316|consen 237 QSDTHVFSGSEDGKVYFWDL 256 (307)
T ss_pred ccceeEEeccCCceEEEEEe
Confidence 99999999999999999997
No 41
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=100.00 E-value=4.4e-36 Score=271.32 Aligned_cols=289 Identities=22% Similarity=0.402 Sum_probs=240.9
Q ss_pred ccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE
Q 010759 141 EIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 220 (502)
Q Consensus 141 ~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 220 (502)
.+|......+..|.+.|+.+.|-++...|+|||.|..|++|++...+.. ..+...+..++|+.++
T Consensus 162 ~lpS~~~~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~---------------~~~tLaGs~g~it~~d 226 (459)
T KOG0288|consen 162 TLPSRALFVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSE---------------LISTLAGSLGNITSID 226 (459)
T ss_pred ccchhhhhhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhh---------------hhhhhhccCCCcceee
Confidence 4777778889999999999999999999999999999999998654421 1122233457899999
Q ss_pred ECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
|.++++++++++.|+.+++|+.+. ....++.+|++.|+++.|......+++|+.|.+|++||+....+..++..
T Consensus 227 ~d~~~~~~iAas~d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~----- 301 (459)
T KOG0288|consen 227 FDSDNKHVIAASNDKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP----- 301 (459)
T ss_pred ecCCCceEEeecCCCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-----
Confidence 999999999999999999999874 56678999999999999998887899999999999999988665543311
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
...++.|..+ ...+++|..|++||+||.++..++..+..+.
T Consensus 302 -------------------------------------~S~cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg 342 (459)
T KOG0288|consen 302 -------------------------------------GSQCNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGG 342 (459)
T ss_pred -------------------------------------cccccceEec--ceeeeecccccceEEEeccCCceeeEeecCc
Confidence 1122334333 4568899999999999999998888876654
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC----CCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH----REPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h----~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
.|+++..++++. -|++++.|.++.+.|+++......+.+- ...++.+.|||++.|+|+||.||.|+
T Consensus 343 -~vtSl~ls~~g~---------~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvfSpd~~YvaAGS~dgsv~ 412 (459)
T KOG0288|consen 343 -RVTSLDLSMDGL---------ELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVFSPDGSYVAAGSADGSVY 412 (459)
T ss_pred -ceeeEeeccCCe---------EEeeecCCCceeeeecccccEEEEeeccccccccccceeEECCCCceeeeccCCCcEE
Confidence 899999999885 4677799999999999998877766432 12378999999999999999999999
Q ss_pred EEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 456 IWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 456 iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
||++.++++...+.. +.+|++++|+|.|..|++++.++.+.+|
T Consensus 413 iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~~v~lW 458 (459)
T KOG0288|consen 413 IWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQKAVTLW 458 (459)
T ss_pred EEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCcceEec
Confidence 999999999877754 3469999999999999999999999998
No 42
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=100.00 E-value=1.1e-34 Score=268.93 Aligned_cols=304 Identities=24% Similarity=0.334 Sum_probs=238.6
Q ss_pred ccccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEE
Q 010759 139 SFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 218 (502)
Q Consensus 139 ~~~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 218 (502)
...||..+-..|++|+..|.++++.|.|..|+|||.|.+|++||+...... .+.++.........|.+
T Consensus 152 ~~~IP~shEi~l~hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas------------~~~fr~l~P~E~h~i~s 219 (641)
T KOG0772|consen 152 IKLIPGSHEIQLKHGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDAS------------MRSFRQLQPCETHQINS 219 (641)
T ss_pred hhcCCccceEeccCCceEEEEeeecCCCceeeeccccceEEEEeccccccc------------chhhhccCcccccccce
Confidence 346899999999999999999999999999999999999999999754321 12222223334567999
Q ss_pred EEECCCCCEEEEEECCCcEEEEECCCceeEe-------------ecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEecc
Q 010759 219 LDWNGEGTLLATGSYDGQARIWSTNGDLKCT-------------LSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 219 l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~-------------~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~ 284 (502)
++|++.|..|++.+....++|+|..|..... ..+|...+++.+|+|.. ..|+|++.||++||||+.
T Consensus 220 l~ys~Tg~~iLvvsg~aqakl~DRdG~~~~e~~KGDQYI~Dm~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRiWdv~ 299 (641)
T KOG0772|consen 220 LQYSVTGDQILVVSGSAQAKLLDRDGFEIVEFSKGDQYIRDMYNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRIWDVN 299 (641)
T ss_pred eeecCCCCeEEEEecCcceeEEccCCceeeeeeccchhhhhhhccCCceeeeeccccccCcccceEEecCCCcEEEEecC
Confidence 9999999999999999999999987754432 35799999999999976 469999999999999987
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
..+-..+. +.. +...+..-.++.++|+|+|++||+|..||.|.+|
T Consensus 300 ~~k~q~qV-----------------------------ik~------k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ~W 344 (641)
T KOG0772|consen 300 NTKSQLQV-----------------------------IKT------KPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQIW 344 (641)
T ss_pred CchhheeE-----------------------------Eee------ccCCCcccCceeeecCCCcchhhhcccCCceeee
Confidence 54311111 000 0111334467889999999999999999999999
Q ss_pred eCCCCce--e-eecccCCC--cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCC--CCEEEE
Q 010759 365 NMKQDKY--V-HDLREHSK--EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHR--EPVYSL 436 (502)
Q Consensus 365 d~~~~~~--~-~~~~~~~~--~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~--~~v~~l 436 (502)
+...... . +.-.+|.. .|++|.||++|. +|+|-+.|+++++||++..+ ++.+..+.. -+-+.+
T Consensus 345 ~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~---------~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc 415 (641)
T KOG0772|consen 345 DKGSRTVRPVMKVKDAHLPGQDITSISFSYDGN---------YLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDC 415 (641)
T ss_pred ecCCcccccceEeeeccCCCCceeEEEeccccc---------hhhhccCCCceeeeeccccccchhhhcCCCccCCCCcc
Confidence 9754321 1 11235655 899999999997 89999999999999999654 455554432 346789
Q ss_pred EECCCCCEEEEEeC------CCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 437 AFSPTGEYLASGSL------DKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 437 ~~spdg~~lasgs~------Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+|||+.++|++|+. -|.+.+|+..+...+..+.- ...|..+.|||.-+.|.+++.||+++||
T Consensus 416 ~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~WhpkLNQi~~gsgdG~~~vy 484 (641)
T KOG0772|consen 416 CFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPKLNQIFAGSGDGTAHVY 484 (641)
T ss_pred ccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecchhhheeeecCCCceEEE
Confidence 99999999999864 47899999999888777643 4458899999999999999999999887
No 43
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=3.4e-34 Score=244.55 Aligned_cols=283 Identities=24% Similarity=0.368 Sum_probs=249.1
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCce---eEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEec
Q 010759 208 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 208 ~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~ 283 (502)
.+.+|.+.|.+++|+.+|..|++|+.|+++++|+++... .....+|++.|-.++|+|.. +.|++++.|++|++||+
T Consensus 15 ~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd~ 94 (313)
T KOG1407|consen 15 ELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWDI 94 (313)
T ss_pred HhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEEe
Confidence 345667889999999999999999999999999987542 22467899999999998854 68999999999999999
Q ss_pred cCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
+.+++........+.+...-+.++..++.+..|..|...+.++.+.+..+. ..-.++-++|+.++.+|+.....|+|.|
T Consensus 95 r~~k~~~~i~~~~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~-~~~e~ne~~w~~~nd~Fflt~GlG~v~I 173 (313)
T KOG1407|consen 95 RSGKCTARIETKGENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQ-FKFEVNEISWNNSNDLFFLTNGLGCVEI 173 (313)
T ss_pred ccCcEEEEeeccCcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhc-ccceeeeeeecCCCCEEEEecCCceEEE
Confidence 999998888777666666666778889999999999999998877665433 3346778999988888888888899999
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
-....-+++.++++|...+.+|.|+|+|+ ++|+|+.|..+.+||+...-++..+.-+.-||..|+||.||+
T Consensus 174 LsypsLkpv~si~AH~snCicI~f~p~Gr---------yfA~GsADAlvSLWD~~ELiC~R~isRldwpVRTlSFS~dg~ 244 (313)
T KOG1407|consen 174 LSYPSLKPVQSIKAHPSNCICIEFDPDGR---------YFATGSADALVSLWDVDELICERCISRLDWPVRTLSFSHDGR 244 (313)
T ss_pred EeccccccccccccCCcceEEEEECCCCc---------eEeeccccceeeccChhHhhhheeeccccCceEEEEeccCcc
Confidence 99999999999999999999999999997 899999999999999998888999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC---------CeEEEEEe
Q 010759 444 YLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN---------HTVCVLDF 500 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~---------~~v~v~~~ 500 (502)
|||+||.|..|-|=++.+|..+..++..+..+.++|+|...+||.+..| |+|.+|.+
T Consensus 245 ~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLAyA~ddk~~d~~reag~vKiFG~ 310 (313)
T KOG1407|consen 245 MLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLAYACDDKDGDSNREAGTVKIFGL 310 (313)
T ss_pred eeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceeeEEecCCCCccccccceeEEecC
Confidence 9999999999999999999999999999999999999999999988664 46777654
No 44
>KOG0281 consensus Beta-TrCP (transducin repeats containing)/Slimb proteins [Function unknown]
Probab=100.00 E-value=3.1e-36 Score=266.45 Aligned_cols=273 Identities=25% Similarity=0.470 Sum_probs=233.7
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
-.++|+|+.+ |...++||..|++|+|||..+-. +++ ...+|++.|.|+.|.. +.+++|+
T Consensus 196 ~skgVYClQY--DD~kiVSGlrDnTikiWD~n~~~-------------c~~----~L~GHtGSVLCLqyd~--rviisGS 254 (499)
T KOG0281|consen 196 NSKGVYCLQY--DDEKIVSGLRDNTIKIWDKNSLE-------------CLK----ILTGHTGSVLCLQYDE--RVIVSGS 254 (499)
T ss_pred cCCceEEEEe--cchhhhcccccCceEEeccccHH-------------HHH----hhhcCCCcEEeeeccc--eEEEecC
Confidence 4568999988 56679999999999999976432 122 2345688999999864 5999999
Q ss_pred CCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc---eeEEeeecccCeEEEecCCCc
Q 010759 233 YDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE---WKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 233 ~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~~ 308 (502)
.|.+|+|||.+ ++...++.+|..+|..+.|+. .+++++|.|.++.+||+.... +...+.+|...+..++|.+.
T Consensus 255 SDsTvrvWDv~tge~l~tlihHceaVLhlrf~n--g~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k- 331 (499)
T KOG0281|consen 255 SDSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSN--GYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK- 331 (499)
T ss_pred CCceEEEEeccCCchhhHHhhhcceeEEEEEeC--CEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc-
Confidence 99999999986 466678889999999999974 599999999999999986543 34456788899999999776
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
.+++++.|.+|++|++.+...++++.||...|.|+.+ .++++++||.|.+|++||+..|.++..+.+|..-|.++.|.
T Consensus 332 yIVsASgDRTikvW~~st~efvRtl~gHkRGIAClQY--r~rlvVSGSSDntIRlwdi~~G~cLRvLeGHEeLvRciRFd 409 (499)
T KOG0281|consen 332 YIVSASGDRTIKVWSTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRFD 409 (499)
T ss_pred eEEEecCCceEEEEeccceeeehhhhcccccceehhc--cCeEEEecCCCceEEEEeccccHHHHHHhchHHhhhheeec
Confidence 7889999999999999999999999999999999988 58999999999999999999999999999999999999996
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---------EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 389 PTGSGTNNPNQQLILASASFDSTVKLWDVELGK---------LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
.. -+++|+.||+|++||+..+. ++.++..|++.|..+.| |...+++++.|.+|.|||.
T Consensus 410 ~k-----------rIVSGaYDGkikvWdl~aaldpra~~~~~Cl~~lv~hsgRVFrLQF--D~fqIvsssHddtILiWdF 476 (499)
T KOG0281|consen 410 NK-----------RIVSGAYDGKIKVWDLQAALDPRAPASTLCLRTLVEHSGRVFRLQF--DEFQIISSSHDDTILIWDF 476 (499)
T ss_pred Cc-----------eeeeccccceEEEEecccccCCcccccchHHHhhhhccceeEEEee--cceEEEeccCCCeEEEEEc
Confidence 43 48999999999999987653 34456678999999999 4568999999999999999
Q ss_pred CCCee
Q 010759 460 KEGKI 464 (502)
Q Consensus 460 ~~~~~ 464 (502)
.++-.
T Consensus 477 l~~~~ 481 (499)
T KOG0281|consen 477 LNGPP 481 (499)
T ss_pred CCCCc
Confidence 87654
No 45
>KOG0282 consensus mRNA splicing factor [Function unknown]
Probab=100.00 E-value=1e-35 Score=274.17 Aligned_cols=283 Identities=22% Similarity=0.413 Sum_probs=240.8
Q ss_pred cccccCCCCeEEEEECC-CCCEEEEEECCCcEEEEECC--CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEec
Q 010759 207 GRTNEKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 207 ~~~~~~~~~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~ 283 (502)
....+|.+.|+++.|.| .+.+|++++.|+.|+||++. +.++.++.+|..+|..++|+++|..|+|+|-|+.|++||+
T Consensus 208 ~~~~gH~kgvsai~~fp~~~hLlLS~gmD~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD~~lKlwDt 287 (503)
T KOG0282|consen 208 HNLSGHTKGVSAIQWFPKKGHLLLSGGMDGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFDRFLKLWDT 287 (503)
T ss_pred eeccCCccccchhhhccceeeEEEecCCCceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecceeeeeecc
Confidence 34567889999999999 89999999999999999974 5677899999999999999999999999999999999999
Q ss_pred cCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
+||.+...+.... .+.++.|. +...|++++.|+.|+.||++.++.++.+..|-+.|+.+.|-++|+.+++.++|+++
T Consensus 288 ETG~~~~~f~~~~-~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~ 366 (503)
T KOG0282|consen 288 ETGQVLSRFHLDK-VPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSV 366 (503)
T ss_pred ccceEEEEEecCC-CceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccE
Confidence 9999888775432 34566664 44688999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---eEEEEeeCCCC--CEEE
Q 010759 362 KIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG---KLLYSLNGHRE--PVYS 435 (502)
Q Consensus 362 ~iwd~~~~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~--~v~~ 435 (502)
+||+.+..-.+.... .+...+.++..+|.+. +++.-+.|+.|.++.+... .....+.||.. --..
T Consensus 367 riWe~~~~v~ik~i~~~~~hsmP~~~~~P~~~---------~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~ 437 (503)
T KOG0282|consen 367 RIWENRIPVPIKNIADPEMHTMPCLTLHPNGK---------WFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQ 437 (503)
T ss_pred EEEEcCCCccchhhcchhhccCcceecCCCCC---------eehhhccCceEEEEecccccccCHhhhhcceeccCceee
Confidence 999998776554322 2233456777788876 7888899999999986532 12235677764 3466
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCC-CEEEEEECCCeEEEEE
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEG-DKIAACFANHTVCVLD 499 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g-~~la~~~~~~~v~v~~ 499 (502)
+.|||||.+|++|+.||.+.+||.++-+++..+..+ +.+..+.|+|-- ..+|+|+.+|.|.||+
T Consensus 438 v~fSpDG~~l~SGdsdG~v~~wdwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~~w~G~Ikiwd 503 (503)
T KOG0282|consen 438 VDFSPDGRTLCSGDSDGKVNFWDWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATCGWDGLIKIWD 503 (503)
T ss_pred EEEcCCCCeEEeecCCccEEEeechhhhhhhccccCCcceEEEEecCCCcceeEecccCceeEecC
Confidence 899999999999999999999999999999888765 678999999965 6999999999999996
No 46
>KOG0285 consensus Pleiotropic regulator 1 [RNA processing and modification]
Probab=100.00 E-value=5.9e-35 Score=259.33 Aligned_cols=245 Identities=26% Similarity=0.469 Sum_probs=226.8
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEc
Q 010759 246 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKI 324 (502)
Q Consensus 246 ~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~ 324 (502)
+...+.+|.+-|.++++.|.+.+|++|+.|++++|||+.++++..++.+|...+..+.+.+. -.+.+++.|+.|..||+
T Consensus 143 l~rVi~gHlgWVr~vavdP~n~wf~tgs~DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDL 222 (460)
T KOG0285|consen 143 LYRVISGHLGWVRSVAVDPGNEWFATGSADRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDL 222 (460)
T ss_pred ehhhhhhccceEEEEeeCCCceeEEecCCCceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEec
Confidence 34567899999999999999999999999999999999999999999999998888888654 45678899999999999
Q ss_pred CCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 325 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 325 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
..++.|+.|.||-+.|.|++.+|.-..|+||+.|.++||||+++...++.+.+|..+|.++.+.|... .++
T Consensus 223 e~nkvIR~YhGHlS~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dp---------qvi 293 (460)
T KOG0285|consen 223 EYNKVIRHYHGHLSGVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDP---------QVI 293 (460)
T ss_pred hhhhhHHHhccccceeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecCCC---------ceE
Confidence 99999999999999999999999999999999999999999999999999999999999999987654 588
Q ss_pred EEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCC
Q 010759 405 SASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEG 483 (502)
Q Consensus 405 sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g 483 (502)
+||.|++|++||++.|+...++..|...|.+++.+|....+|++|.|. |+-|++..|..++.+.++. .|++++-+.||
T Consensus 294 t~S~D~tvrlWDl~agkt~~tlt~hkksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~~nsD~ 372 (460)
T KOG0285|consen 294 TGSHDSTVRLWDLRAGKTMITLTHHKKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLSVNSDG 372 (460)
T ss_pred EecCCceEEEeeeccCceeEeeecccceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccceeeeeeeccCc
Confidence 999999999999999999999999999999999999999999999885 9999999999998887755 47899998888
Q ss_pred CEEEEEECCCeEEEEEee
Q 010759 484 DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 484 ~~la~~~~~~~v~v~~~~ 501 (502)
++++|+.+|.+.+||++
T Consensus 373 -v~~~G~dng~~~fwdwk 389 (460)
T KOG0285|consen 373 -VLVSGGDNGSIMFWDWK 389 (460)
T ss_pred -eEEEcCCceEEEEEecC
Confidence 88999999999999987
No 47
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=2.3e-34 Score=257.64 Aligned_cols=278 Identities=27% Similarity=0.482 Sum_probs=234.8
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC---CEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG---TLLA 229 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~---~~l~ 229 (502)
|.+.|.++... +++++||+.||++++|+..... .+.. .+|.++|..++|.... ..|+
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk~--------------~~~~----~Ght~~ik~v~~v~~n~~~~~fv 163 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGKS--------------IKTI----VGHTGPIKSVAWVIKNSSSCLFV 163 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCCce--------------EEEE----ecCCcceeeeEEEecCCccceEE
Confidence 88999999887 7899999999999999975421 1222 3467889988886433 3599
Q ss_pred EEECCCcEEEEECCCc-----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC-------------------
Q 010759 230 TGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT------------------- 285 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~------------------- 285 (502)
+++.|.++++|..+.. ......||..+|-++...++|..+++||.|.+|+||+..+
T Consensus 164 sas~Dqtl~Lw~~~~~~~~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~ 243 (423)
T KOG0313|consen 164 SASMDQTLRLWKWNVGENKVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKR 243 (423)
T ss_pred EecCCceEEEEEecCchhhhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhh
Confidence 9999999999986532 1123349999999999999999999999999999999221
Q ss_pred ------cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC
Q 010759 286 ------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 359 (502)
Q Consensus 286 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg 359 (502)
+..+..+.+|..+|.++-|.+...+.+++.|.+|++||+..+..+..+.+ ...++|+.++|..++|++|+.|.
T Consensus 244 ~~~~~~r~P~vtl~GHt~~Vs~V~w~d~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~Ll~~gssdr 322 (423)
T KOG0313|consen 244 EKEGGTRTPLVTLEGHTEPVSSVVWSDATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSKLLASGSSDR 322 (423)
T ss_pred hhcccccCceEEecccccceeeEEEcCCCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccceeeecCCCC
Confidence 12344678899999999999988899999999999999999887776654 45789999999999999999999
Q ss_pred cEEEEeCCCCc---eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCCCCEEE
Q 010759 360 TAKIWNMKQDK---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHREPVYS 435 (502)
Q Consensus 360 ~i~iwd~~~~~---~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~ 435 (502)
.|++||.+++. ..++|.+|...|.++.|+|... +.|++|+.|+++++||+++.+ +++.+.+|.+.|.+
T Consensus 323 ~irl~DPR~~~gs~v~~s~~gH~nwVssvkwsp~~~--------~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~ 394 (423)
T KOG0313|consen 323 HIRLWDPRTGDGSVVSQSLIGHKNWVSSVKWSPTNE--------FQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLS 394 (423)
T ss_pred ceeecCCCCCCCceeEEeeecchhhhhheecCCCCc--------eEEEEEecCCeEEEEEeccCCCcceeeccCCceEEE
Confidence 99999988653 3578889999999999999764 689999999999999999887 99999999999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+.|+ .+.+|++||.|+.|+|+...
T Consensus 395 vdW~-~~~~IvSGGaD~~l~i~~~~ 418 (423)
T KOG0313|consen 395 VDWN-EGGLIVSGGADNKLRIFKGS 418 (423)
T ss_pred Eecc-CCceEEeccCcceEEEeccc
Confidence 9996 57799999999999999753
No 48
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=7.4e-34 Score=274.27 Aligned_cols=294 Identities=22% Similarity=0.399 Sum_probs=249.5
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..+.||...|.+++||.+...++||+. +.++||+..+.+++ +++. ...+.+..|-|.+++
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~kci-------------RTi~------~~y~l~~~Fvpgd~~ 426 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLKCI-------------RTIT------CGYILASKFVPGDRY 426 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCccee-------------EEec------cccEEEEEecCCCce
Confidence 456799999999999999999998864 67999998876543 2221 236889999999999
Q ss_pred EEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 228 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+++|...|.+.++|... .++.++..|.+++++++.+|++..+++||.|++|++||..-.. ..
T Consensus 427 Iv~G~k~Gel~vfdlaS~~l~Eti~AHdgaIWsi~~~pD~~g~vT~saDktVkfWdf~l~~---~~-------------- 489 (888)
T KOG0306|consen 427 IVLGTKNGELQVFDLASASLVETIRAHDGAIWSISLSPDNKGFVTGSADKTVKFWDFKLVV---SV-------------- 489 (888)
T ss_pred EEEeccCCceEEEEeehhhhhhhhhccccceeeeeecCCCCceEEecCCcEEEEEeEEEEe---cc--------------
Confidence 99999999999999754 4556778999999999999999999999999999999964211 00
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
.+.... +..+...+ ++ .-...|.|+.+||||++||.+=.|.+++||-+.+-+..-++-+|.-||.++.
T Consensus 490 ------~gt~~k--~lsl~~~r---tL-el~ddvL~v~~Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smD 557 (888)
T KOG0306|consen 490 ------PGTQKK--VLSLKHTR---TL-ELEDDVLCVSVSPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMD 557 (888)
T ss_pred ------Ccccce--eeeeccce---EE-eccccEEEEEEcCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEe
Confidence 000000 11111111 11 1246799999999999999999999999999999999999999999999999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
.+|++. +++|||.|.+|++|-+.-|.|-..+-+|.+.|.++.|-|...++.|+|.|+.|+-||-.+-+.++
T Consensus 558 IS~DSk---------livTgSADKnVKiWGLdFGDCHKS~fAHdDSvm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq 628 (888)
T KOG0306|consen 558 ISPDSK---------LIVTGSADKNVKIWGLDFGDCHKSFFAHDDSVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQ 628 (888)
T ss_pred ccCCcC---------eEEeccCCCceEEeccccchhhhhhhcccCceeEEEEcccceeEEEecCcceEEeechhhhhhhe
Confidence 999987 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 467 TYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 467 ~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.+.++ ..|++++.+|+|.++++++.|.+|++|.
T Consensus 629 ~L~~H~~ev~cLav~~~G~~vvs~shD~sIRlwE 662 (888)
T KOG0306|consen 629 KLDGHHSEVWCLAVSPNGSFVVSSSHDKSIRLWE 662 (888)
T ss_pred eeccchheeeeeEEcCCCCeEEeccCCceeEeee
Confidence 98875 5699999999999999999999999995
No 49
>KOG0295 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=1.1e-34 Score=258.28 Aligned_cols=254 Identities=28% Similarity=0.469 Sum_probs=232.8
Q ss_pred EEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCC
Q 010759 239 IWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDN 317 (502)
Q Consensus 239 iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~ 317 (502)
.|-....+...+.+|..+|+.+-|+|+-..+++++.|++|++||..++++...+.+|...+.++.|.. ...+++++.|-
T Consensus 93 ~wipRp~l~~~l~g~r~~vt~v~~hp~~~~v~~as~d~tikv~D~~tg~~e~~LrGHt~sv~di~~~a~Gk~l~tcSsDl 172 (406)
T KOG0295|consen 93 LWIPRPNLVQKLAGHRSSVTRVIFHPSEALVVSASEDATIKVFDTETGELERSLRGHTDSVFDISFDASGKYLATCSSDL 172 (406)
T ss_pred hcCCCCCchhhhhccccceeeeeeccCceEEEEecCCceEEEEEccchhhhhhhhccccceeEEEEecCccEEEecCCcc
Confidence 35444456667788999999999999999999999999999999999999999999999999999965 46678889999
Q ss_pred eEEEEEcCC-CcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCC
Q 010759 318 MIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNN 396 (502)
Q Consensus 318 ~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~ 396 (502)
.+.+|+..+ ..+++.+.||...|.+++|-|.|.+|++++.|.+|+.|++.++-++.+|.+|...+..++...+|.
T Consensus 173 ~~~LWd~~~~~~c~ks~~gh~h~vS~V~f~P~gd~ilS~srD~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGt---- 248 (406)
T KOG0295|consen 173 SAKLWDFDTFFRCIKSLIGHEHGVSSVFFLPLGDHILSCSRDNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGT---- 248 (406)
T ss_pred chhheeHHHHHHHHHHhcCcccceeeEEEEecCCeeeecccccceeEEecccceeEEeccCchHhEEEEEecCCee----
Confidence 999999987 566778889999999999999999999999999999999999999999999999999999998886
Q ss_pred CCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC---------------CCEEEEEeCCCcEEEEeCCC
Q 010759 397 PNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT---------------GEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 397 ~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd---------------g~~lasgs~Dg~i~iw~~~~ 461 (502)
++|+++.|.+|++|-+.++++...++.|.-+|.+++|.|. +++++++|.|++|++||+.+
T Consensus 249 -----i~As~s~dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~t 323 (406)
T KOG0295|consen 249 -----IIASCSNDQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVST 323 (406)
T ss_pred -----EEEecCCCceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccC
Confidence 8999999999999999999999999999999999999762 26999999999999999999
Q ss_pred CeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 462 GKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 462 ~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|..+.++.++. .|.+++|+|-|++|++|..|++++|||++
T Consensus 324 g~cL~tL~ghdnwVr~~af~p~Gkyi~ScaDDktlrvwdl~ 364 (406)
T KOG0295|consen 324 GMCLFTLVGHDNWVRGVAFSPGGKYILSCADDKTLRVWDLK 364 (406)
T ss_pred CeEEEEEecccceeeeeEEcCCCeEEEEEecCCcEEEEEec
Confidence 99999998765 69999999999999999999999999986
No 50
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7.8e-34 Score=278.26 Aligned_cols=279 Identities=24% Similarity=0.394 Sum_probs=245.9
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
.+..|..++|+|.-.+++++--.|.|++||.. +.+...|..|.+||.++.|||.+..|+||+.|..|++|+..+.++.-
T Consensus 8 kSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrclf 87 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRCLF 87 (1202)
T ss_pred ccccccceecCCCCCEEEEeecCceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEecccceehh
Confidence 35678999999999999999999999999976 45666889999999999999999999999999999999999999999
Q ss_pred EeeecccCeEEEecCCCc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 291 QFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
++.+|..-+..+.|+... -++++|+|.+|++|+..+.+++..+.||...|.|..|+|...+++|+|.|.+|||||+..-
T Consensus 88 tL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLDQTVRVWDisGL 167 (1202)
T KOG0292|consen 88 TLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLDQTVRVWDISGL 167 (1202)
T ss_pred hhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEecccceEEEEeecch
Confidence 999999999999997655 5678899999999999999999999999999999999999999999999999999997421
Q ss_pred c-----------------------------eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC
Q 010759 370 K-----------------------------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG 420 (502)
Q Consensus 370 ~-----------------------------~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 420 (502)
+ ..+.+.+|...|.-++|+|.-. +++||+.|..|++|.+...
T Consensus 168 Rkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlp---------liVSG~DDRqVKlWrmnet 238 (1202)
T KOG0292|consen 168 RKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLP---------LIVSGADDRQVKLWRMNET 238 (1202)
T ss_pred hccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcc---------eEEecCCcceeeEEEeccc
Confidence 0 0123457888889999998765 8999999999999998644
Q ss_pred e--EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 421 K--LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 421 ~--~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
+ .+-+..||...|.++-|+|....++|.|.|++|+|||....+.++++.. +...+.++-+|.++.+|+|..+| +.|
T Consensus 239 KaWEvDtcrgH~nnVssvlfhp~q~lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~laahP~lNLfAAgHDsG-m~V 317 (1202)
T KOG0292|consen 239 KAWEVDTCRGHYNNVSSVLFHPHQDLILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWILAAHPELNLFAAGHDSG-MIV 317 (1202)
T ss_pred cceeehhhhcccCCcceEEecCccceeEecCCCccEEEEecccccceeeeeccCCeEEEEEecCCcceeeeecCCc-eEE
Confidence 3 2345789999999999999999999999999999999999999999964 67799999999999999998776 445
Q ss_pred EEe
Q 010759 498 LDF 500 (502)
Q Consensus 498 ~~~ 500 (502)
|-+
T Consensus 318 Fkl 320 (1202)
T KOG0292|consen 318 FKL 320 (1202)
T ss_pred EEE
Confidence 544
No 51
>KOG0306 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=100.00 E-value=2.2e-32 Score=264.11 Aligned_cols=320 Identities=26% Similarity=0.366 Sum_probs=241.8
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
...|+|++-+|+.-+||.|-.||.|+||++.+... .-..++|...|+++.|...|..|+|||.
T Consensus 65 k~evt~l~~~~d~l~lAVGYaDGsVqif~~~s~~~-----------------~~tfngHK~AVt~l~fd~~G~rlaSGsk 127 (888)
T KOG0306|consen 65 KAEVTCLRSSDDILLLAVGYADGSVQIFSLESEEI-----------------LITFNGHKAAVTTLKFDKIGTRLASGSK 127 (888)
T ss_pred cceEEEeeccCCcceEEEEecCceEEeeccCCCce-----------------eeeecccccceEEEEEcccCceEeecCC
Confidence 35899999999999999999999999999875421 1123567889999999999999999999
Q ss_pred CCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 234 DGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 234 dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
|+.|.+||+-++ -...+.+|+..|+..-|....+.+++.|.|+.|++||+.+..+..+.-.|.+.+..+.+.. ..+++
T Consensus 128 Dt~IIvwDlV~E~Gl~rL~GHkd~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~-~~lvt 206 (888)
T KOG0306|consen 128 DTDIIVWDLVGEEGLFRLRGHKDSITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDE-KLLVT 206 (888)
T ss_pred CccEEEEEeccceeeEEeecchHHHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEec-ceEEE
Confidence 999999997554 4567899999999999998889999999999999999999877776666665554444433 23333
Q ss_pred EcCCCeEEEEEcC-------------------------------------------------------------------
Q 010759 313 SSTDNMIYVCKIG------------------------------------------------------------------- 325 (502)
Q Consensus 313 ~~~d~~i~~~~~~------------------------------------------------------------------- 325 (502)
++.|..+.+|++.
T Consensus 207 ~~~dse~~v~~L~~~~D~~~~~~~~s~~~~G~~~rqsk~R~i~l~~d~s~r~~~c~g~d~~~e~frI~s~~E~~k~l~Kk 286 (888)
T KOG0306|consen 207 AGTDSELKVWELAFEDDEKETNRYISTKLRGTFIRQSKGREINLVTDFSDRFLVCQGADKVIELFRIRSKEEIAKILSKK 286 (888)
T ss_pred EecCCceEEEEeecccccccccccceeeccceeeeccCCceeEEeecCcccEEEEecchhhhhheeecCHHHHHHHHHHH
Confidence 3444444444430
Q ss_pred ------------------------------------------------------------------CCcce---------
Q 010759 326 ------------------------------------------------------------------ENRPI--------- 330 (502)
Q Consensus 326 ------------------------------------------------------------------~~~~~--------- 330 (502)
.....
T Consensus 287 ~k~~Kkka~t~e~~~~v~~sl~~~i~r~~~ir~~~kiks~dv~~~~~~~~~lv~l~nNtv~~ysl~~s~~~~p~~~~~~~ 366 (888)
T KOG0306|consen 287 LKRAKKKAETEENEDDVEKSLSDEIKRLETIRTSAKIKSFDVTPSGGTENTLVLLANNTVEWYSLENSGKTSPEADRTSN 366 (888)
T ss_pred HHHhhhhccccccccchhhhHHHHHHHHHheechhheeEEEEEecCCcceeEEEeecCceEEEEeccCCCCCccccccce
Confidence 00000
Q ss_pred eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce---------------------------------------
Q 010759 331 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--------------------------------------- 371 (502)
Q Consensus 331 ~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--------------------------------------- 371 (502)
..+.||...|.+++++.+...++||+. +.|+||+..+.++
T Consensus 367 i~~~GHR~dVRsl~vS~d~~~~~Sga~-~SikiWn~~t~kciRTi~~~y~l~~~Fvpgd~~Iv~G~k~Gel~vfdlaS~~ 445 (888)
T KOG0306|consen 367 IEIGGHRSDVRSLCVSSDSILLASGAG-ESIKIWNRDTLKCIRTITCGYILASKFVPGDRYIVLGTKNGELQVFDLASAS 445 (888)
T ss_pred eeeccchhheeEEEeecCceeeeecCC-CcEEEEEccCcceeEEeccccEEEEEecCCCceEEEeccCCceEEEEeehhh
Confidence 123466666777777766666655543 4566676654443
Q ss_pred -eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-----C--eEEEEee-----CCCCCEEEEEE
Q 010759 372 -VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-----G--KLLYSLN-----GHREPVYSLAF 438 (502)
Q Consensus 372 -~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-----~--~~~~~~~-----~h~~~v~~l~~ 438 (502)
+.++++|.+.|++++.+|++. .+++||.|.+|++||..- + +.+..+. .....|.|+++
T Consensus 446 l~Eti~AHdgaIWsi~~~pD~~---------g~vT~saDktVkfWdf~l~~~~~gt~~k~lsl~~~rtLel~ddvL~v~~ 516 (888)
T KOG0306|consen 446 LVETIRAHDGAIWSISLSPDNK---------GFVTGSADKTVKFWDFKLVVSVPGTQKKVLSLKHTRTLELEDDVLCVSV 516 (888)
T ss_pred hhhhhhccccceeeeeecCCCC---------ceEEecCCcEEEEEeEEEEeccCcccceeeeeccceEEeccccEEEEEE
Confidence 334567889999999999987 588999999999999641 1 1222221 13467999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
||||+|||.+=-|.+|+||-+.+-+..-++.|| -+|.++..|||++.+++|++|.+|.||.+.
T Consensus 517 Spdgk~LaVsLLdnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLd 580 (888)
T KOG0306|consen 517 SPDGKLLAVSLLDNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLD 580 (888)
T ss_pred cCCCcEEEEEeccCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccc
Confidence 999999999999999999999998876666665 479999999999999999999999999653
No 52
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=3.7e-34 Score=251.16 Aligned_cols=289 Identities=20% Similarity=0.351 Sum_probs=239.9
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
|.++-+.|..|||||++|+|||.||.|.+|+..+|+..+.....+- ....-+..+|.|+.||.|..++++|
T Consensus 211 g~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAq---------d~fMMmd~aVlci~FSRDsEMlAsG 281 (508)
T KOG0275|consen 211 GQKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQ---------DNFMMMDDAVLCISFSRDSEMLASG 281 (508)
T ss_pred ccccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhh---------cceeecccceEEEeecccHHHhhcc
Confidence 5566789999999999999999999999999988865432221111 1112246789999999999999999
Q ss_pred ECCCcEEEEECC-CceeEeec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 232 SYDGQARIWSTN-GDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 232 ~~dg~i~iw~~~-~~~~~~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
+.||.|++|.+. +.+...|. .|+..|+++.|+.++..++++|.|.++++.-+++++
T Consensus 282 sqDGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK---------------------- 339 (508)
T KOG0275|consen 282 SQDGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK---------------------- 339 (508)
T ss_pred CcCCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch----------------------
Confidence 999999999976 45555564 799999999999999999999999999998776654
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC--CCcEEEEEE
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH--SKEIYTIRW 387 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~--~~~i~~~~~ 387 (502)
.++.|+||.+.|+.+.|.++|..+++++.||+|++|+.++..++.+|+.. .-+|.++..
T Consensus 340 -------------------~LKEfrGHsSyvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~ 400 (508)
T KOG0275|consen 340 -------------------CLKEFRGHSSYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVIL 400 (508)
T ss_pred -------------------hHHHhcCccccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEE
Confidence 45678899999999999999999999999999999999999999888754 346777776
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC---CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH---REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
-|... ..++.+...++|.|.++. |+.+.++... .+..-+.+.||.|.|+.+.+.|+.++.|.+.+|++
T Consensus 401 ~PKnp--------eh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~~sG~L 471 (508)
T KOG0275|consen 401 LPKNP--------EHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSVLSGKL 471 (508)
T ss_pred cCCCC--------ceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEeecCce
Confidence 66543 135668888999999986 7787777532 23455667899999999999999999999999999
Q ss_pred EEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 465 VKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 465 ~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
..++.-+ ..+.+++-+|--+.||+-+.||.+.+|.
T Consensus 472 E~tl~VhEkdvIGl~HHPHqNllAsYsEDgllKLWk 507 (508)
T KOG0275|consen 472 ERTLPVHEKDVIGLTHHPHQNLLASYSEDGLLKLWK 507 (508)
T ss_pred eeeeecccccccccccCcccchhhhhcccchhhhcC
Confidence 9888754 4588999999999999999999999883
No 53
>KOG0292 consensus Vesicle coat complex COPI, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.2e-32 Score=269.97 Aligned_cols=284 Identities=21% Similarity=0.381 Sum_probs=246.1
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
+..-+..|-.++|+|...+++++=-.|.|++||..=+. +..+...|.++|..++|+|...+|+
T Consensus 5 fEskSsRvKglsFHP~rPwILtslHsG~IQlWDYRM~t-----------------li~rFdeHdGpVRgv~FH~~qplFV 67 (1202)
T KOG0292|consen 5 FESKSSRVKGLSFHPKRPWILTSLHSGVIQLWDYRMGT-----------------LIDRFDEHDGPVRGVDFHPTQPLFV 67 (1202)
T ss_pred hhcccccccceecCCCCCEEEEeecCceeeeehhhhhh-----------------HHhhhhccCCccceeeecCCCCeEE
Confidence 44567789999999999999999999999999975332 2234457889999999999999999
Q ss_pred EEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-C
Q 010759 230 TGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-N 307 (502)
Q Consensus 230 sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~ 307 (502)
|||.|-.|++|+... .+..++.+|-.-|..+.||+.-.+++|+|.|.||+|||.+++.++..+.+|.--|++..|++ .
T Consensus 68 SGGDDykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptE 147 (1202)
T KOG0292|consen 68 SGGDDYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTE 147 (1202)
T ss_pred ecCCccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCcc
Confidence 999999999999764 55668899999999999999999999999999999999999999999999999999999987 6
Q ss_pred ceEEEEcCCCeEEEEEcCCCc-----------------------------ceeeecCCCcceeEEEEcCCCCEEEEEeCC
Q 010759 308 VSFATSSTDNMIYVCKIGENR-----------------------------PIKTFAGHQGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~-----------------------------~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d 358 (502)
..++++|-|.+|++||+..-+ .-..+.||...|+-++|+|.-.+|+||++|
T Consensus 148 DlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~DaVVK~VLEGHDRGVNwaAfhpTlpliVSG~DD 227 (1202)
T KOG0292|consen 148 DLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQTDAVVKHVLEGHDRGVNWAAFHPTLPLIVSGADD 227 (1202)
T ss_pred ceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCcCeeeeeeecccccccceEEecCCcceEEecCCc
Confidence 678899999999999985311 113467999999999999999999999999
Q ss_pred CcEEEEeCCCCc--eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEE
Q 010759 359 VTAKIWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSL 436 (502)
Q Consensus 359 g~i~iwd~~~~~--~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 436 (502)
..|++|.+...+ .+-+.++|...|.++-|+|... +++|.|.|++||+||+...+.+++++...+..+.|
T Consensus 228 RqVKlWrmnetKaWEvDtcrgH~nnVssvlfhp~q~---------lIlSnsEDksirVwDm~kRt~v~tfrrendRFW~l 298 (1202)
T KOG0292|consen 228 RQVKLWRMNETKAWEVDTCRGHYNNVSSVLFHPHQD---------LILSNSEDKSIRVWDMTKRTSVQTFRRENDRFWIL 298 (1202)
T ss_pred ceeeEEEeccccceeehhhhcccCCcceEEecCccc---------eeEecCCCccEEEEecccccceeeeeccCCeEEEE
Confidence 999999987554 3567899999999999999653 78899999999999999999999998777889999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCC
Q 010759 437 AFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 437 ~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+-+|..+++|+|- |+-+.+|.+.
T Consensus 299 aahP~lNLfAAgH-DsGm~VFkle 321 (1202)
T KOG0292|consen 299 AAHPELNLFAAGH-DSGMIVFKLE 321 (1202)
T ss_pred EecCCcceeeeec-CCceEEEEEc
Confidence 9999998877654 5556666654
No 54
>KOG0266 consensus WD40 repeat-containing protein [General function prediction only]
Probab=100.00 E-value=6.5e-33 Score=277.19 Aligned_cols=240 Identities=40% Similarity=0.690 Sum_probs=215.1
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
...|.++.|+++|+++++++.++.+++|+.... ....+.+|...|..++|+|++.++++|+.|++|++||+...
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~--- 235 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASSDGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDD--- 235 (456)
T ss_pred cCceEEEEEcCCCCeEEEccCCCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCC---
Confidence 578999999999999999999999999998432 34556899999999999999999999999999999998322
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
...++++.||...|++++|+|+|+++++|+.|++|+|||++++
T Consensus 236 -------------------------------------~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~ 278 (456)
T KOG0266|consen 236 -------------------------------------GRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG 278 (456)
T ss_pred -------------------------------------CeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC
Confidence 1235678899999999999999999999999999999999999
Q ss_pred ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeCCCCC--EEEEEECCCCCEE
Q 010759 370 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNGHREP--VYSLAFSPTGEYL 445 (502)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~--v~~l~~spdg~~l 445 (502)
+++..+.+|...|.+++|++++. +|++++.|+.|+|||+.++. ++..+.++..+ ++++.|+|++.+|
T Consensus 279 ~~~~~l~~hs~~is~~~f~~d~~---------~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~l 349 (456)
T KOG0266|consen 279 ECVRKLKGHSDGISGLAFSPDGN---------LLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYL 349 (456)
T ss_pred eEEEeeeccCCceEEEEECCCCC---------EEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEE
Confidence 99999999999999999999997 78899999999999999999 56777777655 9999999999999
Q ss_pred EEEeCCCcEEEEeCCCCeeEEEEecCC----CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 446 ASGSLDKSMHIWSLKEGKIVKTYTGNG----GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~~~~~~~~~~~----~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++++.|+.+++|++..+..+..+.++. .+++...++.|.++.+|+.|+.|.+||+.
T Consensus 350 l~~~~d~~~~~w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~sg~~d~~v~~~~~~ 409 (456)
T KOG0266|consen 350 LSASLDRTLKLWDLRSGKSVGTYTGHSNLVRCIFSPTLSTGGKLIYSGSEDGSVYVWDSS 409 (456)
T ss_pred EEecCCCeEEEEEccCCcceeeecccCCcceeEecccccCCCCeEEEEeCCceEEEEeCC
Confidence 999999999999999999988887642 45667778999999999999999999974
No 55
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=100.00 E-value=3.9e-33 Score=280.75 Aligned_cols=294 Identities=27% Similarity=0.464 Sum_probs=233.5
Q ss_pred cccceeEEEECCCCCEEEEEe--CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 230 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs--~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s 230 (502)
+...|+++..+|+|..+|||| .|+.++||+...-.. .......+ +.........|.+.|.|+.|++||++||+
T Consensus 12 ~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~--~~~~~~~~---l~k~l~~m~~h~~sv~CVR~S~dG~~lAs 86 (942)
T KOG0973|consen 12 NEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLD--EKEEKNEN---LPKHLCTMDDHDGSVNCVRFSPDGSYLAS 86 (942)
T ss_pred CCeeEEEEEecCCceeEecCCccccccceeeccccccc--hhhhhhcc---cchhheeeccccCceeEEEECCCCCeEee
Confidence 456799999999999999999 999999998642110 00000000 11111223456889999999999999999
Q ss_pred EECCCcEEEEECCC-------------------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 231 GSYDGQARIWSTNG-------------------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 231 g~~dg~i~iw~~~~-------------------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
|+.|+.|.||.... .....+.+|.+.|..++|+|++.+|+++|.|++|.|||.++.+.
T Consensus 87 GSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lvS~s~DnsViiwn~~tF~~--- 163 (942)
T KOG0973|consen 87 GSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLVSVSLDNSVIIWNAKTFEL--- 163 (942)
T ss_pred ccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEEEecccceEEEEcccccee---
Confidence 99999999998651 14567889999999999999999999999999999999877543
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
+..+.+|.+.|-.+.|.|-|++||+-++|++|+||++....+
T Consensus 164 --------------------------------------~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i 205 (942)
T KOG0973|consen 164 --------------------------------------LKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGI 205 (942)
T ss_pred --------------------------------------eeeeecccccccceEECCccCeeeeecCCceEEEEEccccee
Confidence 346678889999999999999999999999999999877666
Q ss_pred eeecccCC------CcEEEEEEccCCCCCCCCCCcEEEEEEe----CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 372 VHDLREHS------KEIYTIRWSPTGSGTNNPNQQLILASAS----FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 372 ~~~~~~~~------~~i~~~~~sp~g~~~~~~~~~~~l~sgs----~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
.+.+..+- .-++.+.|||+|. +|++.. .-.++.|.+-.+.+.-..+-||..++.+++|+|.
T Consensus 206 ~k~It~pf~~~~~~T~f~RlSWSPDG~---------~las~nA~n~~~~~~~IieR~tWk~~~~LvGH~~p~evvrFnP~ 276 (942)
T KOG0973|consen 206 EKSITKPFEESPLTTFFLRLSWSPDGH---------HLASPNAVNGGKSTIAIIERGTWKVDKDLVGHSAPVEVVRFNPK 276 (942)
T ss_pred eEeeccchhhCCCcceeeecccCCCcC---------eecchhhccCCcceeEEEecCCceeeeeeecCCCceEEEEeChH
Confidence 66655432 3467889999997 455432 2346888888888888889999999999999972
Q ss_pred --------C-------C--EEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 442 --------G-------E--YLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 442 --------g-------~--~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
| . .+|+||.|++|-||.....+.+.... .+..|++++|+|||-.|.+|+.||+|.++.|.
T Consensus 277 lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~LfacS~DGtV~~i~Fe 355 (942)
T KOG0973|consen 277 LFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFACSLDGTVALIHFE 355 (942)
T ss_pred HhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEEecCCeEEEEEcc
Confidence 1 1 57889999999999987666554432 25679999999999999999999999999874
No 56
>KOG1407 consensus WD40 repeat protein [Function unknown]
Probab=100.00 E-value=1.8e-32 Score=234.02 Aligned_cols=277 Identities=24% Similarity=0.443 Sum_probs=233.5
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~ 226 (502)
..+++|...|.+++|+.+|..|++|+.|+++++|++...... ......+|...|-.++|+| ...
T Consensus 14 r~~~~~~~~v~Sv~wn~~g~~lasgs~dktv~v~n~e~~r~~---------------~~~~~~gh~~svdql~w~~~~~d 78 (313)
T KOG1407|consen 14 RELQGHVQKVHSVAWNCDGTKLASGSFDKTVSVWNLERDRFR---------------KELVYRGHTDSVDQLCWDPKHPD 78 (313)
T ss_pred HHhhhhhhcceEEEEcccCceeeecccCCceEEEEecchhhh---------------hhhcccCCCcchhhheeCCCCCc
Confidence 457789999999999999999999999999999998754211 1122345677899999987 567
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
.|++++.|.+|++||... .+...+... +.-.-+.|+|+|.+++.++.|..|.+.|.++.+....+.+.. .+..+.|.
T Consensus 79 ~~atas~dk~ir~wd~r~~k~~~~i~~~-~eni~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~-e~ne~~w~ 156 (313)
T KOG1407|consen 79 LFATASGDKTIRIWDIRSGKCTARIETK-GENINITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKF-EVNEISWN 156 (313)
T ss_pred ceEEecCCceEEEEEeccCcEEEEeecc-CcceEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccc-eeeeeeec
Confidence 999999999999999764 444444433 334567899999999999999999999999887766554432 23445553
Q ss_pred -CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 306 -NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 306 -~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
.+..|.....-|.|.+.....-+|++.+..|.....||.|+|+|++||+|+.|..+.+||+..--+++.+..+.-+|.+
T Consensus 157 ~~nd~Fflt~GlG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~R~isRldwpVRT 236 (313)
T KOG1407|consen 157 NSNDLFFLTNGLGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICERCISRLDWPVRT 236 (313)
T ss_pred CCCCEEEEecCCceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhheeeccccCceEE
Confidence 4556666777799999999999999999999999999999999999999999999999999988888888889999999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
+.|+.+|. +||+||.|-.|-|=++++|..++.+. +.++-+.++|+|...+||-++.|
T Consensus 237 lSFS~dg~---------~lASaSEDh~IDIA~vetGd~~~eI~-~~~~t~tVAWHPk~~LLAyA~dd 293 (313)
T KOG1407|consen 237 LSFSHDGR---------MLASASEDHFIDIAEVETGDRVWEIP-CEGPTFTVAWHPKRPLLAYACDD 293 (313)
T ss_pred EEeccCcc---------eeeccCccceEEeEecccCCeEEEee-ccCCceeEEecCCCceeeEEecC
Confidence 99999997 89999999999999999999999998 78999999999999999977765
No 57
>KOG0313 consensus Microtubule binding protein YTM1 (contains WD40 repeats) [Cytoskeleton]
Probab=100.00 E-value=8.4e-33 Score=247.66 Aligned_cols=274 Identities=30% Similarity=0.517 Sum_probs=230.1
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCC---EEEEecCCCeEEEEeccCcce
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD---YLLTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~---~l~sgs~D~~v~iwd~~~~~~ 288 (502)
|...|.++... ++++++|++||.+++|+..|....++.+|.++|.+++|.-... .|+++|.|.++++|-.+.++.
T Consensus 104 hdDWVSsv~~~--~~~IltgsYDg~~riWd~~Gk~~~~~~Ght~~ik~v~~v~~n~~~~~fvsas~Dqtl~Lw~~~~~~~ 181 (423)
T KOG0313|consen 104 HDDWVSSVKGA--SKWILTGSYDGTSRIWDLKGKSIKTIVGHTGPIKSVAWVIKNSSSCLFVSASMDQTLRLWKWNVGEN 181 (423)
T ss_pred chhhhhhhccc--CceEEEeecCCeeEEEecCCceEEEEecCCcceeeeEEEecCCccceEEEecCCceEEEEEecCchh
Confidence 44566666655 6899999999999999999999999999999999888864443 599999999999998876653
Q ss_pred ----eEEeeecccCeEEEec-CCCceEEEEcCCCeEEEEEcC-------------------------CCcceeeecCCCc
Q 010759 289 ----KQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIG-------------------------ENRPIKTFAGHQG 338 (502)
Q Consensus 289 ----~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~-------------------------~~~~~~~~~~h~~ 338 (502)
.....+|..+|-++.. ....+|++++-|.++.+|+.. ...|+..+.||+.
T Consensus 182 ~~~~~~~~~GHk~~V~sVsv~~sgtr~~SgS~D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~ 261 (423)
T KOG0313|consen 182 KVKALKVCRGHKRSVDSVSVDSSGTRFCSGSWDTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTE 261 (423)
T ss_pred hhhHHhHhcccccceeEEEecCCCCeEEeecccceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEeccccc
Confidence 2334588999999885 567889999999999999921 1236778899999
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE 418 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~ 418 (502)
+|.+|.|++ ...+++++.|.+|+.||+.++..+.++.. ...+.++.++|... +|++|+.|..||+||.+
T Consensus 262 ~Vs~V~w~d-~~v~yS~SwDHTIk~WDletg~~~~~~~~-~ksl~~i~~~~~~~---------Ll~~gssdr~irl~DPR 330 (423)
T KOG0313|consen 262 PVSSVVWSD-ATVIYSVSWDHTIKVWDLETGGLKSTLTT-NKSLNCISYSPLSK---------LLASGSSDRHIRLWDPR 330 (423)
T ss_pred ceeeEEEcC-CCceEeecccceEEEEEeecccceeeeec-CcceeEeecccccc---------eeeecCCCCceeecCCC
Confidence 999999997 67788999999999999999998877654 56789999998664 89999999999999998
Q ss_pred CCe---EEEEeeCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEeCCCCe-eEEEEec-CCCEEEEEECCCCCEEEEEECC
Q 010759 419 LGK---LLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEGK-IVKTYTG-NGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 419 ~~~---~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~~-~~~~~~~-~~~i~~~~ws~~g~~la~~~~~ 492 (502)
++. ..+++.+|...|.++.|+|... .|++|+.|+++++||++.-+ .+..+.+ +..|.++.|+. |..+++|+.|
T Consensus 331 ~~~gs~v~~s~~gH~nwVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~-~~~IvSGGaD 409 (423)
T KOG0313|consen 331 TGDGSVVSQSLIGHKNWVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNE-GGLIVSGGAD 409 (423)
T ss_pred CCCCceeEEeeecchhhhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccC-CceEEeccCc
Confidence 763 4578999999999999999875 57899999999999999876 5666655 55699999965 4589999999
Q ss_pred CeEEEEE
Q 010759 493 HTVCVLD 499 (502)
Q Consensus 493 ~~v~v~~ 499 (502)
.+|+|+.
T Consensus 410 ~~l~i~~ 416 (423)
T KOG0313|consen 410 NKLRIFK 416 (423)
T ss_pred ceEEEec
Confidence 9999873
No 58
>KOG0645 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=3e-32 Score=233.91 Aligned_cols=236 Identities=32% Similarity=0.635 Sum_probs=199.4
Q ss_pred cCCCCeEEEEECCC-CCEEEEEECCCcEEEEECCC-c---eeEee-cCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc
Q 010759 211 EKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNG-D---LKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 211 ~~~~~V~~l~~s~~-~~~l~sg~~dg~i~iw~~~~-~---~~~~~-~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~ 284 (502)
+|...|..++|+|- |..|+|+|.|+.|++|+..+ . ++..+ .+|+..|.+++|+|.|++|++||-|.++.||.-.
T Consensus 12 gh~~r~W~~awhp~~g~ilAscg~Dk~vriw~~~~~~s~~ck~vld~~hkrsVRsvAwsp~g~~La~aSFD~t~~Iw~k~ 91 (312)
T KOG0645|consen 12 GHKDRVWSVAWHPGKGVILASCGTDKAVRIWSTSSGDSWTCKTVLDDGHKRSVRSVAWSPHGRYLASASFDATVVIWKKE 91 (312)
T ss_pred CCCCcEEEEEeccCCceEEEeecCCceEEEEecCCCCcEEEEEeccccchheeeeeeecCCCcEEEEeeccceEEEeecC
Confidence 34567999999998 89999999999999999873 2 22222 4799999999999999999999999999999644
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
.+++ ..+..+.||.++|.|++|+++|.+||+|+.|..|-||
T Consensus 92 ~~ef---------------------------------------ecv~~lEGHEnEVK~Vaws~sG~~LATCSRDKSVWiW 132 (312)
T KOG0645|consen 92 DGEF---------------------------------------ECVATLEGHENEVKCVAWSASGNYLATCSRDKSVWIW 132 (312)
T ss_pred CCce---------------------------------------eEEeeeeccccceeEEEEcCCCCEEEEeeCCCeEEEE
Confidence 3321 2355788999999999999999999999999999999
Q ss_pred eCCCC---ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC---CCeEEEEeeCCCCCEEEEEE
Q 010759 365 NMKQD---KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE---LGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 365 d~~~~---~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~ 438 (502)
.+..+ .++..++.|.+.|..+.|+|... +|+|+|+|++|++|.-. ...+++++.+|...|.+++|
T Consensus 133 e~deddEfec~aVL~~HtqDVK~V~WHPt~d---------lL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F 203 (312)
T KOG0645|consen 133 EIDEDDEFECIAVLQEHTQDVKHVIWHPTED---------LLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAF 203 (312)
T ss_pred EecCCCcEEEEeeeccccccccEEEEcCCcc---------eeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEe
Confidence 98744 45677889999999999999764 89999999999999765 34689999999999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+|.|..|++++.|++|+||.....- ...+...++.++|. ...||+++.|+.|.||-
T Consensus 204 ~~~G~rl~s~sdD~tv~Iw~~~~~~---~~~~sr~~Y~v~W~--~~~IaS~ggD~~i~lf~ 259 (312)
T KOG0645|consen 204 DNIGSRLVSCSDDGTVSIWRLYTDL---SGMHSRALYDVPWD--NGVIASGGGDDAIRLFK 259 (312)
T ss_pred cCCCceEEEecCCcceEeeeeccCc---chhcccceEeeeec--ccceEeccCCCEEEEEE
Confidence 9999999999999999999865211 11224579999998 45899999999999884
No 59
>KOG0293 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=3.2e-33 Score=252.60 Aligned_cols=280 Identities=24% Similarity=0.404 Sum_probs=233.3
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~ 285 (502)
..|...|..+.||++|+||||++.|.+..+|.+.. .+..++.+|..+|.-+.|+|+.+||++|+.|..+++||+.+
T Consensus 221 ~~htdEVWfl~FS~nGkyLAsaSkD~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~t 300 (519)
T KOG0293|consen 221 QDHTDEVWFLQFSHNGKYLASASKDSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVDT 300 (519)
T ss_pred hhCCCcEEEEEEcCCCeeEeeccCCceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCCc
Confidence 35678899999999999999999999999998642 34678899999999999999999999999999999999999
Q ss_pred cceeEEeeec-ccCeEEEec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 286 EEWKQQFEFH-SGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 286 ~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
+.....+... ...+.+..| .+..+|++++.|+.+..|+++.+. ...+.+-. ..|.+++..+||+++++.+.|..|+
T Consensus 301 gd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlDgn~-~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~ 379 (519)
T KOG0293|consen 301 GDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPDRTIIMWDLDGNI-LGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIR 379 (519)
T ss_pred chhhhhcccCcCCCcceeEEccCCceeEecCCCCcEEEecCCcch-hhcccccccceeEEEEEcCCCcEEEEEeccccee
Confidence 9988777543 445666777 466789999999999999997654 23333332 3588999999999999999999999
Q ss_pred EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCC--EEEEEECC
Q 010759 363 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREP--VYSLAFSP 440 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~--v~~l~~sp 440 (502)
+++..+...+. +.....+|+++..|.++. ++++--.+..|++||++..+.+..+.||+.. |-.-+|.-
T Consensus 380 l~~~e~~~dr~-lise~~~its~~iS~d~k---------~~LvnL~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg 449 (519)
T KOG0293|consen 380 LYNREARVDRG-LISEEQPITSFSISKDGK---------LALVNLQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGG 449 (519)
T ss_pred eechhhhhhhc-cccccCceeEEEEcCCCc---------EEEEEcccCeeEEeecchhhHHHHhhcccccceEEEeccCC
Confidence 99987654433 233456899999999886 5666667889999999988888888898754 33445654
Q ss_pred -CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCC-CEEEEEECCCeEEEEEe
Q 010759 441 -TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEG-DKIAACFANHTVCVLDF 500 (502)
Q Consensus 441 -dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g-~~la~~~~~~~v~v~~~ 500 (502)
+..++|+||.|+.|+||+..+|+++.++.|+. .|++++|+|.. ..+|+|+.||+|+||..
T Consensus 450 ~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~~p~m~ASasDDgtIRIWg~ 512 (519)
T KOG0293|consen 450 GNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPADPEMFASASDDGTIRIWGP 512 (519)
T ss_pred CCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCCCHHHhhccCCCCeEEEecC
Confidence 44899999999999999999999999999876 49999999976 58899999999999964
No 60
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-31 Score=226.57 Aligned_cols=280 Identities=24% Similarity=0.387 Sum_probs=232.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEEC-CCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
+|..+++.+.++.+|.+|+|++.|.++.||-. +++.+-++.+|+++|+++...-+..++++|++|.++++||+.+++.+
T Consensus 8 GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~t~kLWDv~tGk~l 87 (327)
T KOG0643|consen 8 GHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQTAKLWDVETGKQL 87 (327)
T ss_pred cCccccceEEecCCCcEEEEecCCCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccceeEEEEcCCCcEE
Confidence 46788999999999999999999999999975 88889999999999999999999999999999999999999999988
Q ss_pred EEeeecccCeEEEecCCCceEEEEc------CCCeEEEEEcC-------CCcceeeecCCCcceeEEEEcCCCCEEEEEe
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSS------TDNMIYVCKIG-------ENRPIKTFAGHQGEVNCVKWDPTGSLLASCS 356 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~------~d~~i~~~~~~-------~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs 356 (502)
.++.. ..++..++|.....++..+ ..+.|.+++++ ...|+..+..+...++.+-|.|-+++|++|.
T Consensus 88 a~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Gh 166 (327)
T KOG0643|consen 88 ATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGH 166 (327)
T ss_pred EEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeeeecccCCEEEEec
Confidence 87765 3456667775443333332 23568888887 4567777888889999999999999999999
Q ss_pred CCCcEEEEeCCCCc-eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEE
Q 010759 357 DDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS 435 (502)
Q Consensus 357 ~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 435 (502)
.||.|.+||+++++ .+..-+.|...|+.++++|+.. ++++||.|.+-++||.++.+++.++. ...||++
T Consensus 167 e~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T---------~FiT~s~Dttakl~D~~tl~v~Kty~-te~PvN~ 236 (327)
T KOG0643|consen 167 EDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRT---------YFITGSKDTTAKLVDVRTLEVLKTYT-TERPVNT 236 (327)
T ss_pred CCCcEEEEEcccCceeeechhhhccccccccccCCcc---------eEEecccCccceeeeccceeeEEEee-ecccccc
Confidence 99999999999974 5566678999999999999986 89999999999999999999998887 4579999
Q ss_pred EEECCCCCEEEEEeCCCc--EEEEeCCCCee------------EEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 436 LAFSPTGEYLASGSLDKS--MHIWSLKEGKI------------VKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~--i~iw~~~~~~~------------~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+++|.-.+++.||.... |.-=..+.|+. +..+.+ -++|++++|||+|+..++|+.||.|+|+-|
T Consensus 237 aaisP~~d~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhPdGksYsSGGEDG~VR~h~F 316 (327)
T KOG0643|consen 237 AAISPLLDHVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHPDGKSYSSGGEDGYVRLHHF 316 (327)
T ss_pred eecccccceEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECCCCcccccCCCCceEEEEEe
Confidence 999998888777665432 22223333432 222333 367999999999999999999999999866
Q ss_pred e
Q 010759 501 R 501 (502)
Q Consensus 501 ~ 501 (502)
.
T Consensus 317 d 317 (327)
T KOG0643|consen 317 D 317 (327)
T ss_pred c
Confidence 4
No 61
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=1.3e-31 Score=266.78 Aligned_cols=272 Identities=30% Similarity=0.521 Sum_probs=242.3
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEe-ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~-~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
+...+.+..|. ..++++++.+++|++|+.. +..... +.+|.+.|++++|...+..+++|+.|+++++||..++++.
T Consensus 207 ~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~i~~~l~GH~g~V~~l~~~~~~~~lvsgS~D~t~rvWd~~sg~C~ 284 (537)
T KOG0274|consen 207 DDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYLILTRLVGHFGGVWGLAFPSGGDKLVSGSTDKTERVWDCSTGECT 284 (537)
T ss_pred Ccchhhhheee--cCeEEecCCCceeEEeecccceEEEeeccCCCCCceeEEEecCCCEEEEEecCCcEEeEecCCCcEE
Confidence 34567888888 5689999999999999975 444445 8999999999999887889999999999999999999999
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
..+.+|...+.+++... ..+++++.|.+|++|++.++..+..+.+|.++|.++.++ +.++++|+.|++|++||..++
T Consensus 285 ~~l~gh~stv~~~~~~~-~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~--~~~lvsgs~d~~v~VW~~~~~ 361 (537)
T KOG0274|consen 285 HSLQGHTSSVRCLTIDP-FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD--EPLLVSGSYDGTVKVWDPRTG 361 (537)
T ss_pred EEecCCCceEEEEEccC-ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec--CCEEEEEecCceEEEEEhhhc
Confidence 99999999888776543 346668999999999999999999999999999999997 889999999999999999999
Q ss_pred ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 370 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
++++++++|...|+++.+.+. . .+++|+.|++|++||+++. +++.++.+|..-|+.+.+ .+++|+++
T Consensus 362 ~cl~sl~gH~~~V~sl~~~~~-~---------~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~--~~~~Lvs~ 429 (537)
T KOG0274|consen 362 KCLKSLSGHTGRVYSLIVDSE-N---------RLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLL--RDNFLVSS 429 (537)
T ss_pred eeeeeecCCcceEEEEEecCc-c---------eEEeeeeccceEeecCCchhhhhhhhcCCccccccccc--ccceeEec
Confidence 999999999999999988663 1 6899999999999999999 999999999998877765 46799999
Q ss_pred eCCCcEEEEeCCCCeeEEEEec-C-CCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010759 449 SLDKSMHIWSLKEGKIVKTYTG-N-GGIFEVCWNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 449 s~Dg~i~iw~~~~~~~~~~~~~-~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
+.|++|++||..+++.++++.+ + +.|..+++. -..+++++.++++.+||+++
T Consensus 430 ~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~ 483 (537)
T KOG0274|consen 430 SADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRS 483 (537)
T ss_pred cccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEeccc
Confidence 9999999999999999999987 3 678888886 56888889999999999974
No 62
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=4.9e-32 Score=266.44 Aligned_cols=292 Identities=21% Similarity=0.366 Sum_probs=207.7
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE--ECCCCCEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD--WNGEGTLLA 229 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~--~s~~~~~l~ 229 (502)
+|.+.|.++.||+||+||||||.|+.|+||.+.............-.+.. ... ......++..-. ........-
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~--~~~--~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYF--EYN--ANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhh--hhh--hccccCccccccccccccccccc
Confidence 79999999999999999999999999999998653221100000000000 000 000000110000 000001111
Q ss_pred EEECCCcEEE----EECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 230 TGSYDGQARI----WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 230 sg~~dg~i~i----w~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
.+.....+.+ +-......+.+.+|.+.|..|.|+.+ ++|+++|+|+|||+|++...+++..|
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F------------- 406 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVF------------- 406 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEE-------------
Confidence 1222222221 22334567789999999999999976 58999999999999999876655433
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
.|...|+||+|+| |.++|++|+.||.||||++...+.+.-.. ...-|++
T Consensus 407 -----------------------------~HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITA 456 (712)
T KOG0283|consen 407 -----------------------------SHNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKKVVDWND-LRDLITA 456 (712)
T ss_pred -----------------------------ecCCeeEEEEecccCCCcEeecccccceEEeecCcCeeEeehh-hhhhhee
Confidence 3888999999999 67899999999999999998776654433 3478999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CC------CCCEEEEEECCCCC-EEEEEeCCCcEE
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GH------REPVYSLAFSPTGE-YLASGSLDKSMH 455 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h------~~~v~~l~~spdg~-~lasgs~Dg~i~ 455 (502)
++|.|+|. +.+.|+.+|.+++|+....+...... -| ...|+.+.|.|... -|+..+.|..|+
T Consensus 457 vcy~PdGk---------~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIR 527 (712)
T KOG0283|consen 457 VCYSPDGK---------GAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIR 527 (712)
T ss_pred EEeccCCc---------eEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEEecCCCceE
Confidence 99999997 67789999999999998777654431 11 12799999998643 466668899999
Q ss_pred EEeCCCCeeEEEEecCC---CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 456 IWSLKEGKIVKTYTGNG---GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~---~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
|||.++..++..|.+.. .=...+|+.||++|++++.|..|+||+.
T Consensus 528 I~d~~~~~lv~KfKG~~n~~SQ~~Asfs~Dgk~IVs~seDs~VYiW~~ 575 (712)
T KOG0283|consen 528 IYDGRDKDLVHKFKGFRNTSSQISASFSSDGKHIVSASEDSWVYIWKN 575 (712)
T ss_pred EEeccchhhhhhhcccccCCcceeeeEccCCCEEEEeecCceEEEEeC
Confidence 99998888888887632 2356789999999999999999999986
No 63
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=5.7e-32 Score=230.09 Aligned_cols=275 Identities=23% Similarity=0.396 Sum_probs=222.2
Q ss_pred EEEEECC--CCCEEEEE------ECCCcEEEEECC-CceeEee--cCCCCCEEEEEecCCC-CEEEEecCCCeEEEEecc
Q 010759 217 TTLDWNG--EGTLLATG------SYDGQARIWSTN-GDLKCTL--SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 217 ~~l~~s~--~~~~l~sg------~~dg~i~iw~~~-~~~~~~~--~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~ 284 (502)
.++.||| ++++.+.+ ...|.+.|-+.. ..-+..+ ..-...++.++|++.. +.+++++.||++++||+.
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi~e~~s~d~~D~LfdV~Wse~~e~~~~~a~GDGSLrl~d~~ 91 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGIQECQSYDTEDGLFDVAWSENHENQVIAASGDGSLRLFDLT 91 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCeEEEEeeecccceeEeeecCCCcceEEEEecCceEEEeccC
Confidence 4667777 33332222 235788888874 2222111 2245789999999865 678999999999999964
Q ss_pred C-cceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCc
Q 010759 285 T-EEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVT 360 (502)
Q Consensus 285 ~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~ 360 (502)
. ...+..+.-|...|.+++|. ....+++++-|++|++|+..-+..+++|.||...|...+|+|. .++++++|.|++
T Consensus 92 ~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~ 171 (311)
T KOG0277|consen 92 MPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGT 171 (311)
T ss_pred CCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCce
Confidence 3 23566778899999999995 4567889999999999999988999999999999999999995 689999999999
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEEC
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~s 439 (502)
+++||++.......+..|..++.++.|+.-.. .+|+||+.|+.||+||+++- .++.++.+|.-.|..|+||
T Consensus 172 l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~--------~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~S 243 (311)
T KOG0277|consen 172 LRLWDVRSPGKFMSIEAHNSEILCCDWSKYNH--------NVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFS 243 (311)
T ss_pred EEEEEecCCCceeEEEeccceeEeecccccCC--------cEEEecCCCceEEEEehhhccccceeecCCceEEEEEecC
Confidence 99999986544444788999999999986543 58999999999999999865 4688999999999999999
Q ss_pred CCC-CEEEEEeCCCcEEEEeCCCC-eeEEEEecCCC-EEEEEECC-CCCEEEEEECCCeEEEEE
Q 010759 440 PTG-EYLASGSLDKSMHIWSLKEG-KIVKTYTGNGG-IFEVCWNK-EGDKIAACFANHTVCVLD 499 (502)
Q Consensus 440 pdg-~~lasgs~Dg~i~iw~~~~~-~~~~~~~~~~~-i~~~~ws~-~g~~la~~~~~~~v~v~~ 499 (502)
|.. ..||++|.|-+++||+...+ ..+.++..+.. +.++.||+ ++.++|.++.|+.++||+
T Consensus 244 ph~~~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~ 307 (311)
T KOG0277|consen 244 PHHASLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWN 307 (311)
T ss_pred cchhhHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeec
Confidence 975 68999999999999999854 34555655555 67899998 677999999999999998
No 64
>KOG0274 consensus Cdc4 and related F-box and WD-40 proteins [General function prediction only]
Probab=100.00 E-value=3.3e-31 Score=264.00 Aligned_cols=285 Identities=29% Similarity=0.477 Sum_probs=248.8
Q ss_pred eccc-cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 149 ILEG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 149 ~l~~-H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.+.+ |...|.+..|+ +.++++++.|++|++|+..++.. ......+|.+.|.++++..-+.+
T Consensus 202 ~~~~~~~~~~~~~q~~--~~~~~~~s~~~tl~~~~~~~~~~----------------i~~~l~GH~g~V~~l~~~~~~~~ 263 (537)
T KOG0274|consen 202 VLLGTDDHVVLCLQLH--DGFFKSGSDDSTLHLWDLNNGYL----------------ILTRLVGHFGGVWGLAFPSGGDK 263 (537)
T ss_pred eecccCcchhhhheee--cCeEEecCCCceeEEeecccceE----------------EEeeccCCCCCceeEEEecCCCE
Confidence 3444 56778888888 67899999999999999876531 12224467889999999988899
Q ss_pred EEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 228 LATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+++|+.|.++++||.. +.+..++.+|.+.|.++...+ .++++||.|.+|++|++.++.++..+..|.++|.++...
T Consensus 264 lvsgS~D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~--~~~~sgs~D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~- 340 (537)
T KOG0274|consen 264 LVSGSTDKTERVWDCSTGECTHSLQGHTSSVRCLTIDP--FLLVSGSRDNTVKVWDVTNGACLNLLRGHTGPVNCVQLD- 340 (537)
T ss_pred EEEEecCCcEEeEecCCCcEEEEecCCCceEEEEEccC--ceEeeccCCceEEEEeccCcceEEEeccccccEEEEEec-
Confidence 9999999999999975 577889999999999987654 578899999999999999999999999999999999987
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceeeecccCCCcEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTI 385 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~ 385 (502)
...+++++.|++|.+|+....+++..+.||.+.|.++.+.+. ..+++|+.|++|++||+.+. +++..+..|...+..+
T Consensus 341 ~~~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l 419 (537)
T KOG0274|consen 341 EPLLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSL 419 (537)
T ss_pred CCEEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCccccccc
Confidence 667888899999999999999999999999999999988654 88999999999999999999 9999999999888776
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
.+... +|++++.|++|++||...++++.++.+ |...|+.+++. ...+++++.||++++||+++++.
T Consensus 420 ~~~~~-----------~Lvs~~aD~~Ik~WD~~~~~~~~~~~~~~~~~v~~l~~~--~~~il~s~~~~~~~l~dl~~~~~ 486 (537)
T KOG0274|consen 420 LLRDN-----------FLVSSSADGTIKLWDAEEGECLRTLEGRHVGGVSALALG--KEEILCSSDDGSVKLWDLRSGTL 486 (537)
T ss_pred ccccc-----------eeEeccccccEEEeecccCceeeeeccCCcccEEEeecC--cceEEEEecCCeeEEEecccCch
Confidence 65332 689999999999999999999999998 77899999887 56889999999999999999988
Q ss_pred EEEE
Q 010759 465 VKTY 468 (502)
Q Consensus 465 ~~~~ 468 (502)
.+.+
T Consensus 487 ~~~l 490 (537)
T KOG0274|consen 487 IRTL 490 (537)
T ss_pred hhhh
Confidence 7755
No 65
>KOG0277 consensus Peroxisomal targeting signal type 2 receptor [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=1.6e-31 Score=227.35 Aligned_cols=279 Identities=23% Similarity=0.400 Sum_probs=226.2
Q ss_pred eEEEECCC-CCEEEEEe-------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC-CCEE
Q 010759 158 CACAWSPA-GSLLASGS-------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLL 228 (502)
Q Consensus 158 ~~~~~spd-~~~l~sgs-------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~~~l 228 (502)
.++.|||- .++||.+. ..|++.|-++..+..+ .....+ .-...+..++|++. ...+
T Consensus 12 ysvqfSPf~~nrLavAt~q~yGl~G~G~L~ile~~~~~gi----------~e~~s~-----d~~D~LfdV~Wse~~e~~~ 76 (311)
T KOG0277|consen 12 YSVQFSPFVENRLAVATAQHYGLAGNGRLFILEVTDPKGI----------QECQSY-----DTEDGLFDVAWSENHENQV 76 (311)
T ss_pred ceeEecccccchhheeehhhcccccCceEEEEecCCCCCe----------EEEEee-----ecccceeEeeecCCCcceE
Confidence 57889994 33333321 4678888887533211 111111 12467899999985 4688
Q ss_pred EEEECCCcEEEEECC--CceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 229 ATGSYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
++++.||.++|||.. ...+..++.|...|+++.|++.. ..++++|.|++|++|+.....-+++|.+|...+....|.
T Consensus 77 ~~a~GDGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~s 156 (311)
T KOG0277|consen 77 IAASGDGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPNSVQTFNGHNSCIYQAAFS 156 (311)
T ss_pred EEEecCceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCcceEeecCCccEEEEEecC
Confidence 899999999999964 34566788999999999999855 468889999999999999888899999999999988885
Q ss_pred --CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc-eeeecccCCCc
Q 010759 306 --NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKE 381 (502)
Q Consensus 306 --~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~ 381 (502)
....|++++.|+++++||++.......+..|..+|.|+.|+. +...++||+.|+.|++||++.-+ ++..+.+|.-.
T Consensus 157 p~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~A 236 (311)
T KOG0277|consen 157 PHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLA 236 (311)
T ss_pred CCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceE
Confidence 456899999999999999987655556889999999999986 56789999999999999998754 57788899999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEeC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPT-GEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd-g~~lasgs~Dg~i~iw~~ 459 (502)
|..++|||... .+|+|++.|=++||||...+ ..+.+...|+..|..+.||+- +.++|+++.|..++||+.
T Consensus 237 VRkvk~Sph~~--------~lLaSasYDmT~riw~~~~~ds~~e~~~~HtEFv~g~Dws~~~~~~vAs~gWDe~l~Vw~p 308 (311)
T KOG0277|consen 237 VRKVKFSPHHA--------SLLASASYDMTVRIWDPERQDSAIETVDHHTEFVCGLDWSLFDPGQVASTGWDELLYVWNP 308 (311)
T ss_pred EEEEecCcchh--------hHhhhccccceEEecccccchhhhhhhhccceEEeccccccccCceeeecccccceeeecc
Confidence 99999999865 38999999999999998844 455667789999999999984 679999999999999984
No 66
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=100.00 E-value=2.3e-31 Score=232.43 Aligned_cols=304 Identities=23% Similarity=0.409 Sum_probs=238.6
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCC---------CCCCCCCCceEEEEEeeecccccC
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTS---------NGGAQNGPLNVLVLKHVKGRTNEK 212 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~ 212 (502)
.+.-....+..|+.++++.+|||||.++||||.|..|+|.|++.... ....+.+| +++. .-.|
T Consensus 100 ~~~yEt~ylt~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hP----vIRT----lYDH 171 (430)
T KOG0640|consen 100 PSEYETKYLTSHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHP----VIRT----LYDH 171 (430)
T ss_pred CcccceEEEeecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCc----eEee----hhhc
Confidence 34445677889999999999999999999999999999999873211 01111112 2222 2346
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCce-eE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL-KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~-~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
...|.++.|+|....|++|+.|++|+++|..... +. .......+|.++.|+|.|.+|+.|..--++++||++|-++-
T Consensus 172 ~devn~l~FHPre~ILiS~srD~tvKlFDfsK~saKrA~K~~qd~~~vrsiSfHPsGefllvgTdHp~~rlYdv~T~Qcf 251 (430)
T KOG0640|consen 172 VDEVNDLDFHPRETILISGSRDNTVKLFDFSKTSAKRAFKVFQDTEPVRSISFHPSGEFLLVGTDHPTLRLYDVNTYQCF 251 (430)
T ss_pred cCcccceeecchhheEEeccCCCeEEEEecccHHHHHHHHHhhccceeeeEeecCCCceEEEecCCCceeEEeccceeEe
Confidence 7889999999999999999999999999976421 11 11224568999999999999999999999999999876531
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
+++. .-.+|++.|++|.+++.|++.++||.||.|+|||--++
T Consensus 252 ---------------------vsan-----------------Pd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~ 293 (430)
T KOG0640|consen 252 ---------------------VSAN-----------------PDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSN 293 (430)
T ss_pred ---------------------eecC-----------------cccccccceeEEEecCCccEEEEeccCCcEEeeccccH
Confidence 1111 11368999999999999999999999999999999999
Q ss_pred ceeeecc-cCC-CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----CCEEEEEECCCC
Q 010759 370 KYVHDLR-EHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----EPVYSLAFSPTG 442 (502)
Q Consensus 370 ~~~~~~~-~~~-~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg 442 (502)
+++.++. +|. ..|.+..|..+++ ++++.+.|..+++|.+.+++++.++.|-. ..-+...|+...
T Consensus 294 rCv~t~~~AH~gsevcSa~Ftkn~k---------yiLsSG~DS~vkLWEi~t~R~l~~YtGAg~tgrq~~rtqAvFNhtE 364 (430)
T KOG0640|consen 294 RCVRTIGNAHGGSEVCSAVFTKNGK---------YILSSGKDSTVKLWEISTGRMLKEYTGAGTTGRQKHRTQAVFNHTE 364 (430)
T ss_pred HHHHHHHhhcCCceeeeEEEccCCe---------EEeecCCcceeeeeeecCCceEEEEecCCcccchhhhhhhhhcCcc
Confidence 9998875 354 4688889998886 88899999999999999999999887641 123556787777
Q ss_pred CEEEEEe-CCCcEEEEeCCCCeeEEEE--ecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 443 EYLASGS-LDKSMHIWSLKEGKIVKTY--TGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 443 ~~lasgs-~Dg~i~iw~~~~~~~~~~~--~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.|++.-. ..+.+.-||.+++..+..+ .+++.+..+.-||.+--+++|+.|..+++|=-
T Consensus 365 dyVl~pDEas~slcsWdaRtadr~~l~slgHn~a~R~i~HSP~~p~FmTcsdD~raRFWyr 425 (430)
T KOG0640|consen 365 DYVLFPDEASNSLCSWDARTADRVALLSLGHNGAVRWIVHSPVEPAFMTCSDDFRARFWYR 425 (430)
T ss_pred ceEEccccccCceeeccccchhhhhhcccCCCCCceEEEeCCCCCceeeecccceeeeeee
Confidence 7766533 3577999999987665444 45778899999999999999999999999953
No 67
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=100.00 E-value=4.2e-32 Score=230.27 Aligned_cols=282 Identities=25% Similarity=0.411 Sum_probs=239.6
Q ss_pred eccccccceeEEEECC---CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 149 ILEGHTSEVCACAWSP---AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 149 ~l~~H~~~V~~~~~sp---d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
+..||+.+|-.++||| +|-+|.|++.|+.-.+-+=.+|.. .+...+|.+.|+......+.
T Consensus 9 ~c~ghtrpvvdl~~s~itp~g~flisa~kd~~pmlr~g~tgdw-----------------igtfeghkgavw~~~l~~na 71 (334)
T KOG0278|consen 9 TCHGHTRPVVDLAFSPITPDGYFLISASKDGKPMLRNGDTGDW-----------------IGTFEGHKGAVWSATLNKNA 71 (334)
T ss_pred EEcCCCcceeEEeccCCCCCceEEEEeccCCCchhccCCCCCc-----------------EEeeeccCcceeeeecCchh
Confidence 5679999999999986 788999999999766655444432 23344568899999999999
Q ss_pred CEEEEEECCCcEEEEEC-CCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 226 TLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
...++++.|-+.+|||. .+..+.+| .|+.-|.+++|+.+.++|++|+.++.+||||++..+
T Consensus 72 ~~aasaaadftakvw~a~tgdelhsf-~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~----------------- 133 (334)
T KOG0278|consen 72 TRAASAAADFTAKVWDAVTGDELHSF-EHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPK----------------- 133 (334)
T ss_pred hhhhhhcccchhhhhhhhhhhhhhhh-hhhheeeeEEecccchhhhccchHHHhhhhhccCCC-----------------
Confidence 99999999999999995 45555555 488899999999999999999999999999987542
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
.|...+.+|.+.|..+-|....+.|++.++|++||+||.+++..++++.. ..+|++
T Consensus 134 -----------------------App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~-~s~VtS 189 (334)
T KOG0278|consen 134 -----------------------APPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF-NSPVTS 189 (334)
T ss_pred -----------------------CCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec-CCCCcc
Confidence 34567889999999999988888999999999999999999999988864 467899
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
+..+++|. +++-...+.|++||..+..++..++ -...|.+.+.+|+..++++|+.|+.++.||..+|.-
T Consensus 190 lEvs~dG~----------ilTia~gssV~Fwdaksf~~lKs~k-~P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeE 258 (334)
T KOG0278|consen 190 LEVSQDGR----------ILTIAYGSSVKFWDAKSFGLLKSYK-MPCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEE 258 (334)
T ss_pred eeeccCCC----------EEEEecCceeEEeccccccceeecc-CccccccccccCCCceEEecCcceEEEEEeccCCce
Confidence 99999996 4566677899999999888877665 334689999999999999999999999999999988
Q ss_pred EEEE-ec-CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 465 VKTY-TG-NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 465 ~~~~-~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+..+ .+ .++|-++.|+|||...|+|+.||+|++|..
T Consensus 259 i~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt 296 (334)
T KOG0278|consen 259 IGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQT 296 (334)
T ss_pred eeecccCCCCceEEEEECCCCceeeccCCCceEEEEEe
Confidence 8776 44 567999999999999999999999999963
No 68
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=100.00 E-value=1.3e-30 Score=249.98 Aligned_cols=335 Identities=23% Similarity=0.408 Sum_probs=266.8
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.++.||.+.|+++-|+|.+..|+|+|+|.++.+|.-.+.. .+.+.. ...+...+....-....|+|+++.
T Consensus 261 all~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~t--------GiWv~~--vRlGe~gg~a~GF~g~lw~~n~~~ 330 (764)
T KOG1063|consen 261 ALLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENT--------GIWVDV--VRLGEVGGSAGGFWGGLWSPNSNV 330 (764)
T ss_pred hhhcCcccceEEEEEccchhhheecccCcceEEEecCCcc--------ceEEEE--EEeecccccccceeeEEEcCCCCE
Confidence 3567999999999999999999999999999999854321 112222 222333344567889999999999
Q ss_pred EEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc--CcceeE--EeeecccCe
Q 010759 228 LATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--TEEWKQ--QFEFHSGPT 299 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~--~~~~~~--~~~~~~~~~ 299 (502)
+++-++.|..++|.... .....+.+|.+.|..+.|+|.|.+|++.|.|.|-|++-.- ..+|+. ....|....
T Consensus 331 ii~~g~~Gg~hlWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl 410 (764)
T KOG1063|consen 331 IIAHGRTGGFHLWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDL 410 (764)
T ss_pred EEEecccCcEEEEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccc
Confidence 99999999999998433 2334678999999999999999999999999999999654 112322 234567777
Q ss_pred EEEecCC-CceEEEEcCCCeEEEEEcCCC--------------------------------cc-----------------
Q 010759 300 LDVDWRN-NVSFATSSTDNMIYVCKIGEN--------------------------------RP----------------- 329 (502)
Q Consensus 300 ~~~~~~~-~~~~~~~~~d~~i~~~~~~~~--------------------------------~~----------------- 329 (502)
.++.+.+ +.+|+++...+.+++++.... ++
T Consensus 411 ~c~~~vn~~~~FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~e 490 (764)
T KOG1063|consen 411 TCLSFVNEDLQFVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAE 490 (764)
T ss_pred eeeehccCCceeeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeee
Confidence 8888877 888999999888888764210 00
Q ss_pred ---------------------------eeeecCCCcceeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCceeeeccc
Q 010759 330 ---------------------------IKTFAGHQGEVNCVKWDPTGSLLASCSDDV-----TAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 330 ---------------------------~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-----~i~iwd~~~~~~~~~~~~ 377 (502)
+..+.||..+|.+++.+|+|+++||+.... .|++|+..+...++.+..
T Consensus 491 t~~~~~p~~L~ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~ 570 (764)
T KOG1063|consen 491 TPLAAAPCELTEPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEG 570 (764)
T ss_pred cccccCchhccCCChHHHHHHhccchhhHHhccCceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecc
Confidence 012458999999999999999999998754 589999999998899999
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE----EEEeeCCCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL----LYSLNGHREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
|.-.|+.++|||++. +|++.|.|.++.+|....... ....+.|+..|++..|+|++.++||+|.|++
T Consensus 571 HsLTVT~l~FSpdg~---------~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~ 641 (764)
T KOG1063|consen 571 HSLTVTRLAFSPDGR---------YLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKK 641 (764)
T ss_pred cceEEEEEEECCCCc---------EEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCce
Confidence 999999999999997 899999999999998754322 2236789999999999999999999999999
Q ss_pred EEEEeCCCC--eeEE---EEecCCCEEEEEECCC-----CCEEEEEECCCeEEEEEee
Q 010759 454 MHIWSLKEG--KIVK---TYTGNGGIFEVCWNKE-----GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 454 i~iw~~~~~--~~~~---~~~~~~~i~~~~ws~~-----g~~la~~~~~~~v~v~~~~ 501 (502)
|++|...+. +.+. .......|++++|.|- +..+|+|...|.|.||.+.
T Consensus 642 VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~~~~~e~~~~vavGle~GeI~l~~~~ 699 (764)
T KOG1063|consen 642 VKVWEEPDLRDKYISRFACLKFSLAVTAVAYLPVDHNEKGDVVAVGLEKGEIVLWRRK 699 (764)
T ss_pred EEEEeccCchhhhhhhhchhccCCceeeEEeeccccccccceEEEEecccEEEEEecc
Confidence 999998876 3322 2344567899998773 3488999999999999865
No 69
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=100.00 E-value=4.1e-29 Score=209.17 Aligned_cols=294 Identities=26% Similarity=0.396 Sum_probs=236.7
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCC---CCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQ---NGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
-+..|.+++|+|.|.+.|.||...+.+|--...-....... ..|-.+.+. +...|.+.|+|.+|||.|.+++
T Consensus 31 dsqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~k-----r~khhkgsiyc~~ws~~gelia 105 (350)
T KOG0641|consen 31 DSQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCK-----RNKHHKGSIYCTAWSPCGELIA 105 (350)
T ss_pred chhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEee-----eccccCccEEEEEecCccCeEE
Confidence 45679999999999999999999999987543321111111 111112211 2234578899999999999999
Q ss_pred EEECCCcEEEEECCCc------eeEeecCCCCCEEEEEecCC----CCEEEEec-CCCeEEEEeccCcceeEEeeecccC
Q 010759 230 TGSYDGQARIWSTNGD------LKCTLSKHKGPIFSLKWNKK----GDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~------~~~~~~~h~~~V~~l~~~~~----~~~l~sgs-~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
+|+.|.+|++.-.+.. ....|.-|.+.|..++|-.+ +..|++++ .|..|++-|..+++-.+.+.+|.+.
T Consensus 106 tgsndk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtgh 185 (350)
T KOG0641|consen 106 TGSNDKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGH 185 (350)
T ss_pred ecCCCceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCccc
Confidence 9999999999865432 23467789999999999643 34566544 4677777788889888899999999
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC--C-----CcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--H-----QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--h-----~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
++++..-++..|++++.|.+|++|+++-+..+.++.. | .+.|.+++..|.|++|++|..|....+||++.+++
T Consensus 186 ilalyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~ 265 (350)
T KOG0641|consen 186 ILALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRM 265 (350)
T ss_pred EEEEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCce
Confidence 9998777788899999999999999998887776542 2 25689999999999999999999999999999999
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC----eEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----KLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
++.+..|...|.++.|+|.. +||++|+.|..|++-|+.-. -++.....|...+..+.|+|..--+++
T Consensus 266 iq~f~phsadir~vrfsp~a---------~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfis 336 (350)
T KOG0641|consen 266 IQRFHPHSADIRCVRFSPGA---------HYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFIS 336 (350)
T ss_pred eeeeCCCccceeEEEeCCCc---------eEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeee
Confidence 99999999999999999975 48999999999999998632 234456679999999999999988999
Q ss_pred EeCCCcEEEEeCC
Q 010759 448 GSLDKSMHIWSLK 460 (502)
Q Consensus 448 gs~Dg~i~iw~~~ 460 (502)
.|.|.++.+|-+.
T Consensus 337 ssadkt~tlwa~~ 349 (350)
T KOG0641|consen 337 SSADKTATLWALN 349 (350)
T ss_pred ccCcceEEEeccC
Confidence 9999999999764
No 70
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=100.00 E-value=6.3e-31 Score=243.09 Aligned_cols=274 Identities=22% Similarity=0.395 Sum_probs=234.5
Q ss_pred CCCeEEEEECCCCCE-EEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 213 SKDVTTLDWNGEGTL-LATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~-l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
...|.+++|||...+ +++++ .-.+.||+..+. ....+...+..|+++.|..||..|++|...|.|+++|+.+...+.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~-S~rvqly~~~~~~~~k~~srFk~~v~s~~fR~DG~LlaaGD~sG~V~vfD~k~r~iLR 104 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTS-SVRVQLYSSVTRSVRKTFSRFKDVVYSVDFRSDGRLLAAGDESGHVKVFDMKSRVILR 104 (487)
T ss_pred cCcceeEecCCCCCCceEEec-ccEEEEEecchhhhhhhHHhhccceeEEEeecCCeEEEccCCcCcEEEeccccHHHHH
Confidence 467999999996544 33333 357888987653 334567778899999999999999999999999999988877788
Q ss_pred EeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCC
Q 010759 291 QFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~ 367 (502)
.+..|+.|+..+.|. ++..|+++++|+.+.+|++.+......+.+|+..|.|.+|+|-. .+++|||.||+|++||++
T Consensus 105 ~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~DtR 184 (487)
T KOG0310|consen 105 QLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDTR 184 (487)
T ss_pred HHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEec
Confidence 889999999888874 56788999999999999999988766889999999999999964 589999999999999999
Q ss_pred CC-ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEE
Q 010759 368 QD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYL 445 (502)
Q Consensus 368 ~~-~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~l 445 (502)
.. ..+.++ .|..+|-.+.+-|.|+ ++++++. +.|++||+-+| +.+..+..|...|+|+++..+++.|
T Consensus 185 ~~~~~v~el-nhg~pVe~vl~lpsgs---------~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rL 253 (487)
T KOG0310|consen 185 SLTSRVVEL-NHGCPVESVLALPSGS---------LIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRL 253 (487)
T ss_pred cCCceeEEe-cCCCceeeEEEcCCCC---------EEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceE
Confidence 77 555555 5889999999999886 6777764 58999999855 4555555699999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 446 ASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
++||-|+.|++|++.+.+++..+.-.++|.+++.+|+++.+++|..||.+.+-
T Consensus 254 lS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~dd~t~viGmsnGlv~~r 306 (487)
T KOG0310|consen 254 LSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPDDQTVVIGMSNGLVSIR 306 (487)
T ss_pred eecccccceEEEEccceEEEEeeecccceeeEEecCCCceEEEecccceeeee
Confidence 99999999999999999999999989999999999999999999999987653
No 71
>KOG0643 consensus Translation initiation factor 3, subunit i (eIF-3i)/TGF-beta receptor-interacting protein (TRIP-1) [Translation, ribosomal structure and biogenesis; Signal transduction mechanisms]
Probab=100.00 E-value=3.9e-31 Score=226.57 Aligned_cols=287 Identities=20% Similarity=0.320 Sum_probs=228.3
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..|.||..+++.+.|+.+|.+|+|++.|.++.+|--.+|. ..+.+.+|.+.|+|++..-+.++
T Consensus 4 i~l~GHERplTqiKyN~eGDLlFscaKD~~~~vw~s~nGe-----------------rlGty~GHtGavW~~Did~~s~~ 66 (327)
T KOG0643|consen 4 ILLQGHERPLTQIKYNREGDLLFSCAKDSTPTVWYSLNGE-----------------RLGTYDGHTGAVWCCDIDWDSKH 66 (327)
T ss_pred cccccCccccceEEecCCCcEEEEecCCCCceEEEecCCc-----------------eeeeecCCCceEEEEEecCCcce
Confidence 3578999999999999999999999999999999754443 22456678999999999999999
Q ss_pred EEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecC-----CCeEEEEecc-------CcceeEEeeec
Q 010759 228 LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-----DKTAIVWDVK-------TEEWKQQFEFH 295 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-----D~~v~iwd~~-------~~~~~~~~~~~ 295 (502)
+++|+.|.++++||.........-....+|..+.|+++|++++.+.. -+.|.++|++ ..+....+..+
T Consensus 67 liTGSAD~t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~ 146 (327)
T KOG0643|consen 67 LITGSADQTAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTP 146 (327)
T ss_pred eeeccccceeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCC
Confidence 99999999999999875544444456789999999999998876643 3679999987 33444455556
Q ss_pred ccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCc-ceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee
Q 010759 296 SGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENR-PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 373 (502)
Q Consensus 296 ~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~-~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~ 373 (502)
...+...-|.. +..++++..++.|..|+..++. .+..-..|...|+.++++||..+++++|.|.+.++||..+-..+.
T Consensus 147 ~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT~s~Dttakl~D~~tl~v~K 226 (327)
T KOG0643|consen 147 DSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFITGSKDTTAKLVDVRTLEVLK 226 (327)
T ss_pred ccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEecccCccceeeeccceeeEE
Confidence 66677777754 4567889999999999999874 455556799999999999999999999999999999999988888
Q ss_pred ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC-eEEEEeCCCC------------eEEEEeeCCCCCEEEEEECC
Q 010759 374 DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-TVKLWDVELG------------KLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 374 ~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~~~------------~~~~~~~~h~~~v~~l~~sp 440 (502)
++.. ..++++.+++|... .+++.|+.+- .|.-=..+.| +.+..+++|-+||++|+|||
T Consensus 227 ty~t-e~PvN~aaisP~~d--------~VilgGGqeA~dVTTT~~r~GKFEArFyh~i~eEEigrvkGHFGPINsvAfhP 297 (327)
T KOG0643|consen 227 TYTT-ERPVNTAAISPLLD--------HVILGGGQEAMDVTTTSTRAGKFEARFYHLIFEEEIGRVKGHFGPINSVAFHP 297 (327)
T ss_pred Eeee-cccccceecccccc--------eEEecCCceeeeeeeecccccchhhhHHHHHHHHHhccccccccCcceeEECC
Confidence 7753 56889999988653 3454444432 1221122222 34556789999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 010759 441 TGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~ 460 (502)
+|+..++|+.||.|++....
T Consensus 298 dGksYsSGGEDG~VR~h~Fd 317 (327)
T KOG0643|consen 298 DGKSYSSGGEDGYVRLHHFD 317 (327)
T ss_pred CCcccccCCCCceEEEEEec
Confidence 99999999999999998654
No 72
>PLN00181 protein SPA1-RELATED; Provisional
Probab=100.00 E-value=5.9e-30 Score=274.66 Aligned_cols=238 Identities=21% Similarity=0.359 Sum_probs=199.7
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc---------eeEeecCCCCCEEEEEecCC-CCEEEEecCCCeEE
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---------LKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAI 279 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~---------~~~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~ 279 (502)
..|...|.+++|+|+|.+|++|+.|+.|+||+.... ....+. +...|.+++|+|. +.+|++++.||+|+
T Consensus 480 ~~~~~~V~~i~fs~dg~~latgg~D~~I~iwd~~~~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~~las~~~Dg~v~ 558 (793)
T PLN00181 480 LNSSNLVCAIGFDRDGEFFATAGVNKKIKIFECESIIKDGRDIHYPVVELA-SRSKLSGICWNSYIKSQVASSNFEGVVQ 558 (793)
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCcccccccccccceEEec-ccCceeeEEeccCCCCEEEEEeCCCeEE
Confidence 446788999999999999999999999999996431 112222 3467899999874 67899999999999
Q ss_pred EEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCC
Q 010759 280 VWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDD 358 (502)
Q Consensus 280 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~d 358 (502)
+||+.+++. +..+.+|.+.|.+++|+| ++.+|++|+.|
T Consensus 559 lWd~~~~~~-----------------------------------------~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~D 597 (793)
T PLN00181 559 VWDVARSQL-----------------------------------------VTEMKEHEKRVWSIDYSSADPTLLASGSDD 597 (793)
T ss_pred EEECCCCeE-----------------------------------------EEEecCCCCCEEEEEEcCCCCCEEEEEcCC
Confidence 999876532 234567899999999997 78999999999
Q ss_pred CcEEEEeCCCCceeeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCCCCEEEE
Q 010759 359 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHREPVYSL 436 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l 436 (502)
|+|++||++++..+..+..+ ..+.++.|.+ ++. +|++|+.||.|++||+++.+ .+..+.+|...|+++
T Consensus 598 g~v~iWd~~~~~~~~~~~~~-~~v~~v~~~~~~g~---------~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v 667 (793)
T PLN00181 598 GSVKLWSINQGVSIGTIKTK-ANICCVQFPSESGR---------SLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYV 667 (793)
T ss_pred CEEEEEECCCCcEEEEEecC-CCeEEEEEeCCCCC---------EEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEE
Confidence 99999999998888777654 5788999954 343 78999999999999998766 567788999999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCCC------eeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 437 AFSPTGEYLASGSLDKSMHIWSLKEG------KIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 437 ~~spdg~~lasgs~Dg~i~iw~~~~~------~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.|. ++.+|++++.|++|+|||+..+ +.+.++.++. .+..++|+|+|.+||+|+.|+.|.||+.
T Consensus 668 ~f~-~~~~lvs~s~D~~ikiWd~~~~~~~~~~~~l~~~~gh~~~i~~v~~s~~~~~lasgs~D~~v~iw~~ 737 (793)
T PLN00181 668 RFV-DSSTLVSSSTDNTLKLWDLSMSISGINETPLHSFMGHTNVKNFVGLSVSDGYIATGSETNEVFVYHK 737 (793)
T ss_pred EEe-CCCEEEEEECCCEEEEEeCCCCccccCCcceEEEcCCCCCeeEEEEcCCCCEEEEEeCCCEEEEEEC
Confidence 997 7889999999999999999743 4567777654 4789999999999999999999999985
No 73
>PTZ00421 coronin; Provisional
Probab=100.00 E-value=4.5e-30 Score=255.67 Aligned_cols=276 Identities=17% Similarity=0.226 Sum_probs=208.6
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCC-CCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGG-AQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLAT 230 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l~s 230 (502)
|-..|+...+++++..+++++.+..+..|+...+..... ...+.+. .......+|.+.|++++|+| ++.+|++
T Consensus 19 ~~~~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~-----~~~~~l~GH~~~V~~v~fsP~d~~~LaS 93 (493)
T PTZ00421 19 HFLNVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLA-----SNPPILLGQEGPIIDVAFNPFDPQKLFT 93 (493)
T ss_pred ceeccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCC-----CCCceEeCCCCCEEEEEEcCCCCCEEEE
Confidence 455677788888988889999999999998654421100 0000000 00011235788999999999 8899999
Q ss_pred EECCCcEEEEECCCc--------eeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 231 GSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 231 g~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
|+.|++|++|++... ....+.+|...|.+++|+|.+ ++|++|+.|++|+|||+.++..
T Consensus 94 gS~DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVrIWDl~tg~~------------- 160 (493)
T PTZ00421 94 ASEDGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVNVWDVERGKA------------- 160 (493)
T ss_pred EeCCCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEEEEECCCCeE-------------
Confidence 999999999997532 345788999999999999986 6899999999999999987542
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
+..+.+|...|.+++|+|+|.+|++|+.|++|+|||+++++.+..+..|.+.
T Consensus 161 ----------------------------~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~ 212 (493)
T PTZ00421 161 ----------------------------VEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASA 212 (493)
T ss_pred ----------------------------EEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCC
Confidence 2345578888999999999999999999999999999999998888888764
Q ss_pred -EEEEEEccCCCCCCCCCCcEEEEEE---eCCCeEEEEeCCCCeE-EEEeeCC-CCCEEEEEECCCCCEEEEEe-CCCcE
Q 010759 382 -IYTIRWSPTGSGTNNPNQQLILASA---SFDSTVKLWDVELGKL-LYSLNGH-REPVYSLAFSPTGEYLASGS-LDKSM 454 (502)
Q Consensus 382 -i~~~~~sp~g~~~~~~~~~~~l~sg---s~dg~i~iwd~~~~~~-~~~~~~h-~~~v~~l~~spdg~~lasgs-~Dg~i 454 (502)
+..+.|.+++. .++.+| +.|+.|++||+++... +.....+ ...+....|+|++.+|++|+ .|+.|
T Consensus 213 ~~~~~~w~~~~~--------~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~I 284 (493)
T PTZ00421 213 KSQRCLWAKRKD--------LIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNI 284 (493)
T ss_pred cceEEEEcCCCC--------eEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeE
Confidence 34677887653 244433 3589999999987543 3333323 34566778999999999887 59999
Q ss_pred EEEeCCCCeeEEEEec--CCCEEEEEECCC
Q 010759 455 HIWSLKEGKIVKTYTG--NGGIFEVCWNKE 482 (502)
Q Consensus 455 ~iw~~~~~~~~~~~~~--~~~i~~~~ws~~ 482 (502)
++|++.+++++..+.. ...+.+++|.|.
T Consensus 285 riwdl~~~~~~~~~~~~s~~~~~g~~~~pk 314 (493)
T PTZ00421 285 RCFELMNERLTFCSSYSSVEPHKGLCMMPK 314 (493)
T ss_pred EEEEeeCCceEEEeeccCCCCCcceEeccc
Confidence 9999999987766533 334667777774
No 74
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.8e-29 Score=220.92 Aligned_cols=278 Identities=22% Similarity=0.339 Sum_probs=221.8
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
++.-.+.|+++.|+++|.+|++++.|.+++|||..+++... .+ ..+...|..++|......++
T Consensus 10 f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~-------------ti----~skkyG~~~~~Fth~~~~~i 72 (311)
T KOG1446|consen 10 FRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVK-------------TI----NSKKYGVDLACFTHHSNTVI 72 (311)
T ss_pred cccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceee-------------Ee----ecccccccEEEEecCCceEE
Confidence 33346779999999999999999999999999998775321 11 12244677888877777777
Q ss_pred EEEC--CCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 230 TGSY--DGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 230 sg~~--dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.++. |.+||+-++. .+.+..|.||+..|.+|+.+|-++.|+|+|.|++|++||++..++...+..
T Consensus 73 ~sStk~d~tIryLsl~dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~------------ 140 (311)
T KOG1446|consen 73 HSSTKEDDTIRYLSLHDNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNL------------ 140 (311)
T ss_pred EccCCCCCceEEEEeecCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEec------------
Confidence 6666 8899999975 466778999999999999999999999999999999999997665432211
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--ceeeecc---cCCCc
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDLR---EHSKE 381 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~--~~~~~~~---~~~~~ 381 (502)
..-..++|.|.|-++|++.....|++||++.- .+..++. .....
T Consensus 141 -------------------------------~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~e 189 (311)
T KOG1446|consen 141 -------------------------------SGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKGPFTTFSITDNDEAE 189 (311)
T ss_pred -------------------------------CCCcceeECCCCcEEEEecCCCeEEEEEecccCCCCceeEccCCCCccc
Confidence 11234889999999999998889999999853 3333433 23567
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCE---EEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPV---YSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v---~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
...+.|||+|+ +|+.+...+.+++.|.-.|..+.++.++...- ...+|+||++++++|+.||+|++|+
T Consensus 190 w~~l~FS~dGK---------~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~a~ftPds~Fvl~gs~dg~i~vw~ 260 (311)
T KOG1446|consen 190 WTDLEFSPDGK---------SILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLSATFTPDSKFVLSGSDDGTIHVWN 260 (311)
T ss_pred eeeeEEcCCCC---------EEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcceeEEECCCCcEEEEecCCCcEEEEE
Confidence 88999999997 55667778999999999999998888775432 5778999999999999999999999
Q ss_pred CCCCeeEEEEec--CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 459 LKEGKIVKTYTG--NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 459 ~~~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+++|+.+..+.+ .+.+.++.|+|..-.+|+++.. +.+|
T Consensus 261 ~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~s~--l~fw 300 (311)
T KOG1446|consen 261 LETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSASSN--LVFW 300 (311)
T ss_pred cCCCcEeeEecCCCCCCccccccCCceeeeeecCce--EEEE
Confidence 999999998877 3457888899998888887654 5555
No 75
>KOG0276 consensus Vesicle coat complex COPI, beta' subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3e-31 Score=251.35 Aligned_cols=245 Identities=22% Similarity=0.390 Sum_probs=225.0
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCC
Q 010759 248 CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGE 326 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~ 326 (502)
..+..++..|.++.|||....++++-..|.|.|||-++...++.+.....|+.+..|.. ..-++++++|..|++++..+
T Consensus 7 rk~~~rSdRVKsVd~HPtePw~la~LynG~V~IWnyetqtmVksfeV~~~PvRa~kfiaRknWiv~GsDD~~IrVfnynt 86 (794)
T KOG0276|consen 7 RKFQSRSDRVKSVDFHPTEPWILAALYNGDVQIWNYETQTMVKSFEVSEVPVRAAKFIARKNWIVTGSDDMQIRVFNYNT 86 (794)
T ss_pred hHhhccCCceeeeecCCCCceEEEeeecCeeEEEecccceeeeeeeecccchhhheeeeccceEEEecCCceEEEEeccc
Confidence 34566889999999999999999999999999999999999999998888888887754 45578899999999999999
Q ss_pred CcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 327 NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 327 ~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
...+..|..|...|.|++.||..++++|+|+|-+|++||+... .+.++|.+|..-|.+++|.|... ..+||
T Consensus 87 ~ekV~~FeAH~DyIR~iavHPt~P~vLtsSDDm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~--------ntFaS 158 (794)
T KOG0276|consen 87 GEKVKTFEAHSDYIRSIAVHPTLPYVLTSSDDMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDP--------NTFAS 158 (794)
T ss_pred ceeeEEeeccccceeeeeecCCCCeEEecCCccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCc--------cceee
Confidence 9999999999999999999999999999999999999999754 67789999999999999999764 36899
Q ss_pred EeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC--CEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCC
Q 010759 406 ASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG--EYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKE 482 (502)
Q Consensus 406 gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg--~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~ 482 (502)
+|-|++|++|.+....+.+++.+|...|+|+.|-+-| +||+||++|.+|+|||..+...++++.++. .|..++|+|.
T Consensus 159 ~sLDrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~ 238 (794)
T KOG0276|consen 159 ASLDRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPE 238 (794)
T ss_pred eeccccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCC
Confidence 9999999999999999999999999999999997644 799999999999999999999999999875 5999999999
Q ss_pred CCEEEEEECCCeEEEEEe
Q 010759 483 GDKIAACFANHTVCVLDF 500 (502)
Q Consensus 483 g~~la~~~~~~~v~v~~~ 500 (502)
--.+++|+.||+|++|+-
T Consensus 239 lpiiisgsEDGTvriWhs 256 (794)
T KOG0276|consen 239 LPIIISGSEDGTVRIWNS 256 (794)
T ss_pred CcEEEEecCCccEEEecC
Confidence 999999999999999974
No 76
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.98 E-value=4.2e-30 Score=223.99 Aligned_cols=271 Identities=21% Similarity=0.354 Sum_probs=209.8
Q ss_pred ccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCC-CCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 152 GHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 152 ~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
.-.+.|.+++|||. ..+|+.||.|++||+|+++.. ...++ ....+.++|.+++|+.||..++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~k----------------a~~~~~~PvL~v~WsddgskVf 88 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPK----------------AQQSHDGPVLDVCWSDDGSKVF 88 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccch----------------hhhccCCCeEEEEEccCCceEE
Confidence 35678999999995 567778999999999999763 22211 1234578999999999999999
Q ss_pred EEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCC--EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC
Q 010759 230 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD--YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 307 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~--~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
+|+.|+.+++||+...+...+..|.++|.++.|-+... .|+|||+|++|+.||++....+.++..
T Consensus 89 ~g~~Dk~~k~wDL~S~Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~L------------- 155 (347)
T KOG0647|consen 89 SGGCDKQAKLWDLASGQVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQL------------- 155 (347)
T ss_pred eeccCCceEEEEccCCCeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeec-------------
Confidence 99999999999999888889999999999999988766 799999999999999986554333221
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee-cc-cCCCcEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LR-EHSKEIYTI 385 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~-~~~~~i~~~ 385 (502)
...+.+++. -..+++.+..++.|.+|+++.+..... +. ...-.+.+|
T Consensus 156 -----------------------------PeRvYa~Dv--~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~v 204 (347)
T KOG0647|consen 156 -----------------------------PERVYAADV--LYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCV 204 (347)
T ss_pred -----------------------------cceeeehhc--cCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEE
Confidence 112223322 235677788899999999976532211 11 122356788
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--eEEEEeeCCCC---------CEEEEEECCCCCEEEEEeCCCcE
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--KLLYSLNGHRE---------PVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--~~~~~~~~h~~---------~v~~l~~spdg~~lasgs~Dg~i 454 (502)
+..++... .+.|+-.|.+-|..+..+ +.-++++.|+. +|++|+|+|.-..|+|+|.||++
T Consensus 205 a~f~d~~~---------~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf 275 (347)
T KOG0647|consen 205 ACFQDKDG---------FALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTF 275 (347)
T ss_pred EEEecCCc---------eEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceE
Confidence 77777652 377999999999988876 56677888873 47889999999999999999999
Q ss_pred EEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEEC
Q 010759 455 HIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 455 ~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~ 491 (502)
.+||-.....+++++. ...|.+++|+.+|+++|.+..
T Consensus 276 ~FWDkdar~kLk~s~~~~qpItcc~fn~~G~ifaYA~g 313 (347)
T KOG0647|consen 276 SFWDKDARTKLKTSETHPQPITCCSFNRNGSIFAYALG 313 (347)
T ss_pred EEecchhhhhhhccCcCCCccceeEecCCCCEEEEEee
Confidence 9999887777777654 567999999999999997753
No 77
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.98 E-value=2.6e-30 Score=248.20 Aligned_cols=272 Identities=25% Similarity=0.453 Sum_probs=233.2
Q ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCcee-EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee-
Q 010759 217 TTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF- 294 (502)
Q Consensus 217 ~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~- 294 (502)
.-++|+. .+.|++|. ...|++|+...... .....+...|+++.|+++|.+|++|..+|.|.|||..+.+.+..+..
T Consensus 181 nlldWss-~n~laVal-g~~vylW~~~s~~v~~l~~~~~~~vtSv~ws~~G~~LavG~~~g~v~iwD~~~~k~~~~~~~~ 258 (484)
T KOG0305|consen 181 NLLDWSS-ANVLAVAL-GQSVYLWSASSGSVTELCSFGEELVTSVKWSPDGSHLAVGTSDGTVQIWDVKEQKKTRTLRGS 258 (484)
T ss_pred hHhhccc-CCeEEEEe-cceEEEEecCCCceEEeEecCCCceEEEEECCCCCEEEEeecCCeEEEEehhhccccccccCC
Confidence 3467884 45666655 35899999765443 33334488999999999999999999999999999999888888888
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceee-ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 373 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~ 373 (502)
|...+.++.|. ...+.+++.++.|..++++....+.. +.+|...|+.+.|++|+.++|+|+.|+.+.|||.....+..
T Consensus 259 h~~rvg~laW~-~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~ 337 (484)
T KOG0305|consen 259 HASRVGSLAWN-SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKF 337 (484)
T ss_pred cCceeEEEecc-CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccCCCccceEeccCCCccccE
Confidence 88999999998 56678889999999999988766554 88999999999999999999999999999999998888889
Q ss_pred ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE--eCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE--e
Q 010759 374 DLREHSKEIYTIRWSPTGSGTNNPNQQLILASA--SFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG--S 449 (502)
Q Consensus 374 ~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg--s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg--s 449 (502)
.+..|...|.+++|+|...+ +||+| +.|++|++||+.++..+..+.. ...|.+|.|++..+-|+++ -
T Consensus 338 ~~~~H~aAVKA~awcP~q~~--------lLAsGGGs~D~~i~fwn~~~g~~i~~vdt-gsQVcsL~Wsk~~kEi~sthG~ 408 (484)
T KOG0305|consen 338 TFTEHTAAVKALAWCPWQSG--------LLATGGGSADRCIKFWNTNTGARIDSVDT-GSQVCSLIWSKKYKELLSTHGY 408 (484)
T ss_pred EEeccceeeeEeeeCCCccC--------ceEEcCCCcccEEEEEEcCCCcEeccccc-CCceeeEEEcCCCCEEEEecCC
Confidence 99999999999999998653 78885 4799999999999999988764 4679999999998656553 3
Q ss_pred CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 450 LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+..|.||+..+.+++..+.+| ..|..++|||||..+++|+.|.++++|++
T Consensus 409 s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~ 460 (484)
T KOG0305|consen 409 SENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNL 460 (484)
T ss_pred CCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccc
Confidence 4678999999998888888775 46999999999999999999999999986
No 78
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.98 E-value=1.2e-31 Score=238.84 Aligned_cols=280 Identities=23% Similarity=0.359 Sum_probs=228.1
Q ss_pred eecccccCCCCeEEEEECCCC-CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEe
Q 010759 205 VKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 205 ~~~~~~~~~~~V~~l~~s~~~-~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd 282 (502)
+.+...+|...|.|++=+|.. ..++||+.||.|+|||+.. .+..++..|.+.|.+|++.. ..+++++.|++|++|-
T Consensus 58 Fv~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~--~~~~tvgdDKtvK~wk 135 (433)
T KOG0268|consen 58 FVGSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECIRTFKAHEGLVRGICVTQ--TSFFTVGDDKTVKQWK 135 (433)
T ss_pred chhhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhhheeecccCceeeEEecc--cceEEecCCcceeeee
Confidence 344446678889999999976 7899999999999999865 45668999999999999987 6799999999999998
Q ss_pred ccCcceeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCc
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVT 360 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~ 360 (502)
+... ...++.+ ...+..++.. .+..|++++. .|-+||..-..|+..+.-....|.++.|+|... .|++|+.|+.
T Consensus 136 ~~~~-p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrs 211 (433)
T KOG0268|consen 136 IDGP-PLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRS 211 (433)
T ss_pred ccCC-cceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCc
Confidence 6542 3333322 2233444432 3455777664 478899998999999887788899999999875 5778889999
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEEC
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~s 439 (502)
|.+||+++..+++.+.. .-.-..|+|+|.+. .+++|+.|.+++.+|++.. .++....+|...|.++.||
T Consensus 212 IvLyD~R~~~Pl~KVi~-~mRTN~IswnPeaf---------nF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~dVdfs 281 (433)
T KOG0268|consen 212 IVLYDLRQASPLKKVIL-TMRTNTICWNPEAF---------NFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVMDVDFS 281 (433)
T ss_pred eEEEecccCCccceeee-eccccceecCcccc---------ceeeccccccceehhhhhhcccchhhcccceeEEEeccC
Confidence 99999999988766532 23446789999543 5788999999999999864 4677888999999999999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEEec--CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 440 PTGEYLASGSLDKSMHIWSLKEGKIVKTYTG--NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 440 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
|.|+-+++||.|.+|+||.++.+....+|.. ...|+++.||.|.+++++|+.|+.|++|-.
T Consensus 282 ptG~EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka 344 (433)
T KOG0268|consen 282 PTGQEFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKA 344 (433)
T ss_pred CCcchhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeec
Confidence 9999999999999999999998887666643 456999999999999999999999999954
No 79
>PTZ00421 coronin; Provisional
Probab=99.98 E-value=1.6e-29 Score=251.76 Aligned_cols=244 Identities=20% Similarity=0.348 Sum_probs=197.8
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCcee--------------EeecCCCCCEEEEEecC-CCCEEEEecCCCeEE
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK--------------CTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAI 279 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~--------------~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~ 279 (502)
.|.....++++..+++++.+..+..|+..+... ..+.+|.++|++++|+| ++++|++|+.|++|+
T Consensus 22 ~i~~~~~~~d~~~~~~~n~~~~a~~w~~~gg~~v~~~~~~G~~~~~~~~l~GH~~~V~~v~fsP~d~~~LaSgS~DgtIk 101 (493)
T PTZ00421 22 NVTPSTALWDCSNTIACNDRFIAVPWQQLGSTAVLKHTDYGKLASNPPILLGQEGPIIDVAFNPFDPQKLFTASEDGTIM 101 (493)
T ss_pred ccccccccCCCCCcEeECCceEEEEEecCCceEEeeccccccCCCCCceEeCCCCCEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 455555667767777888888888887543221 23678999999999999 788999999999999
Q ss_pred EEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCC
Q 010759 280 VWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDD 358 (502)
Q Consensus 280 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~d 358 (502)
+||+.++..... ...++..+.+|...|.+++|+|++ ++|++|+.|
T Consensus 102 IWdi~~~~~~~~----------------------------------~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~D 147 (493)
T PTZ00421 102 GWGIPEEGLTQN----------------------------------ISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGAD 147 (493)
T ss_pred EEecCCCccccc----------------------------------cCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCC
Confidence 999876431100 123456788999999999999986 699999999
Q ss_pred CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCC-EEEEE
Q 010759 359 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREP-VYSLA 437 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~ 437 (502)
++|+|||+.++..+..+..|...|.+++|+|++. +|++|+.|+.|+|||+++++.+..+.+|.+. +..+.
T Consensus 148 gtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~---------lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~ 218 (493)
T PTZ00421 148 MVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGS---------LLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCL 218 (493)
T ss_pred CEEEEEECCCCeEEEEEcCCCCceEEEEEECCCC---------EEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEE
Confidence 9999999999999889999999999999999986 7999999999999999999999999999765 45688
Q ss_pred ECCCCCEEEEEe----CCCcEEEEeCCCCe-eEEEEe--cCCCEEEEEECCCCCEEEEEE-CCCeEEEEEee
Q 010759 438 FSPTGEYLASGS----LDKSMHIWSLKEGK-IVKTYT--GNGGIFEVCWNKEGDKIAACF-ANHTVCVLDFR 501 (502)
Q Consensus 438 ~spdg~~lasgs----~Dg~i~iw~~~~~~-~~~~~~--~~~~i~~~~ws~~g~~la~~~-~~~~v~v~~~~ 501 (502)
|++++..|++++ .|+.|++||+++.. .+.... ....+..+.|++++++|++|+ .|+.|++||++
T Consensus 219 w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lggkgDg~Iriwdl~ 290 (493)
T PTZ00421 219 WAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGSKGEGNIRCFELM 290 (493)
T ss_pred EcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEEeCCCeEEEEEee
Confidence 999988887765 47899999998754 333333 234566778999999999887 59999999986
No 80
>KOG0641 consensus WD40 repeat protein [General function prediction only]
Probab=99.98 E-value=8.1e-29 Score=207.37 Aligned_cols=278 Identities=24% Similarity=0.460 Sum_probs=229.8
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCC---------------c-eeEeecCCCCCEEEEEecCCCCEEEEecCCC
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---------------D-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK 276 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~---------------~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~ 276 (502)
+..|.+++|+|.|.+.+.|+...+.+|-.... . ....-..|++.|+|.+|+|.|..+++||.|+
T Consensus 32 sqairav~fhp~g~lyavgsnskt~ric~yp~l~~~r~~hea~~~pp~v~~kr~khhkgsiyc~~ws~~geliatgsndk 111 (350)
T KOG0641|consen 32 SQAIRAVAFHPAGGLYAVGSNSKTFRICAYPALIDLRHAHEAAKQPPSVLCKRNKHHKGSIYCTAWSPCGELIATGSNDK 111 (350)
T ss_pred hhheeeEEecCCCceEEeccCCceEEEEccccccCcccccccccCCCeEEeeeccccCccEEEEEecCccCeEEecCCCc
Confidence 56799999999999999999999999874210 0 1123356899999999999999999999999
Q ss_pred eEEEEeccCcce-----eEEeeecccCeEEEecCCC-----ceEEEE-cCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 277 TAIVWDVKTEEW-----KQQFEFHSGPTLDVDWRNN-----VSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 277 ~v~iwd~~~~~~-----~~~~~~~~~~~~~~~~~~~-----~~~~~~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
+|++.-.+...+ --.|..|.+.+.++.|.++ ..++++ ..|-.|++-+.+.+++...+.||++.|.++ +
T Consensus 112 ~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~tdc~~g~~~~a~sghtghilal-y 190 (350)
T KOG0641|consen 112 TIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYITDCGRGQGFHALSGHTGHILAL-Y 190 (350)
T ss_pred eEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEEeecCCCCcceeecCCcccEEEE-E
Confidence 999876543322 2357788899988888432 234443 467899999999999999999999999876 3
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceeeeccc--C-----CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC
Q 010759 346 DPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE--H-----SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE 418 (502)
Q Consensus 346 ~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--~-----~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~ 418 (502)
+-+|-+|++|+.|.+||+||++...++.++.. | ...|.+++..|.|. +|++|-.|....+||++
T Consensus 191 swn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsgr---------ll~sg~~dssc~lydir 261 (350)
T KOG0641|consen 191 SWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSGR---------LLASGHADSSCMLYDIR 261 (350)
T ss_pred EecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCcc---------eeeeccCCCceEEEEee
Confidence 44688999999999999999998888776532 2 35789999999997 89999999999999999
Q ss_pred CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC---e--eEEEEecCCCEEEEEECCCCCEEEEEECCC
Q 010759 419 LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG---K--IVKTYTGNGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 419 ~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~---~--~~~~~~~~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
-++.++.+..|...|.++.|||...||.++|.|..|++-|+... + .+..-.+...+..+.|+|..--+.+.+.|.
T Consensus 262 g~r~iq~f~phsadir~vrfsp~a~yllt~syd~~ikltdlqgdla~el~~~vv~ehkdk~i~~rwh~~d~sfisssadk 341 (350)
T KOG0641|consen 262 GGRMIQRFHPHSADIRCVRFSPGAHYLLTCSYDMKIKLTDLQGDLAHELPIMVVAEHKDKAIQCRWHPQDFSFISSSADK 341 (350)
T ss_pred CCceeeeeCCCccceeEEEeCCCceEEEEecccceEEEeecccchhhcCceEEEEeccCceEEEEecCccceeeeccCcc
Confidence 99999999999999999999999999999999999999998632 1 122334556688899999998999999999
Q ss_pred eEEEEEe
Q 010759 494 TVCVLDF 500 (502)
Q Consensus 494 ~v~v~~~ 500 (502)
++.+|-+
T Consensus 342 t~tlwa~ 348 (350)
T KOG0641|consen 342 TATLWAL 348 (350)
T ss_pred eEEEecc
Confidence 9999965
No 81
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.97 E-value=3.3e-28 Score=238.04 Aligned_cols=329 Identities=20% Similarity=0.304 Sum_probs=255.6
Q ss_pred CCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 144 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 144 ~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
.+.+++++++...|+++.=+|--..+|.|-.+|+|.|+++..++.+ ..+++- .+.|+.+.|.-
T Consensus 192 ~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil----------~sFk~d-------~g~VtslSFrt 254 (910)
T KOG1539|consen 192 GKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKIL----------MSFKQD-------WGRVTSLSFRT 254 (910)
T ss_pred CcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEE----------EEEEcc-------ccceeEEEecc
Confidence 3557889999999999999999999999999999999999766422 122211 36799999999
Q ss_pred CCCE-EEEEECCCcEEEEECCCceeE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc----eeEEeeecc
Q 010759 224 EGTL-LATGSYDGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE----WKQQFEFHS 296 (502)
Q Consensus 224 ~~~~-l~sg~~dg~i~iw~~~~~~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~----~~~~~~~~~ 296 (502)
||.. +++|...|.+.+||++..... ....|.+.|..+.|.|....+++++.|.++++|=..++. +.+.-.+|.
T Consensus 255 DG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs 334 (910)
T KOG1539|consen 255 DGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHS 334 (910)
T ss_pred CCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCC
Confidence 9975 556677799999999876443 345798999999999999999999999999999554433 233334566
Q ss_pred cCeEEEecC-C-CceEEEEcCCC---------------------------------------------------------
Q 010759 297 GPTLDVDWR-N-NVSFATSSTDN--------------------------------------------------------- 317 (502)
Q Consensus 297 ~~~~~~~~~-~-~~~~~~~~~d~--------------------------------------------------------- 317 (502)
.|..++.|. . ...+.+++.|.
T Consensus 335 ~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv 414 (910)
T KOG1539|consen 335 APPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQLHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNV 414 (910)
T ss_pred CCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcccccccccccccccchhhhcCCcceeeecccchhhhhcce
Confidence 666665553 1 12223334444
Q ss_pred --------eEEEEEcCCCcc-eeee-----cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec---ccCCC
Q 010759 318 --------MIYVCKIGENRP-IKTF-----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL---REHSK 380 (502)
Q Consensus 318 --------~i~~~~~~~~~~-~~~~-----~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~~~~ 380 (502)
..+.|+.+.... ...+ ......+++++.++-|++.+.|+..|+|-+|++.+|.....+ ..|..
T Consensus 415 ~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~vs~CGNF~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~ 494 (910)
T KOG1539|consen 415 ITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVCVSFCGNFVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKG 494 (910)
T ss_pred eEEecCcceEEEEeccCcccccEEecCccccccCcceEEEEEeccCceEEEeccCCeEEEEEcccCeeecccccCccccC
Confidence 344444433221 0111 112356889999999999999999999999999999888887 48999
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--------------------------------------
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-------------------------------------- 422 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-------------------------------------- 422 (502)
+|+.++....+. .+++++.+|.+++||..+..+
T Consensus 495 ~V~gla~D~~n~---------~~vsa~~~Gilkfw~f~~k~l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t 565 (910)
T KOG1539|consen 495 EVTGLAVDGTNR---------LLVSAGADGILKFWDFKKKVLKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVT 565 (910)
T ss_pred ceeEEEecCCCc---------eEEEccCcceEEEEecCCcceeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchh
Confidence 999999866554 678899999999998765331
Q ss_pred ---EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC-CeEEEE
Q 010759 423 ---LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN-HTVCVL 498 (502)
Q Consensus 423 ---~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~-~~v~v~ 498 (502)
+..+.||.+.|++++|||||+||++++.|++|++||+.++.++..+.-...+.++.|||.|++||+...| ..|++|
T Consensus 566 ~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDlpt~~lID~~~vd~~~~sls~SPngD~LAT~Hvd~~gIylW 645 (910)
T KOG1539|consen 566 RKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDLPTGTLIDGLLVDSPCTSLSFSPNGDFLATVHVDQNGIYLW 645 (910)
T ss_pred hhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEeccCcceeeeEecCCcceeeEECCCCCEEEEEEecCceEEEE
Confidence 2234589999999999999999999999999999999999999999888889999999999999999988 578888
No 82
>KOG0278 consensus Serine/threonine kinase receptor-associated protein [Lipid transport and metabolism]
Probab=99.97 E-value=1.2e-30 Score=221.56 Aligned_cols=247 Identities=25% Similarity=0.421 Sum_probs=208.2
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+-++.||++.|..+.++.+-.+.||++.|=+.++||.-+|.... .-.|..-|.+++|+.|.+
T Consensus 52 igtfeghkgavw~~~l~~na~~aasaaadftakvw~a~tgdelh------------------sf~hkhivk~~af~~ds~ 113 (334)
T KOG0278|consen 52 IGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDAVTGDELH------------------SFEHKHIVKAVAFSQDSN 113 (334)
T ss_pred EEeeeccCcceeeeecCchhhhhhhhcccchhhhhhhhhhhhhh------------------hhhhhheeeeEEecccch
Confidence 56899999999999999999999999999999999977664321 123445699999999999
Q ss_pred EEEEEECCCcEEEEECCCc--eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 227 LLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
+|++|+.+..+|||+++.. ....+.+|++.|..+-|....+.|+|++.|++||+||.+++..++.+.+
T Consensus 114 ~lltgg~ekllrvfdln~p~App~E~~ghtg~Ir~v~wc~eD~~iLSSadd~tVRLWD~rTgt~v~sL~~---------- 183 (334)
T KOG0278|consen 114 YLLTGGQEKLLRVFDLNRPKAPPKEISGHTGGIRTVLWCHEDKCILSSADDKTVRLWDHRTGTEVQSLEF---------- 183 (334)
T ss_pred hhhccchHHHhhhhhccCCCCCchhhcCCCCcceeEEEeccCceEEeeccCCceEEEEeccCcEEEEEec----------
Confidence 9999999999999998753 4557899999999999999999999999999999999999987766542
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
...|+++.++++|.+|.++ ..+.|.+||.++-..+..+... ..|.+
T Consensus 184 --------------------------------~s~VtSlEvs~dG~ilTia-~gssV~Fwdaksf~~lKs~k~P-~nV~S 229 (334)
T KOG0278|consen 184 --------------------------------NSPVTSLEVSQDGRILTIA-YGSSVKFWDAKSFGLLKSYKMP-CNVES 229 (334)
T ss_pred --------------------------------CCCCcceeeccCCCEEEEe-cCceeEEeccccccceeeccCc-ccccc
Confidence 2457889999999977554 5678999999988887776543 34566
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
...+|... +++.|+.|..++.||..++..+..+ ++|.++|.|+.|+|+|...|+||.||+|+||...-++
T Consensus 230 ASL~P~k~---------~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsGSEDGTirlWQt~~~~ 300 (334)
T KOG0278|consen 230 ASLHPKKE---------FFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASGSEDGTIRLWQTTPGK 300 (334)
T ss_pred ccccCCCc---------eEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeeccCCCceEEEEEecCCC
Confidence 66666542 6788999999999999999998885 8999999999999999999999999999999986554
Q ss_pred e
Q 010759 464 I 464 (502)
Q Consensus 464 ~ 464 (502)
.
T Consensus 301 ~ 301 (334)
T KOG0278|consen 301 T 301 (334)
T ss_pred c
Confidence 3
No 83
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.97 E-value=8.6e-29 Score=225.48 Aligned_cols=282 Identities=22% Similarity=0.323 Sum_probs=231.7
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..+|.++...|....++|||.|..+.++|...+... ..+.+|...|+.+.|+++...+++++.
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l-----------------~~~~Gh~kki~~v~~~~~~~~v~~aSa 281 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQIL-----------------ATLKGHTKKITSVKFHKDLDTVITASA 281 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhh-----------------hhccCcceEEEEEEeccchhheeecCC
Confidence 357888888888789999999999999997654321 223456788999999999999999999
Q ss_pred CCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 234 DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 234 dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
|..|+||.... ........|..+|+.+..+|.|.||++++.|+++.+.|++++........
T Consensus 282 d~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~lt~vs~------------------ 343 (506)
T KOG0289|consen 282 DEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQLTVVSD------------------ 343 (506)
T ss_pred cceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcEEEEEee------------------
Confidence 99999998653 34456778999999999999999999999999999999988764321110
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCC
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 392 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~ 392 (502)
.+..-.+++++|||||.+|++|..||.++|||++++..+..|.+|.++|..++|+.+|
T Consensus 344 ---------------------~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENG- 401 (506)
T KOG0289|consen 344 ---------------------ETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENG- 401 (506)
T ss_pred ---------------------ccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCc-
Confidence 0112247899999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCEEEEEECCCCCEEEEEeCCCcEEEEeCC--CCeeEEEEe
Q 010759 393 GTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLASGSLDKSMHIWSLK--EGKIVKTYT 469 (502)
Q Consensus 393 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~--~~~~~~~~~ 469 (502)
++|++++.|+.|++||++..+...++.-. ..+|.++.|.+.|+||+.+|.|=+|+++.-. ....+..+.
T Consensus 402 --------Y~Lat~add~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~~k~~k~W~~~~~~~ 473 (506)
T KOG0289|consen 402 --------YWLATAADDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYICKKKTKSWTEIKELA 473 (506)
T ss_pred --------eEEEEEecCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEEecccccceeeehhh
Confidence 48999999999999999987766665432 2379999999999999999888666666533 345555555
Q ss_pred cCC-CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 470 GNG-GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 470 ~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+. ..+.+.|....+++++++.|..+.|+-+
T Consensus 474 ~~sg~st~v~Fg~~aq~l~s~smd~~l~~~a~ 505 (506)
T KOG0289|consen 474 DHSGLSTGVRFGEHAQYLASTSMDAILRLYAL 505 (506)
T ss_pred hcccccceeeecccceEEeeccchhheEEeec
Confidence 444 5788999999999999999999888754
No 84
>KOG0973 consensus Histone transcription regulator HIRA, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.97 E-value=3.1e-29 Score=252.82 Aligned_cols=283 Identities=26% Similarity=0.398 Sum_probs=216.8
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCC--CCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADG--TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
..+.++..|.+.|+|+.|||||++||+||.|+.|.||..... ....+..++..++...+.+ ....+|...|..++|+
T Consensus 60 k~l~~m~~h~~sv~CVR~S~dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~-~~l~~H~~DV~Dv~Ws 138 (942)
T KOG0973|consen 60 KHLCTMDDHDGSVNCVRFSPDGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVV-SILRGHDSDVLDVNWS 138 (942)
T ss_pred hhheeeccccCceeEEEECCCCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEE-EEEecCCCccceeccC
Confidence 445678889999999999999999999999999999998741 1112222333333333222 2234578899999999
Q ss_pred CCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 223 GEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
|++.+|++++.|+.|.||+... +....+.+|.+.|.++.|.|-|+||++-+.|++|++|.+.+..+.+.+..+...
T Consensus 139 p~~~~lvS~s~DnsViiwn~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~--- 215 (942)
T KOG0973|consen 139 PDDSLLVSVSLDNSVIIWNAKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEE--- 215 (942)
T ss_pred CCccEEEEecccceEEEEccccceeeeeeecccccccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhh---
Confidence 9999999999999999999754 566789999999999999999999999999999999986554333332211100
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC----CCcEEEEeCCCCceeeeccc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~----dg~i~iwd~~~~~~~~~~~~ 377 (502)
. +-...+..+.|||||++|++... -.++.|.+-.+.+.-..|.+
T Consensus 216 --------------------------~------~~~T~f~RlSWSPDG~~las~nA~n~~~~~~~IieR~tWk~~~~LvG 263 (942)
T KOG0973|consen 216 --------------------------S------PLTTFFLRLSWSPDGHHLASPNAVNGGKSTIAIIERGTWKVDKDLVG 263 (942)
T ss_pred --------------------------C------CCcceeeecccCCCcCeecchhhccCCcceeEEEecCCceeeeeeec
Confidence 0 01223567999999999998743 23678888777787888999
Q ss_pred CCCcEEEEEEccCCCC------C-CCCC-CcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-CCCCEEEEEECCCCCEEEEE
Q 010759 378 HSKEIYTIRWSPTGSG------T-NNPN-QQLILASASFDSTVKLWDVELGKLLYSLNG-HREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~------~-~~~~-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spdg~~lasg 448 (502)
|.+++.+++|+|.--. . ..++ ...++|+||.|++|.||.....++++.+.. ...+|.+++|+|||..|..+
T Consensus 264 H~~p~evvrFnP~lfe~~~~ng~~~~~~~~y~i~AvgSqDrSlSVW~T~~~RPl~vi~~lf~~SI~DmsWspdG~~Lfac 343 (942)
T KOG0973|consen 264 HSAPVEVVRFNPKLFERNNKNGTSTQPNCYYCIAAVGSQDRSLSVWNTALPRPLFVIHNLFNKSIVDMSWSPDGFSLFAC 343 (942)
T ss_pred CCCceEEEEeChHHhccccccCCccCCCcceEEEEEecCCccEEEEecCCCCchhhhhhhhcCceeeeeEcCCCCeEEEE
Confidence 9999999999984211 1 1122 224789999999999999988888766532 34689999999999999999
Q ss_pred eCCCcEEEEeCCCCe
Q 010759 449 SLDKSMHIWSLKEGK 463 (502)
Q Consensus 449 s~Dg~i~iw~~~~~~ 463 (502)
|.||+|.++.+...+
T Consensus 344 S~DGtV~~i~Fee~E 358 (942)
T KOG0973|consen 344 SLDGTVALIHFEEKE 358 (942)
T ss_pred ecCCeEEEEEcchHH
Confidence 999999999987644
No 85
>KOG0268 consensus Sof1-like rRNA processing protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=1.8e-30 Score=231.42 Aligned_cols=285 Identities=20% Similarity=0.355 Sum_probs=229.6
Q ss_pred eeccccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..|.||..+|.|++=+|.. ..+|||+.||.|+|||+..-.+. +. ...|.+.|..|++.. .
T Consensus 60 ~~L~gHrdGV~~lakhp~~ls~~aSGs~DG~VkiWnlsqR~~~-------------~~----f~AH~G~V~Gi~v~~--~ 120 (433)
T KOG0268|consen 60 GSLDGHRDGVSCLAKHPNKLSTVASGSCDGEVKIWNLSQRECI-------------RT----FKAHEGLVRGICVTQ--T 120 (433)
T ss_pred hhccccccccchhhcCcchhhhhhccccCceEEEEehhhhhhh-------------he----eecccCceeeEEecc--c
Confidence 4578999999999999986 78999999999999998753321 12 234567899999887 6
Q ss_pred EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 227 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.++++|.|.+|+.|..++....++.+ .+.++++.-+..++.|+||+. .|-|||.+....++.+......+.++.|.+
T Consensus 121 ~~~tvgdDKtvK~wk~~~~p~~tilg-~s~~~gIdh~~~~~~FaTcGe--~i~IWD~~R~~Pv~smswG~Dti~svkfNp 197 (433)
T KOG0268|consen 121 SFFTVGDDKTVKQWKIDGPPLHTILG-KSVYLGIDHHRKNSVFATCGE--QIDIWDEQRDNPVSSMSWGADSISSVKFNP 197 (433)
T ss_pred ceEEecCCcceeeeeccCCcceeeec-cccccccccccccccccccCc--eeeecccccCCccceeecCCCceeEEecCC
Confidence 78899999999999998876666654 356778887777888999875 699999988778888877777777887754
Q ss_pred --CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceeeecccCCCcEE
Q 010759 307 --NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIY 383 (502)
Q Consensus 307 --~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~~i~ 383 (502)
...++++..|+.|.++|+++..|++... -.-.-+.|+|+|.+-.|++|++|..+..||++.- .++...+.|...|.
T Consensus 198 vETsILas~~sDrsIvLyD~R~~~Pl~KVi-~~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~~v~~dhvsAV~ 276 (433)
T KOG0268|consen 198 VETSILASCASDRSIVLYDLRQASPLKKVI-LTMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPLNVHKDHVSAVM 276 (433)
T ss_pred CcchheeeeccCCceEEEecccCCccceee-eeccccceecCccccceeeccccccceehhhhhhcccchhhcccceeEE
Confidence 4567788899999999999998876543 1234578999998888999999999999999754 45677788999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
++.|+|.|. -+++||.|.+||||.+..+...-.. +.-...|.++.||-|.+|+++||.|+.|++|.....
T Consensus 277 dVdfsptG~---------EfvsgsyDksIRIf~~~~~~SRdiYhtkRMq~V~~Vk~S~Dskyi~SGSdd~nvRlWka~As 347 (433)
T KOG0268|consen 277 DVDFSPTGQ---------EFVSGSYDKSIRIFPVNHGHSRDIYHTKRMQHVFCVKYSMDSKYIISGSDDGNVRLWKAKAS 347 (433)
T ss_pred EeccCCCcc---------hhccccccceEEEeecCCCcchhhhhHhhhheeeEEEEeccccEEEecCCCcceeeeecchh
Confidence 999999997 4889999999999998865432211 112246999999999999999999999999987654
Q ss_pred ee
Q 010759 463 KI 464 (502)
Q Consensus 463 ~~ 464 (502)
+.
T Consensus 348 ek 349 (433)
T KOG0268|consen 348 EK 349 (433)
T ss_pred hh
Confidence 43
No 86
>KOG0299 consensus U3 snoRNP-associated protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.97 E-value=5.8e-29 Score=228.41 Aligned_cols=269 Identities=22% Similarity=0.358 Sum_probs=229.5
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeE-----------------ee--cCCCCCEEEEEecCCCCEEEEe
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC-----------------TL--SKHKGPIFSLKWNKKGDYLLTG 272 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~-----------------~~--~~h~~~V~~l~~~~~~~~l~sg 272 (502)
|.-+|++++++|++.+.++++.+++|.-|+....... .. .+|...+.+++.++++.||++|
T Consensus 141 H~~s~~~vals~d~~~~fsask~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkylatg 220 (479)
T KOG0299|consen 141 HQLSVTSVALSPDDKRVFSASKDGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYLATG 220 (479)
T ss_pred ccCcceEEEeeccccceeecCCCcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEEEec
Confidence 4567999999999999999999999999986432100 11 2788899999999999999999
Q ss_pred cCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE
Q 010759 273 SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 273 s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 351 (502)
+.|..|.||+.++.+.++.+..|.+.|.++.|+. ...+.+++.|..+.+|++.....+.++.||...|.++....-++.
T Consensus 221 g~d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~IdaL~reR~ 300 (479)
T KOG0299|consen 221 GRDRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDALSRERC 300 (479)
T ss_pred CCCceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeechhcccce
Confidence 9999999999999999999999999999999964 567889999999999999998889999999999999998888888
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CC-
Q 010759 352 LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GH- 429 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h- 429 (502)
+-.|+.|+++++|++.... ...++++.+.+-|++|-.+. -+++||.+|.|.+|++.+.+++++.. +|
T Consensus 301 vtVGgrDrT~rlwKi~ees-qlifrg~~~sidcv~~In~~----------HfvsGSdnG~IaLWs~~KKkplf~~~~AHg 369 (479)
T KOG0299|consen 301 VTVGGRDRTVRLWKIPEES-QLIFRGGEGSIDCVAFINDE----------HFVSGSDNGSIALWSLLKKKPLFTSRLAHG 369 (479)
T ss_pred EEeccccceeEEEeccccc-eeeeeCCCCCeeeEEEeccc----------ceeeccCCceEEEeeecccCceeEeecccc
Confidence 8888899999999995433 33467788889999987654 47899999999999999998887653 22
Q ss_pred ----------CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC----eeEEEEecCCCEEEEEECCCCCEEEEEEC
Q 010759 430 ----------REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG----KIVKTYTGNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 430 ----------~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~----~~~~~~~~~~~i~~~~ws~~g~~la~~~~ 491 (502)
..+|++|+..|...++|+||.+|.|++|-+.+| .++..++-.+-|++++|+++|++|++|..
T Consensus 370 v~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk~ivagiG 445 (479)
T KOG0299|consen 370 VIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGKRIVAGIG 445 (479)
T ss_pred ccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCCEEEEecc
Confidence 127999999999999999999999999999887 34556666778999999999997776643
No 87
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.97 E-value=6.1e-29 Score=238.72 Aligned_cols=278 Identities=22% Similarity=0.382 Sum_probs=225.9
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEE-EEECC-CC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT-LDWNG-EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~-l~~s~-~~ 225 (502)
+.+.||...|.++++.+. ..++++|.||++++|+-......+. ..+ ..+.+-|.+ +++-+ ++
T Consensus 8 ~~l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~-----------~~~----~~~~g~i~~~i~y~e~~~ 71 (745)
T KOG0301|consen 8 HELEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLET-----------HAF----EGPKGFIANSICYAESDK 71 (745)
T ss_pred EEeccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccc-----------eec----ccCcceeeccceeccccC
Confidence 678999999999997754 4899999999999998543322110 001 112223333 55553 55
Q ss_pred CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 226 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
-.+++|+.|.+|.+|...+ ....++.+|...|.++....++. ++|||+|.++++|- .+++...+..|..+|-++..
T Consensus 72 ~~l~~g~~D~~i~v~~~~~~~P~~~LkgH~snVC~ls~~~~~~-~iSgSWD~TakvW~--~~~l~~~l~gH~asVWAv~~ 148 (745)
T KOG0301|consen 72 GRLVVGGMDTTIIVFKLSQAEPLYTLKGHKSNVCSLSIGEDGT-LISGSWDSTAKVWR--IGELVYSLQGHTASVWAVAS 148 (745)
T ss_pred cceEeecccceEEEEecCCCCchhhhhccccceeeeecCCcCc-eEecccccceEEec--chhhhcccCCcchheeeeee
Confidence 5689999999999999764 56778999999999998777766 99999999999995 45666678999999999887
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
.+...+++++.|++|++|.- ++.+++|.||+..|..+++-+++. |+||+.||.|++|++ ++.++..+.+|..-+++
T Consensus 149 l~e~~~vTgsaDKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYs 224 (745)
T KOG0301|consen 149 LPENTYVTGSADKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYS 224 (745)
T ss_pred cCCCcEEeccCcceeeeccC--CchhhhhccchhheeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEE
Confidence 77779999999999999986 667889999999999999987654 679999999999999 78888899999999999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+...+.+. .++|++.|++++||+.. .+.+.+.--...|+++.+-++|. |++|+.||.|+||...
T Consensus 225 is~~~~~~---------~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgD-Ivvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 225 ISMALSDG---------LIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGD-IVVGGSDGRVRVFTVD 288 (745)
T ss_pred EEecCCCC---------eEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCC-EEEeccCceEEEEEec
Confidence 99655544 68999999999999986 67777764455899999988887 5778889999999876
No 88
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=1.6e-29 Score=221.54 Aligned_cols=285 Identities=24% Similarity=0.431 Sum_probs=224.9
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+..|.||.++|..++.......+.|+|.|.+.+||.++++.+. ..+.+|.+.|.++.|++.+.
T Consensus 141 vre~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL-----------------~~Y~GH~GSVNsikfh~s~~ 203 (481)
T KOG0300|consen 141 VRELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACL-----------------ATYTGHTGSVNSIKFHNSGL 203 (481)
T ss_pred hhhhcccccceeeehhhcCCcceeecccccceeEEeeccccce-----------------eeecccccceeeEEeccccc
Confidence 3467899999999998887889999999999999999988643 23456788999999999999
Q ss_pred EEEEEECCCcEEEEECC------C-----------------------------------ceeEeecCCCCCEEEEEecCC
Q 010759 227 LLATGSYDGQARIWSTN------G-----------------------------------DLKCTLSKHKGPIFSLKWNKK 265 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~------~-----------------------------------~~~~~~~~h~~~V~~l~~~~~ 265 (502)
++++++.|++..||... . -.++.+.+|.+.|.+..|...
T Consensus 204 L~lTaSGD~taHIW~~av~~~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~g 283 (481)
T KOG0300|consen 204 LLLTASGDETAHIWKAAVNWEVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAG 283 (481)
T ss_pred eEEEccCCcchHHHHHhhcCcCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcC
Confidence 99999999999999510 0 012345566666666666666
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
|++++++|+|++..+||+.+++ ++..+.||..+.+-++-
T Consensus 284 g~Q~vTaSWDRTAnlwDVEtge-----------------------------------------~v~~LtGHd~ELtHcst 322 (481)
T KOG0300|consen 284 GQQMVTASWDRTANLWDVETGE-----------------------------------------VVNILTGHDSELTHCST 322 (481)
T ss_pred cceeeeeeccccceeeeeccCc-----------------------------------------eeccccCcchhcccccc
Confidence 6666666666666666666554 45567788888888999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCc-eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EE
Q 010759 346 DPTGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LL 423 (502)
Q Consensus 346 ~p~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~ 423 (502)
+|..+++++.+.|-+.++||++..- .+..|++|...|+++.|.-+.. +++||.|.+|++||+++.+ ++
T Consensus 323 HptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~vF~~dd~----------vVSgSDDrTvKvWdLrNMRspl 392 (481)
T KOG0300|consen 323 HPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVVFNTDDR----------VVSGSDDRTVKVWDLRNMRSPL 392 (481)
T ss_pred CCcceEEEEeccCceeEeccchhhcceeeeecccccceeEEEEecCCc----------eeecCCCceEEEeeeccccCcc
Confidence 9999999999999999999998543 3567899999999999987763 7899999999999999764 56
Q ss_pred EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE----ecCCC-EEEEEECCCC--CEEEEEECCCeEE
Q 010759 424 YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY----TGNGG-IFEVCWNKEG--DKIAACFANHTVC 496 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~----~~~~~-i~~~~ws~~g--~~la~~~~~~~v~ 496 (502)
.++. ...+++.++.+..++.||.--++..|++||+....+.+.. .++.. |.+++|..+- .-|.+|+-|..+.
T Consensus 393 ATIR-tdS~~NRvavs~g~~iIAiPhDNRqvRlfDlnG~RlaRlPrtsRqgHrRMV~c~AW~eehp~cnLftcGFDR~v~ 471 (481)
T KOG0300|consen 393 ATIR-TDSPANRVAVSKGHPIIAIPHDNRQVRLFDLNGNRLARLPRTSRQGHRRMVTCCAWLEEHPACNLFTCGFDRMVA 471 (481)
T ss_pred eeee-cCCccceeEeecCCceEEeccCCceEEEEecCCCccccCCcccccccceeeeeeeccccCcccccccccccceee
Confidence 6666 4578999999988889999888999999999765543222 23333 7789997653 5777888888888
Q ss_pred EEEe
Q 010759 497 VLDF 500 (502)
Q Consensus 497 v~~~ 500 (502)
=|++
T Consensus 472 gW~i 475 (481)
T KOG0300|consen 472 GWKI 475 (481)
T ss_pred eeEe
Confidence 8876
No 89
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=5.6e-28 Score=241.69 Aligned_cols=245 Identities=20% Similarity=0.328 Sum_probs=185.0
Q ss_pred EEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC-CCEEEEEECCCcEEEEECCCc----
Q 010759 171 SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNGD---- 245 (502)
Q Consensus 171 sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~~~l~sg~~dg~i~iw~~~~~---- 245 (502)
+||.++.|++|+..... .+..+ .+|..+|.+++|+|+ +.+|++|+.|+.|+||++...
T Consensus 49 gGG~~gvI~L~~~~r~~-------------~v~~L----~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~ 111 (568)
T PTZ00420 49 GGGLIGAIRLENQMRKP-------------PVIKL----KGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESV 111 (568)
T ss_pred CCCceeEEEeeecCCCc-------------eEEEE----cCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccc
Confidence 36678899999864321 11222 346789999999996 789999999999999997531
Q ss_pred -----eeEeecCCCCCEEEEEecCCCCE-EEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeE
Q 010759 246 -----LKCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMI 319 (502)
Q Consensus 246 -----~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 319 (502)
....+.+|...|.+++|+|++.. |++|+.|++|++||+++++....
T Consensus 112 ~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~---------------------------- 163 (568)
T PTZ00420 112 KEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQ---------------------------- 163 (568)
T ss_pred cccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEE----------------------------
Confidence 23467889999999999999876 46899999999999987653211
Q ss_pred EEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE-----EccCCCCC
Q 010759 320 YVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR-----WSPTGSGT 394 (502)
Q Consensus 320 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~-----~sp~g~~~ 394 (502)
+. |...|.+++|+|+|.+|++++.|+.|+|||++++..+..+.+|.+.+.+.. |++++.
T Consensus 164 -------------i~-~~~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~-- 227 (568)
T PTZ00420 164 -------------IN-MPKKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDN-- 227 (568)
T ss_pred -------------Ee-cCCcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCC--
Confidence 11 334688999999999999999999999999999999999988987654433 335543
Q ss_pred CCCCCcEEEEEEeCCC----eEEEEeCCC-CeEEEEe--eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--E
Q 010759 395 NNPNQQLILASASFDS----TVKLWDVEL-GKLLYSL--NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--V 465 (502)
Q Consensus 395 ~~~~~~~~l~sgs~dg----~i~iwd~~~-~~~~~~~--~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~ 465 (502)
+|++++.|+ .|+|||+++ ++++..+ ..+.+.+......++|.++++|+.|+.|++|++..+.+ +
T Consensus 228 -------~IlTtG~d~~~~R~VkLWDlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~~~~~~~l 300 (568)
T PTZ00420 228 -------YILSTGFSKNNMREMKLWDLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHSLGSIRKV 300 (568)
T ss_pred -------EEEEEEcCCCCccEEEEEECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEccCCcEEee
Confidence 566766664 799999995 5555544 33444555555667799999999999999999987753 3
Q ss_pred EEEecCCCEEEEEECCCC
Q 010759 466 KTYTGNGGIFEVCWNKEG 483 (502)
Q Consensus 466 ~~~~~~~~i~~~~ws~~g 483 (502)
..+.......+++|.|+-
T Consensus 301 ~~~~s~~p~~g~~f~Pkr 318 (568)
T PTZ00420 301 NEYKSCSPFRSFGFLPKQ 318 (568)
T ss_pred cccccCCCccceEEcccc
Confidence 334444567789999964
No 90
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.7e-28 Score=212.14 Aligned_cols=266 Identities=21% Similarity=0.355 Sum_probs=212.0
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
...|..+.|+|.+..|+.++.||++++|++...... . .-.+..++++++|.++ ..+++|+.
T Consensus 13 ~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~--------------~----~~~~~~plL~c~F~d~-~~~~~G~~ 73 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLK--------------L----KFKHGAPLLDCAFADE-STIVTGGL 73 (323)
T ss_pred hhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhh--------------h----heecCCceeeeeccCC-ceEEEecc
Confidence 567999999999999999999999999998654210 0 0124678999999984 67889999
Q ss_pred CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEE
Q 010759 234 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS 313 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (502)
||.|+.+|++......+..|..+|.++.+.+....+++||+|++|++||.+.......+.
T Consensus 74 dg~vr~~Dln~~~~~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d-------------------- 133 (323)
T KOG1036|consen 74 DGQVRRYDLNTGNEDQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFD-------------------- 133 (323)
T ss_pred CceEEEEEecCCcceeeccCCCceEEEEeeccCCeEEEcccCccEEEEeccccccccccc--------------------
Confidence 999999999988888889999999999999999999999999999999998632211110
Q ss_pred cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc--CCCcEEEEEEccCC
Q 010759 314 STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE--HSKEIYTIRWSPTG 391 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--~~~~i~~~~~sp~g 391 (502)
....|.|+.. .|..|+.|+.|..+.+||+++.......+. -.-.+.++++-|++
T Consensus 134 ----------------------~~kkVy~~~v--~g~~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~ 189 (323)
T KOG1036|consen 134 ----------------------QGKKVYCMDV--SGNRLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNG 189 (323)
T ss_pred ----------------------cCceEEEEec--cCCEEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCC
Confidence 1124556655 467888999999999999998765443222 22357889888865
Q ss_pred CCCCCCCCcEEEEEEeCCCeEEEEeCCCC----eEEEEeeCCCC---------CEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 392 SGTNNPNQQLILASASFDSTVKLWDVELG----KLLYSLNGHRE---------PVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 392 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~---------~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.+ .+.+|-||.|.+=.++.. +..+.++.|.. ||++|+|||--+.|||||.||.|.+||
T Consensus 190 eG---------y~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd 260 (323)
T KOG1036|consen 190 EG---------YVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWD 260 (323)
T ss_pred Cc---------eEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEcc
Confidence 53 567889999887666544 55677888863 799999999999999999999999999
Q ss_pred CCCCeeEEEEecC-CCEEEEEECCCCCEEEEEEC
Q 010759 459 LKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 459 ~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~ 491 (502)
+...+.+..+... ..|.+++|+.+|..||.|+.
T Consensus 261 ~~~rKrl~q~~~~~~SI~slsfs~dG~~LAia~s 294 (323)
T KOG1036|consen 261 LFNRKRLKQLAKYETSISSLSFSMDGSLLAIASS 294 (323)
T ss_pred CcchhhhhhccCCCCceEEEEeccCCCeEEEEec
Confidence 9998888887664 56999999999999998864
No 91
>KOG0305 consensus Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=99.97 E-value=1.9e-28 Score=235.32 Aligned_cols=276 Identities=26% Similarity=0.490 Sum_probs=229.7
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcE
Q 010759 158 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQA 237 (502)
Q Consensus 158 ~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i 237 (502)
+-+.|+ ....||.|. ...|++|+-.++.. ..+-.+ +...|+++.|+++|.+|++|..+|.|
T Consensus 181 nlldWs-s~n~laVal-g~~vylW~~~s~~v-----------~~l~~~------~~~~vtSv~ws~~G~~LavG~~~g~v 241 (484)
T KOG0305|consen 181 NLLDWS-SANVLAVAL-GQSVYLWSASSGSV-----------TELCSF------GEELVTSVKWSPDGSHLAVGTSDGTV 241 (484)
T ss_pred hHhhcc-cCCeEEEEe-cceEEEEecCCCce-----------EEeEec------CCCceEEEEECCCCCEEEEeecCCeE
Confidence 346788 444566553 56799999776531 111111 14679999999999999999999999
Q ss_pred EEEECCC-ceeEeecC-CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE-eeecccCeEEEecC-CCceEEEE
Q 010759 238 RIWSTNG-DLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWR-NNVSFATS 313 (502)
Q Consensus 238 ~iw~~~~-~~~~~~~~-h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~ 313 (502)
.|||... .....+.+ |...|-+++|+ +..+.+|+.|+.|.++|++..+.... +..|...|..+.|. +...++++
T Consensus 242 ~iwD~~~~k~~~~~~~~h~~rvg~laW~--~~~lssGsr~~~I~~~dvR~~~~~~~~~~~H~qeVCgLkws~d~~~lASG 319 (484)
T KOG0305|consen 242 QIWDVKEQKKTRTLRGSHASRVGSLAWN--SSVLSSGSRDGKILNHDVRISQHVVSTLQGHRQEVCGLKWSPDGNQLASG 319 (484)
T ss_pred EEEehhhccccccccCCcCceeEEEecc--CceEEEecCCCcEEEEEEecchhhhhhhhcccceeeeeEECCCCCeeccC
Confidence 9999754 34455666 99999999998 56899999999999999998765444 78899999999996 56788999
Q ss_pred cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEe--CCCcEEEEeCCCCceeeecccCCCcEEEEEEccC
Q 010759 314 STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPT 390 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~ 390 (502)
+.|+.+.+|+.....|+..+..|.+.|.+++|+|- ..+||+|+ .|+.|++||..++..+..+. ....|.++.|++.
T Consensus 320 gnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~g~~i~~vd-tgsQVcsL~Wsk~ 398 (484)
T KOG0305|consen 320 GNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNTGARIDSVD-TGSQVCSLIWSKK 398 (484)
T ss_pred CCccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCCCcEecccc-cCCceeeEEEcCC
Confidence 99999999999988999999999999999999995 56788875 59999999999998887664 4578999999998
Q ss_pred CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 391 GSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 391 g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
... ++...|..++.|.||++.+.+.+..+.+|...|..+++||||..+++|+.|.++++|++-..
T Consensus 399 ~kE-------i~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~DETlrfw~~f~~ 463 (484)
T KOG0305|consen 399 YKE-------LLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAADETLRFWNLFDE 463 (484)
T ss_pred CCE-------EEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecccCcEEeccccCC
Confidence 752 34444667889999999999999999999999999999999999999999999999998653
No 92
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.6e-28 Score=213.18 Aligned_cols=261 Identities=21% Similarity=0.353 Sum_probs=206.4
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.+...+..|.++|+|+|. ++.++||||.|-+|+|||+...... +....|.+.|+++.|.+.
T Consensus 34 ~~lF~~~aH~~sitavAV--s~~~~aSGssDetI~IYDm~k~~ql-----------------g~ll~HagsitaL~F~~~ 94 (362)
T KOG0294|consen 34 KPLFAFSAHAGSITALAV--SGPYVASGSSDETIHIYDMRKRKQL-----------------GILLSHAGSITALKFYPP 94 (362)
T ss_pred eccccccccccceeEEEe--cceeEeccCCCCcEEEEeccchhhh-----------------cceeccccceEEEEecCC
Confidence 335677899999999998 5899999999999999998754322 122235788999999987
Q ss_pred CC--EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 225 GT--LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 225 ~~--~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
-. .|++|+.||.|.+|+... .+..++.+|++.|+.++.||.+..-++.+.|+.+++||+-+++..
T Consensus 95 ~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a------------ 162 (362)
T KOG0294|consen 95 LSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVA------------ 162 (362)
T ss_pred cchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCccc------------
Confidence 65 899999999999999865 566789999999999999999999999999999999999776521
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
++.+++. ....|.|+|.|.+|+.++.+ .|-||.+.+......+.. ...
T Consensus 163 ------------------~v~~L~~------------~at~v~w~~~Gd~F~v~~~~-~i~i~q~d~A~v~~~i~~-~~r 210 (362)
T KOG0294|consen 163 ------------------FVLNLKN------------KATLVSWSPQGDHFVVSGRN-KIDIYQLDNASVFREIEN-PKR 210 (362)
T ss_pred ------------------eeeccCC------------cceeeEEcCCCCEEEEEecc-EEEEEecccHhHhhhhhc-ccc
Confidence 1122211 12238999999988888776 588998877665544432 245
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE--CCCCCEEEEEeCCCcEEEEeC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF--SPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--spdg~~lasgs~Dg~i~iw~~ 459 (502)
+.++.|-..+ .|++|..|+.|++||.....++..+.+|...|-++.+ .|++.||+|+|.||.|+|||+
T Consensus 211 ~l~~~~l~~~----------~L~vG~d~~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~ 280 (362)
T KOG0294|consen 211 ILCATFLDGS----------ELLVGGDNEWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDI 280 (362)
T ss_pred ceeeeecCCc----------eEEEecCCceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEc
Confidence 6666664433 6889999999999999999999999999999999984 578899999999999999999
Q ss_pred CCC-----eeEEEEecCCCEEEEE
Q 010759 460 KEG-----KIVKTYTGNGGIFEVC 478 (502)
Q Consensus 460 ~~~-----~~~~~~~~~~~i~~~~ 478 (502)
+.. +++..+..+..++++.
T Consensus 281 ~~~~k~~~~~l~e~n~~~RltCl~ 304 (362)
T KOG0294|consen 281 DMETKKRPTLLAELNTNVRLTCLR 304 (362)
T ss_pred cccccCCcceeEEeecCCccceee
Confidence 765 4555555555555544
No 93
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.97 E-value=3.4e-28 Score=213.47 Aligned_cols=292 Identities=23% Similarity=0.350 Sum_probs=212.0
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
..+-.+.+|+||.+.|++++||.||++|||++.|++|+||++.+..... +...+.+-....-+.+.|
T Consensus 74 ~Hpl~~~~LKgH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~e-------------Hr~~R~nve~dhpT~V~F 140 (420)
T KOG2096|consen 74 VHPLNVSVLKGHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKE-------------HRCIRQNVEYDHPTRVVF 140 (420)
T ss_pred ccchhhhhhhccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhh-------------hhHhhccccCCCceEEEE
Confidence 3444567899999999999999999999999999999999987532110 000111222345788999
Q ss_pred CCCCCEEEE-EECCCcEEEEECC----CceeE---------eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 222 NGEGTLLAT-GSYDGQARIWSTN----GDLKC---------TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 222 s~~~~~l~s-g~~dg~i~iw~~~----~~~~~---------~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
+||.+-++. .-....+++|... |.... .-..|.-.|..+-....+.+|++++.|..|.+|+++ |+
T Consensus 141 apDc~s~vv~~~~g~~l~vyk~~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq 219 (420)
T KOG2096|consen 141 APDCKSVVVSVKRGNKLCVYKLVKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQ 219 (420)
T ss_pred CCCcceEEEEEccCCEEEEEEeeecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cc
Confidence 999876554 4455678898642 21111 123466777777777888999999999999999998 78
Q ss_pred eeEEeeecccCeEEEecCCCceE-EEEcCCCeEEEEEcC--------CCcceeeecCCCcceeEEEEcCCCCEEEEEeCC
Q 010759 288 WKQQFEFHSGPTLDVDWRNNVSF-ATSSTDNMIYVCKIG--------ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~i~~~~~~--------~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d 358 (502)
.++.+...+.........++.+| ++++----+++|..- +-+.+..+.||...|..++|+|+...++|.|.|
T Consensus 220 ~L~~idtnq~~n~~aavSP~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD 299 (420)
T KOG2096|consen 220 LLQSIDTNQSSNYDAAVSPDGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD 299 (420)
T ss_pred eeeeeccccccccceeeCCCCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC
Confidence 77777766555555555555555 455656668888752 122355788999999999999999999999999
Q ss_pred CcEEEEeCCCC-------ceeeec----ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-
Q 010759 359 VTAKIWNMKQD-------KYVHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL- 426 (502)
Q Consensus 359 g~i~iwd~~~~-------~~~~~~----~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~- 426 (502)
|+++|||+.-. +.+.+. ....+.-..+..+|.|. .|| .+....++++..++|+..-++
T Consensus 300 G~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~RL~lsP~g~---------~lA-~s~gs~l~~~~se~g~~~~~~e 369 (420)
T KOG2096|consen 300 GKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPVRLELSPSGD---------SLA-VSFGSDLKVFASEDGKDYPELE 369 (420)
T ss_pred CcEEEeeccceEecCCCchHhhcCCcchhhcCCCceEEEeCCCCc---------EEE-eecCCceEEEEcccCccchhHH
Confidence 99999997532 112211 12223334788899886 343 455678999999998876665
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
..|...|.+|+|+|+|+|+||+| |..++++.
T Consensus 370 ~~h~~~Is~is~~~~g~~~atcG-dr~vrv~~ 400 (420)
T KOG2096|consen 370 DIHSTTISSISYSSDGKYIATCG-DRYVRVIR 400 (420)
T ss_pred HhhcCceeeEEecCCCcEEeeec-ceeeeeec
Confidence 45889999999999999999998 67788776
No 94
>PTZ00420 coronin; Provisional
Probab=99.97 E-value=1.1e-27 Score=239.69 Aligned_cols=227 Identities=18% Similarity=0.343 Sum_probs=181.7
Q ss_pred EECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCC-CCEEEEecCCCeEEEEeccCcce-eEEeeecccCeEEEecCCC
Q 010759 231 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEW-KQQFEFHSGPTLDVDWRNN 307 (502)
Q Consensus 231 g~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~~~ 307 (502)
|+.++.|++|+... .....+.+|.++|++++|+|. +++|+||+.|++|++||+.++.. ...
T Consensus 50 GG~~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~---------------- 113 (568)
T PTZ00420 50 GGLIGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKE---------------- 113 (568)
T ss_pred CCceeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccc----------------
Confidence 66788999998653 345678899999999999997 78999999999999999976421 000
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE-EEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
...++..+.+|...|.+++|+|++.. +++++.|++|+|||++++..+..+. +...|.+++
T Consensus 114 ------------------i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~-~~~~V~Sls 174 (568)
T PTZ00420 114 ------------------IKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQIN-MPKKLSSLK 174 (568)
T ss_pred ------------------cccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEe-cCCcEEEEE
Confidence 01234456789999999999999875 5799999999999999988776665 567899999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEE-----EEECCCCCEEEEEeCCC----cEEEE
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS-----LAFSPTGEYLASGSLDK----SMHIW 457 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~-----l~~spdg~~lasgs~Dg----~i~iw 457 (502)
|+|+|. +|++++.|+.|+|||+++++.+.++.+|.+.+.+ ..|++++.+|+++|.|+ .|+||
T Consensus 175 wspdG~---------lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~~~IlTtG~d~~~~R~VkLW 245 (568)
T PTZ00420 175 WNIKGN---------LLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDDNYILSTGFSKNNMREMKLW 245 (568)
T ss_pred ECCCCC---------EEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCCCEEEEEEcCCCCccEEEEE
Confidence 999986 7888999999999999999999999999876543 34578999999988775 79999
Q ss_pred eCCC-CeeEEEEecCC--CEEEEEE-CCCCCEEEEEECCCeEEEEEee
Q 010759 458 SLKE-GKIVKTYTGNG--GIFEVCW-NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 458 ~~~~-~~~~~~~~~~~--~i~~~~w-s~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+++ ++.+..+..+. ++....| .++|.++++|..|++|++|+++
T Consensus 246 Dlr~~~~pl~~~~ld~~~~~L~p~~D~~tg~l~lsGkGD~tIr~~e~~ 293 (568)
T PTZ00420 246 DLKNTTSALVTMSIDNASAPLIPHYDESTGLIYLIGKGDGNCRYYQHS 293 (568)
T ss_pred ECCCCCCceEEEEecCCccceEEeeeCCCCCEEEEEECCCeEEEEEcc
Confidence 9985 55666554432 3323344 4458899999999999999985
No 95
>KOG0301 consensus Phospholipase A2-activating protein (contains WD40 repeats) [Lipid transport and metabolism]
Probab=99.97 E-value=2.7e-28 Score=234.32 Aligned_cols=273 Identities=22% Similarity=0.350 Sum_probs=233.9
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCcee---EeecCCCCCEEE-EEecC-CCCEEEEecCCCeEEEEec
Q 010759 209 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK---CTLSKHKGPIFS-LKWNK-KGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~---~~~~~h~~~V~~-l~~~~-~~~~l~sgs~D~~v~iwd~ 283 (502)
..+|...|..++..+. ..++++|.||++++|...+... ..+.+|.+-|.. ++|.+ ++-.+++|+.|++|.+|.+
T Consensus 10 l~gH~~DVr~v~~~~~-~~i~s~sRd~t~~vw~~~~~~~l~~~~~~~~~g~i~~~i~y~e~~~~~l~~g~~D~~i~v~~~ 88 (745)
T KOG0301|consen 10 LEGHKSDVRAVAVTDG-VCIISGSRDGTVKVWAKKGKQYLETHAFEGPKGFIANSICYAESDKGRLVVGGMDTTIIVFKL 88 (745)
T ss_pred eccCccchheeEecCC-eEEeecCCCCceeeeeccCcccccceecccCcceeeccceeccccCcceEeecccceEEEEec
Confidence 3467888888887654 4789999999999999754332 346778777766 88876 3346999999999999999
Q ss_pred cCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
.......++..|...|.++.......++++|-|.++++|.... ....+.||+..|++++.-|.+ .++|||.|.+|++
T Consensus 89 ~~~~P~~~LkgH~snVC~ls~~~~~~~iSgSWD~TakvW~~~~--l~~~l~gH~asVWAv~~l~e~-~~vTgsaDKtIkl 165 (745)
T KOG0301|consen 89 SQAEPLYTLKGHKSNVCSLSIGEDGTLISGSWDSTAKVWRIGE--LVYSLQGHTASVWAVASLPEN-TYVTGSADKTIKL 165 (745)
T ss_pred CCCCchhhhhccccceeeeecCCcCceEecccccceEEecchh--hhcccCCcchheeeeeecCCC-cEEeccCcceeee
Confidence 9999999999999999999977776799999999999998754 445689999999999999988 6789999999999
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
|.- ++.+++|.+|...|..+++-|++. ++|++.||.|++|++ +|.++.++.+|+..|++++..+++.
T Consensus 166 Wk~--~~~l~tf~gHtD~VRgL~vl~~~~----------flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~ 232 (745)
T KOG0301|consen 166 WKG--GTLLKTFSGHTDCVRGLAVLDDSH----------FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDG 232 (745)
T ss_pred ccC--CchhhhhccchhheeeeEEecCCC----------eEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCC
Confidence 964 788899999999999999988864 789999999999999 7999999999999999999888899
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 444 YLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.++|+|.|++++||+.. .+.+.+...+ .|+++..-+.|+. ++|+.||.|+||..+
T Consensus 233 ~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDI-vvg~SDG~VrVfT~~ 288 (745)
T KOG0301|consen 233 LIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDI-VVGGSDGRVRVFTVD 288 (745)
T ss_pred eEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCE-EEeccCceEEEEEec
Confidence 99999999999999876 7778877665 6889888888865 566668999999754
No 96
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.97 E-value=3.8e-29 Score=238.39 Aligned_cols=296 Identities=20% Similarity=0.377 Sum_probs=234.3
Q ss_pred cccccee---EEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 152 GHTSEVC---ACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 152 ~H~~~V~---~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.|...|. ++..++ .+++|+|||.||.|++|++..-...... ........|+..|..++...+|+.
T Consensus 19 qn~~~v~~~~~Lq~da~~~ryLfTgGRDg~i~~W~~~~d~~~~s~-----------~~~asme~HsDWVNDiiL~~~~~t 87 (735)
T KOG0308|consen 19 QNRNGVNITKALQLDAPNGRYLFTGGRDGIIRLWSVTQDSNEPST-----------PYIASMEHHSDWVNDIILCGNGKT 87 (735)
T ss_pred hccccccchhhccccCCCCceEEecCCCceEEEeccccccCCccc-----------chhhhhhhhHhHHhhHHhhcCCCc
Confidence 3555555 555665 4678999999999999997543211000 012334457888999999999999
Q ss_pred EEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEe-cCCCCEEEEecCCCeEEEEeccCcce--eEEeeecccCeEE
Q 010759 228 LATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKW-NKKGDYLLTGSCDKTAIVWDVKTEEW--KQQFEFHSGPTLD 301 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~-~~~~~~l~sgs~D~~v~iwd~~~~~~--~~~~~~~~~~~~~ 301 (502)
|+|+|.|-+|++|+.... +..++..|+..|.+|++ -++...++|||-|+.|++||+.++.. +..+.
T Consensus 88 lIS~SsDtTVK~W~~~~~~~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~~s~n-------- 159 (735)
T KOG0308|consen 88 LISASSDTTVKVWNAHKDNTFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLVASFN-------- 159 (735)
T ss_pred eEEecCCceEEEeecccCcchhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhhhhcc--------
Confidence 999999999999997644 44578889999999999 78888999999999999999987732 11111
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 380 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~ 380 (502)
.+ +...+. |+...|.+++.++.|..|++|+..+.+++||.++.+.+..+++|..
T Consensus 160 ----------------~~---------t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek~lr~wDprt~~kimkLrGHTd 214 (735)
T KOG0308|consen 160 ----------------NV---------TVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEKDLRLWDPRTCKKIMKLRGHTD 214 (735)
T ss_pred ----------------cc---------ccccCCCCCccceeeeecCCcceEEEecCcccceEEeccccccceeeeecccc
Confidence 01 111122 7888899999999999999999999999999999999999999999
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
.|..+..+++|. .++|+|.||+|++||+...++++++..|...|+++..+|+=.++.+|+.||.|..=+++
T Consensus 215 NVr~ll~~dDGt---------~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 215 NVRVLLVNDDGT---------RLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred ceEEEEEcCCCC---------eEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 999999999997 68899999999999999999999999999999999999999999999999999999998
Q ss_pred C-CeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 461 E-GKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 461 ~-~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+ .+....+.....|..+..+...+-+-++..|+.|.-|-+
T Consensus 286 n~~~~tlick~daPv~~l~~~~~~~~~WvtTtds~I~rW~~ 326 (735)
T KOG0308|consen 286 NPAKSTLICKEDAPVLKLHLHEHDNSVWVTTTDSSIKRWKL 326 (735)
T ss_pred CchhheEeecCCCchhhhhhccccCCceeeeccccceecCC
Confidence 8 344445555555656665555554456666666665543
No 97
>KOG1063 consensus RNA polymerase II elongator complex, subunit ELP2, WD repeat superfamily [Chromatin structure and dynamics; Transcription]
Probab=99.97 E-value=1.2e-27 Score=229.75 Aligned_cols=345 Identities=25% Similarity=0.388 Sum_probs=255.3
Q ss_pred ceeeccccccceeEEEECCCCC---EEEEEeCCCcEEEEecCCCCCCC---------CCCCCCceEEEEEee------ec
Q 010759 146 DVTILEGHTSEVCACAWSPAGS---LLASGSGDSTARIWTIADGTSNG---------GAQNGPLNVLVLKHV------KG 207 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~---~l~sgs~D~~i~iW~~~~~~~~~---------~~~~~~~~~~~~~~~------~~ 207 (502)
.+..|.||.+.|++++|...+. +|||+|.|.+||||.+.-+.... ...+.+.. ..+..+ ..
T Consensus 183 ~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~~e~~~t~~~~~~~f-~~l~~i~~~is~ea 261 (764)
T KOG1063|consen 183 RVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNEREDSLTTLSNLPVF-MILEEIQYRISFEA 261 (764)
T ss_pred EEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccccccccccccCCcee-eeeeeEEEEEehhh
Confidence 4578899999999999998654 89999999999999875332111 11111110 111111 12
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc---eeE-----eecCCCCCEEEEEecCCCCEEEEecCCCeEE
Q 010759 208 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKC-----TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAI 279 (502)
Q Consensus 208 ~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~-----~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~ 279 (502)
...+|...|.++.|+|.+..|++++.|.++.+|..... -.. ...+..+.-++.-|+|+++.+++-+.-|-.+
T Consensus 262 ll~GHeDWV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe~gg~a~GF~g~lw~~n~~~ii~~g~~Gg~h 341 (764)
T KOG1063|consen 262 LLMGHEDWVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGEVGGSAGGFWGGLWSPNSNVIIAHGRTGGFH 341 (764)
T ss_pred hhcCcccceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeecccccccceeeEEEcCCCCEEEEecccCcEE
Confidence 33478899999999999999999999999999986533 111 2234445679999999999999999999999
Q ss_pred EEecc-CcceeE--EeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcc----eeeecCCCcceeEEEEcCCCCE
Q 010759 280 VWDVK-TEEWKQ--QFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 280 iwd~~-~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~ 351 (502)
+|-.. ...|.+ .+.+|...|.+++|.+. ..+++.+.|.+-+++-....+. +..-.-|...++|++|-+....
T Consensus 342 lWkt~d~~~w~~~~~iSGH~~~V~dv~W~psGeflLsvs~DQTTRlFa~wg~q~~wHEiaRPQiHGyDl~c~~~vn~~~~ 421 (764)
T KOG1063|consen 342 LWKTKDKTFWTQEPVISGHVDGVKDVDWDPSGEFLLSVSLDQTTRLFARWGRQQEWHEIARPQIHGYDLTCLSFVNEDLQ 421 (764)
T ss_pred EEeccCccceeeccccccccccceeeeecCCCCEEEEeccccceeeecccccccceeeecccccccccceeeehccCCce
Confidence 99732 233333 35678899999999754 4566789999988876552221 1111247778999999886667
Q ss_pred EEEEeCCCcEEEEeCCC-------------------------------------------Cce-----------------
Q 010759 352 LASCSDDVTAKIWNMKQ-------------------------------------------DKY----------------- 371 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~-------------------------------------------~~~----------------- 371 (502)
|++|.+...+|+|+... +..
T Consensus 422 FVSgAdEKVlRvF~aPk~fv~~l~~i~g~~~~~~~~~p~gA~VpaLGLSnKa~~~~e~~~G~~~~~~~et~~~~~p~~L~ 501 (764)
T KOG1063|consen 422 FVSGADEKVLRVFEAPKSFVKSLMAICGKCFKGSDELPDGANVPALGLSNKAFFPGETNTGGEAAVCAETPLAAAPCELT 501 (764)
T ss_pred eeecccceeeeeecCcHHHHHHHHHHhCccccCchhcccccccccccccCCCCcccccccccccceeeecccccCchhcc
Confidence 88999999999997521 000
Q ss_pred ----------------eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEEEeeCCC
Q 010759 372 ----------------VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLYSLNGHR 430 (502)
Q Consensus 372 ----------------~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~~~~h~ 430 (502)
++.+-+|.-.|++++.+|++. ++||++.. ..|++|+..+...++.+.+|.
T Consensus 502 ePP~EdqLq~~tLwPEv~KLYGHGyEv~~l~~s~~gn---------liASaCKS~~~ehAvI~lw~t~~W~~~~~L~~Hs 572 (764)
T KOG1063|consen 502 EPPTEDQLQQNTLWPEVHKLYGHGYEVYALAISPTGN---------LIASACKSSLKEHAVIRLWNTANWLQVQELEGHS 572 (764)
T ss_pred CCChHHHHHHhccchhhHHhccCceeEEEEEecCCCC---------EEeehhhhCCccceEEEEEeccchhhhheecccc
Confidence 011234566688888888775 78887754 359999999999999999999
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee-EEE---EecCCC-EEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 431 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI-VKT---YTGNGG-IFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~-~~~---~~~~~~-i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
-.|+.|+|||||+||+++|.|.++.+|....... ... ...+.. |++++|+|++.++|+|+.|.+|.||..
T Consensus 573 LTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~~~~~e~~fa~~k~HtRIIWdcsW~pde~~FaTaSRDK~VkVW~~ 647 (764)
T KOG1063|consen 573 LTVTRLAFSPDGRYLLSVSRDRTVSLYEVQEDIKDEFRFACLKAHTRIIWDCSWSPDEKYFATASRDKKVKVWEE 647 (764)
T ss_pred eEEEEEEECCCCcEEEEeecCceEEeeeeecccchhhhhccccccceEEEEcccCcccceeEEecCCceEEEEec
Confidence 9999999999999999999999999999854322 111 233444 789999999999999999999999965
No 98
>KOG0310 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=1.3e-27 Score=221.15 Aligned_cols=276 Identities=22% Similarity=0.348 Sum_probs=224.9
Q ss_pred ccceeEEEECCCCCE-EEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 154 TSEVCACAWSPAGSL-LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~~-l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
...|.+++|||...+ +|+++. -.+.||+..+.... +. ...-.+.|.+++|-.||++|+.|.
T Consensus 26 ~~~vssl~fsp~~P~d~aVt~S-~rvqly~~~~~~~~-------------k~----~srFk~~v~s~~fR~DG~LlaaGD 87 (487)
T KOG0310|consen 26 HNSVSSLCFSPKHPYDFAVTSS-VRVQLYSSVTRSVR-------------KT----FSRFKDVVYSVDFRSDGRLLAAGD 87 (487)
T ss_pred cCcceeEecCCCCCCceEEecc-cEEEEEecchhhhh-------------hh----HHhhccceeEEEeecCCeEEEccC
Confidence 356999999997543 444432 46788876543211 11 111246799999999999999999
Q ss_pred CCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC--Cc
Q 010759 233 YDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN--NV 308 (502)
Q Consensus 233 ~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~--~~ 308 (502)
..|.|+|+|.... ....+..|+.+|..+.|+|+++ .|++|+.|+.+++||+.+...+..+..|...+.+.++.+ +.
T Consensus 88 ~sG~V~vfD~k~r~iLR~~~ah~apv~~~~f~~~d~t~l~s~sDd~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~h 167 (487)
T KOG0310|consen 88 ESGHVKVFDMKSRVILRQLYAHQAPVHVTKFSPQDNTMLVSGSDDKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDH 167 (487)
T ss_pred CcCcEEEeccccHHHHHHHhhccCceeEEEecccCCeEEEecCCCceEEEEEcCCcEEEEEecCCcceeEeeccccCCCe
Confidence 9999999996542 4456889999999999999776 567888899999999999887557889999999998864 45
Q ss_pred eEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-eeeecccCCCcEEEEE
Q 010759 309 SFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIR 386 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~ 386 (502)
.+++++.|+.|++||++.. ..+..+ .|..+|..+.+-|.|.+||+++.. .+++||+.++. .+..+..|...|+|++
T Consensus 168 ivvtGsYDg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgGn-~vkVWDl~~G~qll~~~~~H~KtVTcL~ 245 (487)
T KOG0310|consen 168 IVVTGSYDGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGGN-SVKVWDLTTGGQLLTSMFNHNKTVTCLR 245 (487)
T ss_pred EEEecCCCceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCCC-eEEEEEecCCceehhhhhcccceEEEEE
Confidence 6889999999999999877 444444 588899999999999999999764 79999998554 4555556999999999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
+..++. .|+||+-|+.|++||+.+.+.++.+. ..++|.+++.+|+++.++.|..||.+.+=..
T Consensus 246 l~s~~~---------rLlS~sLD~~VKVfd~t~~Kvv~s~~-~~~pvLsiavs~dd~t~viGmsnGlv~~rr~ 308 (487)
T KOG0310|consen 246 LASDST---------RLLSGSLDRHVKVFDTTNYKVVHSWK-YPGPVLSIAVSPDDQTVVIGMSNGLVSIRRR 308 (487)
T ss_pred eecCCc---------eEeecccccceEEEEccceEEEEeee-cccceeeEEecCCCceEEEecccceeeeehh
Confidence 988774 68999999999999999999998887 6789999999999999999999998887643
No 99
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.96 E-value=1.3e-27 Score=229.72 Aligned_cols=329 Identities=20% Similarity=0.353 Sum_probs=250.7
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCC---CCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQ---NGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
.-+|.|+|...+|...-.|..++|||+.+-...++.. .+...++.+..+. ++-+..+-.| -|.+ .|++++.
T Consensus 327 ~IA~~Fdet~~klscVYndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p--~nv~~~~~ac---lp~~-cF~TCSs 400 (1080)
T KOG1408|consen 327 AIACQFDETTDKLSCVYNDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLP--CNVHSPTAAC---LPRG-CFTTCSS 400 (1080)
T ss_pred eeEEEecCCCceEEEEEcCceEEEEeccccccccceeeeeeccceeeeecccc--ccccCccccc---CCcc-ceeEecC
Confidence 3577899999999999999999999997654332211 1111111111110 0111111111 1222 4889999
Q ss_pred CCcEEEEECCC----ceeE----------------------------------eecCCCCCEEEEEecCCCCEEEEecCC
Q 010759 234 DGQARIWSTNG----DLKC----------------------------------TLSKHKGPIFSLKWNKKGDYLLTGSCD 275 (502)
Q Consensus 234 dg~i~iw~~~~----~~~~----------------------------------~~~~h~~~V~~l~~~~~~~~l~sgs~D 275 (502)
|++||+|++.. .... ........+.+++.+|+|++|++|..-
T Consensus 401 D~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~ 480 (1080)
T KOG1408|consen 401 DGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRG 480 (1080)
T ss_pred CCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCcc
Confidence 99999999754 1100 001123468999999999999999999
Q ss_pred CeEEEEeccCcceeEEeeecccCeEEEecCC----CceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCC-
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTG- 349 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~- 349 (502)
|.+++|++..-++...++.|...+.++.|.. +..+++++.|..|+++|+..+ .+++++.+|...|++|.|--.|
T Consensus 481 GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gl 560 (1080)
T KOG1408|consen 481 GNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGL 560 (1080)
T ss_pred CceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEecccccchhhhhcccccceeEEEEeecCC
Confidence 9999999999998889999999999998863 456889999999999999765 4677899999999999998877
Q ss_pred -CEEEEEeCCCcEEEEeCCC---Ccee--eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE
Q 010759 350 -SLLASCSDDVTAKIWNMKQ---DKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL 423 (502)
Q Consensus 350 -~~l~sgs~dg~i~iwd~~~---~~~~--~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~ 423 (502)
..+++|+.|..|.+--.+. +... ++-......++.++..|... ++++++.|.+|+|||+.+++.+
T Consensus 561 n~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k---------~v~t~cQDrnirif~i~sgKq~ 631 (1080)
T KOG1408|consen 561 NRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSK---------LVVTVCQDRNIRIFDIESGKQV 631 (1080)
T ss_pred ceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcc---------eEEEEecccceEEEecccccee
Confidence 6788999998775432221 2111 11111235678888888765 7899999999999999999999
Q ss_pred EEeeC---CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 424 YSLNG---HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 424 ~~~~~---h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
..|++ |.+..-.+...|.|-|||+...|.++.++|.-+|+.+....+++ .|+++-|.+|=++|.+.+.||+|+||.
T Consensus 632 k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~ 711 (1080)
T KOG1408|consen 632 KSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWK 711 (1080)
T ss_pred eeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeecccchhheeecCCceEEEEE
Confidence 99875 55677889999999999999999999999999999999888876 489999999999999999999999997
Q ss_pred e
Q 010759 500 F 500 (502)
Q Consensus 500 ~ 500 (502)
+
T Consensus 712 l 712 (1080)
T KOG1408|consen 712 L 712 (1080)
T ss_pred C
Confidence 6
No 100
>KOG1446 consensus Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2 [RNA processing and modification; Chromatin structure and dynamics; Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=6.1e-27 Score=206.18 Aligned_cols=242 Identities=20% Similarity=0.298 Sum_probs=200.2
Q ss_pred eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC-CCceEEEEcC--CCeEEEEEcC
Q 010759 249 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSST--DNMIYVCKIG 325 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--d~~i~~~~~~ 325 (502)
.+....+.|.++.|+++|.++++++.|-++++||..++..+.++..+...+..+.|. ....++.++. |.+|+..++.
T Consensus 9 ~f~~~~~~i~sl~fs~~G~~litss~dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~ 88 (311)
T KOG1446|consen 9 VFRETNGKINSLDFSDDGLLLITSSEDDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLH 88 (311)
T ss_pred ccccCCCceeEEEecCCCCEEEEecCCCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEee
Confidence 344456789999999999999999999999999999999998887776556555553 3333444444 8899999999
Q ss_pred CCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 326 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 326 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
.++-++.|.||...|++++.+|-+..+++++.|++|++||++..++..-+..... ..++|.|.|- ++|+
T Consensus 89 dNkylRYF~GH~~~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~--pi~AfDp~GL---------ifA~ 157 (311)
T KOG1446|consen 89 DNKYLRYFPGHKKRVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGR--PIAAFDPEGL---------IFAL 157 (311)
T ss_pred cCceEEEcCCCCceEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCC--cceeECCCCc---------EEEE
Confidence 9999999999999999999999999999999999999999998887666554333 3467889984 7888
Q ss_pred EeCCCeEEEEeCCCC--eEE--EEee-CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCC----EEE
Q 010759 406 ASFDSTVKLWDVELG--KLL--YSLN-GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGG----IFE 476 (502)
Q Consensus 406 gs~dg~i~iwd~~~~--~~~--~~~~-~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~----i~~ 476 (502)
+.....|++||++.- .+. +.+. +-....+.|.|||||++|+.+...+.+++.|.-+|.++.++..... ..+
T Consensus 158 ~~~~~~IkLyD~Rs~dkgPF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~~~ 237 (311)
T KOG1446|consen 158 ANGSELIKLYDLRSFDKGPFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLPLS 237 (311)
T ss_pred ecCCCeEEEEEecccCCCCceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCccee
Confidence 877779999999854 222 2232 3456789999999999999999999999999999999988876432 358
Q ss_pred EEECCCCCEEEEEECCCeEEEEEee
Q 010759 477 VCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 477 ~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+|+|||+++.+|+.||+|+||++.
T Consensus 238 a~ftPds~Fvl~gs~dg~i~vw~~~ 262 (311)
T KOG1446|consen 238 ATFTPDSKFVLSGSDDGTIHVWNLE 262 (311)
T ss_pred EEECCCCcEEEEecCCCcEEEEEcC
Confidence 8999999999999999999999974
No 101
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.96 E-value=3.3e-28 Score=225.29 Aligned_cols=284 Identities=19% Similarity=0.370 Sum_probs=234.0
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
.|..-|.++++|...++++|||. |.|||||+...... .|+..+.. ......|.++...|||+.|++|
T Consensus 417 ~HGEvVcAvtIS~~trhVyTgGk-gcVKVWdis~pg~k-----~PvsqLdc-------l~rdnyiRSckL~pdgrtLivG 483 (705)
T KOG0639|consen 417 AHGEVVCAVTISNPTRHVYTGGK-GCVKVWDISQPGNK-----SPVSQLDC-------LNRDNYIRSCKLLPDGRTLIVG 483 (705)
T ss_pred ccCcEEEEEEecCCcceeEecCC-CeEEEeeccCCCCC-----Cccccccc-------cCcccceeeeEecCCCceEEec
Confidence 47788999999999999999974 78999999654211 11111100 0113458899999999999999
Q ss_pred ECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 232 SYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 232 ~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
+.-.++.|||+... ++..+....-..+.|+.+|+.+..++|..||.|.|||+.+..
T Consensus 484 GeastlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~--------------------- 542 (705)
T KOG0639|consen 484 GEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQT--------------------- 542 (705)
T ss_pred cccceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccce---------------------
Confidence 99999999997542 333444444567899999999999999999999999997653
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
.++.|.||...+.||.+++||..|.||+.|.+||.||+++++.+.... ....|+++.++
T Consensus 543 --------------------~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhd-F~SQIfSLg~c 601 (705)
T KOG0639|consen 543 --------------------LVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHD-FSSQIFSLGYC 601 (705)
T ss_pred --------------------eeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhh-hhhhheecccC
Confidence 245678999999999999999999999999999999999987765432 34689999999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 389 PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
|++. +|+.|-.++.+.+-... +...+.+.-|...|.+|.|++.|+|+++.|.|..+..|...-|..+...
T Consensus 602 P~~d---------WlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasiFqs 671 (705)
T KOG0639|consen 602 PTGD---------WLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS 671 (705)
T ss_pred CCcc---------ceeeecccCcEEEEecC-CccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccceeec
Confidence 9986 78999999999887765 4455677779999999999999999999999999999999988877777
Q ss_pred ecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 469 TGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 469 ~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.....|.++..|.|.+++++|+.+....||.+
T Consensus 672 kE~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 672 KESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred cccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 77788999999999999999999988888875
No 102
>KOG0289 consensus mRNA splicing factor [General function prediction only]
Probab=99.96 E-value=1.4e-27 Score=217.57 Aligned_cols=236 Identities=25% Similarity=0.380 Sum_probs=204.6
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
...++++...+....+++|+.|.++.++|... +....+.||...|+.+.|+|+...+++++.|..|++|.......
T Consensus 219 ~pgi~ald~~~s~~~ilTGG~d~~av~~d~~s~q~l~~~~Gh~kki~~v~~~~~~~~v~~aSad~~i~vws~~~~s~--- 295 (506)
T KOG0289|consen 219 TPGITALDIIPSSSKILTGGEDKTAVLFDKPSNQILATLKGHTKKITSVKFHKDLDTVITASADEIIRVWSVPLSSE--- 295 (506)
T ss_pred CCCeeEEeecCCCCcceecCCCCceEEEecchhhhhhhccCcceEEEEEEeccchhheeecCCcceEEeeccccccC---
Confidence 34688888888878999999999999999764 56678999999999999999999999999999999997644321
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
......|.++|+.+..+|.|.||++++.|+++.+.|++++..
T Consensus 296 --------------------------------------~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~~ 337 (506)
T KOG0289|consen 296 --------------------------------------PTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGSQ 337 (506)
T ss_pred --------------------------------------ccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCcE
Confidence 123456889999999999999999999999999999999988
Q ss_pred eeeccc--CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe
Q 010759 372 VHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 372 ~~~~~~--~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs 449 (502)
+..... ..-.+++.+|+|+|- ++.+|..||.|+|||+.++..+..|.+|.++|..|+|+.+|.|||+++
T Consensus 338 lt~vs~~~s~v~~ts~~fHpDgL---------ifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~a 408 (506)
T KOG0289|consen 338 LTVVSDETSDVEYTSAAFHPDGL---------IFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAA 408 (506)
T ss_pred EEEEeeccccceeEEeeEcCCce---------EEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEe
Confidence 765543 233589999999994 899999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 450 LDKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
.|+.|++||++.-+..+++.-. ..+.+++|.+.|++|+.++.+-.|+++
T Consensus 409 dd~~V~lwDLRKl~n~kt~~l~~~~~v~s~~fD~SGt~L~~~g~~l~Vy~~ 459 (506)
T KOG0289|consen 409 DDGSVKLWDLRKLKNFKTIQLDEKKEVNSLSFDQSGTYLGIAGSDLQVYIC 459 (506)
T ss_pred cCCeEEEEEehhhcccceeeccccccceeEEEcCCCCeEEeecceeEEEEE
Confidence 9999999999998888887653 359999999999999999776454444
No 103
>KOG0275 consensus Conserved WD40 repeat-containing protein [General function prediction only]
Probab=99.96 E-value=4.1e-28 Score=213.30 Aligned_cols=239 Identities=22% Similarity=0.431 Sum_probs=204.9
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeE--------eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEe
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKC--------TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~--------~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd 282 (502)
..+.+-|..|||||+||++|+.||.|.+|+.. +.+.. .|--+..+|.|+.|+.+...+++|+.||.|++|.
T Consensus 212 ~KSh~EcA~FSPDgqyLvsgSvDGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWr 291 (508)
T KOG0275|consen 212 QKSHVECARFSPDGQYLVSGSVDGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWR 291 (508)
T ss_pred cccchhheeeCCCCceEeeccccceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEE
Confidence 34678999999999999999999999999964 32221 2445788999999999999999999999999999
Q ss_pred ccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
++++.+++.|. +.|+..|+|+.|+.|+..+.+++.|.++|
T Consensus 292 i~tG~ClRrFd----------------------------------------rAHtkGvt~l~FSrD~SqiLS~sfD~tvR 331 (508)
T KOG0275|consen 292 IETGQCLRRFD----------------------------------------RAHTKGVTCLSFSRDNSQILSASFDQTVR 331 (508)
T ss_pred EecchHHHHhh----------------------------------------hhhccCeeEEEEccCcchhhcccccceEE
Confidence 99887654432 26888899999999999999999999999
Q ss_pred EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEECC
Q 010759 363 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSP 440 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~sp 440 (502)
|--+++++++.+|++|..-|+...|.++|. .++++|.||+|++|+..+..|+.+++. ...+|+++-.-|
T Consensus 332 iHGlKSGK~LKEfrGHsSyvn~a~ft~dG~---------~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~P 402 (508)
T KOG0275|consen 332 IHGLKSGKCLKEFRGHSSYVNEATFTDDGH---------HIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLP 402 (508)
T ss_pred EeccccchhHHHhcCccccccceEEcCCCC---------eEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcC
Confidence 999999999999999999999999999996 688999999999999999999888764 346788887777
Q ss_pred CC-CEEEEEeCCCcEEEEeCCCCeeEEEEec----CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 441 TG-EYLASGSLDKSMHIWSLKEGKIVKTYTG----NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 441 dg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~----~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.. ..++.+...++|.|-++. |.+++++.. .+...+++.||.|.++...+.|+.++-|.+
T Consensus 403 Knpeh~iVCNrsntv~imn~q-GQvVrsfsSGkREgGdFi~~~lSpkGewiYcigED~vlYCF~~ 466 (508)
T KOG0275|consen 403 KNPEHFIVCNRSNTVYIMNMQ-GQVVRSFSSGKREGGDFINAILSPKGEWIYCIGEDGVLYCFSV 466 (508)
T ss_pred CCCceEEEEcCCCeEEEEecc-ceEEeeeccCCccCCceEEEEecCCCcEEEEEccCcEEEEEEe
Confidence 54 678888999999999874 788888853 245778899999999999999998877654
No 104
>KOG0640 consensus mRNA cleavage stimulating factor complex; subunit 1 [RNA processing and modification]
Probab=99.96 E-value=9.2e-28 Score=209.96 Aligned_cols=213 Identities=26% Similarity=0.497 Sum_probs=180.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-------------------ceeEeecCCCCCEEEEEecCCCCEEEE
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-------------------DLKCTLSKHKGPIFSLKWNKKGDYLLT 271 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-------------------~~~~~~~~h~~~V~~l~~~~~~~~l~s 271 (502)
.|..++.+.+||+||.++++|+.|..|+|.|++. ..+.++..|..+|..|.|+|....|++
T Consensus 110 ~HK~~cR~aafs~DG~lvATGsaD~SIKildvermlaks~~~em~~~~~qa~hPvIRTlYDH~devn~l~FHPre~ILiS 189 (430)
T KOG0640|consen 110 SHKSPCRAAAFSPDGSLVATGSADASIKILDVERMLAKSKPKEMISGDTQARHPVIRTLYDHVDEVNDLDFHPRETILIS 189 (430)
T ss_pred ecccceeeeeeCCCCcEEEccCCcceEEEeehhhhhhhcchhhhccCCcccCCceEeehhhccCcccceeecchhheEEe
Confidence 3577899999999999999999999999999641 134567789999999999999999999
Q ss_pred ecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE
Q 010759 272 GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 272 gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 351 (502)
|+.|++|+++|.......+ ..+.| ....+|.++.|+|.|.+
T Consensus 190 ~srD~tvKlFDfsK~saKr--------------------------------------A~K~~-qd~~~vrsiSfHPsGef 230 (430)
T KOG0640|consen 190 GSRDNTVKLFDFSKTSAKR--------------------------------------AFKVF-QDTEPVRSISFHPSGEF 230 (430)
T ss_pred ccCCCeEEEEecccHHHHH--------------------------------------HHHHh-hccceeeeEeecCCCce
Confidence 9999999999975432111 11111 12357899999999999
Q ss_pred EEEEeCCCcEEEEeCCCCceeeec---ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-
Q 010759 352 LASCSDDVTAKIWNMKQDKYVHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN- 427 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~~~~~~~---~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~- 427 (502)
|+.|..-.++++||+.+.++...- ..|.+.|+++.+++.++ +-++||.||.|+|||--+++|+.++.
T Consensus 231 llvgTdHp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~---------lYvTaSkDG~IklwDGVS~rCv~t~~~ 301 (430)
T KOG0640|consen 231 LLVGTDHPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGS---------LYVTASKDGAIKLWDGVSNRCVRTIGN 301 (430)
T ss_pred EEEecCCCceeEEeccceeEeeecCcccccccceeEEEecCCcc---------EEEEeccCCcEEeeccccHHHHHHHHh
Confidence 999999999999999988775433 35788999999999987 67899999999999998899988773
Q ss_pred CCC-CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC
Q 010759 428 GHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 428 ~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
+|. ..|.++.|..+|+||.+.|.|..|++|.+.+|+.++.|.+-
T Consensus 302 AH~gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 302 AHGGSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGA 346 (430)
T ss_pred hcCCceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecC
Confidence 454 46999999999999999999999999999999999999874
No 105
>KOG0300 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=3e-27 Score=207.35 Aligned_cols=274 Identities=25% Similarity=0.393 Sum_probs=216.5
Q ss_pred ccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc--
Q 010759 208 RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-- 284 (502)
Q Consensus 208 ~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~-- 284 (502)
.+.+|...|+.++-...-..+.+++.|.+.+||.++ +.++..+.+|.+.|.+++|++.+..++++|.|++..||...
T Consensus 143 e~~GHkDGiW~Vaa~~tqpi~gtASADhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~ 222 (481)
T KOG0300|consen 143 ELEGHKDGIWHVAADSTQPICGTASADHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVN 222 (481)
T ss_pred hhcccccceeeehhhcCCcceeecccccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhc
Confidence 344567778888776666789999999999999987 56777899999999999999999999999999999999621
Q ss_pred --CcceeEEeeecccCeEEEec-CCCceEEE---EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC
Q 010759 285 --TEEWKQQFEFHSGPTLDVDW-RNNVSFAT---SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 285 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d 358 (502)
...... -..|.+.- .... .....+.. .++..+|+ .|+..|.||.+.|.+..|-..|+.+++++.|
T Consensus 223 ~~vP~~~a-~~~hSsEe-E~e~sDe~~~d~d~~~~sD~~tiR-------vPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWD 293 (481)
T KOG0300|consen 223 WEVPSNNA-PSDHSSEE-EEEHSDEHNRDTDSSEKSDGHTIR-------VPLMRLTGHRAVVSACDWLAGGQQMVTASWD 293 (481)
T ss_pred CcCCCCCC-CCCCCchh-hhhcccccccccccccccCCceee-------eeeeeeeccccceEehhhhcCcceeeeeecc
Confidence 100000 00010000 0000 01111111 11222333 3677899999999999999999999999999
Q ss_pred CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEE
Q 010759 359 VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLA 437 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~ 437 (502)
.+..+||+.++.+++.+.+|....+.++-+|... ++++.|.|.+.|+||.+. -..+..|.||...|+++.
T Consensus 294 RTAnlwDVEtge~v~~LtGHd~ELtHcstHptQr---------LVvTsSrDtTFRLWDFReaI~sV~VFQGHtdtVTS~v 364 (481)
T KOG0300|consen 294 RTANLWDVETGEVVNILTGHDSELTHCSTHPTQR---------LVVTSSRDTTFRLWDFREAIQSVAVFQGHTDTVTSVV 364 (481)
T ss_pred ccceeeeeccCceeccccCcchhccccccCCcce---------EEEEeccCceeEeccchhhcceeeeecccccceeEEE
Confidence 9999999999999999999999988887766643 788999999999999983 345678999999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCC-eeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEG-KIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~-~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
|.-+ ..+++||+|.+|+|||+++. ..+.++.....++-++.+..+..||.-..|..|++||+
T Consensus 365 F~~d-d~vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAiPhDNRqvRlfDl 427 (481)
T KOG0300|consen 365 FNTD-DRVVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAIPHDNRQVRLFDL 427 (481)
T ss_pred EecC-CceeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEeccCCceEEEEec
Confidence 9865 56899999999999999874 46788888889999999999999999999999999997
No 106
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.96 E-value=2.5e-25 Score=206.53 Aligned_cols=337 Identities=20% Similarity=0.338 Sum_probs=248.3
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCC--------cEEEEec------------CCCCC-C--CCCCCCC------
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDS--------TARIWTI------------ADGTS-N--GGAQNGP------ 196 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~--------~i~iW~~------------~~~~~-~--~~~~~~~------ 196 (502)
..+.+-||+..|-|++.+|+.-.+++|-.-| .++|||. ..+.. . .+...+.
T Consensus 96 ~Qr~y~GH~ddikc~~vHPdri~vatGQ~ag~~g~~~~phvriWdsv~L~TL~V~g~f~~GV~~vaFsk~~~G~~l~~vD 175 (626)
T KOG2106|consen 96 SQRHYLGHNDDIKCMAVHPDRIRVATGQGAGTSGRPLQPHVRIWDSVTLSTLHVIGFFDRGVTCVAFSKINGGSLLCAVD 175 (626)
T ss_pred hcccccCCCCceEEEeecCCceeeccCcccccCCCcCCCeeeecccccceeeeeeccccccceeeeecccCCCceEEEec
Confidence 3456778999999999999998999876555 4899992 22200 0 0011111
Q ss_pred ------ceEEE--EEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCcee----EeecCC-CCCEEEEEec
Q 010759 197 ------LNVLV--LKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK----CTLSKH-KGPIFSLKWN 263 (502)
Q Consensus 197 ------~~~~~--~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~----~~~~~h-~~~V~~l~~~ 263 (502)
+.++. .+...+........|....|+|.+.-++....-+.+.+|+..+... ..|.++ +.-|.+++|.
T Consensus 176 ~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~l~k~~~~fek~ekk~Vl~v~F~ 255 (626)
T KOG2106|consen 176 DSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGSLVKRQGIFEKREKKFVLCVTFL 255 (626)
T ss_pred CCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCceEEEeeccccccceEEEEEEEc
Confidence 00000 0111111122345677889999665555555568999999875432 233333 3569999999
Q ss_pred CCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC--c---------ce--
Q 010759 264 KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN--R---------PI-- 330 (502)
Q Consensus 264 ~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~--~---------~~-- 330 (502)
++|+ +++|.++|.|.||+..+....++...|.+.+.++....+..+++++.|..|..|+-.-. + ++
T Consensus 256 engd-viTgDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllSGgKDRki~~Wd~~y~k~r~~elPe~~G~iRt 334 (626)
T KOG2106|consen 256 ENGD-VITGDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLSGGKDRKIILWDDNYRKLRETELPEQFGPIRT 334 (626)
T ss_pred CCCC-EEeecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEeecCccceEEeccccccccccccCchhcCCeeE
Confidence 9985 78999999999999988888777779999999998888888888999999999983211 0 11
Q ss_pred ---------------------------eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 331 ---------------------------KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 331 ---------------------------~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
....+|......++.+|+..+++|++.|+.+++|+ ..++.-+. ....++.
T Consensus 335 v~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~gqdk~v~lW~--~~k~~wt~-~~~d~~~ 411 (626)
T KOG2106|consen 335 VAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCGQDKHVRLWN--DHKLEWTK-IIEDPAE 411 (626)
T ss_pred EecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeeccCcceEEEcc--CCceeEEE-EecCcee
Confidence 11236777888999999999999999999999999 33433322 2346788
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC-
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG- 462 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~- 462 (502)
++.|+|.| .+|.|+..|...+.|.++...+..-.. ..++++++|+|+|.+||.||.|+.|+||.+...
T Consensus 412 ~~~fhpsg----------~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g 480 (626)
T KOG2106|consen 412 CADFHPSG----------VVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANG 480 (626)
T ss_pred EeeccCcc----------eEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEEEecCCCeEEEEEECCCC
Confidence 99999988 588999999999999998666655554 889999999999999999999999999998754
Q ss_pred eeEE---EEecCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 463 KIVK---TYTGNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 463 ~~~~---~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
.... ...+ ..|+.+.||+|+++|.+-+.|-.|-+|
T Consensus 481 ~~y~r~~k~~g-s~ithLDwS~Ds~~~~~~S~d~eiLyW 518 (626)
T KOG2106|consen 481 RKYSRVGKCSG-SPITHLDWSSDSQFLVSNSGDYEILYW 518 (626)
T ss_pred cEEEEeeeecC-ceeEEeeecCCCceEEeccCceEEEEE
Confidence 3322 2233 569999999999999999999888888
No 107
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.5e-27 Score=202.08 Aligned_cols=254 Identities=26% Similarity=0.412 Sum_probs=197.3
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CCC
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGT 226 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~~ 226 (502)
+-.+|.+.|+.+...--|++|||+|.|++|||+.+..... . ..+ ....+|++||.-++|-. -|.
T Consensus 6 idt~H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~--------s--~ll----~~L~Gh~GPVwqv~wahPk~G~ 71 (299)
T KOG1332|consen 6 IDTQHEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQ--------S--KLL----AELTGHSGPVWKVAWAHPKFGT 71 (299)
T ss_pred hhhhhhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCC--------c--eee----eEecCCCCCeeEEeecccccCc
Confidence 3457999999998888899999999999999999865431 0 111 22346789999999976 799
Q ss_pred EEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCC--CEEEEecCCCeEEEEeccCc-ceeEEeeecccCeE
Q 010759 227 LLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKG--DYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTL 300 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~--~~l~sgs~D~~v~iwd~~~~-~~~~~~~~~~~~~~ 300 (502)
+|+|+++||.|.||..++. .......|...|.+++|.|.+ -.|+++++||.|.|.+.+.. .+..
T Consensus 72 iLAScsYDgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t---------- 141 (299)
T KOG1332|consen 72 ILASCSYDGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTT---------- 141 (299)
T ss_pred EeeEeecCceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEeeCCCcEEEEEEcCCCCccc----------
Confidence 9999999999999997654 334567899999999999864 57899999999999987643 2110
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC---C-----------CEEEEEeCCCcEEEEeC
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---G-----------SLLASCSDDVTAKIWNM 366 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---~-----------~~l~sgs~dg~i~iwd~ 366 (502)
-+....|.-.|++++|.|- | +.|++|+.|..|+||+.
T Consensus 142 -----------------------------~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~ 192 (299)
T KOG1332|consen 142 -----------------------------SKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKF 192 (299)
T ss_pred -----------------------------hhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeec
Confidence 1123356666777777664 3 56999999999999998
Q ss_pred CCCce--eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEeeCCCCCEEEEEECCC
Q 010759 367 KQDKY--VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 367 ~~~~~--~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~spd 441 (502)
..+.. -++|.+|..-|..++|+|.... .+..|||+|.||+|.||-.+.... ...+.....+++.++||+.
T Consensus 193 ~~~~w~~e~~l~~H~dwVRDVAwaP~~gl-----~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f~~~~w~vSWS~s 267 (299)
T KOG1332|consen 193 DSDSWKLERTLEGHKDWVRDVAWAPSVGL-----PKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEFPDVVWRVSWSLS 267 (299)
T ss_pred CCcchhhhhhhhhcchhhhhhhhccccCC-----CceeeEEecCCCcEEEEEecCccCcccccccccCCcceEEEEEecc
Confidence 87643 3558899999999999997532 235799999999999998763211 1223345678999999999
Q ss_pred CCEEEEEeCCCcEEEEeCC
Q 010759 442 GEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~~~ 460 (502)
|.+|+.++.|+.|.+|.-.
T Consensus 268 Gn~LaVs~GdNkvtlwke~ 286 (299)
T KOG1332|consen 268 GNILAVSGGDNKVTLWKEN 286 (299)
T ss_pred ccEEEEecCCcEEEEEEeC
Confidence 9999999999999999754
No 108
>KOG0772 consensus Uncharacterized conserved protein, contains WD40 repeat [Function unknown]
Probab=99.96 E-value=1e-27 Score=222.79 Aligned_cols=252 Identities=23% Similarity=0.409 Sum_probs=191.2
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCce------eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~------~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~ 284 (502)
.+++.|.++++.|.|-.|+||+.|-+|++||..+.- ..........|.++.|++.|+.|++.+.....+|+|-.
T Consensus 165 hgtk~Vsal~~Dp~GaR~~sGs~Dy~v~~wDf~gMdas~~~fr~l~P~E~h~i~sl~ys~Tg~~iLvvsg~aqakl~DRd 244 (641)
T KOG0772|consen 165 HGTKIVSALAVDPSGARFVSGSLDYTVKFWDFQGMDASMRSFRQLQPCETHQINSLQYSVTGDQILVVSGSAQAKLLDRD 244 (641)
T ss_pred CCceEEEEeeecCCCceeeeccccceEEEEecccccccchhhhccCcccccccceeeecCCCCeEEEEecCcceeEEccC
Confidence 457889999999999999999999999999987531 11223345678999999999999999989999999965
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKI 363 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~i 363 (502)
..++.....+ |. |+-|+ ..-.||...++|.+|+|+. ..|+|++.||++||
T Consensus 245 G~~~~e~~KG---------------------DQ--YI~Dm------~nTKGHia~lt~g~whP~~k~~FlT~s~DgtlRi 295 (641)
T KOG0772|consen 245 GFEIVEFSKG---------------------DQ--YIRDM------YNTKGHIAELTCGCWHPDNKEEFLTCSYDGTLRI 295 (641)
T ss_pred Cceeeeeecc---------------------ch--hhhhh------hccCCceeeeeccccccCcccceEEecCCCcEEE
Confidence 5544432221 11 11121 2346899999999999986 46899999999999
Q ss_pred EeCCCCc-eeeecc-----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEeeCCCC--C
Q 010759 364 WNMKQDK-YVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSLNGHRE--P 432 (502)
Q Consensus 364 wd~~~~~-~~~~~~-----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~--~ 432 (502)
|++...+ ....++ +..-++++++|+|+|. +||+|..||.|.+|+...... .+.-.+|.. .
T Consensus 296 Wdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~---------~iAagc~DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~ 366 (641)
T KOG0772|consen 296 WDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGK---------LIAAGCLDGSIQIWDKGSRTVRPVMKVKDAHLPGQD 366 (641)
T ss_pred EecCCchhheeEEeeccCCCcccCceeeecCCCcc---------hhhhcccCCceeeeecCCcccccceEeeeccCCCCc
Confidence 9987543 222221 2233678999999997 689999999999999864322 233457876 8
Q ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-eEEEEec---CCCEEEEEECCCCCEEEEEEC------CCeEEEEEe
Q 010759 433 VYSLAFSPTGEYLASGSLDKSMHIWSLKEGK-IVKTYTG---NGGIFEVCWNKEGDKIAACFA------NHTVCVLDF 500 (502)
Q Consensus 433 v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~-~~~~~~~---~~~i~~~~ws~~g~~la~~~~------~~~v~v~~~ 500 (502)
|+||+||+||++|++-|.|+++++||++..+ .+.++.+ .-..+.++|||+.++|++|.. -|.+++||-
T Consensus 367 Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~ 444 (641)
T KOG0772|consen 367 ITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDR 444 (641)
T ss_pred eeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEec
Confidence 9999999999999999999999999998753 4555544 234578999999999999854 246777763
No 109
>KOG1332 consensus Vesicle coat complex COPII, subunit SEC13 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.96 E-value=1.3e-27 Score=202.50 Aligned_cols=247 Identities=26% Similarity=0.503 Sum_probs=195.4
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecC--CCCEEEEecCCCeEEEEeccC
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~~ 285 (502)
|...|..+...--|+.|++++.|++|+|+.... .+..++.+|.+||+.++|.. -|..|+++|.||.|.||.-.+
T Consensus 10 H~D~IHda~lDyygkrlATcsSD~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~ 89 (299)
T KOG1332|consen 10 HEDMIHDAQLDYYGKRLATCSSDGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEEN 89 (299)
T ss_pred hhhhhhHhhhhhhcceeeeecCCccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCC
Confidence 455566666666789999999999999998643 45678999999999999965 789999999999999998776
Q ss_pred cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEE
Q 010759 286 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKI 363 (502)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~i 363 (502)
+.+.+ ...+..|.+.|++|+|-|. |-+|++++.||.|.|
T Consensus 90 g~w~k---------------------------------------~~e~~~h~~SVNsV~wapheygl~LacasSDG~vsv 130 (299)
T KOG1332|consen 90 GRWTK---------------------------------------AYEHAAHSASVNSVAWAPHEYGLLLACASSDGKVSV 130 (299)
T ss_pred Cchhh---------------------------------------hhhhhhhcccceeecccccccceEEEEeeCCCcEEE
Confidence 65432 2345678999999999886 567999999999999
Q ss_pred EeCCCC-ce--eeecccCCCcEEEEEEccCCCC---CC-CCC-CcEEEEEEeCCCeEEEEeCCCCe--EEEEeeCCCCCE
Q 010759 364 WNMKQD-KY--VHDLREHSKEIYTIRWSPTGSG---TN-NPN-QQLILASASFDSTVKLWDVELGK--LLYSLNGHREPV 433 (502)
Q Consensus 364 wd~~~~-~~--~~~~~~~~~~i~~~~~sp~g~~---~~-~~~-~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v 433 (502)
.+.+.. .. ......|.-.|+++.|.|.... .. .+. .-.-|+||+.|..|+||+..+++ .-.++.+|.+.|
T Consensus 131 l~~~~~g~w~t~ki~~aH~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e~~l~~H~dwV 210 (299)
T KOG1332|consen 131 LTYDSSGGWTTSKIVFAHEIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLERTLEGHKDWV 210 (299)
T ss_pred EEEcCCCCccchhhhhccccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhhhhhhhcchhh
Confidence 987755 11 2334578889999999997321 11 111 12358999999999999998763 234588999999
Q ss_pred EEEEECCCC----CEEEEEeCCCcEEEEeCCCC------eeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 434 YSLAFSPTG----EYLASGSLDKSMHIWSLKEG------KIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 434 ~~l~~spdg----~~lasgs~Dg~i~iw~~~~~------~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.+++|.|.- .+||++|.||+|.||..... +++..| ...++.++||+.|+.||.+..|..|.+|-
T Consensus 211 RDVAwaP~~gl~~s~iAS~SqDg~viIwt~~~e~e~wk~tll~~f--~~~~w~vSWS~sGn~LaVs~GdNkvtlwk 284 (299)
T KOG1332|consen 211 RDVAWAPSVGLPKSTIASCSQDGTVIIWTKDEEYEPWKKTLLEEF--PDVVWRVSWSLSGNILAVSGGDNKVTLWK 284 (299)
T ss_pred hhhhhccccCCCceeeEEecCCCcEEEEEecCccCcccccccccC--CcceEEEEEeccccEEEEecCCcEEEEEE
Confidence 999999974 58999999999999987621 233332 45689999999999999999999999984
No 110
>KOG0288 consensus WD40 repeat protein TipD [General function prediction only]
Probab=99.96 E-value=2.8e-28 Score=220.99 Aligned_cols=241 Identities=23% Similarity=0.352 Sum_probs=210.8
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc--eeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEc
Q 010759 248 CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKI 324 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~ 324 (502)
..+..|.+.|..+.|-++...|++|+.|..|++|++...+ .+.++.+..+++..++|. ++..+++++.|+.+++|++
T Consensus 169 ~~ld~h~gev~~v~~l~~sdtlatgg~Dr~Ik~W~v~~~k~~~~~tLaGs~g~it~~d~d~~~~~~iAas~d~~~r~Wnv 248 (459)
T KOG0288|consen 169 FVLDAHEGEVHDVEFLRNSDTLATGGSDRIIKLWNVLGEKSELISTLAGSLGNITSIDFDSDNKHVIAASNDKNLRLWNV 248 (459)
T ss_pred hhhhccccccceeEEccCcchhhhcchhhhhhhhhcccchhhhhhhhhccCCCcceeeecCCCceEEeecCCCceeeeec
Confidence 3567799999999999999999999999999999987665 677788888899999995 5677888999999999999
Q ss_pred CCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 325 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 325 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
...+...++.||+..|+++.|......+++|+.|.+|++||+....+..++.. ...+..|..++ ..++
T Consensus 249 d~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt~l~-~S~cnDI~~~~-----------~~~~ 316 (459)
T KOG0288|consen 249 DSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKTVLP-GSQCNDIVCSI-----------SDVI 316 (459)
T ss_pred cchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheeccccc-cccccceEecc-----------eeee
Confidence 99999999999999999999998777799999999999999998877766542 34455555542 2578
Q ss_pred EEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-----CCEEEEEE
Q 010759 405 SASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-----GGIFEVCW 479 (502)
Q Consensus 405 sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-----~~i~~~~w 479 (502)
||-.|++||+||.+...++.++..+. .|++|..+++|.-|.+++.|.++.+.|+++..+.++|... ...+.++|
T Consensus 317 SgH~DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~eI~~~~sA~g~k~asDwtrvvf 395 (459)
T KOG0288|consen 317 SGHFDKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKEIRQTFSAEGFKCASDWTRVVF 395 (459)
T ss_pred ecccccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeecccccEEEEeeccccccccccceeEE
Confidence 99999999999999999999998775 8999999999999999999999999999999988888653 34788999
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010759 480 NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~~~ 501 (502)
||+|.|+|+|+.||.|+||++.
T Consensus 396 Spd~~YvaAGS~dgsv~iW~v~ 417 (459)
T KOG0288|consen 396 SPDGSYVAAGSADGSVYIWSVF 417 (459)
T ss_pred CCCCceeeeccCCCcEEEEEcc
Confidence 9999999999999999999873
No 111
>KOG0294 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.96 E-value=2e-26 Score=202.20 Aligned_cols=260 Identities=17% Similarity=0.349 Sum_probs=209.3
Q ss_pred EEEEECCCcEEEEECCCc-------------eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 228 LATGSYDGQARIWSTNGD-------------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~-------------~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
|+.|++...|.-+++... ....+..|.+++++|+.+ +.+++|||.|-+|+|||+++......+-.
T Consensus 4 iIvGtYE~~i~Gf~l~~~~~~~~~s~~~~l~~lF~~~aH~~sitavAVs--~~~~aSGssDetI~IYDm~k~~qlg~ll~ 81 (362)
T KOG0294|consen 4 IIVGTYEHVILGFKLDPEPKGCTDSVKPTLKPLFAFSAHAGSITALAVS--GPYVASGSSDETIHIYDMRKRKQLGILLS 81 (362)
T ss_pred EEEeeeeeEEEEEEeccCccccccccceeeeccccccccccceeEEEec--ceeEeccCCCCcEEEEeccchhhhcceec
Confidence 566777777666654211 123567899999999875 78999999999999999999988888899
Q ss_pred cccCeEEEecCCCc---eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 295 HSGPTLDVDWRNNV---SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 295 ~~~~~~~~~~~~~~---~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
|.+.++++.|.... .+++++.||.|.+|+.+....+..+++|.+.|+.+++||.|++-++.+.|+.+++|++-.++.
T Consensus 82 HagsitaL~F~~~~S~shLlS~sdDG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~ 161 (362)
T KOG0294|consen 82 HAGSITALKFYPPLSKSHLLSGSDDGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGRV 161 (362)
T ss_pred cccceEEEEecCCcchhheeeecCCCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCcc
Confidence 99999999987665 799999999999999999999999999999999999999999999999999999999988765
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
-..++-. ..-+.+.|+|.|. .++.++. ..|-+|.+.+.+....+.. ...+.++.|- ++.+|++|+.|
T Consensus 162 a~v~~L~-~~at~v~w~~~Gd---------~F~v~~~-~~i~i~q~d~A~v~~~i~~-~~r~l~~~~l-~~~~L~vG~d~ 228 (362)
T KOG0294|consen 162 AFVLNLK-NKATLVSWSPQGD---------HFVVSGR-NKIDIYQLDNASVFREIEN-PKRILCATFL-DGSELLVGGDN 228 (362)
T ss_pred ceeeccC-CcceeeEEcCCCC---------EEEEEec-cEEEEEecccHhHhhhhhc-cccceeeeec-CCceEEEecCC
Confidence 4433321 2234489999886 3444443 4689999887666554432 2457777774 57899999999
Q ss_pred CcEEEEeCCCCeeEEEEecCC-CEEEEE--ECCCCCEEEEEECCCeEEEEEeeC
Q 010759 452 KSMHIWSLKEGKIVKTYTGNG-GIFEVC--WNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~~~-~i~~~~--ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
+.|.+||..++..+..+..+. +|-++. -+|++.+|++++.||.|+|||++|
T Consensus 229 ~~i~~~D~ds~~~~~~~~AH~~RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~ 282 (362)
T KOG0294|consen 229 EWISLKDTDSDTPLTEFLAHENRVKDIASYTNPEHEYLVTASSDGFIKVWDIDM 282 (362)
T ss_pred ceEEEeccCCCccceeeecchhheeeeEEEecCCceEEEEeccCceEEEEEccc
Confidence 999999999888777776653 466655 378899999999999999999986
No 112
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.96 E-value=3e-27 Score=223.38 Aligned_cols=293 Identities=24% Similarity=0.380 Sum_probs=232.5
Q ss_pred CccccCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 138 ESFEIPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 138 ~~~~~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
....+|..+...++||++.|.||+..|.|.+||+||.||+||||.+.+|.+.. ++.- .+.|.
T Consensus 384 dLrPFPt~~~lvyrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr-------------~~~~-----d~~I~ 445 (733)
T KOG0650|consen 384 DLRPFPTRCALVYRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVR-------------TVQF-----DSEIR 445 (733)
T ss_pred hcCCCcceeeeeEeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEE-------------EEee-----cceeE
Confidence 44456777788999999999999999999999999999999999999886532 2211 34689
Q ss_pred EEEECCCCCE--EEEEECCC--------------------------------cEEEEECCC-----ceeEeecCCCCCEE
Q 010759 218 TLDWNGEGTL--LATGSYDG--------------------------------QARIWSTNG-----DLKCTLSKHKGPIF 258 (502)
Q Consensus 218 ~l~~s~~~~~--l~sg~~dg--------------------------------~i~iw~~~~-----~~~~~~~~h~~~V~ 258 (502)
|++|+|.+.. |+.+-... .+..|.... .-++....|..+|.
T Consensus 446 ~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~ 525 (733)
T KOG0650|consen 446 SVAWNPLSDLCVLAVAVGECVLIVNPIFGDRLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIR 525 (733)
T ss_pred EEEecCCCCceeEEEEecCceEEeCccccchhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccc
Confidence 9999987643 33332222 222333210 01234456889999
Q ss_pred EEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC
Q 010759 259 SLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 259 ~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 335 (502)
.+.||..|.||++...+ ..|.|+++........|....+.+..+.|++...+...++...|++|++.....++.+..
T Consensus 526 ~vtWHrkGDYlatV~~~~~~~~VliHQLSK~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vRiYdL~kqelvKkL~t 605 (733)
T KOG0650|consen 526 QVTWHRKGDYLATVMPDSGNKSVLIHQLSKRKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVRIYDLSKQELVKKLLT 605 (733)
T ss_pred eeeeecCCceEEEeccCCCcceEEEEecccccccCchhhcCCceeEEEecCCCceEEEEeccceEEEehhHHHHHHHHhc
Confidence 99999999999987664 578999998777666677777888999998877777677788999999988777777766
Q ss_pred CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC-CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEE
Q 010759 336 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKL 414 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~i 414 (502)
....|..++.||.|..|+.|+.|+.+..||+.- .++.++++.|...+++++|++.-. ++++|+.||++.|
T Consensus 606 g~kwiS~msihp~GDnli~gs~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryP---------Lfas~sdDgtv~V 676 (733)
T KOG0650|consen 606 GSKWISSMSIHPNGDNLILGSYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYP---------LFASGSDDGTVIV 676 (733)
T ss_pred CCeeeeeeeecCCCCeEEEecCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccc---------eeeeecCCCcEEE
Confidence 677899999999999999999999999999874 467788999999999999988654 8999999999999
Q ss_pred EeCCC---------CeEEEEeeCCCCC----EEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 415 WDVEL---------GKLLYSLNGHREP----VYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 415 wd~~~---------~~~~~~~~~h~~~----v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
+.-.. --++..+.+|... |.++.|+|.-.||.++|.||+|++|
T Consensus 677 fhg~VY~Dl~qnpliVPlK~L~gH~~~~~~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 677 FHGMVYNDLLQNPLIVPLKRLRGHEKTNDLGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred EeeeeehhhhcCCceEeeeeccCceeecccceEeecccCCCceEEecCCCceEEee
Confidence 85321 1245678888755 8999999999999999999999998
No 113
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=1.1e-26 Score=213.51 Aligned_cols=256 Identities=26% Similarity=0.519 Sum_probs=201.6
Q ss_pred cccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC-CCEE
Q 010759 151 EGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-GTLL 228 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~~~l 228 (502)
-.|.+.|+.+++-|+. ..+||++..+.|.|||................-+. +.+ |.+.=+.|+|++. .-+|
T Consensus 121 i~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~---L~g----H~~eg~glsWn~~~~g~L 193 (422)
T KOG0264|consen 121 INHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLR---LKG----HEKEGYGLSWNRQQEGTL 193 (422)
T ss_pred ccCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceE---EEe----ecccccccccccccceeE
Confidence 4599999999999975 57888889999999998764433222111011111 222 2333566999984 3578
Q ss_pred EEEECCCcEEEEECCCc--------eeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 229 ATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
++|+.|++|++||++.. ....+.+|...|..++|++.. ..|.+++.|+.+.|||++++.
T Consensus 194 ls~~~d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R~~~------------ 261 (422)
T KOG0264|consen 194 LSGSDDHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTRSNT------------ 261 (422)
T ss_pred eeccCCCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcCCCC------------
Confidence 99999999999997532 345688999999999999966 467899999999999998631
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCC-ceeeeccc
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQD-KYVHDLRE 377 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~ 377 (502)
.++.....+|.++|+|++|+|- +.+|||||.|++|.+||+++. ++++++..
T Consensus 262 ---------------------------~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~ 314 (422)
T KOG0264|consen 262 ---------------------------SKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEG 314 (422)
T ss_pred ---------------------------CCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccC
Confidence 1233455689999999999995 567899999999999999875 45788999
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--------------eEEEEeeCCCCCEEEEEECCCCC
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--------------KLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--------------~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
|...|..|.|+|+.. .+|||++.|+.+.+||+..- ++++.-.||...|..+.|+|+..
T Consensus 315 H~dev~~V~WSPh~e--------tvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~eP 386 (422)
T KOG0264|consen 315 HEDEVFQVEWSPHNE--------TVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEP 386 (422)
T ss_pred CCcceEEEEeCCCCC--------ceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCC
Confidence 999999999999865 48999999999999998531 34678889999999999999987
Q ss_pred E-EEEEeCCCcEEEEeCC
Q 010759 444 Y-LASGSLDKSMHIWSLK 460 (502)
Q Consensus 444 ~-lasgs~Dg~i~iw~~~ 460 (502)
+ |+|++.|+.+.||...
T Consensus 387 W~I~SvaeDN~LqIW~~s 404 (422)
T KOG0264|consen 387 WTIASVAEDNILQIWQMA 404 (422)
T ss_pred eEEEEecCCceEEEeecc
Confidence 6 5788999999999865
No 114
>KOG0308 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=2.9e-27 Score=225.62 Aligned_cols=231 Identities=24% Similarity=0.437 Sum_probs=199.5
Q ss_pred CCCCEEEEEECCCcEEEEECCCc-------eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 223 GEGTLLATGSYDGQARIWSTNGD-------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~~-------~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
|.++||++||.||.|++|+.... ....+..|..-|..+....+++.|+|+|.|-+|++|+.....
T Consensus 35 ~~~ryLfTgGRDg~i~~W~~~~d~~~~s~~~~asme~HsDWVNDiiL~~~~~tlIS~SsDtTVK~W~~~~~~-------- 106 (735)
T KOG0308|consen 35 PNGRYLFTGGRDGIIRLWSVTQDSNEPSTPYIASMEHHSDWVNDIILCGNGKTLISASSDTTVKVWNAHKDN-------- 106 (735)
T ss_pred CCCceEEecCCCceEEEeccccccCCcccchhhhhhhhHhHHhhHHhhcCCCceEEecCCceEEEeecccCc--------
Confidence 46788999999999999986421 245678899999999988899999999999999999975431
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEE-cCCCCEEEEEeCCCcEEEEeCCCC--cee
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW-DPTGSLLASCSDDVTAKIWNMKQD--KYV 372 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~l~sgs~dg~i~iwd~~~~--~~~ 372 (502)
..++.++..|...|.|+++ -++..++||||.|+.|.+||+.++ ..+
T Consensus 107 -------------------------------~~c~stir~H~DYVkcla~~ak~~~lvaSgGLD~~IflWDin~~~~~l~ 155 (735)
T KOG0308|consen 107 -------------------------------TFCMSTIRTHKDYVKCLAYIAKNNELVASGGLDRKIFLWDINTGTATLV 155 (735)
T ss_pred -------------------------------chhHhhhhcccchheeeeecccCceeEEecCCCccEEEEEccCcchhhh
Confidence 0123466789999999999 788999999999999999999876 222
Q ss_pred e--------ecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC
Q 010759 373 H--------DLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 373 ~--------~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
. .+. ++...|++++..+.|. ++++|+..+.|++||.++++.+..+.||+..|.+|..++||+
T Consensus 156 ~s~n~~t~~sl~sG~k~siYSLA~N~t~t---------~ivsGgtek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt 226 (735)
T KOG0308|consen 156 ASFNNVTVNSLGSGPKDSIYSLAMNQTGT---------IIVSGGTEKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGT 226 (735)
T ss_pred hhccccccccCCCCCccceeeeecCCcce---------EEEecCcccceEEeccccccceeeeeccccceEEEEEcCCCC
Confidence 2 223 5677899999988874 899999999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 444 YLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+++||.||+|++||+...+.+.++.. ..+|+++.-+|+=+++.+|+.||.|..=|+|
T Consensus 227 ~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~vYsG~rd~~i~~Tdl~ 285 (735)
T KOG0308|consen 227 RLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHVYSGGRDGNIYRTDLR 285 (735)
T ss_pred eEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceEEecCCCCcEEecccC
Confidence 999999999999999999999999864 4569999999999999999999999887775
No 115
>KOG1408 consensus WD40 repeat protein [Function unknown]
Probab=99.95 E-value=8.2e-27 Score=224.32 Aligned_cols=303 Identities=22% Similarity=0.332 Sum_probs=232.9
Q ss_pred ccccccceeEEEECC------C-----CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEe--------------
Q 010759 150 LEGHTSEVCACAWSP------A-----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH-------------- 204 (502)
Q Consensus 150 l~~H~~~V~~~~~sp------d-----~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~-------------- 204 (502)
+--|...|..+.--| . ..-+.|+|.|++||+|++..+.........++....++.
T Consensus 365 ~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRlW~l~~ctnn~vyrRNils~~l~ki~y~d~~~q~~~d~~ 444 (1080)
T KOG1408|consen 365 MLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRLWDLAFCTNNQVYRRNILSANLSKIPYEDSTQQIMHDAS 444 (1080)
T ss_pred eeeccceeeeeccccccccCcccccCCccceeEecCCCcEEEeecccccccceeecccchhhhhcCccccCchhhhhhcc
Confidence 344666666554333 0 124889999999999999764332211111000000000
Q ss_pred ---e---ecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCC---CCEEEEecC
Q 010759 205 ---V---KGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKK---GDYLLTGSC 274 (502)
Q Consensus 205 ---~---~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~---~~~l~sgs~ 274 (502)
+ -...-...-.|.+++.||+|++|++|..-|+++||++.. ...+.+..|...|.+|.|+.- ...|++++.
T Consensus 445 ~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasr 524 (1080)
T KOG1408|consen 445 AGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASR 524 (1080)
T ss_pred CCcccccchhhcCcccceEEEEECCCcceecccCccCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccC
Confidence 0 000011234699999999999999999999999999864 455678899999999999852 357899999
Q ss_pred CCeEEEEecc-CcceeEEeeecccCeEEEecCC---CceEEEEcCCCeEEEEEcCCCcceeeecCCC-----cceeEEEE
Q 010759 275 DKTAIVWDVK-TEEWKQQFEFHSGPTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKW 345 (502)
Q Consensus 275 D~~v~iwd~~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-----~~v~~v~~ 345 (502)
|+.|.+||+. +-.+++++..|...+.++.|.. +...++++.|+.|++-..+.......|..|+ ..+..++.
T Consensus 525 dRlIHV~Dv~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~V 604 (1080)
T KOG1408|consen 525 DRLIHVYDVKRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAV 604 (1080)
T ss_pred CceEEEEecccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeee
Confidence 9999999985 4457788999999999999853 4678899999988764433222223333332 45788999
Q ss_pred cCCCCEEEEEeCCCcEEEEeCCCCceeeeccc---CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010759 346 DPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 422 (502)
Q Consensus 346 ~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 422 (502)
.|+.+++++++.|..|+||++.+++.++.|++ |.+....+...|.|- ||++...|.++.++|..+|++
T Consensus 605 dp~~k~v~t~cQDrnirif~i~sgKq~k~FKgs~~~eG~lIKv~lDPSgi---------Y~atScsdktl~~~Df~sgEc 675 (1080)
T KOG1408|consen 605 DPTSKLVVTVCQDRNIRIFDIESGKQVKSFKGSRDHEGDLIKVILDPSGI---------YLATSCSDKTLCFVDFVSGEC 675 (1080)
T ss_pred CCCcceEEEEecccceEEEeccccceeeeecccccCCCceEEEEECCCcc---------EEEEeecCCceEEEEeccchh
Confidence 99999999999999999999999999998875 556777888888875 899999999999999999999
Q ss_pred EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 423 LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 423 ~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
+..+.||...|+.+.|.+|.+.|++.+.||.|.||.+..
T Consensus 676 vA~m~GHsE~VTG~kF~nDCkHlISvsgDgCIFvW~lp~ 714 (1080)
T KOG1408|consen 676 VAQMTGHSEAVTGVKFLNDCKHLISVSGDGCIFVWKLPL 714 (1080)
T ss_pred hhhhcCcchheeeeeecccchhheeecCCceEEEEECch
Confidence 999999999999999999999999999999999999864
No 116
>KOG0264 consensus Nucleosome remodeling factor, subunit CAF1/NURF55/MSI1 [Chromatin structure and dynamics]
Probab=99.95 E-value=1.8e-26 Score=212.23 Aligned_cols=248 Identities=27% Similarity=0.510 Sum_probs=199.9
Q ss_pred cCCCCeEEEEECCCC-CEEEEEECCCcEEEEECCCc-----------eeEeecCCCCCEEEEEecCCCC-EEEEecCCCe
Q 010759 211 EKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNGD-----------LKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKT 277 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~-~~l~sg~~dg~i~iw~~~~~-----------~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~ 277 (502)
.|.+.|..+.+-|+. ..+++++..+.|.|||.... ...++.+|...-++|+|++... +|++|+.|++
T Consensus 122 ~h~gEVnRaRymPQnp~iVAt~t~~~dv~Vfd~tk~~s~~~~~~~~~Pdl~L~gH~~eg~glsWn~~~~g~Lls~~~d~~ 201 (422)
T KOG0264|consen 122 NHDGEVNRARYMPQNPNIVATKTSSGDVYVFDYTKHPSKPKASGECRPDLRLKGHEKEGYGLSWNRQQEGTLLSGSDDHT 201 (422)
T ss_pred cCCccchhhhhCCCCCcEEEecCCCCCEEEEEeccCCCcccccccCCCceEEEeecccccccccccccceeEeeccCCCc
Confidence 456778888888854 56777888999999996421 1237889999889999998764 6999999999
Q ss_pred EEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEe
Q 010759 278 AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCS 356 (502)
Q Consensus 278 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs 356 (502)
|.+||+...... . ..-.+...|.+|...|..++|+|.. .+|++++
T Consensus 202 i~lwdi~~~~~~-------~---------------------------~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~ 247 (422)
T KOG0264|consen 202 ICLWDINAESKE-------D---------------------------KVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVG 247 (422)
T ss_pred EEEEeccccccC-------C---------------------------ccccceEEeecCCcceehhhccccchhhheeec
Confidence 999998754210 0 0113456788999999999999854 6789999
Q ss_pred CCCcEEEEeCC--CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCE
Q 010759 357 DDVTAKIWNMK--QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPV 433 (502)
Q Consensus 357 ~dg~i~iwd~~--~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v 433 (502)
+|+.+.|||++ +.++.+...+|.+.+.+++|+|.+. .+|||||.|++|++||+++. ++++++.+|...|
T Consensus 248 dd~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~--------~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev 319 (422)
T KOG0264|consen 248 DDGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNE--------FILATGSADKTVALWDLRNLNKPLHTFEGHEDEV 319 (422)
T ss_pred CCCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCC--------ceEEeccCCCcEEEeechhcccCceeccCCCcce
Confidence 99999999999 5666777889999999999999874 58999999999999999975 4678999999999
Q ss_pred EEEEECCCC-CEEEEEeCCCcEEEEeCCCCee--------------EEEEecC-CCEEEEEECCCCC-EEEEEECCCeEE
Q 010759 434 YSLAFSPTG-EYLASGSLDKSMHIWSLKEGKI--------------VKTYTGN-GGIFEVCWNKEGD-KIAACFANHTVC 496 (502)
Q Consensus 434 ~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~--------------~~~~~~~-~~i~~~~ws~~g~-~la~~~~~~~v~ 496 (502)
.+|.|||.. ..||++|.|+++.|||+..-.- +.+-.|+ ..|..++|+|.-- .|++.+.|+.+.
T Consensus 320 ~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~DfsWnp~ePW~I~SvaeDN~Lq 399 (422)
T KOG0264|consen 320 FQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFSWNPNEPWTIASVAEDNILQ 399 (422)
T ss_pred EEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCcccccccccCCCCCCeEEEEecCCceEE
Confidence 999999975 7889999999999999875221 2222333 3589999999876 677888899999
Q ss_pred EEEe
Q 010759 497 VLDF 500 (502)
Q Consensus 497 v~~~ 500 (502)
||..
T Consensus 400 IW~~ 403 (422)
T KOG0264|consen 400 IWQM 403 (422)
T ss_pred Eeec
Confidence 9964
No 117
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.95 E-value=1.4e-25 Score=195.08 Aligned_cols=301 Identities=19% Similarity=0.339 Sum_probs=227.7
Q ss_pred eccccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCC
Q 010759 149 ILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGT 226 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~ 226 (502)
..+.|.++|+++...+. |+|++||+.||.|.+||++..........- ....++ ..+.+.+.|...|.++.|-| |.-
T Consensus 38 ~~r~HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li-~k~~c~-v~~~h~~~Hky~iss~~WyP~DtG 115 (397)
T KOG4283|consen 38 FVRPHGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLI-AKHKCI-VAKQHENGHKYAISSAIWYPIDTG 115 (397)
T ss_pred eeccCCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccce-eheeee-ccccCCccceeeeeeeEEeeecCc
Confidence 34569999999999995 899999999999999999865421110000 000010 12345677889999999998 667
Q ss_pred EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCC---CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 227 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~---~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+|.+++.|.++++||++..+......-.+.|++-+|+|-. -.+++|..|-.|++-|+..|.+..++.+|.+.++++.
T Consensus 116 mFtssSFDhtlKVWDtnTlQ~a~~F~me~~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~ 195 (397)
T KOG4283|consen 116 MFTSSSFDHTLKVWDTNTLQEAVDFKMEGKVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVE 195 (397)
T ss_pred eeecccccceEEEeecccceeeEEeecCceeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEE
Confidence 8899999999999999876665555567889999999843 3567888889999999999999999999999999999
Q ss_pred cCCC--ceEEEEcCCCeEEEEEcCCC-cce--------------eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 304 WRNN--VSFATSSTDNMIYVCKIGEN-RPI--------------KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 304 ~~~~--~~~~~~~~d~~i~~~~~~~~-~~~--------------~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
|.+. ..+++++.|+.+++||++.. .+. +.-..|.+.|+.++|..++.++++++.|..+++|+.
T Consensus 196 Wsp~~e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~ 275 (397)
T KOG4283|consen 196 WSPSSEWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNM 275 (397)
T ss_pred eccCceeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeec
Confidence 9754 45678899999999998743 111 223467889999999999999999999999999998
Q ss_pred CCCcee-eecc--cCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC
Q 010759 367 KQDKYV-HDLR--EHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG 442 (502)
Q Consensus 367 ~~~~~~-~~~~--~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg 442 (502)
.+++.. ..+- .|... ..+++.- .+. .-.++---.++.+.++++-.+..+..+.+|...|.|.+|.|+=
T Consensus 276 ~~G~ntl~~~g~~~~n~~-~~~~~~~~~~~-------s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~f 347 (397)
T KOG4283|consen 276 ESGRNTLREFGPIIHNQT-TSFAVHIQSMD-------SDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDF 347 (397)
T ss_pred ccCccccccccccccccc-ccceEEEeecc-------cceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCch
Confidence 876431 1110 01110 1111110 000 0023333345889999999999999999999999999999998
Q ss_pred CEEEEEeCCCcEEEEeC
Q 010759 443 EYLASGSLDKSMHIWSL 459 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~ 459 (502)
+.+.+|..|+.|..|..
T Consensus 348 q~~~tg~~d~ni~~w~p 364 (397)
T KOG4283|consen 348 EQCFTGDMNGNIYMWSP 364 (397)
T ss_pred hhhhccccCCccccccc
Confidence 89999999999999986
No 118
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.95 E-value=2.3e-24 Score=205.87 Aligned_cols=286 Identities=14% Similarity=0.126 Sum_probs=205.1
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE-EEEECCCcEEEEECCC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNG 244 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l-~sg~~dg~i~iw~~~~ 244 (502)
+.+++|++.|+.|++||+.++.. ...+.. ...+.+++|+|++..+ ++++.++.|++|+...
T Consensus 1 ~~~~~s~~~d~~v~~~d~~t~~~-------------~~~~~~-----~~~~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~ 62 (300)
T TIGR03866 1 EKAYVSNEKDNTISVIDTATLEV-------------TRTFPV-----GQRPRGITLSKDGKLLYVCASDSDTIQVIDLAT 62 (300)
T ss_pred CcEEEEecCCCEEEEEECCCCce-------------EEEEEC-----CCCCCceEECCCCCEEEEEECCCCeEEEEECCC
Confidence 35788999999999999876531 111211 1236679999999876 5677889999999865
Q ss_pred c-eeEeecCCCCCEEEEEecCCCCEEEE-ecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC-ceEEEEcCC-CeEE
Q 010759 245 D-LKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTD-NMIY 320 (502)
Q Consensus 245 ~-~~~~~~~h~~~V~~l~~~~~~~~l~s-gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d-~~i~ 320 (502)
. ....+..+.. +..++|+|+++.+++ ++.|+.+++||+.+...+..+... ..+..+.|.++ ..++++..+ ..++
T Consensus 63 ~~~~~~~~~~~~-~~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~~~ 140 (300)
T TIGR03866 63 GEVIGTLPSGPD-PELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVG-VEPEGMAVSPDGKIVVNTSETTNMAH 140 (300)
T ss_pred CcEEEeccCCCC-ccEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCC-CCcceEEECCCCCEEEEEecCCCeEE
Confidence 3 3444544433 467899999997755 456899999999988766665432 23455666543 345555544 4567
Q ss_pred EEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceeeecccCC-------CcEEEEEEccCCC
Q 010759 321 VCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQDKYVHDLREHS-------KEIYTIRWSPTGS 392 (502)
Q Consensus 321 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg~i~iwd~~~~~~~~~~~~~~-------~~i~~~~~sp~g~ 392 (502)
.|+......+..+.. ...+.+++|+|++++|+ ++..++.|++||+.+++.+..+..+. .....++|+|++.
T Consensus 141 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~ 219 (300)
T TIGR03866 141 FIDTKTYEIVDNVLV-DQRPRFAEFTADGKELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGK 219 (300)
T ss_pred EEeCCCCeEEEEEEc-CCCccEEEECCCCCEEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCC
Confidence 788877665544322 23457899999999875 45569999999999887766553221 1234577888875
Q ss_pred CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEecC
Q 010759 393 GTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 393 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
.++++.+.++.|.+||+.+++.+..+. +...+.+++|+|+|++|+++ +.+|.|++||+.+++.+..+...
T Consensus 220 --------~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~ 290 (300)
T TIGR03866 220 --------TAFVALGPANRVAVVDAKTYEVLDYLL-VGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVG 290 (300)
T ss_pred --------EEEEEcCCCCeEEEEECCCCcEEEEEE-eCCCcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcc
Confidence 334445557789999999888776554 34578999999999999876 46899999999999999988877
Q ss_pred CCEEEEEECC
Q 010759 472 GGIFEVCWNK 481 (502)
Q Consensus 472 ~~i~~~~ws~ 481 (502)
...++++++|
T Consensus 291 ~~~~~~~~~~ 300 (300)
T TIGR03866 291 RLPWGVVVRP 300 (300)
T ss_pred cccceeEeCC
Confidence 7788998876
No 119
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.95 E-value=3.4e-25 Score=193.95 Aligned_cols=282 Identities=22% Similarity=0.374 Sum_probs=203.6
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CCCE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTL 227 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~~~ 227 (502)
-.+|.+-|+++.|.+-|+++||||.|++++|||....... .. +..+...|.+.|..+.|-+ =|+.
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~---------W~----~Ts~Wrah~~Si~rV~WAhPEfGqv 75 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGT---------WS----CTSSWRAHDGSIWRVVWAHPEFGQV 75 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCc---------eE----EeeeEEecCCcEEEEEecCccccce
Confidence 3579999999999999999999999999999997543321 11 1122334678899999965 4899
Q ss_pred EEEEECCCcEEEEECCC----------ceeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 228 LATGSYDGQARIWSTNG----------DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~----------~~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
++++++|+++.||.... ...+++....+.|+.++|.|. |-.|++++.||++|||+.-..--..
T Consensus 76 vA~cS~Drtv~iWEE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs----- 150 (361)
T KOG2445|consen 76 VATCSYDRTVSIWEEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLS----- 150 (361)
T ss_pred EEEEecCCceeeeeecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccc-----
Confidence 99999999999997521 123466677889999999985 5678999999999999864321111
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCc--ceeeecCCCcceeEEEEcCC---CCEEEEEeCC-----CcEEEEe
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPT---GSLLASCSDD-----VTAKIWN 365 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~p~---~~~l~sgs~d-----g~i~iwd 365 (502)
-|.+...- .+.....+..+..|+.|+|. ..+||.|+.+ +.+.||.
T Consensus 151 -------------------------~W~Lq~Ei~~~~~pp~~~~~~~~CvsWn~sr~~~p~iAvgs~e~a~~~~~~~Iye 205 (361)
T KOG2445|consen 151 -------------------------QWTLQHEIQNVIDPPGKNKQPCFCVSWNPSRMHEPLIAVGSDEDAPHLNKVKIYE 205 (361)
T ss_pred -------------------------cchhhhhhhhccCCcccccCcceEEeeccccccCceEEEEcccCCccccceEEEE
Confidence 12221110 01112234556789999874 4678888876 4788887
Q ss_pred CCCC----ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--------------------e
Q 010759 366 MKQD----KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--------------------K 421 (502)
Q Consensus 366 ~~~~----~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--------------------~ 421 (502)
.... ..+.++..|..+|+.|+|+|+-.. ...+||+++.|| |+||.+... +
T Consensus 206 ~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr-----~y~~lAvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~ 279 (361)
T KOG2445|consen 206 YNENGRKWLKVAELPDHTDPIRDISWAPNIGR-----SYHLLAVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVE 279 (361)
T ss_pred ecCCcceeeeehhcCCCCCcceeeeeccccCC-----ceeeEEEeecCc-EEEEEEeeccchhhhhcccCCCCccccceE
Confidence 5433 235677789999999999997532 235899999999 999998631 2
Q ss_pred EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC---CeeEEEEecCCCEEEEEEC
Q 010759 422 LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE---GKIVKTYTGNGGIFEVCWN 480 (502)
Q Consensus 422 ~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~---~~~~~~~~~~~~i~~~~ws 480 (502)
.+..+.+|.+.|+.+.|+-.|..|++.|.||.|++|...- .+.+-.+..++.+....|+
T Consensus 280 ~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWkany~n~~kC~sv~~~e~~~~~~~~~ 341 (361)
T KOG2445|consen 280 KVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWKANYNNLWKCTSVLKAEGSVTKPDFS 341 (361)
T ss_pred EeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehhhhhhhhheeeeEEeccCCCCCcccc
Confidence 3455788999999999999999999999999999998542 3344444444444444443
No 120
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.95 E-value=1.1e-26 Score=225.74 Aligned_cols=287 Identities=23% Similarity=0.384 Sum_probs=222.1
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCEEEEEECCC
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSYDG 235 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l~sg~~dg 235 (502)
.++|+..++-..|+.+| -..++||.+....... +.++ + .+...........+.|+. +.++|++++..|
T Consensus 42 ~nAIs~nr~~~qiv~AG-rs~lklyai~~~~~~~-----~~~~---~--~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG 110 (839)
T KOG0269|consen 42 ANAISVNRDINQIVVAG-RSLLKLYAINPNDFSE-----KCNH---R--FKTKQNKFYSAADVKWGQLYSNLIATCSTNG 110 (839)
T ss_pred cceEeecCCcceeEEec-ccceeeEeeCcccCCc-----ceee---e--cccccceeeehhhcccccchhhhheeecCCC
Confidence 56777788877777775 3578888775432211 0111 1 011111233456678875 568999999999
Q ss_pred cEEEEECCC----ceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC--CCc
Q 010759 236 QARIWSTNG----DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNV 308 (502)
Q Consensus 236 ~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~ 308 (502)
.|.+||++. .+...|..|+..|.++.|++.. ++|+|||.||+|++||++...-+.++......+.++.|. ...
T Consensus 111 ~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~ 190 (839)
T KOG0269|consen 111 VISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGN 190 (839)
T ss_pred cEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCCc
Confidence 999999875 3445788999999999999865 678999999999999999999888888888888888885 567
Q ss_pred eEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--eeecccCCCcEEEE
Q 010759 309 SFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLREHSKEIYTI 385 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~~~~~i~~~ 385 (502)
.|++..+.|.+..||++.. ++...+..|.++|.|+.|+|++.+|||||.|++|+|||+.+.+. .+++ ....++.++
T Consensus 191 ~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tI-nTiapv~rV 269 (839)
T KOG0269|consen 191 KFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTI-NTIAPVGRV 269 (839)
T ss_pred eEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEE-eecceeeee
Confidence 8999999999999999864 56778899999999999999999999999999999999986543 2222 234678999
Q ss_pred EEccCCCCCCCCCCcEEEEEEe--CCCeEEEEeCCCCe-EEEEeeCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEeCCC
Q 010759 386 RWSPTGSGTNNPNQQLILASAS--FDSTVKLWDVELGK-LLYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~ 461 (502)
+|-|... +.||+++ .|-.|+|||++..- +..++..|+..++.++|.. |...|.++|.||+|..-.+++
T Consensus 270 kWRP~~~--------~hLAtcsmv~dtsV~VWDvrRPYIP~~t~~eH~~~vt~i~W~~~d~~~l~s~sKD~tv~qh~~kn 341 (839)
T KOG0269|consen 270 KWRPARS--------YHLATCSMVVDTSVHVWDVRRPYIPYATFLEHTDSVTGIAWDSGDRINLWSCSKDGTVLQHLFKN 341 (839)
T ss_pred eeccCcc--------chhhhhhccccceEEEEeeccccccceeeeccCccccceeccCCCceeeEeecCccHHHHhhhhc
Confidence 9998764 4677766 47789999998554 3457888999999999965 446788999999988776665
Q ss_pred Ce
Q 010759 462 GK 463 (502)
Q Consensus 462 ~~ 463 (502)
+.
T Consensus 342 at 343 (839)
T KOG0269|consen 342 AT 343 (839)
T ss_pred cc
Confidence 54
No 121
>KOG2096 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=3.1e-25 Score=194.91 Aligned_cols=275 Identities=19% Similarity=0.281 Sum_probs=201.0
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCcee-----EeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEecc
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-----CTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVK 284 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-----~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~ 284 (502)
+|.+.|++++|++||++|++++.|+.|+||++..-.. ....-.-+--+.+.|.|+..-+ +++-...++++|-+.
T Consensus 84 gH~~~vt~~~FsSdGK~lat~~~Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~~ 163 (420)
T KOG2096|consen 84 GHKKEVTDVAFSSDGKKLATISGDRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKLV 163 (420)
T ss_pred ccCCceeeeEEcCCCceeEEEeCCceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEee
Confidence 4688999999999999999999999999999753111 0111111234788999998754 556666789999764
Q ss_pred Cc---ceeE---------EeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE
Q 010759 285 TE---EWKQ---------QFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 285 ~~---~~~~---------~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 351 (502)
.. .... .-..|+.++..+...++ ..+++++.|..|.+|+++ ++.+..+......-...+.||+|++
T Consensus 164 K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtnq~~n~~aavSP~GRF 242 (420)
T KOG2096|consen 164 KKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTNQSSNYDAAVSPDGRF 242 (420)
T ss_pred ecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-CceeeeeccccccccceeeCCCCcE
Confidence 22 1111 11234455666655444 456788999999999998 6666666555555566889999999
Q ss_pred EEEEeCCCcEEEEeCC---CC-----ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---
Q 010759 352 LASCSDDVTAKIWNMK---QD-----KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--- 420 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~---~~-----~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--- 420 (502)
+++++.---+++|..- .+ ..+..+++|...|..++|+++.. .++|.|.||++||||+...
T Consensus 243 ia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~---------r~vtvSkDG~wriwdtdVrY~~ 313 (420)
T KOG2096|consen 243 IAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSST---------RAVTVSKDGKWRIWDTDVRYEA 313 (420)
T ss_pred EEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcc---------eeEEEecCCcEEEeeccceEec
Confidence 9999999999999752 22 34567889999999999999875 6899999999999997532
Q ss_pred -eEEEEee-------C-CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEE
Q 010759 421 -KLLYSLN-------G-HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 421 -~~~~~~~-------~-h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~ 489 (502)
+..+.++ . ...++ .|+.+|+|+.||.+. ...|++|..++|+....+. +.+.|.+++|+++|+++|+|
T Consensus 314 ~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h~~~Is~is~~~~g~~~atc 391 (420)
T KOG2096|consen 314 GQDPKILKEGSAPLHAAGSEPV-RLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIHSTTISSISYSSDGKYIATC 391 (420)
T ss_pred CCCchHhhcCCcchhhcCCCce-EEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhhcCceeeEEecCCCcEEeee
Confidence 1111111 1 12344 899999999988654 4579999999998877765 35679999999999999999
Q ss_pred ECCCeEEEE
Q 010759 490 FANHTVCVL 498 (502)
Q Consensus 490 ~~~~~v~v~ 498 (502)
+. +.+.|+
T Consensus 392 Gd-r~vrv~ 399 (420)
T KOG2096|consen 392 GD-RYVRVI 399 (420)
T ss_pred cc-eeeeee
Confidence 85 456665
No 122
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.95 E-value=6.4e-25 Score=217.57 Aligned_cols=271 Identities=23% Similarity=0.381 Sum_probs=219.0
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc--eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
|...-+.++|.|+|.++++++.||.|++|+.... ...++..+...|++++.. +++|++|+.+++|.+|....++..
T Consensus 12 ht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~--s~~f~~~s~~~tv~~y~fps~~~~ 89 (933)
T KOG1274|consen 12 HTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACY--SNHFLTGSEQNTVLRYKFPSGEED 89 (933)
T ss_pred ccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeec--ccceEEeeccceEEEeeCCCCCcc
Confidence 4556889999999999999999999999986543 233444478888888754 459999999999999999888765
Q ss_pred EEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 290 QQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
..+..-.-++.++.+.. ...++.+++|-.|.+.+.......+.+++|.++|.++.|+|.+++||+.+-||.|+||++..
T Consensus 90 ~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 90 TILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred ceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEccc
Confidence 55555555677777754 45677889999999999999989999999999999999999999999999999999999998
Q ss_pred CceeeecccC--------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEE
Q 010759 369 DKYVHDLREH--------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAF 438 (502)
Q Consensus 369 ~~~~~~~~~~--------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~ 438 (502)
+.+..++..- ...+..++|+|++. -++..+.|+.|++|+...+...+.+.. +...+.+++|
T Consensus 170 ~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g---------~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~w 240 (933)
T KOG1274|consen 170 GILSKTLTGVDKDNEFILSRICTRLAWHPKGG---------TLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQW 240 (933)
T ss_pred chhhhhcccCCccccccccceeeeeeecCCCC---------eEEeeccCCeEEEEccCCceeheeecccccccceEEEEE
Confidence 8776655431 34567889999965 356677899999999999998887753 4455999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
||+|+|||+++.||.|.|||+.+... -.....|.+++|.|+.+.+-.-...|+..
T Consensus 241 sPnG~YiAAs~~~g~I~vWnv~t~~~---~~~~~~Vc~~aw~p~~n~it~~~~~g~~~ 295 (933)
T KOG1274|consen 241 SPNGKYIAASTLDGQILVWNVDTHER---HEFKRAVCCEAWKPNANAITLITALGTLG 295 (933)
T ss_pred cCCCcEEeeeccCCcEEEEecccchh---ccccceeEEEecCCCCCeeEEEeeccccc
Confidence 99999999999999999999987222 22245689999999998776555555443
No 123
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=2.6e-25 Score=204.44 Aligned_cols=282 Identities=14% Similarity=0.228 Sum_probs=224.7
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC-EEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-LLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~-~l~sg~ 232 (502)
.++|+++.|+|.-.+|++||.|++++||.+.... +.. +... .-...+|.+.+|.|+|. .+++++
T Consensus 213 ~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~-N~~-----lqS~---------~l~~fPi~~a~f~p~G~~~i~~s~ 277 (514)
T KOG2055|consen 213 HGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKV-NPK-----LQSI---------HLEKFPIQKAEFAPNGHSVIFTSG 277 (514)
T ss_pred cCCceEEEecCCCceEEEecCCCcEEEEEecCcc-Chh-----heee---------eeccCccceeeecCCCceEEEecc
Confidence 4689999999999999999999999999986432 111 1111 11246899999999999 899999
Q ss_pred CCCcEEEEECCCceeE---eecCCC-CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 233 YDGQARIWSTNGDLKC---TLSKHK-GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~---~~~~h~-~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
.....+.||+...... ...++. ..+.....+|++++|+..+..|.|.+....+++++..+..
T Consensus 278 rrky~ysyDle~ak~~k~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLhakT~eli~s~Ki-------------- 343 (514)
T KOG2055|consen 278 RRKYLYSYDLETAKVTKLKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLHAKTKELITSFKI-------------- 343 (514)
T ss_pred cceEEEEeeccccccccccCCCCcccchhheeEecCCCCeEEEcccCceEEeehhhhhhhhheeee--------------
Confidence 9999999998754332 233443 3456677799999999999999999998888876654421
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC-cEEEEEE
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK-EIYTIRW 387 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~-~i~~~~~ 387 (502)
.+.|..++|+.+++.|++++.+|.|.+||++...+++.+....+ .-++++.
T Consensus 344 ----------------------------eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~ 395 (514)
T KOG2055|consen 344 ----------------------------EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCI 395 (514)
T ss_pred ----------------------------ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceEEEEeecCccceeeeee
Confidence 35678899999999999999999999999999999888765332 2356677
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC------CeEEEEeeCCCCCEEEEEECCCCCEEEEEeC--CCcEEEEeC
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVEL------GKLLYSLNGHREPVYSLAFSPTGEYLASGSL--DKSMHIWSL 459 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~------~~~~~~~~~h~~~v~~l~~spdg~~lasgs~--Dg~i~iw~~ 459 (502)
++++. +||+||..|.|.|||..+ .+++..+......|++|+|+||++.||.+|. ...+++-.+
T Consensus 396 S~ng~---------ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHv 466 (514)
T KOG2055|consen 396 SLNGS---------YLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRVKKNALRLVHV 466 (514)
T ss_pred cCCCc---------eEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhccccceEEEec
Confidence 78776 899999999999999653 4567777777788999999999999988774 678999888
Q ss_pred CCCeeEEEEec----CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 460 KEGKIVKTYTG----NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 460 ~~~~~~~~~~~----~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..-.+...|+. -+-+.+++|||.|-+||.|-..|.|.+|-+.
T Consensus 467 PS~TVFsNfP~~n~~vg~vtc~aFSP~sG~lAvGNe~grv~l~kL~ 512 (514)
T KOG2055|consen 467 PSCTVFSNFPTSNTKVGHVTCMAFSPNSGYLAVGNEAGRVHLFKLH 512 (514)
T ss_pred cceeeeccCCCCCCcccceEEEEecCCCceEEeecCCCceeeEeec
Confidence 87666655643 2458999999999999999999999999763
No 124
>KOG0283 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.94 E-value=7.2e-26 Score=223.16 Aligned_cols=242 Identities=20% Similarity=0.347 Sum_probs=179.2
Q ss_pred eec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe----------EEEecCC------CceEE
Q 010759 249 TLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT----------LDVDWRN------NVSFA 311 (502)
Q Consensus 249 ~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~----------~~~~~~~------~~~~~ 311 (502)
.+. .|.++|++++|+++|+||++|+.|+.|+||.+...+....-.....++ ..+.... ....-
T Consensus 261 e~~~ah~gaIw~mKFS~DGKyLAsaGeD~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~ 340 (712)
T KOG0283|consen 261 EISNAHKGAIWAMKFSHDGKYLASAGEDGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSR 340 (712)
T ss_pred ccccccCCcEEEEEeCCCCceeeecCCCceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccc
Confidence 345 899999999999999999999999999999886533211000000000 0000000 00000
Q ss_pred EEcCCCeEEEEE---cCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCK---IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~---~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
.+.....+.+-. .-..+|+..|.||.+.|..+.||.+ ++|+++|.|.+||+|++....++..|. |..-|+||+|.
T Consensus 341 ~~~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn-~fLLSSSMDKTVRLWh~~~~~CL~~F~-HndfVTcVaFn 418 (712)
T KOG0283|consen 341 KGSQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKN-NFLLSSSMDKTVRLWHPGRKECLKVFS-HNDFVTCVAFN 418 (712)
T ss_pred cccCCccccCCCccccccccchhhhhccchhheecccccC-CeeEeccccccEEeecCCCcceeeEEe-cCCeeEEEEec
Confidence 011111111100 0134688899999999999999965 578899999999999999999998875 89999999999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 389 PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
|... .|+++||-||.||||++...+.+.-.. ...-|++++|+|||++.+.|+.+|.+++|++..-++...+
T Consensus 419 PvDD--------ryFiSGSLD~KvRiWsI~d~~Vv~W~D-l~~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~ 489 (712)
T KOG0283|consen 419 PVDD--------RYFISGSLDGKVRLWSISDKKVVDWND-LRDLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDF 489 (712)
T ss_pred ccCC--------CcEeecccccceEEeecCcCeeEeehh-hhhhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEee
Confidence 9654 489999999999999998777765444 3478999999999999999999999999999988776554
Q ss_pred ec---------CCCEEEEEECCCC-CEEEEEECCCeEEEEEee
Q 010759 469 TG---------NGGIFEVCWNKEG-DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 469 ~~---------~~~i~~~~ws~~g-~~la~~~~~~~v~v~~~~ 501 (502)
.- +..|++++|.|.. +.+.+.+.|..|+|||.|
T Consensus 490 ~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLVTSnDSrIRI~d~~ 532 (712)
T KOG0283|consen 490 HIRLHNKKKKQGKRITGLQFFPGDPDEVLVTSNDSRIRIYDGR 532 (712)
T ss_pred eEeeccCccccCceeeeeEecCCCCCeEEEecCCCceEEEecc
Confidence 21 2369999999854 578888899999999984
No 125
>TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein. Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol.
Probab=99.94 E-value=7.8e-24 Score=202.27 Aligned_cols=264 Identities=14% Similarity=0.179 Sum_probs=198.6
Q ss_pred CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 226 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
.++++++.|+.+++|+... .....+..+.. +.+++|+|++..+ ++++.++.|++||+.+++....+..+..+ ..+.
T Consensus 2 ~~~~s~~~d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~-~~~~ 79 (300)
T TIGR03866 2 KAYVSNEKDNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGTLPSGPDP-ELFA 79 (300)
T ss_pred cEEEEecCCCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEeccCCCCc-cEEE
Confidence 5788999999999999854 45556665544 6789999999876 56788999999999998877666544333 3455
Q ss_pred cCCC--ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC-cEEEEeCCCCceeeecccCCC
Q 010759 304 WRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKYVHDLREHSK 380 (502)
Q Consensus 304 ~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~~~~ 380 (502)
+.++ ..+++++.++.+++|++.....+..+.. ...+.+++|+|+|.++++++.++ .+.+||..++..+..+.. ..
T Consensus 80 ~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~-~~~~~~~~~~~dg~~l~~~~~~~~~~~~~d~~~~~~~~~~~~-~~ 157 (300)
T TIGR03866 80 LHPNGKILYIANEDDNLVTVIDIETRKVLAEIPV-GVEPEGMAVSPDGKIVVNTSETTNMAHFIDTKTYEIVDNVLV-DQ 157 (300)
T ss_pred ECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeC-CCCcceEEECCCCCEEEEEecCCCeEEEEeCCCCeEEEEEEc-CC
Confidence 5433 3345566789999999988777666653 23467899999999999988875 467789888776554432 23
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----C--CEEEEEECCCCCEEEE-EeCCC
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----E--PVYSLAFSPTGEYLAS-GSLDK 452 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~--~v~~l~~spdg~~las-gs~Dg 452 (502)
....+.|+|++. .+++++..++.|++||+.+++.+..+..+. . ....++|+|++++++. .+.++
T Consensus 158 ~~~~~~~s~dg~--------~l~~~~~~~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~ 229 (300)
T TIGR03866 158 RPRFAEFTADGK--------ELWVSSEIGGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPAN 229 (300)
T ss_pred CccEEEECCCCC--------EEEEEcCCCCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCC
Confidence 456788999875 344566679999999999988776654321 1 2356899999998654 45567
Q ss_pred cEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEE-ECCCeEEEEEee
Q 010759 453 SMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAAC-FANHTVCVLDFR 501 (502)
Q Consensus 453 ~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~-~~~~~v~v~~~~ 501 (502)
.|.+||+.+++++..+.....+.+++|+|+|++|+++ ..++.|.|||++
T Consensus 230 ~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~ 279 (300)
T TIGR03866 230 RVAVVDAKTYEVLDYLLVGQRVWQLAFTPDEKYLLTTNGVSNDVSVIDVA 279 (300)
T ss_pred eEEEEECCCCcEEEEEEeCCCcceEEECCCCCEEEEEcCCCCeEEEEECC
Confidence 8999999999887766555678999999999999876 458999999986
No 126
>KOG0647 consensus mRNA export protein (contains WD40 repeats) [RNA processing and modification]
Probab=99.94 E-value=6.5e-25 Score=191.73 Aligned_cols=237 Identities=20% Similarity=0.373 Sum_probs=185.1
Q ss_pred cCCCCeEEEEECC-CCCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc
Q 010759 211 EKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 286 (502)
Q Consensus 211 ~~~~~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~ 286 (502)
+....|.+|+||| ...+++.|+.||+||+|+++.. .......|.++|.+++|+.+|..+++|+.|+.+++||+.++
T Consensus 25 pP~DsIS~l~FSP~~~~~~~A~SWD~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 25 PPEDSISALAFSPQADNLLAAGSWDGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred CcccchheeEeccccCceEEecccCCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 3457799999999 5667778999999999998642 12345679999999999999999999999999999999887
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC--EEEEEeCCCcEEEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS--LLASCSDDVTAKIW 364 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~--~l~sgs~dg~i~iw 364 (502)
+. ..+..|.++|.++.|-+... .|+|||.|.+|++|
T Consensus 105 Q~------------------------------------------~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfW 142 (347)
T KOG0647|consen 105 QV------------------------------------------SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFW 142 (347)
T ss_pred Ce------------------------------------------eeeeecccceeEEEEecCCCcceeEecccccceeec
Confidence 53 23445788888888876655 89999999999999
Q ss_pred eCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe--eCCCCCEEEEEECCCC
Q 010759 365 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL--NGHREPVYSLAFSPTG 442 (502)
Q Consensus 365 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~~h~~~v~~l~~spdg 442 (502)
|++...++.++.. ...+++...-. .+++.+..+..|.+|+++++...+.. ....--+.||+..+|.
T Consensus 143 D~R~~~pv~t~~L-PeRvYa~Dv~~-----------pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~ 210 (347)
T KOG0647|consen 143 DTRSSNPVATLQL-PERVYAADVLY-----------PMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDK 210 (347)
T ss_pred ccCCCCeeeeeec-cceeeehhccC-----------ceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecC
Confidence 9999888877654 34566654321 25677888999999999876543221 1123358899999998
Q ss_pred CEEEEEeCCCcEEEEeCCCC--eeEEEEecC----------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 443 EYLASGSLDKSMHIWSLKEG--KIVKTYTGN----------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~~~~--~~~~~~~~~----------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
...|.||-.|++-|..+..+ +.-.+|..| ..|++++|+|.-..||+++.||++.+||-.
T Consensus 211 ~~~alGsiEGrv~iq~id~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkd 281 (347)
T KOG0647|consen 211 DGFALGSIEGRVAIQYIDDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKD 281 (347)
T ss_pred CceEeeeecceEEEEecCCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecch
Confidence 88899999999999999876 333334322 136789999999999999999999999853
No 127
>KOG1274 consensus WD40 repeat protein [General function prediction only]
Probab=99.94 E-value=1.1e-24 Score=215.97 Aligned_cols=241 Identities=22% Similarity=0.367 Sum_probs=205.9
Q ss_pred cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc-ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc
Q 010759 251 SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP 329 (502)
Q Consensus 251 ~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~ 329 (502)
..|+..-+.|+|.|+|.+|++|+.||.|++|+...- +....+..+...+.++....+ .|++++.+++|.++....+..
T Consensus 10 yaht~G~t~i~~d~~gefi~tcgsdg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~-~f~~~s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 10 YAHTGGLTLICYDPDGEFICTCGSDGDIRKWKTNSDEEEPETIDISGELVSSIACYSN-HFLTGSEQNTVLRYKFPSGEE 88 (933)
T ss_pred hhccCceEEEEEcCCCCEEEEecCCCceEEeecCCcccCCchhhccCceeEEEeeccc-ceEEeeccceEEEeeCCCCCc
Confidence 368888899999999999999999999999986554 333333335556666655444 899999999999999988776
Q ss_pred eeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 330 IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 330 ~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
-..+...+-++.+++|+-+|+++|.||.|-.|++-++........+++|..+|.++.|+|.+. +||+.+.|
T Consensus 89 ~~iL~Rftlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~---------fLAvss~d 159 (933)
T KOG1274|consen 89 DTILARFTLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGN---------FLAVSSCD 159 (933)
T ss_pred cceeeeeeccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCCC---------EEEEEecC
Confidence 555555677899999999999999999999999999999988999999999999999999986 89999999
Q ss_pred CeEEEEeCCCCeEEEEeeCC--------CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC---CCEEEEE
Q 010759 410 STVKLWDVELGKLLYSLNGH--------REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN---GGIFEVC 478 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h--------~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~---~~i~~~~ 478 (502)
|.|+|||+.++.+..++.+- ...++.++|+|+|..|+..+.|+.|++|+..++.+...+..+ ..+..++
T Consensus 160 G~v~iw~~~~~~~~~tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~ 239 (933)
T KOG1274|consen 160 GKVQIWDLQDGILSKTLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQ 239 (933)
T ss_pred ceEEEEEcccchhhhhcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEE
Confidence 99999999998887766542 345788999999888888889999999999999888777652 3488999
Q ss_pred ECCCCCEEEEEECCCeEEEEEee
Q 010759 479 WNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 479 ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+|.|+|||+++.||.|.|||+.
T Consensus 240 wsPnG~YiAAs~~~g~I~vWnv~ 262 (933)
T KOG1274|consen 240 WSPNGKYIAASTLDGQILVWNVD 262 (933)
T ss_pred EcCCCcEEeeeccCCcEEEEecc
Confidence 99999999999999999999985
No 128
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=8.6e-27 Score=224.87 Aligned_cols=256 Identities=26% Similarity=0.425 Sum_probs=222.5
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC
Q 010759 165 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 244 (502)
Q Consensus 165 d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~ 244 (502)
-+.++.++..+..+++|+.... ..|+..|.++..-..++.+++|+.|..+-+|....
T Consensus 3 ~~~~~m~~~~~t~Lr~~~~~~~-----------------------~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~k 59 (825)
T KOG0267|consen 3 GMEFLMKTKRATKLRVWDTREF-----------------------VAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGK 59 (825)
T ss_pred cccccceeeeeeccccccchhh-----------------------hhhhhhhceeeeeccceeeccCCCceeeccccccC
Confidence 3445556666677888875421 23456677777766788999999999999998754
Q ss_pred -ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc-eEEEEcCCCeEEEE
Q 010759 245 -DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDNMIYVC 322 (502)
Q Consensus 245 -~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~i~~~ 322 (502)
.....+.+|..+|-+|.|++....|++|+.+|+|++||+.+...++++.+|...+..++|.+-. .++.++.|.-+.+|
T Consensus 60 p~~i~S~~~hespIeSl~f~~~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iw 139 (825)
T KOG0267|consen 60 PNAITSLTGHESPIESLTFDTSERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIW 139 (825)
T ss_pred CchhheeeccCCcceeeecCcchhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceeh
Confidence 3344689999999999999999999999999999999999999999999999999999997655 44678999999999
Q ss_pred EcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 323 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 323 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
|.+...+...|.+|...|.++.|+|+|+++++|++|.+++|||...+++..+|..|...+..+.|+|... +
T Consensus 140 D~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~---------L 210 (825)
T KOG0267|consen 140 DIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEV---------L 210 (825)
T ss_pred hhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhh---------h
Confidence 9998899999999999999999999999999999999999999999999999999999999999988764 7
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 403 LASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
+++||.|++|++||+++...+-........|.+++|+|++..+++|-...
T Consensus 211 la~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~s 260 (825)
T KOG0267|consen 211 LAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQIS 260 (825)
T ss_pred hccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchhh
Confidence 89999999999999999888888887788999999999999888876654
No 129
>KOG0267 consensus Microtubule severing protein katanin p80 subunit B (contains WD40 repeats) [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94 E-value=1.4e-26 Score=223.33 Aligned_cols=252 Identities=26% Similarity=0.473 Sum_probs=222.7
Q ss_pred EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 227 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+++.+...-.+++|+.. .+..|...|.++.....+..+++|+.|..+-+|.+.....+..|.+|..++-++.|..
T Consensus 6 ~~m~~~~~t~Lr~~~~~-----~~~~hsaav~~lk~~~s~r~~~~Gg~~~k~~L~~i~kp~~i~S~~~hespIeSl~f~~ 80 (825)
T KOG0267|consen 6 FLMKTKRATKLRVWDTR-----EFVAHSAAVGCLKIRKSSRSLVTGGEDEKVNLWAIGKPNAITSLTGHESPIESLTFDT 80 (825)
T ss_pred ccceeeeeeccccccch-----hhhhhhhhhceeeeeccceeeccCCCceeeccccccCCchhheeeccCCcceeeecCc
Confidence 44445555567788764 3456888899998877888999999999999999877666667899999999999975
Q ss_pred C-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 307 N-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 307 ~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
. ..+++++.+|+|++||+...+.++++.||...+.+|+|+|-+.++|+|+.|..+++||.+...+.+.+.+|...+..+
T Consensus 81 ~E~LlaagsasgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc~~~~~s~~~vv~~l 160 (825)
T KOG0267|consen 81 SERLLAAGSASGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGCSHTYKSHTRVVDVL 160 (825)
T ss_pred chhhhcccccCCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCceeeecCCcceeEEE
Confidence 4 556778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 465 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 465 (502)
+|+|+|. ++++|+.|.+++|||...|+.+.+|.+|...|.++.|+|..-++++||.|++|++||+++..++
T Consensus 161 ~lsP~Gr---------~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I 231 (825)
T KOG0267|consen 161 RLSPDGR---------WVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVI 231 (825)
T ss_pred eecCCCc---------eeeccCCcceeeeecccccccccccccccccccccccCchhhhhccCCCCceeeeeccceeEEe
Confidence 9999997 8999999999999999999999999999999999999999999999999999999999988877
Q ss_pred EEEec-CCCEEEEEECCCCCEEEEEECC
Q 010759 466 KTYTG-NGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 466 ~~~~~-~~~i~~~~ws~~g~~la~~~~~ 492 (502)
..... -.+|.+++|+|+|+.++.|...
T Consensus 232 ~s~~~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 232 SSGKPETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred eccCCccCCceeeeecCCceeeecCchh
Confidence 66544 3568999999999988877543
No 130
>KOG1539 consensus WD repeat protein [General function prediction only]
Probab=99.94 E-value=2e-23 Score=204.78 Aligned_cols=325 Identities=18% Similarity=0.311 Sum_probs=243.0
Q ss_pred eccccccceeEEEECCC--CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 149 ILEGHTSEVCACAWSPA--GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd--~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.++.-.+.|+++ +||. -+.++.|+.+|.++||++.+++.. ..+. +....|+++.=+|--.
T Consensus 154 ~~~~~~~~Ital-~HP~TYLNKIvvGs~~G~lql~Nvrt~K~v-------------~~f~----~~~s~IT~ieqsPaLD 215 (910)
T KOG1539|consen 154 FLKVEGDFITAL-LHPSTYLNKIVVGSSQGRLQLWNVRTGKVV-------------YTFQ----EFFSRITAIEQSPALD 215 (910)
T ss_pred eeeccCCceeeE-ecchhheeeEEEeecCCcEEEEEeccCcEE-------------EEec----ccccceeEeccCCcce
Confidence 333333348887 4665 367889999999999999887532 2222 2246799999899888
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCE-EEEecCCCeEEEEeccCcceeEEee-ecccCeEEEe
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEEWKQQFE-FHSGPTLDVD 303 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~~~-~~~~~~~~~~ 303 (502)
.++.|..+|+|.|+++.. +...+|..-.+.|+++.|..||+. +++|+..|.+.+||+...+.+.... .|.+.+....
T Consensus 216 VVaiG~~~G~ViifNlK~dkil~sFk~d~g~VtslSFrtDG~p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~ 295 (910)
T KOG1539|consen 216 VVAIGLENGTVIIFNLKFDKILMSFKQDWGRVTSLSFRTDGNPLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGAT 295 (910)
T ss_pred EEEEeccCceEEEEEcccCcEEEEEEccccceeEEEeccCCCeeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccce
Confidence 999999999999999874 455566544599999999999976 5667777999999999888777665 6767777777
Q ss_pred cCCC-ceEEEEcCCCeEEEEEcCC--C--cceeeecCCCcceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCce------
Q 010759 304 WRNN-VSFATSSTDNMIYVCKIGE--N--RPIKTFAGHQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDKY------ 371 (502)
Q Consensus 304 ~~~~-~~~~~~~~d~~i~~~~~~~--~--~~~~~~~~h~~~v~~v~~~-p~~~~l~sgs~dg~i~iwd~~~~~~------ 371 (502)
+.+. -.+++++.|+.+++|-.++ + +.++.-.||..+..|+.|. .+|.++.+++.|++++.+++.....
T Consensus 296 fl~~epVl~ta~~DnSlk~~vfD~~dg~pR~LR~R~GHs~Pp~~irfy~~~g~~ilsa~~Drt~r~fs~~~e~~~~~l~~ 375 (910)
T KOG1539|consen 296 FLPGEPVLVTAGADNSLKVWVFDSGDGVPRLLRSRGGHSAPPSCIRFYGSQGHFILSAKQDRTLRSFSVISESQSQELGQ 375 (910)
T ss_pred ecCCCceEeeccCCCceeEEEeeCCCCcchheeeccCCCCCchheeeeccCcEEEEecccCcchhhhhhhHHHHhHhhcc
Confidence 6544 4567888899888776553 3 3344556899999999998 6788999999999888886532100
Q ss_pred ----------------------eeec--------------ccC-----------------------------CCcEEEEE
Q 010759 372 ----------------------VHDL--------------REH-----------------------------SKEIYTIR 386 (502)
Q Consensus 372 ----------------------~~~~--------------~~~-----------------------------~~~i~~~~ 386 (502)
+..| ..| ...+++++
T Consensus 376 ~~~~~~~kk~~~~~~~~~k~p~i~~fa~~~~RE~~W~Nv~~~h~~~~~~~tW~~~n~~~G~~~L~~~~~~~~~~~~~av~ 455 (910)
T KOG1539|consen 376 LHNKKRAKKVNVFSTEKLKLPPIVEFAFENAREKEWDNVITAHKGKRSAYTWNFRNKTSGRHVLDPKRFKKDDINATAVC 455 (910)
T ss_pred cccccccccccccchhhhcCCcceeeecccchhhhhcceeEEecCcceEEEEeccCcccccEEecCccccccCcceEEEE
Confidence 0000 001 01233333
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe---eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL---NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
.++.|. +.+.|+..|+|-+|++.+|-...++ ..|..+|+.|+...-++.+++++.+|.+++|+..+..
T Consensus 456 vs~CGN---------F~~IG~S~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~ 526 (910)
T KOG1539|consen 456 VSFCGN---------FVFIGYSKGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKV 526 (910)
T ss_pred EeccCc---------eEEEeccCCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcc
Confidence 333332 5667888999999999999988888 5899999999999889999999999999999988765
Q ss_pred eEEEE-----------------------------------------ecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 464 IVKTY-----------------------------------------TGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 464 ~~~~~-----------------------------------------~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++..+ .++ ..|++++|||||++|++++.|++|++||+
T Consensus 527 l~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~nritd~~FS~DgrWlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 527 LKKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHGNRITDMTFSPDGRWLISASMDSTIRTWDL 605 (910)
T ss_pred eeeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccccceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence 32221 112 24789999999999999999999999997
No 131
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.1e-24 Score=200.81 Aligned_cols=229 Identities=21% Similarity=0.370 Sum_probs=192.4
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
.++|.+++-+|.|.+|+.|+..|.+++|.+. |.+...+.+|-.+|+++.|+.+|.+|+|||.||.|.+|.+..
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~------ 154 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTD------ 154 (476)
T ss_pred ccceeeeecCCCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEe------
Confidence 5679999999999999999999999999986 456667789999999999999999999999999999998632
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCC
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~ 369 (502)
++....+. ..+|+..|..|+-+|+.+...+- ...|+|+|.|.++++||+..+
T Consensus 155 ------------------lv~a~~~~--------~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g 208 (476)
T KOG0646|consen 155 ------------------LVSADNDH--------SVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSLG 208 (476)
T ss_pred ------------------ecccccCC--------CccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEeccc
Confidence 11122221 35678889999999999888754 467999999999999999999
Q ss_pred ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC----------------eEEEEeeCCCC--
Q 010759 370 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----------------KLLYSLNGHRE-- 431 (502)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----------------~~~~~~~~h~~-- 431 (502)
..+.++. ....+.+++.+|... .+..|+.+|.|.+.++... ..+..+.||.+
T Consensus 209 ~LLlti~-fp~si~av~lDpae~---------~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~ 278 (476)
T KOG0646|consen 209 VLLLTIT-FPSSIKAVALDPAER---------VVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENES 278 (476)
T ss_pred eeeEEEe-cCCcceeEEEccccc---------EEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCc
Confidence 8887765 356789999999875 6788999999999876432 23456789988
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCC
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEG 483 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g 483 (502)
+|+|++.+-||..|++|+.||.|.|||+...++++++. -.+.|+.+.++|=-
T Consensus 279 ~ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~~ 331 (476)
T KOG0646|consen 279 AITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPLE 331 (476)
T ss_pred ceeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeeccc
Confidence 99999999999999999999999999999999888887 57788888887743
No 132
>KOG0269 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.93 E-value=4.3e-25 Score=214.84 Aligned_cols=237 Identities=24% Similarity=0.419 Sum_probs=188.0
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe----eecc---cCeEEEecC--CCceEEEEcCCCeEEEEEcCC-
Q 010759 257 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF----EFHS---GPTLDVDWR--NNVSFATSSTDNMIYVCKIGE- 326 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~----~~~~---~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~- 326 (502)
...|..+++-+.++.++. ..+++|-+......... ...+ ....++.|. ....+++++..|.|.+||+..
T Consensus 42 ~nAIs~nr~~~qiv~AGr-s~lklyai~~~~~~~~~~~~~k~kqn~~~S~~DVkW~~~~~NlIAT~s~nG~i~vWdlnk~ 120 (839)
T KOG0269|consen 42 ANAISVNRDINQIVVAGR-SLLKLYAINPNDFSEKCNHRFKTKQNKFYSAADVKWGQLYSNLIATCSTNGVISVWDLNKS 120 (839)
T ss_pred cceEeecCCcceeEEecc-cceeeEeeCcccCCcceeeecccccceeeehhhcccccchhhhheeecCCCcEEEEecCcc
Confidence 345555677777776654 46677765433221111 1111 112345564 345689999999999999987
Q ss_pred --CcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 327 --NRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 327 --~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
++.+..|..|...+++++|++.. .+|++||.||+|++||++..+-..+++.....|..|+|+|... ..+
T Consensus 121 ~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~--------~~F 192 (839)
T KOG0269|consen 121 IRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYG--------NKF 192 (839)
T ss_pred ccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeecccccccccccchhhhceeeccCCC--------ceE
Confidence 66777899999999999999875 5789999999999999999999999999899999999999753 478
Q ss_pred EEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe--eEEEEecCCCEEEEEEC
Q 010759 404 ASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK--IVKTYTGNGGIFEVCWN 480 (502)
Q Consensus 404 ~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~--~~~~~~~~~~i~~~~ws 480 (502)
+++...|.+++||++.. ++...+.+|.++|.|+.|+|++.||||||.|+.|+||+..+.+ .+.++..-..+..|.|.
T Consensus 193 ~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWR 272 (839)
T KOG0269|consen 193 ASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWR 272 (839)
T ss_pred EEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeec
Confidence 99999999999999854 4567789999999999999999999999999999999987653 45566666779999999
Q ss_pred CCCC-EEEEEEC--CCeEEEEEeeC
Q 010759 481 KEGD-KIAACFA--NHTVCVLDFRM 502 (502)
Q Consensus 481 ~~g~-~la~~~~--~~~v~v~~~~~ 502 (502)
|+-. +||+|+. |..|+|||+|+
T Consensus 273 P~~~~hLAtcsmv~dtsV~VWDvrR 297 (839)
T KOG0269|consen 273 PARSYHLATCSMVVDTSVHVWDVRR 297 (839)
T ss_pred cCccchhhhhhccccceEEEEeecc
Confidence 9874 8888865 77899999985
No 133
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=8.6e-24 Score=185.67 Aligned_cols=273 Identities=21% Similarity=0.350 Sum_probs=211.1
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
-.|+.|++-|.+|++|..||.|.|||.... ....+.+|..+|++++|+++|+.|+|+|.|..|++||+..+.+.+.+.+
T Consensus 26 a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf 105 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCANGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRF 105 (405)
T ss_pred cceEEeccCcceeeeeccCCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEc
Confidence 689999999999999999999999998653 4456889999999999999999999999999999999999998888776
Q ss_pred cccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeec----CCC-cceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 295 HSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFA----GHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 295 ~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~----~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
. .|+....|. +...++++-.+..-.+.++..++.. .+. +.. ....+..|.+.|+++++|...|.+.+++..
T Consensus 106 ~-spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~-~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 106 D-SPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHS-VLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred c-CccceeeeccccCCeEEEEEecCCcEEEEecCCcee-eccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 4 466666664 3344555555554555555542211 111 111 122345688999999999999999999999
Q ss_pred CCceeeecccCC-CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-------eE--EEEeeC--CCCCEEE
Q 010759 368 QDKYVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-------KL--LYSLNG--HREPVYS 435 (502)
Q Consensus 368 ~~~~~~~~~~~~-~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-------~~--~~~~~~--h~~~v~~ 435 (502)
+-+++..++... ..|..+.++..|. +|+.-+.|..||.|+++.- .+ .+.+.. .+..-.+
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~---------~liiNtsDRvIR~ye~~di~~~~r~~e~e~~~K~qDvVNk~~Wk~ 254 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGR---------FLIINTSDRVIRTYEISDIDDEGRDGEVEPEHKLQDVVNKLQWKK 254 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCc---------EEEEecCCceEEEEehhhhcccCccCCcChhHHHHHHHhhhhhhh
Confidence 999999888766 7888999988886 6788889999999987621 11 111110 1234567
Q ss_pred EEECCCCCEEEEEeC-CCcEEEEeCCCCeeEEEEecCC--CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 436 LAFSPTGEYLASGSL-DKSMHIWSLKEGKIVKTYTGNG--GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 436 l~~spdg~~lasgs~-Dg~i~iw~~~~~~~~~~~~~~~--~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++||.+|.|++.|+. -..++||....|.+++.+.|.. ...++.|+|---.+++- ..|.|+||..
T Consensus 255 ccfs~dgeYv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp~rp~i~si-~sg~v~iw~~ 321 (405)
T KOG1273|consen 255 CCFSGDGEYVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHPVRPIIASI-ASGVVYIWAV 321 (405)
T ss_pred eeecCCccEEEeccccceeEEEEecCCcceeeeecCCchhheeecccccceeeeeec-cCCceEEEEe
Confidence 899999999988774 4679999999999999998754 37899999998877776 7789999975
No 134
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.9e-22 Score=193.98 Aligned_cols=224 Identities=18% Similarity=0.265 Sum_probs=174.3
Q ss_pred eecccc-ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGH-TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H-~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.++.|| ...|.+++|+ ++..|+|.+.+|+|.-||+.+.+.. .......+.|++++.+|.+.
T Consensus 62 ~vi~g~~drsIE~L~W~-e~~RLFS~g~sg~i~EwDl~~lk~~-----------------~~~d~~gg~IWsiai~p~~~ 123 (691)
T KOG2048|consen 62 PVIHGPEDRSIESLAWA-EGGRLFSSGLSGSITEWDLHTLKQK-----------------YNIDSNGGAIWSIAINPENT 123 (691)
T ss_pred EEEecCCCCceeeEEEc-cCCeEEeecCCceEEEEecccCcee-----------------EEecCCCcceeEEEeCCccc
Confidence 455565 4689999999 6667889999999999999875421 11223467899999999999
Q ss_pred EEEEEECCCcEEEEECCCcee---EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee-----cc--
Q 010759 227 LLATGSYDGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-----HS-- 296 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~---~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-----~~-- 296 (502)
.++.|+.||.+..++...+.. ..+...++.|.+|+|+|++..+++|+.||.|++||+.++........ ..
T Consensus 124 ~l~IgcddGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~ 203 (691)
T KOG2048|consen 124 ILAIGCDDGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKRE 203 (691)
T ss_pred eEEeecCCceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCC
Confidence 999999999888887765443 24566789999999999999999999999999999988875552211 11
Q ss_pred -cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--e-
Q 010759 297 -GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--V- 372 (502)
Q Consensus 297 -~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~- 372 (502)
..+-++.+..+..++++..-|+|.+||...+..++.+..|.+.|.|++..+++..+++++.|+.|..|...+.+. +
T Consensus 204 ~~iVWSv~~Lrd~tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~~wv~ 283 (691)
T KOG2048|consen 204 PTIVWSVLFLRDSTIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKSEWVI 283 (691)
T ss_pred ceEEEEEEEeecCcEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCccceee
Confidence 123455556777889999999999999999999999999999999999999999999999999999888765532 1
Q ss_pred -eecccCCCcEEEEEEcc
Q 010759 373 -HDLREHSKEIYTIRWSP 389 (502)
Q Consensus 373 -~~~~~~~~~i~~~~~sp 389 (502)
.....|...+.+++..+
T Consensus 284 ~~~r~~h~hdvrs~av~~ 301 (691)
T KOG2048|consen 284 NSRRDLHAHDVRSMAVIE 301 (691)
T ss_pred eccccCCcccceeeeeec
Confidence 12234555566655544
No 135
>KOG2106 consensus Uncharacterized conserved protein, contains HELP and WD40 domains [Function unknown]
Probab=99.93 E-value=1.8e-22 Score=187.70 Aligned_cols=314 Identities=19% Similarity=0.308 Sum_probs=237.4
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
+-|.|++|.++|. ++||..+|.|.||+..+.. ..++.. .|.+.|.+++.-.+|.+|- |+.|
T Consensus 247 k~Vl~v~F~engd-viTgDS~G~i~Iw~~~~~~-------------~~k~~~----aH~ggv~~L~~lr~GtllS-GgKD 307 (626)
T KOG2106|consen 247 KFVLCVTFLENGD-VITGDSGGNILIWSKGTNR-------------ISKQVH----AHDGGVFSLCMLRDGTLLS-GGKD 307 (626)
T ss_pred eEEEEEEEcCCCC-EEeecCCceEEEEeCCCce-------------EEeEee----ecCCceEEEEEecCccEee-cCcc
Confidence 5699999999987 5689999999999864321 112211 5678999999999998665 9999
Q ss_pred CcEEEEECCC-------------c----------------------------eeEeecCCCCCEEEEEecCCCCEEEEec
Q 010759 235 GQARIWSTNG-------------D----------------------------LKCTLSKHKGPIFSLKWNKKGDYLLTGS 273 (502)
Q Consensus 235 g~i~iw~~~~-------------~----------------------------~~~~~~~h~~~V~~l~~~~~~~~l~sgs 273 (502)
+.|..||-+- . ......+|....++++.+|+.+++++++
T Consensus 308 Rki~~Wd~~y~k~r~~elPe~~G~iRtv~e~~~di~vGTtrN~iL~Gt~~~~f~~~v~gh~delwgla~hps~~q~~T~g 387 (626)
T KOG2106|consen 308 RKIILWDDNYRKLRETELPEQFGPIRTVAEGKGDILVGTTRNFILQGTLENGFTLTVQGHGDELWGLATHPSKNQLLTCG 387 (626)
T ss_pred ceEEeccccccccccccCchhcCCeeEEecCCCcEEEeeccceEEEeeecCCceEEEEecccceeeEEcCCChhheeecc
Confidence 9999997210 0 0112356888999999999999999999
Q ss_pred CCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE
Q 010759 274 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 353 (502)
Q Consensus 274 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 353 (502)
.|+.+++|+-..-+|...+ ..+..+++|.+...++.+...|...+.+..+...+..-.. ..++++++|+|+|.+||
T Consensus 388 qdk~v~lW~~~k~~wt~~~---~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv~~~~d-~~~ls~v~ysp~G~~lA 463 (626)
T KOG2106|consen 388 QDKHVRLWNDHKLEWTKII---EDPAECADFHPSGVVAVGTATGRWFVLDTETQDLVTIHTD-NEQLSVVRYSPDGAFLA 463 (626)
T ss_pred CcceEEEccCCceeEEEEe---cCceeEeeccCcceEEEeeccceEEEEecccceeEEEEec-CCceEEEEEcCCCCEEE
Confidence 9999999993333333333 3567788887777889999999999999988555544334 78999999999999999
Q ss_pred EEeCCCcEEEEeCCCCcee-ee-cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE------
Q 010759 354 SCSDDVTAKIWNMKQDKYV-HD-LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS------ 425 (502)
Q Consensus 354 sgs~dg~i~iwd~~~~~~~-~~-~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~------ 425 (502)
.|+.|+.|.||.+...... .. -+-+..+|+.+.|++++. +|.+-+.|-.|-+|.....+.+..
T Consensus 464 vgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~---------~~~~~S~d~eiLyW~~~~~~~~ts~kDvkW 534 (626)
T KOG2106|consen 464 VGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQ---------FLVSNSGDYEILYWKPSECKQITSVKDVKW 534 (626)
T ss_pred EecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCc---------eEEeccCceEEEEEccccCcccceecceee
Confidence 9999999999987654332 21 123448999999999986 889999999999995432211110
Q ss_pred -----------e-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC---eeEEEEecCCC-EEEEEECCCCCEEEEE
Q 010759 426 -----------L-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG---KIVKTYTGNGG-IFEVCWNKEGDKIAAC 489 (502)
Q Consensus 426 -----------~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~---~~~~~~~~~~~-i~~~~ws~~g~~la~~ 489 (502)
+ ..|...|+.++-+.+..+||+|.+.|.|++|...=- .....+.++++ |.+++|.-+..+|.+.
T Consensus 535 ~t~~c~lGF~v~g~s~~t~i~a~~rs~~~~~lA~gdd~g~v~lf~yPc~s~rA~~he~~ghs~~vt~V~Fl~~d~~li~t 614 (626)
T KOG2106|consen 535 ATYTCTLGFEVFGGSDGTDINAVARSHCEKLLASGDDFGKVHLFSYPCSSPRAPSHEYGGHSSHVTNVAFLCKDSHLIST 614 (626)
T ss_pred eeeEEEEEEEEecccCCchHHHhhhhhhhhhhhccccCceEEEEccccCCCcccceeeccccceeEEEEEeeCCceEEec
Confidence 1 134556777888888899999999999999986422 22344555555 7899999988888877
Q ss_pred ECCCeEEEEEe
Q 010759 490 FANHTVCVLDF 500 (502)
Q Consensus 490 ~~~~~v~v~~~ 500 (502)
..|.+|..|++
T Consensus 615 g~D~Si~qW~l 625 (626)
T KOG2106|consen 615 GKDTSIMQWRL 625 (626)
T ss_pred CCCceEEEEEe
Confidence 79999999976
No 136
>KOG4283 consensus Transcription-coupled repair protein CSA, contains WD40 domain [Transcription; Replication, recombination and repair]
Probab=99.93 E-value=3.8e-23 Score=180.03 Aligned_cols=276 Identities=21% Similarity=0.345 Sum_probs=207.2
Q ss_pred CCCCeEEEEECC-CCCEEEEEECCCcEEEEECCCc-----------eeEe-----ecCCCCCEEEEEecCCC-CEEEEec
Q 010759 212 KSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGD-----------LKCT-----LSKHKGPIFSLKWNKKG-DYLLTGS 273 (502)
Q Consensus 212 ~~~~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~-----------~~~~-----~~~h~~~V~~l~~~~~~-~~l~sgs 273 (502)
|.+.|.++...+ .|+|+++|+.||.|.+||++.. .++. -.+|+-.|.++.|-|-. ..|.++|
T Consensus 42 HgGsvNsL~id~tegrymlSGgadgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFtssS 121 (397)
T KOG4283|consen 42 HGGSVNSLQIDLTEGRYMLSGGADGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFTSSS 121 (397)
T ss_pred CCCccceeeeccccceEEeecCCCccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceeeccc
Confidence 456788888876 7899999999999999997531 1121 24688899999999854 5778899
Q ss_pred CCCeEEEEeccCcceeEEeeecccCeEEEecC----CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC
Q 010759 274 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR----NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG 349 (502)
Q Consensus 274 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 349 (502)
-|.++++||..|-+..-.|.... .|..-.+. ....++++..+-.|++||+..+..-..+.||.+.|.+|.|+|..
T Consensus 122 FDhtlKVWDtnTlQ~a~~F~me~-~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~ 200 (397)
T KOG4283|consen 122 FDHTLKVWDTNTLQEAVDFKMEG-KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSS 200 (397)
T ss_pred ccceEEEeecccceeeEEeecCc-eeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEEEeccCc
Confidence 99999999999877655554322 22222221 24567788888999999999999999999999999999999987
Q ss_pred CE-EEEEeCCCcEEEEeCCCC-ceeee--------------cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 350 SL-LASCSDDVTAKIWNMKQD-KYVHD--------------LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 350 ~~-l~sgs~dg~i~iwd~~~~-~~~~~--------------~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
.+ |++|+.||.|++||++.- .+... -.+|.+.+..++|..++. ++++++.|..++
T Consensus 201 e~vLatgsaDg~irlWDiRrasgcf~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~---------~l~~~gtd~r~r 271 (397)
T KOG4283|consen 201 EWVLATGSADGAIRLWDIRRASGCFRVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDAR---------YLASCGTDDRIR 271 (397)
T ss_pred eeEEEecCCCceEEEEEeecccceeEEeecccCccCccccccccccceeeeeeecccch---------hhhhccCccceE
Confidence 76 789999999999998753 22221 235677899999999986 788999999999
Q ss_pred EEeCCCCeEEEEe---eCCCC---CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCC-EEEEEECCCCCEE
Q 010759 414 LWDVELGKLLYSL---NGHRE---PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGG-IFEVCWNKEGDKI 486 (502)
Q Consensus 414 iwd~~~~~~~~~~---~~h~~---~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~-i~~~~ws~~g~~l 486 (502)
+|+..+|+....- ..|.. +-..+. +-+...++---.++.+.++++-.|..+..+.++.. +.+.++.|+-..+
T Consensus 272 ~wn~~~G~ntl~~~g~~~~n~~~~~~~~~~-~~~s~vfv~~p~~~~lall~~~sgs~ir~l~~h~k~i~c~~~~~~fq~~ 350 (397)
T KOG4283|consen 272 VWNMESGRNTLREFGPIIHNQTTSFAVHIQ-SMDSDVFVLFPNDGSLALLNLLEGSFVRRLSTHLKRINCAAYRPDFEQC 350 (397)
T ss_pred EeecccCcccccccccccccccccceEEEe-ecccceEEEEecCCeEEEEEccCceEEEeeecccceeeEEeecCchhhh
Confidence 9999887643211 11111 111133 33344455555568899999999998888877654 7888899999999
Q ss_pred EEEECCCeEEEE
Q 010759 487 AACFANHTVCVL 498 (502)
Q Consensus 487 a~~~~~~~v~v~ 498 (502)
.++..|+.|..|
T Consensus 351 ~tg~~d~ni~~w 362 (397)
T KOG4283|consen 351 FTGDMNGNIYMW 362 (397)
T ss_pred hccccCCccccc
Confidence 999999998777
No 137
>KOG2048 consensus WD40 repeat protein [General function prediction only]
Probab=99.93 E-value=1.3e-22 Score=195.20 Aligned_cols=278 Identities=21% Similarity=0.359 Sum_probs=216.2
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..+|.|+|||.+.+.||.+-.||.|-||++..+- +....+.+ +....|-.++|+ ++..|+|.+.
T Consensus 25 Ps~I~slA~s~kS~~lAvsRt~g~IEiwN~~~~w------------~~~~vi~g---~~drsIE~L~W~-e~~RLFS~g~ 88 (691)
T KOG2048|consen 25 PSEIVSLAYSHKSNQLAVSRTDGNIEIWNLSNNW------------FLEPVIHG---PEDRSIESLAWA-EGGRLFSSGL 88 (691)
T ss_pred ccceEEEEEeccCCceeeeccCCcEEEEccCCCc------------eeeEEEec---CCCCceeeEEEc-cCCeEEeecC
Confidence 4679999999999999999999999999986531 12222223 346789999999 5566788899
Q ss_pred CCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 234 DGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 234 dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
+|.|.-||+. ...+..+....++|++++.+|.+..++.|+.||.+..++...+.....
T Consensus 89 sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~~s~~p~~I~~~--------------------- 147 (691)
T KOG2048|consen 89 SGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYDFSIGPDKITYK--------------------- 147 (691)
T ss_pred CceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEEEecCCceEEEE---------------------
Confidence 9999999975 456667777889999999999999999999999777776655432110
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee-----ccc---CCCcEEE
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-----LRE---HSKEIYT 384 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~-----~~~---~~~~i~~ 384 (502)
..|.-.++.|.+++|+|++..+++|+.||.|++||..++..++. .+. ...-|++
T Consensus 148 ------------------r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWS 209 (691)
T KOG2048|consen 148 ------------------RSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWS 209 (691)
T ss_pred ------------------eecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEE
Confidence 11222357899999999999999999999999999998876651 111 1224567
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
+.|-.++ .|++|..-|+|++||...+.++..+..|...|.+|+-++++.+++++|.|+.|.-|...+.+.
T Consensus 210 v~~Lrd~----------tI~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~~~~d~vfsaGvd~~ii~~~~~~~~~ 279 (691)
T KOG2048|consen 210 VLFLRDS----------TIASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVADNEDRVFSAGVDPKIIQYSLTTNKS 279 (691)
T ss_pred EEEeecC----------cEEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEcCCCCeEEEccCCCceEEEEecCCcc
Confidence 7766555 589999999999999999999999999999999999999999999999999999998876643
Q ss_pred EEEE----ec-CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 465 VKTY----TG-NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 465 ~~~~----~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
.... .. ...+.+++..++ .|.+|+.|..+.|-
T Consensus 280 ~wv~~~~r~~h~hdvrs~av~~~--~l~sgG~d~~l~i~ 316 (691)
T KOG2048|consen 280 EWVINSRRDLHAHDVRSMAVIEN--ALISGGRDFTLAIC 316 (691)
T ss_pred ceeeeccccCCcccceeeeeecc--eEEecceeeEEEEc
Confidence 2111 11 234677776665 77788888777653
No 138
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.92 E-value=1.1e-23 Score=200.52 Aligned_cols=152 Identities=28% Similarity=0.541 Sum_probs=121.4
Q ss_pred eeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCc-------eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe
Q 010759 340 VNCVKWDP-TGSLLASCSDDVTAKIWNMKQDK-------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST 411 (502)
Q Consensus 340 v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~-------~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~ 411 (502)
|+.+.|.| |...||.+++||.|++|.+..+. +-..+..|...|++++|+|-... +|+++++|-+
T Consensus 630 vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAad--------vLa~asyd~T 701 (1012)
T KOG1445|consen 630 VTDLHWDPFDDERLAVATDDGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAAD--------VLAVASYDST 701 (1012)
T ss_pred eeecccCCCChHHeeecccCceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhh--------Hhhhhhccce
Confidence 55677877 45679999999999999986542 33456789999999999997542 7899999999
Q ss_pred EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCC----EEEEEECCCCCEEE
Q 010759 412 VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGG----IFEVCWNKEGDKIA 487 (502)
Q Consensus 412 i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~----i~~~~ws~~g~~la 487 (502)
|++||+++++....+.+|.+.|.+++|||||+.+|+.+.||+|++|+.+.+.. ..+.+++. ---+.|--||.+++
T Consensus 702 i~lWDl~~~~~~~~l~gHtdqIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e~-pv~Eg~gpvgtRgARi~wacdgr~vi 780 (1012)
T KOG1445|consen 702 IELWDLANAKLYSRLVGHTDQIFGIAWSPDGRRIATVCKDGTLRVYEPRSREQ-PVYEGKGPVGTRGARILWACDGRIVI 780 (1012)
T ss_pred eeeeehhhhhhhheeccCcCceeEEEECCCCcceeeeecCceEEEeCCCCCCC-ccccCCCCccCcceeEEEEecCcEEE
Confidence 99999999999999999999999999999999999999999999999887653 22333332 34578888998776
Q ss_pred EEECCC----eEEEEEe
Q 010759 488 ACFANH----TVCVLDF 500 (502)
Q Consensus 488 ~~~~~~----~v~v~~~ 500 (502)
..+.|. .|.+||.
T Consensus 781 v~Gfdk~SeRQv~~Y~A 797 (1012)
T KOG1445|consen 781 VVGFDKSSERQVQMYDA 797 (1012)
T ss_pred Eecccccchhhhhhhhh
Confidence 555443 4555553
No 139
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.92 E-value=7.7e-24 Score=196.24 Aligned_cols=267 Identities=19% Similarity=0.315 Sum_probs=206.5
Q ss_pred EeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC-CEEEEEECCCcEEEEECCCce--eE
Q 010759 172 GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNGDL--KC 248 (502)
Q Consensus 172 gs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-~~l~sg~~dg~i~iw~~~~~~--~~ 248 (502)
+|.-.+++|||+....... .+..+.. ...+.+++|+... -.+++.+.|..+++|...+.. +.
T Consensus 8 aS~gd~~kl~D~s~~~~~~-------------~~~~~t~--~pg~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~~~~Vp 72 (673)
T KOG4378|consen 8 ASTGDKTKLSDFSDLETKS-------------EYVHQTA--EPGDFSFNWQRRNFLVVASMAGDKVMRIKEKDGKTPEVP 72 (673)
T ss_pred eccCCceEEeecccccCcc-------------ccccCCC--CCcceeeeccccceEEEeecCCceeEEEecccCCCCccc
Confidence 3344579999987543211 0111111 2238999999876 344556678899999876651 11
Q ss_pred eec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC
Q 010759 249 TLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN 327 (502)
Q Consensus 249 ~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 327 (502)
.+. .....-+|++......|+++|+..++|+|||++...+
T Consensus 73 ~~~k~~gd~~~Cv~~~s~S~y~~sgG~~~~Vkiwdl~~kl~--------------------------------------- 113 (673)
T KOG4378|consen 73 RVRKLTGDNAFCVACASQSLYEISGGQSGCVKIWDLRAKLI--------------------------------------- 113 (673)
T ss_pred eeeccccchHHHHhhhhcceeeeccCcCceeeehhhHHHHH---------------------------------------
Confidence 111 1112345666666668999999999999999985432
Q ss_pred cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC-CCcEEEEEEccCCCCCCCCCCcEEEEEE
Q 010759 328 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILASA 406 (502)
Q Consensus 328 ~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~-~~~i~~~~~sp~g~~~~~~~~~~~l~sg 406 (502)
++.+++|...|++|.++....+||+++..|.|.|..+.++....+|... ...+.-+.|+|... .+|.++
T Consensus 114 --hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr--------~lL~~a 183 (673)
T KOG4378|consen 114 --HRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKR--------FLLSIA 183 (673)
T ss_pred --hhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccc--------eeeEee
Confidence 2356789999999999999999999999999999999988777666654 34556788988765 478999
Q ss_pred eCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC
Q 010759 407 SFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD 484 (502)
Q Consensus 407 s~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~ 484 (502)
+.+|.|.+||+....+.+.+ ..|..|...|+|+|.. .+||+.|.|+.|.+||....+....+.-..+...++|.++|.
T Consensus 184 sd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~y~~Plstvaf~~~G~ 263 (673)
T KOG4378|consen 184 SDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLTYSHPLSTVAFSECGT 263 (673)
T ss_pred ccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceeeecCCcceeeecCCce
Confidence 99999999999877777654 6799999999999976 577899999999999999888888888788899999999999
Q ss_pred EEEEEECCCeEEEEEeeC
Q 010759 485 KIAACFANHTVCVLDFRM 502 (502)
Q Consensus 485 ~la~~~~~~~v~v~~~~~ 502 (502)
+|++|..+|.|..||+|+
T Consensus 264 ~L~aG~s~G~~i~YD~R~ 281 (673)
T KOG4378|consen 264 YLCAGNSKGELIAYDMRS 281 (673)
T ss_pred EEEeecCCceEEEEeccc
Confidence 999999999999999996
No 140
>KOG0646 consensus WD40 repeat protein [General function prediction only]
Probab=99.92 E-value=6e-23 Score=189.42 Aligned_cols=263 Identities=20% Similarity=0.340 Sum_probs=204.7
Q ss_pred EEECC-CcEEEEECCCc-eeEeecCC-CCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 230 TGSYD-GQARIWSTNGD-LKCTLSKH-KGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 230 sg~~d-g~i~iw~~~~~-~~~~~~~h-~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+++.| .++.+||+... ...++.+- ...-.++..- .+.|++++.. -..+.+|.+.......++..-.+++.++...
T Consensus 12 ssS~d~~~~~~~dl~TGt~~~~ykg~~~a~~~sl~~l-~~~yllsaq~~rp~l~vw~i~k~~~~~q~~v~Pg~v~al~s~ 90 (476)
T KOG0646|consen 12 SSSFDPINCIVWDLRTGTSLLQYKGSYLAQAASLTAL-NNEYLLSAQLKRPLLHVWEILKKDQVVQYIVLPGPVHALASS 90 (476)
T ss_pred ccCCCCcceeEEecCCCceeEEecCcccccchhhhhh-chhheeeecccCccccccccCchhhhhhhcccccceeeeecC
Confidence 33444 45889997643 33344332 1111111111 2256666544 4578899987666555556667888999888
Q ss_pred CCceEEEEc-CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC---------CCceeeec
Q 010759 306 NNVSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK---------QDKYVHDL 375 (502)
Q Consensus 306 ~~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~---------~~~~~~~~ 375 (502)
+...|+.++ -.+.||+|.+.++..+..+.+|-..|+|+.|+-||.+|+|||.||.|.+|.+. +-++++.+
T Consensus 91 n~G~~l~ag~i~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a~~~~~~~p~~~f 170 (476)
T KOG0646|consen 91 NLGYFLLAGTISGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSADNDHSVKPLHIF 170 (476)
T ss_pred CCceEEEeecccCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeecccccCCCccceeee
Confidence 877777766 89999999999999999999999999999999999999999999999999752 34677888
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
..|.-+|+.+...+.|.. ..|+|+|.|.++++||+..+.++.++. ...+|++++.+|-++.+..|+.+|.|.
T Consensus 171 ~~HtlsITDl~ig~Gg~~-------~rl~TaS~D~t~k~wdlS~g~LLlti~-fp~si~av~lDpae~~~yiGt~~G~I~ 242 (476)
T KOG0646|consen 171 SDHTLSITDLQIGSGGTN-------ARLYTASEDRTIKLWDLSLGVLLLTIT-FPSSIKAVALDPAERVVYIGTEEGKIF 242 (476)
T ss_pred ccCcceeEEEEecCCCcc-------ceEEEecCCceEEEEEeccceeeEEEe-cCCcceeEEEcccccEEEecCCcceEE
Confidence 999999999998776532 378999999999999999999988876 557899999999999999999999999
Q ss_pred EEeCCCCe----------------eEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 456 IWSLKEGK----------------IVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~----------------~~~~~~~~---~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.++.+.. .+..+.++ ..|++++.+.||..|++|+.||.|+|||+.
T Consensus 243 ~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~VcvWdi~ 307 (476)
T KOG0646|consen 243 QNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKVCVWDIY 307 (476)
T ss_pred eeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCEEEEecc
Confidence 88865322 23334443 369999999999999999999999999975
No 141
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.92 E-value=2.3e-23 Score=187.16 Aligned_cols=257 Identities=25% Similarity=0.491 Sum_probs=191.2
Q ss_pred eccccccceeEEEECCCC--CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 149 ILEGHTSEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~--~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..-+|.+.|+-+.-++-+ .+.|+=+..|.|+||++..... + ++..+
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~-----------------------------~--l~~~~- 193 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLN-----------------------------A--LSEPG- 193 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhh-----------------------------h--hcCcc-
Confidence 345688889888888765 4667777889999999753210 0 00000
Q ss_pred EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+. +-+.....+.++.+|.+.-++|+|+|-- ..|+||..-+.|++|...++.|..
T Consensus 194 ~~----------~~~s~~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~v--------------- 248 (440)
T KOG0302|consen 194 LE----------VKDSEFRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKV--------------- 248 (440)
T ss_pred cc----------ccccccCceEEecccCccceeeecccccccccccCccccceEeeeeccCceee---------------
Confidence 00 0012334566788999999999999943 348888888999999888776531
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCC---ceeeecccCCCc
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQD---KYVHDLREHSKE 381 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~---~~~~~~~~~~~~ 381 (502)
. ...|.+|+..|..++|||.. ..|+|||-||+|+|||++.+ .++. .++|.+.
T Consensus 249 -------------------d----~~Pf~gH~~SVEDLqWSptE~~vfaScS~DgsIrIWDiRs~~~~~~~~-~kAh~sD 304 (440)
T KOG0302|consen 249 -------------------D----QRPFTGHTKSVEDLQWSPTEDGVFASCSCDGSIRIWDIRSGPKKAAVS-TKAHNSD 304 (440)
T ss_pred -------------------c----CccccccccchhhhccCCccCceEEeeecCceEEEEEecCCCccceeE-eeccCCc
Confidence 1 12466899999999999975 57899999999999999987 3333 3789999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC---CeEEEEeeCCCCCEEEEEECCC-CCEEEEEeCCCcEEEE
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL---GKLLYSLNGHREPVYSLAFSPT-GEYLASGSLDKSMHIW 457 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~---~~~~~~~~~h~~~v~~l~~spd-g~~lasgs~Dg~i~iw 457 (502)
|..|.|+..-. +||+|+.||+++|||++. ++++..++-|..+|++|.|+|. ...|+++|.|..|.||
T Consensus 305 VNVISWnr~~~---------lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pItsieW~p~e~s~iaasg~D~QitiW 375 (440)
T KOG0302|consen 305 VNVISWNRREP---------LLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITSIEWHPHEDSVIAASGEDNQITIW 375 (440)
T ss_pred eeeEEccCCcc---------eeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeEEEeccccCceEEeccCCCcEEEE
Confidence 99999987653 799999999999999984 5688999999999999999996 4678889999999999
Q ss_pred eCCCCe-------------------eEEEEecCCCEEEEEECCCCC-EEEEEECCCeE
Q 010759 458 SLKEGK-------------------IVKTYTGNGGIFEVCWNKEGD-KIAACFANHTV 495 (502)
Q Consensus 458 ~~~~~~-------------------~~~~~~~~~~i~~~~ws~~g~-~la~~~~~~~v 495 (502)
|+.-.. ++....+...+-.+.|++.-. +|++.+.+|.-
T Consensus 376 DlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQke~KevhWH~QiPG~lvsTa~dGfn 433 (440)
T KOG0302|consen 376 DLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQKEVKEVHWHRQIPGLLVSTAIDGFN 433 (440)
T ss_pred EeeccCChhhhccccccchhcCCceeEEEecchhHhhhheeccCCCCeEEEeccccee
Confidence 985211 122222333477899999754 66666777643
No 142
>KOG2445 consensus Nuclear pore complex component (sc Seh1) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.92 E-value=1.3e-22 Score=177.76 Aligned_cols=243 Identities=23% Similarity=0.415 Sum_probs=188.7
Q ss_pred ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC--c--ceeEEeeecccCeEEEecCC---CceEEEEcCCCeEEEE
Q 010759 250 LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT--E--EWKQQFEFHSGPTLDVDWRN---NVSFATSSTDNMIYVC 322 (502)
Q Consensus 250 ~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~--~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~~~ 322 (502)
..+|..-|.++.|.+.|+++++||.|++++|||.+. + .+...+..|.+.+..+.|.. ...+++++.|+++.+|
T Consensus 9 ~s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iW 88 (361)
T KOG2445|consen 9 DSGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIW 88 (361)
T ss_pred ccCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeee
Confidence 357889999999999999999999999999999643 2 35567889999999999853 4568899999999999
Q ss_pred EcCCC---------cceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCC------CCceeeecc-------cC
Q 010759 323 KIGEN---------RPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMK------QDKYVHDLR-------EH 378 (502)
Q Consensus 323 ~~~~~---------~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~------~~~~~~~~~-------~~ 378 (502)
.-... ....++....+.|+.|+|.|. |-.+|+++.||.+|||+.- ...+.++++ .+
T Consensus 89 EE~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~ 168 (361)
T KOG2445|consen 89 EEQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKN 168 (361)
T ss_pred eecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCcccc
Confidence 86321 123455566788999999985 5679999999999999753 333344444 45
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCC----eEEEEeeCCCCCEEEEEECCC-C---CEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELG----KLLYSLNGHREPVYSLAFSPT-G---EYL 445 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~----~~~~~~~~h~~~v~~l~~spd-g---~~l 445 (502)
..+..|+.|+|.-. +..+||.|+.+ +.++||....+ ..+.++.+|..+|++|+|.|+ | .+|
T Consensus 169 ~~~~~CvsWn~sr~------~~p~iAvgs~e~a~~~~~~~Iye~~e~~rKw~kva~L~d~~dpI~di~wAPn~Gr~y~~l 242 (361)
T KOG2445|consen 169 KQPCFCVSWNPSRM------HEPLIAVGSDEDAPHLNKVKIYEYNENGRKWLKVAELPDHTDPIRDISWAPNIGRSYHLL 242 (361)
T ss_pred cCcceEEeeccccc------cCceEEEEcccCCccccceEEEEecCCcceeeeehhcCCCCCcceeeeeccccCCceeeE
Confidence 67889999986532 22367777765 47889875432 345678899999999999997 3 479
Q ss_pred EEEeCCCcEEEEeCCCC--------------------eeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 446 ASGSLDKSMHIWSLKEG--------------------KIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~--------------------~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
|+|+.|| |+||.++.. +.+..+.+ ++.|+.++|+--|..|++.+.||+|++|-
T Consensus 243 AvA~kDg-v~I~~v~~~~s~i~~ee~~~~~~~~~l~v~~vs~~~~H~~~VWrv~wNmtGtiLsStGdDG~VRLWk 316 (361)
T KOG2445|consen 243 AVATKDG-VRIFKVKVARSAIEEEEVLAPDLMTDLPVEKVSELDDHNGEVWRVRWNMTGTILSSTGDDGCVRLWK 316 (361)
T ss_pred EEeecCc-EEEEEEeeccchhhhhcccCCCCccccceEEeeeccCCCCceEEEEEeeeeeEEeecCCCceeeehh
Confidence 9999999 999998731 11233433 45799999999999999999999999983
No 143
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.92 E-value=6.6e-24 Score=200.09 Aligned_cols=267 Identities=22% Similarity=0.336 Sum_probs=197.6
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.-.+++.|.+.|++++|+|....|++|+.||+|++|+++.... .....+..+..++ +|.++|.|+++++.+
T Consensus 286 ik~tl~s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~-----s~~~~~epi~tfr----aH~gPVl~v~v~~n~ 356 (577)
T KOG0642|consen 286 IKFTLRSHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKK-----SAEKDVEPILTFR----AHEGPVLCVVVPSNG 356 (577)
T ss_pred eeeeeecchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCC-----ccccceeeeEEEe----cccCceEEEEecCCc
Confidence 3458899999999999999999999999999999999954211 1112233334444 357899999999999
Q ss_pred CEEEEEECCCcEEEEECCC-----------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 226 TLLATGSYDGQARIWSTNG-----------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-----------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
.++++||-||+|+.|++.. .+...+.||++.|+.+++|+...+|++||.||++++|+...... .+|..
T Consensus 357 ~~~ysgg~Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~-~~f~~ 435 (577)
T KOG0642|consen 357 EHCYSGGIDGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTVRLWEPTEESP-CTFGE 435 (577)
T ss_pred eEEEeeccCceeeeeccCCCCCcccccCcchhccceeccccceeeeeecccccceeeecCCceEEeeccCCcCc-cccCC
Confidence 9999999999999996531 13346789999999999999999999999999999999766544 22221
Q ss_pred --cccCeEEEecCCCc--eEEEEcCCCeEEEEEcCCCcceeeecCC-------CcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 295 --HSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGH-------QGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 295 --~~~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
..+..+.+++.... ..+++..-+.--+.+......++.+... ...++.+.++|.+.+.+++..|+.|++
T Consensus 436 ~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~~~~~~~~~hed~~Ir~ 515 (577)
T KOG0642|consen 436 PKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHPTADITFTAHEDRSIRF 515 (577)
T ss_pred ccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecCCCCeeEecccCCceec
Confidence 12223344442221 1111111111112222222222222211 134778899999999999999999999
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 431 (502)
+|..++.+++.+..|...++++++.|+|. +|++|+.||.+++|.+....++.....|+.
T Consensus 516 ~dn~~~~~l~s~~a~~~svtslai~~ng~---------~l~s~s~d~sv~l~kld~k~~~~es~~~r~ 574 (577)
T KOG0642|consen 516 FDNKTGKILHSMVAHKDSVTSLAIDPNGP---------YLMSGSHDGSVRLWKLDVKTCVLESTAHRK 574 (577)
T ss_pred ccccccccchheeeccceecceeecCCCc---------eEEeecCCceeehhhccchheeeccccccc
Confidence 99999999999999999999999999986 899999999999999988888877776653
No 144
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.92 E-value=7.7e-23 Score=180.32 Aligned_cols=288 Identities=26% Similarity=0.442 Sum_probs=209.3
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC-------CCCCEEEE
Q 010759 158 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-------GEGTLLAT 230 (502)
Q Consensus 158 ~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s-------~~~~~l~s 230 (502)
..+.|||||.-|++-+.|..+++|++........+ .+++.... +..-++ .....|+..+|- |+..++++
T Consensus 53 kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~-~~~~~~~~--~~~~r~-~eg~tvydy~wYs~M~s~qP~t~l~a~ 128 (406)
T KOG2919|consen 53 KGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKA-DGPLNFSK--HLSYRY-QEGETVYDYCWYSRMKSDQPSTNLFAV 128 (406)
T ss_pred ccceeCCCCceEEeecccCeeeEEecChhhcccCC-CCcccccc--ceeEEe-ccCCEEEEEEeeeccccCCCccceeee
Confidence 35789999999999999999999998643221111 11111111 111111 123457888885 67889999
Q ss_pred EECCCcEEEEEC-CCceeEeecC--CCC---CEEEEEecCCCCEEEEecCCCeEEEEec-cCcceeEEeeecccCeEEEe
Q 010759 231 GSYDGQARIWST-NGDLKCTLSK--HKG---PIFSLKWNKKGDYLLTGSCDKTAIVWDV-KTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 231 g~~dg~i~iw~~-~~~~~~~~~~--h~~---~V~~l~~~~~~~~l~sgs~D~~v~iwd~-~~~~~~~~~~~~~~~~~~~~ 303 (502)
.+.+.-|++||. .+.+.+.+.. |.. +..+|+|+|+|.+|++|. .++|+++|+ +.+.....+..
T Consensus 129 ssr~~PIh~wdaftG~lraSy~~ydh~de~taAhsL~Fs~DGeqlfaGy-krcirvFdt~RpGr~c~vy~t--------- 198 (406)
T KOG2919|consen 129 SSRDQPIHLWDAFTGKLRASYRAYDHQDEYTAAHSLQFSPDGEQLFAGY-KRCIRVFDTSRPGRDCPVYTT--------- 198 (406)
T ss_pred ccccCceeeeeccccccccchhhhhhHHhhhhheeEEecCCCCeEeecc-cceEEEeeccCCCCCCcchhh---------
Confidence 999999999996 4566665543 333 347899999999999875 579999998 55432111100
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCceeeecccCCCcE
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 382 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i 382 (502)
..+--.+..+.|.|++|+|.. +.++.|+...++-||....+.++..+.+|.+.|
T Consensus 199 -------------------------~~~~k~gq~giisc~a~sP~~~~~~a~gsY~q~~giy~~~~~~pl~llggh~gGv 253 (406)
T KOG2919|consen 199 -------------------------VTKGKFGQKGIISCFAFSPMDSKTLAVGSYGQRVGIYNDDGRRPLQLLGGHGGGV 253 (406)
T ss_pred -------------------------hhcccccccceeeeeeccCCCCcceeeecccceeeeEecCCCCceeeecccCCCe
Confidence 000012345678999999965 489999999999999988999999999999999
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-CeEEEEeeCCCC-CEEEEEE--CCCCCEEEEEeCCCcEEEE
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-GKLLYSLNGHRE-PVYSLAF--SPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-~~~~~~~~~h~~-~v~~l~~--spdg~~lasgs~Dg~i~iw 457 (502)
+.++|.++|. -|.+|+ .|-.|-.||++. ..+++.+..|.+ .-..|-| .|+|++||+|+.||.|++|
T Consensus 254 ThL~~~edGn---------~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vw 324 (406)
T KOG2919|consen 254 THLQWCEDGN---------KLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASGDTDGSVRVW 324 (406)
T ss_pred eeEEeccCcC---------eecccccCCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeeccCCCccEEEE
Confidence 9999999996 355655 578899999985 456778877765 3344555 5889999999999999999
Q ss_pred eCCC-CeeEEEEec-CCCEEEEEECCCCCEEEEEECCC
Q 010759 458 SLKE-GKIVKTYTG-NGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 458 ~~~~-~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
|+++ |..+..+.. ...++.++++|.--++|+++.+.
T Consensus 325 dlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr 362 (406)
T KOG2919|consen 325 DLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQR 362 (406)
T ss_pred ecCCCCCcccccccccccccceecCcccceeeeccCce
Confidence 9988 654444433 45689999999988999888764
No 145
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.91 E-value=2.5e-20 Score=186.02 Aligned_cols=327 Identities=34% Similarity=0.636 Sum_probs=254.6
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE-CCCCC-
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEGT- 226 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~-s~~~~- 226 (502)
.+.+|...|.++.|.+.+..++.++.|+.+.+|+...+.. ....+.... ...+..+.+ ++++.
T Consensus 60 ~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~------------~~~~~~~~~---~~~~~~~~~~~~~~~~ 124 (466)
T COG2319 60 LLRGHEDSITSIAFSPDGELLLSGSSDGTIKLWDLDNGEK------------LIKSLEGLH---DSSVSKLALSSPDGNS 124 (466)
T ss_pred eeeeccceEEEEEECCCCcEEEEecCCCcEEEEEcCCCce------------eEEEEeccC---CCceeeEEEECCCcce
Confidence 5668999999999999999999999999999999876530 011111110 135666666 78887
Q ss_pred EEEEEEC-CCcEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 227 LLATGSY-DGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 227 ~l~sg~~-dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
+++..+. |+.+++|+... .....+..|...|..++|+|++.++++++. |+.+++|++.++.....+..|...+..+
T Consensus 125 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 204 (466)
T COG2319 125 ILLASSSLDGTVKLWDLSTPGKLIRTLEGHSESVTSLAFSPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSL 204 (466)
T ss_pred EEeccCCCCccEEEEEecCCCeEEEEEecCcccEEEEEECCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEE
Confidence 5555445 99999999885 667788899999999999999999888886 9999999999888888888889999999
Q ss_pred ecCCCce-EE-EEcCCCeEEEEEcCCCccee-eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-eeecccC
Q 010759 303 DWRNNVS-FA-TSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREH 378 (502)
Q Consensus 303 ~~~~~~~-~~-~~~~d~~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~~ 378 (502)
.|..... ++ +++.|+.+++|+......+. .+.+|.... ...|+|++.++++++.|+.+++|++..... +..+..|
T Consensus 205 ~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 283 (466)
T COG2319 205 AFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSDSV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGH 283 (466)
T ss_pred EEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCcce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecC
Confidence 9875543 44 44899999999888666666 688888775 448999999999999999999999986664 4444567
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEE-eCCCcEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASG-SLDKSMH 455 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasg-s~Dg~i~ 455 (502)
...+.++.|.|++. .+++++.|+.+++|+........... .|...|..+.|++++..++.+ ..|+.+.
T Consensus 284 ~~~v~~~~~~~~~~---------~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 354 (466)
T COG2319 284 SSSVLSVAFSPDGK---------LLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSGGSDDGTIR 354 (466)
T ss_pred CccEEEEEECCCCC---------EEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEeecCCCcEE
Confidence 88999999999554 45568888999999998887776665 788889999994343566655 6889999
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECCCCCEEEE-EECCCeEEEEEee
Q 010759 456 IWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAA-CFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~-~~~~~~v~v~~~~ 501 (502)
+|+...............+..+.|++ ...++. +..++.+.+|+..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 400 (466)
T COG2319 355 LWDLRTGKPLKTLEGHSNVLSVSFSP-DGRVVSSGSTDGTVRLWDLS 400 (466)
T ss_pred eeecCCCceeEEecCCceEEEEEECC-CCCEEEEecCCCceEEEecc
Confidence 99998876333333333388999999 544444 6888999999875
No 146
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.91 E-value=4e-22 Score=176.29 Aligned_cols=297 Identities=20% Similarity=0.393 Sum_probs=207.1
Q ss_pred eeccccccceeEEEECC----C-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 148 TILEGHTSEVCACAWSP----A-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~sp----d-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
++..+|+.+|.+++|++ + -..+||.|. ..+.||....... ...+.... ...+...-..++|+
T Consensus 32 ~l~ed~~~~I~gv~fN~~~~~~e~~vfatvG~-~rvtiy~c~~d~~----------ir~lq~y~--D~d~~Esfytcsw~ 98 (385)
T KOG1034|consen 32 HLKEDHNKPIFGVAFNSFLGCDEPQVFATVGG-NRVTIYECPGDGG----------IRLLQSYA--DEDHDESFYTCSWS 98 (385)
T ss_pred ehhccCCCccceeeeehhcCCCCCceEEEeCC-cEEEEEEECCccc----------eeeeeecc--CCCCCcceEEEEEE
Confidence 45678999999999985 2 245666654 5688888653210 00111111 11234456677776
Q ss_pred CC----CCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 223 GE----GTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 223 ~~----~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
-+ ..+++.||.-|.|+|.|... .....+.+|..+|..++|+|.. +++++||.|.+||+||++++.++..|.
T Consensus 99 yd~~~~~p~la~~G~~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfG--- 175 (385)
T KOG1034|consen 99 YDSNTGNPFLAAGGYLGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFG--- 175 (385)
T ss_pred ecCCCCCeeEEeecceeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEec---
Confidence 43 45889999999999999764 5556789999999999999976 688999999999999999987765543
Q ss_pred cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc
Q 010759 297 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 376 (502)
-+.||.+.|.+++|+++|.+|++|+.|.+|++|++........+.
T Consensus 176 -----------------------------------G~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE 220 (385)
T KOG1034|consen 176 -----------------------------------GVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLE 220 (385)
T ss_pred -----------------------------------ccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhh
Confidence 245899999999999999999999999999999997543221111
Q ss_pred cCCCcEEEEEEccCCCCC-------CCCC------C----------cEEEEEEeCCCeEEEEeCC-CCe-----------
Q 010759 377 EHSKEIYTIRWSPTGSGT-------NNPN------Q----------QLILASASFDSTVKLWDVE-LGK----------- 421 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~-------~~~~------~----------~~~l~sgs~dg~i~iwd~~-~~~----------- 421 (502)
. ++.|+|++... .-|. + ..+++|-|.++.|..|... -.+
T Consensus 221 ~------s~~~~~~~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es~ 294 (385)
T KOG1034|consen 221 L------SITYSPNKTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWFGDFILSKSCENAIVCWKPGKLEESIHNVKPPESA 294 (385)
T ss_pred h------hcccCCCCccCcCCccccccccccccccccchHHHHHHHhhheeecccCceEEEEecchhhhhhhccCCCccc
Confidence 0 11222222110 0000 0 0157888889999999872 111
Q ss_pred --EEEEeeCCCCCEEEEEE--CCCCCEEEEEeCCCcEEEEeCCCCee--EEEEec---CCCEEEEEECCCCCEEEEEECC
Q 010759 422 --LLYSLNGHREPVYSLAF--SPTGEYLASGSLDKSMHIWSLKEGKI--VKTYTG---NGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 422 --~~~~~~~h~~~v~~l~~--spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~~---~~~i~~~~ws~~g~~la~~~~~ 492 (502)
.+.++.-....|+-|.| .|-+++||.|...|.|.+||++.... ..++.+ ...|.-.+|+.||..|++...+
T Consensus 295 ~Ti~~~~~~~~c~iWfirf~~d~~~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs~lv~vcdd 374 (385)
T KOG1034|consen 295 TTILGEFDYPMCDIWFIRFAFDPWQKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGSILVLVCDD 374 (385)
T ss_pred eeeeeEeccCccceEEEEEeecHHHHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCcEEEEEeCC
Confidence 12233333345666654 56689999999999999999987544 222322 3458899999999999999999
Q ss_pred CeEEEEEee
Q 010759 493 HTVCVLDFR 501 (502)
Q Consensus 493 ~~v~v~~~~ 501 (502)
++|.-||..
T Consensus 375 ~~Vwrwdrv 383 (385)
T KOG1034|consen 375 GTVWRWDRV 383 (385)
T ss_pred CcEEEEEee
Confidence 999999864
No 147
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.91 E-value=9.4e-23 Score=187.02 Aligned_cols=237 Identities=24% Similarity=0.373 Sum_probs=178.4
Q ss_pred eEEEEECC-------CCCEEEEEECCCcEEEEECCC--c--eeE------------------eecCCCCCEEEEEecCCC
Q 010759 216 VTTLDWNG-------EGTLLATGSYDGQARIWSTNG--D--LKC------------------TLSKHKGPIFSLKWNKKG 266 (502)
Q Consensus 216 V~~l~~s~-------~~~~l~sg~~dg~i~iw~~~~--~--~~~------------------~~~~h~~~V~~l~~~~~~ 266 (502)
-.|++|.. -|+|+|.|..|..|.|||+.- . ... .-.+|+.+|..|.|+..-
T Consensus 176 PLC~ewld~~~~~~~~gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~ 255 (463)
T KOG0270|consen 176 PLCIEWLDHGSKSGGAGNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNF 255 (463)
T ss_pred chhhhhhhcCCCCCCCcceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhcccc
Confidence 35666632 468999999999999999631 0 000 123688888889888754
Q ss_pred -CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 267 -DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 267 -~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
+.|+|||.|.+|++||+.++++.. .+..|.+.|.++.|
T Consensus 256 ~nVLaSgsaD~TV~lWD~~~g~p~~-----------------------------------------s~~~~~k~Vq~l~w 294 (463)
T KOG0270|consen 256 RNVLASGSADKTVKLWDVDTGKPKS-----------------------------------------SITHHGKKVQTLEW 294 (463)
T ss_pred ceeEEecCCCceEEEEEcCCCCcce-----------------------------------------ehhhcCCceeEEEe
Confidence 568899999999999998876543 44457788999999
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEE
Q 010759 346 DPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLL 423 (502)
Q Consensus 346 ~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~ 423 (502)
+|. ...|++|+.|+++.+.|.+........-...+.|-.++|.|... ..++++..||+|+-+|+|+. +++
T Consensus 295 h~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~se--------~~f~~~tddG~v~~~D~R~~~~~v 366 (463)
T KOG0270|consen 295 HPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPHSE--------NSFFVSTDDGTVYYFDIRNPGKPV 366 (463)
T ss_pred cCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCCCc--------eeEEEecCCceEEeeecCCCCCce
Confidence 986 46789999999999999984222211112356788899988754 46778899999999999965 899
Q ss_pred EEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCC--CeeEEEEec-CCCEEEEEECCCC-CEEEEEECCCeEEEE
Q 010759 424 YSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKE--GKIVKTYTG-NGGIFEVCWNKEG-DKIAACFANHTVCVL 498 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~--~~~~~~~~~-~~~i~~~~ws~~g-~~la~~~~~~~v~v~ 498 (502)
+++++|.++|.+|++++.- .+|+|+|.|+.|++|++.. .+.++.-.- .+...+.++.|+- -.||+|+..+.++||
T Consensus 367 wt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~a~~la~GG~k~~~~vw 446 (463)
T KOG0270|consen 367 WTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDVAFTLAFGGEKAVLRVW 446 (463)
T ss_pred eEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCcceEEEecCccceEEEe
Confidence 9999999999999999865 5788999999999999864 333332221 2335566677764 388889989999999
Q ss_pred Eee
Q 010759 499 DFR 501 (502)
Q Consensus 499 ~~~ 501 (502)
|+.
T Consensus 447 d~~ 449 (463)
T KOG0270|consen 447 DIF 449 (463)
T ss_pred ecc
Confidence 963
No 148
>KOG1036 consensus Mitotic spindle checkpoint protein BUB3, WD repeat superfamily [Cell cycle control, cell division, chromosome partitioning]
Probab=99.91 E-value=6.7e-22 Score=173.67 Aligned_cols=235 Identities=16% Similarity=0.257 Sum_probs=187.1
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
....|..+.|+|.+..|+.++.||.+++|+.........-.|..|+.+++|.+. ..+++|+.||.|+.+|+.++..
T Consensus 12 P~d~IS~v~f~~~~~~LLvssWDgslrlYdv~~~~l~~~~~~~~plL~c~F~d~-~~~~~G~~dg~vr~~Dln~~~~--- 87 (323)
T KOG1036|consen 12 PEDGISSVKFSPSSSDLLVSSWDGSLRLYDVPANSLKLKFKHGAPLLDCAFADE-STIVTGGLDGQVRRYDLNTGNE--- 87 (323)
T ss_pred ChhceeeEEEcCcCCcEEEEeccCcEEEEeccchhhhhheecCCceeeeeccCC-ceEEEeccCceEEEEEecCCcc---
Confidence 356799999999999999999999999999876655455579999999999974 5789999999999999987642
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
..+..|...|.|+.+++-...+++||.|++|++||.+....
T Consensus 88 ---------------------------------------~~igth~~~i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~ 128 (323)
T KOG1036|consen 88 ---------------------------------------DQIGTHDEGIRCIEYSYEVGCVISGSWDKTIKFWDPRNKVV 128 (323)
T ss_pred ---------------------------------------eeeccCCCceEEEEeeccCCeEEEcccCccEEEEecccccc
Confidence 12345888999999999888999999999999999987555
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEEe
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs 449 (502)
+..+. ....|+++....+ .|+.|..|..|.+||+++....+... ...-.+.||++-|++.-.|.+|
T Consensus 129 ~~~~d-~~kkVy~~~v~g~-----------~LvVg~~~r~v~iyDLRn~~~~~q~reS~lkyqtR~v~~~pn~eGy~~sS 196 (323)
T KOG1036|consen 129 VGTFD-QGKKVYCMDVSGN-----------RLVVGTSDRKVLIYDLRNLDEPFQRRESSLKYQTRCVALVPNGEGYVVSS 196 (323)
T ss_pred ccccc-cCceEEEEeccCC-----------EEEEeecCceEEEEEcccccchhhhccccceeEEEEEEEecCCCceEEEe
Confidence 54443 3347888765433 57788899999999999876554322 2345689999999999999999
Q ss_pred CCCcEEEEeCCCC----eeEEEEecC----------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 450 LDKSMHIWSLKEG----KIVKTYTGN----------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 450 ~Dg~i~iw~~~~~----~~~~~~~~~----------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
-||+|.+=.+... +.-..|..| .+|++++|+|--..||+|+.||.|.+||+.
T Consensus 197 ieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tfaTgGsDG~V~~Wd~~ 262 (323)
T KOG1036|consen 197 IEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTFATGGSDGIVNIWDLF 262 (323)
T ss_pred ecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceEEecCCCceEEEccCc
Confidence 9999887666544 222233322 257899999999999999999999999974
No 149
>KOG1273 consensus WD40 repeat protein [General function prediction only]
Probab=99.90 E-value=1.2e-21 Score=172.31 Aligned_cols=289 Identities=16% Similarity=0.306 Sum_probs=203.7
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
.|....++|.... ..||.||+.|.+||.|..||.|.|||+.+.. .......|..+|++++|
T Consensus 13 ~PEel~~tld~~~--a~~~~Fs~~G~~lAvGc~nG~vvI~D~~T~~-----------------iar~lsaH~~pi~sl~W 73 (405)
T KOG1273|consen 13 YPEELTHTLDNPL--AECCQFSRWGDYLAVGCANGRVVIYDFDTFR-----------------IARMLSAHVRPITSLCW 73 (405)
T ss_pred ChHhhceeccCCc--cceEEeccCcceeeeeccCCcEEEEEccccc-----------------hhhhhhccccceeEEEe
Confidence 3444445555322 7899999999999999999999999987643 11223456788999999
Q ss_pred CCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeeccc--
Q 010759 222 NGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-- 297 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~-- 297 (502)
|++|+.|++++.|..|.+||+. +.+...+ ...++|+...|+|... .+++.-.+..-.+-++.... ...+.....
T Consensus 74 S~dgr~LltsS~D~si~lwDl~~gs~l~ri-rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~-h~~Lp~d~d~d 151 (405)
T KOG1273|consen 74 SRDGRKLLTSSRDWSIKLWDLLKGSPLKRI-RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPK-HSVLPKDDDGD 151 (405)
T ss_pred cCCCCEeeeecCCceeEEEeccCCCceeEE-EccCccceeeeccccCCeEEEEEecCCcEEEEecCCc-eeeccCCCccc
Confidence 9999999999999999999975 4444444 3578999999999654 34444444444444433211 111111110
Q ss_pred --CeE-EEec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC---
Q 010759 298 --PTL-DVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--- 369 (502)
Q Consensus 298 --~~~-~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~--- 369 (502)
.+. ...| +....++++...|.+.+++..+.+.+..++--. ..|..+-++..|.+|+..+.|+.||.|+++.-
T Consensus 152 ln~sas~~~fdr~g~yIitGtsKGkllv~~a~t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRvIR~ye~~di~~~ 231 (405)
T KOG1273|consen 152 LNSSASHGVFDRRGKYIITGTSKGKLLVYDAETLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRVIRTYEISDIDDE 231 (405)
T ss_pred cccccccccccCCCCEEEEecCcceEEEEecchheeeeeeeechheeeeEEEEeccCcEEEEecCCceEEEEehhhhccc
Confidence 000 0113 345567888999999999999888877776544 67888999999999999999999999987521
Q ss_pred ---ce---eeeccc--CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-CCEEEEEECC
Q 010759 370 ---KY---VHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-EPVYSLAFSP 440 (502)
Q Consensus 370 ---~~---~~~~~~--~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~sp 440 (502)
.. .+.++. ...+-.+++|+.+|. ++.++......++||....|.++..+.|.. ....++.|+|
T Consensus 232 ~r~~e~e~~~K~qDvVNk~~Wk~ccfs~dge--------Yv~a~s~~aHaLYIWE~~~GsLVKILhG~kgE~l~DV~whp 303 (405)
T KOG1273|consen 232 GRDGEVEPEHKLQDVVNKLQWKKCCFSGDGE--------YVCAGSARAHALYIWEKSIGSLVKILHGTKGEELLDVNWHP 303 (405)
T ss_pred CccCCcChhHHHHHHHhhhhhhheeecCCcc--------EEEeccccceeEEEEecCCcceeeeecCCchhheeeccccc
Confidence 11 111111 111234567777664 444444566789999999999999998877 5678899999
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 010759 441 TGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~ 460 (502)
-...|++- ..|.|+||...
T Consensus 304 ~rp~i~si-~sg~v~iw~~~ 322 (405)
T KOG1273|consen 304 VRPIIASI-ASGVVYIWAVV 322 (405)
T ss_pred ceeeeeec-cCCceEEEEee
Confidence 98888887 67899999864
No 150
>KOG0302 consensus Ribosome Assembly protein [General function prediction only]
Probab=99.90 E-value=1.4e-22 Score=182.18 Aligned_cols=219 Identities=25% Similarity=0.454 Sum_probs=169.1
Q ss_pred eecCCCCCEEEEEecCCC--CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC
Q 010759 249 TLSKHKGPIFSLKWNKKG--DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE 326 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~--~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 326 (502)
....|.+.+..++-.+.+ .+.++-+..|.|.|||+...-. .+. ..+.. .....
T Consensus 146 ~~i~h~g~~NRvr~~~~~~~~~~aswse~G~V~Vw~l~~~l~--~l~---------------------~~~~~--~~~s~ 200 (440)
T KOG0302|consen 146 KSIPHYGGINRVRVSRLGNEVLCASWSENGRVQVWDLAPHLN--ALS---------------------EPGLE--VKDSE 200 (440)
T ss_pred cccccccccceeeecccCCcceeeeecccCcEEEEEchhhhh--hhc---------------------Ccccc--ccccc
Confidence 345677777777776655 4556667789999999854310 000 00000 00134
Q ss_pred CcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcee---eecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 327 NRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYV---HDLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 327 ~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~---~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
.+|+.++.+|.+.=.+++|||-.. .++||.--+.|++|...++... ..|.+|...|-.++|||... .+
T Consensus 201 ~~Pl~t~~ghk~EGy~LdWSp~~~g~LlsGDc~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~--------~v 272 (440)
T KOG0302|consen 201 FRPLFTFNGHKGEGYGLDWSPIKTGRLLSGDCVKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTED--------GV 272 (440)
T ss_pred cCceEEecccCccceeeecccccccccccCccccceEeeeeccCceeecCccccccccchhhhccCCccC--------ce
Confidence 678899999999999999999432 3678888889999998877654 34567999999999999865 38
Q ss_pred EEEEeCCCeEEEEeCCCC---eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC---CeeEEEEec-CCCEE
Q 010759 403 LASASFDSTVKLWDVELG---KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE---GKIVKTYTG-NGGIF 475 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~---~~~~~~~~~-~~~i~ 475 (502)
|+|||.||+|+|||++.+ .++.+ ++|..-|+.|+|+..-.+||+|+.||+++|||++. ++.+.+|.. ...|+
T Consensus 273 faScS~DgsIrIWDiRs~~~~~~~~~-kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pIt 351 (440)
T KOG0302|consen 273 FASCSCDGSIRIWDIRSGPKKAAVST-KAHNSDVNVISWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPIT 351 (440)
T ss_pred EEeeecCceEEEEEecCCCccceeEe-eccCCceeeEEccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCee
Confidence 999999999999999987 34444 88999999999999988999999999999999986 455677764 56799
Q ss_pred EEEECCC-CCEEEEEECCCeEEEEEee
Q 010759 476 EVCWNKE-GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 476 ~~~ws~~-g~~la~~~~~~~v~v~~~~ 501 (502)
++.|+|. ...||+++.|.+|++||+.
T Consensus 352 sieW~p~e~s~iaasg~D~QitiWDls 378 (440)
T KOG0302|consen 352 SIEWHPHEDSVIAASGEDNQITIWDLS 378 (440)
T ss_pred EEEeccccCceEEeccCCCcEEEEEee
Confidence 9999995 5688889999999999985
No 151
>KOG0639 consensus Transducin-like enhancer of split protein (contains WD40 repeats) [Chromatin structure and dynamics]
Probab=99.90 E-value=5.2e-23 Score=191.03 Aligned_cols=236 Identities=21% Similarity=0.384 Sum_probs=196.0
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
-|++|.++|||+.|++||.-.++-|||+...... ++..........++++.+||.++++++..||
T Consensus 467 yiRSckL~pdgrtLivGGeastlsiWDLAapTpr---------------ikaeltssapaCyALa~spDakvcFsccsdG 531 (705)
T KOG0639|consen 467 YIRSCKLLPDGRTLIVGGEASTLSIWDLAAPTPR---------------IKAELTSSAPACYALAISPDAKVCFSCCSDG 531 (705)
T ss_pred ceeeeEecCCCceEEeccccceeeeeeccCCCcc---------------hhhhcCCcchhhhhhhcCCccceeeeeccCC
Confidence 3688899999999999999999999999765321 1112222223467789999999999999999
Q ss_pred cEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEc
Q 010759 236 QARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSS 314 (502)
Q Consensus 236 ~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (502)
+|.|||+..+ ++..|.+|+..+.||..+++|..|-||+-|.+||.||++++...++..+
T Consensus 532 nI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF-------------------- 591 (705)
T KOG0639|consen 532 NIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDF-------------------- 591 (705)
T ss_pred cEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhhhhh--------------------
Confidence 9999998754 5668999999999999999999999999999999999998754332221
Q ss_pred CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCC
Q 010759 315 TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT 394 (502)
Q Consensus 315 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~ 394 (502)
.+.|.++.+.|++.+|+.|=.++.+.|-... +...+.+..|...|.++.|++.|.
T Consensus 592 ----------------------~SQIfSLg~cP~~dWlavGMens~vevlh~s-kp~kyqlhlheScVLSlKFa~cGk-- 646 (705)
T KOG0639|consen 592 ----------------------SSQIFSLGYCPTGDWLAVGMENSNVEVLHTS-KPEKYQLHLHESCVLSLKFAYCGK-- 646 (705)
T ss_pred ----------------------hhhheecccCCCccceeeecccCcEEEEecC-CccceeecccccEEEEEEecccCc--
Confidence 3457788899999999999999998887654 333455667889999999999997
Q ss_pred CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 395 NNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 395 ~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
++++.+.|+.+..|..--|..++..+ -..+|.+...|.|.+||+|||.|....||.+
T Consensus 647 -------wfvStGkDnlLnawrtPyGasiFqsk-E~SsVlsCDIS~ddkyIVTGSGdkkATVYeV 703 (705)
T KOG0639|consen 647 -------WFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISFDDKYIVTGSGDKKATVYEV 703 (705)
T ss_pred -------eeeecCchhhhhhccCccccceeecc-ccCcceeeeeccCceEEEecCCCcceEEEEE
Confidence 78899999999999999898888877 4578999999999999999999998888865
No 152
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.90 E-value=6.9e-22 Score=181.95 Aligned_cols=279 Identities=19% Similarity=0.305 Sum_probs=205.8
Q ss_pred cCCCCeEEEEECCCC--CEEEEEECCCcEEEEECCC-----ceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEe
Q 010759 211 EKSKDVTTLDWNGEG--TLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWD 282 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~--~~l~sg~~dg~i~iw~~~~-----~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd 282 (502)
.+...|++++|+|.. +++++|..-|+|-+||+.+ .-...+..|..+|.++.|+|.+ ..+++.|.||+|++-|
T Consensus 184 v~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~d~v~~f~~hs~~Vs~l~F~P~n~s~i~ssSyDGtiR~~D 263 (498)
T KOG4328|consen 184 VTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDKDGVYLFTPHSGPVSGLKFSPANTSQIYSSSYDGTIRLQD 263 (498)
T ss_pred ecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCccCceEEeccCCccccceEecCCChhheeeeccCceeeeee
Confidence 346789999999954 5888999999999999842 2345678899999999999966 5799999999999999
Q ss_pred ccCcceeEEeee--cccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcc-eeeecCCCcceeEEEEcCCCC-EEEEEeC
Q 010759 283 VKTEEWKQQFEF--HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTGS-LLASCSD 357 (502)
Q Consensus 283 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~-~l~sgs~ 357 (502)
+.+......+.. ...-...+++.. +..++.+..=|...+||++.+.. ...+.-|...|+.|+++|... +|||||.
T Consensus 264 ~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~ 343 (498)
T KOG4328|consen 264 FEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASL 343 (498)
T ss_pred ecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeeccc
Confidence 987653333322 112233444432 33344444445788899887654 445566888999999999764 6899999
Q ss_pred CCcEEEEeCCCCce----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC----CCeEEEEeeCC
Q 010759 358 DVTAKIWNMKQDKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE----LGKLLYSLNGH 429 (502)
Q Consensus 358 dg~i~iwd~~~~~~----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~----~~~~~~~~~~h 429 (502)
|++++|||++.-.. +-....|...|.+..|||.+. -|++.+.|+.|||||.. ...++.++. |
T Consensus 344 D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~g---------tl~TT~~D~~IRv~dss~~sa~~~p~~~I~-H 413 (498)
T KOG4328|consen 344 DQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGG---------TLLTTCQDNEIRVFDSSCISAKDEPLGTIP-H 413 (498)
T ss_pred CcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCC---------ceEeeccCCceEEeecccccccCCccceee-c
Confidence 99999999975322 233446889999999999985 37888999999999983 233333332 2
Q ss_pred C----C--CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC--CEEE-EEECCCCC-EEEEEECCCeEEEEE
Q 010759 430 R----E--PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG--GIFE-VCWNKEGD-KIAACFANHTVCVLD 499 (502)
Q Consensus 430 ~----~--~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~--~i~~-~~ws~~g~-~la~~~~~~~v~v~~ 499 (502)
. . ......|.|+..++++|-.-..|-|||-..++++..+.... .|.+ ..|+|-+. .+|.+...|.|+||-
T Consensus 414 n~~t~RwlT~fKA~W~P~~~li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~~~~~aG~~s~Gki~vft 493 (498)
T KOG4328|consen 414 NNRTGRWLTPFKAAWDPDYNLIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMRDTLAAGGNSSGKIYVFT 493 (498)
T ss_pred cCcccccccchhheeCCCccEEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccccceeccCCccceEEEEe
Confidence 2 1 23456899999999999999999999999998777754322 3433 56999988 555556678888884
No 153
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.90 E-value=1.1e-21 Score=178.23 Aligned_cols=314 Identities=18% Similarity=0.354 Sum_probs=191.1
Q ss_pred ccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 154 TSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
..+|..+.|.++.. .|||||.|..|+||.+..+...++. ..+.. ......|...|+++.|+|+|.+|+||+
T Consensus 13 ~~pv~s~dfq~n~~~~laT~G~D~~iriW~v~r~~~~~~~----~~V~y----~s~Ls~H~~aVN~vRf~p~gelLASg~ 84 (434)
T KOG1009|consen 13 HEPVYSVDFQKNSLNKLATAGGDKDIRIWKVNRSEPGGGD----MKVEY----LSSLSRHTRAVNVVRFSPDGELLASGG 84 (434)
T ss_pred CCceEEEEeccCcccceecccCccceeeeeeeecCCCCCc----eeEEE----eecccCCcceeEEEEEcCCcCeeeecC
Confidence 35799999999866 9999999999999998765432211 12222 223345688999999999999999999
Q ss_pred CCCcEEEEECC--------C-----c----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 233 YDGQARIWSTN--------G-----D----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 233 ~dg~i~iw~~~--------~-----~----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
.+|.|.+|... . . ....+.+|...|+.++|+|++.++++|+.|.++++||+..+.....+..|
T Consensus 85 D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh 164 (434)
T KOG1009|consen 85 DGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDH 164 (434)
T ss_pred CCceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeeeeeccceEEEEEeccceeEeecccc
Confidence 99999999754 1 1 23467789999999999999999999999999999999998877666655
Q ss_pred ccCeEEEecCCCceE-EEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC---cEEEEeCCCCce
Q 010759 296 SGPTLDVDWRNNVSF-ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV---TAKIWNMKQDKY 371 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~-~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg---~i~iwd~~~~~~ 371 (502)
...+..+.|..-..+ ++-+.|...+...+.. ...+.++.. ..+.+-.+..+ ..++|--++.+
T Consensus 165 ~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~----------~~~~~~~~~---~~m~~~~~~~~e~~s~rLfhDeTlk- 230 (434)
T KOG1009|consen 165 EHYVQGVAWDPLNQYVASKSSDRHPEGFSAKL----------KQVIKRHGL---DIMPAKAFNEREGKSTRLFHDETLK- 230 (434)
T ss_pred ccccceeecchhhhhhhhhccCcccceeeeee----------eeeeeeeee---eEeeecccCCCCcceeeeeecCchh-
Confidence 555555555433222 2223333222211110 001111111 00111111111 12222111111
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-C-CCeEEEEeCC-CCeEEEEeeCCCCCEEEEEECC--------
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS-F-DSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSP-------- 440 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~-dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~sp-------- 440 (502)
.-...++|+|+|.....|.... -+|. . -++.++++-. ..++...+.+-..++..+.|+|
T Consensus 231 --------sFFrRlsfTPdG~llvtPag~~--~~g~~~~~n~tYvfsrk~l~rP~~~lp~~~k~~lavr~~pVy~elrp~ 300 (434)
T KOG1009|consen 231 --------SFFRRLSFTPDGSLLVTPAGLF--KVGGGVFRNTSYVFSRKDLKRPAARLPSPKKPALAVRFSPVYYELRPL 300 (434)
T ss_pred --------hhhhhcccCCCCcEEEccccee--eeCCceeeceeEeeccccccCceeecCCCCcceEEEEeeeeEEEeccc
Confidence 1124567888886222221100 0000 0 1223344322 1234455555556666666654
Q ss_pred ----------CCCEEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 441 ----------TGEYLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 441 ----------dg~~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
-+-.+|.++.+ .|.|||..+-..+.... +-..|++++|++||..|+..+.||.+.+..|
T Consensus 301 ~~~~~~~~lpyrlvfaiAt~~-svyvydtq~~~P~~~v~nihy~~iTDiaws~dg~~l~vSS~DGyCS~vtf 371 (434)
T KOG1009|consen 301 SSEKFLFVLPYRLVFAIATKN-SVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDGSVLLVSSTDGFCSLVTF 371 (434)
T ss_pred cccccccccccceEEEEeecc-eEEEeccccccceEEEeeeeeeeecceeecCCCcEEEEeccCCceEEEEE
Confidence 22345556654 69999998766554443 3457999999999999999999998877655
No 154
>KOG4328 consensus WD40 protein [Function unknown]
Probab=99.89 E-value=2.7e-21 Score=178.07 Aligned_cols=290 Identities=18% Similarity=0.318 Sum_probs=212.7
Q ss_pred eeccccccceeEEEECCCC--CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-C
Q 010759 148 TILEGHTSEVCACAWSPAG--SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-E 224 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~--~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~ 224 (502)
.+.+-|..+|++++|+|.. +++|+|..-|.|-+||+.+..... -.+ -....|+.+|.+|.|+| +
T Consensus 180 ~v~kv~~~Rit~l~fHPt~~~~lva~GdK~G~VG~Wn~~~~~~d~------d~v-------~~f~~hs~~Vs~l~F~P~n 246 (498)
T KOG4328|consen 180 NVAKVTDRRITSLAFHPTENRKLVAVGDKGGQVGLWNFGTQEKDK------DGV-------YLFTPHSGPVSGLKFSPAN 246 (498)
T ss_pred ceeEecccceEEEEecccCcceEEEEccCCCcEEEEecCCCCCcc------Cce-------EEeccCCccccceEecCCC
Confidence 3556788999999999974 588999999999999995221110 000 01235788999999999 4
Q ss_pred CCEEEEEECCCcEEEEECCCceeE---eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcce-eEEeeecccCeE
Q 010759 225 GTLLATGSYDGQARIWSTNGDLKC---TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-KQQFEFHSGPTL 300 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~~~---~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~~ 300 (502)
-..+++.++||+|++-|+++.... .+..-.....++.|+.+...++.+..=|...+||+++..- ...+..|...|.
T Consensus 247 ~s~i~ssSyDGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R~~~s~~~~~~lh~kKI~ 326 (498)
T KOG4328|consen 247 TSQIYSSSYDGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLRTDGSEYENLRLHKKKIT 326 (498)
T ss_pred hhheeeeccCceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEeecCCccchhhhhhhcccc
Confidence 578999999999999998765432 2222334567788888888888888878999999988653 455667777787
Q ss_pred EEecC--CCceEEEEcCCCeEEEEEcCCCc----ceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC----CCc
Q 010759 301 DVDWR--NNVSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK----QDK 370 (502)
Q Consensus 301 ~~~~~--~~~~~~~~~~d~~i~~~~~~~~~----~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~----~~~ 370 (502)
.+++. ....+++++.|++.++||++.-. |+.....|...|.++.|||++..|+|.+.|..|+|||.. ...
T Consensus 327 sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~ 406 (498)
T KOG4328|consen 327 SVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDE 406 (498)
T ss_pred eeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCC
Confidence 77765 45678999999999999987522 344556799999999999998889999999999999973 222
Q ss_pred eeeecccCC------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCEEE-EEECCCC
Q 010759 371 YVHDLREHS------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYS-LAFSPTG 442 (502)
Q Consensus 371 ~~~~~~~~~------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~-l~~spdg 442 (502)
+...+. |. -......|.|+.. +++.|-.-..|-|+|-..++.+..+..- ...|.+ ..|+|-+
T Consensus 407 p~~~I~-Hn~~t~RwlT~fKA~W~P~~~---------li~vg~~~r~IDv~~~~~~q~v~el~~P~~~tI~~vn~~HP~~ 476 (498)
T KOG4328|consen 407 PLGTIP-HNNRTGRWLTPFKAAWDPDYN---------LIVVGRYPRPIDVFDGNGGQMVCELHDPESSTIPSVNEFHPMR 476 (498)
T ss_pred ccceee-ccCcccccccchhheeCCCcc---------EEEEeccCcceeEEcCCCCEEeeeccCccccccccceeecccc
Confidence 222221 21 1234457877653 8889988889999999999888775433 235655 4899998
Q ss_pred CEEEE-EeCCCcEEEEeCC
Q 010759 443 EYLAS-GSLDKSMHIWSLK 460 (502)
Q Consensus 443 ~~las-gs~Dg~i~iw~~~ 460 (502)
..+++ ++.-|.|+||.-+
T Consensus 477 ~~~~aG~~s~Gki~vft~k 495 (498)
T KOG4328|consen 477 DTLAAGGNSSGKIYVFTNK 495 (498)
T ss_pred cceeccCCccceEEEEecC
Confidence 85555 4567888888654
No 155
>COG2319 FOG: WD40 repeat [General function prediction only]
Probab=99.89 E-value=4.8e-19 Score=176.71 Aligned_cols=327 Identities=29% Similarity=0.573 Sum_probs=251.3
Q ss_pred eeeccccc-cceeEEEE-CCCCC-EEEEEeC-CCcEEEEecCC-CCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 147 VTILEGHT-SEVCACAW-SPAGS-LLASGSG-DSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 147 ~~~l~~H~-~~V~~~~~-spd~~-~l~sgs~-D~~i~iW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+..+.++. ..+..+.+ ++++. +++..+. |+.+++|++.. .. .. .....|...|..++|
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~-------------~~----~~~~~~~~~v~~~~~ 163 (466)
T COG2319 101 IKSLEGLHDSSVSKLALSSPDGNSILLASSSLDGTVKLWDLSTPGK-------------LI----RTLEGHSESVTSLAF 163 (466)
T ss_pred EEEEeccCCCceeeEEEECCCcceEEeccCCCCccEEEEEecCCCe-------------EE----EEEecCcccEEEEEE
Confidence 45555544 36777777 88887 5555454 99999999865 11 11 112235677899999
Q ss_pred CCCCCEEEEEEC-CCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeE-Eeeeccc
Q 010759 222 NGEGTLLATGSY-DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQ-QFEFHSG 297 (502)
Q Consensus 222 s~~~~~l~sg~~-dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~-~~~~~~~ 297 (502)
+|++.++++++. |+.+++|+... .....+.+|...|.+++|+|++. .+++++.|++|++||...+.... .+..|..
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~~~~~~~~~~~~~ 243 (466)
T COG2319 164 SPDGKLLASGSSLDGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTGKLLRSTLSGHSD 243 (466)
T ss_pred CCCCCEEEecCCCCCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCCcEEeeecCCCCc
Confidence 999999999886 99999999874 56667788999999999999998 55666999999999988777777 5776766
Q ss_pred CeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcc-eeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 298 PTLDVDWRNN-VSFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 298 ~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
.. ...|... ..+++++.++.+++|+...... +..+.+|...+.++.|+|++..+++++.|+.+++|+..+.......
T Consensus 244 ~~-~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 322 (466)
T COG2319 244 SV-VSSFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSL 322 (466)
T ss_pred ce-eEeECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEe
Confidence 54 2245443 4677899999999999987664 4455688899999999998888888999999999999888766665
Q ss_pred c--cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE-EeCCC
Q 010759 376 R--EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS-GSLDK 452 (502)
Q Consensus 376 ~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las-gs~Dg 452 (502)
. .|...+..+.| +.. ...++.++..|+.+++|++............ ..+..+.+++ ...++. ++.++
T Consensus 323 ~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~ 392 (466)
T COG2319 323 TLKGHEGPVSSLSF-SPD-------GSLLVSGGSDDGTIRLWDLRTGKPLKTLEGH-SNVLSVSFSP-DGRVVSSGSTDG 392 (466)
T ss_pred eecccCCceEEEEE-CCC-------CCEEEEeecCCCcEEeeecCCCceeEEecCC-ceEEEEEECC-CCCEEEEecCCC
Confidence 5 67777889988 422 0124444468899999999877733333322 2389999999 544444 78899
Q ss_pred cEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 453 SMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 453 ~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+.+|+............. ..+..+.+++++..++.+..++.+.+|++.
T Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (466)
T COG2319 393 TVRLWDLSTGSLLRNLDGHTSRVTSLDFSPDGKSLASGSSDNTIRLWDLK 442 (466)
T ss_pred ceEEEecccCeeeeeccCCCCcEEEEEECCCCcEEEEecCCCcEEEEecc
Confidence 9999999988877776665 789999999999999999999999999864
No 156
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=2e-21 Score=185.65 Aligned_cols=267 Identities=23% Similarity=0.334 Sum_probs=196.0
Q ss_pred CCEEEEEECCCcEEEEECCCce-------eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE--eeec
Q 010759 225 GTLLATGSYDGQARIWSTNGDL-------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ--FEFH 295 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~-------~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~--~~~~ 295 (502)
...|+.+..||.|.++|..... ......|.++|+.++|-|....|++++.|.++++||+.+..+... +.+|
T Consensus 64 eHiLavadE~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l~G~~~~~GH 143 (720)
T KOG0321|consen 64 EHILAVADEDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRLVGGRLNLGH 143 (720)
T ss_pred cceEEEecCCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeeccceeecceeeccc
Confidence 4578999999999999975321 234567999999999999767899999999999999999988776 8889
Q ss_pred ccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCc--------------------cee-------eecCCCcceeE---E
Q 010759 296 SGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENR--------------------PIK-------TFAGHQGEVNC---V 343 (502)
Q Consensus 296 ~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~--------------------~~~-------~~~~h~~~v~~---v 343 (502)
.+.+.++.|. +...|++++.|+.|.+||++... +.+ ....|.+.|.+ +
T Consensus 144 ~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTv 223 (720)
T KOG0321|consen 144 TGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTV 223 (720)
T ss_pred ccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEE
Confidence 9988888774 66789999999999999986433 111 11233444544 5
Q ss_pred EEcCCCCEEEEEeC-CCcEEEEeCCCCceeee--------cccC---CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe
Q 010759 344 KWDPTGSLLASCSD-DVTAKIWNMKQDKYVHD--------LREH---SKEIYTIRWSPTGSGTNNPNQQLILASASFDST 411 (502)
Q Consensus 344 ~~~p~~~~l~sgs~-dg~i~iwd~~~~~~~~~--------~~~~---~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~ 411 (502)
-+..|...||+++. |+.|+|||++....... +..| .-.+.++.....|. +++|+|. |++
T Consensus 224 v~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDssGt--------~L~AsCt-D~s 294 (720)
T KOG0321|consen 224 VLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDSSGT--------YLFASCT-DNS 294 (720)
T ss_pred EEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecCCCC--------eEEEEec-CCc
Confidence 56678899999998 99999999987543321 1112 11234444444443 3555555 999
Q ss_pred EEEEeCCCC--eEEEEeeCCCCC--EEEEEECCCCCEEEEEeCCCcEEEEeCCCCee-EEEEecCC-CEEEEEECCCC-C
Q 010759 412 VKLWDVELG--KLLYSLNGHREP--VYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI-VKTYTGNG-GIFEVCWNKEG-D 484 (502)
Q Consensus 412 i~iwd~~~~--~~~~~~~~h~~~--v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~-~~~~~~~~-~i~~~~ws~~g-~ 484 (502)
|++|++..- .+++.+.++... -..-..+|++.+|++|+.|...++|.+.+-.. ...+.++. .|+.++|.|.- .
T Consensus 295 Iy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~~l~SgSsd~~ayiw~vs~~e~~~~~l~Ght~eVt~V~w~pS~~t 374 (720)
T KOG0321|consen 295 IYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDCSLLSGSSDEQAYIWVVSSPEAPPALLLGHTREVTTVRWLPSATT 374 (720)
T ss_pred EEEEeccccCcCchhhccCcccceeeeeeecCCCCceEeccCCCcceeeeeecCccCChhhhhCcceEEEEEeeccccCC
Confidence 999999753 345555555321 11224689999999999999999999987654 33444544 48999999954 5
Q ss_pred EEEEEECCCeEEEEEe
Q 010759 485 KIAACFANHTVCVLDF 500 (502)
Q Consensus 485 ~la~~~~~~~v~v~~~ 500 (502)
-+|+|+.|.++.||++
T Consensus 375 ~v~TcSdD~~~kiW~l 390 (720)
T KOG0321|consen 375 PVATCSDDFRVKIWRL 390 (720)
T ss_pred CceeeccCcceEEEec
Confidence 7888899999999986
No 157
>KOG0321 consensus WD40 repeat-containing protein L2DTL [Function unknown]
Probab=99.89 E-value=1.4e-21 Score=186.64 Aligned_cols=285 Identities=21% Similarity=0.299 Sum_probs=201.0
Q ss_pred eEEEECCC---CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 158 CACAWSPA---GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 158 ~~~~~spd---~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
+++.|++- .+.||.+-.||.|.++|........ ....++ ....|...|..+.|-|....|++++.|
T Consensus 53 f~~sFs~~~n~eHiLavadE~G~i~l~dt~~~~fr~-------ee~~lk----~~~aH~nAifDl~wapge~~lVsasGD 121 (720)
T KOG0321|consen 53 FADSFSAAPNKEHILAVADEDGGIILFDTKSIVFRL-------EERQLK----KPLAHKNAIFDLKWAPGESLLVSASGD 121 (720)
T ss_pred ccccccCCCCccceEEEecCCCceeeecchhhhcch-------hhhhhc----ccccccceeEeeccCCCceeEEEccCC
Confidence 44667653 4689999999999999975432110 000011 123466789999999977789999999
Q ss_pred CcEEEEECCCc-eeE--eecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcce-------eEEeeec--------
Q 010759 235 GQARIWSTNGD-LKC--TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEW-------KQQFEFH-------- 295 (502)
Q Consensus 235 g~i~iw~~~~~-~~~--~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~-------~~~~~~~-------- 295 (502)
.++++||+.+. +.. .+.+|.+.|.+++|.|.. ..|++|+.||.|.|||++-... ...+..|
T Consensus 122 sT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~n~~d~~e~~~~~~~~~~n~~ptpsk 201 (720)
T KOG0321|consen 122 STIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRCNGVDALEEFDNRIYGRHNTAPTPSK 201 (720)
T ss_pred ceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEeccchhhHHHHhhhhhccccCCCCCCc
Confidence 99999998753 222 478999999999999976 4689999999999999864320 0111111
Q ss_pred ------------c----cCeEEEecCCCceEEEEcC-CCeEEEEEcCCCcce--------eeecCC---CcceeEEEEcC
Q 010759 296 ------------S----GPTLDVDWRNNVSFATSST-DNMIYVCKIGENRPI--------KTFAGH---QGEVNCVKWDP 347 (502)
Q Consensus 296 ------------~----~~~~~~~~~~~~~~~~~~~-d~~i~~~~~~~~~~~--------~~~~~h---~~~v~~v~~~p 347 (502)
. +.|..+-|.++..+++++. |+.|+|||++..... ..+.-| ...+.++....
T Consensus 202 p~~kr~~k~kA~s~ti~ssvTvv~fkDe~tlaSaga~D~~iKVWDLRk~~~~~r~ep~~~~~~~t~skrs~G~~nL~lDs 281 (720)
T KOG0321|consen 202 PLKKRIRKWKAASNTIFSSVTVVLFKDESTLASAGAADSTIKVWDLRKNYTAYRQEPRGSDKYPTHSKRSVGQVNLILDS 281 (720)
T ss_pred hhhccccccccccCceeeeeEEEEEeccceeeeccCCCcceEEEeecccccccccCCCcccCccCcccceeeeEEEEecC
Confidence 1 1234456678888888876 999999999865432 122223 23467777777
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCc--eeeecccCCCcEE--EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-
Q 010759 348 TGSLLASCSDDVTAKIWNMKQDK--YVHDLREHSKEIY--TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL- 422 (502)
Q Consensus 348 ~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~~~~~i~--~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~- 422 (502)
.|.++++.+.|+.|.+|++.+.. ++..+.++...-. .-..+|++. +|++|+.|...++|.+.+.+.
T Consensus 282 sGt~L~AsCtD~sIy~ynm~s~s~sP~~~~sg~~~~sf~vks~lSpd~~---------~l~SgSsd~~ayiw~vs~~e~~ 352 (720)
T KOG0321|consen 282 SGTYLFASCTDNSIYFYNMRSLSISPVAEFSGKLNSSFYVKSELSPDDC---------SLLSGSSDEQAYIWVVSSPEAP 352 (720)
T ss_pred CCCeEEEEecCCcEEEEeccccCcCchhhccCcccceeeeeeecCCCCc---------eEeccCCCcceeeeeecCccCC
Confidence 88887776779999999987543 2333333322111 113456664 789999999999999987653
Q ss_pred EEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCC
Q 010759 423 LYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 423 ~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~ 462 (502)
+..+.+|...|++++|.|.. .-+||+++|.+++||++..+
T Consensus 353 ~~~l~Ght~eVt~V~w~pS~~t~v~TcSdD~~~kiW~l~~~ 393 (720)
T KOG0321|consen 353 PALLLGHTREVTTVRWLPSATTPVATCSDDFRVKIWRLSNG 393 (720)
T ss_pred hhhhhCcceEEEEEeeccccCCCceeeccCcceEEEeccCc
Confidence 45678999999999998864 45677799999999998654
No 158
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.89 E-value=2.3e-22 Score=172.65 Aligned_cols=287 Identities=17% Similarity=0.244 Sum_probs=199.0
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+|+.++.+|++|.+.|+++.|-.+++ |++|..-|.|++|++++...... ++ ..+...|+.+.-
T Consensus 2 ~pPdP~fvLRp~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~-------------~r---~~g~~~it~lq~ 64 (323)
T KOG0322|consen 2 VPPDPFFVLRPHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPL-------------IR---LFGRLFITNLQS 64 (323)
T ss_pred CCCCCeeEeccccchheehhhccchh-hhcccccceEEEEEeecCccchh-------------hh---hhccceeeceee
Confidence 46778899999999999999988776 88999999999999987543211 11 023456777777
Q ss_pred CCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCC-eEEEEecc---------CcceeEE
Q 010759 222 NGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK-TAIVWDVK---------TEEWKQQ 291 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~-~v~iwd~~---------~~~~~~~ 291 (502)
-|+ ..|.+-+.|+.+.+|+...... +.-|.-.+.++.|.+.. +...+... ..-.++-+ .+...+.
T Consensus 65 ~p~-d~l~tqgRd~~L~lw~ia~s~~--i~i~Si~~nslgFCrfS--l~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv 139 (323)
T KOG0322|consen 65 IPN-DSLDTQGRDPLLILWTIAYSAF--ISIHSIVVNSLGFCRFS--LVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQV 139 (323)
T ss_pred cCC-cchhhcCCCceEEEEEccCcce--EEEeeeeccccccccce--eccCCCcchhheecCCcccchhhhhccCcccee
Confidence 776 5677889999999999865322 22233444455444321 11111111 11111110 0111111
Q ss_pred --e----eecccCeEEEecC--C--CceEEEEcCCCeEEEEEcCCC----------cceeeecCCCcceeEEEEcCCCCE
Q 010759 292 --F----EFHSGPTLDVDWR--N--NVSFATSSTDNMIYVCKIGEN----------RPIKTFAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 292 --~----~~~~~~~~~~~~~--~--~~~~~~~~~d~~i~~~~~~~~----------~~~~~~~~h~~~v~~v~~~p~~~~ 351 (502)
. ....+.+++.++. . ...++++-.++.+.+|++..+ +.+..+..|..+|.++.|.+.-..
T Consensus 140 ~i~dd~~~~Klgsvmc~~~~~~c~s~~lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~r 219 (323)
T KOG0322|consen 140 QIADDSERSKLGSVMCQDKDHACGSTFLLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDR 219 (323)
T ss_pred EccCchhccccCceeeeeccccccceEEEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcC
Confidence 0 1123455666543 2 234567778999999999886 334445678999999999876666
Q ss_pred EEEEeCCCcEEEEeCCCC--ce-e-eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee
Q 010759 352 LASCSDDVTAKIWNMKQD--KY-V-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~--~~-~-~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 427 (502)
=++|+.+..+..|++... .+ + .++......+..+...|+++ ++||+++|+.||+|..++.+++..++
T Consensus 220 Gisgga~dkl~~~Sl~~s~gslq~~~e~~lknpGv~gvrIRpD~K---------IlATAGWD~RiRVyswrtl~pLAVLk 290 (323)
T KOG0322|consen 220 GISGGADDKLVMYSLNHSTGSLQIRKEITLKNPGVSGVRIRPDGK---------ILATAGWDHRIRVYSWRTLNPLAVLK 290 (323)
T ss_pred CcCCCccccceeeeeccccCcccccceEEecCCCccceEEccCCc---------EEeecccCCcEEEEEeccCCchhhhh
Confidence 678888889999987643 11 1 11222334567778888886 89999999999999999999999999
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
-|++.|++++|+|+...+|+||.|++|-+|++
T Consensus 291 yHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 291 YHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred hhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 99999999999999999999999999999986
No 159
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.89 E-value=1.7e-22 Score=205.24 Aligned_cols=242 Identities=21% Similarity=0.453 Sum_probs=198.0
Q ss_pred CCeEEEEECCCCCE----EEEEECCCcEEEEECCC-------ceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEE
Q 010759 214 KDVTTLDWNGEGTL----LATGSYDGQARIWSTNG-------DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVW 281 (502)
Q Consensus 214 ~~V~~l~~s~~~~~----l~sg~~dg~i~iw~~~~-------~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iw 281 (502)
..-+.|+|.+.|.. ++.|..||.|-+|+... ..+.++..|+++|.+|.|++... .|++|+.||.|.||
T Consensus 65 ~rF~kL~W~~~g~~~~GlIaGG~edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iW 144 (1049)
T KOG0307|consen 65 NRFNKLAWGSYGSHSHGLIAGGLEDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIW 144 (1049)
T ss_pred ccceeeeecccCCCccceeeccccCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEe
Confidence 34678999987765 88899999999999643 23456788999999999999765 89999999999999
Q ss_pred eccCcceeEEee--ecccCeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcceeeecCCCc--ceeEEEEcCCC-CEEEE
Q 010759 282 DVKTEEWKQQFE--FHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQG--EVNCVKWDPTG-SLLAS 354 (502)
Q Consensus 282 d~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~-~~l~s 354 (502)
|+..-+.--.+. .....|.++.|... ..|++++.++.+.+||++..+++..+..|.+ .+..+.|||++ ..|++
T Consensus 145 Dlnn~~tP~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~ 224 (1049)
T KOG0307|consen 145 DLNKPETPFTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLV 224 (1049)
T ss_pred ccCCcCCCCCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeee
Confidence 998744332221 12345788889654 4577888999999999999999888876655 46789999987 45666
Q ss_pred EeCCC---cEEEEeCCCC-ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC
Q 010759 355 CSDDV---TAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR 430 (502)
Q Consensus 355 gs~dg---~i~iwd~~~~-~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~ 430 (502)
++.|. .|.+||++.- ..++.++.|...|.++.|++.+. .+|+|++.|+.|.+|+..+++.+..+....
T Consensus 225 As~dd~~PviqlWDlR~assP~k~~~~H~~GilslsWc~~D~--------~lllSsgkD~~ii~wN~~tgEvl~~~p~~~ 296 (1049)
T KOG0307|consen 225 ASGDDSAPVIQLWDLRFASSPLKILEGHQRGILSLSWCPQDP--------RLLLSSGKDNRIICWNPNTGEVLGELPAQG 296 (1049)
T ss_pred ecCCCCCceeEeecccccCCchhhhcccccceeeeccCCCCc--------hhhhcccCCCCeeEecCCCceEeeecCCCC
Confidence 66654 5899998753 45677889999999999999874 378999999999999999999999998888
Q ss_pred CCEEEEEECCCCC-EEEEEeCCCcEEEEeCCCCe
Q 010759 431 EPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 431 ~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~~ 463 (502)
.++..+.|.|... .+++++.||.|-||.+..+.
T Consensus 297 nW~fdv~w~pr~P~~~A~asfdgkI~I~sl~~~~ 330 (1049)
T KOG0307|consen 297 NWCFDVQWCPRNPSVMAAASFDGKISIYSLQGTD 330 (1049)
T ss_pred cceeeeeecCCCcchhhhheeccceeeeeeecCC
Confidence 8999999999876 78889999999999987654
No 160
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.89 E-value=3.1e-21 Score=184.92 Aligned_cols=275 Identities=19% Similarity=0.310 Sum_probs=206.4
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
.|+.++|-|||..|+.+. +..+.+||..+|... ..+ .+|...|.|++|+.||+.|+||+.|.
T Consensus 14 ci~d~afkPDGsqL~lAA-g~rlliyD~ndG~ll-------------qtL----KgHKDtVycVAys~dGkrFASG~aDK 75 (1081)
T KOG1538|consen 14 CINDIAFKPDGTQLILAA-GSRLLVYDTSDGTLL-------------QPL----KGHKDTVYCVAYAKDGKRFASGSADK 75 (1081)
T ss_pred chheeEECCCCceEEEec-CCEEEEEeCCCcccc-------------ccc----ccccceEEEEEEccCCceeccCCCce
Confidence 799999999998777664 457889999887532 122 34578899999999999999999999
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcC
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSST 315 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (502)
.|.+|+..-+-.. -..|+..|.|+.|+|-.+.|+||+-. ..-+|........
T Consensus 76 ~VI~W~~klEG~L-kYSH~D~IQCMsFNP~~h~LasCsLs-dFglWS~~qK~V~-------------------------- 127 (1081)
T KOG1538|consen 76 SVIIWTSKLEGIL-KYSHNDAIQCMSFNPITHQLASCSLS-DFGLWSPEQKSVS-------------------------- 127 (1081)
T ss_pred eEEEeccccccee-eeccCCeeeEeecCchHHHhhhcchh-hccccChhhhhHH--------------------------
Confidence 9999986422221 23699999999999999999998753 3445644322110
Q ss_pred CCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec---ccCCCcEEEEEEccCCC
Q 010759 316 DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL---REHSKEIYTIRWSPTGS 392 (502)
Q Consensus 316 d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~~~~~i~~~~~sp~g~ 392 (502)
.. .....+.+++|..||++++.|-.+|+|.|-+-. +.....+ -+...+|++++|+|...
T Consensus 128 ----------------K~-kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~-gEek~~I~Rpgg~Nspiwsi~~~p~sg 189 (1081)
T KOG1538|consen 128 ----------------KH-KSSSRIICCSWTNDGQYLALGMFNGTISIRNKN-GEEKVKIERPGGSNSPIWSICWNPSSG 189 (1081)
T ss_pred ----------------hh-hhheeEEEeeecCCCcEEEEeccCceEEeecCC-CCcceEEeCCCCCCCCceEEEecCCCC
Confidence 00 013468899999999999999999999998643 3322222 24678999999999753
Q ss_pred CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cC
Q 010759 393 GTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-GN 471 (502)
Q Consensus 393 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~ 471 (502)
. ...-+++...+..++.++.+. |+.+..-+...-.-.||++-|+|.|+..||.|+.+++|.. +|-.+.+.. ..
T Consensus 190 ~----G~~di~aV~DW~qTLSFy~Ls-G~~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR-~GvrLGTvg~~D 263 (1081)
T KOG1538|consen 190 E----GRNDILAVADWGQTLSFYQLS-GKQIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTR-DGVRLGTVGEQD 263 (1081)
T ss_pred C----CccceEEEEeccceeEEEEec-ceeecccccCCCCchhheeccCCcEEEEccCCCceEEEee-cCeEEeeccccc
Confidence 2 222367888888999988775 5555433333334578999999999999999999999974 566666654 35
Q ss_pred CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 472 GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 472 ~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
..|++++..|.++.++.|..||+|.-||+
T Consensus 264 ~WIWtV~~~PNsQ~v~~GCqDGTiACyNl 292 (1081)
T KOG1538|consen 264 SWIWTVQAKPNSQYVVVGCQDGTIACYNL 292 (1081)
T ss_pred eeEEEEEEccCCceEEEEEccCeeehhhh
Confidence 67999999999999999999999988775
No 161
>KOG0270 consensus WD40 repeat-containing protein [Function unknown]
Probab=99.88 E-value=1.8e-21 Score=178.60 Aligned_cols=249 Identities=22% Similarity=0.418 Sum_probs=177.3
Q ss_pred CCEEEEEeCCCcEEEEecCCCCC-CCCCCCCCceEEEE---EeeecccccCCCCeEEEEECCC-CCEEEEEECCCcEEEE
Q 010759 166 GSLLASGSGDSTARIWTIADGTS-NGGAQNGPLNVLVL---KHVKGRTNEKSKDVTTLDWNGE-GTLLATGSYDGQARIW 240 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~V~~l~~s~~-~~~l~sg~~dg~i~iw 240 (502)
|+|+|.|..|..|.|||+.=-.. .+..+.|....... +.......+|+..|.+|+|+.. ...|+|||.|.+|++|
T Consensus 192 gNyvAiGtmdp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV~lW 271 (463)
T KOG0270|consen 192 GNYVAIGTMDPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTVKLW 271 (463)
T ss_pred cceEEEeccCceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceEEEE
Confidence 57999999999999999852111 11111111000000 0111123367888999999875 4689999999999999
Q ss_pred ECC-CceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCccee-EEeeecccCeEEEec--CCCceEEEEcC
Q 010759 241 STN-GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWK-QQFEFHSGPTLDVDW--RNNVSFATSST 315 (502)
Q Consensus 241 ~~~-~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~--~~~~~~~~~~~ 315 (502)
|+. +.+..++..|.++|.++.|+|.. .+|++||.|++|.+.|.+..... ..+.+ .+.+-.+.| .....|+.+..
T Consensus 272 D~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~-~g~VEkv~w~~~se~~f~~~td 350 (463)
T KOG0270|consen 272 DVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKF-DGEVEKVAWDPHSENSFFVSTD 350 (463)
T ss_pred EcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEe-ccceEEEEecCCCceeEEEecC
Confidence 986 56667788899999999999965 67999999999999999842221 12222 334545555 45567888999
Q ss_pred CCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCce--eeecccCCCcEEEEEEccCC
Q 010759 316 DNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY--VHDLREHSKEIYTIRWSPTG 391 (502)
Q Consensus 316 d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~--~~~~~~~~~~i~~~~~sp~g 391 (502)
||+++-+|++.. +|+.++..|.++|.++++++.- .+++|++.|+.+++|++..... +..-...-+...|.++.|+-
T Consensus 351 dG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d~~Vklw~~~~~~~~~v~~~~~~~~rl~c~~~~~~~ 430 (463)
T KOG0270|consen 351 DGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTDKVVKLWKFDVDSPKSVKEHSFKLGRLHCFALDPDV 430 (463)
T ss_pred CceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeeccccceEEEEeecCCCCcccccccccccceeecccCCCc
Confidence 999999999876 8999999999999999998754 5789999999999999864433 22111112334555555554
Q ss_pred CCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE
Q 010759 392 SGTNNPNQQLILASASFDSTVKLWDVELGKLL 423 (502)
Q Consensus 392 ~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~ 423 (502)
. .+++.|+..+.+++||+.+...+
T Consensus 431 a--------~~la~GG~k~~~~vwd~~~~~~V 454 (463)
T KOG0270|consen 431 A--------FTLAFGGEKAVLRVWDIFTNSPV 454 (463)
T ss_pred c--------eEEEecCccceEEEeecccChhH
Confidence 3 47888998899999999876544
No 162
>KOG0650 consensus WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis [Translation, ribosomal structure and biogenesis]
Probab=99.88 E-value=7.6e-21 Score=180.37 Aligned_cols=280 Identities=22% Similarity=0.356 Sum_probs=211.0
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCE-EEEecCCCeEEEEeccCcc
Q 010759 209 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~~~ 287 (502)
+.+|.+.|.++...|.|.+|++|+.||+|+||.+.+..+.......+.|.+|+|+|.+.. +++.+...++.|-+..-|.
T Consensus 396 yrGHtg~Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 396 YRGHTGLVRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGD 475 (733)
T ss_pred EeccCCeEEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCceEEeCccccc
Confidence 356789999999999999999999999999999865433333334568999999998763 4444444445555532220
Q ss_pred --------------------------e-----------eEEeeecccCeEEEecCCCc-eEEEE---cCCCeEEEEEcCC
Q 010759 288 --------------------------W-----------KQQFEFHSGPTLDVDWRNNV-SFATS---STDNMIYVCKIGE 326 (502)
Q Consensus 288 --------------------------~-----------~~~~~~~~~~~~~~~~~~~~-~~~~~---~~d~~i~~~~~~~ 326 (502)
| +...-.|..++..+.|+... .|++. +....|.+..+..
T Consensus 476 ~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK 555 (733)
T KOG0650|consen 476 RLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK 555 (733)
T ss_pred hhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccc
Confidence 0 01122344556677786544 34433 3345788888876
Q ss_pred CcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE
Q 010759 327 NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA 406 (502)
Q Consensus 327 ~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg 406 (502)
.+....|.-..+.|.++.|+|...+|+.++. ..|+|||+.....+..+......|.+++.+|.|. -|+.|
T Consensus 556 ~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq-~~vRiYdL~kqelvKkL~tg~kwiS~msihp~GD---------nli~g 625 (733)
T KOG0650|consen 556 RKSQSPFRKSKGLVQRVKFHPSKPYLFVATQ-RSVRIYDLSKQELVKKLLTGSKWISSMSIHPNGD---------NLILG 625 (733)
T ss_pred ccccCchhhcCCceeEEEecCCCceEEEEec-cceEEEehhHHHHHHHHhcCCeeeeeeeecCCCC---------eEEEe
Confidence 6655566666788999999999998888765 5799999998888888877778899999999886 36679
Q ss_pred eCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC------CCe---eEEEEec-----C
Q 010759 407 SFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK------EGK---IVKTYTG-----N 471 (502)
Q Consensus 407 s~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~------~~~---~~~~~~~-----~ 471 (502)
+.|+.+..+|+.-. ++..++..|...|++++|++.-.++++|+.||++.||.-. ..- .++.+.+ +
T Consensus 626 s~d~k~~WfDldlsskPyk~lr~H~~avr~Va~H~ryPLfas~sdDgtv~Vfhg~VY~Dl~qnpliVPlK~L~gH~~~~~ 705 (733)
T KOG0650|consen 626 SYDKKMCWFDLDLSSKPYKTLRLHEKAVRSVAFHKRYPLFASGSDDGTVIVFHGMVYNDLLQNPLIVPLKRLRGHEKTND 705 (733)
T ss_pred cCCCeeEEEEcccCcchhHHhhhhhhhhhhhhhccccceeeeecCCCcEEEEeeeeehhhhcCCceEeeeeccCceeecc
Confidence 99999999999855 4566788899999999999999999999999999999632 111 1334444 3
Q ss_pred CCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 472 GGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 472 ~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
.+|.++.|||.--+|.++++||+|++|
T Consensus 706 ~gVLd~~wHP~qpWLfsAGAd~tirlf 732 (733)
T KOG0650|consen 706 LGVLDTIWHPRQPWLFSAGADGTIRLF 732 (733)
T ss_pred cceEeecccCCCceEEecCCCceEEee
Confidence 468899999999999999999999998
No 163
>KOG2055 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=3.7e-21 Score=177.31 Aligned_cols=232 Identities=18% Similarity=0.273 Sum_probs=184.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCce---eEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCc
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTE 286 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~ 286 (502)
+..+.|+++.|+|....|++|+.||+++||.+.++. +..+.--..||.+.+|.|+|+ .+++++.......||+.+.
T Consensus 211 ps~~~I~sv~FHp~~plllvaG~d~~lrifqvDGk~N~~lqS~~l~~fPi~~a~f~p~G~~~i~~s~rrky~ysyDle~a 290 (514)
T KOG2055|consen 211 PSHGGITSVQFHPTAPLLLVAGLDGTLRIFQVDGKVNPKLQSIHLEKFPIQKAEFAPNGHSVIFTSGRRKYLYSYDLETA 290 (514)
T ss_pred cCcCCceEEEecCCCceEEEecCCCcEEEEEecCccChhheeeeeccCccceeeecCCCceEEEecccceEEEEeecccc
Confidence 345789999999999999999999999999988753 344445578999999999998 8999999999999999876
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
+..+ +....|+. ..+.....+|++++|+..+..|.|.+-.
T Consensus 291 k~~k---------------------------------------~~~~~g~e~~~~e~FeVShd~~fia~~G~~G~I~lLh 331 (514)
T KOG2055|consen 291 KVTK---------------------------------------LKPPYGVEEKSMERFEVSHDSNFIAIAGNNGHIHLLH 331 (514)
T ss_pred cccc---------------------------------------ccCCCCcccchhheeEecCCCCeEEEcccCceEEeeh
Confidence 5432 11122222 2355677899999999999999999999
Q ss_pred CCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC-CEEEEEECCCCCE
Q 010759 366 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE-PVYSLAFSPTGEY 444 (502)
Q Consensus 366 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~spdg~~ 444 (502)
..++..+.+++. .+.+..++|+.++. .|...+.+|.|.+||++...+++.+..... .=++++.|++|.|
T Consensus 332 akT~eli~s~Ki-eG~v~~~~fsSdsk---------~l~~~~~~GeV~v~nl~~~~~~~rf~D~G~v~gts~~~S~ng~y 401 (514)
T KOG2055|consen 332 AKTKELITSFKI-EGVVSDFTFSSDSK---------ELLASGGTGEVYVWNLRQNSCLHRFVDDGSVHGTSLCISLNGSY 401 (514)
T ss_pred hhhhhhhheeee-ccEEeeEEEecCCc---------EEEEEcCCceEEEEecCCcceEEEEeecCccceeeeeecCCCce
Confidence 999998888763 57899999998875 455556689999999999999888763321 2367888999999
Q ss_pred EEEEeCCCcEEEEeCCCC------eeEEEEec-CCCEEEEEECCCCCEEEEEEC
Q 010759 445 LASGSLDKSMHIWSLKEG------KIVKTYTG-NGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~~~------~~~~~~~~-~~~i~~~~ws~~g~~la~~~~ 491 (502)
||+||..|.|.||+..+- +.++++.. -..|.+++|+||+++||.|+.
T Consensus 402 lA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~ 455 (514)
T KOG2055|consen 402 LATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASR 455 (514)
T ss_pred EEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhh
Confidence 999999999999996542 33333332 357899999999999999976
No 164
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.88 E-value=9.2e-21 Score=171.15 Aligned_cols=292 Identities=17% Similarity=0.256 Sum_probs=210.4
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.-+.+|.+.|+++.||.++++||+||.|..+++|++...-.... ..|+. +. ...|...|.|++|....++
T Consensus 50 KD~~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~--~KPI~------~~--~~~H~SNIF~L~F~~~N~~ 119 (609)
T KOG4227|consen 50 KDVREHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKT--PKPIG------VM--EHPHRSNIFSLEFDLENRF 119 (609)
T ss_pred hhhhhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcC--CCCce------ec--cCccccceEEEEEccCCee
Confidence 34779999999999999999999999999999999753211110 01111 11 1245578999999999999
Q ss_pred EEEEECCCcEEEEECCCceeEeecCCCC---CEEEEEecCCCCEEEEecCCCeEEEEeccCccee-EEeee--cccCeEE
Q 010759 228 LATGSYDGQARIWSTNGDLKCTLSKHKG---PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-QQFEF--HSGPTLD 301 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~~~~~~~~h~~---~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~-~~~~~--~~~~~~~ 301 (502)
+++|+.+++|.+-|++.........|.. .|+.+..+|..+.|++.+.++.|.+||.+..... ..+.. .......
T Consensus 120 ~~SG~~~~~VI~HDiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t 199 (609)
T KOG4227|consen 120 LYSGERWGTVIKHDIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYT 199 (609)
T ss_pred EecCCCcceeEeeecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCcccee
Confidence 9999999999999998776655555654 9999999999999999999999999998765421 11111 1112234
Q ss_pred EecC--CCceEEEEcCCCeEEEEEcCCCc-ceeeecCC------CcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-
Q 010759 302 VDWR--NNVSFATSSTDNMIYVCKIGENR-PIKTFAGH------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY- 371 (502)
Q Consensus 302 ~~~~--~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~~h------~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~- 371 (502)
+.|. ....+++.+..+-+-+|+++... ++..+.+. ...-.++.|+|+|+.|.+--.-..-.+||+.+.++
T Consensus 200 ~~F~P~~P~Li~~~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~Q~msiRR~~~P~~~D~~S~R~~ 279 (609)
T KOG4227|consen 200 AEFHPETPALILVNSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGNQFMSIRRGKCPLYFDFISQRCF 279 (609)
T ss_pred eeecCCCceeEEeccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCCeehhhhccCCCEEeeeecccce
Confidence 4443 34566777777888899987543 33332222 12336788999999998877666667788776443
Q ss_pred eeecccCC-------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC----------C-------------e
Q 010759 372 VHDLREHS-------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL----------G-------------K 421 (502)
Q Consensus 372 ~~~~~~~~-------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~----------~-------------~ 421 (502)
+..+. |. ..+.+++|.-+ +-+++|+.+-.|++|.+.. | +
T Consensus 280 V~k~D-~N~~GY~N~~T~KS~~F~~D----------~~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~ 348 (609)
T KOG4227|consen 280 VLKSD-HNPNGYCNIKTIKSMTFIDD----------YTVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEK 348 (609)
T ss_pred eEecc-CCCCcceeeeeeeeeeeecc----------eeeeccCcccceEEEecCCCccccCccccCcchhhCchhheecc
Confidence 32222 22 23445555443 2489999999999998632 1 2
Q ss_pred EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 422 LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 422 ~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
.+..++||...++.+.|+|...+|++.|-.+.++||.-.
T Consensus 349 ~~~VLrGHRSv~NQVRF~~H~~~l~SSGVE~~~KlWS~~ 387 (609)
T KOG4227|consen 349 ELTVLRGHRSVPNQVRFSQHNNLLVSSGVENSFKLWSDH 387 (609)
T ss_pred eeEEEecccccccceeecCCcceEeccchhhheeccccc
Confidence 345689999999999999999999999999999999754
No 165
>KOG1009 consensus Chromatin assembly complex 1 subunit B/CAC2 (contains WD40 repeats) [Chromatin structure and dynamics; Replication, recombination and repair]
Probab=99.87 E-value=5e-20 Score=167.44 Aligned_cols=293 Identities=22% Similarity=0.328 Sum_probs=194.3
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCC---CCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSN---GGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
..|..|...|++|.|+|+|.+||||+.+|.|.+|....-... ..+...+-...+.+... .|...|+.++|+|+
T Consensus 59 s~Ls~H~~aVN~vRf~p~gelLASg~D~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr----~h~~diydL~Ws~d 134 (434)
T KOG1009|consen 59 SSLSRHTRAVNVVRFSPDGELLASGGDGGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLR----GHRDDIYDLAWSPD 134 (434)
T ss_pred ecccCCcceeEEEEEcCCcCeeeecCCCceEEEEEecCcCCccccchhhhCccceEEEEEec----ccccchhhhhccCC
Confidence 468899999999999999999999999999999986631110 00111111122233333 36788999999999
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+.++++|+.|..+++||+. +.+.+.+..|...|..++|.|-++++++-|.|...+.+.+........... .++
T Consensus 135 ~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~---~~m--- 208 (434)
T KOG1009|consen 135 SNFLVSGSVDNSVRLWDVHAGQLLAILDDHEHYVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGL---DIM--- 208 (434)
T ss_pred CceeeeeeccceEEEEEeccceeEeeccccccccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeee---eEe---
Confidence 9999999999999999986 566778899999999999999999999999999777777655443332211 000
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC----CCc-----EEEEeCC-CCceee
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD----DVT-----AKIWNMK-QDKYVH 373 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~----dg~-----i~iwd~~-~~~~~~ 373 (502)
.+-....+.-..+.+-....++ .-...++|+|+|.++++.+. .+. ..+|+-+ ..+++.
T Consensus 209 ------~~~~~~~~e~~s~rLfhDeTlk------sFFrRlsfTPdG~llvtPag~~~~g~~~~~n~tYvfsrk~l~rP~~ 276 (434)
T KOG1009|consen 209 ------PAKAFNEREGKSTRLFHDETLK------SFFRRLSFTPDGSLLVTPAGLFKVGGGVFRNTSYVFSRKDLKRPAA 276 (434)
T ss_pred ------eecccCCCCcceeeeeecCchh------hhhhhcccCCCCcEEEcccceeeeCCceeeceeEeeccccccCcee
Confidence 0000101100111110111111 12446889999999887643 222 2333322 123344
Q ss_pred ecccCCCcEEEEEEccCCC----CC------CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCC
Q 010759 374 DLREHSKEIYTIRWSPTGS----GT------NNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTG 442 (502)
Q Consensus 374 ~~~~~~~~i~~~~~sp~g~----~~------~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg 442 (502)
.+.....+...++|+|--. .. ..| -.+++|.++. ..|.|||.++..++... +-|-.+|++++|++||
T Consensus 277 ~lp~~~k~~lavr~~pVy~elrp~~~~~~~~~lp-yrlvfaiAt~-~svyvydtq~~~P~~~v~nihy~~iTDiaws~dg 354 (434)
T KOG1009|consen 277 RLPSPKKPALAVRFSPVYYELRPLSSEKFLFVLP-YRLVFAIATK-NSVYVYDTQTLEPLAVVDNIHYSAITDIAWSDDG 354 (434)
T ss_pred ecCCCCcceEEEEeeeeEEEeccccccccccccc-cceEEEEeec-ceEEEeccccccceEEEeeeeeeeecceeecCCC
Confidence 4555566777777776321 00 011 1234555654 57999999988887765 4578899999999999
Q ss_pred CEEEEEeCCCcEEEEeCCCCee
Q 010759 443 EYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
.+|+..|.||..-+-.++.+++
T Consensus 355 ~~l~vSS~DGyCS~vtfe~~el 376 (434)
T KOG1009|consen 355 SVLLVSSTDGFCSLVTFEPWEL 376 (434)
T ss_pred cEEEEeccCCceEEEEEcchhc
Confidence 9999999999888877766544
No 166
>KOG4378 consensus Nuclear protein COP1 [Signal transduction mechanisms]
Probab=99.87 E-value=9.5e-21 Score=175.88 Aligned_cols=262 Identities=18% Similarity=0.304 Sum_probs=203.5
Q ss_pred ceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 156 EVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 156 ~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
+|+.+.|+.... .+++-+.|..+++|.-... . + .+..++...+ ..-.|++......|+++||..
T Consensus 36 g~~s~~w~~~n~lvvas~~gdk~~~~~~K~g~-~-~-------~Vp~~~k~~g------d~~~Cv~~~s~S~y~~sgG~~ 100 (673)
T KOG4378|consen 36 GDFSFNWQRRNFLVVASMAGDKVMRIKEKDGK-T-P-------EVPRVRKLTG------DNAFCVACASQSLYEISGGQS 100 (673)
T ss_pred cceeeeccccceEEEeecCCceeEEEecccCC-C-C-------ccceeecccc------chHHHHhhhhcceeeeccCcC
Confidence 489999987664 3445567889999963321 0 0 0111111111 123444444555899999999
Q ss_pred CcEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe-EEEecCCC--ceE
Q 010759 235 GQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNN--VSF 310 (502)
Q Consensus 235 g~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~ 310 (502)
+.|+|||+..+++. .+..|+..|+++.++-...||++++-.|-|.|..+.++.....|....+.+ ..+.|... ..+
T Consensus 101 ~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~sgqsvRll~ys~skr~lL 180 (673)
T KOG4378|consen 101 GCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTIDSGQSVRLLRYSPSKRFLL 180 (673)
T ss_pred ceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecCCCCeEEEeecccccceee
Confidence 99999999865544 578899999999999999999999999999999999988777777665544 46677544 345
Q ss_pred EEEcCCCeEEEEEcCCCcceeee-cCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 311 ATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 311 ~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
.+++++|.|.+||+....|+..+ ..|..+...|+|+|.. .+|++.+.|..|.+||....+....+. ...+..+++|+
T Consensus 181 ~~asd~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~~s~~s~~~l~-y~~Plstvaf~ 259 (673)
T KOG4378|consen 181 SIASDKGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDIRSQASTDRLT-YSHPLSTVAFS 259 (673)
T ss_pred EeeccCCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeecccccccceee-ecCCcceeeec
Confidence 67799999999999988887654 4789999999999965 578999999999999998776655553 45688999999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCC
Q 010759 389 PTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTG 442 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg 442 (502)
++|. +|+.|+..|.|..||++. ..++.++..|...|++|+|-|.-
T Consensus 260 ~~G~---------~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~ 305 (673)
T KOG4378|consen 260 ECGT---------YLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP 305 (673)
T ss_pred CCce---------EEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc
Confidence 9996 899999999999999985 45788899999999999997764
No 167
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.87 E-value=7.9e-22 Score=193.39 Aligned_cols=282 Identities=26% Similarity=0.450 Sum_probs=215.3
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+..|.||...|+|+.|...|.+++||+.|..+|||...++.+. . ...+|++.|+.++.+.+..
T Consensus 183 ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~l-------------A----s~rGhs~ditdlavs~~n~ 245 (1113)
T KOG0644|consen 183 IKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCL-------------A----SCRGHSGDITDLAVSSNNT 245 (1113)
T ss_pred HHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhh-------------c----cCCCCccccchhccchhhh
Confidence 4568899999999999999999999999999999997665432 1 2235688899999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
++++++.|..|++|.+. +..+..+.+|+++|++++|+|-. +.+.||++++||.+-.. ..+.
T Consensus 246 ~iaaaS~D~vIrvWrl~~~~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~----~~y~---------- 307 (1113)
T KOG0644|consen 246 MIAAASNDKVIRVWRLPDGAPVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEP----RIYV---------- 307 (1113)
T ss_pred hhhhcccCceEEEEecCCCchHHHHhccccceeeeccCccc----cCCCCCceEeccccccc----cccC----------
Confidence 99999999999999976 45666889999999999999954 88899999999976110 0000
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..|.. +. -..-+.++.|-.++.-++||+.|+..+.|.+..-.+ +...+.-+
T Consensus 308 ---------------------prp~~-~~-~~~~~~s~~~~~~~~~f~Tgs~d~ea~n~e~~~l~~------~~~~lif~ 358 (1113)
T KOG0644|consen 308 ---------------------PRPLK-FT-EKDLVDSILFENNGDRFLTGSRDGEARNHEFEQLAW------RSNLLIFV 358 (1113)
T ss_pred ---------------------CCCCC-cc-cccceeeeeccccccccccccCCcccccchhhHhhh------hccceEEE
Confidence 01110 00 012355666777788899999999998886542211 11111122
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEeCCCCee
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~ 464 (502)
.++.+.. .+.+++-.+..+++|++.+|..++.+.+|...++.|.++|-...+ .+++.||...|||+-.|..
T Consensus 359 t~ssd~~--------~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hpfn~ri~msag~dgst~iwdi~eg~p 430 (1113)
T KOG0644|consen 359 TRSSDLS--------SIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHPFNPRIAMSAGYDGSTIIWDIWEGIP 430 (1113)
T ss_pred ecccccc--------ccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecCCCcHhhhhccCCCceEeeecccCCc
Confidence 2222211 245667778889999999999999999999999999999976555 5899999999999999887
Q ss_pred EEEE-ecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 465 VKTY-TGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 465 ~~~~-~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++.+ .+++.+....||+||..++....-|.+.|+..
T Consensus 431 ik~y~~gh~kl~d~kFSqdgts~~lsd~hgql~i~g~ 467 (1113)
T KOG0644|consen 431 IKHYFIGHGKLVDGKFSQDGTSIALSDDHGQLYILGT 467 (1113)
T ss_pred ceeeecccceeeccccCCCCceEecCCCCCceEEecc
Confidence 7665 46778899999999999998888888887754
No 168
>KOG0307 consensus Vesicle coat complex COPII, subunit SEC31 [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.87 E-value=1.7e-21 Score=198.03 Aligned_cols=275 Identities=23% Similarity=0.428 Sum_probs=209.7
Q ss_pred EEEECCCCC-EEEEE----------ECCCcEEEEECCC---c----eeEeecCCCCCEEEEEecCCCCE----EEEecCC
Q 010759 218 TLDWNGEGT-LLATG----------SYDGQARIWSTNG---D----LKCTLSKHKGPIFSLKWNKKGDY----LLTGSCD 275 (502)
Q Consensus 218 ~l~~s~~~~-~l~sg----------~~dg~i~iw~~~~---~----~~~~~~~h~~~V~~l~~~~~~~~----l~sgs~D 275 (502)
.++|+|.+. ++++| +.+.++-||.+.- . ....+. ....-+.|+|.+.+.. |+.|..|
T Consensus 11 ~~awSp~~~~~laagt~aq~~D~sfst~~slEifeld~~~~~~dlk~~~s~~-s~~rF~kL~W~~~g~~~~GlIaGG~ed 89 (1049)
T KOG0307|consen 11 TFAWSPASPPLLAAGTAAQQFDASFSTSASLEIFELDFSDESSDLKPVGSLQ-SSNRFNKLAWGSYGSHSHGLIAGGLED 89 (1049)
T ss_pred eEEecCCCchhhHHHhhhhccccccccccccceeeecccCcccccccccccc-ccccceeeeecccCCCccceeeccccC
Confidence 467888875 44444 3345566665321 1 111111 2345588999987765 8888999
Q ss_pred CeEEEEeccCc------ceeEEeeecccCeEEEecCC--CceEEEEcCCCeEEEEEcCCCcceeeec--CCCcceeEEEE
Q 010759 276 KTAIVWDVKTE------EWKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTFA--GHQGEVNCVKW 345 (502)
Q Consensus 276 ~~v~iwd~~~~------~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~--~h~~~v~~v~~ 345 (502)
|.|.+||.... ..+.++..|.++|..++|.. ...+++++.+|.|++||+.....-..+. .-...|.+++|
T Consensus 90 G~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWDlnn~~tP~~~~~~~~~~eI~~lsW 169 (1049)
T KOG0307|consen 90 GNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWDLNKPETPFTPGSQAPPSEIKCLSW 169 (1049)
T ss_pred CceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEeccCCcCCCCCCCCCCCcccceEecc
Confidence 99999997652 34557788999999999964 4468899999999999997644333332 13467999999
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCceeeecccCCC--cEEEEEEccCCCCCCCCCCcEEEEEEeCC---CeEEEEeCCC
Q 010759 346 DPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILASASFD---STVKLWDVEL 419 (502)
Q Consensus 346 ~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~--~i~~~~~sp~g~~~~~~~~~~~l~sgs~d---g~i~iwd~~~ 419 (502)
+.. ...|++++.+|++.|||++..+.+-.+..+.. .+..+.|+|+... .|++++.| -.|.+||++.
T Consensus 170 NrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aT--------ql~~As~dd~~PviqlWDlR~ 241 (1049)
T KOG0307|consen 170 NRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHAT--------QLLVASGDDSAPVIQLWDLRF 241 (1049)
T ss_pred chhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCce--------eeeeecCCCCCceeEeecccc
Confidence 875 45689999999999999999988877776654 4678999998863 34444433 4699999985
Q ss_pred C-eEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCC-CEEEEEECCCeE
Q 010759 420 G-KLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEG-DKIAACFANHTV 495 (502)
Q Consensus 420 ~-~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g-~~la~~~~~~~v 495 (502)
- ..+.++.+|...|.++.|++.+ .+|+|++.|++|.+|+.++|+++..+... ..++.+.|.|.. ..+|+++-+|.|
T Consensus 242 assP~k~~~~H~~GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr~P~~~A~asfdgkI 321 (1049)
T KOG0307|consen 242 ASSPLKILEGHQRGILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPRNPSVMAAASFDGKI 321 (1049)
T ss_pred cCCchhhhcccccceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCCCcchhhhheeccce
Confidence 3 5677889999999999999977 89999999999999999999999988764 458999999976 489999999999
Q ss_pred EEEEee
Q 010759 496 CVLDFR 501 (502)
Q Consensus 496 ~v~~~~ 501 (502)
.||.+.
T Consensus 322 ~I~sl~ 327 (1049)
T KOG0307|consen 322 SIYSLQ 327 (1049)
T ss_pred eeeeee
Confidence 999874
No 169
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.86 E-value=4.5e-20 Score=160.56 Aligned_cols=255 Identities=26% Similarity=0.425 Sum_probs=184.7
Q ss_pred eccccccceeEEEECCC-CCEEEEEeCC-------CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE
Q 010759 149 ILEGHTSEVCACAWSPA-GSLLASGSGD-------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD 220 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd-~~~l~sgs~D-------~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~ 220 (502)
+|..|.+.|..++-+|- .+.|+|+-.| ..+.||.+....... +...+..+..-...+.+.|.|+.
T Consensus 58 vf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S-------~~~tlE~v~~Ldteavg~i~cve 130 (370)
T KOG1007|consen 58 VFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQS-------NSSTLECVASLDTEAVGKINCVE 130 (370)
T ss_pred hhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCcc-------ccchhhHhhcCCHHHhCceeeEE
Confidence 56778999999999996 4566665442 247799886532210 01111111111123345799999
Q ss_pred ECCCCCEEEEEECCCcEEEEECCCcee--Eee-----cCCCCCEEEEEecC--CCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNGDLK--CTL-----SKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~~~~--~~~-----~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
|.|++..+++-. |..|.+|++..... ..+ ..|....++-+|+| +++.+++. .|+++..||++++.....
T Consensus 131 w~Pns~klasm~-dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~~D~RT~~~~~s 208 (370)
T KOG1007|consen 131 WEPNSDKLASMD-DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQFWDLRTMKKNNS 208 (370)
T ss_pred EcCCCCeeEEec-cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEEEEccchhhhcc
Confidence 999999988765 88999999764322 211 23566788899998 56666665 589999999998753211
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCC-
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQD- 369 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~- 369 (502)
.-..|...|..++|+|+.+ +|+||++||.|+|||.+.-
T Consensus 209 ----------------------------------------I~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk 248 (370)
T KOG1007|consen 209 ----------------------------------------IEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTK 248 (370)
T ss_pred ----------------------------------------hhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCC
Confidence 1134666788999999865 5899999999999999854
Q ss_pred ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-----------------------------
Q 010759 370 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----------------------------- 420 (502)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----------------------------- 420 (502)
.++.++..|...+++++|.|... -++++|+.|..|.+|....-
T Consensus 249 ~pv~el~~HsHWvW~VRfn~~hd--------qLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~d 320 (370)
T KOG1007|consen 249 FPVQELPGHSHWVWAVRFNPEHD--------QLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQD 320 (370)
T ss_pred ccccccCCCceEEEEEEecCccc--------eEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccc
Confidence 56889999999999999988653 37889999999999965321
Q ss_pred eEEEEeeCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEeCC
Q 010759 421 KLLYSLNGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLK 460 (502)
Q Consensus 421 ~~~~~~~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~ 460 (502)
..+.++..|.+.|++++||.-..++ |+-|.||++.|=.+.
T Consensus 321 g~l~tydehEDSVY~~aWSsadPWiFASLSYDGRviIs~V~ 361 (370)
T KOG1007|consen 321 GQLETYDEHEDSVYALAWSSADPWIFASLSYDGRVIISSVP 361 (370)
T ss_pred cccccccccccceEEEeeccCCCeeEEEeccCceEEeecCC
Confidence 1234677899999999999877765 678999999987764
No 170
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.86 E-value=1.9e-19 Score=178.45 Aligned_cols=241 Identities=21% Similarity=0.351 Sum_probs=183.8
Q ss_pred CCCeEEEEECC-CCCEEEEEECCCcEEEEECCCcee-------EeecCCCCCEEEEEecCCCC--EEEEecCCCeEEEEe
Q 010759 213 SKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLK-------CTLSKHKGPIFSLKWNKKGD--YLLTGSCDKTAIVWD 282 (502)
Q Consensus 213 ~~~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~-------~~~~~h~~~V~~l~~~~~~~--~l~sgs~D~~v~iwd 282 (502)
...|.|++|+| +..+++.|.++|+|.+||+..... .....|..+|+.+.|..+-. -|+++|.||.|..|+
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W~ 321 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSWD 321 (555)
T ss_pred CCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeeee
Confidence 46799999999 567888999999999999764321 23457899999999976544 499999999999998
Q ss_pred ccCccee-EE----eee-------cccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCc--------ceeeecCCCcce
Q 010759 283 VKTEEWK-QQ----FEF-------HSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENR--------PIKTFAGHQGEV 340 (502)
Q Consensus 283 ~~~~~~~-~~----~~~-------~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~--------~~~~~~~h~~~v 340 (502)
++.-... .. ... ....+..+.| .+...|+.|+..|.|+........ ++..+..|.+.|
T Consensus 322 ~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~~~~~~~~~~~~~~~~h~g~v 401 (555)
T KOG1587|consen 322 TDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYTPAPEVSYKGHSTFITHIGPV 401 (555)
T ss_pred ccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCcccccccccccccccccCcce
Confidence 7643221 00 011 1123455555 466789999999999985544322 233556788999
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 341 NCVKWDPTGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
.++.++|-+..++..+.|.+++||... ...++..+..+...+++++|||.-. .+++++..||+|.|||+..
T Consensus 402 ~~v~~nPF~~k~fls~gDW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrp--------avF~~~d~~G~l~iWDLl~ 473 (555)
T KOG1587|consen 402 YAVSRNPFYPKNFLSVGDWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRP--------AVFATVDGDGNLDIWDLLQ 473 (555)
T ss_pred EeeecCCCccceeeeeccceeEeccccCCCCcchhhhhccceeeeeEEcCcCc--------eEEEEEcCCCceehhhhhc
Confidence 999999988665555559999999987 6667777777778899999999765 4899999999999999864
Q ss_pred C--eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 420 G--KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 420 ~--~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
. .++.+..-+....+.+.|++.|++|++|...|++++|++..
T Consensus 474 ~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 474 DDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 3 34555554566778889999999999999999999999864
No 171
>KOG2919 consensus Guanine nucleotide-binding protein [General function prediction only]
Probab=99.85 E-value=2e-19 Score=158.87 Aligned_cols=237 Identities=20% Similarity=0.337 Sum_probs=173.6
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeE-------------eec-CCCCCEEEEEec-------CCCCEEEEecC
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC-------------TLS-KHKGPIFSLKWN-------KKGDYLLTGSC 274 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~-------------~~~-~h~~~V~~l~~~-------~~~~~l~sgs~ 274 (502)
...+.|||||..|++-+.|..+++|++...... ++. .....|+.-+|- |+.+++++.+.
T Consensus 52 ~kgckWSPDGSciL~~sedn~l~~~nlP~dlys~~~~~~~~~~~~~~~r~~eg~tvydy~wYs~M~s~qP~t~l~a~ssr 131 (406)
T KOG2919|consen 52 LKGCKWSPDGSCILSLSEDNCLNCWNLPFDLYSKKADGPLNFSKHLSYRYQEGETVYDYCWYSRMKSDQPSTNLFAVSSR 131 (406)
T ss_pred hccceeCCCCceEEeecccCeeeEEecChhhcccCCCCccccccceeEEeccCCEEEEEEeeeccccCCCccceeeeccc
Confidence 345789999999999999999999986432110 111 112345555553 56677777888
Q ss_pred CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCc---ceeEEEEcCCCCE
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG---EVNCVKWDPTGSL 351 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~---~v~~v~~~p~~~~ 351 (502)
+.-|.+||.-+++....|... .|.. ...+++|+|||..
T Consensus 132 ~~PIh~wdaftG~lraSy~~y---------------------------------------dh~de~taAhsL~Fs~DGeq 172 (406)
T KOG2919|consen 132 DQPIHLWDAFTGKLRASYRAY---------------------------------------DHQDEYTAAHSLQFSPDGEQ 172 (406)
T ss_pred cCceeeeeccccccccchhhh---------------------------------------hhHHhhhhheeEEecCCCCe
Confidence 888888887777655443210 1221 2358999999999
Q ss_pred EEEEeCCCcEEEEeC-CCCce--eeecccC-----CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE
Q 010759 352 LASCSDDVTAKIWNM-KQDKY--VHDLREH-----SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL 423 (502)
Q Consensus 352 l~sgs~dg~i~iwd~-~~~~~--~~~~~~~-----~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~ 423 (502)
|++| ....|++||+ +.++. +.....+ .+-+.+++|+|.... .++.|+.-..+-|+.-..+.++
T Consensus 173 lfaG-ykrcirvFdt~RpGr~c~vy~t~~~~k~gq~giisc~a~sP~~~~--------~~a~gsY~q~~giy~~~~~~pl 243 (406)
T KOG2919|consen 173 LFAG-YKRCIRVFDTSRPGRDCPVYTTVTKGKFGQKGIISCFAFSPMDSK--------TLAVGSYGQRVGIYNDDGRRPL 243 (406)
T ss_pred Eeec-ccceEEEeeccCCCCCCcchhhhhcccccccceeeeeeccCCCCc--------ceeeecccceeeeEecCCCCce
Confidence 9765 6679999998 55542 2222222 456788899997653 6889999999999999999999
Q ss_pred EEeeCCCCCEEEEEECCCCCEEEEEeC-CCcEEEEeCCCCe-eEEEEe-----cCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 424 YSLNGHREPVYSLAFSPTGEYLASGSL-DKSMHIWSLKEGK-IVKTYT-----GNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~spdg~~lasgs~-Dg~i~iw~~~~~~-~~~~~~-----~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
+.+.+|.+.|+.|.|.++|+.|.+|+. |-.|..||++.-+ .+..+. .+..| -+...|+|++||+|+.+|.|+
T Consensus 244 ~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI-~FDld~~~~~LasG~tdG~V~ 322 (406)
T KOG2919|consen 244 QLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPVYALERHVGDTNQRI-LFDLDPKGEILASGDTDGSVR 322 (406)
T ss_pred eeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchhhhhhhhccCccceE-EEecCCCCceeeccCCCccEE
Confidence 999999999999999999999999875 7789999998643 333332 23334 345689999999999999999
Q ss_pred EEEee
Q 010759 497 VLDFR 501 (502)
Q Consensus 497 v~~~~ 501 (502)
|||++
T Consensus 323 vwdlk 327 (406)
T KOG2919|consen 323 VWDLK 327 (406)
T ss_pred EEecC
Confidence 99986
No 172
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.84 E-value=1.7e-19 Score=169.19 Aligned_cols=272 Identities=18% Similarity=0.288 Sum_probs=195.7
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
|+.-|.||.|+.....+++++.+..++-|++.+... ..+...+-.++..-+..++.... -.....|+.++
T Consensus 13 ~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~-~~~~~p~df~pt~~h~~~rs~~~---------g~~~d~~~i~s 82 (737)
T KOG1524|consen 13 NSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSV-EVAKLPDDFVPTDMHLGGRSSGG---------GKGSDTLLICS 82 (737)
T ss_pred cceeEEeecccccceEEEeccCceEEEeecccchhh-hhhhCCcccCCccccccccccCC---------CCCcceEEEEc
Confidence 566678999998887777776555555566543211 00000000000000111110000 11235688889
Q ss_pred CCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 233 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
.||.+.|-+..+.....+..|.++|.+-+|+|+|.-|++++.||.|++|. ++|-+..++.....++.++.|.++..-+.
T Consensus 83 ~DGkf~il~k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWS-rsGMLRStl~Q~~~~v~c~~W~p~S~~vl 161 (737)
T KOG1524|consen 83 NDGRFVILNKSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWS-RSGMLRSTVVQNEESIRCARWAPNSNSIV 161 (737)
T ss_pred CCceEEEecccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEe-ccchHHHHHhhcCceeEEEEECCCCCceE
Confidence 99999999988888888899999999999999999999999999999998 45544444555566888999976654444
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCC
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGS 392 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~ 392 (502)
-...+.+.+-.+..+..+..++.|.+-|.|+.|+|...++++|++|-..+|||.. |..+.+-..|.-+|++++|.|+.
T Consensus 162 ~c~g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~- 239 (737)
T KOG1524|consen 162 FCQGGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEK- 239 (737)
T ss_pred EecCCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeecccc-
Confidence 4455667777777777777889999999999999999999999999999999965 55666667788999999999984
Q ss_pred CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 393 GTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 393 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.++.+|.+ ++|+= ....+.|..++|||||..++.|...|.+.+=.
T Consensus 240 ---------~~~v~S~n-t~R~~-----------~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~ 284 (737)
T KOG1524|consen 240 ---------DYLLWSYN-TARFS-----------SPRVGSIFNLSWSADGTQATCGTSTGQLIVAY 284 (737)
T ss_pred ---------ceeeeeee-eeeec-----------CCCccceEEEEEcCCCceeeccccCceEEEee
Confidence 45666653 45421 12346799999999999999999988776543
No 173
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=4.3e-18 Score=144.86 Aligned_cols=267 Identities=19% Similarity=0.282 Sum_probs=185.6
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCC----------c-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNG----------D-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~----------~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~ 284 (502)
|..-+|+|.+++|+.|..+|.|.+..+.. + ....+.+|.++|+.++|+. .+|++|+ ||.|+-|-.+
T Consensus 13 vf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv~eqahdgpiy~~~f~d--~~Lls~g-dG~V~gw~W~ 89 (325)
T KOG0649|consen 13 VFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIVPEQAHDGPIYYLAFHD--DFLLSGG-DGLVYGWEWN 89 (325)
T ss_pred HHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCcceeeccccCCCeeeeeeeh--hheeecc-CceEEEeeeh
Confidence 56668999999999999999999998531 1 2334589999999999983 3566664 6999998765
Q ss_pred Ccce--------eEEeeecc--cC---eEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC
Q 010759 285 TEEW--------KQQFEFHS--GP---TLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 350 (502)
Q Consensus 285 ~~~~--------~~~~~~~~--~~---~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 350 (502)
.... ......+. .+ ++++-.. ....++.++.|+.++-|++.+++..++|+||+..|.++.-.....
T Consensus 90 E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~ 169 (325)
T KOG0649|consen 90 EEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANG 169 (325)
T ss_pred hhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeeeeeecccCc
Confidence 4321 11112222 12 2333222 334555666999999999999999999999999999999866666
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecccC----------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC
Q 010759 351 LLASCSDDVTAKIWNMKQDKYVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG 420 (502)
Q Consensus 351 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~----------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 420 (502)
.+++|++||++||||.++++.+..+... ...|.+++-+.+ .|+.| ..-.+.+|+++..
T Consensus 170 qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~~ed-----------WlvCG-gGp~lslwhLrss 237 (325)
T KOG0649|consen 170 QILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAVNED-----------WLVCG-GGPKLSLWHLRSS 237 (325)
T ss_pred ceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEeccCc-----------eEEec-CCCceeEEeccCC
Confidence 7889999999999999999988765322 123444543322 45544 4567999999988
Q ss_pred eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCC-EEEEEECCCeEEEE
Q 010759 421 KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGD-KIAACFANHTVCVL 498 (502)
Q Consensus 421 ~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~-~la~~~~~~~v~v~ 498 (502)
++...+. -..+|..+.|-.| .++++|..+.|.-|.+. |.+-...+. ....++..|+..-- .|-+++....++|+
T Consensus 238 e~t~vfp-ipa~v~~v~F~~d--~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag~s~~~~i~ 313 (325)
T KOG0649|consen 238 ESTCVFP-IPARVHLVDFVDD--CVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFISIAGFSNKLHIL 313 (325)
T ss_pred CceEEEe-cccceeEeeeecc--eEEEeccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEEecccceeeeee
Confidence 7766554 3456888888644 67788878889999875 443333333 45678888877654 44444445566666
Q ss_pred -Eee
Q 010759 499 -DFR 501 (502)
Q Consensus 499 -~~~ 501 (502)
|||
T Consensus 314 ~~~~ 317 (325)
T KOG0649|consen 314 KDFR 317 (325)
T ss_pred eccc
Confidence 554
No 174
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.84 E-value=6.5e-18 Score=167.90 Aligned_cols=279 Identities=22% Similarity=0.383 Sum_probs=196.9
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-----ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~ 285 (502)
.|...++|.++||.++++++|..||.|.+|.--+ .....+.-|..+|.++.|+++|.+|+||+..+-+.+|.+.+
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T 282 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLET 282 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecC
Confidence 3455689999999999999999999999997433 23456788999999999999999999999999999999999
Q ss_pred cceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcc---eeeec--------CCCcceeEEEEcCCCCEEE
Q 010759 286 EEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRP---IKTFA--------GHQGEVNCVKWDPTGSLLA 353 (502)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~---~~~~~--------~h~~~v~~v~~~p~~~~l~ 353 (502)
++ .+-+..-.+++..+.+.+ ...++....|+.|.+........ +..+. +..+-.+.++++|.-+.++
T Consensus 283 ~~-kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr~~~~v 361 (792)
T KOG1963|consen 283 GK-KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPRTNSLV 361 (792)
T ss_pred CC-cccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCCCCcee
Confidence 88 444555567777777754 44566677799888877643221 11111 1234567889999777788
Q ss_pred EEeCCCcEEEEeCCCCceeeeccc-----C------CCcEEEEEEccCCCCCCCCCCcEEEEEEe--------CC--CeE
Q 010759 354 SCSDDVTAKIWNMKQDKYVHDLRE-----H------SKEIYTIRWSPTGSGTNNPNQQLILASAS--------FD--STV 412 (502)
Q Consensus 354 sgs~dg~i~iwd~~~~~~~~~~~~-----~------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs--------~d--g~i 412 (502)
-.+..|.|.+||+.+...+..++. + .-.+++++.+-.|. +++|+- .| -.+
T Consensus 362 ln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs---------~maT~E~~~d~~~~~~~e~~L 432 (792)
T KOG1963|consen 362 LNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGS---------WMATLEARIDKFNFFDGEVSL 432 (792)
T ss_pred ecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccce---------EEEEeeeeehhhhccCceEEE
Confidence 889999999999988877665532 1 12345555554443 444432 22 357
Q ss_pred EEEeCCCCeEEEE-----eeCCCCCEEEEEEC-CCCC-EEEEEeCCCcEEEEeCC------CCee------EEEEecCCC
Q 010759 413 KLWDVELGKLLYS-----LNGHREPVYSLAFS-PTGE-YLASGSLDKSMHIWSLK------EGKI------VKTYTGNGG 473 (502)
Q Consensus 413 ~iwd~~~~~~~~~-----~~~h~~~v~~l~~s-pdg~-~lasgs~Dg~i~iw~~~------~~~~------~~~~~~~~~ 473 (502)
|+|-......-+. ...|...+...+|. |... .++++|.||.++||-+. .+.. +..| .+..
T Consensus 433 KFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~~i~sy-~k~~ 511 (792)
T KOG1963|consen 433 KFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRSVRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCKAIGSY-HKTP 511 (792)
T ss_pred EEEEEcCCcceeEEEEEEecCCCceeEEEEEecCcccceeEEeccCCeEEEEEEecccccCcCccceEEeeeecc-ccCc
Confidence 8897654333222 34687766666554 3333 89999999999999883 2221 2222 3567
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 474 IFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 474 i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+++|+.||..||.++ +++|.+||.+
T Consensus 512 i~a~~fs~dGslla~s~-~~~Itiwd~~ 538 (792)
T KOG1963|consen 512 ITALCFSQDGSLLAVSF-DDTITIWDYD 538 (792)
T ss_pred ccchhhcCCCcEEEEec-CCEEEEecCC
Confidence 89999999997766665 5689999965
No 175
>KOG1007 consensus WD repeat protein TSSC1, WD repeat superfamily [Function unknown]
Probab=99.84 E-value=8.8e-19 Score=152.60 Aligned_cols=258 Identities=21% Similarity=0.384 Sum_probs=189.9
Q ss_pred CCcEEEEECCCc----eeEeecCCCCCEEEEEecCCCCE-EEEecCC-------CeEEEEeccCc---------ceeEEe
Q 010759 234 DGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDY-LLTGSCD-------KTAIVWDVKTE---------EWKQQF 292 (502)
Q Consensus 234 dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D-------~~v~iwd~~~~---------~~~~~~ 292 (502)
|+.|.+-..+.+ ....|..|.+.|+.|+-+|-... |+++..+ ..+.||.+... +++..+
T Consensus 39 dNqVhll~~d~e~s~l~skvf~h~agEvw~las~P~d~~ilaT~yn~~s~s~vl~~aaiw~ipe~~~~S~~~tlE~v~~L 118 (370)
T KOG1007|consen 39 DNQVHLLRLDSEGSELLSKVFFHHAGEVWDLASSPFDQRILATVYNDTSDSGVLTGAAIWQIPEPLGQSNSSTLECVASL 118 (370)
T ss_pred cceeEEEEecCccchhhhhhhhcCCcceehhhcCCCCCceEEEEEeccCCCcceeeEEEEecccccCccccchhhHhhcC
Confidence 567776655322 23356778899999999997655 4555443 34679987532 222233
Q ss_pred e-ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc-eeee-----cCCCcceeEEEEcC--CCCEEEEEeCCCcEEE
Q 010759 293 E-FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP-IKTF-----AGHQGEVNCVKWDP--TGSLLASCSDDVTAKI 363 (502)
Q Consensus 293 ~-~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~-~~~~-----~~h~~~v~~v~~~p--~~~~l~sgs~dg~i~i 363 (502)
. .+.+.+.++.|.++..-+.+-.|+.|.+|++..... +..+ .+|....++-+|+| +|+.+++. .|++++.
T Consensus 119 dteavg~i~cvew~Pns~klasm~dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt-~d~tl~~ 197 (370)
T KOG1007|consen 119 DTEAVGKINCVEWEPNSDKLASMDDNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATT-SDSTLQF 197 (370)
T ss_pred CHHHhCceeeEEEcCCCCeeEEeccCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEe-CCCcEEE
Confidence 3 334577889998777666677799999999987654 2222 24566788899998 67888765 5789999
Q ss_pred EeCCCCceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCC
Q 010759 364 WNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 364 wd~~~~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spd 441 (502)
||+++.+....+. +|...+..+.|.|+- +++|++|+.||.|||||++.- .+++++.+|...|+++.|+|.
T Consensus 198 ~D~RT~~~~~sI~dAHgq~vrdlDfNpnk--------q~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~ 269 (370)
T KOG1007|consen 198 WDLRTMKKNNSIEDAHGQRVRDLDFNPNK--------QHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPE 269 (370)
T ss_pred EEccchhhhcchhhhhcceeeeccCCCCc--------eEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCc
Confidence 9999987766554 678889999887764 579999999999999999854 578899999999999999996
Q ss_pred -CCEEEEEeCCCcEEEEeCCCCe-----------------------------eEEEEec-CCCEEEEEECCCCC-EEEEE
Q 010759 442 -GEYLASGSLDKSMHIWSLKEGK-----------------------------IVKTYTG-NGGIFEVCWNKEGD-KIAAC 489 (502)
Q Consensus 442 -g~~lasgs~Dg~i~iw~~~~~~-----------------------------~~~~~~~-~~~i~~~~ws~~g~-~la~~ 489 (502)
.++|.+||.|..|.+|....-. ++.+|.. ...||+++||.-.- .+|+-
T Consensus 270 hdqLiLs~~SDs~V~Lsca~svSSE~qi~~~~dese~e~~dseer~kpL~dg~l~tydehEDSVY~~aWSsadPWiFASL 349 (370)
T KOG1007|consen 270 HDQLILSGGSDSAVNLSCASSVSSEQQIEFEDDESESEDEDSEERVKPLQDGQLETYDEHEDSVYALAWSSADPWIFASL 349 (370)
T ss_pred cceEEEecCCCceeEEEeccccccccccccccccccCcchhhHHhcccccccccccccccccceEEEeeccCCCeeEEEe
Confidence 5788999999999999653210 1224432 45799999998766 55666
Q ss_pred ECCCeEEEEEe
Q 010759 490 FANHTVCVLDF 500 (502)
Q Consensus 490 ~~~~~v~v~~~ 500 (502)
+.||.|.|=.+
T Consensus 350 SYDGRviIs~V 360 (370)
T KOG1007|consen 350 SYDGRVIISSV 360 (370)
T ss_pred ccCceEEeecC
Confidence 88999977544
No 176
>KOG0642 consensus Cell-cycle nuclear protein, contains WD-40 repeats [Cell cycle control, cell division, chromosome partitioning]
Probab=99.83 E-value=7e-20 Score=173.09 Aligned_cols=223 Identities=25% Similarity=0.424 Sum_probs=165.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC---------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEE
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 281 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~---------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iw 281 (502)
.|...|+.++|++....|++++.||++++|+++. ....+|.+|.++|.|+++.+.++++++|+.||+|+.|
T Consensus 292 s~~d~ir~l~~~~sep~lit~sed~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~~w 371 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASEDGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIRCW 371 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEeccccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceeeee
Confidence 4567789999999999999999999999999831 3456899999999999999999999999999999999
Q ss_pred eccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 282 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 282 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
++.... -.+..+. .......+.||.+.|+.+++|+....|++|+.||++
T Consensus 372 ~~p~n~--dp~ds~d-----------------------------p~vl~~~l~Ghtdavw~l~~s~~~~~Llscs~DgTv 420 (577)
T KOG0642|consen 372 NLPPNQ--DPDDSYD-----------------------------PSVLSGTLLGHTDAVWLLALSSTKDRLLSCSSDGTV 420 (577)
T ss_pred ccCCCC--CcccccC-----------------------------cchhccceeccccceeeeeecccccceeeecCCceE
Confidence 875211 0000000 011223577999999999999999899999999999
Q ss_pred EEEeCCCCceeeeccc---CCC-----------------------------cEEEEEEccCCC------------CCCCC
Q 010759 362 KIWNMKQDKYVHDLRE---HSK-----------------------------EIYTIRWSPTGS------------GTNNP 397 (502)
Q Consensus 362 ~iwd~~~~~~~~~~~~---~~~-----------------------------~i~~~~~sp~g~------------~~~~~ 397 (502)
++|....... .++.. +.- .+..+.+-+.+. ...+|
T Consensus 421 r~w~~~~~~~-~~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~~~~~in~vVs~~ 499 (577)
T KOG0642|consen 421 RLWEPTEESP-CTFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPRRYPQINKVVSHP 499 (577)
T ss_pred EeeccCCcCc-cccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCcccccCccceEEecC
Confidence 9998654433 11110 000 000011111100 00122
Q ss_pred CCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 398 NQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 398 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
+. -+.+++..|+.|+++|..+++.++....|...++++++.|+|.+|++|+.||+|++|.+.....+.
T Consensus 500 ~~-~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s~d~sv~l~kld~k~~~~ 567 (577)
T KOG0642|consen 500 TA-DITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGSHDGSVRLWKLDVKTCVL 567 (577)
T ss_pred CC-CeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeecCCceeehhhccchheee
Confidence 22 256788999999999999999999999999999999999999999999999999999987544443
No 177
>KOG1538 consensus Uncharacterized conserved protein WDR10, contains WD40 repeats [General function prediction only]
Probab=99.83 E-value=3.2e-17 Score=157.71 Aligned_cols=219 Identities=19% Similarity=0.308 Sum_probs=155.3
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeec------------------
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG------------------ 207 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 207 (502)
...+|+||++.|+|++|+.||+++|||+.|..|.+|+-.-...........+.-+....+..
T Consensus 45 llqtLKgHKDtVycVAys~dGkrFASG~aDK~VI~W~~klEG~LkYSH~D~IQCMsFNP~~h~LasCsLsdFglWS~~qK 124 (1081)
T KOG1538|consen 45 LLQPLKGHKDTVYCVAYAKDGKRFASGSADKSVIIWTSKLEGILKYSHNDAIQCMSFNPITHQLASCSLSDFGLWSPEQK 124 (1081)
T ss_pred cccccccccceEEEEEEccCCceeccCCCceeEEEecccccceeeeccCCeeeEeecCchHHHhhhcchhhccccChhhh
Confidence 45789999999999999999999999999999999975432222222222221111111000
Q ss_pred --ccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeec---CCCCCEEEEEecCCC-----CEEEEecCCCe
Q 010759 208 --RTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS---KHKGPIFSLKWNKKG-----DYLLTGSCDKT 277 (502)
Q Consensus 208 --~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~---~h~~~V~~l~~~~~~-----~~l~sgs~D~~ 277 (502)
.....+..|.+++|..||++|+.|-.+|+|.|-+..++....+. +...+|++++|+|.. ..++...+..+
T Consensus 125 ~V~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk~gEek~~I~Rpgg~Nspiwsi~~~p~sg~G~~di~aV~DW~qT 204 (1081)
T KOG1538|consen 125 SVSKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNKNGEEKVKIERPGGSNSPIWSICWNPSSGEGRNDILAVADWGQT 204 (1081)
T ss_pred hHHhhhhheeEEEeeecCCCcEEEEeccCceEEeecCCCCcceEEeCCCCCCCCceEEEecCCCCCCccceEEEEeccce
Confidence 00123456889999999999999999999999998776655544 477899999999964 46788888888
Q ss_pred EEEEeccCcceeEEeeecccCeEEEec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe
Q 010759 278 AIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS 356 (502)
Q Consensus 278 v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs 356 (502)
+.+|.+... .+..-..-.-...++.+ .+...+..++.|+.+.++... +..+.++......|+.++.+|+++.++.|+
T Consensus 205 LSFy~LsG~-~Igk~r~L~FdP~CisYf~NGEy~LiGGsdk~L~~fTR~-GvrLGTvg~~D~WIWtV~~~PNsQ~v~~GC 282 (1081)
T KOG1538|consen 205 LSFYQLSGK-QIGKDRALNFDPCCISYFTNGEYILLGGSDKQLSLFTRD-GVRLGTVGEQDSWIWTVQAKPNSQYVVVGC 282 (1081)
T ss_pred eEEEEecce-eecccccCCCCchhheeccCCcEEEEccCCCceEEEeec-CeEEeeccccceeEEEEEEccCCceEEEEE
Confidence 888887432 22211111112344544 456667788889988887653 344455555677899999999999999999
Q ss_pred CCCcEEEEeC
Q 010759 357 DDVTAKIWNM 366 (502)
Q Consensus 357 ~dg~i~iwd~ 366 (502)
.||+|-.|++
T Consensus 283 qDGTiACyNl 292 (1081)
T KOG1538|consen 283 QDGTIACYNL 292 (1081)
T ss_pred ccCeeehhhh
Confidence 9999999976
No 178
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.83 E-value=2.9e-18 Score=149.51 Aligned_cols=277 Identities=23% Similarity=0.415 Sum_probs=192.4
Q ss_pred cceeEEEECC--C-CCEEEEEeC----CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC--
Q 010759 155 SEVCACAWSP--A-GSLLASGSG----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-- 225 (502)
Q Consensus 155 ~~V~~~~~sp--d-~~~l~sgs~----D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-- 225 (502)
-.++++.||. + +-+||.||- .+.|.|-.+..... .......-.|..+++-+-|.|+.
T Consensus 45 ~~lya~~Ws~~~~~~~rla~gS~~Ee~~Nkvqiv~ld~~s~--------------e~~~~a~fd~~YP~tK~~wiPd~~g 110 (364)
T KOG0290|consen 45 WPLYAMNWSVRPDKKFRLAVGSFIEEYNNKVQIVQLDEDSG--------------ELVEDANFDHPYPVTKLMWIPDSKG 110 (364)
T ss_pred CceeeeccccCCCcceeEEEeeeccccCCeeEEEEEccCCC--------------ceeccCCCCCCCCccceEecCCccc
Confidence 3578899984 4 447888873 34555544431110 00011113467889999999976
Q ss_pred ---CEEEEEECCCcEEEEECCCc-----eeEee-----cCCCCCEEEEEecCC-CCEEEEecCCCeEEEEeccCcceeEE
Q 010759 226 ---TLLATGSYDGQARIWSTNGD-----LKCTL-----SKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 226 ---~~l~sg~~dg~i~iw~~~~~-----~~~~~-----~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
.+|++.+ -.+|+|.+..+ +...+ ..+..++++..|+.- -+++.++|-|.++.|||+.++..
T Consensus 111 ~~pdlLATs~--D~LRlWri~~ee~~~~~~~~L~~~kns~~~aPlTSFDWne~dp~~igtSSiDTTCTiWdie~~~~--- 185 (364)
T KOG0290|consen 111 VYPDLLATSS--DFLRLWRIGDEESRVELQSVLNNNKNSEFCAPLTSFDWNEVDPNLIGTSSIDTTCTIWDIETGVS--- 185 (364)
T ss_pred cCcchhhccc--CeEEEEeccCcCCceehhhhhccCcccccCCcccccccccCCcceeEeecccCeEEEEEEeeccc---
Confidence 3455543 58999987521 11122 235678999999874 46888999999999999987621
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~ 370 (502)
+ ..-..+-.|..+|..++|...+ ..||+.|.||.+|+||++...
T Consensus 186 -------------------------~----------~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~le 230 (364)
T KOG0290|consen 186 -------------------------G----------TVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLE 230 (364)
T ss_pred -------------------------c----------ceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccc
Confidence 0 0112345688899999998755 579999999999999998653
Q ss_pred e---eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCC-CE
Q 010759 371 Y---VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTG-EY 444 (502)
Q Consensus 371 ~---~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg-~~ 444 (502)
. +.+-.....+...++|++... .++|+-..| ..|.|.|++. ...+.++.+|.+.|+.|+|.|.. ..
T Consensus 231 HSTIIYE~p~~~~pLlRLswnkqDp--------nymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~h 302 (364)
T KOG0290|consen 231 HSTIIYEDPSPSTPLLRLSWNKQDP--------NYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSH 302 (364)
T ss_pred cceEEecCCCCCCcceeeccCcCCc--------hHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCce
Confidence 2 222222244666777776543 467775554 4689999985 46788999999999999999974 78
Q ss_pred EEEEeCCCcEEEEeCCCCe------eEEEEecCCCEEEEEECC-CCCEEEEEECCC
Q 010759 445 LASGSLDKSMHIWSLKEGK------IVKTYTGNGGIFEVCWNK-EGDKIAACFANH 493 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~~~~------~~~~~~~~~~i~~~~ws~-~g~~la~~~~~~ 493 (502)
|+|||+|..+.|||+..-- .+-.|...+.|+-++|++ .++.+|.|+.+.
T Consensus 303 ictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dwiai~~~kk 358 (364)
T KOG0290|consen 303 ICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDWIAICFGKK 358 (364)
T ss_pred eeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCEEEEEecCe
Confidence 9999999999999997522 233345566799999996 678999998763
No 179
>KOG0322 consensus G-protein beta subunit-like protein GNB1L, contains WD repeats [General function prediction only]
Probab=99.82 E-value=6.9e-19 Score=151.44 Aligned_cols=276 Identities=16% Similarity=0.237 Sum_probs=189.4
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-eeEeec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcce
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 288 (502)
++.+.|+++.|..+++ |++|..-|.|++|.+++. ....+. .|...|+.+.--|+ ..+.+-+.|..+.+|++.-...
T Consensus 12 p~~~~v~s~~fqa~~r-L~sg~~~G~V~~w~lqt~r~~~~~r~~g~~~it~lq~~p~-d~l~tqgRd~~L~lw~ia~s~~ 89 (323)
T KOG0322|consen 12 PHSSSVTSVLFQANER-LMSGLSVGIVKMWVLQTERDLPLIRLFGRLFITNLQSIPN-DSLDTQGRDPLLILWTIAYSAF 89 (323)
T ss_pred cccchheehhhccchh-hhcccccceEEEEEeecCccchhhhhhccceeeceeecCC-cchhhcCCCceEEEEEccCcce
Confidence 4678899999998876 889999999999998764 334555 56778999988887 6789999999999999876554
Q ss_pred eEEeeecccCeEEEecCC-------Cc--eEEEEcCCC--eEEEEEcCCCcceeee----cCCCcceeEEEEcCC-C--C
Q 010759 289 KQQFEFHSGPTLDVDWRN-------NV--SFATSSTDN--MIYVCKIGENRPIKTF----AGHQGEVNCVKWDPT-G--S 350 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~-------~~--~~~~~~~d~--~i~~~~~~~~~~~~~~----~~h~~~v~~v~~~p~-~--~ 350 (502)
+.. |.-++..+.|-. .. .+......+ .+.+-|......+... .+..+.+.|..+..+ + -
T Consensus 90 i~i---~Si~~nslgFCrfSl~~~~k~~eqll~yp~rgsde~h~~D~g~~tqv~i~dd~~~~Klgsvmc~~~~~~c~s~~ 166 (323)
T KOG0322|consen 90 ISI---HSIVVNSLGFCRFSLVKKPKNSEQLLEYPSRGSDETHKQDGGDTTQVQIADDSERSKLGSVMCQDKDHACGSTF 166 (323)
T ss_pred EEE---eeeeccccccccceeccCCCcchhheecCCcccchhhhhccCccceeEccCchhccccCceeeeeccccccceE
Confidence 332 222222222210 00 111110000 0111222211112111 134566777775332 3 2
Q ss_pred EEEEEeCCCcEEEEeCCCC----------ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-
Q 010759 351 LLASCSDDVTAKIWNMKQD----------KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL- 419 (502)
Q Consensus 351 ~l~sgs~dg~i~iwd~~~~----------~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~- 419 (502)
+++.|-++|.+.+||+.++ +.......|.+++.++.|.+.... =++|+.+..+..|.+.-
T Consensus 167 lllaGyEsghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~r---------Gisgga~dkl~~~Sl~~s 237 (323)
T KOG0322|consen 167 LLLAGYESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDR---------GISGGADDKLVMYSLNHS 237 (323)
T ss_pred EEEEeccCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcC---------CcCCCccccceeeeeccc
Confidence 4678889999999999887 333444568889999988764331 24567777788887753
Q ss_pred -CeEE--EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeE
Q 010759 420 -GKLL--YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 420 -~~~~--~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
+.+. .++.--.-.|..+...||++.+||+|+|++|+||+.++...+..+.- ..+|++++|+|+-..+|+++.|++|
T Consensus 238 ~gslq~~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rI 317 (323)
T KOG0322|consen 238 TGSLQIRKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARI 317 (323)
T ss_pred cCcccccceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceE
Confidence 3221 12222234688999999999999999999999999999988877754 4679999999999999999999999
Q ss_pred EEEEe
Q 010759 496 CVLDF 500 (502)
Q Consensus 496 ~v~~~ 500 (502)
.+|++
T Consensus 318 SLWkL 322 (323)
T KOG0322|consen 318 SLWKL 322 (323)
T ss_pred Eeeec
Confidence 99986
No 180
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.82 E-value=1.3e-18 Score=157.64 Aligned_cols=209 Identities=20% Similarity=0.452 Sum_probs=170.1
Q ss_pred eecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC
Q 010759 249 TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN 327 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~ 327 (502)
.+.+|+++|..++|+|-+ +.|+|||.|.+|.||.+..+..... ..
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~----------------------------------lt 121 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRD----------------------------------LT 121 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccC----------------------------------cc
Confidence 567999999999999965 5689999999999999865432211 12
Q ss_pred cceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE
Q 010759 328 RPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA 406 (502)
Q Consensus 328 ~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg 406 (502)
.|+..+.||...|--|+|||.- +.|+|++.|.+|.||++.++..+.++. |...|+++.|+.+|+ +|++.
T Consensus 122 epvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs---------~l~Tt 191 (472)
T KOG0303|consen 122 EPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGS---------LLCTT 191 (472)
T ss_pred cceEEEeecceeEEEEeecccchhhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCc---------eeeee
Confidence 5677889999999999999974 678999999999999999999888887 999999999999997 89999
Q ss_pred eCCCeEEEEeCCCCeEEEEeeCCCCC-EEEEEECCCCCEEEEE---eCCCcEEEEeCCCC---eeEEEEecCCCEEEEEE
Q 010759 407 SFDSTVKLWDVELGKLLYSLNGHREP-VYSLAFSPTGEYLASG---SLDKSMHIWSLKEG---KIVKTYTGNGGIFEVCW 479 (502)
Q Consensus 407 s~dg~i~iwd~~~~~~~~~~~~h~~~-v~~l~~spdg~~lasg---s~Dg~i~iw~~~~~---~~~~~~~~~~~i~~~~w 479 (502)
+.|..|||||.++++.+.+-.+|.+. -..+.|-.+|.++-|| ..+..+-+|+..+- -.+..+....+|.-.=|
T Consensus 192 ckDKkvRv~dpr~~~~v~e~~~heG~k~~Raifl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDtSnGvl~PFy 271 (472)
T KOG0303|consen 192 CKDKKVRVIDPRRGTVVSEGVAHEGAKPARAIFLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDTSNGVLLPFY 271 (472)
T ss_pred cccceeEEEcCCCCcEeeecccccCCCcceeEEeccCceeeeccccccccceeccCcccccCcceeEEeccCCceEEeee
Confidence 99999999999999999998888753 3456677888844443 23678999997653 34566666777877789
Q ss_pred CCCCCEEEEE-ECCCeEEEEEee
Q 010759 480 NKEGDKIAAC-FANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~-~~~~~v~v~~~~ 501 (502)
.||.+.+..| -.|+.|+.|.+.
T Consensus 272 D~dt~ivYl~GKGD~~IRYyEit 294 (472)
T KOG0303|consen 272 DPDTSIVYLCGKGDSSIRYFEIT 294 (472)
T ss_pred cCCCCEEEEEecCCcceEEEEec
Confidence 9999877655 458899998764
No 181
>KOG1034 consensus Transcriptional repressor EED/ESC/FIE, required for transcriptional silencing, WD repeat superfamily [Transcription]
Probab=99.82 E-value=3.6e-19 Score=157.69 Aligned_cols=267 Identities=20% Similarity=0.376 Sum_probs=188.6
Q ss_pred cccceeEEEECCC----CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC-CE
Q 010759 153 HTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TL 227 (502)
Q Consensus 153 H~~~V~~~~~spd----~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-~~ 227 (502)
|.-.-+.|+|+-+ ..+||.||.-|.|||-|+.++.. .+.+.+|...|..+.++|+. ++
T Consensus 88 ~~Esfytcsw~yd~~~~~p~la~~G~~GvIrVid~~~~~~-----------------~~~~~ghG~sINeik~~p~~~ql 150 (385)
T KOG1034|consen 88 HDESFYTCSWSYDSNTGNPFLAAGGYLGVIRVIDVVSGQC-----------------SKNYRGHGGSINEIKFHPDRPQL 150 (385)
T ss_pred CCcceEEEEEEecCCCCCeeEEeecceeEEEEEecchhhh-----------------ccceeccCccchhhhcCCCCCcE
Confidence 6667788899765 34899999999999999876542 23445667889999999964 79
Q ss_pred EEEEECCCcEEEEECCCce-eEee---cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 228 LATGSYDGQARIWSTNGDL-KCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~~-~~~~---~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+++++.|..||+|+++... +..| .+|.+.|.++.|+++|.+|+||+.|.++++|++...+....++.. +.
T Consensus 151 vls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~gd~i~ScGmDhslk~W~l~~~~f~~~lE~s------~~ 224 (385)
T KOG1034|consen 151 VLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLDGDRIASCGMDHSLKLWRLNVKEFKNKLELS------IT 224 (385)
T ss_pred EEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCCCCeeeccCCcceEEEEecChhHHhhhhhhh------cc
Confidence 9999999999999998653 3343 579999999999999999999999999999999866544333221 11
Q ss_pred cCCCceEEEEcCCCeEEEEE-cCCCccee-eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeC-CCCc----------
Q 010759 304 WRNNVSFATSSTDNMIYVCK-IGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM-KQDK---------- 370 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~-~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~-~~~~---------- 370 (502)
|.++ ++.+-+- .....|.. +-.-|...|.|+.|- |.++++=|-++.|.+|.. +-+.
T Consensus 225 ~~~~---------~t~~pfpt~~~~fp~fst~diHrnyVDCvrw~--gd~ilSkscenaI~~w~pgkl~e~~~~vkp~es 293 (385)
T KOG1034|consen 225 YSPN---------KTTRPFPTPKTHFPDFSTTDIHRNYVDCVRWF--GDFILSKSCENAIVCWKPGKLEESIHNVKPPES 293 (385)
T ss_pred cCCC---------CccCcCCccccccccccccccccchHHHHHHH--hhheeecccCceEEEEecchhhhhhhccCCCcc
Confidence 1111 0000000 00001111 223588999999996 688999999999999976 1111
Q ss_pred ---eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE--EEeeC--CCCCEEEEEECCCCC
Q 010759 371 ---YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL--YSLNG--HREPVYSLAFSPTGE 443 (502)
Q Consensus 371 ---~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~--h~~~v~~l~~spdg~ 443 (502)
.+.++......|+-+.|+-+-. +.+||.|...|.|.+||+++..+. .++.. ....|...+||.||.
T Consensus 294 ~~Ti~~~~~~~~c~iWfirf~~d~~-------~~~la~gnq~g~v~vwdL~~~ep~~~ttl~~s~~~~tVRQ~sfS~dgs 366 (385)
T KOG1034|consen 294 ATTILGEFDYPMCDIWFIRFAFDPW-------QKMLALGNQSGKVYVWDLDNNEPPKCTTLTHSKSGSTVRQTSFSRDGS 366 (385)
T ss_pred ceeeeeEeccCccceEEEEEeecHH-------HHHHhhccCCCcEEEEECCCCCCccCceEEeccccceeeeeeecccCc
Confidence 1223333445566665554322 126888999999999999976652 22222 235689999999999
Q ss_pred EEEEEeCCCcEEEEeCC
Q 010759 444 YLASGSLDKSMHIWSLK 460 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~ 460 (502)
+|+....|++|.-||..
T Consensus 367 ~lv~vcdd~~Vwrwdrv 383 (385)
T KOG1034|consen 367 ILVLVCDDGTVWRWDRV 383 (385)
T ss_pred EEEEEeCCCcEEEEEee
Confidence 99999999999999864
No 182
>KOG1963 consensus WD40 repeat protein [General function prediction only]
Probab=99.82 E-value=5.1e-18 Score=168.67 Aligned_cols=328 Identities=19% Similarity=0.257 Sum_probs=218.5
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
.|+-.++|.++||.++++|+|-.||.|.+|.=... ...... . ....-|...|.+++|+++|.+|+||
T Consensus 203 ~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~-~~~~~t--------~----t~lHWH~~~V~~L~fS~~G~~LlSG 269 (792)
T KOG1963|consen 203 HHTFNITCVALSPNERYLAAGDSDGRILVWRDFGS-SDDSET--------C----TLLHWHHDEVNSLSFSSDGAYLLSG 269 (792)
T ss_pred hhcccceeEEeccccceEEEeccCCcEEEEecccc-cccccc--------c----eEEEecccccceeEEecCCceEeec
Confidence 57778999999999999999999999999963221 000000 0 1112356789999999999999999
Q ss_pred ECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC-----------eE
Q 010759 232 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-----------TL 300 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-----------~~ 300 (502)
|..|.+-+|.........+..-.++|..+.++|++++.+....|..|.+-...+.+....+.+-..+ ..
T Consensus 270 G~E~VLv~Wq~~T~~kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t 349 (792)
T KOG1963|consen 270 GREGVLVLWQLETGKKQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTT 349 (792)
T ss_pred ccceEEEEEeecCCCcccccccCCeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccce
Confidence 9999999999887767778888999999999999999999999999999987666544433322211 12
Q ss_pred EEecCC-CceEEEEcCCCeEEEEEcCCCcceeeec-----CC------CcceeEEEEcCCCCEEEEEe--------CCC-
Q 010759 301 DVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFA-----GH------QGEVNCVKWDPTGSLLASCS--------DDV- 359 (502)
Q Consensus 301 ~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~-----~h------~~~v~~v~~~p~~~~l~sgs--------~dg- 359 (502)
.+...+ ...++..+..+.|..|++-+...+..+. .+ .-.+++++.+..|.+++|.- .||
T Consensus 350 ~~~idpr~~~~vln~~~g~vQ~ydl~td~~i~~~~v~~~n~~~~~~n~~v~itav~~~~~gs~maT~E~~~d~~~~~~~e 429 (792)
T KOG1963|consen 350 GVSIDPRTNSLVLNGHPGHVQFYDLYTDSTIYKLQVCDENYSDGDVNIQVGITAVARSRFGSWMATLEARIDKFNFFDGE 429 (792)
T ss_pred eEEEcCCCCceeecCCCceEEEEeccccceeeeEEEEeecccCCcceeEEeeeeehhhccceEEEEeeeeehhhhccCce
Confidence 222222 3445666777888888887766554332 11 23467788888899988863 333
Q ss_pred -cEEEEeCCCCc----eeeec-ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC------C----eEE
Q 010759 360 -TAKIWNMKQDK----YVHDL-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL------G----KLL 423 (502)
Q Consensus 360 -~i~iwd~~~~~----~~~~~-~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~------~----~~~ 423 (502)
.+++|-..... +...+ ..|...+...++.+..+. ...++++.||.++||-+.. . .+.
T Consensus 430 ~~LKFW~~n~~~kt~~L~T~I~~PH~~~~vat~~~~~~rs-------~~~vta~~dg~~KiW~~~~~~n~~k~~s~W~c~ 502 (792)
T KOG1963|consen 430 VSLKFWQYNPNSKTFILNTKINNPHGNAFVATIFLNPTRS-------VRCVTASVDGDFKIWVFTDDSNIYKKSSNWTCK 502 (792)
T ss_pred EEEEEEEEcCCcceeEEEEEEecCCCceeEEEEEecCccc-------ceeEEeccCCeEEEEEEecccccCcCccceEEe
Confidence 46788654332 22222 245555555555443321 1578999999999998732 2 222
Q ss_pred EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC-CeeEEEEec-CCCEEEEEECCCC--CEEEEEECCCeEEEEE
Q 010759 424 YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE-GKIVKTYTG-NGGIFEVCWNKEG--DKIAACFANHTVCVLD 499 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~-~~~~~~~~~-~~~i~~~~ws~~g--~~la~~~~~~~v~v~~ 499 (502)
..-.-|..++++++|+.||.. +++|.|++|.+||..+ ..+..+... +..+.++++.... +..+.......+.+||
T Consensus 503 ~i~sy~k~~i~a~~fs~dGsl-la~s~~~~Itiwd~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~WN 581 (792)
T KOG1963|consen 503 AIGSYHKTPITALCFSQDGSL-LAVSFDDTITIWDYDTKNELLCTEGSRNWPIAELLFTAQTQNDGALVHATQQRLSVWN 581 (792)
T ss_pred eeeccccCcccchhhcCCCcE-EEEecCCEEEEecCCChhhhhccccccccchHhHhhhcccccccceeeccCceEehHh
Confidence 222237889999999999965 5567788999999988 444443322 2234444444422 2333334456677777
Q ss_pred e
Q 010759 500 F 500 (502)
Q Consensus 500 ~ 500 (502)
+
T Consensus 582 l 582 (792)
T KOG1963|consen 582 L 582 (792)
T ss_pred h
Confidence 5
No 183
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.81 E-value=9.1e-18 Score=169.14 Aligned_cols=283 Identities=22% Similarity=0.359 Sum_probs=197.8
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CCCEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EGTLLATG 231 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~~~l~sg 231 (502)
..+-..+.|+|-...++++...-.|++||...+....+..++. .....|+.+.+-. |..++++|
T Consensus 1064 ~~~pk~~~~hpf~p~i~~ad~r~~i~vwd~e~~~~l~~F~n~~--------------~~~t~Vs~l~liNe~D~aLlLta 1129 (1387)
T KOG1517|consen 1064 NQPPKTLKFHPFEPQIAAADDRERIRVWDWEKGRLLNGFDNGA--------------FPDTRVSDLELINEQDDALLLTA 1129 (1387)
T ss_pred CCCCceeeecCCCceeEEcCCcceEEEEecccCceeccccCCC--------------CCCCccceeeeecccchhheeee
Confidence 3355677899988889999878899999998876543333221 2245688888754 55789999
Q ss_pred ECCCcEEEEECCC------ceeEee---cC----CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 232 SYDGQARIWSTNG------DLKCTL---SK----HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 232 ~~dg~i~iw~~~~------~~~~~~---~~----h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
+.||.||||+-.. +++... .+ -.+.-.-+.|.....+|++++.-+.|+|||+....+...+..
T Consensus 1130 s~dGvIRIwk~y~~~~~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~tGd~r~IRIWDa~~E~~~~diP~---- 1205 (1387)
T KOG1517|consen 1130 SSDGVIRIWKDYADKWKKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVTGDVRSIRIWDAHKEQVVADIPY---- 1205 (1387)
T ss_pred ccCceEEEecccccccCCceeEEeeccccccCccCCCCCeeeehhhhCCeEEecCCeeEEEEEecccceeEeeccc----
Confidence 9999999997421 111111 11 111113456776666666666677788888765543332211
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCC---ceeee
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQD---KYVHD 374 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~sgs~dg~i~iwd~~~~---~~~~~ 374 (502)
+....|+++.-+ +.|+.|+.|-.||.||+||.+.. ..+..
T Consensus 1206 ------------------------------------~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~ 1249 (1387)
T KOG1517|consen 1206 ------------------------------------GSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCV 1249 (1387)
T ss_pred ------------------------------------CCCccceeecccccCCceEEEeecCCceEEeecccCCcccccee
Confidence 112234444332 23789999999999999998753 34666
Q ss_pred cccCCCc--EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCC--C-CEEEEEECCCCCEEEE
Q 010759 375 LREHSKE--IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHR--E-PVYSLAFSPTGEYLAS 447 (502)
Q Consensus 375 ~~~~~~~--i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~--~-~v~~l~~spdg~~las 447 (502)
.+.|... |..+.+.+.|-. -|++|+.||.|++||++.... ..++..|. + ..+++..+++...+|+
T Consensus 1250 ~R~h~~~~~Iv~~slq~~G~~--------elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAs 1321 (1387)
T KOG1517|consen 1250 YREHNDVEPIVHLSLQRQGLG--------ELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIAS 1321 (1387)
T ss_pred ecccCCcccceeEEeecCCCc--------ceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeee
Confidence 7788877 999999887753 388999999999999997422 22344444 3 4899999999999999
Q ss_pred EeCCCcEEEEeCCCCeeEEEEec--------CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 448 GSLDKSMHIWSLKEGKIVKTYTG--------NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~~~~~--------~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
|+. +.|+||++.... +..+.. .+.+.+++|||---+||+|+.|.+|.||..
T Consensus 1322 Gs~-q~ikIy~~~G~~-l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~ 1380 (1387)
T KOG1517|consen 1322 GSA-QLIKIYSLSGEQ-LNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSC 1380 (1387)
T ss_pred cCc-ceEEEEecChhh-hcccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeec
Confidence 999 999999987433 333221 345789999999999999999999999964
No 184
>KOG1524 consensus WD40 repeat-containing protein CHE-2 [General function prediction only]
Probab=99.81 E-value=2.9e-18 Score=160.95 Aligned_cols=262 Identities=18% Similarity=0.315 Sum_probs=188.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEE--------ecCCCCEEEEecCCCeEEEEe
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLK--------WNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~--------~~~~~~~l~sgs~D~~v~iwd 282 (502)
.+..-|.|+.|+.....+.+++.+..+.-|+........+.....-|...- =-.....|+.+++||.+.+.+
T Consensus 12 r~~e~vc~v~w~~~eei~~~~dDh~~~~~~~~~~~s~~~~~~p~df~pt~~h~~~rs~~~g~~~d~~~i~s~DGkf~il~ 91 (737)
T KOG1524|consen 12 RNSEKVCCVDWSSNEEIYFVSDDHQIFKWSDVSRDSVEVAKLPDDFVPTDMHLGGRSSGGGKGSDTLLICSNDGRFVILN 91 (737)
T ss_pred ccceeEEeecccccceEEEeccCceEEEeecccchhhhhhhCCcccCCccccccccccCCCCCcceEEEEcCCceEEEec
Confidence 345567899999987777666555444445543322211111111111100 011335799999999999987
Q ss_pred ccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
+.++.......|.+.+.+..|.. ...+++++.||.|.+|.... ....++.....+|.|++|.|+.+.++-|-. +.+
T Consensus 92 -k~~rVE~sv~AH~~A~~~gRW~~dGtgLlt~GEDG~iKiWSrsG-MLRStl~Q~~~~v~c~~W~p~S~~vl~c~g-~h~ 168 (737)
T KOG1524|consen 92 -KSARVERSISAHAAAISSGRWSPDGAGLLTAGEDGVIKIWSRSG-MLRSTVVQNEESIRCARWAPNSNSIVFCQG-GHI 168 (737)
T ss_pred -ccchhhhhhhhhhhhhhhcccCCCCceeeeecCCceEEEEeccc-hHHHHHhhcCceeEEEEECCCCCceEEecC-CeE
Confidence 56667777888999999999964 56788999999999998643 223344445678999999999877665543 456
Q ss_pred EEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 362 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 362 ~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
.|=-+....-+-..++|.+-|.++.|+|... ++++|+.|-..++||.. |..++.-..|.-+|++++|.|+
T Consensus 169 ~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~---------lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd 238 (737)
T KOG1524|consen 169 SIKPLAANSKIIRWRAHDGLVLSLSWSTQSN---------IIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPE 238 (737)
T ss_pred EEeecccccceeEEeccCcEEEEeecCcccc---------ceeecCCceeEEeeccc-CcccccCChhccceeeeeeccc
Confidence 6656655555666789999999999999875 89999999999999976 7888888889999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 442 GEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
..++.+|.. ++++ .-+.-+.|+.++||+||..++.|...|.|.+
T Consensus 239 -~~~~v~S~n-t~R~----------~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~ 282 (737)
T KOG1524|consen 239 -KDYLLWSYN-TARF----------SSPRVGSIFNLSWSADGTQATCGTSTGQLIV 282 (737)
T ss_pred -cceeeeeee-eeee----------cCCCccceEEEEEcCCCceeeccccCceEEE
Confidence 666666643 2331 1123467999999999999999999998755
No 185
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.81 E-value=1.7e-16 Score=153.58 Aligned_cols=270 Identities=14% Similarity=0.222 Sum_probs=171.6
Q ss_pred EEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE-CCCcEEEEECCCc-ee
Q 010759 170 ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-YDGQARIWSTNGD-LK 247 (502)
Q Consensus 170 ~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~-~dg~i~iw~~~~~-~~ 247 (502)
++.+.|+.|.+|++.+... + ..++.+. .......++++|++++|++++ .++.|.+|+.... ..
T Consensus 6 ~~~~~~~~I~~~~~~~~g~--------l--~~~~~~~-----~~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~l 70 (330)
T PRK11028 6 IASPESQQIHVWNLNHEGA--------L--TLLQVVD-----VPGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGAL 70 (330)
T ss_pred EEcCCCCCEEEEEECCCCc--------e--eeeeEEe-----cCCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCce
Confidence 3446789999999853211 1 1112211 123466789999999987765 4788999987532 11
Q ss_pred Eee--cCCCCCEEEEEecCCCCEEEEec-CCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEc
Q 010759 248 CTL--SKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKI 324 (502)
Q Consensus 248 ~~~--~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~ 324 (502)
... ....+....+.|+|++++|++++ .++.|.+|++.+......
T Consensus 71 ~~~~~~~~~~~p~~i~~~~~g~~l~v~~~~~~~v~v~~~~~~g~~~~--------------------------------- 117 (330)
T PRK11028 71 TFAAESPLPGSPTHISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA--------------------------------- 117 (330)
T ss_pred EEeeeecCCCCceEEEECCCCCEEEEEEcCCCeEEEEEECCCCCCCC---------------------------------
Confidence 111 11233557899999999888776 488999998853211000
Q ss_pred CCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCCcEEEEeCCCCceeee-----cc-cCCCcEEEEEEccCCCCCCCC
Q 010759 325 GENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQDKYVHD-----LR-EHSKEIYTIRWSPTGSGTNNP 397 (502)
Q Consensus 325 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg~i~iwd~~~~~~~~~-----~~-~~~~~i~~~~~sp~g~~~~~~ 397 (502)
.+..+.+ .....+++++|++++++ +...++.|.+||+.+...+.. .. ........+.|+|++.
T Consensus 118 ----~~~~~~~-~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~p~~~~~~pdg~----- 187 (330)
T PRK11028 118 ----PIQIIEG-LEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAGPRHMVFHPNQQ----- 187 (330)
T ss_pred ----ceeeccC-CCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCCCceEEECCCCC-----
Confidence 0011111 12345688999998875 555679999999976432211 11 1123456789999886
Q ss_pred CCcEEEEEEe-CCCeEEEEeCCC--C--eEEEEeeCC------CCCEEEEEECCCCCEEEEEeC-CCcEEEEeCCCC---
Q 010759 398 NQQLILASAS-FDSTVKLWDVEL--G--KLLYSLNGH------REPVYSLAFSPTGEYLASGSL-DKSMHIWSLKEG--- 462 (502)
Q Consensus 398 ~~~~~l~sgs-~dg~i~iwd~~~--~--~~~~~~~~h------~~~v~~l~~spdg~~lasgs~-Dg~i~iw~~~~~--- 462 (502)
+++++. .++.|.+|++.. + +.+..+..+ ......+.|+|+|++|+++.. ++.|.+|++...
T Consensus 188 ----~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~pdg~~lyv~~~~~~~I~v~~i~~~~~~ 263 (330)
T PRK11028 188 ----YAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITPDGRHLYACDRTASLISVFSVSEDGSV 263 (330)
T ss_pred ----EEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECCCCCEEEEecCCCCeEEEEEEeCCCCe
Confidence 444444 489999999973 3 334443321 112346899999999988754 789999998542
Q ss_pred -eeEEEEecCCCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 463 -KIVKTYTGNGGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 463 -~~~~~~~~~~~i~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
+++...........++|+|+|++|+++.. +++|.||++.
T Consensus 264 ~~~~~~~~~~~~p~~~~~~~dg~~l~va~~~~~~v~v~~~~ 304 (330)
T PRK11028 264 LSFEGHQPTETQPRGFNIDHSGKYLIAAGQKSHHISVYEID 304 (330)
T ss_pred EEEeEEEeccccCCceEECCCCCEEEEEEccCCcEEEEEEc
Confidence 23333333234568899999999998765 8899999763
No 186
>KOG1587 consensus Cytoplasmic dynein intermediate chain [Cytoskeleton]
Probab=99.80 E-value=4.5e-17 Score=161.74 Aligned_cols=257 Identities=20% Similarity=0.291 Sum_probs=187.1
Q ss_pred CcEEEEECCCceeE-eecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcce--eE----EeeecccCeEEEecCC
Q 010759 235 GQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEW--KQ----QFEFHSGPTLDVDWRN 306 (502)
Q Consensus 235 g~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~--~~----~~~~~~~~~~~~~~~~ 306 (502)
+.+.||++...... ....-..+|++++|+|.. +.++.|..+|.|.+||++.+.. .. ....|..++..+.|..
T Consensus 222 ~~~~vW~~~~p~~Pe~~~~~~s~v~~~~f~p~~p~ll~gG~y~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~ 301 (555)
T KOG1587|consen 222 GVLLVWSLKNPNTPELVLESPSEVTCLKFCPFDPNLLAGGCYNGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQ 301 (555)
T ss_pred ceEEEEecCCCCCceEEEecCCceeEEEeccCCcceEEeeccCceEEEEEccCCCCCCCcccccccccCCcCeEEEEEec
Confidence 47899998654221 122245789999999965 5678888999999999987664 22 2245778888888852
Q ss_pred ---CceEEEEcCCCeEEEEEcCCCcc-eeee----cC-------CCcceeEEEEcCCC-CEEEEEeCCCcEEEEe---CC
Q 010759 307 ---NVSFATSSTDNMIYVCKIGENRP-IKTF----AG-------HQGEVNCVKWDPTG-SLLASCSDDVTAKIWN---MK 367 (502)
Q Consensus 307 ---~~~~~~~~~d~~i~~~~~~~~~~-~~~~----~~-------h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd---~~ 367 (502)
+..|++++.||.|..|+++.-.. .... .. -...+++++|.+.. ..|+.|+++|.|.--. .+
T Consensus 302 ~~~~~~f~s~ssDG~i~~W~~~~l~~P~e~~~~~~~~~~~~~~~~~~~~t~~~F~~~~p~~FiVGTe~G~v~~~~r~g~~ 381 (555)
T KOG1587|consen 302 NEHNTEFFSLSSDGSICSWDTDMLSLPVEGLLLESKKHKGQQSSKAVGATSLKFEPTDPNHFIVGTEEGKVYKGCRKGYT 381 (555)
T ss_pred cCCCCceEEEecCCcEeeeeccccccchhhcccccccccccccccccceeeEeeccCCCceEEEEcCCcEEEEEeccCCc
Confidence 24589999999999998764321 1110 11 12357899998854 5688999999987632 22
Q ss_pred CCc-----eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEEEEECCC
Q 010759 368 QDK-----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 368 ~~~-----~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spd 441 (502)
... .+..+..|.++|+++.++|-+. .++++++ |.+|+||... ...+++.+..+...|++++|||.
T Consensus 382 ~~~~~~~~~~~~~~~h~g~v~~v~~nPF~~--------k~fls~g-DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSpt 452 (555)
T KOG1587|consen 382 PAPEVSYKGHSTFITHIGPVYAVSRNPFYP--------KNFLSVG-DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPT 452 (555)
T ss_pred ccccccccccccccccCcceEeeecCCCcc--------ceeeeec-cceeEeccccCCCCcchhhhhccceeeeeEEcCc
Confidence 221 2335567889999999999875 2445554 9999999988 77788888888888999999998
Q ss_pred CC-EEEEEeCCCcEEEEeCCCCee--EEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 442 GE-YLASGSLDKSMHIWSLKEGKI--VKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 442 g~-~lasgs~Dg~i~iw~~~~~~~--~~~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.. .+|++..||.|.|||+..... +.+.. +....+.+.|++.|+.||.|..+|++++|++
T Consensus 453 rpavF~~~d~~G~l~iWDLl~~~~~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l 515 (555)
T KOG1587|consen 453 RPAVFATVDGDGNLDIWDLLQDDEEPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKL 515 (555)
T ss_pred CceEEEEEcCCCceehhhhhccccCCcccccccccccceeecCCCCcEEEEecCCCcEEEEEc
Confidence 74 567888899999999975432 22221 2344678889999999999999999999987
No 187
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.79 E-value=1.2e-17 Score=148.88 Aligned_cols=265 Identities=15% Similarity=0.244 Sum_probs=185.9
Q ss_pred CEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecC--CCCEEEEecCCCeEEEEeccCcceeEEeee--cc-cCe
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--HS-GPT 299 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--~~-~~~ 299 (502)
..++++...|.|++||.. ++....|.+|...+..++|.. ..+.+++|+.||+|++||+++......+.. +. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 568888899999999976 456668889999999999977 567899999999999999998765544433 33 234
Q ss_pred EEEecCCCce-EEEE----cCCCeEEEEEcCCCcc-eee-ecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCc-
Q 010759 300 LDVDWRNNVS-FATS----STDNMIYVCKIGENRP-IKT-FAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDK- 370 (502)
Q Consensus 300 ~~~~~~~~~~-~~~~----~~d~~i~~~~~~~~~~-~~~-~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~- 370 (502)
.+++..-+.. ++.+ ..+..+.+||++..+. +.. +..|...|++++|+|.. ++|+|||-||-|.|||++...
T Consensus 121 ~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~E 200 (376)
T KOG1188|consen 121 ICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNE 200 (376)
T ss_pred eEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEEeeecCCCcc
Confidence 5555542333 3333 3467899999998765 544 35799999999999964 789999999999999987552
Q ss_pred --eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-------------CCCEEE
Q 010759 371 --YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-------------REPVYS 435 (502)
Q Consensus 371 --~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~ 435 (502)
.+.....+...|..+.|...+.. -|.+-++..+..+|++..+.+...+..- .--|.+
T Consensus 201 eDaL~~viN~~sSI~~igw~~~~yk--------rI~clTH~Etf~~~ele~~~~~~~~~~~~~~~~d~r~~~~~dY~I~~ 272 (376)
T KOG1188|consen 201 EDALLHVINHGSSIHLIGWLSKKYK--------RIMCLTHMETFAIYELEDGSEETWLENPDVSADDLRKEDNCDYVINE 272 (376)
T ss_pred hhhHHHhhcccceeeeeeeecCCcc--------eEEEEEccCceeEEEccCCChhhcccCccchhhhHHhhhhhhheeec
Confidence 22333456778999999877631 3566778999999999887754433211 011221
Q ss_pred EEECCCCCEEEEEeC-CCcEEEEeCC---CCee---EEEEecC--CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 436 LAFSPTGEYLASGSL-DKSMHIWSLK---EGKI---VKTYTGN--GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 436 l~~spdg~~lasgs~-Dg~i~iw~~~---~~~~---~~~~~~~--~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
. ...++.+++.++. -+...++-+. ++.. +..+.+. ..|.++.|...+..+.+|+.||.+.+|-
T Consensus 273 ~-~~~~~~~~~l~g~~~n~~~~~~~~~~~s~~~~~~~a~l~g~~~eiVR~i~~~~~~~~l~TGGEDG~l~~Wk 344 (376)
T KOG1188|consen 273 H-SPGDKDTCALAGTDSNKGTIFPLVDTSSGSLLTEPAILQGGHEEIVRDILFDVKNDVLYTGGEDGLLQAWK 344 (376)
T ss_pred c-cCCCcceEEEeccccCceeEEEeeecccccccCccccccCCcHHHHHHHhhhcccceeeccCCCceEEEEe
Confidence 1 2234455665555 4555555443 3332 3333332 2367899999999999999999999995
No 188
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.79 E-value=2.1e-17 Score=146.27 Aligned_cols=231 Identities=24% Similarity=0.406 Sum_probs=180.9
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEec-cCcc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV-KTEE 287 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~-~~~~ 287 (502)
..+|+|.+|++|+..++.+-....|.||...+. ...++..|...|++|.|+|..+.|++|+.|+.-++|.. ..++
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~~ 89 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGGT 89 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCCe
Confidence 467999999999999999999999999987543 45678899999999999999999999999999999987 4444
Q ss_pred eeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 288 WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
|.. ...+..++..+++|.|+|.++.||+||.-..|.||-+.
T Consensus 90 Wkp---------------------------------------tlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E 130 (361)
T KOG1523|consen 90 WKP---------------------------------------TLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYE 130 (361)
T ss_pred ecc---------------------------------------ceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEe
Confidence 432 33444567789999999999999999999999999776
Q ss_pred CCce--e--eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC------------------CeEEEE
Q 010759 368 QDKY--V--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL------------------GKLLYS 425 (502)
Q Consensus 368 ~~~~--~--~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~------------------~~~~~~ 425 (502)
...- + +.-+.+...|.++.|+|++. +|+.||.|+..|+|..-. |+++.+
T Consensus 131 ~ENdWWVsKhikkPirStv~sldWhpnnV---------LlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~lm~E 201 (361)
T KOG1523|consen 131 QENDWWVSKHIKKPIRSTVTSLDWHPNNV---------LLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQLMSE 201 (361)
T ss_pred cccceehhhhhCCccccceeeeeccCCcc---------eecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHHHHh
Confidence 4321 1 11234567899999999885 789999999999986321 233344
Q ss_pred eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe-eEEEE-ecCCCEEEEEECCCCCEEEEEEC
Q 010759 426 LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK-IVKTY-TGNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 426 ~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~-~~~~~-~~~~~i~~~~ws~~g~~la~~~~ 491 (502)
+....+.|..+.|+|+|..|+=.+.|..|.+=|..... .+.+. ...-+..++.|-.+...+++|..
T Consensus 202 ~~~~ggwvh~v~fs~sG~~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise~~vv~ag~~ 269 (361)
T KOG1523|consen 202 ASSSGGWVHGVLFSPSGNRLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISENSVVAAGYD 269 (361)
T ss_pred hccCCCceeeeEeCCCCCEeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecCCceeecCCC
Confidence 44456789999999999999999999999999987653 33333 22345678888777766666654
No 189
>KOG0303 consensus Actin-binding protein Coronin, contains WD40 repeats [Cytoskeleton]
Probab=99.78 E-value=1.3e-17 Score=151.17 Aligned_cols=211 Identities=20% Similarity=0.365 Sum_probs=153.8
Q ss_pred eeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC-C
Q 010759 148 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-G 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-~ 225 (502)
-...||+++|..++|+| +...|||||.|.+|+||.+..+....... .| .....+|...|-.++|+|. .
T Consensus 75 P~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~lt-ep---------vv~L~gH~rrVg~V~wHPtA~ 144 (472)
T KOG0303|consen 75 PLVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLT-EP---------VVELYGHQRRVGLVQWHPTAP 144 (472)
T ss_pred CCccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcc-cc---------eEEEeecceeEEEEeecccch
Confidence 35789999999999999 57899999999999999987653221111 11 1122346778999999995 4
Q ss_pred CEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC-eEEEe
Q 010759 226 TLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVD 303 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~ 303 (502)
+.|+|++.|.+|.+|+.... ...++. |..-|+++.|+.+|.+|++.+.|+.|||||.++++.+..-..|.+. ..-.-
T Consensus 145 NVLlsag~Dn~v~iWnv~tgeali~l~-hpd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~~~heG~k~~Rai 223 (472)
T KOG0303|consen 145 NVLLSAGSDNTVSIWNVGTGEALITLD-HPDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEGVAHEGAKPARAI 223 (472)
T ss_pred hhHhhccCCceEEEEeccCCceeeecC-CCCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeecccccCCCcceeE
Confidence 78999999999999998754 344555 9999999999999999999999999999999999988877666653 22233
Q ss_pred cCCCceEEEEc----CCCeEEEEEcCCC-cc--eeeecCCCcceeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCc
Q 010759 304 WRNNVSFATSS----TDNMIYVCKIGEN-RP--IKTFAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDK 370 (502)
Q Consensus 304 ~~~~~~~~~~~----~d~~i~~~~~~~~-~~--~~~~~~h~~~v~~v~~~p~~~~l~sg-s~dg~i~iwd~~~~~ 370 (502)
|..+..+++.+ .+..+-+|+-..- .| ...+.. .+.|.---|.+|.++++.+ -.|+.||.|.+....
T Consensus 224 fl~~g~i~tTGfsr~seRq~aLwdp~nl~eP~~~~elDt-SnGvl~PFyD~dt~ivYl~GKGD~~IRYyEit~d~ 297 (472)
T KOG0303|consen 224 FLASGKIFTTGFSRMSERQIALWDPNNLEEPIALQELDT-SNGVLLPFYDPDTSIVYLCGKGDSSIRYFEITNEP 297 (472)
T ss_pred EeccCceeeeccccccccceeccCcccccCcceeEEecc-CCceEEeeecCCCCEEEEEecCCcceEEEEecCCC
Confidence 43333354443 3566778875432 22 233332 2345555678888876554 469999999987665
No 190
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.77 E-value=6.5e-16 Score=139.43 Aligned_cols=232 Identities=23% Similarity=0.361 Sum_probs=160.4
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCC--CEEEEEecCCCCEEEEecCC--CeEEEEeccCccee
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKG--PIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWK 289 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~--~V~~l~~~~~~~~l~sgs~D--~~v~iwd~~~~~~~ 289 (502)
..+..+.|+.+...|..|+.||. +++..+....+ +..-.. .|.-+-|+.. .++..+.+ +.+++.+.+.+..+
T Consensus 6 ~ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~~k~-~~~~~~~~~IvEmLFSSS--LvaiV~~~qpr~Lkv~~~Kk~~~I 81 (391)
T KOG2110|consen 6 PTINFIGFNQDSTLLSVGSKDGY-KIFSCSPFEKC-FSKDTEGVSIVEMLFSSS--LVAIVSIKQPRKLKVVHFKKKTTI 81 (391)
T ss_pred cceeeeeeccceeEEEccCCCce-eEEecCchHHh-hcccCCCeEEEEeecccc--eeEEEecCCCceEEEEEcccCceE
Confidence 45777789999999999998875 66765432221 111122 2333334432 33333333 33666665543322
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
..+. ...+|.+|.++. +.|+.+=.+ .|.|||++..
T Consensus 82 Ce~~------------------------------------------fpt~IL~VrmNr--~RLvV~Lee-~IyIydI~~M 116 (391)
T KOG2110|consen 82 CEIF------------------------------------------FPTSILAVRMNR--KRLVVCLEE-SIYIYDIKDM 116 (391)
T ss_pred EEEe------------------------------------------cCCceEEEEEcc--ceEEEEEcc-cEEEEecccc
Confidence 2111 123577777764 345555444 4999999999
Q ss_pred ceeeecccC-CCcEEEEEEccCCCCCCCCCCcEEEEE-Ee-CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEE
Q 010759 370 KYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILAS-AS-FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA 446 (502)
Q Consensus 370 ~~~~~~~~~-~~~i~~~~~sp~g~~~~~~~~~~~l~s-gs-~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la 446 (502)
++++++... ..+---++++|+... .+||. ++ ..|.|.|||+.+.+.+..+..|.+++-+|+|+|+|.+||
T Consensus 117 klLhTI~t~~~n~~gl~AlS~n~~n-------~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llA 189 (391)
T KOG2110|consen 117 KLLHTIETTPPNPKGLCALSPNNAN-------CYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLA 189 (391)
T ss_pred eeehhhhccCCCccceEeeccCCCC-------ceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEE
Confidence 999887654 222223455554321 14443 22 368999999999999999999999999999999999999
Q ss_pred EEeCCCc-EEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 447 SGSLDKS-MHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 447 sgs~Dg~-i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|||..|+ |+||.+.+|..+..|.-. ..|++++|+|++++|++.+..++|+||-+.
T Consensus 190 TASeKGTVIRVf~v~~G~kl~eFRRG~~~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~ 248 (391)
T KOG2110|consen 190 TASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIYSLSFSPDSQFLAASSNTETVHIFKLE 248 (391)
T ss_pred EeccCceEEEEEEcCCccEeeeeeCCceeeEEEEEEECCCCCeEEEecCCCeEEEEEec
Confidence 9999996 899999999999888532 358999999999999999999999999764
No 191
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.77 E-value=4.4e-18 Score=158.24 Aligned_cols=290 Identities=23% Similarity=0.349 Sum_probs=211.9
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~ 225 (502)
..|.+|.+.|+.+-|+..|..|+|||.|..|.+||+..+...... ..+|...|-...|-| +.
T Consensus 136 ~kL~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f----------------~SGH~~NvfQaKFiP~s~d 199 (559)
T KOG1334|consen 136 KKLNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSF----------------ESGHCNNVFQAKFIPFSGD 199 (559)
T ss_pred hcccCCCCccceeeecccCceeeccCccceEEeehhhccCccccc----------------ccccccchhhhhccCCCCC
Confidence 467899999999999999999999999999999999876432211 122334444445554 34
Q ss_pred CEEEEEECCCcEEEEECC--Cc--eeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeec--ccC
Q 010759 226 TLLATGSYDGQARIWSTN--GD--LKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFH--SGP 298 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~--~~--~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~--~~~ 298 (502)
+.+++.+.||.+++=.+. +. ....+..|.++|.-++.-|... -|++++.|+.+.-.|+++......+... ..+
T Consensus 200 ~ti~~~s~dgqvr~s~i~~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~ 279 (559)
T KOG1334|consen 200 RTIVTSSRDGQVRVSEILETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEK 279 (559)
T ss_pred cCceeccccCceeeeeeccccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCc
Confidence 678999999999987643 22 1345678999999999998774 5899999999999999876544333221 111
Q ss_pred ------eEEEecCCCceEEEEcCCCeEEEEEcCC------CcceeeecCCC------cceeEEEEcCCCCEEEEEeCCCc
Q 010759 299 ------TLDVDWRNNVSFATSSTDNMIYVCKIGE------NRPIKTFAGHQ------GEVNCVKWDPTGSLLASCSDDVT 360 (502)
Q Consensus 299 ------~~~~~~~~~~~~~~~~~d~~i~~~~~~~------~~~~~~~~~h~------~~v~~v~~~p~~~~l~sgs~dg~ 360 (502)
.++++..+...|++++.|..+++++.+. ..++..|..|. -.|+|++|+.++.-+.+...|-.
T Consensus 280 ~~v~L~~Ia~~P~nt~~faVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sElLaSYnDe~ 359 (559)
T KOG1334|consen 280 ERVGLYTIAVDPRNTNEFAVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSELLASYNDED 359 (559)
T ss_pred cceeeeeEecCCCCccccccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccceeeeecccc
Confidence 1234455667899999999999998753 22344444332 35899999988877777778888
Q ss_pred EEEEeCCC--C----------ceeee-cccCCC--cEEEEEEc-cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE
Q 010759 361 AKIWNMKQ--D----------KYVHD-LREHSK--EIYTIRWS-PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY 424 (502)
Q Consensus 361 i~iwd~~~--~----------~~~~~-~~~~~~--~i~~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~ 424 (502)
|.++.-.. + .++.. +++|.. .|..+-|- |.. .|+++||.-|.|.||+-.+++.+.
T Consensus 360 IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrs---------EyVvSGSDCGhIFiW~K~t~eii~ 430 (559)
T KOG1334|consen 360 IYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRS---------EYVVSGSDCGHIFIWDKKTGEIIR 430 (559)
T ss_pred eEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCcc---------ceEEecCccceEEEEecchhHHHH
Confidence 99984321 1 12222 455532 35555442 322 278999999999999999999988
Q ss_pred EeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 425 SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 425 ~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
-+.+....|+||-=+|--..||+.|-|..||||...+.
T Consensus 431 ~MegDr~VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~ 468 (559)
T KOG1334|consen 431 FMEGDRHVVNCLEPHPHLPVLASSGIDHDVKIWTPLTA 468 (559)
T ss_pred HhhcccceEeccCCCCCCchhhccCCccceeeecCCcc
Confidence 88887779999999999999999999999999987543
No 192
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.77 E-value=1.3e-16 Score=141.69 Aligned_cols=265 Identities=17% Similarity=0.273 Sum_probs=171.0
Q ss_pred cCCCCeEEEEECCCCCE-EEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc---Cc
Q 010759 211 EKSKDVTTLDWNGEGTL-LATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK---TE 286 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~-l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~---~~ 286 (502)
....++.++.|||||+. |.+...+-.|.+|.+.......+.-.+..+.+++|+|+|++.+.++.--..-..++. .-
T Consensus 89 eg~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W 168 (447)
T KOG4497|consen 89 EGQAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLLPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAW 168 (447)
T ss_pred cCCCcceeeeECCCcceEeeeecceeEEEEEEeccceeEEecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHH
Confidence 34567999999999965 556677889999999877665555555667899999999998877654221111111 11
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
.....+....-....+.|.++ ++.+.+|+.--.-.+..+ |. -.+..+.|+|.+++++.|+.|+.+||-+
T Consensus 169 ~ll~~f~~dT~DltgieWsPd--------g~~laVwd~~Leykv~aY--e~~lG~k~v~wsP~~qflavGsyD~~lrvln 238 (447)
T KOG4497|consen 169 ILLKEFKLDTIDLTGIEWSPD--------GNWLAVWDNVLEYKVYAY--ERGLGLKFVEWSPCNQFLAVGSYDQMLRVLN 238 (447)
T ss_pred HHHHhcCCCcccccCceECCC--------CcEEEEecchhhheeeee--eeccceeEEEeccccceEEeeccchhhhhhc
Confidence 122233333334445556443 344556664332222222 22 3578899999999999999999998854
Q ss_pred CCCCceeeec------------------------------------------------------------c------cCC
Q 010759 366 MKQDKYVHDL------------------------------------------------------------R------EHS 379 (502)
Q Consensus 366 ~~~~~~~~~~------------------------------------------------------------~------~~~ 379 (502)
--+.+...++ + ...
T Consensus 239 h~tWk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk 318 (447)
T KOG4497|consen 239 HFTWKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPK 318 (447)
T ss_pred eeeeeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCcc
Confidence 3222211110 0 000
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEe--CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASAS--FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
..+..++|+++. .+++|-. .-+.+-+||+++.+.-..+. ...+|....|+|....|+.+....++++|
T Consensus 319 ~g~g~lafs~Ds---------~y~aTrnd~~PnalW~Wdlq~l~l~avLi-Qk~piraf~WdP~~prL~vctg~srLY~W 388 (447)
T KOG4497|consen 319 CGAGKLAFSCDS---------TYAATRNDKYPNALWLWDLQNLKLHAVLI-QKHPIRAFEWDPGRPRLVVCTGKSRLYFW 388 (447)
T ss_pred cccceeeecCCc---------eEEeeecCCCCceEEEEechhhhhhhhhh-hccceeEEEeCCCCceEEEEcCCceEEEE
Confidence 112223444433 2566543 23568999998766544443 45689999999999999888888889999
Q ss_pred eCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010759 458 SLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 458 ~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
.......+..-...-.|..++|+-+|..++.++.|...
T Consensus 389 ~psg~~~V~vP~~GF~i~~l~W~~~g~~i~l~~kDafc 426 (447)
T KOG4497|consen 389 APSGPRVVGVPKKGFNIQKLQWLQPGEFIVLCGKDAFC 426 (447)
T ss_pred cCCCceEEecCCCCceeeeEEecCCCcEEEEEcCCceE
Confidence 98765555543323468899999999999999998743
No 193
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=9e-17 Score=160.50 Aligned_cols=213 Identities=17% Similarity=0.227 Sum_probs=143.8
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEec-CCCeEEEE--eccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVW--DVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iw--d~~~~ 286 (502)
...|.+.+|||||+.|+.++.+ ..|++|++.+.....+....+....++|+|+|++|+.++ .+|.+.|| |+.++
T Consensus 203 ~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~l~~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~ 282 (429)
T PRK01742 203 SQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKVVASFRGHNGAPAFSPDGSRLAFASSKDGVLNIYVMGANGG 282 (429)
T ss_pred CCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEEEecCCCccCceeECCCCCEEEEEEecCCcEEEEEEECCCC
Confidence 4568999999999999988754 369999987543323332233345689999999887764 57766555 43332
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEe
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWN 365 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd 365 (502)
. +..+..+...+..+.|+|||+.|+.++ .+|...||+
T Consensus 283 ~------------------------------------------~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~ 320 (429)
T PRK01742 283 T------------------------------------------PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYR 320 (429)
T ss_pred C------------------------------------------eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEE
Confidence 2 112233445567899999999776555 578888887
Q ss_pred CCCCc-eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCE
Q 010759 366 MKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEY 444 (502)
Q Consensus 366 ~~~~~-~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~ 444 (502)
+.... ....+ .+.. +...|+|+|. .|+..+.++ +.+||+.+++.......+ ...+++|+|+|++
T Consensus 321 ~~~~~~~~~~l-~~~~--~~~~~SpDG~---------~ia~~~~~~-i~~~Dl~~g~~~~lt~~~--~~~~~~~sPdG~~ 385 (429)
T PRK01742 321 MSASGGGASLV-GGRG--YSAQISADGK---------TLVMINGDN-VVKQDLTSGSTEVLSSTF--LDESPSISPNGIM 385 (429)
T ss_pred EECCCCCeEEe-cCCC--CCccCCCCCC---------EEEEEcCCC-EEEEECCCCCeEEecCCC--CCCCceECCCCCE
Confidence 64322 12222 2322 4567888886 455555554 566999888754322222 3456889999999
Q ss_pred EEEEeCCCcEEEEeC--CCCeeEEEEec-CCCEEEEEECCC
Q 010759 445 LASGSLDKSMHIWSL--KEGKIVKTYTG-NGGIFEVCWNKE 482 (502)
Q Consensus 445 lasgs~Dg~i~iw~~--~~~~~~~~~~~-~~~i~~~~ws~~ 482 (502)
|+.++.++.+.+|.+ .+|+.++.+.. .+.+..++|||-
T Consensus 386 i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 386 IIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred EEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 999999998888875 35777777765 455889999985
No 194
>PRK01742 tolB translocation protein TolB; Provisional
Probab=99.76 E-value=7.5e-17 Score=161.05 Aligned_cols=211 Identities=20% Similarity=0.230 Sum_probs=149.1
Q ss_pred CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceE
Q 010759 234 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF 310 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (502)
+..|++||..+.....+..|...+.+.+|+|+|++|+.++.+ ..|++||+.+++...
T Consensus 183 ~~~i~i~d~dg~~~~~lt~~~~~v~~p~wSPDG~~la~~s~~~~~~~i~i~dl~tg~~~~-------------------- 242 (429)
T PRK01742 183 PYEVRVADYDGFNQFIVNRSSQPLMSPAWSPDGSKLAYVSFENKKSQLVVHDLRSGARKV-------------------- 242 (429)
T ss_pred eEEEEEECCCCCCceEeccCCCccccceEcCCCCEEEEEEecCCCcEEEEEeCCCCceEE--------------------
Confidence 468999998877666777888899999999999999887654 368899887654211
Q ss_pred EEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEEE--eCCCCceeeecccCCCcEEEEEE
Q 010759 311 ATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIW--NMKQDKYVHDLREHSKEIYTIRW 387 (502)
Q Consensus 311 ~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iw--d~~~~~~~~~~~~~~~~i~~~~~ 387 (502)
+..+.+| ...++|+|||+.|+.++ .+|.+.|| |+.++.. ..+..+...+....|
T Consensus 243 -------------------l~~~~g~---~~~~~wSPDG~~La~~~~~~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~w 299 (429)
T PRK01742 243 -------------------VASFRGH---NGAPAFSPDGSRLAFASSKDGVLNIYVMGANGGTP-SQLTSGAGNNTEPSW 299 (429)
T ss_pred -------------------EecCCCc---cCceeECCCCCEEEEEEecCCcEEEEEEECCCCCe-EeeccCCCCcCCEEE
Confidence 1112233 23579999999887764 68876665 5555543 445556666788999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
+|+|. .+++++..+|..+||++... .....+ ++.. .+++|+|||++|+.++.++ +.+||+.+++...
T Consensus 300 SpDG~--------~i~f~s~~~g~~~I~~~~~~~~~~~~l-~~~~--~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~ 367 (429)
T PRK01742 300 SPDGQ--------SILFTSDRSGSPQVYRMSASGGGASLV-GGRG--YSAQISADGKTLVMINGDN-VVKQDLTSGSTEV 367 (429)
T ss_pred CCCCC--------EEEEEECCCCCceEEEEECCCCCeEEe-cCCC--CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEE
Confidence 99986 24455556788888876532 222223 3433 4678999999999888765 5669998887543
Q ss_pred EEecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 467 TYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 467 ~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.... .....++|+|+|++|++++.++.+.+|.+
T Consensus 368 lt~~-~~~~~~~~sPdG~~i~~~s~~g~~~~l~~ 400 (429)
T PRK01742 368 LSST-FLDESPSISPNGIMIIYSSTQGLGKVLQL 400 (429)
T ss_pred ecCC-CCCCCceECCCCCEEEEEEcCCCceEEEE
Confidence 3222 23457889999999999999998887764
No 195
>KOG0649 consensus WD40 repeat protein [General function prediction only]
Probab=99.76 E-value=1.8e-15 Score=129.09 Aligned_cols=277 Identities=14% Similarity=0.215 Sum_probs=194.4
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
.|++-+|+|.+++|+.|+.+|.|.+..+..-........+...+. ....|..+|+.++|+ ..+|++|+ ||
T Consensus 12 tvf~qa~sp~~~~l~agn~~G~iav~sl~sl~s~sa~~~gk~~iv-------~eqahdgpiy~~~f~--d~~Lls~g-dG 81 (325)
T KOG0649|consen 12 TVFAQAISPSKQYLFAGNLFGDIAVLSLKSLDSGSAEPPGKLKIV-------PEQAHDGPIYYLAFH--DDFLLSGG-DG 81 (325)
T ss_pred HHHHHhhCCcceEEEEecCCCeEEEEEehhhhccccCCCCCccee-------eccccCCCeeeeeee--hhheeecc-Cc
Confidence 477889999999999999999999999865322211111211111 114568899999999 34677766 49
Q ss_pred cEEEEECCCce-----e----EeecCCC-----CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 236 QARIWSTNGDL-----K----CTLSKHK-----GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 236 ~i~iw~~~~~~-----~----~~~~~h~-----~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
.|+=|...... + ....-|. -.|.++-..|..+-++.++.|+.+..||+++++....|.+|..-+.+
T Consensus 82 ~V~gw~W~E~~es~~~K~lwe~~~P~~~~~~evPeINam~ldP~enSi~~AgGD~~~y~~dlE~G~i~r~~rGHtDYvH~ 161 (325)
T KOG0649|consen 82 LVYGWEWNEEEESLATKRLWEVKIPMQVDAVEVPEINAMWLDPSENSILFAGGDGVIYQVDLEDGRIQREYRGHTDYVHS 161 (325)
T ss_pred eEEEeeehhhhhhccchhhhhhcCccccCcccCCccceeEeccCCCcEEEecCCeEEEEEEecCCEEEEEEcCCcceeee
Confidence 99988643210 0 1112233 25788888999988888889999999999999999999999999998
Q ss_pred EecC-CCceEEEEcCCCeEEEEEcCCCcceeeecC---------CCc-ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 010759 302 VDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAG---------HQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 302 ~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---------h~~-~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~ 370 (502)
+.-+ .+..+.+++.||++++|+.++.+.++.+.. |-+ .|-+++- +..++++|+ ...+.+|.++...
T Consensus 162 vv~R~~~~qilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~~g~wigala~--~edWlvCGg-Gp~lslwhLrsse 238 (325)
T KOG0649|consen 162 VVGRNANGQILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPDWGKWIGALAV--NEDWLVCGG-GPKLSLWHLRSSE 238 (325)
T ss_pred eeecccCcceeecCCCccEEEEeccccceeEEeccccChhhcCcccCceeEEEec--cCceEEecC-CCceeEEeccCCC
Confidence 8874 567889999999999999999988776542 222 3556665 455776664 4579999999887
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC-CCEEEEEe
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT-GEYLASGS 449 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-g~~lasgs 449 (502)
+...|. ...++..+.|..+ .+++++..+.|.-|.+. |.+-..+.......++.+|+-. -++|-.++
T Consensus 239 ~t~vfp-ipa~v~~v~F~~d-----------~vl~~G~g~~v~~~~l~-Gvl~a~ip~~s~~c~s~s~~~~p~k~~s~ag 305 (325)
T KOG0649|consen 239 STCVFP-IPARVHLVDFVDD-----------CVLIGGEGNHVQSYTLN-GVLQANIPVESTACYSASWQTSPIKFISIAG 305 (325)
T ss_pred ceEEEe-cccceeEeeeecc-----------eEEEeccccceeeeeec-cEEEEeccCCccceeeecccCCceEEEEecc
Confidence 766553 3345666666544 45667777788888764 4444444433445666666543 35666777
Q ss_pred CCCcEEEEe
Q 010759 450 LDKSMHIWS 458 (502)
Q Consensus 450 ~Dg~i~iw~ 458 (502)
..+.+.|+.
T Consensus 306 ~s~~~~i~~ 314 (325)
T KOG0649|consen 306 FSNKLHILK 314 (325)
T ss_pred cceeeeeee
Confidence 777777764
No 196
>KOG2110 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.76 E-value=2.4e-15 Score=135.82 Aligned_cols=312 Identities=15% Similarity=0.227 Sum_probs=196.8
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
...++.+.|+.+...|..|+.||. ++|........ .+.......|.-+-||..---+++...
T Consensus 5 ~~ti~~~~~Nqd~~~lsvGs~~Gy-k~~~~~~~~k~-----------------~~~~~~~~~IvEmLFSSSLvaiV~~~q 66 (391)
T KOG2110|consen 5 KPTINFIGFNQDSTLLSVGSKDGY-KIFSCSPFEKC-----------------FSKDTEGVSIVEMLFSSSLVAIVSIKQ 66 (391)
T ss_pred CcceeeeeeccceeEEEccCCCce-eEEecCchHHh-----------------hcccCCCeEEEEeecccceeEEEecCC
Confidence 345777789999999999999984 56765432110 001111223445556654333333333
Q ss_pred CCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec---ccCeEEEecCCCc-
Q 010759 234 DGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH---SGPTLDVDWRNNV- 308 (502)
Q Consensus 234 dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~~~~~~- 308 (502)
-+.+++.+.... ..|.+ ....+|.+|+++.+ +|+++=.+ .|.|||+++++.+.++... ...+.++.+....
T Consensus 67 pr~Lkv~~~Kk~~~ICe~-~fpt~IL~VrmNr~--RLvV~Lee-~IyIydI~~MklLhTI~t~~~n~~gl~AlS~n~~n~ 142 (391)
T KOG2110|consen 67 PRKLKVVHFKKKTTICEI-FFPTSILAVRMNRK--RLVVCLEE-SIYIYDIKDMKLLHTIETTPPNPKGLCALSPNNANC 142 (391)
T ss_pred CceEEEEEcccCceEEEE-ecCCceEEEEEccc--eEEEEEcc-cEEEEecccceeehhhhccCCCccceEeeccCCCCc
Confidence 345788876543 23332 24568899999864 56666554 4999999999998877654 2234555555433
Q ss_pred eEE--EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc-EEEEeCCCCceeeecccC--CCcEE
Q 010759 309 SFA--TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIWNMKQDKYVHDLREH--SKEIY 383 (502)
Q Consensus 309 ~~~--~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~~~--~~~i~ 383 (502)
.++ .+.+.|.|++|+..+-+++..+..|.+.+.|++|+++|.+|||+|+.|+ |||+.+.++..+.+|+.. ...|+
T Consensus 143 ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKGTVIRVf~v~~G~kl~eFRRG~~~~~Iy 222 (391)
T KOG2110|consen 143 YLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKGTVIRVFSVPEGQKLYEFRRGTYPVSIY 222 (391)
T ss_pred eEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCceEEEEEEcCCccEeeeeeCCceeeEEE
Confidence 333 2345788999999999999999999999999999999999999999997 699999999999988753 34689
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEE-ECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA-FSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~-~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
+++|+|++. +|++.|..++|++|.+..-. ......+-.... +.+-.+.+.+---.+.-.+|+....
T Consensus 223 SL~Fs~ds~---------~L~~sS~TeTVHiFKL~~~~----~~~~~~p~~~~~~~~~~sk~~~sylps~V~~~~~~~R~ 289 (391)
T KOG2110|consen 223 SLSFSPDSQ---------FLAASSNTETVHIFKLEKVS----NNPPESPTAGTSWFGKVSKAATSYLPSQVSSVLDQSRK 289 (391)
T ss_pred EEEECCCCC---------eEEEecCCCeEEEEEecccc----cCCCCCCCCCCcccchhhhhhhhhcchhhhhhhhhccc
Confidence 999999986 78888889999999886433 111110000000 0000000000000111223554432
Q ss_pred eeEEEEecCC--CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 463 KIVKTYTGNG--GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 463 ~~~~~~~~~~--~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
-....++..+ .+..+.=.+...++..++.||.++.|.+
T Consensus 290 FAt~~l~~s~~~~~~~l~~~~~~~~v~vas~dG~~y~y~l 329 (391)
T KOG2110|consen 290 FATAKLPESGRKNICSLSSIQKIPRVLVASYDGHLYSYRL 329 (391)
T ss_pred eeEEEccCCCccceEEeeccCCCCEEEEEEcCCeEEEEEc
Confidence 2222222222 2333333357788889999999888865
No 197
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.75 E-value=4.1e-18 Score=157.52 Aligned_cols=227 Identities=21% Similarity=0.341 Sum_probs=188.7
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC
Q 010759 258 FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ 337 (502)
Q Consensus 258 ~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~ 337 (502)
+.+.|+.+|.+|+.|+.-|.|-.+|..++.+...+.. ...+.++.|..+..|++....+.+++||-.... +..+.. .
T Consensus 133 Y~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~Ei~v-~Etv~Dv~~LHneq~~AVAQK~y~yvYD~~GtE-lHClk~-~ 209 (545)
T KOG1272|consen 133 YHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHFEINV-METVRDVTFLHNEQFFAVAQKKYVYVYDNNGTE-LHCLKR-H 209 (545)
T ss_pred eeeeecCCccEEEecCCccceeeeecccceeeeeeeh-hhhhhhhhhhcchHHHHhhhhceEEEecCCCcE-Eeehhh-c
Confidence 7889999999999999999999999999987766543 234667778766677777778889999865432 222222 2
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC
Q 010759 338 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 417 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~ 417 (502)
..|..+.|-|..-+|++++..|.++.-|+.+|+++..++...+.+..++-.|-.. ++-+|...|+|.+|..
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~Na---------Vih~GhsnGtVSlWSP 280 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNA---------VIHLGHSNGTVSLWSP 280 (545)
T ss_pred CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccc---------eEEEcCCCceEEecCC
Confidence 4688899999999999999999999999999999999988888888888777765 7889999999999999
Q ss_pred CCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 418 ELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 418 ~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
....++..+-.|.++|.+|++.++|+|+||+|.|..|+|||++....+.++........+++|-.| .||++.. ..|.|
T Consensus 281 ~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~Sqkg-lLA~~~G-~~v~i 358 (545)
T KOG1272|consen 281 NSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKG-LLALSYG-DHVQI 358 (545)
T ss_pred CCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeecCCCcccccccccc-ceeeecC-Ceeee
Confidence 999999899999999999999999999999999999999999998877777666667888898888 4444443 35777
Q ss_pred E
Q 010759 498 L 498 (502)
Q Consensus 498 ~ 498 (502)
|
T Consensus 359 w 359 (545)
T KOG1272|consen 359 W 359 (545)
T ss_pred e
Confidence 7
No 198
>KOG0290 consensus Conserved WD40 repeat-containing protein AN11 [Function unknown]
Probab=99.75 E-value=2.2e-16 Score=137.96 Aligned_cols=229 Identities=27% Similarity=0.491 Sum_probs=163.6
Q ss_pred ccccceeEEEECCCCC-----EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CC
Q 010759 152 GHTSEVCACAWSPAGS-----LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EG 225 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~-----~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~ 225 (502)
.|..+++.+-|.|+.. +|||.| ..+|+|.+.........+ ..+.. .....+..++++.+|+. +-
T Consensus 94 d~~YP~tK~~wiPd~~g~~pdlLATs~--D~LRlWri~~ee~~~~~~------~~L~~--~kns~~~aPlTSFDWne~dp 163 (364)
T KOG0290|consen 94 DHPYPVTKLMWIPDSKGVYPDLLATSS--DFLRLWRIGDEESRVELQ------SVLNN--NKNSEFCAPLTSFDWNEVDP 163 (364)
T ss_pred CCCCCccceEecCCccccCcchhhccc--CeEEEEeccCcCCceehh------hhhcc--CcccccCCcccccccccCCc
Confidence 4888999999999863 566654 579999986421110000 00111 11223457899999987 77
Q ss_pred CEEEEEECCCcEEEEECCCc----eeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEe-eec--cc
Q 010759 226 TLLATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF-EFH--SG 297 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~--~~ 297 (502)
+++.+.+-|-++.|||++.. .+..+..|..+|+.++|...+ +.|++.+.||+||++|++..+-...+ +.. ..
T Consensus 164 ~~igtSSiDTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~leHSTIIYE~p~~~~ 243 (364)
T KOG0290|consen 164 NLIGTSSIDTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSLEHSTIIYEDPSPST 243 (364)
T ss_pred ceeEeecccCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEecccccceEEecCCCCCC
Confidence 89999999999999998753 466788999999999999866 57899999999999999987643322 221 23
Q ss_pred CeEEEecCCC--ceEEEE-cCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCce-
Q 010759 298 PTLDVDWRNN--VSFATS-STDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKY- 371 (502)
Q Consensus 298 ~~~~~~~~~~--~~~~~~-~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~~~- 371 (502)
+..-+.|... ..+++- .+...|.+.|++.. .|+..+.+|.+.|++++|.|. ...|+||++|..+.|||+.+.-.
T Consensus 244 pLlRLswnkqDpnymATf~~dS~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~ 323 (364)
T KOG0290|consen 244 PLLRLSWNKQDPNYMATFAMDSNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRE 323 (364)
T ss_pred cceeeccCcCCchHHhhhhcCCceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCCcceEEEEeccccccc
Confidence 4555666432 233333 44567888888754 578889999999999999996 46799999999999999875322
Q ss_pred -----eeecccCCCcEEEEEEccCC
Q 010759 372 -----VHDLREHSKEIYTIRWSPTG 391 (502)
Q Consensus 372 -----~~~~~~~~~~i~~~~~sp~g 391 (502)
+..+. ..+.|..+.|+|.-
T Consensus 324 ~~~dPilay~-a~~EVNqi~Ws~~~ 347 (364)
T KOG0290|consen 324 NGEDPILAYT-AGGEVNQIQWSSSQ 347 (364)
T ss_pred CCCCchhhhh-ccceeeeeeecccC
Confidence 11122 45789999998754
No 199
>PRK11028 6-phosphogluconolactonase; Provisional
Probab=99.74 E-value=4.4e-15 Score=143.78 Aligned_cols=266 Identities=14% Similarity=0.201 Sum_probs=163.7
Q ss_pred ccceeEEEECCCCCEEEEEe-CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGS-GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs-~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
.+....++++|++++|+.++ .++.|.+|++..... +. ...... .......++|+|++++|++++
T Consensus 34 ~~~~~~l~~spd~~~lyv~~~~~~~i~~~~~~~~g~--------l~--~~~~~~-----~~~~p~~i~~~~~g~~l~v~~ 98 (330)
T PRK11028 34 PGQVQPMVISPDKRHLYVGVRPEFRVLSYRIADDGA--------LT--FAAESP-----LPGSPTHISTDHQGRFLFSAS 98 (330)
T ss_pred CCCCccEEECCCCCEEEEEECCCCcEEEEEECCCCc--------eE--Eeeeec-----CCCCceEEEECCCCCEEEEEE
Confidence 35577899999999887765 578899999862110 10 111110 122457899999999988876
Q ss_pred C-CCcEEEEECCC--c---eeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 233 Y-DGQARIWSTNG--D---LKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 233 ~-dg~i~iw~~~~--~---~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
. ++.|.+|+++. . ....+. +.....+++++|++++++ +...++.|.+||+.+........
T Consensus 99 ~~~~~v~v~~~~~~g~~~~~~~~~~-~~~~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~------------ 165 (330)
T PRK11028 99 YNANCVSVSPLDKDGIPVAPIQIIE-GLEGCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQE------------ 165 (330)
T ss_pred cCCCeEEEEEECCCCCCCCceeecc-CCCcccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccC------------
Confidence 5 78999998752 1 112222 223457789999999885 45567999999987532110000
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEeCCC--Cc--eeeecccCC-
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQ--DK--YVHDLREHS- 379 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~~--~~--~~~~~~~~~- 379 (502)
...+. ... ......+.|+|+|++++++.. +++|.+|++.. +. .+..+....
T Consensus 166 ---------------------~~~~~-~~~-g~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~ 222 (330)
T PRK11028 166 ---------------------PAEVT-TVE-GAGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPA 222 (330)
T ss_pred ---------------------CCcee-cCC-CCCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCC
Confidence 00000 000 122456899999999877766 89999999873 22 233332111
Q ss_pred -----CcEEEEEEccCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCCCeEEEEeeCC---CCCEEEEEECCCCCEEEEEeC
Q 010759 380 -----KEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVELGKLLYSLNGH---REPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 380 -----~~i~~~~~sp~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~~~~~~~~~~h---~~~v~~l~~spdg~~lasgs~ 450 (502)
.....+.++|++. +|+++ ..++.|.+|++.......++.++ ......++|+|+|++|++++.
T Consensus 223 ~~~~~~~~~~i~~~pdg~---------~lyv~~~~~~~I~v~~i~~~~~~~~~~~~~~~~~~p~~~~~~~dg~~l~va~~ 293 (330)
T PRK11028 223 DFSDTRWAADIHITPDGR---------HLYACDRTASLISVFSVSEDGSVLSFEGHQPTETQPRGFNIDHSGKYLIAAGQ 293 (330)
T ss_pred cCCCCccceeEEECCCCC---------EEEEecCCCCeEEEEEEeCCCCeEEEeEEEeccccCCceEECCCCCEEEEEEc
Confidence 1223577888875 44444 45789999998643321222222 123457899999999988775
Q ss_pred -CCcEEEEeCC--CCee--EEEEecCCCEEEEEE
Q 010759 451 -DKSMHIWSLK--EGKI--VKTYTGNGGIFEVCW 479 (502)
Q Consensus 451 -Dg~i~iw~~~--~~~~--~~~~~~~~~i~~~~w 479 (502)
+++|.+|++. ++.+ +..+.......++++
T Consensus 294 ~~~~v~v~~~~~~~g~l~~~~~~~~g~~P~~~~~ 327 (330)
T PRK11028 294 KSHHISVYEIDGETGLLTELGRYAVGQGPMWVSV 327 (330)
T ss_pred cCCcEEEEEEcCCCCcEEEccccccCCCceEEEE
Confidence 8999999874 4443 333433333444444
No 200
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.74 E-value=4.1e-16 Score=147.13 Aligned_cols=205 Identities=17% Similarity=0.265 Sum_probs=146.2
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~ 225 (502)
..|.||++.|+|+.|+.+|.+|+|||.|-.+.|||...-+ .+.....+|...|.++.|-| +.
T Consensus 44 ~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~K----------------llhsI~TgHtaNIFsvKFvP~tnn 107 (758)
T KOG1310|consen 44 AELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYK----------------LLHSISTGHTANIFSVKFVPYTNN 107 (758)
T ss_pred hhhccccceecceeecCCCCEEeecCCcceEEeecchhcc----------------eeeeeecccccceeEEeeeccCCC
Confidence 4588999999999999999999999999999999975322 11112235678899999988 56
Q ss_pred CEEEEEECCCcEEEEECCC-----------ceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeE-Ee
Q 010759 226 TLLATGSYDGQARIWSTNG-----------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQ-QF 292 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-----------~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~-~~ 292 (502)
+.++||..|..|+++|+.. .....+..|...|.-|+-.|.+ +.|.+++.||+|+.+|++...... ..
T Consensus 108 riv~sgAgDk~i~lfdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~ 187 (758)
T KOG1310|consen 108 RIVLSGAGDKLIKLFDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDE 187 (758)
T ss_pred eEEEeccCcceEEEEecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccc
Confidence 7899999999999999863 1223456799999999999998 789999999999999998632111 00
Q ss_pred ee-----------cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCc------------------ceeeec-CCC-----
Q 010759 293 EF-----------HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR------------------PIKTFA-GHQ----- 337 (502)
Q Consensus 293 ~~-----------~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~------------------~~~~~~-~h~----- 337 (502)
.. .....+++.......|+.++.|-..+++|.+... ++..|. +|.
T Consensus 188 ~~~~~l~ny~~~lielk~ltisp~rp~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~g 267 (758)
T KOG1310|consen 188 DCPSILVNYNPQLIELKCLTISPSRPYYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQG 267 (758)
T ss_pred cccHHHHHhchhhheeeeeeecCCCCceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCccc
Confidence 00 0112345556677889999999999999842110 122222 332
Q ss_pred ---cc---eeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 338 ---GE---VNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 338 ---~~---v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
.. ++-+.|+|+|.-|+..-..-.|.++|+..
T Consensus 268 n~~~~~~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~ 304 (758)
T KOG1310|consen 268 NLDRYITCCTYVTFNPNGTELLVSWGGEHVYLFDVNE 304 (758)
T ss_pred ccccceeeeEEEEECCCCcEEEEeeCCeEEEEEeecC
Confidence 12 34578899997665554445788888653
No 201
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.73 E-value=2.8e-15 Score=132.90 Aligned_cols=235 Identities=14% Similarity=0.227 Sum_probs=164.0
Q ss_pred CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc--CeEEEecCCCceEEEEcCC------CeEEEEEcCCC
Q 010759 256 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG--PTLDVDWRNNVSFATSSTD------NMIYVCKIGEN 327 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~ 327 (502)
...+++|+.+...|+.|..+ -.+||+.+.-+....-..+.+ .+..+-|+.+...+.++.+ +.+.+||--..
T Consensus 7 ~~lsvs~NQD~ScFava~~~-Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDT-GFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred ceeEEEEccCCceEEEEecC-ceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 34569999998877777655 479998765322111111111 2223345555555555443 57999997777
Q ss_pred cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE
Q 010759 328 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA 406 (502)
Q Consensus 328 ~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg 406 (502)
+++.++. -..+|.+|.++++ .|+.. ..+.|.||... .-+.++.+.....+---++..|... ...+..-|
T Consensus 86 ~~i~el~-f~~~I~~V~l~r~--riVvv-l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~------k~~LafPg 155 (346)
T KOG2111|consen 86 RCIIELS-FNSEIKAVKLRRD--RIVVV-LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSN------KSLLAFPG 155 (346)
T ss_pred cEEEEEE-eccceeeEEEcCC--eEEEE-ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCC------ceEEEcCC
Confidence 7777664 4678999999876 34433 46789999876 3344444332221111222233321 12333446
Q ss_pred eCCCeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeCCCc-EEEEeCCCCeeEEEEec---CCCEEEEEEC
Q 010759 407 SFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSLDKS-MHIWSLKEGKIVKTYTG---NGGIFEVCWN 480 (502)
Q Consensus 407 s~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~-i~iw~~~~~~~~~~~~~---~~~i~~~~ws 480 (502)
-.-|.|+|-|+...+. ...+.+|...|.|++.+-+|.+|||+|..|+ |+|||..+|++++.+.- ...|++++||
T Consensus 156 ~k~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~iaFS 235 (346)
T KOG2111|consen 156 FKTGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIAFS 235 (346)
T ss_pred CccceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEEeC
Confidence 6789999999986555 4778999999999999999999999999986 89999999999988853 4569999999
Q ss_pred CCCCEEEEEECCCeEEEEEee
Q 010759 481 KEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 481 ~~g~~la~~~~~~~v~v~~~~ 501 (502)
|++.+||+++..|+|+||.++
T Consensus 236 p~~s~LavsSdKgTlHiF~l~ 256 (346)
T KOG2111|consen 236 PNSSWLAVSSDKGTLHIFSLR 256 (346)
T ss_pred CCccEEEEEcCCCeEEEEEee
Confidence 999999999999999999886
No 202
>KOG1517 consensus Guanine nucleotide binding protein MIP1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.73 E-value=4.3e-16 Score=157.25 Aligned_cols=256 Identities=19% Similarity=0.265 Sum_probs=171.8
Q ss_pred ccceeEEEECC--CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 154 TSEVCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 154 ~~~V~~~~~sp--d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
...|+.+.+-. |..+|++|+.||.||||+-..... ..+.-+.....+.+......+.=.-++|.....+|+++
T Consensus 1109 ~t~Vs~l~liNe~D~aLlLtas~dGvIRIwk~y~~~~-----~~~eLVTaw~~Ls~~~~~~r~~~~v~dWqQ~~G~Ll~t 1183 (1387)
T KOG1517|consen 1109 DTRVSDLELINEQDDALLLTASSDGVIRIWKDYADKW-----KKPELVTAWSSLSDQLPGARGTGLVVDWQQQSGHLLVT 1183 (1387)
T ss_pred CCccceeeeecccchhheeeeccCceEEEeccccccc-----CCceeEEeeccccccCccCCCCCeeeehhhhCCeEEec
Confidence 35688888754 457999999999999997543221 00111111111222211112222556888877777777
Q ss_pred ECCCcEEEEECCCceeEe--ecCCCCCEEEEEec-CCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 232 SYDGQARIWSTNGDLKCT--LSKHKGPIFSLKWN-KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~~~--~~~h~~~V~~l~~~-~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
|.-..|+|||...+.+.. ..+....|+++.-+ +.|+.+++|..||.|++||.+....
T Consensus 1184 Gd~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~-------------------- 1243 (1387)
T KOG1517|consen 1184 GDVRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPP-------------------- 1243 (1387)
T ss_pred CCeeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCc--------------------
Confidence 778999999998765442 23444567776543 3468999999999999999875321
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcc--eeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCcee--eecccC---CC
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGE--VNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYV--HDLREH---SK 380 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~--v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~--~~~~~~---~~ 380 (502)
..++..++.|+.. |..+.+.+.|- .|++|+.||.|++||++..... .++..| .+
T Consensus 1244 ------------------ds~v~~~R~h~~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs 1305 (1387)
T KOG1517|consen 1244 ------------------DSLVCVYREHNDVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGS 1305 (1387)
T ss_pred ------------------cccceeecccCCcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCc
Confidence 0123345567665 88888887664 4999999999999999874211 112222 23
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-------CCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-------HREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-------h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
..+++..+++.. ++|+|+. +.|+||++. |+.+..++. ..+.+.|++|+|..-+||+|+.|.+
T Consensus 1306 ~lTal~VH~hap---------iiAsGs~-q~ikIy~~~-G~~l~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~ 1374 (1387)
T KOG1517|consen 1306 ALTALTVHEHAP---------IIASGSA-QLIKIYSLS-GEQLNIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADST 1374 (1387)
T ss_pred cceeeeeccCCC---------eeeecCc-ceEEEEecC-hhhhcccccCcccccCcCCCcceeeecchhHhhhhccCCce
Confidence 477777777654 7899988 999999986 443333322 2356899999999999999999999
Q ss_pred EEEEeCCCCe
Q 010759 454 MHIWSLKEGK 463 (502)
Q Consensus 454 i~iw~~~~~~ 463 (502)
|.||...++.
T Consensus 1375 V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1375 VSIYSCEKPR 1384 (1387)
T ss_pred EEEeecCCcC
Confidence 9999876543
No 203
>KOG1523 consensus Actin-related protein Arp2/3 complex, subunit ARPC1/p41-ARC [Cytoskeleton]
Probab=99.72 E-value=2.2e-15 Score=133.54 Aligned_cols=237 Identities=20% Similarity=0.309 Sum_probs=173.6
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..+|+|.||++|++.+|.+-....|.||.......- ........|...|++++|+|..+.|++++.
T Consensus 10 ~~pitchAwn~drt~iAv~~~~~evhiy~~~~~~~w--------------~~~htls~Hd~~vtgvdWap~snrIvtcs~ 75 (361)
T KOG1523|consen 10 LEPITCHAWNSDRTQIAVSPNNHEVHIYSMLGADLW--------------EPAHTLSEHDKIVTGVDWAPKSNRIVTCSH 75 (361)
T ss_pred cCceeeeeecCCCceEEeccCCceEEEEEecCCCCc--------------eeceehhhhCcceeEEeecCCCCceeEccC
Confidence 467999999999999999999999999986544311 011123456788999999999999999999
Q ss_pred CCcEEEEEC-CC---ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 234 DGQARIWST-NG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 234 dg~i~iw~~-~~---~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
|.+.++|.. .+ .....+..|+.+++++.|+|.++.|++||.-+.|.||-.+...
T Consensus 76 drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSgar~isVcy~E~EN---------------------- 133 (361)
T KOG1523|consen 76 DRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSGARLISVCYYEQEN---------------------- 133 (361)
T ss_pred CCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccCccEEEEEEEeccc----------------------
Confidence 999999987 33 2334567889999999999999999999999999998654321
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC------------------Cce
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ------------------DKY 371 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~------------------~~~ 371 (502)
-|-+. +.+ -..+.+.|++++|+|++-+++.|+.|+..|||...- +.+
T Consensus 134 -----------dWWVs--Khi--kkPirStv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~l 198 (361)
T KOG1523|consen 134 -----------DWWVS--KHI--KKPIRSTVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQL 198 (361)
T ss_pred -----------ceehh--hhh--CCccccceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHH
Confidence 01110 011 123467899999999999999999999999996421 222
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
+.++....+.+..+.|+|.|. .|+-.++|+++.+-|..... .+..+..-.-|..++.|-.+ ..++.++.
T Consensus 199 m~E~~~~ggwvh~v~fs~sG~---------~lawv~Hds~v~~~da~~p~~~v~~~~~~~lP~ls~~~ise-~~vv~ag~ 268 (361)
T KOG1523|consen 199 MSEASSSGGWVHGVLFSPSGN---------RLAWVGHDSTVSFVDAAGPSERVQSVATAQLPLLSVSWISE-NSVVAAGY 268 (361)
T ss_pred HHhhccCCCceeeeEeCCCCC---------EeeEecCCCceEEeecCCCchhccchhhccCCceeeEeecC-CceeecCC
Confidence 334444567899999999996 68889999999999987654 33333323366777777543 23334444
Q ss_pred C
Q 010759 451 D 451 (502)
Q Consensus 451 D 451 (502)
|
T Consensus 269 ~ 269 (361)
T KOG1523|consen 269 D 269 (361)
T ss_pred C
Confidence 4
No 204
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.72 E-value=1.9e-15 Score=138.86 Aligned_cols=195 Identities=22% Similarity=0.293 Sum_probs=146.1
Q ss_pred EEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc-
Q 010759 300 LDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE- 377 (502)
Q Consensus 300 ~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~- 377 (502)
..+.+.. +..+++++.||++++|+.....++.....|.++|.+++|+|||++|++-+.| ..+||+..++..+.....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~~ 226 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTPF 226 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCCc
Confidence 3455543 4778899999999999998888888888999999999999999999999999 999999999866655432
Q ss_pred -CCCcEEEEEEccCCCCCCCCCCcEEEEE-EeCCCeEEEEeCCCCeE-----EEEeeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 378 -HSKEIYTIRWSPTGSGTNNPNQQLILAS-ASFDSTVKLWDVELGKL-----LYSLNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 378 -~~~~i~~~~~sp~g~~~~~~~~~~~l~s-gs~dg~i~iwd~~~~~~-----~~~~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
.......++|+.++.. ..+++++ ...-+.|+.|++...+. ..+...-...|++++.|++|+++|.|+.
T Consensus 227 ~k~~~~~~cRF~~d~~~-----~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~ 301 (398)
T KOG0771|consen 227 SKDEMFSSCRFSVDNAQ-----ETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTM 301 (398)
T ss_pred ccchhhhhceecccCCC-----ceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEecc
Confidence 2334556677766532 1123333 33445566666542211 1111122347999999999999999999
Q ss_pred CCcEEEEeCCCCeeEEEEec--CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 451 DKSMHIWSLKEGKIVKTYTG--NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 451 Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
||.|-|+++.+-+.++..+. .+-|+++.|+||.++++.-+.+.+..|.-+
T Consensus 302 dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~~~svSs~~~~~v~~l 353 (398)
T KOG0771|consen 302 DGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRYLASVSSDNEAAVTKL 353 (398)
T ss_pred CCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCcccccccCCceeEEEE
Confidence 99999999998777776643 345899999999999999888888877755
No 205
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.70 E-value=1.5e-14 Score=139.92 Aligned_cols=304 Identities=15% Similarity=0.169 Sum_probs=188.2
Q ss_pred EEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCe-EEEEECCCCCEEEEEECCCcEEEEECCCc-ee
Q 010759 170 ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV-TTLDWNGEGTLLATGSYDGQARIWSTNGD-LK 247 (502)
Q Consensus 170 ~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~ 247 (502)
++-..++.|.+.|..+.+. +..+.. ...+ ..+.|+|||+++++++.||.|.++|+... ..
T Consensus 10 V~~~~~~~v~viD~~t~~~-------------~~~i~~-----~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v 71 (369)
T PF02239_consen 10 VVERGSGSVAVIDGATNKV-------------VARIPT-----GGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVV 71 (369)
T ss_dssp EEEGGGTEEEEEETTT-SE-------------EEEEE------STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEE
T ss_pred EEecCCCEEEEEECCCCeE-------------EEEEcC-----CCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEE
Confidence 4556789999999776432 122221 1223 34679999999999999999999998654 44
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEe-cCCCeEEEEeccCcceeEEeeeccc-------CeEEEe-cCCCceEEEEcC-CC
Q 010759 248 CTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSG-------PTLDVD-WRNNVSFATSST-DN 317 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~~~~l~sg-s~D~~v~iwd~~~~~~~~~~~~~~~-------~~~~~~-~~~~~~~~~~~~-d~ 317 (502)
.++..- ....+++++++|++++++ ...+.+.++|.++.+.++.+..... .+..+- ......|+.+-. .+
T Consensus 72 ~~i~~G-~~~~~i~~s~DG~~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~ 150 (369)
T PF02239_consen 72 ATIKVG-GNPRGIAVSPDGKYVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTG 150 (369)
T ss_dssp EEEE-S-SEEEEEEE--TTTEEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTT
T ss_pred EEEecC-CCcceEEEcCCCCEEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCC
Confidence 455443 345889999999998866 4689999999999998887754321 233342 334444665544 47
Q ss_pred eEEEEEcCCCcceee-ecCCCcceeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCceeeecc----cCCCcEEEE------
Q 010759 318 MIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDKYVHDLR----EHSKEIYTI------ 385 (502)
Q Consensus 318 ~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~sg-s~dg~i~iwd~~~~~~~~~~~----~~~~~i~~~------ 385 (502)
.|.+.+....+++.. ............|+|++++++.+ ..+..|-++|..+++.+..+. .|..+...+
T Consensus 151 ~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dpdgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~php~~g 230 (369)
T PF02239_consen 151 EIWVVDYSDPKNLKVTTIKVGRFPHDGGFDPDGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANFPHPGFG 230 (369)
T ss_dssp EEEEEETTTSSCEEEEEEE--TTEEEEEE-TTSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEEEETTTE
T ss_pred eEEEEEeccccccceeeecccccccccccCcccceeeecccccceeEEEeeccceEEEEeeccccccccccccccCCCcc
Confidence 888888776554432 22223345678999999987654 456789999999888765442 233333322
Q ss_pred -EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE----eCCCcEEEEeCC
Q 010759 386 -RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG----SLDKSMHIWSLK 460 (502)
Q Consensus 386 -~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg----s~Dg~i~iw~~~ 460 (502)
-|...+.. ...+ +.-....+.+||..+.+.+.++.....+ .-+.-||++++|... ...++|.++|..
T Consensus 231 ~vw~~~~~~------~~~~-~~ig~~~v~v~d~~~wkvv~~I~~~G~g-lFi~thP~s~~vwvd~~~~~~~~~v~viD~~ 302 (369)
T PF02239_consen 231 PVWATSGLG------YFAI-PLIGTDPVSVHDDYAWKVVKTIPTQGGG-LFIKTHPDSRYVWVDTFLNPDADTVQVIDKK 302 (369)
T ss_dssp EEEEEEBSS------SSEE-EEEE--TTT-STTTBTSEEEEEE-SSSS---EE--TT-SEEEEE-TT-SSHT-EEEEECC
T ss_pred eEEeecccc------ceec-ccccCCccccchhhcCeEEEEEECCCCc-ceeecCCCCccEEeeccCCCCCceEEEEECc
Confidence 12211111 0121 2222346678999999999999877667 778889999999887 445899999999
Q ss_pred CCeeEEEEecCC--CEEEEEECCCCCEEEEEEC--CCeEEEEEe
Q 010759 461 EGKIVKTYTGNG--GIFEVCWNKEGDKIAACFA--NHTVCVLDF 500 (502)
Q Consensus 461 ~~~~~~~~~~~~--~i~~~~ws~~g~~la~~~~--~~~v~v~~~ 500 (502)
+.+.+.++.... .+.++.|++||+++-.+.. ++.|.|||-
T Consensus 303 tl~~~~~i~~~~~~~~~h~ef~~dG~~v~vS~~~~~~~i~v~D~ 346 (369)
T PF02239_consen 303 TLKVVKTITPGPGKRVVHMEFNPDGKEVWVSVWDGNGAIVVYDA 346 (369)
T ss_dssp GTEEEE-HHHHHT--EEEEEE-TTSSEEEEEEE--TTEEEEEET
T ss_pred CcceeEEEeccCCCcEeccEECCCCCEEEEEEecCCCEEEEEEC
Confidence 998888876433 4999999999996665544 346999984
No 206
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.70 E-value=2.9e-14 Score=128.46 Aligned_cols=275 Identities=24% Similarity=0.396 Sum_probs=178.2
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC-CEEEEEECC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLATGSYD 234 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-~~l~sg~~d 234 (502)
.+..++|++--..+|.+..|.+|++|+-... . ...++. .....|+|++|-|-+ .-|+.|..
T Consensus 100 dlr~~aWhqH~~~fava~nddvVriy~ksst-~----------pt~Lks------~sQrnvtclawRPlsaselavgCr- 161 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATNDDVVRIYDKSST-C----------PTKLKS------VSQRNVTCLAWRPLSASELAVGCR- 161 (445)
T ss_pred ceeeEeechhhhhhhhhccCcEEEEeccCCC-C----------Cceecc------hhhcceeEEEeccCCcceeeeeec-
Confidence 4678899986667889999999999985431 1 111221 124579999999965 45555554
Q ss_pred CcEEEEECCCce---------------eEeecCCCCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcceeEEeeecccC
Q 010759 235 GQARIWSTNGDL---------------KCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 235 g~i~iw~~~~~~---------------~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
+-|.||...... +..-.+| .+|+++.|+++|..+++++- |..|+|||+.++..+.
T Consensus 162 ~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~p-------- 232 (445)
T KOG2139|consen 162 AGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIP-------- 232 (445)
T ss_pred ceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCccc--------
Confidence 678999753211 1122344 68999999999999998875 5679999998875332
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 378 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 378 (502)
+.. -.-+.+.-+.|||||.+|++++-|+..++|..............
T Consensus 233 -------------------------------L~~--~glgg~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lg 279 (445)
T KOG2139|consen 233 -------------------------------LIP--KGLGGFSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILG 279 (445)
T ss_pred -------------------------------ccc--cCCCceeeEEEcCCCCEEEEecccceeeeehhcccceecceecc
Confidence 111 11345677999999999999999999999964433222222223
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC----CC--------e---EEEEe------eC---CCCCEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE----LG--------K---LLYSL------NG---HREPVY 434 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~----~~--------~---~~~~~------~~---h~~~v~ 434 (502)
.+.|.+.+|+|.|+ .+|.+.+..- ++|.+. .+ + ++..+ .+ ..+.+.
T Consensus 280 sgrvqtacWspcGs--------fLLf~~sgsp--~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq 349 (445)
T KOG2139|consen 280 SGRVQTACWSPCGS--------FLLFACSGSP--RLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQ 349 (445)
T ss_pred CCceeeeeecCCCC--------EEEEEEcCCc--eEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccc
Confidence 45899999999997 3555555433 333321 00 0 11111 11 135789
Q ss_pred EEEECCCCCEEEEEeCC--------CcEEEEeCCCCeeEEEE----ecCCCEEEEEECC---CCCEEEEEECCCeEEEEE
Q 010759 435 SLAFSPTGEYLASGSLD--------KSMHIWSLKEGKIVKTY----TGNGGIFEVCWNK---EGDKIAACFANHTVCVLD 499 (502)
Q Consensus 435 ~l~~spdg~~lasgs~D--------g~i~iw~~~~~~~~~~~----~~~~~i~~~~ws~---~g~~la~~~~~~~v~v~~ 499 (502)
+++|.|.|.|||+--.. ..|.+|+.+.--.+... .+....--++|+| +|..|..|-..|.+.-|.
T Consensus 350 ~lawDpsGeyLav~fKg~~~v~~~k~~i~~fdtr~sp~vels~cg~i~ge~P~~IsF~pl~n~g~lLsiaWsTGriq~yp 429 (445)
T KOG2139|consen 350 CLAWDPSGEYLAVIFKGQSFVLLCKLHISRFDTRKSPPVELSYCGMIGGEYPAYISFGPLKNEGRLLSIAWSTGRIQRYP 429 (445)
T ss_pred eeeECCCCCEEEEEEcCCchhhhhhhhhhhhcccccCceEEEecccccCCCCceEEeeecccCCcEEEEEeccCceEeee
Confidence 99999999999985433 34677777653332221 1111234566666 677888998899888776
Q ss_pred e
Q 010759 500 F 500 (502)
Q Consensus 500 ~ 500 (502)
+
T Consensus 430 l 430 (445)
T KOG2139|consen 430 L 430 (445)
T ss_pred e
Confidence 5
No 207
>KOG0644 consensus Uncharacterized conserved protein, contains WD40 repeat and BROMO domains [General function prediction only]
Probab=99.70 E-value=4.7e-17 Score=160.27 Aligned_cols=233 Identities=21% Similarity=0.397 Sum_probs=179.2
Q ss_pred eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCC
Q 010759 249 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGEN 327 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~ 327 (502)
.+.+|.++|+|+.|...|.++++|+.|..++||...+..+.....+|.+.+.++... ++..+++++.|..|++|.+..+
T Consensus 185 rLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~ 264 (1113)
T KOG0644|consen 185 RLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDG 264 (1113)
T ss_pred HHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCC
Confidence 467899999999999999999999999999999999999999999999999888764 5666788899999999999999
Q ss_pred cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee---ccc-CCCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 328 RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD---LRE-HSKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 328 ~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~---~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
.|+..+.||++.|++++|+|-- +.+.||++++||.+-.-.+.. +.. ....+-++.|...+. -+
T Consensus 265 ~pvsvLrghtgavtaiafsP~~----sss~dgt~~~wd~r~~~~~y~prp~~~~~~~~~~s~~~~~~~~---------~f 331 (1113)
T KOG0644|consen 265 APVSVLRGHTGAVTAIAFSPRA----SSSDDGTCRIWDARLEPRIYVPRPLKFTEKDLVDSILFENNGD---------RF 331 (1113)
T ss_pred chHHHHhccccceeeeccCccc----cCCCCCceEeccccccccccCCCCCCcccccceeeeecccccc---------cc
Confidence 9999999999999999999954 888999999999872111111 010 112344455544443 46
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECC
Q 010759 404 ASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT-GEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNK 481 (502)
Q Consensus 404 ~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-g~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~ 481 (502)
+||+.|+.-+.|...... .+...+.-+.++.+ ..+.+++-.+..+++|++.+|.+++...++. .++.+.++|
T Consensus 332 ~Tgs~d~ea~n~e~~~l~------~~~~~lif~t~ssd~~~~~~~ar~~~~~~vwnl~~g~l~H~l~ghsd~~yvLd~Hp 405 (1113)
T KOG0644|consen 332 LTGSRDGEARNHEFEQLA------WRSNLLIFVTRSSDLSSIVVTARNDHRLCVWNLYTGQLLHNLMGHSDEVYVLDVHP 405 (1113)
T ss_pred ccccCCcccccchhhHhh------hhccceEEEeccccccccceeeeeeeEeeeeecccchhhhhhcccccceeeeeecC
Confidence 889999988888654211 11111122222222 2466777788899999999999888877654 588999999
Q ss_pred CCCEEE-EEECCCeEEEEEe
Q 010759 482 EGDKIA-ACFANHTVCVLDF 500 (502)
Q Consensus 482 ~g~~la-~~~~~~~v~v~~~ 500 (502)
=..++| .+..||...|||+
T Consensus 406 fn~ri~msag~dgst~iwdi 425 (1113)
T KOG0644|consen 406 FNPRIAMSAGYDGSTIIWDI 425 (1113)
T ss_pred CCcHhhhhccCCCceEeeec
Confidence 776555 7788999999997
No 208
>KOG0771 consensus Prolactin regulatory element-binding protein/Protein transport protein SEC12p [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.70 E-value=5.9e-16 Score=142.19 Aligned_cols=195 Identities=24% Similarity=0.324 Sum_probs=142.0
Q ss_pred EEEEECCCCCEEEEEECCCcEEEEEC-CCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 217 TTLDWNGEGTLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 217 ~~l~~s~~~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
.+++|+++|..+++|+.||.+|||+. ..........|.+.|.+|.|+|+|..|++-+.| ..+||+++++..++....
T Consensus 148 k~vaf~~~gs~latgg~dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d-~~~VW~~~~g~~~a~~t~- 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGTDGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGAD-SARVWSVNTGAALARKTP- 225 (398)
T ss_pred eEEEEcCCCCEeeeccccceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCC-ceEEEEeccCchhhhcCC-
Confidence 78999999999999999999999994 444455677899999999999999999999999 999999998844332210
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-----CEEEEEeCCCcEEEEeCCCCc
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-----SLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-----~~l~sgs~dg~i~iwd~~~~~ 370 (502)
+.. ......+.|+.|+ .+++....-+.|+.|++....
T Consensus 226 --------~~k------------------------------~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~ 267 (398)
T KOG0771|consen 226 --------FSK------------------------------DEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWS 267 (398)
T ss_pred --------ccc------------------------------chhhhhceecccCCCceEEEEEecCCCCceeEEEeeeec
Confidence 000 0011223333333 122222233344444432211
Q ss_pred -----eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCE
Q 010759 371 -----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEY 444 (502)
Q Consensus 371 -----~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~ 444 (502)
...........|.+++.+++|. +++.|+.||.|-|++..+.+.++.. ..|...|+.|.|+||.++
T Consensus 268 ~~~~l~~~~~~~~~~siSsl~VS~dGk---------f~AlGT~dGsVai~~~~~lq~~~~vk~aH~~~VT~ltF~Pdsr~ 338 (398)
T KOG0771|consen 268 GSNFLRLRKKIKRFKSISSLAVSDDGK---------FLALGTMDGSVAIYDAKSLQRLQYVKEAHLGFVTGLTFSPDSRY 338 (398)
T ss_pred cccccchhhhhhccCcceeEEEcCCCc---------EEEEeccCCcEEEEEeceeeeeEeehhhheeeeeeEEEcCCcCc
Confidence 1112222345789999999997 8999999999999999988877654 679999999999999999
Q ss_pred EEEEeCCCcEEEEeCC
Q 010759 445 LASGSLDKSMHIWSLK 460 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~ 460 (502)
+++-+.|..+.|..+.
T Consensus 339 ~~svSs~~~~~v~~l~ 354 (398)
T KOG0771|consen 339 LASVSSDNEAAVTKLA 354 (398)
T ss_pred ccccccCCceeEEEEe
Confidence 9999999998888765
No 209
>KOG1272 consensus WD40-repeat-containing subunit of the 18S rRNA processing complex [RNA processing and modification]
Probab=99.69 E-value=1.2e-16 Score=147.89 Aligned_cols=268 Identities=18% Similarity=0.222 Sum_probs=203.1
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
+-+.+.|+.+|++|+.||.-|.|-.+|+.++.... --. -...|.++.|-.+.++||++- ..
T Consensus 131 GPY~~~ytrnGrhlllgGrKGHlAa~Dw~t~~L~~-----------Ei~-------v~Etv~Dv~~LHneq~~AVAQ-K~ 191 (545)
T KOG1272|consen 131 GPYHLDYTRNGRHLLLGGRKGHLAAFDWVTKKLHF-----------EIN-------VMETVRDVTFLHNEQFFAVAQ-KK 191 (545)
T ss_pred CCeeeeecCCccEEEecCCccceeeeecccceeee-----------eee-------hhhhhhhhhhhcchHHHHhhh-hc
Confidence 34668899999999999999999999987764211 000 123588888988888888765 47
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEc
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSS 314 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 314 (502)
.++|||-.|.....+..| ..|..+.|.|..-.|++++..|.++.-|+.+|+.+..+....+.+..+.-.+ +..+-++.
T Consensus 192 y~yvYD~~GtElHClk~~-~~v~rLeFLPyHfLL~~~~~~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~Gh 270 (545)
T KOG1272|consen 192 YVYVYDNNGTELHCLKRH-IRVARLEFLPYHFLLVAASEAGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGH 270 (545)
T ss_pred eEEEecCCCcEEeehhhc-CchhhhcccchhheeeecccCCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcC
Confidence 899999888777767665 5789999999988888999999999999999999888877777665554433 44556788
Q ss_pred CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCC
Q 010759 315 TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT 394 (502)
Q Consensus 315 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~ 394 (502)
..|+|.+|.-....|+..+..|.++|.+|++.++|.++||.+.|..++|||++.-..++++.. ..+...+++|..|
T Consensus 271 snGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~t-p~~a~~ls~Sqkg--- 346 (545)
T KOG1272|consen 271 SNGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRT-PHPASNLSLSQKG--- 346 (545)
T ss_pred CCceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeeccccccceeec-CCCcccccccccc---
Confidence 999999999998888888889999999999999999999999999999999998877666654 3455667777665
Q ss_pred CCCCCcEEEEEEeCCCeEEEEe-CCCCe--EEEEeeCC--CCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 395 NNPNQQLILASASFDSTVKLWD-VELGK--LLYSLNGH--REPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 395 ~~~~~~~~l~sgs~dg~i~iwd-~~~~~--~~~~~~~h--~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
+|| .+....|.||. .-.+. .-..+..| .++|..|.|.|-...|-.|-.-|.-.
T Consensus 347 -------lLA-~~~G~~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP~EDvLGIGH~~G~ts 404 (545)
T KOG1272|consen 347 -------LLA-LSYGDHVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCPYEDVLGIGHAGGITS 404 (545)
T ss_pred -------cee-eecCCeeeeehhhhcCCCCCCcchhhhccCcccccceeccHHHeeeccccCCcee
Confidence 344 55566899994 22211 11111122 35899999999776666665555333
No 210
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.69 E-value=1.1e-14 Score=132.52 Aligned_cols=275 Identities=16% Similarity=0.248 Sum_probs=191.0
Q ss_pred ccceeEEEECCCCC--EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 154 TSEVCACAWSPAGS--LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 154 ~~~V~~~~~spd~~--~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
...|..++|.-+++ .|...+.|..+.+..+......... ..++.. ....++|..++... ..|++|
T Consensus 55 ~~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~-------~~~~~~----~l~~~~I~gl~~~d--g~Litc 121 (412)
T KOG3881|consen 55 LDRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSL-------DDAKTV----SLGTKSIKGLKLAD--GTLITC 121 (412)
T ss_pred hhhhhhheeecCCceeEeeccccCcccccccccCCcccccc-------cccccc----ccccccccchhhcC--CEEEEE
Confidence 34577788876654 5555557777777776554322110 011111 11234555555442 367788
Q ss_pred ECCCcEEEEECC-----CceeEeecCCCCCEEEEEecCCCCEEE-EecCC--CeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 232 SYDGQARIWSTN-----GDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCD--KTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 232 ~~dg~i~iw~~~-----~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D--~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
-.+|.+.+|... ......+..+ ..+..+.-++...+|+ +|+.. ..+++||+... .+.|.....+.-.+
T Consensus 122 ~~sG~l~~~~~k~~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~--~qiw~aKNvpnD~L- 197 (412)
T KOG3881|consen 122 VSSGNLQVRHDKSGDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQS--KQIWSAKNVPNDRL- 197 (412)
T ss_pred ecCCcEEEEeccCCccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccc--eeeeeccCCCCccc-
Confidence 899999999876 3333334433 5567777777666655 58888 78999999876 44443322211000
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCC-ceeeecccCCC
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQD-KYVHDLREHSK 380 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~ 380 (502)
+-.+.+| ++.+.|-+. ...||+++.-+.+|+||.+.+ +++..|.....
T Consensus 198 ------------~LrVPvW-----------------~tdi~Fl~g~~~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~ 248 (412)
T KOG3881|consen 198 ------------GLRVPVW-----------------ITDIRFLEGSPNYKFATITRYHQVRLYDTRHQRRPVAQFDFLEN 248 (412)
T ss_pred ------------cceeeee-----------------eccceecCCCCCceEEEEecceeEEEecCcccCcceeEeccccC
Confidence 1122333 345667665 778999999999999999865 45777777778
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
++.++...|.+. ++.+|..-|.+..||++.++.+.. +.+..+.|++|..+|.+++||++|-|..|+|+|+
T Consensus 249 ~is~~~l~p~gn---------~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~las~GLDRyvRIhD~ 319 (412)
T KOG3881|consen 249 PISSTGLTPSGN---------FIYTGNTKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPVLASCGLDRYVRIHDI 319 (412)
T ss_pred cceeeeecCCCc---------EEEEecccchhheecccCceeeccccCCccCCcceEEEcCCCceEEeeccceeEEEeec
Confidence 899998888885 688999999999999999998877 8899999999999999999999999999999999
Q ss_pred CCCeeEEEEecCCCEEEEEECCCC
Q 010759 460 KEGKIVKTYTGNGGIFEVCWNKEG 483 (502)
Q Consensus 460 ~~~~~~~~~~~~~~i~~~~ws~~g 483 (502)
.+.+++....-...++.+-+.++-
T Consensus 320 ktrkll~kvYvKs~lt~il~~~~~ 343 (412)
T KOG3881|consen 320 KTRKLLHKVYVKSRLTFILLRDDV 343 (412)
T ss_pred ccchhhhhhhhhccccEEEecCCc
Confidence 997776555445556666665543
No 211
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.68 E-value=1.3e-15 Score=143.50 Aligned_cols=196 Identities=19% Similarity=0.332 Sum_probs=142.0
Q ss_pred CCCCCEEEEEECCCcEEEEECCCceeEe-e----cCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 222 NGEGTLLATGSYDGQARIWSTNGDLKCT-L----SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~~~~~~-~----~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
.+.+--++.|-..|.|.+.+........ + .-.+..|++++|-|.+ ..|+.+-.+|.+.+||..... .
T Consensus 182 ~~~g~dllIGf~tGqvq~idp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~-------~ 254 (636)
T KOG2394|consen 182 TPKGLDLLIGFTTGQVQLIDPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC-------G 254 (636)
T ss_pred CCCCcceEEeeccCceEEecchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccc-------c
Confidence 3566778888888999988754321111 1 1124789999999966 467788889999999862110 0
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcC-CCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
........+.....|. |..|.-. ...|+..+.--.+.|+..+|+|||++||+.+.||.+||||..+..++..
T Consensus 255 ~t~p~~~~~k~~~~f~-------i~t~ksk~~rNPv~~w~~~~g~in~f~FS~DG~~LA~VSqDGfLRvF~fdt~eLlg~ 327 (636)
T KOG2394|consen 255 ATAPSYQALKDGDQFA-------ILTSKSKKTRNPVARWHIGEGSINEFAFSPDGKYLATVSQDGFLRIFDFDTQELLGV 327 (636)
T ss_pred CCCCcccccCCCCeeE-------EeeeeccccCCccceeEeccccccceeEcCCCceEEEEecCceEEEeeccHHHHHHH
Confidence 0000000011111111 1122111 1134444443456899999999999999999999999999999888888
Q ss_pred cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 375 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
++..-+...|++|||||+ ||++|+.|.-|.||.+..++++..=.+|+.+|+.|+|.|
T Consensus 328 mkSYFGGLLCvcWSPDGK---------yIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFDp 384 (636)
T KOG2394|consen 328 MKSYFGGLLCVCWSPDGK---------YIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFDP 384 (636)
T ss_pred HHhhccceEEEEEcCCcc---------EEEecCCcceEEEEEeccceEEEeccccccceeeEeecc
Confidence 887788999999999997 899999999999999999999999999999999999987
No 212
>KOG1445 consensus Tumor-specific antigen (contains WD repeats) [Cytoskeleton]
Probab=99.68 E-value=9.2e-16 Score=146.98 Aligned_cols=233 Identities=18% Similarity=0.313 Sum_probs=169.7
Q ss_pred CCCEEEE--EECCCcEEEEECCC--ce----eEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 224 EGTLLAT--GSYDGQARIWSTNG--DL----KCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 224 ~~~~l~s--g~~dg~i~iw~~~~--~~----~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
+..+++. ++.-|.|-||+++. .+ ...+. ....|+.+.|.| +.++|+.++.||.|++|.+..+.....
T Consensus 590 n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~-Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr~~a~gl~e~--- 665 (1012)
T KOG1445|consen 590 NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLF-NGTLVTDLHWDPFDDERLAVATDDGQINLWRLTANGLPEN--- 665 (1012)
T ss_pred ccceEEEEecCCCceEEEEEcCCCCCCCcccccccc-cCceeeecccCCCChHHeeecccCceEEEEEeccCCCCcc---
Confidence 3444443 45568999998752 21 11222 345789999999 557899999999999998876532211
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceee
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVH 373 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~~~~~ 373 (502)
...|-..+.+|...|+++.|||- ...|++++.|.+|++||+.+.+...
T Consensus 666 -------------------------------~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~lWDl~~~~~~~ 714 (1012)
T KOG1445|consen 666 -------------------------------EMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIELWDLANAKLYS 714 (1012)
T ss_pred -------------------------------cCCcceeeecccceEEEEEecchhhhHhhhhhccceeeeeehhhhhhhh
Confidence 12355677889999999999995 4678999999999999999999999
Q ss_pred ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCC-CCEEEEEECCCCCEEEEEeCC
Q 010759 374 DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHR-EPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 374 ~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~-~~v~~l~~spdg~~lasgs~D 451 (502)
.+.+|...|..++|||+|. .+|+.+.||+|++|+.+++. .+++-++-. ..--.|.|.-+|+++++.|.|
T Consensus 715 ~l~gHtdqIf~~AWSpdGr---------~~AtVcKDg~~rVy~Prs~e~pv~Eg~gpvgtRgARi~wacdgr~viv~Gfd 785 (1012)
T KOG1445|consen 715 RLVGHTDQIFGIAWSPDGR---------RIATVCKDGTLRVYEPRSREQPVYEGKGPVGTRGARILWACDGRIVIVVGFD 785 (1012)
T ss_pred eeccCcCceeEEEECCCCc---------ceeeeecCceEEEeCCCCCCCccccCCCCccCcceeEEEEecCcEEEEeccc
Confidence 9999999999999999997 79999999999999998764 344433221 223457898999999988877
Q ss_pred C----cEEEEeCCCCe--eEEEE--ecCCCEEEEEECCCCC-EEEEEECCCeEEEEEe
Q 010759 452 K----SMHIWSLKEGK--IVKTY--TGNGGIFEVCWNKEGD-KIAACFANHTVCVLDF 500 (502)
Q Consensus 452 g----~i~iw~~~~~~--~~~~~--~~~~~i~~~~ws~~g~-~la~~~~~~~v~v~~~ 500 (502)
. .|.+|+..+-. .+.+. .-...+.-..+.+|.+ .+++|-.|..|..|.+
T Consensus 786 k~SeRQv~~Y~Aq~l~~~pl~t~~lDvaps~LvP~YD~Ds~~lfltGKGD~~v~~yEv 843 (1012)
T KOG1445|consen 786 KSSERQVQMYDAQTLDLRPLYTQVLDVAPSPLVPHYDYDSNVLFLTGKGDRFVNMYEV 843 (1012)
T ss_pred ccchhhhhhhhhhhccCCcceeeeecccCccccccccCCCceEEEecCCCceEEEEEe
Confidence 4 68899876532 22222 1112223334566665 5667888889988875
No 213
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.68 E-value=1.6e-14 Score=148.30 Aligned_cols=303 Identities=18% Similarity=0.263 Sum_probs=195.1
Q ss_pred CceeeccccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 145 SDVTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
..++.|..|...|..++.++.. .+++|||.||+||+|++..-...... . ...-.+......+.++.+-+
T Consensus 1039 ~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s----~------rS~ltys~~~sr~~~vt~~~ 1108 (1431)
T KOG1240|consen 1039 ILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGS----A------RSELTYSPEGSRVEKVTMCG 1108 (1431)
T ss_pred eEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcce----e------eeeEEEeccCCceEEEEecc
Confidence 4467888899999999988875 89999999999999997542211000 0 00111222356789999999
Q ss_pred CCCEEEEEECCCcEEEEECCCc--ee------EeecCC-CCCEEEE-EecC--CCCEEEEecCCCeEEEEeccCccee--
Q 010759 224 EGTLLATGSYDGQARIWSTNGD--LK------CTLSKH-KGPIFSL-KWNK--KGDYLLTGSCDKTAIVWDVKTEEWK-- 289 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~--~~------~~~~~h-~~~V~~l-~~~~--~~~~l~sgs~D~~v~iwd~~~~~~~-- 289 (502)
.+..+|.++.||.|++.+++.. .. .....+ .+.|..+ +|.. ....++.+..-+.|..||+++....
T Consensus 1109 ~~~~~Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~ 1188 (1431)
T KOG1240|consen 1109 NGDQFAVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWR 1188 (1431)
T ss_pred CCCeEEEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHh
Confidence 9999999999999999987641 11 011112 2333333 3322 2246777888899999999876533
Q ss_pred EEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcCCCC---E-EEEEe-CCCcEE
Q 010759 290 QQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGS---L-LASCS-DDVTAK 362 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~---~-l~sgs-~dg~i~ 362 (502)
.+.....+.+.++.... ..-++.|...|.+.+||++-+.++..+. ++..++..+..+|..+ . +.+++ ..+.|.
T Consensus 1189 lk~~~~hG~vTSi~idp~~~WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs 1268 (1431)
T KOG1240|consen 1189 LKNQLRHGLVTSIVIDPWCNWLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVS 1268 (1431)
T ss_pred hhcCccccceeEEEecCCceEEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCcee
Confidence 33344456666665543 3367788899999999999888877654 4556777777766543 3 44444 577899
Q ss_pred EEeCCCCceeeecccC-CCcEEEEEEccCC-------C---CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE--------
Q 010759 363 IWNMKQDKYVHDLREH-SKEIYTIRWSPTG-------S---GTNNPNQQLILASASFDSTVKLWDVELGKLL-------- 423 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~-~~~i~~~~~sp~g-------~---~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-------- 423 (502)
+|++.++.+...+... ..+...- ..|.. . ...-+...-++.+|+.|..||.||.......
T Consensus 1269 ~wn~~~g~~~~vl~~s~~~p~ls~-~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~~~p~~ss~~~~~~s 1347 (1431)
T KOG1240|consen 1269 TWNMETGLRQTVLWASDGAPILSY-ALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDPTRPEISSYAVPGPS 1347 (1431)
T ss_pred eeecccCcceEEEEcCCCCcchhh-hcccccCCCCCcccceeeecccCCceeeecCCccceeeccCCCcccccccccCcc
Confidence 9999988665555433 1111110 01111 0 0001112236889999999999996431100
Q ss_pred ---------------------EE---------------------------eeCCCCCEEEEEECCCC-CEEEEEeCCCcE
Q 010759 424 ---------------------YS---------------------------LNGHREPVYSLAFSPTG-EYLASGSLDKSM 454 (502)
Q Consensus 424 ---------------------~~---------------------------~~~h~~~v~~l~~spdg-~~lasgs~Dg~i 454 (502)
.. -..|..+|+++++-... .+|++++.||.|
T Consensus 1348 ~~~~~~~~s~~~~~i~~~~~i~e~i~~~~tv~~t~~~~~~~~~~~~~~~ps~~H~d~Itdma~~~~~q~llvs~s~dG~I 1427 (1431)
T KOG1240|consen 1348 TSYSTNSESYDLSTIPGSQFIDEFIIYQQTVGLTEALRENQKLRPGPSDPSTYHHDPITDMATLKSEQPLLVSSSRDGVI 1427 (1431)
T ss_pred ccccccchhccccccCCCccchhhhhhhhhcCchhhcccccccccCCCCCcccccchhhhhhhhccCccEEEEecCCCee
Confidence 00 01477889999876543 588999999999
Q ss_pred EEEe
Q 010759 455 HIWS 458 (502)
Q Consensus 455 ~iw~ 458 (502)
+||.
T Consensus 1428 kiWk 1431 (1431)
T KOG1240|consen 1428 KIWK 1431 (1431)
T ss_pred eecC
Confidence 9993
No 214
>KOG1334 consensus WD40 repeat protein [General function prediction only]
Probab=99.68 E-value=6.2e-16 Score=144.10 Aligned_cols=282 Identities=21% Similarity=0.346 Sum_probs=212.2
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-c-eeEeecCCCCCEEEEEecCCC--CEEEEecCCCeEEEEecc
Q 010759 209 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-D-LKCTLSKHKGPIFSLKWNKKG--DYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~-~~~~~~~h~~~V~~l~~~~~~--~~l~sgs~D~~v~iwd~~ 284 (502)
...|.+.|..+.|+..|..|+||+.|..|.+||... . ......+|...|...+|-|.. ..+++++.||.+++=.+.
T Consensus 138 L~~H~GcVntV~FN~~Gd~l~SgSDD~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~ 217 (559)
T KOG1334|consen 138 LNKHKGCVNTVHFNQRGDVLASGSDDLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL 217 (559)
T ss_pred ccCCCCccceeeecccCceeeccCccceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeec
Confidence 456788899999999999999999999999999643 2 333457899999999998854 569999999999988754
Q ss_pred Cccee---EEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCcceeeec---CCCc---ceeEEEEcCCCC-EE
Q 010759 285 TEEWK---QQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFA---GHQG---EVNCVKWDPTGS-LL 352 (502)
Q Consensus 285 ~~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~---~h~~---~v~~v~~~p~~~-~l 352 (502)
...++ ..+..|.+++..+.. .....|.+++.|+.+.-+|++...|...+. .+.. ....++..|-.. .+
T Consensus 218 ~t~~~e~t~rl~~h~g~vhklav~p~sp~~f~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~nt~~f 297 (559)
T KOG1334|consen 218 ETGYVENTKRLAPHEGPVHKLAVEPDSPKPFLSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPRNTNEF 297 (559)
T ss_pred cccceecceecccccCccceeeecCCCCCcccccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCCCcccc
Confidence 33322 244567788766554 455678999999999999998877654443 2223 457888888765 79
Q ss_pred EEEeCCCcEEEEeCCCCc------eeeecc------cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-
Q 010759 353 ASCSDDVTAKIWNMKQDK------YVHDLR------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL- 419 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~------~~~~~~------~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~- 419 (502)
++|+.|-.+++||.+.-. .+..+- ...-.|++++|+.++.. +| +...|-.|+++.-..
T Consensus 298 aVgG~dqf~RvYD~R~~~~e~~n~~~~~f~p~hl~~d~~v~ITgl~Ysh~~sE--------lL-aSYnDe~IYLF~~~~~ 368 (559)
T KOG1334|consen 298 AVGGSDQFARVYDQRRIDKEENNGVLDKFCPHHLVEDDPVNITGLVYSHDGSE--------LL-ASYNDEDIYLFNKSMG 368 (559)
T ss_pred ccCChhhhhhhhcccchhhccccchhhhcCCccccccCcccceeEEecCCccc--------ee-eeecccceEEeccccc
Confidence 999999999999976321 122222 12345899999977752 34 455677899985432
Q ss_pred -C----------eEEE-EeeCCCC--CEEEEE-ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCC
Q 010759 420 -G----------KLLY-SLNGHRE--PVYSLA-FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEG 483 (502)
Q Consensus 420 -~----------~~~~-~~~~h~~--~v~~l~-~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g 483 (502)
| ..+. .++||.. .|-.+- |.|...|+++||.-|.|.||+-+++++++.+.+. ..|++|.=+|--
T Consensus 369 ~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvSGSDCGhIFiW~K~t~eii~~MegDr~VVNCLEpHP~~ 448 (559)
T KOG1334|consen 369 DGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVSGSDCGHIFIWDKKTGEIIRFMEGDRHVVNCLEPHPHL 448 (559)
T ss_pred cCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEecCccceEEEEecchhHHHHHhhcccceEeccCCCCCC
Confidence 2 1222 3788864 366664 5788999999999999999999999999888764 468899999999
Q ss_pred CEEEEEECCCeEEEEE
Q 010759 484 DKIAACFANHTVCVLD 499 (502)
Q Consensus 484 ~~la~~~~~~~v~v~~ 499 (502)
-.||+++-+..|+||.
T Consensus 449 PvLAsSGid~DVKIWT 464 (559)
T KOG1334|consen 449 PVLASSGIDHDVKIWT 464 (559)
T ss_pred chhhccCCccceeeec
Confidence 9999999999999994
No 215
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.67 E-value=9.6e-15 Score=128.55 Aligned_cols=150 Identities=21% Similarity=0.513 Sum_probs=110.8
Q ss_pred eEEEEcCCCCEEEEEeC----------CCcEEEEeCCC-Cceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 341 NCVKWDPTGSLLASCSD----------DVTAKIWNMKQ-DKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~----------dg~i~iwd~~~-~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
..+.|+|.|.+|+.-.. -+...||.++. +..+..+.. ..++|..++|+|+|. +..+++|..
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~-------~favi~g~~ 81 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGN-------EFAVIYGSM 81 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCC-------EEEEEEccC
Confidence 35788999887654333 12355555532 223333332 345799999999986 234566777
Q ss_pred CCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCE
Q 010759 409 DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDK 485 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~ 485 (502)
++.|.|||++ ++.+..+. ...++.|.|||+|++||+|+.+ |.|.+||+.+.+.+.++... .+..++|+|||++
T Consensus 82 ~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~-~~t~~~WsPdGr~ 157 (194)
T PF08662_consen 82 PAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHS-DATDVEWSPDGRY 157 (194)
T ss_pred CcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccC-cEEEEEEcCCCCE
Confidence 8899999997 77777764 4678999999999999998754 66999999998888877543 5789999999999
Q ss_pred EEEEEC------CCeEEEEEee
Q 010759 486 IAACFA------NHTVCVLDFR 501 (502)
Q Consensus 486 la~~~~------~~~v~v~~~~ 501 (502)
|+++.. |..+.||++.
T Consensus 158 ~~ta~t~~r~~~dng~~Iw~~~ 179 (194)
T PF08662_consen 158 LATATTSPRLRVDNGFKIWSFQ 179 (194)
T ss_pred EEEEEeccceeccccEEEEEec
Confidence 998864 5678899863
No 216
>KOG1188 consensus WD40 repeat protein [General function prediction only]
Probab=99.67 E-value=2.6e-15 Score=134.20 Aligned_cols=185 Identities=21% Similarity=0.378 Sum_probs=143.8
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeee--cccCC-CcE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHD--LREHS-KEI 382 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~--~~~~~-~~i 382 (502)
..++++-..+.|++++..+++.+..|.++...++.+.|.. ....+.+|+.||+|++||++....... +..+. .+.
T Consensus 41 ~~vav~lSngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f 120 (376)
T KOG1188|consen 41 TAVAVSLSNGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQSGTPF 120 (376)
T ss_pred eeEEEEecCCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCCCCcc
Confidence 3467778889999999999999999999999999999976 467799999999999999987654433 33333 344
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEe----CCCeEEEEeCCCCeE-EEE-eeCCCCCEEEEEECCCC-CEEEEEeCCCcEE
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASAS----FDSTVKLWDVELGKL-LYS-LNGHREPVYSLAFSPTG-EYLASGSLDKSMH 455 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs----~dg~i~iwd~~~~~~-~~~-~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~ 455 (502)
.+++....+ .++++|. .+-.|.+||++..+. +.. ...|.+-|++|.|+|.. .+|+|||.||.|.
T Consensus 121 ~~ld~nck~---------~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~~pnlLlSGSvDGLvn 191 (376)
T KOG1188|consen 121 ICLDLNCKK---------NIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPSDPNLLLSGSVDGLVN 191 (376)
T ss_pred eEeeccCcC---------CeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCCCCCeEEeecccceEE
Confidence 444433222 2566664 366799999998766 444 46799999999999975 7899999999999
Q ss_pred EEeCCCC----eeEEEEecCCCEEEEEECCCC-CEEEEEECCCeEEEEEee
Q 010759 456 IWSLKEG----KIVKTYTGNGGIFEVCWNKEG-DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~----~~~~~~~~~~~i~~~~ws~~g-~~la~~~~~~~v~v~~~~ 501 (502)
|||++.- .++.++.....|-.+.|..++ ++|..-+...+..+|++.
T Consensus 192 lfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ykrI~clTH~Etf~~~ele 242 (376)
T KOG1188|consen 192 LFDTKKDNEEDALLHVINHGSSIHLIGWLSKKYKRIMCLTHMETFAIYELE 242 (376)
T ss_pred eeecCCCcchhhHHHhhcccceeeeeeeecCCcceEEEEEccCceeEEEcc
Confidence 9999753 355666666679999999887 667777888999999874
No 217
>KOG2139 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=3e-14 Score=128.37 Aligned_cols=242 Identities=19% Similarity=0.362 Sum_probs=160.6
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecC-CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~-h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
...+..++|++.-..|+++..|-.|++|+........+.. ....|++++|.|.+..-++.+.-+-|.+|.......
T Consensus 98 ~~dlr~~aWhqH~~~fava~nddvVriy~ksst~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln--- 174 (445)
T KOG2139|consen 98 EIDLRGVAWHQHIIAFAVATNDDVVRIYDKSSTCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLN--- 174 (445)
T ss_pred hcceeeEeechhhhhhhhhccCcEEEEeccCCCCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccc---
Confidence 3457889999988889999999999999987655444432 346799999999875444444456689997532110
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCc
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDK 370 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~~~~ 370 (502)
...+ ++.... ....+....|| .+|++++|.+||..+++++. |..|.|||..++.
T Consensus 175 ----~~r~-------------------~~~~s~-~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~ 229 (445)
T KOG2139|consen 175 ----ANRN-------------------IRMMST-HHLQVLQDPGH-NPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQ 229 (445)
T ss_pred ----cccc-------------------cccccc-cchhheeCCCC-ceeeEEEEcCCCCEEeecccCcceEEEEcCCCCC
Confidence 0000 000000 00112233455 68999999999999999886 5689999999887
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCCCEEEE-E
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLAS-G 448 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~las-g 448 (502)
.+.-.....+.+.-+.|||++. +|+.+..|+..++|+... .....-.. ..+.|...+|+|+|++|.- .
T Consensus 230 ~~pL~~~glgg~slLkwSPdgd---------~lfaAt~davfrlw~e~q~wt~erw~l-gsgrvqtacWspcGsfLLf~~ 299 (445)
T KOG2139|consen 230 KIPLIPKGLGGFSLLKWSPDGD---------VLFAATCDAVFRLWQENQSWTKERWIL-GSGRVQTACWSPCGSFLLFAC 299 (445)
T ss_pred cccccccCCCceeeEEEcCCCC---------EEEEecccceeeeehhcccceecceec-cCCceeeeeecCCCCEEEEEE
Confidence 7654444556788999999997 778889999999996543 22222222 3458999999999987654 3
Q ss_pred eCCCcEEEEeCC--C--C--------eeEE---------EEec----CCCEEEEEECCCCCEEEEEECCCe
Q 010759 449 SLDKSMHIWSLK--E--G--------KIVK---------TYTG----NGGIFEVCWNKEGDKIAACFANHT 494 (502)
Q Consensus 449 s~Dg~i~iw~~~--~--~--------~~~~---------~~~~----~~~i~~~~ws~~g~~la~~~~~~~ 494 (502)
+..- .+|.+. . + +.+. +..+ -+.+-+++|.|.|.+||+-+..+.
T Consensus 300 sgsp--~lysl~f~~~~~~~~~~~~~k~~lliaDL~e~ti~ag~~l~cgeaq~lawDpsGeyLav~fKg~~ 368 (445)
T KOG2139|consen 300 SGSP--RLYSLTFDGEDSVFLRPQSIKRVLLIADLQEVTICAGQRLCCGEAQCLAWDPSGEYLAVIFKGQS 368 (445)
T ss_pred cCCc--eEEEEeecCCCccccCcccceeeeeeccchhhhhhcCcccccCccceeeECCCCCEEEEEEcCCc
Confidence 3333 333321 1 1 0110 0112 245788999999999999887554
No 218
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.66 E-value=1.1e-13 Score=138.89 Aligned_cols=213 Identities=13% Similarity=0.141 Sum_probs=145.9
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecC---CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~---D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
..|.+||..+.....+..|...+.+.+|+|+|+.|+..+. +..|.+||+.+++..
T Consensus 182 ~~l~~~d~dg~~~~~lt~~~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~---------------------- 239 (435)
T PRK05137 182 KRLAIMDQDGANVRYLTDGSSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRE---------------------- 239 (435)
T ss_pred eEEEEECCCCCCcEEEecCCCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEE----------------------
Confidence 4788888887777777888889999999999998877653 467888888765421
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
.+..+.+.+.+.+|+|||+.|+ +.+.++. |.+||+.++.. ..+..+........|+
T Consensus 240 --------------------~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~s 298 (435)
T PRK05137 240 --------------------LVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYS 298 (435)
T ss_pred --------------------EeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCce-EEccCCCCccCceeEc
Confidence 1122334456789999998765 5566665 67778877654 3455555556778999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEeCCCCe
Q 010759 389 PTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGK 463 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~ 463 (502)
|+|. .++++...+| .|.+||+..+.. ..+..+...+....|||||++|+..+.+ ..|.+|++.++.
T Consensus 299 pDG~--------~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~ 369 (435)
T PRK05137 299 PDGS--------QIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG 369 (435)
T ss_pred CCCC--------EEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc
Confidence 9986 2333332333 688888876544 3444344557778999999999876653 368888886554
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECC------CeEEEEEe
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFAN------HTVCVLDF 500 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~------~~v~v~~~ 500 (502)
. ..+.....+..++|+|||+.|+....+ ..+.++|+
T Consensus 370 ~-~~lt~~~~~~~p~~spDG~~i~~~~~~~~~~~~~~L~~~dl 411 (435)
T PRK05137 370 E-RILTSGFLVEGPTWAPNGRVIMFFRQTPGSGGAPKLYTVDL 411 (435)
T ss_pred e-EeccCCCCCCCCeECCCCCEEEEEEccCCCCCcceEEEEEC
Confidence 3 334333356788999999998876653 24666665
No 219
>KOG4227 consensus WD40 repeat protein [General function prediction only]
Probab=99.66 E-value=6.9e-14 Score=127.07 Aligned_cols=278 Identities=17% Similarity=0.284 Sum_probs=193.4
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-------eeEe-ecCCCCCEEEEEecCCCCEEEEecCCCeEEEE
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-------LKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 281 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-------~~~~-~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iw 281 (502)
.+|.+.|.++.||.++++|++|+.|..+++|.++.- .+.. -..|...|++|+|...+..+++|..+++|.+.
T Consensus 53 ~~H~GCiNAlqFS~N~~~L~SGGDD~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 53 REHTGCINALQFSHNDRFLASGGDDMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH 132 (609)
T ss_pred hhhccccceeeeccCCeEEeecCCcceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence 356788999999999999999999999999986531 1111 13466899999999999999999999999999
Q ss_pred eccCcceeEEeeec--ccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCc-ceeee--cCCCcceeEEEEcCCC-CEEEE
Q 010759 282 DVKTEEWKQQFEFH--SGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENR-PIKTF--AGHQGEVNCVKWDPTG-SLLAS 354 (502)
Q Consensus 282 d~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~-~~~~~--~~h~~~v~~v~~~p~~-~~l~s 354 (502)
|+.+.+.+-.+... .+.|..++.. .+..|++.+.++.|.+|+.+... ++..+ .........+-|+|.. .+|++
T Consensus 133 DiEt~qsi~V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~ 212 (609)
T KOG4227|consen 133 DIETKQSIYVANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILV 212 (609)
T ss_pred ecccceeeeeecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEe
Confidence 99998766554332 2456666543 36678899999999999998755 43322 2233456788899965 57888
Q ss_pred EeCCCcEEEEeCCCCce-ee------ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEe
Q 010759 355 CSDDVTAKIWNMKQDKY-VH------DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSL 426 (502)
Q Consensus 355 gs~dg~i~iwd~~~~~~-~~------~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~ 426 (502)
.+..+-+.+||.+.... +. .+......-.++.|+|.|. .|++--....-.+||+-+.++ ++.+
T Consensus 213 ~~~~~G~~~~D~R~~~~~~~~~~~~~~L~~~~~~~M~~~~~~~G~---------Q~msiRR~~~P~~~D~~S~R~~V~k~ 283 (609)
T KOG4227|consen 213 NSETGGPNVFDRRMQARPVYQRSMFKGLPQENTEWMGSLWSPSGN---------QFMSIRRGKCPLYFDFISQRCFVLKS 283 (609)
T ss_pred ccccCCCCceeeccccchHHhhhccccCcccchhhhheeeCCCCC---------eehhhhccCCCEEeeeecccceeEec
Confidence 99999999999875421 11 1111122236788999885 233322233344566655333 3333
Q ss_pred eCCC-------CCEEEEEECCCCCEEEEEeCCCcEEEEeCCC----Ce-------------------eEEEEecCCC-EE
Q 010759 427 NGHR-------EPVYSLAFSPTGEYLASGSLDKSMHIWSLKE----GK-------------------IVKTYTGNGG-IF 475 (502)
Q Consensus 427 ~~h~-------~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~----~~-------------------~~~~~~~~~~-i~ 475 (502)
. |. ..|.+++|--|- -+++||.+=.|+||.+.. +. .+..+.++.. ++
T Consensus 284 D-~N~~GY~N~~T~KS~~F~~D~-~v~tGSD~~~i~~WklP~~~ds~G~~~IG~~~~~~~~~~~i~~~~~VLrGHRSv~N 361 (609)
T KOG4227|consen 284 D-HNPNGYCNIKTIKSMTFIDDY-TVATGSDHWGIHIWKLPRANDSYGFTQIGHDEEEMPSEIFIEKELTVLRGHRSVPN 361 (609)
T ss_pred c-CCCCcceeeeeeeeeeeecce-eeeccCcccceEEEecCCCccccCccccCcchhhCchhheecceeEEEeccccccc
Confidence 3 22 246677886554 489999999999998742 11 1223344433 56
Q ss_pred EEEECCCCCEEEEEECCCeEEEE
Q 010759 476 EVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 476 ~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
-+.|+|-...|++.+....+.+|
T Consensus 362 QVRF~~H~~~l~SSGVE~~~KlW 384 (609)
T KOG4227|consen 362 QVRFSQHNNLLVSSGVENSFKLW 384 (609)
T ss_pred ceeecCCcceEeccchhhheecc
Confidence 79999999999998888889988
No 220
>KOG2111 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=99.65 E-value=1.4e-12 Score=115.97 Aligned_cols=234 Identities=22% Similarity=0.330 Sum_probs=158.7
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCcee-EeecCCCCCEEEEEecCCCCEEE-EecCC------CeEEEEeccCc
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLL-TGSCD------KTAIVWDVKTE 286 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~-sgs~D------~~v~iwd~~~~ 286 (502)
...+++|+.|...++.|..+ -.+||+.+.-.. .....+.+.+.-+...-..++|+ .|+.. ..|.|||=...
T Consensus 7 ~~lsvs~NQD~ScFava~~~-Gfriyn~~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~ 85 (346)
T KOG2111|consen 7 KTLSVSFNQDHSCFAVATDT-GFRIYNCDPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKE 85 (346)
T ss_pred ceeEEEEccCCceEEEEecC-ceEEEecCchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccC
Confidence 35669999998888877665 479998764211 11111222222222222234543 44443 57999995555
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcC-CCcceeeecCCC--cceeEEEEcCCCCEEEE-EeCCCcEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQ--GEVNCVKWDPTGSLLAS-CSDDVTAK 362 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s-gs~dg~i~ 362 (502)
.++.++.+ ..+|.++..+.+...+. ..+.|++|... ..+.+..+..-. ....+++-+....+||. |-.-|.|+
T Consensus 86 ~~i~el~f-~~~I~~V~l~r~riVvv--l~~~I~VytF~~n~k~l~~~et~~NPkGlC~~~~~~~k~~LafPg~k~GqvQ 162 (346)
T KOG2111|consen 86 RCIIELSF-NSEIKAVKLRRDRIVVV--LENKIYVYTFPDNPKLLHVIETRSNPKGLCSLCPTSNKSLLAFPGFKTGQVQ 162 (346)
T ss_pred cEEEEEEe-ccceeeEEEcCCeEEEE--ecCeEEEEEcCCChhheeeeecccCCCceEeecCCCCceEEEcCCCccceEE
Confidence 55555544 34677777766654433 45789999887 444444443222 12444433333334443 44568999
Q ss_pred EEeCCCCce--eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe-EEEEeCCCCeEEEEeeCC--CCCEEEEE
Q 010759 363 IWNMKQDKY--VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST-VKLWDVELGKLLYSLNGH--REPVYSLA 437 (502)
Q Consensus 363 iwd~~~~~~--~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~~h--~~~v~~l~ 437 (502)
|-|+...+. ...+.+|...|.+++.+-+|. ++||+|..|+ |||||..+|.++.+++-- ...|++|+
T Consensus 163 i~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt---------~vATaStkGTLIRIFdt~~g~~l~E~RRG~d~A~iy~ia 233 (346)
T KOG2111|consen 163 IVDLASTKPNAPSIINAHDSDIACVALNLQGT---------LVATASTKGTLIRIFDTEDGTLLQELRRGVDRADIYCIA 233 (346)
T ss_pred EEEhhhcCcCCceEEEcccCceeEEEEcCCcc---------EEEEeccCcEEEEEEEcCCCcEeeeeecCCchheEEEEE
Confidence 999876655 366789999999999999986 8999999998 799999999999998632 35699999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
|||++.+||++|.-|+|+||.++.
T Consensus 234 FSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 234 FSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred eCCCccEEEEEcCCCeEEEEEeec
Confidence 999999999999999999999875
No 221
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=6.2e-14 Score=140.43 Aligned_cols=213 Identities=17% Similarity=0.185 Sum_probs=143.1
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
..|.+||..+.....+..+...+.+.+|+|+|+.|+..+.+ ..|.+||+.+++...
T Consensus 184 ~~l~i~D~~g~~~~~lt~~~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~--------------------- 242 (433)
T PRK04922 184 YALQVADSDGYNPQTILRSAEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQREL--------------------- 242 (433)
T ss_pred EEEEEECCCCCCceEeecCCCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEE---------------------
Confidence 36889998776666677788889999999999998877633 468888876654211
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDV--TAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
+..+.+...+++|+|||+.|+ +.+.+| .|.+||+.++... .+..+........|+
T Consensus 243 ---------------------l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~~~-~lt~~~~~~~~~~~s 300 (433)
T PRK04922 243 ---------------------VASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQLT-RLTNHFGIDTEPTWA 300 (433)
T ss_pred ---------------------eccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCCeE-ECccCCCCccceEEC
Confidence 111122334689999998765 555555 5899999877643 344444455678999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCe--EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEeCCCCe
Q 010759 389 PTGSGTNNPNQQLILASASFDST--VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK---SMHIWSLKEGK 463 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg---~i~iw~~~~~~ 463 (502)
|+|. .++++...+|. |.++|+.+++.. .+..+......++|||||++|+..+.++ .|.+|++.+++
T Consensus 301 pDG~--------~l~f~sd~~g~~~iy~~dl~~g~~~-~lt~~g~~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~ 371 (433)
T PRK04922 301 PDGK--------SIYFTSDRGGRPQIYRVAASGGSAE-RLTFQGNYNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGS 371 (433)
T ss_pred CCCC--------EEEEEECCCCCceEEEEECCCCCeE-EeecCCCCccCEEECCCCCEEEEEECCCCceeEEEEECCCCC
Confidence 9986 23334334554 666777666542 2322333455789999999998765443 69999998877
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECC---CeEEEEEe
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFAN---HTVCVLDF 500 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~---~~v~v~~~ 500 (502)
.. .+........++|+|||++|+..+.+ ..+.++++
T Consensus 372 ~~-~Lt~~~~~~~p~~spdG~~i~~~s~~~g~~~L~~~~~ 410 (433)
T PRK04922 372 VR-TLTPGSLDESPSFAPNGSMVLYATREGGRGVLAAVST 410 (433)
T ss_pred eE-ECCCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 55 33333345578999999988877663 34566554
No 222
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.65 E-value=1.9e-13 Score=136.33 Aligned_cols=216 Identities=14% Similarity=0.186 Sum_probs=140.0
Q ss_pred CCCeEEEEECCCCCEEEEEEC---CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEe-cCCC--eEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDK--TAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~---dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sg-s~D~--~v~iwd~~~~ 286 (502)
...+.+.+|||||+.|+..+. +..+.+|+..+.....+....+.+..++|+|+|+.|+.. +.++ .|.+||+.++
T Consensus 198 ~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg 277 (429)
T PRK03629 198 PQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASG 277 (429)
T ss_pred CCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCeEECCCCCEEEEEEcCCCCcEEEEEECCCC
Confidence 356889999999999886543 357889998765444443344445678999999987754 4344 4777777655
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC-CcEEEE-
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-VTAKIW- 364 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d-g~i~iw- 364 (502)
...+ +..+...+....|+|||+.|+..+.+ +...||
T Consensus 278 ~~~~------------------------------------------lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~ 315 (429)
T PRK03629 278 QIRQ------------------------------------------VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYK 315 (429)
T ss_pred CEEE------------------------------------------ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEE
Confidence 3221 11222345678999999988777654 444555
Q ss_pred -eCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC--CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 365 -NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD--STVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 365 -d~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
++.++.. ..+...........|+|+|. .+++++..+ ..|.+||+.++... .+... .......|+||
T Consensus 316 ~d~~~g~~-~~lt~~~~~~~~~~~SpDG~--------~Ia~~~~~~g~~~I~~~dl~~g~~~-~Lt~~-~~~~~p~~SpD 384 (429)
T PRK03629 316 VNINGGAP-QRITWEGSQNQDADVSSDGK--------FMVMVSSNGGQQHIAKQDLATGGVQ-VLTDT-FLDETPSIAPN 384 (429)
T ss_pred EECCCCCe-EEeecCCCCccCEEECCCCC--------EEEEEEccCCCceEEEEECCCCCeE-EeCCC-CCCCCceECCC
Confidence 6655543 23333344456788999986 233333333 35888999877643 33322 22456789999
Q ss_pred CCEEEEEeCCCc---EEEEeCCCCeeEEEEec-CCCEEEEEECCC
Q 010759 442 GEYLASGSLDKS---MHIWSLKEGKIVKTYTG-NGGIFEVCWNKE 482 (502)
Q Consensus 442 g~~lasgs~Dg~---i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~ 482 (502)
|++|+.++.++. +.++++. |.....+.. .+.+..++|+|-
T Consensus 385 G~~i~~~s~~~~~~~l~~~~~~-G~~~~~l~~~~~~~~~p~Wsp~ 428 (429)
T PRK03629 385 GTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPY 428 (429)
T ss_pred CCEEEEEEcCCCceEEEEEECC-CCCeEECccCCCCcCCcccCCC
Confidence 999999888764 6777774 554555544 556889999983
No 223
>PRK05137 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=2.8e-13 Score=135.86 Aligned_cols=215 Identities=13% Similarity=0.136 Sum_probs=144.2
Q ss_pred CCCeEEEEECCCCCEEEEEEC---CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCCe--EEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKT--AIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~---dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~--v~iwd~~~~ 286 (502)
...+.+.+|+|||+.|+..+. +..|++|++.+.....+..+.+.+...+|+|+|+.|+ +.+.++. |.+||+.++
T Consensus 201 ~~~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~ 280 (435)
T PRK05137 201 SSLVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQRELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSG 280 (435)
T ss_pred CCCeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcEEEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCC
Confidence 457999999999999888764 4689999987766566667777888999999998765 5555554 555566554
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CC--cEEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV--TAKI 363 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg--~i~i 363 (502)
.. ..+..+.+......|+|||+.|+..+. +| .|.+
T Consensus 281 ~~------------------------------------------~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~ 318 (435)
T PRK05137 281 TT------------------------------------------TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYV 318 (435)
T ss_pred ce------------------------------------------EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEE
Confidence 32 122233344556899999998887764 33 5778
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-C--CeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-D--STVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~-d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
||+..+.. ..+......+....|+|+|. .|+..+. . ..|.+||+..+.. ..+. ....+..++|+|
T Consensus 319 ~d~~g~~~-~~lt~~~~~~~~~~~SpdG~---------~ia~~~~~~~~~~i~~~d~~~~~~-~~lt-~~~~~~~p~~sp 386 (435)
T PRK05137 319 MNADGSNP-RRISFGGGRYSTPVWSPRGD---------LIAFTKQGGGQFSIGVMKPDGSGE-RILT-SGFLVEGPTWAP 386 (435)
T ss_pred EECCCCCe-EEeecCCCcccCeEECCCCC---------EEEEEEcCCCceEEEEEECCCCce-Eecc-CCCCCCCCeECC
Confidence 88776543 33333344566788999986 3443332 2 3688888865443 3332 223467889999
Q ss_pred CCCEEEEEeCC------CcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010759 441 TGEYLASGSLD------KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 482 (502)
Q Consensus 441 dg~~lasgs~D------g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 482 (502)
||++|+..+.+ ..|.++++..+.. ..+...+.+...+|+|-
T Consensus 387 DG~~i~~~~~~~~~~~~~~L~~~dl~g~~~-~~l~~~~~~~~p~Wsp~ 433 (435)
T PRK05137 387 NGRVIMFFRQTPGSGGAPKLYTVDLTGRNE-REVPTPGDASDPAWSPL 433 (435)
T ss_pred CCCEEEEEEccCCCCCcceEEEEECCCCce-EEccCCCCccCcccCCC
Confidence 99998765543 2578888866554 44444555778899873
No 224
>PRK03629 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=3.5e-13 Score=134.44 Aligned_cols=212 Identities=13% Similarity=0.161 Sum_probs=140.9
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEec---CCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS---CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs---~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
..|.+||..+.....+..+...+.+.+|+|+|+.|+..+ .+..+.+||+.+++...
T Consensus 179 ~~l~~~d~dg~~~~~lt~~~~~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~--------------------- 237 (429)
T PRK03629 179 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ--------------------- 237 (429)
T ss_pred eeEEEEcCCCCCCEEeecCCCceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEE---------------------
Confidence 378888888766566666778899999999999887653 23467777776654211
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE-eCCC--cEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC-SDDV--TAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg-s~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
+..+.++ +..+.|+|||+.|+.. +.+| .|.+||+.++.... +..+...+....|+
T Consensus 238 ------------------l~~~~~~---~~~~~~SPDG~~La~~~~~~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wS 295 (429)
T PRK03629 238 ------------------VASFPRH---NGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWF 295 (429)
T ss_pred ------------------ccCCCCC---cCCeEECCCCCEEEEEEcCCCCcEEEEEECCCCCEEE-ccCCCCCcCceEEC
Confidence 1112222 3357899999987754 4455 48889998876543 33344567788999
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCe--EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEeCCCCe
Q 010759 389 PTGSGTNNPNQQLILASASFDST--VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGK 463 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~--i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~ 463 (502)
|+|. .++++...++. |.++|+..+.. ..+..+...+...+|||||++|+..+.+ ..|.+|++.++.
T Consensus 296 PDG~--------~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~ 366 (429)
T PRK03629 296 PDSQ--------NLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGG 366 (429)
T ss_pred CCCC--------EEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCCCEEEEEEccCCCceEEEEECCCCC
Confidence 9986 23333333444 44446666543 3344344456678999999999876543 358899998876
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCCe---EEEEE
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFANHT---VCVLD 499 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~---v~v~~ 499 (502)
.. .+.........+|+|||++|++++.++. +.+++
T Consensus 367 ~~-~Lt~~~~~~~p~~SpDG~~i~~~s~~~~~~~l~~~~ 404 (429)
T PRK03629 367 VQ-VLTDTFLDETPSIAPNGTMVIYSSSQGMGSVLNLVS 404 (429)
T ss_pred eE-EeCCCCCCCCceECCCCCEEEEEEcCCCceEEEEEE
Confidence 43 3333223457889999999999988765 44444
No 225
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=7.8e-14 Score=139.20 Aligned_cols=206 Identities=20% Similarity=0.224 Sum_probs=136.5
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
..|.+||..+.....+..+...+.+.+|+|+|+.|+..+.+ ..|.+||+.+++...
T Consensus 176 ~~L~~~D~dG~~~~~l~~~~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~--------------------- 234 (427)
T PRK02889 176 YQLQISDADGQNAQSALSSPEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV--------------------- 234 (427)
T ss_pred cEEEEECCCCCCceEeccCCCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE---------------------
Confidence 46777777776656666788889999999999988876543 358888887664221
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCCcEEEEeC--CCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNM--KQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg~i~iwd~--~~~~~~~~~~~~~~~i~~~~~s 388 (502)
+....+.+.+++|+|||+.|+ +.+.+|...||.+ ..+. ...+..+........|+
T Consensus 235 ---------------------l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wS 292 (427)
T PRK02889 235 ---------------------VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFS 292 (427)
T ss_pred ---------------------eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCCC-cEECCCCCCCCcCeEEc
Confidence 111122345789999998876 5677887777654 4333 34454455556678899
Q ss_pred cCCCCCCCCCCcEEEEEEeCCCeEEEEeC--CCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEeCCCCe
Q 010759 389 PTGSGTNNPNQQLILASASFDSTVKLWDV--ELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK---SMHIWSLKEGK 463 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg~i~iwd~--~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg---~i~iw~~~~~~ 463 (502)
|+|. .++++...+|...||.+ ..+.. ..+..+.......+|||||++|+..+.++ .|.+|++.+++
T Consensus 293 pDG~--------~l~f~s~~~g~~~Iy~~~~~~g~~-~~lt~~g~~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~ 363 (427)
T PRK02889 293 PDGR--------SIYFTSDRGGAPQIYRMPASGGAA-QRVTFTGSYNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQ 363 (427)
T ss_pred CCCC--------EEEEEecCCCCcEEEEEECCCCce-EEEecCCCCcCceEECCCCCEEEEEEccCCcEEEEEEECCCCC
Confidence 9986 23444444566666654 44432 22222223345689999999999777654 69999998877
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCC
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
.... ........++|+|||+.|+.++.++
T Consensus 364 ~~~l-t~~~~~~~p~~spdg~~l~~~~~~~ 392 (427)
T PRK02889 364 VTAL-TDTTRDESPSFAPNGRYILYATQQG 392 (427)
T ss_pred eEEc-cCCCCccCceECCCCCEEEEEEecC
Confidence 5433 3333446789999999999887654
No 226
>PRK04922 tolB translocation protein TolB; Provisional
Probab=99.63 E-value=1.5e-13 Score=137.56 Aligned_cols=214 Identities=17% Similarity=0.214 Sum_probs=140.5
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCC--eEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDK--TAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~--~v~iwd~~~~ 286 (502)
...+.+.+|+|||+.|+..+.. ..|++|+..+.....+..+.+...+++|+|+|+.|+ +.+.++ .|++||+.++
T Consensus 203 ~~~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g 282 (433)
T PRK04922 203 AEPILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRELVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSR 282 (433)
T ss_pred CCccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEEEeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCC
Confidence 3468899999999999987744 469999987655555555555566889999998775 445554 4777777655
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCc--EEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVT--AKI 363 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~--i~i 363 (502)
+.. .+..+......++|+|||+.|+.++. +|. |.+
T Consensus 283 ~~~------------------------------------------~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~ 320 (433)
T PRK04922 283 QLT------------------------------------------RLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYR 320 (433)
T ss_pred CeE------------------------------------------ECccCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 421 12223333456899999998877764 444 666
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
+++.++... .+.........++|+|+|. .|+..+ .++ .|.+||+.+++.. .+. +........|+|
T Consensus 321 ~dl~~g~~~-~lt~~g~~~~~~~~SpDG~---------~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt-~~~~~~~p~~sp 388 (433)
T PRK04922 321 VAASGGSAE-RLTFQGNYNARASVSPDGK---------KIAMVHGSGGQYRIAVMDLSTGSVR-TLT-PGSLDESPSFAP 388 (433)
T ss_pred EECCCCCeE-EeecCCCCccCEEECCCCC---------EEEEEECCCCceeEEEEECCCCCeE-ECC-CCCCCCCceECC
Confidence 676665532 2222333445689999986 343333 222 6999999887654 443 223456679999
Q ss_pred CCCEEEEEeCC---CcEEEEeCCCCeeEEEEe-cCCCEEEEEECC
Q 010759 441 TGEYLASGSLD---KSMHIWSLKEGKIVKTYT-GNGGIFEVCWNK 481 (502)
Q Consensus 441 dg~~lasgs~D---g~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~ 481 (502)
||++|+..+.+ +.|.++++.. .....+. +.+.+..++|+|
T Consensus 389 dG~~i~~~s~~~g~~~L~~~~~~g-~~~~~l~~~~g~~~~p~wsp 432 (433)
T PRK04922 389 NGSMVLYATREGGRGVLAAVSTDG-RVRQRLVSADGEVREPAWSP 432 (433)
T ss_pred CCCEEEEEEecCCceEEEEEECCC-CceEEcccCCCCCCCCccCC
Confidence 99998876653 4588888754 3444443 345677889987
No 227
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.63 E-value=8.3e-14 Score=132.52 Aligned_cols=273 Identities=16% Similarity=0.249 Sum_probs=190.3
Q ss_pred CCCCeEEEEECCCCCEE-EEEECCCcEEEEECCCceeEeecCCCC--CEEEEEecCCCCEEEEecCCCeEEEEeccCcce
Q 010759 212 KSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNGDLKCTLSKHKG--PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l-~sg~~dg~i~iw~~~~~~~~~~~~h~~--~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 288 (502)
++..-+.|..+|||+|+ ++|.+--.|++||+..- ...|..|.. .|.-.-++.+-..++---.|++|-+..-- |.
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL-SLKFERhlDae~V~feiLsDD~SK~v~L~~DR~IefHak~-G~- 126 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL-SLKFERHLDAEVVDFEILSDDYSKSVFLQNDRTIEFHAKY-GR- 126 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccc-eeeeeecccccceeEEEeccchhhheEeecCceeeehhhc-Ce-
Confidence 45567789999999985 46778899999998643 233455543 23333333333333444456666554321 11
Q ss_pred eEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 289 KQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
...+.. ...-.++.+. ...-+..++....|+-+++..++-+..|....+.+++|..++-..+|++|+.+|.|.+||.+
T Consensus 127 hy~~RI-P~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR 205 (703)
T KOG2321|consen 127 HYRTRI-PKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPR 205 (703)
T ss_pred eeeeec-CcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecch
Confidence 000000 0011122222 23445555566678999999998888888778999999999999999999999999999998
Q ss_pred CCceeeeccc------CCC-----cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCEEE
Q 010759 368 QDKYVHDLRE------HSK-----EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYS 435 (502)
Q Consensus 368 ~~~~~~~~~~------~~~-----~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~ 435 (502)
....+..+.. |.+ .|+++.|+-+|- -++.|..+|.|.|||+++.+++..-. +..-+|..
T Consensus 206 ~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL---------~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~ 276 (703)
T KOG2321|consen 206 DKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGL---------HVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKK 276 (703)
T ss_pred hhhhheeeecccccCCCccccccCcceEEEecCCce---------eEEeeccCCcEEEEEcccCCceeecccCCccceee
Confidence 7766554432 222 489999987763 68999999999999999988876543 23468999
Q ss_pred EEECCCC--CEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 436 LAFSPTG--EYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 436 l~~spdg--~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+.|.+.+ ..|+| .....++|||-.+|+....+.....+..+|+-|++-.+.+|-.+.-|.-|
T Consensus 277 l~~~~~~~q~~v~S-~Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~Ane~~~m~~y 340 (703)
T KOG2321|consen 277 LDWQDTDQQNKVVS-MDKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTANESSKMHTY 340 (703)
T ss_pred ecccccCCCceEEe-cchHHhhhcccccCCceeeccccCCcCceeeecCCceEEEecCCCcceeE
Confidence 9998764 33443 23467999999999998888877789999999999999999887766443
No 228
>KOG1310 consensus WD40 repeat protein [General function prediction only]
Probab=99.62 E-value=6.5e-15 Score=139.14 Aligned_cols=215 Identities=23% Similarity=0.366 Sum_probs=158.6
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe-eecccCeEEEecC---CCceEEEEcCCCeEEE
Q 010759 246 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDWR---NNVSFATSSTDNMIYV 321 (502)
Q Consensus 246 ~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~---~~~~~~~~~~d~~i~~ 321 (502)
+...+.+|++-|.+|.|+.+|.+|++||.|-.+.|||.-..+....+ .+|...+.++.|. ++..++++..|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 34567899999999999999999999999999999998876665554 4688888888874 5678889999999999
Q ss_pred EEcCC----------CcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCce-------eeec---ccCCC
Q 010759 322 CKIGE----------NRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY-------VHDL---REHSK 380 (502)
Q Consensus 322 ~~~~~----------~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~-------~~~~---~~~~~ 380 (502)
+++.. ..+...+..|...|..++--|++ +.|.++++||+|+-+|++.... ...+ ...--
T Consensus 122 fdl~~~~~~~~d~~~~~~~~~~~cht~rVKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~li 201 (758)
T KOG1310|consen 122 FDLDSSKEGGMDHGMEETTRCWSCHTDRVKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLI 201 (758)
T ss_pred EecccccccccccCccchhhhhhhhhhhhhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhh
Confidence 99973 23455667889999999999998 6789999999999999986311 1111 11112
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--------Ce----------EEEEe-eCCC-----------
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--------GK----------LLYSL-NGHR----------- 430 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--------~~----------~~~~~-~~h~----------- 430 (502)
...++..+|... ++|+.|+.|-..++||.+. +. ++..+ .+|.
T Consensus 202 elk~ltisp~rp--------~~laVGgsdpfarLYD~Rr~lks~~s~~~~~~~pp~~~~cv~yf~p~hlkn~~gn~~~~~ 273 (758)
T KOG1310|consen 202 ELKCLTISPSRP--------YYLAVGGSDPFARLYDRRRVLKSFRSDGTMNTCPPKDCRCVRYFSPGHLKNSQGNLDRYI 273 (758)
T ss_pred eeeeeeecCCCC--------ceEEecCCCchhhhhhhhhhccCCCCCccccCCCCcccchhheecCccccCcccccccce
Confidence 456777777653 5899999999999999431 11 12221 2232
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 431 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
..++-+.|+|+|.-|...=..-.|++|++..++....+
T Consensus 274 ~~~t~vtfnpNGtElLvs~~gEhVYlfdvn~~~~~~~y 311 (758)
T KOG1310|consen 274 TCCTYVTFNPNGTELLVSWGGEHVYLFDVNEDKSPTPY 311 (758)
T ss_pred eeeEEEEECCCCcEEEEeeCCeEEEEEeecCCCCceee
Confidence 12567899999965544333346999999887765444
No 229
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.61 E-value=5.4e-14 Score=125.88 Aligned_cols=269 Identities=21% Similarity=0.424 Sum_probs=175.9
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc------eeEeecCCC------------CCEEEEEecCCCC--EEEEe
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD------LKCTLSKHK------------GPIFSLKWNKKGD--YLLTG 272 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~------~~~~~~~h~------------~~V~~l~~~~~~~--~l~sg 272 (502)
..-|.++.|...|.+|++|..+|.|-++..+.. ....++.|. ..|..++|.++++ .|+..
T Consensus 25 adiis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLls 104 (433)
T KOG1354|consen 25 ADIISAVEFDHYGERLATGDKGGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLLS 104 (433)
T ss_pred hcceeeEEeecccceEeecCCCCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEEe
Confidence 456889999999999999999999999975422 223455554 3578899998775 57788
Q ss_pred cCCCeEEEEeccCcceeE-Eeee-cccCeEEEecCCCce-EEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcCC
Q 010759 273 SCDKTAIVWDVKTEEWKQ-QFEF-HSGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPT 348 (502)
Q Consensus 273 s~D~~v~iwd~~~~~~~~-~~~~-~~~~~~~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~ 348 (502)
..|++|++|-+....... .+.. ...+...+ ...+ .+....+-.+ ...|.+.+. +|...|+++.++.|
T Consensus 105 tNdktiKlWKi~er~~k~~~~~~~~~~~~~~~---~~lr~p~~~~~~~~v------ea~prRv~aNaHtyhiNSIS~NsD 175 (433)
T KOG1354|consen 105 TNDKTIKLWKIRERGSKKEGYNLPEEGPPGTI---TSLRLPVEGRHDLEV------EASPRRVYANAHTYHINSISVNSD 175 (433)
T ss_pred cCCcceeeeeeeccccccccccccccCCCCcc---ceeeceeecccccee------eeeeeeeccccceeEeeeeeecCc
Confidence 899999999876543221 0000 00000000 0000 0111111111 112334443 68888999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCce---eeeccc-----CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC
Q 010759 349 GSLLASCSDDVTAKIWNMKQDKY---VHDLRE-----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG 420 (502)
Q Consensus 349 ~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~-----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 420 (502)
+..++++ +|=.|.+|.+.--.. +..++. ....|++..|+|.. .++++..+.-|+|++-|++..
T Consensus 176 ~Et~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~--------cn~f~YSSSKGtIrLcDmR~~ 246 (433)
T KOG1354|consen 176 KETFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHH--------CNVFVYSSSKGTIRLCDMRQS 246 (433)
T ss_pred cceEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhH--------ccEEEEecCCCcEEEeechhh
Confidence 9988776 677899998753221 112222 12345666666654 357888888999999999843
Q ss_pred eE------EEEee----------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC-CCCeeEEEEecC------------
Q 010759 421 KL------LYSLN----------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSL-KEGKIVKTYTGN------------ 471 (502)
Q Consensus 421 ~~------~~~~~----------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~-~~~~~~~~~~~~------------ 471 (502)
.+ ++... .--..|.++.|+++|+||++-.. -+|++||+ ...+.+.+++-+
T Consensus 247 aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYE 325 (433)
T KOG1354|consen 247 ALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYE 325 (433)
T ss_pred hhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhh
Confidence 21 12111 11246889999999999997553 57999999 456666666432
Q ss_pred -CCE---EEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 472 -GGI---FEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 472 -~~i---~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
..| +.++|+.++.++++|+.+..++||++
T Consensus 326 nD~IfdKFec~~sg~~~~v~TGsy~n~frvf~~ 358 (433)
T KOG1354|consen 326 NDAIFDKFECSWSGNDSYVMTGSYNNVFRVFNL 358 (433)
T ss_pred ccchhheeEEEEcCCcceEecccccceEEEecC
Confidence 233 57999999999999999999999984
No 230
>PRK02889 tolB translocation protein TolB; Provisional
Probab=99.61 E-value=2.8e-13 Score=135.26 Aligned_cols=215 Identities=20% Similarity=0.282 Sum_probs=139.2
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEecc--Cc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVK--TE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~--~~ 286 (502)
...+.+.+|+|||+.|+..+.+ ..|.+|++.+.....+....+.+....|+|+|+.|+ +.+.++...||.+. ++
T Consensus 195 ~~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~ 274 (427)
T PRK02889 195 PEPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRVVANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS 274 (427)
T ss_pred CCCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 4568899999999999887653 359999987655545554556667899999999876 56777776666432 22
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEe
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWN 365 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd 365 (502)
. +..+..+.+......|+|||+.|+..+. +|...||.
T Consensus 275 ~------------------------------------------~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~ 312 (427)
T PRK02889 275 G------------------------------------------LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYR 312 (427)
T ss_pred C------------------------------------------cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEE
Confidence 1 1122233334456789999998876654 46666775
Q ss_pred C--CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC---eEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 366 M--KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS---TVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 366 ~--~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
+ .++.. ..+...........|+|+|. +|+..+.++ .|.+||+.+++... +... ......+|+|
T Consensus 313 ~~~~~g~~-~~lt~~g~~~~~~~~SpDG~---------~Ia~~s~~~g~~~I~v~d~~~g~~~~-lt~~-~~~~~p~~sp 380 (427)
T PRK02889 313 MPASGGAA-QRVTFTGSYNTSPRISPDGK---------LLAYISRVGGAFKLYVQDLATGQVTA-LTDT-TRDESPSFAP 380 (427)
T ss_pred EECCCCce-EEEecCCCCcCceEECCCCC---------EEEEEEccCCcEEEEEEECCCCCeEE-ccCC-CCccCceECC
Confidence 4 34432 22222223344678999986 455444433 69999998876543 3322 2346789999
Q ss_pred CCCEEEEEeCCC---cEEEEeCCCCeeEEEEec-CCCEEEEEECCC
Q 010759 441 TGEYLASGSLDK---SMHIWSLKEGKIVKTYTG-NGGIFEVCWNKE 482 (502)
Q Consensus 441 dg~~lasgs~Dg---~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~ 482 (502)
||++|+.++.++ .+.+.++ +|.....+.. .+.+...+|+|-
T Consensus 381 dg~~l~~~~~~~g~~~l~~~~~-~g~~~~~l~~~~g~~~~p~wsp~ 425 (427)
T PRK02889 381 NGRYILYATQQGGRSVLAAVSS-DGRIKQRLSVQGGDVREPSWGPF 425 (427)
T ss_pred CCCEEEEEEecCCCEEEEEEEC-CCCceEEeecCCCCCCCCccCCC
Confidence 999998777543 3555555 4555555543 456788899984
No 231
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.60 E-value=1.2e-13 Score=123.83 Aligned_cols=326 Identities=18% Similarity=0.286 Sum_probs=214.2
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..++||...|++...-|-..-+.+.+.|.++|||--.+.... .+..+....++++++.++++...
T Consensus 18 ~~~eG~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~---------------wpsI~~~mP~~~~~~~y~~e~~~ 82 (404)
T KOG1409|consen 18 SKIEGSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQY---------------WPSIYHYMPSPCSAMEYVSESRR 82 (404)
T ss_pred hhhcCchhhhhhheeccCCCCeEEccccceeeeEEecccccc---------------CchhhhhCCCCceEeeeeccceE
Confidence 457899999999999898888999999999999953221110 00111122467999999999999
Q ss_pred EEEEECCCcEEEEECCCc-----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 228 LATGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
|+.|-..|++.-+..... .......|...|..+-|+-...++++.+.|+.+.---.+.+..+..+.....++ +.
T Consensus 83 L~vg~~ngtvtefs~sedfnkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~~~~~t-~~ 161 (404)
T KOG1409|consen 83 LYVGQDNGTVTEFALSEDFNKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNFETPAS-AL 161 (404)
T ss_pred EEEEEecceEEEEEhhhhhhhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEeeccCC-CC
Confidence 999999999988875422 222346799999999999888999999999876544344444333333221111 00
Q ss_pred ecCCCceEEEEcCCCeEEEEEc--CCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-eeecccCC
Q 010759 303 DWRNNVSFATSSTDNMIYVCKI--GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-VHDLREHS 379 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~--~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~~~ 379 (502)
.+.-. ....+...+.+....+ ..-.++..+.+|.+.+.+++|.|....+.+|..|..+.+||+-..+. ...+.+|.
T Consensus 162 ~~d~~-~~fvGd~~gqvt~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~ 240 (404)
T KOG1409|consen 162 QFDAL-YAFVGDHSGQITMLKLEQNGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHN 240 (404)
T ss_pred ceeeE-EEEecccccceEEEEEeecCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccch
Confidence 00000 1122333344444443 34457888999999999999999999999999999999999875543 45677888
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE---E--------------------------eeCC-
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY---S--------------------------LNGH- 429 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~---~--------------------------~~~h- 429 (502)
..|..+...+... .|.+++.||.|.+|++...+... . +.-|
T Consensus 241 ~kV~~l~~~~~t~---------~l~S~~edg~i~~w~mn~~r~etpewl~s~~cQ~c~qpffwn~~~m~~~k~~glr~h~ 311 (404)
T KOG1409|consen 241 DKVQALSYAQHTR---------QLISCGEDGGIVVWNMNVKRVETPEWLDSDSCQKCNQPFFWNFRQMWDRKQLGLRQHH 311 (404)
T ss_pred hhhhhhhhhhhhe---------eeeeccCCCeEEEEeccceeecCccccccchhhhhCchHHHHHHHHHhhhhhhhhhhh
Confidence 8888887766543 68899999999999986533210 0 0001
Q ss_pred ----CCCEEEEEECCCCCEEEEEeCCCcEEEEe--------CCCCeeEEEE-ecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 430 ----REPVYSLAFSPTGEYLASGSLDKSMHIWS--------LKEGKIVKTY-TGNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 430 ----~~~v~~l~~spdg~~lasgs~Dg~i~iw~--------~~~~~~~~~~-~~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
...|...+ +.......+-+..-.+++-+ ... ..+.++ ..+.+|..+.+...-..|++++.|+.|.
T Consensus 312 crkcg~avc~~c-~s~~~~~p~mg~e~~vR~~~~c~~~i~~~~~-t~LA~phei~tgItamhlqetlglLvTsG~~Rvi~ 389 (404)
T KOG1409|consen 312 CRKCGKAVCGKC-SSNRSSYPTMGFEFSVRVCDSCYPTIKDEER-TPLAIPHEIKTGITAMHLQETLGLLVTSGTDRVIK 389 (404)
T ss_pred hhhhhhhcCccc-ccCccccccccceeEEEEecccchhhhcCCC-CccccccccccceeEEEhhhhccceeecCCceEEE
Confidence 01111111 11122222223333344433 322 122332 2356899999998888999999999999
Q ss_pred EEEee
Q 010759 497 VLDFR 501 (502)
Q Consensus 497 v~~~~ 501 (502)
+||+|
T Consensus 390 iwd~~ 394 (404)
T KOG1409|consen 390 IWDVR 394 (404)
T ss_pred EEech
Confidence 99987
No 232
>PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins.
Probab=99.59 E-value=3.3e-13 Score=118.79 Aligned_cols=117 Identities=29% Similarity=0.652 Sum_probs=91.4
Q ss_pred CCcceeEEEEcCCCCEEEEE--eCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---CC
Q 010759 336 HQGEVNCVKWDPTGSLLASC--SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF---DS 410 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sg--s~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---dg 410 (502)
..++|.+++|+|+|+.||.. ..++.|.+||++ .+.+..+. ...+..+.|+|+|. +|+.|+. .|
T Consensus 58 ~~~~I~~~~WsP~g~~favi~g~~~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~---------~l~~~g~~n~~G 125 (194)
T PF08662_consen 58 KEGPIHDVAWSPNGNEFAVIYGSMPAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGR---------FLVLAGFGNLNG 125 (194)
T ss_pred CCCceEEEEECcCCCEEEEEEccCCcccEEEcCc-ccEeEeec--CCCceEEEECCCCC---------EEEEEEccCCCc
Confidence 34579999999999986554 467799999997 55555553 46778999999997 5666653 46
Q ss_pred eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeC------CCcEEEEeCCCCeeEEE
Q 010759 411 TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL------DKSMHIWSLKEGKIVKT 467 (502)
Q Consensus 411 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~------Dg~i~iw~~~~~~~~~~ 467 (502)
.|.+||+++.+.+.... |. .++.++|||||++|++++. |..++||+.. |+++..
T Consensus 126 ~l~~wd~~~~~~i~~~~-~~-~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~ 185 (194)
T PF08662_consen 126 DLEFWDVRKKKKISTFE-HS-DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYK 185 (194)
T ss_pred EEEEEECCCCEEeeccc-cC-cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEe
Confidence 79999999888887765 33 4789999999999998864 7889999985 666544
No 233
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.58 E-value=2.8e-12 Score=120.76 Aligned_cols=313 Identities=16% Similarity=0.257 Sum_probs=204.9
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
-.-++..++|||.|++|++...-+ |.+|.-.... .+..+ ....|..+.|||.++||.+-+
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~~~-V~~~~g~~~~-------------~l~~~------~~~~V~~~~fSP~~kYL~tw~ 90 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHAAG-VECWGGPSKA-------------KLVRF------RHPDVKYLDFSPNEKYLVTWS 90 (561)
T ss_pred cCcchhheeecCcchheehhhccc-eEEccccchh-------------heeee------ecCCceecccCcccceeeeec
Confidence 344688899999999999876544 7788643321 11111 134699999999999999876
Q ss_pred CCC---------------cEEEEECCC-ceeEeecCCCCC--EE-EEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 233 YDG---------------QARIWSTNG-DLKCTLSKHKGP--IF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 233 ~dg---------------~i~iw~~~~-~~~~~~~~h~~~--V~-~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
..+ .+.+||..+ .++..+..-..+ .+ -+.|+-+..|++-- -...+.|+++ +..... ..
T Consensus 91 ~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARv-v~~sl~i~e~-t~n~~~-~p 167 (561)
T COG5354 91 REPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARV-VGSSLYIHEI-TDNIEE-HP 167 (561)
T ss_pred cCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhh-ccCeEEEEec-CCcccc-Cc
Confidence 544 489999765 455566555555 55 67898888776544 2347899986 433211 11
Q ss_pred ec---ccCeEEEecCCC---ceEEE-----EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-----
Q 010759 294 FH---SGPTLDVDWRNN---VSFAT-----SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD----- 357 (502)
Q Consensus 294 ~~---~~~~~~~~~~~~---~~~~~-----~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~----- 357 (502)
.+ ...+.+..+.+. ..++. .+...++++|.+..+.++.+-.-....-..+.|++.|+++..--.
T Consensus 168 ~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~ll~l~~t~~ks 247 (561)
T COG5354 168 FKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKYLLVLVMTHTKS 247 (561)
T ss_pred hhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCceEEEEEEEeeec
Confidence 11 122333333322 12222 245678889988876665443222233346888888887543211
Q ss_pred ------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010759 358 ------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 358 ------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 431 (502)
...+.|+++....+.... ...++|..++|.|.+. +..+++|-.+..+.++|++.. .++.+. ..
T Consensus 248 nKsyfgesnLyl~~~~e~~i~V~~-~~~~pVhdf~W~p~S~-------~F~vi~g~~pa~~s~~~lr~N-l~~~~P--e~ 316 (561)
T COG5354 248 NKSYFGESNLYLLRITERSIPVEK-DLKDPVHDFTWEPLSS-------RFAVISGYMPASVSVFDLRGN-LRFYFP--EQ 316 (561)
T ss_pred ccceeccceEEEEeecccccceec-cccccceeeeecccCC-------ceeEEecccccceeecccccc-eEEecC--Cc
Confidence 235677777644333322 4578999999999886 356777889999999999854 554443 33
Q ss_pred CEEEEEECCCCCEEEEEeCC---CcEEEEeCCCCeeEE-EEecCCCEEEEEECCCCCEEEEEEC------CCeEEEEEe
Q 010759 432 PVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGKIVK-TYTGNGGIFEVCWNKEGDKIAACFA------NHTVCVLDF 500 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~~~~-~~~~~~~i~~~~ws~~g~~la~~~~------~~~v~v~~~ 500 (502)
.=+.+.|||.++|++.++.| |.|.+|+.....++. .+.+. ...-+.|+|||.++-+... |..|.|||+
T Consensus 317 ~rNT~~fsp~~r~il~agF~nl~gni~i~~~~~rf~~~~~~~~~-n~s~~~wspd~qF~~~~~ts~k~~~Dn~i~l~~v 394 (561)
T COG5354 317 KRNTIFFSPHERYILFAGFDNLQGNIEIFDPAGRFKVAGAFNGL-NTSYCDWSPDGQFYDTDTTSEKLRVDNSIKLWDV 394 (561)
T ss_pred ccccccccCcccEEEEecCCccccceEEeccCCceEEEEEeecC-CceEeeccCCceEEEecCCCcccccCcceEEEEe
Confidence 45778999999999998887 689999988766554 44432 3345679999998877643 456888886
No 234
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.58 E-value=1.9e-11 Score=116.69 Aligned_cols=310 Identities=15% Similarity=0.290 Sum_probs=196.9
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE----
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG---- 231 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg---- 231 (502)
+++..++|++|+++|-+ .+..++|++..... .+++.. ...+.++.|||-|.+|.+-
T Consensus 36 ~~~v~~~S~~G~lfA~~-~~~~v~i~~~~~~~----------~~lt~~---------~~~~~~L~fSP~g~yL~T~e~~~ 95 (566)
T KOG2315|consen 36 PCNVFAYSNNGRLFAYS-DNQVVKVFEIATLK----------VVLCVE---------LKKTYDLLFSPKGNYLLTWEPWA 95 (566)
T ss_pred cceeEEEcCCCcEEEEE-cCCeEEEEEccCCc----------EEEEec---------cceeeeeeecccccccccccccc
Confidence 36788899999988766 46789999876542 111111 1258899999999998753
Q ss_pred -EC-----CCcEEEEECCCceeE-eecC-CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 232 -SY-----DGQARIWSTNGDLKC-TLSK-HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 232 -~~-----dg~i~iw~~~~~~~~-~~~~-h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
.. .-.+++|++...+.. .+.. .... |++.|+.+..+.+ =-..+.+.+|++....... -..|...+..+.
T Consensus 96 i~~~~~~~~pn~~v~~vet~~~~s~~q~k~Q~~-W~~qfs~dEsl~a-rlv~nev~f~~~~~f~~~~-~kl~~~~i~~f~ 172 (566)
T KOG2315|consen 96 IYGPKNASNPNVLVYNVETGVQRSQIQKKMQNG-WVPQFSIDESLAA-RLVSNEVQFYDLGSFKTIQ-HKLSVSGITMLS 172 (566)
T ss_pred cccCCCCCCCceeeeeeccceehhheehhhhcC-cccccccchhhhh-hhhcceEEEEecCCcccee-eeeeccceeeEE
Confidence 11 235679987653222 2222 2222 7889998875432 1223579999886633211 122333344433
Q ss_pred cCCC--ceEEE------EcCCCeEEEEEcCCCcceeeecC---CCcceeEEEEcCCCCE-E--EEEeCCC---------c
Q 010759 304 WRNN--VSFAT------SSTDNMIYVCKIGENRPIKTFAG---HQGEVNCVKWDPTGSL-L--ASCSDDV---------T 360 (502)
Q Consensus 304 ~~~~--~~~~~------~~~d~~i~~~~~~~~~~~~~~~~---h~~~v~~v~~~p~~~~-l--~sgs~dg---------~ 360 (502)
+... ..+++ .+.-..+++|.+....+-..+.. ....=..+.|++-|+- | ++..-|. +
T Consensus 173 lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFFkadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~ 252 (566)
T KOG2315|consen 173 LSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFFKADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQT 252 (566)
T ss_pred ecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhccccccceeEEEeccCCceEEEEEEEeecCCCccccccce
Confidence 3222 22211 24445788887763222111110 1122235677776652 2 2222232 5
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
+++.++....++..+. ..++|+++.|+|.+. +..++.|-.-..+.|||++ +.+++.+. .++-+++-|+|
T Consensus 253 Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~-------EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp 321 (566)
T KOG2315|consen 253 LYLLATQGESVSVPLL-KEGPVHDVTWSPSGR-------EFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNP 321 (566)
T ss_pred EEEEEecCceEEEecC-CCCCceEEEECCCCC-------EEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECC
Confidence 7777776445444443 368999999999986 3467778888999999987 77777764 46789999999
Q ss_pred CCCEEEEEeCC---CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC------CCeEEEEEe
Q 010759 441 TGEYLASGSLD---KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA------NHTVCVLDF 500 (502)
Q Consensus 441 dg~~lasgs~D---g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~------~~~v~v~~~ 500 (502)
.|++|+.+|.+ |.|-|||+.+.+++..+.... .+-+.|+|||.++.+|.. |..+.||+.
T Consensus 322 ~g~ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~-tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy 389 (566)
T KOG2315|consen 322 HGNIILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN-TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY 389 (566)
T ss_pred CCCEEEEeecCCCCCceEEEeccchhhccccccCC-ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe
Confidence 99999998876 789999999988887765433 356789999999998854 456788875
No 235
>KOG1354 consensus Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.57 E-value=4.6e-13 Score=120.01 Aligned_cols=314 Identities=17% Similarity=0.309 Sum_probs=193.1
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccc--------cCCCCeEEEEECCCC-
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN--------EKSKDVTTLDWNGEG- 225 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~V~~l~~s~~~- 225 (502)
.-|.++.|...|.+||||..+|.|-++.-..... +-..+. ..+..|.. .....|..+.|.+++
T Consensus 26 diis~vef~~~Ge~LatGdkgGRVv~f~r~~~~~------~ey~~~--t~fqshepEFDYLkSleieEKinkIrw~~~~n 97 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDKGGRVVLFEREKLYK------GEYNFQ--TEFQSHEPEFDYLKSLEIEEKINKIRWLDDGN 97 (433)
T ss_pred cceeeEEeecccceEeecCCCCeEEEeecccccc------cceeee--eeeeccCcccchhhhhhhhhhhhhceecCCCC
Confidence 4588999999999999999999999996443211 001111 11111111 112457888898865
Q ss_pred -CEEEEEECCCcEEEEECCCc---e------------------eEe----------------ecCCCCCEEEEEecCCCC
Q 010759 226 -TLLATGSYDGQARIWSTNGD---L------------------KCT----------------LSKHKGPIFSLKWNKKGD 267 (502)
Q Consensus 226 -~~l~sg~~dg~i~iw~~~~~---~------------------~~~----------------~~~h~~~V~~l~~~~~~~ 267 (502)
..++..+.|.+|++|.+... . ... -..|+--|.++.++.+..
T Consensus 98 ~a~FLlstNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~E 177 (433)
T KOG1354|consen 98 LAEFLLSTNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKE 177 (433)
T ss_pred ccEEEEecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccc
Confidence 46777889999999974210 0 000 135777889999999998
Q ss_pred EEEEecCCCeEEEEeccCcc-eeEEeeec-------ccCeEEEecCC--CceEEEEcCCCeEEEEEcCCCcce----eee
Q 010759 268 YLLTGSCDKTAIVWDVKTEE-WKQQFEFH-------SGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPI----KTF 333 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~-~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~----~~~ 333 (502)
.++++ .|=.|.+|++.--. .-...... ...+.+..|++ ...|+-++..|+|+++|++..... +.|
T Consensus 178 t~lSA-DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGtIrLcDmR~~aLCd~hsKlf 256 (433)
T KOG1354|consen 178 TFLSA-DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGTIRLCDMRQSALCDAHSKLF 256 (433)
T ss_pred eEeec-cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCcEEEeechhhhhhcchhhhh
Confidence 88887 47889999875321 11111110 11233444543 456888999999999999853221 111
Q ss_pred ------------cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCceeeecccCC------------CcE---EEE
Q 010759 334 ------------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK-QDKYVHDLREHS------------KEI---YTI 385 (502)
Q Consensus 334 ------------~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~------------~~i---~~~ 385 (502)
.+--..|..+.|+++|+++++=.. -+|++||+. ..+++.++..|. ..| ..+
T Consensus 257 Eepedp~~rsffseiIsSISDvKFs~sGryilsRDy-ltvk~wD~nme~~pv~t~~vh~~lr~kLc~lYEnD~IfdKFec 335 (433)
T KOG1354|consen 257 EEPEDPSSRSFFSEIISSISDVKFSHSGRYILSRDY-LTVKLWDLNMEAKPVETYPVHEYLRSKLCSLYENDAIFDKFEC 335 (433)
T ss_pred ccccCCcchhhHHHHhhhhhceEEccCCcEEEEecc-ceeEEEeccccCCcceEEeehHhHHHHHHHHhhccchhheeEE
Confidence 112246788999999999986543 589999984 445555554442 112 446
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeCCCCC--EEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNGHREP--VYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~h~~~--v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
+|+-++. +++|||..+..+++++..|.. -.++.+...+ ...+ ..-+.+.+++......+|
T Consensus 336 ~~sg~~~---------~v~TGsy~n~frvf~~~~gsk~d~tl~asr~~~~~~~~---~k~~~V~~~g~r~~~~~~----- 398 (433)
T KOG1354|consen 336 SWSGNDS---------YVMTGSYNNVFRVFNLARGSKEDFTLEASRKNMKPRKV---LKLRLVSSSGKRKRDEIS----- 398 (433)
T ss_pred EEcCCcc---------eEecccccceEEEecCCCCcceeecccccccCCccccc---ccceeeecCCCccccccc-----
Confidence 7776664 789999999999999766543 2333332222 1111 011234444444332222
Q ss_pred eeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 463 KIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 463 ~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+..+.-...++..+|+|..+.+|.+..|. +++|
T Consensus 399 --vd~ldf~kkilh~aWhp~en~ia~aatnn-lyif 431 (433)
T KOG1354|consen 399 --VDALDFRKKILHTAWHPKENSIAVAATNN-LYIF 431 (433)
T ss_pred --cchhhhhhHHHhhccCCccceeeeeecCc-eEEe
Confidence 22233344578899999999999888764 5554
No 236
>KOG4497 consensus Uncharacterized conserved protein WDR8, contains WD repeats [General function prediction only]
Probab=99.55 E-value=8.8e-13 Score=117.52 Aligned_cols=271 Identities=17% Similarity=0.230 Sum_probs=181.7
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeecc
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
-..|||+|+++++.+.- .+.|-|.+.-....+..--..|.-+.|..+.-++ ...+.|+.|.+|++...++...+....
T Consensus 13 ~c~fSp~g~yiAs~~~y-rlviRd~~tlq~~qlf~cldki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ckIdeg~ 91 (447)
T KOG4497|consen 13 FCSFSPCGNYIASLSRY-RLVIRDSETLQLHQLFLCLDKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCKIDEGQ 91 (447)
T ss_pred ceeECCCCCeeeeeeee-EEEEeccchhhHHHHHHHHHHhhheeeeccceeeeeeeeccceEEEEEeecceeEEEeccCC
Confidence 46799999999998865 5556666543222111113456678888877654 566778899999999999999998888
Q ss_pred cCeEEEecCCCc--eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc---EEEEeCCCCce
Q 010759 297 GPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT---AKIWNMKQDKY 371 (502)
Q Consensus 297 ~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~---i~iwd~~~~~~ 371 (502)
.+...+.|.++. .+.++.-+-.|.+|.+.+.+.... .--...+..++|+|||++.+.++.-.. +.|..-+....
T Consensus 92 agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~~~-~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~W~l 170 (447)
T KOG4497|consen 92 AGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGYLL-PHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKAWIL 170 (447)
T ss_pred CcceeeeECCCcceEeeeecceeEEEEEEeccceeEEe-cccccCceeEEECCCCceeeeeecccHHHHHHHHhhHHHHH
Confidence 888899997665 345677889999999987654322 112234577888888888777654211 11110001111
Q ss_pred eeecccCC--------------------------------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 372 VHDLREHS--------------------------------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 372 ~~~~~~~~--------------------------------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
+..+.... -.+..+.|+|.+. +|+.|+.|+.+|+.+--+
T Consensus 171 l~~f~~dT~DltgieWsPdg~~laVwd~~Leykv~aYe~~lG~k~v~wsP~~q---------flavGsyD~~lrvlnh~t 241 (447)
T KOG4497|consen 171 LKEFKLDTIDLTGIEWSPDGNWLAVWDNVLEYKVYAYERGLGLKFVEWSPCNQ---------FLAVGSYDQMLRVLNHFT 241 (447)
T ss_pred HHhcCCCcccccCceECCCCcEEEEecchhhheeeeeeeccceeEEEeccccc---------eEEeeccchhhhhhceee
Confidence 11121122 2345556666554 789999999999865321
Q ss_pred CeE------------------------------------------------------------EEEeeC------CCCCE
Q 010759 420 GKL------------------------------------------------------------LYSLNG------HREPV 433 (502)
Q Consensus 420 ~~~------------------------------------------------------------~~~~~~------h~~~v 433 (502)
.+. +..++. -.-.+
T Consensus 242 Wk~f~eflhl~s~~dp~~~~~~ke~~~~~ql~~~cLsf~p~~~~a~~~~~se~~YE~~~~pv~~~~lkp~tD~pnPk~g~ 321 (447)
T KOG4497|consen 242 WKPFGEFLHLCSYHDPTLHLLEKETFSIVQLLHHCLSFTPTDLEAHIWEESETIYEQQMTPVKVHKLKPPTDFPNPKCGA 321 (447)
T ss_pred eeehhhhccchhccCchhhhhhhhhcchhhhcccccccCCCccccCccccchhhhhhhhcceeeecccCCCCCCCccccc
Confidence 110 000110 01235
Q ss_pred EEEEECCCCCEEEEEeC--CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 434 YSLAFSPTGEYLASGSL--DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 434 ~~l~~spdg~~lasgs~--Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
--++||+|..|+||-.+ -..+-+||+..-++-..+.....|....|+|.--+|+.|.....+++|-
T Consensus 322 g~lafs~Ds~y~aTrnd~~PnalW~Wdlq~l~l~avLiQk~piraf~WdP~~prL~vctg~srLY~W~ 389 (447)
T KOG4497|consen 322 GKLAFSCDSTYAATRNDKYPNALWLWDLQNLKLHAVLIQKHPIRAFEWDPGRPRLVVCTGKSRLYFWA 389 (447)
T ss_pred ceeeecCCceEEeeecCCCCceEEEEechhhhhhhhhhhccceeEEEeCCCCceEEEEcCCceEEEEc
Confidence 66899999999998654 4689999999888777777778899999999999999998888888874
No 237
>KOG2321 consensus WD40 repeat protein [General function prediction only]
Probab=99.54 E-value=2.5e-12 Score=122.57 Aligned_cols=280 Identities=16% Similarity=0.204 Sum_probs=197.2
Q ss_pred cccceeEEEECCCCCE-EEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 153 HTSEVCACAWSPAGSL-LASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 153 H~~~V~~~~~spd~~~-l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
|...-+.|..+|||+| ||||..--.|++||+..- .++. ..+. .+..|...-.+.|-..++.-
T Consensus 50 ~p~ast~ik~s~DGqY~lAtG~YKP~ikvydlanL--------------SLKF-ERhl--Dae~V~feiLsDD~SK~v~L 112 (703)
T KOG2321|consen 50 MPTASTRIKVSPDGQYLLATGTYKPQIKVYDLANL--------------SLKF-ERHL--DAEVVDFEILSDDYSKSVFL 112 (703)
T ss_pred CccccceeEecCCCcEEEEecccCCceEEEEcccc--------------eeee-eecc--cccceeEEEeccchhhheEe
Confidence 5666788999999997 566778889999998642 1221 1221 13445555566666666666
Q ss_pred ECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc-eE
Q 010759 232 SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SF 310 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 310 (502)
-.|++|-+....|... .+. -...-..++++.-.--|+.++....|+-+++..|.++..|....+.+..+....-. .+
T Consensus 113 ~~DR~IefHak~G~hy-~~R-IP~~GRDm~y~~~scDly~~gsg~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLl 190 (703)
T KOG2321|consen 113 QNDRTIEFHAKYGRHY-RTR-IPKFGRDMKYHKPSCDLYLVGSGSEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLL 190 (703)
T ss_pred ecCceeeehhhcCeee-eee-cCcCCccccccCCCccEEEeecCcceEEEEccccccccccccccccceeeeecCccceE
Confidence 6777777665443211 111 11222456666444445555566678889999999999999888888888876544 45
Q ss_pred EEEcCCCeEEEEEcCCCcceeeec------CCCc-----ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec-ccC
Q 010759 311 ATSSTDNMIYVCKIGENRPIKTFA------GHQG-----EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL-REH 378 (502)
Q Consensus 311 ~~~~~d~~i~~~~~~~~~~~~~~~------~h~~-----~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~~ 378 (502)
++++.+|.|-.||.+....+..+. .|.+ .|+++.|+.+|-.+++|+.+|.+.|||++..+++..- +..
T Consensus 191 a~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~ 270 (703)
T KOG2321|consen 191 ACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGY 270 (703)
T ss_pred EecccCceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEEEEcccCCceeecccCC
Confidence 566669999999988765544432 2323 4999999999999999999999999999988876432 233
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.-+|..+.|.+.+. +..++|.. ...++|||-.+|+....+... ..++.+++-|++-++.+|-.++.+..|=
T Consensus 271 e~pi~~l~~~~~~~-------q~~v~S~D-k~~~kiWd~~~Gk~~asiEpt-~~lND~C~~p~sGm~f~Ane~~~m~~yy 341 (703)
T KOG2321|consen 271 ELPIKKLDWQDTDQ-------QNKVVSMD-KRILKIWDECTGKPMASIEPT-SDLNDFCFVPGSGMFFTANESSKMHTYY 341 (703)
T ss_pred ccceeeecccccCC-------CceEEecc-hHHhhhcccccCCceeecccc-CCcCceeeecCCceEEEecCCCcceeEE
Confidence 45788899977632 23566543 467999999999998887744 4599999999999999999888877775
Q ss_pred CC
Q 010759 459 LK 460 (502)
Q Consensus 459 ~~ 460 (502)
+.
T Consensus 342 iP 343 (703)
T KOG2321|consen 342 IP 343 (703)
T ss_pred cc
Confidence 54
No 238
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.54 E-value=4.8e-13 Score=135.93 Aligned_cols=193 Identities=19% Similarity=0.306 Sum_probs=151.8
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC-----eEEEecCCCceEEEEcCCCeEEEEEcCCCccee
Q 010759 257 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-----TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK 331 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 331 (502)
|....+.-....++.+..+..+.+||...+............ +....-.....+++++.-+.|.+|+.....+-.
T Consensus 90 i~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~dn~p~ 169 (967)
T KOG0974|consen 90 IFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHEDNKPI 169 (967)
T ss_pred ccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccccCCcc
Confidence 333455556678888999999999998776544433221111 111122345667788888999999987544333
Q ss_pred eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee-ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC
Q 010759 332 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS 410 (502)
Q Consensus 332 ~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg 410 (502)
.+.||.+.|..+.|+.||.++++.|+|.++|+|++.+.+... ...+|...+..+.|.|. .++|++.|.
T Consensus 170 ~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-----------~i~t~gedc 238 (967)
T KOG0974|consen 170 RLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-----------RIITVGEDC 238 (967)
T ss_pred eecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-----------eeEEeccce
Confidence 688999999999999999999999999999999999887765 66689999999999886 489999999
Q ss_pred eEEEEeCCCCeEEEEeeCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 411 TVKLWDVELGKLLYSLNGHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 411 ~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
+.++|+.. +..+.++.+|. ..|..++.++....++|++.|+.+++|++..
T Consensus 239 tcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 239 TCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred EEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 99999765 55556787775 5699999999999999999999999999864
No 239
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.54 E-value=2.7e-12 Score=125.17 Aligned_cols=297 Identities=16% Similarity=0.264 Sum_probs=201.4
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCC--CCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQN--GPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
...+|++|+....++|.||.||.+++-.+.+........+ .+.++. ......+|+..|.-+.|+.+.+.|-+..
T Consensus 15 vkL~c~~WNke~gyIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLs----mNQtLeGH~~sV~vvTWNe~~QKLTtSD 90 (1189)
T KOG2041|consen 15 VKLHCAEWNKESGYIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLS----MNQTLEGHNASVMVVTWNENNQKLTTSD 90 (1189)
T ss_pred ceEEEEEEcccCCeEEeccccceeEEEEccccCCcccccccccccccc----hhhhhccCcceEEEEEeccccccccccC
Confidence 3468999999999999999999999999876544332211 111221 2233456789999999999999999999
Q ss_pred CCCcEEEEECCCce-e--EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 233 YDGQARIWSTNGDL-K--CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 233 ~dg~i~iw~~~~~~-~--~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
.+|.|.+|-+-... . ..-...++-|.+++|+.+|..++....||.|.+=.+...
T Consensus 91 t~GlIiVWmlykgsW~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeDGavIVGsvdGN----------------------- 147 (1189)
T KOG2041|consen 91 TSGLIIVWMLYKGSWCEEMINNRNKSVVVSMSWNLDGTKICIVYEDGAVIVGSVDGN----------------------- 147 (1189)
T ss_pred CCceEEEEeeecccHHHHHhhCcCccEEEEEEEcCCCcEEEEEEccCCEEEEeeccc-----------------------
Confidence 99999999864321 1 122345677899999999999999999998876544322
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-------eeee----cccC
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-------YVHD----LREH 378 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~-------~~~~----~~~~ 378 (502)
++|.- .+.|. ....+.|++|.+.+..+-..|.+.+||....- +... +...
T Consensus 148 ----------RIwgK-------eLkg~--~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~~ 208 (1189)
T KOG2041|consen 148 ----------RIWGK-------ELKGQ--LLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSNF 208 (1189)
T ss_pred ----------eecch-------hcchh--eccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecCC
Confidence 12211 11110 12247899998888888888999999875321 1001 1112
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC-------
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD------- 451 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D------- 451 (502)
...|..+.|.........|+ ...|+.+..+|.+.|-.-.+......+. ..-.|..+.|+++|.+||.+|.|
T Consensus 209 ~~kia~i~w~~g~~~~v~pd-rP~lavcy~nGr~QiMR~eND~~Pvv~d-tgm~~vgakWnh~G~vLAvcG~~~da~~~~ 286 (1189)
T KOG2041|consen 209 PTKIAEIEWNTGPYQPVPPD-RPRLAVCYANGRMQIMRSENDPEPVVVD-TGMKIVGAKWNHNGAVLAVCGNDSDADEPT 286 (1189)
T ss_pred CccccceeeccCccccCCCC-CCEEEEEEcCceehhhhhcCCCCCeEEe-cccEeecceecCCCcEEEEccCcccccCcc
Confidence 23355666654333333333 3467888889988887655433222222 12457889999999999998865
Q ss_pred --CcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 452 --KSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 452 --g~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.|++|.. -|+.+.++...+ .|++++|-..|-++|.+- |+.|.+-++|
T Consensus 287 d~n~v~Fysp-~G~i~gtlkvpg~~It~lsWEg~gLriA~Av-dsfiyfanIR 337 (1189)
T KOG2041|consen 287 DSNKVHFYSP-YGHIVGTLKVPGSCITGLSWEGTGLRIAIAV-DSFIYFANIR 337 (1189)
T ss_pred ccceEEEecc-chhheEEEecCCceeeeeEEcCCceEEEEEe-cceEEEEeec
Confidence 35777764 477888887654 599999999998888775 5678887776
No 240
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.53 E-value=6.9e-12 Score=125.73 Aligned_cols=206 Identities=20% Similarity=0.248 Sum_probs=139.0
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
..|.+++..+.....+..+...+.+.+|+|+|++|+.++.+ ..|++||+.++....
T Consensus 170 ~~l~~~d~~g~~~~~l~~~~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~--------------------- 228 (417)
T TIGR02800 170 YELQVADYDGANPQTITRSREPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREK--------------------- 228 (417)
T ss_pred ceEEEEcCCCCCCEEeecCCCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEE---------------------
Confidence 35777787766556666777789999999999998876543 468888877653211
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDV--TAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
+..+.+.+.+++|+|||+.|+ +.+.++ .|.+|++.++... .+..+........|+
T Consensus 229 ---------------------~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~s 286 (417)
T TIGR02800 229 ---------------------VASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQLT-RLTNGPGIDTEPSWS 286 (417)
T ss_pred ---------------------eecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCEE-ECCCCCCCCCCEEEC
Confidence 111223445688999998765 444444 5888898876543 333344444567888
Q ss_pred cCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC---cEEEEeCCCCe
Q 010759 389 PTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK---SMHIWSLKEGK 463 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg---~i~iw~~~~~~ 463 (502)
|+|. .++++....+ .|.++|+.+++. ..+..+...+..++|+|+|++|+.++.++ .|.+|++.++.
T Consensus 287 ~dg~--------~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~ 357 (417)
T TIGR02800 287 PDGK--------SIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGG 357 (417)
T ss_pred CCCC--------EEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCC
Confidence 8875 2334443333 578888876654 34444555677889999999999888776 79999988765
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCC
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
.. .+.........+|+|+|++|++++.++
T Consensus 358 ~~-~l~~~~~~~~p~~spdg~~l~~~~~~~ 386 (417)
T TIGR02800 358 ER-VLTDTGLDESPSFAPNGRMILYATTRG 386 (417)
T ss_pred eE-EccCCCCCCCceECCCCCEEEEEEeCC
Confidence 43 333223345678999999998887755
No 241
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=99.53 E-value=4.6e-11 Score=115.82 Aligned_cols=284 Identities=13% Similarity=0.120 Sum_probs=171.9
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE-CCCc
Q 010759 158 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS-YDGQ 236 (502)
Q Consensus 158 ~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~-~dg~ 236 (502)
..+.|+|||++++.++.||.|.++|+.+.+.. +.++. ......+++|+||++++++. ..+.
T Consensus 40 ~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v-------------~~i~~-----G~~~~~i~~s~DG~~~~v~n~~~~~ 101 (369)
T PF02239_consen 40 AGLKFSPDGRYLYVANRDGTVSVIDLATGKVV-------------ATIKV-----GGNPRGIAVSPDGKYVYVANYEPGT 101 (369)
T ss_dssp EEEE-TT-SSEEEEEETTSEEEEEETTSSSEE-------------EEEE------SSEEEEEEE--TTTEEEEEEEETTE
T ss_pred eEEEecCCCCEEEEEcCCCeEEEEECCcccEE-------------EEEec-----CCCcceEEEcCCCCEEEEEecCCCc
Confidence 34779999999999999999999999876522 22221 23467899999999998775 6899
Q ss_pred EEEEECCC-ceeEeecC-------CCCCEEEEEecCCCCEEEEecCC-CeEEEEeccCcceeE-EeeecccCeEEEecCC
Q 010759 237 ARIWSTNG-DLKCTLSK-------HKGPIFSLKWNKKGDYLLTGSCD-KTAIVWDVKTEEWKQ-QFEFHSGPTLDVDWRN 306 (502)
Q Consensus 237 i~iw~~~~-~~~~~~~~-------h~~~V~~l~~~~~~~~l~sgs~D-~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~ 306 (502)
+.++|... +....+.. ....+.++..+|....++..-.| +.|.+-|........ ..........+..|..
T Consensus 102 v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~dp 181 (369)
T PF02239_consen 102 VSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFDP 181 (369)
T ss_dssp EEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-T
T ss_pred eeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccCc
Confidence 99999764 33333322 23467788888888866666554 777777866543322 2222223345566654
Q ss_pred Cc-e-EEEEcCCCeEEEEEcCCCcceeeec----CCCcceeEEEEcCC----------CCEEEEEeCCCcEEEEeCCCCc
Q 010759 307 NV-S-FATSSTDNMIYVCKIGENRPIKTFA----GHQGEVNCVKWDPT----------GSLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 307 ~~-~-~~~~~~d~~i~~~~~~~~~~~~~~~----~h~~~v~~v~~~p~----------~~~l~sgs~dg~i~iwd~~~~~ 370 (502)
+. . +++....+.|-+++..+.+.+..+. .|.++...+ .||. +...++.-....+.+||....+
T Consensus 182 dgry~~va~~~sn~i~viD~~~~k~v~~i~~g~~p~~~~~~~~-php~~g~vw~~~~~~~~~~~~ig~~~v~v~d~~~wk 260 (369)
T PF02239_consen 182 DGRYFLVAANGSNKIAVIDTKTGKLVALIDTGKKPHPGPGANF-PHPGFGPVWATSGLGYFAIPLIGTDPVSVHDDYAWK 260 (369)
T ss_dssp TSSEEEEEEGGGTEEEEEETTTTEEEEEEE-SSSBEETTEEEE-EETTTEEEEEEEBSSSSEEEEEE--TTT-STTTBTS
T ss_pred ccceeeecccccceeEEEeeccceEEEEeeccccccccccccc-cCCCcceEEeeccccceecccccCCccccchhhcCe
Confidence 43 3 3455677789999988876654432 233333322 1222 2222222223356678888899
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE---EeCCCeEEEEeCCCCeEEEEeeCCC-CCEEEEEECCCCCEEE
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS---ASFDSTVKLWDVELGKLLYSLNGHR-EPVYSLAFSPTGEYLA 446 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s---gs~dg~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spdg~~la 446 (502)
.+.++...... ..++.+|++. ++.+. +...++|.++|.++.+.+.++.... ..+..+.|+++|+++-
T Consensus 261 vv~~I~~~G~g-lFi~thP~s~--------~vwvd~~~~~~~~~v~viD~~tl~~~~~i~~~~~~~~~h~ef~~dG~~v~ 331 (369)
T PF02239_consen 261 VVKTIPTQGGG-LFIKTHPDSR--------YVWVDTFLNPDADTVQVIDKKTLKVVKTITPGPGKRVVHMEFNPDGKEVW 331 (369)
T ss_dssp EEEEEE-SSSS---EE--TT-S--------EEEEE-TT-SSHT-EEEEECCGTEEEE-HHHHHT--EEEEEE-TTSSEEE
T ss_pred EEEEEECCCCc-ceeecCCCCc--------cEEeeccCCCCCceEEEEECcCcceeEEEeccCCCcEeccEECCCCCEEE
Confidence 99888876666 6777788875 33333 3556899999999998887775322 3589999999998664
Q ss_pred EEe--CCCcEEEEeCCCCeeEEEEe
Q 010759 447 SGS--LDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 447 sgs--~Dg~i~iw~~~~~~~~~~~~ 469 (502)
.+. .++.|.+||..+.++++.++
T Consensus 332 vS~~~~~~~i~v~D~~Tl~~~~~i~ 356 (369)
T PF02239_consen 332 VSVWDGNGAIVVYDAKTLKEKKRIP 356 (369)
T ss_dssp EEEE--TTEEEEEETTTTEEEEEEE
T ss_pred EEEecCCCEEEEEECCCcEEEEEEE
Confidence 443 34479999999999998886
No 242
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.53 E-value=2.8e-12 Score=132.15 Aligned_cols=252 Identities=17% Similarity=0.255 Sum_probs=176.1
Q ss_pred EECCCceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcc-------eeEEeeecccCeEEEec-CCCceE
Q 010759 240 WSTNGDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE-------WKQQFEFHSGPTLDVDW-RNNVSF 310 (502)
Q Consensus 240 w~~~~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~~ 310 (502)
|+..|.++..+..|...|..++.++.. .+|+|||.||+|++||++... ...++......+..+.. .+...|
T Consensus 1034 W~p~G~lVAhL~Ehs~~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~ 1113 (1431)
T KOG1240|consen 1034 WNPRGILVAHLHEHSSAVIKLAVSSEHTSLFVSGSDDGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQF 1113 (1431)
T ss_pred CCccceEeehhhhccccccceeecCCCCceEEEecCCceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeE
Confidence 888888888999999999998887765 899999999999999986432 12233333455666654 456678
Q ss_pred EEEcCCCeEEEEEcCCCcc-------eeeecCC-Ccc-eeEEEEcC-CCC-EEEEEeCCCcEEEEeCCCCceeeecc--c
Q 010759 311 ATSSTDNMIYVCKIGENRP-------IKTFAGH-QGE-VNCVKWDP-TGS-LLASCSDDVTAKIWNMKQDKYVHDLR--E 377 (502)
Q Consensus 311 ~~~~~d~~i~~~~~~~~~~-------~~~~~~h-~~~-v~~v~~~p-~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~--~ 377 (502)
+.++.||.|.+.+++.... .+....+ .+. |..-+|.. .+. .++.+..-+.|..||++.......++ .
T Consensus 1114 Av~t~DG~v~~~~id~~~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~ 1193 (1431)
T KOG1240|consen 1114 AVSTKDGSVRVLRIDHYNVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQL 1193 (1431)
T ss_pred EEEcCCCeEEEEEccccccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCc
Confidence 8889999999999876211 1111111 122 23333322 233 68888889999999998765544333 3
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCEEEEEECCCC---CEEEEEe--CC
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFSPTG---EYLASGS--LD 451 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spdg---~~lasgs--~D 451 (502)
..+.|++++.+|.+. +++.|...|.+.+||++-+.++.... ++..+|+.+..+|-- .+.++++ ..
T Consensus 1194 ~hG~vTSi~idp~~~---------WlviGts~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~ 1264 (1431)
T KOG1240|consen 1194 RHGLVTSIVIDPWCN---------WLVIGTSRGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSN 1264 (1431)
T ss_pred cccceeEEEecCCce---------EEEEecCCceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCC
Confidence 467899999999875 89999999999999999887776543 345788888877653 4555554 46
Q ss_pred CcEEEEeCCCCeeEEEEecC-C-------------------CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 452 KSMHIWSLKEGKIVKTYTGN-G-------------------GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~~-~-------------------~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+.|-+|+..+|..-.++-.. + ....+++...+..+.+|+.|..|+.||.
T Consensus 1265 nevs~wn~~~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltggsd~kIR~wD~ 1333 (1431)
T KOG1240|consen 1265 NEVSTWNMETGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGGSDMKIRKWDP 1333 (1431)
T ss_pred CceeeeecccCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecCCccceeeccC
Confidence 88999999998654443211 1 1122344444568889999999999985
No 243
>TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB. The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear.
Probab=99.50 E-value=1.7e-11 Score=122.92 Aligned_cols=213 Identities=18% Similarity=0.252 Sum_probs=136.6
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCC--eEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDK--TAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~--~v~iwd~~~~ 286 (502)
...+...+|+|+|++|+.+... ..|++|++.+.....+..+.+.+.+++|+|+++.|+ +.+.++ .|.+||+.++
T Consensus 189 ~~~~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~ 268 (417)
T TIGR02800 189 REPILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQREKVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGK 268 (417)
T ss_pred CCceecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEEEeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCC
Confidence 3458888999999999887654 479999987654455555667778899999998775 444444 4666666554
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC-C--cEEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V--TAKI 363 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d-g--~i~i 363 (502)
... .+..+........|+|+|+.|+..+.. + .|.+
T Consensus 269 ~~~------------------------------------------~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~ 306 (417)
T TIGR02800 269 QLT------------------------------------------RLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYM 306 (417)
T ss_pred CEE------------------------------------------ECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEE
Confidence 321 111222233456899999988766543 3 5777
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC---eEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS---TVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg---~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
+++.+++.. .+..+...+..+.|+|++. +|+.++.++ .|.+||+.++... .+... ......+|+|
T Consensus 307 ~d~~~~~~~-~l~~~~~~~~~~~~spdg~---------~i~~~~~~~~~~~i~~~d~~~~~~~-~l~~~-~~~~~p~~sp 374 (417)
T TIGR02800 307 MDADGGEVR-RLTFRGGYNASPSWSPDGD---------LIAFVHREGGGFNIAVMDLDGGGER-VLTDT-GLDESPSFAP 374 (417)
T ss_pred EECCCCCEE-EeecCCCCccCeEECCCCC---------EEEEEEccCCceEEEEEeCCCCCeE-EccCC-CCCCCceECC
Confidence 787766533 3333445667788999886 455555554 7889998875543 23222 2345568999
Q ss_pred CCCEEEEEeCCC---cEEEEeCCCCeeEEEEec-CCCEEEEEEC
Q 010759 441 TGEYLASGSLDK---SMHIWSLKEGKIVKTYTG-NGGIFEVCWN 480 (502)
Q Consensus 441 dg~~lasgs~Dg---~i~iw~~~~~~~~~~~~~-~~~i~~~~ws 480 (502)
+|++|+.++.++ .+.+.+.. |.....+.. .+.+..++|+
T Consensus 375 dg~~l~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~g~~~~~~ws 417 (417)
T TIGR02800 375 NGRMILYATTRGGRGVLGLVSTD-GRFRARLPLGNGDVREPAWS 417 (417)
T ss_pred CCCEEEEEEeCCCcEEEEEEECC-CceeeECCCCCCCcCCCCCC
Confidence 999988776654 45555543 444444432 4456666664
No 244
>KOG2394 consensus WD40 protein DMR-N9 [General function prediction only]
Probab=99.49 E-value=1.4e-12 Score=123.48 Aligned_cols=242 Identities=21% Similarity=0.294 Sum_probs=160.1
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc--e----eEeecCCCCCEEEEEe-----cCCCCEEEEecCCCeEEEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--L----KCTLSKHKGPIFSLKW-----NKKGDYLLTGSCDKTAIVW 281 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~--~----~~~~~~h~~~V~~l~~-----~~~~~~l~sgs~D~~v~iw 281 (502)
+..+....++..|.+|+-.- ...+++|+..+. . ...+..-+++ ++-.| .|.+--++.|-.-|.|.+.
T Consensus 123 sg~~~~~~~~~~gd~lcFnv-g~~lyv~~~~g~~~~~~pi~k~~y~gt~P-~cHdfn~~~a~~~g~dllIGf~tGqvq~i 200 (636)
T KOG2394|consen 123 SGIVTNTNQSGKGDRLCFNV-GRELYVYSYRGAADLSKPIDKREYKGTSP-TCHDFNSFTATPKGLDLLIGFTTGQVQLI 200 (636)
T ss_pred ccceeeccccCCCCEEEEec-CCeEEEEEccCcchhccchhhhcccCCCC-ceecccccccCCCCcceEEeeccCceEEe
Confidence 34566666777777766533 246778876531 1 1111122222 23333 3456678888888899998
Q ss_pred eccCcceeEEee----ecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE
Q 010759 282 DVKTEEWKQQFE----FHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 282 d~~~~~~~~~~~----~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg 355 (502)
|....++...|. .....++++.|. .+..|+.+..++.+++++..... +- .-.+-...+++..++..
T Consensus 201 dp~~~~~sklfne~r~i~ktsvT~ikWvpg~~~~Fl~a~~sGnlyly~~~~~~------~~--t~p~~~~~k~~~~f~i~ 272 (636)
T KOG2394|consen 201 DPINFEVSKLFNEERLINKSSVTCIKWVPGSDSLFLVAHASGNLYLYDKEIVC------GA--TAPSYQALKDGDQFAIL 272 (636)
T ss_pred cchhhHHHHhhhhcccccccceEEEEEEeCCCceEEEEEecCceEEeeccccc------cC--CCCcccccCCCCeeEEe
Confidence 876644333221 233567888885 45678888888888888762111 00 01112223455555433
Q ss_pred eCCCcEEEEeC-CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEE
Q 010759 356 SDDVTAKIWNM-KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVY 434 (502)
Q Consensus 356 s~dg~i~iwd~-~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~ 434 (502)
. |-- .+..++..+..-...|..++|+|+|. +||+.|.||.+||||..+.+++..++..-+...
T Consensus 273 t-------~ksk~~rNPv~~w~~~~g~in~f~FS~DG~---------~LA~VSqDGfLRvF~fdt~eLlg~mkSYFGGLL 336 (636)
T KOG2394|consen 273 T-------SKSKKTRNPVARWHIGEGSINEFAFSPDGK---------YLATVSQDGFLRIFDFDTQELLGVMKSYFGGLL 336 (636)
T ss_pred e-------eeccccCCccceeEeccccccceeEcCCCc---------eEEEEecCceEEEeeccHHHHHHHHHhhccceE
Confidence 2 211 11233444444456889999999997 899999999999999998888777776678899
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEEC
Q 010759 435 SLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWN 480 (502)
Q Consensus 435 ~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws 480 (502)
|++|||||+|||+||.|-.|.||.+..++++..-.++ ..|..|+|.
T Consensus 337 CvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 337 CVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVVAFD 383 (636)
T ss_pred EEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeEeec
Confidence 9999999999999999999999999999998876664 457788877
No 245
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.49 E-value=3.3e-11 Score=114.66 Aligned_cols=314 Identities=16% Similarity=0.301 Sum_probs=186.1
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC---
Q 010759 158 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD--- 234 (502)
Q Consensus 158 ~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d--- 234 (502)
+-+.|||-|+||+|--.-| |.+|-=.+ ... +. .-....|..+.|||..+||+|-+..
T Consensus 214 tyv~wSP~GTYL~t~Hk~G-I~lWGG~~---f~r-------------~~---RF~Hp~Vq~idfSP~EkYLVT~s~~p~~ 273 (698)
T KOG2314|consen 214 TYVRWSPKGTYLVTFHKQG-IALWGGES---FDR-------------IQ---RFYHPGVQFIDFSPNEKYLVTYSPEPII 273 (698)
T ss_pred eeEEecCCceEEEEEeccc-eeeecCcc---HHH-------------HH---hccCCCceeeecCCccceEEEecCCccc
Confidence 5689999999999987655 67894211 100 00 0113469999999999999987652
Q ss_pred --------CcEEEEECC-CceeEeecC--CCCCEEE-EEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 235 --------GQARIWSTN-GDLKCTLSK--HKGPIFS-LKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 235 --------g~i~iw~~~-~~~~~~~~~--h~~~V~~-l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
..++|||+. |.++..|.. ....++. .+||.+++|++.-.. .+|.||+.....+...-...-..+...
T Consensus 274 ~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~F 352 (698)
T KOG2314|consen 274 VEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDF 352 (698)
T ss_pred cCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCc
Confidence 478999975 444555544 2333443 589999999887665 578888865543322211122233444
Q ss_pred ecCCCceEEE---EcCC---CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE----------eCCCcEEEEeC
Q 010759 303 DWRNNVSFAT---SSTD---NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC----------SDDVTAKIWNM 366 (502)
Q Consensus 303 ~~~~~~~~~~---~~~d---~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg----------s~dg~i~iwd~ 366 (502)
.|.+...+++ -..+ ..+.+..+...+.+++-.-|.-.=+.+-|-.+|.+|+.- +.-..+.|+.+
T Consensus 353 swsP~~~llAYwtpe~~~~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gdyLcvkvdR~tK~~~~g~f~n~eIfri 432 (698)
T KOG2314|consen 353 SWSPTSNLLAYWTPETNNIPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGDYLCVKVDRHTKSKVKGQFSNLEIFRI 432 (698)
T ss_pred ccCCCcceEEEEcccccCCcceEEEEecCccceeeeccceeeeccEEEeccCCcEEEEEEEeeccccccceEeeEEEEEe
Confidence 5543322211 1111 123344444444443333232222345565666665432 11223556666
Q ss_pred CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-C---eEEEEeeCCCCCEEEEEECCC
Q 010759 367 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-G---KLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-~---~~~~~~~~h~~~v~~l~~spd 441 (502)
+..............|...+|-|.|. +..+++|- .-.++.+|.+++ . +++..+.. ...+.|.|+|.
T Consensus 433 reKdIpve~velke~vi~FaWEP~gd-------kF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk--~~~N~vfwsPk 503 (698)
T KOG2314|consen 433 REKDIPVEVVELKESVIAFAWEPHGD-------KFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK--KFANTVFWSPK 503 (698)
T ss_pred eccCCCceeeecchheeeeeeccCCC-------eEEEEEccccccceeEEEeecCCCchhhhhhhcc--cccceEEEcCC
Confidence 55443322233456788999999986 23444443 245788888763 2 23333432 45788999999
Q ss_pred CCEEEEE---eCCCcEEEEeCCCCeeEEEE-ecCCCEEEEEECCCCCEEEEEECCCe------EEEEEee
Q 010759 442 GEYLASG---SLDKSMHIWSLKEGKIVKTY-TGNGGIFEVCWNKEGDKIAACFANHT------VCVLDFR 501 (502)
Q Consensus 442 g~~lasg---s~Dg~i~iw~~~~~~~~~~~-~~~~~i~~~~ws~~g~~la~~~~~~~------v~v~~~~ 501 (502)
|+++|.+ |..|.+.++|..-..+..+- ..+...+.+.|.|.|+++++++.-.. -.+|+|+
T Consensus 504 G~fvvva~l~s~~g~l~F~D~~~a~~k~~~~~eh~~at~veWDPtGRYvvT~ss~wrhk~d~GYri~tfq 573 (698)
T KOG2314|consen 504 GRFVVVAALVSRRGDLEFYDTDYADLKDTASPEHFAATEVEWDPTGRYVVTSSSSWRHKVDNGYRIFTFQ 573 (698)
T ss_pred CcEEEEEEecccccceEEEecchhhhhhccCccccccccceECCCCCEEEEeeehhhhccccceEEEEee
Confidence 9998865 56789999998743332222 23456788999999999999986543 3566654
No 246
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.48 E-value=4.1e-11 Score=120.41 Aligned_cols=212 Identities=16% Similarity=0.174 Sum_probs=135.9
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
.|.++|..+.....+..+...+...+|+|+|++|+..+.+ ..|.+||+.+++...
T Consensus 180 ~l~~~d~~g~~~~~l~~~~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~---------------------- 237 (430)
T PRK00178 180 TLQRSDYDGARAVTLLQSREPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQ---------------------- 237 (430)
T ss_pred EEEEECCCCCCceEEecCCCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEE----------------------
Confidence 4677777776556666777889999999999998766543 357777776654221
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCC--cEEEEeCCCCceeeecccCCCcEEEEEEcc
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDV--TAKIWNMKQDKYVHDLREHSKEIYTIRWSP 389 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp 389 (502)
+....+.+....|+|||+.|+ +.+.+| .|.+||+.++... .+..+........|+|
T Consensus 238 --------------------l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~~~~-~lt~~~~~~~~~~~sp 296 (430)
T PRK00178 238 --------------------ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASRQLS-RVTNHPAIDTEPFWGK 296 (430)
T ss_pred --------------------ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCCCeE-EcccCCCCcCCeEECC
Confidence 111112234588999998876 455555 5788898877643 3444444556778999
Q ss_pred CCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC-C--cEEEEeCCCCee
Q 010759 390 TGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-K--SMHIWSLKEGKI 464 (502)
Q Consensus 390 ~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-g--~i~iw~~~~~~~ 464 (502)
+|. .++++...+| .|.++++.+++... +..........+|+|+|++|+..+.+ + .|.+||+.+++.
T Consensus 297 Dg~--------~i~f~s~~~g~~~iy~~d~~~g~~~~-lt~~~~~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~ 367 (430)
T PRK00178 297 DGR--------TLYFTSDRGGKPQIYKVNVNGGRAER-VTFVGNYNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV 367 (430)
T ss_pred CCC--------EEEEEECCCCCceEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCceEEEEEECCCCCE
Confidence 886 2444443443 57777887776432 22112233457899999999876643 3 588899988765
Q ss_pred EEEEecCCCEEEEEECCCCCEEEEEECC-C--eEEEEEe
Q 010759 465 VKTYTGNGGIFEVCWNKEGDKIAACFAN-H--TVCVLDF 500 (502)
Q Consensus 465 ~~~~~~~~~i~~~~ws~~g~~la~~~~~-~--~v~v~~~ 500 (502)
.. +.........+|+|+|+.++..+.. + .+.++++
T Consensus 368 ~~-lt~~~~~~~p~~spdg~~i~~~~~~~g~~~l~~~~~ 405 (430)
T PRK00178 368 RI-LTDTSLDESPSVAPNGTMLIYATRQQGRGVLMLVSI 405 (430)
T ss_pred EE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 33 3322223456899999999887654 2 3444443
No 247
>KOG0974 consensus WD-repeat protein WDR6, WD repeat superfamily [General function prediction only]
Probab=99.47 E-value=7.8e-11 Score=120.17 Aligned_cols=199 Identities=18% Similarity=0.210 Sum_probs=156.7
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..|....+.-+.+.++.+..+..+-||+...+......+..-... .....-+-++++.-++++|+.-
T Consensus 88 ~wi~g~~l~~e~k~i~l~~~~ns~~i~d~~~~~~~~~i~~~er~~-------------l~~~~~~g~s~~~~~i~~gsv~ 154 (967)
T KOG0974|consen 88 DWIFGAKLFEENKKIALVTSRNSLLIRDSKNSSVLSKIQSDERCT-------------LYSSLIIGDSAEELYIASGSVF 154 (967)
T ss_pred ccccccchhhhcceEEEEEcCceEEEEecccCceehhcCCCceEE-------------EEeEEEEeccCcEEEEEecccc
Confidence 345557777788899999999999999987654332222111100 1123334567788899999999
Q ss_pred CcEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE-EeeecccCeEEEecCCCceEEE
Q 010759 235 GQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ-QFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 235 g~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
+.|.+|........ .+.+|.+.++.+.|+-+|.++++.|.|+++|+|++.+.+... ....|...+..+.+.++ .+++
T Consensus 155 ~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n-~i~t 233 (967)
T KOG0974|consen 155 GEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPN-RIIT 233 (967)
T ss_pred ccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccc-eeEE
Confidence 99999997643333 589999999999999999999999999999999999988766 56678888888888777 8999
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCc-ceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~-~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
.+.|-+.++|..... .+..+.+|.+ .|..++.++....++|++.|+.+++|++..
T Consensus 234 ~gedctcrvW~~~~~-~l~~y~~h~g~~iw~~~~~~~~~~~vT~g~Ds~lk~~~l~~ 289 (967)
T KOG0974|consen 234 VGEDCTCRVWGVNGT-QLEVYDEHSGKGIWKIAVPIGVIIKVTGGNDSTLKLWDLNG 289 (967)
T ss_pred eccceEEEEEecccc-eehhhhhhhhcceeEEEEcCCceEEEeeccCcchhhhhhhc
Confidence 999999999966443 3447888865 689999999999999999999999999753
No 248
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.47 E-value=3.1e-11 Score=120.08 Aligned_cols=222 Identities=17% Similarity=0.156 Sum_probs=136.6
Q ss_pred CeEEEEECCCCCE---EEEEECCC--cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecC-CC----eEEEEecc
Q 010759 215 DVTTLDWNGEGTL---LATGSYDG--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK----TAIVWDVK 284 (502)
Q Consensus 215 ~V~~l~~s~~~~~---l~sg~~dg--~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~----~v~iwd~~ 284 (502)
.+.+-+|||||+. +++...+| .|.+.++.+.....+....+.....+|+|+|++|+..+. +| .+.+|++.
T Consensus 186 ~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~~lt~~~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~ 265 (428)
T PRK01029 186 LSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGKKILALQGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLE 265 (428)
T ss_pred CcccceEccCCCceEEEEEEccCCCceEEEEECCCCCceEeecCCCCccceEECCCCCEEEEEECCCCCcceeEEEeecc
Confidence 4566799999974 23444444 466667766555555555566677899999998875542 22 22223332
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKI 363 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~i 363 (502)
++. .+.+.+...++.+.....+|+|||+.|+..+ .+|...|
T Consensus 266 ~g~--------------------------------------~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~l 307 (428)
T PRK01029 266 TGA--------------------------------------IGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRI 307 (428)
T ss_pred cCC--------------------------------------CCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceE
Confidence 210 0111111222223345679999999877665 4676566
Q ss_pred Ee--CCC-CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC--CeEEEEeCCCCeEEEEeeCCCCCEEEEEE
Q 010759 364 WN--MKQ-DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD--STVKLWDVELGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 364 wd--~~~-~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d--g~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 438 (502)
|. +.. +.....+......+....|+|+|. .+++++..+ ..|.+||+.+++.. .+......+....|
T Consensus 308 y~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~--------~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~w 378 (428)
T PRK01029 308 YIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGK--------KIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSW 378 (428)
T ss_pred EEEECcccccceEEeccCCCCccceeECCCCC--------EEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEE
Confidence 64 332 222333444445667889999986 233333332 46999999888764 33333345778999
Q ss_pred CCCCCEEEEEeC---CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCC
Q 010759 439 SPTGEYLASGSL---DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEG 483 (502)
Q Consensus 439 spdg~~lasgs~---Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g 483 (502)
+|||++|+..+. ...|.+|++.+++......+.+.+...+|+|-.
T Consensus 379 SpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~~ 426 (428)
T PRK01029 379 AIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAFP 426 (428)
T ss_pred CCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCCC
Confidence 999998875433 356889999888776666666667889999865
No 249
>PRK01029 tolB translocation protein TolB; Provisional
Probab=99.46 E-value=3.6e-11 Score=119.57 Aligned_cols=216 Identities=16% Similarity=0.192 Sum_probs=130.9
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEE---EEecCCC--eEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL---LTGSCDK--TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l---~sgs~D~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
..|.+.|..+.....+......+.+-+|+|+|+.+ ++...++ .|.+.++.+++..
T Consensus 165 ~~l~~~d~dG~~~~~lt~~~~~~~sP~wSPDG~~~~~~y~S~~~g~~~I~~~~l~~g~~~-------------------- 224 (428)
T PRK01029 165 GELWSVDYDGQNLRPLTQEHSLSITPTWMHIGSGFPYLYVSYKLGVPKIFLGSLENPAGK-------------------- 224 (428)
T ss_pred ceEEEEcCCCCCceEcccCCCCcccceEccCCCceEEEEEEccCCCceEEEEECCCCCce--------------------
Confidence 35666677766555565566667788999999742 2444443 3444455444311
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CC----cEEEEeCCCC---ceeeecccCCCc
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV----TAKIWNMKQD---KYVHDLREHSKE 381 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg----~i~iwd~~~~---~~~~~~~~~~~~ 381 (502)
.+..+ .+.....+|+|||+.|+..+. +| .+.+|++..+ ............
T Consensus 225 -------------------~lt~~---~g~~~~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~ 282 (428)
T PRK01029 225 -------------------KILAL---QGNQLMPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGT 282 (428)
T ss_pred -------------------EeecC---CCCccceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCC
Confidence 11112 222345789999988876553 22 3444776542 222222222233
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE--eCCC-CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---CcEE
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW--DVEL-GKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMH 455 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw--d~~~-~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~ 455 (502)
.....|+|+|. .++.+...+|...|| ++.. +.....+..+...+...+|||||++|+..+.+ ..|.
T Consensus 283 ~~~p~wSPDG~--------~Laf~s~~~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~ 354 (428)
T PRK01029 283 QGNPSFSPDGT--------RLVFVSNKDGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQIC 354 (428)
T ss_pred cCCeEECCCCC--------EEEEEECCCCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEE
Confidence 45679999986 234444456755555 4432 23344455555667889999999999876543 4699
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC---CeEEEEEe
Q 010759 456 IWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN---HTVCVLDF 500 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~---~~v~v~~~ 500 (502)
+|++.+++......+...+..+.|+|||+.|+....+ ..|+++|+
T Consensus 355 v~dl~~g~~~~Lt~~~~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl 402 (428)
T PRK01029 355 VYDLATGRDYQLTTSPENKESPSWAIDSLHLVYSAGNSNESELYLISL 402 (428)
T ss_pred EEECCCCCeEEccCCCCCccceEECCCCCEEEEEECCCCCceEEEEEC
Confidence 9999988765544444456789999999988865442 35666665
No 250
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.46 E-value=1.7e-11 Score=117.85 Aligned_cols=188 Identities=20% Similarity=0.382 Sum_probs=152.0
Q ss_pred cCCCCEEEEecCCCeEEEEeccCcceeEEeeecc---cCeEEEecC---------------------CCceEEEEcCCCe
Q 010759 263 NKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS---GPTLDVDWR---------------------NNVSFATSSTDNM 318 (502)
Q Consensus 263 ~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~---------------------~~~~~~~~~~d~~ 318 (502)
.|...||+....||.+++||..+++..+.|.... +...+..|. +...++.+...|.
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g~ 81 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQGS 81 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCcc
Confidence 3456799999999999999999888777664321 111222221 2234677888899
Q ss_pred EEEEEcCCCcceeeec--CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCC
Q 010759 319 IYVCKIGENRPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNN 396 (502)
Q Consensus 319 i~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~ 396 (502)
|.++++..++....+. +|.+.|+++.++.+-..|.|++.|+.+..|+....+.++.+......+.+++++|+|.
T Consensus 82 v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D~~---- 157 (541)
T KOG4547|consen 82 VLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPDGK---- 157 (541)
T ss_pred EEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCCCC----
Confidence 9999988877665554 6889999999999999999999999999999999999998888888999999999986
Q ss_pred CCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC-----CCEE-EEEeCCCcEEEEeCCC
Q 010759 397 PNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT-----GEYL-ASGSLDKSMHIWSLKE 461 (502)
Q Consensus 397 ~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-----g~~l-asgs~Dg~i~iw~~~~ 461 (502)
+|++|+ +.|++||+.+++.+..|.||.++|++++|--+ |.++ .++..+..|.+|-+..
T Consensus 158 -----~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~~ 221 (541)
T KOG4547|consen 158 -----ILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVEK 221 (541)
T ss_pred -----EEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEEc
Confidence 677776 67999999999999999999999999999876 5554 4566677788887654
No 251
>KOG3881 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.46 E-value=1.5e-11 Score=112.33 Aligned_cols=238 Identities=17% Similarity=0.268 Sum_probs=166.5
Q ss_pred CCEEEEEecCCCC--EEEEecCCCeEEEEeccCcceeEEe------eecccCeEEEecCCCceEEEEcCCCeEEEEEcCC
Q 010759 255 GPIFSLKWNKKGD--YLLTGSCDKTAIVWDVKTEEWKQQF------EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE 326 (502)
Q Consensus 255 ~~V~~l~~~~~~~--~l~sgs~D~~v~iwd~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 326 (502)
..|.+++|..+++ .|+.++.|..+..+.+....+.... .+...++..+.. .+..+++|-.+|.+.+|....
T Consensus 56 ~ris~l~~~~d~~tevl~~r~~~~~~~~~~~~E~~~~s~~~~~~~~~l~~~~I~gl~~-~dg~Litc~~sG~l~~~~~k~ 134 (412)
T KOG3881|consen 56 DRISSLLFGVDGETEVLNARSADDDLPKFVIEEFEISSSLDDAKTVSLGTKSIKGLKL-ADGTLITCVSSGNLQVRHDKS 134 (412)
T ss_pred hhhhhheeecCCceeEeeccccCcccccccccCCccccccccccccccccccccchhh-cCCEEEEEecCCcEEEEeccC
Confidence 3456666655443 4555556767776666555544332 112223322222 345677888889999998873
Q ss_pred C----cceeeecCCCcceeEEEEcCCC-CEEEEEeCC--CcEEEEeCCCCceeeecccCC---------CcEEEEEEccC
Q 010759 327 N----RPIKTFAGHQGEVNCVKWDPTG-SLLASCSDD--VTAKIWNMKQDKYVHDLREHS---------KEIYTIRWSPT 390 (502)
Q Consensus 327 ~----~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~d--g~i~iwd~~~~~~~~~~~~~~---------~~i~~~~~sp~ 390 (502)
+ .+...+..+ ..+..+.-++.. ..+|+|+.. ..+.|||+.+.+.+.+-+... -.++.+.|-|.
T Consensus 135 ~d~hss~l~~la~g-~g~~~~r~~~~~p~Iva~GGke~~n~lkiwdle~~~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g 213 (412)
T KOG3881|consen 135 GDLHSSKLIKLATG-PGLYDVRQTDTDPYIVATGGKENINELKIWDLEQSKQIWSAKNVPNDRLGLRVPVWITDIRFLEG 213 (412)
T ss_pred CccccccceeeecC-CceeeeccCCCCCceEecCchhcccceeeeecccceeeeeccCCCCccccceeeeeeccceecCC
Confidence 2 222333323 334455555544 456679988 889999998876554332211 13456666554
Q ss_pred CCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-E
Q 010759 391 GSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-Y 468 (502)
Q Consensus 391 g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-~ 468 (502)
.. ...||+++.-+.+|+||.+.+ +++..+.--..+|+++..-|+|++|.+|..-|.+..||++.++++.. +
T Consensus 214 ~~-------~~~fat~T~~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~ 286 (412)
T KOG3881|consen 214 SP-------NYKFATITRYHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGL 286 (412)
T ss_pred CC-------CceEEEEecceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeecccc
Confidence 21 246899999999999999876 46777776778999999999999999999999999999999998776 5
Q ss_pred ec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 469 TG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 469 ~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+ .++|.++.-+|.+.+||+|+.|+.|+|+|++
T Consensus 287 kg~tGsirsih~hp~~~~las~GLDRyvRIhD~k 320 (412)
T KOG3881|consen 287 KGITGSIRSIHCHPTHPVLASCGLDRYVRIHDIK 320 (412)
T ss_pred CCccCCcceEEEcCCCceEEeeccceeEEEeecc
Confidence 55 4679999999999999999999999999985
No 252
>KOG2315 consensus Predicted translation initiation factor related to eIF-3a [Translation, ribosomal structure and biogenesis]
Probab=99.44 E-value=2.9e-11 Score=115.39 Aligned_cols=292 Identities=17% Similarity=0.332 Sum_probs=182.8
Q ss_pred ceeEEEECCCCCEEEEE-----eCCC-----cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 156 EVCACAWSPAGSLLASG-----SGDS-----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sg-----s~D~-----~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.++++-|||-|.+|.|= ..++ -+++|++.++...... ......-++..|+.|.
T Consensus 75 ~~~~L~fSP~g~yL~T~e~~~i~~~~~~~~pn~~v~~vet~~~~s~~-----------------q~k~Q~~W~~qfs~dE 137 (566)
T KOG2315|consen 75 KTYDLLFSPKGNYLLTWEPWAIYGPKNASNPNVLVYNVETGVQRSQI-----------------QKKMQNGWVPQFSIDE 137 (566)
T ss_pred eeeeeeecccccccccccccccccCCCCCCCceeeeeeccceehhhe-----------------ehhhhcCcccccccch
Confidence 68899999999998862 1232 3568887763211100 0001112577888886
Q ss_pred CEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCC-C-EEE-----EecCCCeEEEEeccCcceeEEe---eec
Q 010759 226 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG-D-YLL-----TGSCDKTAIVWDVKTEEWKQQF---EFH 295 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~-~-~l~-----sgs~D~~v~iwd~~~~~~~~~~---~~~ 295 (502)
.+.+ --..+.+.+|+..+.....-.-|...|..+.++|.+ . .++ +++.-..|+||-.......+.. .+-
T Consensus 138 sl~a-rlv~nev~f~~~~~f~~~~~kl~~~~i~~f~lSpgp~~~~vAvyvPe~kGaPa~vri~~~~~~~~~~~~a~ksFF 216 (566)
T KOG2315|consen 138 SLAA-RLVSNEVQFYDLGSFKTIQHKLSVSGITMLSLSPGPEPPFVAVYVPEKKGAPASVRIYKYPEEGQHQPVANKSFF 216 (566)
T ss_pred hhhh-hhhcceEEEEecCCccceeeeeeccceeeEEecCCCCCceEEEEccCCCCCCcEEEEeccccccccchhhhcccc
Confidence 5433 233468999998764433334467788889999874 2 333 2566778999976522211111 111
Q ss_pred ccCeEEEecC--CCceEEEE--cCC---------CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEE--EeCCCc
Q 010759 296 SGPTLDVDWR--NNVSFATS--STD---------NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS--CSDDVT 360 (502)
Q Consensus 296 ~~~~~~~~~~--~~~~~~~~--~~d---------~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s--gs~dg~ 360 (502)
...-..+.|. ....++.. .-| .++++..+........+ ...++|.++.|+|+++-|+. |-.-.+
T Consensus 217 kadkvqm~WN~~gt~LLvLastdVDktn~SYYGEq~Lyll~t~g~s~~V~L-~k~GPVhdv~W~~s~~EF~VvyGfMPAk 295 (566)
T KOG2315|consen 217 KADKVQMKWNKLGTALLVLASTDVDKTNASYYGEQTLYLLATQGESVSVPL-LKEGPVHDVTWSPSGREFAVVYGFMPAK 295 (566)
T ss_pred ccceeEEEeccCCceEEEEEEEeecCCCccccccceEEEEEecCceEEEec-CCCCCceEEEECCCCCEEEEEEecccce
Confidence 1122234443 22222222 222 35677766633333222 24789999999999987654 445678
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCeEEEEeeCCCCCEEEEE
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGKLLYSLNGHREPVYSLA 437 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 437 (502)
+.|||++ +.++..+ ..++-.++-|+|.|. +|+.++. -|.|-|||+.+.+++..+..-. -+-..
T Consensus 296 vtifnlr-~~~v~df--~egpRN~~~fnp~g~---------ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~--tt~~e 361 (566)
T KOG2315|consen 296 VTIFNLR-GKPVFDF--PEGPRNTAFFNPHGN---------IILLAGFGNLPGDMEVWDVPNRKLIAKFKAAN--TTVFE 361 (566)
T ss_pred EEEEcCC-CCEeEeC--CCCCccceEECCCCC---------EEEEeecCCCCCceEEEeccchhhccccccCC--ceEEE
Confidence 9999986 4555554 456778899999986 4444444 4789999999988888877543 35579
Q ss_pred ECCCCCEEEEEeC------CCcEEEEeCCCCeeEEEEecCCCEEEEEECC
Q 010759 438 FSPTGEYLASGSL------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNK 481 (502)
Q Consensus 438 ~spdg~~lasgs~------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~ 481 (502)
|+|||+|++|+.. |+.++||+.. |.++....-....+.++|.|
T Consensus 362 W~PdGe~flTATTaPRlrvdNg~Kiwhyt-G~~l~~~~f~sEL~qv~W~P 410 (566)
T KOG2315|consen 362 WSPDGEYFLTATTAPRLRVDNGIKIWHYT-GSLLHEKMFKSELLQVEWRP 410 (566)
T ss_pred EcCCCcEEEEEeccccEEecCCeEEEEec-CceeehhhhhHhHhheeeee
Confidence 9999999998864 6789999975 56555443333577888886
No 253
>PRK00178 tolB translocation protein TolB; Provisional
Probab=99.44 E-value=6e-11 Score=119.18 Aligned_cols=216 Identities=17% Similarity=0.206 Sum_probs=133.5
Q ss_pred CCCeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCC--eEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDK--TAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~--~v~iwd~~~~ 286 (502)
...+....|+|||+.|+..+.+ ..|.+|++.+.....+....+.+....|+|+|+.|+ +.+.++ .|.+||+.++
T Consensus 198 ~~~~~~p~wSpDG~~la~~s~~~~~~~l~~~~l~~g~~~~l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 198 REPILSPRWSPDGKRIAYVSFEQKRPRIFVQNLDTGRREQITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred CCceeeeeECCCCCEEEEEEcCCCCCEEEEEECCCCCEEEccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 3568889999999998876644 368888987655444544455566789999999876 444444 4666676654
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CC--cEEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV--TAKI 363 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg--~i~i 363 (502)
... .+..+........|+|||+.|+..+. +| .|.+
T Consensus 278 ~~~------------------------------------------~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~ 315 (430)
T PRK00178 278 QLS------------------------------------------RVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYK 315 (430)
T ss_pred CeE------------------------------------------EcccCCCCcCCeEECCCCCEEEEEECCCCCceEEE
Confidence 321 11222333445789999998766554 33 4677
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
+++.+++... +...........|+|+|. .++++...++ .|.+||+.+++.. .+. +........|+||
T Consensus 316 ~d~~~g~~~~-lt~~~~~~~~~~~Spdg~--------~i~~~~~~~~~~~l~~~dl~tg~~~-~lt-~~~~~~~p~~spd 384 (430)
T PRK00178 316 VNVNGGRAER-VTFVGNYNARPRLSADGK--------TLVMVHRQDGNFHVAAQDLQRGSVR-ILT-DTSLDESPSVAPN 384 (430)
T ss_pred EECCCCCEEE-eecCCCCccceEECCCCC--------EEEEEEccCCceEEEEEECCCCCEE-Ecc-CCCCCCCceECCC
Confidence 7777665432 221222334568899886 2333333333 5888999877643 232 1222335689999
Q ss_pred CCEEEEEeCC---CcEEEEeCCCCeeEEEEe-cCCCEEEEEECCC
Q 010759 442 GEYLASGSLD---KSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKE 482 (502)
Q Consensus 442 g~~lasgs~D---g~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~ 482 (502)
|++|+..+.+ ..|.++++. |.....+. ..+.+...+|+|-
T Consensus 385 g~~i~~~~~~~g~~~l~~~~~~-g~~~~~l~~~~g~~~~p~ws~~ 428 (430)
T PRK00178 385 GTMLIYATRQQGRGVLMLVSIN-GRVRLPLPTAQGEVREPSWSPY 428 (430)
T ss_pred CCEEEEEEecCCceEEEEEECC-CCceEECcCCCCCcCCCccCCC
Confidence 9998876643 346677775 33333343 3455778889874
No 254
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.43 E-value=8.5e-11 Score=117.83 Aligned_cols=212 Identities=17% Similarity=0.213 Sum_probs=132.0
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC-C--eEEEEeccCcceeEEeeecccCeEEEecCCCceEEE
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-K--TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
.+.++|..+.....+..+...+.+..|+|+|+.|+..+.+ + .|.+||+.+++...
T Consensus 199 ~l~i~d~dG~~~~~l~~~~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~---------------------- 256 (448)
T PRK04792 199 QLMIADYDGYNEQMLLRSPEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREK---------------------- 256 (448)
T ss_pred EEEEEeCCCCCceEeecCCCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEE----------------------
Confidence 5666787766555666677889999999999988765432 2 46777776554211
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEE-EeCCCc--EEEEeCCCCceeeecccCCCcEEEEEEcc
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS-CSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWSP 389 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s-gs~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~sp 389 (502)
+..+. +.....+|+|||+.|+. .+.+|. |.+||+.++... .+..+........|+|
T Consensus 257 -----------------lt~~~---g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~~-~lt~~~~~~~~p~wSp 315 (448)
T PRK04792 257 -----------------VTSFP---GINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKALT-RITRHRAIDTEPSWHP 315 (448)
T ss_pred -----------------ecCCC---CCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCeE-ECccCCCCccceEECC
Confidence 01111 12235789999997764 566665 777788776543 3444444567789999
Q ss_pred CCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeC-CC--cEEEEeCCCCee
Q 010759 390 TGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL-DK--SMHIWSLKEGKI 464 (502)
Q Consensus 390 ~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~-Dg--~i~iw~~~~~~~ 464 (502)
+|. .++++...++ .|.++|+.+++... +..........+|+|||++|+..+. ++ .|.++++.+++.
T Consensus 316 DG~--------~I~f~s~~~g~~~Iy~~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~ 386 (448)
T PRK04792 316 DGK--------SLIFTSERGGKPQIYRVNLASGKVSR-LTFEGEQNLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM 386 (448)
T ss_pred CCC--------EEEEEECCCCCceEEEEECCCCCEEE-EecCCCCCcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe
Confidence 886 2444444444 46666777666432 2212222345799999999887655 34 456678777765
Q ss_pred EEEEecCCCEEEEEECCCCCEEEEEECCC---eEEEEEe
Q 010759 465 VKTYTGNGGIFEVCWNKEGDKIAACFANH---TVCVLDF 500 (502)
Q Consensus 465 ~~~~~~~~~i~~~~ws~~g~~la~~~~~~---~v~v~~~ 500 (502)
.. +.........+|+|+|++|+....++ .+.++++
T Consensus 387 ~~-lt~~~~d~~ps~spdG~~I~~~~~~~g~~~l~~~~~ 424 (448)
T PRK04792 387 QV-LTSTRLDESPSVAPNGTMVIYSTTYQGKQVLAAVSI 424 (448)
T ss_pred EE-ccCCCCCCCceECCCCCEEEEEEecCCceEEEEEEC
Confidence 33 22222233568999999988776543 2455543
No 255
>PRK04792 tolB translocation protein TolB; Provisional
Probab=99.42 E-value=1.6e-10 Score=115.90 Aligned_cols=216 Identities=16% Similarity=0.222 Sum_probs=130.4
Q ss_pred CCCeEEEEECCCCCEEEEEECC-C--cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEE-ecCCCe--EEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD-G--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCDKT--AIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d-g--~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s-gs~D~~--v~iwd~~~~ 286 (502)
...+.+..|||||+.|+..+.+ + .|++|+..+.....+....+.....+|+|+|+.|+. .+.++. |.+||+.++
T Consensus 217 ~~~~~~p~wSPDG~~La~~s~~~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg 296 (448)
T PRK04792 217 PEPLMSPAWSPDGRKLAYVSFENRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATK 296 (448)
T ss_pred CCcccCceECCCCCEEEEEEecCCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCC
Confidence 3467889999999988876543 3 577888765443334333344457899999998764 455554 555565544
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CC--cEEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV--TAKI 363 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg--~i~i 363 (502)
+.. .+..+.......+|+|||+.|+..+. ++ .|.+
T Consensus 297 ~~~------------------------------------------~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~ 334 (448)
T PRK04792 297 ALT------------------------------------------RITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYR 334 (448)
T ss_pred CeE------------------------------------------ECccCCCCccceEECCCCCEEEEEECCCCCceEEE
Confidence 321 12223334456889999998766554 34 4666
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
+|+.+++... +...........|+|+|. .++++...++ .|.++|+.+++.. .+... .......|+||
T Consensus 335 ~dl~~g~~~~-Lt~~g~~~~~~~~SpDG~--------~l~~~~~~~g~~~I~~~dl~~g~~~-~lt~~-~~d~~ps~spd 403 (448)
T PRK04792 335 VNLASGKVSR-LTFEGEQNLGGSITPDGR--------SMIMVNRTNGKFNIARQDLETGAMQ-VLTST-RLDESPSVAPN 403 (448)
T ss_pred EECCCCCEEE-EecCCCCCcCeeECCCCC--------EEEEEEecCCceEEEEEECCCCCeE-EccCC-CCCCCceECCC
Confidence 6776665432 222222234568899886 3444444445 4555788777643 23322 12234589999
Q ss_pred CCEEEEEeC-CC--cEEEEeCCCCeeEEEEec-CCCEEEEEECCC
Q 010759 442 GEYLASGSL-DK--SMHIWSLKEGKIVKTYTG-NGGIFEVCWNKE 482 (502)
Q Consensus 442 g~~lasgs~-Dg--~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~ 482 (502)
|++|+..+. ++ .+.+++. +|.....+.. .+.+...+|+|-
T Consensus 404 G~~I~~~~~~~g~~~l~~~~~-~G~~~~~l~~~~g~~~~p~Wsp~ 447 (448)
T PRK04792 404 GTMVIYSTTYQGKQVLAAVSI-DGRFKARLPAGQGEVKSPAWSPF 447 (448)
T ss_pred CCEEEEEEecCCceEEEEEEC-CCCceEECcCCCCCcCCCccCCC
Confidence 998876554 33 3677776 4555555543 455778899883
No 256
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.39 E-value=1.5e-08 Score=98.32 Aligned_cols=265 Identities=15% Similarity=0.238 Sum_probs=165.0
Q ss_pred EEEEECC----CcEEEEEC--CCceeE---eecCCCCCEEEEEecCCCCEEEEecC----CCeEEEEeccCc--ce--eE
Q 010759 228 LATGSYD----GQARIWST--NGDLKC---TLSKHKGPIFSLKWNKKGDYLLTGSC----DKTAIVWDVKTE--EW--KQ 290 (502)
Q Consensus 228 l~sg~~d----g~i~iw~~--~~~~~~---~~~~h~~~V~~l~~~~~~~~l~sgs~----D~~v~iwd~~~~--~~--~~ 290 (502)
++.|++. +.|.+|.. ...... .+. -......|+++|++++|++... .+.|..|.+... .+ +.
T Consensus 2 ~~vgsy~~~~~~gI~~~~~d~~~g~l~~~~~~~-~~~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~ 80 (345)
T PF10282_consen 2 LYVGSYTNGKGGGIYVFRFDEETGTLTLVQTVA-EGENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLN 80 (345)
T ss_dssp EEEEECCSSSSTEEEEEEEETTTTEEEEEEEEE-ESSSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEE
T ss_pred EEEEcCCCCCCCcEEEEEEcCCCCCceEeeeec-CCCCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEee
Confidence 4556665 68888876 222221 222 2234467889999999998876 578999987653 33 22
Q ss_pred EeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCccee----eec----------CCCcceeEEEEcCCCCEEEE
Q 010759 291 QFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIK----TFA----------GHQGEVNCVKWDPTGSLLAS 354 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~----~~~----------~h~~~v~~v~~~p~~~~l~s 354 (502)
...........+... ....+++.-.++.+.++++.....+. .+. .-.....++.|+|+|+++++
T Consensus 81 ~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v 160 (345)
T PF10282_consen 81 SVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYV 160 (345)
T ss_dssp EEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEE
T ss_pred eeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEE
Confidence 333223333445443 33445555678999999998743221 111 11234678999999998877
Q ss_pred EeC-CCcEEEEeCCCCc--ee--eecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--CCeE--EE
Q 010759 355 CSD-DVTAKIWNMKQDK--YV--HDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--LGKL--LY 424 (502)
Q Consensus 355 gs~-dg~i~iwd~~~~~--~~--~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~~~~--~~ 424 (502)
... ...|.+|++.... +. ..+. .....-..+.|+|++. .+.+..-.++.|.++++. .+.. +.
T Consensus 161 ~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh~~f~pdg~--------~~Yv~~e~s~~v~v~~~~~~~g~~~~~~ 232 (345)
T PF10282_consen 161 PDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRHLAFSPDGK--------YAYVVNELSNTVSVFDYDPSDGSLTEIQ 232 (345)
T ss_dssp EETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEEEEE-TTSS--------EEEEEETTTTEEEEEEEETTTTEEEEEE
T ss_pred EecCCCEEEEEEEeCCCceEEEeeccccccCCCCcEEEEcCCcC--------EEEEecCCCCcEEEEeecccCCceeEEE
Confidence 643 3479999987654 21 1222 2334567889999875 345567778999999987 4432 23
Q ss_pred EeeCC------CCCEEEEEECCCCCEEEEEe-CCCcEEEEeCC--CCee--EEEEecCC-CEEEEEECCCCCEEEEEE-C
Q 010759 425 SLNGH------REPVYSLAFSPTGEYLASGS-LDKSMHIWSLK--EGKI--VKTYTGNG-GIFEVCWNKEGDKIAACF-A 491 (502)
Q Consensus 425 ~~~~h------~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~--~~~~--~~~~~~~~-~i~~~~ws~~g~~la~~~-~ 491 (502)
.+... ......|+++|||++|.++. ...+|.+|++. +|++ +..+...+ ....++++|+|++|+++. .
T Consensus 233 ~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~sI~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~ 312 (345)
T PF10282_consen 233 TISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSNSISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQD 312 (345)
T ss_dssp EEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTTEEEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETT
T ss_pred EeeeccccccccCCceeEEEecCCCEEEEEeccCCEEEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecC
Confidence 33211 12578899999999987665 46789999993 3443 44444433 378999999999888776 5
Q ss_pred CCeEEEEEee
Q 010759 492 NHTVCVLDFR 501 (502)
Q Consensus 492 ~~~v~v~~~~ 501 (502)
++.|.||++.
T Consensus 313 s~~v~vf~~d 322 (345)
T PF10282_consen 313 SNTVSVFDID 322 (345)
T ss_dssp TTEEEEEEEE
T ss_pred CCeEEEEEEe
Confidence 6789999864
No 257
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.37 E-value=2.5e-10 Score=100.69 Aligned_cols=236 Identities=16% Similarity=0.260 Sum_probs=154.3
Q ss_pred CCeEEEEECC---CCC-EEEEEECCCcEEEEECCCce-eEeecCCC---C---CEEEEEecCCCCEEEEecCCCeEEEEe
Q 010759 214 KDVTTLDWNG---EGT-LLATGSYDGQARIWSTNGDL-KCTLSKHK---G---PIFSLKWNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 214 ~~V~~l~~s~---~~~-~l~sg~~dg~i~iw~~~~~~-~~~~~~h~---~---~V~~l~~~~~~~~l~sgs~D~~v~iwd 282 (502)
..+..+.|.. +|. .++-+-.+|.|.++...... ...+.+-. - ...++.|++.+..++++-.+|.+.+-+
T Consensus 70 s~~~dm~w~~~~~~g~~~l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~ 149 (339)
T KOG0280|consen 70 STEFDMLWRIRETDGDFNLLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVY 149 (339)
T ss_pred cccceeeeeeccCCccceeeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEe
Confidence 4466667753 344 45667778888888754322 22222211 1 234677888888888877777766433
Q ss_pred ccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcE
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTA 361 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i 361 (502)
...+.+ +.++.+++|.-++..+.|+.. .+++.+|++|+.+
T Consensus 150 ~t~~~l---------------------------------------e~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l 190 (339)
T KOG0280|consen 150 ETEMVL---------------------------------------EKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSL 190 (339)
T ss_pred cceeee---------------------------------------eecccccccceeeeeeecccCCCceEEecCCCceE
Confidence 221110 123456778888888888754 3689999999999
Q ss_pred EEEeCC-CCceeee-cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEEEEE
Q 010759 362 KIWNMK-QDKYVHD-LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 362 ~iwd~~-~~~~~~~-~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~ 438 (502)
..||++ .+.++.. .+.|...|.+|.-+|.- ..++++|+.|-+|++||.+ .+++++.-. -.+.|+.+.+
T Consensus 191 ~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~--------~~~I~TGsYDe~i~~~DtRnm~kPl~~~~-v~GGVWRi~~ 261 (339)
T KOG0280|consen 191 SCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPK--------PTYIATGSYDECIRVLDTRNMGKPLFKAK-VGGGVWRIKH 261 (339)
T ss_pred EEEEecCCcceeeecceeeecceEEEecCCCC--------CceEEEeccccceeeeehhcccCccccCc-cccceEEEEe
Confidence 999998 4444433 55678888888877653 2489999999999999999 466665543 3478999999
Q ss_pred CCCC--CEEEEEeCCCcEEEEeCCCCee-----EEEEecC-CCEEEEEECCCCCEEEEEE-CCCeEE-EE
Q 010759 439 SPTG--EYLASGSLDKSMHIWSLKEGKI-----VKTYTGN-GGIFEVCWNKEGDKIAACF-ANHTVC-VL 498 (502)
Q Consensus 439 spdg--~~lasgs~Dg~i~iw~~~~~~~-----~~~~~~~-~~i~~~~ws~~g~~la~~~-~~~~v~-v~ 498 (502)
+|.- ..|+++-..| .+|-+...+.. ...+..+ +-+++-.|+.....||+|+ .|+.+. +|
T Consensus 262 ~p~~~~~lL~~CMh~G-~ki~~~~~~~~e~~~~~~s~~~hdSl~YG~DWd~~~~~lATCsFYDk~~~~~W 330 (339)
T KOG0280|consen 262 HPEIFHRLLAACMHNG-AKILDSSDKVLEFQIVLPSDKIHDSLCYGGDWDSKDSFLATCSFYDKKIRQLW 330 (339)
T ss_pred cchhhhHHHHHHHhcC-ceEEEecccccchheeeeccccccceeeccccccccceeeeeeccccceeeee
Confidence 9963 4566666665 66666655432 2223333 3367778877767899984 455533 55
No 258
>PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3.1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H.
Probab=99.36 E-value=8.2e-08 Score=93.24 Aligned_cols=258 Identities=13% Similarity=0.235 Sum_probs=160.2
Q ss_pred CCeEEEEECCCCCEEEEEEC----CCcEEEEECCCc---e--eEeecCCCCCEEEEEecCCCCEEEEec-CCCeEEEEec
Q 010759 214 KDVTTLDWNGEGTLLATGSY----DGQARIWSTNGD---L--KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDV 283 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~----dg~i~iw~~~~~---~--~~~~~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd~ 283 (502)
.....++++|++++|++... ++.|..|.+... + .............++++|++.+|+++. .+|+|.++++
T Consensus 37 ~~Ps~l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~~i~~~~~g~~l~vany~~g~v~v~~l 116 (345)
T PF10282_consen 37 ENPSWLAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPCHIAVDPDGRFLYVANYGGGSVSVFPL 116 (345)
T ss_dssp SSECCEEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred CCCceEEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcEEEEEecCCCEEEEEEccCCeEEEEEc
Confidence 34567889999999999877 468888876532 2 222222334456789999999988775 5899999999
Q ss_pred cC-cceeEEe--eec-----------ccCeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcc-e---eeec-CCCcceeE
Q 010759 284 KT-EEWKQQF--EFH-----------SGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRP-I---KTFA-GHQGEVNC 342 (502)
Q Consensus 284 ~~-~~~~~~~--~~~-----------~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~-~---~~~~-~h~~~v~~ 342 (502)
.. +...... ..+ ......+.+.++ ..+++.-....|+++++..... + ..+. .......-
T Consensus 117 ~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~~~~~~~~G~GPRh 196 (345)
T PF10282_consen 117 DDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPVDSIKVPPGSGPRH 196 (345)
T ss_dssp CTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEEEEEECSTTSSEEE
T ss_pred cCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEeeccccccCCCCcE
Confidence 76 4433221 111 122445656544 3344555566888888876541 1 1222 22345678
Q ss_pred EEEcCCCCEEEEE-eCCCcEEEEeCC--CCce--eeeccc------CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe
Q 010759 343 VKWDPTGSLLASC-SDDVTAKIWNMK--QDKY--VHDLRE------HSKEIYTIRWSPTGSGTNNPNQQLILASASFDST 411 (502)
Q Consensus 343 v~~~p~~~~l~sg-s~dg~i~iwd~~--~~~~--~~~~~~------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~ 411 (502)
+.|+|++++++.. -.+++|.++++. .+.. +..+.. .......|+++|+|. .+.++.-..++
T Consensus 197 ~~f~pdg~~~Yv~~e~s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~--------~lyvsnr~~~s 268 (345)
T PF10282_consen 197 LAFSPDGKYAYVVNELSNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGR--------FLYVSNRGSNS 268 (345)
T ss_dssp EEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSS--------EEEEEECTTTE
T ss_pred EEEcCCcCEEEEecCCCCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCC--------EEEEEeccCCE
Confidence 9999999887544 557889999887 3322 222111 112577889999886 45566667889
Q ss_pred EEEEeCC--CCe--EEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeC--CCCeeEEEE--ecCCCEEEEEE
Q 010759 412 VKLWDVE--LGK--LLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSL--KEGKIVKTY--TGNGGIFEVCW 479 (502)
Q Consensus 412 i~iwd~~--~~~--~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~--~~~~~~~~~--~~~~~i~~~~w 479 (502)
|.+|++. +++ .+..+......-..++++|+|++|+++. .++.|.+|++ .+|.+...- ..-....++.|
T Consensus 269 I~vf~~d~~~g~l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 269 ISVFDLDPATGTLTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEEECTTTTTEEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEEEEEecCCCceEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 9999983 343 3334443334578999999999998877 5678999976 567765443 22344566665
No 259
>KOG0280 consensus Uncharacterized conserved protein [Amino acid transport and metabolism]
Probab=99.35 E-value=9.9e-11 Score=103.20 Aligned_cols=181 Identities=19% Similarity=0.292 Sum_probs=132.0
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCC------cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--eeecccCCCc
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQ------GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLREHSKE 381 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~------~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~~~~~ 381 (502)
++.+...|.|.++..........+.+-. ....++.|++.+..++++-.+|.+.+-+...... ++..+.|.-+
T Consensus 88 l~~a~a~G~i~~~r~~~~~ss~~L~~ls~~ki~~~~~lslD~~~~~~~i~vs~s~G~~~~v~~t~~~le~vq~wk~He~E 167 (339)
T KOG0280|consen 88 LLDAHARGQIQLYRNDEDESSVHLRGLSSKKISVVEALSLDISTSGTKIFVSDSRGSISGVYETEMVLEKVQTWKVHEFE 167 (339)
T ss_pred eeeccccceEEEEeeccceeeeeecccchhhhhheeeeEEEeeccCceEEEEcCCCcEEEEecceeeeeeccccccccee
Confidence 3444556666666655433323333221 1346789999999999999999998655444433 3477889999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEE-eeCCCCCEEEEEECCC-CCEEEEEeCCCcEEEEe
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYS-LNGHREPVYSLAFSPT-GEYLASGSLDKSMHIWS 458 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~-~~~h~~~v~~l~~spd-g~~lasgs~Dg~i~iw~ 458 (502)
++...|+.... .++.+|+.||.+..||++ .++.++. .+-|...|.+|.-||. +.+|+||+.|-.|++||
T Consensus 168 ~Wta~f~~~~p--------nlvytGgDD~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~D 239 (339)
T KOG0280|consen 168 AWTAKFSDKEP--------NLVYTGGDDGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLD 239 (339)
T ss_pred eeeeecccCCC--------ceEEecCCCceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeeee
Confidence 99998875432 388999999999999999 4455655 5568889999988875 68999999999999999
Q ss_pred CCC-CeeEEEEecCCCEEEEEECCCC--CEEEEEECCCeEEEEE
Q 010759 459 LKE-GKIVKTYTGNGGIFEVCWNKEG--DKIAACFANHTVCVLD 499 (502)
Q Consensus 459 ~~~-~~~~~~~~~~~~i~~~~ws~~g--~~la~~~~~~~v~v~~ 499 (502)
.+. ++.+..-.-.++|+-+.|+|.- ..||+|..+| ..|.+
T Consensus 240 tRnm~kPl~~~~v~GGVWRi~~~p~~~~~lL~~CMh~G-~ki~~ 282 (339)
T KOG0280|consen 240 TRNMGKPLFKAKVGGGVWRIKHHPEIFHRLLAACMHNG-AKILD 282 (339)
T ss_pred hhcccCccccCccccceEEEEecchhhhHHHHHHHhcC-ceEEE
Confidence 984 6666655556889999999964 5677887776 34443
No 260
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.35 E-value=6.1e-12 Score=133.93 Aligned_cols=201 Identities=17% Similarity=0.332 Sum_probs=153.9
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
++.|-..|.++.=+|...+-+||+.||.|++|.+..+. ++.+.+. .+ ...|+.+.|+.+|+.+.
T Consensus 2204 ~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~----------~v~~~rt-----~g-~s~vtr~~f~~qGnk~~ 2267 (2439)
T KOG1064|consen 2204 IKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQ----------QVVCFRT-----AG-NSRVTRSRFNHQGNKFG 2267 (2439)
T ss_pred eecccCceeeecCCCCCceEEecCCCceEEEEeccCCC----------eEEEeec-----cC-cchhhhhhhcccCCcee
Confidence 44455678888889999999999999999999986553 2333332 12 25699999999999999
Q ss_pred EEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEec---CCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 230 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS---CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs---~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.+..||.+.+|..........+.|......++|-. ..+++++ .++.+.+||..-..
T Consensus 2268 i~d~dg~l~l~q~~pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~------------------- 2326 (2439)
T KOG1064|consen 2268 IVDGDGDLSLWQASPKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPP------------------- 2326 (2439)
T ss_pred eeccCCceeecccCCcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCc-------------------
Confidence 99999999999998777777788988888887765 3455543 35678888742110
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
....+. ..|.+.++++++-|..++|++||.+|.|++||++..+.++.++.
T Consensus 2327 -------------------~~s~v~--~~H~~gaT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~~~--------- 2376 (2439)
T KOG1064|consen 2327 -------------------MNSLVH--TCHDGGATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTFQA--------- 2376 (2439)
T ss_pred -------------------ccceee--eecCCCceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHhhh---------
Confidence 001111 56889999999999999999999999999999999888877764
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 427 (502)
+. . +.++++|+..|+|+||++.....++++.
T Consensus 2377 ~~--~--------~~~f~~~ss~g~ikIw~~s~~~ll~~~p 2407 (2439)
T KOG1064|consen 2377 LD--T--------REYFVTGSSEGNIKIWRLSEFGLLHTFP 2407 (2439)
T ss_pred hh--h--------hheeeccCcccceEEEEccccchhhcCc
Confidence 11 1 2378999999999999998877766654
No 261
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.33 E-value=1.4e-08 Score=100.34 Aligned_cols=295 Identities=14% Similarity=0.140 Sum_probs=176.7
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-
Q 010759 165 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN- 243 (502)
Q Consensus 165 d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~- 243 (502)
.+..++.++.++.|.-+|..+|+....... ... .... .. .++..++.++.++.+..+|..
T Consensus 64 ~~~~v~v~~~~g~v~a~d~~tG~~~W~~~~-----------~~~--~~~~----p~--v~~~~v~v~~~~g~l~ald~~t 124 (377)
T TIGR03300 64 AGGKVYAADADGTVVALDAETGKRLWRVDL-----------DER--LSGG----VG--ADGGLVFVGTEKGEVIALDAED 124 (377)
T ss_pred ECCEEEEECCCCeEEEEEccCCcEeeeecC-----------CCC--cccc----eE--EcCCEEEEEcCCCEEEEEECCC
Confidence 366888888999999999888764321111 000 0011 11 145678888899999999974
Q ss_pred CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE-----EEecCCCceEEEEcCCCe
Q 010759 244 GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL-----DVDWRNNVSFATSSTDNM 318 (502)
Q Consensus 244 ~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~d~~ 318 (502)
+......... +.+.+.-.. .+..++.++.++.+..||+++++.+-.+........ .....+ ..++.+..++.
T Consensus 125 G~~~W~~~~~-~~~~~~p~v-~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~~-~~v~~~~~~g~ 201 (377)
T TIGR03300 125 GKELWRAKLS-SEVLSPPLV-ANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIAD-GGVLVGFAGGK 201 (377)
T ss_pred CcEeeeeccC-ceeecCCEE-ECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEEC-CEEEEECCCCE
Confidence 5554443321 222211111 245788888899999999999987655543221110 001112 24556677788
Q ss_pred EEEEEcCCCcceeeecCC-----Cc--ceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEcc
Q 010759 319 IYVCKIGENRPIKTFAGH-----QG--EVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 389 (502)
Q Consensus 319 i~~~~~~~~~~~~~~~~h-----~~--~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp 389 (502)
++.++..+++.+-..... .. .+..+.-+| .+..++.++.+|.+..||..+++.+-..... .......
T Consensus 202 v~ald~~tG~~~W~~~~~~~~g~~~~~~~~~~~~~p~~~~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~~-- 277 (377)
T TIGR03300 202 LVALDLQTGQPLWEQRVALPKGRTELERLVDVDGDPVVDGGQVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPAV-- 277 (377)
T ss_pred EEEEEccCCCEeeeeccccCCCCCchhhhhccCCccEEECCEEEEEEcCCEEEEEECCCCcEEEeeccC--CccCceE--
Confidence 888888776644322110 00 000011111 2457778888999999999988766543311 1111111
Q ss_pred CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC-CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 390 TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE-PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 390 ~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.+ + .+..++.+|.|..+|..+++.++....... ...+... .+..|++++.+|.|.+++..+|+++..+
T Consensus 278 ~~-------~--~vyv~~~~G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~tG~~~~~~ 346 (377)
T TIGR03300 278 DD-------N--RLYVTDADGVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSREDGSFVARL 346 (377)
T ss_pred eC-------C--EEEEECCCCeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECCCCCEEEEE
Confidence 11 1 355677899999999999998877632221 1222222 3668899999999999999999999888
Q ss_pred ecCC-CEE-EEEECCCCCEEEEEECCCeEEEE
Q 010759 469 TGNG-GIF-EVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 469 ~~~~-~i~-~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
...+ .+. +.++ .++.|..++.||.|+.|
T Consensus 347 ~~~~~~~~~sp~~--~~~~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 347 KTDGSGIASPPVV--VGDGLLVQTRDGDLYAF 376 (377)
T ss_pred EcCCCccccCCEE--ECCEEEEEeCCceEEEe
Confidence 7544 222 2222 23568899999988654
No 262
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.32 E-value=6.7e-09 Score=111.64 Aligned_cols=274 Identities=14% Similarity=0.250 Sum_probs=174.3
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEE----ECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIW----STNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw----~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
....|.++.|-++...++.+..+|.|.+. +...........-...|.+++||||+..|+....++++.+-+ ++.+
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~~~E~VG~vd~GI~a~~WSPD~Ella~vT~~~~l~~mt-~~fd 152 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDEDEIEIVGSVDSGILAASWSPDEELLALVTGEGNLLLMT-RDFD 152 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCceeEEEEEEcCcEEEEEECCCcCEEEEEeCCCEEEEEe-ccce
Confidence 34679999999999999999999999999 544444444444567899999999999999999999998875 4444
Q ss_pred eeEEeeecc-----cCeEEEecCCC-ceEEEEcCCCeEEEEEcCC-Ccc---eeeecCCCcceeEEEEcCCCCEEEEEeC
Q 010759 288 WKQQFEFHS-----GPTLDVDWRNN-VSFATSSTDNMIYVCKIGE-NRP---IKTFAGHQGEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 288 ~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~-~~~---~~~~~~h~~~v~~v~~~p~~~~l~sgs~ 357 (502)
.+.....+. .....+.|-.. ..|=.+.....-+ .... ..+ ...+. +...-..++|..||.+||+.+-
T Consensus 153 ~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~--~~~~p~~~~~d~~~~s-~dd~~~~ISWRGDG~yFAVss~ 229 (928)
T PF04762_consen 153 PISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAAR--QLRDPTVPKVDEGKLS-WDDGRVRISWRGDGEYFAVSSV 229 (928)
T ss_pred EEEEeecCccccCCCceeeeccCcccCccCcchhhhhhh--hccCCCCCccccCccc-cCCCceEEEECCCCcEEEEEEE
Confidence 444433322 12233444211 1111110000000 0000 000 01122 3334567999999999998875
Q ss_pred ---C---CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCeEEEEe--
Q 010759 358 ---D---VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGKLLYSL-- 426 (502)
Q Consensus 358 ---d---g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~~~~~~-- 426 (502)
. ..+|||+-. |.....-..-.+--.+++|.|.|. +||+... .-.|.+|.- +|-.-..|
T Consensus 230 ~~~~~~~R~iRVy~Re-G~L~stSE~v~gLe~~l~WrPsG~---------lIA~~q~~~~~~~VvFfEr-NGLrhgeF~l 298 (928)
T PF04762_consen 230 EPETGSRRVIRVYSRE-GELQSTSEPVDGLEGALSWRPSGN---------LIASSQRLPDRHDVVFFER-NGLRHGEFTL 298 (928)
T ss_pred EcCCCceeEEEEECCC-ceEEeccccCCCccCCccCCCCCC---------EEEEEEEcCCCcEEEEEec-CCcEeeeEec
Confidence 3 479999854 554433333334446789999996 6666543 345666653 34332222
Q ss_pred --eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe--eEEEE--ecCCCEEEEEECCC-CCEEEEEECCCeEEEEE
Q 010759 427 --NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK--IVKTY--TGNGGIFEVCWNKE-GDKIAACFANHTVCVLD 499 (502)
Q Consensus 427 --~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~--~~~~~--~~~~~i~~~~ws~~-g~~la~~~~~~~v~v~~ 499 (502)
......|..|.|++|+..||..-.|. |.+|...+.. +-+.+ .....+..+.|+|. ...|...+.+|.+..++
T Consensus 299 ~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p~~L~v~t~~g~~~~~~ 377 (928)
T PF04762_consen 299 RFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKPLRLHVLTSNGQYEIYD 377 (928)
T ss_pred CCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCCCEEEEEecCCcEEEEE
Confidence 23456799999999999999977665 9999998865 22333 33344556999995 46788888888887776
Q ss_pred ee
Q 010759 500 FR 501 (502)
Q Consensus 500 ~~ 501 (502)
+.
T Consensus 378 ~~ 379 (928)
T PF04762_consen 378 FA 379 (928)
T ss_pred EE
Confidence 63
No 263
>KOG1064 consensus RAVE (regulator of V-ATPase assembly) complex subunit RAV1/DMX protein, WD repeat superfamily [General function prediction only]
Probab=99.32 E-value=1.1e-11 Score=132.20 Aligned_cols=246 Identities=18% Similarity=0.298 Sum_probs=177.9
Q ss_pred CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc-cCeEEE
Q 010759 224 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDV 302 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~~~~ 302 (502)
.++.+.....++...-|...+.-. .+..+-..|.++.-||...+.+||+.||.|++|-...+..+..++... ..+..+
T Consensus 2179 ~s~~~~~~n~~~~~~tq~~~~~~~-~~k~~v~~v~r~~sHp~~~~Yltgs~dgsv~~~~w~~~~~v~~~rt~g~s~vtr~ 2257 (2439)
T KOG1064|consen 2179 FSNRFTPSNLPWLGSTQTSRGASV-MIKHPVENVRRMTSHPSDPYYLTGSQDGSVRMFEWGHGQQVVCFRTAGNSRVTRS 2257 (2439)
T ss_pred ccccCCcccCCccccceeccccee-EeecccCceeeecCCCCCceEEecCCCceEEEEeccCCCeEEEeeccCcchhhhh
Confidence 345555556666666666544322 234455678888889999999999999999999887776666554332 233334
Q ss_pred ec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe---CCCcEEEEeCCC---Cceeeec
Q 010759 303 DW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS---DDVTAKIWNMKQ---DKYVHDL 375 (502)
Q Consensus 303 ~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs---~dg~i~iwd~~~---~~~~~~~ 375 (502)
.| .....|..+..||.+-+|... +++......|......+.|-. ..+++++ +++.+.+||..- ..+++
T Consensus 2258 ~f~~qGnk~~i~d~dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~--s~~~tag~s~d~~n~~lwDtl~~~~~s~v~-- 2332 (2439)
T KOG1064|consen 2258 RFNHQGNKFGIVDGDGDLSLWQAS-PKPYTSWQCHNKALSDFRFIG--SLLATAGRSSDNRNVCLWDTLLPPMNSLVH-- 2332 (2439)
T ss_pred hhcccCCceeeeccCCceeecccC-CcceeccccCCccccceeeee--hhhhccccCCCCCcccchhcccCcccceee--
Confidence 44 345667888899999999987 677778888988888888864 5666664 467899999642 23344
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
..|.+..+++++.|... +|+||+.+|.|++||++..++++.+.. +. ...++++|+..|.|+
T Consensus 2333 ~~H~~gaT~l~~~P~~q---------llisggr~G~v~l~D~rqrql~h~~~~---------~~-~~~~f~~~ss~g~ik 2393 (2439)
T KOG1064|consen 2333 TCHDGGATVLAYAPKHQ---------LLISGGRKGEVCLFDIRQRQLRHTFQA---------LD-TREYFVTGSSEGNIK 2393 (2439)
T ss_pred eecCCCceEEEEcCcce---------EEEecCCcCcEEEeehHHHHHHHHhhh---------hh-hhheeeccCcccceE
Confidence 67999999999999865 789999999999999998777655543 44 567999999999999
Q ss_pred EEeCCCCeeEEEEecCC---CE---EEEEECC-CCCEEEEEECCCe
Q 010759 456 IWSLKEGKIVKTYTGNG---GI---FEVCWNK-EGDKIAACFANHT 494 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~---~i---~~~~ws~-~g~~la~~~~~~~ 494 (502)
||++....++++++... ++ ...+..- ..++|.+|+.||+
T Consensus 2394 Iw~~s~~~ll~~~p~e~ak~gfFr~~g~Q~~v~~~nrifsCgad~~ 2439 (2439)
T KOG1064|consen 2394 IWRLSEFGLLHTFPSEHAKQGFFRNIGMQINVGQCNRIFSCGADGT 2439 (2439)
T ss_pred EEEccccchhhcCchhhcccchhhhcCceeeeccCceEEEecCCCC
Confidence 99999988888886532 22 1122211 2467778877763
No 264
>KOG2314 consensus Translation initiation factor 3, subunit b (eIF-3b) [Translation, ribosomal structure and biogenesis]
Probab=99.32 E-value=8.3e-10 Score=105.34 Aligned_cols=274 Identities=17% Similarity=0.272 Sum_probs=170.4
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC-----------CeEEEEecc
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-----------KTAIVWDVK 284 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-----------~~v~iwd~~ 284 (502)
-+-+.|||.|.||+|--.- .|.+|--..-..+.--.|. .|.-+.|||..+||+|-|.- ..++|||+.
T Consensus 213 etyv~wSP~GTYL~t~Hk~-GI~lWGG~~f~r~~RF~Hp-~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~ 290 (698)
T KOG2314|consen 213 ETYVRWSPKGTYLVTFHKQ-GIALWGGESFDRIQRFYHP-GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIA 290 (698)
T ss_pred eeeEEecCCceEEEEEecc-ceeeecCccHHHHHhccCC-CceeeecCCccceEEEecCCccccCcccCCCceEEEEEcc
Confidence 4678999999999987664 4778965432222222354 46789999999999987642 579999999
Q ss_pred CcceeEEeeecccCe---EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC---
Q 010759 285 TEEWKQQFEFHSGPT---LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD--- 358 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d--- 358 (502)
+|.....|....++. .-+.|+.+..+.+.-..++|.+++...-.++..-.-.-..|....|+|.+++||-=+..
T Consensus 291 tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llAYwtpe~~~ 370 (698)
T KOG2314|consen 291 TGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLAYWTPETNN 370 (698)
T ss_pred ccchhcceeccCCCccccceEEeccCCceeEEeccceEEEEecCceeeecccccCCccccCcccCCCcceEEEEcccccC
Confidence 999888887633322 23467666666666555778888765422211111112457778899998888754321
Q ss_pred --CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE----------EeCCCeEEEEeCCCCeEEEEe
Q 010759 359 --VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS----------ASFDSTVKLWDVELGKLLYSL 426 (502)
Q Consensus 359 --g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s----------gs~dg~i~iwd~~~~~~~~~~ 426 (502)
..+.+-.+.+++.+++...++-.-..+.|..+|. +|+. .+.-.++-|+.++........
T Consensus 371 ~parvtL~evPs~~~iRt~nlfnVsDckLhWQk~gd---------yLcvkvdR~tK~~~~g~f~n~eIfrireKdIpve~ 441 (698)
T KOG2314|consen 371 IPARVTLMEVPSKREIRTKNLFNVSDCKLHWQKSGD---------YLCVKVDRHTKSKVKGQFSNLEIFRIREKDIPVEV 441 (698)
T ss_pred CcceEEEEecCccceeeeccceeeeccEEEeccCCc---------EEEEEEEeeccccccceEeeEEEEEeeccCCCcee
Confidence 1344555555555554433332233455655553 3321 122224556655543332222
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEeCCC-C---eeEEEEecCCCEEEEEECCCCCEEEEE---ECCCeEE
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSL---DKSMHIWSLKE-G---KIVKTYTGNGGIFEVCWNKEGDKIAAC---FANHTVC 496 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~---Dg~i~iw~~~~-~---~~~~~~~~~~~i~~~~ws~~g~~la~~---~~~~~v~ 496 (502)
-....+|...+|-|.|..+++-+. -.++.+|.+++ . +++..+.. .-.+.+.|+|.|..+|++ +..|.+.
T Consensus 442 velke~vi~FaWEP~gdkF~vi~g~~~k~tvsfY~~e~~~~~~~lVk~~dk-~~~N~vfwsPkG~fvvva~l~s~~g~l~ 520 (698)
T KOG2314|consen 442 VELKESVIAFAWEPHGDKFAVISGNTVKNTVSFYAVETNIKKPSLVKELDK-KFANTVFWSPKGRFVVVAALVSRRGDLE 520 (698)
T ss_pred eecchheeeeeeccCCCeEEEEEccccccceeEEEeecCCCchhhhhhhcc-cccceEEEcCCCcEEEEEEecccccceE
Confidence 235578899999999987665433 25788998873 2 34444443 346899999999988765 4478888
Q ss_pred EEEee
Q 010759 497 VLDFR 501 (502)
Q Consensus 497 v~~~~ 501 (502)
++|..
T Consensus 521 F~D~~ 525 (698)
T KOG2314|consen 521 FYDTD 525 (698)
T ss_pred EEecc
Confidence 88753
No 265
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.32 E-value=6.8e-08 Score=91.77 Aligned_cols=240 Identities=13% Similarity=0.124 Sum_probs=145.4
Q ss_pred ECCCCCEEEEEEC----------CCcEEEEECCCc-eeEeecCC-------CCCEEEEEecCCCCEEEEec-C-CCeEEE
Q 010759 221 WNGEGTLLATGSY----------DGQARIWSTNGD-LKCTLSKH-------KGPIFSLKWNKKGDYLLTGS-C-DKTAIV 280 (502)
Q Consensus 221 ~s~~~~~l~sg~~----------dg~i~iw~~~~~-~~~~~~~h-------~~~V~~l~~~~~~~~l~sgs-~-D~~v~i 280 (502)
+||||+.|+.+.. +..|.+||.... ....+.-- ......++++|+|++|+... . +..|-+
T Consensus 53 ~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~~~~~~ls~dgk~l~V~n~~p~~~V~V 132 (352)
T TIGR02658 53 VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTYPWMTSLTPDNKTLLFYQFSPSPAVGV 132 (352)
T ss_pred ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCccceEEECCCCCEEEEecCCCCCEEEE
Confidence 8999998888766 789999998653 33333321 12234788999999988765 3 789999
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC-Ccc----eeeecCCCcce-eEEEEcC-CCCEEE
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRP----IKTFAGHQGEV-NCVKWDP-TGSLLA 353 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~----~~~~~~h~~~v-~~v~~~p-~~~~l~ 353 (502)
.|+.+++.+.++.... +..-+...+...+ .-+.|+......+.. ++. ...|.+-..++ ..-.|.+ +|+++.
T Consensus 133 vD~~~~kvv~ei~vp~-~~~vy~t~e~~~~-~~~~Dg~~~~v~~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg~~~~ 210 (352)
T TIGR02658 133 VDLEGKAFVRMMDVPD-CYHIFPTANDTFF-MHCRDGSLAKVGYGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSGRLVW 210 (352)
T ss_pred EECCCCcEEEEEeCCC-CcEEEEecCCccE-EEeecCceEEEEecCCCceEEeeeeeecCCccccccCCceEcCCCcEEE
Confidence 9999999888776522 1111122222222 223333333322221 110 01111100010 0013455 788776
Q ss_pred EEeCCCcEEEEeCCCCc-----eeeeccc-------CCCcEEEEEEccCCCCCCCCCCcEEEEEEeC--------CCeEE
Q 010759 354 SCSDDVTAKIWNMKQDK-----YVHDLRE-------HSKEIYTIRWSPTGSGTNNPNQQLILASASF--------DSTVK 413 (502)
Q Consensus 354 sgs~dg~i~iwd~~~~~-----~~~~~~~-------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~--------dg~i~ 413 (502)
.... |+|.+-|+.... ....+.. ......-++++|++. .+|++.-.. .+.|.
T Consensus 211 vs~e-G~V~~id~~~~~~~~~~~~~~~~~~~~~~~wrP~g~q~ia~~~dg~-------~lyV~~~~~~~~thk~~~~~V~ 282 (352)
T TIGR02658 211 PTYT-GKIFQIDLSSGDAKFLPAIEAFTEAEKADGWRPGGWQQVAYHRARD-------RIYLLADQRAKWTHKTASRFLF 282 (352)
T ss_pred EecC-CeEEEEecCCCcceecceeeeccccccccccCCCcceeEEEcCCCC-------EEEEEecCCccccccCCCCEEE
Confidence 6666 999999964432 2221111 112223367777664 233322111 25799
Q ss_pred EEeCCCCeEEEEeeCCCCCEEEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEEecC
Q 010759 414 LWDVELGKLLYSLNGHREPVYSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
++|..+++.+..+.- ...+..|+|+|||+ +|.+.. .++.|.++|+.+++.+++...-
T Consensus 283 ViD~~t~kvi~~i~v-G~~~~~iavS~Dgkp~lyvtn~~s~~VsViD~~t~k~i~~i~~v 341 (352)
T TIGR02658 283 VVDAKTGKRLRKIEL-GHEIDSINVSQDAKPLLYALSTGDKTLYIFDAETGKELSSVNQL 341 (352)
T ss_pred EEECCCCeEEEEEeC-CCceeeEEECCCCCeEEEEeCCCCCcEEEEECcCCeEEeeeccC
Confidence 999999999988763 35789999999999 777665 5788999999999999987443
No 266
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=99.31 E-value=3.4e-08 Score=106.27 Aligned_cols=319 Identities=14% Similarity=0.287 Sum_probs=197.2
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEE----ecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIW----TIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
..+.|.++.|-++...|..+..+|.|.+. +..+. ....... -...|.+++||||+.+|
T Consensus 74 ~~~~ivs~~yl~d~~~l~~~~~~Gdi~~~~~~~~~~~~-----------~~E~VG~-------vd~GI~a~~WSPD~Ell 135 (928)
T PF04762_consen 74 PNDKIVSFQYLADSESLCIALASGDIILVREDPDPDED-----------EIEIVGS-------VDSGILAASWSPDEELL 135 (928)
T ss_pred CCCcEEEEEeccCCCcEEEEECCceEEEEEccCCCCCc-----------eeEEEEE-------EcCcEEEEEECCCcCEE
Confidence 34679999999999888888889999888 33221 1112111 14579999999999999
Q ss_pred EEEECCCcEEEEECCC------------------------ceeEeecC------------------------CCCCEEEE
Q 010759 229 ATGSYDGQARIWSTNG------------------------DLKCTLSK------------------------HKGPIFSL 260 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~------------------------~~~~~~~~------------------------h~~~V~~l 260 (502)
+..+.++++.+-+..- +....|.| +...-..+
T Consensus 136 a~vT~~~~l~~mt~~fd~i~E~~l~~~~~~~~~~VsVGWGkKeTQF~Gs~gK~aa~~~~~p~~~~~d~~~~s~dd~~~~I 215 (928)
T PF04762_consen 136 ALVTGEGNLLLMTRDFDPISEVPLDSDDFGESKHVSVGWGKKETQFHGSAGKAAARQLRDPTVPKVDEGKLSWDDGRVRI 215 (928)
T ss_pred EEEeCCCEEEEEeccceEEEEeecCccccCCCceeeeccCcccCccCcchhhhhhhhccCCCCCccccCccccCCCceEE
Confidence 9999999888764210 00011111 11233578
Q ss_pred EecCCCCEEEEecC------CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcC----CCeEEEEEcCCCcce
Q 010759 261 KWNKKGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSST----DNMIYVCKIGENRPI 330 (502)
Q Consensus 261 ~~~~~~~~l~sgs~------D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----d~~i~~~~~~~~~~~ 330 (502)
+|..||.||++.+- -+.+|||+- .|.+..+-+...+--..+.|++...++++.. ...|.++.... -..
T Consensus 216 SWRGDG~yFAVss~~~~~~~~R~iRVy~R-eG~L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~VvFfErNG-Lrh 293 (928)
T PF04762_consen 216 SWRGDGEYFAVSSVEPETGSRRVIRVYSR-EGELQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHDVVFFERNG-LRH 293 (928)
T ss_pred EECCCCcEEEEEEEEcCCCceeEEEEECC-CceEEeccccCCCccCCccCCCCCCEEEEEEEcCCCcEEEEEecCC-cEe
Confidence 89999999988764 257999984 4655544443333445678987776665532 23444444322 111
Q ss_pred eee----cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee--eecccC-CCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 331 KTF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV--HDLREH-SKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 331 ~~~----~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~~-~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
..| ......|..+.|++|+..||..-.|. |.+|-..+.... +.+... ...+..+.|+|... +.|
T Consensus 294 geF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~~-vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~p--------~~L 364 (928)
T PF04762_consen 294 GEFTLRFDPEEEKVIELAWNSDSEILAVWLEDR-VQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEKP--------LRL 364 (928)
T ss_pred eeEecCCCCCCceeeEEEECCCCCEEEEEecCC-ceEEEeeCCEEEEEEEEEccCCCCCCceEECCCCC--------CEE
Confidence 122 23456789999999999999877665 999987665432 333322 22344588988643 233
Q ss_pred EEEeCCCeEEEEeC----CCC--------eEEEEee-----------------------CCCCCEEEEEECCCCCEEEEE
Q 010759 404 ASASFDSTVKLWDV----ELG--------KLLYSLN-----------------------GHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 404 ~sgs~dg~i~iwd~----~~~--------~~~~~~~-----------------------~h~~~v~~l~~spdg~~lasg 448 (502)
...+.+|.+..+++ ..+ ..+..+. ....+|.+++|++++..+|+-
T Consensus 365 ~v~t~~g~~~~~~~~~~v~~s~~~~~~D~g~vaVIDG~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~avl 444 (928)
T PF04762_consen 365 HVLTSNGQYEIYDFAWDVSRSPGSSPNDNGTVAVIDGNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFAVL 444 (928)
T ss_pred EEEecCCcEEEEEEEEEEEecCCCCccCceEEEEEeCCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEEEE
Confidence 33444455544332 111 0111111 134679999999999889999
Q ss_pred eCCCcEEEEeCCCCe--------eEEEEe-----------cCCCEEEEEECCCCCEEEEEECC---CeEEEEEe
Q 010759 449 SLDKSMHIWSLKEGK--------IVKTYT-----------GNGGIFEVCWNKEGDKIAACFAN---HTVCVLDF 500 (502)
Q Consensus 449 s~Dg~i~iw~~~~~~--------~~~~~~-----------~~~~i~~~~ws~~g~~la~~~~~---~~v~v~~~ 500 (502)
..||.|.+|...... +...+. ....+..++|-.+...++....+ ..+.++++
T Consensus 445 ~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 518 (928)
T PF04762_consen 445 TSDGSLSIYEWDLKNMWSVKPPKLLSSISLDSMDISDSELPLGSLRQLAWLNDDTLLVLSDSDSNQSKIVLVDI 518 (928)
T ss_pred ECCCCEEEEEecCCCcccccCcchhhhcccccccccccccccccEEEEEEeCCCEEEEEEecCcccceEEEEEe
Confidence 999999999854321 111111 12346789998888777766654 45555554
No 267
>KOG2041 consensus WD40 repeat protein [General function prediction only]
Probab=99.30 E-value=1.7e-09 Score=106.17 Aligned_cols=224 Identities=18% Similarity=0.361 Sum_probs=152.2
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.+|.||+..|..+.|+.+.+.|-|...+|.|.+|-+..+....... .+...+-|.+++|+.+|..
T Consensus 65 QtLeGH~~sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW~EEMi---------------NnRnKSvV~SmsWn~dG~k 129 (1189)
T KOG2041|consen 65 QTLEGHNASVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSWCEEMI---------------NNRNKSVVVSMSWNLDGTK 129 (1189)
T ss_pred hhhccCcceEEEEEeccccccccccCCCceEEEEeeecccHHHHHh---------------hCcCccEEEEEEEcCCCcE
Confidence 5799999999999999999999999999999999987764321100 1123456899999999999
Q ss_pred EEEEECCCcEEEEECCCceeE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc-------e-eEE---eee
Q 010759 228 LATGSYDGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-------W-KQQ---FEF 294 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-------~-~~~---~~~ 294 (502)
+.....||.|.+=.++|.... .+.+ .-...+.|+++...++.+-..|.+.+||.+..- + +.. +..
T Consensus 130 IcIvYeDGavIVGsvdGNRIwgKeLkg--~~l~hv~ws~D~~~~Lf~~ange~hlydnqgnF~~Kl~~~c~Vn~tg~~s~ 207 (1189)
T KOG2041|consen 130 ICIVYEDGAVIVGSVDGNRIWGKELKG--QLLAHVLWSEDLEQALFKKANGETHLYDNQGNFERKLEKDCEVNGTGIFSN 207 (1189)
T ss_pred EEEEEccCCEEEEeeccceecchhcch--heccceeecccHHHHHhhhcCCcEEEecccccHHHhhhhceEEeeeeeecC
Confidence 999999999988777664332 1222 123467899999999999999999999965321 1 110 000
Q ss_pred cccCeEEEecC---------CCceEEEEcCCCeEEEEEcCC-CcceeeecCCCcceeEEEEcCCCCEEEEEeCCC-----
Q 010759 295 HSGPTLDVDWR---------NNVSFATSSTDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV----- 359 (502)
Q Consensus 295 ~~~~~~~~~~~---------~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg----- 359 (502)
....+..+.|. +.-.++.+-..|.+.+..-.. ..|+..-.| -.+..+.|+++|..||.|+.+.
T Consensus 208 ~~~kia~i~w~~g~~~~v~pdrP~lavcy~nGr~QiMR~eND~~Pvv~dtg--m~~vgakWnh~G~vLAvcG~~~da~~~ 285 (1189)
T KOG2041|consen 208 FPTKIAEIEWNTGPYQPVPPDRPRLAVCYANGRMQIMRSENDPEPVVVDTG--MKIVGAKWNHNGAVLAVCGNDSDADEP 285 (1189)
T ss_pred CCccccceeeccCccccCCCCCCEEEEEEcCceehhhhhcCCCCCeEEecc--cEeecceecCCCcEEEEccCcccccCc
Confidence 00112334442 234577777777776665432 233332222 4578899999999999998753
Q ss_pred ----cEEEEeCCCCceeeecccCCCcEEEEEEccCC
Q 010759 360 ----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 391 (502)
Q Consensus 360 ----~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g 391 (502)
.|.+|. .-|..+.+++.....|+++.|-..|
T Consensus 286 ~d~n~v~Fys-p~G~i~gtlkvpg~~It~lsWEg~g 320 (1189)
T KOG2041|consen 286 TDSNKVHFYS-PYGHIVGTLKVPGSCITGLSWEGTG 320 (1189)
T ss_pred cccceEEEec-cchhheEEEecCCceeeeeEEcCCc
Confidence 455554 3356667777777788887775433
No 268
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.29 E-value=4.6e-09 Score=115.02 Aligned_cols=249 Identities=12% Similarity=0.127 Sum_probs=159.6
Q ss_pred EEEEECC-CCCEEEEEECCCcEEEEECCCceeEeecC--C------------CCCEEEEEecCCCCEEEEe-cCCCeEEE
Q 010759 217 TTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSK--H------------KGPIFSLKWNKKGDYLLTG-SCDKTAIV 280 (502)
Q Consensus 217 ~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~--h------------~~~V~~l~~~~~~~~l~sg-s~D~~v~i 280 (502)
..+++++ ++.++++-+.++.|++|+..+.....+.+ . -....++++.++++.|+.+ ...+.|++
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n~~Ir~ 650 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGLRDGSFEDATFNRPQGLAYNAKKNLLYVADTENHALRE 650 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCCCCCchhccccCCCcEEEEeCCCCEEEEEeCCCceEEE
Confidence 4578876 46677777788899999988765544432 1 1124788899888866554 44567888
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCc--ceeeecCCCcceeEEEEcC-CCCEEEEEeC
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDP-TGSLLASCSD 357 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~ 357 (502)
+|+.++. +.++.... ..+. +...+. .... -.....++++| ++.++++.+.
T Consensus 651 id~~~~~-V~tlag~G------------------~~g~----~~~gg~~~~~~~----ln~P~gVa~dp~~g~LyVad~~ 703 (1057)
T PLN02919 651 IDFVNET-VRTLAGNG------------------TKGS----DYQGGKKGTSQV----LNSPWDVCFEPVNEKVYIAMAG 703 (1057)
T ss_pred EecCCCE-EEEEeccC------------------cccC----CCCCChhhhHhh----cCCCeEEEEecCCCeEEEEECC
Confidence 8886653 22221100 0000 000000 0000 01234789999 5677788888
Q ss_pred CCcEEEEeCCCCceeeecccC---------------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010759 358 DVTAKIWNMKQDKYVHDLREH---------------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 422 (502)
Q Consensus 358 dg~i~iwd~~~~~~~~~~~~~---------------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 422 (502)
++.|++||..++... .+.+. -.....++++|++. .++++-+.++.|++||+.++..
T Consensus 704 ~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~--------~LYVADs~n~~Irv~D~~tg~~ 774 (1057)
T PLN02919 704 QHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLK--------ELYIADSESSSIRALDLKTGGS 774 (1057)
T ss_pred CCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCC--------EEEEEECCCCeEEEEECCCCcE
Confidence 999999998766432 11110 11234577777764 3555667789999999987653
Q ss_pred EEEeeC-------------C--------CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cC---------
Q 010759 423 LYSLNG-------------H--------REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-GN--------- 471 (502)
Q Consensus 423 ~~~~~~-------------h--------~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~--------- 471 (502)
.....+ + ...-..++|+++|.++++-+.+++|++||..++.+..... +.
T Consensus 775 ~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~dG~~~ 854 (1057)
T PLN02919 775 RLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLAGTGKAGFKDGKAL 854 (1057)
T ss_pred EEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEeccCCcCCCCCccc
Confidence 221100 0 1123689999999999999999999999998877653321 10
Q ss_pred ----CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 472 ----GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 472 ----~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
....+++++++|+.+++-+.|++|++||++
T Consensus 855 ~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~ 888 (1057)
T PLN02919 855 KAQLSEPAGLALGENGRLFVADTNNSLIRYLDLN 888 (1057)
T ss_pred ccccCCceEEEEeCCCCEEEEECCCCEEEEEECC
Confidence 135789999999999999999999999974
No 269
>KOG4547 consensus WD40 repeat-containing protein [General function prediction only]
Probab=99.23 E-value=1.9e-09 Score=103.89 Aligned_cols=189 Identities=19% Similarity=0.273 Sum_probs=137.5
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE--------------------C
Q 010759 163 SPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW--------------------N 222 (502)
Q Consensus 163 spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~--------------------s 222 (502)
.|-+.++|....||.+|||+...++.....+.. .+ -++.-++..| +
T Consensus 2 ~~~~~~~A~~~~~g~l~iw~t~~~~~~~e~~p~-------~~-------~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s 67 (541)
T KOG4547|consen 2 PPALDYFALSTGDGRLRIWDTAKNQLQQEFAPI-------AS-------LSGTCTYTKWGLSADYSPMKWLSLEKAKKAS 67 (541)
T ss_pred CchhheEeecCCCCeEEEEEccCceeeeeeccc-------hh-------ccCcceeEEEEEEeccchHHHHhHHHHhhcc
Confidence 345679999999999999998765432111100 00 0111122222 3
Q ss_pred CCCCEEEEEECCCcEEEEECCC-ceeEee--cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 223 GEGTLLATGSYDGQARIWSTNG-DLKCTL--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~-~~~~~~--~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
.+-.+++-|...|.|.++++.+ ++...+ .+|.+.|.++.++.+-..|.|++.|+.+..|+...+.....+......+
T Consensus 68 ~~t~~lvlgt~~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~ 147 (541)
T KOG4547|consen 68 LDTSMLVLGTPQGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLV 147 (541)
T ss_pred CCceEEEeecCCccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCcc
Confidence 4556788899999999999765 444444 4799999999999999999999999999999999998888888777767
Q ss_pred EEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-----CCEEEEE-eCCCcEEEEeCC
Q 010759 300 LDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-----GSLLASC-SDDVTAKIWNMK 367 (502)
Q Consensus 300 ~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----~~~l~sg-s~dg~i~iwd~~ 367 (502)
.++...++ ..++++ .+.|.+|++.+.+.+..|.||.++|.++.|--+ |.+|.++ ..+.-|.+|-..
T Consensus 148 ~sl~is~D~~~l~~a--s~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~~~g~~G~~vLssa~~~r~i~~w~v~ 220 (541)
T KOG4547|consen 148 SSLCISPDGKILLTA--SRQIKVLDIETKEVVITFTGHGSPVRTLSFTTLIDGIIGKYVLSSAAAERGITVWVVE 220 (541)
T ss_pred ceEEEcCCCCEEEec--cceEEEEEccCceEEEEecCCCcceEEEEEEEeccccccceeeeccccccceeEEEEE
Confidence 66666554 233333 468999999999999999999999999999776 6665544 445567778553
No 270
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=9.7e-11 Score=111.40 Aligned_cols=290 Identities=16% Similarity=0.260 Sum_probs=186.6
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCC-CCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGT-SNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
...+.||+..|++++--.+.+-++++|.|.+|++|.+.... ..++ ..+.-.+..|.++|.++.|-.+-
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~t-----------saCQfTY~aHkk~i~~igfL~~l 796 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGT-----------SACQFTYQAHKKPIHDIGFLADL 796 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCcccc-----------ceeeeEhhhccCcccceeeeecc
Confidence 44678999999999877788889999999999999985321 1111 01223455678899999999988
Q ss_pred CEEEEEECCCcEEEEECC-CceeEee--cCCCCCEEEEEecC--CCCEEEEe-cCCCeEEEEeccCcceeEEeeecccCe
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTL--SKHKGPIFSLKWNK--KGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~--~~h~~~V~~l~~~~--~~~~l~sg-s~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+++++ .||.|.+||.- +...... ....+.+..+..-+ +...+++| +...+|+++|.+..+|...+....
T Consensus 797 r~i~S--cD~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcn--- 871 (1034)
T KOG4190|consen 797 RSIAS--CDGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCN--- 871 (1034)
T ss_pred ceeee--ccCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEecc---
Confidence 88765 57999999952 2222211 11122333333333 33444444 788999999999988876654211
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
-.+..+.+.+++..+.|+.++.+-.+|.|.+.|.++++.+...+...
T Consensus 872 ---------------------------------a~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vINswrpme 918 (1034)
T KOG4190|consen 872 ---------------------------------APGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVINSWRPME 918 (1034)
T ss_pred ---------------------------------CCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceeccCCccc
Confidence 12334567889999999999999999999999999999887766443
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEE-EeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKL-WDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~i-wd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.....++- |... .|+....|.++.+ |....+...+..+.-..+..-+ -.-|.-|+++.....+.+|-
T Consensus 919 cdllqlaa-psdq---------~L~~saldHslaVnWhaldgimh~q~kpppepahfl--qsvgpSLV~a~~Gn~lgVYa 986 (1034)
T KOG4190|consen 919 CDLLQLAA-PSDQ---------ALAQSALDHSLAVNWHALDGIMHLQDKPPPEPAHFL--QSVGPSLVTAQNGNILGVYA 986 (1034)
T ss_pred chhhhhcC-chhH---------HHHhhcccceeEeeehhcCCeeeeccCCCCcchhhh--hccCceeEEeccCcEEEEEe
Confidence 33333321 2221 4566667888888 8877777666655332222111 12356677777666777774
Q ss_pred CCCC-e------eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 459 LKEG-K------IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 459 ~~~~-~------~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
-... . .++.-+-.+..++++--|-..-+.+|...|.|.+
T Consensus 987 d~a~~ha~stitKiR~d~f~G~lTala~LPLN~afLaGne~G~IaL 1032 (1034)
T KOG4190|consen 987 DSAELHAESTITKIRPDEFPGTLTALAPLPLNCAFLAGNEHGAIAL 1032 (1034)
T ss_pred cchhhhhhhhhccccccccCCccceeeeccccchhhccCCCCceee
Confidence 2211 0 1111112345677887887777778888887765
No 271
>COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only]
Probab=99.21 E-value=5.1e-09 Score=99.20 Aligned_cols=263 Identities=15% Similarity=0.217 Sum_probs=160.0
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCC---------------
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--------------- 276 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~--------------- 276 (502)
..-++..++|||.|.+|++... ..|.+|.....-.+.-..| ..|+-+.|+|.+.||.+=+...
T Consensus 31 ~~~p~~~~~~SP~G~~l~~~~~-~~V~~~~g~~~~~l~~~~~-~~V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n 108 (561)
T COG5354 31 ENWPVAYVSESPLGTYLFSEHA-AGVECWGGPSKAKLVRFRH-PDVKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKN 108 (561)
T ss_pred cCcchhheeecCcchheehhhc-cceEEccccchhheeeeec-CCceecccCcccceeeeeccCCccChhhccCCccccC
Confidence 3557889999999999998766 4588897654323222234 4689999999999999876543
Q ss_pred eEEEEeccCcceeEEeeecccCe--E-EEecCCCceEEEEcCCCeEEEEEcCCCc---ceeeecCCCcceeEEEEcCCCC
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGPT--L-DVDWRNNVSFATSSTDNMIYVCKIGENR---PIKTFAGHQGEVNCVKWDPTGS 350 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~~--~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~---~~~~~~~h~~~v~~v~~~p~~~ 350 (502)
.+.+||+.++.++..+.....+. - -+.|..+..+++--....++++++..+- +...++ ...|....|+|-++
T Consensus 109 ~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~sl~i~e~t~n~~~~p~~~lr--~~gi~dFsisP~~n 186 (561)
T COG5354 109 NVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSSLYIHEITDNIEEHPFKNLR--PVGILDFSISPEGN 186 (561)
T ss_pred ceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCeEEEEecCCccccCchhhcc--ccceeeEEecCCCC
Confidence 48999999999888877665541 1 2334332222222233456777752221 122221 23567778888643
Q ss_pred --EEE-----EEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE---------eCCCeEEE
Q 010759 351 --LLA-----SCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA---------SFDSTVKL 414 (502)
Q Consensus 351 --~l~-----sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg---------s~dg~i~i 414 (502)
.|| ....+++++||.+..+..+.+.....-.-..+.|.+.|.. +++.+- -...++.|
T Consensus 187 ~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~qLkW~~~g~~-------ll~l~~t~~ksnKsyfgesnLyl 259 (561)
T COG5354 187 HDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGVQLKWQVLGKY-------LLVLVMTHTKSNKSYFGESNLYL 259 (561)
T ss_pred CceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeecccEEEEecCCce-------EEEEEEEeeecccceeccceEEE
Confidence 233 2456788999998866655432222223356778877752 111110 01356788
Q ss_pred EeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE--eCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEE
Q 010759 415 WDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG--SLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAA 488 (502)
Q Consensus 415 wd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg--s~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~ 488 (502)
+++....+.... ...++|.+.+|.|.++-+++. -.+..+.+++++.. +...+ ..+.=..+-|||.++++..
T Consensus 260 ~~~~e~~i~V~~-~~~~pVhdf~W~p~S~~F~vi~g~~pa~~s~~~lr~N-l~~~~-Pe~~rNT~~fsp~~r~il~ 332 (561)
T COG5354 260 LRITERSIPVEK-DLKDPVHDFTWEPLSSRFAVISGYMPASVSVFDLRGN-LRFYF-PEQKRNTIFFSPHERYILF 332 (561)
T ss_pred Eeecccccceec-cccccceeeeecccCCceeEEecccccceeecccccc-eEEec-CCcccccccccCcccEEEE
Confidence 887743333222 567899999999998766554 46888999998754 33322 2222334455666555444
No 272
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.20 E-value=2.2e-08 Score=109.72 Aligned_cols=266 Identities=11% Similarity=0.104 Sum_probs=159.6
Q ss_pred eEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecc-cccCCCCeEEEEECCCCCEEEEEE-CC
Q 010759 158 CACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGR-TNEKSKDVTTLDWNGEGTLLATGS-YD 234 (502)
Q Consensus 158 ~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V~~l~~s~~~~~l~sg~-~d 234 (502)
..+++++. +.++++-+..+.|++||............+.... ..+. ....-..-..+++.+++..|+.+. ..
T Consensus 571 ~gvavd~~~g~lyVaDs~n~rI~v~d~~G~~i~~ig~~g~~G~-----~dG~~~~a~f~~P~GIavd~~gn~LYVaDt~n 645 (1057)
T PLN02919 571 GKLAIDLLNNRLFISDSNHNRIVVTDLDGNFIVQIGSTGEEGL-----RDGSFEDATFNRPQGLAYNAKKNLLYVADTEN 645 (1057)
T ss_pred ceEEEECCCCeEEEEECCCCeEEEEeCCCCEEEEEccCCCcCC-----CCCchhccccCCCcEEEEeCCCCEEEEEeCCC
Confidence 46788875 6677777888999999975321100000000000 0000 000112357889999888666654 45
Q ss_pred CcEEEEECCCceeEeecCC-----------------CCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 235 GQARIWSTNGDLKCTLSKH-----------------KGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h-----------------~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+.|++++..+....++.+- -..-+.++|+| ++..+++.+.++.|++||..++... .+..
T Consensus 646 ~~Ir~id~~~~~V~tlag~G~~g~~~~gg~~~~~~~ln~P~gVa~dp~~g~LyVad~~~~~I~v~d~~~g~v~-~~~G-- 722 (1057)
T PLN02919 646 HALREIDFVNETVRTLAGNGTKGSDYQGGKKGTSQVLNSPWDVCFEPVNEKVYIAMAGQHQIWEYNISDGVTR-VFSG-- 722 (1057)
T ss_pred ceEEEEecCCCEEEEEeccCcccCCCCCChhhhHhhcCCCeEEEEecCCCeEEEEECCCCeEEEEECCCCeEE-EEec--
Confidence 6789998776555444221 01236799999 5566677788899999998765431 1111
Q ss_pred cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeec
Q 010759 297 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
++.....+ .... ....-.....++++|++. ++++-+.++.|++||+.++......
T Consensus 723 -------------------~G~~~~~~--g~~~---~~~~~~~P~GIavspdG~~LYVADs~n~~Irv~D~~tg~~~~~~ 778 (1057)
T PLN02919 723 -------------------DGYERNLN--GSSG---TSTSFAQPSGISLSPDLKELYIADSESSSIRALDLKTGGSRLLA 778 (1057)
T ss_pred -------------------CCccccCC--CCcc---ccccccCccEEEEeCCCCEEEEEECCCCeEEEEECCCCcEEEEE
Confidence 00000000 0000 000112356799999988 5667777899999998865432100
Q ss_pred -------------ccC--------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-------
Q 010759 376 -------------REH--------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN------- 427 (502)
Q Consensus 376 -------------~~~--------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~------- 427 (502)
-.. ......++++++|. ++++-+.++.|++||..++.......
T Consensus 779 gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~---------LYVADs~N~rIrviD~~tg~v~tiaG~G~~G~~ 849 (1057)
T PLN02919 779 GGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQ---------IYVADSYNHKIKKLDPATKRVTTLAGTGKAGFK 849 (1057)
T ss_pred ecccccCcccccccCCCCchhhhhccCCceeeEeCCCc---------EEEEECCCCEEEEEECCCCeEEEEeccCCcCCC
Confidence 000 01124566666663 56677789999999998776543221
Q ss_pred ------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 428 ------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 428 ------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
+.-.....|+++++|+++++-+.+++|++|++.+++.
T Consensus 850 dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 850 DGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 1112467899999999999999999999999998865
No 273
>TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain. This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome.
Probab=99.20 E-value=3.4e-07 Score=87.05 Aligned_cols=244 Identities=11% Similarity=0.100 Sum_probs=142.4
Q ss_pred CcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecC----------CCeEEEEeccCcceeEEeeecccCe----
Q 010759 235 GQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSC----------DKTAIVWDVKTEEWKQQFEFHSGPT---- 299 (502)
Q Consensus 235 g~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~----------D~~v~iwd~~~~~~~~~~~~~~~~~---- 299 (502)
+.|.+.|.... .+.++..-..+- .+ ++|+++.|+.+.. +..|.+||+.+.+.+..+.....|-
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~-~~-~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~ 104 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPN-PV-VASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVG 104 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCc-ee-ECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhcc
Confidence 78999997654 334444333332 34 8999998887765 7899999999999888776432211
Q ss_pred ---EEEecCC--CceEEEE-cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE--------eCCCcEEEEe
Q 010759 300 ---LDVDWRN--NVSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC--------SDDVTAKIWN 365 (502)
Q Consensus 300 ---~~~~~~~--~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg--------s~dg~i~iwd 365 (502)
..+.+.. ...++.- +.++.+.+.|+...+.+..+.- |++.+++.. +.||......
T Consensus 105 ~~~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~v-----------p~~~~vy~t~e~~~~~~~~Dg~~~~v~ 173 (352)
T TIGR02658 105 TYPWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDV-----------PDCYHIFPTANDTFFMHCRDGSLAKVG 173 (352)
T ss_pred CccceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeC-----------CCCcEEEEecCCccEEEeecCceEEEE
Confidence 1222322 2233333 2377788888877776655432 333333332 2233332222
Q ss_pred CCC-Cce-eeecc-cCC--CcEEE-EEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-----eEEEEeeC-----
Q 010759 366 MKQ-DKY-VHDLR-EHS--KEIYT-IRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELG-----KLLYSLNG----- 428 (502)
Q Consensus 366 ~~~-~~~-~~~~~-~~~--~~i~~-~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-----~~~~~~~~----- 428 (502)
+.. ++. ..... .+. .++.. -.|.+ +| ..+++| ..|+|.+.|+... .....+..
T Consensus 174 ~d~~g~~~~~~~~vf~~~~~~v~~rP~~~~~dg--------~~~~vs--~eG~V~~id~~~~~~~~~~~~~~~~~~~~~~ 243 (352)
T TIGR02658 174 YGTKGNPKIKPTEVFHPEDEYLINHPAYSNKSG--------RLVWPT--YTGKIFQIDLSSGDAKFLPAIEAFTEAEKAD 243 (352)
T ss_pred ecCCCceEEeeeeeecCCccccccCCceEcCCC--------cEEEEe--cCCeEEEEecCCCcceecceeeecccccccc
Confidence 211 110 00000 000 00000 01222 33 234443 3399999996432 22222211
Q ss_pred --CCCCEEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEEEEE-CCCe
Q 010759 429 --HREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIAACF-ANHT 494 (502)
Q Consensus 429 --h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la~~~-~~~~ 494 (502)
..+.+.-++++|+++.|..+.. .+.|.++|+.+++.+..+.....+..++++|||+ +|.+.. .++.
T Consensus 244 ~wrP~g~q~ia~~~dg~~lyV~~~~~~~~thk~~~~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn~~s~~ 323 (352)
T TIGR02658 244 GWRPGGWQQVAYHRARDRIYLLADQRAKWTHKTASRFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALSTGDKT 323 (352)
T ss_pred ccCCCcceeEEEcCCCCEEEEEecCCccccccCCCCEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeCCCCCc
Confidence 1233445999999988776431 2579999999999999988777899999999999 777665 5788
Q ss_pred EEEEEee
Q 010759 495 VCVLDFR 501 (502)
Q Consensus 495 v~v~~~~ 501 (502)
|.|+|..
T Consensus 324 VsViD~~ 330 (352)
T TIGR02658 324 LYIFDAE 330 (352)
T ss_pred EEEEECc
Confidence 9999963
No 274
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=99.16 E-value=1.8e-09 Score=95.98 Aligned_cols=267 Identities=20% Similarity=0.427 Sum_probs=166.9
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCce------eEeecCCC------------CCEEEEEecCCC--CEEEEe
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHK------------GPIFSLKWNKKG--DYLLTG 272 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~------~~~~~~h~------------~~V~~l~~~~~~--~~l~sg 272 (502)
...|+++.|...|.||++|...|.|.++..+... ...|++|. ..|..+.|..++ ..|+..
T Consensus 26 ad~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hFLls 105 (460)
T COG5170 26 ADKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHFLLS 105 (460)
T ss_pred cceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceEEEe
Confidence 3568999999999999999999999999754322 22356664 246778887655 357777
Q ss_pred cCCCeEEEEeccCcceeEEe------eec---ccCeEEEecCCCceEE-EEcCCCeEEEEEcCCCcceeee-cCCCccee
Q 010759 273 SCDKTAIVWDVKTEEWKQQF------EFH---SGPTLDVDWRNNVSFA-TSSTDNMIYVCKIGENRPIKTF-AGHQGEVN 341 (502)
Q Consensus 273 s~D~~v~iwd~~~~~~~~~~------~~~---~~~~~~~~~~~~~~~~-~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~ 341 (502)
+.|++|++|-+........- .+| .+++.+.. ...+- .+.-|..|. ..|.+.+ ..|...|+
T Consensus 106 tNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~---~l~lprls~hd~iia------a~p~rvyaNaH~yhiN 176 (460)
T COG5170 106 TNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTK---ELLLPRLSEHDEIIA------AKPCRVYANAHPYHIN 176 (460)
T ss_pred cCCceeeeeeeecccchhhhccccccccccccCCCcCCHH---HhhcccccccceEEE------eccceeccccceeEee
Confidence 89999999988655321110 001 11111110 00000 000111111 1233344 46888899
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCc---eeeecccC-----CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 342 CVKWDPTGSLLASCSDDVTAKIWNMKQDK---YVHDLREH-----SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg~i~iwd~~~~~---~~~~~~~~-----~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
++.|..|...++++ +|=.|.+|++.-.. .+..++.| ...|++..|+|... +++...+..|.|+
T Consensus 177 SiS~NsD~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~c--------n~fmYSsSkG~Ik 247 (460)
T COG5170 177 SISFNSDKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMC--------NVFMYSSSKGEIK 247 (460)
T ss_pred eeeecCchheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHc--------ceEEEecCCCcEE
Confidence 99999998887765 67789999875321 12222222 23456666766543 4566677889999
Q ss_pred EEeCCCCe------EEEE--ee--------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC-eeEEEEec------
Q 010759 414 LWDVELGK------LLYS--LN--------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG-KIVKTYTG------ 470 (502)
Q Consensus 414 iwd~~~~~------~~~~--~~--------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~-~~~~~~~~------ 470 (502)
+-|++... .++. +. +-...|.++.|+++|+|+++-+. -+|+|||++.. ..+++.+-
T Consensus 248 l~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsRdy-ltvkiwDvnm~k~pikTi~~h~~l~~ 326 (460)
T COG5170 248 LNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSRDY-LTVKIWDVNMAKNPIKTIPMHCDLMD 326 (460)
T ss_pred ehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEecc-ceEEEEecccccCCceeechHHHHHH
Confidence 99998322 1221 11 12346888999999999987654 47999999764 34565532
Q ss_pred -------CCCE---EEEEECCCCCEEEEEECCCeEEEE
Q 010759 471 -------NGGI---FEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 471 -------~~~i---~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
+..| +.+.||.|.+++.+|+.+...-+|
T Consensus 327 ~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiy 364 (460)
T COG5170 327 ELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIY 364 (460)
T ss_pred HHHhhhhccceeeeEEEEecCCcccccccccccceeee
Confidence 2234 468999999999999887655444
No 275
>KOG4190 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.14 E-value=1.5e-10 Score=110.07 Aligned_cols=210 Identities=20% Similarity=0.341 Sum_probs=152.9
Q ss_pred eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC-------cceeEEeeecccCeEEEecCCCceEEEEcCCCeE
Q 010759 247 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMI 319 (502)
Q Consensus 247 ~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 319 (502)
.+.+.+|+..|..+.--.+.+-|+++|.|++|++|.++. ..+.-+|..|..++.++.|..+.+.+. +.|+.|
T Consensus 728 L~nf~GH~~~iRai~AidNENSFiSASkDKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~-ScD~gi 806 (1034)
T KOG4190|consen 728 LCNFTGHQEKIRAIAAIDNENSFISASKDKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIA-SCDGGI 806 (1034)
T ss_pred eecccCcHHHhHHHHhcccccceeeccCCceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceee-eccCcc
Confidence 457889999998887777788999999999999998763 336667888999999998876655443 557889
Q ss_pred EEEEcCCCcceeeec--CCCcceeEEEEcC--CCCE-EEEEeCCCcEEEEeCCCCceeeeccc-----CCCcEEEEEEcc
Q 010759 320 YVCKIGENRPIKTFA--GHQGEVNCVKWDP--TGSL-LASCSDDVTAKIWNMKQDKYVHDLRE-----HSKEIYTIRWSP 389 (502)
Q Consensus 320 ~~~~~~~~~~~~~~~--~h~~~v~~v~~~p--~~~~-l~sgs~dg~i~iwd~~~~~~~~~~~~-----~~~~i~~~~~sp 389 (502)
.+||--.++++.... ...+.+..+..-+ +..+ ++.|+...+++++|.+....+.+++. ....+.+++..|
T Consensus 807 HlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~ 886 (1034)
T KOG4190|consen 807 HLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVAD 886 (1034)
T ss_pred eeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEecc
Confidence 999976666544221 1122233333333 3333 45558899999999999888777654 345578888888
Q ss_pred CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEE-EeCCCCeeEEE
Q 010759 390 TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHI-WSLKEGKIVKT 467 (502)
Q Consensus 390 ~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~i-w~~~~~~~~~~ 467 (502)
.|. .++.|-..|+|.+.|.++|+.+...+.-.-....++ .|..+.|+....|.++.+ |...+|.+.-+
T Consensus 887 ~GN---------~lAa~LSnGci~~LDaR~G~vINswrpmecdllqla-apsdq~L~~saldHslaVnWhaldgimh~q 955 (1034)
T KOG4190|consen 887 KGN---------KLAAALSNGCIAILDARNGKVINSWRPMECDLLQLA-APSDQALAQSALDHSLAVNWHALDGIMHLQ 955 (1034)
T ss_pred Ccc---------hhhHHhcCCcEEEEecCCCceeccCCcccchhhhhc-CchhHHHHhhcccceeEeeehhcCCeeeec
Confidence 885 678888899999999999998876654333333344 477889998888999999 98877765443
No 276
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.13 E-value=6.7e-07 Score=82.00 Aligned_cols=259 Identities=15% Similarity=0.198 Sum_probs=163.8
Q ss_pred CCcEEEEECCCc----eeEeecCCCCCEEEEEecCCCCEEEEecCC---CeEEEEecc--Cccee--EEeeecccCeEEE
Q 010759 234 DGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KTAIVWDVK--TEEWK--QQFEFHSGPTLDV 302 (502)
Q Consensus 234 dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~v~iwd~~--~~~~~--~~~~~~~~~~~~~ 302 (502)
+..|++|++... ....+..+.+..+-|+|+|++++|+++-.+ |.|..|.+. .|.+. ........+..-+
T Consensus 15 s~gI~v~~ld~~~g~l~~~~~v~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~Lt~ln~~~~~g~~p~yv 94 (346)
T COG2706 15 SQGIYVFNLDTKTGELSLLQLVAELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGRLTFLNRQTLPGSPPCYV 94 (346)
T ss_pred CCceEEEEEeCcccccchhhhccccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCeEEEeeccccCCCCCeEE
Confidence 478999987632 112334566777899999999999988665 666666554 35432 2222223333445
Q ss_pred ecCCCce--EEEEcCCCeEEEEEcCCCcc---eeeecCCCcc----------eeEEEEcCCCCEEEEEeC-CCcEEEEeC
Q 010759 303 DWRNNVS--FATSSTDNMIYVCKIGENRP---IKTFAGHQGE----------VNCVKWDPTGSLLASCSD-DVTAKIWNM 366 (502)
Q Consensus 303 ~~~~~~~--~~~~~~d~~i~~~~~~~~~~---~~~~~~h~~~----------v~~v~~~p~~~~l~sgs~-dg~i~iwd~ 366 (502)
+...+.+ |.+.-..+.|.++.++.... ......|.+. +.+..+.|++++|+++.. --.|.+|++
T Consensus 95 svd~~g~~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~ 174 (346)
T COG2706 95 SVDEDGRFVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDL 174 (346)
T ss_pred EECCCCCEEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEc
Confidence 5544443 34445568889988865322 1122234444 778999999999988764 236899999
Q ss_pred CCCceeeec---ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--e--EEEEeeC------CCCCE
Q 010759 367 KQDKYVHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--K--LLYSLNG------HREPV 433 (502)
Q Consensus 367 ~~~~~~~~~---~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--~--~~~~~~~------h~~~v 433 (502)
..+++...- ......-..|.|+|+++ +.-+..=-+++|-+|..... + .++.+.. -....
T Consensus 175 ~dg~L~~~~~~~v~~G~GPRHi~FHpn~k--------~aY~v~EL~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~ 246 (346)
T COG2706 175 DDGKLTPADPAEVKPGAGPRHIVFHPNGK--------YAYLVNELNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWA 246 (346)
T ss_pred ccCccccccccccCCCCCcceEEEcCCCc--------EEEEEeccCCEEEEEEEcCCCceEEEeeeeccCccccCCCCce
Confidence 876543211 12334457788988886 23334556899999998763 2 2222211 12356
Q ss_pred EEEEECCCCCEEEEEeC-CCcEEEEeCCC--Cee--EEEEecCCC-EEEEEECCCCCEEEEEECC-CeEEEEEe
Q 010759 434 YSLAFSPTGEYLASGSL-DKSMHIWSLKE--GKI--VKTYTGNGG-IFEVCWNKEGDKIAACFAN-HTVCVLDF 500 (502)
Q Consensus 434 ~~l~~spdg~~lasgs~-Dg~i~iw~~~~--~~~--~~~~~~~~~-i~~~~ws~~g~~la~~~~~-~~v~v~~~ 500 (502)
-+|..+|||+||.++.. ...|-+|.+.. |++ +.....++. ..++.++|.|++|+++..+ ..|.||-+
T Consensus 247 aaIhis~dGrFLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~ 320 (346)
T COG2706 247 AAIHISPDGRFLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFER 320 (346)
T ss_pred eEEEECCCCCEEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEE
Confidence 78899999999988753 34788888754 433 223333443 6789999999999988775 46777754
No 277
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=99.11 E-value=1.2e-09 Score=107.58 Aligned_cols=291 Identities=20% Similarity=0.343 Sum_probs=181.2
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC--CEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG--TLLATG 231 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~--~~l~sg 231 (502)
.+++.++..+|.|+-+|.++.-|.+ +-|+...-. .| ..+.+. ..-.|-.+.|++.. .+-++.
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl~-i~dld~p~~------pp---r~l~h~------tpw~vad~qws~h~a~~~wiVs 87 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGLY-IIDLDDPFT------PP---RWLHHI------TPWQVADVQWSPHPAKPYWIVS 87 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCeE-EEeccCCCC------Cc---eeeecc------CcchhcceecccCCCCceeEEe
Confidence 4568899999999999998876643 445543210 00 011111 12246667777653 333444
Q ss_pred ECCCcEEEEECC----CceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcce-eEEeeecccCeEEEecC
Q 010759 232 SYDGQARIWSTN----GDLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEW-KQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 232 ~~dg~i~iw~~~----~~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~ 305 (502)
.......+|++. ......+.+|+.+|+.+.|+|+. ..+++++.|-.+..||+++... .-.+.........+.|.
T Consensus 88 ts~qkaiiwnlA~ss~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwn 167 (1081)
T KOG0309|consen 88 TSNQKAIIWNLAKSSSNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWN 167 (1081)
T ss_pred cCcchhhhhhhhcCCccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeec
Confidence 444566688853 23445678999999999999976 4688999999999999987542 22222222233344553
Q ss_pred C-CceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCcee-eecccCCCc
Q 010759 306 N-NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYV-HDLREHSKE 381 (502)
Q Consensus 306 ~-~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~~~~~ 381 (502)
. +..+.+++-.+-|++|+.+.+ .|+..+++|...|+.++|..- ...+.+++.||++++||....... ........+
T Consensus 168 yk~p~vlasshg~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~p 247 (1081)
T KOG0309|consen 168 YKDPNVLASSHGNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFP 247 (1081)
T ss_pred ccCcchhhhccCCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCc
Confidence 2 222334455677999998764 577788999999999998753 346789999999999997643211 111223456
Q ss_pred EEEEEEccCCCCCCC-C--CCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCC----------CEEEE
Q 010759 382 IYTIRWSPTGSGTNN-P--NQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTG----------EYLAS 447 (502)
Q Consensus 382 i~~~~~sp~g~~~~~-~--~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg----------~~las 447 (502)
|..-++-|-|.+... | ...++.. --.++....|+..+ .++++++.||.+.|...-|...+ -.|+|
T Consensus 248 iw~~r~~Pfg~g~~~mp~~G~n~v~~-~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVT 326 (1081)
T KOG0309|consen 248 IWRGRYLPFGEGYCIMPMVGGNMVPQ-LRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVT 326 (1081)
T ss_pred ceeccccccCceeEeccccCCeeeee-ccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEE
Confidence 666677776653210 0 0000000 01122233344332 36789999999988776665422 25999
Q ss_pred EeCCCcEEEEeCCC
Q 010759 448 GSLDKSMHIWSLKE 461 (502)
Q Consensus 448 gs~Dg~i~iw~~~~ 461 (502)
-|.|.++++|-+.+
T Consensus 327 WSkD~~lrlWpI~~ 340 (1081)
T KOG0309|consen 327 WSKDQTLRLWPIDS 340 (1081)
T ss_pred eecCCceEeeeccH
Confidence 99999999998764
No 278
>PRK04043 tolB translocation protein TolB; Provisional
Probab=99.09 E-value=1.7e-07 Score=92.75 Aligned_cols=201 Identities=13% Similarity=0.071 Sum_probs=119.9
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCE-EEEecC---CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDY-LLTGSC---DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~---D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
.|.+-|..+.....+.... .+....|+|+|+. ++..+. ...|.++|+.+++....
T Consensus 170 ~l~~~d~dg~~~~~~~~~~-~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~l-------------------- 228 (419)
T PRK04043 170 NIVLADYTLTYQKVIVKGG-LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKI-------------------- 228 (419)
T ss_pred eEEEECCCCCceeEEccCC-CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEE--------------------
Confidence 4444455554444343333 7788999999985 553333 24577777766542211
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCC--CcEEEEeCCCCceeeecccCCCcEEEEEEc
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDD--VTAKIWNMKQDKYVHDLREHSKEIYTIRWS 388 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~d--g~i~iwd~~~~~~~~~~~~~~~~i~~~~~s 388 (502)
....+......|+|||+.++ +.+.+ ..|.++++.++... .+..+........|+
T Consensus 229 ----------------------t~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~~-~LT~~~~~d~~p~~S 285 (419)
T PRK04043 229 ----------------------ASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTLT-QITNYPGIDVNGNFV 285 (419)
T ss_pred ----------------------ecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCcEE-EcccCCCccCccEEC
Confidence 11223344577999998665 34334 45777788776543 333333333456799
Q ss_pred cCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---------CcEEEE
Q 010759 389 PTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---------KSMHIW 457 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---------g~i~iw 457 (502)
|+|. .++++....+ .|.+.|+..++...... ... ....|||||++|+..+.. ..|.+.
T Consensus 286 PDG~--------~I~F~Sdr~g~~~Iy~~dl~~g~~~rlt~-~g~--~~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~ 354 (419)
T PRK04043 286 EDDK--------RIVFVSDRLGYPNIFMKKLNSGSVEQVVF-HGK--NNSSVSTYKNYIVYSSRETNNEFGKNTFNLYLI 354 (419)
T ss_pred CCCC--------EEEEEECCCCCceEEEEECCCCCeEeCcc-CCC--cCceECCCCCEEEEEEcCCCcccCCCCcEEEEE
Confidence 9986 2344443333 57788888776533221 111 224899999998866543 368888
Q ss_pred eCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 458 SLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 458 ~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
++.++... .++..+......|+|||+.|+.....
T Consensus 355 d~~~g~~~-~LT~~~~~~~p~~SPDG~~I~f~~~~ 388 (419)
T PRK04043 355 STNSDYIR-RLTANGVNQFPRFSSDGGSIMFIKYL 388 (419)
T ss_pred ECCCCCeE-ECCCCCCcCCeEECCCCCEEEEEEcc
Confidence 88877653 33333333468999999988877654
No 279
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=99.08 E-value=1.2e-07 Score=93.72 Aligned_cols=259 Identities=10% Similarity=0.058 Sum_probs=157.0
Q ss_pred CCEEEEEECCCcEEEEEC-CCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 225 GTLLATGSYDGQARIWST-NGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+..++.++.+|.+..+|. .++....+.-......+.. .++..++.++.++.+..+|..+++.+-....... +....
T Consensus 65 ~~~v~v~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~p~--v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~-~~~~p 141 (377)
T TIGR03300 65 GGKVYAADADGTVVALDAETGKRLWRVDLDERLSGGVG--ADGGLVFVGTEKGEVIALDAEDGKELWRAKLSSE-VLSPP 141 (377)
T ss_pred CCEEEEECCCCeEEEEEccCCcEeeeecCCCCcccceE--EcCCEEEEEcCCCEEEEEECCCCcEeeeeccCce-eecCC
Confidence 567888888999999995 4555544332221111222 2467888999999999999999987655433221 11110
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce-----eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-----NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 378 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 378 (502)
...+..++....++.++.++..+++.+-.+......+ .+.... +..++.+..++.+..+|..+++.+-.....
T Consensus 142 ~v~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~~~~~sp~~~--~~~v~~~~~~g~v~ald~~tG~~~W~~~~~ 219 (377)
T TIGR03300 142 LVANGLVVVRTNDGRLTALDAATGERLWTYSRVTPALTLRGSASPVIA--DGGVLVGFAGGKLVALDLQTGQPLWEQRVA 219 (377)
T ss_pred EEECCEEEEECCCCeEEEEEcCCCceeeEEccCCCceeecCCCCCEEE--CCEEEEECCCCEEEEEEccCCCEeeeeccc
Confidence 1123345566778999999988777654443222111 111111 246778888899999999888765432211
Q ss_pred CC----cE---EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 379 SK----EI---YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 379 ~~----~i---~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
.. .+ ..+.-+|. . ... .+..++.+|.++.||..+|+.++..... ...... .++..|..++.|
T Consensus 220 ~~~g~~~~~~~~~~~~~p~----~--~~~-~vy~~~~~g~l~a~d~~tG~~~W~~~~~--~~~~p~--~~~~~vyv~~~~ 288 (377)
T TIGR03300 220 LPKGRTELERLVDVDGDPV----V--DGG-QVYAVSYQGRVAALDLRSGRVLWKRDAS--SYQGPA--VDDNRLYVTDAD 288 (377)
T ss_pred cCCCCCchhhhhccCCccE----E--ECC-EEEEEEcCCEEEEEECCCCcEEEeeccC--CccCce--EeCCEEEEECCC
Confidence 00 00 00000010 0 011 4556778999999999999988876521 112222 246678888899
Q ss_pred CcEEEEeCCCCeeEEEEec-CCC-EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 452 KSMHIWSLKEGKIVKTYTG-NGG-IFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~-~~~-i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|.|..+|..+|+.+..+.. ... ..+... .|.+|.++..+|.|+++|.+
T Consensus 289 G~l~~~d~~tG~~~W~~~~~~~~~~ssp~i--~g~~l~~~~~~G~l~~~d~~ 338 (377)
T TIGR03300 289 GVVVALDRRSGSELWKNDELKYRQLTAPAV--VGGYLVVGDFEGYLHWLSRE 338 (377)
T ss_pred CeEEEEECCCCcEEEccccccCCccccCEE--ECCEEEEEeCCCEEEEEECC
Confidence 9999999999998766532 121 122222 46788899999999998853
No 280
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=99.05 E-value=9.4e-09 Score=95.94 Aligned_cols=267 Identities=16% Similarity=0.271 Sum_probs=183.8
Q ss_pred ECCCCCEEEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcceeEEeeec
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~~~~~~ 295 (502)
+-...+++.+++.||.++.|.... .....+..|.+.|.+++.+-++-.+.|.+. |..++++|+..-....-+...
T Consensus 16 ~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~DminmiKL~ 95 (558)
T KOG0882|consen 16 FPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFDMINMIKLV 95 (558)
T ss_pred eeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccchhhhcccc
Confidence 344568999999999999997654 223345678888999999999999999777 999999998765544322211
Q ss_pred ccCeEEEecC--CC---ceE-EEEcCCCeEEEEEcCCCc-ceeee-cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 296 SGPTLDVDWR--NN---VSF-ATSSTDNMIYVCKIGENR-PIKTF-AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 296 ~~~~~~~~~~--~~---~~~-~~~~~d~~i~~~~~~~~~-~~~~~-~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
--| -.+.|. .+ ..+ ++.-.++.+.++|-.... +...+ .-|..+|.++.++|.+..+++....|.|..|...
T Consensus 96 ~lP-g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e 174 (558)
T KOG0882|consen 96 DLP-GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAE 174 (558)
T ss_pred cCC-CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCC
Confidence 111 112221 11 122 334567888888866543 33333 3588999999999999999999999999999876
Q ss_pred C------Ccee---------eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-----
Q 010759 368 Q------DKYV---------HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN----- 427 (502)
Q Consensus 368 ~------~~~~---------~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~----- 427 (502)
. .+.. ..+........++.|+|++. .+++-+.|..|++++..+|+.++.+.
T Consensus 175 ~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~---------qistl~~DrkVR~F~~KtGklvqeiDE~~t~ 245 (558)
T KOG0882|consen 175 GPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGA---------QISTLNPDRKVRGFVFKTGKLVQEIDEVLTD 245 (558)
T ss_pred CcccCccccccccccccchhhcccccccCccceEEccccC---------cccccCcccEEEEEEeccchhhhhhhccchh
Confidence 3 1111 11222334567889999986 56777799999999999887654432
Q ss_pred ---------------------------CCC-CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE-----
Q 010759 428 ---------------------------GHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI----- 474 (502)
Q Consensus 428 ---------------------------~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i----- 474 (502)
.|. ..-+.+.|...|++|+-|+.=| |++.++.++.+++.+-....+
T Consensus 246 ~~~q~ks~y~l~~VelgRRmaverelek~~~~~~~~~~fdes~~flly~t~~g-ikvin~~tn~v~ri~gk~e~ir~~~~ 324 (558)
T KOG0882|consen 246 AQYQPKSPYGLMHVELGRRMAVERELEKHGSTVGTNAVFDESGNFLLYGTILG-IKVINLDTNTVVRILGKDEAIRFTRL 324 (558)
T ss_pred hhhccccccccceeehhhhhhHHhhHhhhcCcccceeEEcCCCCEEEeeccee-EEEEEeecCeEEEEeccchhhhhhhH
Confidence 111 2346688999999999888776 999999999887776321110
Q ss_pred ---------------------EEEEECCCCCEEEEEECCCeEEEE
Q 010759 475 ---------------------FEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 475 ---------------------~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
..+.+.+|-..++++.....+++|
T Consensus 325 sl~q~~~k~~~~~~~~~a~~np~~~~~~dpt~~c~a~kk~rfylf 369 (558)
T KOG0882|consen 325 SLYQGAQKSNLAALEVAASNNPLLEFQKDPTIVCTAFKKNRFYLF 369 (558)
T ss_pred HHHhhhhhccchhhhhhhccCcccccCCCCeEEEeeeecceEEEE
Confidence 124467777788888877777665
No 281
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=99.05 E-value=5.8e-07 Score=80.01 Aligned_cols=235 Identities=18% Similarity=0.247 Sum_probs=124.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEE
Q 010759 160 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 239 (502)
Q Consensus 160 ~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~i 239 (502)
++.+++|++||.- .|..|-|=...+.-. .....+.. .......=.-++||||+.+||.+...|+|++
T Consensus 3 ~~~~~~Gk~lAi~-qd~~iEiRsa~Ddf~-----------si~~kcqV-pkD~~PQWRkl~WSpD~tlLa~a~S~G~i~v 69 (282)
T PF15492_consen 3 LALSSDGKLLAIL-QDQCIEIRSAKDDFS-----------SIIGKCQV-PKDPNPQWRKLAWSPDCTLLAYAESTGTIRV 69 (282)
T ss_pred eeecCCCcEEEEE-eccEEEEEeccCCch-----------heeEEEec-CCCCCchheEEEECCCCcEEEEEcCCCeEEE
Confidence 4667889888765 566666654322100 01111111 1111223467899999999999999999999
Q ss_pred EECCCceeEeecCC-------CCCEEEEEecCCC------CEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 240 WSTNGDLKCTLSKH-------KGPIFSLKWNKKG------DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 240 w~~~~~~~~~~~~h-------~~~V~~l~~~~~~------~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+|+.+.....+..- ..+|.++.|.+.. ..|+.-..+|.++-|-
T Consensus 70 fdl~g~~lf~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlvi~Y~G~L~Sy~------------------------ 125 (282)
T PF15492_consen 70 FDLMGSELFVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLVINYRGQLRSYL------------------------ 125 (282)
T ss_pred EecccceeEEcCcccccCCccccceeeeEeeccccccccceeEEEEeccceeeeEE------------------------
Confidence 99887655444321 1234444443211 0122222222222221
Q ss_pred CceEEEEc-CCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEEEeCCCc-----------EEEEeCCCCceee
Q 010759 307 NVSFATSS-TDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVT-----------AKIWNMKQDKYVH 373 (502)
Q Consensus 307 ~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~sgs~dg~-----------i~iwd~~~~~~~~ 373 (502)
++.+ ..+....+ ...|.. +...|+++.++|..++|+.||.... +.-|.+-.+.
T Consensus 126 ----vs~gt~q~y~e~h-------sfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~--- 191 (282)
T PF15492_consen 126 ----VSVGTNQGYQENH-------SFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDS--- 191 (282)
T ss_pred ----EEcccCCcceeeE-------EEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCC---
Confidence 1111 01110000 112222 3567999999999998877765322 1222211111
Q ss_pred ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe------EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 374 DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST------VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 374 ~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~------i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
|. +..++...|+. -.+|.+-+.+.......-...|..|..||||+.||+
T Consensus 192 ---------------Py----------yk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ 246 (282)
T PF15492_consen 192 ---------------PY----------YKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLAC 246 (282)
T ss_pred ---------------Cc----------EEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEE
Confidence 10 11122222211 123333222221111224567999999999999999
Q ss_pred EeCCCcEEEEeCCCCeeEEEEec
Q 010759 448 GSLDKSMHIWSLKEGKIVKTYTG 470 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~~~~~ 470 (502)
...+|.|.+|++..-++.+.+..
T Consensus 247 ih~sG~lsLW~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 247 IHFSGSLSLWEIPSLRLQRSWKQ 269 (282)
T ss_pred EEcCCeEEEEecCcchhhcccch
Confidence 99999999999988777766643
No 282
>KOG1409 consensus Uncharacterized conserved protein, contains WD40 repeats and FYVE domains [Function unknown]
Probab=99.03 E-value=8.6e-09 Score=93.07 Aligned_cols=240 Identities=14% Similarity=0.246 Sum_probs=161.5
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-Ccee-Ee-ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEec----
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLK-CT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV---- 283 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~-~~-~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~---- 283 (502)
++...|+....-|-..-+++.+.|.++|||-.. .... .. ...-..+++++.+++....|+.|-..|++.-+.+
T Consensus 22 G~~d~vn~~~l~~~e~gv~~~s~drtvrv~lkrds~q~wpsI~~~mP~~~~~~~y~~e~~~L~vg~~ngtvtefs~sedf 101 (404)
T KOG1409|consen 22 GSQDDVNAAILIPKEEGVISVSEDRTVRVWLKRDSGQYWPSIYHYMPSPCSAMEYVSESRRLYVGQDNGTVTEFALSEDF 101 (404)
T ss_pred CchhhhhhheeccCCCCeEEccccceeeeEEeccccccCchhhhhCCCCceEeeeeccceEEEEEEecceEEEEEhhhhh
Confidence 445566766667777788999999999999532 2111 11 1223567899999999999999999999988854
Q ss_pred cCcceeEEeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
+.+...+.+..|...+..+-|.-. ..+++.+.|..+.---...+..+..+.- .....++.+.-. +...|...|.|.
T Consensus 102 nkm~~~r~~~~h~~~v~~~if~~~~e~V~s~~~dk~~~~hc~e~~~~lg~Y~~-~~~~t~~~~d~~--~~fvGd~~gqvt 178 (404)
T KOG1409|consen 102 NKMTFLKDYLAHQARVSAIVFSLTHEWVLSTGKDKQFAWHCTESGNRLGGYNF-ETPASALQFDAL--YAFVGDHSGQIT 178 (404)
T ss_pred hhcchhhhhhhhhcceeeEEecCCceeEEEeccccceEEEeeccCCcccceEe-eccCCCCceeeE--EEEecccccceE
Confidence 445566677778888887777543 3344445444332111111111100000 001111112111 444565666665
Q ss_pred EEeC--CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEeeCCCCCEEEEEEC
Q 010759 363 IWNM--KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 363 iwd~--~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~~h~~~v~~l~~s 439 (502)
+-.+ ..-.++.++.+|...+++++|.|... +|.+|..|..|.+||+.-.+ ..+.+.+|...|..+.+-
T Consensus 179 ~lr~~~~~~~~i~~~~~h~~~~~~l~Wd~~~~---------~LfSg~~d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~ 249 (404)
T KOG1409|consen 179 MLKLEQNGCQLITTFNGHTGEVTCLKWDPGQR---------LLFSGASDHSVIMWDIGGRKGTAYELQGHNDKVQALSYA 249 (404)
T ss_pred EEEEeecCCceEEEEcCcccceEEEEEcCCCc---------EEEeccccCceEEEeccCCcceeeeeccchhhhhhhhhh
Confidence 5443 33456778899999999999998764 78999999999999997544 346788999999999998
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCC
Q 010759 440 PTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 440 pdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
+--+.|.+++.||.|.+|+.+-.
T Consensus 250 ~~t~~l~S~~edg~i~~w~mn~~ 272 (404)
T KOG1409|consen 250 QHTRQLISCGEDGGIVVWNMNVK 272 (404)
T ss_pred hhheeeeeccCCCeEEEEeccce
Confidence 88899999999999999998643
No 283
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=99.03 E-value=2.7e-06 Score=78.54 Aligned_cols=221 Identities=14% Similarity=0.167 Sum_probs=143.8
Q ss_pred EEEECC-CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEec-CCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 218 TLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWN-KKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 218 ~l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~-~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
+.+|.+ ++.++++--..+.|..|+..+.....+.... ..++++. ++ ..|+.+...+. .++|+.++++.......
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~~~~~~~--~~G~~~~~~~-g~l~v~~~~~~-~~~d~~~g~~~~~~~~~ 79 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVEVIDLPG--PNGMAFDRPD-GRLYVADSGGI-AVVDPDTGKVTVLADLP 79 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEESSS--EEEEEEECTT-SEEEEEETTCE-EEEETTTTEEEEEEEEE
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEEEEecCC--CceEEEEccC-CEEEEEEcCce-EEEecCCCcEEEEeecc
Confidence 457777 7777777777899999998876655444333 6777787 55 55666655544 44588877543322110
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEEEeCC--------CcEEEEeC
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDD--------VTAKIWNM 366 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~sgs~d--------g~i~iwd~ 366 (502)
. .. .....+.+++.|+|++.++.... |.|..++.
T Consensus 80 ~-------------------------------------~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~ 122 (246)
T PF08450_consen 80 D-------------------------------------GGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDP 122 (246)
T ss_dssp T-------------------------------------TCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEET
T ss_pred C-------------------------------------CCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECC
Confidence 0 01 12346788999999987776654 44666666
Q ss_pred CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--C-----eEEEEeeCCCCCEEEEEEC
Q 010759 367 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--G-----KLLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~-----~~~~~~~~h~~~v~~l~~s 439 (502)
. ++. ..+...-.....++|+|++. .++++-+..+.|..+++.. . +....+....+..-.+++.
T Consensus 123 ~-~~~-~~~~~~~~~pNGi~~s~dg~--------~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD 192 (246)
T PF08450_consen 123 D-GKV-TVVADGLGFPNGIAFSPDGK--------TLYVADSFNGRIWRFDLDADGGELSNRRVFIDFPGGPGYPDGLAVD 192 (246)
T ss_dssp T-SEE-EEEEEEESSEEEEEEETTSS--------EEEEEETTTTEEEEEEEETTTCCEEEEEEEEE-SSSSCEEEEEEEB
T ss_pred C-CeE-EEEecCcccccceEECCcch--------heeecccccceeEEEeccccccceeeeeeEEEcCCCCcCCCcceEc
Confidence 5 332 22223344568899999986 3556777888899998852 2 1122233322347889999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEE-CCCCCEEEEEE
Q 010759 440 PTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCW-NKEGDKIAACF 490 (502)
Q Consensus 440 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~w-s~~g~~la~~~ 490 (502)
.+|++.++.-..+.|.+++.. |+++..+... ..+++++| -++.+.|...+
T Consensus 193 ~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~vTt 244 (246)
T PF08450_consen 193 SDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLYVTT 244 (246)
T ss_dssp TTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEEEEe
Confidence 999998888889999999987 8888877654 57999999 46777766554
No 284
>COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism]
Probab=99.03 E-value=4.6e-06 Score=76.65 Aligned_cols=267 Identities=15% Similarity=0.232 Sum_probs=162.3
Q ss_pred ccccceeEEEECCCCCEEEEEeCC---CcEEEEecCC--CCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGD---STARIWTIAD--GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D---~~i~iW~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.+...++=++|+|+++.|+++-.+ |.|--|.+.. |. +.. + ++......+-+.++++++|+
T Consensus 37 ~~~~nptyl~~~~~~~~LY~v~~~~~~ggvaay~iD~~~G~---------Lt~--l----n~~~~~g~~p~yvsvd~~g~ 101 (346)
T COG2706 37 AELGNPTYLAVNPDQRHLYVVNEPGEEGGVAAYRIDPDDGR---------LTF--L----NRQTLPGSPPCYVSVDEDGR 101 (346)
T ss_pred cccCCCceEEECCCCCEEEEEEecCCcCcEEEEEEcCCCCe---------EEE--e----eccccCCCCCeEEEECCCCC
Confidence 355667889999999999998654 6777776653 22 111 1 11111122337889999999
Q ss_pred EEEEEECC-CcEEEEECC--Cce--eEeecCCCCC----------EEEEEecCCCCEEEEecCC-CeEEEEeccCcceeE
Q 010759 227 LLATGSYD-GQARIWSTN--GDL--KCTLSKHKGP----------IFSLKWNKKGDYLLTGSCD-KTAIVWDVKTEEWKQ 290 (502)
Q Consensus 227 ~l~sg~~d-g~i~iw~~~--~~~--~~~~~~h~~~----------V~~l~~~~~~~~l~sgs~D-~~v~iwd~~~~~~~~ 290 (502)
+++++.+. |.|.++-++ +.+ ......|.++ +....|.|++++|++..-- -.|.+|++..+.+..
T Consensus 102 ~vf~AnY~~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~~y~~~dg~L~~ 181 (346)
T COG2706 102 FVFVANYHSGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIFLYDLDDGKLTP 181 (346)
T ss_pred EEEEEEccCceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEEEEEcccCcccc
Confidence 99998775 788888764 222 1123345555 8889999999999887532 357778776554321
Q ss_pred EeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCC
Q 010759 291 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQD 369 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~~ 369 (502)
.-.. .+ .-...-.-|.|||++++..... .+++|.+|.....
T Consensus 182 ~~~~-------------------------------------~v-~~G~GPRHi~FHpn~k~aY~v~EL~stV~v~~y~~~ 223 (346)
T COG2706 182 ADPA-------------------------------------EV-KPGAGPRHIVFHPNGKYAYLVNELNSTVDVLEYNPA 223 (346)
T ss_pred cccc-------------------------------------cc-CCCCCcceEEEcCCCcEEEEEeccCCEEEEEEEcCC
Confidence 1000 00 1112344589999999876655 4899999988763
Q ss_pred -ceeeeccc---------CCCcEEEEEEccCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCC--CeEEE--EeeCCCCCEE
Q 010759 370 -KYVHDLRE---------HSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVEL--GKLLY--SLNGHREPVY 434 (502)
Q Consensus 370 -~~~~~~~~---------~~~~i~~~~~sp~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~--~~~~~--~~~~h~~~v~ 434 (502)
..+..++. .......|..+|+|+ +|..+ -....|-+|.+.. +++.. ....+...-.
T Consensus 224 ~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGr---------FLYasNRg~dsI~~f~V~~~~g~L~~~~~~~teg~~PR 294 (346)
T COG2706 224 VGKFEELQTIDTLPEDFTGTNWAAAIHISPDGR---------FLYASNRGHDSIAVFSVDPDGGKLELVGITPTEGQFPR 294 (346)
T ss_pred CceEEEeeeeccCccccCCCCceeEEEECCCCC---------EEEEecCCCCeEEEEEEcCCCCEEEEEEEeccCCcCCc
Confidence 22222221 123566788889886 33332 2234677776653 33221 2223334457
Q ss_pred EEEECCCCCEEEEEeCC-CcEEEEeCC--CCeeEEEEe--cCCCEEEEEEC
Q 010759 435 SLAFSPTGEYLASGSLD-KSMHIWSLK--EGKIVKTYT--GNGGIFEVCWN 480 (502)
Q Consensus 435 ~l~~spdg~~lasgs~D-g~i~iw~~~--~~~~~~~~~--~~~~i~~~~ws 480 (502)
...|+|+|++|++++.+ ..|.+|.+. +|.+-.... .-....++-|.
T Consensus 295 ~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 295 DFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred cceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 88999999999988875 468888775 465533322 22334555553
No 285
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=99.01 E-value=4.4e-10 Score=112.53 Aligned_cols=265 Identities=17% Similarity=0.275 Sum_probs=176.3
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+.+++.|+...+|++||-+.++|+.|+-.|.|+++++.+|.. .++++.|..+|+-+.=+-+|.
T Consensus 1094 w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~-----------------e~s~ncH~SavT~vePs~dgs 1156 (1516)
T KOG1832|consen 1094 WRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSM-----------------EESVNCHQSAVTLVEPSVDGS 1156 (1516)
T ss_pred chhhhccccceeeEEeecCCceEEeeeccceEEEEEccCccc-----------------cccccccccccccccccCCcc
Confidence 346778999999999999999999999999999999988742 345667888999998888988
Q ss_pred EEEEEECC-C-cEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 227 LLATGSYD-G-QARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 227 ~l~sg~~d-g-~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
++++.+.- . ...+|+... ...++|. .-.+++|+.....-+.|..-..+.+||++|+....++....
T Consensus 1157 ~~Ltsss~S~PlsaLW~~~s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~------ 1226 (1516)
T KOG1832|consen 1157 TQLTSSSSSSPLSALWDASSTGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDT------ 1226 (1516)
T ss_pred eeeeeccccCchHHHhccccccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcc------
Confidence 77665443 3 567898753 2333332 23577887765444455555678889988876544321100
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcE
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 382 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i 382 (502)
.+....-+++.|+|+..+++ +|| .+||.+....++.|..... -
T Consensus 1227 -------------------------------~~~~y~~n~a~FsP~D~LIl---ndG--vLWDvR~~~aIh~FD~ft~-~ 1269 (1516)
T KOG1832|consen 1227 -------------------------------VTSSYSNNLAHFSPCDTLIL---NDG--VLWDVRIPEAIHRFDQFTD-Y 1269 (1516)
T ss_pred -------------------------------hhhhhhccccccCCCcceEe---eCc--eeeeeccHHHHhhhhhhee-c
Confidence 01111236788999988876 455 3799887766666543221 1
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe------CC-----
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS------LD----- 451 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs------~D----- 451 (502)
..-.|+|.|. -+++ - --|||+++.+.++...... -..|.|+..|..+...- .|
T Consensus 1270 ~~G~FHP~g~--------eVII-N-----SEIwD~RTF~lLh~VP~Ld--qc~VtFNstG~VmYa~~~~~d~~sdvh~~r 1333 (1516)
T KOG1832|consen 1270 GGGGFHPSGN--------EVII-N-----SEIWDMRTFKLLHSVPSLD--QCAVTFNSTGDVMYAMLNIEDVMSDVHTRR 1333 (1516)
T ss_pred ccccccCCCc--------eEEe-e-----chhhhhHHHHHHhcCcccc--ceEEEeccCccchhhhhhhhhhhhhhcccc
Confidence 1223555553 2333 2 2589999888776554332 25678888887554322 00
Q ss_pred ------CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC
Q 010759 452 ------KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 452 ------g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~ 491 (502)
...+-|+..+.+-+.++.....+.++|-+|...+|+.--.
T Consensus 1334 ~k~p~fSSFRTf~a~dYs~iaTi~v~R~~~Dlct~~~D~~l~vIe~ 1379 (1516)
T KOG1832|consen 1334 VKHPLFSSFRTFDAIDYSDIATIPVDRCLLDLCTEPTDSFLGVIEM 1379 (1516)
T ss_pred cccchhhhhccccccccccceeeecccchhhhhcCCccceEEEEec
Confidence 2456677777788888888888999999999888876543
No 286
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=99.01 E-value=4e-07 Score=85.87 Aligned_cols=215 Identities=15% Similarity=0.207 Sum_probs=149.9
Q ss_pred ecCCCCEEEEecCCCeEEEEeccCcceeEEeeec--cc-----Ce--E------EEecCCCceEEEEcCCCeEEEEEcCC
Q 010759 262 WNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH--SG-----PT--L------DVDWRNNVSFATSSTDNMIYVCKIGE 326 (502)
Q Consensus 262 ~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~--~~-----~~--~------~~~~~~~~~~~~~~~d~~i~~~~~~~ 326 (502)
.+.+|+.++-. .-|.|.+||+.+..+.. +... .. +. . .....+...++..| -|..++.+...
T Consensus 274 ~nsDGkrIvFq-~~GdIylydP~td~lek-ldI~lpl~rk~k~~k~~~pskyledfa~~~Gd~ia~VS-RGkaFi~~~~~ 350 (668)
T COG4946 274 ANSDGKRIVFQ-NAGDIYLYDPETDSLEK-LDIGLPLDRKKKQPKFVNPSKYLEDFAVVNGDYIALVS-RGKAFIMRPWD 350 (668)
T ss_pred cCCCCcEEEEe-cCCcEEEeCCCcCccee-eecCCccccccccccccCHHHhhhhhccCCCcEEEEEe-cCcEEEECCCC
Confidence 35677776543 45789999988765432 2111 00 00 0 01111222333333 34455555544
Q ss_pred CcceeeecCCCcceeEEEEcCCCCEEEEEeCCC-cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 327 NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 327 ~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
+-.++ .+|.+.|.-..+.-+++-++.|..|| .+-|||..++.. ..+...-+.|.+++.+|+|. .++.
T Consensus 351 ~~~iq--v~~~~~VrY~r~~~~~e~~vigt~dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK---------~~vv 418 (668)
T COG4946 351 GYSIQ--VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGK---------KVVV 418 (668)
T ss_pred CeeEE--cCCCCceEEEEEccCCcceEEeccCCceEEEEecCCceE-EEeeCCccceEEEEEcCCCc---------EEEE
Confidence 43333 36777788888888888899999999 899999987764 33445667899999999997 6777
Q ss_pred EeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC----CcEEEEeCCCCeeEEEEecCCCEEEEEECC
Q 010759 406 ASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD----KSMHIWSLKEGKIVKTYTGNGGIFEVCWNK 481 (502)
Q Consensus 406 gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D----g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~ 481 (502)
+.....|.+.|+.++.....-+...+-|+...|||++++||-+=-+ ..|+++|..++++....+..+-=++.+|.|
T Consensus 419 aNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~vTT~ta~DfsPaFD~ 498 (668)
T COG4946 419 ANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYDVTTPTAYDFSPAFDP 498 (668)
T ss_pred EcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEEecCCcccccCcccCC
Confidence 8788889999999998765555556779999999999999976555 479999999999887766555567889999
Q ss_pred CCCEEEEEEC
Q 010759 482 EGDKIAACFA 491 (502)
Q Consensus 482 ~g~~la~~~~ 491 (502)
||++|-.-+.
T Consensus 499 d~ryLYfLs~ 508 (668)
T COG4946 499 DGRYLYFLSA 508 (668)
T ss_pred CCcEEEEEec
Confidence 9998765543
No 287
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=99.00 E-value=2.7e-07 Score=80.80 Aligned_cols=215 Identities=14% Similarity=0.054 Sum_probs=139.8
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEEe-eecccCeEEEe--cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC--cce
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVD--WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ--GEV 340 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~--~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~--~~v 340 (502)
..+|+.|+.-|...+|.+.+.+....+ ..+...+.-+. ......+..++.|.++.++++.....-. .-|. -.+
T Consensus 84 c~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~--~~h~~~~~~ 161 (344)
T KOG4532|consen 84 CVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKF--AVHNQNLTQ 161 (344)
T ss_pred ccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccc--eeeccccce
Confidence 358999999999999999876643322 22222111110 1122345567777777777665432211 1222 237
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-e-e-ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC
Q 010759 341 NCVKWDPTGSLLASCSDDVTAKIWNMKQDKY-V-H-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 417 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~-~-~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~ 417 (502)
+++++++|++++++.++...|..|.+..... + . ........-.+..|+.... .+|+++.||++.|||+
T Consensus 162 ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~---------~FAv~~Qdg~~~I~DV 232 (344)
T KOG4532|consen 162 NSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDL---------QFAVVFQDGTCAIYDV 232 (344)
T ss_pred eeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcc---------eEEEEecCCcEEEEEe
Confidence 8999999999999999999999998865432 2 2 1122233345566665543 7899999999999999
Q ss_pred CCCeEEE-----EeeCCCCCEEEEEECCCCC--EEEEEeCCCcEEEEeCCCCeeEEEEec--------C-CCEEEEEECC
Q 010759 418 ELGKLLY-----SLNGHREPVYSLAFSPTGE--YLASGSLDKSMHIWSLKEGKIVKTYTG--------N-GGIFEVCWNK 481 (502)
Q Consensus 418 ~~~~~~~-----~~~~h~~~v~~l~~spdg~--~lasgs~Dg~i~iw~~~~~~~~~~~~~--------~-~~i~~~~ws~ 481 (502)
+...... +-..|.+.|..+.|+|-|. +|.-.-.-+.+++-|+++++-.+.+.. . ..|++.+|+.
T Consensus 233 R~~~tpm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~ 312 (344)
T KOG4532|consen 233 RNMATPMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNN 312 (344)
T ss_pred cccccchhhhcccCCCCCCceEEEEecCCCcceEEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccC
Confidence 8654322 2245889999999998763 566666678999999999875544321 1 2377888888
Q ss_pred CCCEEEEEEC
Q 010759 482 EGDKIAACFA 491 (502)
Q Consensus 482 ~g~~la~~~~ 491 (502)
++..+-+...
T Consensus 313 ~n~s~~v~~e 322 (344)
T KOG4532|consen 313 ENESNDVKNE 322 (344)
T ss_pred CCcccccccc
Confidence 8765554443
No 288
>PRK04043 tolB translocation protein TolB; Provisional
Probab=98.99 E-value=3.8e-07 Score=90.31 Aligned_cols=210 Identities=14% Similarity=0.067 Sum_probs=120.7
Q ss_pred CeEEEEECCCCCE-EEEEECC---CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEE-ecCC--CeEEEEeccCcc
Q 010759 215 DVTTLDWNGEGTL-LATGSYD---GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLT-GSCD--KTAIVWDVKTEE 287 (502)
Q Consensus 215 ~V~~l~~s~~~~~-l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~s-gs~D--~~v~iwd~~~~~ 287 (502)
.+....|+|||+. ++..+.+ ..|.++++.+.....+....+.+....|+|+|..++. .+.+ ..|.++|+.++.
T Consensus 189 ~~~~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~ 268 (419)
T PRK04043 189 LNIFPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIASSQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT 268 (419)
T ss_pred CeEeEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEecCCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc
Confidence 5678899999984 6644443 4677888876555555555666777889999987653 3333 344454554433
Q ss_pred eeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CC--cEEEE
Q 010759 288 WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DV--TAKIW 364 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg--~i~iw 364 (502)
.. .+..+.+......|+|||+.|+-.+. .+ .|.+.
T Consensus 269 ~~------------------------------------------~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~ 306 (419)
T PRK04043 269 LT------------------------------------------QITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMK 306 (419)
T ss_pred EE------------------------------------------EcccCCCccCccEECCCCCEEEEEECCCCCceEEEE
Confidence 21 11112222234579999987665553 33 57777
Q ss_pred eCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC--------CeEEEEeCCCCeEEEEeeCCCCCEEEE
Q 010759 365 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD--------STVKLWDVELGKLLYSLNGHREPVYSL 436 (502)
Q Consensus 365 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d--------g~i~iwd~~~~~~~~~~~~h~~~v~~l 436 (502)
|+.++....... ... ....|+|+|. .++++.... ..|.+.|+..+.. ..+... ......
T Consensus 307 dl~~g~~~rlt~-~g~--~~~~~SPDG~--------~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~-~~~~~p 373 (419)
T PRK04043 307 KLNSGSVEQVVF-HGK--NNSSVSTYKN--------YIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTAN-GVNQFP 373 (419)
T ss_pred ECCCCCeEeCcc-CCC--cCceECCCCC--------EEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCC-CCcCCe
Confidence 887766533221 111 1248999986 233443332 3688888887754 344432 233458
Q ss_pred EECCCCCEEEEEeCC-C--cEEEEeCCCCeeEEEEecCCCEEEEEE
Q 010759 437 AFSPTGEYLASGSLD-K--SMHIWSLKEGKIVKTYTGNGGIFEVCW 479 (502)
Q Consensus 437 ~~spdg~~lasgs~D-g--~i~iw~~~~~~~~~~~~~~~~i~~~~w 479 (502)
.|+|||++|+-.+.+ + .|.+.++............+.+...+|
T Consensus 374 ~~SPDG~~I~f~~~~~~~~~L~~~~l~g~~~~~l~~~~g~~~~p~W 419 (419)
T PRK04043 374 RFSSDGGSIMFIKYLGNQSALGIIRLNYNKSFLFPLKVGKIQSIDW 419 (419)
T ss_pred EECCCCCEEEEEEccCCcEEEEEEecCCCeeEEeecCCCccCCCCC
Confidence 999999988765543 2 366666654333222222344544444
No 289
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.98 E-value=8.5e-07 Score=92.87 Aligned_cols=272 Identities=12% Similarity=0.232 Sum_probs=154.9
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
..|.++.|..+..-++.+...|.|.+-|.+.........-.+.|.+++|+|++..++..+.++++.+-+ .+...+....
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~eivg~vd~GI~aaswS~Dee~l~liT~~~tll~mT-~~f~~i~E~~ 147 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLELEIVGNVDNGISAASWSPDEELLALITGRQTLLFMT-KDFEPIAEKP 147 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccceeeeeeccCceEEEeecCCCcEEEEEeCCcEEEEEe-ccccchhccc
Confidence 579999999999999999999999999877665555555667899999999999999888888877653 1111111111
Q ss_pred ec-----ccCeEEEecCCC-ceEEEEcCCCeEEEEE-cCCCcceeeecCCCcceeEEEEcCCCCEEEEE-----eCCCcE
Q 010759 294 FH-----SGPTLDVDWRNN-VSFATSSTDNMIYVCK-IGENRPIKTFAGHQGEVNCVKWDPTGSLLASC-----SDDVTA 361 (502)
Q Consensus 294 ~~-----~~~~~~~~~~~~-~~~~~~~~d~~i~~~~-~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg-----s~dg~i 361 (502)
.+ .+....+.|-.. ..|-.+.. ....-. ....+.+....-|. .=+.|.|.-||.+||+. .....|
T Consensus 148 L~~d~~~~sk~v~VGwGrkeTqfrgs~g--r~~~~~~~~~ek~~~~~~~~~-~~~~IsWRgDg~~fAVs~~~~~~~~Rki 224 (1265)
T KOG1920|consen 148 LDADDERKSKFVNVGWGRKETQFRGSEG--RQAARQKIEKEKALEQIEQDD-HKTSISWRGDGEYFAVSFVESETGTRKI 224 (1265)
T ss_pred cccccccccccceecccccceeeecchh--hhcccccccccccccchhhcc-CCceEEEccCCcEEEEEEEeccCCceeE
Confidence 10 111222333211 11110000 000000 00000000000111 22469999999999883 333789
Q ss_pred EEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE---eCCCeEEEEeCC---CCeEEEEeeCCCCCEEE
Q 010759 362 KIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA---SFDSTVKLWDVE---LGKLLYSLNGHREPVYS 435 (502)
Q Consensus 362 ~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg---s~dg~i~iwd~~---~~~~~~~~~~h~~~v~~ 435 (502)
+|||.. +.+-..-......-.+++|-|.|. ++++- ..|+.|.+|.-. -|.....+......|..
T Consensus 225 rV~drE-g~Lns~se~~~~l~~~LsWkPsgs---------~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de~~ve~ 294 (1265)
T KOG1920|consen 225 RVYDRE-GALNSTSEPVEGLQHSLSWKPSGS---------LIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDEKEVEE 294 (1265)
T ss_pred EEeccc-chhhcccCcccccccceeecCCCC---------eEeeeeecCCCCcEEEEecCCccccccccCCcccccchhe
Confidence 999976 432221112223446789999886 44442 346678888643 22222223333345899
Q ss_pred EEECCCCCEEEE---EeCCCcEEEEeCCCCe--eEEEEecCCCEEEEEECCCCC-EEEEEECCCeEEEEEe
Q 010759 436 LAFSPTGEYLAS---GSLDKSMHIWSLKEGK--IVKTYTGNGGIFEVCWNKEGD-KIAACFANHTVCVLDF 500 (502)
Q Consensus 436 l~~spdg~~las---gs~Dg~i~iw~~~~~~--~~~~~~~~~~i~~~~ws~~g~-~la~~~~~~~v~v~~~ 500 (502)
|+|+.++..||. ......|++|-+.+.. +-+.+.-..... +.|+|--. .|..-..+|.+.|++|
T Consensus 295 L~Wns~sdiLAv~~~~~e~~~v~lwt~~NyhWYLKq~l~~~~~~~-~~W~p~~~~~L~v~~~sG~~~v~~~ 364 (1265)
T KOG1920|consen 295 LAWNSNSDILAVVTSNLENSLVQLWTTGNYHWYLKQELQFSQKAL-LMWDPVTEKTLHVLRESGQRLVRDF 364 (1265)
T ss_pred eeecCCCCceeeeecccccceEEEEEecCeEEEEEEEEecccccc-ccccCCCceeEEEEecCCcEEEEEE
Confidence 999999999987 4455569999988754 223332222222 77888432 2222225566666555
No 290
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.97 E-value=3.8e-07 Score=90.92 Aligned_cols=328 Identities=20% Similarity=0.257 Sum_probs=199.5
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC----------
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---------- 224 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~---------- 224 (502)
..-.++.|+|.| ++|-|+. ..|.+-|..+-+.+ .....|...|+.+.|.|-
T Consensus 16 sN~~A~Dw~~~G-LiAygsh-slV~VVDs~s~q~i-----------------qsie~h~s~V~~VrWap~~~p~~llS~~ 76 (1062)
T KOG1912|consen 16 SNRNAADWSPSG-LIAYGSH-SLVSVVDSRSLQLI-----------------QSIELHQSAVTSVRWAPAPSPRDLLSPS 76 (1062)
T ss_pred ccccccccCccc-eEEEecC-ceEEEEehhhhhhh-----------------hccccCccceeEEEeccCCCchhccCcc
Confidence 336788999887 4454543 45666664332211 112234567888888652
Q ss_pred --CCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecC---CC-CEEEEecCCCeEEEEeccCcceeEEeeeccc
Q 010759 225 --GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK---KG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 225 --~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~---~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
..+++++...|.|.+||.. +.....+..|..+|..++|-+ +. +.|++-..-.++.+|+..+|+..-.+.....
T Consensus 77 ~~~lliAsaD~~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~ 156 (1062)
T KOG1912|consen 77 SSQLLIASADISGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHE 156 (1062)
T ss_pred ccceeEEeccccCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCc
Confidence 2367788888999999975 344556788889999998865 33 4667777778999999999986655544443
Q ss_pred CeEEEec--CCCceEEEEcCCCeEEEEEcCC-------------------------------------------------
Q 010759 298 PTLDVDW--RNNVSFATSSTDNMIYVCKIGE------------------------------------------------- 326 (502)
Q Consensus 298 ~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~------------------------------------------------- 326 (502)
...++.+ .+...|...+..|.+.+++.-.
T Consensus 157 iLs~f~~DPfd~rh~~~l~s~g~vl~~~~l~~sep~~pgk~~qI~sd~Sdl~~lere~at~ns~ts~~~sa~fity~a~f 236 (1062)
T KOG1912|consen 157 ILSCFRVDPFDSRHFCVLGSKGFVLSCKDLGLSEPDVPGKEFQITSDHSDLAHLERETATGNSTTSTPASAYFITYCAQF 236 (1062)
T ss_pred ceeeeeeCCCCcceEEEEccCceEEEEeccCCCCCCCCceeEEEecCccchhhhhhhhhccccccCCCcchhHHHHHHhh
Confidence 3333332 2344454445555555544311
Q ss_pred -------------------------CcceeeecCCCcceeEEEEcCCC--CEEEEEeCCCcEEEEeCCC-----------
Q 010759 327 -------------------------NRPIKTFAGHQGEVNCVKWDPTG--SLLASCSDDVTAKIWNMKQ----------- 368 (502)
Q Consensus 327 -------------------------~~~~~~~~~h~~~v~~v~~~p~~--~~l~sgs~dg~i~iwd~~~----------- 368 (502)
..++....--.+.+.-+.+-|++ ..+++...||.+.||-.+.
T Consensus 237 af~p~~rn~lfi~~prellv~dle~~~~l~vvpier~~akfv~vlP~~~rd~LfclH~nG~ltirvrk~~~~~f~~~~~~ 316 (1062)
T KOG1912|consen 237 AFSPHWRNILFITFPRELLVFDLEYECCLAVVPIERGGAKFVDVLPDPRRDALFCLHSNGRLTIRVRKEEPTEFKKPNAS 316 (1062)
T ss_pred hcChhhhceEEEEeccceEEEcchhhceeEEEEeccCCcceeEeccCCCcceEEEEecCCeEEEEEeeccCccccccchh
Confidence 11111111112223345566665 4688999999999996443
Q ss_pred -----CceeeecccCC--CcE-----------------------EE----------------------------------
Q 010759 369 -----DKYVHDLREHS--KEI-----------------------YT---------------------------------- 384 (502)
Q Consensus 369 -----~~~~~~~~~~~--~~i-----------------------~~---------------------------------- 384 (502)
+.+++.++... .++ ..
T Consensus 317 l~~dl~~Q~~~vr~m~~~rp~~~~~cPs~~sa~avl~s~g~~~~w~l~~~ri~~~~~s~~iel~~pf~f~~~~~~v~k~~ 396 (1062)
T KOG1912|consen 317 LSMDLGEQVHVVRPMEEFRPVIGASCPSTPSALAVLYSSGDSTFWQLSNGRIHLDYRSSSIELVLPFDFNLSTKLVGKTS 396 (1062)
T ss_pred hccccccceEEEeechhcccceeecCCCChhhhhhhhhcchhHHHhhhcCCcCcccccccccccccccccCceeehhhcc
Confidence 11111110000 000 00
Q ss_pred -EEEccCCCC-----------------------CCCC-CCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEEC
Q 010759 385 -IRWSPTGSG-----------------------TNNP-NQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 385 -~~~sp~g~~-----------------------~~~~-~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 439 (502)
+..+.+|.. ...| .-..++|.|...|+|.++|+.++..-..+..|...|.++.|-
T Consensus 397 l~~LS~dg~h~sGs~~~~~~p~p~~t~~~~~p~~n~~~~~~pLvAvGT~sGTV~vvdvst~~v~~~fsvht~~VkgleW~ 476 (1062)
T KOG1912|consen 397 LISLSDDGSHSSGSTCVRMRPMPELTKVENDPGGNTPAGTVPLVAVGTNSGTVDVVDVSTNAVAASFSVHTSLVKGLEWL 476 (1062)
T ss_pred ccchhhcCCCCCCceeeecccCcccceeecCCCCCccceeeeeEEeecCCceEEEEEecchhhhhhhcccccceeeeeec
Confidence 000111100 0000 012368899999999999999998888888899999999997
Q ss_pred CCCCEEE---------EEeCCCcEEEEeCCCCeeE--EEEe--cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 440 PTGEYLA---------SGSLDKSMHIWSLKEGKIV--KTYT--GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 440 pdg~~la---------sgs~Dg~i~iw~~~~~~~~--~~~~--~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
....++- +|+.-+.+.+-++++|.-. +... ...+|..+.-|..|++||..+.+.-+.+||+|
T Consensus 477 g~sslvSfsys~~n~~sg~vrN~l~vtdLrtGlsk~fR~l~~~despI~~irvS~~~~yLai~Fr~~plEiwd~k 551 (1062)
T KOG1912|consen 477 GNSSLVSFSYSHVNSASGGVRNDLVVTDLRTGLSKRFRGLQKPDESPIRAIRVSSSGRYLAILFRREPLEIWDLK 551 (1062)
T ss_pred cceeEEEeeeccccccccceeeeEEEEEcccccccccccCCCCCcCcceeeeecccCceEEEEecccchHHHhhc
Confidence 6554432 2222346778888887532 2222 24578999999999999999999999999985
No 291
>COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms]
Probab=98.92 E-value=3.7e-08 Score=87.85 Aligned_cols=276 Identities=17% Similarity=0.290 Sum_probs=164.6
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCC-----CCCCCCceEEEEEeeecccccCCCCeEEEEECCCC--CE
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG-----GAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG--TL 227 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~--~~ 227 (502)
.-|+++-|...|.||+||...|.|.++.-.....-. ..|........++.+ .....|..+.|-.++ ..
T Consensus 27 d~ItaVefd~tg~YlatGDkgGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSl-----eieEKin~I~w~~~t~r~h 101 (460)
T COG5170 27 DKITAVEFDETGLYLATGDKGGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSL-----EIEEKINAIEWFDDTGRNH 101 (460)
T ss_pred ceeeEEEeccccceEeecCCCceEEEeecccccccchhhhhhhcccccchhhhhhc-----cHHHHhhheeeecCCCcce
Confidence 458999999999999999999999999754432100 011111111111111 112347778887654 45
Q ss_pred EEEEECCCcEEEEECCCceeEe---------e-cCCCCCEEEEEe--cC---CCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 228 LATGSYDGQARIWSTNGDLKCT---------L-SKHKGPIFSLKW--NK---KGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~~~~~~---------~-~~h~~~V~~l~~--~~---~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
++..+.|.+|++|.+....... + ....+++++..- -| ....++++ . -.|+| -
T Consensus 102 FLlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa-~--p~rvy----------a 168 (460)
T COG5170 102 FLLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAA-K--PCRVY----------A 168 (460)
T ss_pred EEEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEe-c--cceec----------c
Confidence 7777899999999864321111 1 111233333210 00 00112221 1 11222 1
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCc---ceeeecCCC-----cceeEEEEcCCC-CEEEEEeCCCcEEE
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR---PIKTFAGHQ-----GEVNCVKWDPTG-SLLASCSDDVTAKI 363 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~---~~~~~~~h~-----~~v~~v~~~p~~-~~l~sgs~dg~i~i 363 (502)
..|...+.++.+..+..+..+++|-.|.+|++...- .+..+..|. ..|++..|+|.. ..+.-.+..|.|++
T Consensus 169 NaH~yhiNSiS~NsD~et~lSaDdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~Ikl 248 (460)
T COG5170 169 NAHPYHINSISFNSDKETLLSADDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEIKL 248 (460)
T ss_pred ccceeEeeeeeecCchheeeeccceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcEEe
Confidence 234445667778777778888888888888875432 233444553 357889999964 56667778899999
Q ss_pred EeCCCCcee----------------eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEe
Q 010759 364 WNMKQDKYV----------------HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSL 426 (502)
Q Consensus 364 wd~~~~~~~----------------~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~ 426 (502)
-|++...+. .-+......|..+.|+++|+ ++++-+. -+|+|||+... .++.++
T Consensus 249 ~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngr---------yIlsRdy-ltvkiwDvnm~k~pikTi 318 (460)
T COG5170 249 NDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGR---------YILSRDY-LTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred hhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCc---------EEEEecc-ceEEEEecccccCCceee
Confidence 999843211 01122345678899999986 6776654 58999999854 456665
Q ss_pred eCCC------------CCEE---EEEECCCCCEEEEEeCCCcEEEEe
Q 010759 427 NGHR------------EPVY---SLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 427 ~~h~------------~~v~---~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.-|. ..|. .+.||.|.+.+.+||.....-||-
T Consensus 319 ~~h~~l~~~l~d~YEnDaifdkFeisfSgd~~~v~sgsy~NNfgiyp 365 (460)
T COG5170 319 PMHCDLMDELNDVYENDAIFDKFEISFSGDDKHVLSGSYSNNFGIYP 365 (460)
T ss_pred chHHHHHHHHHhhhhccceeeeEEEEecCCcccccccccccceeeec
Confidence 4332 3343 478888888888888776665654
No 292
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.92 E-value=1.9e-08 Score=92.92 Aligned_cols=167 Identities=14% Similarity=0.174 Sum_probs=105.8
Q ss_pred eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcE
Q 010759 158 CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQA 237 (502)
Q Consensus 158 ~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i 237 (502)
..+..+|.+++||.+..+....++++...... . ..+...+... ....+..+..+........++....+
T Consensus 66 ~~~~~s~~~~llAv~~~~K~~~~f~~~~~~~~--~--kl~~~~~v~~-------~~~ai~~~~~~~sv~v~dkagD~~~~ 134 (390)
T KOG3914|consen 66 ALVLTSDSGRLVAVATSSKQRAVFDYRENPKG--A--KLLDVSCVPK-------RPTAISFIREDTSVLVADKAGDVYSF 134 (390)
T ss_pred cccccCCCceEEEEEeCCCceEEEEEecCCCc--c--eeeeEeeccc-------CcceeeeeeccceEEEEeecCCceee
Confidence 34456666777777766666555555432210 0 0011111110 12234444444444444445555666
Q ss_pred EEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCC
Q 010759 238 RIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDN 317 (502)
Q Consensus 238 ~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 317 (502)
.+|.........+-+|-.-++.|+|+||+++++++..|..||+-....--.+.
T Consensus 135 di~s~~~~~~~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~Ie--------------------------- 187 (390)
T KOG3914|consen 135 DILSADSGRCEPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIE--------------------------- 187 (390)
T ss_pred eeecccccCcchhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchh---------------------------
Confidence 77766533344567899999999999999999999999999986432211000
Q ss_pred eEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc
Q 010759 318 MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 318 ~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 376 (502)
..+-||+..|..++.-++ ..|++||.|+++++||+.+++.++++.
T Consensus 188 -------------sfclGH~eFVS~isl~~~-~~LlS~sGD~tlr~Wd~~sgk~L~t~d 232 (390)
T KOG3914|consen 188 -------------SFCLGHKEFVSTISLTDN-YLLLSGSGDKTLRLWDITSGKLLDTCD 232 (390)
T ss_pred -------------hhccccHhheeeeeeccC-ceeeecCCCCcEEEEecccCCcccccc
Confidence 123479999999988754 558999999999999999999887654
No 293
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.91 E-value=4.5e-06 Score=82.88 Aligned_cols=304 Identities=12% Similarity=0.078 Sum_probs=170.7
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccC-CCCe-EEEEECCCCCEEEEEECCCcEEEEECC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK-SKDV-TTLDWNGEGTLLATGSYDGQARIWSTN 243 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V-~~l~~s~~~~~l~sg~~dg~i~iw~~~ 243 (502)
+..++.++.++.+.-+|..+|+.......... ....... ...+ ..+.. .+..++.++.+|.+..+|..
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~--------~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~ 138 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEK--------DGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAE 138 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCc--------ccccccccccccccccEE--ECCEEEEEcCCCEEEEEECC
Confidence 55777777788888888877754322111000 0000000 0000 00111 34566778889999999974
Q ss_pred -CceeEeecCCCCCEEE-EEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe-----EEEecCCCceEEEEcCC
Q 010759 244 -GDLKCTLSKHKGPIFS-LKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-----LDVDWRNNVSFATSSTD 316 (502)
Q Consensus 244 -~~~~~~~~~h~~~V~~-l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~d 316 (502)
++........ +.+.+ ... .+..++.++.++.+..+|+.+++.+-.+....... ....... ..++.+..+
T Consensus 139 tG~~~W~~~~~-~~~~ssP~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v~~-~~v~~~~~~ 214 (394)
T PRK11138 139 DGEVAWQTKVA-GEALSRPVV--SDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPATAF-GGAIVGGDN 214 (394)
T ss_pred CCCCcccccCC-CceecCCEE--ECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEEEC-CEEEEEcCC
Confidence 5554443322 22221 111 24567788889999999999998765554321100 0000012 234556677
Q ss_pred CeEEEEEcCCCcceeeecCCC----c---ceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEE
Q 010759 317 NMIYVCKIGENRPIKTFAGHQ----G---EVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 387 (502)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~h~----~---~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 387 (502)
+.++.++..+++.+-.+.... . ....+..+| .+..++.++.+|.+..+|..+++.+-..... ....+..
T Consensus 215 g~v~a~d~~~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~~ 292 (394)
T PRK11138 215 GRVSAVLMEQGQLIWQQRISQPTGATEIDRLVDVDTTPVVVGGVVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFAV 292 (394)
T ss_pred CEEEEEEccCChhhheeccccCCCccchhcccccCCCcEEECCEEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcEE
Confidence 888888877665443221100 0 011111122 2456667778999999999988765432211 1111111
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC-CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE-PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~-~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
. .+ .|..++.+|.+..+|..+|+.++....... ...+... .+.+|+.++.||.|.+.|..+|+++.
T Consensus 293 ~-~~----------~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~~tG~~~~ 359 (394)
T PRK11138 293 D-GG----------RIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINREDGRFVA 359 (394)
T ss_pred E-CC----------EEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEECCCCCEEE
Confidence 1 11 355567899999999999998876532111 1122222 25577888999999999999999987
Q ss_pred EEecC-CCEEE-EEECCCCCEEEEEECCCeEEEEEe
Q 010759 467 TYTGN-GGIFE-VCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 467 ~~~~~-~~i~~-~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+.-. ..+.+ ... .+.+|..++.+|.|+.++.
T Consensus 360 ~~~~~~~~~~s~P~~--~~~~l~v~t~~G~l~~~~~ 393 (394)
T PRK11138 360 QQKVDSSGFLSEPVV--ADDKLLIQARDGTVYAITR 393 (394)
T ss_pred EEEcCCCcceeCCEE--ECCEEEEEeCCceEEEEeC
Confidence 77542 23332 122 3568899999999887753
No 294
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.89 E-value=2e-06 Score=78.92 Aligned_cols=216 Identities=19% Similarity=0.179 Sum_probs=133.4
Q ss_pred CCcEEEEEC-CCceeEeecC---CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 234 DGQARIWST-NGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 234 dg~i~iw~~-~~~~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
+|.|..||. .+.......- ....+ .. ..+.+.++++++.++.+..||+.+++.+-.+.... ++.......+..
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~-~~-~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~~~-~~~~~~~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPV-AT-AVPDGGRVYVASGDGNLYALDAKTGKVLWRFDLPG-PISGAPVVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEE-ET-EEEETTEEEEEETTSEEEEEETTTSEEEEEEECSS-CGGSGEEEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCcc-ce-EEEeCCEEEEEcCCCEEEEEECCCCCEEEEeeccc-cccceeeecccc
Confidence 577788886 4555544432 22222 11 22356778888999999999999998777666522 211111222333
Q ss_pred EEEEcCCCeEEEEEcCCCcceeee-cCCC---cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc----
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTF-AGHQ---GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE---- 381 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~-~~h~---~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~---- 381 (502)
++....++.++.++..+++.+-.. .... ..........++..++.+..++.|..+|.++++.+-........
T Consensus 79 v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~ 158 (238)
T PF13360_consen 79 VYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLVALDPKTGKLLWKYPVGEPRGSSP 158 (238)
T ss_dssp EEEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEEEEETTTTEEEEEEESSTT-SS--
T ss_pred cccccceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEEEEecCCCcEEEEeecCCCCCCcc
Confidence 444446779999998888876653 3221 11122223334788888888999999999999987665443211
Q ss_pred E-------EEEEEccCCCCCCCCCCcEEEEEEeCCCe-EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 382 I-------YTIRWSPTGSGTNNPNQQLILASASFDST-VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 382 i-------~~~~~sp~g~~~~~~~~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
+ ..+.+ .++ .+..++.++. +.+ |+.+++.++... ...+..+ ..+++..|+.++.++.
T Consensus 159 ~~~~~~~~~~~~~-~~~----------~v~~~~~~g~~~~~-d~~tg~~~w~~~--~~~~~~~-~~~~~~~l~~~~~~~~ 223 (238)
T PF13360_consen 159 ISSFSDINGSPVI-SDG----------RVYVSSGDGRVVAV-DLATGEKLWSKP--ISGIYSL-PSVDGGTLYVTSSDGR 223 (238)
T ss_dssp EEEETTEEEEEEC-CTT----------EEEEECCTSSEEEE-ETTTTEEEEEEC--SS-ECEC-EECCCTEEEEEETTTE
T ss_pred eeeecccccceEE-ECC----------EEEEEcCCCeEEEE-ECCCCCEEEEec--CCCccCC-ceeeCCEEEEEeCCCE
Confidence 1 11111 111 3445566665 555 999999877544 2223332 3467788888889999
Q ss_pred EEEEeCCCCeeEEE
Q 010759 454 MHIWSLKEGKIVKT 467 (502)
Q Consensus 454 i~iw~~~~~~~~~~ 467 (502)
|.+||+++|+.+..
T Consensus 224 l~~~d~~tG~~~W~ 237 (238)
T PF13360_consen 224 LYALDLKTGKVVWQ 237 (238)
T ss_dssp EEEEETTTTEEEEE
T ss_pred EEEEECCCCCEEeE
Confidence 99999999998764
No 295
>KOG3914 consensus WD repeat protein WDR4 [Function unknown]
Probab=98.88 E-value=5.4e-08 Score=89.89 Aligned_cols=86 Identities=23% Similarity=0.339 Sum_probs=70.0
Q ss_pred eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec-ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 331 KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 331 ~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
....||-..+..|+|+||+++|+++..|..|||-....--.+..+ -+|..-|..++.-++- .|+|||.|
T Consensus 145 ~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~----------~LlS~sGD 214 (390)
T KOG3914|consen 145 EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNY----------LLLSGSGD 214 (390)
T ss_pred chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHhheeeeeeccCc----------eeeecCCC
Confidence 345689999999999999999999999999999766554444444 3587888888876653 47899999
Q ss_pred CeEEEEeCCCCeEEEEe
Q 010759 410 STVKLWDVELGKLLYSL 426 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~ 426 (502)
++|++||+.+|+.+.++
T Consensus 215 ~tlr~Wd~~sgk~L~t~ 231 (390)
T KOG3914|consen 215 KTLRLWDITSGKLLDTC 231 (390)
T ss_pred CcEEEEecccCCccccc
Confidence 99999999999988654
No 296
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.85 E-value=6e-09 Score=65.59 Aligned_cols=37 Identities=49% Similarity=0.917 Sum_probs=35.0
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWT 182 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~ 182 (502)
.+.++++|..+|++|+|+|++.+|+||+.|++|++||
T Consensus 3 ~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 3 CVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred EEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 4578999999999999999999999999999999997
No 297
>PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g ....
Probab=98.84 E-value=1.1e-08 Score=64.32 Aligned_cols=39 Identities=41% Similarity=0.867 Sum_probs=36.9
Q ss_pred CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 420 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 420 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
++++.++.+|..+|++|+|+|++.+|++|+.|+.|++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367889999999999999999999999999999999997
No 298
>PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal
Probab=98.78 E-value=3.1e-06 Score=75.48 Aligned_cols=192 Identities=21% Similarity=0.296 Sum_probs=109.0
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC------CCEEEE
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE------GTLLAT 230 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~------~~~l~s 230 (502)
=+-++||||+.+||.+...|+|+++|+..... ..+.........-..+|..|.|-.- ...|+.
T Consensus 46 WRkl~WSpD~tlLa~a~S~G~i~vfdl~g~~l-----------f~I~p~~~~~~d~~~Aiagl~Fl~~~~s~~ws~ELlv 114 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAESTGTIRVFDLMGSEL-----------FVIPPAMSFPGDLSDAIAGLIFLEYKKSAQWSYELLV 114 (282)
T ss_pred heEEEECCCCcEEEEEcCCCeEEEEeccccee-----------EEcCcccccCCccccceeeeEeeccccccccceeEEE
Confidence 35789999999999999999999999864321 1111111011122345666666432 124556
Q ss_pred EECCCcEEEEECC-----C-ceeEe--ec-CCCCCEEEEEecCCCCEEEEecCCCe-----------EEEEeccCcceeE
Q 010759 231 GSYDGQARIWSTN-----G-DLKCT--LS-KHKGPIFSLKWNKKGDYLLTGSCDKT-----------AIVWDVKTEEWKQ 290 (502)
Q Consensus 231 g~~dg~i~iw~~~-----~-~~~~~--~~-~h~~~V~~l~~~~~~~~l~sgs~D~~-----------v~iwd~~~~~~~~ 290 (502)
-.+.|.++=|-+. + ....+ +. .+...|.++.|+|..+.|+.|+.... +..|-+-.+.
T Consensus 115 i~Y~G~L~Sy~vs~gt~q~y~e~hsfsf~~~yp~Gi~~~vy~p~h~LLlVgG~~~~~~~~s~a~~~GLtaWRiL~~~--- 191 (282)
T PF15492_consen 115 INYRGQLRSYLVSVGTNQGYQENHSFSFSSHYPHGINSAVYHPKHRLLLVGGCEQNQDGMSKASSCGLTAWRILSDS--- 191 (282)
T ss_pred EeccceeeeEEEEcccCCcceeeEEEEecccCCCceeEEEEcCCCCEEEEeccCCCCCccccccccCceEEEEcCCC---
Confidence 6777777766431 1 12222 32 24678999999999988877765322 1222221111
Q ss_pred EeeecccCeEEEecCCCceEEEEcCCCe------EEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 291 QFEFHSGPTLDVDWRNNVSFATSSTDNM------IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~------i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
+....+++..+.. ..++.+-..+...........|..|..||||++||+.+.+|.|.+|
T Consensus 192 ---------------Pyyk~v~~~~~~~~~~~~~~~~~~~~~~~~fs~~~~~~d~i~kmSlSPdg~~La~ih~sG~lsLW 256 (282)
T PF15492_consen 192 ---------------PYYKQVTSSEDDITASSKRRGLLRIPSFKFFSRQGQEQDGIFKMSLSPDGSLLACIHFSGSLSLW 256 (282)
T ss_pred ---------------CcEEEccccCccccccccccceeeccceeeeeccccCCCceEEEEECCCCCEEEEEEcCCeEEEE
Confidence 0111111221111 1122221111111111234578899999999999999999999999
Q ss_pred eCCCCceeeeccc
Q 010759 365 NMKQDKYVHDLRE 377 (502)
Q Consensus 365 d~~~~~~~~~~~~ 377 (502)
++.+-++......
T Consensus 257 ~iPsL~~~~~W~~ 269 (282)
T PF15492_consen 257 EIPSLRLQRSWKQ 269 (282)
T ss_pred ecCcchhhcccch
Confidence 9987666555443
No 299
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.78 E-value=4.1e-08 Score=88.84 Aligned_cols=158 Identities=15% Similarity=0.232 Sum_probs=108.2
Q ss_pred cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc----eeeecccCCCcEEEEEEcc
Q 010759 314 STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK----YVHDLREHSKEIYTIRWSP 389 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~~~~~i~~~~~sp 389 (502)
+.+..+.+.++.++.. +.| ...+.|.++.|...++++..|..+|.|..+|++.+. .....-.|...|+++..-.
T Consensus 231 G~sqqv~L~nvetg~~-qsf-~sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rlyh~Ssvtslq~Lq 308 (425)
T KOG2695|consen 231 GLSQQVLLTNVETGHQ-QSF-QSKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRLYHDSSVTSLQILQ 308 (425)
T ss_pred cccceeEEEEeecccc-ccc-ccchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEEEcCcchhhhhhhc
Confidence 4444455555544321 222 245678899999989999999999999999998651 1122224666666665432
Q ss_pred CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEeeCCCCCEEEE--EECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 390 TGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSLNGHREPVYSL--AFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 390 ~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l--~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
. .++ +|++.+.+|+|++||++.-++ +....||...-.-+ -..+....++++|.|...+||.++.|.+
T Consensus 309 ~-------s~q-~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl~~ghL 380 (425)
T KOG2695|consen 309 F-------SQQ-KLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSLDSGHL 380 (425)
T ss_pred c-------ccc-eEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEecccCce
Confidence 1 122 466678899999999997776 88888885432222 2345667899999999999999999999
Q ss_pred EEEEecCC-----CEEEEEECC
Q 010759 465 VKTYTGNG-----GIFEVCWNK 481 (502)
Q Consensus 465 ~~~~~~~~-----~i~~~~ws~ 481 (502)
+.+++... .+.+++|..
T Consensus 381 l~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 381 LCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred eeccCCCCccccccccceehhc
Confidence 98876432 345566544
No 300
>COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown]
Probab=98.77 E-value=1.5e-05 Score=75.50 Aligned_cols=307 Identities=18% Similarity=0.190 Sum_probs=176.5
Q ss_pred ECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC-cEEE
Q 010759 162 WSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG-QARI 239 (502)
Q Consensus 162 ~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg-~i~i 239 (502)
|++ +|.+++..|. |.+.|.+...+-.+ + .++...|.-..+..+++-++.|..|| .+-|
T Consensus 327 fa~~~Gd~ia~VSR-GkaFi~~~~~~~~i-------------q------v~~~~~VrY~r~~~~~e~~vigt~dgD~l~i 386 (668)
T COG4946 327 FAVVNGDYIALVSR-GKAFIMRPWDGYSI-------------Q------VGKKGGVRYRRIQVDPEGDVIGTNDGDKLGI 386 (668)
T ss_pred hccCCCcEEEEEec-CcEEEECCCCCeeE-------------E------cCCCCceEEEEEccCCcceEEeccCCceEEE
Confidence 444 5777777763 55666554332111 0 12345588888888888999999999 8999
Q ss_pred EECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEE-cCC--
Q 010759 240 WSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS-STD-- 316 (502)
Q Consensus 240 w~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d-- 316 (502)
++..+.....+...-+.|.+++.+|+|++++.+.....+.+.|+.++.....-...-+-+..+.|+++.++++- -.+
T Consensus 387 yd~~~~e~kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy 466 (668)
T COG4946 387 YDKDGGEVKRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGY 466 (668)
T ss_pred EecCCceEEEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcce
Confidence 99998888888888899999999999999999988889999999999866554555567889999888776543 233
Q ss_pred --CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee--cccCCCcEEEEEEccCCC
Q 010759 317 --NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGS 392 (502)
Q Consensus 317 --~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~ 392 (502)
..|+++++..++.... ...++.=.+-+|.|++++|.--+.- -.|....+.+.. +..+..+...+ -+.
T Consensus 467 ~tq~Iklydm~~~Kiy~v-TT~ta~DfsPaFD~d~ryLYfLs~R----sLdPs~Drv~fnf~f~~vskPylv~----L~~ 537 (668)
T COG4946 467 YTQSIKLYDMDGGKIYDV-TTPTAYDFSPAFDPDGRYLYFLSAR----SLDPSNDRVIFNFSFQRVSKPYLVV----LGR 537 (668)
T ss_pred eeeeEEEEecCCCeEEEe-cCCcccccCcccCCCCcEEEEEecc----ccCCCCCeeEEEEEEeeeccceEEE----ecC
Confidence 4678888877664432 2222333467889999987654431 112222222211 11122221111 111
Q ss_pred CCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE--------EEeeCCCCC-EEEEEECCCC---CEEEEEeCCCcEEEEeCC
Q 010759 393 GTNNPNQQLILASASFDSTVKLWDVELGKLL--------YSLNGHREP-VYSLAFSPTG---EYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 393 ~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~--------~~~~~h~~~-v~~l~~spdg---~~lasgs~Dg~i~iw~~~ 460 (502)
+..+|-.++.=-.-+.+|.+-+=++...... ..+.+..+. |.-.++--.| +++-.+-.-|.|.+||++
T Consensus 538 g~~sP~~q~p~~~~~ea~e~dle~ie~r~eP~pVee~dY~sI~~lk~~killfs~pi~Gefs~yy~gq~~kG~l~~ydle 617 (668)
T COG4946 538 GYYSPFNQPPDEANSEAGEVDLEGIEDRVEPFPVEEGDYRSIAGLKNGKILLFSYPIHGEFSQYYWGQPEKGRLEKYDLE 617 (668)
T ss_pred CCCChhhcCchhcCccccceehhhhcccccccccCccceeEeeecCCCeEEEEEeeccchhhhhhcCCCccceEEEEecc
Confidence 1111111100001122232222211111000 011111111 2111111112 122223345788888888
Q ss_pred CCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 461 EGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 461 ~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+.... ...+.++..|+||+.+.. -.++.++.+++-
T Consensus 618 tkk~~e~---k~nvss~rlS~D~s~ilv-k~d~kl~~f~ve 654 (668)
T COG4946 618 TKKVEEY---KDNVSSFRLSSDGSKILV-KLDGKLRLFDVE 654 (668)
T ss_pred hhhHHHH---hcccceEEEcCCCCEEEE-EeCCeEEEEecc
Confidence 7553221 235788999999998888 778899998864
No 301
>KOG4532 consensus WD40-like repeat containing protein [General function prediction only]
Probab=98.75 E-value=3e-06 Score=74.45 Aligned_cols=229 Identities=14% Similarity=0.066 Sum_probs=142.6
Q ss_pred CCCEEEEEECCCcEEEEECCCc--eeEeecCCCCCEEEEEe-cCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 224 EGTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLKW-NKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~~-~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
..-+|+.||..|...+|..... .......|...|+-+.= ....-.+..++.|.++++.++..+..........-.+.
T Consensus 83 kc~~la~gG~~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~sndht~k~~~~~~~s~~~~~h~~~~~~n 162 (344)
T KOG4532|consen 83 KCVTLADGGASGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIASNDHTGKTMVVSGDSNKFAVHNQNLTQN 162 (344)
T ss_pred cccEEEeccccceeeeecccCcccceeeecccccchhhhhhhcccccceeeccCCcceeEEEEecCcccceeecccccee
Confidence 3458899999999999987632 22233344444432211 11123477889999999998866543332222222255
Q ss_pred EEecCCCceEEE-EcCCCeEEEEEcCCCc--cee-eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee--
Q 010759 301 DVDWRNNVSFAT-SSTDNMIYVCKIGENR--PIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-- 374 (502)
Q Consensus 301 ~~~~~~~~~~~~-~~~d~~i~~~~~~~~~--~~~-~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~-- 374 (502)
.+.+.++..+.+ .++...|+.+.+.... .+. ..+.-+..-.+..|+.....+|++..||++.|||++.......
T Consensus 163 s~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~ 242 (344)
T KOG4532|consen 163 SLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMATPMAEI 242 (344)
T ss_pred eeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEecccccchhhh
Confidence 666666666654 4666778887776432 223 2222334456788999999999999999999999987654322
Q ss_pred ---cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-------CC-CCEEEEEECCCCC
Q 010759 375 ---LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-------HR-EPVYSLAFSPTGE 443 (502)
Q Consensus 375 ---~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-------h~-~~v~~l~~spdg~ 443 (502)
-..|.+.+..+.|+|-|.. . +|+-.-.-+.+.+-|+++++....+.. |. ..|..-.|+.++.
T Consensus 243 sstrp~hnGa~R~c~Fsl~g~l------D-LLf~sEhfs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~ 315 (344)
T KOG4532|consen 243 SSTRPHHNGAFRVCRFSLYGLL------D-LLFISEHFSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENE 315 (344)
T ss_pred cccCCCCCCceEEEEecCCCcc------e-EEEEecCcceEEEEEcccCceeeEEecCccccccccccccccccccCCCc
Confidence 2247889999999986653 1 344444567899999998876554422 22 2367777777766
Q ss_pred EEEEEeCCCcEEEEeCC
Q 010759 444 YLASGSLDKSMHIWSLK 460 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~ 460 (502)
-+.+.+.+. +.=|++.
T Consensus 316 s~~v~~e~~-~ae~ni~ 331 (344)
T KOG4532|consen 316 SNDVKNELQ-GAEYNIL 331 (344)
T ss_pred ccccccchh-hheeecc
Confidence 555554442 3344443
No 302
>KOG0309 consensus Conserved WD40 repeat-containing protein [Function unknown]
Probab=98.75 E-value=1.2e-07 Score=93.80 Aligned_cols=278 Identities=17% Similarity=0.315 Sum_probs=178.9
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-eeEeecCCCC--CEEEEEecCCC--CEEEEecCCCeEEEEeccCc-
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKG--PIFSLKWNKKG--DYLLTGSCDKTAIVWDVKTE- 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~--~V~~l~~~~~~--~~l~sgs~D~~v~iwd~~~~- 286 (502)
.+++..+..+|.|+-++.++.-|. .+-|+... .....-.|-. .|-.+.|+|.. .+-++........+|++...
T Consensus 24 ~~~~~a~si~p~grdi~lAsr~gl-~i~dld~p~~ppr~l~h~tpw~vad~qws~h~a~~~wiVsts~qkaiiwnlA~ss 102 (1081)
T KOG0309|consen 24 DGGFNAVSINPSGRDIVLASRQGL-YIIDLDDPFTPPRWLHHITPWQVADVQWSPHPAKPYWIVSTSNQKAIIWNLAKSS 102 (1081)
T ss_pred cCcccceeeccccchhhhhhhcCe-EEEeccCCCCCceeeeccCcchhcceecccCCCCceeEEecCcchhhhhhhhcCC
Confidence 356778888999998888887654 34444321 1111122322 35556777654 34444444455678887432
Q ss_pred --ceeEEeeecccCeEEEecCC--CceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 287 --EWKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 287 --~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
...-.+.+|...+.++.|.. ...+++++.|..+..|+++.. .|+..+..-......|+|+-....+...+....|
T Consensus 103 ~~aIef~lhghsraitd~n~~~q~pdVlatcsvdt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlasshg~~i 182 (1081)
T KOG0309|consen 103 SNAIEFVLHGHSRAITDINFNPQHPDVLATCSVDTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLASSHGNDI 182 (1081)
T ss_pred ccceEEEEecCccceeccccCCCCCcceeeccccccceeeeccCCCcceeeeecccccCceeeecccCcchhhhccCCce
Confidence 22334556788899999864 456789999999999999864 4565555545567789998766666667777889
Q ss_pred EEEeCCCCc-eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE--EEeeCCCCCEEEEEE
Q 010759 362 KIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL--YSLNGHREPVYSLAF 438 (502)
Q Consensus 362 ~iwd~~~~~-~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~ 438 (502)
++||++.+. ++..+++|...++.+.|..--. ..+.+.+.||+|++||..+...- +.+ ....+|+.-.|
T Consensus 183 ~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~--------s~~~s~~~d~tvkfw~y~kSt~e~~~~v-tt~~piw~~r~ 253 (1081)
T KOG0309|consen 183 FVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKY--------SEIMSSSNDGTVKFWDYSKSTTESKRTV-TTNFPIWRGRY 253 (1081)
T ss_pred EEEeccCCCcceEEecccceeeehHHHhhhhh--------hhhcccCCCCceeeecccccccccceec-cccCcceeccc
Confidence 999998764 5778888888888887754321 24778999999999998754321 222 23456777777
Q ss_pred CCCCCEEEE--EeCCCcEE---------EEeCCCC-eeEEEEecCCC-EEEEEECCCCC----------EEEEEECCCeE
Q 010759 439 SPTGEYLAS--GSLDKSMH---------IWSLKEG-KIVKTYTGNGG-IFEVCWNKEGD----------KIAACFANHTV 495 (502)
Q Consensus 439 spdg~~las--gs~Dg~i~---------iw~~~~~-~~~~~~~~~~~-i~~~~ws~~g~----------~la~~~~~~~v 495 (502)
-|-|.-..+ --.+..+. .|+..++ ..+.+|.|+.. |..+.|...+. .|++=+.|.++
T Consensus 254 ~Pfg~g~~~mp~~G~n~v~~~~c~n~d~e~n~~~~~~pVh~F~GH~D~V~eFlWR~r~e~~~d~d~rdfQLVTWSkD~~l 333 (1081)
T KOG0309|consen 254 LPFGEGYCIMPMVGGNMVPQLRCENSDLEWNVFDLNTPVHTFVGHDDVVLEFLWRKRKECDGDYDSRDFQLVTWSKDQTL 333 (1081)
T ss_pred cccCceeEeccccCCeeeeeccccchhhhhccccCCcceeeecCcchHHHHHhhhhcccccCCCCccceeEEEeecCCce
Confidence 775532221 11111333 3444433 45788887754 56666755332 78999999999
Q ss_pred EEEEe
Q 010759 496 CVLDF 500 (502)
Q Consensus 496 ~v~~~ 500 (502)
++|-+
T Consensus 334 rlWpI 338 (1081)
T KOG0309|consen 334 RLWPI 338 (1081)
T ss_pred Eeeec
Confidence 99965
No 303
>PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A ....
Probab=98.73 E-value=1e-05 Score=74.32 Aligned_cols=211 Identities=16% Similarity=0.162 Sum_probs=132.4
Q ss_pred CCeEEEEeccCcceeEEeeecc--cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHS--GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 352 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 352 (502)
+++|..||+++++.+-...... ..........+..+++++.++.++.++..+++.+-.+.. .+.+...- ...+..+
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~~~~-~~~~~~~~-~~~~~~v 79 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWRFDL-PGPISGAP-VVDGGRV 79 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEEEEC-SSCGGSGE-EEETTEE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEEeec-ccccccee-eeccccc
Confidence 6889999999998776665421 122211232444555567899999999988877655543 22211111 2245566
Q ss_pred EEEeCCCcEEEEeCCCCceeeec-ccCC---CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 353 ASCSDDVTAKIWNMKQDKYVHDL-REHS---KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~~~~~~-~~~~---~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
+.++.++.++.+|..+++.+... .... ...........+. .++.+..++.|..+|+++|+.++....
T Consensus 80 ~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 80 YVGTSDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGD---------RLYVGTSSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp EEEETTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETT---------EEEEEETCSEEEEEETTTTEEEEEEES
T ss_pred ccccceeeeEecccCCcceeeeeccccccccccccccCceEecC---------EEEEEeccCcEEEEecCCCcEEEEeec
Confidence 67778889999999999887663 2211 0011111111122 456677799999999999999988866
Q ss_pred CCCC----------E-EEEEECCCCCEEEEEeCCCc-EEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 429 HREP----------V-YSLAFSPTGEYLASGSLDKS-MHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 429 h~~~----------v-~~l~~spdg~~lasgs~Dg~-i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
.... + ..+.+. ++ .+..++.++. +.+ |+.+++.+.... ...+..+ ..+++..|+.++.++.|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~-~~-~v~~~~~~g~~~~~-d~~tg~~~w~~~-~~~~~~~-~~~~~~~l~~~~~~~~l~ 225 (238)
T PF13360_consen 151 GEPRGSSPISSFSDINGSPVIS-DG-RVYVSSGDGRVVAV-DLATGEKLWSKP-ISGIYSL-PSVDGGTLYVTSSDGRLY 225 (238)
T ss_dssp STT-SS--EEEETTEEEEEECC-TT-EEEEECCTSSEEEE-ETTTTEEEEEEC-SS-ECEC-EECCCTEEEEEETTTEEE
T ss_pred CCCCCCcceeeecccccceEEE-CC-EEEEEcCCCeEEEE-ECCCCCEEEEec-CCCccCC-ceeeCCEEEEEeCCCEEE
Confidence 4422 1 223333 44 6777777775 555 999999775433 3333332 357778888888999999
Q ss_pred EEEee
Q 010759 497 VLDFR 501 (502)
Q Consensus 497 v~~~~ 501 (502)
.||++
T Consensus 226 ~~d~~ 230 (238)
T PF13360_consen 226 ALDLK 230 (238)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99975
No 304
>KOG2695 consensus WD40 repeat protein [General function prediction only]
Probab=98.73 E-value=5.7e-08 Score=87.94 Aligned_cols=156 Identities=13% Similarity=0.256 Sum_probs=122.3
Q ss_pred EECC--CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc----ceeEEee
Q 010759 220 DWNG--EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFE 293 (502)
Q Consensus 220 ~~s~--~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~----~~~~~~~ 293 (502)
+|+- .|-. ++.|.+-.|-+-++++.....|. .++.|.++.|+..++.++.|...|.|..+|++.+ .+..+..
T Consensus 218 awSlni~gyh-fs~G~sqqv~L~nvetg~~qsf~-sksDVfAlQf~~s~nLv~~GcRngeI~~iDLR~rnqG~~~~a~rl 295 (425)
T KOG2695|consen 218 AWSLNIMGYH-FSVGLSQQVLLTNVETGHQQSFQ-SKSDVFALQFAGSDNLVFNGCRNGEIFVIDLRCRNQGNGWCAQRL 295 (425)
T ss_pred hhhhccceee-ecccccceeEEEEeecccccccc-cchhHHHHHhcccCCeeEecccCCcEEEEEeeecccCCCcceEEE
Confidence 5653 2334 56667778888888877666666 6788999999999999999999999999999876 4555666
Q ss_pred ecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcc---eeeecCCCcce--eEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 294 FHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRP---IKTFAGHQGEV--NCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 294 ~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~---~~~~~~h~~~v--~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
.|...+.++... .+..+++++.++.|.+||++..+. +..+.||.+.- .-+-.++....+++++.|-..|||.+
T Consensus 296 yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl 375 (425)
T KOG2695|consen 296 YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSL 375 (425)
T ss_pred EcCcchhhhhhhccccceEeeccCcCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEec
Confidence 777777776542 456678889999999999987666 88999996532 23445667788999999999999999
Q ss_pred CCCceeeeccc
Q 010759 367 KQDKYVHDLRE 377 (502)
Q Consensus 367 ~~~~~~~~~~~ 377 (502)
+.+.++.++..
T Consensus 376 ~~ghLl~tipf 386 (425)
T KOG2695|consen 376 DSGHLLCTIPF 386 (425)
T ss_pred ccCceeeccCC
Confidence 99988877654
No 305
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.73 E-value=3.3e-07 Score=92.91 Aligned_cols=183 Identities=17% Similarity=0.262 Sum_probs=137.3
Q ss_pred CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEE
Q 010759 265 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVK 344 (502)
Q Consensus 265 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~ 344 (502)
++..++-|+....+..+|+++.+..+......+.+.-+. .++..+..+...|+|.+-|..+.+++.++..|++.|..++
T Consensus 146 ~~~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR-~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfD 224 (1118)
T KOG1275|consen 146 GPSTLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR-YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFD 224 (1118)
T ss_pred CCcceeecchhhheeeeecccceeeeeeeccCCceEEEE-ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeee
Confidence 345688888888899999999887777766654443333 3556677888999999999999999999999999997765
Q ss_pred EcCCCCEEEEEeCC---------CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 345 WDPTGSLLASCSDD---------VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 345 ~~p~~~~l~sgs~d---------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
. .|++|++||.. .-|+|||++..+.+.-+..+.++ .-++|.|.-. ..++.+|..|...+-
T Consensus 225 v--~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~--------t~~~V~S~sGq~q~v 293 (1118)
T KOG1275|consen 225 V--QGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLT--------TRLAVTSQSGQFQFV 293 (1118)
T ss_pred c--cCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhccccc--------ceEEEEecccceeec
Confidence 5 68999999864 45789999988776655554443 4456666543 257778888999998
Q ss_pred e---CCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 416 D---VELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 416 d---~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
| +.+. .-++.+......|..+.+|++|+.||.|..+|.|.+|.-
T Consensus 294 d~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa~ 341 (1118)
T KOG1275|consen 294 DTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWAD 341 (1118)
T ss_pred cccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeecC
Confidence 8 3332 122333434455999999999999999999999999973
No 306
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.62 E-value=1.2e-06 Score=76.45 Aligned_cols=161 Identities=17% Similarity=0.209 Sum_probs=97.3
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc-eeEEeeecccCeEEEecCCCceEEEEcCC------CeEE
Q 010759 248 CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSSTD------NMIY 320 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------~~i~ 320 (502)
..+..|+.+-..-..+--++.+++++.||.+.+.+.+.-. .............+...-....++.++.= +..+
T Consensus 83 ~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~~i~s~~~g~~n~~d~~~ 162 (319)
T KOG4714|consen 83 KVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGNSILSGGCGNWNAQDNFY 162 (319)
T ss_pred eeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeecccEEecCCcceEeecccee
Confidence 3444555543333344456789999999999999875411 01111110000111111112223333222 2334
Q ss_pred EEEcCCCcceeeecC---CCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCce-eeecccCCCcEEEEEEccCCCCCC
Q 010759 321 VCKIGENRPIKTFAG---HQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTN 395 (502)
Q Consensus 321 ~~~~~~~~~~~~~~~---h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~-~~~~~~~~~~i~~~~~sp~g~~~~ 395 (502)
.|+++. +.++.. ....|.+++-+|.. +++++|+.||.+-+||++.... +..+..|..++..+.|+|....
T Consensus 163 a~~~~p---~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~-- 237 (319)
T KOG4714|consen 163 ANTLDP---IKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPE-- 237 (319)
T ss_pred eecccc---cccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheeccCCCch--
Confidence 455443 333221 12348899999865 5677888999999999988754 4556789999999999987542
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 396 NPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
-|++++.||.+--||..+
T Consensus 238 ------~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 238 ------HLFTCSEDGSLWHWDAST 255 (319)
T ss_pred ------heeEecCCCcEEEEcCCC
Confidence 478999999999999763
No 307
>PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A ....
Probab=98.59 E-value=0.00022 Score=65.75 Aligned_cols=213 Identities=16% Similarity=0.180 Sum_probs=126.9
Q ss_pred EEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC-CCCCEEEEEECCCc
Q 010759 159 ACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN-GEGTLLATGSYDGQ 236 (502)
Q Consensus 159 ~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s-~~~~~l~sg~~dg~ 236 (502)
+.+|.+ ++.++++--..+.|..|+..++... . .. ......+++. +++.+ +.+...+
T Consensus 4 gp~~d~~~g~l~~~D~~~~~i~~~~~~~~~~~-----------~---~~------~~~~~G~~~~~~~g~l-~v~~~~~- 61 (246)
T PF08450_consen 4 GPVWDPRDGRLYWVDIPGGRIYRVDPDTGEVE-----------V---ID------LPGPNGMAFDRPDGRL-YVADSGG- 61 (246)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTTTEEE-----------E---EE------SSSEEEEEEECTTSEE-EEEETTC-
T ss_pred ceEEECCCCEEEEEEcCCCEEEEEECCCCeEE-----------E---Ee------cCCCceEEEEccCCEE-EEEEcCc-
Confidence 578898 6778888778899999998765310 0 00 1125666777 56554 4555544
Q ss_pred EEEEECCCceeEeecC------CCCCEEEEEecCCCCEEEEecCC--------CeEEEEeccCcceeEEeeecccCeEEE
Q 010759 237 ARIWSTNGDLKCTLSK------HKGPIFSLKWNKKGDYLLTGSCD--------KTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 237 i~iw~~~~~~~~~~~~------h~~~V~~l~~~~~~~~l~sgs~D--------~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
+.++|........+.. .......+++.|+|+..++.+.. +.|..++.. ++
T Consensus 62 ~~~~d~~~g~~~~~~~~~~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~--------------- 125 (246)
T PF08450_consen 62 IAVVDPDTGKVTVLADLPDGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GK--------------- 125 (246)
T ss_dssp EEEEETTTTEEEEEEEEETTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SE---------------
T ss_pred eEEEecCCCcEEEEeeccCCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-Ce---------------
Confidence 4555876543332211 23456788999998866665433 223333332 11
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCce-------eee
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKY-------VHD 374 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~~~~-------~~~ 374 (502)
+..+...-...+.++|+|+++.| ++-+..+.|..|++..... +..
T Consensus 126 ---------------------------~~~~~~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~~~~~~~~~~~~~~~~~~ 178 (246)
T PF08450_consen 126 ---------------------------VTVVADGLGFPNGIAFSPDGKTLYVADSFNGRIWRFDLDADGGELSNRRVFID 178 (246)
T ss_dssp ---------------------------EEEEEEEESSEEEEEEETTSSEEEEEETTTTEEEEEEEETTTCCEEEEEEEEE
T ss_pred ---------------------------EEEEecCcccccceEECCcchheeecccccceeEEEeccccccceeeeeeEEE
Confidence 11111112346789999999865 4667788888888753221 122
Q ss_pred cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE-CCCCCEEE
Q 010759 375 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF-SPTGEYLA 446 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-spdg~~la 446 (502)
+....+..-.+++..+|. +.++....+.|.+++.+ |+.+..+.--...+++++| .|+...|.
T Consensus 179 ~~~~~g~pDG~~vD~~G~---------l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L~ 241 (246)
T PF08450_consen 179 FPGGPGYPDGLAVDSDGN---------LWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTLY 241 (246)
T ss_dssp -SSSSCEEEEEEEBTTS----------EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEEE
T ss_pred cCCCCcCCCcceEcCCCC---------EEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEEE
Confidence 222222366788888775 55556678899999988 8888777644458999999 46655544
No 308
>KOG1912 consensus WD40 repeat protein [General function prediction only]
Probab=98.58 E-value=1.2e-06 Score=87.57 Aligned_cols=159 Identities=18% Similarity=0.324 Sum_probs=124.6
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCC--CC-CCCcEEEEEEeCCCeEEEE
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT--NN-PNQQLILASASFDSTVKLW 415 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~--~~-~~~~~~l~sgs~dg~i~iw 415 (502)
.-.+++|+|.| +||-|+.. .|.+-|..+-+.++.+..|...|+.++|+|....- .. +..+++||++...|.|-+|
T Consensus 17 N~~A~Dw~~~G-LiAygshs-lV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~lliAsaD~~GrIil~ 94 (1062)
T KOG1912|consen 17 NRNAADWSPSG-LIAYGSHS-LVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLLIASADISGRIILV 94 (1062)
T ss_pred cccccccCccc-eEEEecCc-eEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCccccceeEEeccccCcEEEE
Confidence 35678999876 66666654 68888999999999999999999999999876432 22 2356789999999999999
Q ss_pred eCCCCeEEEEeeCCCCCEEEEEECC---CC-CEEEEEeCCCcEEEEeCCCCeeEEEEecCCC-EEEEEECC-CCCEEEEE
Q 010759 416 DVELGKLLYSLNGHREPVYSLAFSP---TG-EYLASGSLDKSMHIWSLKEGKIVKTYTGNGG-IFEVCWNK-EGDKIAAC 489 (502)
Q Consensus 416 d~~~~~~~~~~~~h~~~v~~l~~sp---dg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~-i~~~~ws~-~g~~la~~ 489 (502)
|...+..+..+..|..+|.+++|-| +. .+|++-....+|.+|+..+|.....+.-... ..++.+.| |.+++..-
T Consensus 95 d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~Wk~~ys~~iLs~f~~DPfd~rh~~~l 174 (1062)
T KOG1912|consen 95 DFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKFWKYDYSHEILSCFRVDPFDSRHFCVL 174 (1062)
T ss_pred EehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCceeeccccCCcceeeeeeCCCCcceEEEE
Confidence 9999988888999999999999865 33 4666667778999999999999887764433 45688888 66777776
Q ss_pred ECCCeEEEEE
Q 010759 490 FANHTVCVLD 499 (502)
Q Consensus 490 ~~~~~v~v~~ 499 (502)
+..|.|.+-+
T Consensus 175 ~s~g~vl~~~ 184 (1062)
T KOG1912|consen 175 GSKGFVLSCK 184 (1062)
T ss_pred ccCceEEEEe
Confidence 6667665543
No 309
>KOG1275 consensus PAB-dependent poly(A) ribonuclease, subunit PAN2 [Replication, recombination and repair]
Probab=98.56 E-value=1.8e-06 Score=87.85 Aligned_cols=178 Identities=17% Similarity=0.185 Sum_probs=128.9
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 387 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 387 (502)
..++.++-...+...|+.+.+..+...-..+.|.-++ .+++++.+|...|+|.+-|.++.+.++++.+|.+.+..+..
T Consensus 148 ~~~i~Gg~Q~~li~~Dl~~~~e~r~~~v~a~~v~imR--~Nnr~lf~G~t~G~V~LrD~~s~~~iht~~aHs~siSDfDv 225 (1118)
T KOG1275|consen 148 STLIMGGLQEKLIHIDLNTEKETRTTNVSASGVTIMR--YNNRNLFCGDTRGTVFLRDPNSFETIHTFDAHSGSISDFDV 225 (1118)
T ss_pred cceeecchhhheeeeecccceeeeeeeccCCceEEEE--ecCcEEEeecccceEEeecCCcCceeeeeeccccceeeeec
Confidence 3455566666677777776665555443333454444 46789999999999999999999999999999999887654
Q ss_pred ccCCCCCCCCCCcEEEEEEeC---------CCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC-CCEEEEEeCCCcEEEE
Q 010759 388 SPTGSGTNNPNQQLILASASF---------DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT-GEYLASGSLDKSMHIW 457 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~---------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd-g~~lasgs~Dg~i~iw 457 (502)
. |. +|++++. |..|++||++..+.+.-+.-+.++ .=+.|+|. ...+|.+|..|...+-
T Consensus 226 ~--GN---------lLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P-~flrf~Psl~t~~~V~S~sGq~q~v 293 (1118)
T KOG1275|consen 226 Q--GN---------LLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGP-QFLRFHPSLTTRLAVTSQSGQFQFV 293 (1118)
T ss_pred c--CC---------eEEEeecccccccccccchhhhhhhhhhhccCCcccccCc-hhhhhcccccceEEEEecccceeec
Confidence 3 32 5666664 567899999987766555444444 44678886 4577888889999998
Q ss_pred eCC---CCe-eEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 458 SLK---EGK-IVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 458 ~~~---~~~-~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
|.. +.. -+...... ..+.++++|+.|+.||.|..+|.|.+|-
T Consensus 294 d~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g~v~~wa 340 (1118)
T KOG1275|consen 294 DTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEGHVNLWA 340 (1118)
T ss_pred cccccCCCccceeEEccCCCcceeEEecCCCceEEEecccCcEeeec
Confidence 833 221 12222333 3499999999999999999999999994
No 310
>KOG1832 consensus HIV-1 Vpr-binding protein [Cell cycle control, cell division, chromosome partitioning]
Probab=98.56 E-value=4.5e-08 Score=98.55 Aligned_cols=217 Identities=16% Similarity=0.267 Sum_probs=148.1
Q ss_pred eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc--eEEEEcCCC-eEEEEEcC
Q 010759 249 TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV--SFATSSTDN-MIYVCKIG 325 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~-~i~~~~~~ 325 (502)
+|..|+...++++|+-..++|+.|+..|.|+++++.+|.....+.+|..++..+....+. .+.+++... -..+|+..
T Consensus 1096 ~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~ 1175 (1516)
T KOG1832|consen 1096 SFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDAS 1175 (1516)
T ss_pred hhhccccceeeEEeecCCceEEeeeccceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhccc
Confidence 566788889999999999999999999999999999999999999999999888765332 233332222 34567765
Q ss_pred C-CcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc----CCCcEEEEEEccCCCCCCCCCCc
Q 010759 326 E-NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE----HSKEIYTIRWSPTGSGTNNPNQQ 400 (502)
Q Consensus 326 ~-~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~----~~~~i~~~~~sp~g~~~~~~~~~ 400 (502)
. ..+...|. .-.++.|+..-..-+.|..-..+.|||+.++..+.++-. ..-.-....|+|+..
T Consensus 1176 s~~~~~Hsf~----ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~-------- 1243 (1516)
T KOG1832|consen 1176 STGGPRHSFD----EDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDT-------- 1243 (1516)
T ss_pred cccCcccccc----ccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcc--------
Confidence 4 23333443 345788887655445555556789999999877655321 111224556777654
Q ss_pred EEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEEC
Q 010759 401 LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWN 480 (502)
Q Consensus 401 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws 480 (502)
+++ .|| .+||++..+.++.|......+ .=.|+|.|.-++.-+ .|||+++.+++++.+.-. =..+.|+
T Consensus 1244 -LIl---ndG--vLWDvR~~~aIh~FD~ft~~~-~G~FHP~g~eVIINS-----EIwD~RTF~lLh~VP~Ld-qc~VtFN 1310 (1516)
T KOG1832|consen 1244 -LIL---NDG--VLWDVRIPEAIHRFDQFTDYG-GGGFHPSGNEVIINS-----EIWDMRTFKLLHSVPSLD-QCAVTFN 1310 (1516)
T ss_pred -eEe---eCc--eeeeeccHHHHhhhhhheecc-cccccCCCceEEeec-----hhhhhHHHHHHhcCcccc-ceEEEec
Confidence 333 466 469999887777765443211 235999998887755 489999998887654321 1357788
Q ss_pred CCCCEEEEEE
Q 010759 481 KEGDKIAACF 490 (502)
Q Consensus 481 ~~g~~la~~~ 490 (502)
..|+.+.++.
T Consensus 1311 stG~VmYa~~ 1320 (1516)
T KOG1832|consen 1311 STGDVMYAML 1320 (1516)
T ss_pred cCccchhhhh
Confidence 8887665543
No 311
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.55 E-value=6.2e-06 Score=76.56 Aligned_cols=244 Identities=14% Similarity=0.139 Sum_probs=132.0
Q ss_pred cCCCCeEEEEECCCCC-EEEEEECCCcEEEEECCCcee-EeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcc
Q 010759 211 EKSKDVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~-~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~ 287 (502)
.+...|..++|||..+ ++..++.+..|+|.|++.... ..+..| .++++++|.-+. ++++.|-..|.|.+||++..+
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred ccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccCCC
Confidence 4567799999999877 788899999999999986544 345555 889999998765 688999999999999997543
Q ss_pred e-eEEee--ecccCeEEEecC-------CCceEEEEcCCCeEEEEEcC--CCcceeeec-CCCcceeEEEEcCCCCE-EE
Q 010759 288 W-KQQFE--FHSGPTLDVDWR-------NNVSFATSSTDNMIYVCKIG--ENRPIKTFA-GHQGEVNCVKWDPTGSL-LA 353 (502)
Q Consensus 288 ~-~~~~~--~~~~~~~~~~~~-------~~~~~~~~~~d~~i~~~~~~--~~~~~~~~~-~h~~~v~~v~~~p~~~~-l~ 353 (502)
- ...+. ....|+..+.+. ....++.++.+-. .|.+. ...+..++. +..+...++++++..+. |+
T Consensus 270 ~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~l~--f~ei~~s~~~~p~vlele~pG~cismqy~~~snh~l~ 347 (463)
T KOG1645|consen 270 GPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTVLQ--FYEIVFSAECLPCVLELEPPGICISMQYHGVSNHLLL 347 (463)
T ss_pred chHhhhhhhhccCcceeecccCccccccccceEEeeehhhh--hhhhhccccCCCcccccCCCcceeeeeecCccceEEE
Confidence 1 11111 122344444432 1222222222221 22221 111111111 12334445555553333 33
Q ss_pred EEeCCCc---EE---E-EeCCCCceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE
Q 010759 354 SCSDDVT---AK---I-WNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS 425 (502)
Q Consensus 354 sgs~dg~---i~---i-wd~~~~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~ 425 (502)
|.-.+.. ++ . -|...+.++...+ .+.+. ..-..+....--..++..+++..|...+.+.+||..+++.+++
T Consensus 348 tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs-~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~D~~s~evvQ~ 426 (463)
T KOG1645|consen 348 TYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGS-KQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQDPHSFEVVQT 426 (463)
T ss_pred EecCCCCCccceeeeeeeccccCceeeeecccccCC-cccccccccceeccccccEEEEecCCcceeEEeccchhheeee
Confidence 3322110 11 0 0112222221111 11000 0000000000001122245677788888999999999999998
Q ss_pred eeCCCCCEEEEEECCC--CCEEEEEeCCCcEEEEeCC
Q 010759 426 LNGHREPVYSLAFSPT--GEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 426 ~~~h~~~v~~l~~spd--g~~lasgs~Dg~i~iw~~~ 460 (502)
+. ...+|.+++.... +.||++-. |..++||..+
T Consensus 427 l~-~~epv~Dicp~~~n~~syLa~LT-d~~v~Iyk~e 461 (463)
T KOG1645|consen 427 LA-LSEPVLDICPNDTNGSSYLALLT-DDRVHIYKNE 461 (463)
T ss_pred cc-cCcceeecceeecCCcchhhhee-cceEEEEecC
Confidence 86 4588988876532 35777665 4468887654
No 312
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=98.54 E-value=2.4e-05 Score=77.85 Aligned_cols=148 Identities=16% Similarity=0.245 Sum_probs=103.6
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
|...|.--+++..+++++-|+.-|.+++|+-..+...... . ....+.+..+..|++..++|.|+
T Consensus 32 ~~~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~--------------~--~~~~~~~~~~~vs~~e~lvAagt 95 (726)
T KOG3621|consen 32 FPARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLK--------------N--EGATGITCVRSVSSVEYLVAAGT 95 (726)
T ss_pred CcceEEEEEeecCCceEEEecccceEEEEecCchhhhccc--------------c--cCccceEEEEEecchhHhhhhhc
Confidence 4555666677888999999999999999987655322100 0 01234566678899999999999
Q ss_pred CCCcEEEEECCCc----eeEe---ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc----eeEEeeecccCeEE
Q 010759 233 YDGQARIWSTNGD----LKCT---LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE----WKQQFEFHSGPTLD 301 (502)
Q Consensus 233 ~dg~i~iw~~~~~----~~~~---~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~----~~~~~~~~~~~~~~ 301 (502)
..|.|.++..+.. +... -..|+..|++++|++++..|++|...|+|.+--+.+.. ..+.+-.-.++|..
T Consensus 96 ~~g~V~v~ql~~~~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQ 175 (726)
T KOG3621|consen 96 ASGRVSVFQLNKELPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQ 175 (726)
T ss_pred CCceEEeehhhccCCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEE
Confidence 9999999976532 1111 13478899999999999999999999999988777621 12233334556777
Q ss_pred EecCCCceEEEEcCC
Q 010759 302 VDWRNNVSFATSSTD 316 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d 316 (502)
+++.....+++...-
T Consensus 176 lD~~q~~LLVStl~r 190 (726)
T KOG3621|consen 176 LDYLQSYLLVSTLTR 190 (726)
T ss_pred eecccceehHhhhhh
Confidence 777666655554443
No 313
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.52 E-value=8.6e-06 Score=82.03 Aligned_cols=176 Identities=19% Similarity=0.257 Sum_probs=119.8
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
...|+.++-+|.+++.+..... .....|... .-+|.+++|||.||+|.|-.+.+.+..+.+. ...++.+++
T Consensus 49 ~~~~~~GtH~g~v~~~~~~~~~--~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~d-f~rpiksia 119 (846)
T KOG2066|consen 49 DKFFALGTHRGAVYLTTCQGNP--KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYD-FKRPIKSIA 119 (846)
T ss_pred cceeeeccccceEEEEecCCcc--ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEe-cCCcceeEE
Confidence 3456677777788877765442 222233332 4579999999999999999988877665543 346889999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVE--LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
++|+-... +...+++|+.-| +.++.-. ..+....+..-.++|.+++|. |.++|-++.+| |+|||+.+++.
T Consensus 120 l~Pd~~~~----~sk~fv~GG~ag-lvL~er~wlgnk~~v~l~~~eG~I~~i~W~--g~lIAWand~G-v~vyd~~~~~~ 191 (846)
T KOG2066|consen 120 LHPDFSRQ----QSKQFVSGGMAG-LVLSERNWLGNKDSVVLSEGEGPIHSIKWR--GNLIAWANDDG-VKVYDTPTRQR 191 (846)
T ss_pred eccchhhh----hhhheeecCcce-EEEehhhhhcCccceeeecCccceEEEEec--CcEEEEecCCC-cEEEeccccce
Confidence 99982211 112477888888 7776432 111111345556899999996 77999999888 99999999888
Q ss_pred EEEEecCC-C------EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 465 VKTYTGNG-G------IFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 465 ~~~~~~~~-~------i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+...+... . ...+.|.++. .|+.|..+ +|.|.-+|
T Consensus 192 l~~i~~p~~~~R~e~fpphl~W~~~~-~LVIGW~d-~v~i~~I~ 233 (846)
T KOG2066|consen 192 LTNIPPPSQSVRPELFPPHLHWQDED-RLVIGWGD-SVKICSIK 233 (846)
T ss_pred eeccCCCCCCCCcccCCCceEecCCC-eEEEecCC-eEEEEEEe
Confidence 76664321 1 3578998776 56666655 67777665
No 314
>KOG1920 consensus IkappaB kinase complex, IKAP component [Transcription]
Probab=98.51 E-value=8e-05 Score=78.63 Aligned_cols=197 Identities=14% Similarity=0.244 Sum_probs=124.5
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
+.|.++.|..++.-++.+..+|.|.+-|..+... ... + .....|.+++||||+..++..+..
T Consensus 69 ~~i~s~~fl~d~~~i~v~~~~G~iilvd~et~~~-----------eiv----g---~vd~GI~aaswS~Dee~l~liT~~ 130 (1265)
T KOG1920|consen 69 DEIVSVQFLADTNSICVITALGDIILVDPETLEL-----------EIV----G---NVDNGISAASWSPDEELLALITGR 130 (1265)
T ss_pred cceEEEEEecccceEEEEecCCcEEEEcccccce-----------eee----e---eccCceEEEeecCCCcEEEEEeCC
Confidence 6799999999999888899999999887665421 111 1 124579999999999999999988
Q ss_pred CcEEEEECC------C------------------ceeEeecCCCC---------------------CEEEEEecCCCCEE
Q 010759 235 GQARIWSTN------G------------------DLKCTLSKHKG---------------------PIFSLKWNKKGDYL 269 (502)
Q Consensus 235 g~i~iw~~~------~------------------~~~~~~~~h~~---------------------~V~~l~~~~~~~~l 269 (502)
+++.+-+.. . .....|.+..+ .=+++.|.-+|.+|
T Consensus 131 ~tll~mT~~f~~i~E~~L~~d~~~~sk~v~VGwGrkeTqfrgs~gr~~~~~~~~~ek~~~~~~~~~~~~~IsWRgDg~~f 210 (1265)
T KOG1920|consen 131 QTLLFMTKDFEPIAEKPLDADDERKSKFVNVGWGRKETQFRGSEGRQAARQKIEKEKALEQIEQDDHKTSISWRGDGEYF 210 (1265)
T ss_pred cEEEEEeccccchhccccccccccccccceecccccceeeecchhhhcccccccccccccchhhccCCceEEEccCCcEE
Confidence 888765421 0 00112221111 11458999999998
Q ss_pred EE-----ecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEE----cCCCeEEEEEcCCCc---ceeeecCCC
Q 010759 270 LT-----GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATS----STDNMIYVCKIGENR---PIKTFAGHQ 337 (502)
Q Consensus 270 ~s-----gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~i~~~~~~~~~---~~~~~~~h~ 337 (502)
++ ...-+.|++||-. +.+...-....+.-.++.|.+...++++ +.|+.|.++....-. -...+....
T Consensus 211 AVs~~~~~~~~RkirV~drE-g~Lns~se~~~~l~~~LsWkPsgs~iA~iq~~~sd~~IvffErNGL~hg~f~l~~p~de 289 (1265)
T KOG1920|consen 211 AVSFVESETGTRKIRVYDRE-GALNSTSEPVEGLQHSLSWKPSGSLIAAIQCKTSDSDIVFFERNGLRHGEFVLPFPLDE 289 (1265)
T ss_pred EEEEEeccCCceeEEEeccc-chhhcccCcccccccceeecCCCCeEeeeeecCCCCcEEEEecCCccccccccCCcccc
Confidence 87 3333899999965 4332222222233356777665444332 345566666543211 111222234
Q ss_pred cceeEEEEcCCCCEEEE---EeCCCcEEEEeCCCCc
Q 010759 338 GEVNCVKWDPTGSLLAS---CSDDVTAKIWNMKQDK 370 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~s---gs~dg~i~iwd~~~~~ 370 (502)
.++..++|+.++..||. +.....|++|-+.+..
T Consensus 290 ~~ve~L~Wns~sdiLAv~~~~~e~~~v~lwt~~Nyh 325 (1265)
T KOG1920|consen 290 KEVEELAWNSNSDILAVVTSNLENSLVQLWTTGNYH 325 (1265)
T ss_pred cchheeeecCCCCceeeeecccccceEEEEEecCeE
Confidence 45899999999999887 5555569999876543
No 315
>KOG2066 consensus Vacuolar assembly/sorting protein VPS41 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.49 E-value=2.2e-05 Score=79.19 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=121.4
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
++|++++ +++|+-|+-+|.|++.+.++.. .+...|... ...|.+++|||.||+|.|-.+-+.+...++.+
T Consensus 42 is~~av~--~~~~~~GtH~g~v~~~~~~~~~-~~~~~~s~~------~~~Gey~asCS~DGkv~I~sl~~~~~~~~~df- 111 (846)
T KOG2066|consen 42 ISCCAVH--DKFFALGTHRGAVYLTTCQGNP-KTNFDHSSS------ILEGEYVASCSDDGKVVIGSLFTDDEITQYDF- 111 (846)
T ss_pred HHHHHhh--cceeeeccccceEEEEecCCcc-ccccccccc------ccCCceEEEecCCCcEEEeeccCCccceeEec-
Confidence 4444544 4789999999999999988765 333345433 56789999999999999887765543322221
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-----CCEEEEEeCCCcEEEEeCC---
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-----GSLLASCSDDVTAKIWNMK--- 367 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----~~~l~sgs~dg~i~iwd~~--- 367 (502)
..++.+|+++|+ .+.+++|+.-| +.++.-+
T Consensus 112 -----------------------------------------~rpiksial~Pd~~~~~sk~fv~GG~ag-lvL~er~wlg 149 (846)
T KOG2066|consen 112 -----------------------------------------KRPIKSIALHPDFSRQQSKQFVSGGMAG-LVLSERNWLG 149 (846)
T ss_pred -----------------------------------------CCcceeEEeccchhhhhhhheeecCcce-EEEehhhhhc
Confidence 235677888887 46788999988 7665421
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCC------EEEEEECCC
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREP------VYSLAFSPT 441 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~------v~~l~~spd 441 (502)
....+ .+....++|+++.|.-+ ++|=++.+| |++||+.+++.+..+..-... -..+.|.++
T Consensus 150 nk~~v-~l~~~eG~I~~i~W~g~-----------lIAWand~G-v~vyd~~~~~~l~~i~~p~~~~R~e~fpphl~W~~~ 216 (846)
T KOG2066|consen 150 NKDSV-VLSEGEGPIHSIKWRGN-----------LIAWANDDG-VKVYDTPTRQRLTNIPPPSQSVRPELFPPHLHWQDE 216 (846)
T ss_pred Cccce-eeecCccceEEEEecCc-----------EEEEecCCC-cEEEeccccceeeccCCCCCCCCcccCCCceEecCC
Confidence 11111 34556789999999643 677777666 999999988877665432222 245788776
Q ss_pred CCEEEEEeCCCcEEEEeCCCC
Q 010759 442 GEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~~~~~ 462 (502)
.++++ |+.-+|+|..++.+
T Consensus 217 ~~LVI--GW~d~v~i~~I~~~ 235 (846)
T KOG2066|consen 217 DRLVI--GWGDSVKICSIKKR 235 (846)
T ss_pred CeEEE--ecCCeEEEEEEecc
Confidence 55443 44457898888743
No 316
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.48 E-value=5.1e-05 Score=76.37 Aligned_cols=172 Identities=10% Similarity=0.139 Sum_probs=103.3
Q ss_pred CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCC
Q 010759 317 NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNN 396 (502)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~ 396 (502)
+.+.+.|..+.+...++.- .+....++++|+|+++++.+.+. ..+..+..+...... ..+.|.+.+.....
T Consensus 215 ~~vSvID~etmeV~~qV~V-dgnpd~v~~spdGk~afvTsyNs-------E~G~tl~em~a~e~d-~~vvfni~~iea~v 285 (635)
T PRK02888 215 SLFTAVDAETMEVAWQVMV-DGNLDNVDTDYDGKYAFSTCYNS-------EEGVTLAEMMAAERD-WVVVFNIARIEEAV 285 (635)
T ss_pred EEEEEEECccceEEEEEEe-CCCcccceECCCCCEEEEeccCc-------ccCcceeeeccccCc-eEEEEchHHHHHhh
Confidence 4455556555443333221 12335678899999987776322 112222222111111 33444433211112
Q ss_pred CCCcEEEEEEeCCCeEEEEeCCC-----CeEEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCCCe-------
Q 010759 397 PNQQLILASASFDSTVKLWDVEL-----GKLLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGK------- 463 (502)
Q Consensus 397 ~~~~~~l~sgs~dg~i~iwd~~~-----~~~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~------- 463 (502)
++.+...+ .++.|.+.|..+ ...+..+. -......+.+||||+++++++ .+.+|.|.|+.+.+
T Consensus 286 kdGK~~~V---~gn~V~VID~~t~~~~~~~v~~yIP-VGKsPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~ 361 (635)
T PRK02888 286 KAGKFKTI---GGSKVPVVDGRKAANAGSALTRYVP-VPKNPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKI 361 (635)
T ss_pred hCCCEEEE---CCCEEEEEECCccccCCcceEEEEE-CCCCccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccC
Confidence 22223333 257899999988 34454444 344568899999999887655 58999999998754
Q ss_pred -----eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 -----IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 -----~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++....-.-+....+|.++|+...+.+.|..|..||+.
T Consensus 362 ~~~~~vvaevevGlGPLHTaFDg~G~aytslf~dsqv~kwn~~ 404 (635)
T PRK02888 362 KPRDAVVAEPELGLGPLHTAFDGRGNAYTTLFLDSQIVKWNIE 404 (635)
T ss_pred CccceEEEeeccCCCcceEEECCCCCEEEeEeecceeEEEehH
Confidence 23333333345789999999999999999999999974
No 317
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.48 E-value=0.00051 Score=63.41 Aligned_cols=237 Identities=17% Similarity=0.156 Sum_probs=140.3
Q ss_pred eeEEEECCC-CCEEEEEeCCC-cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC-
Q 010759 157 VCACAWSPA-GSLLASGSGDS-TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY- 233 (502)
Q Consensus 157 V~~~~~spd-~~~l~sgs~D~-~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~- 233 (502)
.++++.+|. +..++-+-.-| .+.+||..++......... .-+++.+| -+||+||++|++.-.
T Consensus 7 gH~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a~-----~gRHFyGH----------g~fs~dG~~LytTEnd 71 (305)
T PF07433_consen 7 GHGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWAP-----PGRHFYGH----------GVFSPDGRLLYTTEND 71 (305)
T ss_pred ccceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcCC-----CCCEEecC----------EEEcCCCCEEEEeccc
Confidence 346788884 56666676655 4678888776532111000 01222222 479999999998744
Q ss_pred ----CCcEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecCC-------CeEEEEeccCcceeEEeeecccCeE
Q 010759 234 ----DGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-------KTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 234 ----dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-------~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
.|.|-|||... .....+..|.-.-..+.+.|+|..|+.+-.- |..++ |+.++
T Consensus 72 ~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR~kL-Nl~tM-------------- 136 (305)
T PF07433_consen 72 YETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGRAKL-NLDTM-------------- 136 (305)
T ss_pred cCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCceec-Chhhc--------------
Confidence 48999999873 3344677776666788899999888776321 11111 12222
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceee--e--cCCCcceeEEEEcCCCCEEEEEeCCCc-------EEEEeCCCC
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKT--F--AGHQGEVNCVKWDPTGSLLASCSDDVT-------AKIWNMKQD 369 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~--~--~~h~~~v~~v~~~p~~~~l~sgs~dg~-------i~iwd~~~~ 369 (502)
+-.+...+..++..+.. + .-|...|.-+++.++|..++.+-..|. +-+++ .+
T Consensus 137 ---------------~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~--~g 199 (305)
T PF07433_consen 137 ---------------QPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHR--RG 199 (305)
T ss_pred ---------------CCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEc--CC
Confidence 11222233333333322 2 225566777888887776665554442 22232 22
Q ss_pred ceeeec-------ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC
Q 010759 370 KYVHDL-------REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG 442 (502)
Q Consensus 370 ~~~~~~-------~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg 442 (502)
..+..+ ..-.+.+-+|++++++. .+.+|+-.-|.+.+||..+++.+....- .-+..|+-.+++
T Consensus 200 ~~~~~~~~p~~~~~~l~~Y~gSIa~~~~g~--------~ia~tsPrGg~~~~~d~~tg~~~~~~~l--~D~cGva~~~~~ 269 (305)
T PF07433_consen 200 GALRLLPAPEEQWRRLNGYIGSIAADRDGR--------LIAVTSPRGGRVAVWDAATGRLLGSVPL--PDACGVAPTDDG 269 (305)
T ss_pred CcceeccCChHHHHhhCCceEEEEEeCCCC--------EEEEECCCCCEEEEEECCCCCEeecccc--CceeeeeecCCc
Confidence 212212 22345688999998875 3567777889999999999998866542 235677777766
Q ss_pred CEEEEEeCC
Q 010759 443 EYLASGSLD 451 (502)
Q Consensus 443 ~~lasgs~D 451 (502)
|++|.+.-
T Consensus 270 -f~~ssG~G 277 (305)
T PF07433_consen 270 -FLVSSGQG 277 (305)
T ss_pred -eEEeCCCc
Confidence 66665543
No 318
>PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.45 E-value=0.00014 Score=67.03 Aligned_cols=203 Identities=18% Similarity=0.242 Sum_probs=130.7
Q ss_pred EEEEecCC-CCEEEEecCCCe-EEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC
Q 010759 258 FSLKWNKK-GDYLLTGSCDKT-AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 258 ~~l~~~~~-~~~l~sgs~D~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 335 (502)
..++.+|. ...++.+-.-|+ ..+||.++++....+.. .+-+.|.|
T Consensus 8 H~~a~~p~~~~avafaRRPG~~~~v~D~~~g~~~~~~~a---------------------------------~~gRHFyG 54 (305)
T PF07433_consen 8 HGVAAHPTRPEAVAFARRPGTFALVFDCRTGQLLQRLWA---------------------------------PPGRHFYG 54 (305)
T ss_pred cceeeCCCCCeEEEEEeCCCcEEEEEEcCCCceeeEEcC---------------------------------CCCCEEec
Confidence 45677784 445566666655 56788877765443321 11235667
Q ss_pred CCcceeEEEEcCCCCEEEEEeC-----CCcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCC--------CCCCCC-c
Q 010759 336 HQGEVNCVKWDPTGSLLASCSD-----DVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSG--------TNNPNQ-Q 400 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sgs~-----dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~--------~~~~~~-~ 400 (502)
| ..||+||++|++.=. .|.|-|||.. +-..+.++..+.-.-..+.+.|+|.. ..+|+. .
T Consensus 55 H------g~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~GIGPHel~l~pDG~tLvVANGGI~Thpd~GR 128 (305)
T PF07433_consen 55 H------GVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSHGIGPHELLLMPDGETLVVANGGIETHPDSGR 128 (305)
T ss_pred C------EEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCCCcChhhEEEcCCCCEEEEEcCCCccCcccCc
Confidence 7 579999999987643 4789999998 55666777766655667778888741 111111 1
Q ss_pred EEEEEEeCCCeEEEEeCCCCeEEEE--e--eCCCCCEEEEEECCCCCEEEEEeCCC-------cEEEEeCCCCeeEEEEe
Q 010759 401 LILASASFDSTVKLWDVELGKLLYS--L--NGHREPVYSLAFSPTGEYLASGSLDK-------SMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 401 ~~l~sgs~dg~i~iwd~~~~~~~~~--~--~~h~~~v~~l~~spdg~~lasgs~Dg-------~i~iw~~~~~~~~~~~~ 469 (502)
.-|=-...+.++.+.|..+|+.+.. + .-|..+|..|+++++|..++..-..| .|-++... ..+..+.
T Consensus 129 ~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lSiRHLa~~~~G~V~~a~Q~qg~~~~~~PLva~~~~g--~~~~~~~ 206 (305)
T PF07433_consen 129 AKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLSIRHLAVDGDGTVAFAMQYQGDPGDAPPLVALHRRG--GALRLLP 206 (305)
T ss_pred eecChhhcCCceEEEecCCCceeeeeecCccccccceeeEEecCCCcEEEEEecCCCCCccCCeEEEEcCC--Ccceecc
Confidence 1222334456677788888888765 5 34778999999999998877665544 24444433 3233332
Q ss_pred c--------CCCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 470 G--------NGGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 470 ~--------~~~i~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
. .+-+-+++++++|..+|+.+- .+++.|||..
T Consensus 207 ~p~~~~~~l~~Y~gSIa~~~~g~~ia~tsPrGg~~~~~d~~ 247 (305)
T PF07433_consen 207 APEEQWRRLNGYIGSIAADRDGRLIAVTSPRGGRVAVWDAA 247 (305)
T ss_pred CChHHHHhhCCceEEEEEeCCCCEEEEECCCCCEEEEEECC
Confidence 1 245789999999998766554 6678999753
No 319
>PRK11138 outer membrane biogenesis protein BamB; Provisional
Probab=98.44 E-value=8.1e-05 Score=73.90 Aligned_cols=258 Identities=9% Similarity=0.035 Sum_probs=144.8
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCC---------C-CE-EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHK---------G-PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~---------~-~V-~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
+..++.++.+|.+..+|.. ++......-.. . .+ ..+.. .+..++.++.++.+..+|..+++..-.+
T Consensus 69 ~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v--~~~~v~v~~~~g~l~ald~~tG~~~W~~ 146 (394)
T PRK11138 69 YNKVYAADRAGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTV--AGGKVYIGSEKGQVYALNAEDGEVAWQT 146 (394)
T ss_pred CCEEEEECCCCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEE--ECCEEEEEcCCCEEEEEECCCCCCcccc
Confidence 4456666677777777754 44433322111 0 00 00111 3467888889999999999999866554
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce-----eEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-----NCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
..... +.+--...+..++....++.++.+|..+++.+-.+......+ .+... .+..++.++.+|.+..+|..
T Consensus 147 ~~~~~-~~ssP~v~~~~v~v~~~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~sP~v--~~~~v~~~~~~g~v~a~d~~ 223 (394)
T PRK11138 147 KVAGE-ALSRPVVSDGLVLVHTSNGMLQALNESDGAVKWTVNLDVPSLTLRGESAPAT--AFGGAIVGGDNGRVSAVLME 223 (394)
T ss_pred cCCCc-eecCCEEECCEEEEECCCCEEEEEEccCCCEeeeecCCCCcccccCCCCCEE--ECCEEEEEcCCCEEEEEEcc
Confidence 43221 111000112345556678888888888877654443211000 11111 12356667788999989988
Q ss_pred CCceeeecccCCC----c---EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 368 QDKYVHDLREHSK----E---IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 368 ~~~~~~~~~~~~~----~---i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
+++.+-....... . ...+.-+|-- .+ . .+..++.+|.+..+|..+|+.++...-. ....+..
T Consensus 224 ~G~~~W~~~~~~~~~~~~~~~~~~~~~sP~v-----~~-~-~vy~~~~~g~l~ald~~tG~~~W~~~~~--~~~~~~~-- 292 (394)
T PRK11138 224 QGQLIWQQRISQPTGATEIDRLVDVDTTPVV-----VG-G-VVYALAYNGNLVALDLRSGQIVWKREYG--SVNDFAV-- 292 (394)
T ss_pred CChhhheeccccCCCccchhcccccCCCcEE-----EC-C-EEEEEEcCCeEEEEECCCCCEEEeecCC--CccCcEE--
Confidence 8876543321100 0 0000011100 01 1 3445667899999999999988765421 1112222
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCC-EEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGG-IFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~-i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+..|..++.+|.|..++..+|+.+..... ... ..+... .+.+|.++..+|.|+++|.
T Consensus 293 ~~~~vy~~~~~g~l~ald~~tG~~~W~~~~~~~~~~~sp~v--~~g~l~v~~~~G~l~~ld~ 352 (394)
T PRK11138 293 DGGRIYLVDQNDRVYALDTRGGVELWSQSDLLHRLLTAPVL--YNGYLVVGDSEGYLHWINR 352 (394)
T ss_pred ECCEEEEEcCCCeEEEEECCCCcEEEcccccCCCcccCCEE--ECCEEEEEeCCCEEEEEEC
Confidence 456777788899999999999987765432 111 111111 2567778888888888775
No 320
>KOG0882 consensus Cyclophilin-related peptidyl-prolyl cis-trans isomerase [Posttranslational modification, protein turnover, chaperones]
Probab=98.44 E-value=1.7e-06 Score=81.29 Aligned_cols=202 Identities=16% Similarity=0.143 Sum_probs=138.3
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCC---CcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCc
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---NRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDK 370 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~~~~ 370 (502)
|...+..+-..-...+++++.|+.+..|.-.. -.-++.+..|.+.|.+++.+-+|.++.|.+. |..++++|+.+-.
T Consensus 8 hrd~i~hv~~tka~fiiqASlDGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDvEn~D 87 (558)
T KOG0882|consen 8 HRDVITHVFPTKAKFIIQASLDGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDVENFD 87 (558)
T ss_pred ccceeeeEeeehhheEEeeecchhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEeeccc
Confidence 33444444444455678899999999997543 1234556788899999999999999999888 9999999987654
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--eEEEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--KLLYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--~~~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
.+.-++...-+-.+-.+...|... ..+.++.-.+|.|.++|-... +..+.-.-|..+|..+.++|-+..+++.
T Consensus 88 minmiKL~~lPg~a~wv~skGd~~-----s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSi 162 (558)
T KOG0882|consen 88 MINMIKLVDLPGFAEWVTSKGDKI-----SLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSI 162 (558)
T ss_pred hhhhcccccCCCceEEecCCCCee-----eeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeec
Confidence 432222211111111111112100 023344556889999997643 3344555689999999999999999999
Q ss_pred eCCCcEEEEeCCC------CeeEEEEe----------cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 449 SLDKSMHIWSLKE------GKIVKTYT----------GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 449 s~Dg~i~iw~~~~------~~~~~~~~----------~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
...|.|.-|.... ..+...+. ......+++|+|+|..+++-..|..|++++++
T Consensus 163 D~~gmVEyWs~e~~~qfPr~~l~~~~K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~K 231 (558)
T KOG0882|consen 163 DISGMVEYWSAEGPFQFPRTNLNFELKHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFK 231 (558)
T ss_pred cccceeEeecCCCcccCccccccccccccchhhcccccccCccceEEccccCcccccCcccEEEEEEec
Confidence 8899999999872 22222221 23446789999999999999999999999886
No 321
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=98.44 E-value=2e-05 Score=79.70 Aligned_cols=106 Identities=25% Similarity=0.449 Sum_probs=79.9
Q ss_pred EEECCCCCEEEEEe----CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 160 CAWSPAGSLLASGS----GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 160 ~~~spd~~~l~sgs----~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
.+|+|...++|.++ .-|.|-||- .+|.... .+ ...-.+++++|+|..-.|++|-.-|
T Consensus 21 ~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr-------------~V-----t~P~hatSLCWHpe~~vLa~gwe~g 81 (1416)
T KOG3617|consen 21 SSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQR-------------DV-----TYPVHATSLCWHPEEFVLAQGWEMG 81 (1416)
T ss_pred cccCCCCceeEEEEecCCCCceEEEEe-cCCCCCc-------------cc-----ccceehhhhccChHHHHHhhccccc
Confidence 46888888888776 346777773 2232110 00 0012367799999999999999999
Q ss_pred cEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc
Q 010759 236 QARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 236 ~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~ 284 (502)
.+.+|..+..... ....|+.+|..+.|+++|+.++++..-|.|.+|...
T Consensus 82 ~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 82 VSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred eeEEEecCCceeeeeccCCCCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 9999998765444 446799999999999999999999999999999754
No 322
>KOG4714 consensus Nucleoporin [Nuclear structure]
Probab=98.42 E-value=1.7e-06 Score=75.68 Aligned_cols=163 Identities=13% Similarity=0.159 Sum_probs=100.0
Q ss_pred ceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee-ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe
Q 010759 329 PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS 407 (502)
Q Consensus 329 ~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs 407 (502)
+...+.-|+++-.+-+.+..++-++++..||.+-+++.+....+. .+........+.++...+. ++.++.
T Consensus 81 ~~~~~a~~sep~p~~~~s~~~t~V~~~~~dg~~~v~s~~~~~~~~~~i~~~~~~~as~~~~~~~~---------~i~s~~ 151 (319)
T KOG4714|consen 81 PFKVLAKNSEIDPNDACTMTDNRVCIGYADGSLAVFSTDKDLALMSRIPSIHSGSASRKICRHGN---------SILSGG 151 (319)
T ss_pred ceeeeeccCCCCCcccccccCCceEecCCCceEEEEechHHHhhhhhcccccccccccceeeccc---------EEecCC
Confidence 344555566665566666677889999999999999876521111 0100000111111111221 232222
Q ss_pred -----CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEE--ecCCCEEEEEE
Q 010759 408 -----FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTY--TGNGGIFEVCW 479 (502)
Q Consensus 408 -----~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~--~~~~~i~~~~w 479 (502)
.-+..+.|+++..+.+..-......|++++-+|.- ..+++|+.||.+-+||.+.......+ .++..|+.+-|
T Consensus 152 ~g~~n~~d~~~a~~~~p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~F 231 (319)
T KOG4714|consen 152 CGNWNAQDNFYANTLDPIKTLIPSKKALDAVTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKAEIWEVHF 231 (319)
T ss_pred cceEeeccceeeecccccccccccccccccchhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhhhhhheec
Confidence 12345566655333222111122349999999975 45678889999999999987554333 24567999999
Q ss_pred CCC-CCEEEEEECCCeEEEEEe
Q 010759 480 NKE-GDKIAACFANHTVCVLDF 500 (502)
Q Consensus 480 s~~-g~~la~~~~~~~v~v~~~ 500 (502)
+|. +.+|.+|+.||.+.-||.
T Consensus 232 Hpk~p~~Lft~sedGslw~wda 253 (319)
T KOG4714|consen 232 HPKNPEHLFTCSEDGSLWHWDA 253 (319)
T ss_pred cCCCchheeEecCCCcEEEEcC
Confidence 995 689999999999999885
No 323
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=98.38 E-value=0.00069 Score=66.12 Aligned_cols=288 Identities=15% Similarity=0.218 Sum_probs=146.9
Q ss_pred CCCCCEEEEEe---------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 163 SPAGSLLASGS---------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 163 spd~~~l~sgs---------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
|||+++++... ..+.+.|||+.++... .+.. ....+....|||+|+.++-..
T Consensus 1 S~d~~~~l~~~~~~~~~r~s~~~~y~i~d~~~~~~~--------------~l~~----~~~~~~~~~~sP~g~~~~~v~- 61 (353)
T PF00930_consen 1 SPDGKFVLFATNYTKQWRHSFKGDYYIYDIETGEIT--------------PLTP----PPPKLQDAKWSPDGKYIAFVR- 61 (353)
T ss_dssp -TTSSEEEEEEEEEEESSSEEEEEEEEEETTTTEEE--------------ESS-----EETTBSEEEE-SSSTEEEEEE-
T ss_pred CCCCCeEEEEECcEEeeeeccceeEEEEecCCCceE--------------ECcC----CccccccceeecCCCeeEEEe-
Confidence 68888776632 2356778888765321 1100 034578899999999988875
Q ss_pred CCcEEEEECCCceeEeecCCC------------------CCEEEEEecCCCCEEEEecCC-CeEEEEecc---CcceeEE
Q 010759 234 DGQARIWSTNGDLKCTLSKHK------------------GPIFSLKWNKKGDYLLTGSCD-KTAIVWDVK---TEEWKQQ 291 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~------------------~~V~~l~~~~~~~~l~sgs~D-~~v~iwd~~---~~~~~~~ 291 (502)
++.|.+++..+.....+.... +.-.++-|+|++++|+....| ..|+.+.+- ...-
T Consensus 62 ~~nly~~~~~~~~~~~lT~dg~~~i~nG~~dwvyeEEv~~~~~~~~WSpd~~~la~~~~d~~~v~~~~~~~~~~~~~--- 138 (353)
T PF00930_consen 62 DNNLYLRDLATGQETQLTTDGEPGIYNGVPDWVYEEEVFDRRSAVWWSPDSKYLAFLRFDEREVPEYPLPDYSPPDS--- 138 (353)
T ss_dssp TTEEEEESSTTSEEEESES--TTTEEESB--HHHHHHTSSSSBSEEE-TTSSEEEEEEEE-TTS-EEEEEEESSSTE---
T ss_pred cCceEEEECCCCCeEEeccccceeEEcCccceeccccccccccceEECCCCCEEEEEEECCcCCceEEeeccCCccc---
Confidence 578999986544333222111 112467799999998876554 334433321 1100
Q ss_pred eeecccCeEEEecCCCceEEEEc--CCCeEEEEEcCCCcceee--e---cCCCcceeEEEEcCCCCEEEE--EeCCC---
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSS--TDNMIYVCKIGENRPIKT--F---AGHQGEVNCVKWDPTGSLLAS--CSDDV--- 359 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~--~---~~h~~~v~~v~~~p~~~~l~s--gs~dg--- 359 (502)
.-..+..+.+... +. ..-.++++++.+++.... . ..-...+..+.|.+++..|+. ...+.
T Consensus 139 ---~yp~~~~~~YPk~-----G~~np~v~l~v~~~~~~~~~~~~~~~~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~ 210 (353)
T PF00930_consen 139 ---QYPEVESIRYPKA-----GDPNPRVSLFVVDLASGKTTELDPPNSLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRL 210 (353)
T ss_dssp ---SS-EEEEEE--BT-----TS---EEEEEEEESSSTCCCEE---HHHHTSSEEEEEEEEEETTEEEEEEEEETTSTEE
T ss_pred ---cCCcccccccCCC-----CCcCCceEEEEEECCCCcEEEeeeccccCCCccCcccceecCCCcEEEEEEcccCCCEE
Confidence 0000111111100 00 011356677766654221 1 233456889999999983333 33333
Q ss_pred cEEEEeCCCCceeeecccC-CCcE---EEEEEc-cCCCCCCCCCCcEEEEEEeCCCeEEEE--eCCCCeEEEEeeCCCCC
Q 010759 360 TAKIWNMKQDKYVHDLREH-SKEI---YTIRWS-PTGSGTNNPNQQLILASASFDSTVKLW--DVELGKLLYSLNGHREP 432 (502)
Q Consensus 360 ~i~iwd~~~~~~~~~~~~~-~~~i---~~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~iw--d~~~~~~~~~~~~h~~~ 432 (502)
.+.++|..++.....+... ...+ ....|. +++. .+|.....+|.-+|+ +...+. ...++...-.
T Consensus 211 ~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~--------~~l~~s~~~G~~hly~~~~~~~~-~~~lT~G~~~ 281 (353)
T PF00930_consen 211 DLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGN--------EFLWISERDGYRHLYLYDLDGGK-PRQLTSGDWE 281 (353)
T ss_dssp EEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSS--------EEEEEEETTSSEEEEEEETTSSE-EEESS-SSS-
T ss_pred EEEEEECCCCceeEEEEecCCcceeeecccccccCCCC--------EEEEEEEcCCCcEEEEEcccccc-eeccccCcee
Confidence 3556677665443222111 1111 123332 3332 244444477765554 555444 3456655566
Q ss_pred EEE-EEECCCCCEEE-EEeCC--C--cEEEEeCC-CCeeEEEEecCCC-EEEEEECCCCCEEEEEE
Q 010759 433 VYS-LAFSPTGEYLA-SGSLD--K--SMHIWSLK-EGKIVKTYTGNGG-IFEVCWNKEGDKIAACF 490 (502)
Q Consensus 433 v~~-l~~spdg~~la-sgs~D--g--~i~iw~~~-~~~~~~~~~~~~~-i~~~~ws~~g~~la~~~ 490 (502)
|+. +.|++++..|. +|..+ + .|..-++. .+. ++.++...+ .+.++|||+|++++...
T Consensus 282 V~~i~~~d~~~~~iyf~a~~~~p~~r~lY~v~~~~~~~-~~~LT~~~~~~~~~~~Spdg~y~v~~~ 346 (353)
T PF00930_consen 282 VTSILGWDEDNNRIYFTANGDNPGERHLYRVSLDSGGE-PKCLTCEDGDHYSASFSPDGKYYVDTY 346 (353)
T ss_dssp EEEEEEEECTSSEEEEEESSGGTTSBEEEEEETTETTE-EEESSTTSSTTEEEEE-TTSSEEEEEE
T ss_pred ecccceEcCCCCEEEEEecCCCCCceEEEEEEeCCCCC-eEeccCCCCCceEEEECCCCCEEEEEE
Confidence 755 67888876554 55543 2 45555556 444 444444333 26999999999887543
No 324
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.36 E-value=0.00015 Score=73.96 Aligned_cols=212 Identities=11% Similarity=0.097 Sum_probs=133.9
Q ss_pred EECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCC-EEEEEecCCCCEEEEecCCC-----eEEEEeccCcceeEEee
Q 010759 220 DWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGP-IFSLKWNKKGDYLLTGSCDK-----TAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 220 ~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~-V~~l~~~~~~~~l~sgs~D~-----~v~iwd~~~~~~~~~~~ 293 (502)
+|++.+..++.|+.+|.|.+.+..-.....+..+... |..+....+.++|++-+.|+ .++||++..-+--
T Consensus 30 c~~s~~~~vvigt~~G~V~~Ln~s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n---- 105 (933)
T KOG2114|consen 30 CCSSSTGSVVIGTADGRVVILNSSFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKN---- 105 (933)
T ss_pred EEcCCCceEEEeeccccEEEecccceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCC----
Confidence 4688899999999999999888665555667777666 55554444446788877765 4899998643200
Q ss_pred ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC--CCc-
Q 010759 294 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK--QDK- 370 (502)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~--~~~- 370 (502)
..| .++ +..+++... +.....++.+++.|.+-+.+|+|-.+|.|.++.-. ..+
T Consensus 106 --~sP-~c~--------------~~~ri~~~~-------np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrg 161 (933)
T KOG2114|consen 106 --NSP-QCL--------------YEHRIFTIK-------NPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRG 161 (933)
T ss_pred --CCc-cee--------------eeeeeeccC-------CCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccc
Confidence 000 000 001111110 11124568889999999999999999999988421 111
Q ss_pred -eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 371 -YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 371 -~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
...-......+|+.+++..++.. .++.+ ....|.+|.+....+ +..+..|..+++|-+|++...-+++|
T Consensus 162 sr~~~~~~~~~pITgL~~~~d~~s--------~lFv~-Tt~~V~~y~l~gr~p~~~~ld~~G~~lnCss~~~~t~qfIca 232 (933)
T KOG2114|consen 162 SRQDYSHRGKEPITGLALRSDGKS--------VLFVA-TTEQVMLYSLSGRTPSLKVLDNNGISLNCSSFSDGTYQFICA 232 (933)
T ss_pred cceeeeccCCCCceeeEEecCCce--------eEEEE-ecceeEEEEecCCCcceeeeccCCccceeeecCCCCccEEEe
Confidence 11111223568999999887763 22222 245799999884442 44577788899999998865534444
Q ss_pred eCCCcEEEEeCCCCeeEEEEe
Q 010759 449 SLDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 449 s~Dg~i~iw~~~~~~~~~~~~ 469 (502)
+. ..|.+|+....+.-.+|.
T Consensus 233 ~~-e~l~fY~sd~~~~cfaf~ 252 (933)
T KOG2114|consen 233 GS-EFLYFYDSDGRGPCFAFE 252 (933)
T ss_pred cC-ceEEEEcCCCcceeeeec
Confidence 43 359999987655555554
No 325
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.33 E-value=0.00037 Score=71.06 Aligned_cols=271 Identities=11% Similarity=0.086 Sum_probs=146.6
Q ss_pred CEEEEEECCCcEEEEECC-CceeEeecCCCC------CEE--EEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTLSKHKG------PIF--SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~------~V~--~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
..++.++.++.+...|.. ++.+..+..... .+. .+... ++..++.++.++.|..+|.++++.+-.+....
T Consensus 62 g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~TG~~~W~~~~~~ 140 (488)
T cd00216 62 GDMYFTTSHSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAETGKQVWKFGNND 140 (488)
T ss_pred CEEEEeCCCCcEEEEECCCChhhceeCCCCCccccccccccCCcEEc-cCCeEEEecCCCeEEEEECCCCCEeeeecCCC
Confidence 345566677888887764 333333322111 110 11111 22678888999999999999998766554322
Q ss_pred cC-----e-EEEecCCCceEEEE--------cCCCeEEEEEcCCCcceeeecCCC--------------------cce-e
Q 010759 297 GP-----T-LDVDWRNNVSFATS--------STDNMIYVCKIGENRPIKTFAGHQ--------------------GEV-N 341 (502)
Q Consensus 297 ~~-----~-~~~~~~~~~~~~~~--------~~d~~i~~~~~~~~~~~~~~~~h~--------------------~~v-~ 341 (502)
.. + ......+...++.+ ..++.++.+|..+++.+-.+.... ..+ .
T Consensus 141 ~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~g~~vw~ 220 (488)
T cd00216 141 QVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDRQMWGPGGGTSWA 220 (488)
T ss_pred CcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCcceecCCCCCccC
Confidence 10 0 00111123333322 235678888887776554432210 011 1
Q ss_pred EEEEcCCCCEEEEEeCCC------------------cEEEEeCCCCceeeecccCCCcEE--EEEEccCCCC--CCCCCC
Q 010759 342 CVKWDPTGSLLASCSDDV------------------TAKIWNMKQDKYVHDLREHSKEIY--TIRWSPTGSG--TNNPNQ 399 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg------------------~i~iwd~~~~~~~~~~~~~~~~i~--~~~~sp~g~~--~~~~~~ 399 (502)
..++.+.+.+++.++.++ .|.-+|..+++.+-.++....... .....|.-.. ......
T Consensus 221 ~pa~d~~~g~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~p~~~~~~~~~g~~ 300 (488)
T cd00216 221 SPTYDPKTNLVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQPSLADIKPKDGKP 300 (488)
T ss_pred CeeEeCCCCEEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCCCeEEeccccCCCe
Confidence 344555566777777665 688888888887655432111111 0000000000 000011
Q ss_pred cEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE-----------------EeCCCcEEEEeCCCC
Q 010759 400 QLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS-----------------GSLDKSMHIWSLKEG 462 (502)
Q Consensus 400 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las-----------------gs~Dg~i~iw~~~~~ 462 (502)
..+++.++.+|.+...|.++|+.++..... ...++.+| +...+. ...+|.|.-.|+.+|
T Consensus 301 ~~~V~~g~~~G~l~ald~~tG~~~W~~~~~---~~~~~~~~-~~vyv~~~~~~~~~~~~~~~~~~~~~~G~l~AlD~~tG 376 (488)
T cd00216 301 VPAIVHAPKNGFFYVLDRTTGKLISARPEV---EQPMAYDP-GLVYLGAFHIPLGLPPQKKKRCKKPGKGGLAALDPKTG 376 (488)
T ss_pred eEEEEEECCCceEEEEECCCCcEeeEeEee---ccccccCC-ceEEEccccccccCcccccCCCCCCCceEEEEEeCCCC
Confidence 125677889999999999999999876421 11234445 222221 124678999999999
Q ss_pred eeEEEEecC---------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 463 KIVKTYTGN---------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 463 ~~~~~~~~~---------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+...... .....-..-..+..|.+++.+|.|+.+|.+
T Consensus 377 ~~~W~~~~~~~~~~~~~g~~~~~~~~~~~g~~v~~g~~dG~l~ald~~ 424 (488)
T cd00216 377 KVVWEKREGTIRDSWNIGFPHWGGSLATAGNLVFAGAADGYFRAFDAT 424 (488)
T ss_pred cEeeEeeCCccccccccCCcccCcceEecCCeEEEECCCCeEEEEECC
Confidence 988776533 111110111256788888889998888753
No 326
>cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases. The alignment model contains an 8-bladed beta-propeller.
Probab=98.29 E-value=0.0036 Score=63.84 Aligned_cols=295 Identities=14% Similarity=0.158 Sum_probs=157.8
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE--EEEECCCCCEEEEEECCCcEEEEECC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT--TLDWNGEGTLLATGSYDGQARIWSTN 243 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--~l~~s~~~~~l~sg~~dg~i~iw~~~ 243 (502)
+..++.++.++.|.-.|..+++.......... .......+. .++.. ++..++.++.++.|..+|..
T Consensus 61 ~g~vy~~~~~g~l~AlD~~tG~~~W~~~~~~~-----------~~~~~~~~~~~g~~~~-~~~~V~v~~~~g~v~AlD~~ 128 (488)
T cd00216 61 DGDMYFTTSHSALFALDAATGKVLWRYDPKLP-----------ADRGCCDVVNRGVAYW-DPRKVFFGTFDGRLVALDAE 128 (488)
T ss_pred CCEEEEeCCCCcEEEEECCCChhhceeCCCCC-----------ccccccccccCCcEEc-cCCeEEEecCCCeEEEEECC
Confidence 45566777789999889888765432211100 000000000 01111 22567778889999999975
Q ss_pred -CceeEeecCCCC--CEEEEEecC--CCCEEEEec---------CCCeEEEEeccCcceeEEeeecccCe----------
Q 010759 244 -GDLKCTLSKHKG--PIFSLKWNK--KGDYLLTGS---------CDKTAIVWDVKTEEWKQQFEFHSGPT---------- 299 (502)
Q Consensus 244 -~~~~~~~~~h~~--~V~~l~~~~--~~~~l~sgs---------~D~~v~iwd~~~~~~~~~~~~~~~~~---------- 299 (502)
++.+..+..... .-+.+.-+| .+..++.++ .++.+..+|..+++.+-.+.......
T Consensus 129 TG~~~W~~~~~~~~~~~~~i~ssP~v~~~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~~~~~~~~~~~~~~~~~ 208 (488)
T cd00216 129 TGKQVWKFGNNDQVPPGYTMTGAPTIVKKLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFYTTEPDPNAFPTWGPDR 208 (488)
T ss_pred CCCEeeeecCCCCcCcceEecCCCEEECCEEEEeccccccccCCCCcEEEEEECCCCceeeEeeccCCCcCCCCCCCCCc
Confidence 455444432211 001111111 123455554 46889999999998766554421110
Q ss_pred -------------EEEecCCCceEEEEcCC------------------CeEEEEEcCCCcceeeec--CCCcc---e-eE
Q 010759 300 -------------LDVDWRNNVSFATSSTD------------------NMIYVCKIGENRPIKTFA--GHQGE---V-NC 342 (502)
Q Consensus 300 -------------~~~~~~~~~~~~~~~~d------------------~~i~~~~~~~~~~~~~~~--~h~~~---v-~~ 342 (502)
..++...+ .++.++.+ +.++.+|..+++.+-.+. .|... . ..
T Consensus 209 ~~~~~~g~~vw~~pa~d~~~g-~V~vg~~~g~~~~~~~~~~~~~~~~~~~l~Ald~~tG~~~W~~~~~~~~~~~~~~~s~ 287 (488)
T cd00216 209 QMWGPGGGTSWASPTYDPKTN-LVYVGTGNGSPWNWGGRRTPGDNLYTDSIVALDADTGKVKWFYQTTPHDLWDYDGPNQ 287 (488)
T ss_pred ceecCCCCCccCCeeEeCCCC-EEEEECCCCCCCccCCccCCCCCCceeeEEEEcCCCCCEEEEeeCCCCCCcccccCCC
Confidence 11111122 23333333 268888887777654432 12100 0 00
Q ss_pred EEEc----CCCC---EEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE----------
Q 010759 343 VKWD----PTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS---------- 405 (502)
Q Consensus 343 v~~~----p~~~---~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s---------- 405 (502)
..+. -++. .++.++.+|.+...|..+++.+-...... ..+..+| + ..++.+
T Consensus 288 p~~~~~~~~~g~~~~~V~~g~~~G~l~ald~~tG~~~W~~~~~~---~~~~~~~-~--------~vyv~~~~~~~~~~~~ 355 (488)
T cd00216 288 PSLADIKPKDGKPVPAIVHAPKNGFFYVLDRTTGKLISARPEVE---QPMAYDP-G--------LVYLGAFHIPLGLPPQ 355 (488)
T ss_pred CeEEeccccCCCeeEEEEEECCCceEEEEECCCCcEeeEeEeec---cccccCC-c--------eEEEccccccccCccc
Confidence 0111 1333 57888899999999999998775432210 0111222 1 111111
Q ss_pred ------EeCCCeEEEEeCCCCeEEEEeeCCC--------CCE--EEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe
Q 010759 406 ------ASFDSTVKLWDVELGKLLYSLNGHR--------EPV--YSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 406 ------gs~dg~i~iwd~~~~~~~~~~~~h~--------~~v--~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~ 469 (502)
...+|.|.-.|+.+|+.+++..... .+. ..+.. .+.+|+.++.||.|+.+|..+|+++..+.
T Consensus 356 ~~~~~~~~~~G~l~AlD~~tG~~~W~~~~~~~~~~~~~g~~~~~~~~~~--~g~~v~~g~~dG~l~ald~~tG~~lW~~~ 433 (488)
T cd00216 356 KKKRCKKPGKGGLAALDPKTGKVVWEKREGTIRDSWNIGFPHWGGSLAT--AGNLVFAGAADGYFRAFDATTGKELWKFR 433 (488)
T ss_pred ccCCCCCCCceEEEEEeCCCCcEeeEeeCCccccccccCCcccCcceEe--cCCeEEEECCCCeEEEEECCCCceeeEEE
Confidence 2246789999999999988765321 111 11222 45688889999999999999999998887
Q ss_pred cCCCEEE--EEECCCCCEEE
Q 010759 470 GNGGIFE--VCWNKEGDKIA 487 (502)
Q Consensus 470 ~~~~i~~--~~ws~~g~~la 487 (502)
..+.+.+ +.+..+|+..+
T Consensus 434 ~~~~~~a~P~~~~~~g~~yv 453 (488)
T cd00216 434 TPSGIQATPMTYEVNGKQYV 453 (488)
T ss_pred CCCCceEcCEEEEeCCEEEE
Confidence 6554432 33555665333
No 327
>KOG1645 consensus RING-finger-containing E3 ubiquitin ligase [Posttranslational modification, protein turnover, chaperones]
Probab=98.29 E-value=3.8e-05 Score=71.48 Aligned_cols=241 Identities=12% Similarity=0.153 Sum_probs=138.6
Q ss_pred eecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC-CC-ceEEEEcCCCeEEEEEcC
Q 010759 249 TLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR-NN-VSFATSSTDNMIYVCKIG 325 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~d~~i~~~~~~ 325 (502)
.+.+|...|..++|+|..+ .+..++.+.+|+|.|+++..++..+..+ .++.++.|. +. ..+..+-..|.|+++|++
T Consensus 188 ~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R 266 (463)
T KOG1645|consen 188 ILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMR 266 (463)
T ss_pred cccccchhhhhhccCccccceeeeeccCceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEcc
Confidence 5677888999999999887 6788999999999999999988888877 667777774 33 345566788999999998
Q ss_pred CCc-ceeeecC--CCcceeEE------EEcCCCCEEEEEeCCCcEEEEeCCC--Cceeeecc-cCCCcEEEEEEccCCCC
Q 010759 326 ENR-PIKTFAG--HQGEVNCV------KWDPTGSLLASCSDDVTAKIWNMKQ--DKYVHDLR-EHSKEIYTIRWSPTGSG 393 (502)
Q Consensus 326 ~~~-~~~~~~~--h~~~v~~v------~~~p~~~~l~sgs~dg~i~iwd~~~--~~~~~~~~-~~~~~i~~~~~sp~g~~ 393 (502)
... ++..+.+ ...+|..+ ..++.|.+++..+.+ +..|.+.- +.....+. +..+.+.+..+.+-..
T Consensus 267 ~~~~~~~e~~a~~t~~pv~~i~~~~~n~~f~~gglLv~~lt~--l~f~ei~~s~~~~p~vlele~pG~cismqy~~~sn- 343 (463)
T KOG1645|consen 267 QPEGPLMELVANVTINPVHKIAPVQPNKIFTSGGLLVFALTV--LQFYEIVFSAECLPCVLELEPPGICISMQYHGVSN- 343 (463)
T ss_pred CCCchHhhhhhhhccCcceeecccCccccccccceEEeeehh--hhhhhhhccccCCCcccccCCCcceeeeeecCccc-
Confidence 653 3333322 12233333 233445566555443 44565431 11111111 1233344444333221
Q ss_pred CCCCCCcEEEEEEeCCCe---EE----EEeCCCCeEEEEe-eCCCC-------CEEEEEECCCCCEEEE-EeCCCcEEEE
Q 010759 394 TNNPNQQLILASASFDST---VK----LWDVELGKLLYSL-NGHRE-------PVYSLAFSPTGEYLAS-GSLDKSMHIW 457 (502)
Q Consensus 394 ~~~~~~~~~l~sgs~dg~---i~----iwd~~~~~~~~~~-~~h~~-------~v~~l~~spdg~~las-gs~Dg~i~iw 457 (502)
.+|+|.-.+-+ ++ --|-..|..+..- .+|.+ .-..+.-.++.++|+. |..-+.+.+|
T Consensus 344 -------h~l~tyRs~pn~p~~r~il~~~d~~dG~pVc~~r~~~~Gs~~~kl~t~~ai~~~~~nn~iv~~gd~tn~lil~ 416 (463)
T KOG1645|consen 344 -------HLLLTYRSNPNFPQSRFILGRIDFRDGFPVCGKRRTYFGSKQTKLSTTQAIRAVEDNNYIVVVGDSTNELILQ 416 (463)
T ss_pred -------eEEEEecCCCCCccceeeeeeeccccCceeeeecccccCCcccccccccceeccccccEEEEecCCcceeEEe
Confidence 13333221100 00 0111223222211 11100 0011222455566654 5556889999
Q ss_pred eCCCCeeEEEEecCCCEEEEEEC-CCCCEEEEEECCCeEEEEEe
Q 010759 458 SLKEGKIVKTYTGNGGIFEVCWN-KEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 458 ~~~~~~~~~~~~~~~~i~~~~ws-~~g~~la~~~~~~~v~v~~~ 500 (502)
|+.++++++++.-+..|.+++.. ..|.-+.+...|..++||-.
T Consensus 417 D~~s~evvQ~l~~~epv~Dicp~~~n~~syLa~LTd~~v~Iyk~ 460 (463)
T KOG1645|consen 417 DPHSFEVVQTLALSEPVLDICPNDTNGSSYLALLTDDRVHIYKN 460 (463)
T ss_pred ccchhheeeecccCcceeecceeecCCcchhhheecceEEEEec
Confidence 99999999999988889988854 45554444444557888753
No 328
>PRK02888 nitrous-oxide reductase; Validated
Probab=98.27 E-value=0.0006 Score=68.87 Aligned_cols=133 Identities=15% Similarity=0.139 Sum_probs=90.0
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCC----C-ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 345 WDPTGSLLASCSDDVTAKIWNMKQ----D-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg~i~iwd~~~----~-~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
+.++|++... .+++|.+.|..+ + ..+..+ .-......+.++|+|. ++++++..+++|.+.|+.+
T Consensus 284 ~vkdGK~~~V--~gn~V~VID~~t~~~~~~~v~~yI-PVGKsPHGV~vSPDGk--------ylyVanklS~tVSVIDv~k 352 (635)
T PRK02888 284 AVKAGKFKTI--GGSKVPVVDGRKAANAGSALTRYV-PVPKNPHGVNTSPDGK--------YFIANGKLSPTVTVIDVRK 352 (635)
T ss_pred hhhCCCEEEE--CCCEEEEEECCccccCCcceEEEE-ECCCCccceEECCCCC--------EEEEeCCCCCcEEEEEChh
Confidence 3457776655 367899999887 3 333333 3445667888899886 5777788899999999987
Q ss_pred CeE------------EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CeeEEEEecCCCEEEE
Q 010759 420 GKL------------LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE----------GKIVKTYTGNGGIFEV 477 (502)
Q Consensus 420 ~~~------------~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~----------~~~~~~~~~~~~i~~~ 477 (502)
.+. +.+..--.+| ...+|.++|....|---|..|..|++.+ ..+++.+.-+..+-.+
T Consensus 353 ~k~~~~~~~~~~~~vvaevevGlGP-LHTaFDg~G~aytslf~dsqv~kwn~~~a~~~~~g~~~~~v~~k~dV~y~pgh~ 431 (635)
T PRK02888 353 LDDLFDGKIKPRDAVVAEPELGLGP-LHTAFDGRGNAYTTLFLDSQIVKWNIEAAIRAYKGEKVDPIVQKLDVHYQPGHN 431 (635)
T ss_pred hhhhhhccCCccceEEEeeccCCCc-ceEEECCCCCEEEeEeecceeEEEehHHHHHHhccccCCcceecccCCCcccee
Confidence 553 2333222233 4678999999888888999999999876 2344444333333333
Q ss_pred E------ECCCCCEEEEE
Q 010759 478 C------WNKEGDKIAAC 489 (502)
Q Consensus 478 ~------ws~~g~~la~~ 489 (502)
. -.|||++|++.
T Consensus 432 ~~~~g~t~~~dgk~l~~~ 449 (635)
T PRK02888 432 HASMGETKEADGKWLVSL 449 (635)
T ss_pred eecCCCcCCCCCCEEEEc
Confidence 3 37899988876
No 329
>KOG2114 consensus Vacuolar assembly/sorting protein PEP5/VPS11 [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.18 E-value=0.00035 Score=71.37 Aligned_cols=189 Identities=12% Similarity=0.186 Sum_probs=119.8
Q ss_pred eeccccccceeEEEECCCC-CEEEEEeCCC-----cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 148 TILEGHTSEVCACAWSPAG-SLLASGSGDS-----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~-~~l~sgs~D~-----~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+-++.|..+|-..-+.-++ .+|++-+.|+ .++||++..-..... |..+...+.+....+....++.+++.
T Consensus 58 ~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~s----P~c~~~~ri~~~~np~~~~p~s~l~V 133 (933)
T KOG2114|consen 58 RGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNS----PQCLYEHRIFTIKNPTNPSPASSLAV 133 (933)
T ss_pred ehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCC----cceeeeeeeeccCCCCCCCcceEEEE
Confidence 3455666663333344444 6888888775 499999875432211 33333333333222234678999999
Q ss_pred CCCCCEEEEEECCCcEEEEECC-----CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc-eeEEeeec
Q 010759 222 NGEGTLLATGSYDGQARIWSTN-----GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFH 295 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~-----~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~ 295 (502)
|.+-+.++.|-.+|.|.++.-+ +.........+.+|+++.+..++..++-...-..|.+|.+.... ....+..+
T Consensus 134 s~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l~gr~p~~~~ld~~ 213 (933)
T KOG2114|consen 134 SEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSLSGRTPSLKVLDNN 213 (933)
T ss_pred EccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEecCCCcceeeeccC
Confidence 9999999999999999998532 11112223456799999999988774444445689999987444 23446666
Q ss_pred ccCeEEEecCCCce-EEEEcCCCeEEEEEcCCCcceeeec-CCCccee
Q 010759 296 SGPTLDVDWRNNVS-FATSSTDNMIYVCKIGENRPIKTFA-GHQGEVN 341 (502)
Q Consensus 296 ~~~~~~~~~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~ 341 (502)
..+..+..+.+... |+.+ .+..+++++....++...|. ||...+.
T Consensus 214 G~~lnCss~~~~t~qfIca-~~e~l~fY~sd~~~~cfaf~~g~kk~~~ 260 (933)
T KOG2114|consen 214 GISLNCSSFSDGTYQFICA-GSEFLYFYDSDGRGPCFAFEVGEKKEML 260 (933)
T ss_pred CccceeeecCCCCccEEEe-cCceEEEEcCCCcceeeeecCCCeEEEE
Confidence 77777777755544 5544 34568888887776666665 5554443
No 330
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.14 E-value=0.00054 Score=67.77 Aligned_cols=141 Identities=21% Similarity=0.240 Sum_probs=85.0
Q ss_pred EEEEcCCCCEEE-EEeCCCcE--EEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe--EEEEe
Q 010759 342 CVKWDPTGSLLA-SCSDDVTA--KIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST--VKLWD 416 (502)
Q Consensus 342 ~v~~~p~~~~l~-sgs~dg~i--~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~--i~iwd 416 (502)
..+|+|||+.|+ +...||.. .+.|+.++... .+....+.-..-.|+|+|+ .++++.+..|. |.+.+
T Consensus 242 ~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~~~-~Lt~~~gi~~~Ps~spdG~--------~ivf~Sdr~G~p~I~~~~ 312 (425)
T COG0823 242 APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKNLP-RLTNGFGINTSPSWSPDGS--------KIVFTSDRGGRPQIYLYD 312 (425)
T ss_pred CccCCCCCCEEEEEECCCCCccEEEEcCCCCcce-ecccCCccccCccCCCCCC--------EEEEEeCCCCCcceEEEC
Confidence 467999998765 45567764 45566655532 2333333333456777775 45666666665 45556
Q ss_pred CCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC-Cc--EEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 417 VELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-KS--MHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 417 ~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-g~--i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
++.+.. ..+......-..-.|||||.+|+..+.. |. |.+.++.++..++.+.........+|.|+|+.+...+..
T Consensus 313 ~~g~~~-~riT~~~~~~~~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~lt~~~~~e~ps~~~ng~~i~~~s~~ 390 (425)
T COG0823 313 LEGSQV-TRLTFSGGGNSNPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRILTSTYLNESPSWAPNGRMIMFSSGQ 390 (425)
T ss_pred CCCCce-eEeeccCCCCcCccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEccccccCCCCCcCCCCceEEEeccC
Confidence 554443 3333332222367899999999877643 44 777777665545555554445567788888877665544
No 331
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=98.10 E-value=3.7e-05 Score=75.49 Aligned_cols=72 Identities=17% Similarity=0.202 Sum_probs=61.3
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.....|.+.+++|+...|+.|+.||+|.+||...+....+ ...-.+..++|||+|..+++|+..|.+.+||.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~~~-ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ 328 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTLLA-KAEFIPTLIAWHPDGAIFVVGSEQGELQCFDM 328 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeeeee-eecccceEEEEcCCCcEEEEEcCCceEEEEEe
Confidence 3667899999999999999999999999999877643322 33345689999999999999999999999996
No 332
>COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion]
Probab=98.08 E-value=0.00015 Score=71.56 Aligned_cols=145 Identities=23% Similarity=0.252 Sum_probs=91.5
Q ss_pred CcceeEEEEcCCCCEEEEEe---CC-CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeE
Q 010759 337 QGEVNCVKWDPTGSLLASCS---DD-VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 412 (502)
Q Consensus 337 ~~~v~~v~~~p~~~~l~sgs---~d-g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i 412 (502)
...+...+|+|++..++..+ .. ..+.++++.+++....+. ..+.-...+|+|+|+ .++++...||..
T Consensus 192 ~~~~~~p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~-~~g~~~~P~fspDG~--------~l~f~~~rdg~~ 262 (425)
T COG0823 192 GSLILTPAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILN-FNGNNGAPAFSPDGS--------KLAFSSSRDGSP 262 (425)
T ss_pred CcceeccccCcCCCceEEEEEecCCCceEEEEeccCCccceeec-cCCccCCccCCCCCC--------EEEEEECCCCCc
Confidence 34566788999998755442 12 358888988876543332 223334557888885 467777778765
Q ss_pred --EEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeC-CC--cEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEE
Q 010759 413 --KLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL-DK--SMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKI 486 (502)
Q Consensus 413 --~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~-Dg--~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~l 486 (502)
.+.|+..+. +..+..-.+.-+.=.|+|||++|+-.+. .| .|.+.++..+.. ..++. .+.-....|||||++|
T Consensus 263 ~iy~~dl~~~~-~~~Lt~~~gi~~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~~p~~SpdG~~i 340 (425)
T COG0823 263 DIYLMDLDGKN-LPRLTNGFGINTSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNSNPVWSPDGDKI 340 (425)
T ss_pred cEEEEcCCCCc-ceecccCCccccCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCcCccCCCCCCEE
Confidence 555776655 3335433333345689999999986654 44 466666665554 33322 2222377899999999
Q ss_pred EEEECC
Q 010759 487 AACFAN 492 (502)
Q Consensus 487 a~~~~~ 492 (502)
|..+..
T Consensus 341 ~~~~~~ 346 (425)
T COG0823 341 VFESSS 346 (425)
T ss_pred EEEecc
Confidence 998854
No 333
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=98.03 E-value=0.023 Score=58.29 Aligned_cols=76 Identities=17% Similarity=0.389 Sum_probs=50.5
Q ss_pred CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEE--EEECCCCCEE
Q 010759 410 STVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFE--VCWNKEGDKI 486 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~--~~ws~~g~~l 486 (502)
|.|.-+|+.+++.+++.........+. ..-.+.+++.++.||.++.+|.++|+.+..+...+.+.+ +.|.-+|+..
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~-l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~~~g~~~~a~P~ty~~~G~qY 518 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGV-LATAGDLVFYGTLEGYFKAFDAKTGEELWKFKTGSGIVGPPVTYEQDGKQY 518 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcc-eEECCcEEEEECCCCeEEEEECCCCCEeEEEeCCCCceecCEEEEeCCEEE
Confidence 568889999999988765322111111 111345677788899999999999999988765554432 4445677633
No 334
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=98.01 E-value=0.015 Score=55.67 Aligned_cols=271 Identities=15% Similarity=0.200 Sum_probs=123.1
Q ss_pred EECCCCCEEEE-EECCCcE--EEEECCCceeEeecCCCCC-EEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec
Q 010759 220 DWNGEGTLLAT-GSYDGQA--RIWSTNGDLKCTLSKHKGP-IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 220 ~~s~~~~~l~s-g~~dg~i--~iw~~~~~~~~~~~~h~~~-V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
+|.++|+.|+- +..||.- .+-|+.......+..+.+. ..+..++|+++.++-....++|+--|+.+.+....+...
T Consensus 42 ~ft~dG~kllF~s~~dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e~~~vy~~p 121 (386)
T PF14583_consen 42 CFTDDGRKLLFASDFDGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLEERVVYEVP 121 (386)
T ss_dssp -B-TTS-EEEEEE-TTSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT--EEEEEE--
T ss_pred CcCCCCCEEEEEeccCCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCcEEEEEECC
Confidence 57888865555 4446654 4456666666666554322 335667788888765555678999999998866666554
Q ss_pred ccCeEEEecC--CCceEEEE----c-------------------CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC
Q 010759 296 SGPTLDVDWR--NNVSFATS----S-------------------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 350 (502)
Q Consensus 296 ~~~~~~~~~~--~~~~~~~~----~-------------------~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 350 (502)
..-+....|. .+...+.+ . ....|+..++.++..-..+. -...+.-+.|+|...
T Consensus 122 ~~~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~-~~~wlgH~~fsP~dp 200 (386)
T PF14583_consen 122 DDWKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFE-DTDWLGHVQFSPTDP 200 (386)
T ss_dssp TTEEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEE-ESS-EEEEEEETTEE
T ss_pred cccccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEe-cCccccCcccCCCCC
Confidence 4322222221 11111111 0 01234444555544332222 233456688888654
Q ss_pred E-EEEEeC---CC-cEEEEeCCCC-ceeeecccC--CCcEEEEEEccCCCCCCCCCCcEEEEE---EeCCCeEEEEeCCC
Q 010759 351 L-LASCSD---DV-TAKIWNMKQD-KYVHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILAS---ASFDSTVKLWDVEL 419 (502)
Q Consensus 351 ~-l~sgs~---dg-~i~iwd~~~~-~~~~~~~~~--~~~i~~~~~sp~g~~~~~~~~~~~l~s---gs~dg~i~iwd~~~ 419 (502)
. |+-|.+ +. .-|||-+++. .....+..+ ...+.-=-|.|+|.. ++..+ ++.+..|.-+|+.+
T Consensus 201 ~li~fCHEGpw~~Vd~RiW~i~~dg~~~~~v~~~~~~e~~gHEfw~~DG~~-------i~y~~~~~~~~~~~i~~~d~~t 273 (386)
T PF14583_consen 201 TLIMFCHEGPWDLVDQRIWTINTDGSNVKKVHRRMEGESVGHEFWVPDGST-------IWYDSYTPGGQDFWIAGYDPDT 273 (386)
T ss_dssp EEEEEEE-S-TTTSS-SEEEEETTS---EESS---TTEEEEEEEE-TTSS--------EEEEEEETTT--EEEEEE-TTT
T ss_pred CEEEEeccCCcceeceEEEEEEcCCCcceeeecCCCCcccccccccCCCCE-------EEEEeecCCCCceEEEeeCCCC
Confidence 4 444443 22 2477765432 222222222 223344468888863 11112 22344567778887
Q ss_pred CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC----------------cEEEEeCCCCeeEEEEecC---------C--
Q 010759 420 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK----------------SMHIWSLKEGKIVKTYTGN---------G-- 472 (502)
Q Consensus 420 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg----------------~i~iw~~~~~~~~~~~~~~---------~-- 472 (502)
++...... ..+...+--++||+++|-=|.|. .|+++++..+.......+. .
T Consensus 274 ~~~~~~~~--~p~~~H~~ss~Dg~L~vGDG~d~p~~v~~~~~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~ 351 (386)
T PF14583_consen 274 GERRRLME--MPWCSHFMSSPDGKLFVGDGGDAPVDVADAGGYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQV 351 (386)
T ss_dssp --EEEEEE--E-SEEEEEE-TTSSEEEEEE-------------------EEEEEETTTTEEEEEEE-------BTTBSST
T ss_pred CCceEEEe--CCceeeeEEcCCCCEEEecCCCCCccccccccceecCCcEEEEeccccCceeeeeeccCcceeecCCCcc
Confidence 75433221 12345566789999887544332 5677888877654322221 1
Q ss_pred CEEEEEECCCCCEEEEEE-CCCeEEEEEe
Q 010759 473 GIFEVCWNKEGDKIAACF-ANHTVCVLDF 500 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~-~~~~v~v~~~ 500 (502)
.=..+.|+|||+.++..+ ..|...||=+
T Consensus 352 ~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 352 THPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp T----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred CCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 125789999999877655 4677777643
No 335
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=98.00 E-value=0.0029 Score=62.87 Aligned_cols=214 Identities=15% Similarity=0.228 Sum_probs=115.6
Q ss_pred CCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 254 KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 254 ~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
......+.++|+|++++. +.||...|+........ . .+......|.....|++-.....|.++.--.+...+.+
T Consensus 32 ~~~p~~ls~npngr~v~V-~g~geY~iyt~~~~r~k--~---~G~g~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~k~i 105 (443)
T PF04053_consen 32 EIYPQSLSHNPNGRFVLV-CGDGEYEIYTALAWRNK--A---FGSGLSFVWSSRNRYAVLESSSTIKIYKNFKNEVVKSI 105 (443)
T ss_dssp SS--SEEEE-TTSSEEEE-EETTEEEEEETTTTEEE--E---EEE-SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT---
T ss_pred CcCCeeEEECCCCCEEEE-EcCCEEEEEEccCCccc--c---cCceeEEEEecCccEEEEECCCeEEEEEcCccccceEE
Confidence 344678999999998888 55788888874332211 1 23344566766777888777788888643222222222
Q ss_pred cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
... ..+..+- + |.+|+..+.+ .|.+||+.+++.+..+... .|..+.|++++. +++-.+ +.++.
T Consensus 106 ~~~-~~~~~If--~-G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~--~vk~V~Ws~~g~---------~val~t-~~~i~ 168 (443)
T PF04053_consen 106 KLP-FSVEKIF--G-GNLLGVKSSD-FICFYDWETGKLIRRIDVS--AVKYVIWSDDGE---------LVALVT-KDSIY 168 (443)
T ss_dssp --S-S-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS---E-EEEEE-TTSS---------EEEEE--S-SEE
T ss_pred cCC-cccceEE--c-CcEEEEECCC-CEEEEEhhHcceeeEEecC--CCcEEEEECCCC---------EEEEEe-CCeEE
Confidence 211 1233332 2 8888777655 8999999999999887643 489999999986 455554 44677
Q ss_pred EEeCCCC--------------eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEEecCCCEEEE
Q 010759 414 LWDVELG--------------KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTYTGNGGIFEV 477 (502)
Q Consensus 414 iwd~~~~--------------~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~~~~~i~~~ 477 (502)
|++.... ..+.++ ...|.+.+|..+ -++.|.. . .|+.+ -.|.. +.++ ...++=+
T Consensus 169 il~~~~~~~~~~~~~g~e~~f~~~~E~---~~~IkSg~W~~d-~fiYtT~-~-~lkYl--~~Ge~~~i~~l--d~~~yll 238 (443)
T PF04053_consen 169 ILKYNLEAVAAIPEEGVEDAFELIHEI---SERIKSGCWVED-CFIYTTS-N-HLKYL--VNGETGIIAHL--DKPLYLL 238 (443)
T ss_dssp EEEE-HHHHHHBTTTB-GGGEEEEEEE----S--SEEEEETT-EEEEE-T-T-EEEEE--ETTEEEEEEE---SS--EEE
T ss_pred EEEecchhcccccccCchhceEEEEEe---cceeEEEEEEcC-EEEEEcC-C-eEEEE--EcCCcceEEEc--CCceEEE
Confidence 7765432 233332 356888888766 3444433 2 67763 33433 3333 4456777
Q ss_pred EECCCCCEEEEEECCCeEEEEEe
Q 010759 478 CWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 478 ~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
...|..+++.....++.|..+.+
T Consensus 239 gy~~~~~~ly~~Dr~~~v~~~~l 261 (443)
T PF04053_consen 239 GYLPKENRLYLIDRDGNVISYEL 261 (443)
T ss_dssp EEETTTTEEEEE-TT--EEEEE-
T ss_pred EEEccCCEEEEEECCCCEEEEEE
Confidence 78888889999988888877754
No 336
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.97 E-value=0.022 Score=56.54 Aligned_cols=189 Identities=19% Similarity=0.272 Sum_probs=103.5
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec----ccCeEE-----EecCC
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH----SGPTLD-----VDWRN 306 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~----~~~~~~-----~~~~~ 306 (502)
.|+||+..|.+...+.--.+.+.++.|+.+ ..|+.-..||++++||+.... ++... ...+.. ..+..
T Consensus 62 ~I~iys~sG~ll~~i~w~~~~iv~~~wt~~-e~LvvV~~dG~v~vy~~~G~~---~fsl~~~i~~~~v~e~~i~~~~~~~ 137 (410)
T PF04841_consen 62 SIQIYSSSGKLLSSIPWDSGRIVGMGWTDD-EELVVVQSDGTVRVYDLFGEF---QFSLGEEIEEEKVLECRIFAIWFYK 137 (410)
T ss_pred EEEEECCCCCEeEEEEECCCCEEEEEECCC-CeEEEEEcCCEEEEEeCCCce---eechhhhccccCcccccccccccCC
Confidence 499999998887766544489999999885 456677799999999986332 22111 111111 12222
Q ss_pred CceEEEEcCCCeEEEEE-cCCCcceeee---cC-----CCc-cee-EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 307 NVSFATSSTDNMIYVCK-IGENRPIKTF---AG-----HQG-EVN-CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~-~~~~~~~~~~---~~-----h~~-~v~-~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
+..++.. .++.+++.. .......+.+ .+ |.- ... ...++.+....+....++.+.+-+...... +
T Consensus 138 ~GivvLt-~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~~~i~~~~g~~i~~i~~~~~~~---i 213 (410)
T PF04841_consen 138 NGIVVLT-GNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRVVEILLANGETIYIIDENSFKQ---I 213 (410)
T ss_pred CCEEEEC-CCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcceEEEEecCCEEEEEEcccccc---c
Confidence 3333332 334444432 2221111111 11 100 000 123444455555555555555333221111 1
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCEEEEEECCCC
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPTG 442 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg 442 (502)
...+++..++.||++. ++|.-..+|.+.+....-.+.+..+... ......+.|.-+.
T Consensus 214 -~~~~~i~~iavSpng~---------~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~d 271 (410)
T PF04841_consen 214 -DSDGPIIKIAVSPNGK---------FIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGND 271 (410)
T ss_pred -cCCCCeEEEEECCCCC---------EEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECCC
Confidence 1246899999999987 6777778899999887666666665533 3345667775443
No 337
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.95 E-value=0.0079 Score=53.33 Aligned_cols=207 Identities=16% Similarity=0.147 Sum_probs=118.6
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEE--ee--ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCccee
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQ--FE--FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVN 341 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~ 341 (502)
..+++.||..+.++.-|.+++...-. +. ....++. -+..++.+...+.+++.+..++..+..|..-...-.
T Consensus 23 kT~v~igSHs~~~~avd~~sG~~~We~ilg~RiE~sa~v-----vgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~~vk~ 97 (354)
T KOG4649|consen 23 KTLVVIGSHSGIVIAVDPQSGNLIWEAILGVRIECSAIV-----VGDFVVLGCYSGGLYFLCVKTGSQIWNFVILETVKV 97 (354)
T ss_pred ceEEEEecCCceEEEecCCCCcEEeehhhCceeeeeeEE-----ECCEEEEEEccCcEEEEEecchhheeeeeehhhhcc
Confidence 35678888888888888888764432 11 1111221 122367788888999999988877666543332223
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC
Q 010759 342 CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELG 420 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~ 420 (502)
.....+++.++..|+.|++....|.++..++...+-..+...+-+..| +++ +++ +...|.+.--.....
T Consensus 98 ~a~~d~~~glIycgshd~~~yalD~~~~~cVykskcgG~~f~sP~i~~g~~s--------ly~--a~t~G~vlavt~~~~ 167 (354)
T KOG4649|consen 98 RAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKSKCGGGTFVSPVIAPGDGS--------LYA--AITAGAVLAVTKNPY 167 (354)
T ss_pred ceEEcCCCceEEEecCCCcEEEecccccceEEecccCCceeccceecCCCce--------EEE--EeccceEEEEccCCC
Confidence 455678999999999999999999999988877654333322333333 221 222 233343332222222
Q ss_pred --eEEEEeeCCCCCEEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEE-EEEEC-CCCCEEEEEECC
Q 010759 421 --KLLYSLNGHREPVYSLAFSP--TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIF-EVCWN-KEGDKIAACFAN 492 (502)
Q Consensus 421 --~~~~~~~~h~~~v~~l~~sp--dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~-~~~ws-~~g~~la~~~~~ 492 (502)
..++... ..+||.+ +| -++++..+.-||.+.-++ ..|+.+..+...++|+ +.+-+ |.-+.|..+..|
T Consensus 168 ~~~~~w~~~-~~~PiF~---splcv~~sv~i~~VdG~l~~f~-~sG~qvwr~~t~GpIf~~Pc~s~Ps~q~i~~~~~~ 240 (354)
T KOG4649|consen 168 SSTEFWAAT-RFGPIFA---SPLCVGSSVIITTVDGVLTSFD-ESGRQVWRPATKGPIFMEPCESRPSCQQISLENEN 240 (354)
T ss_pred Ccceehhhh-cCCcccc---CceeccceEEEEEeccEEEEEc-CCCcEEEeecCCCceecccccCCCcceEEEEecCC
Confidence 1111111 1123321 11 145666677788888888 6677777776666654 34444 444555554443
No 338
>PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment. This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B.
Probab=97.93 E-value=0.00028 Score=70.01 Aligned_cols=142 Identities=17% Similarity=0.275 Sum_probs=82.1
Q ss_pred CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 336 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
..-....+.++|+|++++.+ .||...|+.....+... .+....+.|.+.+. +|.-...++|.|+
T Consensus 31 ~~~~p~~ls~npngr~v~V~-g~geY~iyt~~~~r~k~-----~G~g~~~vw~~~n~----------yAv~~~~~~I~I~ 94 (443)
T PF04053_consen 31 CEIYPQSLSHNPNGRFVLVC-GDGEYEIYTALAWRNKA-----FGSGLSFVWSSRNR----------YAVLESSSTIKIY 94 (443)
T ss_dssp -SS--SEEEE-TTSSEEEEE-ETTEEEEEETTTTEEEE-----EEE-SEEEE-TSSE----------EEEE-TTS-EEEE
T ss_pred CCcCCeeEEECCCCCEEEEE-cCCEEEEEEccCCcccc-----cCceeEEEEecCcc----------EEEEECCCeEEEE
Confidence 34456789999999999885 56777777643332211 23445678888553 5666668889996
Q ss_pred eCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010759 416 DVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 416 d~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
.--.......+.. ...+..|-. |.+|...+.+ .|.+||+.+++++..+.... |..+-||++|+++|..+.+ ++
T Consensus 95 kn~~~~~~k~i~~-~~~~~~If~---G~LL~~~~~~-~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~-~i 167 (443)
T PF04053_consen 95 KNFKNEVVKSIKL-PFSVEKIFG---GNLLGVKSSD-FICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKD-SI 167 (443)
T ss_dssp ETTEE-TT------SS-EEEEE----SSSEEEEETT-EEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S--SE
T ss_pred EcCccccceEEcC-CcccceEEc---CcEEEEECCC-CEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCC-eE
Confidence 3221221112221 123455543 8888877755 89999999999999987543 8899999999999999866 67
Q ss_pred EEEEe
Q 010759 496 CVLDF 500 (502)
Q Consensus 496 ~v~~~ 500 (502)
.|++.
T Consensus 168 ~il~~ 172 (443)
T PF04053_consen 168 YILKY 172 (443)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 77764
No 339
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=97.92 E-value=0.018 Score=56.34 Aligned_cols=90 Identities=13% Similarity=0.158 Sum_probs=58.4
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc-EEEEEEccCCC--------CCC-CCCCcEEEEEEe
Q 010759 338 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE-IYTIRWSPTGS--------GTN-NPNQQLILASAS 407 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~-i~~~~~sp~g~--------~~~-~~~~~~~l~sgs 407 (502)
..+.+++.+|++++.|+...=|.|.++|+.++..++-+++.... +.=+.....+. ... .....++++-+-
T Consensus 308 R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIyap 387 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIYAP 387 (415)
T ss_pred ceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEEec
Confidence 45778999999999988878899999999988877766654322 11111101100 000 011123455577
Q ss_pred CCCeEEEEeCCCCeEEEEee
Q 010759 408 FDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 408 ~dg~i~iwd~~~~~~~~~~~ 427 (502)
.-|.|.||.++.|..+..+.
T Consensus 388 rRg~lEvW~~~~g~Rv~a~~ 407 (415)
T PF14655_consen 388 RRGILEVWSMRQGPRVAAFN 407 (415)
T ss_pred cCCeEEEEecCCCCEEEEEE
Confidence 88999999999888876664
No 340
>KOG3621 consensus WD40 repeat-containing protein [General function prediction only]
Probab=97.84 E-value=0.00048 Score=68.96 Aligned_cols=120 Identities=16% Similarity=0.212 Sum_probs=87.6
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeec--CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS--KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~--~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
..|.--++...+++++.|+.-|.+++|+..+.....+. +-.+.+..+..++...+++.|+..|.|.++-++......
T Consensus 34 ~~v~lTc~dst~~~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~- 112 (726)
T KOG3621|consen 34 ARVKLTCVDATEEYLAMGSSAGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRD- 112 (726)
T ss_pred ceEEEEEeecCCceEEEecccceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhccCCCc-
Confidence 34555677788999999999999999998765444333 345666777888888888899999999998776532110
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
..+++ ..| ..|...|+|++|++++..|++|..-|+|.+-.+..
T Consensus 113 ----------------~~~~t-~~d-----------------~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s 155 (726)
T KOG3621|consen 113 ----------------LDYVT-PCD-----------------KSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDS 155 (726)
T ss_pred ----------------ceeec-ccc-----------------ccCCceEEEEEecccccEEeecCCCceEEEEEech
Confidence 00000 000 12778899999999999999999999998877765
No 341
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=97.83 E-value=0.028 Score=52.68 Aligned_cols=226 Identities=16% Similarity=0.136 Sum_probs=122.8
Q ss_pred CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe-----------
Q 010759 224 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF----------- 292 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~----------- 292 (502)
.++.|+.|..+| +.+++...........+..+|..+...|.-+.|++-+ |+.+.++++.........
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~~~~i~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~l~~~~~~~~~~~~~~~~~ 83 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSKPTRILKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDSLEPVSTSAPLAFPKSRSL 83 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCccceeEeecceEEEEEEecccCEEEEEc-CCccEEEEchhhccccccccccccccccc
Confidence 467899998888 8888873222222222344599999998877766654 599999998754433211
Q ss_pred --e-ecccCeEEEe---cCCCceEEEEcCCCeEEEEEcCCC-----cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 293 --E-FHSGPTLDVD---WRNNVSFATSSTDNMIYVCKIGEN-----RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 293 --~-~~~~~~~~~~---~~~~~~~~~~~~d~~i~~~~~~~~-----~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
. .....+..+. .......+.....+.|.++..... +..+.+.- ...+.+++|. ++.++.|..+ ..
T Consensus 84 ~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~l-p~~~~~i~~~--~~~i~v~~~~-~f 159 (275)
T PF00780_consen 84 PTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISL-PDPPSSIAFL--GNKICVGTSK-GF 159 (275)
T ss_pred cccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEc-CCCcEEEEEe--CCEEEEEeCC-ce
Confidence 0 0111122222 122333444444557777766542 23344332 3567888888 5566666654 47
Q ss_pred EEEeCCCCceeeecccCC------------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE--Eee
Q 010759 362 KIWNMKQDKYVHDLREHS------------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY--SLN 427 (502)
Q Consensus 362 ~iwd~~~~~~~~~~~~~~------------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~ 427 (502)
.+.|+.++....-+.... .++..+.... + .+|++ .|..-.+.|. .|+... .+.
T Consensus 160 ~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~-e~Ll~--~~~~g~fv~~-~G~~~r~~~i~ 226 (275)
T PF00780_consen 160 YLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLSD---------N-EFLLC--YDNIGVFVNK-NGEPSRKSTIQ 226 (275)
T ss_pred EEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeCC---------c-eEEEE--ecceEEEEcC-CCCcCcccEEE
Confidence 778888665432221111 1122222211 1 13332 2333333343 233222 111
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG 472 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~ 472 (502)
-.....++++. ..||+..+.+ .|.||++.++++++++....
T Consensus 227 -W~~~p~~~~~~--~pyli~~~~~-~iEV~~~~~~~lvQ~i~~~~ 267 (275)
T PF00780_consen 227 -WSSAPQSVAYS--SPYLIAFSSN-SIEVRSLETGELVQTIPLPN 267 (275)
T ss_pred -cCCchhEEEEE--CCEEEEECCC-EEEEEECcCCcEEEEEECCC
Confidence 12234556663 4588877765 59999999999999987643
No 342
>KOG3617 consensus WD40 and TPR repeat-containing protein [General function prediction only]
Probab=97.82 E-value=0.00071 Score=68.98 Aligned_cols=259 Identities=20% Similarity=0.238 Sum_probs=147.4
Q ss_pred EEEECCCCCEEEEEEC----CCcEEEEECCCceeE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 218 TLDWNGEGTLLATGSY----DGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~----dg~i~iw~~~~~~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
-..|+|...+|+.++. .|.|.||--.|+... +..-| +++++|||..-.|+.|=.-|.+-+|...+.+....
T Consensus 20 i~SWHPsePlfAVA~fS~er~GSVtIfadtGEPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv 96 (1416)
T KOG3617|consen 20 ISSWHPSEPLFAVASFSPERGGSVTIFADTGEPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTV 96 (1416)
T ss_pred ccccCCCCceeEEEEecCCCCceEEEEecCCCCCccccccee---hhhhccChHHHHHhhccccceeEEEecCCceeeee
Confidence 3479999999888865 478888865554221 22222 46799999987788888889999999988888877
Q ss_pred eeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceee--ecCCC----cceeEEEEcCCCC------EEEEEeCC
Q 010759 292 FEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKT--FAGHQ----GEVNCVKWDPTGS------LLASCSDD 358 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~--~~~h~----~~v~~v~~~p~~~------~l~sgs~d 358 (502)
...|..++..++|.. ...++++..-|.+..|.......++. +..|. -...|...++++. ..+..+++
T Consensus 97 ~~th~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d~~g~~q~~~~~~hel~~~ltl~cfRL~~~~Ee~~~laKaaVtgDe 176 (1416)
T KOG3617|consen 97 VETHPAPIQGLDWSHDGTVLMTLDNPGSVHLWRYDVIGEIQTSNIMQHELNDQLTLWCFRLSYDREEKFKLAKAAVTGDE 176 (1416)
T ss_pred ccCCCCCceeEEecCCCCeEEEcCCCceeEEEEeeeccccccchhhhhHhhceeeEEEEecCCChHHhhhhhhhhccCch
Confidence 888999999999965 45677888888999998763322221 12232 1234556666642 13333344
Q ss_pred CcEE-EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--------
Q 010759 359 VTAK-IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-------- 429 (502)
Q Consensus 359 g~i~-iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-------- 429 (502)
..+- .++++....-..+. +.+ .|.|. .+..++.+|+|+..|-. |++....+..
T Consensus 177 ~alD~~fnwk~~~a~rs~~-ksg-------v~~g~---------~F~~~~~~GtVyyvdq~-g~~~~V~k~dS~vQmLf~ 238 (1416)
T KOG3617|consen 177 SALDEPFNWKESLAERSDE-KSG-------VPKGT---------EFLFAGKSGTVYYVDQN-GRQRTVHKLDSEVQMLFM 238 (1416)
T ss_pred hhhcccccCccchhhcccc-ccC-------CCCCc---------EEEEEcCCceEEEEcCC-CcEEEEEEccchHHHHHh
Confidence 3332 44433211111100 000 13332 34556788999887733 4443333211
Q ss_pred --CCCEEE--------EEECC-CCCE------EE---EEeCCCcEEEEeCCCCeeEEE----EecCCCEEEEEECCCCCE
Q 010759 430 --REPVYS--------LAFSP-TGEY------LA---SGSLDKSMHIWSLKEGKIVKT----YTGNGGIFEVCWNKEGDK 485 (502)
Q Consensus 430 --~~~v~~--------l~~sp-dg~~------la---sgs~Dg~i~iw~~~~~~~~~~----~~~~~~i~~~~ws~~g~~ 485 (502)
...|.. +-|.| .|.. =+ .|+..|.|-+=... |-+.++ +.....+.++|+...+..
T Consensus 239 ~~~eai~~i~e~lr~~l~~v~~~G~~ee~~~vk~sgk~GgrqGgiA~sEss-GvLr~~eKyg~e~ge~~~c~cY~~~~~~ 317 (1416)
T KOG3617|consen 239 GYCEAISIIIEFLRDCLIFVLAKGTSEERCAVKVSGKLGGRQGGIACSESS-GVLRKSEKYGLELGEGILCMCYGEKEIR 317 (1416)
T ss_pred cccceEEEEeeeceeeEEEecCCCchHHhhhhhhccccCCccCcccccccc-ccccCCcchhhhcCCceEEEEEeccceE
Confidence 112222 11211 1110 00 12222222221111 111111 112346899999999999
Q ss_pred EEEEECCCeEEEE
Q 010759 486 IAACFANHTVCVL 498 (502)
Q Consensus 486 la~~~~~~~v~v~ 498 (502)
|++|...|.|.+|
T Consensus 318 l~agt~~gnv~~w 330 (1416)
T KOG3617|consen 318 LWAGTKEGNVTIW 330 (1416)
T ss_pred EEecccCCcEEEe
Confidence 9999999999998
No 343
>PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats.
Probab=97.79 E-value=0.00015 Score=71.35 Aligned_cols=76 Identities=17% Similarity=0.224 Sum_probs=63.6
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
+....|.|++++|+...|+.|..||.|.+||....... +....-..+.++|||+|..|++|+..|.+.+||+.-..
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~DgSiiLyD~~~~~t~-~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALsp 332 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCEDGSIILYDTTRGVTL-LAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALSP 332 (545)
T ss_pred ecCCcceEEecCcccceEEEEecCCeEEEEEcCCCeee-eeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecCc
Confidence 34567999999999999999999999999998765433 33444566899999999999999999999999986543
No 344
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.79 E-value=0.018 Score=54.04 Aligned_cols=253 Identities=13% Similarity=0.159 Sum_probs=135.9
Q ss_pred EEEEECCCCCEEEEEEC----------CCcEEEEECCCcee-E--eecC-CCC----CEEEEEecCCCCEEEEe--cCCC
Q 010759 217 TTLDWNGEGTLLATGSY----------DGQARIWSTNGDLK-C--TLSK-HKG----PIFSLKWNKKGDYLLTG--SCDK 276 (502)
Q Consensus 217 ~~l~~s~~~~~l~sg~~----------dg~i~iw~~~~~~~-~--~~~~-h~~----~V~~l~~~~~~~~l~sg--s~D~ 276 (502)
-.+..+|+++.+++++. .-.|.+||...-.. . .+.. |.. ....+.++.++++++.. +--.
T Consensus 39 ~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~~~~~~~~ls~dgk~~~V~N~TPa~ 118 (342)
T PF06433_consen 39 GNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVVPYKNMFALSADGKFLYVQNFTPAT 118 (342)
T ss_dssp EEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS--GGGEEE-TTSSEEEEEEESSSE
T ss_pred CceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheecccccceEEccCCcEEEEEccCCCC
Confidence 34667899998886532 34788999765321 1 2222 111 12345678888876654 4456
Q ss_pred eEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC-Ccceee----ecCCCc-ceeEEEEcCCCC
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKT----FAGHQG-EVNCVKWDPTGS 350 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~----~~~h~~-~v~~v~~~p~~~ 350 (502)
+|.|-|+..++.+..+.... +. .+-...+..|.+-+.||.+....++. ++..+. |..-.. .+..-++...+.
T Consensus 119 SVtVVDl~~~kvv~ei~~PG-C~-~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~~t~~F~~~~dp~f~~~~~~~~~~ 196 (342)
T PF06433_consen 119 SVTVVDLAAKKVVGEIDTPG-CW-LIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQKSTKVFDPDDDPLFEHPAYSRDGG 196 (342)
T ss_dssp EEEEEETTTTEEEEEEEGTS-EE-EEEEEETTEEEEEETTSCEEEEEETSTSSEEEEEEEESSTTTS-B-S--EEETTTT
T ss_pred eEEEEECCCCceeeeecCCC-EE-EEEecCCCceEEEecCCceEEEEECCCCCEeEeeccccCCCCcccccccceECCCC
Confidence 78888998888877664322 11 12223455788888899988888873 333221 111111 222334444444
Q ss_pred EEEEEeCCCcEEEEeCCCCcee--eecccCCCcEEEEEEccCCCCC---CCCCCcEEEE-EEeCCC-------eEEEEeC
Q 010759 351 LLASCSDDVTAKIWNMKQDKYV--HDLREHSKEIYTIRWSPTGSGT---NNPNQQLILA-SASFDS-------TVKLWDV 417 (502)
Q Consensus 351 ~l~sgs~dg~i~iwd~~~~~~~--~~~~~~~~~i~~~~~sp~g~~~---~~~~~~~~l~-sgs~dg-------~i~iwd~ 417 (502)
.++--+..|.|+--|+...... ..+......-..-.|.|.|-.. ..+.+.+|++ --+.+| .|-++|+
T Consensus 197 ~~~F~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~ 276 (342)
T PF06433_consen 197 RLYFVSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLIAYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDL 276 (342)
T ss_dssp EEEEEBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-EEEETTTTEEEEEEEE--TT-TTS-EEEEEEEET
T ss_pred eEEEEecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeeeeeccccCeEEEEecCCCCCCccCCceEEEEEEC
Confidence 4444677888877776544321 1110000000001233433211 0112223322 222222 3777899
Q ss_pred CCCeEEEEeeCCCCCEEEEEECCCCC-EEEEE-eCCCcEEEEeCCCCeeEEEEecCC
Q 010759 418 ELGKLLYSLNGHREPVYSLAFSPTGE-YLASG-SLDKSMHIWSLKEGKIVKTYTGNG 472 (502)
Q Consensus 418 ~~~~~~~~~~~h~~~v~~l~~spdg~-~lasg-s~Dg~i~iw~~~~~~~~~~~~~~~ 472 (502)
.+++.+.++.- ..++.+|+.+.+.+ +|.+. ..++.|.+||..+|+++++...-+
T Consensus 277 ~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~~~~~lG 332 (342)
T PF06433_consen 277 KTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVRSIEQLG 332 (342)
T ss_dssp TTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEEEE---S
T ss_pred CCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEeehhccC
Confidence 99999988863 34688999998864 66554 458999999999999999887544
No 345
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=97.78 E-value=0.026 Score=56.02 Aligned_cols=198 Identities=12% Similarity=0.183 Sum_probs=93.1
Q ss_pred eEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCc------ceeeecCCCcceeEEEEcCCCC
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENR------PIKTFAGHQGEVNCVKWDPTGS 350 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~------~~~~~~~h~~~v~~v~~~p~~~ 350 (502)
.|.+|+. .|..+..+....+.+..+.|..+..++.-..||.++++++.... .+....-....+....+..+|-
T Consensus 62 ~I~iys~-sG~ll~~i~w~~~~iv~~~wt~~e~LvvV~~dG~v~vy~~~G~~~fsl~~~i~~~~v~e~~i~~~~~~~~Gi 140 (410)
T PF04841_consen 62 SIQIYSS-SGKLLSSIPWDSGRIVGMGWTDDEELVVVQSDGTVRVYDLFGEFQFSLGEEIEEEKVLECRIFAIWFYKNGI 140 (410)
T ss_pred EEEEECC-CCCEeEEEEECCCCEEEEEECCCCeEEEEEcCCEEEEEeCCCceeechhhhccccCcccccccccccCCCCE
Confidence 3566654 33344444444477889999888888888999999999986443 0100011111222223333553
Q ss_pred EEEEEeCCCcEEEEeCCCCc-eeeecccCCCcEEEEEEccCCCCC--CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee
Q 010759 351 LLASCSDDVTAKIWNMKQDK-YVHDLREHSKEIYTIRWSPTGSGT--NNPNQQLILASASFDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 351 ~l~sgs~dg~i~iwd~~~~~-~~~~~~~~~~~i~~~~~sp~g~~~--~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 427 (502)
.+. ..++.+.+-.-.... ....+...........+.+..... ...... +.+....++.+.+.+-...+. +.
T Consensus 141 vvL--t~~~~~~~v~n~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~~l~~~~~-~~i~~~~g~~i~~i~~~~~~~---i~ 214 (410)
T PF04841_consen 141 VVL--TGNNRFYVVNNIDEPVKLRRLPEIPGLWTKFHWWPSWTVIPLLSSDRV-VEILLANGETIYIIDENSFKQ---ID 214 (410)
T ss_pred EEE--CCCCeEEEEeCccccchhhccccCCCcccccccccccccceEeecCcc-eEEEEecCCEEEEEEcccccc---cc
Confidence 333 334444443222111 111111000000001111110000 000000 112222333344222211111 11
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC--CCEEEEEECCC
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKE 482 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~ 482 (502)
..+++..++.||+|++||.-..+|.+.|....-.+.+..+... .....++|=-+
T Consensus 215 -~~~~i~~iavSpng~~iAl~t~~g~l~v~ssDf~~~~~e~~~~~~~~p~~~~WCG~ 270 (410)
T PF04841_consen 215 -SDGPIIKIAVSPNGKFIALFTDSGNLWVVSSDFSEKLCEFDTDSKSPPKQMAWCGN 270 (410)
T ss_pred -CCCCeEEEEECCCCCEEEEEECCCCEEEEECcccceeEEeecCcCCCCcEEEEECC
Confidence 2368999999999999999999999999886544444444332 33344445443
No 346
>PF00930 DPPIV_N: Dipeptidyl peptidase IV (DPP IV) N-terminal region; InterPro: IPR002469 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain defines serine peptidases belonging to MEROPS peptidase family S9 (clan SC), subfamily S9B (dipeptidyl-peptidase IV). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. This domain is an alignment of the region to the N-terminal side of the active site, which is found in IPR001375 from INTERPRO. CD26 (3.4.14.5 from EC) is also called adenosine deaminase-binding protein (ADA-binding protein) or dipeptidylpeptidase IV (DPP IV ectoenzyme). The exopeptidase cleaves off N-terminal X-Pro or X-Ala dipeptides from polypeptides (dipeptidyl peptidase IV activity). CD26 serves as the costimulatory molecule in T cell activation and is an associated marker of autoimmune diseases, adenosine deaminase-deficiency and HIV pathogenesis. Dipeptidyl peptidase IV (DPP IV) is responsible for the removal of N-terminal dipeptides sequentially from polypeptides having unsubstituted N termini, provided that the penultimate residue is proline. The enzyme catalyses the reaction: Dipeptidyl-Polypeptide + H(2)O = Dipeptide + Polypeptide It is a type II membrane protein that forms a homodimer. CD molecules are leucocyte antigens on cell surfaces. CD antigens nomenclature is updated at Protein Reviews On The Web (http://prow.nci.nih.gov/). ; GO: 0006508 proteolysis, 0016020 membrane; PDB: 2RIP_A 3Q8W_B 2AJL_I 1TKR_B 1TK3_B 3C45_A 2G5P_A 3G0C_D 1R9M_C 1RWQ_A ....
Probab=97.78 E-value=0.024 Score=55.38 Aligned_cols=285 Identities=18% Similarity=0.245 Sum_probs=133.8
Q ss_pred cCCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeec-ccc-cCCCCeEEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTN-EKSKDVTTL 219 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~V~~l 219 (502)
+....+..+......+....|||+|++||-.. ++-|.++++.++....-...+.-.+. ..... .+. +.-+.-..+
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~sP~g~~~~~v~-~~nly~~~~~~~~~~~lT~dg~~~i~--nG~~dwvyeEEv~~~~~~~ 106 (353)
T PF00930_consen 30 IETGEITPLTPPPPKLQDAKWSPDGKYIAFVR-DNNLYLRDLATGQETQLTTDGEPGIY--NGVPDWVYEEEVFDRRSAV 106 (353)
T ss_dssp TTTTEEEESS-EETTBSEEEE-SSSTEEEEEE-TTEEEEESSTTSEEEESES--TTTEE--ESB--HHHHHHTSSSSBSE
T ss_pred cCCCceEECcCCccccccceeecCCCeeEEEe-cCceEEEECCCCCeEEeccccceeEE--cCccceeccccccccccce
Confidence 33333444443366788999999999988875 57899998765532111111100000 00000 000 001223568
Q ss_pred EECCCCCEEEEEECC-CcEEEEECCCceeEeecCCC---CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe-e-
Q 010759 220 DWNGEGTLLATGSYD-GQARIWSTNGDLKCTLSKHK---GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-E- 293 (502)
Q Consensus 220 ~~s~~~~~l~sg~~d-g~i~iw~~~~~~~~~~~~h~---~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-~- 293 (502)
.|||||++|+....| ..|+.+.+. ...... -.+..+.+-.-|.-... -.+.++|+.+++....- .
T Consensus 107 ~WSpd~~~la~~~~d~~~v~~~~~~-----~~~~~~~~yp~~~~~~YPk~G~~np~----v~l~v~~~~~~~~~~~~~~~ 177 (353)
T PF00930_consen 107 WWSPDSKYLAFLRFDEREVPEYPLP-----DYSPPDSQYPEVESIRYPKAGDPNPR----VSLFVVDLASGKTTELDPPN 177 (353)
T ss_dssp EE-TTSSEEEEEEEE-TTS-EEEEE-----EESSSTESS-EEEEEE--BTTS---E----EEEEEEESSSTCCCEE---H
T ss_pred EECCCCCEEEEEEECCcCCceEEee-----ccCCccccCCcccccccCCCCCcCCc----eEEEEEECCCCcEEEeeecc
Confidence 999999999876554 334333210 111111 12444444322222111 13556787777643211 1
Q ss_pred ---ecccCeEEEecCCCce-EEEE--cCC---CeEEEEEcCCCcceeeecC-CCcc---eeEEEEc-CCCC-EEEEEeCC
Q 010759 294 ---FHSGPTLDVDWRNNVS-FATS--STD---NMIYVCKIGENRPIKTFAG-HQGE---VNCVKWD-PTGS-LLASCSDD 358 (502)
Q Consensus 294 ---~~~~~~~~~~~~~~~~-~~~~--~~d---~~i~~~~~~~~~~~~~~~~-h~~~---v~~v~~~-p~~~-~l~sgs~d 358 (502)
....-+..+.|.++.. ++.. ..+ ..+.+++..++.....+.. ..+. .....|. +++. +|.....|
T Consensus 178 ~~~~~~~yl~~v~W~~d~~~l~~~~~nR~q~~~~l~~~d~~tg~~~~~~~e~~~~Wv~~~~~~~~~~~~~~~~l~~s~~~ 257 (353)
T PF00930_consen 178 SLNPQDYYLTRVGWSPDGKRLWVQWLNRDQNRLDLVLCDASTGETRVVLEETSDGWVDVYDPPHFLGPDGNEFLWISERD 257 (353)
T ss_dssp HHHTSSEEEEEEEEEETTEEEEEEEEETTSTEEEEEEEEECTTTCEEEEEEESSSSSSSSSEEEE-TTTSSEEEEEEETT
T ss_pred ccCCCccCcccceecCCCcEEEEEEcccCCCEEEEEEEECCCCceeEEEEecCCcceeeecccccccCCCCEEEEEEEcC
Confidence 1112245566754433 3332 221 2455666655443222221 1222 2355554 5554 45555577
Q ss_pred CcEEEE--eCCCCceeeecccCCCcEEE-EEEccCCCCCCCCCCcEEEEEEeCCC----eEEEEeCCCCeEEEEeeCCCC
Q 010759 359 VTAKIW--NMKQDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILASASFDS----TVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 359 g~i~iw--d~~~~~~~~~~~~~~~~i~~-~~~sp~g~~~~~~~~~~~l~sgs~dg----~i~iwd~~~~~~~~~~~~h~~ 431 (502)
|.-+|| +...+. ...+....-.|.. +.|++.+. .+..++..++ .|..-++..+..+..++....
T Consensus 258 G~~hly~~~~~~~~-~~~lT~G~~~V~~i~~~d~~~~--------~iyf~a~~~~p~~r~lY~v~~~~~~~~~~LT~~~~ 328 (353)
T PF00930_consen 258 GYRHLYLYDLDGGK-PRQLTSGDWEVTSILGWDEDNN--------RIYFTANGDNPGERHLYRVSLDSGGEPKCLTCEDG 328 (353)
T ss_dssp SSEEEEEEETTSSE-EEESS-SSS-EEEEEEEECTSS--------EEEEEESSGGTTSBEEEEEETTETTEEEESSTTSS
T ss_pred CCcEEEEEcccccc-eeccccCceeecccceEcCCCC--------EEEEEecCCCCCceEEEEEEeCCCCCeEeccCCCC
Confidence 765554 555444 3344444455644 56776653 3455555432 455555663345566665444
Q ss_pred CEEEEEECCCCCEEEE
Q 010759 432 PVYSLAFSPTGEYLAS 447 (502)
Q Consensus 432 ~v~~l~~spdg~~las 447 (502)
.-..++|||+|++++-
T Consensus 329 ~~~~~~~Spdg~y~v~ 344 (353)
T PF00930_consen 329 DHYSASFSPDGKYYVD 344 (353)
T ss_dssp TTEEEEE-TTSSEEEE
T ss_pred CceEEEECCCCCEEEE
Confidence 4479999999998874
No 347
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.77 E-value=0.049 Score=53.65 Aligned_cols=233 Identities=16% Similarity=0.149 Sum_probs=144.3
Q ss_pred EEEEEecCCCCEEEEe-cCCCeEEEEeccCcceeEEeeec-ccC-eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 257 IFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFH-SGP-TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 257 V~~l~~~~~~~~l~sg-s~D~~v~iwd~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
...+...+++..++.. .....+...+............. ..+ -..+.......++....++.|.+.+......+...
T Consensus 33 ~~~v~~~~~g~~~~v~~~~~~~~~~~~~~~n~~~~~~~~g~~~p~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~ 112 (381)
T COG3391 33 PGGVAVNPDGTQVYVANSGSNDVSVIDATSNTVTQSLSVGGVYPAGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSI 112 (381)
T ss_pred CceeEEcCccCEEEEEeecCceeeecccccceeeeeccCCCccccceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEe
Confidence 3566777777544332 22225555554422111111111 111 12233344556777777888888886665544333
Q ss_pred cCCCcceeEEEEcCCCCEEEEEeC---CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCSD---DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS 410 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs~---dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg 410 (502)
.-- .....++++|+++.+..+.. ++++.+.|..+.+.......-..+ ..++++|+|. .+.++-..++
T Consensus 113 ~vG-~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~~vG~~P-~~~a~~p~g~--------~vyv~~~~~~ 182 (381)
T COG3391 113 PVG-LGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATIPVGNTP-TGVAVDPDGN--------KVYVTNSDDN 182 (381)
T ss_pred eec-cCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEEecCCCc-ceEEECCCCC--------eEEEEecCCC
Confidence 211 14567999999977665554 688999998888887774433334 7888999886 2444556789
Q ss_pred eEEEEeCCCCeEEE-E----eeCCCCCEEEEEECCCCCEEEEEeC---CCcEEEEeCCCCeeEEE-EecCC-CEEEEEEC
Q 010759 411 TVKLWDVELGKLLY-S----LNGHREPVYSLAFSPTGEYLASGSL---DKSMHIWSLKEGKIVKT-YTGNG-GIFEVCWN 480 (502)
Q Consensus 411 ~i~iwd~~~~~~~~-~----~~~h~~~v~~l~~spdg~~lasgs~---Dg~i~iw~~~~~~~~~~-~~~~~-~i~~~~ws 480 (502)
.|.+.|........ . +.-+ ..-..+.++|+|.++...-. ++.+...|..++.+... +.... ....+..+
T Consensus 183 ~v~vi~~~~~~v~~~~~~~~~~~~-~~P~~i~v~~~g~~~yV~~~~~~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~ 261 (381)
T COG3391 183 TVSVIDTSGNSVVRGSVGSLVGVG-TGPAGIAVDPDGNRVYVANDGSGSNNVLKIDTATGNVTATDLPVGSGAPRGVAVD 261 (381)
T ss_pred eEEEEeCCCcceeccccccccccC-CCCceEEECCCCCEEEEEeccCCCceEEEEeCCCceEEEeccccccCCCCceeEC
Confidence 99999977655542 1 1112 22366899999986654433 36999999998887765 33323 46788999
Q ss_pred CCCCEEEEEEC-CCeEEEEEe
Q 010759 481 KEGDKIAACFA-NHTVCVLDF 500 (502)
Q Consensus 481 ~~g~~la~~~~-~~~v~v~~~ 500 (502)
|+|+.+-.... .+.|.+.|.
T Consensus 262 p~g~~~yv~~~~~~~V~vid~ 282 (381)
T COG3391 262 PAGKAAYVANSQGGTVSVIDG 282 (381)
T ss_pred CCCCEEEEEecCCCeEEEEeC
Confidence 99998877744 477877764
No 348
>KOG4649 consensus PQQ (pyrrolo-quinoline quinone) repeat protein [Secondary metabolites biosynthesis, transport and catabolism]
Probab=97.77 E-value=0.025 Score=50.27 Aligned_cols=67 Identities=16% Similarity=0.187 Sum_probs=47.1
Q ss_pred CCEEEEEECCCcEEEEECCCc-eeEeecCCCCCE-EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 225 GTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V-~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
|.+++.|.+.|.+++-+.... +...+..- +.| ......+++..+..|+.|++....|.++..++-..
T Consensus 63 gdfVV~GCy~g~lYfl~~~tGs~~w~f~~~-~~vk~~a~~d~~~glIycgshd~~~yalD~~~~~cVyks 131 (354)
T KOG4649|consen 63 GDFVVLGCYSGGLYFLCVKTGSQIWNFVIL-ETVKVRAQCDFDGGLIYCGSHDGNFYALDPKTYGCVYKS 131 (354)
T ss_pred CCEEEEEEccCcEEEEEecchhheeeeeeh-hhhccceEEcCCCceEEEecCCCcEEEecccccceEEec
Confidence 567899999999998887643 33333221 111 12234678889999999999999999987766543
No 349
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.76 E-value=1.2e-05 Score=79.14 Aligned_cols=235 Identities=20% Similarity=0.294 Sum_probs=139.4
Q ss_pred CCCeEEEEECCCC--CEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCC-CEEEEec----CCCeEEEEe
Q 010759 213 SKDVTTLDWNGEG--TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKG-DYLLTGS----CDKTAIVWD 282 (502)
Q Consensus 213 ~~~V~~l~~s~~~--~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~-~~l~sgs----~D~~v~iwd 282 (502)
...+.|++++-+. ..++.|..+|.|-+-..... -.....+|..+.++++|++-. +.|++|- .|..+.|||
T Consensus 56 tqy~kcva~~y~~d~cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwd 135 (783)
T KOG1008|consen 56 TQYVKCVASFYGNDRCILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWD 135 (783)
T ss_pred CCCceeehhhcCCchhhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCcccee
Confidence 3457788776543 57888999999998875422 233567788899999999864 3444442 346789999
Q ss_pred ccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
+.++-. .|- ....|.+ +.....++++|-.+.+++.+|.....+.
T Consensus 136 i~s~lt--------vPk------e~~~fs~----------------------~~l~gqns~cwlrd~klvlaGm~sr~~~ 179 (783)
T KOG1008|consen 136 INSLLT--------VPK------ESPLFSS----------------------STLDGQNSVCWLRDTKLVLAGMTSRSVH 179 (783)
T ss_pred cccccC--------CCc------ccccccc----------------------ccccCccccccccCcchhhcccccchhh
Confidence 876521 000 0000100 1112344788888999999999999999
Q ss_pred EEeCCCCce-eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEe-CCCCeE-EEEeeCCC----CCEEE
Q 010759 363 IWNMKQDKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWD-VELGKL-LYSLNGHR----EPVYS 435 (502)
Q Consensus 363 iwd~~~~~~-~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd-~~~~~~-~~~~~~h~----~~v~~ 435 (502)
++|++.... ...+ ....+..+...|-.. .++++- .||.|-+|| .++-+. +..+.... ..+..
T Consensus 180 ifdlRqs~~~~~sv--nTk~vqG~tVdp~~~--------nY~cs~-~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~ 248 (783)
T KOG1008|consen 180 IFDLRQSLDSVSSV--NTKYVQGITVDPFSP--------NYFCSN-SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFA 248 (783)
T ss_pred hhhhhhhhhhhhhh--hhhhcccceecCCCC--------Cceecc-ccCceeeccchhhhccHHHHHhhCCCCcccceee
Confidence 999873321 1111 122344444455221 266654 499999999 444332 22222122 23899
Q ss_pred EEECCCCC-EEEEEeCC-CcEEEEeCCC-C-------eeEEE------EecC---CCEEEEEECCCC--CEEEEEECCCe
Q 010759 436 LAFSPTGE-YLASGSLD-KSMHIWSLKE-G-------KIVKT------YTGN---GGIFEVCWNKEG--DKIAACFANHT 494 (502)
Q Consensus 436 l~~spdg~-~lasgs~D-g~i~iw~~~~-~-------~~~~~------~~~~---~~i~~~~ws~~g--~~la~~~~~~~ 494 (502)
++|.|... .|++.+.| ++|+.+++.. + ..... +.+. ..|..+.||+.. ....++..+-+
T Consensus 249 ~aycPtrtglla~l~RdS~tIrlydi~~v~t~~s~nn~~~~~~~s~~~~q~~~~~s~I~~f~wH~~s~~er~il~~~nl~ 328 (783)
T KOG1008|consen 249 LAYCPTRTGLLAVLSRDSITIRLYDICVVGTEGSANNSVFVNYESKYPVQPNSQCSGIDFFTWHTASPTERQILGVINLQ 328 (783)
T ss_pred EEeccCCcchhhhhccCcceEEEecccccCCcccccccceeeecccccccccccccceeecCcCcCCccceeEEeeccCC
Confidence 99999753 45555554 7899998752 1 01111 2222 357888999976 34444544443
No 350
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.75 E-value=6.1e-05 Score=46.07 Aligned_cols=36 Identities=44% Similarity=0.793 Sum_probs=32.8
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWT 182 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~ 182 (502)
+..+..|...|.+++|+|.+.++++++.|+.+++|+
T Consensus 5 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 5 LKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred EEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456778999999999999999999999999999995
No 351
>smart00320 WD40 WD40 repeats. Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain.
Probab=97.73 E-value=0.00012 Score=44.62 Aligned_cols=39 Identities=54% Similarity=0.961 Sum_probs=34.3
Q ss_pred CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 420 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 420 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
+++...+..|...|+++.|+|.+.++++++.|+.+++|+
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 345666778889999999999999999999999999996
No 352
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.69 E-value=0.043 Score=51.84 Aligned_cols=219 Identities=12% Similarity=0.122 Sum_probs=117.7
Q ss_pred ecCCCCE-EEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec----CC
Q 010759 262 WNKKGDY-LLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA----GH 336 (502)
Q Consensus 262 ~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~----~h 336 (502)
|.++... +.+--..+.|.-|+..++.. ..+.................++++.... +.++......+..+. +.
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~-~~~~~p~~~~~~~~~d~~g~Lv~~~~g~--~~~~~~~~~~~t~~~~~~~~~ 108 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKK-RVFPSPGGFSSGALIDAGGRLIACEHGV--RLLDPDTGGKITLLAEPEDGL 108 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCce-EEEECCCCcccceeecCCCeEEEEcccc--EEEeccCCceeEEeccccCCC
Confidence 4555543 34445556677777665532 2222222111122223334444443332 223333222212111 11
Q ss_pred -CcceeEEEEcCCCCEEEEEeC-----C----CcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 337 -QGEVNCVKWDPTGSLLASCSD-----D----VTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 337 -~~~v~~v~~~p~~~~l~sgs~-----d----g~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
....+.+...|+|.+.++... . ..-.+|-+. .+..+..+..+-..-+.++|||+++ .+.++
T Consensus 109 ~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~--------tly~a 180 (307)
T COG3386 109 PLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGK--------TLYVA 180 (307)
T ss_pred CcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCC--------EEEEE
Confidence 235677888999987665443 0 112455554 3444444444344457899999986 24455
Q ss_pred EeCCCeEEEEeCCC--C----eE-EEEeeCCCCCEEEEEECCCCCEEEEEeCCC-cEEEEeCCCCeeEEEEecC-CCEEE
Q 010759 406 ASFDSTVKLWDVEL--G----KL-LYSLNGHREPVYSLAFSPTGEYLASGSLDK-SMHIWSLKEGKIVKTYTGN-GGIFE 476 (502)
Q Consensus 406 gs~dg~i~iwd~~~--~----~~-~~~~~~h~~~v~~l~~spdg~~lasgs~Dg-~i~iw~~~~~~~~~~~~~~-~~i~~ 476 (502)
=+..+.|.-|++.. + +. ...+....+.--.++...+|.+-+++-.+| .|.+|+.. |+++..+.-. ..+.+
T Consensus 181 DT~~~~i~r~~~d~~~g~~~~~~~~~~~~~~~G~PDG~~vDadG~lw~~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t~ 259 (307)
T COG3386 181 DTPANRIHRYDLDPATGPIGGRRGFVDFDEEPGLPDGMAVDADGNLWVAAVWGGGRVVRFNPD-GKLLGEIKLPVKRPTN 259 (307)
T ss_pred eCCCCeEEEEecCcccCccCCcceEEEccCCCCCCCceEEeCCCCEEEecccCCceEEEECCC-CcEEEEEECCCCCCcc
Confidence 55667787777652 1 11 122222334455677777888776655554 89999988 8888887665 66778
Q ss_pred EEEC-CCCCEEEEEECC
Q 010759 477 VCWN-KEGDKIAACFAN 492 (502)
Q Consensus 477 ~~ws-~~g~~la~~~~~ 492 (502)
++|- |+.+.|...+..
T Consensus 260 ~~FgG~~~~~L~iTs~~ 276 (307)
T COG3386 260 PAFGGPDLNTLYITSAR 276 (307)
T ss_pred ceEeCCCcCEEEEEecC
Confidence 8874 456666555443
No 353
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.67 E-value=0.00025 Score=70.03 Aligned_cols=93 Identities=20% Similarity=0.408 Sum_probs=77.5
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEE-EEEECCCCCEEEEEeCCCcEEEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVY-SLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~spdg~~lasgs~Dg~i~iw 457 (502)
...+..+.|+|.-. ++|.+..+|.|-+..+. .+.++++.-|...++ +++|.|||++||.|=.||+|++.
T Consensus 20 ~~~i~~~ewnP~~d---------LiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~ 89 (665)
T KOG4640|consen 20 PINIKRIEWNPKMD---------LIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLH 89 (665)
T ss_pred ccceEEEEEcCccc---------hhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEE
Confidence 34677888988754 78999999999999887 788889887777777 99999999999999999999999
Q ss_pred eCCCCeeEEE--EecCCCEEEEEECC
Q 010759 458 SLKEGKIVKT--YTGNGGIFEVCWNK 481 (502)
Q Consensus 458 ~~~~~~~~~~--~~~~~~i~~~~ws~ 481 (502)
|+.+|..+.. +.....|..+-|.|
T Consensus 90 Dve~~~~l~~~~~s~e~~is~~~w~~ 115 (665)
T KOG4640|consen 90 DVEKGGRLVSFLFSVETDISKGIWDR 115 (665)
T ss_pred EccCCCceeccccccccchheeeccc
Confidence 9999988877 44455677777763
No 354
>KOG4640 consensus Anaphase-promoting complex (APC), subunit 4 [Cell cycle control, cell division, chromosome partitioning; Posttranslational modification, protein turnover, chaperones]
Probab=97.64 E-value=0.00019 Score=70.77 Aligned_cols=70 Identities=17% Similarity=0.349 Sum_probs=61.0
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cCCCEE-EEEECCCCCEEEEEECCCeEEEEEee
Q 010759 431 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-GNGGIF-EVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~-~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..|.-+.|+|.-..||.+..+|.|.+..+. ...+.+++ ++..+. ++||.|||+.||.|..||+|.+.|+-
T Consensus 21 ~~i~~~ewnP~~dLiA~~t~~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve 92 (665)
T KOG4640|consen 21 INIKRIEWNPKMDLIATRTEKGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVE 92 (665)
T ss_pred cceEEEEEcCccchhheeccCCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEcc
Confidence 347788999999999999999999999988 77788887 444555 99999999999999999999999873
No 355
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=97.57 E-value=0.032 Score=53.68 Aligned_cols=208 Identities=14% Similarity=0.144 Sum_probs=117.6
Q ss_pred eEEEEeccCcceeEEeeecccC-eE---EEecCC-----CceEEEEcC---------C-CeEEEEEcCCC----cceeee
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGP-TL---DVDWRN-----NVSFATSST---------D-NMIYVCKIGEN----RPIKTF 333 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~-~~---~~~~~~-----~~~~~~~~~---------d-~~i~~~~~~~~----~~~~~~ 333 (502)
.|++.|..+.+.+..+...... +. .+.+.. ...++.|.. . |.|+++.+... ..+...
T Consensus 3 ~i~l~d~~~~~~~~~~~l~~~E~~~s~~~~~l~~~~~~~~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i 82 (321)
T PF03178_consen 3 SIRLVDPTTFEVLDSFELEPNEHVTSLCSVKLKGDSTGKKEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLI 82 (321)
T ss_dssp EEEEEETTTSSEEEEEEEETTEEEEEEEEEEETTS---SSEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEE
T ss_pred EEEEEeCCCCeEEEEEECCCCceEEEEEEEEEcCccccccCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEE
Confidence 5777887777766666554432 22 223332 333443321 2 88999999874 222222
Q ss_pred --cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc-eeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 334 --AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK-YVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 334 --~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
....++|.+++-. .+. |+.+. .+.|.+|++...+ ....-. .....+.++....+ +++.|..-
T Consensus 83 ~~~~~~g~V~ai~~~-~~~-lv~~~-g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~~~~~-----------~I~vgD~~ 148 (321)
T PF03178_consen 83 HSTEVKGPVTAICSF-NGR-LVVAV-GNKLYVYDLDNSKTLLKKAFYDSPFYITSLSVFKN-----------YILVGDAM 148 (321)
T ss_dssp EEEEESS-EEEEEEE-TTE-EEEEE-TTEEEEEEEETTSSEEEEEEE-BSSSEEEEEEETT-----------EEEEEESS
T ss_pred EEEeecCcceEhhhh-CCE-EEEee-cCEEEEEEccCcccchhhheecceEEEEEEecccc-----------EEEEEEcc
Confidence 2346788888766 444 44333 4789999988776 432211 12235566654422 67778877
Q ss_pred CeEEEEeCCC-CeEEEEe--eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC-------C--eeE--EEEecCCCEE
Q 010759 410 STVKLWDVEL-GKLLYSL--NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE-------G--KIV--KTYTGNGGIF 475 (502)
Q Consensus 410 g~i~iwd~~~-~~~~~~~--~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~-------~--~~~--~~~~~~~~i~ 475 (502)
..+.++.++. ...+..+ ......++++.|-+++..++.+..+|.|.++.... + ++. ..+.-...|+
T Consensus 149 ~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~ 228 (321)
T PF03178_consen 149 KSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVN 228 (321)
T ss_dssp SSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EE
T ss_pred cCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEEEEEECCCCcccccccccceeEEEEECCCccc
Confidence 7788774432 2322222 22345688999987777999999999999998762 2 222 2233344577
Q ss_pred EE---EECC--CCC------EEEEEECCCeEEEE
Q 010759 476 EV---CWNK--EGD------KIAACFANHTVCVL 498 (502)
Q Consensus 476 ~~---~ws~--~g~------~la~~~~~~~v~v~ 498 (502)
++ +..| .+. .++.++.+|.|.++
T Consensus 229 ~~~~~~l~~~~~~~~~~~~~~i~~~T~~G~Ig~l 262 (321)
T PF03178_consen 229 SFRRGSLIPRSGSSESPNRPQILYGTVDGSIGVL 262 (321)
T ss_dssp EEEE--SS--SSSS-TTEEEEEEEEETTS-EEEE
T ss_pred eEEEEEeeecCCCCcccccceEEEEecCCEEEEE
Confidence 76 5556 222 48889999998743
No 356
>PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1.4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). RCH2NH2 + H2O + acceptor = RCHO + NH3 + reduced acceptor MADH is a hetero-tetramer, comprised of two heavy subunits and two light subunits. The heavy subunit forms a seven-bladed beta-propeller like structure [].; GO: 0030058 amine dehydrogenase activity, 0030416 methylamine metabolic process, 0055114 oxidation-reduction process, 0042597 periplasmic space; PDB: 3RN1_F 3SVW_F 3PXT_F 3L4O_F 3L4M_D 3SJL_F 3PXS_D 3ORV_F 3RMZ_F 3RLM_F ....
Probab=97.53 E-value=0.083 Score=49.76 Aligned_cols=252 Identities=15% Similarity=0.152 Sum_probs=138.0
Q ss_pred cEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEec----------CCCeEEEEeccCcceeEEeeeccc-CeEEEe
Q 010759 236 QARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKTEEWKQQFEFHSG-PTLDVD 303 (502)
Q Consensus 236 ~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs----------~D~~v~iwd~~~~~~~~~~~~~~~-~~~~~~ 303 (502)
.+.+.|.... .+-.+.. +-.-.+..+|+++.+++++ ..-.|.+||..+-.....+..... ....+
T Consensus 18 rv~viD~d~~k~lGmi~~--g~~~~~~~spdgk~~y~a~T~~sR~~rG~RtDvv~~~D~~TL~~~~EI~iP~k~R~~~~- 94 (342)
T PF06433_consen 18 RVYVIDADSGKLLGMIDT--GFLGNVALSPDGKTIYVAETFYSRGTRGERTDVVEIWDTQTLSPTGEIEIPPKPRAQVV- 94 (342)
T ss_dssp EEEEEETTTTEEEEEEEE--ESSEEEEE-TTSSEEEEEEEEEEETTEEEEEEEEEEEETTTTEEEEEEEETTS-B--BS-
T ss_pred eEEEEECCCCcEEEEeec--ccCCceeECCCCCEEEEEEEEEeccccccceeEEEEEecCcCcccceEecCCcchheec-
Confidence 5677776543 2222221 1122355689999887653 234588999999877766655443 11111
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce-------eEEEEcCCC-CEEEEEeCCCcEEEEeCC-CCceeee
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-------NCVKWDPTG-SLLASCSDDVTAKIWNMK-QDKYVHD 374 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v-------~~v~~~p~~-~~l~sgs~dg~i~iwd~~-~~~~~~~ 374 (502)
.....+..+.+++.+++++......+....-....+ -|.-.-|.+ .-|.+-+.||.+.-..+. .++....
T Consensus 95 -~~~~~~~ls~dgk~~~V~N~TPa~SVtVVDl~~~kvv~ei~~PGC~~iyP~~~~~F~~lC~DGsl~~v~Ld~~Gk~~~~ 173 (342)
T PF06433_consen 95 -PYKNMFALSADGKFLYVQNFTPATSVTVVDLAAKKVVGEIDTPGCWLIYPSGNRGFSMLCGDGSLLTVTLDADGKEAQK 173 (342)
T ss_dssp ---GGGEEE-TTSSEEEEEEESSSEEEEEEETTTTEEEEEEEGTSEEEEEEEETTEEEEEETTSCEEEEEETSTSSEEEE
T ss_pred -ccccceEEccCCcEEEEEccCCCCeEEEEECCCCceeeeecCCCEEEEEecCCCceEEEecCCceEEEEECCCCCEeEe
Confidence 123345566677777777776554443333222211 133333433 457788889998888776 4443321
Q ss_pred cccCCCcEEEEEEccCCCCCC-CC-----CCcEEEEEEeCCCeEEEEeCCCCeEEE--EeeCC----------CCCEEEE
Q 010759 375 LREHSKEIYTIRWSPTGSGTN-NP-----NQQLILASASFDSTVKLWDVELGKLLY--SLNGH----------REPVYSL 436 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~-~~-----~~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~~h----------~~~v~~l 436 (502)
. +-.|.++....+ +| ...+++ -+..|.|+--|+....... .+.-. .+...-+
T Consensus 174 ~--------t~~F~~~~dp~f~~~~~~~~~~~~~F--~Sy~G~v~~~dlsg~~~~~~~~~~~~t~~e~~~~WrPGG~Q~~ 243 (342)
T PF06433_consen 174 S--------TKVFDPDDDPLFEHPAYSRDGGRLYF--VSYEGNVYSADLSGDSAKFGKPWSLLTDAEKADGWRPGGWQLI 243 (342)
T ss_dssp E--------EEESSTTTS-B-S--EEETTTTEEEE--EBTTSEEEEEEETTSSEEEEEEEESS-HHHHHTTEEE-SSS-E
T ss_pred e--------ccccCCCCcccccccceECCCCeEEE--EecCCEEEEEeccCCcccccCcccccCccccccCcCCcceeee
Confidence 1 112333221111 10 112232 5688999888877554322 12110 0123347
Q ss_pred EECCCCCEEEEE---eCCC-------cEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEEEE-ECCCeEEEEEee
Q 010759 437 AFSPTGEYLASG---SLDK-------SMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIAAC-FANHTVCVLDFR 501 (502)
Q Consensus 437 ~~spdg~~lasg---s~Dg-------~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la~~-~~~~~v~v~~~~ 501 (502)
++++....|..- +.++ .|.++|+.+++.+..+.....+.+++.+.+.+ +|.+. ..++.+.|||..
T Consensus 244 A~~~~~~rlyvLMh~g~~gsHKdpgteVWv~D~~t~krv~Ri~l~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~ 320 (342)
T PF06433_consen 244 AYHAASGRLYVLMHQGGEGSHKDPGTEVWVYDLKTHKRVARIPLEHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAA 320 (342)
T ss_dssp EEETTTTEEEEEEEE--TT-TTS-EEEEEEEETTTTEEEEEEEEEEEESEEEEESSSS-EEEEEETTTTEEEEEETT
T ss_pred eeccccCeEEEEecCCCCCCccCCceEEEEEECCCCeEEEEEeCCCccceEEEccCCCcEEEEEcCCCCeEEEEeCc
Confidence 787755444332 2222 58889999999999988767788999999987 55444 457899999964
No 357
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.50 E-value=0.046 Score=53.69 Aligned_cols=269 Identities=13% Similarity=0.118 Sum_probs=135.0
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC---cc----
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---EE---- 287 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~---~~---- 287 (502)
.|+.+.|+++..-|+.|...|.|-||......... ..-..+-....+.+- ...++.-.+-|+.. ..
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~-~~~~~~~~~~~~~~~------~~~~~~~~l~di~~r~~~~~~~g 75 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYG-NREQPPDLDYNFRRF------SLNNSPGKLTDISDRAPPSLKEG 75 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE-------------------S--------GGGSS-SEEE-GGG--TT-SEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCC-ccCCCcccCcccccc------cccCCCcceEEehhhCCcccccc
Confidence 38899999999999999999999999753211100 000001111111110 00111222223221 11
Q ss_pred e--eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceee--ecC------CCcceeEEEEcC-----CC---
Q 010759 288 W--KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT--FAG------HQGEVNCVKWDP-----TG--- 349 (502)
Q Consensus 288 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~--~~~------h~~~v~~v~~~p-----~~--- 349 (502)
+ ...+....+++.++...+-..++.+..+|.+.++|++.+..+.. +.. ....++++.|.. |+
T Consensus 76 f~P~~l~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySS 155 (395)
T PF08596_consen 76 FLPLTLLDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSS 155 (395)
T ss_dssp EEEEEEE---S-SEEEEEE-BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEE
T ss_pred cCchhheeccCCcEeEEecCCCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccc
Confidence 1 11233446788888887777778888999999999988766543 112 123577888762 33
Q ss_pred CEEEEEeCCCcEEEEeCCC---Cceee----ecccCCCcEEEEE-EccC-CCCCC------------CCCCcEEEEEEeC
Q 010759 350 SLLASCSDDVTAKIWNMKQ---DKYVH----DLREHSKEIYTIR-WSPT-GSGTN------------NPNQQLILASASF 408 (502)
Q Consensus 350 ~~l~sgs~dg~i~iwd~~~---~~~~~----~~~~~~~~i~~~~-~sp~-g~~~~------------~~~~~~~l~sgs~ 408 (502)
-.+++|+..|.+.+|.+.- +.... ....+..++..+. +..+ |.... ...+. +++.+ .
T Consensus 156 i~L~vGTn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g-~vVvv-S 233 (395)
T PF08596_consen 156 ICLLVGTNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPG-YVVVV-S 233 (395)
T ss_dssp EEEEEEETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----E-EEEEE--
T ss_pred eEEEEEeCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCc-EEEEE-c
Confidence 4688999999999997641 22221 1123456666554 3222 21110 01112 33333 3
Q ss_pred CCeEEEEeCCCCeEEEEeeCCCCCEEEEEE-----CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-----CEEEEE
Q 010759 409 DSTVKLWDVELGKLLYSLNGHREPVYSLAF-----SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-----GIFEVC 478 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-----spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-----~i~~~~ 478 (502)
+..||++...+.+..+......-....+.+ ...+..|++-..+|.|++|.+..-+.+....-.. .+...+
T Consensus 234 e~~irv~~~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~l~~~~d~~~~~~ss 313 (395)
T PF08596_consen 234 ESDIRVFKPPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVSLPPPLDSRRLSSSS 313 (395)
T ss_dssp SSEEEEE-TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE-SS---HHHHTT-E
T ss_pred ccceEEEeCCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhcccCCCccccccccccE
Confidence 667999999888776655422223334445 2356788889999999999999877776654322 234567
Q ss_pred ECCCCCEEEEEECC
Q 010759 479 WNKEGDKIAACFAN 492 (502)
Q Consensus 479 ws~~g~~la~~~~~ 492 (502)
++++|+.+.-.+..
T Consensus 314 is~~Gdi~~~~gps 327 (395)
T PF08596_consen 314 ISRNGDIFYWTGPS 327 (395)
T ss_dssp E-TTS-EEEE-SSS
T ss_pred ECCCCCEEEEeCcc
Confidence 79999877766543
No 358
>PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals. The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A.
Probab=97.50 E-value=0.024 Score=55.60 Aligned_cols=220 Identities=15% Similarity=0.193 Sum_probs=118.2
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCC-CCCC--------------CCceEEEEEee-----------eccc
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNG-GAQN--------------GPLNVLVLKHV-----------KGRT 209 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~-~~~~--------------~~~~~~~~~~~-----------~~~~ 209 (502)
.|+.+.|.++..-|+.|-..|.|-||.+....... .... .+-.+..+... ....
T Consensus 3 ~v~~vs~a~~t~Elav~~~~GeVv~~k~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~l~di~~r~~~~~~~gf~P~~l~ 82 (395)
T PF08596_consen 3 SVTHVSFAPETLELAVGLESGEVVLFKFGKNQNYGNREQPPDLDYNFRRFSLNNSPGKLTDISDRAPPSLKEGFLPLTLL 82 (395)
T ss_dssp -EEEEEEETTTTEEEEEETTS-EEEEEEEE------------------S--GGGSS-SEEE-GGG--TT-SEEEEEEEEE
T ss_pred eEEEEEecCCCceEEEEccCCcEEEEEcccCCCCCccCCCcccCcccccccccCCCcceEEehhhCCcccccccCchhhe
Confidence 58899999998889999999999999876543322 0000 01111111110 0011
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeE---eecC------CCCCEEEEEecC-----CC---CEEEEe
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC---TLSK------HKGPIFSLKWNK-----KG---DYLLTG 272 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~---~~~~------h~~~V~~l~~~~-----~~---~~l~sg 272 (502)
....++|++++.| +=-+++.|+.+|.+.|.|..+..+. .+.. ....|+++.|.. ++ -.|++|
T Consensus 83 ~~~~g~vtal~~S-~iGFvaigy~~G~l~viD~RGPavI~~~~i~~~~~~~~~~~~vt~ieF~vm~~~~D~ySSi~L~vG 161 (395)
T PF08596_consen 83 DAKQGPVTALKNS-DIGFVAIGYESGSLVVIDLRGPAVIYNENIRESFLSKSSSSYVTSIEFSVMTLGGDGYSSICLLVG 161 (395)
T ss_dssp ---S-SEEEEEE--BTSEEEEEETTSEEEEEETTTTEEEEEEEGGG--T-SS----EEEEEEEEEE-TTSSSEEEEEEEE
T ss_pred eccCCcEeEEecC-CCcEEEEEecCCcEEEEECCCCeEEeeccccccccccccccCeeEEEEEEEecCCCcccceEEEEE
Confidence 2236789999997 4558999999999999999775332 1222 234678888862 22 468899
Q ss_pred cCCCeEEEEecc---CcceeEEee----ecccCeEEEecC---CC-------------------ceEEEEcCCCeEEEEE
Q 010759 273 SCDKTAIVWDVK---TEEWKQQFE----FHSGPTLDVDWR---NN-------------------VSFATSSTDNMIYVCK 323 (502)
Q Consensus 273 s~D~~v~iwd~~---~~~~~~~~~----~~~~~~~~~~~~---~~-------------------~~~~~~~~d~~i~~~~ 323 (502)
...|.+.+|.+. .+.+...+. .+.+++..+..- .. ..++....+..++++.
T Consensus 162 Tn~G~v~~fkIlp~~~g~f~v~~~~~~~~~~~~i~~I~~i~~~~G~~a~At~~~~~~l~~g~~i~g~vVvvSe~~irv~~ 241 (395)
T PF08596_consen 162 TNSGNVLTFKILPSSNGRFSVQFAGATTNHDSPILSIIPINADTGESALATISAMQGLSKGISIPGYVVVVSESDIRVFK 241 (395)
T ss_dssp ETTSEEEEEEEEE-GGG-EEEEEEEEE--SS----EEEEEETTT--B-B-BHHHHHGGGGT----EEEEEE-SSEEEEE-
T ss_pred eCCCCEEEEEEecCCCCceEEEEeeccccCCCceEEEEEEECCCCCcccCchhHhhccccCCCcCcEEEEEcccceEEEe
Confidence 999999999764 133333332 233444443321 00 1245555677788888
Q ss_pred cCCCcceeeecCCCcceeEEEE-----cCCCCEEEEEeCCCcEEEEeCCCCceeeecc
Q 010759 324 IGENRPIKTFAGHQGEVNCVKW-----DPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 324 ~~~~~~~~~~~~h~~~v~~v~~-----~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 376 (502)
....+.........-....+.+ ...+..|++-..+|.|++|.+..-+.+..+.
T Consensus 242 ~~~~k~~~K~~~~~~~~~~~~vv~~~~~~~~~~Lv~l~~~G~i~i~SLP~Lkei~~~~ 299 (395)
T PF08596_consen 242 PPKSKGAHKSFDDPFLCSSASVVPTISRNGGYCLVCLFNNGSIRIYSLPSLKEIKSVS 299 (395)
T ss_dssp TT---EEEEE-SS-EEEEEEEEEEEE-EEEEEEEEEEETTSEEEEEETTT--EEEEEE
T ss_pred CCCCcccceeeccccccceEEEEeecccCCceEEEEEECCCcEEEEECCCchHhhccc
Confidence 7765544332222112223344 2356678888999999999998777665544
No 359
>PRK13616 lipoprotein LpqB; Provisional
Probab=97.49 E-value=0.0058 Score=63.18 Aligned_cols=179 Identities=12% Similarity=0.155 Sum_probs=92.6
Q ss_pred CCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe------CCCcEEEEeCCCCceeeecccCCCcEEEEEEcc
Q 010759 316 DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP 389 (502)
Q Consensus 316 d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp 389 (502)
++.+...+-....++.-..+....+..++++|+|+.++... .|+.-.||-...+.....+.. ......-.|+|
T Consensus 328 ~G~l~~~~~~~~~pv~g~~g~~~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~~~lt~-g~~~t~PsWsp 406 (591)
T PRK13616 328 DGSLVSVDGQGVTPVPGAFGQMGNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVAVQVLE-GHSLTRPSWSL 406 (591)
T ss_pred CCeEEEecCCCeeeCCCccccccCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcceeeec-CCCCCCceECC
Confidence 44444433222223322223334678899999999887665 244444443222221122221 22367788999
Q ss_pred CCCCCCC--CCCcEEEEE-EeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEE---EeCCCCe
Q 010759 390 TGSGTNN--PNQQLILAS-ASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHI---WSLKEGK 463 (502)
Q Consensus 390 ~g~~~~~--~~~~~~l~s-gs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~i---w~~~~~~ 463 (502)
+|..... .......++ ....+.+.+.++..+.... .....|..+.|||||..||... +|.|.+ -....|.
T Consensus 407 DG~~lw~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~---~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~ 482 (591)
T PRK13616 407 DADAVWVVVDGNTVVRVIRDPATGQLARTPVDASAVAS---RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQ 482 (591)
T ss_pred CCCceEEEecCcceEEEeccCCCceEEEEeccCchhhh---ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCc
Confidence 9752100 000011111 1123344444554443322 2345799999999999887655 477777 4434454
Q ss_pred e-E---EEE-ecCCC-EEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 464 I-V---KTY-TGNGG-IFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 464 ~-~---~~~-~~~~~-i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
. + ..+ ...+. +.++.|.+++.++ .+..++...||-+
T Consensus 483 ~~l~~~~~l~~~l~~~~~~l~W~~~~~L~-V~~~~~~~~v~~v 524 (591)
T PRK13616 483 YALTNPREVGPGLGDTAVSLDWRTGDSLV-VGRSDPEHPVWYV 524 (591)
T ss_pred eeecccEEeecccCCccccceEecCCEEE-EEecCCCCceEEE
Confidence 1 1 112 22333 5789999999865 4444444455544
No 360
>TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens.
Probab=97.48 E-value=0.12 Score=53.10 Aligned_cols=230 Identities=14% Similarity=0.114 Sum_probs=124.4
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEEeeeccc----CeEE-EecCCCceEEEEc-----CCCeEEEEEcCCCcceeeecC
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG----PTLD-VDWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~ 335 (502)
+..++.++.|+.+.-.|..+++.+-.+..... .+.+ -...++..++..+ .++.|+.++..+++.+-.+..
T Consensus 120 ~~~v~v~t~dg~l~ALDa~TGk~~W~~~~~~~~~~~~~tssP~v~~g~Vivg~~~~~~~~~G~v~AlD~~TG~~lW~~~~ 199 (527)
T TIGR03075 120 DGKVFFGTLDARLVALDAKTGKVVWSKKNGDYKAGYTITAAPLVVKGKVITGISGGEFGVRGYVTAYDAKTGKLVWRRYT 199 (527)
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEeecccccccccccccCCcEEECCEEEEeecccccCCCcEEEEEECCCCceeEeccC
Confidence 35678888999999999999987655432110 0100 0011333343322 257788777776654322110
Q ss_pred ------------------------------C-Ccce-eEEEEcCCCCEEEEEeCC-----C-----------cEEEEeCC
Q 010759 336 ------------------------------H-QGEV-NCVKWDPTGSLLASCSDD-----V-----------TAKIWNMK 367 (502)
Q Consensus 336 ------------------------------h-~~~v-~~v~~~p~~~~l~sgs~d-----g-----------~i~iwd~~ 367 (502)
+ .+.+ ..+.+.|...+|+.+..+ + .|.--|++
T Consensus 200 ~p~~~~~~~~~~~~~~~~~~~~tw~~~~~~~gg~~~W~~~s~D~~~~lvy~~tGnp~p~~~~~r~gdnl~~~s~vAld~~ 279 (527)
T TIGR03075 200 VPGDMGYLDKADKPVGGEPGAKTWPGDAWKTGGGATWGTGSYDPETNLIYFGTGNPSPWNSHLRPGDNLYTSSIVARDPD 279 (527)
T ss_pred cCCCcccccccccccccccccCCCCCCccccCCCCccCceeEcCCCCeEEEeCCCCCCCCCCCCCCCCccceeEEEEccc
Confidence 0 0111 134666666666655522 2 44555777
Q ss_pred CCceeeecccCCCcEEEEE---------EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe--eC--------
Q 010759 368 QDKYVHDLREHSKEIYTIR---------WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL--NG-------- 428 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~---------~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~~-------- 428 (502)
+++..-.++.....++... ...+|. ...+++.+..+|.+.+.|.++|+.+... ..
T Consensus 280 TG~~~W~~Q~~~~D~wD~d~~~~p~l~d~~~~G~------~~~~v~~~~K~G~~~vlDr~tG~~i~~~~~~~~~~w~~~~ 353 (527)
T TIGR03075 280 TGKIKWHYQTTPHDEWDYDGVNEMILFDLKKDGK------PRKLLAHADRNGFFYVLDRTNGKLLSAEPFVDTVNWATGV 353 (527)
T ss_pred cCCEEEeeeCCCCCCccccCCCCcEEEEeccCCc------EEEEEEEeCCCceEEEEECCCCceeccccccCCccccccc
Confidence 7877655543222222111 111221 1247788999999999999999886321 00
Q ss_pred --CC-CCE----------------------------EEEEECCCCCEEEEEeC---------------------------
Q 010759 429 --HR-EPV----------------------------YSLAFSPTGEYLASGSL--------------------------- 450 (502)
Q Consensus 429 --h~-~~v----------------------------~~l~~spdg~~lasgs~--------------------------- 450 (502)
.. .++ ..++|+|...++.....
T Consensus 354 ~~~~g~p~~~~~~~~~~~~~~~~~~~~Pg~~Gg~~W~~~A~Dp~~g~~yvp~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 433 (527)
T TIGR03075 354 DLKTGRPIEVPEARSADGKKGKPVGVCPGFLGGKNWQPMAYSPKTGLFYVPANEVCMDYEPEKVSYKKGAAYLGAGLTIK 433 (527)
T ss_pred CCCCCCCccChhhCcCCCCCCCeeEECCCCcCCCCCCCceECCCCCEEEEecccccccccccccccCCCCceeccccccC
Confidence 00 000 12566665554433222
Q ss_pred ------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 451 ------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 451 ------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
-|.|.-+|+.+|+++..+........-.....|..+.++..+|.++.||.+
T Consensus 434 p~~~~~~g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~ 490 (527)
T TIGR03075 434 PPPDDHMGSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAK 490 (527)
T ss_pred CCCCCCceeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECC
Confidence 256888888888888766533221111122355677777888999888864
No 361
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.44 E-value=0.025 Score=43.78 Aligned_cols=91 Identities=13% Similarity=0.181 Sum_probs=65.0
Q ss_pred EEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEE-
Q 010759 401 LILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCW- 479 (502)
Q Consensus 401 ~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~w- 479 (502)
.-|+.||.|..||+|+-. ..+.++..+ ..|++|+-... ..++-|-.+|+|-+|+-. ..+........++++++
T Consensus 16 ~eLlvGs~D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~-~~F~Y~l~NGTVGvY~~~--~RlWRiKSK~~~~~~~~~ 89 (111)
T PF14783_consen 16 NELLVGSDDFEIRVFKGD--EIVAEITET-DKVTSLCSLGG-GRFAYALANGTVGVYDRS--QRLWRIKSKNQVTSMAFY 89 (111)
T ss_pred ceEEEecCCcEEEEEeCC--cEEEEEecc-cceEEEEEcCC-CEEEEEecCCEEEEEeCc--ceeeeeccCCCeEEEEEE
Confidence 367889999999999754 677777744 56788877665 568888999999999753 33444445555666554
Q ss_pred --CCCC-CEEEEEECCCeEEE
Q 010759 480 --NKEG-DKIAACFANHTVCV 497 (502)
Q Consensus 480 --s~~g-~~la~~~~~~~v~v 497 (502)
+.|| ..|++|-.||.|-+
T Consensus 90 D~~gdG~~eLI~GwsnGkve~ 110 (111)
T PF14783_consen 90 DINGDGVPELIVGWSNGKVEV 110 (111)
T ss_pred cCCCCCceEEEEEecCCeEEe
Confidence 3344 38999999998743
No 362
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.42 E-value=0.0043 Score=65.23 Aligned_cols=135 Identities=13% Similarity=0.177 Sum_probs=93.0
Q ss_pred cCCCeEEEEEcCCCcceeeecCCCcc-eeEEEEcC-----CCCEEEEEeCCCcEEEEeCCCCc--eeee-cc--cCCCcE
Q 010759 314 STDNMIYVCKIGENRPIKTFAGHQGE-VNCVKWDP-----TGSLLASCSDDVTAKIWNMKQDK--YVHD-LR--EHSKEI 382 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~p-----~~~~l~sgs~dg~i~iwd~~~~~--~~~~-~~--~~~~~i 382 (502)
...+.++-+|+..++.+..+..|... |..++-.. +....+.|-.+..+..||.+-.. ++.. .. ......
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tflGls~n~lfriDpR~~~~k~v~~~~k~Y~~~~~F 580 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFLGLSDNSLFRIDPRLSGNKLVDSQSKQYSSKNNF 580 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEEEECCCceEEeccCCCCCceeeccccccccCCCc
Confidence 45688999999999999999877643 54443211 12345667788899999988532 3311 11 123345
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
.|++-+.+| +||.||.+|.||+||--..+....+.+...||..|..+.||+||++.+ +..|.++++
T Consensus 581 s~~aTt~~G----------~iavgs~~G~IRLyd~~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc-~tyLlLi~t 646 (794)
T PF08553_consen 581 SCFATTEDG----------YIAVGSNKGDIRLYDRLGKRAKTALPGLGDPIIGIDVTADGKWILATC-KTYLLLIDT 646 (794)
T ss_pred eEEEecCCc----------eEEEEeCCCcEEeecccchhhhhcCCCCCCCeeEEEecCCCcEEEEee-cceEEEEEE
Confidence 666666666 689999999999999432222334667789999999999999988766 446666664
No 363
>COG3386 Gluconolactonase [Carbohydrate transport and metabolism]
Probab=97.42 E-value=0.12 Score=48.90 Aligned_cols=213 Identities=15% Similarity=0.147 Sum_probs=104.7
Q ss_pred ECCCCC-EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc---
Q 010759 221 WNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS--- 296 (502)
Q Consensus 221 ~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~--- 296 (502)
|.++.. ++.+--..+.|.-|+........+... +.+.++.....+..|+++. .-+.++++.++..+..+....
T Consensus 32 w~~~~~~L~w~DI~~~~i~r~~~~~g~~~~~~~p-~~~~~~~~~d~~g~Lv~~~--~g~~~~~~~~~~~~t~~~~~~~~~ 108 (307)
T COG3386 32 WDPDRGALLWVDILGGRIHRLDPETGKKRVFPSP-GGFSSGALIDAGGRLIACE--HGVRLLDPDTGGKITLLAEPEDGL 108 (307)
T ss_pred CcCCCCEEEEEeCCCCeEEEecCCcCceEEEECC-CCcccceeecCCCeEEEEc--cccEEEeccCCceeEEeccccCCC
Confidence 455554 444555667777887764444444332 3334444434444555553 345666665555432221111
Q ss_pred --cCeEEEecCCCceEEEEcCC----------CeEEEEEcC-CCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEE
Q 010759 297 --GPTLDVDWRNNVSFATSSTD----------NMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAK 362 (502)
Q Consensus 297 --~~~~~~~~~~~~~~~~~~~d----------~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~ 362 (502)
...++........|..+... ..-.+|.+. .+..++.+.++-..-+.++||||++.++.+.. .+.|.
T Consensus 109 ~~~r~ND~~v~pdG~~wfgt~~~~~~~~~~~~~~G~lyr~~p~g~~~~l~~~~~~~~NGla~SpDg~tly~aDT~~~~i~ 188 (307)
T COG3386 109 PLNRPNDGVVDPDGRIWFGDMGYFDLGKSEERPTGSLYRVDPDGGVVRLLDDDLTIPNGLAFSPDGKTLYVADTPANRIH 188 (307)
T ss_pred CcCCCCceeEcCCCCEEEeCCCccccCccccCCcceEEEEcCCCCEEEeecCcEEecCceEECCCCCEEEEEeCCCCeEE
Confidence 11122222222333322222 011344443 34445555555566789999999977665544 46777
Q ss_pred EEeCCC--Cce-----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC-eEEEEeCCCCeEEEEeeCCCCCEE
Q 010759 363 IWNMKQ--DKY-----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-TVKLWDVELGKLLYSLNGHREPVY 434 (502)
Q Consensus 363 iwd~~~--~~~-----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~h~~~v~ 434 (502)
-|++.. +.. ...+....+ .|+|... ..+..+++ ++-.+| .|..|+.. ++++..+.-....++
T Consensus 189 r~~~d~~~g~~~~~~~~~~~~~~~G-------~PDG~~v-DadG~lw~-~a~~~g~~v~~~~pd-G~l~~~i~lP~~~~t 258 (307)
T COG3386 189 RYDLDPATGPIGGRRGFVDFDEEPG-------LPDGMAV-DADGNLWV-AAVWGGGRVVRFNPD-GKLLGEIKLPVKRPT 258 (307)
T ss_pred EEecCcccCccCCcceEEEccCCCC-------CCCceEE-eCCCCEEE-ecccCCceEEEECCC-CcEEEEEECCCCCCc
Confidence 776652 110 001111111 2333211 11122333 333443 89999988 888887775556778
Q ss_pred EEEEC-CCCCEEE
Q 010759 435 SLAFS-PTGEYLA 446 (502)
Q Consensus 435 ~l~~s-pdg~~la 446 (502)
+++|- |+.+.|.
T Consensus 259 ~~~FgG~~~~~L~ 271 (307)
T COG3386 259 NPAFGGPDLNTLY 271 (307)
T ss_pred cceEeCCCcCEEE
Confidence 88884 4444443
No 364
>PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins. Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ].
Probab=97.41 E-value=0.0074 Score=63.47 Aligned_cols=138 Identities=19% Similarity=0.241 Sum_probs=91.4
Q ss_pred eCCCcEEEEeCCCCceeeecccCCCc-EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeC----C
Q 010759 356 SDDVTAKIWNMKQDKYVHDLREHSKE-IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNG----H 429 (502)
Q Consensus 356 s~dg~i~iwd~~~~~~~~~~~~~~~~-i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~----h 429 (502)
.....++-.|+..|+.+..+..+... |.. +.|+.........+.+ .|-.++.+..||.+.. ..+..-.. .
T Consensus 501 ~~~~~ly~mDLe~GKVV~eW~~~~~~~v~~--~~p~~K~aqlt~e~tf--lGls~n~lfriDpR~~~~k~v~~~~k~Y~~ 576 (794)
T PF08553_consen 501 NNPNKLYKMDLERGKVVEEWKVHDDIPVVD--IAPDSKFAQLTNEQTF--LGLSDNSLFRIDPRLSGNKLVDSQSKQYSS 576 (794)
T ss_pred CCCCceEEEecCCCcEEEEeecCCCcceeE--ecccccccccCCCceE--EEECCCceEEeccCCCCCceeecccccccc
Confidence 35577888999999999998877643 444 4465443322223333 4667888999999853 22211111 2
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-Eec-CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 430 REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-YTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 430 ~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
....+|++-+.+| +||.||.+|.|++||. .|+.-++ +++ ..+|.+|+-+.||++|++.+.. .+.+++.
T Consensus 577 ~~~Fs~~aTt~~G-~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~DGkwilaTc~t-yLlLi~t 646 (794)
T PF08553_consen 577 KNNFSCFATTEDG-YIAVGSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTADGKWILATCKT-YLLLIDT 646 (794)
T ss_pred CCCceEEEecCCc-eEEEEeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCCCcEEEEeecc-eEEEEEE
Confidence 3457788877766 7899999999999994 3443333 344 4579999999999977665543 5556553
No 365
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.40 E-value=0.1 Score=47.62 Aligned_cols=198 Identities=13% Similarity=0.209 Sum_probs=111.3
Q ss_pred eecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecc-cCeEEEecCCCceEEEEc-CCCeEEEEEcC
Q 010759 249 TLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRNNVSFATSS-TDNMIYVCKIG 325 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~d~~i~~~~~~ 325 (502)
.+.+-...+.+|+|+|+.+ .+++....+.|...++ .++.++.+.... +..-.+.+..+..|+... .++.++++.+.
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~-~G~vlr~i~l~g~~D~EgI~y~g~~~~vl~~Er~~~L~~~~~~ 94 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSL-DGKVLRRIPLDGFGDYEGITYLGNGRYVLSEERDQRLYIFTID 94 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEET-T--EEEEEE-SS-SSEEEEEE-STTEEEEEETTTTEEEEEEE-
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcC-CCCEEEEEeCCCCCCceeEEEECCCEEEEEEcCCCcEEEEEEe
Confidence 4455566799999999866 5566777888888886 577777776554 556778887777776655 58888888874
Q ss_pred CCc---ce---eeec-----CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC---Cceee--e------cccCCCcEE
Q 010759 326 ENR---PI---KTFA-----GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ---DKYVH--D------LREHSKEIY 383 (502)
Q Consensus 326 ~~~---~~---~~~~-----~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~---~~~~~--~------~~~~~~~i~ 383 (502)
... .. ..+. .+...+-.++|.|.++.|+.+-+..-..||.++. ...+. . .......+.
T Consensus 95 ~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~S 174 (248)
T PF06977_consen 95 DDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVSDDQDLDDDKLFVRDLS 174 (248)
T ss_dssp ---TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEEE-HHHH-HT--SS---
T ss_pred ccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeeccccccccccceecccc
Confidence 321 11 1111 2345688999999887777777777777776653 11111 1 111233467
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe--eC--C-----CCCEEEEEECCCCCEEEEEeCCCcE
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL--NG--H-----REPVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~~--h-----~~~v~~l~~spdg~~lasgs~Dg~i 454 (502)
++.+.|... .+++.......|..+| ..|+.+..+ .. | -..--.|+|.++|++.++ |.-+..
T Consensus 175 ~l~~~p~t~--------~lliLS~es~~l~~~d-~~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYIv-sEpNlf 244 (248)
T PF06977_consen 175 GLSYDPRTG--------HLLILSDESRLLLELD-RQGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYIV-SEPNLF 244 (248)
T ss_dssp EEEEETTTT--------EEEEEETTTTEEEEE--TT--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEEE-ETTTEE
T ss_pred ceEEcCCCC--------eEEEEECCCCeEEEEC-CCCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEEE-cCCceE
Confidence 788877643 3555567788899999 557765543 32 1 023678999999976555 455555
Q ss_pred EEE
Q 010759 455 HIW 457 (502)
Q Consensus 455 ~iw 457 (502)
++|
T Consensus 245 y~f 247 (248)
T PF06977_consen 245 YRF 247 (248)
T ss_dssp EEE
T ss_pred EEe
Confidence 554
No 366
>KOG1008 consensus Uncharacterized conserved protein, contains WD40 repeats [Function unknown]
Probab=97.39 E-value=4.8e-05 Score=74.98 Aligned_cols=182 Identities=16% Similarity=0.272 Sum_probs=111.2
Q ss_pred ceEEEEcCCCeEEEEEcCCCcc--eeeecCCCcceeEEEEcCC-CCEEEEEe----CCCcEEEEeCCCCc--eee--ecc
Q 010759 308 VSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPT-GSLLASCS----DDVTAKIWNMKQDK--YVH--DLR 376 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~-~~~l~sgs----~dg~i~iwd~~~~~--~~~--~~~ 376 (502)
..++.+..+|.|-+...+...- -....+|....++++|++- .+.||.|- .|..+.|||+.++- +.. .|.
T Consensus 71 cIlavG~atG~I~l~s~r~~hdSs~E~tp~~ar~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs 150 (783)
T KOG1008|consen 71 CILAVGSATGNISLLSVRHPHDSSAEVTPGYARPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFS 150 (783)
T ss_pred hhhhhccccCceEEeecCCcccccceecccccccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccc
Confidence 3456667778887777654321 2234567778999999884 45566653 35679999988762 111 111
Q ss_pred c-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECC-CCCEEEEEeCCCc
Q 010759 377 E-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSP-TGEYLASGSLDKS 453 (502)
Q Consensus 377 ~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~ 453 (502)
. ......+++|-.+.+ ++.+|.....++++|++.. .....+. +..+..+...| .+.|+++-. ||.
T Consensus 151 ~~~l~gqns~cwlrd~k---------lvlaGm~sr~~~ifdlRqs~~~~~svn--Tk~vqG~tVdp~~~nY~cs~~-dg~ 218 (783)
T KOG1008|consen 151 SSTLDGQNSVCWLRDTK---------LVLAGMTSRSVHIFDLRQSLDSVSSVN--TKYVQGITVDPFSPNYFCSNS-DGD 218 (783)
T ss_pred cccccCccccccccCcc---------hhhcccccchhhhhhhhhhhhhhhhhh--hhhcccceecCCCCCceeccc-cCc
Confidence 1 122233555553332 5778888889999998722 1112221 22455677777 677888766 999
Q ss_pred EEEEeC-CCC-eeEEEEecC-----CCEEEEEECCCCC-EEEEEEC-CCeEEEEEee
Q 010759 454 MHIWSL-KEG-KIVKTYTGN-----GGIFEVCWNKEGD-KIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 454 i~iw~~-~~~-~~~~~~~~~-----~~i~~~~ws~~g~-~la~~~~-~~~v~v~~~~ 501 (502)
|.+||. .+- ..++.+... ..+..++|.|--. .+|++.. .++|+.|+++
T Consensus 219 iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPtrtglla~l~RdS~tIrlydi~ 275 (783)
T KOG1008|consen 219 IAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPTRTGLLAVLSRDSITIRLYDIC 275 (783)
T ss_pred eeeccchhhhccHHHHHhhCCCCcccceeeEEeccCCcchhhhhccCcceEEEeccc
Confidence 999993 332 222222222 2489999999643 5555555 4678888876
No 367
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.39 E-value=0.0049 Score=60.01 Aligned_cols=140 Identities=11% Similarity=0.217 Sum_probs=92.1
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE-------EEEEeCCCcEEEEeCCCCce--eeeccc
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-------LASCSDDVTAKIWNMKQDKY--VHDLRE 377 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-------l~sgs~dg~i~iwd~~~~~~--~~~~~~ 377 (502)
+..+..+.....++-.|+..++.+..+.-|.. |+-+.+.|+.+. -+.|-.|..|.-||.+-... +...+.
T Consensus 346 nlil~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~TlvGLs~n~vfriDpRv~~~~kl~~~q~ 424 (644)
T KOG2395|consen 346 NLILMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTLVGLSDNSVFRIDPRVQGKNKLAVVQS 424 (644)
T ss_pred ceEeeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccEEeecCCceEEecccccCcceeeeeec
Confidence 34455556667788888888888888876665 777778776532 23466678888899873322 111111
Q ss_pred CC----CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 378 HS----KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 378 ~~----~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
|+ ....|++-..+| +++.||.+|.||+||- .+.. ...+.+...+|..|..+.+|++|+..+ +.
T Consensus 425 kqy~~k~nFsc~aTT~sG----------~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc-~t 492 (644)
T KOG2395|consen 425 KQYSTKNNFSCFATTESG----------YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATC-KT 492 (644)
T ss_pred cccccccccceeeecCCc----------eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEec-cc
Confidence 11 122333332333 6899999999999997 4433 334678889999999999999987665 44
Q ss_pred cEEEEeC
Q 010759 453 SMHIWSL 459 (502)
Q Consensus 453 ~i~iw~~ 459 (502)
++.+-++
T Consensus 493 yLlLi~t 499 (644)
T KOG2395|consen 493 YLLLIDT 499 (644)
T ss_pred EEEEEEE
Confidence 5555554
No 368
>COG3391 Uncharacterized conserved protein [Function unknown]
Probab=97.35 E-value=0.19 Score=49.61 Aligned_cols=218 Identities=19% Similarity=0.187 Sum_probs=140.5
Q ss_pred EEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEc--CCCeEEEEEcCCCcceeee
Q 010759 258 FSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSS--TDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 258 ~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--~d~~i~~~~~~~~~~~~~~ 333 (502)
.++..++.+..+ ++...+..|.+.|..+............+ -..+++.....+++-. .++.+.+.+..+.+.+...
T Consensus 77 ~~i~v~~~~~~vyv~~~~~~~v~vid~~~~~~~~~~~vG~~P~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~~ 156 (381)
T COG3391 77 AGVAVNPAGNKVYVTTGDSNTVSVIDTATNTVLGSIPVGLGPVGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTATI 156 (381)
T ss_pred cceeeCCCCCeEEEecCCCCeEEEEcCcccceeeEeeeccCCceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEEE
Confidence 567778888754 45555689999998777766655443322 3344445555666655 4788888888888777664
Q ss_pred cCCCcceeEEEEcCCCCEEEEE-eCCCcEEEEeCCCCceee-e---cccCCCcEEEEEEccCCCCCCCCCCcEEEEE-Ee
Q 010759 334 AGHQGEVNCVKWDPTGSLLASC-SDDVTAKIWNMKQDKYVH-D---LREHSKEIYTIRWSPTGSGTNNPNQQLILAS-AS 407 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sg-s~dg~i~iwd~~~~~~~~-~---~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s-gs 407 (502)
..-..+ ..+++.|+|+.++.+ ..++.|.+.|........ . .......-..+.++|+|.. .+++- ++
T Consensus 157 ~vG~~P-~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~-------~yV~~~~~ 228 (381)
T COG3391 157 PVGNTP-TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNR-------VYVANDGS 228 (381)
T ss_pred ecCCCc-ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCE-------EEEEeccC
Confidence 332334 789999999965544 478899999977655442 1 0111223356778888751 22222 22
Q ss_pred CCCeEEEEeCCCCeEEEE-eeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeeEEEEecC----CCEEEEEECC
Q 010759 408 FDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGKIVKTYTGN----GGIFEVCWNK 481 (502)
Q Consensus 408 ~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~~~~~~~~~----~~i~~~~ws~ 481 (502)
.++.+...|..++..... ...-...-..+.++|+|.++.+.. ..+.+.+-|..+..+....... ..++.+++.+
T Consensus 229 ~~~~v~~id~~~~~v~~~~~~~~~~~~~~v~~~p~g~~~yv~~~~~~~V~vid~~~~~v~~~~~~~~~~~~~~~~~~~~~ 308 (381)
T COG3391 229 GSNNVLKIDTATGNVTATDLPVGSGAPRGVAVDPAGKAAYVANSQGGTVSVIDGATDRVVKTGPTGNEALGEPVSIAISP 308 (381)
T ss_pred CCceEEEEeCCCceEEEeccccccCCCCceeECCCCCEEEEEecCCCeEEEEeCCCCceeeeecccccccccceecccee
Confidence 237899999988877654 221111346689999999888774 4588999999888887765432 2356666666
Q ss_pred CC
Q 010759 482 EG 483 (502)
Q Consensus 482 ~g 483 (502)
..
T Consensus 309 ~~ 310 (381)
T COG3391 309 LY 310 (381)
T ss_pred ec
Confidence 54
No 369
>PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region
Probab=97.27 E-value=0.025 Score=43.79 Aligned_cols=100 Identities=20% Similarity=0.279 Sum_probs=63.5
Q ss_pred eeEEEECC---CC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 157 VCACAWSP---AG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 157 V~~~~~sp---d~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
|+++++.. || +.|+.||.|..||+|+=.. .+..+. ....|++++-... ..|+-|.
T Consensus 2 V~al~~~d~d~dg~~eLlvGs~D~~IRvf~~~e---------------~~~Ei~-----e~~~v~~L~~~~~-~~F~Y~l 60 (111)
T PF14783_consen 2 VTALCLFDFDGDGENELLVGSDDFEIRVFKGDE---------------IVAEIT-----ETDKVTSLCSLGG-GRFAYAL 60 (111)
T ss_pred eeEEEEEecCCCCcceEEEecCCcEEEEEeCCc---------------EEEEEe-----cccceEEEEEcCC-CEEEEEe
Confidence 66777655 43 5899999999999997321 111111 2456788776665 5688899
Q ss_pred CCCcEEEEECCCceeEeecCCCCCEEEEEecC-CC---CEEEEecCCCeEE
Q 010759 233 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KG---DYLLTGSCDKTAI 279 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~-~~---~~l~sgs~D~~v~ 279 (502)
.+|+|-+|+....+- .... +..++++.+.. ++ ..|++|=.+|.|-
T Consensus 61 ~NGTVGvY~~~~RlW-RiKS-K~~~~~~~~~D~~gdG~~eLI~GwsnGkve 109 (111)
T PF14783_consen 61 ANGTVGVYDRSQRLW-RIKS-KNQVTSMAFYDINGDGVPELIVGWSNGKVE 109 (111)
T ss_pred cCCEEEEEeCcceee-eecc-CCCeEEEEEEcCCCCCceEEEEEecCCeEE
Confidence 999999998644332 2322 22355655433 32 2688887787764
No 370
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=97.25 E-value=0.26 Score=49.27 Aligned_cols=242 Identities=16% Similarity=0.241 Sum_probs=122.8
Q ss_pred cceeEEEECCCCCEEEEE-eCC----CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 155 SEVCACAWSPAGSLLASG-SGD----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sg-s~D----~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
..+..+++||+|++||-+ +.. .+|++.|+.++.... ..+... .-..+.|.++++.|+
T Consensus 124 ~~~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~---------d~i~~~---------~~~~~~W~~d~~~~~ 185 (414)
T PF02897_consen 124 VSLGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLP---------DGIENP---------KFSSVSWSDDGKGFF 185 (414)
T ss_dssp EEEEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEE---------EEEEEE---------ESEEEEECTTSSEEE
T ss_pred EEeeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcC---------Cccccc---------ccceEEEeCCCCEEE
Confidence 345578999999987743 333 469999998874210 011110 012389999988877
Q ss_pred EEECCC-----------cEEEEECCCce---eEeecCCCCC--EEEEEecCCCCEEEEecCC----CeEEEEeccCc---
Q 010759 230 TGSYDG-----------QARIWSTNGDL---KCTLSKHKGP--IFSLKWNKKGDYLLTGSCD----KTAIVWDVKTE--- 286 (502)
Q Consensus 230 sg~~dg-----------~i~iw~~~~~~---~~~~~~h~~~--V~~l~~~~~~~~l~sgs~D----~~v~iwd~~~~--- 286 (502)
-...+. .|+.|.+.... ...+...... ...+..++++++|+..+.. ..+.+.++..+
T Consensus 186 y~~~~~~~~~~~~~~~~~v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~ 265 (414)
T PF02897_consen 186 YTRFDEDQRTSDSGYPRQVYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSP 265 (414)
T ss_dssp EEECSTTTSS-CCGCCEEEEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTS
T ss_pred EEEeCcccccccCCCCcEEEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCC
Confidence 665544 36777765432 2344443333 5678899999987643332 34667777664
Q ss_pred --ceeEEeeecccCeEEEecCCCceEEEEc---CCCeEEEEEcCCCcc---eeeecCCCc--ceeEEEEcCCCCEEEEEe
Q 010759 287 --EWKQQFEFHSGPTLDVDWRNNVSFATSS---TDNMIYVCKIGENRP---IKTFAGHQG--EVNCVKWDPTGSLLASCS 356 (502)
Q Consensus 287 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~~~~~~~~~~---~~~~~~h~~--~v~~v~~~p~~~~l~sgs 356 (502)
.+........+....+...++..++.+. ..+.|...++..... ...+..|.. .+..+... .+.+++...
T Consensus 266 ~~~~~~l~~~~~~~~~~v~~~~~~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~Lvl~~~ 344 (414)
T PF02897_consen 266 DAKPKLLSPREDGVEYYVDHHGDRLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSLF-KDYLVLSYR 344 (414)
T ss_dssp S-SEEEEEESSSS-EEEEEEETTEEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEEE-TTEEEEEEE
T ss_pred cCCcEEEeCCCCceEEEEEccCCEEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEEE-CCEEEEEEE
Confidence 3333222222333334444444444442 345666677766543 224445554 34444443 233445555
Q ss_pred CCC--cEEEEeCCCCceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeC--CCeEEEEeCCCCeE
Q 010759 357 DDV--TAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASF--DSTVKLWDVELGKL 422 (502)
Q Consensus 357 ~dg--~i~iwd~~~~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~ 422 (502)
.++ .|+++++..+.....+.. ..+.|..+...+.+. .+++...|. -+++.-||+.+++.
T Consensus 345 ~~~~~~l~v~~~~~~~~~~~~~~p~~g~v~~~~~~~~~~-------~~~~~~ss~~~P~~~y~~d~~t~~~ 408 (414)
T PF02897_consen 345 ENGSSRLRVYDLDDGKESREIPLPEAGSVSGVSGDFDSD-------ELRFSYSSFTTPPTVYRYDLATGEL 408 (414)
T ss_dssp ETTEEEEEEEETT-TEEEEEEESSSSSEEEEEES-TT-S-------EEEEEEEETTEEEEEEEEETTTTCE
T ss_pred ECCccEEEEEECCCCcEEeeecCCcceEEeccCCCCCCC-------EEEEEEeCCCCCCEEEEEECCCCCE
Confidence 555 477888873333322222 223344443333322 233333333 24567777777654
No 371
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=97.22 E-value=0.0014 Score=56.96 Aligned_cols=106 Identities=17% Similarity=0.252 Sum_probs=71.6
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 349 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 349 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
+..+++|+.+|.|.+|.+........+.........+- -|.+.. ..+.++++.||.||.|++.-.+.+-....
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~-Ip~~~~------~~~~c~~~~dg~ir~~n~~p~k~~g~~g~ 142 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLG-IPNGRD------SSLGCVGAQDGRIRACNIKPNKVLGYVGQ 142 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceec-cccccc------cceeEEeccCCceeeeccccCceeeeecc
Confidence 45688999999999998763222111111111111111 133321 13778899999999999998888887777
Q ss_pred CC-CCEEEEEECCCCCEEEEE--eCCCcEEEEeCCC
Q 010759 429 HR-EPVYSLAFSPTGEYLASG--SLDKSMHIWSLKE 461 (502)
Q Consensus 429 h~-~~v~~l~~spdg~~lasg--s~Dg~i~iw~~~~ 461 (502)
|. .++..+..+..+.+|+++ |.|..++.|++..
T Consensus 143 h~~~~~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~ 178 (238)
T KOG2444|consen 143 HNFESGEELIVVGSDEFLKIADTSHDRVLKKWNVEK 178 (238)
T ss_pred ccCCCcceeEEecCCceEEeeccccchhhhhcchhh
Confidence 87 677777777777888888 8888888888764
No 372
>PF06977 SdiA-regulated: SdiA-regulated; InterPro: IPR009722 This entry represents a conserved region approximately 100 residues long within a number of hypothetical bacterial proteins that may be regulated by SdiA, a member of the LuxR family of transcriptional regulators []. Some proteins contain the IPR001258 from INTERPRO repeat.; PDB: 3QQZ_A.
Probab=97.22 E-value=0.063 Score=48.96 Aligned_cols=195 Identities=14% Similarity=0.181 Sum_probs=104.8
Q ss_pred eccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 149 ILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.+.+-...+.+++|+|+.. +++.....+.|...+.. |.. ++...- ...+..-.+++..++.+
T Consensus 16 ~l~g~~~e~SGLTy~pd~~tLfaV~d~~~~i~els~~-G~v-------------lr~i~l---~g~~D~EgI~y~g~~~~ 78 (248)
T PF06977_consen 16 PLPGILDELSGLTYNPDTGTLFAVQDEPGEIYELSLD-GKV-------------LRRIPL---DGFGDYEGITYLGNGRY 78 (248)
T ss_dssp E-TT--S-EEEEEEETTTTEEEEEETTTTEEEEEETT---E-------------EEEEE----SS-SSEEEEEE-STTEE
T ss_pred ECCCccCCccccEEcCCCCeEEEEECCCCEEEEEcCC-CCE-------------EEEEeC---CCCCCceeEEEECCCEE
Confidence 3445566799999999855 55556677777777653 221 122111 11356788899888888
Q ss_pred EEEEECCCcEEEEECCC--c---e--eE--e--ec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC---cceeEEe
Q 010759 228 LATGSYDGQARIWSTNG--D---L--KC--T--LS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---EEWKQQF 292 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~--~---~--~~--~--~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~---~~~~~~~ 292 (502)
+++--.++.+.++.... . . .. . +. .++..+-+|+|.|.++.|+.+-...-..+|.++. .......
T Consensus 79 vl~~Er~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~N~G~EGla~D~~~~~L~v~kE~~P~~l~~~~~~~~~~~~~~~ 158 (248)
T PF06977_consen 79 VLSEERDQRLYIFTIDDDTTSLDRADVQKISLGFPNKGNKGFEGLAYDPKTNRLFVAKERKPKRLYEVNGFPGGFDLFVS 158 (248)
T ss_dssp EEEETTTTEEEEEEE----TT--EEEEEEEE---S---SS--EEEEEETTTTEEEEEEESSSEEEEEEESTT-SS--EEE
T ss_pred EEEEcCCCcEEEEEEeccccccchhhceEEecccccCCCcceEEEEEcCCCCEEEEEeCCCChhhEEEccccCccceeec
Confidence 88776788898887621 1 0 11 1 11 3455689999999999888887766666776543 1111111
Q ss_pred e--------ecccCeEE--EecCCCceEEEEcCCCeEEEEEcCCCcceeeec--C-CC------cceeEEEEcCCCCEEE
Q 010759 293 E--------FHSGPTLD--VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA--G-HQ------GEVNCVKWDPTGSLLA 353 (502)
Q Consensus 293 ~--------~~~~~~~~--~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~--~-h~------~~v~~v~~~p~~~~l~ 353 (502)
. .....+.+ ++...+..++.+.....+..++. .++++..+. . .. ...-.|+|.++|++.+
T Consensus 159 ~~~~~~~~~~~~~d~S~l~~~p~t~~lliLS~es~~l~~~d~-~G~~~~~~~L~~g~~gl~~~~~QpEGIa~d~~G~LYI 237 (248)
T PF06977_consen 159 DDQDLDDDKLFVRDLSGLSYDPRTGHLLILSDESRLLLELDR-QGRVVSSLSLDRGFHGLSKDIPQPEGIAFDPDGNLYI 237 (248)
T ss_dssp E-HHHH-HT--SS---EEEEETTTTEEEEEETTTTEEEEE-T-T--EEEEEE-STTGGG-SS---SEEEEEE-TT--EEE
T ss_pred cccccccccceeccccceEEcCCCCeEEEEECCCCeEEEECC-CCCEEEEEEeCCcccCcccccCCccEEEECCCCCEEE
Confidence 0 01111223 33445567788888888888884 445544332 1 11 2467899999997766
Q ss_pred EEeCCCcEE
Q 010759 354 SCSDDVTAK 362 (502)
Q Consensus 354 sgs~dg~i~ 362 (502)
++ +-+...
T Consensus 238 vs-EpNlfy 245 (248)
T PF06977_consen 238 VS-EPNLFY 245 (248)
T ss_dssp EE-TTTEEE
T ss_pred Ec-CCceEE
Confidence 54 444333
No 373
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=97.20 E-value=0.42 Score=50.68 Aligned_cols=322 Identities=13% Similarity=0.168 Sum_probs=164.6
Q ss_pred ccceeEEEECCCC---C---EEEEEeCCCcEEEEec-CCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 154 TSEVCACAWSPAG---S---LLASGSGDSTARIWTI-ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 154 ~~~V~~~~~spd~---~---~l~sgs~D~~i~iW~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...|.|+.++|-| + ++|.|..+..+.+--. .+.... ......+ ......|...+|-.|..
T Consensus 530 e~evaCLDisp~~d~~~~s~~~aVG~Ws~~~~~l~~~pd~~~~-----------~~~~l~~--~~iPRSIl~~~~e~d~~ 596 (1096)
T KOG1897|consen 530 EYEVACLDISPLGDAPNKSRLLAVGLWSDISMILTFLPDLILI-----------THEQLSG--EIIPRSILLTTFEGDIH 596 (1096)
T ss_pred cceeEEEecccCCCCCCcceEEEEEeecceEEEEEECCCccee-----------eeeccCC--CccchheeeEEeeccce
Confidence 3679999999852 2 7888887665554332 221110 1111111 11234577778888899
Q ss_pred EEEEEECCCcEEEEECC--CceeEee---cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 227 LLATGSYDGQARIWSTN--GDLKCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~--~~~~~~~---~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
+|+++..||.+..+... ....... .--+.|+.--.|+..+..-+-+.+|+-..+|--+..-+...+... .+..
T Consensus 597 yLlvalgdG~l~~fv~d~~tg~lsd~Kk~~lGt~P~~Lr~f~sk~~t~vfa~sdrP~viY~~n~kLv~spls~k--ev~~ 674 (1096)
T KOG1897|consen 597 YLLVALGDGALLYFVLDINTGQLSDRKKVTLGTQPISLRTFSSKSRTAVFALSDRPTVIYSSNGKLVYSPLSLK--EVNH 674 (1096)
T ss_pred EEEEEcCCceEEEEEEEcccceEccccccccCCCCcEEEEEeeCCceEEEEeCCCCEEEEecCCcEEEeccchH--Hhhh
Confidence 99999999999877543 2211111 112345555566655544444445666566643322111111110 0111
Q ss_pred E-ecCCC--ceEEEEcCCCeEEEEEcCCCc--ceeeecCCCcceeEEEEcCCCCEEEEEeCC--------------CcEE
Q 010759 302 V-DWRNN--VSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDD--------------VTAK 362 (502)
Q Consensus 302 ~-~~~~~--~~~~~~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d--------------g~i~ 362 (502)
+ .|.++ ...+.....+.+.+..++.-+ .+++..- ......+++.+...++++.+.- ..++
T Consensus 675 ~c~f~s~a~~d~l~~~~~~~l~i~tid~iqkl~irtvpl-~~~prrI~~q~~sl~~~v~s~r~e~~~~~~~ee~~~s~l~ 753 (1096)
T KOG1897|consen 675 MCPFNSDAYPDSLASANGGALTIGTIDEIQKLHIRTVPL-GESPRRICYQESSLTFGVLSNRIESSAEYYGEEYEVSFLR 753 (1096)
T ss_pred hcccccccCCceEEEecCCceEEEEecchhhcceeeecC-CCChhheEecccceEEEEEecccccchhhcCCcceEEEEE
Confidence 1 11111 112223334445554443321 1222211 2234456666544444443321 1356
Q ss_pred EEeCCCCceeeecccC-CC---cEEEEEEccCCCCCCCCCCcEEEEEEeC----------CCeEEEEeCCCCeEEEEeeC
Q 010759 363 IWNMKQDKYVHDLREH-SK---EIYTIRWSPTGSGTNNPNQQLILASASF----------DSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~-~~---~i~~~~~sp~g~~~~~~~~~~~l~sgs~----------dg~i~iwd~~~~~~~~~~~~ 428 (502)
++|-++-..++..... .. .+.++.|..+.. .+++.|.. .|.|.++....++.+..+..
T Consensus 754 vlD~nTf~vl~~hef~~~E~~~Si~s~~~~~d~~--------t~~vVGT~~v~Pde~ep~~GRIivfe~~e~~~L~~v~e 825 (1096)
T KOG1897|consen 754 VLDQNTFEVLSSHEFERNETALSIISCKFTDDPN--------TYYVVGTGLVYPDENEPVNGRIIVFEFEELNSLELVAE 825 (1096)
T ss_pred EecCCceeEEeeccccccceeeeeeeeeecCCCc--------eEEEEEEEeeccCCCCcccceEEEEEEecCCceeeeee
Confidence 6776665544322211 11 233334543321 23444431 46677776655333322221
Q ss_pred --CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ecCCCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010759 429 --HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 429 --h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
-.+.++++.- -+|++||. -...|++|++.+++.++.- .....++.+.....|+.+|+|..=+++.+.-+|+
T Consensus 826 ~~v~Gav~aL~~-fngkllA~--In~~vrLye~t~~~eLr~e~~~~~~~~aL~l~v~gdeI~VgDlm~Sitll~y~~ 899 (1096)
T KOG1897|consen 826 TVVKGAVYALVE-FNGKLLAG--INQSVRLYEWTTERELRIECNISNPIIALDLQVKGDEIAVGDLMRSITLLQYKG 899 (1096)
T ss_pred eeeccceeehhh-hCCeEEEe--cCcEEEEEEccccceehhhhcccCCeEEEEEEecCcEEEEeeccceEEEEEEec
Confidence 2456666643 25777764 5568999999888655443 2345688999999999999999888888876653
No 374
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.18 E-value=0.02 Score=60.58 Aligned_cols=76 Identities=24% Similarity=0.430 Sum_probs=60.3
Q ss_pred CCEEEEEECCCcEEEEECCCceeE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 225 GTLLATGSYDGQARIWSTNGDLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+..++.|+..|.+...|..+.+.. .-..-.++|++++|+.+|..++.|-.+|.|.+||+..++..+.+..+..|..
T Consensus 99 ~~~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t 176 (1206)
T KOG2079|consen 99 VVPIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVT 176 (1206)
T ss_pred eeeEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccc
Confidence 456788888888888887665442 2223467999999999999999999999999999999888887777666543
No 375
>KOG2395 consensus Protein involved in vacuole import and degradation [Intracellular trafficking, secretion, and vesicular transport]
Probab=97.06 E-value=0.018 Score=56.32 Aligned_cols=143 Identities=18% Similarity=0.218 Sum_probs=94.6
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeCC
Q 010759 352 LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNGH 429 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h 429 (502)
+.++..-..++--|+..|+.+.+...+.. |.-+.+.|+.........+.+ .|-.|..|.=||.+... .+....+|
T Consensus 349 l~~~~~~~~l~klDIE~GKIVeEWk~~~d-i~mv~~t~d~K~~Ql~~e~Tl--vGLs~n~vfriDpRv~~~~kl~~~q~k 425 (644)
T KOG2395|consen 349 LMDGGEQDKLYKLDIERGKIVEEWKFEDD-INMVDITPDFKFAQLTSEQTL--VGLSDNSVFRIDPRVQGKNKLAVVQSK 425 (644)
T ss_pred eeCCCCcCcceeeecccceeeeEeeccCC-cceeeccCCcchhcccccccE--EeecCCceEEecccccCcceeeeeecc
Confidence 44555556788889999999988887765 777778888765433333333 36678889999987432 22222333
Q ss_pred C----CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-EecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 430 R----EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-YTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 430 ~----~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
. ....|.+-..+| +||.||.+|-|++||. .+..-++ +++- .+|..+.-+.+|++|.+.+. ..+.+.+.
T Consensus 426 qy~~k~nFsc~aTT~sG-~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVdvtadGKwil~Tc~-tyLlLi~t 499 (644)
T KOG2395|consen 426 QYSTKNNFSCFATTESG-YIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVDVTADGKWILATCK-TYLLLIDT 499 (644)
T ss_pred ccccccccceeeecCCc-eEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEEeeccCcEEEEecc-cEEEEEEE
Confidence 2 234555554444 8999999999999997 4444333 4553 46999999999997765543 35555554
No 376
>PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus
Probab=96.90 E-value=0.12 Score=50.63 Aligned_cols=46 Identities=20% Similarity=0.314 Sum_probs=37.9
Q ss_pred eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC
Q 010759 426 LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 426 ~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
+......+.+|+.+|++++.|+...=|+|.++|+.++.+++.+.+-
T Consensus 303 l~D~~R~~~~i~~sP~~~laA~tDslGRV~LiD~~~~~vvrmWKGY 348 (415)
T PF14655_consen 303 LPDSKREGESICLSPSGRLAAVTDSLGRVLLIDVARGIVVRMWKGY 348 (415)
T ss_pred eccCCceEEEEEECCCCCEEEEEcCCCcEEEEECCCChhhhhhccC
Confidence 4444556899999999998888766699999999999998888763
No 377
>PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A ....
Probab=96.85 E-value=0.6 Score=46.68 Aligned_cols=231 Identities=16% Similarity=0.185 Sum_probs=117.6
Q ss_pred EEEEecCCCCEEEEe-cCC----CeEEEEeccCcceeEEeeecccCeEEEecCCC-ceE-EEEcC----------CCeEE
Q 010759 258 FSLKWNKKGDYLLTG-SCD----KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSF-ATSST----------DNMIY 320 (502)
Q Consensus 258 ~~l~~~~~~~~l~sg-s~D----~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~----------d~~i~ 320 (502)
...+++|++++++-+ +.. .+++++|+.+++.+......... ..+.|.++ ..| .+... ...|+
T Consensus 127 ~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~-~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~v~ 205 (414)
T PF02897_consen 127 GGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF-SSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQVY 205 (414)
T ss_dssp EEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES-EEEEECTTSSEEEEEECSTTTSS-CCGCCEEEE
T ss_pred eeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc-ceEEEeCCCCEEEEEEeCcccccccCCCCcEEE
Confidence 457789999987643 333 45999999999765432111111 12778654 333 33322 33478
Q ss_pred EEEcCCCcc--eeeecCCCcc--eeEEEEcCCCCEEEEEeCC----CcEEEEeCCCC----ceeeecccCC-CcEEEEEE
Q 010759 321 VCKIGENRP--IKTFAGHQGE--VNCVKWDPTGSLLASCSDD----VTAKIWNMKQD----KYVHDLREHS-KEIYTIRW 387 (502)
Q Consensus 321 ~~~~~~~~~--~~~~~~h~~~--v~~v~~~p~~~~l~sgs~d----g~i~iwd~~~~----~~~~~~~~~~-~~i~~~~~ 387 (502)
.+.+++... ...|.+.... ...+..++|+++|+..+.. ..+.+.++..+ .....+.... +..+.+..
T Consensus 206 ~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v~~ 285 (414)
T PF02897_consen 206 RHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYVDH 285 (414)
T ss_dssp EEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEEEE
T ss_pred EEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEEEc
Confidence 888877643 2455554433 5678899999987654432 24666677654 1222222222 22233333
Q ss_pred ccCCCCCCCCCCcEEEEEE--eCCCeEEEEeCCCCeE---EEEeeCCCCC--EEEEEECCCCCEEE-EEeCCC--cEEEE
Q 010759 388 SPTGSGTNNPNQQLILASA--SFDSTVKLWDVELGKL---LYSLNGHREP--VYSLAFSPTGEYLA-SGSLDK--SMHIW 457 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sg--s~dg~i~iwd~~~~~~---~~~~~~h~~~--v~~l~~spdg~~la-sgs~Dg--~i~iw 457 (502)
. .+ .+++.|- ...+.|.-.++..... ...+..+... +..+.. .+.+|+ +.-.++ .|+++
T Consensus 286 ~-~~--------~~yi~Tn~~a~~~~l~~~~l~~~~~~~~~~~l~~~~~~~~l~~~~~--~~~~Lvl~~~~~~~~~l~v~ 354 (414)
T PF02897_consen 286 H-GD--------RLYILTNDDAPNGRLVAVDLADPSPAEWWTVLIPEDEDVSLEDVSL--FKDYLVLSYRENGSSRLRVY 354 (414)
T ss_dssp E-TT--------EEEEEE-TT-TT-EEEEEETTSTSGGGEEEEEE--SSSEEEEEEEE--ETTEEEEEEEETTEEEEEEE
T ss_pred c-CC--------EEEEeeCCCCCCcEEEEecccccccccceeEEcCCCCceeEEEEEE--ECCEEEEEEEECCccEEEEE
Confidence 2 21 2344442 2345566666665541 2244445543 444443 455555 444444 68899
Q ss_pred eCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEEECC----CeEEEEEe
Q 010759 458 SLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAACFAN----HTVCVLDF 500 (502)
Q Consensus 458 ~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~~----~~v~v~~~ 500 (502)
++..+....... ..+.|..+...++++.+.....+ .+++.||+
T Consensus 355 ~~~~~~~~~~~~~p~~g~v~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~ 403 (414)
T PF02897_consen 355 DLDDGKESREIPLPEAGSVSGVSGDFDSDELRFSYSSFTTPPTVYRYDL 403 (414)
T ss_dssp ETT-TEEEEEEESSSSSEEEEEES-TT-SEEEEEEEETTEEEEEEEEET
T ss_pred ECCCCcEEeeecCCcceEEeccCCCCCCCEEEEEEeCCCCCCEEEEEEC
Confidence 988344443333 34456777777777755544332 34555554
No 378
>PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase. These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity
Probab=96.83 E-value=0.43 Score=44.66 Aligned_cols=225 Identities=15% Similarity=0.206 Sum_probs=114.9
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC
Q 010759 165 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 244 (502)
Q Consensus 165 d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~ 244 (502)
.++.|+.|..+| +.++++..... +. .. .+...|..+...++-+.|++-+ |+.++++++..
T Consensus 6 ~~~~L~vGt~~G-l~~~~~~~~~~-------~~------~i-----~~~~~I~ql~vl~~~~~llvLs-d~~l~~~~L~~ 65 (275)
T PF00780_consen 6 WGDRLLVGTEDG-LYVYDLSDPSK-------PT------RI-----LKLSSITQLSVLPELNLLLVLS-DGQLYVYDLDS 65 (275)
T ss_pred CCCEEEEEECCC-EEEEEecCCcc-------ce------eE-----eecceEEEEEEecccCEEEEEc-CCccEEEEchh
Confidence 578899999988 88888722110 00 00 0123388888888777666554 59999998643
Q ss_pred ceeEe---------------ecCCCCCEEEEE--ecCCCCEEEEecCCCeEEEEeccCc-----ceeEEeeecccCeEEE
Q 010759 245 DLKCT---------------LSKHKGPIFSLK--WNKKGDYLLTGSCDKTAIVWDVKTE-----EWKQQFEFHSGPTLDV 302 (502)
Q Consensus 245 ~~~~~---------------~~~h~~~V~~l~--~~~~~~~l~sgs~D~~v~iwd~~~~-----~~~~~~~~~~~~~~~~ 302 (502)
-.... .......+...+ -.+.+...+.....++|.+|..... ...+.+... ..+..+
T Consensus 66 l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va~kk~i~i~~~~~~~~~f~~~~ke~~lp-~~~~~i 144 (275)
T PF00780_consen 66 LEPVSTSAPLAFPKSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVAVKKKILIYEWNDPRNSFSKLLKEISLP-DPPSSI 144 (275)
T ss_pred hccccccccccccccccccccccccCCeeEEeeccccccceEEEEEECCEEEEEEEECCcccccceeEEEEcC-CCcEEE
Confidence 11111 111222344333 1234445555556679988877552 233333332 556677
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCC------------CcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGH------------QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h------------~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~ 370 (502)
.|..+..++.. .+...+.++.+..+...+... ..++..+... ++.+|++- |..-.+-|. .|.
T Consensus 145 ~~~~~~i~v~~--~~~f~~idl~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~~e~Ll~~--~~~g~fv~~-~G~ 218 (275)
T PF00780_consen 145 AFLGNKICVGT--SKGFYLIDLNTGSPSELLDPSDSSSSFKSRNSSSKPLGIFQLS-DNEFLLCY--DNIGVFVNK-NGE 218 (275)
T ss_pred EEeCCEEEEEe--CCceEEEecCCCCceEEeCccCCcchhhhcccCCCceEEEEeC-CceEEEEe--cceEEEEcC-CCC
Confidence 77755444433 333556676654443322111 1223333333 45555533 222222233 333
Q ss_pred eee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC
Q 010759 371 YVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH 429 (502)
Q Consensus 371 ~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 429 (502)
..+ .+.- ......+++.. . +|+..+ ++.|.||++.++++++++...
T Consensus 219 ~~r~~~i~W-~~~p~~~~~~~----------p-yli~~~-~~~iEV~~~~~~~lvQ~i~~~ 266 (275)
T PF00780_consen 219 PSRKSTIQW-SSAPQSVAYSS----------P-YLIAFS-SNSIEVRSLETGELVQTIPLP 266 (275)
T ss_pred cCcccEEEc-CCchhEEEEEC----------C-EEEEEC-CCEEEEEECcCCcEEEEEECC
Confidence 222 1111 11223333321 1 444443 466999999999999888743
No 379
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=96.73 E-value=0.22 Score=45.97 Aligned_cols=144 Identities=16% Similarity=0.210 Sum_probs=84.1
Q ss_pred ceeEEEEcCCCCEEEEEe--C-CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 339 EVNCVKWDPTGSLLASCS--D-DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs--~-dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
.+.++++++++..+|... . ...+.++.. +.....+. ....+....|++++. +.+....+...+++
T Consensus 25 ~~~s~AvS~dg~~~A~v~~~~~~~~L~~~~~--~~~~~~~~-~g~~l~~PS~d~~g~---------~W~v~~~~~~~~~~ 92 (253)
T PF10647_consen 25 DVTSPAVSPDGSRVAAVSEGDGGRSLYVGPA--GGPVRPVL-TGGSLTRPSWDPDGW---------VWTVDDGSGGVRVV 92 (253)
T ss_pred cccceEECCCCCeEEEEEEcCCCCEEEEEcC--CCcceeec-cCCccccccccCCCC---------EEEEEcCCCceEEE
Confidence 678899999999877665 2 234455443 33222221 223566677888764 44444455566666
Q ss_pred e-CCCCeEE-EEe--eCCCCCEEEEEECCCCCEEEEEe---CCCcEEEEeCC---CC--eeE----EEEec-CCCEEEEE
Q 010759 416 D-VELGKLL-YSL--NGHREPVYSLAFSPTGEYLASGS---LDKSMHIWSLK---EG--KIV----KTYTG-NGGIFEVC 478 (502)
Q Consensus 416 d-~~~~~~~-~~~--~~h~~~v~~l~~spdg~~lasgs---~Dg~i~iw~~~---~~--~~~----~~~~~-~~~i~~~~ 478 (502)
. ...+... ..+ ..-...|+.+.+||||..+|.-. .++.|.+=-+. .+ ..+ ..... ...+.+++
T Consensus 93 ~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V~r~~~g~~~~l~~~~~~~~~~~~~v~~v~ 172 (253)
T PF10647_consen 93 RDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGVVRDGDGVPRRLTGPRRVAPPLLSDVTDVA 172 (253)
T ss_pred EecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEEEeCCCCCcceeccceEecccccCcceeee
Confidence 3 3333221 112 11122899999999998776544 35677776543 23 111 11111 34688999
Q ss_pred ECCCCCEEEEEECCCe
Q 010759 479 WNKEGDKIAACFANHT 494 (502)
Q Consensus 479 ws~~g~~la~~~~~~~ 494 (502)
|.+++.+++.+...+.
T Consensus 173 W~~~~~L~V~~~~~~~ 188 (253)
T PF10647_consen 173 WSDDSTLVVLGRSAGG 188 (253)
T ss_pred ecCCCEEEEEeCCCCC
Confidence 9999998888766554
No 380
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=96.66 E-value=0.38 Score=49.96 Aligned_cols=222 Identities=15% Similarity=0.267 Sum_probs=110.9
Q ss_pred CCCEEEEEECCC------cEEEEECCCceeEeecC--CCCCEEEEEecCCCCEEEEecCC------CeEEEEeccCccee
Q 010759 224 EGTLLATGSYDG------QARIWSTNGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCD------KTAIVWDVKTEEWK 289 (502)
Q Consensus 224 ~~~~l~sg~~dg------~i~iw~~~~~~~~~~~~--h~~~V~~l~~~~~~~~l~sgs~D------~~v~iwd~~~~~~~ 289 (502)
.+.+++.||..+ .+..+|.....-..+.. +.....+++.. .+...++|+.| .++..||..+.+|.
T Consensus 284 ~~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~-~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~ 362 (571)
T KOG4441|consen 284 SGKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVL-NGKLYVVGGYDSGSDRLSSVERYDPRTNQWT 362 (571)
T ss_pred CCeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEE-CCEEEEEccccCCCcccceEEEecCCCCcee
Confidence 455667777663 56677765442221111 12223344444 34667788888 46789999998887
Q ss_pred EEeeeccc-CeEEEecCCCceEEEEcCCCe-----EEEEEcCCCc--ceeeecCCCcceeEEEEcCCCCEEEEEeCCC--
Q 010759 290 QQFEFHSG-PTLDVDWRNNVSFATSSTDNM-----IYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-- 359 (502)
Q Consensus 290 ~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~-----i~~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-- 359 (502)
..-..... .-..+...++..++.++.|+. +-.||..+++ .+..+.......-.+ .-+|.+.++||.++
T Consensus 363 ~~a~M~~~R~~~~v~~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~~r~~~gv~--~~~g~iYi~GG~~~~~ 440 (571)
T KOG4441|consen 363 PVAPMNTKRSDFGVAVLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLTRRSGHGVA--VLGGKLYIIGGGDGSS 440 (571)
T ss_pred ccCCccCccccceeEEECCEEEEEeccccccccccEEEecCCCCcccccCCCCcceeeeEEE--EECCEEEEEcCcCCCc
Confidence 63322211 112333446667788877754 4444444332 111111111111112 23688888888665
Q ss_pred ----cEEEEeCCCCcee--eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe-----EEEEeCCCCeEEE--Ee
Q 010759 360 ----TAKIWNMKQDKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST-----VKLWDVELGKLLY--SL 426 (502)
Q Consensus 360 ----~i~iwd~~~~~~~--~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~-----i~iwd~~~~~~~~--~~ 426 (502)
++..||..++... ..+....... .++. -++ .+.+.|+.|+. |..||..+.+-.. .+
T Consensus 441 ~~l~sve~YDP~t~~W~~~~~M~~~R~~~-g~a~-~~~---------~iYvvGG~~~~~~~~~VE~ydp~~~~W~~v~~m 509 (571)
T KOG4441|consen 441 NCLNSVECYDPETNTWTLIAPMNTRRSGF-GVAV-LNG---------KIYVVGGFDGTSALSSVERYDPETNQWTMVAPM 509 (571)
T ss_pred cccceEEEEcCCCCceeecCCcccccccc-eEEE-ECC---------EEEEECCccCCCccceEEEEcCCCCceeEcccC
Confidence 4567887665442 2221111111 1111 111 25566776663 6778877554322 22
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEeCCC
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSLDK-----SMHIWSLKE 461 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~Dg-----~i~iw~~~~ 461 (502)
......+-.+.+ ++...|.||.|| +|..||..+
T Consensus 510 ~~~rs~~g~~~~--~~~ly~vGG~~~~~~l~~ve~ydp~~ 547 (571)
T KOG4441|consen 510 TSPRSAVGVVVL--GGKLYAVGGFDGNNNLNTVECYDPET 547 (571)
T ss_pred ccccccccEEEE--CCEEEEEecccCccccceeEEcCCCC
Confidence 222333333333 466778888775 455665544
No 381
>PHA02713 hypothetical protein; Provisional
Probab=96.64 E-value=0.33 Score=50.45 Aligned_cols=184 Identities=3% Similarity=0.077 Sum_probs=90.1
Q ss_pred CCCEEEEecCC------CeEEEEeccCcceeEEeeeccc-CeEEEecCCCceEEEEcCCC-----eEEEEEcCCCc--ce
Q 010759 265 KGDYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSSTDN-----MIYVCKIGENR--PI 330 (502)
Q Consensus 265 ~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~-----~i~~~~~~~~~--~~ 330 (502)
++..++.|+.+ .++..||+.+..|...-..... .-..+...++..++.|+.++ .+..|+..++. .+
T Consensus 303 ~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~~~~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~ 382 (557)
T PHA02713 303 DNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLAVIDDTIYAIGGQNGTNVERTIECYTMGDDKWKML 382 (557)
T ss_pred CCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEEEECCEEEEECCcCCCCCCceEEEEECCCCeEEEC
Confidence 45566667653 3578899988877543221111 01122233455666666543 36667655432 11
Q ss_pred eeecCCCcceeEEEEcCCCCEEEEEeCCC-----------------------cEEEEeCCCCcee--eecccCCCcEEEE
Q 010759 331 KTFAGHQGEVNCVKWDPTGSLLASCSDDV-----------------------TAKIWNMKQDKYV--HDLREHSKEIYTI 385 (502)
Q Consensus 331 ~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-----------------------~i~iwd~~~~~~~--~~~~~~~~~i~~~ 385 (502)
..+.........+. -+|.+.+.||.++ .+..||..+.+.. ..+.........+
T Consensus 383 ~~mp~~r~~~~~~~--~~g~IYviGG~~~~~~~~~~~~~~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~ 460 (557)
T PHA02713 383 PDMPIALSSYGMCV--LDQYIYIIGGRTEHIDYTSVHHMNSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVV 460 (557)
T ss_pred CCCCcccccccEEE--ECCEEEEEeCCCcccccccccccccccccccccccceEEEECCCCCeEeecCCCCcccccCcEE
Confidence 11111111111222 2677778887653 3566776655432 1111100000011
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCC------CeEEEEeCCC-C--eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC--cE
Q 010759 386 RWSPTGSGTNNPNQQLILASASFD------STVKLWDVEL-G--KLLYSLNGHREPVYSLAFSPTGEYLASGSLDK--SM 454 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~d------g~i~iwd~~~-~--~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg--~i 454 (502)
. -+ +..+++ |+.+ ..+..||..+ . ..+..+.........+++ +|+..++||.|| ++
T Consensus 461 ~--~~--------~~IYv~-GG~~~~~~~~~~ve~Ydp~~~~~W~~~~~m~~~r~~~~~~~~--~~~iyv~Gg~~~~~~~ 527 (557)
T PHA02713 461 S--HK--------DDIYVV-CDIKDEKNVKTCIFRYNTNTYNGWELITTTESRLSALHTILH--DNTIMMLHCYESYMLQ 527 (557)
T ss_pred E--EC--------CEEEEE-eCCCCCCccceeEEEecCCCCCCeeEccccCcccccceeEEE--CCEEEEEeeecceeeh
Confidence 1 11 223444 5443 2467788876 3 333444433333344444 678889999988 77
Q ss_pred EEEeCCCCe
Q 010759 455 HIWSLKEGK 463 (502)
Q Consensus 455 ~iw~~~~~~ 463 (502)
..||..+.+
T Consensus 528 e~yd~~~~~ 536 (557)
T PHA02713 528 DTFNVYTYE 536 (557)
T ss_pred hhcCccccc
Confidence 778777654
No 382
>KOG2079 consensus Vacuolar assembly/sorting protein VPS8 [Intracellular trafficking, secretion, and vesicular transport]
Probab=96.64 E-value=0.0072 Score=63.74 Aligned_cols=93 Identities=23% Similarity=0.298 Sum_probs=71.3
Q ss_pred EEEEEeCCCeEEEEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC----CCEEE
Q 010759 402 ILASASFDSTVKLWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN----GGIFE 476 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~----~~i~~ 476 (502)
.++.|+.-|.|-..|+... .....-....++|++++|+.+|+.++.|=.+|.|.+||...++.++.+..+ .++..
T Consensus 101 ~ivi~Ts~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~vi~ 180 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGVIF 180 (1206)
T ss_pred eEEEEcCchhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceEEE
Confidence 4777888888888887642 111222224579999999999999999999999999999999988887543 35777
Q ss_pred EEECCCCCEEEEEECCCe
Q 010759 477 VCWNKEGDKIAACFANHT 494 (502)
Q Consensus 477 ~~ws~~g~~la~~~~~~~ 494 (502)
+-|..++..+.++...|.
T Consensus 181 v~~t~~nS~llt~D~~Gs 198 (1206)
T KOG2079|consen 181 VGRTSQNSKLLTSDTGGS 198 (1206)
T ss_pred EEEeCCCcEEEEccCCCc
Confidence 888888887777776665
No 383
>PRK13616 lipoprotein LpqB; Provisional
Probab=96.61 E-value=0.23 Score=51.61 Aligned_cols=182 Identities=13% Similarity=0.210 Sum_probs=93.4
Q ss_pred cceeEEEECCCCCEEEEEe------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 155 SEVCACAWSPAGSLLASGS------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
..+...++||+|+.+|... .|+.-.||-...+... ..+ .. ....+.-.|+|+|..+
T Consensus 350 ~~vsspaiSpdG~~vA~v~~~~~~~~d~~s~Lwv~~~gg~~----------~~l--t~------g~~~t~PsWspDG~~l 411 (591)
T PRK13616 350 GNITSAALSRSGRQVAAVVTLGRGAPDPASSLWVGPLGGVA----------VQV--LE------GHSLTRPSWSLDADAV 411 (591)
T ss_pred cCcccceECCCCCEEEEEEeecCCCCCcceEEEEEeCCCcc----------eee--ec------CCCCCCceECCCCCce
Confidence 3578899999998776554 3555556643221100 000 00 1126677899998877
Q ss_pred EEEECC-CcEEEEE-----------CCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEE---EeccCcceeE---
Q 010759 229 ATGSYD-GQARIWS-----------TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV---WDVKTEEWKQ--- 290 (502)
Q Consensus 229 ~sg~~d-g~i~iw~-----------~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~i---wd~~~~~~~~--- 290 (502)
.+.... ..+++.+ +.+..... ...+.|..+.|+|+|.+++.-. ++.|.+ -....+...-
T Consensus 412 w~v~dg~~~~~v~~~~~~gql~~~~vd~ge~~~--~~~g~Issl~wSpDG~RiA~i~-~g~v~Va~Vvr~~~G~~~l~~~ 488 (591)
T PRK13616 412 WVVVDGNTVVRVIRDPATGQLARTPVDASAVAS--RVPGPISELQLSRDGVRAAMII-GGKVYLAVVEQTEDGQYALTNP 488 (591)
T ss_pred EEEecCcceEEEeccCCCceEEEEeccCchhhh--ccCCCcCeEEECCCCCEEEEEE-CCEEEEEEEEeCCCCceeeccc
Confidence 776432 2233332 22211111 3356799999999999877654 467766 3333343111
Q ss_pred -Eeeecc-cCeEEEecCCCceEEEEcCCC--eEEEEEcCCCcceeeecC--CCcceeEEEEcCCCCEEEEEeCCCc
Q 010759 291 -QFEFHS-GPTLDVDWRNNVSFATSSTDN--MIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVT 360 (502)
Q Consensus 291 -~~~~~~-~~~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~sgs~dg~ 360 (502)
.+.... ..+.++.|..+..++....+. .++...+...... .+.+ ....+..|+-++. .++....+|.
T Consensus 489 ~~l~~~l~~~~~~l~W~~~~~L~V~~~~~~~~v~~v~vDG~~~~-~~~~~n~~~~v~~vaa~~~--~iyv~~~~g~ 561 (591)
T PRK13616 489 REVGPGLGDTAVSLDWRTGDSLVVGRSDPEHPVWYVNLDGSNSD-ALPSRNLSAPVVAVAASPS--TVYVTDARAV 561 (591)
T ss_pred EEeecccCCccccceEecCCEEEEEecCCCCceEEEecCCcccc-ccCCCCccCceEEEecCCc--eEEEEcCCce
Confidence 122222 234678898776666554333 3444444332211 1122 2345666665552 3444444553
No 384
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=96.52 E-value=0.18 Score=50.38 Aligned_cols=148 Identities=18% Similarity=0.370 Sum_probs=88.6
Q ss_pred cceeEEEEcCCCCEEEEEe---CCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEE
Q 010759 338 GEVNCVKWDPTGSLLASCS---DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKL 414 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs---~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~i 414 (502)
.++..++|. ||+.++-.. .+|.+++=|. +.+ +.-..|+.+.|+|-+.... ..+| +-.+...|.+
T Consensus 20 HPvhGlaWT-DGkqVvLT~L~l~~gE~kfGds---~vi----GqFEhV~GlsW~P~~~~~~----paLL-AVQHkkhVtV 86 (671)
T PF15390_consen 20 HPVHGLAWT-DGKQVVLTDLQLHNGEPKFGDS---KVI----GQFEHVHGLSWAPPCTADT----PALL-AVQHKKHVTV 86 (671)
T ss_pred ccccceEec-CCCEEEEEeeeeeCCccccCCc---cEe----eccceeeeeeecCcccCCC----CceE-EEeccceEEE
Confidence 467889997 776654332 2333333221 112 2234689999999865321 1244 4567789999
Q ss_pred EeCC-----CCeEEEEeeCC-C--CCE--EEEEECCCCCEEEEEeCCCcEEEEeCCC-C-eeEEEEecCCCEEEEEECCC
Q 010759 415 WDVE-----LGKLLYSLNGH-R--EPV--YSLAFSPTGEYLASGSLDKSMHIWSLKE-G-KIVKTYTGNGGIFEVCWNKE 482 (502)
Q Consensus 415 wd~~-----~~~~~~~~~~h-~--~~v--~~l~~spdg~~lasgs~Dg~i~iw~~~~-~-~~~~~~~~~~~i~~~~ws~~ 482 (502)
|-+. ..+.+..-..+ . -+| ..+.|+|....|+.-.....-.+++++. . .+..-+.+.+-|.+.||.+|
T Consensus 87 WqL~~s~~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~sV~~d~srVkaDi~~~G~IhCACWT~D 166 (671)
T PF15390_consen 87 WQLCPSTTERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLPSVHCDSSRVKADIKTSGLIHCACWTKD 166 (671)
T ss_pred EEeccCccccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEeeeeeeCCceEEEeccCCceEEEEEecCc
Confidence 9874 23333322211 1 122 3467999998887765554445566543 2 33334566777999999999
Q ss_pred CCEEEEEECCCeE--EEEE
Q 010759 483 GDKIAACFANHTV--CVLD 499 (502)
Q Consensus 483 g~~la~~~~~~~v--~v~~ 499 (502)
|++|+.+-.+ .+ +|||
T Consensus 167 G~RLVVAvGS-sLHSyiWd 184 (671)
T PF15390_consen 167 GQRLVVAVGS-SLHSYIWD 184 (671)
T ss_pred CCEEEEEeCC-eEEEEEec
Confidence 9999988665 44 5564
No 385
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.48 E-value=0.0099 Score=38.38 Aligned_cols=34 Identities=21% Similarity=0.352 Sum_probs=29.9
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 430 REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 430 ~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
...|..++|+|...+||.|+.+|.|.+|.+ +++.
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 356999999999999999999999999998 4543
No 386
>PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit. CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A ....
Probab=96.36 E-value=1 Score=43.22 Aligned_cols=139 Identities=11% Similarity=0.102 Sum_probs=84.3
Q ss_pred CCEEEEEEC---------C-CcEEEEECCCc-----eeEe--ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 225 GTLLATGSY---------D-GQARIWSTNGD-----LKCT--LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 225 ~~~l~sg~~---------d-g~i~iw~~~~~-----~~~~--~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
..+++.|.. . |.|.+++.... .... -....++|++++-- +.+|+.+. .+.|.+|++...+
T Consensus 42 ~~~ivVGT~~~~~~~~~~~~Gri~v~~i~~~~~~~~~l~~i~~~~~~g~V~ai~~~--~~~lv~~~-g~~l~v~~l~~~~ 118 (321)
T PF03178_consen 42 KEYIVVGTAFNYGEDPEPSSGRILVFEISESPENNFKLKLIHSTEVKGPVTAICSF--NGRLVVAV-GNKLYVYDLDNSK 118 (321)
T ss_dssp SEEEEEEEEE--TTSSS-S-EEEEEEEECSS-----EEEEEEEEEESS-EEEEEEE--TTEEEEEE-TTEEEEEEEETTS
T ss_pred cCEEEEEecccccccccccCcEEEEEEEEcccccceEEEEEEEEeecCcceEhhhh--CCEEEEee-cCEEEEEEccCcc
Confidence 467777644 2 88999987652 2211 23457899999765 33444443 4899999998887
Q ss_pred -eeEEeeecc-cCeEEEecCCCceEEEEcCCCeEEEEEcCC-CcceeeecC--CCcceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 288 -WKQQFEFHS-GPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 288 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~--h~~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
+...-..+. ..+.++....+ .++.+.....+.++.+.. ...+..+.. ....+.++.|-+++..++.+..+|.+.
T Consensus 119 ~l~~~~~~~~~~~i~sl~~~~~-~I~vgD~~~sv~~~~~~~~~~~l~~va~d~~~~~v~~~~~l~d~~~~i~~D~~gnl~ 197 (321)
T PF03178_consen 119 TLLKKAFYDSPFYITSLSVFKN-YILVGDAMKSVSLLRYDEENNKLILVARDYQPRWVTAAEFLVDEDTIIVGDKDGNLF 197 (321)
T ss_dssp SEEEEEEE-BSSSEEEEEEETT-EEEEEESSSSEEEEEEETTTE-EEEEEEESS-BEEEEEEEE-SSSEEEEEETTSEEE
T ss_pred cchhhheecceEEEEEEecccc-EEEEEEcccCEEEEEEEccCCEEEEEEecCCCccEEEEEEecCCcEEEEEcCCCeEE
Confidence 554443322 34556655555 455565556666665443 222322222 234578888886777999999999999
Q ss_pred EEeCC
Q 010759 363 IWNMK 367 (502)
Q Consensus 363 iwd~~ 367 (502)
++...
T Consensus 198 ~l~~~ 202 (321)
T PF03178_consen 198 VLRYN 202 (321)
T ss_dssp EEEE-
T ss_pred EEEEC
Confidence 98765
No 387
>PHA02713 hypothetical protein; Provisional
Probab=96.36 E-value=0.35 Score=50.29 Aligned_cols=208 Identities=9% Similarity=0.058 Sum_probs=95.8
Q ss_pred eEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCC------CeEEEEEcCCCcc--eeeecCCCcceeEEEEcC
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD------NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDP 347 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p 347 (502)
.+..||+.+.+|...-...... -.++...++..++.|+.+ ..+..++...+.- +..+.........+ .-
T Consensus 273 ~v~~yd~~~~~W~~l~~mp~~r~~~~~a~l~~~IYviGG~~~~~~~~~~v~~Yd~~~n~W~~~~~m~~~R~~~~~~--~~ 350 (557)
T PHA02713 273 CILVYNINTMEYSVISTIPNHIINYASAIVDNEIIIAGGYNFNNPSLNKVYKINIENKIHVELPPMIKNRCRFSLA--VI 350 (557)
T ss_pred CEEEEeCCCCeEEECCCCCccccceEEEEECCEEEEEcCCCCCCCccceEEEEECCCCeEeeCCCCcchhhceeEE--EE
Confidence 5677888887765422111110 112222355556666542 2456666554421 11111111111122 23
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----------
Q 010759 348 TGSLLASCSDDV-----TAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD----------- 409 (502)
Q Consensus 348 ~~~~l~sgs~dg-----~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d----------- 409 (502)
+|++.+.||.++ .+..||..+..... .+.........+.. ++ . +.+.|+.+
T Consensus 351 ~g~IYviGG~~~~~~~~sve~Ydp~~~~W~~~~~mp~~r~~~~~~~~--~g--------~-IYviGG~~~~~~~~~~~~~ 419 (557)
T PHA02713 351 DDTIYAIGGQNGTNVERTIECYTMGDDKWKMLPDMPIALSSYGMCVL--DQ--------Y-IYIIGGRTEHIDYTSVHHM 419 (557)
T ss_pred CCEEEEECCcCCCCCCceEEEEECCCCeEEECCCCCcccccccEEEE--CC--------E-EEEEeCCCccccccccccc
Confidence 678888888764 37788877654322 22111111111111 22 2 33445443
Q ss_pred ------------CeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeCC------CcEEEEeCCC-Ce--eEE
Q 010759 410 ------------STVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSLD------KSMHIWSLKE-GK--IVK 466 (502)
Q Consensus 410 ------------g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~D------g~i~iw~~~~-~~--~~~ 466 (502)
..+..||..+.+= +..+.........++ -+|+..+.||.+ ..|..||..+ .+ .+.
T Consensus 420 ~~~~~~~~~~~~~~ve~YDP~td~W~~v~~m~~~r~~~~~~~--~~~~IYv~GG~~~~~~~~~~ve~Ydp~~~~~W~~~~ 497 (557)
T PHA02713 420 NSIDMEEDTHSSNKVIRYDTVNNIWETLPNFWTGTIRPGVVS--HKDDIYVVCDIKDEKNVKTCIFRYNTNTYNGWELIT 497 (557)
T ss_pred ccccccccccccceEEEECCCCCeEeecCCCCcccccCcEEE--ECCEEEEEeCCCCCCccceeEEEecCCCCCCeeEcc
Confidence 2466777765432 222211111111122 246667777764 2467898876 33 233
Q ss_pred EEecCC-CEEEEEECCCCCEEEEEECCC--eEEEEEee
Q 010759 467 TYTGNG-GIFEVCWNKEGDKIAACFANH--TVCVLDFR 501 (502)
Q Consensus 467 ~~~~~~-~i~~~~ws~~g~~la~~~~~~--~v~v~~~~ 501 (502)
.++..- ....++ -+|+..++|+.++ ++..||..
T Consensus 498 ~m~~~r~~~~~~~--~~~~iyv~Gg~~~~~~~e~yd~~ 533 (557)
T PHA02713 498 TTESRLSALHTIL--HDNTIMMLHCYESYMLQDTFNVY 533 (557)
T ss_pred ccCcccccceeEE--ECCEEEEEeeecceeehhhcCcc
Confidence 222211 111122 2778888888887 66666653
No 388
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=96.31 E-value=1 Score=42.51 Aligned_cols=268 Identities=15% Similarity=0.201 Sum_probs=118.2
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEe---ecCC---CCCEEEEEecCCCCEEEEecCCCeEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCT---LSKH---KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~---~~~h---~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~ 286 (502)
..++.+|+|..+..-+++|. .+.| +-..++..... .... .-...+|.|... ..+++| ..+.|.. ....+
T Consensus 16 ~~~l~dV~F~d~~~G~~VG~-~g~i-l~T~DGG~tW~~~~~~~~~~~~~~l~~I~f~~~-~g~ivG-~~g~ll~-T~DgG 90 (302)
T PF14870_consen 16 DKPLLDVAFVDPNHGWAVGA-YGTI-LKTTDGGKTWQPVSLDLDNPFDYHLNSISFDGN-EGWIVG-EPGLLLH-TTDGG 90 (302)
T ss_dssp SS-EEEEEESSSS-EEEEET-TTEE-EEESSTTSS-EE-----S-----EEEEEEEETT-EEEEEE-ETTEEEE-ESSTT
T ss_pred CCceEEEEEecCCEEEEEec-CCEE-EEECCCCccccccccCCCccceeeEEEEEecCC-ceEEEc-CCceEEE-ecCCC
Confidence 45789999996666666654 4543 22333322111 1111 112566777543 344444 4454333 22333
Q ss_pred c-eeEEeee--cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 287 E-WKQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 287 ~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
+ |...... -.+....+...........+..+.|+.-.-....=.....+-.+.+..+..+++|+++++++.-....-
T Consensus 91 ~tW~~v~l~~~lpgs~~~i~~l~~~~~~l~~~~G~iy~T~DgG~tW~~~~~~~~gs~~~~~r~~dG~~vavs~~G~~~~s 170 (302)
T PF14870_consen 91 KTWERVPLSSKLPGSPFGITALGDGSAELAGDRGAIYRTTDGGKTWQAVVSETSGSINDITRSSDGRYVAVSSRGNFYSS 170 (302)
T ss_dssp SS-EE----TT-SS-EEEEEEEETTEEEEEETT--EEEESSTTSSEEEEE-S----EEEEEE-TTS-EEEEETTSSEEEE
T ss_pred CCcEEeecCCCCCCCeeEEEEcCCCcEEEEcCCCcEEEeCCCCCCeeEcccCCcceeEeEEECCCCcEEEEECcccEEEE
Confidence 2 3222100 111222222222223333334444443221111101122334467888888999999988876666677
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEE----eeCCCCCEEEEEE
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYS----LNGHREPVYSLAF 438 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~----~~~h~~~v~~l~~ 438 (502)
|+--.......-+.....|..+.|.|++. +.+ ....|.|++=+.. ....-.. +..-.-.+.+++|
T Consensus 171 ~~~G~~~w~~~~r~~~~riq~~gf~~~~~---------lw~-~~~Gg~~~~s~~~~~~~~w~~~~~~~~~~~~~~ld~a~ 240 (302)
T PF14870_consen 171 WDPGQTTWQPHNRNSSRRIQSMGFSPDGN---------LWM-LARGGQIQFSDDPDDGETWSEPIIPIKTNGYGILDLAY 240 (302)
T ss_dssp E-TT-SS-EEEE--SSS-EEEEEE-TTS----------EEE-EETTTEEEEEE-TTEEEEE---B-TTSS--S-EEEEEE
T ss_pred ecCCCccceEEccCccceehhceecCCCC---------EEE-EeCCcEEEEccCCCCccccccccCCcccCceeeEEEEe
Confidence 87543323333344567899999999875 323 3478888887722 2222111 1112234899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec----CCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG----NGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~----~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
.+++...|+|+.. . .+.....|+-=+.... ...++.+.|.++.+-+|.| .+|.|--|
T Consensus 241 ~~~~~~wa~gg~G-~-l~~S~DgGktW~~~~~~~~~~~n~~~i~f~~~~~gf~lG-~~G~ll~~ 301 (302)
T PF14870_consen 241 RPPNEIWAVGGSG-T-LLVSTDGGKTWQKDRVGENVPSNLYRIVFVNPDKGFVLG-QDGVLLRY 301 (302)
T ss_dssp SSSS-EEEEESTT---EEEESSTTSS-EE-GGGTTSSS---EEEEEETTEEEEE--STTEEEEE
T ss_pred cCCCCEEEEeCCc-c-EEEeCCCCccceECccccCCCCceEEEEEcCCCceEEEC-CCcEEEEe
Confidence 9998888876644 3 3344455543222211 3458899998775555554 56665433
No 389
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=96.30 E-value=0.85 Score=41.61 Aligned_cols=179 Identities=14% Similarity=0.143 Sum_probs=108.6
Q ss_pred EEEEEecCCCCEEEEecCCC--eEEEEeccCcceeEEeeecccCe-EEEecCCCceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 257 IFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~D~--~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
.-++.|..++..+-|.+.-| .|+.+|+.+++..........-. -.+...++..+...=.++..+++|..+-+++..|
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~~~l~~~~FgEGit~~~d~l~qLTWk~~~~f~yd~~tl~~~~~~ 126 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQSVPLPPRYFGEGITILGDKLYQLTWKEGTGFVYDPNTLKKIGTF 126 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEEEE-TTT--EEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEEEECCccccceeEEEECCEEEEEEecCCeEEEEccccceEEEEE
Confidence 35677867777777777766 69999999998776554432211 1233345555666667778889999888877776
Q ss_pred cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC--C---CcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH--S---KEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~--~---~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
.- .+.=..++ .+++.|+.......++++|..+.+....+... . ..+.-+.|. +| .+.|-.=.
T Consensus 127 ~y-~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i-~G---------~IyANVW~ 193 (264)
T PF05096_consen 127 PY-PGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYI-NG---------KIYANVWQ 193 (264)
T ss_dssp E--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEE-TT---------EEEEEETT
T ss_pred ec-CCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEE-cC---------EEEEEeCC
Confidence 52 34556666 46666666666778999998776665544322 1 223445553 33 24444445
Q ss_pred CCeEEEEeCCCCeEEEEeeC------------C---CCCEEEEEECCCCC-EEEEE
Q 010759 409 DSTVKLWDVELGKLLYSLNG------------H---REPVYSLAFSPTGE-YLASG 448 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~~------------h---~~~v~~l~~spdg~-~lasg 448 (502)
...|...|..+|+++..+.- + ....+.|||.|... +++||
T Consensus 194 td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 194 TDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp SSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred CCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 66778889999998876521 1 24579999988765 45555
No 390
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=96.27 E-value=1.4 Score=47.21 Aligned_cols=202 Identities=15% Similarity=0.231 Sum_probs=109.7
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEEeeecccCe--------EEEec-----------------CCCceEEEEcCCCeEE
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT--------LDVDW-----------------RNNVSFATSSTDNMIY 320 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~--------~~~~~-----------------~~~~~~~~~~~d~~i~ 320 (502)
+..++.++.++.|.-.|..+++.+-.+....... ..+.+ ....+++.++.|+.++
T Consensus 194 gg~lYv~t~~~~V~ALDa~TGk~lW~~d~~~~~~~~~~~~~cRGvay~~~p~~~~~~~~~~~p~~~~~rV~~~T~Dg~Li 273 (764)
T TIGR03074 194 GDTLYLCTPHNKVIALDAATGKEKWKFDPKLKTEAGRQHQTCRGVSYYDAPAAAAGPAAPAAPADCARRIILPTSDARLI 273 (764)
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCcccccccccccceEEecCCcccccccccccccccCCEEEEecCCCeEE
Confidence 4567777778888888888887665554322110 00111 1123566677899999
Q ss_pred EEEcCCCcceeeecCCCccee-------------EEEEcC--CCCEEEEEeC----------CCcEEEEeCCCCceeeec
Q 010759 321 VCKIGENRPIKTFAGHQGEVN-------------CVKWDP--TGSLLASCSD----------DVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 321 ~~~~~~~~~~~~~~~h~~~v~-------------~v~~~p--~~~~l~sgs~----------dg~i~iwd~~~~~~~~~~ 375 (502)
-.|..+++.+-.|. ..+.|. .+.-.| .+..++.|+. +|.|+-+|.++++.+-.+
T Consensus 274 ALDA~TGk~~W~fg-~~G~vdl~~~~g~~~~g~~~~ts~P~V~~g~VIvG~~v~d~~~~~~~~G~I~A~Da~TGkl~W~~ 352 (764)
T TIGR03074 274 ALDADTGKLCEDFG-NNGTVDLTAGMGTTPPGYYYPTSPPLVAGTTVVIGGRVADNYSTDEPSGVIRAFDVNTGALVWAW 352 (764)
T ss_pred EEECCCCCEEEEec-CCCceeeecccCcCCCcccccccCCEEECCEEEEEecccccccccCCCcEEEEEECCCCcEeeEE
Confidence 99998888776553 222110 011112 1334555542 688999999999887544
Q ss_pred ccC---------CCcEEE-----------------EEEccCCCCCCCC-CCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 376 REH---------SKEIYT-----------------IRWSPTGSGTNNP-NQQLILASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 376 ~~~---------~~~i~~-----------------~~~sp~g~~~~~~-~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
..- .+..+. +.+-|.|...... .........-..+.|.-.|.++|+..+.+..
T Consensus 353 ~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slvALD~~TGk~~W~~Q~ 432 (764)
T TIGR03074 353 DPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLVALDATTGKERWVFQT 432 (764)
T ss_pred ecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEEEEeCCCCceEEEecc
Confidence 311 011110 1111111110000 0000000012345677789999999887754
Q ss_pred CCCCEEE---------EEECC-CCC---EEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 429 HREPVYS---------LAFSP-TGE---YLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 429 h~~~v~~---------l~~sp-dg~---~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
....+++ +.+.- +|+ .++.++.+|.++++|.++|+.+...
T Consensus 433 ~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~tG~~l~~~ 485 (764)
T TIGR03074 433 VHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRRTGEPIVPV 485 (764)
T ss_pred cCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECCCCCEEeec
Confidence 1111111 12222 563 7889999999999999999987653
No 391
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=96.26 E-value=0.31 Score=47.85 Aligned_cols=143 Identities=17% Similarity=0.176 Sum_probs=77.2
Q ss_pred ceeEEEEcCCCCEEEEEe-----------CCC-cEEEEeCCC--Cce--eeecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 339 EVNCVKWDPTGSLLASCS-----------DDV-TAKIWNMKQ--DKY--VHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs-----------~dg-~i~iwd~~~--~~~--~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
....|+|.++|+++++-. ..+ .|.+++-.. ++. ...+.........+++.+++ +
T Consensus 15 ~P~~ia~d~~G~l~V~e~~~y~~~~~~~~~~~~rI~~l~d~dgdG~~d~~~vfa~~l~~p~Gi~~~~~G----------l 84 (367)
T TIGR02604 15 NPIAVCFDERGRLWVAEGITYSRPAGRQGPLGDRILILEDADGDGKYDKSNVFAEELSMVTGLAVAVGG----------V 84 (367)
T ss_pred CCceeeECCCCCEEEEeCCcCCCCCCCCCCCCCEEEEEEcCCCCCCcceeEEeecCCCCccceeEecCC----------E
Confidence 345788888888877653 223 666665432 221 12222222334666776665 2
Q ss_pred EEEEeCCCeEEEEeCCC-------CeEEEE-eeC----CCCCEEEEEECCCCCEEEEEeCC-------------------
Q 010759 403 LASASFDSTVKLWDVEL-------GKLLYS-LNG----HREPVYSLAFSPTGEYLASGSLD------------------- 451 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~-------~~~~~~-~~~----h~~~v~~l~~spdg~~lasgs~D------------------- 451 (502)
+++ +.....++.|... .+.+.. +.. +....+.++|.|||.+.++-+..
T Consensus 85 yV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~LYv~~G~~~~~~~~~~~~~~~~~~~~~ 163 (367)
T TIGR02604 85 YVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGWLYFNHGNTLASKVTRPGTSDESRQGLG 163 (367)
T ss_pred EEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCCEEEecccCCCceeccCCCccCcccccC
Confidence 333 3333333445431 122222 322 13447889999999877654421
Q ss_pred CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 452 KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
|.|.-++..+++......+....+.++|+|+|+++++-..+
T Consensus 164 g~i~r~~pdg~~~e~~a~G~rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 164 GGLFRYNPDGGKLRVVAHGFQNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred ceEEEEecCCCeEEEEecCcCCCccceECCCCCEEEEccCC
Confidence 44566666555543322334446899999999987764433
No 392
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=96.18 E-value=0.002 Score=66.38 Aligned_cols=124 Identities=12% Similarity=0.160 Sum_probs=71.5
Q ss_pred eeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC---C
Q 010759 148 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN---G 223 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s---~ 223 (502)
..++|-.++|-.++|-. +...++ -.-|.+.+|++.- ..+..+. .+.++ ....+ ..++.-+.|. +
T Consensus 126 ~l~kgf~G~v~dl~fah~~~pk~~--~~vg~lfVy~vd~--l~G~iq~----~l~v~-~~~p~---gs~~~~V~wcp~~~ 193 (1283)
T KOG1916|consen 126 ELAKGFPGGVGDLQFAHTKCPKGR--RLVGELFVYDVDV--LQGEIQP----QLEVT-PITPY---GSDPQLVSWCPIAV 193 (1283)
T ss_pred HHHhcCCCCcccccccccCChHHH--HHhhhhheeehHh--hcccccc----ceEEe-ecCcC---CCCcceeeeccccc
Confidence 46778888998888843 222222 2236688998753 1111111 11111 11111 2223444444 4
Q ss_pred CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEE-----------ecCCCCEEEEecCCCeEEEEec
Q 010759 224 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLK-----------WNKKGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~-----------~~~~~~~l~sgs~D~~v~iwd~ 283 (502)
+.-++..+-.++.|++...+......+.+|...++.++ .+|||..|+.++.||.+++|.+
T Consensus 194 ~~~~ic~~~~~~~i~lL~~~ra~~~l~rsHs~~~~d~a~~~~g~~~l~~lSpDGtv~a~a~~dG~v~f~Qi 264 (1283)
T KOG1916|consen 194 NKVYICYGLKGGEIRLLNINRALRSLFRSHSQRVTDMAFFAEGVLKLASLSPDGTVFAWAISDGSVGFYQI 264 (1283)
T ss_pred ccceeeeccCCCceeEeeechHHHHHHHhcCCCcccHHHHhhchhhheeeCCCCcEEEEeecCCccceeee
Confidence 66777778888899887765444444556765554443 4788888888888888888864
No 393
>PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain
Probab=96.16 E-value=0.023 Score=36.68 Aligned_cols=30 Identities=27% Similarity=0.595 Sum_probs=27.7
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEec
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTI 183 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~ 183 (502)
...|.+++|+|...+||.|+.||.|.++.+
T Consensus 11 ~~~v~~~~w~P~mdLiA~~t~~g~v~v~Rl 40 (47)
T PF12894_consen 11 PSRVSCMSWCPTMDLIALGTEDGEVLVYRL 40 (47)
T ss_pred CCcEEEEEECCCCCEEEEEECCCeEEEEEC
Confidence 346999999999999999999999999987
No 394
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=95.92 E-value=0.26 Score=50.89 Aligned_cols=92 Identities=20% Similarity=0.380 Sum_probs=63.9
Q ss_pred EeCCCeEEEEeCCCCeEEEEee-CCCCCEEEEEEC--CCCCEEEEEeCCCcEEEEeCCC---------CeeEEEEe----
Q 010759 406 ASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFS--PTGEYLASGSLDKSMHIWSLKE---------GKIVKTYT---- 469 (502)
Q Consensus 406 gs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~s--pdg~~lasgs~Dg~i~iw~~~~---------~~~~~~~~---- 469 (502)
-+....+.|||.+.+..-++-. ...+.|.++.|. |+|+.+.+.|....|.+|.-.. ...++.+.
T Consensus 47 ~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~ 126 (631)
T PF12234_consen 47 DSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSH 126 (631)
T ss_pred ECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecC
Confidence 3344579999999887655433 346789999885 7899999999999999996421 12233321
Q ss_pred cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 470 GNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 470 ~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
....|.+.+|-++|..+++++ | .++|++
T Consensus 127 T~h~Igds~Wl~~G~LvV~sG-N-qlfv~d 154 (631)
T PF12234_consen 127 TPHPIGDSIWLKDGTLVVGSG-N-QLFVFD 154 (631)
T ss_pred CCCCccceeEecCCeEEEEeC-C-EEEEEC
Confidence 134688999999996665553 3 577764
No 395
>PRK13684 Ycf48-like protein; Provisional
Probab=95.82 E-value=1.9 Score=41.57 Aligned_cols=148 Identities=15% Similarity=0.198 Sum_probs=80.4
Q ss_pred CcceeEEEEcCCCCEEEEEeCCCcEE-EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 337 QGEVNCVKWDPTGSLLASCSDDVTAK-IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 337 ~~~v~~v~~~p~~~~l~sgs~dg~i~-iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
.+.+.++.+.|++.+++++. .|.+. .++-...............++.+.+.|++. +++. +..|.+++=
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~-~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~---------~~~v-g~~G~~~~~ 240 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSS-RGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGN---------LWML-ARGGQIRFN 240 (334)
T ss_pred cceEEEEEECCCCeEEEEeC-CceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCC---------EEEE-ecCCEEEEc
Confidence 45688899999987776554 45443 222211112221223345778888888775 3343 356766542
Q ss_pred eCCCCeEEEEeeC----CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe---c-CCCEEEEEECCCCCEEE
Q 010759 416 DVELGKLLYSLNG----HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT---G-NGGIFEVCWNKEGDKIA 487 (502)
Q Consensus 416 d~~~~~~~~~~~~----h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~---~-~~~i~~~~ws~~g~~la 487 (502)
....+..-..... -...+.++.|.|++..+++| .+|.|. .....|+.-.... . ....+.+.|..+++.+|
T Consensus 241 s~d~G~sW~~~~~~~~~~~~~l~~v~~~~~~~~~~~G-~~G~v~-~S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (334)
T PRK13684 241 DPDDLESWSKPIIPEITNGYGYLDLAYRTPGEIWAGG-GNGTLL-VSKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV 318 (334)
T ss_pred cCCCCCccccccCCccccccceeeEEEcCCCCEEEEc-CCCeEE-EeCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE
Confidence 2333332111111 12357889999988866554 566554 4444444322221 1 12478888887777766
Q ss_pred EEECCCeEEEE
Q 010759 488 ACFANHTVCVL 498 (502)
Q Consensus 488 ~~~~~~~v~v~ 498 (502)
+| ..|.|..+
T Consensus 319 ~G-~~G~il~~ 328 (334)
T PRK13684 319 LG-QRGVLLRY 328 (334)
T ss_pred EC-CCceEEEe
Confidence 54 45666554
No 396
>KOG4441 consensus Proteins containing BTB/POZ and Kelch domains, involved in regulatory/signal transduction processes [Signal transduction mechanisms; General function prediction only]
Probab=95.80 E-value=0.99 Score=46.95 Aligned_cols=182 Identities=15% Similarity=0.189 Sum_probs=93.2
Q ss_pred CCEEEEecCC------CeEEEEeccCcceeEEeeeccc-CeEEEecCCCceEEEEcCC-C-----eEEEEEcCCCcc--e
Q 010759 266 GDYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSSTD-N-----MIYVCKIGENRP--I 330 (502)
Q Consensus 266 ~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d-~-----~i~~~~~~~~~~--~ 330 (502)
+..++.|+.+ ..+..+|+.++.|......... ...++...++..+++|+.+ + .+..+|...++= +
T Consensus 285 ~~l~~vGG~~~~~~~~~~ve~yd~~~~~w~~~a~m~~~r~~~~~~~~~~~lYv~GG~~~~~~~l~~ve~YD~~~~~W~~~ 364 (571)
T KOG4441|consen 285 GKLVAVGGYNRQGQSLRSVECYDPKTNEWSSLAPMPSPRCRVGVAVLNGKLYVVGGYDSGSDRLSSVERYDPRTNQWTPV 364 (571)
T ss_pred CeEEEECCCCCCCcccceeEEecCCcCcEeecCCCCcccccccEEEECCEEEEEccccCCCcccceEEEecCCCCceecc
Confidence 3455566665 4688999988877654332221 2234445566778888877 2 455565544331 1
Q ss_pred eeecCCCcceeEEEEcCCCCEEEEEeCCCc-----EEEEeCCCCcee--eecccCCCcEEEEEEc-cCCCCCCCCCCcEE
Q 010759 331 KTFAGHQGEVNCVKWDPTGSLLASCSDDVT-----AKIWNMKQDKYV--HDLREHSKEIYTIRWS-PTGSGTNNPNQQLI 402 (502)
Q Consensus 331 ~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~-----i~iwd~~~~~~~--~~~~~~~~~i~~~~~s-p~g~~~~~~~~~~~ 402 (502)
..+.......-.. .-+|.+.|.||.||. +..||..+.+.- ..+.. .....+.. -.| .+
T Consensus 365 a~M~~~R~~~~v~--~l~g~iYavGG~dg~~~l~svE~YDp~~~~W~~va~m~~---~r~~~gv~~~~g---------~i 430 (571)
T KOG4441|consen 365 APMNTKRSDFGVA--VLDGKLYAVGGFDGEKSLNSVECYDPVTNKWTPVAPMLT---RRSGHGVAVLGG---------KL 430 (571)
T ss_pred CCccCccccceeE--EECCEEEEEeccccccccccEEEecCCCCcccccCCCCc---ceeeeEEEEECC---------EE
Confidence 1111111111111 126888999999974 677887665432 21211 11111111 122 24
Q ss_pred EEEEeCCC------eEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeCCCc-----EEEEeCCCCe
Q 010759 403 LASASFDS------TVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSLDKS-----MHIWSLKEGK 463 (502)
Q Consensus 403 l~sgs~dg------~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~-----i~iw~~~~~~ 463 (502)
.+.|+.++ ++..||..+.+- +..+..-+....... -++...|.||.|+. |..||..+.+
T Consensus 431 Yi~GG~~~~~~~l~sve~YDP~t~~W~~~~~M~~~R~~~g~a~--~~~~iYvvGG~~~~~~~~~VE~ydp~~~~ 502 (571)
T KOG4441|consen 431 YIIGGGDGSSNCLNSVECYDPETNTWTLIAPMNTRRSGFGVAV--LNGKIYVVGGFDGTSALSSVERYDPETNQ 502 (571)
T ss_pred EEEcCcCCCccccceEEEEcCCCCceeecCCcccccccceEEE--ECCEEEEECCccCCCccceEEEEcCCCCc
Confidence 45565443 466777765542 222221111222222 25677888888763 7778877654
No 397
>PF05096 Glu_cyclase_2: Glutamine cyclotransferase; InterPro: IPR007788 This family of enzymes 2.3.2.5 from EC catalyse the cyclization of free L-glutamine and N-terminal glutaminyl residues in proteins to pyroglutamate (5-oxoproline) and pyroglutamyl residues respectively []. This family includes plant and bacterial enzymes and seems unrelated to the mammalian enzymes.; PDB: 3NOK_B 2FAW_A 2IWA_A 3NOM_A 3NOL_A 3MBR_X.
Probab=95.45 E-value=2 Score=39.25 Aligned_cols=179 Identities=13% Similarity=0.111 Sum_probs=99.9
Q ss_pred eeEEEECCCCCEEEEEeCCC--cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 157 VCACAWSPAGSLLASGSGDS--TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~--~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
...+.|..+|.++-|.|.-| .|+.+|+.+++.... ..+....- =-.++... +++..-.-.+
T Consensus 47 TQGL~~~~~g~LyESTG~yG~S~l~~~d~~tg~~~~~-----------~~l~~~~F-----gEGit~~~-d~l~qLTWk~ 109 (264)
T PF05096_consen 47 TQGLEFLDDGTLYESTGLYGQSSLRKVDLETGKVLQS-----------VPLPPRYF-----GEGITILG-DKLYQLTWKE 109 (264)
T ss_dssp EEEEEEEETTEEEEEECSTTEEEEEEEETTTSSEEEE-----------EE-TTT-------EEEEEEET-TEEEEEESSS
T ss_pred CccEEecCCCEEEEeCCCCCcEEEEEEECCCCcEEEE-----------EECCcccc-----ceeEEEEC-CEEEEEEecC
Confidence 34678877888888888665 799999988753211 11111100 01122222 2333344567
Q ss_pred CcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc--c---CeEEEecCCCc
Q 010759 235 GQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS--G---PTLDVDWRNNV 308 (502)
Q Consensus 235 g~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~--~---~~~~~~~~~~~ 308 (502)
+.+.+||...- ...++. ..+.=++|+ .+++.|+.......+.++|+.+.+....+.... . ..+.+.|.+..
T Consensus 110 ~~~f~yd~~tl~~~~~~~-y~~EGWGLt--~dg~~Li~SDGS~~L~~~dP~~f~~~~~i~V~~~g~pv~~LNELE~i~G~ 186 (264)
T PF05096_consen 110 GTGFVYDPNTLKKIGTFP-YPGEGWGLT--SDGKRLIMSDGSSRLYFLDPETFKEVRTIQVTDNGRPVSNLNELEYINGK 186 (264)
T ss_dssp SEEEEEETTTTEEEEEEE--SSS--EEE--ECSSCEEEE-SSSEEEEE-TTT-SEEEEEE-EETTEE---EEEEEEETTE
T ss_pred CeEEEEccccceEEEEEe-cCCcceEEE--cCCCEEEEECCccceEEECCcccceEEEEEEEECCEECCCcEeEEEEcCE
Confidence 88899998653 333332 335568887 456677777667789999998887766554322 1 23455666666
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeec------------CC---CcceeEEEEcCCCCE-EEEE
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFA------------GH---QGEVNCVKWDPTGSL-LASC 355 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~------------~h---~~~v~~v~~~p~~~~-l~sg 355 (502)
.++-.=....|...|..+++.+..+. .+ ..-.+.|+|.|.... ++||
T Consensus 187 IyANVW~td~I~~Idp~tG~V~~~iDls~L~~~~~~~~~~~~~~dVLNGIAyd~~~~~l~vTG 249 (264)
T PF05096_consen 187 IYANVWQTDRIVRIDPETGKVVGWIDLSGLRPEVGRDKSRQPDDDVLNGIAYDPETDRLFVTG 249 (264)
T ss_dssp EEEEETTSSEEEEEETTT-BEEEEEE-HHHHHHHTSTTST--TTS-EEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCeEEEEeCCCCeEEEEEEhhHhhhcccccccccccCCeeEeEeEeCCCCEEEEEe
Confidence 56655555566666666666544331 01 345789999887655 4555
No 398
>KOG2444 consensus WD40 repeat protein [General function prediction only]
Probab=95.37 E-value=0.06 Score=47.13 Aligned_cols=102 Identities=18% Similarity=0.158 Sum_probs=62.2
Q ss_pred CCEEEEecCCCeEEEEeccCcceeE-EeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-ccee
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQ-QFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVN 341 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~ 341 (502)
+..++.|+.+|.|.+|+......+. .+.....++.++-. .......++..++.|+.|.+...+.+.....|+ .++.
T Consensus 70 ~~~~~vG~~dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 70 SAKLMVGTSDGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred CceEEeecccceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCceeeeeccccCCCcc
Confidence 3568999999999999876221111 11111112222211 122355677899999999998888776666666 4444
Q ss_pred EEEEcCCCCEEEEE--eCCCcEEEEeCC
Q 010759 342 CVKWDPTGSLLASC--SDDVTAKIWNMK 367 (502)
Q Consensus 342 ~v~~~p~~~~l~sg--s~dg~i~iwd~~ 367 (502)
....+..+.+++.. |.|..++.|++.
T Consensus 150 ~~ivv~sd~~i~~a~~S~d~~~k~W~ve 177 (238)
T KOG2444|consen 150 ELIVVGSDEFLKIADTSHDRVLKKWNVE 177 (238)
T ss_pred eeEEecCCceEEeeccccchhhhhcchh
Confidence 44455556666666 667777777664
No 399
>KOG1916 consensus Nuclear protein, contains WD40 repeats [General function prediction only]
Probab=95.27 E-value=0.012 Score=60.98 Aligned_cols=113 Identities=18% Similarity=0.280 Sum_probs=65.0
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCC-----CCceeeecccCCC-cEEEEEEccCCCCC-CCCCCcEEEEEEeCCCeEEEEeC
Q 010759 345 WDPTGSLLASCSDDVTAKIWNMK-----QDKYVHDLREHSK-EIYTIRWSPTGSGT-NNPNQQLILASASFDSTVKLWDV 417 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg~i~iwd~~-----~~~~~~~~~~~~~-~i~~~~~sp~g~~~-~~~~~~~~l~sgs~dg~i~iwd~ 417 (502)
.||||+.||+++.||.+++|-+. .-++++..+.|++ +-.|..+..+.... ..+...++|-+...+..+++|..
T Consensus 243 lSpDGtv~a~a~~dG~v~f~Qiyi~g~~~~rclhewkphd~~p~vC~lc~~~~~~~v~i~~w~~~Itttd~nre~k~w~~ 322 (1283)
T KOG1916|consen 243 LSPDGTVFAWAISDGSVGFYQIYITGKIVHRCLHEWKPHDKHPRVCWLCHKQEILVVSIGKWVLRITTTDVNREEKFWAE 322 (1283)
T ss_pred eCCCCcEEEEeecCCccceeeeeeeccccHhhhhccCCCCCCCceeeeeccccccCCccceeEEEEecccCCcceeEeec
Confidence 79999999999999999888653 3345566666663 32222222221111 11122233444445667999998
Q ss_pred CCCeEEEEeeCCCCCEEEEEECCCCC--------E----EEEEeCCCcEEEEeCC
Q 010759 418 ELGKLLYSLNGHREPVYSLAFSPTGE--------Y----LASGSLDKSMHIWSLK 460 (502)
Q Consensus 418 ~~~~~~~~~~~h~~~v~~l~~spdg~--------~----lasgs~Dg~i~iw~~~ 460 (502)
...+|+.. -.-..|..+. -++|. | +++-+.++.|++|.-.
T Consensus 323 a~w~Cll~--~~~d~v~iV~-p~~~~v~~~~~~~~~~~~~v~r~v~~~i~~~qn~ 374 (1283)
T KOG1916|consen 323 APWQCLLD--KLIDGVQIVG-PHDGEVTDLSMCQWMTTRLVSRSVDGTIKIWQNR 374 (1283)
T ss_pred cchhhhhh--hcccceEeec-CCCccccchhhhHHHHHHHHHhhhHHHHHHhhcc
Confidence 77777622 1223344444 33332 2 3456778899999644
No 400
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=94.89 E-value=4.2 Score=39.86 Aligned_cols=238 Identities=14% Similarity=0.215 Sum_probs=100.3
Q ss_pred CCCEEEEEE-CCCcEEEEECCCc-----eeEeecC---CC----CCEEEEEecCCCCEEEEecCC------CeEEEEecc
Q 010759 224 EGTLLATGS-YDGQARIWSTNGD-----LKCTLSK---HK----GPIFSLKWNKKGDYLLTGSCD------KTAIVWDVK 284 (502)
Q Consensus 224 ~~~~l~sg~-~dg~i~iw~~~~~-----~~~~~~~---h~----~~V~~l~~~~~~~~l~sgs~D------~~v~iwd~~ 284 (502)
+.++|+..+ .++.|+|.|+... +..++.. +. ..-..+..-|+|+.++|+-.| |-+.+.|-.
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~~ 165 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDGE 165 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-TT
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcCc
Confidence 345666665 6789999997532 2222221 10 111334445788888875332 567777777
Q ss_pred CcceeEEeeecccCe-EE--EecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc
Q 010759 285 TEEWKQQFEFHSGPT-LD--VDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 360 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~-~~--~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~ 360 (502)
+.+....+.....+. .. +-|... ..++++.-. .|- .|. --|.|. .+..+....+
T Consensus 166 tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg-----------~P~-~~~--------~Gf~~~--d~~~~~yG~~ 223 (461)
T PF05694_consen 166 TFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWG-----------APS-MFE--------KGFNPE--DLEAGKYGHS 223 (461)
T ss_dssp T--EEEE--SB-TT------EEEETTTTEEEE-B--------------HH-HHT--------T---TT--THHHH-S--E
T ss_pred cccccceeccCCCCCCCCCCeEEcCCCCEEEEeccC-----------Chh-hcc--------cCCChh--HhhcccccCe
Confidence 766666554432211 11 111111 111111100 000 000 011221 1222334568
Q ss_pred EEEEeCCCCceeeecccCC--CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC-CCCe----EEEEeeCC----
Q 010759 361 AKIWNMKQDKYVHDLREHS--KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV-ELGK----LLYSLNGH---- 429 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~--~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~-~~~~----~~~~~~~h---- 429 (502)
+.+||+.+.+.++++.... .....|+|..+.. ...-++.+.-.++|..|-- ..++ .+..+..-
T Consensus 224 l~vWD~~~r~~~Q~idLg~~g~~pLEvRflH~P~------~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~ 297 (461)
T PF05694_consen 224 LHVWDWSTRKLLQTIDLGEEGQMPLEVRFLHDPD------ANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEG 297 (461)
T ss_dssp EEEEETTTTEEEEEEES-TTEEEEEEEEE-SSTT--------EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--S
T ss_pred EEEEECCCCcEeeEEecCCCCCceEEEEecCCCC------ccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCc
Confidence 9999999999988876432 3456677765533 2233444444555555433 3332 23333211
Q ss_pred -------------CCCEEEEEECCCCCEEEEEeC-CCcEEEEeCCCC---eeEEEE-ec----------------CCCEE
Q 010759 430 -------------REPVYSLAFSPTGEYLASGSL-DKSMHIWSLKEG---KIVKTY-TG----------------NGGIF 475 (502)
Q Consensus 430 -------------~~~v~~l~~spdg~~lasgs~-Dg~i~iw~~~~~---~~~~~~-~~----------------~~~i~ 475 (502)
..-|++|..|.|.+||..... .|.|+.||+.+- +++... -+ .++..
T Consensus 298 ~~lp~ml~~~~~~P~LitDI~iSlDDrfLYvs~W~~GdvrqYDISDP~~Pkl~gqv~lGG~~~~~~~~~v~g~~l~GgPq 377 (461)
T PF05694_consen 298 WILPEMLKPFGAVPPLITDILISLDDRFLYVSNWLHGDVRQYDISDPFNPKLVGQVFLGGSIRKGDHPVVKGKRLRGGPQ 377 (461)
T ss_dssp S---GGGGGG-EE------EEE-TTS-EEEEEETTTTEEEEEE-SSTTS-EEEEEEE-BTTTT-B--TTS------S---
T ss_pred ccccccccccccCCCceEeEEEccCCCEEEEEcccCCcEEEEecCCCCCCcEEeEEEECcEeccCCCccccccccCCCCC
Confidence 134799999999999977665 899999999764 333322 11 12335
Q ss_pred EEEECCCCCEEEEE
Q 010759 476 EVCWNKEGDKIAAC 489 (502)
Q Consensus 476 ~~~ws~~g~~la~~ 489 (502)
=++.|-||++|-..
T Consensus 378 MvqlS~DGkRlYvT 391 (461)
T PF05694_consen 378 MVQLSLDGKRLYVT 391 (461)
T ss_dssp -EEE-TTSSEEEEE
T ss_pred eEEEccCCeEEEEE
Confidence 57888999987655
No 401
>PHA03098 kelch-like protein; Provisional
Probab=94.73 E-value=1.9 Score=44.82 Aligned_cols=93 Identities=17% Similarity=0.212 Sum_probs=42.6
Q ss_pred eEEEEeccCcceeEEeeeccc-CeEEEecCCCceEEEEcCC-----CeEEEEEcCCCcce--eeecCCCcceeEEEEcCC
Q 010759 277 TAIVWDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDPT 348 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~p~ 348 (502)
.+..||+.+.+|...-..... .-.++...++..++.|+.+ ..+..|+..+++=. ..+....... +++ .-+
T Consensus 312 ~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~lp~~r~~~-~~~-~~~ 389 (534)
T PHA03098 312 SVVSYDTKTKSWNKVPELIYPRKNPGVTVFNNRIYVIGGIYNSISLNTVESWKPGESKWREEPPLIFPRYNP-CVV-NVN 389 (534)
T ss_pred cEEEEeCCCCeeeECCCCCcccccceEEEECCEEEEEeCCCCCEecceEEEEcCCCCceeeCCCcCcCCccc-eEE-EEC
Confidence 567888888877543211100 0112222345555666544 23555655443211 0111001111 122 235
Q ss_pred CCEEEEEeCC------CcEEEEeCCCCce
Q 010759 349 GSLLASCSDD------VTAKIWNMKQDKY 371 (502)
Q Consensus 349 ~~~l~sgs~d------g~i~iwd~~~~~~ 371 (502)
+++++.||.+ ..+..||..+.+.
T Consensus 390 ~~iYv~GG~~~~~~~~~~v~~yd~~t~~W 418 (534)
T PHA03098 390 NLIYVIGGISKNDELLKTVECFSLNTNKW 418 (534)
T ss_pred CEEEEECCcCCCCcccceEEEEeCCCCee
Confidence 6777777732 3577888776543
No 402
>PF14870 PSII_BNR: Photosynthesis system II assembly factor YCF48; PDB: 2XBG_A.
Probab=94.68 E-value=4 Score=38.54 Aligned_cols=109 Identities=19% Similarity=0.213 Sum_probs=55.6
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEE
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHI 456 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~i 456 (502)
.....+..+.-+++|. +++.++.-....-||.....-...-+.-...|.+|.|+|++.+.+.+ ..|.|++
T Consensus 142 ~~~gs~~~~~r~~dG~---------~vavs~~G~~~~s~~~G~~~w~~~~r~~~~riq~~gf~~~~~lw~~~-~Gg~~~~ 211 (302)
T PF14870_consen 142 ETSGSINDITRSSDGR---------YVAVSSRGNFYSSWDPGQTTWQPHNRNSSRRIQSMGFSPDGNLWMLA-RGGQIQF 211 (302)
T ss_dssp S----EEEEEE-TTS----------EEEEETTSSEEEEE-TT-SS-EEEE--SSS-EEEEEE-TTS-EEEEE-TTTEEEE
T ss_pred CCcceeEeEEECCCCc---------EEEEECcccEEEEecCCCccceEEccCccceehhceecCCCCEEEEe-CCcEEEE
Confidence 3446678888888886 66666555555677754221111122245789999999998876654 7788887
Q ss_pred EeC-CCCeeEEE--E---ecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 457 WSL-KEGKIVKT--Y---TGNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 457 w~~-~~~~~~~~--~---~~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
=+. ..+..-.. . ...-++.+++|.+++...|+|.. |++.
T Consensus 212 s~~~~~~~~w~~~~~~~~~~~~~~ld~a~~~~~~~wa~gg~-G~l~ 256 (302)
T PF14870_consen 212 SDDPDDGETWSEPIIPIKTNGYGILDLAYRPPNEIWAVGGS-GTLL 256 (302)
T ss_dssp EE-TTEEEEE---B-TTSS--S-EEEEEESSSS-EEEEEST-T-EE
T ss_pred ccCCCCccccccccCCcccCceeeEEEEecCCCCEEEEeCC-ccEE
Confidence 762 22111111 1 11234899999999877776654 4443
No 403
>PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation. It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues.
Probab=94.54 E-value=2.5 Score=38.91 Aligned_cols=108 Identities=15% Similarity=0.178 Sum_probs=65.2
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCC--CeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFD--STVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~d--g~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
.+.+.++++++.. +.+....+ ..++++... .....+ .+ ..++.-+|++++...+....+....++
T Consensus 25 ~~~s~AvS~dg~~--------~A~v~~~~~~~~L~~~~~~--~~~~~~~~g--~~l~~PS~d~~g~~W~v~~~~~~~~~~ 92 (253)
T PF10647_consen 25 DVTSPAVSPDGSR--------VAAVSEGDGGRSLYVGPAG--GPVRPVLTG--GSLTRPSWDPDGWVWTVDDGSGGVRVV 92 (253)
T ss_pred cccceEECCCCCe--------EEEEEEcCCCCEEEEEcCC--CcceeeccC--CccccccccCCCCEEEEEcCCCceEEE
Confidence 5778888998862 33333223 345555433 322222 32 367888999998877776666666666
Q ss_pred e-CCCCeeEE--E-EecCC-CEEEEEECCCCCEEEEEEC---CCeEEEEEe
Q 010759 458 S-LKEGKIVK--T-YTGNG-GIFEVCWNKEGDKIAACFA---NHTVCVLDF 500 (502)
Q Consensus 458 ~-~~~~~~~~--~-~~~~~-~i~~~~ws~~g~~la~~~~---~~~v~v~~~ 500 (502)
. ..++.... . ..... .|.++.+||||.++|.-.. ++.|.|--+
T Consensus 93 ~~~~~g~~~~~~v~~~~~~~~I~~l~vSpDG~RvA~v~~~~~~~~v~va~V 143 (253)
T PF10647_consen 93 RDSASGTGEPVEVDWPGLRGRITALRVSPDGTRVAVVVEDGGGGRVYVAGV 143 (253)
T ss_pred EecCCCcceeEEecccccCCceEEEEECCCCcEEEEEEecCCCCeEEEEEE
Confidence 4 33333221 1 12222 7999999999999998773 456666443
No 404
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=94.37 E-value=8.6 Score=41.11 Aligned_cols=92 Identities=16% Similarity=0.193 Sum_probs=53.1
Q ss_pred CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee-
Q 010759 255 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF- 333 (502)
Q Consensus 255 ~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~- 333 (502)
-.|..|.++|+|.+++..|..|.+.+.=.+.......+......+.+- .+.++. ..|
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r~g~~~~~~~g~~~i~Cr------------------t~~v~~----~~~~ 142 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVLELPRRWGKNGEFEDGKKEINCR------------------TVPVDE----RFFT 142 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEEEeccccCccccccCCCcceeEE------------------EEEech----hhcc
Confidence 357888999999998888876655444322211111111111111111 111111 011
Q ss_pred cCCCcceeEEEEcCC---CCEEEEEeCCCcEEEEeCCC
Q 010759 334 AGHQGEVNCVKWDPT---GSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~---~~~l~sgs~dg~i~iwd~~~ 368 (502)
..+...|..+.|||. +.+|+.-..|+++|+||+..
T Consensus 143 ~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~ 180 (717)
T PF10168_consen 143 SNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISD 180 (717)
T ss_pred CCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCC
Confidence 133457889999997 47888999999999999864
No 405
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=94.36 E-value=0.17 Score=31.71 Aligned_cols=31 Identities=26% Similarity=0.321 Sum_probs=26.7
Q ss_pred CCEEEEEECCCC---CEEEEEeCCCcEEEEeCCC
Q 010759 431 EPVYSLAFSPTG---EYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 431 ~~v~~l~~spdg---~~lasgs~Dg~i~iw~~~~ 461 (502)
+.|.++.|||.. .+||.+-.-|.|.|+|+++
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R~ 34 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTRS 34 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEccc
Confidence 468999999854 5899999999999999985
No 406
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.22 E-value=5.6 Score=38.36 Aligned_cols=72 Identities=14% Similarity=0.191 Sum_probs=43.6
Q ss_pred EEeeCCCCCEEEEEECC-------CCCEEEEEeCCCcEEEEeCCCCeeEE---EEe-cCC-CEEEEEECCCCCEEEEEEC
Q 010759 424 YSLNGHREPVYSLAFSP-------TGEYLASGSLDKSMHIWSLKEGKIVK---TYT-GNG-GIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~sp-------dg~~lasgs~Dg~i~iw~~~~~~~~~---~~~-~~~-~i~~~~ws~~g~~la~~~~ 491 (502)
..+..| ..++.+.|-. .|.++++.-..+.|....+..+..+. .+. ..+ .+.++++.|||.+.++-..
T Consensus 247 ~~~~~~-~ap~G~~~y~g~~fp~~~g~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~ 325 (331)
T PF07995_consen 247 FAYPPH-SAPTGIIFYRGSAFPEYRGDLFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDS 325 (331)
T ss_dssp EEETTT---EEEEEEE-SSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-T
T ss_pred eeecCc-cccCceEEECCccCccccCcEEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECC
Confidence 334434 4567777754 34456655556788888876443221 222 223 6899999999999888888
Q ss_pred CCeEE
Q 010759 492 NHTVC 496 (502)
Q Consensus 492 ~~~v~ 496 (502)
+|.|.
T Consensus 326 ~G~iy 330 (331)
T PF07995_consen 326 DGKIY 330 (331)
T ss_dssp TTTEE
T ss_pred CCeEe
Confidence 88874
No 407
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.17 E-value=2 Score=39.47 Aligned_cols=115 Identities=10% Similarity=0.277 Sum_probs=78.6
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEEeCCCcE
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs~Dg~i 454 (502)
+....+.++.|+|+.. .|++-.....--+|=...|+.+.++. +..+ -..|.|..+|+|.++--.++.+
T Consensus 83 g~~~nvS~LTynp~~r---------tLFav~n~p~~iVElt~~GdlirtiPL~g~~D-pE~Ieyig~n~fvi~dER~~~l 152 (316)
T COG3204 83 GETANVSSLTYNPDTR---------TLFAVTNKPAAIVELTKEGDLIRTIPLTGFSD-PETIEYIGGNQFVIVDERDRAL 152 (316)
T ss_pred cccccccceeeCCCcc---------eEEEecCCCceEEEEecCCceEEEecccccCC-hhHeEEecCCEEEEEehhcceE
Confidence 3345588999999875 34444444555566556688877753 3222 3567888889999998889999
Q ss_pred EEEeCCCCeeE----------EEEec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 455 HIWSLKEGKIV----------KTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 455 ~iw~~~~~~~~----------~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.++.+.....+ ..+.. +.+.-+++|+|....|.++-...=+.||.+.
T Consensus 153 ~~~~vd~~t~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 153 YLFTVDADTTVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred EEEEEcCCccEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 99988765221 11122 5567899999999998888777666666543
No 408
>PF07995 GSDH: Glucose / Sorbosone dehydrogenase; InterPro: IPR012938 Proteins containing this domain are thought to be glucose/sorbosone dehydrogenases. The best characterised of these proteins is soluble glucose dehydrogenase (P13650 from SWISSPROT) from Acinetobacter calcoaceticus, which oxidises glucose to gluconolactone. The enzyme is a calcium-dependent homodimer which uses PQQ as a cofactor [].; GO: 0016901 oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor, 0048038 quinone binding, 0005975 carbohydrate metabolic process; PDB: 2ISM_A 2WG3_D 3HO5_A 3HO4_A 3HO3_A 2WFT_A 2WG4_B 2WFX_B 1CRU_A 1CQ1_B ....
Probab=94.13 E-value=5.8 Score=38.24 Aligned_cols=54 Identities=15% Similarity=0.157 Sum_probs=34.3
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEE---E-eeCCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 402 ILASASFDSTVKLWDVELGKLLY---S-LNGHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~~~~~---~-~~~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
++++.-..+.|....+..+..+. . +......+..|++.|||.++++-..+|.|.
T Consensus 273 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~r~~~v~~~pDG~Lyv~~d~~G~iy 330 (331)
T PF07995_consen 273 LFVADYGGGRIWRLDLDEDGSVTEEEEFLGGFGGRPRDVAQGPDGALYVSDDSDGKIY 330 (331)
T ss_dssp EEEEETTTTEEEEEEEETTEEEEEEEEECTTSSS-EEEEEEETTSEEEEEE-TTTTEE
T ss_pred EEEecCCCCEEEEEeeecCCCccceEEccccCCCCceEEEEcCCCeEEEEECCCCeEe
Confidence 44444445677777776443322 2 233444799999999999888888888764
No 409
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=94.10 E-value=6.4 Score=41.04 Aligned_cols=52 Identities=19% Similarity=0.307 Sum_probs=39.8
Q ss_pred CCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC
Q 010759 233 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~ 285 (502)
.--.|+|++..|.+...+.-..+++.++.|+.+. .|+.-..||++.+|++-.
T Consensus 62 a~~~I~If~~sG~lL~~~~w~~~~lI~mgWs~~e-eLI~v~k~g~v~Vy~~~g 113 (829)
T KOG2280|consen 62 ARPYIRIFNISGQLLGRILWKHGELIGMGWSDDE-ELICVQKDGTVHVYGLLG 113 (829)
T ss_pred cceeEEEEeccccchHHHHhcCCCeeeecccCCc-eEEEEeccceEEEeecch
Confidence 3356899999888776655444588899999764 677778999999999743
No 410
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.95 E-value=5 Score=36.81 Aligned_cols=142 Identities=15% Similarity=0.204 Sum_probs=88.5
Q ss_pred EEEEcCCCC-EEEEEeCCCc-EEEEeCCCCceeeecccCCCcEE--EEEEccCCCCCCCCCCcEEEEEE-e---CCCeEE
Q 010759 342 CVKWDPTGS-LLASCSDDVT-AKIWNMKQDKYVHDLREHSKEIY--TIRWSPTGSGTNNPNQQLILASA-S---FDSTVK 413 (502)
Q Consensus 342 ~v~~~p~~~-~l~sgs~dg~-i~iwd~~~~~~~~~~~~~~~~i~--~~~~sp~g~~~~~~~~~~~l~sg-s---~dg~i~ 413 (502)
.++|+|.-. -++-+-.-|+ ..++|.........+....+.-+ .-.|||+|. ++-+|- . .-|.|-
T Consensus 72 gi~~~p~~~ravafARrPGtf~~vfD~~~~~~pv~~~s~~~RHfyGHGvfs~dG~--------~LYATEndfd~~rGViG 143 (366)
T COG3490 72 GIAFHPALPRAVAFARRPGTFAMVFDPNGAQEPVTLVSQEGRHFYGHGVFSPDGR--------LLYATENDFDPNRGVIG 143 (366)
T ss_pred CeecCCCCcceEEEEecCCceEEEECCCCCcCcEEEecccCceeecccccCCCCc--------EEEeecCCCCCCCceEE
Confidence 477777654 3666666665 46788877765554433222111 125778775 232331 1 236799
Q ss_pred EEeCCCC-eEEEEeeCCCCCEEEEEECCCCCEEEEEeC------C------------CcEEEEeCCCCeeEEEE--e---
Q 010759 414 LWDVELG-KLLYSLNGHREPVYSLAFSPTGEYLASGSL------D------------KSMHIWSLKEGKIVKTY--T--- 469 (502)
Q Consensus 414 iwd~~~~-~~~~~~~~h~~~v~~l~~spdg~~lasgs~------D------------g~i~iw~~~~~~~~~~~--~--- 469 (502)
|||.+.+ +.+.++..|.-.-..+.|.+||+.|+.+.. | -++.+-+..+|.++... +
T Consensus 144 vYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvanGGIethpdfgR~~lNldsMePSlvlld~atG~liekh~Lp~~l 223 (366)
T COG3490 144 VYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVANGGIETHPDFGRTELNLDSMEPSLVLLDAATGNLIEKHTLPASL 223 (366)
T ss_pred EEecccccceecccccCCcCcceeEEecCCcEEEEeCCceecccccCccccchhhcCccEEEEeccccchhhhccCchhh
Confidence 9998854 456678888777788999999999987653 1 23445565566654332 2
Q ss_pred cCCCEEEEEECCCCCEEEEEEC
Q 010759 470 GNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 470 ~~~~i~~~~ws~~g~~la~~~~ 491 (502)
..-.|..++..+||...+.|=.
T Consensus 224 ~~lSiRHld~g~dgtvwfgcQy 245 (366)
T COG3490 224 RQLSIRHLDIGRDGTVWFGCQY 245 (366)
T ss_pred hhcceeeeeeCCCCcEEEEEEe
Confidence 1235788999999988887743
No 411
>PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea. The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A.
Probab=93.91 E-value=7 Score=38.40 Aligned_cols=195 Identities=11% Similarity=0.119 Sum_probs=90.1
Q ss_pred CCCEEEEEe-CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeeccc-cc--CCCCeEEEEECCCCCEEEEEECC------
Q 010759 165 AGSLLASGS-GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT-NE--KSKDVTTLDWNGEGTLLATGSYD------ 234 (502)
Q Consensus 165 d~~~l~sgs-~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~V~~l~~s~~~~~l~sg~~d------ 234 (502)
+.++|...+ ..+.|.|.|+.+..... ...+.+.... .. .-..-..+.--|+|.+++|+-.|
T Consensus 86 ~Rr~Li~PgL~SsrIyviD~~~dPr~P---------~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~ 156 (461)
T PF05694_consen 86 ERRYLILPGLRSSRIYVIDTKTDPRKP---------RLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGP 156 (461)
T ss_dssp -S-EEEEEBTTT--EEEEE--S-TTS----------EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S-
T ss_pred cCCcEEeeeeccCcEEEEECCCCCCCC---------ceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCC
Confidence 456777777 66789999987543211 1111111100 00 00011122224688888876332
Q ss_pred CcEEEEECCCc-eeEeecC---CCCCEEEEEecCCCCEEEEecC--------------------CCeEEEEeccCcceeE
Q 010759 235 GQARIWSTNGD-LKCTLSK---HKGPIFSLKWNKKGDYLLTGSC--------------------DKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 235 g~i~iw~~~~~-~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~--------------------D~~v~iwd~~~~~~~~ 290 (502)
|.+.+.|-++. ....-.. ...--+.+-|.|..+.++|... -.++.+||+.+.+.++
T Consensus 157 Ggf~llD~~tf~v~g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q 236 (461)
T PF05694_consen 157 GGFVLLDGETFEVKGRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQ 236 (461)
T ss_dssp -EEEEE-TTT--EEEE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEE
T ss_pred CcEEEEcCccccccceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEee
Confidence 34556665532 2222211 1223467788898888888764 3689999999999999
Q ss_pred Eeeecc--cCeEEEecC----CCceEEEEcCCCeEEEEEcC-CCc----ceeeecC-----------------CCcceeE
Q 010759 291 QFEFHS--GPTLDVDWR----NNVSFATSSTDNMIYVCKIG-ENR----PIKTFAG-----------------HQGEVNC 342 (502)
Q Consensus 291 ~~~~~~--~~~~~~~~~----~~~~~~~~~~d~~i~~~~~~-~~~----~~~~~~~-----------------h~~~v~~ 342 (502)
++.... ..++.+.|. ...-|+.+.....|+.|-.. .+. .+..+.. -..-|+.
T Consensus 237 ~idLg~~g~~pLEvRflH~P~~~~gFvg~aLss~i~~~~k~~~g~W~a~kVi~ip~~~v~~~~lp~ml~~~~~~P~LitD 316 (461)
T PF05694_consen 237 TIDLGEEGQMPLEVRFLHDPDANYGFVGCALSSSIWRFYKDDDGEWAAEKVIDIPAKKVEGWILPEMLKPFGAVPPLITD 316 (461)
T ss_dssp EEES-TTEEEEEEEEE-SSTT--EEEEEEE--EEEEEEEE-ETTEEEEEEEEEE--EE--SS---GGGGGG-EE------
T ss_pred EEecCCCCCceEEEEecCCCCccceEEEEeccceEEEEEEcCCCCeeeeEEEECCCcccCcccccccccccccCCCceEe
Confidence 887654 345667663 23457777666777766542 211 1111110 1244788
Q ss_pred EEEcCCCCEEEEEe-CCCcEEEEeCCC
Q 010759 343 VKWDPTGSLLASCS-DDVTAKIWNMKQ 368 (502)
Q Consensus 343 v~~~p~~~~l~sgs-~dg~i~iwd~~~ 368 (502)
|.+|.|.++|..+. ..|.||.||+..
T Consensus 317 I~iSlDDrfLYvs~W~~GdvrqYDISD 343 (461)
T PF05694_consen 317 ILISLDDRFLYVSNWLHGDVRQYDISD 343 (461)
T ss_dssp EEE-TTS-EEEEEETTTTEEEEEE-SS
T ss_pred EEEccCCCEEEEEcccCCcEEEEecCC
Confidence 99999999876555 589999999864
No 412
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=93.89 E-value=1.2 Score=48.14 Aligned_cols=141 Identities=13% Similarity=0.104 Sum_probs=84.3
Q ss_pred ceeEEEEcCCCCEEE--EEeCCCcEEEEeCCCCceee-----ecc------cCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 339 EVNCVKWDPTGSLLA--SCSDDVTAKIWNMKQDKYVH-----DLR------EHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~--sgs~dg~i~iwd~~~~~~~~-----~~~------~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
.+..+.+.+|+...+ ..+.+-.|..||+++-..-. -|. .......++.|.|.-. ...+.
T Consensus 102 pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s~ts~ek~vf~~~~~wnP~vp--------~n~av 173 (1405)
T KOG3630|consen 102 PIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNSATSFEKPVFQLKNVWNPLVP--------LNSAV 173 (1405)
T ss_pred cceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccccchhccccccccccccCCcc--------chhhh
Confidence 344455566765533 33344467888876432110 011 1122234556666532 23566
Q ss_pred EeCCCeEEEEeCCCCeE-EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-----cCCCEEEEEE
Q 010759 406 ASFDSTVKLWDVELGKL-LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-----GNGGIFEVCW 479 (502)
Q Consensus 406 gs~dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-----~~~~i~~~~w 479 (502)
+..|+.|++.-+..... +..+ .....+++++|+|-|+.|+.|-..|++.-|... +.+...+. .+..|.+|+|
T Consensus 174 ~l~dlsl~V~~~~~~~~~v~s~-p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~-leik~~ip~Pp~~e~yrvl~v~W 251 (1405)
T KOG3630|consen 174 DLSDLSLRVKSTKQLAQNVTSF-PVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPS-LEIKSEIPEPPVEENYRVLSVTW 251 (1405)
T ss_pred hccccchhhhhhhhhhhhhccc-CcccceeeEEeccccceeeEecCCCeEEEeecc-cceeecccCCCcCCCcceeEEEE
Confidence 77888888876643222 2222 244568999999999999999999999998754 33222222 1467999999
Q ss_pred CCCCCEEEEE
Q 010759 480 NKEGDKIAAC 489 (502)
Q Consensus 480 s~~g~~la~~ 489 (502)
-..-.+|++-
T Consensus 252 l~t~eflvvy 261 (1405)
T KOG3630|consen 252 LSTQEFLVVY 261 (1405)
T ss_pred ecceeEEEEe
Confidence 8777666543
No 413
>COG3490 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.85 E-value=5.2 Score=36.69 Aligned_cols=54 Identities=17% Similarity=0.214 Sum_probs=40.6
Q ss_pred EECCCCCEEEEEECC-----CcEEEEECCCc--eeEeecCCCCCEEEEEecCCCCEEEEec
Q 010759 220 DWNGEGTLLATGSYD-----GQARIWSTNGD--LKCTLSKHKGPIFSLKWNKKGDYLLTGS 273 (502)
Q Consensus 220 ~~s~~~~~l~sg~~d-----g~i~iw~~~~~--~~~~~~~h~~~V~~l~~~~~~~~l~sgs 273 (502)
.||+||.+|+..-.| |.|=|||.... ....+..|.-.-..+.|.+||..++.+.
T Consensus 120 vfs~dG~~LYATEndfd~~rGViGvYd~r~~fqrvgE~~t~GiGpHev~lm~DGrtlvvan 180 (366)
T COG3490 120 VFSPDGRLLYATENDFDPNRGVIGVYDAREGFQRVGEFSTHGIGPHEVTLMADGRTLVVAN 180 (366)
T ss_pred ccCCCCcEEEeecCCCCCCCceEEEEecccccceecccccCCcCcceeEEecCCcEEEEeC
Confidence 589999999876544 78889997643 2345677776667889999999887764
No 414
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=93.74 E-value=4.7 Score=35.83 Aligned_cols=98 Identities=19% Similarity=0.260 Sum_probs=60.2
Q ss_pred cceeEEEEcCCCCE-EEEEeCCCcEEEEe--CCCCce-----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 338 GEVNCVKWDPTGSL-LASCSDDVTAKIWN--MKQDKY-----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 338 ~~v~~v~~~p~~~~-l~sgs~dg~i~iwd--~~~~~~-----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
+.-+.++|+.+.+. .++-+.+.+|.-|| ..++.. +..++... +.- ..-|+|... .....++ ++.-..
T Consensus 158 ~IsNgl~Wd~d~K~fY~iDsln~~V~a~dyd~~tG~~snr~~i~dlrk~~-~~e--~~~PDGm~I-D~eG~L~-Va~~ng 232 (310)
T KOG4499|consen 158 GISNGLAWDSDAKKFYYIDSLNYEVDAYDYDCPTGDLSNRKVIFDLRKSQ-PFE--SLEPDGMTI-DTEGNLY-VATFNG 232 (310)
T ss_pred cCCccccccccCcEEEEEccCceEEeeeecCCCcccccCcceeEEeccCC-CcC--CCCCCcceE-ccCCcEE-EEEecC
Confidence 34567889877665 45667778887787 444432 22222110 000 012444322 1223344 445567
Q ss_pred CeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 410 STVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
|+|...|..+|+.+.++.--...|++++|--
T Consensus 233 ~~V~~~dp~tGK~L~eiklPt~qitsccFgG 263 (310)
T KOG4499|consen 233 GTVQKVDPTTGKILLEIKLPTPQITSCCFGG 263 (310)
T ss_pred cEEEEECCCCCcEEEEEEcCCCceEEEEecC
Confidence 8999999999999999887788899999963
No 415
>TIGR03074 PQQ_membr_DH membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family. This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Members of this family have several predicted transmembrane helices in the N-terminal region, and include the quinoprotein glucose dehydrogenase (EC 1.1.5.2) of Escherichia coli and the quinate/shikimate dehydrogenase of Acinetobacter sp. ADP1 (EC 1.1.99.25). Sequences closely related except for the absense of the N-terminal hydrophobic region, scoring in the gray zone between the trusted and noise cutoffs, include PQQ-dependent glycerol (EC 1.1.99.22) and and other polyol (sugar alcohol) dehydrogenases.
Probab=93.59 E-value=13 Score=40.26 Aligned_cols=151 Identities=15% Similarity=0.182 Sum_probs=85.1
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE-EEEE--ccCCC--CCCCC--CCcEEEEEEeC----------CCe
Q 010759 349 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY-TIRW--SPTGS--GTNNP--NQQLILASASF----------DST 411 (502)
Q Consensus 349 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~-~~~~--sp~g~--~~~~~--~~~~~l~sgs~----------dg~ 411 (502)
+..|+.++.|+.+.-.|.++++.+-.+... +.+. ...+ .+.+. ....| ... .++.|+. +|.
T Consensus 260 ~~rV~~~T~Dg~LiALDA~TGk~~W~fg~~-G~vdl~~~~g~~~~g~~~~ts~P~V~~g-~VIvG~~v~d~~~~~~~~G~ 337 (764)
T TIGR03074 260 ARRIILPTSDARLIALDADTGKLCEDFGNN-GTVDLTAGMGTTPPGYYYPTSPPLVAGT-TVVIGGRVADNYSTDEPSGV 337 (764)
T ss_pred CCEEEEecCCCeEEEEECCCCCEEEEecCC-CceeeecccCcCCCcccccccCCEEECC-EEEEEecccccccccCCCcE
Confidence 347778889999999999999888665321 1110 0000 00000 00000 011 2334432 688
Q ss_pred EEEEeCCCCeEEEEeeCC---------C--------CCE-EEEEECCCCCEEEEEe------------------CCCcEE
Q 010759 412 VKLWDVELGKLLYSLNGH---------R--------EPV-YSLAFSPTGEYLASGS------------------LDKSMH 455 (502)
Q Consensus 412 i~iwd~~~~~~~~~~~~h---------~--------~~v-~~l~~spdg~~lasgs------------------~Dg~i~ 455 (502)
|+-+|..+|+.++.+..- . ..+ ..+++.|....+..+. ..+.|.
T Consensus 338 I~A~Da~TGkl~W~~~~g~p~~~~~~~~g~~~~~gg~n~W~~~s~D~~~glvy~ptGn~~pd~~g~~r~~~~n~y~~slv 417 (764)
T TIGR03074 338 IRAFDVNTGALVWAWDPGNPDPTAPPAPGETYTRNTPNSWSVASYDEKLGLVYLPMGNQTPDQWGGDRTPADEKYSSSLV 417 (764)
T ss_pred EEEEECCCCcEeeEEecCCCCcccCCCCCCEeccCCCCccCceEEcCCCCeEEEeCCCccccccCCccccCcccccceEE
Confidence 999999999999876421 0 011 2234444433332211 235678
Q ss_pred EEeCCCCeeEEEEec-CCCEE---------EEEECC-CCC---EEEEEECCCeEEEEEee
Q 010759 456 IWSLKEGKIVKTYTG-NGGIF---------EVCWNK-EGD---KIAACFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~~~~~~~~-~~~i~---------~~~ws~-~g~---~la~~~~~~~v~v~~~~ 501 (502)
-.|+++|++...+.. +..++ -+.+.. +|+ .++.+..+|.++++|-+
T Consensus 418 ALD~~TGk~~W~~Q~~~hD~WD~D~~~~p~L~d~~~~~G~~~~~v~~~~K~G~~~vlDr~ 477 (764)
T TIGR03074 418 ALDATTGKERWVFQTVHHDLWDMDVPAQPSLVDLPDADGTTVPALVAPTKQGQIYVLDRR 477 (764)
T ss_pred EEeCCCCceEEEecccCCccccccccCCceEEeeecCCCcEeeEEEEECCCCEEEEEECC
Confidence 888999998877754 22221 122323 664 78889999999999853
No 416
>TIGR02604 Piru_Ver_Nterm putative membrane-bound dehydrogenase domain. All proteins that score above the trusted cutoff score of 45 to this model are large proteins of either Pirellula sp. 1 or Verrucomicrobium spinosum. These proteins all contain, in addition to this domain, several hundred residues of highly variable sequence, and then a well-conserved C-terminal domain (TIGR02603) that features a putative cytochrome c-type heme binding motif CXXCH. The membrane-bound L-sorbosone dehydrogenase from Acetobacter liquefaciens (Gluconacetobacter liquefaciens) is homologous to this domain but lacks additional sequence regions shared by members of this family and belongs to a different clade of the larger family of homologs. It and its closely related homologs are excluded from the this model by scoring between the trusted (45) and noise (18) cutoffs.
Probab=93.37 E-value=5.5 Score=39.04 Aligned_cols=102 Identities=15% Similarity=0.249 Sum_probs=53.7
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----c---eeeeccc----CCCcEEEEEEccCCCCCCCCCCcEEEEEE
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-----K---YVHDLRE----HSKEIYTIRWSPTGSGTNNPNQQLILASA 406 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~-----~---~~~~~~~----~~~~i~~~~~sp~g~~~~~~~~~~~l~sg 406 (502)
....+++.++| ++++ +.....++.|.... + .+..+.. +......++|.|+|. +|+..|
T Consensus 73 ~p~Gi~~~~~G-lyV~-~~~~i~~~~d~~gdg~ad~~~~~l~~~~~~~~~~~~~~~~~l~~gpDG~--------LYv~~G 142 (367)
T TIGR02604 73 MVTGLAVAVGG-VYVA-TPPDILFLRDKDGDDKADGEREVLLSGFGGQINNHHHSLNSLAWGPDGW--------LYFNHG 142 (367)
T ss_pred CccceeEecCC-EEEe-CCCeEEEEeCCCCCCCCCCccEEEEEccCCCCCcccccccCceECCCCC--------EEEecc
Confidence 45678888888 5544 33333334344221 1 1122222 133466788888875 345444
Q ss_pred eC------------------CCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 407 SF------------------DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 407 s~------------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
+. .|.|.-++...++......++ ...+.++|+|+|+++++-..+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~g~i~r~~pdg~~~e~~a~G~-rnp~Gl~~d~~G~l~~tdn~~ 204 (367)
T TIGR02604 143 NTLASKVTRPGTSDESRQGLGGGLFRYNPDGGKLRVVAHGF-QNPYGHSVDSWGDVFFCDNDD 204 (367)
T ss_pred cCCCceeccCCCccCcccccCceEEEEecCCCeEEEEecCc-CCCccceECCCCCEEEEccCC
Confidence 31 134555555544432222333 335789999999988765433
No 417
>PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A.
Probab=93.34 E-value=8.3 Score=37.43 Aligned_cols=105 Identities=21% Similarity=0.313 Sum_probs=46.1
Q ss_pred EEcCCCCEEEEEe-----CCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC---------
Q 010759 344 KWDPTGSLLASCS-----DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD--------- 409 (502)
Q Consensus 344 ~~~p~~~~l~sgs-----~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d--------- 409 (502)
-|.|||..|.--+ .+..|.-+|..++....... ......+--+++|. +++.=+.|
T Consensus 244 fw~~DG~~i~y~~~~~~~~~~~i~~~d~~t~~~~~~~~--~p~~~H~~ss~Dg~---------L~vGDG~d~p~~v~~~~ 312 (386)
T PF14583_consen 244 FWVPDGSTIWYDSYTPGGQDFWIAGYDPDTGERRRLME--MPWCSHFMSSPDGK---------LFVGDGGDAPVDVADAG 312 (386)
T ss_dssp EE-TTSS-EEEEEEETTT--EEEEEE-TTT--EEEEEE--E-SEEEEEE-TTSS---------EEEEEE-----------
T ss_pred cccCCCCEEEEEeecCCCCceEEEeeCCCCCCceEEEe--CCceeeeEEcCCCC---------EEEecCCCCCccccccc
Confidence 4788887654322 23345556777665432221 12344445566665 22221222
Q ss_pred -------CeEEEEeCCCCeEEEE---------eeCCCC-CEEEEEECCCCCEEE-EEeCCCcEEEEeC
Q 010759 410 -------STVKLWDVELGKLLYS---------LNGHRE-PVYSLAFSPTGEYLA-SGSLDKSMHIWSL 459 (502)
Q Consensus 410 -------g~i~iwd~~~~~~~~~---------~~~h~~-~v~~l~~spdg~~la-sgs~Dg~i~iw~~ 459 (502)
-.|+++++..+....- +.++.. .=-...|||||++++ ++...|...||-+
T Consensus 313 ~~~~~~~p~i~~~~~~~~~~~~l~~h~~sw~v~~~~~q~~hPhp~FSPDgk~VlF~Sd~~G~~~vY~v 380 (386)
T PF14583_consen 313 GYKIENDPWIYLFDVEAGRFRKLARHDTSWKVLDGDRQVTHPHPSFSPDGKWVLFRSDMEGPPAVYLV 380 (386)
T ss_dssp --------EEEEEETTTTEEEEEEE-------BTTBSSTT----EE-TTSSEEEEEE-TTSS-EEEEE
T ss_pred cceecCCcEEEEeccccCceeeeeeccCcceeecCCCccCCCCCccCCCCCEEEEECCCCCCccEEEE
Confidence 2567788877654311 122111 124579999999876 4556777777643
No 418
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=93.29 E-value=0.58 Score=42.00 Aligned_cols=64 Identities=20% Similarity=0.292 Sum_probs=48.7
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE---------------ecCCCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEGKIVKTY---------------TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~---------------~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
+..++.+|++-+.+|.+++||+.+++.+... .....|..+..+.+|.-|++- .||..++|+..|
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~l-sng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTL-SNGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEE-eCCCEEEecccc
Confidence 4456889999999999999999998764332 123458889999999877654 567889998654
No 419
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=93.18 E-value=7.9 Score=37.96 Aligned_cols=126 Identities=16% Similarity=0.312 Sum_probs=80.4
Q ss_pred ceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 329 PIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 329 ~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
|+..-....|+|.++.||+|.+.+|.-..+.+|.+++...... .++.+.....|....|+.... +|
T Consensus 58 piSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~k~~~IlGF~W~~s~e----------~A 127 (657)
T KOG2377|consen 58 PISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTE----------IA 127 (657)
T ss_pred CceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhccCcceeEEEEEecCee----------EE
Confidence 3333334567999999999999999999999999998743332 233344455688889976532 33
Q ss_pred EEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEeCCCCeeE
Q 010759 405 SASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLASGS--LDKSMHIWSLKEGKIV 465 (502)
Q Consensus 405 sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~lasgs--~Dg~i~iw~~~~~~~~ 465 (502)
--+..| +-+|-+.. .+.+...+.|...|+--.|.|+...+.-++ ..+++.=+.++++.+.
T Consensus 128 ~i~~~G-~e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~t~~~~n~lnpf~~~~~~v~ 190 (657)
T KOG2377|consen 128 FITDQG-IEFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLSTTVLENVLNPFHFRAGTMS 190 (657)
T ss_pred EEecCC-eEEEEEchhhhhhhhhhhcccCccEEEEccccceEeeeccccccccccEEEeeceee
Confidence 333333 55665432 223344566777888888999876544332 4555666666665543
No 420
>PHA02790 Kelch-like protein; Provisional
Probab=93.15 E-value=7.2 Score=39.85 Aligned_cols=103 Identities=11% Similarity=0.054 Sum_probs=49.4
Q ss_pred CEEEEecCC-----CeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCC--CeEEEEEcCCCc--ceeeecCC
Q 010759 267 DYLLTGSCD-----KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD--NMIYVCKIGENR--PIKTFAGH 336 (502)
Q Consensus 267 ~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d--~~i~~~~~~~~~--~~~~~~~h 336 (502)
..++.|+.+ .++..||+.+..|...-...... .......++..++.++.+ ..+..|+...+. .+..+...
T Consensus 273 ~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~~~~v~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~l~~~ 352 (480)
T PHA02790 273 VVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLYASGVPANNKLYVVGGLPNPTSVERWFHGDAAWVNMPSLLKP 352 (480)
T ss_pred EEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhcceEEEECCEEEEECCcCCCCceEEEECCCCeEEECCCCCCC
Confidence 344556544 35777888887775533221111 111222345556666543 345556544321 11111111
Q ss_pred CcceeEEEEcCCCCEEEEEeCCC---cEEEEeCCCCce
Q 010759 337 QGEVNCVKWDPTGSLLASCSDDV---TAKIWNMKQDKY 371 (502)
Q Consensus 337 ~~~v~~v~~~p~~~~l~sgs~dg---~i~iwd~~~~~~ 371 (502)
......+. -+|++.+.||.++ .+..||..+...
T Consensus 353 r~~~~~~~--~~g~IYviGG~~~~~~~ve~ydp~~~~W 388 (480)
T PHA02790 353 RCNPAVAS--INNVIYVIGGHSETDTTTEYLLPNHDQW 388 (480)
T ss_pred CcccEEEE--ECCEEEEecCcCCCCccEEEEeCCCCEE
Confidence 11111222 2677888887654 466788766544
No 421
>PHA03098 kelch-like protein; Provisional
Probab=93.02 E-value=5.7 Score=41.22 Aligned_cols=144 Identities=10% Similarity=0.098 Sum_probs=66.3
Q ss_pred CCCEEEEEECCC------cEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEecCC-----CeEEEEeccCccee
Q 010759 224 EGTLLATGSYDG------QARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWK 289 (502)
Q Consensus 224 ~~~~l~sg~~dg------~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~D-----~~v~iwd~~~~~~~ 289 (502)
++.+++.||.++ .+..||.....-..+.. .......+.+ ++..++.||.+ ..+..||+.+..|.
T Consensus 294 ~~~lyv~GG~~~~~~~~~~v~~yd~~~~~W~~~~~~~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~v~~yd~~~~~W~ 371 (534)
T PHA03098 294 NNVIYFIGGMNKNNLSVNSVVSYDTKTKSWNKVPELIYPRKNPGVTVF--NNRIYVIGGIYNSISLNTVESWKPGESKWR 371 (534)
T ss_pred CCEEEEECCCcCCCCeeccEEEEeCCCCeeeECCCCCcccccceEEEE--CCEEEEEeCCCCCEecceEEEEcCCCCcee
Confidence 456666776543 45666654432222211 1111112222 45566667665 35778999888876
Q ss_pred EEeeecccC-eEEEecCCCceEEEEcCC------CeEEEEEcCCCcc--eeeecCCCcceeEEEEcCCCCEEEEEeCCC-
Q 010759 290 QQFEFHSGP-TLDVDWRNNVSFATSSTD------NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDV- 359 (502)
Q Consensus 290 ~~~~~~~~~-~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg- 359 (502)
..-...... ..+....++..++.++.+ +.+..++..+.+= +..+....... ++. ..++.+++.|+.++
T Consensus 372 ~~~~lp~~r~~~~~~~~~~~iYv~GG~~~~~~~~~~v~~yd~~t~~W~~~~~~p~~r~~~-~~~-~~~~~iyv~GG~~~~ 449 (534)
T PHA03098 372 EEPPLIFPRYNPCVVNVNNLIYVIGGISKNDELLKTVECFSLNTNKWSKGSPLPISHYGG-CAI-YHDGKIYVIGGISYI 449 (534)
T ss_pred eCCCcCcCCccceEEEECCEEEEECCcCCCCcccceEEEEeCCCCeeeecCCCCccccCc-eEE-EECCEEEEECCccCC
Confidence 432211110 111222344555555521 3466677654321 11111001111 122 23566777776532
Q ss_pred -------cEEEEeCCCCce
Q 010759 360 -------TAKIWNMKQDKY 371 (502)
Q Consensus 360 -------~i~iwd~~~~~~ 371 (502)
.+.+||..+.+.
T Consensus 450 ~~~~~~~~v~~yd~~~~~W 468 (534)
T PHA03098 450 DNIKVYNIVESYNPVTNKW 468 (534)
T ss_pred CCCcccceEEEecCCCCce
Confidence 377888776554
No 422
>KOG1897 consensus Damage-specific DNA binding complex, subunit DDB1 [Replication, recombination and repair]
Probab=92.99 E-value=16 Score=39.58 Aligned_cols=312 Identities=13% Similarity=0.162 Sum_probs=159.8
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 235 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg 235 (502)
.|-...|--|..+|+++..||.+.-+-+....-.. ...+.. .-...|+.--.|+..++.-+-+..|+
T Consensus 585 SIl~~~~e~d~~yLlvalgdG~l~~fv~d~~tg~l---------sd~Kk~----~lGt~P~~Lr~f~sk~~t~vfa~sdr 651 (1096)
T KOG1897|consen 585 SILLTTFEGDIHYLLVALGDGALLYFVLDINTGQL---------SDRKKV----TLGTQPISLRTFSSKSRTAVFALSDR 651 (1096)
T ss_pred heeeEEeeccceEEEEEcCCceEEEEEEEcccceE---------cccccc----ccCCCCcEEEEEeeCCceEEEEeCCC
Confidence 45555666678899999999999877654322110 000100 01134566666776665555566677
Q ss_pred cEEEEECCCceeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcc--eeEEeeecccCeEEEecCC-CceE
Q 010759 236 QARIWSTNGDLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWRN-NVSF 310 (502)
Q Consensus 236 ~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~-~~~~ 310 (502)
-..+|..++.+..+--.-+.--....|+.+ ...|+++.. +.+++--+..-. ..++...+ .....+.+.+ ...|
T Consensus 652 P~viY~~n~kLv~spls~kev~~~c~f~s~a~~d~l~~~~~-~~l~i~tid~iqkl~irtvpl~-~~prrI~~q~~sl~~ 729 (1096)
T KOG1897|consen 652 PTVIYSSNGKLVYSPLSLKEVNHMCPFNSDAYPDSLASANG-GALTIGTIDEIQKLHIRTVPLG-ESPRRICYQESSLTF 729 (1096)
T ss_pred CEEEEecCCcEEEeccchHHhhhhcccccccCCceEEEecC-CceEEEEecchhhcceeeecCC-CChhheEecccceEE
Confidence 777777766654332111111111223322 234555543 455555433211 11222111 1122233332 1122
Q ss_pred EEEcC-----------CC---eEEEEEcCCCcceeeecCCC-------cceeEEEEcCC-CCEEEEEeC----------C
Q 010759 311 ATSST-----------DN---MIYVCKIGENRPIKTFAGHQ-------GEVNCVKWDPT-GSLLASCSD----------D 358 (502)
Q Consensus 311 ~~~~~-----------d~---~i~~~~~~~~~~~~~~~~h~-------~~v~~v~~~p~-~~~l~sgs~----------d 358 (502)
...+. .. .++++|-.+. ..+..|. -.+.++.|..| +.+++.|+. .
T Consensus 730 ~v~s~r~e~~~~~~~ee~~~s~l~vlD~nTf---~vl~~hef~~~E~~~Si~s~~~~~d~~t~~vVGT~~v~Pde~ep~~ 806 (1096)
T KOG1897|consen 730 GVLSNRIESSAEYYGEEYEVSFLRVLDQNTF---EVLSSHEFERNETALSIISCKFTDDPNTYYVVGTGLVYPDENEPVN 806 (1096)
T ss_pred EEEecccccchhhcCCcceEEEEEEecCCce---eEEeeccccccceeeeeeeeeecCCCceEEEEEEEeeccCCCCccc
Confidence 22211 11 2333433332 2233332 23556668777 677777752 4
Q ss_pred CcEEEEeCCCCceeeeccc--CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEE
Q 010759 359 VTAKIWNMKQDKYVHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSL 436 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~~--~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l 436 (502)
|.|.+|.+...+.+..... -.+.++++.- -+|. +| ++-...|++|++.+.+.++.-..|..++..+
T Consensus 807 GRIivfe~~e~~~L~~v~e~~v~Gav~aL~~-fngk---------ll--A~In~~vrLye~t~~~eLr~e~~~~~~~~aL 874 (1096)
T KOG1897|consen 807 GRIIVFEFEELNSLELVAETVVKGAVYALVE-FNGK---------LL--AGINQSVRLYEWTTERELRIECNISNPIIAL 874 (1096)
T ss_pred ceEEEEEEecCCceeeeeeeeeccceeehhh-hCCe---------EE--EecCcEEEEEEccccceehhhhcccCCeEEE
Confidence 6677776554222211111 1234444432 1222 33 4567799999999987777777788999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCC--CeeEEEEe--cCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 437 AFSPTGEYLASGSLDKSMHIWSLKE--GKIVKTYT--GNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 437 ~~spdg~~lasgs~Dg~i~iw~~~~--~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
...-.|..++.|.--++|.+-..+. |.....-. ....+.++.+- +++.++.+..+|.+++.
T Consensus 875 ~l~v~gdeI~VgDlm~Sitll~y~~~eg~f~evArD~~p~Wmtaveil-~~d~ylgae~~gNlf~v 939 (1096)
T KOG1897|consen 875 DLQVKGDEIAVGDLMRSITLLQYKGDEGNFEEVARDYNPNWMTAVEIL-DDDTYLGAENSGNLFTV 939 (1096)
T ss_pred EEEecCcEEEEeeccceEEEEEEeccCCceEEeehhhCccceeeEEEe-cCceEEeecccccEEEE
Confidence 9999999999998888777665543 33332221 12234555553 34445555556665543
No 423
>KOG3630 consensus Nuclear pore complex, Nup214/CAN component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=92.89 E-value=0.55 Score=50.63 Aligned_cols=152 Identities=16% Similarity=0.122 Sum_probs=89.2
Q ss_pred cceeEEEECCCCCEE--EEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC-CEEEEE
Q 010759 155 SEVCACAWSPAGSLL--ASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG-TLLATG 231 (502)
Q Consensus 155 ~~V~~~~~spd~~~l--~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~-~~l~sg 231 (502)
-+|..+..++|++.. +..+.+-.|..||+..-......+..++... ........-+.++.|+|.- ...+..
T Consensus 101 ~pi~~~v~~~D~t~s~v~~tsng~~v~~fD~~~fs~s~~~~~~pl~~s------~ts~ek~vf~~~~~wnP~vp~n~av~ 174 (1405)
T KOG3630|consen 101 IPIVIFVCFHDATDSVVVSTSNGEAVYSFDLEEFSESRYETTVPLKNS------ATSFEKPVFQLKNVWNPLVPLNSAVD 174 (1405)
T ss_pred ccceEEEeccCCceEEEEEecCCceEEEEehHhhhhhhhhhccccccc------cchhccccccccccccCCccchhhhh
Confidence 345666667787643 3445555788999865322111111111100 0001122346788898853 345667
Q ss_pred ECCCcEEEEECCCcee-EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee----cccCeEEEecCC
Q 010759 232 SYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF----HSGPTLDVDWRN 306 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~----~~~~~~~~~~~~ 306 (502)
..|+.|++..+..... +.-...+..+++++|+|.|.+++.|-..|++..|-..- +.+..+.. ....+.++.|..
T Consensus 175 l~dlsl~V~~~~~~~~~v~s~p~t~~~Tav~WSprGKQl~iG~nnGt~vQy~P~l-eik~~ip~Pp~~e~yrvl~v~Wl~ 253 (1405)
T KOG3630|consen 175 LSDLSLRVKSTKQLAQNVTSFPVTNSQTAVLWSPRGKQLFIGRNNGTEVQYEPSL-EIKSEIPEPPVEENYRVLSVTWLS 253 (1405)
T ss_pred ccccchhhhhhhhhhhhhcccCcccceeeEEeccccceeeEecCCCeEEEeeccc-ceeecccCCCcCCCcceeEEEEec
Confidence 7888998887543211 11123456789999999999999999999999997543 22222211 135678888977
Q ss_pred CceEEEE
Q 010759 307 NVSFATS 313 (502)
Q Consensus 307 ~~~~~~~ 313 (502)
...|+..
T Consensus 254 t~eflvv 260 (1405)
T KOG3630|consen 254 TQEFLVV 260 (1405)
T ss_pred ceeEEEE
Confidence 7666543
No 424
>KOG4499 consensus Ca2+-binding protein Regucalcin/SMP30 [Inorganic ion transport and metabolism; Signal transduction mechanisms]
Probab=92.83 E-value=6.7 Score=34.94 Aligned_cols=135 Identities=16% Similarity=0.196 Sum_probs=76.3
Q ss_pred cceeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCceeeecccCC--------CcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 338 GEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLREHS--------KEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~~~--------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
...+.-..+|+|++++ |.. |-.- ++....+.+...+.+|+ .--..++|+.+. +.+-..-+.
T Consensus 109 nR~NDgkvdP~Gryy~-GtMad~~~-~le~~~g~Ly~~~~~h~v~~i~~~v~IsNgl~Wd~d~--------K~fY~iDsl 178 (310)
T KOG4499|consen 109 NRLNDGKVDPDGRYYG-GTMADFGD-DLEPIGGELYSWLAGHQVELIWNCVGISNGLAWDSDA--------KKFYYIDSL 178 (310)
T ss_pred cccccCccCCCCceee-eeeccccc-cccccccEEEEeccCCCceeeehhccCCccccccccC--------cEEEEEccC
Confidence 4566677899999854 332 2111 11111222222222222 112345555333 334455667
Q ss_pred CCeEEEEe--CCCC-----eEEEEeeCC---CCC-EEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEE
Q 010759 409 DSTVKLWD--VELG-----KLLYSLNGH---REP-VYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFE 476 (502)
Q Consensus 409 dg~i~iwd--~~~~-----~~~~~~~~h---~~~-v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~ 476 (502)
+-.|.-|| +.+| +.++.++.. ... --.++..-+|.+.++.=..++|..+|..+|+++.++.- -..|++
T Consensus 179 n~~V~a~dyd~~tG~~snr~~i~dlrk~~~~e~~~PDGm~ID~eG~L~Va~~ng~~V~~~dp~tGK~L~eiklPt~qits 258 (310)
T KOG4499|consen 179 NYEVDAYDYDCPTGDLSNRKVIFDLRKSQPFESLEPDGMTIDTEGNLYVATFNGGTVQKVDPTTGKILLEIKLPTPQITS 258 (310)
T ss_pred ceEEeeeecCCCcccccCcceeEEeccCCCcCCCCCCcceEccCCcEEEEEecCcEEEEECCCCCcEEEEEEcCCCceEE
Confidence 77787787 4444 344444321 111 12244455677777777788999999999999988864 456999
Q ss_pred EEECCC
Q 010759 477 VCWNKE 482 (502)
Q Consensus 477 ~~ws~~ 482 (502)
+||--.
T Consensus 259 ccFgGk 264 (310)
T KOG4499|consen 259 CCFGGK 264 (310)
T ss_pred EEecCC
Confidence 999655
No 425
>PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins. It contains a characteristic DLL sequence motif.
Probab=92.79 E-value=0.39 Score=30.09 Aligned_cols=30 Identities=27% Similarity=0.319 Sum_probs=25.9
Q ss_pred CCEEEEEECCC-C--CEEEEEECCCeEEEEEee
Q 010759 472 GGIFEVCWNKE-G--DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 472 ~~i~~~~ws~~-g--~~la~~~~~~~v~v~~~~ 501 (502)
+++.++.|+|. + +.||.+-..+.|+|+|+|
T Consensus 1 GAvR~~kFsP~~~~~DLL~~~E~~g~vhi~D~R 33 (43)
T PF10313_consen 1 GAVRCCKFSPEPGGNDLLAWAEHQGRVHIVDTR 33 (43)
T ss_pred CCeEEEEeCCCCCcccEEEEEccCCeEEEEEcc
Confidence 46788999985 4 599999999999999998
No 426
>PF15390 DUF4613: Domain of unknown function (DUF4613)
Probab=92.53 E-value=5.6 Score=40.31 Aligned_cols=147 Identities=16% Similarity=0.316 Sum_probs=79.6
Q ss_pred CCeEEEEECCCCCEEEEEE--CCCcEEEEECCCceeEeecCCCCCEEEEEecCCC----CEEEEecCCCeEEEEecc---
Q 010759 214 KDVTTLDWNGEGTLLATGS--YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG----DYLLTGSCDKTAIVWDVK--- 284 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~--~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~----~~l~sgs~D~~v~iwd~~--- 284 (502)
.+|..++|....+.+++.- .+|.+++=|. ..-+.-.-|+++.|.|-+ ..|++....+.|.+|.+.
T Consensus 20 HPvhGlaWTDGkqVvLT~L~l~~gE~kfGds------~viGqFEhV~GlsW~P~~~~~~paLLAVQHkkhVtVWqL~~s~ 93 (671)
T PF15390_consen 20 HPVHGLAWTDGKQVVLTDLQLHNGEPKFGDS------KVIGQFEHVHGLSWAPPCTADTPALLAVQHKKHVTVWQLCPST 93 (671)
T ss_pred ccccceEecCCCEEEEEeeeeeCCccccCCc------cEeeccceeeeeeecCcccCCCCceEEEeccceEEEEEeccCc
Confidence 4688999985555555542 2333332221 122333568999999863 467777888999999875
Q ss_pred --CcceeEEeeecc---cCe--EEEecCCCceE--EEEcCCCeEEEEEcC-CCcceeeecCCCcceeEEEEcCCCCEEEE
Q 010759 285 --TEEWKQQFEFHS---GPT--LDVDWRNNVSF--ATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLAS 354 (502)
Q Consensus 285 --~~~~~~~~~~~~---~~~--~~~~~~~~~~~--~~~~~d~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 354 (502)
+.++......+- -|+ ...-|++...+ +....|-.|.. ++. .+..++.=-...+.|.|.+|.+||+.|+.
T Consensus 94 ~e~~K~l~sQtcEi~e~~pvLpQGCVWHPk~~iL~VLT~~dvSV~~-sV~~d~srVkaDi~~~G~IhCACWT~DG~RLVV 172 (671)
T PF15390_consen 94 TERNKLLMSQTCEIREPFPVLPQGCVWHPKKAILTVLTARDVSVLP-SVHCDSSRVKADIKTSGLIHCACWTKDGQRLVV 172 (671)
T ss_pred cccccceeeeeeeccCCcccCCCcccccCCCceEEEEecCceeEee-eeeeCCceEEEeccCCceEEEEEecCcCCEEEE
Confidence 223322221111 111 23446654433 33344443322 221 12222221234678999999999987655
Q ss_pred EeC-CCcEEEEeCC
Q 010759 355 CSD-DVTAKIWNMK 367 (502)
Q Consensus 355 gs~-dg~i~iwd~~ 367 (502)
+-. .=.-.|||-.
T Consensus 173 AvGSsLHSyiWd~~ 186 (671)
T PF15390_consen 173 AVGSSLHSYIWDSA 186 (671)
T ss_pred EeCCeEEEEEecCc
Confidence 433 3345788753
No 427
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=92.40 E-value=5 Score=32.42 Aligned_cols=120 Identities=17% Similarity=0.110 Sum_probs=72.2
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCc--------eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEE
Q 010759 343 VKWDPTGSLLASCSDDVTAKIWNMKQDK--------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKL 414 (502)
Q Consensus 343 v~~~p~~~~l~sgs~dg~i~iwd~~~~~--------~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~i 414 (502)
-.|......|++++.-|+|.|++..... .+..+ .....|++++-.+-.. ....-.|+.|+ ..+|..
T Consensus 4 GkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~L-Nin~~italaaG~l~~----~~~~D~LliGt-~t~lla 77 (136)
T PF14781_consen 4 GKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFL-NINQEITALAAGRLKP----DDGRDCLLIGT-QTSLLA 77 (136)
T ss_pred EEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEE-ECCCceEEEEEEecCC----CCCcCEEEEec-cceEEE
Confidence 4555566678888888899999765332 12222 2345677775444321 01112455565 457999
Q ss_pred EeCCCCeEEEEeeCCCCCEEEEEECC---CCCEEEEEeCCCcEEEEeCCCCeeEEEEe
Q 010759 415 WDVELGKLLYSLNGHREPVYSLAFSP---TGEYLASGSLDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 415 wd~~~~~~~~~~~~h~~~v~~l~~sp---dg~~lasgs~Dg~i~iw~~~~~~~~~~~~ 469 (502)
||+.....++.-. -.+.|+++.+.. ...-|+..|.+..|.-||....++.++.+
T Consensus 78 YDV~~N~d~Fyke-~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~e~fWtVt 134 (136)
T PF14781_consen 78 YDVENNSDLFYKE-VPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGNEIFWTVT 134 (136)
T ss_pred EEcccCchhhhhh-CccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCcEEEEEec
Confidence 9998777665433 336688887742 22345555557888888877666666544
No 428
>PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length. This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits.
Probab=92.26 E-value=4.7 Score=41.97 Aligned_cols=109 Identities=15% Similarity=0.268 Sum_probs=68.1
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC---
Q 010759 342 CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV--- 417 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~--- 417 (502)
-+.-+..++..+.-+...++.|||.+.+....+-. .....|..+.|...+. .+.+|+ -+....|.++--
T Consensus 34 li~gss~~k~a~V~~~~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d------~qsiLa-VGf~~~v~l~~Q~R~ 106 (631)
T PF12234_consen 34 LISGSSIKKIAVVDSSRSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPD------GQSILA-VGFPHHVLLYTQLRY 106 (631)
T ss_pred eEeecccCcEEEEECCCCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCC------CCEEEE-EEcCcEEEEEEccch
Confidence 34444455554444455679999998876543322 4567899999976443 344555 456778888742
Q ss_pred --CCC----eEEEE--eeCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 418 --ELG----KLLYS--LNGHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 418 --~~~----~~~~~--~~~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
.+. ..+.. +..|+ .+|.+..|.++|.+++.+| +.+.|++-
T Consensus 107 dy~~~~p~w~~i~~i~i~~~T~h~Igds~Wl~~G~LvV~sG--Nqlfv~dk 155 (631)
T PF12234_consen 107 DYTNKGPSWAPIRKIDISSHTPHPIGDSIWLKDGTLVVGSG--NQLFVFDK 155 (631)
T ss_pred hhhcCCcccceeEEEEeecCCCCCccceeEecCCeEEEEeC--CEEEEECC
Confidence 111 22222 33444 5899999999998776554 45888864
No 429
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=91.91 E-value=2.5 Score=41.76 Aligned_cols=148 Identities=16% Similarity=0.174 Sum_probs=83.8
Q ss_pred CCCEE-EEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEE
Q 010759 348 TGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYS 425 (502)
Q Consensus 348 ~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~ 425 (502)
+..+| ..|+.-..+.--|+..|+.+.+...|... -+.|.|..........+. |+ |-.+..|.=.|.+. |..+..
T Consensus 478 dssli~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqt-lv-GlS~~svFrIDPR~~gNKi~v 553 (776)
T COG5167 478 DSSLIYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQT-LV-GLSDYSVFRIDPRARGNKIKV 553 (776)
T ss_pred CcceEEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccce-EE-eecccceEEecccccCCceee
Confidence 34443 34555556666788888888887776654 456777654322222232 33 44455555456553 322222
Q ss_pred eeCCCCCEEEEEECC----CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 426 LNGHREPVYSLAFSP----TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 426 ~~~h~~~v~~l~~sp----dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.. ...-++.-.||. ...|+|.||.-|-|++||.-.-..-..+++- ..|-.+.-+.+|+++.+.+.+ .+-+.|+
T Consensus 554 ~e-sKdY~tKn~Fss~~tTesGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~d~ 631 (776)
T COG5167 554 VE-SKDYKTKNKFSSGMTTESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLTDV 631 (776)
T ss_pred ee-ehhccccccccccccccCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEEec
Confidence 11 122223333433 2458999999999999996533222333443 358899999999976655543 4555554
Q ss_pred e
Q 010759 501 R 501 (502)
Q Consensus 501 ~ 501 (502)
+
T Consensus 632 ~ 632 (776)
T COG5167 632 P 632 (776)
T ss_pred c
Confidence 3
No 430
>COG5167 VID27 Protein involved in vacuole import and degradation [Intracellular trafficking and secretion]
Probab=91.75 E-value=2.4 Score=41.98 Aligned_cols=139 Identities=13% Similarity=0.187 Sum_probs=81.6
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC--------CEEEEEeCCCcEEEEeCCCCc--e-eeeccc
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG--------SLLASCSDDVTAKIWNMKQDK--Y-VHDLRE 377 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--------~~l~sgs~dg~i~iwd~~~~~--~-~~~~~~ 377 (502)
.+..++....++-.|+.-++.+..+.-|... -|.|.|+. +.|+.-|..+..|| |.+-.. . +...+
T Consensus 482 i~~dg~~~~kLykmDIErGkvveeW~~~ddv--vVqy~p~~kf~qmt~eqtlvGlS~~svFrI-DPR~~gNKi~v~esK- 557 (776)
T COG5167 482 IYLDGGERDKLYKMDIERGKVVEEWDLKDDV--VVQYNPYFKFQQMTDEQTLVGLSDYSVFRI-DPRARGNKIKVVESK- 557 (776)
T ss_pred EEecCCCcccceeeecccceeeeEeecCCcc--eeecCCchhHHhcCccceEEeecccceEEe-cccccCCceeeeeeh-
Confidence 3445666677888888888888888776654 46777753 33444444443333 443211 1 11111
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
.-.+.-.|+..+.. ..-++|.||.-|.||+||--.-+....+.+....|-.|..+.+|.+|++.+.. ++.+-
T Consensus 558 --dY~tKn~Fss~~tT-----esGyIa~as~kGDirLyDRig~rAKtalP~lG~aIk~idvta~Gk~ilaTCk~-yllL~ 629 (776)
T COG5167 558 --DYKTKNKFSSGMTT-----ESGYIAAASRKGDIRLYDRIGKRAKTALPGLGDAIKHIDVTANGKHILATCKN-YLLLT 629 (776)
T ss_pred --hccccccccccccc-----cCceEEEecCCCceeeehhhcchhhhcCcccccceeeeEeecCCcEEEEeecc-eEEEE
Confidence 11222233322211 11278999999999999954333334466777889999999999987765533 45555
Q ss_pred eC
Q 010759 458 SL 459 (502)
Q Consensus 458 ~~ 459 (502)
|+
T Consensus 630 d~ 631 (776)
T COG5167 630 DV 631 (776)
T ss_pred ec
Confidence 54
No 431
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=91.60 E-value=22 Score=38.14 Aligned_cols=88 Identities=20% Similarity=0.265 Sum_probs=54.6
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCC-CCCCCCCCCCceEEEEEe-ee--cccccCCCCeEEEEECCC---CCE
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADG-TSNGGAQNGPLNVLVLKH-VK--GRTNEKSKDVTTLDWNGE---GTL 227 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~-~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~V~~l~~s~~---~~~ 227 (502)
-.|+-|.+||+|++||-.|..|.+.+ .+... ...+....+.....+-.. +. -.....+..|..+.|+|. +..
T Consensus 85 f~v~~i~~n~~g~~lal~G~~~v~V~-~LP~r~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~ 163 (717)
T PF10168_consen 85 FEVHQISLNPTGSLLALVGPRGVVVL-ELPRRWGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSH 163 (717)
T ss_pred eeEEEEEECCCCCEEEEEcCCcEEEE-EeccccCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCe
Confidence 36889999999999999988665443 34321 111111122222221111 11 112234567999999986 588
Q ss_pred EEEEECCCcEEEEECC
Q 010759 228 LATGSYDGQARIWSTN 243 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~ 243 (502)
|+.=..|+++|+||..
T Consensus 164 l~vLtsdn~lR~y~~~ 179 (717)
T PF10168_consen 164 LVVLTSDNTLRLYDIS 179 (717)
T ss_pred EEEEecCCEEEEEecC
Confidence 9999999999999975
No 432
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=91.58 E-value=10 Score=40.06 Aligned_cols=99 Identities=15% Similarity=0.195 Sum_probs=68.1
Q ss_pred EEEEEEeCCCeEEEEeCCC-------C-------------eEEEEeeCCCCCEEEEEEC--CCCCEEEEEeCCCcEEEEe
Q 010759 401 LILASASFDSTVKLWDVEL-------G-------------KLLYSLNGHREPVYSLAFS--PTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 401 ~~l~sgs~dg~i~iwd~~~-------~-------------~~~~~~~~h~~~v~~l~~s--pdg~~lasgs~Dg~i~iw~ 458 (502)
-+|+.|..||.|.+|.++. . ++.+.+. ....++.|+++ ...++||+++....|.||-
T Consensus 115 EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~-v~~SaWGLdIh~~~~~rlIAVSsNs~~VTVFa 193 (717)
T PF08728_consen 115 EVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLR-VGASAWGLDIHDYKKSRLIAVSSNSQEVTVFA 193 (717)
T ss_pred eEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEee-cCCceeEEEEEecCcceEEEEecCCceEEEEE
Confidence 4788899999999996521 0 0112222 33578999998 7788888888888888886
Q ss_pred CCC--Cee--EEEEecCCCEEEEEECCCC---C---EEEEEECCCeEEEEEe
Q 010759 459 LKE--GKI--VKTYTGNGGIFEVCWNKEG---D---KIAACFANHTVCVLDF 500 (502)
Q Consensus 459 ~~~--~~~--~~~~~~~~~i~~~~ws~~g---~---~la~~~~~~~v~v~~~ 500 (502)
... .+. .........|.+++|-++. . .|++++-.|.+.+|+|
T Consensus 194 f~l~~~r~~~~~s~~~~hNIP~VSFl~~~~d~~G~v~v~a~dI~G~v~~~~I 245 (717)
T PF08728_consen 194 FALVDERFYHVPSHQHSHNIPNVSFLDDDLDPNGHVKVVATDISGEVWTFKI 245 (717)
T ss_pred EeccccccccccccccccCCCeeEeecCCCCCccceEEEEEeccCcEEEEEE
Confidence 543 111 1122334568888887743 2 7888999999999988
No 433
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=91.37 E-value=1.1 Score=38.63 Aligned_cols=27 Identities=15% Similarity=0.343 Sum_probs=23.6
Q ss_pred CEEEEEECCCC------CEEEEEECCCeEEEEE
Q 010759 473 GIFEVCWNKEG------DKIAACFANHTVCVLD 499 (502)
Q Consensus 473 ~i~~~~ws~~g------~~la~~~~~~~v~v~~ 499 (502)
.+..++|||.| ..||+...++.|.||.
T Consensus 87 ~vv~~aWSP~Gl~~~~rClLavLTs~~~l~l~~ 119 (173)
T PF12657_consen 87 QVVSAAWSPSGLGPNGRCLLAVLTSNGRLSLYG 119 (173)
T ss_pred cEEEEEECCCCCCCCCceEEEEEcCCCeEEEEe
Confidence 57899999976 4899999999999985
No 434
>PRK10115 protease 2; Provisional
Probab=91.13 E-value=24 Score=37.82 Aligned_cols=192 Identities=9% Similarity=0.071 Sum_probs=96.4
Q ss_pred cceeEEEECCCCCEEEEEeC-C----CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 155 SEVCACAWSPAGSLLASGSG-D----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~-D----~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
-.+..+.|||||++||-+.. + ..|++-|+.++...... + ...-..++|++|++.|+
T Consensus 127 ~~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~------------i-------~~~~~~~~w~~D~~~~~ 187 (686)
T PRK10115 127 YTLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPEL------------L-------DNVEPSFVWANDSWTFY 187 (686)
T ss_pred EEEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCcc------------c-------cCcceEEEEeeCCCEEE
Confidence 45778899999998776532 2 35777777655321100 0 00114589999998766
Q ss_pred EEECC------CcEEEEECCCc---eeEeecCCCCCEE-EEEecCCCCEEEEecC---CCeEEEEecc--CcceeEEeee
Q 010759 230 TGSYD------GQARIWSTNGD---LKCTLSKHKGPIF-SLKWNKKGDYLLTGSC---DKTAIVWDVK--TEEWKQQFEF 294 (502)
Q Consensus 230 sg~~d------g~i~iw~~~~~---~~~~~~~h~~~V~-~l~~~~~~~~l~sgs~---D~~v~iwd~~--~~~~~~~~~~ 294 (502)
-...+ ..|+.+++... ....+.......+ .+..+.++.+++..+. ++.+.+|+.. ++.....+..
T Consensus 188 y~~~~~~~~~~~~v~~h~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 267 (686)
T PRK10115 188 YVRKHPVTLLPYQVWRHTIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPR 267 (686)
T ss_pred EEEecCCCCCCCEEEEEECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEEC
Confidence 65443 35666666543 2223333333333 2333447777654433 3568888842 3332222222
Q ss_pred cccCeEEEecCCCceEEEEcC---CCeEEEEEcCCCcceeeecCC-C-cceeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 295 HSGPTLDVDWRNNVSFATSST---DNMIYVCKIGENRPIKTFAGH-Q-GEVNCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~---d~~i~~~~~~~~~~~~~~~~h-~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
..+....+....+..++.... ...|...++........+..+ . ..+..+.+. .+.++++...+|.-+++-+
T Consensus 268 ~~~~~~~~~~~~~~ly~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~-~~~l~~~~~~~g~~~l~~~ 343 (686)
T PRK10115 268 RKDHEYSLDHYQHRFYLRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLF-TDWLVVEERQRGLTSLRQI 343 (686)
T ss_pred CCCCEEEEEeCCCEEEEEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEE-CCEEEEEEEeCCEEEEEEE
Confidence 222222222112223333221 223444444321222333344 3 367778887 4466777777887666544
No 435
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=91.05 E-value=8.4 Score=33.69 Aligned_cols=172 Identities=16% Similarity=0.137 Sum_probs=81.6
Q ss_pred CCCEEEEEeC--CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecc-cccCCCCeEEEEECCCCCEEEEEECCCcEEEEE
Q 010759 165 AGSLLASGSG--DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGR-TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWS 241 (502)
Q Consensus 165 d~~~l~sgs~--D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~ 241 (502)
+|+++.|.|. ...|++|++.+++........+- ..-+. ...-...++.+. -.+|....+|
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~------~~FgEGit~~gd~~y~LT-----------w~egvaf~~d 117 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPD------TVFGEGITKLGDYFYQLT-----------WKEGVAFKYD 117 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCc------cccccceeeccceEEEEE-----------eccceeEEEC
Confidence 5677777773 45799999987754321111000 00000 000011222222 3456667777
Q ss_pred CCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee--cccCe---EEEecCCCceEEEEcCC
Q 010759 242 TNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--HSGPT---LDVDWRNNVSFATSSTD 316 (502)
Q Consensus 242 ~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~~d 316 (502)
...-...--..-.+.-++++. ++..|+.+....+++.-|+.+.....+... ...|+ +.+.|.+...++---..
T Consensus 118 ~~t~~~lg~~~y~GeGWgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~VdG~lyANVw~t 195 (262)
T COG3823 118 ADTLEELGRFSYEGEGWGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWVDGELYANVWQT 195 (262)
T ss_pred hHHhhhhcccccCCcceeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeeeccEEEEeeeee
Confidence 543211111122344466653 455577766666777778776554333221 12222 33445444444433223
Q ss_pred CeEEEEEcCCCcceeee------------cCCCcceeEEEEcCCC-CEEEEE
Q 010759 317 NMIYVCKIGENRPIKTF------------AGHQGEVNCVKWDPTG-SLLASC 355 (502)
Q Consensus 317 ~~i~~~~~~~~~~~~~~------------~~h~~~v~~v~~~p~~-~~l~sg 355 (502)
..|...+..+++.+..+ ..|....+.+++.|++ ++++||
T Consensus 196 ~~I~rI~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTG 247 (262)
T COG3823 196 TRIARIDPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITG 247 (262)
T ss_pred cceEEEcCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEec
Confidence 33333333333333221 1244567889998887 556655
No 436
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=90.79 E-value=4.2 Score=40.49 Aligned_cols=96 Identities=14% Similarity=0.089 Sum_probs=55.6
Q ss_pred CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec
Q 010759 255 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA 334 (502)
Q Consensus 255 ~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 334 (502)
-.|..+..++.|..++-.+.+|.+.++=.+....-..|......+++-.+.-...|.+++
T Consensus 104 feV~~vl~s~~GS~VaL~G~~Gi~vMeLp~rwG~~s~~eDgk~~v~CRt~~i~~~~ftss-------------------- 163 (741)
T KOG4460|consen 104 FEVYQVLLSPTGSHVALIGIKGLMVMELPKRWGKNSEFEDGKSTVNCRTTPVAERFFTSS-------------------- 163 (741)
T ss_pred EEEEEEEecCCCceEEEecCCeeEEEEchhhcCccceecCCCceEEEEeecccceeeccC--------------------
Confidence 357778889999998888889987776433221111222111122222222111111111
Q ss_pred CCCcceeEEEEcCCC---CEEEEEeCCCcEEEEeCCCCce
Q 010759 335 GHQGEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 335 ~h~~~v~~v~~~p~~---~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
..-.+..++|||+. ..+..-+.|.+||+||+.....
T Consensus 164 -~~ltl~Qa~WHP~S~~D~hL~iL~sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 164 -TSLTLKQAAWHPSSILDPHLVLLTSDNVIRIYSLSEPTE 202 (741)
T ss_pred -CceeeeeccccCCccCCceEEEEecCcEEEEEecCCcch
Confidence 11235678999976 5677788899999999875543
No 437
>KOG2377 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.72 E-value=6.3 Score=38.57 Aligned_cols=132 Identities=16% Similarity=0.214 Sum_probs=78.7
Q ss_pred CCCCEEEEEECCCcEEEEECCC---ceeEee-cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE----Eeee
Q 010759 223 GEGTLLATGSYDGQARIWSTNG---DLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ----QFEF 294 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~---~~~~~~-~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~----~~~~ 294 (502)
.|.+..+.+-..|.+.=|-+.+ .....+ ....++|.+++|++|.+.++.--.|++|.+.+....+... +...
T Consensus 31 DDaNkqlfavrSggatgvvvkgpndDVpiSfdm~d~G~I~SIkFSlDnkilAVQR~~~~v~f~nf~~d~~~l~~~~~ck~ 110 (657)
T KOG2377|consen 31 DDANKQLFAVRSGGATGVVVKGPNDDVPISFDMDDKGEIKSIKFSLDNKILAVQRTSKTVDFCNFIPDNSQLEYTQECKT 110 (657)
T ss_pred ccCcceEEEEecCCeeEEEEeCCCCCCCceeeecCCCceeEEEeccCcceEEEEecCceEEEEecCCCchhhHHHHHhcc
Confidence 3444444455556666675433 222233 2346799999999999999999999999999874332221 1122
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcC-CCcceeeecCCCcceeEEEEcCCCCEEEEE
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg 355 (502)
....+....|..+..++.-.+.|. -++... ....++....|...|+=..|.++-+.+.-+
T Consensus 111 k~~~IlGF~W~~s~e~A~i~~~G~-e~y~v~pekrslRlVks~~~nvnWy~yc~et~v~LL~ 171 (657)
T KOG2377|consen 111 KNANILGFCWTSSTEIAFITDQGI-EFYQVLPEKRSLRLVKSHNLNVNWYMYCPETAVILLS 171 (657)
T ss_pred CcceeEEEEEecCeeEEEEecCCe-EEEEEchhhhhhhhhhhcccCccEEEEccccceEeee
Confidence 234477788887776665555443 222222 222334445566667767777776654333
No 438
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=90.38 E-value=1.7 Score=26.83 Aligned_cols=40 Identities=20% Similarity=0.238 Sum_probs=28.7
Q ss_pred CCCCEEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEE
Q 010759 440 PTGEYLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCW 479 (502)
Q Consensus 440 pdg~~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~w 479 (502)
|++++|.++. .+++|.++|+.+++.+..+........++|
T Consensus 1 pd~~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 1 PDGTKLYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred CCCCEEEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 5777666554 578999999999988887765444455555
No 439
>KOG4460 consensus Nuclear pore complex, Nup88/rNup84 component [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=89.98 E-value=16 Score=36.59 Aligned_cols=26 Identities=31% Similarity=0.138 Sum_probs=22.0
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
.|..+..++.|..++-.|-+|.+.++
T Consensus 105 eV~~vl~s~~GS~VaL~G~~Gi~vMe 130 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGIKGLMVME 130 (741)
T ss_pred EEEEEEecCCCceEEEecCCeeEEEE
Confidence 57788899999999999999876665
No 440
>PF08728 CRT10: CRT10; InterPro: IPR014839 CRT10 is a transcriptional regulator of ribonucleotide reductase (RNR) genes []. RNR catalyses the rate limiting step in dNTP synthesis. Mutations in CRT10 have been shown to enhance hydroxyurea resistance [].
Probab=89.71 E-value=14 Score=39.04 Aligned_cols=67 Identities=15% Similarity=0.149 Sum_probs=43.4
Q ss_pred eEEEEEC--CCCCEEEEEECCCcEEEEECCC-------c---ee---------E-eecCCCCCEEEEEec--CCCCEEEE
Q 010759 216 VTTLDWN--GEGTLLATGSYDGQARIWSTNG-------D---LK---------C-TLSKHKGPIFSLKWN--KKGDYLLT 271 (502)
Q Consensus 216 V~~l~~s--~~~~~l~sg~~dg~i~iw~~~~-------~---~~---------~-~~~~h~~~V~~l~~~--~~~~~l~s 271 (502)
|..|... .+...|+.+..||.|.+|.+.. . .. . ........+|+|+++ ...++|++
T Consensus 103 IN~i~v~~lg~~EVLl~c~DdG~V~~Yyt~~I~~~i~~~~~~~~~~~~r~~i~P~f~~~v~~SaWGLdIh~~~~~rlIAV 182 (717)
T PF08728_consen 103 INFIKVGDLGGEEVLLLCTDDGDVLAYYTETIIEAIERFSEDNDSGFSRLKIKPFFHLRVGASAWGLDIHDYKKSRLIAV 182 (717)
T ss_pred eeEEEecccCCeeEEEEEecCCeEEEEEHHHHHHHHHhhccccccccccccCCCCeEeecCCceeEEEEEecCcceEEEE
Confidence 4444333 3567899999999999996421 0 00 0 111234578999998 77777888
Q ss_pred ecCCCeEEEEe
Q 010759 272 GSCDKTAIVWD 282 (502)
Q Consensus 272 gs~D~~v~iwd 282 (502)
++.-..|.||-
T Consensus 183 SsNs~~VTVFa 193 (717)
T PF08728_consen 183 SSNSQEVTVFA 193 (717)
T ss_pred ecCCceEEEEE
Confidence 87777777764
No 441
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=89.57 E-value=0.06 Score=52.33 Aligned_cols=132 Identities=14% Similarity=0.265 Sum_probs=88.3
Q ss_pred EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecC
Q 010759 258 FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 258 ~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 335 (502)
....|.|.+..++.++.+..+..||-. ++...... ..+...+++|. .+..++.+...+.+++|++.....-+.-.+
T Consensus 38 i~~~w~~e~~nlavaca~tiv~~YD~a-gq~~le~n-~tg~aldm~wDkegdvlavlAek~~piylwd~n~eytqqLE~g 115 (615)
T KOG2247|consen 38 IIHRWRPEGHNLAVACANTIVIYYDKA-GQVILELN-PTGKALDMAWDKEGDVLAVLAEKTGPIYLWDVNSEYTQQLESG 115 (615)
T ss_pred ceeeEecCCCceehhhhhhHHHhhhhh-cceecccC-CchhHhhhhhccccchhhhhhhcCCCeeechhhhhhHHHHhcc
Confidence 456788888889999999999999843 22221111 11223344553 344556677888999999876543221112
Q ss_pred CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCC
Q 010759 336 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTG 391 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g 391 (502)
-+..-.-+.|++-+..++.|-..|.+.|++..+.+.+..+-.|...+++++|.+.+
T Consensus 116 g~~s~sll~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd 171 (615)
T KOG2247|consen 116 GTSSKSLLAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLED 171 (615)
T ss_pred CcchHHHHhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEecccc
Confidence 12222227899988889999999999999988776665554588899999998876
No 442
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=89.45 E-value=18 Score=33.74 Aligned_cols=223 Identities=15% Similarity=0.160 Sum_probs=120.0
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECC-----C---ceeEeecC-----CCCCEEEEEecCCCC------------E
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTN-----G---DLKCTLSK-----HKGPIFSLKWNKKGD------------Y 268 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-----~---~~~~~~~~-----h~~~V~~l~~~~~~~------------~ 268 (502)
..-+.|+++|.+.+-++....+...+|+.. + .+..++.. -....+.+.|+.... .
T Consensus 23 ~N~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~~~L~vtiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~~~a~ 102 (336)
T TIGR03118 23 RNAWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQDPLVVVIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGITGPSR 102 (336)
T ss_pred cccceeEecCCCCEEEecCCcceEEeecCCcccccCCccceEEEecCCCCCCCCCCccEEEEeCCCceEEcCCCccccee
Confidence 345788999999988888888999999976 2 12233331 124568888875433 3
Q ss_pred EEEecCCCeEEEEeccCcce---e--EEeeec-ccCeE---EEec--CCCceEEEEcCCCeEEEEEcCCCccee--eecC
Q 010759 269 LLTGSCDKTAIVWDVKTEEW---K--QQFEFH-SGPTL---DVDW--RNNVSFATSSTDNMIYVCKIGENRPIK--TFAG 335 (502)
Q Consensus 269 l~sgs~D~~v~iwd~~~~~~---~--~~~~~~-~~~~~---~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~ 335 (502)
|+.++.||+|.-|...-... . ..+... .+.+. ++.- ..+..+++--..++|-|+|-.-.++.. .|..
T Consensus 103 Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g~F~D 182 (336)
T TIGR03118 103 FLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPGSFID 182 (336)
T ss_pred EEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCCCccC
Confidence 67888999999998532221 1 111111 12221 1111 123334444455666666543221100 0000
Q ss_pred ----------------CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc--cCCCcEEEEEEccCCCCCCCC
Q 010759 336 ----------------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNP 397 (502)
Q Consensus 336 ----------------h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~~~~~i~~~~~sp~g~~~~~~ 397 (502)
..-.|+-..-.++.+.=+.|..-|.|-+||+. +.+++.+. +.-..-+.++..|..-+....
T Consensus 183 P~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~-G~l~~r~as~g~LNaPWG~a~APa~FG~~sg 261 (336)
T TIGR03118 183 PALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLN-GQLLRRVASSGRLNAPWGLAIAPESFGSLSG 261 (336)
T ss_pred CCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCC-CcEEEEeccCCcccCCceeeeChhhhCCCCC
Confidence 00011111112222222334445788899875 55555552 223344666666654332221
Q ss_pred CCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC------CCEEEEEECC
Q 010759 398 NQQLILASASFDSTVKLWDVELGKLLYSLNGHR------EPVYSLAFSP 440 (502)
Q Consensus 398 ~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~sp 440 (502)
.+|+.--.||+|..||..+++.+-.+..-. ...+.|+|..
T Consensus 262 ---~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 262 ---ALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred ---CeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 256655679999999999998777665432 2467888865
No 443
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=89.33 E-value=24 Score=35.01 Aligned_cols=142 Identities=15% Similarity=0.132 Sum_probs=80.3
Q ss_pred CCCEEEEEECCCcEEEEECCCce-----eEeecCCCCCEEEEEecC----CCCEEEEecCCCeEEEEeccC--cc-----
Q 010759 224 EGTLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNK----KGDYLLTGSCDKTAIVWDVKT--EE----- 287 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~~-----~~~~~~h~~~V~~l~~~~----~~~~l~sgs~D~~v~iwd~~~--~~----- 287 (502)
+...+++|+..|.++||+..... ...-..-..||..+..-+ .....++.=.-+.+.+|.+.. +.
T Consensus 36 ~~d~IivGS~~G~LrIy~P~~~~~~~~~lllE~~l~~PILqv~~G~F~s~~~~~~LaVLhP~kl~vY~v~~~~g~~~~g~ 115 (418)
T PF14727_consen 36 GSDKIIVGSYSGILRIYDPSGNEFQPEDLLLETQLKDPILQVECGKFVSGSEDLQLAVLHPRKLSVYSVSLVDGTVEHGN 115 (418)
T ss_pred CccEEEEeccccEEEEEccCCCCCCCccEEEEEecCCcEEEEEeccccCCCCcceEEEecCCEEEEEEEEecCCCcccCc
Confidence 34689999999999999875321 111123456887776432 122233334567777887621 11
Q ss_pred ---eeEEeeeccc----CeEEEecC---CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC
Q 010759 288 ---WKQQFEFHSG----PTLDVDWR---NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 288 ---~~~~~~~~~~----~~~~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~ 357 (502)
....+..+.. ......|. ....+..-+.||.+.+++-+.-.....+.+ ---.-.+.|.+.-..|++++.
T Consensus 116 ~~~L~~~yeh~l~~~a~nm~~G~Fgg~~~~~~IcVQS~DG~L~~feqe~~~f~~~lp~-~llPgPl~Y~~~tDsfvt~ss 194 (418)
T PF14727_consen 116 QYQLELIYEHSLQRTAYNMCCGPFGGVKGRDFICVQSMDGSLSFFEQESFAFSRFLPD-FLLPGPLCYCPRTDSFVTASS 194 (418)
T ss_pred EEEEEEEEEEecccceeEEEEEECCCCCCceEEEEEecCceEEEEeCCcEEEEEEcCC-CCCCcCeEEeecCCEEEEecC
Confidence 1112222111 11112232 134566779999999998765432222222 111234677788888999999
Q ss_pred CCcEEEEeC
Q 010759 358 DVTAKIWNM 366 (502)
Q Consensus 358 dg~i~iwd~ 366 (502)
+..+..|..
T Consensus 195 s~~l~~Yky 203 (418)
T PF14727_consen 195 SWTLECYKY 203 (418)
T ss_pred ceeEEEecH
Confidence 989988864
No 444
>COG3204 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=89.20 E-value=19 Score=33.46 Aligned_cols=117 Identities=15% Similarity=0.239 Sum_probs=80.5
Q ss_pred cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecc-cCeEEEecCCCceEEEE-cCCCeEEEEEcCCCc
Q 010759 251 SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRNNVSFATS-STDNMIYVCKIGENR 328 (502)
Q Consensus 251 ~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~ 328 (502)
.+-+..|.++.|+|+.+.|++......-.+|=...|+++.++.... ...-.+.|..+..|+.+ -.+..+++..+....
T Consensus 82 ~g~~~nvS~LTynp~~rtLFav~n~p~~iVElt~~GdlirtiPL~g~~DpE~Ieyig~n~fvi~dER~~~l~~~~vd~~t 161 (316)
T COG3204 82 LGETANVSSLTYNPDTRTLFAVTNKPAAIVELTKEGDLIRTIPLTGFSDPETIEYIGGNQFVIVDERDRALYLFTVDADT 161 (316)
T ss_pred ccccccccceeeCCCcceEEEecCCCceEEEEecCCceEEEecccccCChhHeEEecCCEEEEEehhcceEEEEEEcCCc
Confidence 3445569999999999999998888888888777888877765332 22334566555555544 567777777665442
Q ss_pred cee----------eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 329 PIK----------TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 329 ~~~----------~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
.+. .....+.....++|.|..+.|..+-+-.-+.||.+.
T Consensus 162 ~~~~~~~~~i~L~~~~k~N~GfEGlA~d~~~~~l~~aKEr~P~~I~~~~ 210 (316)
T COG3204 162 TVISAKVQKIPLGTTNKKNKGFEGLAWDPVDHRLFVAKERNPIGIFEVT 210 (316)
T ss_pred cEEeccceEEeccccCCCCcCceeeecCCCCceEEEEEccCCcEEEEEe
Confidence 211 111124457789999999888888888888887665
No 445
>PHA02790 Kelch-like protein; Provisional
Probab=89.11 E-value=29 Score=35.51 Aligned_cols=141 Identities=9% Similarity=0.010 Sum_probs=63.0
Q ss_pred CCCEEEEEECCC-----cEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEecCC--CeEEEEeccCcceeEEee
Q 010759 224 EGTLLATGSYDG-----QARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 224 ~~~~l~sg~~dg-----~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~D--~~v~iwd~~~~~~~~~~~ 293 (502)
++.+++.||.++ .+..||.....-..+.. .... .+++ .-++...+.|+.+ .++..||+.+..|...-.
T Consensus 271 ~~~lyviGG~~~~~~~~~v~~Ydp~~~~W~~~~~m~~~r~~-~~~v-~~~~~iYviGG~~~~~sve~ydp~~n~W~~~~~ 348 (480)
T PHA02790 271 GEVVYLIGGWMNNEIHNNAIAVNYISNNWIPIPPMNSPRLY-ASGV-PANNKLYVVGGLPNPTSVERWFHGDAAWVNMPS 348 (480)
T ss_pred CCEEEEEcCCCCCCcCCeEEEEECCCCEEEECCCCCchhhc-ceEE-EECCEEEEECCcCCCCceEEEECCCCeEEECCC
Confidence 345666776543 45566654432222111 1111 1122 1245555666653 468889988877754322
Q ss_pred ecccC-eEEEecCCCceEEEEcCCC---eEEEEEcCCCcce--eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 294 FHSGP-TLDVDWRNNVSFATSSTDN---MIYVCKIGENRPI--KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 294 ~~~~~-~~~~~~~~~~~~~~~~~d~---~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
..... -......++..++.|+.++ .+..|+..++.=. ..+.-..... +++ .-++++.+.|+ .+.+||..
T Consensus 349 l~~~r~~~~~~~~~g~IYviGG~~~~~~~ve~ydp~~~~W~~~~~m~~~r~~~-~~~-~~~~~IYv~GG---~~e~ydp~ 423 (480)
T PHA02790 349 LLKPRCNPAVASINNVIYVIGGHSETDTTTEYLLPNHDQWQFGPSTYYPHYKS-CAL-VFGRRLFLVGR---NAEFYCES 423 (480)
T ss_pred CCCCCcccEEEEECCEEEEecCcCCCCccEEEEeCCCCEEEeCCCCCCccccc-eEE-EECCEEEEECC---ceEEecCC
Confidence 21111 1122223455556555432 3445554432110 0000001111 121 23566666664 46778877
Q ss_pred CCce
Q 010759 368 QDKY 371 (502)
Q Consensus 368 ~~~~ 371 (502)
+++.
T Consensus 424 ~~~W 427 (480)
T PHA02790 424 SNTW 427 (480)
T ss_pred CCcE
Confidence 6544
No 446
>PF12657 TFIIIC_delta: Transcription factor IIIC subunit delta N-term; InterPro: IPR024761 This entry represents a domain found towards the N terminus of the 90 kDa subunit of transcription factor IIIC (also known as subunit 9 in yeast []). The whole subunit is involved in RNA polymerase III-mediated transcription. It is possible that this N-terminal domain interacts with TFIIIC subunit 8 [].
Probab=88.78 E-value=3.7 Score=35.31 Aligned_cols=36 Identities=28% Similarity=0.577 Sum_probs=29.2
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
.+..++|||.|.+ ++...+|+.-..+|.|.||....
T Consensus 87 ~vv~~aWSP~Gl~---~~~rClLavLTs~~~l~l~~~~~ 122 (173)
T PF12657_consen 87 QVVSAAWSPSGLG---PNGRCLLAVLTSNGRLSLYGPPG 122 (173)
T ss_pred cEEEEEECCCCCC---CCCceEEEEEcCCCeEEEEecCC
Confidence 6788999998864 34567899999999999997653
No 447
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=88.74 E-value=34 Score=35.93 Aligned_cols=69 Identities=20% Similarity=0.341 Sum_probs=43.9
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCc
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 236 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~ 236 (502)
++++.-+|.|+.+++|+.||.|++|++....... + + ....|-..+.|...| |+++..|+.
T Consensus 17 ~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qsk------i--~----------~~~~p~~nlv~tnhg--l~~~tsdrr 76 (1636)
T KOG3616|consen 17 TTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSK------I--C----------EEAKPKENLVFTNHG--LVTATSDRR 76 (1636)
T ss_pred eeeeeecCCCceEEEEecCCcEEEEeecccchhh------h--h----------hhcCCccceeeeccc--eEEEeccch
Confidence 6677888999999999999999999975432100 0 0 001222334444444 456667777
Q ss_pred EEEEECCCc
Q 010759 237 ARIWSTNGD 245 (502)
Q Consensus 237 i~iw~~~~~ 245 (502)
+.-|..++-
T Consensus 77 ~la~~~dgv 85 (1636)
T KOG3616|consen 77 ALAWKEDGV 85 (1636)
T ss_pred hheeeccCc
Confidence 778876653
No 448
>TIGR03118 PEPCTERM_chp_1 conserved hypothetical protein TIGR03118. This model describes and uncharacterized conserved hypothetical protein. Members are found with the C-terminal putative exosortase interaction domain, PEP-CTERM, in Nitrosospira multiformis, Rhodoferax ferrireducens, Solibacter usitatus Ellin6076, and Acidobacteria bacterium Ellin345. It is found without the PEP-CTERM domain in several other species, including Burkholderia ambifaria, Gloeobacter violaceus PCC 7421, and three copies in the Acanthamoeba polyphaga mimivirus.
Probab=88.52 E-value=21 Score=33.32 Aligned_cols=226 Identities=16% Similarity=0.225 Sum_probs=118.9
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeeccc-ccCCCCeEEEEECCCCC---------
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT-NEKSKDVTTLDWNGEGT--------- 226 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~l~~s~~~~--------- 226 (502)
-..|+|+|.+.+.++...-++..+||.......... .++.+ .+.... .......+.+.|+....
T Consensus 25 ~WGia~~p~~~~WVadngT~~~TlYdg~~~~~~g~~--~~L~v----tiP~~~~~~~~~~PTGiVfN~~~~F~vt~~g~~ 98 (336)
T TIGR03118 25 AWGLSYRPGGPFWVANTGTGTATLYVGNPDTQPLVQ--DPLVV----VIPAPPPLAAEGTPTGQVFNGSDTFVVSGEGIT 98 (336)
T ss_pred cceeEecCCCCEEEecCCcceEEeecCCcccccCCc--cceEE----EecCCCCCCCCCCccEEEEeCCCceEEcCCCcc
Confidence 357999999999999888899999997632211111 11111 111100 01123456666664322
Q ss_pred ---EEEEEECCCcEEEEECCCcee------EeecC-CCCCEE-EEEecC--CCCEEEEe-cCCCeEEEEeccCccee--E
Q 010759 227 ---LLATGSYDGQARIWSTNGDLK------CTLSK-HKGPIF-SLKWNK--KGDYLLTG-SCDKTAIVWDVKTEEWK--Q 290 (502)
Q Consensus 227 ---~l~sg~~dg~i~iw~~~~~~~------~~~~~-h~~~V~-~l~~~~--~~~~l~sg-s~D~~v~iwd~~~~~~~--~ 290 (502)
.++.++.||+|.-|...-... ..+.. ..+.|+ .+++.. .+++|+.+ -..++|.++|-.=.... .
T Consensus 99 ~~a~Fif~tEdGTisaW~p~v~~t~~~~~~~~~d~s~~gavYkGLAi~~~~~~~~LYaadF~~g~IDVFd~~f~~~~~~g 178 (336)
T TIGR03118 99 GPSRFLFVTEDGTLSGWAPALGTTRMTRAEIVVDASQQGNVYKGLAVGPTGGGDYLYAANFRQGRIDVFKGSFRPPPLPG 178 (336)
T ss_pred cceeEEEEeCCceEEeecCcCCcccccccEEEEccCCCcceeeeeEEeecCCCceEEEeccCCCceEEecCccccccCCC
Confidence 367789999999998532111 22222 235553 455543 35666554 34688888874321110 0
Q ss_pred EeeecccC----eEEEecCCCceEEE-------------EcCCCeEEEEEcCCCcceeeec--CCCcceeEEEEcC----
Q 010759 291 QFEFHSGP----TLDVDWRNNVSFAT-------------SSTDNMIYVCKIGENRPIKTFA--GHQGEVNCVKWDP---- 347 (502)
Q Consensus 291 ~~~~~~~~----~~~~~~~~~~~~~~-------------~~~d~~i~~~~~~~~~~~~~~~--~h~~~v~~v~~~p---- 347 (502)
.|....-| ...+.-.....+++ +..-+.|-+++.... .++.+. +.-..-+.|+..|
T Consensus 179 ~F~DP~iPagyAPFnIqnig~~lyVtYA~qd~~~~d~v~G~G~G~VdvFd~~G~-l~~r~as~g~LNaPWG~a~APa~FG 257 (336)
T TIGR03118 179 SFIDPALPAGYAPFNVQNLGGTLYVTYAQQDADRNDEVAGAGLGYVNVFTLNGQ-LLRRVASSGRLNAPWGLAIAPESFG 257 (336)
T ss_pred CccCCCCCCCCCCcceEEECCeEEEEEEecCCcccccccCCCcceEEEEcCCCc-EEEEeccCCcccCCceeeeChhhhC
Confidence 00000000 00010011111221 223356666666433 334342 2234455666644
Q ss_pred --CCCEEEEEeCCCcEEEEeCCCCceeeecccCCC------cEEEEEEcc
Q 010759 348 --TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK------EIYTIRWSP 389 (502)
Q Consensus 348 --~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~------~i~~~~~sp 389 (502)
.|.+|+.---||+|..||..+++.+..+....+ .++.|.|..
T Consensus 258 ~~sg~lLVGNFGDG~InaFD~~sG~~~g~L~~~~G~pi~i~GLWgL~fGn 307 (336)
T TIGR03118 258 SLSGALLVGNFGDGTINAYDPQSGAQLGQLLDPDNHPVKVDGLWSLTFGN 307 (336)
T ss_pred CCCCCeEEeecCCceeEEecCCCCceeeeecCCCCCeEEecCeEEeeeCC
Confidence 567888777899999999999988877765433 245566644
No 449
>KOG2280 consensus Vacuolar assembly/sorting protein VPS16 [Intracellular trafficking, secretion, and vesicular transport]
Probab=88.03 E-value=36 Score=35.85 Aligned_cols=185 Identities=11% Similarity=0.199 Sum_probs=89.7
Q ss_pred CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceee---ecCCCcceeEEEEcCCCCE
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT---FAGHQGEVNCVKWDPTGSL 351 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~ 351 (502)
--.|+|++.. |.....+....+++..+.|..+..++.-..+|+++++++-....-.. +......|..+.+..+|-.
T Consensus 63 ~~~I~If~~s-G~lL~~~~w~~~~lI~mgWs~~eeLI~v~k~g~v~Vy~~~ge~ie~~svg~e~~~~~I~ec~~f~~GVa 141 (829)
T KOG2280|consen 63 RPYIRIFNIS-GQLLGRILWKHGELIGMGWSDDEELICVQKDGTVHVYGLLGEFIESNSVGFESQMSDIVECRFFHNGVA 141 (829)
T ss_pred ceeEEEEecc-ccchHHHHhcCCCeeeecccCCceEEEEeccceEEEeecchhhhcccccccccccCceeEEEEecCceE
Confidence 3467788763 44344333334478889999999999999999999998754321110 1111223444444445544
Q ss_pred EEEEeCCCcEEEEeCCCCceeeeccc-CCCcEEEEEEc--cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-EEEEee
Q 010759 352 LASCSDDVTAKIWNMKQDKYVHDLRE-HSKEIYTIRWS--PTGSGTNNPNQQLILASASFDSTVKLWDVELGK-LLYSLN 427 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~~~~~~~~~-~~~~i~~~~~s--p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-~~~~~~ 427 (502)
+.+ .+|.+.+-.-........+.. ........+|. +.+.. ...+|...-..+ ..+.-...+. ....+.
T Consensus 142 vlt--~~g~v~~i~~~~~~~~~~~~diP~~~~~~~~Wt~~~~~~~-----~~~ll~v~~~v~-~~~~q~~~~~~q~~~~~ 213 (829)
T KOG2280|consen 142 VLT--VSGQVILINGVEEPKLRKMPDIPYNELPKSCWTVFQPHRQ-----STILLDVDVAVG-LHICQVEESRVQLHALS 213 (829)
T ss_pred EEe--cCCcEEEEcCCCcchhhhCCCCCCccCCCcceeEecCCCc-----ceeEEeechhhh-hcccceecccccccccC
Confidence 433 345544432211111222221 11111112222 11110 001111110000 0111111110 111111
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.-...+..++.||++++||--...|.|.+-+....+.+..+
T Consensus 214 ~~~~~~~ki~VS~n~~~laLyt~~G~i~~vs~D~~~~lce~ 254 (829)
T KOG2280|consen 214 WPNSSVVKISVSPNRRFLALYTETGKIWVVSIDLSQILCEF 254 (829)
T ss_pred CCCceEEEEEEcCCcceEEEEecCCcEEEEecchhhhhhcc
Confidence 12245788999999999999999999998887765554444
No 450
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=87.64 E-value=2 Score=26.18 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=19.1
Q ss_pred CCCEEEEEECCCCCEEEEEECC---CeEEEE
Q 010759 471 NGGIFEVCWNKEGDKIAACFAN---HTVCVL 498 (502)
Q Consensus 471 ~~~i~~~~ws~~g~~la~~~~~---~~v~v~ 498 (502)
.+.-...+|||||++|+.++.. |.-.||
T Consensus 8 ~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 8 PGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp SSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred CccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 3456789999999999977653 444444
No 451
>PF14269 Arylsulfotran_2: Arylsulfotransferase (ASST)
Probab=87.09 E-value=7.6 Score=36.76 Aligned_cols=91 Identities=20% Similarity=0.337 Sum_probs=0.0
Q ss_pred CCeEEEEeCCCCeEEEEee---------------------------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 409 DSTVKLWDVELGKLLYSLN---------------------------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~---------------------------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
|+.+.-.|+.+++.+++.. ..--.|++|...++|.||+|+-.-.+|.+.+..+
T Consensus 95 d~~~~EiDi~TgevlfeW~a~DH~~~~~~~~~~~~~~~~g~~~~~~~D~~HiNsV~~~~~G~yLiS~R~~~~i~~I~~~t 174 (299)
T PF14269_consen 95 DDVFQEIDIETGEVLFEWSASDHVDPNDSYDSQDPLPGSGGSSSFPWDYFHINSVDKDDDGDYLISSRNTSTIYKIDPST 174 (299)
T ss_pred cceeEEeccCCCCEEEEEEhhheecccccccccccccCCCcCCCCCCCccEeeeeeecCCccEEEEecccCEEEEEECCC
Q ss_pred CeeEEEEecC-CCEEE-----EEECCCCCEEEEEECCCeEEEEE
Q 010759 462 GKIVKTYTGN-GGIFE-----VCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 462 ~~~~~~~~~~-~~i~~-----~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
|+++..+.+. ..-+. ++|..+-+.+-....+++|.|||
T Consensus 175 G~I~W~lgG~~~~df~~~~~~f~~QHdar~~~~~~~~~~IslFD 218 (299)
T PF14269_consen 175 GKIIWRLGGKRNSDFTLPATNFSWQHDARFLNESNDDGTISLFD 218 (299)
T ss_pred CcEEEEeCCCCCCcccccCCcEeeccCCEEeccCCCCCEEEEEc
No 452
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=86.81 E-value=6.9 Score=35.10 Aligned_cols=70 Identities=16% Similarity=0.207 Sum_probs=50.9
Q ss_pred ECCCCCEEEEEECCCcEEEEECCCceeE--------eec-------CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNGDLKC--------TLS-------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~~~~~--------~~~-------~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~ 285 (502)
+...+.+|+.-..+|.+++||+...... .+. .....|..+.++.+|.-+++-+ +|..+.|+..-
T Consensus 18 l~~~~~~Ll~iT~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~PiV~ls-ng~~y~y~~~L 96 (219)
T PF07569_consen 18 LECNGSYLLAITSSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGVPIVTLS-NGDSYSYSPDL 96 (219)
T ss_pred EEeCCCEEEEEeCCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCCEEEEEe-CCCEEEecccc
Confidence 3456788999999999999998653221 112 3556788888998887776654 57889999887
Q ss_pred cceeEE
Q 010759 286 EEWKQQ 291 (502)
Q Consensus 286 ~~~~~~ 291 (502)
+.|+..
T Consensus 97 ~~W~~v 102 (219)
T PF07569_consen 97 GCWIRV 102 (219)
T ss_pred ceeEEe
Confidence 777654
No 453
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=86.80 E-value=12 Score=39.45 Aligned_cols=59 Identities=22% Similarity=0.396 Sum_probs=36.8
Q ss_pred EEEECCCCCEEEEEECC----CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCC
Q 010759 218 TLDWNGEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK 276 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~ 276 (502)
.+.|-.|..|++.+... +.+|+|..+|.+-..-...++.-..+.|-|+|..++|-..||
T Consensus 206 ~i~wrgD~~y~~v~r~Ee~prra~rvysreg~lds~sep~~g~e~~LSWkpqgS~~ati~td~ 268 (1243)
T COG5290 206 IIFWRGDTEYNLVGRSEERPRRAFRVYSREGQLDSASEPVTGMEHQLSWKPQGSKYATIGTDG 268 (1243)
T ss_pred EEEEccCcceeeecchhcccccceeeeccccccccccCCcccchhccccccCCceeeeeccCC
Confidence 45677777777776543 356677655543322222333335588999999999876554
No 454
>PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide. WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A ....
Probab=86.72 E-value=3.7 Score=24.96 Aligned_cols=31 Identities=29% Similarity=0.354 Sum_probs=19.9
Q ss_pred eCCCCCEEEEEECCCCCEEEEEe-CC--CcEEEE
Q 010759 427 NGHREPVYSLAFSPTGEYLASGS-LD--KSMHIW 457 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs-~D--g~i~iw 457 (502)
..........+|||||++|+-++ .+ |.-.||
T Consensus 5 t~~~~~~~~p~~SpDGk~i~f~s~~~~~g~~diy 38 (39)
T PF07676_consen 5 TNSPGDDGSPAWSPDGKYIYFTSNRNDRGSFDIY 38 (39)
T ss_dssp S-SSSSEEEEEE-TTSSEEEEEEECT--SSEEEE
T ss_pred ccCCccccCEEEecCCCEEEEEecCCCCCCcCEE
Confidence 33445678899999999887544 45 665555
No 455
>KOG1898 consensus Splicing factor 3b, subunit 3 [RNA processing and modification]
Probab=85.92 E-value=60 Score=35.72 Aligned_cols=31 Identities=26% Similarity=0.313 Sum_probs=26.3
Q ss_pred ccceeEEEECCCC------CEEEEEeCCCcEEEEecC
Q 010759 154 TSEVCACAWSPAG------SLLASGSGDSTARIWTIA 184 (502)
Q Consensus 154 ~~~V~~~~~spd~------~~l~sgs~D~~i~iW~~~ 184 (502)
...|.|+++.++. ++++.|+.|+.+++..+.
T Consensus 582 ~~~vac~ai~~~~~g~krsrfla~a~~d~~vriisL~ 618 (1205)
T KOG1898|consen 582 STDVACLAIGQDPEGEKRSRFLALASVDNMVRIISLD 618 (1205)
T ss_pred ceeehhhccCCCCcchhhcceeeeeccccceeEEEec
Confidence 4568899998875 479999999999999876
No 456
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=85.20 E-value=47 Score=33.89 Aligned_cols=116 Identities=18% Similarity=0.211 Sum_probs=58.7
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc---EEEEEEccCCCCCCCCCCcEEEEEEeC-----------
Q 010759 343 VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE---IYTIRWSPTGSGTNNPNQQLILASASF----------- 408 (502)
Q Consensus 343 v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~---i~~~~~sp~g~~~~~~~~~~~l~sgs~----------- 408 (502)
+..-++|.+++..+ ..+..+|+- |+.+......... -+.+..-|+|. +|+.+..
T Consensus 153 ~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~l~~~~~~~HHD~~~l~nGn---------~L~l~~~~~~~~~~~~~~ 220 (477)
T PF05935_consen 153 FKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYDLPGGYYDFHHDIDELPNGN---------LLILASETKYVDEDKDVD 220 (477)
T ss_dssp EEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE--TTEE-B-S-EEE-TTS----------EEEEEEETTEE-TS-EE-
T ss_pred eeEcCCCCEEEecC--CceEEEcCC-CCEEEeeecCCcccccccccEECCCCC---------EEEEEeecccccCCCCcc
Confidence 55678888887665 678888875 4444333221111 12344556653 3333330
Q ss_pred --CCeEEEEeCCCCeEEEEee--CCC-------------------------CCEEEEEECC-CCCEEEEEeCCCcEEEEe
Q 010759 409 --DSTVKLWDVELGKLLYSLN--GHR-------------------------EPVYSLAFSP-TGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 409 --dg~i~iwd~~~~~~~~~~~--~h~-------------------------~~v~~l~~sp-dg~~lasgs~Dg~i~iw~ 458 (502)
.-.|..+| .+|+.+..+. .|- -.+++|.+.| ++.+|+|+-.-..|...|
T Consensus 221 ~~~D~Ivevd-~tG~vv~~wd~~d~ld~~~~~~~~~~~~~~~~~~~~~~DW~H~Nsi~yd~~dd~iivSsR~~s~V~~Id 299 (477)
T PF05935_consen 221 TVEDVIVEVD-PTGEVVWEWDFFDHLDPYRDTVLKPYPYGDISGSGGGRDWLHINSIDYDPSDDSIIVSSRHQSAVIKID 299 (477)
T ss_dssp --S-EEEEE--TTS-EEEEEEGGGTS-TT--TTGGT--SSSSS-SSTTSBS--EEEEEEETTTTEEEEEETTT-EEEEEE
T ss_pred EecCEEEEEC-CCCCEEEEEehHHhCCcccccccccccccccccCCCCCCccccCccEEeCCCCeEEEEcCcceEEEEEE
Confidence 22355566 6777665532 110 2489999998 566666666666899999
Q ss_pred CCCCeeEEEEecC
Q 010759 459 LKEGKIVKTYTGN 471 (502)
Q Consensus 459 ~~~~~~~~~~~~~ 471 (502)
.+++++...+..+
T Consensus 300 ~~t~~i~Wilg~~ 312 (477)
T PF05935_consen 300 YRTGKIKWILGPP 312 (477)
T ss_dssp -TTS-EEEEES-S
T ss_pred CCCCcEEEEeCCC
Confidence 9999988777543
No 457
>PRK13684 Ycf48-like protein; Provisional
Probab=84.85 E-value=39 Score=32.62 Aligned_cols=150 Identities=9% Similarity=0.074 Sum_probs=78.9
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceee-ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
.+.+..+....+..++..+..+.++.-.......-.. ..+-...+.++.+.+++++++.| ..|.+++=....+..-..
T Consensus 172 ~g~~~~i~~~~~g~~v~~g~~G~i~~s~~~gg~tW~~~~~~~~~~l~~i~~~~~g~~~~vg-~~G~~~~~s~d~G~sW~~ 250 (334)
T PRK13684 172 AGVVRNLRRSPDGKYVAVSSRGNFYSTWEPGQTAWTPHQRNSSRRLQSMGFQPDGNLWMLA-RGGQIRFNDPDDLESWSK 250 (334)
T ss_pred cceEEEEEECCCCeEEEEeCCceEEEEcCCCCCeEEEeeCCCcccceeeeEcCCCCEEEEe-cCCEEEEccCCCCCcccc
Confidence 3445566665555666666666665431111111111 12234578899999999887665 457665422333321111
Q ss_pred ccc----CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe---eCCCCCEEEEEECCCCCEEEE
Q 010759 375 LRE----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL---NGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 375 ~~~----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---~~h~~~v~~l~~spdg~~las 447 (502)
... ....++.+.+.|++. +++ ++.+|.|.. ....++.-..+ .+-....+.+.|..+++.++
T Consensus 251 ~~~~~~~~~~~l~~v~~~~~~~---------~~~-~G~~G~v~~-S~d~G~tW~~~~~~~~~~~~~~~~~~~~~~~~~~- 318 (334)
T PRK13684 251 PIIPEITNGYGYLDLAYRTPGE---------IWA-GGGNGTLLV-SKDGGKTWEKDPVGEEVPSNFYKIVFLDPEKGFV- 318 (334)
T ss_pred ccCCccccccceeeEEEcCCCC---------EEE-EcCCCeEEE-eCCCCCCCeECCcCCCCCcceEEEEEeCCCceEE-
Confidence 111 123467788877654 344 445675543 33333332222 12223578888877766655
Q ss_pred EeCCCcEEEEe
Q 010759 448 GSLDKSMHIWS 458 (502)
Q Consensus 448 gs~Dg~i~iw~ 458 (502)
.+..|.|.-|+
T Consensus 319 ~G~~G~il~~~ 329 (334)
T PRK13684 319 LGQRGVLLRYV 329 (334)
T ss_pred ECCCceEEEec
Confidence 55577777665
No 458
>COG3823 Glutamine cyclotransferase [Posttranslational modification, protein turnover, chaperones]
Probab=84.64 E-value=27 Score=30.68 Aligned_cols=172 Identities=12% Similarity=0.162 Sum_probs=79.6
Q ss_pred CCCEEEEecCC--CeEEEEeccCcceeEEeeecccCeE--EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce
Q 010759 265 KGDYLLTGSCD--KTAIVWDVKTEEWKQQFEFHSGPTL--DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV 340 (502)
Q Consensus 265 ~~~~l~sgs~D--~~v~iwd~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v 340 (502)
+|+++.+.+.- ..|++||+.+++....-......+. .+.-..+..+...-.++..+.+|..+-+.+..+. ..+.=
T Consensus 55 ~g~i~esTG~yg~S~ir~~~L~~gq~~~s~~l~~~~~FgEGit~~gd~~y~LTw~egvaf~~d~~t~~~lg~~~-y~GeG 133 (262)
T COG3823 55 DGHILESTGLYGFSKIRVSDLTTGQEIFSEKLAPDTVFGEGITKLGDYFYQLTWKEGVAFKYDADTLEELGRFS-YEGEG 133 (262)
T ss_pred CCEEEEeccccccceeEEEeccCceEEEEeecCCccccccceeeccceEEEEEeccceeEEEChHHhhhhcccc-cCCcc
Confidence 34556665543 4699999998876543332211110 0111122333444455566666665544443332 22333
Q ss_pred eEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc--CCCcE---EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 341 NCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE--HSKEI---YTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--~~~~i---~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
+.++. |+.-|+.+....+++.-|.++-....++.. ...+| .-+.|- +| .+.|---.+..|...
T Consensus 134 WgLt~--d~~~LimsdGsatL~frdP~tfa~~~~v~VT~~g~pv~~LNELE~V-dG---------~lyANVw~t~~I~rI 201 (262)
T COG3823 134 WGLTS--DDKNLIMSDGSATLQFRDPKTFAELDTVQVTDDGVPVSKLNELEWV-DG---------ELYANVWQTTRIARI 201 (262)
T ss_pred eeeec--CCcceEeeCCceEEEecCHHHhhhcceEEEEECCeecccccceeee-cc---------EEEEeeeeecceEEE
Confidence 44443 455555555555666656543322221111 01111 112221 11 122222223344445
Q ss_pred eCCCCeEEEEee------------CCCCCEEEEEECCCC-CEEEEEe
Q 010759 416 DVELGKLLYSLN------------GHREPVYSLAFSPTG-EYLASGS 449 (502)
Q Consensus 416 d~~~~~~~~~~~------------~h~~~v~~l~~spdg-~~lasgs 449 (502)
+..+|+.+..+. .|....+.|++-|++ ++++||-
T Consensus 202 ~p~sGrV~~widlS~L~~~~~~~~~~~nvlNGIA~~~~~~r~~iTGK 248 (262)
T COG3823 202 DPDSGRVVAWIDLSGLLKELNLDKSNDNVLNGIAHDPQQDRFLITGK 248 (262)
T ss_pred cCCCCcEEEEEEccCCchhcCccccccccccceeecCcCCeEEEecC
Confidence 666666654432 244567889999987 6666653
No 459
>PRK10115 protease 2; Provisional
Probab=84.43 E-value=63 Score=34.74 Aligned_cols=235 Identities=7% Similarity=0.043 Sum_probs=109.8
Q ss_pred CeEEEEECCCCCEEEEEECC-----CcEEEEECCCce--eEeecCCCCCEEEEEecCCCCEEEEecCC------CeEEEE
Q 010759 215 DVTTLDWNGEGTLLATGSYD-----GQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDYLLTGSCD------KTAIVW 281 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~d-----g~i~iw~~~~~~--~~~~~~h~~~V~~l~~~~~~~~l~sgs~D------~~v~iw 281 (502)
.+..+.|||+|++|+-+... ..|++-++.+.. ...+.+ .-..++|.++++.|+-...+ ..|+.+
T Consensus 128 ~l~~~~~Spdg~~la~~~d~~G~E~~~l~v~d~~tg~~l~~~i~~---~~~~~~w~~D~~~~~y~~~~~~~~~~~~v~~h 204 (686)
T PRK10115 128 TLGGMAITPDNTIMALAEDFLSRRQYGIRFRNLETGNWYPELLDN---VEPSFVWANDSWTFYYVRKHPVTLLPYQVWRH 204 (686)
T ss_pred EEeEEEECCCCCEEEEEecCCCcEEEEEEEEECCCCCCCCccccC---cceEEEEeeCCCEEEEEEecCCCCCCCEEEEE
Confidence 46678899999988865332 256677765332 112221 11569999999876654432 367778
Q ss_pred eccCc--ceeEEeeecccCeE-EEecC-CCc-eEEEE--cCCCeEEEEEcC--CCcceeeecCCCcceeEEEEcCCCCEE
Q 010759 282 DVKTE--EWKQQFEFHSGPTL-DVDWR-NNV-SFATS--STDNMIYVCKIG--ENRPIKTFAGHQGEVNCVKWDPTGSLL 352 (502)
Q Consensus 282 d~~~~--~~~~~~~~~~~~~~-~~~~~-~~~-~~~~~--~~d~~i~~~~~~--~~~~~~~~~~h~~~v~~v~~~p~~~~l 352 (502)
++.++ +-...+........ ..... +.. .++.+ ..++.+++++.. ...+...+..-.+....+. +..+.++
T Consensus 205 ~lgt~~~~d~lv~~e~~~~~~~~~~~s~d~~~l~i~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ly 283 (686)
T PRK10115 205 TIGTPASQDELVYEEKDDTFYVSLHKTTSKHYVVIHLASATTSEVLLLDAELADAEPFVFLPRRKDHEYSLD-HYQHRFY 283 (686)
T ss_pred ECCCChhHCeEEEeeCCCCEEEEEEEcCCCCEEEEEEECCccccEEEEECcCCCCCceEEEECCCCCEEEEE-eCCCEEE
Confidence 88777 33333332222221 11112 222 23222 334567777742 2222211211111112222 2223333
Q ss_pred EEEeCC-CcEEEE--eCCCCceeeecccC-C-CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEe
Q 010759 353 ASCSDD-VTAKIW--NMKQDKYVHDLREH-S-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSL 426 (502)
Q Consensus 353 ~sgs~d-g~i~iw--d~~~~~~~~~~~~~-~-~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~ 426 (502)
+....+ ...+|. ++........+..+ . ..+..+.+..+ .++++...+|.-+++-+.. +..+..+
T Consensus 284 ~~tn~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~----------~l~~~~~~~g~~~l~~~~~~~~~~~~l 353 (686)
T PRK10115 284 LRSNRHGKNFGLYRTRVRDEQQWEELIPPRENIMLEGFTLFTD----------WLVVEERQRGLTSLRQINRKTREVIGI 353 (686)
T ss_pred EEEcCCCCCceEEEecCCCcccCeEEECCCCCCEEEEEEEECC----------EEEEEEEeCCEEEEEEEcCCCCceEEe
Confidence 322221 223333 33311111223333 2 35666666522 3667777777766554332 2233443
Q ss_pred e-CCCCCEEEEEEC--CCC-CEEEEEeC---CCcEEEEeCCCCe
Q 010759 427 N-GHREPVYSLAFS--PTG-EYLASGSL---DKSMHIWSLKEGK 463 (502)
Q Consensus 427 ~-~h~~~v~~l~~s--pdg-~~lasgs~---Dg~i~iw~~~~~~ 463 (502)
. .....+..+.++ +++ .++++.+. -+.+..+|..+++
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~y~~d~~~~~ 397 (686)
T PRK10115 354 AFDDPAYVTWIAYNPEPETSRLRYGYSSMTTPDTLFELDMDTGE 397 (686)
T ss_pred cCCCCceEeeecccCCCCCceEEEEEecCCCCCEEEEEECCCCc
Confidence 3 222223334455 343 45544433 3678888887765
No 460
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=83.60 E-value=5.8 Score=41.33 Aligned_cols=72 Identities=19% Similarity=0.205 Sum_probs=44.0
Q ss_pred CCCCEEEEEECCCcEEEEECCC-----cee-Ee----------ecC-----------CCCCEEEEEecC----CCCEEEE
Q 010759 223 GEGTLLATGSYDGQARIWSTNG-----DLK-CT----------LSK-----------HKGPIFSLKWNK----KGDYLLT 271 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~-----~~~-~~----------~~~-----------h~~~V~~l~~~~----~~~~l~s 271 (502)
++...|+.+..||.+....... ... .. +.+ -.+.+..++.+. +..++++
T Consensus 156 ~~~~~l~v~~~dG~ll~l~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~t 235 (547)
T PF11715_consen 156 DSEANLVVSLQDGGLLRLKRSSGDSDGSVWSEELFNDSSWLRSLSGLFPWSYRGDNSSSSVAASLAVSSSEINDDTFLFT 235 (547)
T ss_dssp -SSSBEEEEESSS-EEEEEES----SSS-EE----STHHHHHCCTTTS-TT---SSSS---EEEEEE-----ETTTEEEE
T ss_pred cCCCEEEEEECCCCeEEEECCcccCCCCeeEEEEeCCCchhhhhhCcCCcccccCCCCCCccceEEEecceeCCCCEEEE
Confidence 4566777888888887776432 111 00 000 123455666666 6689999
Q ss_pred ecCCCeEEEEeccCcceeEEeee
Q 010759 272 GSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 272 gs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
-+.|+++|+||+.++.++.....
T Consensus 236 l~~D~~LRiW~l~t~~~~~~~~~ 258 (547)
T PF11715_consen 236 LSRDHTLRIWSLETGQCLATIDL 258 (547)
T ss_dssp EETTSEEEEEETTTTCEEEEEET
T ss_pred EeCCCeEEEEECCCCeEEEEecc
Confidence 99999999999999998665543
No 461
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=83.39 E-value=53 Score=36.85 Aligned_cols=30 Identities=27% Similarity=0.496 Sum_probs=25.4
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCC
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNG 244 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~ 244 (502)
....++|.|.-.+++.|...|.|+++...+
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~~~ 66 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQPG 66 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecccc
Confidence 456678999999999999999999997654
No 462
>TIGR03606 non_repeat_PQQ dehydrogenase, PQQ-dependent, s-GDH family. PQQ, or pyrroloquinoline-quinone, serves as a cofactor for a number of sugar and alcohol dehydrogenases in a limited number of bacterial species. Most characterized PQQ-dependent enzymes have multiple repeats of a sequence region described by pfam01011 (PQQ enzyme repeat), but this protein family in unusual in lacking that repeat. Below the noise cutoff are related proteins mostly from species that lack PQQ biosynthesis.
Probab=83.28 E-value=54 Score=33.04 Aligned_cols=112 Identities=14% Similarity=0.151 Sum_probs=61.7
Q ss_pred CcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecc-----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-
Q 010759 337 QGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--YVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASF- 408 (502)
Q Consensus 337 ~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~-----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~- 408 (502)
-...+.|+|.|||.+|++-...|.|++++..++. .+..+. ........|+++|+-.. ...+..+|+.....
T Consensus 29 L~~Pw~maflPDG~llVtER~~G~I~~v~~~~~~~~~~~~l~~v~~~~ge~GLlglal~PdF~~-~~~n~~lYvsyt~~~ 107 (454)
T TIGR03606 29 LNKPWALLWGPDNQLWVTERATGKILRVNPETGEVKVVFTLPEIVNDAQHNGLLGLALHPDFMQ-EKGNPYVYISYTYKN 107 (454)
T ss_pred CCCceEEEEcCCCeEEEEEecCCEEEEEeCCCCceeeeecCCceeccCCCCceeeEEECCCccc-cCCCcEEEEEEeccC
Confidence 3456789999999988877667999999765432 222111 12456788999987410 01122334443221
Q ss_pred -------CCeEEEEeCCC-------CeEEEE-e---eCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 409 -------DSTVKLWDVEL-------GKLLYS-L---NGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 409 -------dg~i~iwd~~~-------~~~~~~-~---~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
...|.-|.+.. .+.+.. + ..|. -..|+|.|||.++++.+..
T Consensus 108 ~~~~~~~~~~I~R~~l~~~~~~l~~~~~Il~~lP~~~~H~--GgrI~FgPDG~LYVs~GD~ 166 (454)
T TIGR03606 108 GDKELPNHTKIVRYTYDKSTQTLEKPVDLLAGLPAGNDHN--GGRLVFGPDGKIYYTIGEQ 166 (454)
T ss_pred CCCCccCCcEEEEEEecCCCCccccceEEEecCCCCCCcC--CceEEECCCCcEEEEECCC
Confidence 12333343321 122222 1 1233 3568899999877765544
No 463
>PF03088 Str_synth: Strictosidine synthase; InterPro: IPR018119 This entry represents a conserved region found in strictosidine synthase (4.3.3.2 from EC), a key enzyme in alkaloid biosynthesis. It catalyses the Pictet-Spengler stereospecific condensation of tryptamine with secologanin to form strictosidine []. The structure of the native enzyme from the Indian medicinal plant Rauvolfia serpentina (Serpentwood) (Devilpepper) represents the first example of a six-bladed four-stranded beta-propeller fold from the plant kingdom [].; GO: 0016844 strictosidine synthase activity, 0009058 biosynthetic process; PDB: 2FPB_A 2V91_B 2FP8_A 3V1S_B 2FPC_A 2VAQ_A 2FP9_B.
Probab=83.01 E-value=11 Score=28.22 Aligned_cols=43 Identities=7% Similarity=-0.081 Sum_probs=30.5
Q ss_pred EeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEE
Q 010759 448 GSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~ 490 (502)
+..+|++.-||..+++......+-.-.++++.++|++.|+.+-
T Consensus 33 ~~~~GRll~ydp~t~~~~vl~~~L~fpNGVals~d~~~vlv~E 75 (89)
T PF03088_consen 33 GRPTGRLLRYDPSTKETTVLLDGLYFPNGVALSPDESFVLVAE 75 (89)
T ss_dssp T---EEEEEEETTTTEEEEEEEEESSEEEEEE-TTSSEEEEEE
T ss_pred CCCCcCEEEEECCCCeEEEehhCCCccCeEEEcCCCCEEEEEe
Confidence 4456889999999988655555545578999999999777663
No 464
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=82.50 E-value=22 Score=32.42 Aligned_cols=123 Identities=19% Similarity=0.325 Sum_probs=64.1
Q ss_pred EEEcCCCCEEEEEeCC---CcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 343 VKWDPTGSLLASCSDD---VTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 343 v~~~p~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
-.+-+||++|.+|+.- ..+++++...................-+|.|... ..++++.+++.|....+..+|.-..
T Consensus 72 g~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~--~L~DG~vlIvGG~~~~t~E~~P~~~ 149 (243)
T PF07250_consen 72 GAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTAT--TLPDGRVLIVGGSNNPTYEFWPPKG 149 (243)
T ss_pred cCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccce--ECCCCCEEEEeCcCCCcccccCCcc
Confidence 4567899999998862 3477777543100011111111122224444321 2234445666666666677776532
Q ss_pred -CeEEEE--eeCC-----C-CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe
Q 010759 420 -GKLLYS--LNGH-----R-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 420 -~~~~~~--~~~h-----~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~ 469 (502)
...... +-.. . .----+...|+|++++.+..++ .|||..+.+.++.++
T Consensus 150 ~~~~~~~~~~l~~~~~~~~~nlYP~~~llPdG~lFi~an~~s--~i~d~~~n~v~~~lP 206 (243)
T PF07250_consen 150 PGPGPVTLPFLSQTSDTLPNNLYPFVHLLPDGNLFIFANRGS--IIYDYKTNTVVRTLP 206 (243)
T ss_pred CCCCceeeecchhhhccCccccCceEEEcCCCCEEEEEcCCc--EEEeCCCCeEEeeCC
Confidence 111111 1100 0 1112355679999999888764 566888777766654
No 465
>PF13449 Phytase-like: Esterase-like activity of phytase
Probab=81.53 E-value=52 Score=31.62 Aligned_cols=144 Identities=22% Similarity=0.335 Sum_probs=78.6
Q ss_pred cceeEEEEcCCCCEEEEEeCCCc------EEEEeCCC--C--cee-----eecccCCC--------cEEEEEEccCCCCC
Q 010759 338 GEVNCVKWDPTGSLLASCSDDVT------AKIWNMKQ--D--KYV-----HDLREHSK--------EIYTIRWSPTGSGT 394 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs~dg~------i~iwd~~~--~--~~~-----~~~~~~~~--------~i~~~~~sp~g~~~ 394 (502)
+.+..+.+.|++..+++.+++|. +..+.+.. + ..+ ..++...+ -.-+|++.+++.
T Consensus 20 GGlSgl~~~~~~~~~~avSD~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~G~~~~~~~~D~Egi~~~~~g~-- 97 (326)
T PF13449_consen 20 GGLSGLDYDPDDGRFYAVSDRGPNKGPPRFYTFRIDYDQGGIGGVTILDMIPLRDPDGQPFPKNGLDPEGIAVPPDGS-- 97 (326)
T ss_pred CcEeeEEEeCCCCEEEEEECCCCCCCCCcEEEEEeeccCCCccceEeccceeccCCCCCcCCcCCCChhHeEEecCCC--
Confidence 45677888876666777778777 55444432 0 001 11111111 112455544443
Q ss_pred CCCCCcEEEEEEeCC------CeEEEEeCCCCeEEEEee---------------CCCCCEEEEEECCCCCEEEEEeC---
Q 010759 395 NNPNQQLILASASFD------STVKLWDVELGKLLYSLN---------------GHREPVYSLAFSPTGEYLASGSL--- 450 (502)
Q Consensus 395 ~~~~~~~~l~sgs~d------g~i~iwd~~~~~~~~~~~---------------~h~~~v~~l~~spdg~~lasgs~--- 450 (502)
++++.=.+ ..|+-++.. |+.+..+. .......+|+++|+|+.|.++..
T Consensus 98 -------~~is~E~~~~~~~~p~I~~~~~~-G~~~~~~~vP~~~~~~~~~~~~~~~N~G~E~la~~~dG~~l~~~~E~~l 169 (326)
T PF13449_consen 98 -------FWISSEGGRTGGIPPRIRRFDLD-GRVIRRFPVPAAFLPDANGTSGRRNNRGFEGLAVSPDGRTLFAAMESPL 169 (326)
T ss_pred -------EEEEeCCccCCCCCCEEEEECCC-CcccceEccccccccccCccccccCCCCeEEEEECCCCCEEEEEECccc
Confidence 44444444 567777766 55543321 12346889999999996655432
Q ss_pred --CC--c-------EEE--EeCCC-CeeEEE--Ee--------cCCCEEEEEECCCCCEEEEEEC
Q 010759 451 --DK--S-------MHI--WSLKE-GKIVKT--YT--------GNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 451 --Dg--~-------i~i--w~~~~-~~~~~~--~~--------~~~~i~~~~ws~~g~~la~~~~ 491 (502)
|+ . ++| |+..+ +..... |. ....+.++++-++++.|+.--.
T Consensus 170 ~~d~~~~~~~~~~~~ri~~~d~~~~~~~~~~~~y~ld~~~~~~~~~~isd~~al~d~~lLvLER~ 234 (326)
T PF13449_consen 170 KQDGPRANPDNGSPLRILRYDPKTPGEPVAEYAYPLDPPPTAPGDNGISDIAALPDGRLLVLERD 234 (326)
T ss_pred cCCCcccccccCceEEEEEecCCCCCccceEEEEeCCccccccCCCCceeEEEECCCcEEEEEcc
Confidence 22 1 444 44444 322222 22 2346889999999998776543
No 466
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=81.23 E-value=45 Score=30.74 Aligned_cols=138 Identities=14% Similarity=0.196 Sum_probs=0.0
Q ss_pred EEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010759 343 VKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 422 (502)
Q Consensus 343 v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 422 (502)
|+-.|||..-+++...+.|--.|-++++...---+....-..|...|+|. .-++-+.. -|.=.|-++...
T Consensus 67 vapapdG~VWft~qg~gaiGhLdP~tGev~~ypLg~Ga~Phgiv~gpdg~---------~Witd~~~-aI~R~dpkt~ev 136 (353)
T COG4257 67 VAPAPDGAVWFTAQGTGAIGHLDPATGEVETYPLGSGASPHGIVVGPDGS---------AWITDTGL-AIGRLDPKTLEV 136 (353)
T ss_pred cccCCCCceEEecCccccceecCCCCCceEEEecCCCCCCceEEECCCCC---------eeEecCcc-eeEEecCcccce
Q ss_pred EE---EeeCCCCCEEEEEECCCCCEEEEEeCC---------CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEE
Q 010759 423 LY---SLNGHREPVYSLAFSPTGEYLASGSLD---------KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 423 ~~---~~~~h~~~v~~l~~spdg~~lasgs~D---------g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~ 490 (502)
.. ....-....+...|.+.|.+-.++... +.|++|....|. +.+.+|-.|||..-.+..
T Consensus 137 t~f~lp~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaPqG~---------gpyGi~atpdGsvwyasl 207 (353)
T COG4257 137 TRFPLPLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAPQGG---------GPYGICATPDGSVWYASL 207 (353)
T ss_pred EEeecccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccCCCC---------CCcceEECCCCcEEEEec
Q ss_pred CCCeEEEEE
Q 010759 491 ANHTVCVLD 499 (502)
Q Consensus 491 ~~~~v~v~~ 499 (502)
.+..|..+|
T Consensus 208 agnaiarid 216 (353)
T COG4257 208 AGNAIARID 216 (353)
T ss_pred cccceEEcc
No 467
>PF03022 MRJP: Major royal jelly protein; InterPro: IPR003534 The major royal jelly proteins (MRJPs) comprise 12.5% of the mass, and 82-90% of the protein content [], of honeybee (Apis mellifera) royal jelly. Royal jelly is a substance secreted by the cephalic glands of nurse bees [] and it is used to trigger development of a queen bee from a bee larva. The biological function of the MRJPs is unknown, but they are believed to play a major role in nutrition due to their high essential amino acid content []. Two royal jelly proteins, MRJP3 and MRJP5, contain a tandem repeat that results from a high genetic variablility. This polymorphism may be useful for genotyping individual bees [].; PDB: 3Q6P_B 3Q6K_A 3Q6T_A 2QE8_B.
Probab=80.76 E-value=51 Score=31.02 Aligned_cols=163 Identities=16% Similarity=0.262 Sum_probs=82.2
Q ss_pred eEEEEeccCcceeEEeeecccC------eEE--EecCCC-----ceEEEEcCCCeEEEEEcCCCcceeeecCCC------
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGP------TLD--VDWRNN-----VSFATSSTDNMIYVCKIGENRPIKTFAGHQ------ 337 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~------~~~--~~~~~~-----~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~------ 337 (502)
.|.+||+.+.+.++++.+.... ..+ ++..+. ..+++-+....|.|+++.+++..+.+..+.
T Consensus 35 KLv~~Dl~t~~li~~~~~p~~~~~~~s~lndl~VD~~~~~~~~~~aYItD~~~~glIV~dl~~~~s~Rv~~~~~~~~p~~ 114 (287)
T PF03022_consen 35 KLVAFDLKTNQLIRRYPFPPDIAPPDSFLNDLVVDVRDGNCDDGFAYITDSGGPGLIVYDLATGKSWRVLHNSFSPDPDA 114 (287)
T ss_dssp EEEEEETTTTCEEEEEE--CCCS-TCGGEEEEEEECTTTTS-SEEEEEEETTTCEEEEEETTTTEEEEEETCGCTTS-SS
T ss_pred EEEEEECCCCcEEEEEECChHHcccccccceEEEEccCCCCcceEEEEeCCCcCcEEEEEccCCcEEEEecCCcceeccc
Confidence 6788899998888877665322 222 333222 345666777789999988876544333221
Q ss_pred -------------cceeEEEEcC---CCCEEEEEeCCCcEEEEeCCCC-----ce---------eeecccCCCcEEEEEE
Q 010759 338 -------------GEVNCVKWDP---TGSLLASCSDDVTAKIWNMKQD-----KY---------VHDLREHSKEIYTIRW 387 (502)
Q Consensus 338 -------------~~v~~v~~~p---~~~~l~sgs~dg~i~iwd~~~~-----~~---------~~~~~~~~~~i~~~~~ 387 (502)
..+..++.+| +++.|.-+...+. ++|.+.+. .. +..+-........++.
T Consensus 115 ~~~~i~g~~~~~~dg~~gial~~~~~d~r~LYf~~lss~-~ly~v~T~~L~~~~~~~~~~~~~~v~~lG~k~~~s~g~~~ 193 (287)
T PF03022_consen 115 GPFTIGGESFQWPDGIFGIALSPISPDGRWLYFHPLSSR-KLYRVPTSVLRDPSLSDAQALASQVQDLGDKGSQSDGMAI 193 (287)
T ss_dssp EEEEETTEEEEETTSEEEEEE-TTSTTS-EEEEEETT-S-EEEEEEHHHHCSTT--HHH-HHHT-EEEEE---SECEEEE
T ss_pred cceeccCceEecCCCccccccCCCCCCccEEEEEeCCCC-cEEEEEHHHhhCccccccccccccceeccccCCCCceEEE
Confidence 1245555544 5555554443321 23332211 00 0111011123344555
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-----C-eEEEEeeCCCCCEEEEEECC--CCCEEEEEe
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVEL-----G-KLLYSLNGHREPVYSLAFSP--TGEYLASGS 449 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-----~-~~~~~~~~h~~~v~~l~~sp--dg~~lasgs 449 (502)
++.|. +.++--..+.|..|+... . ..+..-......+.++++.+ +|.+.+..+
T Consensus 194 D~~G~---------ly~~~~~~~aI~~w~~~~~~~~~~~~~l~~d~~~l~~pd~~~i~~~~~g~L~v~sn 254 (287)
T PF03022_consen 194 DPNGN---------LYFTDVEQNAIGCWDPDGPYTPENFEILAQDPRTLQWPDGLKIDPEGDGYLWVLSN 254 (287)
T ss_dssp ETTTE---------EEEEECCCTEEEEEETTTSB-GCCEEEEEE-CC-GSSEEEEEE-T--TS-EEEEE-
T ss_pred CCCCc---------EEEecCCCCeEEEEeCCCCcCccchheeEEcCceeeccceeeeccccCceEEEEEC
Confidence 56553 556666788899999875 2 22222222246788999988 776655543
No 468
>TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat. This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400).
Probab=80.73 E-value=10 Score=23.13 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=25.9
Q ss_pred cEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE
Q 010759 400 QLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 400 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 438 (502)
+.++++.-.+++|.++|..+++.+..+.-... -..++|
T Consensus 4 ~~lyv~~~~~~~v~~id~~~~~~~~~i~vg~~-P~~i~~ 41 (42)
T TIGR02276 4 TKLYVTNSGSNTVSVIDTATNKVIATIPVGGY-PFGVAV 41 (42)
T ss_pred CEEEEEeCCCCEEEEEECCCCeEEEEEECCCC-CceEEe
Confidence 34566666788999999998888877764322 234444
No 469
>PF14761 HPS3_N: Hermansky-Pudlak syndrome 3
Probab=80.59 E-value=6.8 Score=34.55 Aligned_cols=59 Identities=15% Similarity=0.345 Sum_probs=44.1
Q ss_pred CEEEEEeCCCcEEEEeCC--CCeeEEEEecCCCEEEEEECCCCCEEEEEECCC------eEEEE-Eee
Q 010759 443 EYLASGSLDKSMHIWSLK--EGKIVKTYTGNGGIFEVCWNKEGDKIAACFANH------TVCVL-DFR 501 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~~--~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~------~v~v~-~~~ 501 (502)
.+|..+...+.|.+|++. ...++.+|..-+.|..+.++..|++|++--... .+++| |||
T Consensus 29 d~Lfva~~g~~Vev~~l~~~~~~~~~~F~Tv~~V~~l~y~~~GDYlvTlE~k~~~~~~~fvR~Y~NWr 96 (215)
T PF14761_consen 29 DALFVAASGCKVEVYDLEQEECPLLCTFSTVGRVLQLVYSEAGDYLVTLEEKNKRSPVDFVRAYFNWR 96 (215)
T ss_pred ceEEEEcCCCEEEEEEcccCCCceeEEEcchhheeEEEeccccceEEEEEeecCCccceEEEEEEEhh
Confidence 345444556779999987 456788898888999999999999999874422 45565 665
No 470
>COG4590 ABC-type uncharacterized transport system, permease component [General function prediction only]
Probab=78.97 E-value=16 Score=35.92 Aligned_cols=156 Identities=15% Similarity=0.099 Sum_probs=87.5
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeE--ee-cCCCC----CEE-EEEecCCCCEEEEecCCCeEEEE-ec
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC--TL-SKHKG----PIF-SLKWNKKGDYLLTGSCDKTAIVW-DV 283 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~--~~-~~h~~----~V~-~l~~~~~~~~l~sgs~D~~v~iw-d~ 283 (502)
..+|..+-..|||+.+..-+. ..+.+++....... .+ ....+ .|+ .+..-..|.-++.++.||-|..| |+
T Consensus 220 ~~~v~qllL~Pdg~~LYv~~g-~~~~v~~L~~r~l~~rkl~~dspg~~~~~Vte~l~lL~Gg~SLLv~~~dG~vsQWFdv 298 (733)
T COG4590 220 FSDVSQLLLTPDGKTLYVRTG-SELVVALLDKRSLQIRKLVDDSPGDSRHQVTEQLYLLSGGFSLLVVHEDGLVSQWFDV 298 (733)
T ss_pred ccchHhhEECCCCCEEEEecC-CeEEEEeecccccchhhhhhcCCCchHHHHHHHHHHHhCceeEEEEcCCCceeeeeee
Confidence 345777788999998887665 67778876533221 11 11111 122 12223345678999999999999 44
Q ss_pred cCc-c----eeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC
Q 010759 284 KTE-E----WKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 284 ~~~-~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~ 357 (502)
+.. . .++.+.....++.-+... +...|++-...|.+.++.....+++..-. -...+.-+++||.+.++++- +
T Consensus 299 r~~~~p~l~h~R~f~l~pa~~~~l~pe~~rkgF~~l~~~G~L~~f~st~~~~lL~~~-~~~~~~~~~~Sp~~~~Ll~e-~ 376 (733)
T COG4590 299 RRDGQPHLNHIRNFKLAPAEVQFLLPETNRKGFYSLYRNGTLQSFYSTSEKLLLFER-AYQAPQLVAMSPNQAYLLSE-D 376 (733)
T ss_pred ecCCCCcceeeeccccCcccceeeccccccceEEEEcCCCceeeeecccCcceehhh-hhcCcceeeeCcccchheee-c
Confidence 322 1 122222222333333322 33456666677777666544444332211 12245568999999988754 4
Q ss_pred CCcEEEEeCCCCce
Q 010759 358 DVTAKIWNMKQDKY 371 (502)
Q Consensus 358 dg~i~iwd~~~~~~ 371 (502)
.|.|+++.+.+..+
T Consensus 377 ~gki~~~~l~Nr~P 390 (733)
T COG4590 377 QGKIRLAQLENRNP 390 (733)
T ss_pred CCceEEEEecCCCC
Confidence 57899988766543
No 471
>PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates. The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A.
Probab=78.44 E-value=9.1 Score=39.87 Aligned_cols=37 Identities=35% Similarity=0.516 Sum_probs=29.1
Q ss_pred CEEEEEECC----CCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 432 PVYSLAFSP----TGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 432 ~v~~l~~sp----dg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.+.+++.++ +..+|++.+.|+.+|+|++.++.++.+.
T Consensus 216 ~~~~~~~~~~~~~~~~~l~tl~~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 216 VAASLAVSSSEINDDTFLFTLSRDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp -EEEEEE-----ETTTEEEEEETTSEEEEEETTTTCEEEEE
T ss_pred ccceEEEecceeCCCCEEEEEeCCCeEEEEECCCCeEEEEe
Confidence 456677776 6789999999999999999999986654
No 472
>COG5290 IkappaB kinase complex, IKAP component [Transcription]
Probab=78.15 E-value=72 Score=34.01 Aligned_cols=31 Identities=13% Similarity=0.303 Sum_probs=24.7
Q ss_pred CCCCCEEEEEecCCCCEEEEecCCCeEEEEe
Q 010759 252 KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 252 ~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd 282 (502)
.-.+.|...+|+.+.+.++....+..|.+++
T Consensus 110 ~v~nGIvaa~wS~DE~~~cvvt~~r~il~~~ 140 (1243)
T COG5290 110 KVSNGIVAASWSADEKTWCVVTSTREILLFD 140 (1243)
T ss_pred cccCceEEEeeccCCceEEEEEcCceEEEEe
Confidence 3456788889999999777777788888876
No 473
>PF10214 Rrn6: RNA polymerase I-specific transcription-initiation factor; InterPro: IPR019350 RNA polymerase I-specific transcription-initiation factor Rrn6 and Rrn7 represent components of a multisubunit transcription factor essential for the initiation of rDNA transcription by Pol I []. These proteins are found in fungi.
Probab=77.59 E-value=1.2e+02 Score=33.32 Aligned_cols=28 Identities=14% Similarity=0.312 Sum_probs=24.0
Q ss_pred ceeEEEEcCC-CCEEEEEeCCCcEEEEeC
Q 010759 339 EVNCVKWDPT-GSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 339 ~v~~v~~~p~-~~~l~sgs~dg~i~iwd~ 366 (502)
+...|+|+|. ...||.-...|...||++
T Consensus 147 ~~aDv~FnP~~~~q~AiVD~~G~Wsvw~i 175 (765)
T PF10214_consen 147 PHADVAFNPWDQRQFAIVDEKGNWSVWDI 175 (765)
T ss_pred ccceEEeccCccceEEEEeccCcEEEEEe
Confidence 4667999985 468999999999999998
No 474
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=76.55 E-value=79 Score=30.92 Aligned_cols=195 Identities=12% Similarity=0.048 Sum_probs=94.6
Q ss_pred EEEEecCCCeEEEEeccCcceeEEeeecc--cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEE
Q 010759 268 YLLTGSCDKTAIVWDVKTEEWKQQFEFHS--GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVK 344 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~ 344 (502)
.++.+..+|.|.-.|+.++..+-...... ..+..-....+..+..++.++.++..+..++..+-.+.... ..+....
T Consensus 70 ~v~~~~~~G~i~A~d~~~g~~~W~~~~~~~~~~~~~~~~~~~G~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~ 149 (370)
T COG1520 70 TVYVGTRDGNIFALNPDTGLVKWSYPLLGAVAQLSGPILGSDGKIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPP 149 (370)
T ss_pred eEEEecCCCcEEEEeCCCCcEEecccCcCcceeccCceEEeCCeEEEecccceEEEEECCCCcEEEEEecCCCeEEecCc
Confidence 44555677777777777766332111110 00000001113446666777778888886666555444333 1122222
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC--CCeEEEEeCCCCeE
Q 010759 345 WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF--DSTVKLWDVELGKL 422 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~--dg~i~iwd~~~~~~ 422 (502)
...++. +..++.++.+...+..++..+-........-..+.-+|... .. .+..+.. ++.+.-.|..+|..
T Consensus 150 v~~~~~-v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~~~~~~~~------~~-~vy~~~~~~~~~~~a~~~~~G~~ 221 (370)
T COG1520 150 VVGDGT-VYVGTDDGHLYALNADTGTLKWTYETPAPLSLSIYGSPAIA------SG-TVYVGSDGYDGILYALNAEDGTL 221 (370)
T ss_pred EEcCcE-EEEecCCCeEEEEEccCCcEEEEEecCCccccccccCceee------cc-eEEEecCCCcceEEEEEccCCcE
Confidence 222333 33344677777777777765433222110000000011100 00 2333444 56677778888888
Q ss_pred EEEeeCCC----CCEEEEEECCC-----CCEEEEEeCCCcEEEEeCCCCeeEEEEec
Q 010759 423 LYSLNGHR----EPVYSLAFSPT-----GEYLASGSLDKSMHIWSLKEGKIVKTYTG 470 (502)
Q Consensus 423 ~~~~~~h~----~~v~~l~~spd-----g~~lasgs~Dg~i~iw~~~~~~~~~~~~~ 470 (502)
.+..+.+. ..+.....-.. +.-+..++.++.+...+..+|+.+..+..
T Consensus 222 ~w~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~g~~~~l~~~~G~~~W~~~~ 278 (370)
T COG1520 222 KWSQKVSQTIGRTAISTTPAVDGGPVYVDGGVYAGSYGGKLLCLDADTGELIWSFPA 278 (370)
T ss_pred eeeeeeecccCcccccccccccCceEEECCcEEEEecCCeEEEEEcCCCceEEEEec
Confidence 77643211 11100111111 12235667778888999999998887765
No 475
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=75.57 E-value=49 Score=37.26 Aligned_cols=143 Identities=17% Similarity=0.280 Sum_probs=85.1
Q ss_pred EeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC----CCeE-----EEE
Q 010759 355 CSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE----LGKL-----LYS 425 (502)
Q Consensus 355 gs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~----~~~~-----~~~ 425 (502)
-+-|+.+.+|+..++.....+.+....|..+..-....+.+.|.-+++|+.+. --.|.|+-+. ++.. .++
T Consensus 95 iTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT-~~ei~ilgV~~~~~~~~~~~f~~~~~ 173 (1311)
T KOG1900|consen 95 ITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVAT-PVEIVILGVSFDEFTGELSIFNTSFK 173 (1311)
T ss_pred EEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecc-cceEEEEEEEeccccCccccccccee
Confidence 45588899999998777777776667777776544334444444444444433 2235554332 1111 123
Q ss_pred eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC----CC---e-e-------------EEEE---e--cCCCEEEEEE
Q 010759 426 LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK----EG---K-I-------------VKTY---T--GNGGIFEVCW 479 (502)
Q Consensus 426 ~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~----~~---~-~-------------~~~~---~--~~~~i~~~~w 479 (502)
+.-....|++|....+|+.+.+|-.+ .+|.+. .| + . +.++ . ...+|..++.
T Consensus 174 i~~dg~~V~~I~~t~nGRIF~~G~dg---~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI~qi~I 250 (1311)
T KOG1900|consen 174 ISVDGVSVNCITYTENGRIFFAGRDG---NLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPIRQITI 250 (1311)
T ss_pred eecCCceEEEEEeccCCcEEEeecCC---CEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcceeeEe
Confidence 33334568999988899887766544 455431 11 1 0 1111 1 1235777777
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010759 480 NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~~~ 501 (502)
...-+.|-+=+.-++|.+||+-
T Consensus 251 D~SR~IlY~lsek~~v~~Y~i~ 272 (1311)
T KOG1900|consen 251 DNSRNILYVLSEKGTVSAYDIG 272 (1311)
T ss_pred ccccceeeeeccCceEEEEEcc
Confidence 7777788888888999999874
No 476
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=75.40 E-value=93 Score=33.05 Aligned_cols=159 Identities=24% Similarity=0.331 Sum_probs=0.0
Q ss_pred CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc--EEEEeCCCCceeeecccCCCcEEEEEEccCCCCC
Q 010759 317 NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT 394 (502)
Q Consensus 317 ~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~ 394 (502)
..+++.+... ..+..+...+..+.|+|+|..++..+.++. ..+|-+.... .+..+...+....|+|.+.
T Consensus 43 ~~~~~~d~~~----~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~l~l~~~~g---~~~~~~~~v~~~~~~~~g~-- 113 (620)
T COG1506 43 SSLWVSDGKT----VRLLTFGGGVSELRWSPDGSVLAFVSTDGGRVAQLYLVDVGG---LITKTAFGVSDARWSPDGD-- 113 (620)
T ss_pred cceEEEeccc----ccccccCCcccccccCCCCCEEEEEeccCCCcceEEEEecCC---ceeeeecccccceeCCCCC--
Q ss_pred CCCCCcEEEE---------EEe-----------------CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 395 NNPNQQLILA---------SAS-----------------FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 395 ~~~~~~~~l~---------sgs-----------------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
.++. .+. ....+.+.|..+ ...........+...++++++..++..
T Consensus 114 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (620)
T COG1506 114 ------RIAFLTAEGASKRDGGDHLFVDRLPVWFDGRGGERSDLYVVDIES--KLIKLGLGNLDVVSFATDGDGRLVASI 185 (620)
T ss_pred ------eEEEEecccccccCCceeeeecccceeecCCCCcccceEEEccCc--ccccccCCCCceeeeeeCCCCceeEEe
Q ss_pred eCCCc-------EEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 449 SLDKS-------MHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 449 s~Dg~-------i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
..+.. ..++...++.+.....+...+..+.|.++|+.++.....
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~~~~~~~~ 236 (620)
T COG1506 186 RLDDDADPWVTNLYVLIEGNGELESLTPGEGSISKLAFDADGKSIALLGTE 236 (620)
T ss_pred eeccccCCceEeeEEEecCCCceEEEcCCCceeeeeeeCCCCCeeEEeccC
No 477
>PF14727 PHTB1_N: PTHB1 N-terminus
Probab=74.74 E-value=95 Score=30.95 Aligned_cols=58 Identities=17% Similarity=0.149 Sum_probs=36.8
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCE--EEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 402 ILASASFDSTVKLWDVELGKLLYSLNGHREPV--YSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v--~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
.++.++.++++.||. ..++++...-...|| .-..|..-...|++-+.+|.|.+-=+.+
T Consensus 302 ~llV~t~t~~LlVy~--d~~L~WsA~l~~~PVal~v~~~~~~~G~IV~Ls~~G~L~v~YLGT 361 (418)
T PF14727_consen 302 NLLVGTHTGTLLVYE--DTTLVWSAQLPHVPVALSVANFNGLKGLIVSLSDEGQLSVSYLGT 361 (418)
T ss_pred EEEEEecCCeEEEEe--CCeEEEecCCCCCCEEEEecccCCCCceEEEEcCCCcEEEEEeCC
Confidence 467788999999984 345666654433443 2223333345788888888888765544
No 478
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=74.51 E-value=7.6 Score=22.32 Aligned_cols=25 Identities=32% Similarity=0.417 Sum_probs=20.9
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 444 YLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.++.++.+|.+..+|..+|+.+..+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 5777888999999999999887654
No 479
>KOG2247 consensus WD40 repeat-containing protein [General function prediction only]
Probab=74.05 E-value=0.27 Score=48.01 Aligned_cols=140 Identities=16% Similarity=0.257 Sum_probs=87.9
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 340 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
.....|-|.+.-++.++.+..+..||-...... .. ...+....++|..++. .+++.+-..+.+.+||+.+
T Consensus 37 pi~~~w~~e~~nlavaca~tiv~~YD~agq~~l-e~-n~tg~aldm~wDkegd--------vlavlAek~~piylwd~n~ 106 (615)
T KOG2247|consen 37 PIIHRWRPEGHNLAVACANTIVIYYDKAGQVIL-EL-NPTGKALDMAWDKEGD--------VLAVLAEKTGPIYLWDVNS 106 (615)
T ss_pred cceeeEecCCCceehhhhhhHHHhhhhhcceec-cc-CCchhHhhhhhccccc--------hhhhhhhcCCCeeechhhh
Confidence 335677888777888888888888885433222 21 1233445566766554 2344566788999999864
Q ss_pred CeEE-EEeeC-CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ecCCCEEEEEECCCCCEEEEEECC
Q 010759 420 GKLL-YSLNG-HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 420 ~~~~-~~~~~-h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
..-- ..+.+ |.... +.|++.+..++.+-..|.+.|++-.+.+.+-.. .+-..+..++|.+.+.. +.|+.+
T Consensus 107 eytqqLE~gg~~s~sl--l~wsKg~~el~ig~~~gn~viynhgtsR~iiv~Gkh~RRgtq~av~lEd~v-il~dcd 179 (615)
T KOG2247|consen 107 EYTQQLESGGTSSKSL--LAWSKGTPELVIGNNAGNIVIYNHGTSRRIIVMGKHQRRGTQIAVTLEDYV-ILCDCD 179 (615)
T ss_pred hhHHHHhccCcchHHH--HhhccCCccccccccccceEEEeccchhhhhhhcccccceeEEEeccccee-eecCcH
Confidence 3211 11211 22222 689999999999999999999997764433222 23346889999998844 444433
No 480
>PLN00033 photosystem II stability/assembly factor; Provisional
Probab=74.01 E-value=97 Score=30.72 Aligned_cols=145 Identities=13% Similarity=0.146 Sum_probs=78.2
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 340 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
...+...++|.+++.+..-..++-||--.......-......++.+.|.+++. +++ .+..|.+. |....
T Consensus 241 f~~v~~~~dG~~~~vg~~G~~~~s~d~G~~~W~~~~~~~~~~l~~v~~~~dg~---------l~l-~g~~G~l~-~S~d~ 309 (398)
T PLN00033 241 FSTVNRSPDGDYVAVSSRGNFYLTWEPGQPYWQPHNRASARRIQNMGWRADGG---------LWL-LTRGGGLY-VSKGT 309 (398)
T ss_pred eeeEEEcCCCCEEEEECCccEEEecCCCCcceEEecCCCccceeeeeEcCCCC---------EEE-EeCCceEE-EecCC
Confidence 44556678887777665443334444321111111123345678888888875 333 34566654 33333
Q ss_pred Ce-----EEEEeeC--CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe--c--CCCEEEEEECCCCCEEEE
Q 010759 420 GK-----LLYSLNG--HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT--G--NGGIFEVCWNKEGDKIAA 488 (502)
Q Consensus 420 ~~-----~~~~~~~--h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~--~--~~~i~~~~ws~~g~~la~ 488 (502)
++ ....+.. -...++++.|.+++..+++| ..|.|.... ..|+.=.... . ...++.+.|.++++.+++
T Consensus 310 G~~~~~~~f~~~~~~~~~~~l~~v~~~~d~~~~a~G-~~G~v~~s~-D~G~tW~~~~~~~~~~~~ly~v~f~~~~~g~~~ 387 (398)
T PLN00033 310 GLTEEDFDFEEADIKSRGFGILDVGYRSKKEAWAAG-GSGILLRST-DGGKSWKRDKGADNIAANLYSVKFFDDKKGFVL 387 (398)
T ss_pred CCcccccceeecccCCCCcceEEEEEcCCCcEEEEE-CCCcEEEeC-CCCcceeEccccCCCCcceeEEEEcCCCceEEE
Confidence 43 2222221 12358999999888766554 567665553 3444311111 1 345889999888766666
Q ss_pred EECCCeEEEE
Q 010759 489 CFANHTVCVL 498 (502)
Q Consensus 489 ~~~~~~v~v~ 498 (502)
|. +|.|..|
T Consensus 388 G~-~G~il~~ 396 (398)
T PLN00033 388 GN-DGVLLRY 396 (398)
T ss_pred eC-CcEEEEe
Confidence 54 5665433
No 481
>PF05935 Arylsulfotrans: Arylsulfotransferase (ASST); InterPro: IPR010262 This family consists of several bacterial arylsulphotransferase proteins. Arylsulphotransferase (ASST) transfers a sulphate group from phenolic sulphate esters to a phenolic acceptor substrate [].; PDB: 3ETT_B 3ELQ_A 3ETS_A.
Probab=73.94 E-value=1.1e+02 Score=31.28 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=33.7
Q ss_pred CCCEEEEE---ECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 224 EGTLLATG---SYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 224 ~~~~l~sg---~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
++-+|+++ ...+...+.|.+|.....+.........+...++|++++..+ ..++.+|+. |+.+..+.
T Consensus 114 ~gl~~~~~~~~~~~~~~~~iD~~G~Vrw~~~~~~~~~~~~~~l~nG~ll~~~~--~~~~e~D~~-G~v~~~~~ 183 (477)
T PF05935_consen 114 DGLYFVNGNDWDSSSYTYLIDNNGDVRWYLPLDSGSDNSFKQLPNGNLLIGSG--NRLYEIDLL-GKVIWEYD 183 (477)
T ss_dssp T-EEEEEETT--BEEEEEEEETTS-EEEEE-GGGT--SSEEE-TTS-EEEEEB--TEEEEE-TT---EEEEEE
T ss_pred CcEEEEeCCCCCCCceEEEECCCccEEEEEccCccccceeeEcCCCCEEEecC--CceEEEcCC-CCEEEeee
Confidence 44455555 345667777777776655433222211166678888776555 788888874 44444443
No 482
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=73.45 E-value=44 Score=31.26 Aligned_cols=85 Identities=18% Similarity=0.242 Sum_probs=52.0
Q ss_pred CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe------CCCcEEEEeCCCCeeEEEEec-----CCCEEEEE
Q 010759 410 STVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS------LDKSMHIWSLKEGKIVKTYTG-----NGGIFEVC 478 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs------~Dg~i~iw~~~~~~~~~~~~~-----~~~i~~~~ 478 (502)
..|++||..+.+=..--.+-.+.|++|.|..+.++++.|. ....+..||+.+..-...-.+ .+.+..+.
T Consensus 16 ~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~w~~~~~~~s~~ipgpv~a~~ 95 (281)
T PF12768_consen 16 PGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQTWSSLGGGSSNSIPGPVTALT 95 (281)
T ss_pred CEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCeeeecCCcccccCCCcEEEEE
Confidence 3588999876554433344567899999987777877775 345788999887653222111 24566666
Q ss_pred ECC-CC-CEEEEEE-CCCe
Q 010759 479 WNK-EG-DKIAACF-ANHT 494 (502)
Q Consensus 479 ws~-~g-~~la~~~-~~~~ 494 (502)
+.. |+ +..++|. .++.
T Consensus 96 ~~~~d~~~~~~aG~~~~g~ 114 (281)
T PF12768_consen 96 FISNDGSNFWVAGRSANGS 114 (281)
T ss_pred eeccCCceEEEeceecCCC
Confidence 532 44 3444443 3443
No 483
>PF01436 NHL: NHL repeat; InterPro: IPR001258 The NHL repeat, named after NCL-1, HT2A and Lin-41, is found largely in a large number of eukaryotic and prokaryotic proteins. For example, the repeat is found in a variety of enzymes of the copper type II, ascorbate-dependent monooxygenase family which catalyse the C terminus alpha-amidation of biological peptides []. In many it occurs in tandem arrays, for example in the ringfinger beta-box, coiled-coil (RBCC) eukaryotic growth regulators []. The 'Brain Tumor' protein (Brat) is one such growth regulator that contains a 6-bladed NHL-repeat beta-propeller [, ]. The NHL repeats are also found in serine/threonine protein kinase (STPK) in diverse range of pathogenic bacteria. These STPK are transmembrane receptors with a intracellular N-terminal kinase domain and extracellular C-terminal sensor domain. In the STPK, PknD, from Mycobacterium tuberculosis, the sensor domain forms a rigid, six-bladed b-propeller composed of NHL repeats with a flexible tether to the transmembrane domain.; GO: 0005515 protein binding; PDB: 3FVZ_A 3FW0_A 1RWL_A 1RWI_A 1Q7F_A.
Probab=73.08 E-value=8.8 Score=21.42 Aligned_cols=25 Identities=28% Similarity=0.292 Sum_probs=20.0
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEE
Q 010759 474 IFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 474 i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
..+++.+++|+.+++=+.+.+|.+|
T Consensus 4 P~gvav~~~g~i~VaD~~n~rV~vf 28 (28)
T PF01436_consen 4 PHGVAVDSDGNIYVADSGNHRVQVF 28 (28)
T ss_dssp EEEEEEETTSEEEEEECCCTEEEEE
T ss_pred CcEEEEeCCCCEEEEECCCCEEEEC
Confidence 4577888888888888888888765
No 484
>PF08801 Nucleoporin_N: Nup133 N terminal like; InterPro: IPR014908 Nucleoporins are the main components of the nuclear pore complex (NPC) in eukaryotic cells, and mediate bidirectional nucleocytoplasmic transport, especially of mRNA and proteins. RNA undergoing nuclear export first encounters the basket of the nuclear pore and many nucleoporins are accessible on the basket side of the pore [, ]. This entry represents the N-terminal of Nucleoprotein which forms a seven-bladed beta propeller structure []. ; PDB: 1XKS_A.
Probab=72.32 E-value=1e+02 Score=30.80 Aligned_cols=29 Identities=14% Similarity=0.168 Sum_probs=19.7
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 473 GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.|..++..+..+.|.+.+.++.|.+|++.
T Consensus 191 ~I~~v~~d~~r~~ly~l~~~~~Iq~w~l~ 219 (422)
T PF08801_consen 191 KIVQVAVDPSRRLLYTLTSDGSIQVWDLG 219 (422)
T ss_dssp -EEEEEEETTTTEEEEEESSE-EEEEEE-
T ss_pred ceeeEEecCCcCEEEEEeCCCcEEEEEEe
Confidence 36777777777777777777777777763
No 485
>KOG1983 consensus Tomosyn and related SNARE-interacting proteins [Intracellular trafficking, secretion, and vesicular transport]
Probab=71.92 E-value=1.8e+02 Score=32.87 Aligned_cols=28 Identities=29% Similarity=0.440 Sum_probs=24.8
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEec
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTI 183 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~ 183 (502)
....++|+|.-+++|-|...|.|+++-.
T Consensus 37 ~~~~~afD~~q~llai~t~tg~i~~yg~ 64 (993)
T KOG1983|consen 37 TPSALAFDPTQGLLAIGTRTGAIKIYGQ 64 (993)
T ss_pred CCcceeeccccceEEEEEecccEEEecc
Confidence 4567899999999999999999999964
No 486
>PF02333 Phytase: Phytase; InterPro: IPR003431 Phytase (3.1.3.8 from EC) (phytate 3-phosphatase) is a secreted enzyme which hydrolyses phytate to release inorganic phosphate. This family appears to represent a novel enzyme that shows phytase activity () and has been shown to consist of a single structural unit with a six-bladed propeller folding architecture ().; GO: 0016158 3-phytase activity; PDB: 3AMS_A 3AMR_A 1QLG_A 2POO_A 1H6L_A 1CVM_A 1POO_A.
Probab=71.21 E-value=1.1e+02 Score=30.04 Aligned_cols=188 Identities=13% Similarity=0.152 Sum_probs=95.6
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE--EEEEEC-C---CcE
Q 010759 164 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL--LATGSY-D---GQA 237 (502)
Q Consensus 164 pd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~--l~sg~~-d---g~i 237 (502)
|...+++...+++-+.+||+......... .+..+-..+ ...+.+ .|+. |+.++. + ..|
T Consensus 66 p~kSlIigTdK~~GL~VYdL~Gk~lq~~~-~Gr~NNVDv-------------rygf~l--~g~~vDlavas~R~~g~n~l 129 (381)
T PF02333_consen 66 PAKSLIIGTDKKGGLYVYDLDGKELQSLP-VGRPNNVDV-------------RYGFPL--NGKTVDLAVASDRSDGRNSL 129 (381)
T ss_dssp GGG-EEEEEETTTEEEEEETTS-EEEEE--SS-EEEEEE-------------EEEEEE--TTEEEEEEEEEE-CCCT-EE
T ss_pred cccceEEEEeCCCCEEEEcCCCcEEEeec-CCCcceeee-------------ecceec--CCceEEEEEEecCcCCCCeE
Confidence 34567888888899999998754221111 111111111 122222 2222 334432 2 468
Q ss_pred EEEECCC--ceeEeecC-------CCCCEEEEEec--C-CCC-EEEEecCCCeEEEEecc---Cc----ceeEEeeeccc
Q 010759 238 RIWSTNG--DLKCTLSK-------HKGPIFSLKWN--K-KGD-YLLTGSCDKTAIVWDVK---TE----EWKQQFEFHSG 297 (502)
Q Consensus 238 ~iw~~~~--~~~~~~~~-------h~~~V~~l~~~--~-~~~-~l~sgs~D~~v~iwd~~---~~----~~~~~~~~~~~ 297 (502)
++|.+.. .....+.. --..++++|+- | +|. +++....+|.+..|-+. .+ +.++.|.....
T Consensus 130 ~~f~id~~~g~L~~v~~~~~p~~~~~~e~yGlcly~~~~~g~~ya~v~~k~G~~~Qy~L~~~~~g~v~~~lVR~f~~~sQ 209 (381)
T PF02333_consen 130 RLFRIDPDTGELTDVTDPAAPIATDLSEPYGLCLYRSPSTGALYAFVNGKDGRVEQYELTDDGDGKVSATLVREFKVGSQ 209 (381)
T ss_dssp EEEEEETTTTEEEE-CBTTC-EE-SSSSEEEEEEEE-TTT--EEEEEEETTSEEEEEEEEE-TTSSEEEEEEEEEE-SS-
T ss_pred EEEEecCCCCcceEcCCCCcccccccccceeeEEeecCCCCcEEEEEecCCceEEEEEEEeCCCCcEeeEEEEEecCCCc
Confidence 9997643 22222221 12347888873 3 343 66778889999888764 22 23455544332
Q ss_pred CeEEEec-CCCceEEEEcCCCeEEEEEcCCCc-----ceeeecC--CCcceeEEEEcC--CC--CEEEEEeCCCcEEEEe
Q 010759 298 PTLDVDW-RNNVSFATSSTDNMIYVCKIGENR-----PIKTFAG--HQGEVNCVKWDP--TG--SLLASCSDDVTAKIWN 365 (502)
Q Consensus 298 ~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~-----~~~~~~~--h~~~v~~v~~~p--~~--~~l~sgs~dg~i~iwd 365 (502)
+-.+.. .....+..+-.+.-|+.++..... .+....+ ....|..|++-. ++ -+|+|.-.+++..||+
T Consensus 210 -~EGCVVDDe~g~LYvgEE~~GIW~y~Aep~~~~~~~~v~~~~g~~l~aDvEGlaly~~~~g~gYLivSsQG~~sf~Vy~ 288 (381)
T PF02333_consen 210 -PEGCVVDDETGRLYVGEEDVGIWRYDAEPEGGNDRTLVASADGDGLVADVEGLALYYGSDGKGYLIVSSQGDNSFAVYD 288 (381)
T ss_dssp -EEEEEEETTTTEEEEEETTTEEEEEESSCCC-S--EEEEEBSSSSB-S-EEEEEEEE-CCC-EEEEEEEGGGTEEEEEE
T ss_pred -ceEEEEecccCCEEEecCccEEEEEecCCCCCCcceeeecccccccccCccceEEEecCCCCeEEEEEcCCCCeEEEEe
Confidence 222222 334455567777777777775332 1212222 245677777743 33 3566666788999999
Q ss_pred CCC
Q 010759 366 MKQ 368 (502)
Q Consensus 366 ~~~ 368 (502)
...
T Consensus 289 r~~ 291 (381)
T PF02333_consen 289 REG 291 (381)
T ss_dssp SST
T ss_pred cCC
Confidence 764
No 487
>KOG3616 consensus Selective LIM binding factor [Transcription]
Probab=71.20 E-value=8.7 Score=40.02 Aligned_cols=66 Identities=17% Similarity=0.288 Sum_probs=44.5
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEe
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWD 282 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd 282 (502)
-++++.-+|.|+-++++..||.|++|+........+.....|-..+.|... -|+++.+|+.+.-|.
T Consensus 16 ~~~aiqshp~~~s~v~~~~d~si~lfn~~~r~qski~~~~~p~~nlv~tnh--gl~~~tsdrr~la~~ 81 (1636)
T KOG3616|consen 16 FTTAIQSHPGGQSFVLAHQDGSIILFNFIPRRQSKICEEAKPKENLVFTNH--GLVTATSDRRALAWK 81 (1636)
T ss_pred eeeeeeecCCCceEEEEecCCcEEEEeecccchhhhhhhcCCccceeeecc--ceEEEeccchhheee
Confidence 467777789999999999999999998654322112222233344555443 377777888888885
No 488
>PRK13613 lipoprotein LpqB; Provisional
Probab=70.24 E-value=1.5e+02 Score=31.26 Aligned_cols=160 Identities=12% Similarity=0.072 Sum_probs=80.0
Q ss_pred ceeeecCCCc-ceeEEEEcCCCCEEEEEeCCC-cEEEEeCCCCce----e-eecccCCCcEEEEEEccCCCCCCCCCCcE
Q 010759 329 PIKTFAGHQG-EVNCVKWDPTGSLLASCSDDV-TAKIWNMKQDKY----V-HDLREHSKEIYTIRWSPTGSGTNNPNQQL 401 (502)
Q Consensus 329 ~~~~~~~h~~-~v~~v~~~p~~~~l~sgs~dg-~i~iwd~~~~~~----~-~~~~~~~~~i~~~~~sp~g~~~~~~~~~~ 401 (502)
++.-..+... .+.+++.++++..+|..+.++ .+.+..+..+.. . ..+. ...++.-.|.+.+. .
T Consensus 353 pv~g~~g~~~~~~~s~avS~~g~~~A~v~~~~~~l~vg~~~~~~~~~~~~~~~~~--~~~Lt~PS~d~~g~--------v 422 (599)
T PRK13613 353 PVPGALGSGRVPLRRVAVSRDESRAAGISADGDSVYVGSLTPGASIGVHSWGVTA--DGRLTSPSWDGRGD--------L 422 (599)
T ss_pred cCCCccCCCCCCccceEEcCCCceEEEEcCCCcEEEEeccCCCCccccccceeec--cCcccCCcCcCCCC--------E
Confidence 3333334434 678899999999888777666 444444322221 0 0111 12233444544442 1
Q ss_pred EEEEEeCCC--eEEEEeCCCCeEEE-EeeCCCC-CEEEEEECCCCCEEEEEeC---CCcEEEEeCC---CCe-eEEE---
Q 010759 402 ILASASFDS--TVKLWDVELGKLLY-SLNGHRE-PVYSLAFSPTGEYLASGSL---DKSMHIWSLK---EGK-IVKT--- 467 (502)
Q Consensus 402 ~l~sgs~dg--~i~iwd~~~~~~~~-~~~~h~~-~v~~l~~spdg~~lasgs~---Dg~i~iw~~~---~~~-~~~~--- 467 (502)
..+-++.++ .+++..- .++... ......+ .|..+..|+||..+|.-.. .+.|.|=-+. .|. .+..
T Consensus 423 Wtvd~~~~~~~vl~v~~~-~G~~~~V~~~~l~g~~I~~lrvSrDG~RvAvv~~~~g~~~v~va~V~R~~~G~~~l~~~~~ 501 (599)
T PRK13613 423 WVVDRDPADPRLLWLLQG-DGEPVEVRTPELDGHRVVAVRVARDGVRVALIVEKDGRRSLQIGRIVRDAKAVVSVEEFRS 501 (599)
T ss_pred EEecCCCCCceEEEEEcC-CCcEEEeeccccCCCEeEEEEECCCccEEEEEEecCCCcEEEEEEEEeCCCCcEEeeccEE
Confidence 222121122 2444432 333321 1112223 7999999999976654322 3455554432 232 1111
Q ss_pred E-ecCCCEEEEEECCCCCEEEEEE-CCCeEEEEE
Q 010759 468 Y-TGNGGIFEVCWNKEGDKIAACF-ANHTVCVLD 499 (502)
Q Consensus 468 ~-~~~~~i~~~~ws~~g~~la~~~-~~~~v~v~~ 499 (502)
+ ...+.+.+++|..++.+++.+. .++..-||-
T Consensus 502 l~~~l~~v~~~~W~~~~sL~Vlg~~~~~~~~v~~ 535 (599)
T PRK13613 502 LAPELEDVTDMSWAGDSQLVVLGREEGGVQQARY 535 (599)
T ss_pred eccCCCccceeEEcCCCEEEEEeccCCCCcceEE
Confidence 1 2234588999999999888663 332344443
No 489
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=68.53 E-value=12 Score=22.66 Aligned_cols=27 Identities=19% Similarity=0.289 Sum_probs=22.9
Q ss_pred EEEEeCCCcEEEEeCCCCeeEEEEecC
Q 010759 445 LASGSLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
+..++.||.|.-.|.++|+++..+...
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~~ 29 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQTG 29 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEESS
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeCC
Confidence 455689999999999999999888654
No 490
>smart00564 PQQ beta-propeller repeat. Beta-propeller repeat occurring in enzymes with pyrrolo-quinoline quinone (PQQ) as cofactor, in Ire1p-like Ser/Thr kinases, and in prokaryotic dehydrogenases.
Probab=66.70 E-value=15 Score=21.03 Aligned_cols=25 Identities=24% Similarity=0.385 Sum_probs=20.6
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEe
Q 010759 402 ILASASFDSTVKLWDVELGKLLYSL 426 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~~~~~~~ 426 (502)
.++.++.+|.+..+|..+|+.++.+
T Consensus 8 ~v~~~~~~g~l~a~d~~~G~~~W~~ 32 (33)
T smart00564 8 TVYVGSTDGTLYALDAKTGEILWTY 32 (33)
T ss_pred EEEEEcCCCEEEEEEcccCcEEEEc
Confidence 4566788999999999999988764
No 491
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=66.61 E-value=38 Score=25.18 Aligned_cols=49 Identities=24% Similarity=0.355 Sum_probs=31.1
Q ss_pred CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCC
Q 010759 410 STVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKE 461 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~ 461 (502)
+.|..||... ......+ -..-+.|.++|++++|..++ ..+.|++|...+
T Consensus 36 ~~Vvyyd~~~--~~~va~g-~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~~ 85 (86)
T PF01731_consen 36 GNVVYYDGKE--VKVVASG-FSFANGIAISPDKKYLYVASSLAHSIHVYKRHK 85 (86)
T ss_pred ceEEEEeCCE--eEEeecc-CCCCceEEEcCCCCEEEEEeccCCeEEEEEecC
Confidence 4566666532 2222222 23458899999999886655 568899998653
No 492
>PF12768 Rax2: Cortical protein marker for cell polarity
Probab=65.93 E-value=1.2e+02 Score=28.46 Aligned_cols=132 Identities=12% Similarity=0.210 Sum_probs=72.9
Q ss_pred CCeEEEEeccCcceeEEeeecccCeEEEecCCCce-EEEEc------CCCeEEEEEcCCCcceeeecCC-----CcceeE
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FATSS------TDNMIYVCKIGENRPIKTFAGH-----QGEVNC 342 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~------~d~~i~~~~~~~~~~~~~~~~h-----~~~v~~ 342 (502)
-..|.+||..+.+|...-..-.+.|.++.|.++.. ++.+. ....+..|+..... ...+.+- .++|..
T Consensus 15 C~~lC~yd~~~~qW~~~g~~i~G~V~~l~~~~~~~Llv~G~ft~~~~~~~~la~yd~~~~~-w~~~~~~~s~~ipgpv~a 93 (281)
T PF12768_consen 15 CPGLCLYDTDNSQWSSPGNGISGTVTDLQWASNNQLLVGGNFTLNGTNSSNLATYDFKNQT-WSSLGGGSSNSIPGPVTA 93 (281)
T ss_pred CCEEEEEECCCCEeecCCCCceEEEEEEEEecCCEEEEEEeeEECCCCceeEEEEecCCCe-eeecCCcccccCCCcEEE
Confidence 45689999998888776555667889999874444 44332 34456677766543 2223331 367777
Q ss_pred EEEcC-CC-CEEEEEe-CCC--cEEEEeCCCCceeee-cccCCCcEEEEEEccC-C----CCCCCCCCcEEEEEEe
Q 010759 343 VKWDP-TG-SLLASCS-DDV--TAKIWNMKQDKYVHD-LREHSKEIYTIRWSPT-G----SGTNNPNQQLILASAS 407 (502)
Q Consensus 343 v~~~p-~~-~~l~sgs-~dg--~i~iwd~~~~~~~~~-~~~~~~~i~~~~~sp~-g----~~~~~~~~~~~l~sgs 407 (502)
+.+.. |+ ++++.|. .+| .|..||-.+...+.. .......|..+.+-|- . ........+.+|++|.
T Consensus 94 ~~~~~~d~~~~~~aG~~~~g~~~l~~~dGs~W~~i~~~~~~~~t~I~~l~~~~l~~~~~~~~~~~~~~~~Llv~G~ 169 (281)
T PF12768_consen 94 LTFISNDGSNFWVAGRSANGSTFLMKYDGSSWSSIGSDILGSGTTIRGLQVLPLNSSSHDNSSLFDSDQVLLVTGS 169 (281)
T ss_pred EEeeccCCceEEEeceecCCCceEEEEcCCceEeccccccCCCCEEEEEEEEeccccccccccccCCCcEEEEEee
Confidence 76632 33 3444444 333 466676554444433 2233456777766555 1 1111223456666665
No 493
>PF14779 BBS1: Ciliary BBSome complex subunit 1
Probab=65.07 E-value=1.1e+02 Score=28.00 Aligned_cols=67 Identities=10% Similarity=0.095 Sum_probs=43.7
Q ss_pred CCEEEEEECC------CC-CEEEEEeCCCcEEEEeCCCCeeEEEEecCCC-E---EEEEEC-CCCCEEEEEECCCeEEEE
Q 010759 431 EPVYSLAFSP------TG-EYLASGSLDKSMHIWSLKEGKIVKTYTGNGG-I---FEVCWN-KEGDKIAACFANHTVCVL 498 (502)
Q Consensus 431 ~~v~~l~~sp------dg-~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~-i---~~~~ws-~~g~~la~~~~~~~v~v~ 498 (502)
..|+|++--. ++ ..|+.|..+|.|.|.|.....++..+.-.+. + ..-.|. -|. +|+++..||.|+++
T Consensus 177 t~ITcm~tikk~~~d~~a~scLViGTE~~~i~iLd~~af~il~~~~lpsvPv~i~~~G~~devdy-RI~Va~Rdg~iy~i 255 (257)
T PF14779_consen 177 TVITCMATIKKSSADEDAVSCLVIGTESGEIYILDPQAFTILKQVQLPSVPVFISVSGQYDEVDY-RIVVACRDGKIYTI 255 (257)
T ss_pred ceeEEeeeecccccCCCCcceEEEEecCCeEEEECchhheeEEEEecCCCceEEEEEeeeeccce-EEEEEeCCCEEEEE
Confidence 4577775421 12 5789999999999999988777766644332 1 122344 344 67777788887654
No 494
>KOG1900 consensus Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170) [Nuclear structure; Intracellular trafficking, secretion, and vesicular transport]
Probab=64.88 E-value=89 Score=35.34 Aligned_cols=138 Identities=14% Similarity=0.219 Sum_probs=81.3
Q ss_pred cCCCeEEEEEcCCCcceeeecCCCcceeEEEEc--------CCCCEEEEEeCCCcEEEEeCC----CCce---e--eecc
Q 010759 314 STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD--------PTGSLLASCSDDVTAKIWNMK----QDKY---V--HDLR 376 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~--------p~~~~l~sgs~dg~i~iwd~~----~~~~---~--~~~~ 376 (502)
+-|+.+++|+...+.....+.+-...|..|..- |.=+++..-+.--.|.|+-+. ++.. . ..+.
T Consensus 96 TiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~IqhlLvvaT~~ei~ilgV~~~~~~~~~~~f~~~~~i~ 175 (1311)
T KOG1900|consen 96 TIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEIQHLLVVATPVEIVILGVSFDEFTGELSIFNTSFKIS 175 (1311)
T ss_pred EeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhhheeEEecccceEEEEEEEeccccCcccccccceeee
Confidence 467889999998877777777766666666532 222333333333345555332 1110 0 1111
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE--eCCCC---e-E----------------EEEee-CCCCCE
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW--DVELG---K-L----------------LYSLN-GHREPV 433 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw--d~~~~---~-~----------------~~~~~-~h~~~v 433 (502)
...-.|.++....+|. ++ -++.||.|.=. ....+ + + +..+. .+..+|
T Consensus 176 ~dg~~V~~I~~t~nGR---------IF-~~G~dg~lyEl~Yq~~~gWf~~rc~Kiclt~s~ls~lvPs~~~~~~~~~dpI 245 (1311)
T KOG1900|consen 176 VDGVSVNCITYTENGR---------IF-FAGRDGNLYELVYQAEDGWFGSRCRKICLTKSVLSSLVPSLLSVPGSSKDPI 245 (1311)
T ss_pred cCCceEEEEEeccCCc---------EE-EeecCCCEEEEEEeccCchhhcccccccCchhHHHHhhhhhhcCCCCCCCcc
Confidence 2244567777666675 34 45567744321 11111 1 1 11223 567799
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 434 YSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 434 ~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
..|+.......|.+-+.-|+|.+|++..
T Consensus 246 ~qi~ID~SR~IlY~lsek~~v~~Y~i~~ 273 (1311)
T KOG1900|consen 246 RQITIDNSRNILYVLSEKGTVSAYDIGG 273 (1311)
T ss_pred eeeEeccccceeeeeccCceEEEEEccC
Confidence 9999998889999999999999999976
No 495
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=64.16 E-value=20 Score=32.59 Aligned_cols=81 Identities=15% Similarity=0.067 Sum_probs=47.3
Q ss_pred EEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeC-C--CcEEEEeCCC----CeeE---EEEecCCCEEEEEECC
Q 010759 412 VKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL-D--KSMHIWSLKE----GKIV---KTYTGNGGIFEVCWNK 481 (502)
Q Consensus 412 i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~-D--g~i~iw~~~~----~~~~---~~~~~~~~i~~~~ws~ 481 (502)
-.+||+.+++...--......+.+-+|-|||++|.+||. + ..|++|+..+ .... ..+......-++.--|
T Consensus 48 s~~yD~~tn~~rpl~v~td~FCSgg~~L~dG~ll~tGG~~~G~~~ir~~~p~~~~~~~~w~e~~~~m~~~RWYpT~~~L~ 127 (243)
T PF07250_consen 48 SVEYDPNTNTFRPLTVQTDTFCSGGAFLPDGRLLQTGGDNDGNKAIRIFTPCTSDGTCDWTESPNDMQSGRWYPTATTLP 127 (243)
T ss_pred EEEEecCCCcEEeccCCCCCcccCcCCCCCCCEEEeCCCCccccceEEEecCCCCCCCCceECcccccCCCccccceECC
Confidence 357888876553221112223344467899999999886 3 3588888654 1111 1111122233566678
Q ss_pred CCCEEEEEECC
Q 010759 482 EGDKIAACFAN 492 (502)
Q Consensus 482 ~g~~la~~~~~ 492 (502)
||+.|+.|+.+
T Consensus 128 DG~vlIvGG~~ 138 (243)
T PF07250_consen 128 DGRVLIVGGSN 138 (243)
T ss_pred CCCEEEEeCcC
Confidence 99999988765
No 496
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=63.67 E-value=20 Score=20.01 Aligned_cols=25 Identities=16% Similarity=0.298 Sum_probs=20.0
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
.|.+|+.++. +++.+..-+.+++|.
T Consensus 3 ~i~aia~g~~--~vavaTS~~~lRifs 27 (27)
T PF12341_consen 3 EIEAIAAGDS--WVAVATSAGYLRIFS 27 (27)
T ss_pred eEEEEEccCC--EEEEEeCCCeEEecC
Confidence 4778887654 889888889999984
No 497
>COG1520 FOG: WD40-like repeat [Function unknown]
Probab=62.28 E-value=1.6e+02 Score=28.75 Aligned_cols=159 Identities=14% Similarity=0.087 Sum_probs=73.7
Q ss_pred CCCEEEEecCCCeEEEEeccCcceeEEeeeccc-CeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC---cce
Q 010759 265 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ---GEV 340 (502)
Q Consensus 265 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~---~~v 340 (502)
+| .++.++.++.+..+|..+++.+-.+..... .........+..+...+.++.++..+..++...-.+..-. ..+
T Consensus 111 ~G-~i~~g~~~g~~y~ld~~~G~~~W~~~~~~~~~~~~~~v~~~~~v~~~s~~g~~~al~~~tG~~~W~~~~~~~~~~~~ 189 (370)
T COG1520 111 DG-KIYVGSWDGKLYALDASTGTLVWSRNVGGSPYYASPPVVGDGTVYVGTDDGHLYALNADTGTLKWTYETPAPLSLSI 189 (370)
T ss_pred CC-eEEEecccceEEEEECCCCcEEEEEecCCCeEEecCcEEcCcEEEEecCCCeEEEEEccCCcEEEEEecCCcccccc
Confidence 45 488888999999999888876665554440 0000001112222223355666665555444322211100 000
Q ss_pred eEEEEcCCCCEEEEEeC--CCcEEEEeCCCCceeeecccCCC----cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEE
Q 010759 341 NCVKWDPTGSLLASCSD--DVTAKIWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKL 414 (502)
Q Consensus 341 ~~v~~~p~~~~l~sgs~--dg~i~iwd~~~~~~~~~~~~~~~----~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~i 414 (502)
..--...++. ++.+.. ++.+.-.|..++...-..+.+.. .+........+.. ..+. -+..++.++.+..
T Consensus 190 ~~~~~~~~~~-vy~~~~~~~~~~~a~~~~~G~~~w~~~~~~~~~~~~~~~~~~~~~~~v--~v~~--~~~~~~~~g~~~~ 264 (370)
T COG1520 190 YGSPAIASGT-VYVGSDGYDGILYALNAEDGTLKWSQKVSQTIGRTAISTTPAVDGGPV--YVDG--GVYAGSYGGKLLC 264 (370)
T ss_pred ccCceeecce-EEEecCCCcceEEEEEccCCcEeeeeeeecccCcccccccccccCceE--EECC--cEEEEecCCeEEE
Confidence 0000012333 333433 44455556666655433211100 0000000000000 0000 1356778888999
Q ss_pred EeCCCCeEEEEeeCC
Q 010759 415 WDVELGKLLYSLNGH 429 (502)
Q Consensus 415 wd~~~~~~~~~~~~h 429 (502)
.|..+++.++.+...
T Consensus 265 l~~~~G~~~W~~~~~ 279 (370)
T COG1520 265 LDADTGELIWSFPAG 279 (370)
T ss_pred EEcCCCceEEEEecc
Confidence 999999999888753
No 498
>PF01011 PQQ: PQQ enzyme repeat family.; InterPro: IPR002372 Pyrrolo-quinoline quinone (PQQ) is a redox coenzyme, which serves as a cofactor for a number of enzymes (quinoproteins) and particularly for some bacterial dehydrogenases [, ]. A number of bacterial quinoproteins belong to this family. Enzymes in this group have repeats of a beta propeller.; PDB: 1H4I_C 1H4J_E 1W6S_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A 1G72_A ....
Probab=61.69 E-value=23 Score=21.37 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=22.0
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 403 LASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
+..++.+|.|.-.|.++|+.++.+..
T Consensus 3 v~~~~~~g~l~AlD~~TG~~~W~~~~ 28 (38)
T PF01011_consen 3 VYVGTPDGYLYALDAKTGKVLWKFQT 28 (38)
T ss_dssp EEEETTTSEEEEEETTTTSEEEEEES
T ss_pred EEEeCCCCEEEEEECCCCCEEEeeeC
Confidence 44568999999999999999988763
No 499
>PF01731 Arylesterase: Arylesterase; InterPro: IPR002640 The serum paraoxonases/arylesterases are enzymes that catalyse the hydrolysis of the toxic metabolites of a variety of organophosphorus insecticides. The enzymes hydrolyse a broad spectrum of organophosphate substrates, including paraoxon and a number of aromatic carboxylic acid esters (e.g., phenyl acetate), and hence confer resistance to organophosphate toxicity []. Mammals have 3 distinct paraoxonase types, termed PON1-3 [, ]. In mice and humans, the PON genes are found on the same chromosome in close proximity. PON activity has been found in variety of tissues, with highest levels in liver and serum - the source of serum PON is thought to be the liver. Unlike mammals, fish and avian species lack paraoxonase activity. Human and rabbit PONs appear to have two distinct Ca2+ binding sites, one required for stability and one required for catalytic activity. The Ca2+ dependency of PONs suggests a mechanism of hydrolysis where Ca2+ acts as the electrophillic catalyst, like that proposed for phospholipase A2. The paraoxonase enzymes, PON1 and PON3, are high density lipoprotein (HDL)- associated proteins capable of preventing oxidative modification of low density lipoproteins (LPL) []. Although PON2 has oxidative properties, the enzyme does not associate with HDL. Within a given species, PON1, PON2 and PON3 share ~60% amino acid sequence identity, whereas between mammalian species particular PONs (1,2 or 3) share 79-90% identity at the amino acid level. Human PON1 and PON3 share numerous conserved phosphorylation and N-glycosylation sites; however, it is not known whether the PON proteins are modified at these sites, or whether modification at these sites is required for activity in vivo []. This family consists of arylesterases (Also known as serum paraoxonase) 3.1.1.2 from EC. These enzymes hydrolyse organophosphorus esters such as paraoxon and are found in the liver and blood. They confer resistance to organophosphate toxicity []. Human arylesterase (PON1) P27169 from SWISSPROT is associated with HDL and may protect against LDL oxidation [].; GO: 0004064 arylesterase activity
Probab=60.95 E-value=56 Score=24.27 Aligned_cols=48 Identities=13% Similarity=0.050 Sum_probs=30.8
Q ss_pred CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEE-ECCCeEEEEEee
Q 010759 452 KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAAC-FANHTVCVLDFR 501 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~-~~~~~v~v~~~~ 501 (502)
+.|..|+..+-+ ....+-...+++..+|++++|..+ ...+.|+||..+
T Consensus 36 ~~Vvyyd~~~~~--~va~g~~~aNGI~~s~~~k~lyVa~~~~~~I~vy~~~ 84 (86)
T PF01731_consen 36 GNVVYYDGKEVK--VVASGFSFANGIAISPDKKYLYVASSLAHSIHVYKRH 84 (86)
T ss_pred ceEEEEeCCEeE--EeeccCCCCceEEEcCCCCEEEEEeccCCeEEEEEec
Confidence 345556644322 222333446788999999977766 456899999865
No 500
>PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal
Probab=60.74 E-value=91 Score=25.39 Aligned_cols=117 Identities=10% Similarity=0.083 Sum_probs=63.3
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEE---ECC--CCCEEEEEEC
Q 010759 159 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLD---WNG--EGTLLATGSY 233 (502)
Q Consensus 159 ~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~---~s~--~~~~l~sg~~ 233 (502)
.-.|.....-|+.++.-|+|.|++..........+..++..+- ..+.|++|+ |.| +...|+.|+.
T Consensus 3 iGkfDG~~pcL~~aT~~gKV~IH~ph~~~~~~~~~~~~i~~LN----------in~~italaaG~l~~~~~~D~LliGt~ 72 (136)
T PF14781_consen 3 IGKFDGVHPCLACATTGGKVFIHNPHERGQRTGRQDSDISFLN----------INQEITALAAGRLKPDDGRDCLLIGTQ 72 (136)
T ss_pred EEEeCCCceeEEEEecCCEEEEECCCccccccccccCceeEEE----------CCCceEEEEEEecCCCCCcCEEEEecc
Confidence 3456556667888888999999986543322211222222221 134567765 332 3456666665
Q ss_pred CCcEEEEECCCceeEeecCCCCCEEEEEec---CCCCEEEEecCCCeEEEEeccCc
Q 010759 234 DGQARIWSTNGDLKCTLSKHKGPIFSLKWN---KKGDYLLTGSCDKTAIVWDVKTE 286 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~---~~~~~l~sgs~D~~v~iwd~~~~ 286 (502)
..+..||+....-...+.-...|.++.+- ....-++..+....|.-||....
T Consensus 73 -t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGncsi~Gfd~~G~ 127 (136)
T PF14781_consen 73 -TSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGNCSIQGFDYEGN 127 (136)
T ss_pred -ceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECceEEEEEeCCCCc
Confidence 57889998654333333334556666552 22223444444566666665443
Done!