Query 010759
Match_columns 502
No_of_seqs 486 out of 3547
Neff 10.3
Searched_HMMs 29240
Date Mon Mar 25 13:39:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010759.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010759hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 1.5E-49 5.1E-54 396.0 42.7 297 147-501 101-410 (410)
2 1nr0_A Actin interacting prote 100.0 3.1E-48 1.1E-52 406.4 47.3 332 145-501 50-521 (611)
3 3ow8_A WD repeat-containing pr 100.0 4.9E-48 1.7E-52 372.0 42.8 289 148-501 26-320 (321)
4 1r5m_A SIR4-interacting protei 100.0 1.3E-47 4.3E-52 382.8 44.7 333 152-501 43-424 (425)
5 1got_B GT-beta; complex (GTP-b 100.0 1.9E-47 6.3E-52 371.3 44.2 288 144-499 45-340 (340)
6 1nr0_A Actin interacting prote 100.0 2.7E-47 9.3E-52 399.2 46.9 327 147-501 140-566 (611)
7 2ymu_A WD-40 repeat protein; u 100.0 1.1E-46 3.8E-51 392.1 50.4 325 143-499 251-577 (577)
8 2ynn_A Coatomer subunit beta'; 100.0 9.8E-47 3.4E-51 360.3 42.7 289 147-500 6-300 (304)
9 2pbi_B Guanine nucleotide-bind 100.0 1.8E-46 6.1E-51 366.3 43.1 288 145-458 55-354 (354)
10 3frx_A Guanine nucleotide-bind 100.0 2.1E-45 7.1E-50 353.6 44.8 289 148-501 11-316 (319)
11 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.3E-46 2.5E-50 360.8 41.8 295 146-501 7-334 (345)
12 4gqb_B Methylosome protein 50; 100.0 2.2E-46 7.4E-51 363.6 37.0 293 152-501 28-330 (344)
13 4g56_B MGC81050 protein; prote 100.0 2.5E-46 8.5E-51 365.7 36.9 288 151-501 39-342 (357)
14 3iz6_a 40S ribosomal protein R 100.0 7.9E-47 2.7E-51 372.6 33.0 292 146-463 58-377 (380)
15 2ymu_A WD-40 repeat protein; u 100.0 8.4E-45 2.9E-49 378.0 50.0 326 143-500 210-537 (577)
16 2hes_X YDR267CP; beta-propelle 100.0 2.6E-45 8.8E-50 354.7 41.3 296 146-501 6-327 (330)
17 2xzm_R RACK1; ribosome, transl 100.0 5.3E-44 1.8E-48 347.4 42.0 295 146-501 13-339 (343)
18 1erj_A Transcriptional repress 100.0 1.6E-43 5.5E-48 350.6 45.0 298 152-501 62-388 (393)
19 4ery_A WD repeat-containing pr 100.0 2.8E-43 9.7E-48 337.5 45.0 289 146-501 15-311 (312)
20 1gxr_A ESG1, transducin-like e 100.0 1.7E-43 5.9E-48 341.7 43.7 321 153-502 8-337 (337)
21 2pm9_A Protein WEB1, protein t 100.0 6.2E-46 2.1E-50 370.2 25.9 325 153-501 11-413 (416)
22 2pbi_B Guanine nucleotide-bind 100.0 3.4E-43 1.2E-47 343.1 44.1 280 211-499 62-354 (354)
23 4aow_A Guanine nucleotide-bind 100.0 7.3E-43 2.5E-47 338.1 42.5 293 148-463 32-339 (340)
24 3iz6_a 40S ribosomal protein R 100.0 5.8E-44 2E-48 352.1 34.2 282 211-501 64-374 (380)
25 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.5E-42 1.2E-46 346.7 46.2 317 147-501 111-441 (445)
26 1pgu_A Actin interacting prote 100.0 6.2E-42 2.1E-46 358.7 45.5 328 145-501 151-613 (615)
27 3dm0_A Maltose-binding peripla 100.0 2.6E-42 8.9E-47 367.1 42.6 293 148-501 376-692 (694)
28 3zwl_B Eukaryotic translation 100.0 2.7E-41 9.2E-46 330.4 44.9 297 147-501 25-345 (369)
29 2oaj_A Protein SNI1; WD40 repe 100.0 3.7E-42 1.3E-46 373.7 38.9 332 149-501 12-518 (902)
30 1pgu_A Actin interacting prote 100.0 5.5E-41 1.9E-45 351.5 45.0 345 145-501 54-571 (615)
31 3vl1_A 26S proteasome regulato 100.0 3.7E-42 1.3E-46 343.6 34.3 320 155-501 57-418 (420)
32 3ei3_B DNA damage-binding prot 100.0 1.2E-41 4E-46 335.9 36.4 285 147-501 66-381 (383)
33 3v7d_B Cell division control p 100.0 1.4E-40 4.7E-45 336.8 44.2 317 147-498 114-459 (464)
34 3mkq_A Coatomer beta'-subunit; 100.0 6.8E-41 2.3E-45 362.7 44.1 327 147-501 6-385 (814)
35 3ow8_A WD repeat-containing pr 100.0 4.7E-41 1.6E-45 323.3 37.3 246 148-460 74-320 (321)
36 4gqb_B Methylosome protein 50; 100.0 4.7E-41 1.6E-45 326.0 36.8 252 151-464 79-334 (344)
37 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-40 5.2E-45 376.1 46.7 336 147-501 608-1073(1249)
38 1sq9_A Antiviral protein SKI8; 100.0 4.5E-41 1.5E-45 333.0 36.4 295 147-463 9-397 (397)
39 2oaj_A Protein SNI1; WD40 repe 100.0 6.6E-41 2.3E-45 363.9 40.5 333 147-500 92-659 (902)
40 3k26_A Polycomb protein EED; W 100.0 2E-41 6.8E-46 331.1 31.8 293 148-501 12-365 (366)
41 1k8k_C P40, ARP2/3 complex 41 100.0 1.4E-40 4.9E-45 326.1 36.7 291 149-501 3-360 (372)
42 3sfz_A APAF-1, apoptotic pepti 100.0 5.5E-42 1.9E-46 387.9 30.3 343 146-500 874-1247(1249)
43 2j04_B YDR362CP, TAU91; beta p 100.0 4.2E-42 1.4E-46 350.2 25.8 323 153-502 132-517 (524)
44 3odt_A Protein DOA1; ubiquitin 100.0 5.8E-40 2E-44 313.7 39.1 289 145-469 9-304 (313)
45 2pm7_B Protein transport prote 100.0 2.6E-40 8.9E-45 314.7 35.7 254 147-460 2-284 (297)
46 4aow_A Guanine nucleotide-bind 100.0 6.2E-39 2.1E-43 310.4 45.7 282 209-501 34-336 (340)
47 4e54_B DNA damage-binding prot 100.0 6.6E-41 2.3E-45 336.4 31.1 287 148-501 113-429 (435)
48 1sq9_A Antiviral protein SKI8; 100.0 1E-39 3.5E-44 323.3 38.9 281 209-501 12-394 (397)
49 3i2n_A WD repeat-containing pr 100.0 2.9E-40 1E-44 321.8 33.5 293 147-464 11-356 (357)
50 1got_B GT-beta; complex (GTP-b 100.0 2.5E-39 8.7E-44 314.0 39.1 244 211-501 53-300 (340)
51 4a11_B DNA excision repair pro 100.0 4.5E-39 1.5E-43 319.2 41.3 342 146-501 35-404 (408)
52 2ynn_A Coatomer subunit beta'; 100.0 1.5E-39 5.2E-44 310.4 36.5 249 245-501 4-258 (304)
53 1gxr_A ESG1, transducin-like e 100.0 1.5E-38 5.2E-43 307.0 43.6 285 150-459 47-335 (337)
54 3dw8_B Serine/threonine-protei 100.0 6.5E-40 2.2E-44 329.9 34.7 298 152-501 26-445 (447)
55 1vyh_C Platelet-activating fac 100.0 1.2E-39 4.1E-44 324.5 35.7 247 246-501 100-368 (410)
56 3dwl_C Actin-related protein 2 100.0 3E-41 1E-45 332.0 23.3 288 149-500 6-377 (377)
57 4g56_B MGC81050 protein; prote 100.0 1.3E-39 4.4E-44 318.1 32.9 251 149-461 89-343 (357)
58 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.8E-39 1.3E-43 313.4 35.8 257 149-468 56-342 (345)
59 2pm7_B Protein transport prote 100.0 3.2E-39 1.1E-43 307.1 34.2 252 211-501 7-284 (297)
60 3frx_A Guanine nucleotide-bind 100.0 1.2E-38 4.2E-43 306.3 38.4 248 208-501 12-266 (319)
61 4aez_A CDC20, WD repeat-contai 100.0 1E-38 3.5E-43 317.0 38.7 288 147-501 84-379 (401)
62 3odt_A Protein DOA1; ubiquitin 100.0 4.1E-38 1.4E-42 300.8 40.4 274 210-501 15-295 (313)
63 3bg1_A Protein SEC13 homolog; 100.0 7.2E-40 2.5E-44 314.5 28.0 255 148-460 7-292 (316)
64 3gre_A Serine/threonine-protei 100.0 5.5E-40 1.9E-44 329.8 28.3 309 161-499 34-437 (437)
65 2hes_X YDR267CP; beta-propelle 100.0 9.1E-39 3.1E-43 308.7 33.1 255 148-461 50-328 (330)
66 3mkq_A Coatomer beta'-subunit; 100.0 2.6E-38 8.8E-43 342.5 39.2 324 146-499 47-420 (814)
67 1yfq_A Cell cycle arrest prote 100.0 2E-38 6.7E-43 307.3 34.4 283 148-458 5-321 (342)
68 2pm9_A Protein WEB1, protein t 100.0 2.3E-39 8E-44 322.6 27.3 279 215-501 14-336 (416)
69 4h5i_A Guanine nucleotide-exch 100.0 5E-39 1.7E-43 314.8 29.1 288 155-461 15-343 (365)
70 3f3f_A Nucleoporin SEH1; struc 100.0 2.5E-38 8.4E-43 306.3 33.2 303 148-468 5-344 (351)
71 3gre_A Serine/threonine-protei 100.0 7.4E-39 2.5E-43 321.6 29.9 291 143-458 51-437 (437)
72 3mmy_A MRNA export factor; mRN 100.0 7.3E-38 2.5E-42 305.9 35.1 293 142-460 27-345 (368)
73 1erj_A Transcriptional repress 100.0 1.3E-37 4.6E-42 308.0 36.9 249 153-461 122-389 (393)
74 3i2n_A WD repeat-containing pr 100.0 4.8E-38 1.6E-42 306.2 33.2 281 211-501 16-352 (357)
75 4gga_A P55CDC, cell division c 100.0 5.5E-37 1.9E-41 306.4 41.5 276 214-501 106-394 (420)
76 1r5m_A SIR4-interacting protei 100.0 1.4E-37 4.8E-42 310.0 35.8 278 212-501 44-360 (425)
77 3bg1_A Protein SEC13 homolog; 100.0 1.8E-38 6.2E-43 304.7 27.9 253 210-501 10-292 (316)
78 2xzm_R RACK1; ribosome, transl 100.0 9E-37 3.1E-41 296.4 39.8 248 210-501 18-284 (343)
79 1p22_A F-BOX/WD-repeat protein 100.0 2.3E-37 7.7E-42 310.7 35.3 294 148-480 127-433 (435)
80 4gga_A P55CDC, cell division c 100.0 2.7E-36 9.3E-41 301.4 42.2 299 142-467 89-401 (420)
81 3v7d_B Cell division control p 100.0 1.7E-36 5.7E-41 306.9 39.8 269 216-501 125-420 (464)
82 4ggc_A P55CDC, cell division c 100.0 6E-36 2.1E-40 286.6 41.4 276 216-501 28-314 (318)
83 3vl1_A 26S proteasome regulato 100.0 8.1E-38 2.8E-42 312.1 27.9 284 215-501 58-364 (420)
84 3jrp_A Fusion protein of prote 100.0 1.2E-36 4.1E-41 298.6 34.5 252 147-461 4-287 (379)
85 2j04_B YDR362CP, TAU91; beta p 100.0 9.2E-38 3.2E-42 318.2 27.3 295 148-462 201-518 (524)
86 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-36 8.2E-41 303.3 36.7 268 212-501 132-413 (435)
87 4ggc_A P55CDC, cell division c 100.0 2E-35 6.9E-40 282.9 41.5 294 142-462 9-316 (318)
88 2j04_A TAU60, YPL007P, hypothe 100.0 3.6E-38 1.2E-42 313.9 22.0 300 152-491 13-350 (588)
89 4h5i_A Guanine nucleotide-exch 100.0 1.5E-36 5.1E-41 297.3 31.9 276 213-501 14-342 (365)
90 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.8E-35 6.3E-40 297.7 40.5 280 145-461 150-442 (445)
91 1yfq_A Cell cycle arrest prote 100.0 1.5E-36 5.1E-41 294.1 31.3 269 211-494 9-315 (342)
92 4ery_A WD repeat-containing pr 100.0 1.8E-35 6.2E-40 283.1 37.3 247 246-501 15-267 (312)
93 2vdu_B TRNA (guanine-N(7)-)-me 100.0 5.7E-35 2E-39 294.5 39.7 300 154-501 4-390 (450)
94 4a11_B DNA excision repair pro 100.0 4.1E-35 1.4E-39 290.7 37.5 281 211-501 41-364 (408)
95 3dm0_A Maltose-binding peripla 100.0 2.5E-35 8.7E-40 313.3 36.6 244 209-501 378-631 (694)
96 1k8k_C P40, ARP2/3 complex 41 100.0 4.8E-35 1.6E-39 286.8 33.9 241 212-501 7-273 (372)
97 4e54_B DNA damage-binding prot 100.0 4.5E-36 1.5E-40 301.3 26.5 265 147-465 157-434 (435)
98 3vu4_A KMHSV2; beta-propeller 100.0 1.7E-34 5.7E-39 281.7 36.1 273 210-501 16-335 (355)
99 3jrp_A Fusion protein of prote 100.0 4.4E-35 1.5E-39 287.5 31.6 256 246-501 3-286 (379)
100 3ei3_B DNA damage-binding prot 100.0 6.6E-35 2.3E-39 287.5 31.5 246 151-461 115-382 (383)
101 3dwl_C Actin-related protein 2 100.0 2E-36 6.9E-41 297.6 20.3 239 213-500 11-279 (377)
102 3f3f_A Nucleoporin SEH1; struc 100.0 2.9E-34 9.8E-39 277.7 34.4 248 248-501 5-336 (351)
103 3dw8_B Serine/threonine-protei 100.0 1.8E-35 6.1E-40 297.5 26.1 274 212-501 27-372 (447)
104 3mmy_A MRNA export factor; mRN 100.0 2.4E-34 8.2E-39 280.9 33.0 278 210-496 36-340 (368)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 6.7E-35 2.3E-39 289.6 28.8 275 216-501 37-341 (402)
106 3jro_A Fusion protein of prote 100.0 2.4E-35 8.2E-40 315.6 26.9 251 148-461 3-285 (753)
107 4aez_A CDC20, WD repeat-contai 100.0 7.2E-34 2.4E-38 282.1 35.2 247 152-468 132-387 (401)
108 2xyi_A Probable histone-bindin 100.0 3.7E-34 1.3E-38 286.8 33.4 260 148-462 122-411 (430)
109 3lrv_A PRE-mRNA-splicing facto 100.0 3E-35 1E-39 285.7 24.4 263 161-498 43-329 (343)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 1.1E-34 3.6E-39 288.1 27.6 286 156-464 36-345 (402)
111 3vu4_A KMHSV2; beta-propeller 100.0 4.1E-34 1.4E-38 279.0 31.0 278 147-461 12-336 (355)
112 3bws_A Protein LP49; two-domai 100.0 2.1E-32 7.3E-37 274.0 44.0 277 214-501 123-431 (433)
113 3k26_A Polycomb protein EED; W 100.0 1.7E-34 5.7E-39 281.9 28.0 266 153-460 68-365 (366)
114 2xyi_A Probable histone-bindin 100.0 1.7E-33 5.9E-38 282.0 33.7 246 248-501 122-409 (430)
115 3zwl_B Eukaryotic translation 100.0 2.5E-32 8.5E-37 266.7 37.5 245 247-501 25-303 (369)
116 3jro_A Fusion protein of prote 100.0 6.3E-34 2.2E-38 304.7 27.2 253 210-501 6-284 (753)
117 4gq1_A NUP37; propeller, trans 100.0 6.5E-34 2.2E-38 281.5 24.9 234 215-499 91-386 (393)
118 4gq1_A NUP37; propeller, trans 100.0 8.4E-34 2.9E-38 280.7 25.0 282 149-459 84-387 (393)
119 2j04_A TAU60, YPL007P, hypothe 100.0 1.1E-33 3.6E-38 281.8 21.5 257 213-500 15-295 (588)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.1E-32 3.8E-37 267.5 25.0 235 220-501 43-291 (343)
121 1l0q_A Surface layer protein; 100.0 7.9E-30 2.7E-34 251.7 43.9 273 167-471 3-285 (391)
122 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.6E-31 2.2E-35 264.8 34.5 237 214-500 5-337 (450)
123 2w18_A PALB2, fancn, partner a 100.0 1.9E-30 6.6E-35 243.1 32.5 273 215-501 41-356 (356)
124 1l0q_A Surface layer protein; 100.0 1E-29 3.4E-34 251.0 39.3 263 226-501 3-274 (391)
125 2w18_A PALB2, fancn, partner a 100.0 3.8E-31 1.3E-35 247.9 24.7 187 224-459 144-355 (356)
126 3bws_A Protein LP49; two-domai 100.0 1.2E-29 4E-34 254.1 37.3 286 149-461 118-432 (433)
127 1nir_A Nitrite reductase; hemo 100.0 5E-29 1.7E-33 255.7 37.6 312 161-501 144-513 (543)
128 2ecf_A Dipeptidyl peptidase IV 100.0 1.8E-28 6.1E-33 262.7 33.4 334 154-500 36-457 (741)
129 2hqs_A Protein TOLB; TOLB, PAL 100.0 1.4E-28 4.9E-33 244.7 29.2 302 153-484 61-410 (415)
130 1k32_A Tricorn protease; prote 100.0 9.8E-27 3.3E-31 258.0 32.8 322 145-501 43-460 (1045)
131 1k32_A Tricorn protease; prote 100.0 1.6E-26 5.5E-31 256.3 33.3 337 146-499 91-499 (1045)
132 1nir_A Nitrite reductase; hemo 99.9 4.2E-25 1.4E-29 226.6 35.1 294 147-471 172-524 (543)
133 2z3z_A Dipeptidyl aminopeptida 99.9 1.8E-25 6.1E-30 238.0 31.6 321 157-501 28-434 (706)
134 2hqs_A Protein TOLB; TOLB, PAL 99.9 8.2E-26 2.8E-30 224.8 25.7 272 215-500 64-385 (415)
135 1xfd_A DIP, dipeptidyl aminope 99.9 6.4E-26 2.2E-30 242.1 26.5 313 156-491 18-429 (723)
136 3vgz_A Uncharacterized protein 99.9 2.7E-23 9.4E-28 201.5 36.3 268 214-492 41-334 (353)
137 3u4y_A Uncharacterized protein 99.9 2.3E-23 7.8E-28 200.5 34.9 270 221-501 5-303 (331)
138 2ecf_A Dipeptidyl peptidase IV 99.9 1.6E-24 5.5E-29 232.0 28.8 277 213-501 36-412 (741)
139 1ri6_A Putative isomerase YBHE 99.9 2.1E-23 7.2E-28 201.3 32.8 292 168-485 7-336 (343)
140 2ojh_A Uncharacterized protein 99.9 2.2E-24 7.6E-29 203.2 25.2 253 230-493 17-293 (297)
141 3u4y_A Uncharacterized protein 99.9 2.9E-23 9.9E-28 199.8 32.9 276 161-464 4-307 (331)
142 1ri6_A Putative isomerase YBHE 99.9 2.1E-23 7.1E-28 201.3 30.1 265 227-501 7-307 (343)
143 2ojh_A Uncharacterized protein 99.9 1.4E-23 4.9E-28 197.6 26.7 241 145-452 32-293 (297)
144 2z3z_A Dipeptidyl aminopeptida 99.9 3.6E-23 1.2E-27 220.3 31.2 278 155-463 82-437 (706)
145 3o4h_A Acylamino-acid-releasin 99.9 7.2E-24 2.5E-28 220.5 24.7 266 213-499 21-312 (582)
146 1xfd_A DIP, dipeptidyl aminope 99.9 4.6E-24 1.6E-28 227.7 23.5 275 215-501 18-392 (723)
147 1pby_B Quinohemoprotein amine 99.9 1.5E-22 5.3E-27 194.7 30.7 270 226-501 2-309 (337)
148 3vgz_A Uncharacterized protein 99.9 2E-21 6.7E-26 188.4 35.9 271 153-452 39-335 (353)
149 2oit_A Nucleoporin 214KDA; NH2 99.9 5.6E-22 1.9E-26 197.9 30.1 254 154-460 36-332 (434)
150 1pby_B Quinohemoprotein amine 99.9 7.7E-22 2.6E-26 189.8 29.8 272 167-470 2-319 (337)
151 1z68_A Fibroblast activation p 99.9 7.9E-23 2.7E-27 218.1 24.8 314 159-500 20-441 (719)
152 2oit_A Nucleoporin 214KDA; NH2 99.9 2.2E-22 7.6E-27 200.8 25.0 245 214-499 37-330 (434)
153 3hfq_A Uncharacterized protein 99.9 8.6E-21 3E-25 183.8 34.4 249 214-501 40-316 (347)
154 3o4h_A Acylamino-acid-releasin 99.9 6.5E-22 2.2E-26 205.8 26.6 267 154-461 21-315 (582)
155 3hfq_A Uncharacterized protein 99.9 7.2E-21 2.5E-25 184.4 31.1 252 152-466 37-324 (347)
156 3scy_A Hypothetical bacterial 99.9 6E-20 2E-24 179.0 35.0 269 225-501 13-336 (361)
157 3pe7_A Oligogalacturonate lyas 99.9 1E-20 3.5E-25 186.1 29.7 310 146-500 22-380 (388)
158 1jmx_B Amine dehydrogenase; ox 99.9 1.3E-20 4.3E-25 182.3 29.0 274 159-472 4-336 (349)
159 1jmx_B Amine dehydrogenase; ox 99.9 2.3E-20 7.8E-25 180.5 28.9 270 218-501 4-324 (349)
160 4a5s_A Dipeptidyl peptidase 4 99.9 1.1E-20 3.6E-25 202.1 26.7 278 156-492 18-383 (740)
161 3scy_A Hypothetical bacterial 99.9 5E-19 1.7E-23 172.4 34.0 257 213-480 49-360 (361)
162 1z68_A Fibroblast activation p 99.9 2.1E-21 7E-26 207.2 18.2 271 218-501 20-390 (719)
163 1jof_A Carboxy-CIS,CIS-muconat 99.8 3.9E-18 1.3E-22 166.4 33.0 265 227-501 4-340 (365)
164 1jof_A Carboxy-CIS,CIS-muconat 99.8 1.4E-18 4.8E-23 169.6 29.3 248 153-463 38-343 (365)
165 3azo_A Aminopeptidase; POP fam 99.8 6.3E-19 2.2E-23 186.1 27.9 280 149-499 18-364 (662)
166 2oiz_A Aromatic amine dehydrog 99.8 2.3E-18 7.8E-23 167.6 29.5 289 165-484 14-360 (361)
167 3c5m_A Oligogalacturonate lyas 99.8 7E-19 2.4E-23 173.2 23.8 272 215-500 37-380 (396)
168 3fvz_A Peptidyl-glycine alpha- 99.8 1.7E-17 6E-22 159.4 31.6 247 213-501 23-321 (329)
169 1q7f_A NHL, brain tumor CG1071 99.8 4.5E-17 1.5E-21 153.1 33.1 236 212-501 28-279 (286)
170 3fvz_A Peptidyl-glycine alpha- 99.8 2.3E-17 7.8E-22 158.6 30.0 249 154-460 23-321 (329)
171 1q7f_A NHL, brain tumor CG1071 99.8 1.2E-16 4.1E-21 150.2 33.8 247 152-462 27-281 (286)
172 3c5m_A Oligogalacturonate lyas 99.8 9.5E-18 3.2E-22 165.1 23.8 277 156-463 37-386 (396)
173 2dg1_A DRP35, lactonase; beta 99.8 1.4E-16 4.9E-21 153.1 29.4 266 214-492 6-300 (333)
174 4a5s_A Dipeptidyl peptidase 4 99.8 2.5E-17 8.6E-22 175.9 25.1 318 147-499 49-446 (740)
175 1qks_A Cytochrome CD1 nitrite 99.8 2.5E-15 8.5E-20 153.8 38.1 310 164-501 165-537 (567)
176 2gop_A Trilobed protease; beta 99.8 3.8E-16 1.3E-20 150.9 30.5 258 156-464 16-333 (347)
177 2gop_A Trilobed protease; beta 99.8 2.5E-16 8.4E-21 152.2 29.0 255 215-500 16-329 (347)
178 3e5z_A Putative gluconolactona 99.8 7.5E-16 2.5E-20 145.5 28.4 233 214-499 28-283 (296)
179 2z2n_A Virginiamycin B lyase; 99.8 8.5E-14 2.9E-18 131.0 42.1 279 150-501 10-294 (299)
180 2oiz_A Aromatic amine dehydrog 99.7 1.4E-15 4.8E-20 147.9 30.3 270 148-443 45-360 (361)
181 3azo_A Aminopeptidase; POP fam 99.7 2.6E-16 8.9E-21 166.0 25.0 236 212-500 22-321 (662)
182 2dg1_A DRP35, lactonase; beta 99.7 1.8E-15 6.2E-20 145.3 27.8 265 155-451 6-300 (333)
183 2xdw_A Prolyl endopeptidase; a 99.7 2.8E-15 9.5E-20 159.4 30.4 253 214-500 125-412 (710)
184 2xdw_A Prolyl endopeptidase; a 99.7 2.8E-15 9.4E-20 159.4 30.0 244 152-463 122-416 (710)
185 3pe7_A Oligogalacturonate lyas 99.7 4.2E-16 1.4E-20 153.0 21.4 247 244-501 20-328 (388)
186 3e5z_A Putative gluconolactona 99.7 2.8E-14 9.4E-19 134.7 29.7 259 147-464 20-289 (296)
187 2bkl_A Prolyl endopeptidase; m 99.7 1.1E-15 3.7E-20 162.1 21.6 245 151-422 117-400 (695)
188 1rwi_B Serine/threonine-protei 99.7 1.8E-14 6.3E-19 133.7 26.8 235 256-501 25-263 (270)
189 3no2_A Uncharacterized protein 99.7 5.4E-14 1.9E-18 131.0 28.7 242 165-471 4-262 (276)
190 3dsm_A Uncharacterized protein 99.7 4.2E-14 1.4E-18 135.6 28.5 280 174-479 15-319 (328)
191 2bkl_A Prolyl endopeptidase; m 99.7 3.1E-15 1.1E-19 158.5 22.2 238 213-500 120-395 (695)
192 1rwi_B Serine/threonine-protei 99.7 2.8E-14 9.6E-19 132.5 25.9 240 215-464 25-267 (270)
193 3no2_A Uncharacterized protein 99.7 3.7E-14 1.3E-18 132.2 26.3 213 223-490 3-231 (276)
194 2qc5_A Streptogramin B lactona 99.6 3.7E-12 1.3E-16 119.8 37.9 272 213-501 19-299 (300)
195 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.7E-13 9.2E-18 128.7 29.3 239 214-501 18-298 (314)
196 3dsm_A Uncharacterized protein 99.6 4.1E-13 1.4E-17 128.7 30.5 253 233-500 15-300 (328)
197 1qks_A Cytochrome CD1 nitrite 99.6 1.3E-12 4.4E-17 133.7 34.2 267 223-501 165-476 (567)
198 2qc5_A Streptogramin B lactona 99.6 9.2E-12 3.2E-16 117.0 37.3 276 153-460 18-299 (300)
199 3sjl_D Methylamine dehydrogena 99.6 3.8E-13 1.3E-17 129.4 27.5 292 161-482 39-384 (386)
200 2z2n_A Virginiamycin B lyase; 99.6 9.3E-12 3.2E-16 116.9 36.7 234 214-500 15-253 (299)
201 1yr2_A Prolyl oligopeptidase; 99.6 1.8E-13 6.1E-18 146.1 27.4 266 223-500 116-439 (741)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 1.2E-12 4E-17 124.3 30.3 246 150-461 13-299 (314)
203 2mad_H Methylamine dehydrogena 99.6 8.3E-12 2.8E-16 121.4 35.9 275 162-468 28-357 (373)
204 3g4e_A Regucalcin; six bladed 99.5 1.1E-11 3.6E-16 117.0 29.8 228 216-491 15-261 (297)
205 2mad_H Methylamine dehydrogena 99.5 8.2E-11 2.8E-15 114.4 36.7 263 222-501 29-349 (373)
206 3hrp_A Uncharacterized protein 99.5 1.9E-11 6.3E-16 120.6 31.4 233 255-500 131-408 (409)
207 1yr2_A Prolyl oligopeptidase; 99.5 1.2E-12 4.1E-17 139.7 24.2 238 215-464 164-444 (741)
208 3hrp_A Uncharacterized protein 99.5 3.1E-11 1.1E-15 119.0 29.7 233 214-459 131-408 (409)
209 3c75_H MADH, methylamine dehyd 99.5 1.4E-11 4.6E-16 120.8 26.7 290 164-482 82-423 (426)
210 2ghs_A AGR_C_1268P; regucalcin 99.5 8.3E-11 2.8E-15 112.4 30.8 225 216-492 51-292 (326)
211 1xip_A Nucleoporin NUP159; bet 99.5 3.7E-12 1.3E-16 123.0 20.3 183 256-491 39-233 (388)
212 3dr2_A Exported gluconolactona 99.4 4.9E-11 1.7E-15 112.9 26.5 230 215-499 46-303 (305)
213 2qe8_A Uncharacterized protein 99.4 8.2E-12 2.8E-16 120.4 20.2 257 214-493 17-312 (343)
214 3sjl_D Methylamine dehydrogena 99.4 9.4E-11 3.2E-15 112.8 26.3 267 220-501 39-362 (386)
215 3iuj_A Prolyl endopeptidase; h 99.4 1.7E-11 5.9E-16 129.6 22.7 235 253-500 127-403 (693)
216 3g4e_A Regucalcin; six bladed 99.4 3.8E-10 1.3E-14 106.3 29.7 226 153-449 11-260 (297)
217 1xip_A Nucleoporin NUP159; bet 99.4 8E-12 2.7E-16 120.7 18.0 166 215-392 39-226 (388)
218 3dr2_A Exported gluconolactona 99.4 1.2E-10 4.2E-15 110.1 24.9 238 143-455 33-301 (305)
219 3iuj_A Prolyl endopeptidase; h 99.4 5.4E-11 1.9E-15 125.8 24.6 242 151-422 125-408 (693)
220 3c75_H MADH, methylamine dehyd 99.4 1.3E-10 4.4E-15 113.8 25.0 264 223-501 82-401 (426)
221 2ghs_A AGR_C_1268P; regucalcin 99.4 1.9E-09 6.3E-14 103.0 32.0 219 156-449 50-290 (326)
222 3hxj_A Pyrrolo-quinoline quino 99.4 6.9E-11 2.4E-15 112.8 21.0 298 159-500 24-322 (330)
223 3q7m_A Lipoprotein YFGL, BAMB; 99.3 2.5E-09 8.5E-14 104.2 32.3 303 165-499 52-375 (376)
224 2hz6_A Endoplasmic reticulum t 99.3 2.8E-14 9.7E-19 139.0 -3.7 257 224-501 8-278 (369)
225 2qe8_A Uncharacterized protein 99.3 9.3E-11 3.2E-15 112.9 20.6 269 155-458 17-318 (343)
226 1yiq_A Quinohemoprotein alcoho 99.3 6.1E-10 2.1E-14 117.1 27.1 304 166-490 70-537 (689)
227 1kb0_A Quinohemoprotein alcoho 99.3 8.7E-10 3E-14 115.7 27.0 302 166-488 77-536 (677)
228 1mda_H Methylamine dehydrogena 99.3 2.7E-10 9.4E-15 109.7 21.3 246 218-482 69-367 (368)
229 1kb0_A Quinohemoprotein alcoho 99.3 4.3E-10 1.5E-14 118.0 24.5 269 225-501 77-506 (677)
230 1yiq_A Quinohemoprotein alcoho 99.3 1E-09 3.5E-14 115.4 26.3 269 225-501 70-504 (689)
231 2hz6_A Endoplasmic reticulum t 99.2 8.2E-12 2.8E-16 121.5 7.5 203 265-485 8-217 (369)
232 3q7m_A Lipoprotein YFGL, BAMB; 99.1 3.1E-08 1.1E-12 96.3 27.9 259 225-500 53-335 (376)
233 1npe_A Nidogen, entactin; glyc 99.1 2.3E-07 8E-12 85.5 30.8 246 227-484 3-263 (267)
234 3hxj_A Pyrrolo-quinoline quino 99.1 1.6E-08 5.3E-13 96.3 22.6 218 225-461 107-324 (330)
235 1mda_H Methylamine dehydrogena 99.1 7.5E-09 2.6E-13 99.6 20.1 243 236-501 47-345 (368)
236 2ece_A 462AA long hypothetical 99.1 6E-08 2.1E-12 94.0 26.0 219 264-490 93-399 (462)
237 4a2l_A BT_4663, two-component 99.1 3.6E-06 1.2E-10 90.4 43.0 310 157-501 175-525 (795)
238 4a2l_A BT_4663, two-component 99.0 8.9E-06 3E-10 87.3 44.0 315 154-500 214-569 (795)
239 1kv9_A Type II quinohemoprotei 99.0 7.9E-08 2.7E-12 100.7 24.4 269 225-501 66-487 (668)
240 1kv9_A Type II quinohemoprotei 98.9 3.1E-07 1.1E-11 96.2 26.9 306 166-491 66-521 (668)
241 2iwa_A Glutamine cyclotransfer 98.9 2.5E-07 8.7E-12 84.2 22.6 193 257-461 23-237 (266)
242 2ad6_A Methanol dehydrogenase 98.9 7.1E-07 2.4E-11 91.6 26.7 267 226-501 63-493 (571)
243 2iwa_A Glutamine cyclotransfer 98.9 8.4E-07 2.9E-11 80.7 24.2 190 299-501 23-236 (266)
244 1w6s_A Methanol dehydrogenase 98.9 8.4E-07 2.9E-11 91.1 27.0 269 226-501 63-502 (599)
245 2ad6_A Methanol dehydrogenase 98.9 1.4E-06 4.8E-11 89.4 28.3 262 225-489 115-524 (571)
246 2fp8_A Strictosidine synthase; 98.9 1.5E-06 5.2E-11 82.4 26.1 236 216-501 21-312 (322)
247 3nol_A Glutamine cyclotransfer 98.8 8.6E-07 2.9E-11 79.7 22.0 180 257-450 45-244 (262)
248 2ece_A 462AA long hypothetical 98.8 5.2E-07 1.8E-11 87.4 21.8 183 308-500 97-350 (462)
249 3v9f_A Two-component system se 98.8 5.4E-05 1.9E-09 81.0 39.9 315 155-499 163-521 (781)
250 1w6s_A Methanol dehydrogenase 98.8 2.9E-06 1E-10 87.1 28.6 259 228-490 124-535 (599)
251 1fwx_A Nitrous oxide reductase 98.8 6.9E-07 2.4E-11 89.6 23.0 238 224-491 100-407 (595)
252 3v9f_A Two-component system se 98.8 6.6E-05 2.3E-09 80.3 40.3 314 155-499 211-565 (781)
253 1fwx_A Nitrous oxide reductase 98.8 7.2E-07 2.5E-11 89.5 22.2 183 308-501 103-360 (595)
254 2fp8_A Strictosidine synthase; 98.8 7.1E-06 2.4E-10 77.7 28.2 265 150-460 14-312 (322)
255 1npe_A Nidogen, entactin; glyc 98.8 1.8E-05 6.3E-10 72.6 30.1 222 268-500 3-236 (267)
256 1flg_A Protein (quinoprotein e 98.8 4.4E-05 1.5E-09 78.4 35.6 82 408-490 464-548 (582)
257 2p4o_A Hypothetical protein; p 98.8 1.7E-05 5.7E-10 74.6 29.6 226 214-492 32-278 (306)
258 2xbg_A YCF48-like protein; pho 98.7 9.3E-05 3.2E-09 70.2 33.1 265 214-499 36-319 (327)
259 1k3i_A Galactose oxidase precu 98.7 1.2E-06 4E-11 91.9 21.6 269 159-450 190-530 (656)
260 3nol_A Glutamine cyclotransfer 98.7 4.2E-06 1.4E-10 75.2 21.9 189 288-491 33-244 (262)
261 3nok_A Glutaminyl cyclase; bet 98.7 7.1E-06 2.4E-10 73.7 23.1 189 288-490 45-253 (268)
262 3nok_A Glutaminyl cyclase; bet 98.7 3.5E-06 1.2E-10 75.7 21.0 179 256-449 56-253 (268)
263 3mbr_X Glutamine cyclotransfer 98.7 1.1E-05 3.8E-10 71.9 23.9 180 256-449 22-222 (243)
264 1flg_A Protein (quinoprotein e 98.6 1.9E-05 6.5E-10 81.1 27.3 229 266-501 117-515 (582)
265 3v64_C Agrin; beta propeller, 98.6 0.00018 6.1E-09 68.8 32.2 243 216-469 36-283 (349)
266 3mbr_X Glutamine cyclotransfer 98.6 3.9E-05 1.3E-09 68.4 24.8 179 299-491 23-223 (243)
267 3v65_B Low-density lipoprotein 98.6 0.00014 4.9E-09 70.6 30.3 242 217-469 80-326 (386)
268 2xe4_A Oligopeptidase B; hydro 98.5 2.5E-05 8.6E-10 83.0 24.9 196 151-366 169-398 (751)
269 3tc9_A Hypothetical hydrolase; 98.5 0.00015 5E-09 71.6 28.1 237 215-501 138-429 (430)
270 1k3i_A Galactose oxidase precu 98.4 3.6E-05 1.2E-09 80.5 24.0 265 218-491 190-530 (656)
271 1ijq_A LDL receptor, low-densi 98.4 0.0013 4.5E-08 61.8 33.7 224 235-468 10-245 (316)
272 2p4o_A Hypothetical protein; p 98.4 0.00034 1.2E-08 65.5 28.1 217 155-392 32-270 (306)
273 3s94_A LRP-6, low-density lipo 98.4 0.0013 4.3E-08 68.0 33.0 327 154-500 39-421 (619)
274 3p5b_L Low density lipoprotein 98.4 0.002 6.7E-08 62.8 32.8 233 227-469 85-328 (400)
275 2xe4_A Oligopeptidase B; hydro 98.3 3.3E-05 1.1E-09 82.1 21.2 222 215-488 175-440 (751)
276 4hw6_A Hypothetical protein, I 98.3 0.00034 1.2E-08 68.9 26.6 233 257-501 141-432 (433)
277 3sov_A LRP-6, low-density lipo 98.3 0.0017 5.9E-08 61.0 29.8 226 234-468 12-245 (318)
278 1ijq_A LDL receptor, low-densi 98.3 0.0026 9E-08 59.7 31.4 212 276-499 10-235 (316)
279 3v64_C Agrin; beta propeller, 98.3 0.0015 5.1E-08 62.3 29.8 213 276-499 53-272 (349)
280 2xbg_A YCF48-like protein; pho 98.3 0.0028 9.6E-08 59.8 33.6 269 155-458 36-319 (327)
281 3v65_B Low-density lipoprotein 98.3 0.00087 3E-08 65.0 27.5 221 268-499 89-315 (386)
282 3p5b_L Low density lipoprotein 98.2 0.0032 1.1E-07 61.3 29.9 221 268-499 85-317 (400)
283 3qqz_A Putative uncharacterize 98.2 0.0029 1E-07 57.0 27.1 200 249-459 21-251 (255)
284 3tc9_A Hypothetical hydrolase; 98.2 0.002 6.8E-08 63.4 28.0 153 156-367 138-300 (430)
285 4hw6_A Hypothetical protein, I 98.1 0.0045 1.5E-07 60.9 30.1 233 215-460 140-432 (433)
286 3m0c_C LDL receptor, low-densi 98.1 0.0066 2.3E-07 64.2 32.0 226 234-468 403-639 (791)
287 3kya_A Putative phosphatase; s 98.1 0.0042 1.4E-07 61.5 28.0 240 215-501 140-474 (496)
288 3amr_A 3-phytase; beta-propell 98.0 0.0028 9.5E-08 59.5 24.6 192 265-469 39-272 (355)
289 3amr_A 3-phytase; beta-propell 98.0 0.002 6.9E-08 60.4 22.8 181 309-501 42-262 (355)
290 3sov_A LRP-6, low-density lipo 98.0 0.008 2.7E-07 56.4 27.3 216 275-500 12-236 (318)
291 2ism_A Putative oxidoreductase 98.0 0.0064 2.2E-07 58.0 26.9 59 432-491 269-334 (352)
292 2p9w_A MAL S 1 allergenic prot 97.9 0.00083 2.8E-08 62.4 19.1 157 335-501 10-214 (334)
293 3kya_A Putative phosphatase; s 97.9 0.023 7.7E-07 56.3 29.1 113 157-284 141-277 (496)
294 3m0c_C LDL receptor, low-densi 97.8 0.017 5.8E-07 61.1 29.5 216 275-499 403-629 (791)
295 1n7d_A LDL receptor, low-densi 97.8 0.00018 6.1E-09 75.6 14.4 226 235-469 386-622 (699)
296 3ei3_A DNA damage-binding prot 97.8 0.074 2.5E-06 58.8 37.2 321 154-501 553-954 (1158)
297 3qqz_A Putative uncharacterize 97.8 0.019 6.6E-07 51.6 25.2 196 150-364 22-249 (255)
298 3a9g_A Putative uncharacterize 97.7 0.022 7.7E-07 54.2 25.4 60 431-490 259-330 (354)
299 4a0p_A LRP6, LRP-6, low-densit 97.7 0.069 2.3E-06 55.1 31.9 221 233-464 13-240 (628)
300 2g8s_A Glucose/sorbosone dehyd 97.6 0.055 1.9E-06 51.5 27.3 66 431-496 271-348 (353)
301 1n7d_A LDL receptor, low-densi 97.5 0.00053 1.8E-08 72.0 12.3 216 274-499 384-611 (699)
302 2ism_A Putative oxidoreductase 97.4 0.09 3.1E-06 49.9 29.3 103 155-272 31-152 (352)
303 2p9w_A MAL S 1 allergenic prot 97.3 0.03 1E-06 52.0 19.9 188 301-497 17-260 (334)
304 3sre_A PON1, serum paraoxonase 97.2 0.097 3.3E-06 49.5 22.8 101 339-451 166-287 (355)
305 3sre_A PON1, serum paraoxonase 97.2 0.047 1.6E-06 51.7 20.3 155 340-501 52-251 (355)
306 3s94_A LRP-6, low-density lipo 97.0 0.36 1.2E-05 49.6 39.9 308 155-489 84-452 (619)
307 3a9g_A Putative uncharacterize 97.0 0.23 7.8E-06 47.1 27.3 101 155-272 29-152 (354)
308 3pbp_A Nucleoporin NUP82; beta 96.8 0.14 4.8E-06 49.1 19.5 111 339-457 67-208 (452)
309 2vpj_A Kelch-like protein 12; 96.7 0.093 3.2E-06 48.3 17.7 209 276-501 31-277 (301)
310 4a0p_A LRP6, LRP-6, low-densit 96.7 0.72 2.5E-05 47.4 45.7 151 155-323 80-234 (628)
311 2vpj_A Kelch-like protein 12; 96.6 0.18 6.2E-06 46.3 18.9 223 224-463 14-280 (301)
312 2xzh_A Clathrin heavy chain 1; 96.5 0.5 1.7E-05 43.6 31.1 225 261-495 73-325 (365)
313 1cru_A Protein (soluble quinop 96.4 0.45 1.6E-05 46.8 20.9 109 338-450 27-163 (454)
314 2xn4_A Kelch-like protein 2; s 96.3 0.29 9.8E-06 45.0 18.6 223 225-463 16-278 (302)
315 3ii7_A Kelch-like protein 7; p 96.2 0.51 1.8E-05 43.4 19.6 221 226-463 13-274 (306)
316 2xn4_A Kelch-like protein 2; s 96.2 0.28 9.5E-06 45.1 17.7 209 276-501 30-275 (302)
317 3das_A Putative oxidoreductase 96.2 0.39 1.3E-05 45.2 18.5 152 333-489 27-219 (347)
318 2g8s_A Glucose/sorbosone dehyd 96.2 0.88 3E-05 43.0 25.3 54 339-392 272-335 (353)
319 3ii7_A Kelch-like protein 7; p 96.2 0.37 1.3E-05 44.3 18.4 217 268-501 14-271 (306)
320 4asc_A Kelch repeat and BTB do 96.1 0.74 2.5E-05 42.5 20.4 219 227-463 7-279 (315)
321 1bpo_A Protein (clathrin); cla 96.1 1.1 3.8E-05 43.1 33.3 226 260-495 71-324 (494)
322 2be1_A Serine/threonine-protei 96.0 0.032 1.1E-06 52.4 10.1 193 267-466 11-236 (339)
323 3ei3_A DNA damage-binding prot 96.0 2.5 8.5E-05 46.8 38.1 305 163-500 283-634 (1158)
324 4asc_A Kelch repeat and BTB do 95.9 0.6 2E-05 43.2 18.3 204 269-492 8-253 (315)
325 1tl2_A L10, protein (tachylect 95.7 0.43 1.5E-05 41.4 14.9 139 339-495 42-203 (236)
326 3qhy_B Beta-lactamase inhibito 95.4 0.86 2.9E-05 41.5 16.9 220 215-461 25-246 (282)
327 1zgk_A Kelch-like ECH-associat 95.3 1.3 4.3E-05 40.8 18.2 225 223-463 23-289 (308)
328 3pbp_A Nucleoporin NUP82; beta 95.3 0.25 8.5E-06 47.4 13.0 125 156-282 67-209 (452)
329 1xi4_A Clathrin heavy chain; a 95.3 2.7 9.2E-05 46.8 22.4 197 260-466 71-294 (1630)
330 2xzh_A Clathrin heavy chain 1; 95.2 1.9 6.5E-05 39.8 28.0 204 160-385 72-307 (365)
331 1bpo_A Protein (clathrin); cla 95.0 2.7 9.1E-05 40.5 26.5 206 159-386 70-307 (494)
332 2woz_A Kelch repeat and BTB do 95.0 1.7 5.9E-05 40.0 18.4 179 269-463 19-233 (318)
333 2woz_A Kelch repeat and BTB do 95.0 2.2 7.4E-05 39.3 19.0 140 227-371 18-187 (318)
334 1zgk_A Kelch-like ECH-associat 94.9 0.97 3.3E-05 41.6 16.1 209 276-501 39-286 (308)
335 2be1_A Serine/threonine-protei 94.9 0.84 2.9E-05 42.7 15.3 188 226-424 11-236 (339)
336 1tl2_A L10, protein (tachylect 94.7 1.4 4.8E-05 38.2 14.9 99 340-453 90-202 (236)
337 1xi4_A Clathrin heavy chain; a 94.3 2.7 9.2E-05 46.8 19.4 204 160-385 71-306 (1630)
338 3ott_A Two-component system se 94.3 6.2 0.00021 41.4 43.1 266 213-499 145-445 (758)
339 2uvk_A YJHT; unknown function, 93.6 1.2 4.3E-05 41.8 14.2 39 453-492 286-326 (357)
340 3qhy_B Beta-lactamase inhibito 93.5 4.3 0.00015 36.8 19.8 181 215-419 64-246 (282)
341 3ott_A Two-component system se 93.2 9.5 0.00032 40.0 41.1 312 155-500 146-500 (758)
342 1cru_A Protein (soluble quinop 93.1 7 0.00024 38.2 28.0 102 256-357 28-163 (454)
343 2zwa_A Leucine carboxyl methyl 92.3 5.2 0.00018 41.6 17.7 191 264-464 396-638 (695)
344 3das_A Putative oxidoreductase 91.7 8.5 0.00029 36.0 29.4 112 149-273 26-158 (347)
345 2uvk_A YJHT; unknown function, 90.9 3.4 0.00012 38.7 13.4 16 276-291 168-183 (357)
346 2zwa_A Leucine carboxyl methyl 90.5 10 0.00034 39.4 17.5 148 223-370 396-579 (695)
347 2wg3_C Hedgehog-interacting pr 89.8 16 0.00054 35.7 24.4 104 256-359 15-160 (463)
348 3sbq_A Nitrous-oxide reductase 89.5 0.86 2.9E-05 45.2 7.7 89 412-501 300-407 (638)
349 3sbq_A Nitrous-oxide reductase 88.1 1.5 5.3E-05 43.5 8.4 98 383-489 326-452 (638)
350 3s25_A Hypothetical 7-bladed b 86.6 19 0.00064 32.8 24.5 139 220-369 59-217 (302)
351 3s25_A Hypothetical 7-bladed b 86.5 19 0.00065 32.8 25.1 235 223-490 23-280 (302)
352 4gq2_M Nucleoporin NUP120; bet 75.4 14 0.00049 39.9 10.9 37 432-468 237-273 (950)
353 4hvt_A Ritya.17583.B, post-pro 73.0 92 0.0031 32.2 21.9 225 262-499 137-427 (711)
354 3b7f_A Glycosyl hydrolase, BNR 69.0 77 0.0026 29.7 25.8 50 226-276 23-77 (394)
355 3zwu_A Alkaline phosphatase PH 65.9 26 0.00088 35.4 9.5 58 432-489 477-548 (592)
356 4a9v_A PHOX; hydrolase, beta-p 64.9 28 0.00095 34.9 9.3 60 431-490 476-549 (592)
357 4gq2_M Nucleoporin NUP120; bet 56.3 14 0.00048 39.9 6.1 37 339-375 237-273 (950)
358 2wg3_C Hedgehog-interacting pr 54.5 1.6E+02 0.0054 28.5 25.9 51 215-265 15-79 (463)
359 3f7f_A Nucleoporin NUP120; nuc 54.2 22 0.00074 36.7 6.6 37 431-469 222-258 (729)
360 4fhn_B Nucleoporin NUP120; pro 51.5 11 0.00038 41.7 4.4 37 432-468 239-275 (1139)
361 4fhn_B Nucleoporin NUP120; pro 45.2 16 0.00054 40.4 4.4 37 339-375 239-275 (1139)
362 3b7f_A Glycosyl hydrolase, BNR 45.0 1.9E+02 0.0067 26.8 25.7 76 213-289 54-151 (394)
363 3q6k_A 43.2 kDa salivary prote 39.7 2.4E+02 0.0083 26.4 23.1 162 277-449 124-342 (381)
364 3f7f_A Nucleoporin NUP120; nuc 39.1 45 0.0015 34.3 6.2 37 256-294 223-259 (729)
365 4hvt_A Ritya.17583.B, post-pro 37.0 3.7E+02 0.013 27.7 21.8 237 157-418 131-429 (711)
366 3zwu_A Alkaline phosphatase PH 35.0 1.7E+02 0.0057 29.4 9.6 38 411-448 510-548 (592)
367 4a9v_A PHOX; hydrolase, beta-p 34.0 1.7E+02 0.0059 29.2 9.2 60 381-448 477-548 (592)
368 1wp5_A Topoisomerase IV; broke 28.7 3.3E+02 0.011 24.7 15.3 144 347-500 3-172 (323)
369 3uc1_A DNA gyrase subunit A; D 25.5 3.8E+02 0.013 24.3 23.4 141 348-499 108-276 (327)
370 3no0_A DNA gyrase subunit A; D 23.4 3.8E+02 0.013 23.6 18.5 139 348-497 79-239 (276)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.5e-49 Score=396.04 Aligned_cols=297 Identities=29% Similarity=0.497 Sum_probs=261.5
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...+.+|..+|++++|+|++.+|+||+.|++|+|||+.++... +. ...|...|.+++|+|+++
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~-------------~~----l~~h~~~V~~v~~~~~~~ 163 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFE-------------RT----LKGHTDSVQDISFDHSGK 163 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCC-------------EE----ECCCSSCEEEEEECTTSS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-------------EE----EeccCCcEEEEEEcCCCC
Confidence 4568899999999999999999999999999999999876421 11 234678899999999999
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|++|+.|++|++||..+ .....+.+|...|++++|+|++++|++|+.|++|++||++++.++
T Consensus 164 ~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~---------------- 227 (410)
T 1vyh_C 164 LLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV---------------- 227 (410)
T ss_dssp EEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE----------------
T ss_pred EEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE----------------
Confidence 999999999999999875 556778899999999999999999999999999999999876532
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.+...+..|...|.++
T Consensus 228 -------------------------~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~ 282 (410)
T 1vyh_C 228 -------------------------KTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECI 282 (410)
T ss_dssp -------------------------EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEE
T ss_pred -------------------------EEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEE
Confidence 3456788889999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCC-----------CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 010759 386 RWSPTGSGT-----------NNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 386 ~~sp~g~~~-----------~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i 454 (502)
+|+|++... .......+|++|+.|++|++||++++.++..+.+|...|++++|+|+|++|++|+.||.|
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i 362 (410)
T 1vyh_C 283 SWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL 362 (410)
T ss_dssp EECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE
T ss_pred EEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE
Confidence 999974210 000012378999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 455 HIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 455 ~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++||+.+++.+.++.++ ..|.+++|+|++.+||+|+.|++|+||++|
T Consensus 363 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 363 RVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEECCTTSCCCEEEECCSSCEEEEEECSSSSCEEEEETTSEEEEEC--
T ss_pred EEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEeCC
Confidence 99999999988888765 469999999999999999999999999986
No 2
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.1e-48 Score=406.37 Aligned_cols=332 Identities=23% Similarity=0.348 Sum_probs=280.5
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
....+|.+|...|++++|||+|++||||+.|++|+|||+.++... .... ...|..+|.+++|+|+
T Consensus 50 ~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~-----------~~~~----~~~~~~~v~~v~fs~d 114 (611)
T 1nr0_A 50 TDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHI-----------LKTT----IPVFSGPVKDISWDSE 114 (611)
T ss_dssp SCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCC-----------EEEE----EECSSSCEEEEEECTT
T ss_pred ccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcce-----------eeEe----ecccCCceEEEEECCC
Confidence 446788999999999999999999999999999999998654311 0111 1235678999999999
Q ss_pred CCEEEEEECC----CcEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 225 GTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 225 ~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
|++|++++.+ +.|++|+.. .....+.+|...|++++|+|++. .|++|+.|++|++||..++++...+..|...+
T Consensus 115 g~~l~~~~~~~~~~~~v~~wd~~-~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V 193 (611)
T 1nr0_A 115 SKRIAAVGEGRERFGHVFLFDTG-TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFV 193 (611)
T ss_dssp SCEEEEEECCSSCSEEEEETTTC-CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCE
T ss_pred CCEEEEEECCCCceeEEEEeeCC-CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCce
Confidence 9999999876 478999853 44567889999999999999986 69999999999999999999889999999999
Q ss_pred EEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeec-------CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 300 LDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 300 ~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
.++.|.++ ..+++++.|++|++|+...+.++..+. +|.+.|.+++|+|++++|++|+.|++|++||+.++++
T Consensus 194 ~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~ 273 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKV 273 (611)
T ss_dssp EEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 99999754 567899999999999999888877774 7999999999999999999999999999999987765
Q ss_pred ee-------------------------------------------ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 372 VH-------------------------------------------DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 372 ~~-------------------------------------------~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
+. .+.+|...|++++|+|++. +|++++.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~---------~l~s~s~ 344 (611)
T 1nr0_A 274 EKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK---------TLFSADA 344 (611)
T ss_dssp EEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---------EEEEEET
T ss_pred eeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC---------EEEEEeC
Confidence 43 2346888999999999986 7899999
Q ss_pred CCeEEEEeCCCCeEEEEe-e------------------------------------------------------------
Q 010759 409 DSTVKLWDVELGKLLYSL-N------------------------------------------------------------ 427 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~-~------------------------------------------------------------ 427 (502)
|++|++||+.++.....+ .
T Consensus 345 D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 424 (611)
T 1nr0_A 345 EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGD 424 (611)
T ss_dssp TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSS
T ss_pred CCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCc
Confidence 999999998766543221 0
Q ss_pred ---------------------CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEEecCCCEEEEEECCCCC
Q 010759 428 ---------------------GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTYTGNGGIFEVCWNKEGD 484 (502)
Q Consensus 428 ---------------------~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~~~~~i~~~~ws~~g~ 484 (502)
.|...+++++|+|||++||+|+.|++|++|++.++.+ +....+...|.+++|+|+|+
T Consensus 425 ~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg~ 504 (611)
T 1nr0_A 425 IAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGA 504 (611)
T ss_dssp CEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSS
T ss_pred EEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCCC
Confidence 1234578899999999999999999999999987754 34444556799999999999
Q ss_pred EEEEEECCCeEEEEEee
Q 010759 485 KIAACFANHTVCVLDFR 501 (502)
Q Consensus 485 ~la~~~~~~~v~v~~~~ 501 (502)
+||+++.|++|.+||+.
T Consensus 505 ~las~s~d~~v~~w~~~ 521 (611)
T 1nr0_A 505 FLVATDQSRKVIPYSVA 521 (611)
T ss_dssp EEEEEETTSCEEEEEGG
T ss_pred EEEEEcCCCCEEEEEcC
Confidence 99999999999999974
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.9e-48 Score=372.03 Aligned_cols=289 Identities=22% Similarity=0.388 Sum_probs=255.7
Q ss_pred eeccccccceeEEEECCC----CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 148 TILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd----~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
..+.+|.++|++++|+|+ +.+|+|||.|++|+||++.++.. .... ...+|...|.+++|++
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~-----------~~~~----~l~gh~~~v~~~~~~~ 90 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL-----------DLQW----SLEGHQLGVVSVDISH 90 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE-----------EEEE----EECCCSSCEEEEEECS
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe-----------eeee----eeccCCCCEEEEEECC
Confidence 456799999999999985 56999999999999999865321 1111 1235678899999999
Q ss_pred CCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 224 EGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
++.++++|+.|+.|++||+.. .....+..|...+++++|+|++++|++|+.|++|++||+.++...
T Consensus 91 ~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~------------- 157 (321)
T 3ow8_A 91 TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKE------------- 157 (321)
T ss_dssp SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEE-------------
T ss_pred CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCcee-------------
Confidence 999999999999999999864 556678889999999999999999999999999999999876432
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcE
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEI 382 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i 382 (502)
..+..|...|.+++|+|++++|++|+.||.|++||+.+++.+..+..|..+|
T Consensus 158 ----------------------------~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v 209 (321)
T 3ow8_A 158 ----------------------------YSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAMPI 209 (321)
T ss_dssp ----------------------------EEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCC
T ss_pred ----------------------------EEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCCce
Confidence 2334566779999999999999999999999999999999999999999999
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
.+++|+|++. +|++|+.||+|++||++.++.+..+.+|...|++++|+|++++|++|+.|++|+|||+.++
T Consensus 210 ~~l~~spd~~---------~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~ 280 (321)
T 3ow8_A 210 RSLTFSPDSQ---------LLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTR 280 (321)
T ss_dssp CEEEECTTSC---------EEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTT
T ss_pred eEEEEcCCCC---------EEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Confidence 9999999986 7999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 463 KIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 463 ~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+.++.++ ..|.+++|+|+|++|++++.|++|+|||+-
T Consensus 281 ~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 281 TCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp EEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred EEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999998764 569999999999999999999999999963
No 4
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-47 Score=382.77 Aligned_cols=333 Identities=26% Similarity=0.535 Sum_probs=292.0
Q ss_pred ccccceeEEEECCCCC-EEEEEeCCCcEEEEec----CCCCCCCCCCCCCceEEEEEeeeccc------ccCCCCeEEEE
Q 010759 152 GHTSEVCACAWSPAGS-LLASGSGDSTARIWTI----ADGTSNGGAQNGPLNVLVLKHVKGRT------NEKSKDVTTLD 220 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~----~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~V~~l~ 220 (502)
.|..+|++++|+|+|+ +||+|+.|+.|++|++ .++.... .......+.... ..|...|++++
T Consensus 43 ~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (425)
T 1r5m_A 43 VKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYW-------KLTIIAELRHPFALSASSGKTTNQVTCLA 115 (425)
T ss_dssp EECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CE-------EEEEEEEEECCCCCC------CBCEEEEE
T ss_pred eccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccc-------cccccccccccccccccccCCCCceEEEE
Confidence 4569999999999999 9999999999999999 6554210 000111111111 12466899999
Q ss_pred ECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC--
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP-- 298 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~-- 298 (502)
|+|++++|++|+.||.|++|+..+.....+..|..+|++++|+|++++|++++.|+.|++||+.+++....+..+...
T Consensus 116 ~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 116 WSHDGNSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 999999999999999999999888888889999999999999999999999999999999999999988888777665
Q ss_pred -------------eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 299 -------------TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 299 -------------~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
+.++.|.++..+++++.++.|++|++....++..+.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d 275 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWH 275 (425)
T ss_dssp ----------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEC
T ss_pred ceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEE
Confidence 7778887788899999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEE
Q 010759 366 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYL 445 (502)
Q Consensus 366 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~l 445 (502)
+.+++.+..+..|...+.+++|+|++ ++++++.||.|++||+.+++.+..+..|..+|++++|+|++++|
T Consensus 276 ~~~~~~~~~~~~~~~~i~~~~~~~~~----------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 345 (425)
T 1r5m_A 276 GGNGNSQNCFYGHSQSIVSASWVGDD----------KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKY 345 (425)
T ss_dssp SSSBSCSEEECCCSSCEEEEEEETTT----------EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEE
T ss_pred CCCCccceEecCCCccEEEEEECCCC----------EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEE
Confidence 99999999998999999999999976 58899999999999999999999999999999999999999999
Q ss_pred EEEeCCCcEEEEeCCCCe--------------------eEEEEecC--C-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 446 ASGSLDKSMHIWSLKEGK--------------------IVKTYTGN--G-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~~--------------------~~~~~~~~--~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++|+.||.|++|++.+++ .+..+..+ + .|.+++|+|+|++||+++.||.|+|||++
T Consensus 346 ~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 346 AVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred EEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 999999999999999888 78888765 5 89999999999999999999999999985
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-47 Score=371.32 Aligned_cols=288 Identities=23% Similarity=0.387 Sum_probs=254.2
Q ss_pred CCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 144 NSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 144 ~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
.....+|++|...|++++|+|++++|+||+.||+|+|||+.++.. +..+ ..+...|.+++|+|
T Consensus 45 ~~~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~-------------~~~~----~~~~~~v~~~~~s~ 107 (340)
T 1got_B 45 MRTRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNK-------------VHAI----PLRSSWVMTCAYAP 107 (340)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-------------EEEE----ECSSSCEEEEEECT
T ss_pred chhheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCc-------------ceEe----ecCCccEEEEEECC
Confidence 344578999999999999999999999999999999999876532 1111 23467899999999
Q ss_pred CCCEEEEEECCCcEEEEECCCc-----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 224 EGTLLATGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
++++|++|+.|+.|++|++... ....+.+|.+.|.++.|++++ .+++++.|++|++||+.+++.
T Consensus 108 ~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~l~s~s~d~~i~~wd~~~~~~---------- 176 (340)
T 1got_B 108 SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN-QIVTSSGDTTCALWDIETGQQ---------- 176 (340)
T ss_dssp TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT-EEEEEETTSCEEEEETTTTEE----------
T ss_pred CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC-cEEEEECCCcEEEEECCCCcE----------
Confidence 9999999999999999997642 345678999999999999876 589999999999999987643
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 378 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 378 (502)
+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++.++..+..|
T Consensus 177 -------------------------------~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h 225 (340)
T 1got_B 177 -------------------------------TTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGH 225 (340)
T ss_dssp -------------------------------EEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCC
T ss_pred -------------------------------EEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCC
Confidence 2345678899999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEECCCCCEEEEEeCCCcEEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASGSLDKSMHI 456 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasgs~Dg~i~i 456 (502)
...|.+++|+|++. +|++|+.||+|++||+++++.+..+.. +...|++++|+|+|++|++|+.||.|++
T Consensus 226 ~~~v~~v~~~p~~~---------~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~v 296 (340)
T 1got_B 226 ESDINAICFFPNGN---------AFATGSDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV 296 (340)
T ss_dssp SSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred cCCEEEEEEcCCCC---------EEEEEcCCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEE
Confidence 99999999999986 799999999999999999988877653 3357999999999999999999999999
Q ss_pred EeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 457 WSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 457 w~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
||+.+++.+..+.++ ..|.+++|+|+|.+||+|+.|++|+|||
T Consensus 297 wd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 297 WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EETTTCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred EEcccCcEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccEEecC
Confidence 999999988888765 5699999999999999999999999997
No 6
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.7e-47 Score=399.25 Aligned_cols=327 Identities=19% Similarity=0.322 Sum_probs=271.8
Q ss_pred eeeccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
...+.+|...|++++|+|++. +|+||+.|++|++|+..++. .... ..+|...|.+++|+|+|
T Consensus 140 ~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~-------------~~~~----l~~H~~~V~~v~fspdg 202 (611)
T 1nr0_A 140 NGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK-------------FKST----FGEHTKFVHSVRYNPDG 202 (611)
T ss_dssp CBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE-------------EEEE----ECCCSSCEEEEEECTTS
T ss_pred cceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe-------------Eeee----eccccCceEEEEECCCC
Confidence 456889999999999999987 69999999999999975432 1122 23467889999999999
Q ss_pred CEEEEEECCCcEEEEECC-CceeEeec-------CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeec--
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTLS-------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFH-- 295 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~~-------~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~-- 295 (502)
++|++|+.|++|++|+.. +.....+. +|.+.|++++|+|++.+|++|+.|++|++||+.++++...+..+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~ 282 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTR 282 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCC
Confidence 999999999999999975 44445553 79999999999999999999999999999999999888777543
Q ss_pred -ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 296 -SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 296 -~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
......+.| ....+++++.|+.+++|+.....+...+.+|...|.+++|+|+|++|++++.|++|++||+.++.....
T Consensus 283 ~~~~~~~~~~-~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~ 361 (611)
T 1nr0_A 283 IEDQQLGIIW-TKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRV 361 (611)
T ss_dssp GGGCEEEEEE-CSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEC
T ss_pred ccceeEEEEE-cCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeee
Confidence 233455556 456788999999999999998888888999999999999999999999999999999999987665433
Q ss_pred c-ccCCCc------------------------------------------------------------------------
Q 010759 375 L-REHSKE------------------------------------------------------------------------ 381 (502)
Q Consensus 375 ~-~~~~~~------------------------------------------------------------------------ 381 (502)
+ ..|...
T Consensus 362 ~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~ 441 (611)
T 1nr0_A 362 FPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK 441 (611)
T ss_dssp SSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE
T ss_pred cccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc
Confidence 2 223333
Q ss_pred ---------EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 382 ---------IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 382 ---------i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
+.+++|+|+|. +|++|+.|++|++||+..+.. +.. .+|...|++|+|||+|++||+++.
T Consensus 442 ~~~~~~~~~v~~va~spdg~---------~lasgs~D~~v~lwd~~~~~~~~~~~-~~h~~~v~~v~fspdg~~las~s~ 511 (611)
T 1nr0_A 442 LTEVPISYNSSCVALSNDKQ---------FVAVGGQDSKVHVYKLSGASVSEVKT-IVHPAEITSVAFSNNGAFLVATDQ 511 (611)
T ss_dssp EEEEECSSCEEEEEECTTSC---------EEEEEETTSEEEEEEEETTEEEEEEE-EECSSCEEEEEECTTSSEEEEEET
T ss_pred eeeeecCCCceEEEEeCCCC---------EEEEeCCCCeEEEEEccCCceeeeec-cCCCCceEEEEECCCCCEEEEEcC
Confidence 34455555543 789999999999999987654 334 679999999999999999999999
Q ss_pred CCcEEEEeCCC-CeeEEE--Ee-cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 451 DKSMHIWSLKE-GKIVKT--YT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 451 Dg~i~iw~~~~-~~~~~~--~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|++|++|++.+ ++++.. +. +...|.+++|+|||++||+|+.|++|+|||+.
T Consensus 512 d~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~ 566 (611)
T 1nr0_A 512 SRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMN 566 (611)
T ss_dssp TSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CCCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECC
Confidence 99999999987 666544 33 45679999999999999999999999999974
No 7
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.1e-46 Score=392.15 Aligned_cols=325 Identities=30% Similarity=0.547 Sum_probs=291.6
Q ss_pred CCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 143 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 143 ~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
....+..+.+|...|++++|+|++++|++++.|+.|++|+.... .+..+ ..|...|.+++|+
T Consensus 251 ~~~~~~~~~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~~~--------------~~~~~----~~h~~~v~~~~~~ 312 (577)
T 2ymu_A 251 NGQLLQTLTGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRNGQ--------------LLQTL----TGHSSSVWGVAFS 312 (577)
T ss_dssp TSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC--------------EEEEE----CCCSSCEEEEEEC
T ss_pred CCCEEEEEecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc--------------EEEEE----ecCCCCeEEEEEC
Confidence 34456778899999999999999999999999999999996431 11122 2457789999999
Q ss_pred CCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 223 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
|++.+|++++.|+.|++|+..+.....+.+|..+|++++|+|++.+|++|+.|++|++||. +++....+..|...+.++
T Consensus 313 ~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~ 391 (577)
T 2ymu_A 313 PDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGV 391 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEE
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEE
Confidence 9999999999999999999988888889999999999999999999999999999999995 567778888899999999
Q ss_pred ecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 303 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 303 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
.|.+ ...+++++.|+.|++|+. ..+.+..+.+|...|.+++|+|++++|++++.|++|++||. +++.+..+..|...
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~ 469 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 469 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSSC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCCC
Confidence 9865 456788999999999996 45677888999999999999999999999999999999996 56777888899999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
|.+++|+|++. +|++++.|+.|++||. +++++..+.+|...|++|+|+|+|++||+|+.||.|+|||. +
T Consensus 470 v~~~~~spd~~---------~las~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~ 538 (577)
T 2ymu_A 470 VRGVAFSPDGQ---------TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 538 (577)
T ss_dssp EEEEEECTTSC---------EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-T
T ss_pred EEEEEEcCCCC---------EEEEEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-C
Confidence 99999999986 8999999999999995 68899999999999999999999999999999999999996 6
Q ss_pred CeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 462 GKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 462 ~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
++.+.++.++ ..|.+++|+|||++|++++.|++|+|||
T Consensus 539 ~~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 539 GQLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 7888888775 5699999999999999999999999997
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.8e-47 Score=360.30 Aligned_cols=289 Identities=24% Similarity=0.355 Sum_probs=249.1
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..+|++|...|++++|||++++||||+.||+|+|||+.++.. ++.+ ..+..+|.+++|+|+++
T Consensus 6 ~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~-------------~~~~----~~~~~~v~~~~~~~~~~ 68 (304)
T 2ynn_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVE-------------VRSI----QVTETPVRAGKFIARKN 68 (304)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEE----ECCSSCEEEEEEEGGGT
T ss_pred EEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCce-------------eEEe----eccCCcEEEEEEeCCCC
Confidence 467899999999999999999999999999999999876531 1222 23467899999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|++|+.|+.|++|+.. +.....+.+|...|++++|+|++.+|++|+.|++|++||++++..
T Consensus 69 ~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~----------------- 131 (304)
T 2ynn_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA----------------- 131 (304)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTE-----------------
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcc-----------------
Confidence 99999999999999986 456678899999999999999999999999999999999876421
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecc-cCCCcEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIY 383 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~~~~~i~ 383 (502)
....+.+|...|.+++|+| ++.+|++|+.|++|++||+.+......+. .+...+.
T Consensus 132 -----------------------~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~ 188 (304)
T 2ynn_A 132 -----------------------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVN 188 (304)
T ss_dssp -----------------------EEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEE
T ss_pred -----------------------hhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEE
Confidence 1235678999999999999 67899999999999999998877655554 4557899
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
.+.|+|.... .+|++|+.|++|++||+++++++.++.+|...|++++|+|++++|++|+.||+|++||+.+++
T Consensus 189 ~~~~~~~~~~-------~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 189 YVDYYPLPDK-------PYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYK 261 (304)
T ss_dssp EEEECCSTTC-------CEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEEEEcCCC-------CEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999875321 278999999999999999999999999999999999999999999999999999999999999
Q ss_pred eEEEEecC-CCEEEEEECCCCC--EEEEEECCCeEEEEEe
Q 010759 464 IVKTYTGN-GGIFEVCWNKEGD--KIAACFANHTVCVLDF 500 (502)
Q Consensus 464 ~~~~~~~~-~~i~~~~ws~~g~--~la~~~~~~~v~v~~~ 500 (502)
+++++..+ ..+++++|+|+|. ++|+|+.|| +.+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g-~~~~~~ 300 (304)
T 2ynn_A 262 VEKTLNVGLERSWCIATHPTGRKNYIASGFDNG-FTVLSL 300 (304)
T ss_dssp EEEEECCSSSSEEEEEECTTCGGGCEEEEETTE-EEEEEC
T ss_pred eeeeccCCCccEEEEEECCCCCceEEEEecCCc-eEEEEe
Confidence 99998754 5799999999985 578887665 557665
No 9
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.8e-46 Score=366.33 Aligned_cols=288 Identities=24% Similarity=0.418 Sum_probs=257.1
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.....|+||...|++++|+|++++|||||.|++|+|||..++... ..+ ..+...|.+++|+|+
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~-------------~~~----~~~~~~v~~~~~sp~ 117 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKE-------------HAV----TMPCTWVMACAYAPS 117 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-------------EEE----ECSSSCCCEEEECTT
T ss_pred EEEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcc-------------eEE----ecCCCCEEEEEECCC
Confidence 445789999999999999999999999999999999998765311 111 124567999999999
Q ss_pred CCEEEEEECCCcEEEEECCC-------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc
Q 010759 225 GTLLATGSYDGQARIWSTNG-------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~-------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
|.+|++|+.|+.+++|+... .....+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.+..+..|..
T Consensus 118 g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~ 197 (354)
T 2pbi_B 118 GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA 197 (354)
T ss_dssp SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC
Confidence 99999999999999998742 23456778999999999999999999999999999999999999999999999
Q ss_pred CeEEEecCC---CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 298 PTLDVDWRN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 298 ~~~~~~~~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
.+.++.+.. ...+++++.|+.|++|++..++++..+.+|...|.+++|+|++.+|++|+.|++|++||++.++.+..
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~~~ 277 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREVAI 277 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE
T ss_pred CeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE
Confidence 998888753 36789999999999999999999999999999999999999999999999999999999998877665
Q ss_pred cccC--CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 375 LREH--SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 375 ~~~~--~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
+..+ ...+.+++|+|++. +|++|+.|++|++||+.+++.+..+.+|..+|++++|+|+|++||+|+.||
T Consensus 278 ~~~~~~~~~~~~~~~s~~g~---------~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 278 YSKESIIFGASSVDFSLSGR---------LLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ECCTTCCSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTS
T ss_pred EcCCCcccceeEEEEeCCCC---------EEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCC
Confidence 5433 34789999999986 799999999999999999999999999999999999999999999999999
Q ss_pred cEEEEe
Q 010759 453 SMHIWS 458 (502)
Q Consensus 453 ~i~iw~ 458 (502)
+|+||+
T Consensus 349 ~v~vW~ 354 (354)
T 2pbi_B 349 TLRVWA 354 (354)
T ss_dssp EEEEEC
T ss_pred CEEecC
Confidence 999995
No 10
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2.1e-45 Score=353.57 Aligned_cols=289 Identities=27% Similarity=0.459 Sum_probs=248.9
Q ss_pred eeccccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.+|.||.++|++++|+|++ ++|+|||.|++|++|++...... ....+.. ..+|...|.+++|+|+++
T Consensus 11 ~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~--------~~~~~~~----~~~h~~~v~~~~~s~dg~ 78 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQK--------FGVPVRS----FKGHSHIVQDCTLTADGA 78 (319)
T ss_dssp EEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTE--------EEEEEEE----EECCSSCEEEEEECTTSS
T ss_pred EEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCcc--------ccccceE----EeCCcccEEEEEECCCCC
Confidence 5789999999999999975 89999999999999998642210 0111222 234678899999999999
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|++|+.|++|++||+.. .....+.+|..+|.+++|+|++.+|++|+.|++|++||++..
T Consensus 79 ~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~------------------- 139 (319)
T 3frx_A 79 YALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKGQ------------------- 139 (319)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTSC-------------------
T ss_pred EEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------------------
Confidence 999999999999999864 556788999999999999999999999999999999998532
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC------CCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT------GSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~------~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
.+..+.+|...|.+++|+|. +.+|++++.|++|++||+++.+....+.+|.
T Consensus 140 -----------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~ 196 (319)
T 3frx_A 140 -----------------------CLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN 196 (319)
T ss_dssp -----------------------EEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC
T ss_pred -----------------------eEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC
Confidence 12345678888999999885 4589999999999999999999989999999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
..|.+++|+|++. +|++|+.||+|++||+.+++.+..+..+ ..|.+++|+|++.+|++++.+ .|++|++
T Consensus 197 ~~v~~~~~sp~g~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~~~-~i~v~~~ 265 (319)
T 3frx_A 197 SNINTLTASPDGT---------LIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAATAT-GIKVFSL 265 (319)
T ss_dssp SCEEEEEECTTSS---------EEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEETT-EEEEEEE
T ss_pred CcEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEcCC-CcEEEEe
Confidence 9999999999986 8999999999999999999999998855 689999999999999998865 4999999
Q ss_pred CCCeeEEEEec---------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 460 KEGKIVKTYTG---------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 460 ~~~~~~~~~~~---------~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..+.++..+.. ...+.+++|+|||++||+|+.|+.|+|||+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~~Dg~i~vWd~~ 316 (319)
T 3frx_A 266 DPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGYTDNVIRVWQVM 316 (319)
T ss_dssp TTEEEEEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred CcCeeeeccCccccccccCcCcceeEEEECCCCCEEEEeecCceEEEEEEe
Confidence 98877766542 3458999999999999999999999999985
No 11
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.3e-46 Score=360.78 Aligned_cols=295 Identities=28% Similarity=0.517 Sum_probs=245.9
Q ss_pred ceeecccccc-ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 146 DVTILEGHTS-EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 146 ~~~~l~~H~~-~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.+..|.+|.. .|.+++|+|+|++||||+.|++|+||++.++.. .. .. ....+|...|.+++|+|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~-----------~~-~~--~~~~~h~~~v~~~~~sp~ 72 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSW-----------IC-KS--VLSEGHQRTVRKVAWSPC 72 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEE-----------EE-EE--EECSSCSSCEEEEEECTT
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcc-----------ee-ee--eeccccCCcEEEEEECCC
Confidence 3567889988 999999999999999999999999999865421 00 00 112356788999999999
Q ss_pred CCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 225 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
+++|++|+.|+.|+||+.... ....+.+|..+|++++|+|++++|++|+.|++|++||+.++...
T Consensus 73 g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~------------ 140 (345)
T 3fm0_A 73 GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEY------------ 140 (345)
T ss_dssp SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCE------------
T ss_pred CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCe------------
Confidence 999999999999999997643 45678899999999999999999999999999999998764311
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecccCC
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--YVHDLREHS 379 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~~~ 379 (502)
..+..+.+|...|.+++|+|++.+|++|+.|++|++||...+. +...+.+|.
T Consensus 141 --------------------------~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~ 194 (345)
T 3fm0_A 141 --------------------------ECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHE 194 (345)
T ss_dssp --------------------------EEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCS
T ss_pred --------------------------EEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCC
Confidence 1133566889999999999999999999999999999998775 446788999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC---------------CeEEEEeeC-CCCCEEEEEECCCCC
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL---------------GKLLYSLNG-HREPVYSLAFSPTGE 443 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~---------------~~~~~~~~~-h~~~v~~l~~spdg~ 443 (502)
..|++++|+|++. +|++|+.|++|+|||... .+++..+.+ |...|++++|+|++.
T Consensus 195 ~~v~~l~~sp~g~---------~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 195 STVWSLAFDPSGQ---------RLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp SCEEEEEECTTSS---------EEEEEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC
T ss_pred CceEEEEECCCCC---------EEEEEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC
Confidence 9999999999986 799999999999999632 134555655 888999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCe--------eE-EEEec-CCCEEEEEECCCC-CEEEEEECCCeEEEEEee
Q 010759 444 YLASGSLDKSMHIWSLKEGK--------IV-KTYTG-NGGIFEVCWNKEG-DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~--------~~-~~~~~-~~~i~~~~ws~~g-~~la~~~~~~~v~v~~~~ 501 (502)
+|++++.|+.|++|+...+. +. ....+ ...|.+++|+|++ .+||+|+.||+|+||+++
T Consensus 266 ~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~ 334 (345)
T 3fm0_A 266 ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQ 334 (345)
T ss_dssp CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEEC
T ss_pred EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEec
Confidence 99999999999999987542 11 11122 4569999999998 599999999999999985
No 12
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.2e-46 Score=363.58 Aligned_cols=293 Identities=20% Similarity=0.298 Sum_probs=234.9
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
.|...|.+++|||||++|++++ |+++|+||........ ....+.. ........+...|.+++|+|++ .|++|
T Consensus 28 ~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~-~~~~~~~-----~~~~~~~~~~~~v~~~~~s~d~-~l~~~ 99 (344)
T 4gqb_B 28 CMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKD-PCAAPNE-----GFCSAGVQTEAGVADLTWVGER-GILVA 99 (344)
T ss_dssp SCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESS-GGGTTCG-----GGCSEEEEESSCEEEEEEETTT-EEEEE
T ss_pred cccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeecc-ccccCCc-----ceeeeeeccCCCEEEEEEeCCC-eEEEE
Confidence 4677799999999999999888 7888988732110000 0000000 0000011224579999999985 67899
Q ss_pred ECCCcEEEEECCCc-ee----EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 232 SYDGQARIWSTNGD-LK----CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 232 ~~dg~i~iw~~~~~-~~----~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+.||.|+|||+... .. ..+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.
T Consensus 100 s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~------------------ 161 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVV------------------ 161 (344)
T ss_dssp ETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------
T ss_pred ECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE------------------
Confidence 99999999998642 22 23568999999999999999999999999999999987643
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeecc--cCCCcEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLR--EHSKEIY 383 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~--~~~~~i~ 383 (502)
+..+.+|.+.|.+++|+|++. +|++|+.|++|++||+++++.+..+. .+...+.
T Consensus 162 -----------------------~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 218 (344)
T 4gqb_B 162 -----------------------LSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPT 218 (344)
T ss_dssp -----------------------EEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEE
T ss_pred -----------------------EEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccce
Confidence 345678999999999999984 78999999999999999998887764 3556789
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~ 462 (502)
+++|+|++. .+|++|+.||+|+|||+++++++.++.+|...|++|+|+|+| ++||+||.|++|+|||+.++
T Consensus 219 ~~~~~p~~~--------~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~ 290 (344)
T 4gqb_B 219 SLAWHPQQS--------EVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS 290 (344)
T ss_dssp EEEECSSCT--------TEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC
T ss_pred eeeecCCCC--------cceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC
Confidence 999999754 278999999999999999999999999999999999999998 68999999999999999999
Q ss_pred eeEEEEecCCCEEEEEECCCCC-EEEEEECCCeEEEEEee
Q 010759 463 KIVKTYTGNGGIFEVCWNKEGD-KIAACFANHTVCVLDFR 501 (502)
Q Consensus 463 ~~~~~~~~~~~i~~~~ws~~g~-~la~~~~~~~v~v~~~~ 501 (502)
+++....+.+.|++++|+|+|. +||+|+.|++|.+|++.
T Consensus 291 ~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 291 ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 8776544556799999999986 67899999999999975
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.5e-46 Score=365.66 Aligned_cols=288 Identities=19% Similarity=0.311 Sum_probs=239.9
Q ss_pred cccccceeEEEECCCCCEEEEEeC------CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 151 EGHTSEVCACAWSPAGSLLASGSG------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~~~l~sgs~------D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.+|...|++++|||||++|||||. |+.|++|+..++...... ......+...|.+++|+|+
T Consensus 39 ~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~-------------~~~~~~~~~~V~~~~~s~d 105 (357)
T 4g56_B 39 ACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESL-------------CTAGVQTEAGVTDVAWVSE 105 (357)
T ss_dssp -CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGG-------------CSEEEECSSCEEEEEEETT
T ss_pred ccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeE-------------ecccCCCCCCEEEEEEcCC
Confidence 469999999999999999999997 778999987665422111 1111235677999999999
Q ss_pred CCEEEEEECCCcEEEEECCCce-----eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 225 GTLLATGSYDGQARIWSTNGDL-----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~-----~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+.+ ++++.||+|+|||+.... .....+|...|++++|+|++++|++|+.|++|++||+++++.
T Consensus 106 ~~~-l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~----------- 173 (357)
T 4g56_B 106 KGI-LVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAV----------- 173 (357)
T ss_dssp TEE-EEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEE-----------
T ss_pred CCE-EEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcE-----------
Confidence 864 567889999999975421 224458999999999999999999999999999999987643
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeec--c
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDL--R 376 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~~--~ 376 (502)
+..+.+|...|.+++|+|++. ++++++.||+|++||+++++.+..+ .
T Consensus 174 ------------------------------~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~ 223 (357)
T 4g56_B 174 ------------------------------LKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFC 223 (357)
T ss_dssp ------------------------------EEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCT
T ss_pred ------------------------------EEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeec
Confidence 234567888999999999875 7899999999999999988876554 3
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEE
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMH 455 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~ 455 (502)
.+...+.+++|+|++. .+|++|+.|+.|++||+++++++..+.+|..+|++|+|+|++ ++||+|+.|++|+
T Consensus 224 ~~~~~v~~v~~sp~~~--------~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~ 295 (357)
T 4g56_B 224 ASDTIPTSVTWHPEKD--------DTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVA 295 (357)
T ss_dssp TCCSCEEEEEECTTST--------TEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred cccccccchhhhhccc--------ceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEE
Confidence 4667899999999764 278999999999999999999999999999999999999997 6899999999999
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECC-CCCEEEEEECCCeEEEEEee
Q 010759 456 IWSLKEGKIVKTYTGNGGIFEVCWNK-EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~~i~~~~ws~-~g~~la~~~~~~~v~v~~~~ 501 (502)
|||+.+++++..+.+...|++++|+| ++++||+|+.|++|+||++.
T Consensus 296 iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~ 342 (357)
T 4g56_B 296 VLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLP 342 (357)
T ss_dssp EECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred EEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECC
Confidence 99999999988877777899999999 89999999999999999984
No 14
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=7.9e-47 Score=372.63 Aligned_cols=292 Identities=25% Similarity=0.471 Sum_probs=254.7
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
...+|+||.+.|++++|+|++++|+|||.|++|+|||+.++.. ...+ ..|...|.+++|+|+|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~-------------~~~~----~~h~~~v~~~~~s~~g 120 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQK-------------THAI----KLHCPWVMECAFAPNG 120 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEE-------------EEEE----ECCCTTCCCCEECTTS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcc-------------ceEE----ecCCCCEEEEEECCCC
Confidence 3578999999999999999999999999999999999876531 1122 2356789999999999
Q ss_pred CEEEEEECCCcEEEEECCCc--------eeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEe----
Q 010759 226 TLLATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF---- 292 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~---- 292 (502)
++|++|+.|+.+++|++... ....+.+|.+.|.++.|+|++ ..|++|+.|++|++||+.+++.+..+
T Consensus 121 ~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~ 200 (380)
T 3iz6_a 121 QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEF 200 (380)
T ss_dssp SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCS
T ss_pred CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeeccc
Confidence 99999999999999997531 234678999999999999974 57999999999999999999888776
Q ss_pred -eecccCeEEEecC--CCceEEEEcCCCeEEEEEcC-CCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 293 -EFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 293 -~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
..|...+.++.+. +...+++++.|+.|++|++. ...++..+.+|.+.|.+++|+|++++|++|+.||+|++||+++
T Consensus 201 ~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~ 280 (380)
T 3iz6_a 201 PSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRT 280 (380)
T ss_dssp SSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTT
T ss_pred CCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCC
Confidence 4577888888874 45688999999999999997 4577889999999999999999999999999999999999999
Q ss_pred CceeeecccCC-------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe----eCCCCCEEEEE
Q 010759 369 DKYVHDLREHS-------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL----NGHREPVYSLA 437 (502)
Q Consensus 369 ~~~~~~~~~~~-------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~----~~h~~~v~~l~ 437 (502)
+..+..+..+. ..+.+++|+|+|. +|++|+.||.|++||+..++.+..+ .+|...|++++
T Consensus 281 ~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~ 351 (380)
T 3iz6_a 281 GHQLQVYNREPDRNDNELPIVTSVAFSISGR---------LLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLG 351 (380)
T ss_dssp TEEEEEECCCCSSSCCSSCSCSEEEECSSSS---------EEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEE
T ss_pred CcEEEEecccccccccccCceEEEEECCCCC---------EEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEE
Confidence 98877665432 2488999999986 7899999999999999999988877 68999999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
|+|+|++|++||.||+|+||++..++
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGHR 377 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSSS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCCc
Confidence 99999999999999999999997654
No 15
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=8.4e-45 Score=377.99 Aligned_cols=326 Identities=31% Similarity=0.556 Sum_probs=289.3
Q ss_pred CCCceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 143 PNSDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 143 ~~~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
....+..+.+|...|.+++|+|++++|++++.|+.|++|+.... .+..+ ..|...|.+++|+
T Consensus 210 ~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~i~~w~~~~~--------------~~~~~----~~~~~~v~~v~~~ 271 (577)
T 2ymu_A 210 NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ--------------LLQTL----TGHSSSVNGVAFR 271 (577)
T ss_dssp TSCEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSC--------------EEEEE----CCCSSCEEEEEEC
T ss_pred CCcEEEEEecCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCC--------------EEEEE----ecCCCCEEEEEEc
Confidence 34456678899999999999999999999999999999995421 11122 2356789999999
Q ss_pred CCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 223 GEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
|++++|++++.|+.|++|+..+.....+.+|..+|++++|+|++.+|++++.|++|++||+... ....+..|...+.++
T Consensus 272 ~d~~~l~~~~~d~~i~~w~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~ 350 (577)
T 2ymu_A 272 PDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGV 350 (577)
T ss_dssp TTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEE
T ss_pred CCCCEEEEEeCCCEEEEEeCCCcEEEEEecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEE
Confidence 9999999999999999999998888889999999999999999999999999999999998654 455677788889999
Q ss_pred ecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 303 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 303 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
.|.+ ...+++++.|+.+++|+. ..+.+..+.+|...|.+++|+|++++|++++.|+.|++||. +++.+..+..|...
T Consensus 351 ~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~ 428 (577)
T 2ymu_A 351 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSS 428 (577)
T ss_dssp EECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSC
T ss_pred EECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCC
Confidence 8865 456788899999999996 45677888999999999999999999999999999999995 56778888999999
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
|++++|+|++. +|++++.|+.|++||. +++.+..+.+|...|++++|+|++++||+++.|+.|++|+. +
T Consensus 429 v~~~~~s~d~~---------~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~ 497 (577)
T 2ymu_A 429 VWGVAFSPDDQ---------TIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-N 497 (577)
T ss_dssp EEEEEECTTSS---------EEEEEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-T
T ss_pred eEEEEECCCCC---------EEEEEcCCCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-C
Confidence 99999999986 7899999999999996 57888899999999999999999999999999999999995 6
Q ss_pred CeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 462 GKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 462 ~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++.++.+.++ ..|.+++|+|+|++||+++.|+.|+|||.
T Consensus 498 ~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~ 537 (577)
T 2ymu_A 498 GQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR 537 (577)
T ss_dssp SCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT
T ss_pred CCEEEEEeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC
Confidence 7888888765 56999999999999999999999999984
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-45 Score=354.66 Aligned_cols=296 Identities=25% Similarity=0.415 Sum_probs=236.3
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.+..|.+|..+|.+++|+|+ +||||+.|++|+||++..+.. . ....+ ....|...|.+++|+|++
T Consensus 6 ~~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~---------~--~~~~~--~~~~h~~~v~~v~~sp~~ 70 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDF---------T--LIDVL--DETAHKKAIRSVAWRPHT 70 (330)
T ss_dssp EEEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCC---------E--EEEEE--CTTCCCSCEEEEEECTTS
T ss_pred cceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCe---------E--EEEEE--ecCCccCCEEEEEECCCC
Confidence 35678999999999999998 999999999999999865321 0 11111 012367889999999999
Q ss_pred CEEEEEECCCcEEEEECCC--------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc
Q 010759 226 TLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~--------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
++|++|+.|++|+||+... .....+.+|..+|++++|+|++++|++|+.|++|++||++....
T Consensus 71 ~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~--------- 141 (330)
T 2hes_X 71 SLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGE--------- 141 (330)
T ss_dssp SEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCC---------
T ss_pred CEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCC---------
Confidence 9999999999999999742 34557889999999999999999999999999999999853210
Q ss_pred CeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC--ceeeec
Q 010759 298 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--KYVHDL 375 (502)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~--~~~~~~ 375 (502)
...++..+.+|...|.+++|+|++.+|++|+.|++|++||..++ .++..+
T Consensus 142 ----------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~ 193 (330)
T 2hes_X 142 ----------------------------EYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVL 193 (330)
T ss_dssp ----------------------------CCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEE
T ss_pred ----------------------------CeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEc
Confidence 01223457789999999999999999999999999999998766 577888
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--------eEEEEeeC-CCCCEEEEEECCCCCEEE
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--------KLLYSLNG-HREPVYSLAFSPTGEYLA 446 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--------~~~~~~~~-h~~~v~~l~~spdg~~la 446 (502)
.+|...|.+++|+|++.. .+|++|+.|++|++||+..+ .+...+.+ |...|++++|+|++ +|+
T Consensus 194 ~~h~~~v~~~~~~~~~~~-------~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~ 265 (330)
T 2hes_X 194 NGHEGTVWSSDFDKTEGV-------FRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIA 265 (330)
T ss_dssp CCCSSCEEEEEECCSSSS-------CEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEE
T ss_pred cCCCCcEEEEEecCCCCe-------eEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEE
Confidence 999999999999998421 27899999999999998754 44555655 89999999999765 899
Q ss_pred EEeCCCcEEEEeCCCCe--eEEEE-ecCC--CEEEEEECC--CCCEEEEEECCCeEEEEEee
Q 010759 447 SGSLDKSMHIWSLKEGK--IVKTY-TGNG--GIFEVCWNK--EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 447 sgs~Dg~i~iw~~~~~~--~~~~~-~~~~--~i~~~~ws~--~g~~la~~~~~~~v~v~~~~ 501 (502)
+|+.||.|+||+..++. .+... .++. .|.+++|+| ++++||+|+.||+|+|||++
T Consensus 266 s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~~las~s~Dg~v~~W~~~ 327 (330)
T 2hes_X 266 SVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKTILATGGDDGIVNFWSLE 327 (330)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----CCEEEEETTSEEEEEEC-
T ss_pred EEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCceEEEEecCCCcEEEEEec
Confidence 99999999999998874 33333 3333 699999999 78999999999999999975
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=5.3e-44 Score=347.42 Aligned_cols=295 Identities=23% Similarity=0.395 Sum_probs=239.5
Q ss_pred ceeeccccccceeEEEE-----CC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEE
Q 010759 146 DVTILEGHTSEVCACAW-----SP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTL 219 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~-----sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l 219 (502)
...+|+||...|++++| +| ++++|+|||.|++|+||++........ ....... ..+|...|.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~------~~~~~~~----l~~h~~~V~~~ 82 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGY------FGIPHKA----LTGHNHFVSDL 82 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSB------SEEEEEE----ECCCSSCEEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccc------cccccch----hccCCCceEEE
Confidence 35679999999999999 77 899999999999999999875432110 0011122 23567889999
Q ss_pred EECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 220 DWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 220 ~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
+|+|++.++++|+.|++|++||+. +.....+.+|..+|++++|+|++++|++|+.|++|++||+..... ..
T Consensus 83 ~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~-~~------- 154 (343)
T 2xzm_R 83 ALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECK-FS------- 154 (343)
T ss_dssp EECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEE-EE-------
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCce-ee-------
Confidence 999999999999999999999986 456678899999999999999999999999999999999863211 00
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC----------CEEEEEeCCCcEEEEeCCC
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG----------SLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~----------~~l~sgs~dg~i~iwd~~~ 368 (502)
.....+|...|.+++|+|++ .+|++++.|++|++||. .
T Consensus 155 -------------------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~ 202 (343)
T 2xzm_R 155 -------------------------------SAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-N 202 (343)
T ss_dssp -------------------------------CCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-T
T ss_pred -------------------------------eecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-C
Confidence 01123677889999999887 78999999999999994 5
Q ss_pred CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 369 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
......+..|...|.+++|+|++. +|++|+.||.|++||+.. ......+. +...|++++|+|++++|++
T Consensus 203 ~~~~~~~~~h~~~v~~~~~s~~g~---------~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~~~~la~ 272 (343)
T 2xzm_R 203 FQIRYTFKAHESNVNHLSISPNGK---------YIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAFNPKLQWVAV 272 (343)
T ss_dssp TEEEEEEECCSSCEEEEEECTTSS---------EEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEECSSSCEEEE
T ss_pred CceeEEEcCccccceEEEECCCCC---------EEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEECCCCCEEEE
Confidence 566778889999999999999986 899999999999999953 33334443 4567999999999998875
Q ss_pred EeCCCcEEEEeCCCCeeEE--EEe-----------c-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 448 GSLDKSMHIWSLKEGKIVK--TYT-----------G-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~--~~~-----------~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
| .|+.|++|++.+++... .+. + ...+.+++|+|+|++||+|+.||+|++|++.
T Consensus 273 ~-~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~~ 339 (343)
T 2xzm_R 273 G-TDQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGFTDGVIRTFSFE 339 (343)
T ss_dssp E-ESSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEETTSEEEEEEEE
T ss_pred E-CCCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEecCCceEEEEEEE
Confidence 5 57789999998776543 332 2 3458999999999999999999999999985
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.6e-43 Score=350.59 Aligned_cols=298 Identities=25% Similarity=0.473 Sum_probs=242.6
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEee-ecccccCCCCeEEEEECCCCCEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-KGRTNEKSKDVTTLDWNGEGTLLAT 230 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~V~~l~~s~~~~~l~s 230 (502)
+|...|++++|||+|++||+|+ |++++||++.++................... ......+...|.+++|+|+|++|++
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s 140 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLAT 140 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEE
Confidence 6999999999999999999986 7899999998765321111000000000000 0000112335999999999999999
Q ss_pred EECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 231 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 231 g~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
|+.|+.|+|||... .....+.+|...|++++|+|++.+|++|+.|++|++||+++++....+
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----------------- 203 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----------------- 203 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE-----------------
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE-----------------
Confidence 99999999999875 455678899999999999999999999999999999999887543222
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeec-------ccCCCc
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDL-------REHSKE 381 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~-------~~~~~~ 381 (502)
.+...+.+++|+| ++++|++|+.|+.|++||+.++..+..+ .+|...
T Consensus 204 -------------------------~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~ 258 (393)
T 1erj_A 204 -------------------------SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDS 258 (393)
T ss_dssp -------------------------ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSC
T ss_pred -------------------------EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCC
Confidence 1334578899999 8999999999999999999998877665 568899
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------------eEEEEeeCCCCCEEEEEECCCCCEEEEEe
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------KLLYSLNGHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------~~~~~~~~h~~~v~~l~~spdg~~lasgs 449 (502)
|++++|+|++. +|++|+.||.|++||+++. .+...+.+|...|++++|+|++.+|++|+
T Consensus 259 v~~v~~~~~g~---------~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs 329 (393)
T 1erj_A 259 VYSVVFTRDGQ---------SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGS 329 (393)
T ss_dssp EEEEEECTTSS---------EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEE
T ss_pred EEEEEECCCCC---------EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEe
Confidence 99999999986 7899999999999999753 45667889999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECC------CCCEEEEEECCCeEEEEEee
Q 010759 450 LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNK------EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~------~g~~la~~~~~~~v~v~~~~ 501 (502)
.|+.|++||+.+++.+..+.++ ..|.+++|++ ++++||+|+.|++|+||+++
T Consensus 330 ~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~ 388 (393)
T 1erj_A 330 KDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYK 388 (393)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEE
T ss_pred CCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccc
Confidence 9999999999999999888765 4699999886 78999999999999999986
No 19
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.8e-43 Score=337.47 Aligned_cols=289 Identities=28% Similarity=0.516 Sum_probs=250.3
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
....+.+|..+|++++|+|++++||+|+.|+.|++|++.++.. ... ...|...|.+++|+|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~-------------~~~----~~~h~~~v~~~~~~~~~ 77 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKF-------------EKT----ISGHKLGISDVAWSSDS 77 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEE----ECCCSSCEEEEEECTTS
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCccc-------------chh----hccCCCceEEEEEcCCC
Confidence 3467899999999999999999999999999999999876531 111 23456789999999999
Q ss_pred CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 226 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
++|++|+.|+.|++|+... .....+.+|...|.+++|+|++++|++|+.|++|++||+++++..
T Consensus 78 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~--------------- 142 (312)
T 4ery_A 78 NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCL--------------- 142 (312)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEE---------------
T ss_pred CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEE---------------
Confidence 9999999999999999864 556778899999999999999999999999999999999876432
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc-cCCCcEE
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR-EHSKEIY 383 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~~~~~i~ 383 (502)
..+.+|...|.+++|+|++++|++|+.||.|++||+++++.+..+. .+...+.
T Consensus 143 --------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~ 196 (312)
T 4ery_A 143 --------------------------KTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVS 196 (312)
T ss_dssp --------------------------EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEE
T ss_pred --------------------------EEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceE
Confidence 3445678889999999999999999999999999999988876654 4567899
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEE---EEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS---LAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~---l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
.++|+|++. +|++++.||.|++||+++++++..+.+|...+.+ ....+++.+|++|+.||.|++|++.
T Consensus 197 ~~~~~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 197 FVKFSPNGK---------YILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp EEEECTTSS---------EEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETT
T ss_pred EEEECCCCC---------EEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECC
Confidence 999999986 7899999999999999999999999888765332 3344678999999999999999999
Q ss_pred CCeeEEEEecC-CCEEEEEECCCCCEEEEEE--CCCeEEEEEee
Q 010759 461 EGKIVKTYTGN-GGIFEVCWNKEGDKIAACF--ANHTVCVLDFR 501 (502)
Q Consensus 461 ~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~--~~~~v~v~~~~ 501 (502)
+++++..+.++ ..|.+++|+|+++.||+++ .|++|+||+..
T Consensus 268 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 268 TKEIVQKLQGHTDVVISTACHPTENIIASAALENDKTIKLWKSD 311 (312)
T ss_dssp TCCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCEEEEECC
T ss_pred CchhhhhhhccCCcEEEEeecCcCCceEEEEccCCccEEEecCC
Confidence 99999998765 4699999999999999997 59999999864
No 20
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.7e-43 Score=341.68 Aligned_cols=321 Identities=17% Similarity=0.257 Sum_probs=277.9
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
|..+|.+++|+|||++++++..++.+.+|..... ...+. ...|...|++++|+|++++|++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~------------~~~~~-----~~~h~~~v~~~~~~~~~~~l~~~~ 70 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH------------ARQIN-----TLNHGEVVCAVTISNPTRHVYTGG 70 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE------------EEEEE-----EECCSSCCCEEEECSSSSEEEEEC
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc------------cccce-----eccCCCceEEEEEecCCcEEEEcC
Confidence 5678999999999999999887777666643221 11111 124578899999999999999999
Q ss_pred CCCcEEEEECCCc----eeEeec--CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc--eeEEeeecccCeEEEec
Q 010759 233 YDGQARIWSTNGD----LKCTLS--KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 233 ~dg~i~iw~~~~~----~~~~~~--~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~ 304 (502)
||.|++|+.... ....+. .|..+|.+++|+|++++|++++.|+.|++||+.+++ ....+..|...+.++.|
T Consensus 71 -dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~ 149 (337)
T 1gxr_A 71 -KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAI 149 (337)
T ss_dssp -BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEE
T ss_pred -CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEE
Confidence 999999998642 222233 799999999999999999999999999999999887 55667778888999998
Q ss_pred CC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 305 RN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 305 ~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
.. ...+++++.|+.|++|++...+++..+.+|...|.+++|+|++++|++++.||.|++||+++++.+..+. +...+.
T Consensus 150 ~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~ 228 (337)
T 1gxr_A 150 SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIF 228 (337)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEE
T ss_pred CCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec-CCCceE
Confidence 65 4577888999999999999999999999999999999999999999999999999999999998877664 678899
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
+++|+|++. +|++++.+|.|++||+.+++. ..+..|..+|++++|+|++++|++++.||.|++|++.+++
T Consensus 229 ~~~~s~~~~---------~l~~~~~~~~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 229 SLGYCPTGE---------WLAVGMESSNVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGA 298 (337)
T ss_dssp EEEECTTSS---------EEEEEETTSCEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred EEEECCCCC---------EEEEEcCCCcEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCe
Confidence 999999986 788999999999999998775 4677899999999999999999999999999999999999
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEeeC
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFRM 502 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~~ 502 (502)
.+....+...+.+++|+|+|++|++++.||.|+||++.+
T Consensus 299 ~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~ 337 (337)
T 1gxr_A 299 SIFQSKESSSVLSCDISVDDKYIVTGSGDKKATVYEVIY 337 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSCEEEEEETTSCEEEEEEEC
T ss_pred EEEEecCCCcEEEEEECCCCCEEEEecCCCeEEEEEEeC
Confidence 887777778899999999999999999999999999864
No 21
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.2e-46 Score=370.17 Aligned_cols=325 Identities=20% Similarity=0.379 Sum_probs=277.9
Q ss_pred cccceeEEEECCCCC-EEEEE----------eCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 153 HTSEVCACAWSPAGS-LLASG----------SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 153 H~~~V~~~~~spd~~-~l~sg----------s~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+...|.+++|+|+++ +|++| +.|+.|+||++.++..... .....+...|.+++|
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~---------------~~~~~~~~~v~~~~~ 75 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP---------------IASLQVDSKFNDLDW 75 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC---------------SCCCCCSSCEEEEEE
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE---------------EEEEecCCceEEEEE
Confidence 455799999999987 99999 8999999999976542100 011134678999999
Q ss_pred CCCCCEEEEEECCCcEEEEECCC-----ceeEeecCCCCCEEEEEecCC-CCEEEEecCCCeEEEEeccCcc------ee
Q 010759 222 NGEGTLLATGSYDGQARIWSTNG-----DLKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEE------WK 289 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~-----~~~~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~~~~------~~ 289 (502)
+|++.+|++|+.||.|++|+... .....+.+|..+|++++|+|+ +++|++|+.|++|++||+.++. ..
T Consensus 76 s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 155 (416)
T 2pm9_A 76 SHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP 155 (416)
T ss_dssp CSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC
T ss_pred CCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc
Confidence 99999999999999999999875 366778899999999999998 8999999999999999998876 22
Q ss_pred E---EeeecccCeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcceeeecCC------CcceeEEEEcCCC-CEEEEEeC
Q 010759 290 Q---QFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------QGEVNCVKWDPTG-SLLASCSD 357 (502)
Q Consensus 290 ~---~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~-~~l~sgs~ 357 (502)
. .+..|...+.++.|..+ ..+++++.|+.|++|++...+++..+..| ...|.+++|+|++ .+|++++.
T Consensus 156 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~ 235 (416)
T 2pm9_A 156 LTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATG 235 (416)
T ss_dssp BCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEEC
T ss_pred cccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEEC
Confidence 2 23567788899998754 67889999999999999999888888776 7889999999997 68999999
Q ss_pred CC---cEEEEeCCCC-ceeeecc-cCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010759 358 DV---TAKIWNMKQD-KYVHDLR-EHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 358 dg---~i~iwd~~~~-~~~~~~~-~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 431 (502)
|+ .|++||++++ ..+..+. .|...|.+++|+| ++. +|++++.||.|++||+.+++++..+.+|..
T Consensus 236 d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~---------~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~ 306 (416)
T 2pm9_A 236 SDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEH---------LLLSSGRDNTVLLWNPESAEQLSQFPARGN 306 (416)
T ss_dssp CSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSS---------CEEEEESSSEEEEECSSSCCEEEEEECSSS
T ss_pred CCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCC---------eEEEEeCCCCEEEeeCCCCccceeecCCCC
Confidence 99 9999999986 6677777 8999999999999 664 789999999999999999999999999999
Q ss_pred CEEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEe------------------------------------cCCCE
Q 010759 432 PVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYT------------------------------------GNGGI 474 (502)
Q Consensus 432 ~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~------------------------------------~~~~i 474 (502)
.|++++|+|++ .+|++++.||.|++|++.++....... ....+
T Consensus 307 ~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (416)
T 2pm9_A 307 WCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPS 386 (416)
T ss_dssp CCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCCSTTCCCS
T ss_pred ceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCCccccCCc
Confidence 99999999999 899999999999999998765322110 12345
Q ss_pred EEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 475 FEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 475 ~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+++|+|+|++||+++.|++|+||++.
T Consensus 387 ~~~~~s~dg~~la~~~~d~~v~~w~~~ 413 (416)
T 2pm9_A 387 PAAHWAFGGKLVQITPDGKGVSITNPK 413 (416)
T ss_dssp CCCEEETTTEEECBCTTSSCBCCBCCC
T ss_pred cceEEeeCCeEEEEeCCCCeEEEEEec
Confidence 689999999999999999999999874
No 22
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=3.4e-43 Score=343.14 Aligned_cols=280 Identities=20% Similarity=0.385 Sum_probs=253.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc---
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE--- 286 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~--- 286 (502)
+|...|++++|+|++++|+||+.||+|+||+.. +.....+..|...|.+++|+|++.+|++|+.|+.+++|++...
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~ 141 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNE 141 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTC
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccc
Confidence 467889999999999999999999999999975 4556677889999999999999999999999999999998643
Q ss_pred ---ceeEEeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC--CCCEEEEEeCCCc
Q 010759 287 ---EWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP--TGSLLASCSDDVT 360 (502)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p--~~~~l~sgs~dg~ 360 (502)
.....+..|...+..+.|.++ ..+++++.|++|++|++..++++..+.+|...|.+++|+| ++++|++|+.||+
T Consensus 142 ~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~ 221 (354)
T 2pbi_B 142 NMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKK 221 (354)
T ss_dssp CSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSC
T ss_pred cccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCe
Confidence 345567789999999998654 5788999999999999999999999999999999999987 5789999999999
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--CCCEEEEEE
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--REPVYSLAF 438 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~ 438 (502)
|++||+++++++..+..|...|.+++|+|++. +|++|+.|++|++||++.++.+..+..+ ...+++++|
T Consensus 222 v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~---------~l~s~s~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (354)
T 2pbi_B 222 AMVWDMRSGQCVQAFETHESDVNSVRYYPSGD---------AFASGSDDATCRLYDLRADREVAIYSKESIIFGASSVDF 292 (354)
T ss_dssp EEEEETTTCCEEEEECCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEEEE
T ss_pred EEEEECCCCcEEEEecCCCCCeEEEEEeCCCC---------EEEEEeCCCeEEEEECCCCcEEEEEcCCCcccceeEEEE
Confidence 99999999999999999999999999999886 7999999999999999998887776543 357899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+|+|++|++|+.|+.|++||+.+++.+..+.++ ..|.+++|+|+|++||+|+.|++|+||+
T Consensus 293 s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 293 SLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEC
T ss_pred eCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCEEecC
Confidence 999999999999999999999999988888765 5699999999999999999999999996
No 23
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=7.3e-43 Score=338.07 Aligned_cols=293 Identities=25% Similarity=0.385 Sum_probs=248.0
Q ss_pred eeccccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.+|+||++.|++|+|+|+ +++|||||.|++|+|||+.+..... ....+.+ .+|...|.+++|+|+++
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~--------~~~~~~l----~~h~~~V~~~~~s~dg~ 99 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNY--------GIPQRAL----RGHSHFVSDVVISSDGQ 99 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCS--------EEEEEEE----CCCSSCEEEEEECTTSS
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccc--------ceeeEEE----eCCCCCEEEEEECCCCC
Confidence 579999999999999998 6899999999999999997654221 1112222 34678899999999999
Q ss_pred EEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee-EEeeecccCeEEEec
Q 010759 227 LLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-QQFEFHSGPTLDVDW 304 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~-~~~~~~~~~~~~~~~ 304 (502)
+|++|+.|+.|++|+.... .......+...+..+.+++.+++|++|+.|+.+++||+...... ..+..|...+..+.|
T Consensus 100 ~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~ 179 (340)
T 4aow_A 100 FALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRF 179 (340)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEE
T ss_pred EEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEE
Confidence 9999999999999998754 44456678888999999999999999999999999998765433 334566777777776
Q ss_pred CC---CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc
Q 010759 305 RN---NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE 381 (502)
Q Consensus 305 ~~---~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~ 381 (502)
.. ...+++++.|+.|++|++...+++..+.+|.+.|.+++|+|++++|++|+.||.|++||+++.+.+..+.. ...
T Consensus 180 ~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~-~~~ 258 (340)
T 4aow_A 180 SPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDG-GDI 258 (340)
T ss_dssp CSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEEC-SSC
T ss_pred ccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecC-Cce
Confidence 43 34678899999999999999999999999999999999999999999999999999999999998887765 468
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee---------CCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN---------GHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---------~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
+.++.|+|++. +++++.|+.|++||++.+..+..+. +|...|++|+|+|+|++||+|+.||
T Consensus 259 v~~~~~~~~~~----------~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg 328 (340)
T 4aow_A 259 INALCFSPNRY----------WLCAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN 328 (340)
T ss_dssp EEEEEECSSSS----------EEEEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS
T ss_pred EEeeecCCCCc----------eeeccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC
Confidence 99999999874 5667789999999999888776553 6888999999999999999999999
Q ss_pred cEEEEeCCCCe
Q 010759 453 SMHIWSLKEGK 463 (502)
Q Consensus 453 ~i~iw~~~~~~ 463 (502)
.|+||++.+|+
T Consensus 329 ~v~iW~~~tGt 339 (340)
T 4aow_A 329 LVRVWQVTIGT 339 (340)
T ss_dssp CEEEEEEEC--
T ss_pred EEEEEeCCCcC
Confidence 99999999875
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=5.8e-44 Score=352.12 Aligned_cols=282 Identities=20% Similarity=0.368 Sum_probs=250.1
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc--
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-- 287 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-- 287 (502)
+|...|++++|+|++++|+||+.||+|+|||.. +.....+..|...|.+++|+|++++|++|+.|+++++||+.+..
T Consensus 64 gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~ 143 (380)
T 3iz6_a 64 GHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADR 143 (380)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSC
T ss_pred ccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccc
Confidence 467889999999999999999999999999975 45567888999999999999999999999999999999986532
Q ss_pred -----eeEEeeecccCeEEEecCC--CceEEEEcCCCeEEEEEcCCCcceeee-----cCCCcceeEEEEcC-CCCEEEE
Q 010759 288 -----WKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENRPIKTF-----AGHQGEVNCVKWDP-TGSLLAS 354 (502)
Q Consensus 288 -----~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~-----~~h~~~v~~v~~~p-~~~~l~s 354 (502)
....+..|.+.+..+.|.+ ...+++++.|++|++|++.++..+..+ .+|...|.+++|+| ++.+|++
T Consensus 144 ~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s 223 (380)
T 3iz6_a 144 DGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFIS 223 (380)
T ss_dssp CCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEE
T ss_pred cCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEE
Confidence 3445677888888888764 457999999999999999998888776 68999999999987 8899999
Q ss_pred EeCCCcEEEEeCC-CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC---
Q 010759 355 CSDDVTAKIWNMK-QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR--- 430 (502)
Q Consensus 355 gs~dg~i~iwd~~-~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~--- 430 (502)
|+.|++|++||++ ....+..+.+|...|.+++|+|++. +|++|+.||+|++||+++++.+..+..+.
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~---------~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~ 294 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ---------RFGTGSDDGTCRLFDMRTGHQLQVYNREPDRN 294 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS---------EEEEECSSSCEEEEETTTTEEEEEECCCCSSS
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC---------eEEEEcCCCeEEEEECCCCcEEEEeccccccc
Confidence 9999999999998 4577788899999999999999986 79999999999999999999988876543
Q ss_pred ----CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE----e-cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 431 ----EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY----T-GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 431 ----~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~----~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..|++++|+|+|++|++|+.||.|++||+.+++.+..+ . +.+.|.+++|+|+|++||+|+.|++|+||++.
T Consensus 295 ~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~ 374 (380)
T 3iz6_a 295 DNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFS 374 (380)
T ss_dssp CCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECC
T ss_pred ccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecC
Confidence 24899999999999999999999999999998887776 2 34569999999999999999999999999975
No 25
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.5e-42 Score=346.75 Aligned_cols=317 Identities=25% Similarity=0.452 Sum_probs=280.8
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...+.+|...|.. +++++|++|++|+.||+|++||+.++.. +.. ...|...|.+++|+ +.
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~~~-------------~~~----~~~h~~~v~~~~~~--~~ 170 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTGKC-------------LRT----LVGHTGGVWSSQMR--DN 170 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTCCE-------------EEE----CCCCSSCEEEEEEE--TT
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCCcE-------------EEE----EcCCCCCEEEEEec--CC
Confidence 4678999987643 3556799999999999999999876542 112 23467889999998 57
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
++++|+.||.|++|+.. +.....+.+|...|.++.|+ +++|++|+.|++|++||+.+++....+..|..++.++.+
T Consensus 171 ~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~- 247 (445)
T 2ovr_B 171 IIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY- 247 (445)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE-
T ss_pred EEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE-
Confidence 99999999999999986 45667888999999999996 568999999999999999999999999999999999999
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
+...+++++.|+.|++|++....++..+.+|...|.+++| ++.++++|+.||.|++||+.+++.+..+..|...+.++
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence 5677899999999999999999999999999999999999 78999999999999999999999999999999999998
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC---CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG---HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
.+++. +|++|+.||.|++||+++++.+..+.+ |..+|++++|+ +.+|++|+.||.|++|++.++
T Consensus 326 ~~~~~-----------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~iwd~~~~ 392 (445)
T 2ovr_B 326 ELKDN-----------ILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKLWDLKTG 392 (445)
T ss_dssp EEETT-----------EEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTC
T ss_pred EEeCC-----------EEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEEEECCCC
Confidence 87532 789999999999999999999999886 88899999996 579999999999999999999
Q ss_pred eeEEEE------ecCCCEEEEEECCCCCEEEEEECCCe----EEEEEee
Q 010759 463 KIVKTY------TGNGGIFEVCWNKEGDKIAACFANHT----VCVLDFR 501 (502)
Q Consensus 463 ~~~~~~------~~~~~i~~~~ws~~g~~la~~~~~~~----v~v~~~~ 501 (502)
+.+..+ ...+.|.+++|+|+|.+||+|+.||+ |.||||+
T Consensus 393 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 393 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECC
T ss_pred ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECC
Confidence 998887 23456999999999999999999998 9999986
No 26
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=6.2e-42 Score=358.67 Aligned_cols=328 Identities=17% Similarity=0.290 Sum_probs=273.4
Q ss_pred CceeeccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCC---CeEEEE
Q 010759 145 SDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK---DVTTLD 220 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~V~~l~ 220 (502)
..+..+.+|...|++++|+|+++ +|++|+.|+.|++||+.++.. +..+. .|.. .|.+++
T Consensus 151 ~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~-------------~~~~~----~~~~~~~~v~~~~ 213 (615)
T 1pgu_A 151 NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKF-------------SASDR----THHKQGSFVRDVE 213 (615)
T ss_dssp CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEE-------------EEEEC----SSSCTTCCEEEEE
T ss_pred CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcce-------------eeeec----ccCCCCceEEEEE
Confidence 34567889999999999999998 899999999999999765421 12222 3455 899999
Q ss_pred ECCC-CCEEEEEECCCcEEEEECCC-ceeEee-c---CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 221 WNGE-GTLLATGSYDGQARIWSTNG-DLKCTL-S---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 221 ~s~~-~~~l~sg~~dg~i~iw~~~~-~~~~~~-~---~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
|+|+ +++|++++.||.|++|+... .....+ . .|..+|.+++|+ ++.+|++++.|++|++||+.+++....+..
T Consensus 214 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~ 292 (615)
T 1pgu_A 214 FSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTL 292 (615)
T ss_dssp ECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred ECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcC
Confidence 9999 99999999999999999764 555566 5 899999999999 999999999999999999999998888877
Q ss_pred c----ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC----------------------
Q 010759 295 H----SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT---------------------- 348 (502)
Q Consensus 295 ~----~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~---------------------- 348 (502)
+ ...+..+.|.+...+++++.++.|++|++....++..+.+|.+.|.+++| |+
T Consensus 293 ~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~w~~~~~~~~~ 371 (615)
T 1pgu_A 293 DKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIMEWSSSSMHQDH 371 (615)
T ss_dssp CTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEETTTTEEECCC
T ss_pred CCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEEEEchhhcCcc
Confidence 6 35566777777778889999999999998877777777666655555544 32
Q ss_pred --------------------------------------------------------------------------------
Q 010759 349 -------------------------------------------------------------------------------- 348 (502)
Q Consensus 349 -------------------------------------------------------------------------------- 348 (502)
T Consensus 372 ~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 451 (615)
T 1pgu_A 372 SNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSA 451 (615)
T ss_dssp CSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEE
T ss_pred cCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceE
Confidence
Q ss_pred ----CCEEEEEeC-CCcEEEEeCCCCcee-eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE
Q 010759 349 ----GSLLASCSD-DVTAKIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL 422 (502)
Q Consensus 349 ----~~~l~sgs~-dg~i~iwd~~~~~~~-~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~ 422 (502)
+++|++++. |+.|++||+.++... ..+..|...|.+++|+|++. +|++|+.||.|++||+.++++
T Consensus 452 ~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---------~l~~~~~dg~i~iw~~~~~~~ 522 (615)
T 1pgu_A 452 VSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSET---------YIAAGDVMGKILLYDLQSREV 522 (615)
T ss_dssp EEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTTEE
T ss_pred EEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCC---------EEEEcCCCCeEEEeeCCCCcc
Confidence 334444555 555666665554443 55667889999999999986 899999999999999999999
Q ss_pred EEEeeC-CCCCEEEEEECC----------CCCEEEEEeCCCcEEEEeCCCC-eeEEEEecC-CCEEEEEECCCCCEEEEE
Q 010759 423 LYSLNG-HREPVYSLAFSP----------TGEYLASGSLDKSMHIWSLKEG-KIVKTYTGN-GGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 423 ~~~~~~-h~~~v~~l~~sp----------dg~~lasgs~Dg~i~iw~~~~~-~~~~~~~~~-~~i~~~~ws~~g~~la~~ 489 (502)
+..+.+ |...|++++|+| ++++||+|+.||.|++|++.++ +.+..+.++ ..|.+++|+|+|+ |+++
T Consensus 523 ~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l~s~ 601 (615)
T 1pgu_A 523 KTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-LVSS 601 (615)
T ss_dssp EECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-EEEE
T ss_pred eeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-eEEe
Confidence 999988 999999999999 9999999999999999999987 777777654 5699999999999 9999
Q ss_pred ECCCeEEEEEee
Q 010759 490 FANHTVCVLDFR 501 (502)
Q Consensus 490 ~~~~~v~v~~~~ 501 (502)
+.|++|+||++.
T Consensus 602 ~~d~~v~iw~~~ 613 (615)
T 1pgu_A 602 GADACIKRWNVV 613 (615)
T ss_dssp ETTSCEEEEEEC
T ss_pred cCCceEEEEeee
Confidence 999999999986
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.6e-42 Score=367.15 Aligned_cols=293 Identities=25% Similarity=0.432 Sum_probs=247.5
Q ss_pred eeccccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 148 TILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
..|++|++.|++|+|+|++ .+|+|||.|++|+||++.+..... . ...+. ..+|...|.+++|+|+++
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~-------~-~~~~~----~~~h~~~v~~v~~s~~g~ 443 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY-------G-VAQRR----LTGHSHFVEDVVLSSDGQ 443 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS-------C-EEEEE----EECCSSCEEEEEECTTSS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc-------c-cccce----ecCCCCcEEEEEECCCCC
Confidence 4689999999999999974 799999999999999987543211 0 11112 234678899999999999
Q ss_pred EEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|++|+.||.|+|||+.. .....+.+|...|++++|+|++++|++|+.|++|++||+....... +
T Consensus 444 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~-~------------- 509 (694)
T 3dm0_A 444 FALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYT-I------------- 509 (694)
T ss_dssp EEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEE-E-------------
T ss_pred EEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCccee-e-------------
Confidence 999999999999999864 4566788999999999999999999999999999999975432110 0
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC--CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG--SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
.....+|...|.+++|+|++ .+|++|+.|++|++||+++.+++..+..|...|+
T Consensus 510 ------------------------~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~ 565 (694)
T 3dm0_A 510 ------------------------SEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVS 565 (694)
T ss_dssp ------------------------CSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred ------------------------ccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEE
Confidence 01124688899999999987 6899999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
+++|+|++. +|++|+.||+|++||+.+++++..+.. ...|++++|+|++.+|++++ |+.|+|||+.++.
T Consensus 566 ~v~~spdg~---------~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~-~~~i~iwd~~~~~ 634 (694)
T 3dm0_A 566 TVAVSPDGS---------LCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAAT-EHGIKIWDLESKS 634 (694)
T ss_dssp EEEECTTSS---------EEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEE-TTEEEEEETTTTE
T ss_pred EEEEeCCCC---------EEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEc-CCCEEEEECCCCC
Confidence 999999986 899999999999999999999988874 46899999999999888776 5569999999998
Q ss_pred eEEEEecC--------------------CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 IVKTYTGN--------------------GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ~~~~~~~~--------------------~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++..+..+ ..+.+++|+|+|++|++|+.||+|+|||+.
T Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 635 IVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp EEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred ChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEcCCCeEEEEecc
Confidence 87766421 126789999999999999999999999985
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.7e-41 Score=330.39 Aligned_cols=297 Identities=19% Similarity=0.324 Sum_probs=256.5
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...|.+|...|++++|+|++++|++|+.||.|++|++.++.. +..+ ..|...|.+++|+|+++
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~-------------~~~~----~~h~~~v~~~~~~~~~~ 87 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGER-------------LGTL----DGHTGTIWSIDVDCFTK 87 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEECTTSS
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchh-------------hhhh----hhcCCcEEEEEEcCCCC
Confidence 356899999999999999999999999999999999876532 1112 24577899999999999
Q ss_pred EEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCC-----CeEEEEeccCcceeEEeeecccCeE
Q 010759 227 LLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+|++++.||.|++|++... ....+. |..+|.+++|+|++.+|++++.+ +.|++||+.+......+..
T Consensus 88 ~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~------ 160 (369)
T 3zwl_B 88 YCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTK------ 160 (369)
T ss_dssp EEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEE------
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecc------
Confidence 9999999999999998754 444444 88999999999999999999999 9999999876543222111
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCc--ceeEEEEcCCCCEEEEEeCCCcEEEEeCCC-Cceeeeccc
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQG--EVNCVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVHDLRE 377 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~ 377 (502)
....++..+.+|.+ .+.+++|+|++++|++++.||.|++||+.+ ...+..+..
T Consensus 161 ------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 216 (369)
T 3zwl_B 161 ------------------------VSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDL 216 (369)
T ss_dssp ------------------------ECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEEC
T ss_pred ------------------------cccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEec
Confidence 11223445556666 899999999999999999999999999998 778888889
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC-----
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK----- 452 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg----- 452 (502)
|...|.+++|+|++. +|++++.||.|++||+.+++.+..+. +..++.+++|+|+++++++++.++
T Consensus 217 ~~~~v~~~~~~~~~~---------~l~~~~~d~~i~v~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 286 (369)
T 3zwl_B 217 HEKSISDMQFSPDLT---------YFITSSRDTNSFLVDVSTLQVLKKYE-TDCPLNTAVITPLKEFIILGGGQEAKDVT 286 (369)
T ss_dssp CSSCEEEEEECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECCC-----
T ss_pred CCCceeEEEECCCCC---------EEEEecCCceEEEEECCCCceeeeec-CCCCceeEEecCCCceEEEeecCCCceEE
Confidence 999999999999886 78999999999999999999998888 778999999999999999999998
Q ss_pred ---------cEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 453 ---------SMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 453 ---------~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.|++|++.+++.+..+.++ ..|.+++|+|+|++||+|+.||.|+||+++
T Consensus 287 ~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~ 345 (369)
T 3zwl_B 287 TTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFE 345 (369)
T ss_dssp --------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEEC
T ss_pred EEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECc
Confidence 8999999999999888764 579999999999999999999999999985
No 29
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.7e-42 Score=373.68 Aligned_cols=332 Identities=14% Similarity=0.193 Sum_probs=260.9
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
...||...|++++|+|++++||+|+.||+|+||+..+... ... ..+..+|.+++|+| |++|
T Consensus 12 ~~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~-------------~~~-----~~~~~~V~~l~fsp-g~~L 72 (902)
T 2oaj_A 12 NKYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEV-------------VIK-----LEDRSAIKEMRFVK-GIYL 72 (902)
T ss_dssp EEEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEE-------------EEE-----CSSCCCEEEEEEET-TTEE
T ss_pred cccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEE-------------EEE-----cCCCCCEEEEEEcC-CCEE
Confidence 3458999999999999999999999999999999754311 111 12467899999999 8899
Q ss_pred EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee-----------EEeeecc
Q 010759 229 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK-----------QQFEFHS 296 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~-----------~~~~~~~ 296 (502)
++++.|++|+|||+.. .....+. |.+.|++++|+|++++|++|+.||+|++||+.++... ..+..|.
T Consensus 73 ~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 73 VVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 9999999999999864 4445554 7789999999999999999999999999999987753 1224577
Q ss_pred cCeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcceeeecCC------------------CcceeEEEEcCCCCEEEEEe
Q 010759 297 GPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGH------------------QGEVNCVKWDPTGSLLASCS 356 (502)
Q Consensus 297 ~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~l~sgs 356 (502)
+++.++.|.+. ..+++++.|+.| +|++...+++..+.+| ...|.+++|+|+|.+|++|+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs 230 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIH 230 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEE
Confidence 88999999764 578889999999 9999999888887766 57799999999999999999
Q ss_pred CCCcEEEEeCCCCceeee--cc---c-------------CCCcEEEEEEccCCC---------C-CC-------------
Q 010759 357 DDVTAKIWNMKQDKYVHD--LR---E-------------HSKEIYTIRWSPTGS---------G-TN------------- 395 (502)
Q Consensus 357 ~dg~i~iwd~~~~~~~~~--~~---~-------------~~~~i~~~~~sp~g~---------~-~~------------- 395 (502)
.||+|++||+++++++.. +. . |...|++++|++... + ..
T Consensus 231 ~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 231 EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEec
Confidence 999999999998887642 21 1 244799999954210 0 00
Q ss_pred --------------------------------------------CC-----CCcEEEEEEeCCCeEEEEeCCCCeEEEE-
Q 010759 396 --------------------------------------------NP-----NQQLILASASFDSTVKLWDVELGKLLYS- 425 (502)
Q Consensus 396 --------------------------------------------~~-----~~~~~l~sgs~dg~i~iwd~~~~~~~~~- 425 (502)
.| .....+++++.||.|++||+.++.....
T Consensus 311 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~ 390 (902)
T 2oaj_A 311 GYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKA 390 (902)
T ss_dssp EECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCG
T ss_pred CCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCccccc
Confidence 00 0011456677889999999877644321
Q ss_pred ----------------------------------------eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010759 426 ----------------------------------------LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 465 (502)
Q Consensus 426 ----------------------------------------~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 465 (502)
+.+|...+.+++|+|++++||||+.|++|++||+.++.+.
T Consensus 391 ~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~ 470 (902)
T 2oaj_A 391 SLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQ 470 (902)
T ss_dssp GGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTT
T ss_pred ccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCcccc
Confidence 2344445555667899999999999999999999887532
Q ss_pred --EEE----------ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 466 --KTY----------TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 466 --~~~----------~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..+ .+...|.+++|+|||++||+|+.|++|+|||+.
T Consensus 471 ~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~ 518 (902)
T 2oaj_A 471 DNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYE 518 (902)
T ss_dssp TTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred CCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEec
Confidence 111 223579999999999999999999999999985
No 30
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.5e-41 Score=351.47 Aligned_cols=345 Identities=17% Similarity=0.258 Sum_probs=281.6
Q ss_pred Cceeeccccccc-eeEEEECC--CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 145 SDVTILEGHTSE-VCACAWSP--AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 145 ~~~~~l~~H~~~-V~~~~~sp--d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
.....+.+|... |++++|+| ++++||+|+.||.|++|++.++.... ........ ....+...|.+++|
T Consensus 54 ~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~-----~~~~~~~~----~~~~~~~~v~~~~~ 124 (615)
T 1pgu_A 54 PPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESN-----SVEVNVKS----EFQVLAGPISDISW 124 (615)
T ss_dssp CSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGT-----EEEEEEEE----EEECCSSCEEEEEE
T ss_pred ccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccc-----cccccccc----hhhcccccEEEEEE
Confidence 456789999999 99999999 99999999999999999986431100 00011111 22235678999999
Q ss_pred CCCCCEEEEEECC----CcEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 222 NGEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 222 s~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+|++++|++++.+ +.|++|+ .+.....+.+|...|++++|+|++. .|++++.|+.|++||+.+++....+..|.
T Consensus 125 s~~~~~l~~~~~~~~~~~~v~~~d-~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~ 203 (615)
T 1pgu_A 125 DFEGRRLCVVGEGRDNFGVFISWD-SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHH 203 (615)
T ss_dssp CTTSSEEEEEECCSSCSEEEEETT-TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSS
T ss_pred eCCCCEEEEeccCCCCccEEEEEE-CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccC
Confidence 9999999999988 7999999 4556778889999999999999998 89999999999999999999999999898
Q ss_pred c---CeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcceeee-c---CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 297 G---PTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTF-A---GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 297 ~---~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~-~---~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
. .+.++.|.++ ..+++++.|+.|++|++..++++..+ . +|...|.+++|+ ++.+|++++.|+.|++||+.
T Consensus 204 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~ 282 (615)
T 1pgu_A 204 KQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVT 282 (615)
T ss_dssp CTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETT
T ss_pred CCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECC
Confidence 8 8999999754 56888999999999999999998888 6 899999999999 99999999999999999998
Q ss_pred CCceeeecc---------------------------------------------cCCCcEEEEEEccC------------
Q 010759 368 QDKYVHDLR---------------------------------------------EHSKEIYTIRWSPT------------ 390 (502)
Q Consensus 368 ~~~~~~~~~---------------------------------------------~~~~~i~~~~~sp~------------ 390 (502)
+++.+..+. .|...|.+++| |+
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~-~~l~~~~~dg~i~~ 361 (615)
T 1pgu_A 283 TSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTV-NPLISGSYDGRIME 361 (615)
T ss_dssp TTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEET-TTTEEEETTSCEEE
T ss_pred CCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEe-cCcEEECCCCeEEE
Confidence 765543332 23333444443 22
Q ss_pred ---------------------CCCCC-----------C----------------CC-------------------C----
Q 010759 391 ---------------------GSGTN-----------N----------------PN-------------------Q---- 399 (502)
Q Consensus 391 ---------------------g~~~~-----------~----------------~~-------------------~---- 399 (502)
+.... . |+ .
T Consensus 362 w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 441 (615)
T 1pgu_A 362 WSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIK 441 (615)
T ss_dssp TTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred EEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceee
Confidence 11000 0 00 0
Q ss_pred --------------cEEEEEEeC-CCeEEEEeCCCCeEE-EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 400 --------------QLILASASF-DSTVKLWDVELGKLL-YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 400 --------------~~~l~sgs~-dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
..+|++++. ||.|++||+..++.. ..+.+|...|++++|+|+|++|++|+.||.|++|++.+++
T Consensus 442 ~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~ 521 (615)
T 1pgu_A 442 SVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSRE 521 (615)
T ss_dssp EEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred ecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCeEEEeeCCCCc
Confidence 225667777 888888888876665 6677899999999999999999999999999999999999
Q ss_pred eEEEEe--cCCCEEEEEECC----------CCCEEEEEECCCeEEEEEee
Q 010759 464 IVKTYT--GNGGIFEVCWNK----------EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ~~~~~~--~~~~i~~~~ws~----------~g~~la~~~~~~~v~v~~~~ 501 (502)
.+..+. +...|.+++|+| +|++||+|+.|++|+|||++
T Consensus 522 ~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~ 571 (615)
T 1pgu_A 522 VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVK 571 (615)
T ss_dssp EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESS
T ss_pred ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECC
Confidence 988876 456799999999 99999999999999999975
No 31
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.7e-42 Score=343.57 Aligned_cols=320 Identities=13% Similarity=0.188 Sum_probs=264.3
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..+++++|+|++++|++|+.|+.|++|++.++...... .. ...+....|++++++|++|+.|
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~-----------------~~-~~~~~~~~~~~~~~~l~~~~~d 118 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKML-----------------KR-ADYTAVDTAKLQMRRFILGTTE 118 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTS-----------------CS-CCEEEEEEECSSSCEEEEEETT
T ss_pred ccccceeeeecCCeEEEEEcCCcEEEEEecccceeeEE-----------------ec-CCceEEEEEecCCCEEEEEECC
Confidence 34568999999999999999999999998765332111 11 1334555789999999999999
Q ss_pred CcEEEEECCCce-eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEE
Q 010759 235 GQARIWSTNGDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFAT 312 (502)
Q Consensus 235 g~i~iw~~~~~~-~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 312 (502)
|.|++|+..... ...+.+|...|++++|+|++++|++|+.|++|++||+.+++....+..|...+.++.|.+ ...+++
T Consensus 119 g~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 198 (420)
T 3vl1_A 119 GDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLS 198 (420)
T ss_dssp SCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEE
T ss_pred CCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEE
Confidence 999999987544 445579999999999999999999999999999999999999999999999999999964 457889
Q ss_pred EcCCCeEEEEEcCCCcceeeecCC---Ccce---------------------eEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGH---QGEV---------------------NCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h---~~~v---------------------~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
++.|+.|++|++...+++..+..| ...+ .+++|+|++++|++|+.||.|++||+++
T Consensus 199 ~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~ 278 (420)
T 3vl1_A 199 ASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFS 278 (420)
T ss_dssp EETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTT
T ss_pred EcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCC
Confidence 999999999999999888887753 3344 4455678999999999999999999999
Q ss_pred Cceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeC-CCCCEEEEEECCCCCEE
Q 010759 369 DKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNG-HREPVYSLAFSPTGEYL 445 (502)
Q Consensus 369 ~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~-h~~~v~~l~~spdg~~l 445 (502)
++.+..+. .|...+.+++|+|++. .+|++|+.||.|++||+++++. +..+.+ |..+|+++.| |++++|
T Consensus 279 ~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-~~~~~l 349 (420)
T 3vl1_A 279 KEQTIQLPSKFTCSCNSLTVDGNNA--------NYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVYF-AAGALF 349 (420)
T ss_dssp CCEEEEECCTTSSCEEEEEECSSCT--------TEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEEE-ETTEEE
T ss_pred CceeEEcccccCCCceeEEEeCCCC--------CEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEEe-CCCCEE
Confidence 88776664 4788999999999875 2789999999999999998753 666665 6778888866 578899
Q ss_pred EEEeCCCcEEEEeCCCCee----------EEEEecCCCEEEEEECCCCC---EEEEEECCCeEEEEEee
Q 010759 446 ASGSLDKSMHIWSLKEGKI----------VKTYTGNGGIFEVCWNKEGD---KIAACFANHTVCVLDFR 501 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~~~----------~~~~~~~~~i~~~~ws~~g~---~la~~~~~~~v~v~~~~ 501 (502)
++++.||.|++|++..... .......+.|.+++|+|+|+ .|++++.+|.+.+|++.
T Consensus 350 ~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 350 VSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred EEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcCCceEEEEecc
Confidence 9999999999999876321 12223356789999999999 78888889999999874
No 32
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-41 Score=335.87 Aligned_cols=285 Identities=15% Similarity=0.250 Sum_probs=238.8
Q ss_pred eeeccccccceeEEEECCCC-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-C
Q 010759 147 VTILEGHTSEVCACAWSPAG-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-E 224 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~ 224 (502)
...+.+|...|++++|+|++ ++||+|+.|+.|+||++.++... . .. ....|...|.+++|+| +
T Consensus 66 ~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~----------~---~~--~~~~h~~~v~~~~~~~~~ 130 (383)
T 3ei3_B 66 HRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT----------S---FI--QGMGPGDAITGMKFNQFN 130 (383)
T ss_dssp EEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE----------E---EE--CCCSTTCBEEEEEEETTE
T ss_pred EEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc----------e---ee--ecCCcCCceeEEEeCCCC
Confidence 45788999999999999999 99999999999999999765421 0 01 1124678899999999 7
Q ss_pred CCEEEEEECCCcEEEEECCCceeEeecCC---CCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEE
Q 010759 225 GTLLATGSYDGQARIWSTNGDLKCTLSKH---KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLD 301 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~~~~~~~h---~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~ 301 (502)
+.+|++++.|+.|++|+..+.....+..| ...|.+++|+|++++|++|+.|+.|++||++ ++
T Consensus 131 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-~~-------------- 195 (383)
T 3ei3_B 131 TNQLFVSSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD-GH-------------- 195 (383)
T ss_dssp EEEEEEEETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT-SC--------------
T ss_pred CCEEEEEeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC-CC--------------
Confidence 89999999999999999987766666544 4889999999999999999999999999984 22
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCC----Cceeeecc
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQ----DKYVHDLR 376 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~----~~~~~~~~ 376 (502)
++..+.+|.+.|.+++|+|+++ +|++|+.|+.|++||+++ +.++..+
T Consensus 196 ---------------------------~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~- 247 (383)
T 3ei3_B 196 ---------------------------EIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM- 247 (383)
T ss_dssp ---------------------------EEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-
T ss_pred ---------------------------EEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-
Confidence 2234567889999999999999 999999999999999987 5566555
Q ss_pred cCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----------------CCEEEEEE
Q 010759 377 EHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----------------EPVYSLAF 438 (502)
Q Consensus 377 ~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----------------~~v~~l~~ 438 (502)
.|...|.+++|+| ++. +|++++.|+.|++||+++++.+..+.+|. ..+..++|
T Consensus 248 ~~~~~v~~~~~s~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 318 (383)
T 3ei3_B 248 PHEKPVNAAYFNPTDST---------KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGR 318 (383)
T ss_dssp ECSSCEEEEEECTTTSC---------EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEEC
T ss_pred cCCCceEEEEEcCCCCC---------EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEe
Confidence 6899999999999 876 78999999999999999887766665442 34455777
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+|+|++ +|+.||.|+|||+.+++.+..+.+ .+.+..++|+|+|++||+|+ |+.|.|||++
T Consensus 319 s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~~i~iw~~~ 381 (383)
T 3ei3_B 319 YPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GFNILIWNRE 381 (383)
T ss_dssp BCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TTEEEEEECC
T ss_pred cCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CCcEEEEecC
Confidence 777777 778999999999999999999875 23466679999999999997 8999999985
No 33
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.4e-40 Score=336.85 Aligned_cols=317 Identities=22% Similarity=0.355 Sum_probs=267.1
Q ss_pred eeeccccccce-eEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEV-CACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V-~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
...+.+|...| +++.| ++++|+||+.||+|++||+.++.. +..+ ..|...|.+++|++++
T Consensus 114 ~~~l~~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~-------------~~~~----~~h~~~V~~l~~~~~~ 174 (464)
T 3v7d_B 114 RTTLRGHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKF-------------LLQL----SGHDGGVWALKYAHGG 174 (464)
T ss_dssp EEEEECCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEE-------------EEEE----CCCSSCEEEEEECSTT
T ss_pred eEEEcCCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcE-------------EEEE----eCCCcCEEEEEEcCCC
Confidence 46789999885 56555 678999999999999999876531 1222 2467899999999988
Q ss_pred CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEec--CCCCEEEEecCCCeEEEEeccCcce--------------
Q 010759 226 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWN--KKGDYLLTGSCDKTAIVWDVKTEEW-------------- 288 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~--~~~~~l~sgs~D~~v~iwd~~~~~~-------------- 288 (502)
+|++|+.||.|++|+... .....+.+|..+|.+++|+ +++.+|++|+.|++|++||+.++..
T Consensus 175 -~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 253 (464)
T 3v7d_B 175 -ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVF 253 (464)
T ss_dssp -EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEE
T ss_pred -EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEe
Confidence 999999999999999864 5666788999999999998 5778999999999999999987653
Q ss_pred ---------eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC
Q 010759 289 ---------KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV 359 (502)
Q Consensus 289 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg 359 (502)
...+..|...+.++.. ....+++++.|+.|++|++...+++..+.+|...|.+++|+|+++++++|+.||
T Consensus 254 ~~~~~~~~~~~~~~~~~~~v~~~~~-~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg 332 (464)
T 3v7d_B 254 HTPEENPYFVGVLRGHMASVRTVSG-HGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDT 332 (464)
T ss_dssp SCGGGCTTEEEEECCCSSCEEEEEE-ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTS
T ss_pred eccCCCeEEEEEccCccceEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCC
Confidence 3345566667777654 345788899999999999999999999999999999999999999999999999
Q ss_pred cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEEC
Q 010759 360 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 360 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s 439 (502)
.|++||+.+++++..+..|...|.+++|++. +|++|+.||.|++||+.++....... |...+..++|+
T Consensus 333 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~-----------~l~s~s~dg~v~vwd~~~~~~~~~~~-~~~~~~~~~~~ 400 (464)
T 3v7d_B 333 TIRIWDLENGELMYTLQGHTALVGLLRLSDK-----------FLVSAAADGSIRGWDANDYSRKFSYH-HTNLSAITTFY 400 (464)
T ss_dssp CEEEEETTTTEEEEEECCCSSCEEEEEECSS-----------EEEEEETTSEEEEEETTTCCEEEEEE-CTTCCCEEEEE
T ss_pred cEEEEECCCCcEEEEEeCCCCcEEEEEEcCC-----------EEEEEeCCCcEEEEECCCCceeeeec-CCCCccEEEEE
Confidence 9999999999999999999999999999742 78999999999999999988777765 66778889999
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCeeEEEE--ecCCCEEEEEECCCCCEEEEEECCCeEEEE
Q 010759 440 PTGEYLASGSLDKSMHIWSLKEGKIVKTY--TGNGGIFEVCWNKEGDKIAACFANHTVCVL 498 (502)
Q Consensus 440 pdg~~lasgs~Dg~i~iw~~~~~~~~~~~--~~~~~i~~~~ws~~g~~la~~~~~~~v~v~ 498 (502)
|++++|++|+ ||.|++||+.+++++..+ .+...|.+++|+ ....+++++.++.+.++
T Consensus 401 ~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~-~~~l~~~~~~~g~~~i~ 459 (464)
T 3v7d_B 401 VSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFK-GKTLVAAVEKDGQSFLE 459 (464)
T ss_dssp ECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEE-TTEEEEEEEETTEEEEE
T ss_pred eCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEec-CCEEEEEEEeCCeEEEE
Confidence 9999999999 899999999999998763 335569999997 33455555667766544
No 34
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=6.8e-41 Score=362.75 Aligned_cols=327 Identities=22% Similarity=0.328 Sum_probs=281.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.+.+.+|...|++++|||+|++||+|+.||.|+|||+.++.. +..+ ..|..+|.+++|+|+++
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~-------------~~~~----~~~~~~v~~~~~s~~~~ 68 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVE-------------VRSI----QVTETPVRAGKFIARKN 68 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEE----ECCSSCEEEEEEEGGGT
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCce-------------EEEE----ecCCCcEEEEEEeCCCC
Confidence 467899999999999999999999999999999999876531 1122 23567899999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc-ceeEEeeecccCeEEEec
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~~ 304 (502)
+|++|+.||.|++|+.. +.....+.+|.+.|++++|+|++.+|++|+.||+|++||+.++ .....+..|..++.++.|
T Consensus 69 ~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~ 148 (814)
T 3mkq_A 69 WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF 148 (814)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE
Confidence 99999999999999976 4566788899999999999999999999999999999999887 667788889999999999
Q ss_pred CC--CceEEEEcCCCeEEEEEcCCCcceeeecCCC-cceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeecccCC
Q 010759 305 RN--NVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS 379 (502)
Q Consensus 305 ~~--~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~ 379 (502)
.+ ...+++++.|+.|++|++....+...+..+. ..+.+++|+| ++.+|++|+.||.|++||+.++..+..+..|.
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~ 228 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHM 228 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCC
Confidence 75 4578899999999999998888777776655 8899999999 99999999999999999999999999999999
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC--EEEEEeCCCcEEEE
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE--YLASGSLDKSMHIW 457 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~--~lasgs~Dg~i~iw 457 (502)
..|.+++|+|++. +|++|+.||.|++||+.+++.+..+..|...|++++|+|+|. ++++++ ++.+.+|
T Consensus 229 ~~v~~~~~~~~~~---------~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~ 298 (814)
T 3mkq_A 229 SNVSFAVFHPTLP---------IIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGF-DNGFTVL 298 (814)
T ss_dssp SCEEEEEECSSSS---------EEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE-TTEEEEE
T ss_pred CCEEEEEEcCCCC---------EEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe-CCCEEEE
Confidence 9999999999986 789999999999999999999999999999999999999987 455555 6678888
Q ss_pred eCCCCeeEEEEe--------------------------------------------cCCCEEEEEECCCCCEEEEEECCC
Q 010759 458 SLKEGKIVKTYT--------------------------------------------GNGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 458 ~~~~~~~~~~~~--------------------------------------------~~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
++..+.....+. ....+.+++|+|+|++||+++ ++
T Consensus 299 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~ 377 (814)
T 3mkq_A 299 SLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQDEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DG 377 (814)
T ss_dssp ECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCSSSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TT
T ss_pred EcCCCCceeEECCCCCEEEECcccccceeeeeeecccccccccCccceeeeecCCCCccCCceeEECCCCCEEEEec-CC
Confidence 876432211110 011357899999999999998 88
Q ss_pred eEEEEEee
Q 010759 494 TVCVLDFR 501 (502)
Q Consensus 494 ~v~v~~~~ 501 (502)
.+.||+++
T Consensus 378 ~~~i~~~~ 385 (814)
T 3mkq_A 378 EYVIYTAL 385 (814)
T ss_dssp EEEEEETT
T ss_pred EEEEEECc
Confidence 99999853
No 35
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=323.32 Aligned_cols=246 Identities=25% Similarity=0.458 Sum_probs=221.5
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
..+.+|...|.+++|+|++.+++||+.|++|++||+.++.. +..+. .+...+.+++|+|++++
T Consensus 74 ~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~-------------~~~~~----~~~~~~~~~~~spdg~~ 136 (321)
T 3ow8_A 74 WSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQ-------------IKSID----AGPVDAWTLAFSPDSQY 136 (321)
T ss_dssp EEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEE-------------EEEEE----CCTTCCCCEEECTTSSE
T ss_pred eeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCE-------------EEEEe----CCCccEEEEEECCCCCE
Confidence 46889999999999999999999999999999999976532 11221 23567889999999999
Q ss_pred EEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 228 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
|++|+.||.|++|+... .....+..|...|.+++|+|++++|++|+.|++|++||+++++.
T Consensus 137 l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~------------------ 198 (321)
T 3ow8_A 137 LATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKL------------------ 198 (321)
T ss_dssp EEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEE------------------
T ss_pred EEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE------------------
Confidence 99999999999999864 45567788999999999999999999999999999999987643
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
+..+.+|...|.+++|+|++++|++|+.|++|++||++++..+..+.+|...|.+++
T Consensus 199 -----------------------~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~ 255 (321)
T 3ow8_A 199 -----------------------LHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVA 255 (321)
T ss_dssp -----------------------EEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEE
T ss_pred -----------------------EEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEE
Confidence 234567888999999999999999999999999999999999999999999999999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
|+|++. +|++|+.|++|++||+.+++++.++.+|...|++++|+|+|++|++++.||.|+|||..
T Consensus 256 ~sp~~~---------~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 256 FCPDDT---------HFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp ECTTSS---------EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCEEEEECC
T ss_pred ECCCCC---------EEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeEEEEeCC
Confidence 999986 79999999999999999999999999999999999999999999999999999999963
No 36
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4.7e-41 Score=326.04 Aligned_cols=252 Identities=19% Similarity=0.264 Sum_probs=208.3
Q ss_pred cccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEE
Q 010759 151 EGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLAT 230 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~s 230 (502)
..|..+|++++|+|++ .|++|+.||+|+|||+.++.... . ......+|...|++++|+|+|++|++
T Consensus 79 ~~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~----------~---~~~~~~~H~~~V~~v~~spdg~~l~s 144 (344)
T 4gqb_B 79 VQTEAGVADLTWVGER-GILVASDSGAVELWELDENETLI----------V---SKFCKYEHDDIVSTVSVLSSGTQAVS 144 (344)
T ss_dssp EEESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCE----------E---EEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred eccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCcee----------E---eeccccCCCCCEEEEEECCCCCEEEE
Confidence 3467889999999985 68899999999999998765321 1 11112346788999999999999999
Q ss_pred EECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 231 GSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 231 g~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
|+.|++|++||+.. .....+.+|.+.|++++|+|++. +|++|+.|++|++||+++++....+.
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~--------------- 209 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG--------------- 209 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC---------------
T ss_pred EeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee---------------
Confidence 99999999999864 56678899999999999999884 78999999999999998876543321
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEE
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW 387 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~ 387 (502)
...|...+.+++|+|+ +++|++|+.||+|+|||+++++++..+.+|...|++++|
T Consensus 210 ------------------------~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 210 ------------------------CSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp ----------------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred ------------------------cceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 1234456889999995 578899999999999999999999999999999999999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEeCCCCee
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~~~ 464 (502)
+|++. .+|++|+.|++|+|||+.+++++ .+.+|...|++|+|+|+++ +|++||.||+|++|++.+..+
T Consensus 266 sp~g~--------~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 266 SPHSV--------PFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSSS--------CCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC---
T ss_pred ccCCC--------eEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCCC
Confidence 99874 27899999999999999988764 6789999999999999986 577999999999999987554
No 37
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=1.5e-40 Score=376.10 Aligned_cols=336 Identities=21% Similarity=0.344 Sum_probs=285.3
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...+.+|...|++++|||+|++||+|+.||+|++|++.++.. +..+ ..|...|.+++|+|+++
T Consensus 608 ~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~-------------~~~~----~~h~~~v~~~~~s~~~~ 670 (1249)
T 3sfz_A 608 RLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEK-------------LLDI----KAHEDEVLCCAFSSDDS 670 (1249)
T ss_dssp SEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEECTTSS
T ss_pred eEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCE-------------EEEe----ccCCCCEEEEEEecCCC
Confidence 457889999999999999999999999999999999987642 1122 24678899999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecC--CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+|++|+.||.|++||.. +.....+.+|...|++++|+| ++.++++|+.|++|++||+.++.....+..|...+.++.
T Consensus 671 ~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~ 750 (1249)
T 3sfz_A 671 YIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCR 750 (1249)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEE
T ss_pred EEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEE
Confidence 99999999999999986 456778899999999999999 456899999999999999999999999999999999999
Q ss_pred cCC-CceEEEEcCCCeEEEEEcCCCcceee--------------------------------------------------
Q 010759 304 WRN-NVSFATSSTDNMIYVCKIGENRPIKT-------------------------------------------------- 332 (502)
Q Consensus 304 ~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~-------------------------------------------------- 332 (502)
|.+ ...+++++.|+.|++|++........
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 865 45788999999999999865432221
Q ss_pred -----ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCC-------------
Q 010759 333 -----FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGT------------- 394 (502)
Q Consensus 333 -----~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~------------- 394 (502)
..+|.+.|.+++|+|++.++++++.||.|++||+.++..+..+.+|...|.+++|+|++...
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~ 910 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWE 910 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred ceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 12678899999999999999999999999999999999999999999999999999987510
Q ss_pred ----------------------------------------------------------CCCCCcEEEEEEeCCCeEEEEe
Q 010759 395 ----------------------------------------------------------NNPNQQLILASASFDSTVKLWD 416 (502)
Q Consensus 395 ----------------------------------------------------------~~~~~~~~l~sgs~dg~i~iwd 416 (502)
..|+. .++++|+.+|.|++||
T Consensus 911 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g-~~l~~g~~~g~i~i~d 989 (1249)
T 3sfz_A 911 TKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL-EYVAFGDEDGAIKIIE 989 (1249)
T ss_dssp HHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS-SEEEEEETTSCCEEEE
T ss_pred ccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC-CEEEEEcCCCCEEEEE
Confidence 00111 1345566666666666
Q ss_pred CCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 417 VELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 417 ~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
+.+++.+..+.+|...|++++|+|+|++|++++.||.|++|++.+++.+....+...+.+++|+|++ .+++++.|++|.
T Consensus 990 ~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~v~~~~~~~~~-~l~~~~~dg~v~ 1068 (1249)
T 3sfz_A 990 LPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQTGDYVFLQAHQETVKDFRLLQDS-RLLSWSFDGTVK 1068 (1249)
T ss_dssp TTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETTTTEEECCBCCSSCEEEEEECSSS-EEEEEESSSEEE
T ss_pred cCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCceEEEecCCCcEEEEEEcCCC-cEEEEECCCcEE
Confidence 6667777778889999999999999999999999999999999999887666666789999999976 678899999999
Q ss_pred EEEee
Q 010759 497 VLDFR 501 (502)
Q Consensus 497 v~~~~ 501 (502)
+||++
T Consensus 1069 vwd~~ 1073 (1249)
T 3sfz_A 1069 VWNVI 1073 (1249)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99974
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=4.5e-41 Score=332.98 Aligned_cols=295 Identities=21% Similarity=0.330 Sum_probs=253.6
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC--
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 224 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-- 224 (502)
...+.+|...|++++|+| ++|++|+.||+|++|++.++....... .. .. ...|...|.+++|+|+
T Consensus 9 ~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~----~~---~~----~~~h~~~v~~~~~~~~~~ 75 (397)
T 1sq9_A 9 ANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKD----KS---YS----HFVHKSGLHHVDVLQAIE 75 (397)
T ss_dssp EEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGG----GE---EE----EECCTTCEEEEEEEEEEE
T ss_pred hhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCC----cc---eE----EecCCCcEEEEEEecccc
Confidence 467889999999999999 899999999999999998754211000 01 11 1245778999999999
Q ss_pred --C---CEEEEEECCCcEEEEECCCce------eEeecCC-----CCCEEEEEec----CCCCE-EEEecCCCeEEEEec
Q 010759 225 --G---TLLATGSYDGQARIWSTNGDL------KCTLSKH-----KGPIFSLKWN----KKGDY-LLTGSCDKTAIVWDV 283 (502)
Q Consensus 225 --~---~~l~sg~~dg~i~iw~~~~~~------~~~~~~h-----~~~V~~l~~~----~~~~~-l~sgs~D~~v~iwd~ 283 (502)
+ .+|++++.||.|++|+..... ...+..| ...|++++|+ |++++ |++|+.|+.|++||+
T Consensus 76 ~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~ 155 (397)
T 1sq9_A 76 RDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKF 155 (397)
T ss_dssp TTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEE
T ss_pred cCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeC
Confidence 9 999999999999999976433 6677888 5999999999 99999 999999999999999
Q ss_pred cC------cceeE-----Eee-------ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC---C---Ccc
Q 010759 284 KT------EEWKQ-----QFE-------FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG---H---QGE 339 (502)
Q Consensus 284 ~~------~~~~~-----~~~-------~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~---h---~~~ 339 (502)
.+ +.... .+. .|...+.++.|.++..+++++.|+.|++|++...+++..+.+ | ...
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~ 235 (397)
T 1sq9_A 156 HPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNS 235 (397)
T ss_dssp ESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCC
T ss_pred CccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCCceeEEEeccccccccCCc
Confidence 98 66555 663 367788899886544788899999999999999999999998 9 999
Q ss_pred eeEEEEcCCCCEEEEEeCC---CcEEEEeCCCCceeeeccc-------------CCCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 340 VNCVKWDPTGSLLASCSDD---VTAKIWNMKQDKYVHDLRE-------------HSKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~-------------~~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
|.+++|+|++++|++++.| |.|++||+++++.+..+.. |...|.+++|+|++. +|
T Consensus 236 i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l 306 (397)
T 1sq9_A 236 IRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE---------TL 306 (397)
T ss_dssp EEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS---------EE
T ss_pred cceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC---------EE
Confidence 9999999999999999999 9999999999999999988 999999999999886 78
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEee------CC---------------CCCEEEEEECCCC----------CEEEEEeCCC
Q 010759 404 ASASFDSTVKLWDVELGKLLYSLN------GH---------------REPVYSLAFSPTG----------EYLASGSLDK 452 (502)
Q Consensus 404 ~sgs~dg~i~iwd~~~~~~~~~~~------~h---------------~~~v~~l~~spdg----------~~lasgs~Dg 452 (502)
++|+.||.|++||+.+++++..+. +| ..+|++++|+|+| ++|++|+.||
T Consensus 307 ~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg 386 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR 386 (397)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT
T ss_pred EEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC
Confidence 999999999999999999999999 88 9999999999998 7999999999
Q ss_pred cEEEEeCCCCe
Q 010759 453 SMHIWSLKEGK 463 (502)
Q Consensus 453 ~i~iw~~~~~~ 463 (502)
.|++|++.+|+
T Consensus 387 ~i~iw~~~~g~ 397 (397)
T 1sq9_A 387 SIRWFREAGGK 397 (397)
T ss_dssp EEEEEEEEC--
T ss_pred cEEEEEcCCCC
Confidence 99999998764
No 39
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-41 Score=363.90 Aligned_cols=333 Identities=9% Similarity=0.093 Sum_probs=250.4
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeee---cccccCCCCeEEEEECC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK---GRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~V~~l~~s~ 223 (502)
+..+. |...|++++|+|++++|++|+.||+|++||+.++... .+.+.... .....|..+|.+++|+|
T Consensus 92 ~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~---------~~~i~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 92 LTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS---------SFKLDNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE---------EEEECCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc---------cceeccccccccccccCCCCeEEEEEcc
Confidence 34454 6789999999999999999999999999999765311 00000000 12245678999999999
Q ss_pred C-CCEEEEEECCCcEEEEECCCc-eeEeecCC------------------CCCEEEEEecCCCCEEEEecCCCeEEEEec
Q 010759 224 E-GTLLATGSYDGQARIWSTNGD-LKCTLSKH------------------KGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 224 ~-~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h------------------~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~ 283 (502)
+ +.+|++|+.||.| +||+... ....+..| ...|++++|+|+|.+|++|+.|++|++||+
T Consensus 162 ~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~ 240 (902)
T 2oaj_A 162 RDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDA 240 (902)
T ss_dssp TEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEEC
Confidence 6 5789999999999 9998754 34445444 578999999999999999999999999999
Q ss_pred cCcceeEE--ee---ec-------------ccCeEEEecC----CC--c-------------------------------
Q 010759 284 KTEEWKQQ--FE---FH-------------SGPTLDVDWR----NN--V------------------------------- 308 (502)
Q Consensus 284 ~~~~~~~~--~~---~~-------------~~~~~~~~~~----~~--~------------------------------- 308 (502)
++++.+.. +. .| ..++..+.|. ++ .
T Consensus 241 ~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s 320 (902)
T 2oaj_A 241 NSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITS 320 (902)
T ss_dssp TTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCC
T ss_pred CCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccc
Confidence 88776542 10 01 2234444441 10 1
Q ss_pred ---------------------------------------------eEEEEcCCCeEEEEEcCCCcceee-----------
Q 010759 309 ---------------------------------------------SFATSSTDNMIYVCKIGENRPIKT----------- 332 (502)
Q Consensus 309 ---------------------------------------------~~~~~~~d~~i~~~~~~~~~~~~~----------- 332 (502)
.+++.+.|+.|++|++.++.++..
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~ 400 (902)
T 2oaj_A 321 YEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWL 400 (902)
T ss_dssp HHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTB
T ss_pred hhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCccccc
Confidence 123333456666676644322111
Q ss_pred ------------------------------ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee------ecc
Q 010759 333 ------------------------------FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH------DLR 376 (502)
Q Consensus 333 ------------------------------~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~------~~~ 376 (502)
+.||...+.+++|+|++++|+||+.|++|++||+.++.... .+.
T Consensus 401 ~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~ 480 (902)
T 2oaj_A 401 RPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLS 480 (902)
T ss_dssp TTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHH
T ss_pred CCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEecCCCcEEEEECCCccccCCceEEeech
Confidence 23344445556678999999999999999999998774321 111
Q ss_pred -----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-------------------------------
Q 010759 377 -----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------------------------- 420 (502)
Q Consensus 377 -----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------------------------- 420 (502)
.|...|.+++|+|++. +||+|+.||+|+|||+.++
T Consensus 481 ~~~~~~h~~~V~svafspdg~---------~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 551 (902)
T 2oaj_A 481 RTLNKAKELAVDKISFAAETL---------ELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLV 551 (902)
T ss_dssp HHTTCSSSCCEEEEEEETTTT---------EEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEE
T ss_pred hhcCCCCCCceeEEEecCCCC---------eEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccc
Confidence 6888999999999997 8999999999999998765
Q ss_pred --------------eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-----Ee-c-CCCEEEEEE
Q 010759 421 --------------KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-----YT-G-NGGIFEVCW 479 (502)
Q Consensus 421 --------------~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-----~~-~-~~~i~~~~w 479 (502)
+++..+.+|.++|++|+||||| +||+|+.|++|+|||+.++.++.. +. + ...|++++|
T Consensus 552 ~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~F 630 (902)
T 2oaj_A 552 DVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEF 630 (902)
T ss_dssp ECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEE
T ss_pred cccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEE
Confidence 3467888999999999999999 999999999999999988877642 21 3 345999999
Q ss_pred C-----CCC---CEEEEEECCCeEEEEEe
Q 010759 480 N-----KEG---DKIAACFANHTVCVLDF 500 (502)
Q Consensus 480 s-----~~g---~~la~~~~~~~v~v~~~ 500 (502)
+ ||| .+||+|+.|++|++||+
T Consensus 631 s~~~~~~Dg~~~~~l~sgs~D~tv~~wd~ 659 (902)
T 2oaj_A 631 VIMEYGDDGYSSILMVCGTDMGEVITYKI 659 (902)
T ss_dssp EEEECTTSSSEEEEEEEEETTSEEEEEEE
T ss_pred EEEecCCCCCcceEEEEEecCCcEEEEEE
Confidence 9 886 89999999999999998
No 40
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=2e-41 Score=331.10 Aligned_cols=293 Identities=19% Similarity=0.343 Sum_probs=243.5
Q ss_pred eeccccccceeEEEECCC----CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 148 TILEGHTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd----~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
..+.+|..+|++++|+|+ ..++++++.++.|++|++.++... ..+.... ...+...|++++|+|
T Consensus 12 ~~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~----------~~~~~~~--~~~~~~~v~~~~~~~ 79 (366)
T 3k26_A 12 SLKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI----------RLLQSYV--DADADENFYTCAWTY 79 (366)
T ss_dssp EEECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE----------EEEEEEE--CSCTTCCEEEEEEEE
T ss_pred EeecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE----------Eeeeecc--ccCCCCcEEEEEecc
Confidence 355689999999999994 456777777889999998765321 1111111 123567899999999
Q ss_pred C----CCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeeccc
Q 010759 224 E----GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 224 ~----~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
+ +.+|++|+.||.|++|+.. +.....+.+|..+|++++|+| ++++|++|+.|++|++||+++++....+
T Consensus 80 ~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----- 154 (366)
T 3k26_A 80 DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIF----- 154 (366)
T ss_dssp CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEE-----
T ss_pred CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEe-----
Confidence 9 7799999999999999976 456677889999999999999 8999999999999999999876543222
Q ss_pred CeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 298 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
..+.+|...|.+++|+|++.+|++++.||.|++||+++++.+..+..
T Consensus 155 ---------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~ 201 (366)
T 3k26_A 155 ---------------------------------GGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKE 201 (366)
T ss_dssp ---------------------------------CSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHH
T ss_pred ---------------------------------cccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccce
Confidence 11357888999999999999999999999999999998766554443
Q ss_pred ----------------------------CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--------
Q 010759 378 ----------------------------HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK-------- 421 (502)
Q Consensus 378 ----------------------------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-------- 421 (502)
|...|.+++|+ +. +|++++.||.|++||+.++.
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~---------~l~~~~~d~~i~~wd~~~~~~~~~~~~~ 270 (366)
T 3k26_A 202 SYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GD---------LILSKSCENAIVCWKPGKMEDDIDKIKP 270 (366)
T ss_dssp HHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TT---------EEEEECSSSEEEEEEESSTTCCGGGCCT
T ss_pred eEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CC---------EEEEEecCCEEEEEeCCCcccccccccc
Confidence 88899999998 32 78999999999999988763
Q ss_pred ------EEEEeeCCCCCEEEEEECCC--CCEEEEEeCCCcEEEEeCCCCee----EEEEecC---CCEEEEEECCCCCEE
Q 010759 422 ------LLYSLNGHREPVYSLAFSPT--GEYLASGSLDKSMHIWSLKEGKI----VKTYTGN---GGIFEVCWNKEGDKI 486 (502)
Q Consensus 422 ------~~~~~~~h~~~v~~l~~spd--g~~lasgs~Dg~i~iw~~~~~~~----~~~~~~~---~~i~~~~ws~~g~~l 486 (502)
.+..+.+|...|++++|+|+ +++|++|+.||.|++|++.+++. ...+.++ ..|.+++|+|+|++|
T Consensus 271 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 350 (366)
T 3k26_A 271 SESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSIL 350 (366)
T ss_dssp TCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEE
T ss_pred CCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeE
Confidence 47888999999999999999 99999999999999999998753 3466654 679999999999999
Q ss_pred EEEECCCeEEEEEee
Q 010759 487 AACFANHTVCVLDFR 501 (502)
Q Consensus 487 a~~~~~~~v~v~~~~ 501 (502)
|+|+.||.|+|||+.
T Consensus 351 ~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 351 IAVCDDASIWRWDRL 365 (366)
T ss_dssp EEEETTSEEEEEEC-
T ss_pred EEEeCCCEEEEEEec
Confidence 999999999999985
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.4e-40 Score=326.14 Aligned_cols=291 Identities=16% Similarity=0.242 Sum_probs=243.9
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
.+..|..+|++++|+|++++||+|+.|+.|++|++.++. ......+ ..|...|.+++|+|++++|
T Consensus 3 ~~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~-----------~~~~~~~----~~h~~~v~~~~~~~~~~~l 67 (372)
T 1k8k_C 3 YHSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNK-----------WVQVHEL----KEHNGQVTGVDWAPDSNRI 67 (372)
T ss_dssp EEESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTE-----------EEEEEEE----ECCSSCEEEEEEETTTTEE
T ss_pred eecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCc-----------EEeeeee----cCCCCcccEEEEeCCCCEE
Confidence 345699999999999999999999999999999987642 0111222 2457789999999999999
Q ss_pred EEEECCCcEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 229 ATGSYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
++++.||.|++|+..... ...+..|...|.+++|+|++++|++|+.|+.|++||+.++......
T Consensus 68 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~------------- 134 (372)
T 1k8k_C 68 VTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVC------------- 134 (372)
T ss_dssp EEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEE-------------
T ss_pred EEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceee-------------
Confidence 999999999999986543 3345779999999999999999999999999999998765421100
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeC------------------C
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM------------------K 367 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~------------------~ 367 (502)
.....+|...|.+++|+|++++|++|+.||.|++||+ .
T Consensus 135 ------------------------~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~ 190 (372)
T 1k8k_C 135 ------------------------KHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMP 190 (372)
T ss_dssp ------------------------EEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCC
T ss_pred ------------------------eeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccc
Confidence 1123467889999999999999999999999999995 3
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
.+..+..+..|...+.+++|+|++. +|++++.||.|++||+++++++..+..|..+|++++|+|++.+|++
T Consensus 191 ~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 261 (372)
T 1k8k_C 191 FGELMFESSSSCGWVHGVCFSANGS---------RVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAA 261 (372)
T ss_dssp TTCEEEECCCCSSCEEEEEECSSSS---------EEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEE
T ss_pred hhhheEecCCCCCeEEEEEECCCCC---------EEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEE
Confidence 6778888889999999999999886 7899999999999999999999999999999999999999999888
Q ss_pred EeCCCcEEEEeCCC--Cee--E------------------------------------EEE--ecCCCEEEEEEC-CCC-
Q 010759 448 GSLDKSMHIWSLKE--GKI--V------------------------------------KTY--TGNGGIFEVCWN-KEG- 483 (502)
Q Consensus 448 gs~Dg~i~iw~~~~--~~~--~------------------------------------~~~--~~~~~i~~~~ws-~~g- 483 (502)
| .|+.|++|++.+ ++. + ..+ .+...|.+++|+ ++|
T Consensus 262 ~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~ 340 (372)
T 1k8k_C 262 G-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKA 340 (372)
T ss_dssp E-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTT
T ss_pred E-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCc
Confidence 8 899999999987 531 0 111 234569999977 677
Q ss_pred --CEEEEEECCCeEEEEEee
Q 010759 484 --DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 484 --~~la~~~~~~~v~v~~~~ 501 (502)
++||+|+.||.|+|||++
T Consensus 341 ~~~~l~s~~~Dg~i~~W~~~ 360 (372)
T 1k8k_C 341 KCSQFCTTGMDGGMSIWDVR 360 (372)
T ss_dssp SCSEEEEEETTSEEEEEEHH
T ss_pred ceeeEEEecCCCceEEEEec
Confidence 999999999999999974
No 42
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=5.5e-42 Score=387.86 Aligned_cols=343 Identities=21% Similarity=0.302 Sum_probs=292.3
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCC-ce------------------EEEEEeee
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGP-LN------------------VLVLKHVK 206 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~-~~------------------~~~~~~~~ 206 (502)
.+..+.+|...|++++|+|+|++|+|++.|++|++|++.+........... .. ........
T Consensus 874 ~~~~~~~h~~~v~~v~~spdg~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 953 (1249)
T 3sfz_A 874 KVADCRGHLSWVHGVMFSPDGSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKT 953 (1249)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESS
T ss_pred eeeecCCCccceEEEEECCCCCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCc
Confidence 345678999999999999999999999999999999976432111100000 00 00000000
Q ss_pred -cccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc
Q 010759 207 -GRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 207 -~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~ 284 (502)
.........|.+++|+|+++++++|+.+|.|++|+... .....+.+|...|++++|+|++++|++++.|++|++||+.
T Consensus 954 ~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vwd~~ 1033 (1249)
T 3sfz_A 954 GQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVWNWQ 1033 (1249)
T ss_dssp CCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEEETT
T ss_pred ceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 00112345799999999999999999999999999864 5566788999999999999999999999999999999999
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
+++... +..|...+.++.|..+..+++++.|+.|++|++.+++.+..+.+|.+.|.+++|+|+++++++++.||+|++|
T Consensus 1034 ~~~~~~-~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iw 1112 (1249)
T 3sfz_A 1034 TGDYVF-LQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIW 1112 (1249)
T ss_dssp TTEEEC-CBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEE
T ss_pred CCceEE-EecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEE
Confidence 987653 4577888999999888899999999999999999999999999999999999999999999999999999999
Q ss_pred eCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe---------eCCCCCEEE
Q 010759 365 NMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL---------NGHREPVYS 435 (502)
Q Consensus 365 d~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~---------~~h~~~v~~ 435 (502)
|+.++.++..+..|...|++++|+|++. +|++|+.||.|++||+.+++.+..+ .+|..+|++
T Consensus 1113 d~~~~~~~~~l~~h~~~v~~~~~s~dg~---------~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 1183 (1249)
T 3sfz_A 1113 SFDLLSPLHELKGHNGCVRCSAFSLDGI---------LLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTD 1183 (1249)
T ss_dssp CSSSSSCSBCCCCCSSCEEEEEECSSSS---------EEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCCE
T ss_pred ECCCcceeeeeccCCCcEEEEEECCCCC---------EEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEEE
Confidence 9999999999999999999999999986 8999999999999999998876654 678999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++|+|+|++|++++ |.|++|++.+++.+..+.. ...|.+++|+|+|++|++++.+|.|+||++
T Consensus 1184 l~fs~dg~~l~s~~--g~v~vwd~~~g~~~~~~~~~~~~i~~~~~s~dg~~l~~~~~dg~v~vw~l 1247 (1249)
T 3sfz_A 1184 VCFSPDSKTLVSAG--GYLKWWNVATGDSSQTFYTNGTNLKKIHVSPDFRTYVTVDNLGILYILQV 1247 (1249)
T ss_dssp EEECTTSSCEEEES--SSEEEBCSSSCBCCCCCCCSSCCCCCCEECSSSCCEEEECTTCCEEEECC
T ss_pred EEECCCCCEEEECC--CeEEEEECCCCceeeeeeccCCcccEEEECCCCCEEEEecCCcEEEEEee
Confidence 99999999999986 8999999999998888765 456899999999999999999999999986
No 43
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.2e-42 Score=350.19 Aligned_cols=323 Identities=15% Similarity=0.135 Sum_probs=242.0
Q ss_pred cccceeEEEECCCC---------CEEEE-------------------EeCCCcEEEEecCCCCCCCCCCCCCceEEEEEe
Q 010759 153 HTSEVCACAWSPAG---------SLLAS-------------------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH 204 (502)
Q Consensus 153 H~~~V~~~~~spd~---------~~l~s-------------------gs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~ 204 (502)
+.+.|.+|+|+|++ ++||+ |+.|++|+||++.++... ......
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~---------~~~~~~ 202 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLH---------CVKVQT 202 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCC---------EEEEEE
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCC---------ceEEEE
Confidence 56777888887765 45555 668899999998765321 000011
Q ss_pred eecccccCCCCeEEEEECCC------CCEEEEEECCCcEEEEECCCce------------eEeecCCCCCEEEEEecCCC
Q 010759 205 VKGRTNEKSKDVTTLDWNGE------GTLLATGSYDGQARIWSTNGDL------------KCTLSKHKGPIFSLKWNKKG 266 (502)
Q Consensus 205 ~~~~~~~~~~~V~~l~~s~~------~~~l~sg~~dg~i~iw~~~~~~------------~~~~~~h~~~V~~l~~~~~~ 266 (502)
+ ..+...|.+++|+|+ +.+|++|+.||+|+||++.... ...+.+|...|++++|+++
T Consensus 203 l----~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~- 277 (524)
T 2j04_B 203 I----VHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP- 277 (524)
T ss_dssp E----EECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS-
T ss_pred E----EecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC-
Confidence 1 124567999999996 5799999999999999986431 2367789999999999986
Q ss_pred CEEEEecCCCeEEEEeccCcc-eeEEeeecccCeEEE--ecCCC--ceEEEEcCCCeEEEEEcCCCcceeeecCCCc--c
Q 010759 267 DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDV--DWRNN--VSFATSSTDNMIYVCKIGENRPIKTFAGHQG--E 339 (502)
Q Consensus 267 ~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~--~ 339 (502)
..|++|+.||+|++||++++. ....+..|..+|.++ .|..+ ..+++++.|++|++|+++..+++..+.+|.. .
T Consensus 278 ~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 278 TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 489999999999999998764 445678899999998 46654 5789999999999999998887777777763 5
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 340 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
|.+++|+|+++.+++++.|++|++||++++.++..+.+|...|++++|+|++. +|++|+.||+|++||+..
T Consensus 358 v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~---------~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHP---------MVLAGSADGSLIITNAAR 428 (524)
T ss_dssp CCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCC---------BCEEEETTTEEECCBSCS
T ss_pred ccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCC---------eEEEEECCCEEEEEechH
Confidence 88999999999999999999999999999988888889999999999999986 689999999999999864
Q ss_pred CeEEEEeeC-----CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEecC-CCEEEEEECCCCC---EEEEE
Q 010759 420 GKLLYSLNG-----HREPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTGN-GGIFEVCWNKEGD---KIAAC 489 (502)
Q Consensus 420 ~~~~~~~~~-----h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~~-~~i~~~~ws~~g~---~la~~ 489 (502)
+ .+..++. +...|++++|+|+|..+. .. | .+++|... ++..+.++.++ ..|++|+|||++. .||+|
T Consensus 429 ~-~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~-~~-~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg 504 (524)
T 2j04_B 429 R-LLHGIKNSSATQKSLRLWKWDYSIKDDKYR-ID-S-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFS 504 (524)
T ss_dssp S-TTTCC------CCCCEEEECBCCSSSCEEE-EC-C-CCCCCC-------------CCCSCCCEEECCSTTTTTEEEEE
T ss_pred h-hccccccCccceeeeEEEEeccCCCCCeEE-cc-C-CceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhh
Confidence 3 2111111 112578999999998653 22 2 23444433 45566666554 5799999999964 99999
Q ss_pred ECCCeEEEEEeeC
Q 010759 490 FANHTVCVLDFRM 502 (502)
Q Consensus 490 ~~~~~v~v~~~~~ 502 (502)
+.+|.|+||+++.
T Consensus 505 ~~~g~vrlw~l~~ 517 (524)
T 2j04_B 505 NSAGLLTLEYLSL 517 (524)
T ss_dssp CTTSEEEEEECSC
T ss_pred ccCceEEEEEccc
Confidence 9999999999873
No 44
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.8e-40 Score=313.66 Aligned_cols=289 Identities=26% Similarity=0.365 Sum_probs=250.7
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
.....+.+|...|++++| |++.+|++|+.||.|++|++.++.. .... ..+...|.+++|+|+
T Consensus 9 ~~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~-------------~~~~----~~~~~~v~~~~~~~~ 70 (313)
T 3odt_A 9 QLSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWL-------------GTVV----YTGQGFLNSVCYDSE 70 (313)
T ss_dssp EEEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEE-------------EEEE----EECSSCEEEEEEETT
T ss_pred HHHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEE-------------EEEe----ecCCccEEEEEECCC
Confidence 345789999999999999 9999999999999999999865421 1111 234678999999999
Q ss_pred CCEEEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 225 GTLLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+++|++|+.||.|++|++.. .....+.+|...|.++.| ++++|++++.|+.|++|| .+.....+..|..++.
T Consensus 71 ~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~ 146 (313)
T 3odt_A 71 KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVW 146 (313)
T ss_dssp TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEE
T ss_pred CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCcee
Confidence 99999999999999999753 345677899999999999 577999999999999999 6667778888999998
Q ss_pred EEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 301 DVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 301 ~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
.+.+. +...+++++.|+.|++|+ ...++..+.. |...+.+++|+|++. +++++.||.|++||+++++.+..+..
T Consensus 147 ~~~~~~~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~ 223 (313)
T 3odt_A 147 DAKVVSFSENKFLTASADKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEG 223 (313)
T ss_dssp EEEEEETTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred EEEEccCCCCEEEEEECCCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECCchhhhhhhhc
Confidence 88874 577889999999999999 4556667777 889999999999998 88999999999999999999999999
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
|...|.+++|+|++. |++++.||.|++||+.+++++..+..|..+|++++|+|+++ +++++.||.|++|
T Consensus 224 ~~~~i~~~~~~~~~~----------l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw 292 (313)
T 3odt_A 224 HESFVYCIKLLPNGD----------IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIF 292 (313)
T ss_dssp CSSCEEEEEECTTSC----------EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEE
T ss_pred CCceEEEEEEecCCC----------EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEE
Confidence 999999999999873 78999999999999999999999999999999999999998 5679999999999
Q ss_pred eCCCCeeEEEEe
Q 010759 458 SLKEGKIVKTYT 469 (502)
Q Consensus 458 ~~~~~~~~~~~~ 469 (502)
++.+++.+....
T Consensus 293 ~~~~~~~~~~~~ 304 (313)
T 3odt_A 293 SQEKSRWASEDE 304 (313)
T ss_dssp ESCGGGCCC---
T ss_pred eCCCCceeehhh
Confidence 999887665543
No 45
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.6e-40 Score=314.67 Aligned_cols=254 Identities=25% Similarity=0.408 Sum_probs=209.1
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC--
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 224 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-- 224 (502)
+.++.+|...|++++|+|+|++||||+.|++|+||++.+.... .+. ...+|..+|.+++|+++
T Consensus 2 ~~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~-----------~~~----~l~gH~~~V~~v~~s~~~~ 66 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHK-----------LID----TLTGHEGPVWRVDWAHPKF 66 (297)
T ss_dssp CEECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBC-----------CCE----EECCCSSCEEEEEECCGGG
T ss_pred ceeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcE-----------EEE----EEccccCCeEEEEecCCCc
Confidence 3568899999999999999999999999999999998643210 011 12356789999999874
Q ss_pred CCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 225 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+++|++|+.|++|+||+.... ....+.+|...|.+++|+|+ +.+|++|+.|++|++||+++....
T Consensus 67 g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~---------- 136 (297)
T 2pm7_B 67 GTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT---------- 136 (297)
T ss_dssp CSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB----------
T ss_pred CCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce----------
Confidence 899999999999999998653 44567889999999999997 889999999999999998764210
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-------------CCEEEEEeCCCcEEEEeC
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-------------GSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-------------~~~l~sgs~dg~i~iwd~ 366 (502)
....+.+|...|.+++|+|+ +++|++|+.|++|+|||+
T Consensus 137 -----------------------------~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~ 187 (297)
T 2pm7_B 137 -----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (297)
T ss_dssp -----------------------------CCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEE
T ss_pred -----------------------------eeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEE
Confidence 01234577888888888886 579999999999999999
Q ss_pred CCCc----eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---EEEEe--eCCCCCEEEEE
Q 010759 367 KQDK----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---LLYSL--NGHREPVYSLA 437 (502)
Q Consensus 367 ~~~~----~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---~~~~~--~~h~~~v~~l~ 437 (502)
+++. ....+.+|...|.+++|+|++. ...+|++|+.|++|+|||++... ....+ .+|...|++++
T Consensus 188 ~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~------~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~ 261 (297)
T 2pm7_B 188 NSDAQTYVLESTLEGHSDWVRDVAWSPTVL------LRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRAS 261 (297)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCS------SSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEE
T ss_pred cCCCceEEEEEEecCCCCceEEEEECCCCC------CceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEE
Confidence 8765 5667889999999999999851 01379999999999999987642 22233 56888999999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCC
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
|+|+|++||+|+.||+|+||+..
T Consensus 262 ~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 262 WSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp ECSSSCCEEEEETTSCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999999999999999999976
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.2e-39 Score=310.43 Aligned_cols=282 Identities=25% Similarity=0.419 Sum_probs=245.4
Q ss_pred cccCCCCeEEEEECCC-CCEEEEEECCCcEEEEECCCc------eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEE
Q 010759 209 TNEKSKDVTTLDWNGE-GTLLATGSYDGQARIWSTNGD------LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 281 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~-~~~l~sg~~dg~i~iw~~~~~------~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iw 281 (502)
..+|.+.|++++|+|+ +++|+||+.|++|+||++... ....+.+|...|.+++|+|++++|++|+.|+.|++|
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~ 113 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLW 113 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEE
Confidence 4567899999999997 689999999999999997532 345678999999999999999999999999999999
Q ss_pred eccCcceeEEeeecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcc-eeeecCCCcceeEEEEcCCC--CEEEEEeC
Q 010759 282 DVKTEEWKQQFEFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTG--SLLASCSD 357 (502)
Q Consensus 282 d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~--~~l~sgs~ 357 (502)
+............+...+....+. ....+++++.|+.+++|+...... ...+.+|...+.+++|++++ .++++++.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~ 193 (340)
T 4aow_A 114 DLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW 193 (340)
T ss_dssp ETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEET
T ss_pred eecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcC
Confidence 999888777777777776666654 456788999999999999876543 34566899999999998875 57899999
Q ss_pred CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEE
Q 010759 358 DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA 437 (502)
Q Consensus 358 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 437 (502)
|+.|++||+.+++.+..+.+|...|++++|+|++. +|++|+.||.|++||+++.+.+..+.++ ..|++++
T Consensus 194 d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~---------~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 194 DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS---------LCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS---------EEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC---------EEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 99999999999999999999999999999999986 7999999999999999999999988855 6899999
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec----------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG----------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~----------~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+|++.++ +++.|+.|++|+++++..+..+.. ...|++++|+|+|++||+|+.||+|+|||++
T Consensus 264 ~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~ 336 (340)
T 4aow_A 264 FSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVT 336 (340)
T ss_dssp ECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEE
T ss_pred cCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCC
Confidence 99987655 556799999999999887766532 3469999999999999999999999999986
No 47
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=6.6e-41 Score=336.42 Aligned_cols=287 Identities=18% Similarity=0.286 Sum_probs=232.2
Q ss_pred eeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CC
Q 010759 148 TILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~ 225 (502)
..+.+|...|+||+||| ++++||+|+.||+|+|||+.++... .. ....+|...|++|+|+| ++
T Consensus 113 ~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~-----------~~----~~~~gH~~~V~~l~f~p~~~ 177 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP-----------TF----IKGIGAGGSITGLKFNPLNT 177 (435)
T ss_dssp CEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC-----------EE----ECCCSSSCCCCEEEECSSCT
T ss_pred ccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce-----------eE----EEccCCCCCEEEEEEeCCCC
Confidence 35668999999999999 4679999999999999998765321 01 11235678999999998 78
Q ss_pred CEEEEEECCCcEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEE
Q 010759 226 TLLATGSYDGQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDV 302 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~ 302 (502)
.+|++|+.||+|+|||+.+.....+.. +...+.+++|+|++.+|++|+.||+|++||++...
T Consensus 178 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~~--------------- 242 (435)
T 4e54_B 178 NQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDGKE--------------- 242 (435)
T ss_dssp TEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSSCB---------------
T ss_pred CEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCcce---------------
Confidence 999999999999999998765544433 34467899999999999999999999999985421
Q ss_pred ecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeee---cccC
Q 010759 303 DWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHD---LREH 378 (502)
Q Consensus 303 ~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~---~~~~ 378 (502)
+..+.+|...|.+++|+|++. +|++|+.|+.|+|||+++.+.... ...|
T Consensus 243 ---------------------------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h 295 (435)
T 4e54_B 243 ---------------------------LWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPH 295 (435)
T ss_dssp ---------------------------CCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBC
T ss_pred ---------------------------eEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeec
Confidence 234668999999999999986 788999999999999987665433 3568
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC------CEEEEEECCCCCEEEEEe---
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE------PVYSLAFSPTGEYLASGS--- 449 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spdg~~lasgs--- 449 (502)
...|++++|+|++. +|++|+.||.|+|||+.++.....+..|.. .+..+.|+|++.++++++
T Consensus 296 ~~~v~~~~~spdg~---------~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 366 (435)
T 4e54_B 296 RHPVNAACFSPDGA---------RLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPD 366 (435)
T ss_dssp SSCEEECCBCTTSS---------EEEEEESSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCC
T ss_pred cccccceeECCCCC---------eeEEEcCCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCC
Confidence 89999999999986 799999999999999999988877766542 234567888877777664
Q ss_pred ---------CCCcEEEEeCCCCeeEEEEec--CCCEEEE-EECCCCCEEEEEECCCeEEEEEee
Q 010759 450 ---------LDKSMHIWSLKEGKIVKTYTG--NGGIFEV-CWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 450 ---------~Dg~i~iw~~~~~~~~~~~~~--~~~i~~~-~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.++.|++|+..+|+++..+.. ...|.++ +|+|+|++||+|+ |++|+|||++
T Consensus 367 ~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~i~iW~~~ 429 (435)
T 4e54_B 367 PNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYHILIWSQQ 429 (435)
T ss_dssp TTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSEEEECCCC
T ss_pred CCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCcEEEEECC
Confidence 235799999999998887643 3457776 6999999999886 7899999975
No 48
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1e-39 Score=323.26 Aligned_cols=281 Identities=18% Similarity=0.306 Sum_probs=253.4
Q ss_pred cccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-------eeEeecCCCCCEEEEEecCC----C---CEEEEecC
Q 010759 209 TNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-------LKCTLSKHKGPIFSLKWNKK----G---DYLLTGSC 274 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-------~~~~~~~h~~~V~~l~~~~~----~---~~l~sgs~ 274 (502)
...|...|++++|+| .+|++|+.||.|++|+.... ....+.+|..+|++++|+|+ + .+|++++.
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~ 89 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSF 89 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEET
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcC
Confidence 345788999999998 89999999999999998654 36778899999999999999 9 99999999
Q ss_pred CCeEEEEeccCcce-----eEEeeec-----ccCeEEEecC----C-Cce-EEEEcCCCeEEEEEcCC------Cccee-
Q 010759 275 DKTAIVWDVKTEEW-----KQQFEFH-----SGPTLDVDWR----N-NVS-FATSSTDNMIYVCKIGE------NRPIK- 331 (502)
Q Consensus 275 D~~v~iwd~~~~~~-----~~~~~~~-----~~~~~~~~~~----~-~~~-~~~~~~d~~i~~~~~~~------~~~~~- 331 (502)
|+.|++||+.++.. ...+..| ...+.++.|. . ... +++++.|+.|++|++.. ...+.
T Consensus 90 dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~ 169 (397)
T 1sq9_A 90 SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNW 169 (397)
T ss_dssp TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCC
T ss_pred CCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeec
Confidence 99999999998886 7777777 5889999987 4 445 78889999999999988 66665
Q ss_pred ----ee-------cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc---C---CCcEEEEEEccCCCCC
Q 010759 332 ----TF-------AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---H---SKEIYTIRWSPTGSGT 394 (502)
Q Consensus 332 ----~~-------~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---~---~~~i~~~~~sp~g~~~ 394 (502)
.+ ..|...|.+++|+|++ +|++|+.||.|++||+++++.+..+.. | ...+.+++|+|++.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-- 246 (397)
T 1sq9_A 170 SPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-- 246 (397)
T ss_dssp CCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTT--
T ss_pred cCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCC--
Confidence 66 4488899999999999 999999999999999999999998888 8 99999999999886
Q ss_pred CCCCCcEEEEEEeCC---CeEEEEeCCCCeEEEEeeC-------------CCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 395 NNPNQQLILASASFD---STVKLWDVELGKLLYSLNG-------------HREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 395 ~~~~~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~-------------h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
+|++++.| |.|++||+++++.+..+.+ |...|++++|+|++++|++|+.||.|++|+
T Consensus 247 -------~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd 319 (397)
T 1sq9_A 247 -------LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWD 319 (397)
T ss_dssp -------EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEE
T ss_pred -------EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 78899999 9999999999999999998 999999999999999999999999999999
Q ss_pred CCCCeeEEEEe------c----------------CCCEEEEEECCCC----------CEEEEEECCCeEEEEEee
Q 010759 459 LKEGKIVKTYT------G----------------NGGIFEVCWNKEG----------DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 459 ~~~~~~~~~~~------~----------------~~~i~~~~ws~~g----------~~la~~~~~~~v~v~~~~ 501 (502)
+.+++.+..+. + ...|.+++|+|+| ++|++|+.||.|+||+++
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~iw~~~ 394 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRWFREA 394 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEEEEEE
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCCcEEEEEcC
Confidence 99999999888 4 4679999999999 799999999999999986
No 49
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=2.9e-40 Score=321.85 Aligned_cols=293 Identities=19% Similarity=0.335 Sum_probs=241.7
Q ss_pred eeeccccccceeEEEECCCCCE-EEEEeC---CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 147 VTILEGHTSEVCACAWSPAGSL-LASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~-l~sgs~---D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
..++++|...|++++|+|++.. +++|+. |+.|+||++.++... .... ..|...|.+++|+
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~-----------~~~~-----~~~~~~v~~~~~~ 74 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLK-----------LLRE-----IEKAKPIKCGTFG 74 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEE-----------EEEE-----EEESSCEEEEECT
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCccc-----------ceee-----ecccCcEEEEEEc
Confidence 3567889999999999999864 556665 999999999765311 0111 1346789999999
Q ss_pred CC---CCEEEEEECCCcEEEEECCCc--eeEeecCCCCCEEEEE------ecCCCCEEEEecCCCeEEEEeccCcc-eeE
Q 010759 223 GE---GTLLATGSYDGQARIWSTNGD--LKCTLSKHKGPIFSLK------WNKKGDYLLTGSCDKTAIVWDVKTEE-WKQ 290 (502)
Q Consensus 223 ~~---~~~l~sg~~dg~i~iw~~~~~--~~~~~~~h~~~V~~l~------~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~ 290 (502)
|+ +.+|++|+.||.|++|+.... ....+.+|...|.++. |+|++++|++|+.|++|++||+.++. ...
T Consensus 75 ~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~ 154 (357)
T 3i2n_A 75 ATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVA 154 (357)
T ss_dssp TCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSE
T ss_pred CCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcce
Confidence 98 799999999999999998643 5678889999999995 57899999999999999999999886 666
Q ss_pred Eeeeccc----CeEEEe----c-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC---CCCEEEEEeCC
Q 010759 291 QFEFHSG----PTLDVD----W-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP---TGSLLASCSDD 358 (502)
Q Consensus 291 ~~~~~~~----~~~~~~----~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p---~~~~l~sgs~d 358 (502)
.+..+.+ .+.++. | .+...+++++.|+.|++|++.....+ ....|...|.+++|+| ++.+|++|+.|
T Consensus 155 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 233 (357)
T 3i2n_A 155 NMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALR-WETNIKNGVCSLEFDRKDISMNKLVATSLE 233 (357)
T ss_dssp EECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEE-EEEECSSCEEEEEESCSSSSCCEEEEEEST
T ss_pred eccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCcee-eecCCCCceEEEEcCCCCCCCCEEEEECCC
Confidence 6665554 666776 4 35567888999999999999988764 3467889999999999 99999999999
Q ss_pred CcEEEEeCCCCceeeecc-----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC-------------
Q 010759 359 VTAKIWNMKQDKYVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------------- 420 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~-----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------------- 420 (502)
|.|++||++++..+..+. .|...|++++|+|++. .+|++|+.||.|++||++.+
T Consensus 234 g~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~ 305 (357)
T 3i2n_A 234 GKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNR--------ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEM 305 (357)
T ss_dssp TEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEE--------EEEEEEETTSEEEEEEEECCSCC--CCTTSCCC
T ss_pred CeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCC--------cEEEEEeCCCcEEEeecCCCcccccccCCCCcc
Confidence 999999998877655554 8999999999999874 37899999999999998753
Q ss_pred ------eEEEEeeCCCCCEEEEEECCCCCEEE-EEeCCCcEEEEeCCCCee
Q 010759 421 ------KLLYSLNGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 421 ------~~~~~~~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~ 464 (502)
+.+..+.+|..+|++++|+|+|++|+ +|+.||.|+||++.+..+
T Consensus 306 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 306 GVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp CCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred ccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 46778899999999999999999998 899999999999987653
No 50
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.5e-39 Score=314.00 Aligned_cols=244 Identities=23% Similarity=0.489 Sum_probs=220.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
+|...|.+++|+|++++|++|+.||.|++|+.. +.....+..|...|.+++|+|++++|++|+.|+.|++||+.+....
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~ 132 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGN 132 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBS
T ss_pred CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCc
Confidence 467889999999999999999999999999975 4566678899999999999999999999999999999998764310
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
......+.+|.+.|.++.|++++. +++++.|++|++||+.++
T Consensus 133 -------------------------------------~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~ 174 (340)
T 1got_B 133 -------------------------------------VRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETG 174 (340)
T ss_dssp -------------------------------------CEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTT
T ss_pred -------------------------------------ceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCC
Confidence 012345678999999999998875 889999999999999999
Q ss_pred ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe
Q 010759 370 KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 370 ~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs 449 (502)
..+..+.+|...|.+++|+|++. +|++|+.||.|++||++++.++..+.+|...|++++|+|++++|++|+
T Consensus 175 ~~~~~~~~h~~~v~~~~~~~~~~---------~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s 245 (340)
T 1got_B 175 QQTTTFTGHTGDVMSLSLAPDTR---------LFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGS 245 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTSS---------EEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEE
T ss_pred cEEEEEcCCCCceEEEEECCCCC---------EEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEc
Confidence 99999999999999999999886 799999999999999999999999999999999999999999999999
Q ss_pred CCCcEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 450 LDKSMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.||+|++||+++++.+..+... ..|.+++|+|+|++|++|+.|+.|+|||++
T Consensus 246 ~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~ 300 (340)
T 1got_B 246 DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDAL 300 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcc
Confidence 9999999999999888777643 369999999999999999999999999974
No 51
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=319.20 Aligned_cols=342 Identities=17% Similarity=0.228 Sum_probs=243.5
Q ss_pred ceeeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-
Q 010759 146 DVTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG- 223 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~- 223 (502)
....+++|.+.|++++|+| ++++||+|+.||.|++|++.++......... ............|...|.+++|+|
T Consensus 35 ~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~ 110 (408)
T 4a11_B 35 DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCK----AVCSIGRDHPDVHRYSVETVQWYPH 110 (408)
T ss_dssp TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEEC----EEEEECTTCTTCCSSCEEEEEECTT
T ss_pred ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecc----ccccccccccccCCCcEEEEEEccC
Confidence 3467889999999999999 9999999999999999999876543221100 000111122235778999999999
Q ss_pred CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCC---CEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 224 EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKG---DYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~---~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
++.+|++++.||.|++|+...........+...+.++.|+|.+ .++++|+.|+.|++||+++++....+..|..++.
T Consensus 111 ~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~ 190 (408)
T 4a11_B 111 DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEIL 190 (408)
T ss_dssp CTTCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEE
T ss_pred CCcEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEE
Confidence 7889999999999999998866554444588899999999854 4999999999999999999999999999999999
Q ss_pred EEecCCCc--eEEEEcCCCeEEEEEcCCCc-ceeee---------------cCCCcceeEEEEcCCCCEEEEEeCCCcEE
Q 010759 301 DVDWRNNV--SFATSSTDNMIYVCKIGENR-PIKTF---------------AGHQGEVNCVKWDPTGSLLASCSDDVTAK 362 (502)
Q Consensus 301 ~~~~~~~~--~~~~~~~d~~i~~~~~~~~~-~~~~~---------------~~h~~~v~~v~~~p~~~~l~sgs~dg~i~ 362 (502)
++.|.++. .+++++.|+.|++|++.... ++..+ .+|...|.+++|+|++++|++++.||.|+
T Consensus 191 ~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 270 (408)
T 4a11_B 191 AVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMR 270 (408)
T ss_dssp EEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEE
Confidence 99997654 48899999999999997654 33333 57889999999999999999999999999
Q ss_pred EEeCCCCceeeecccCCC----cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE
Q 010759 363 IWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~----~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 438 (502)
+||+.+++....+..+.. ....+.+..... ..++.++.++.|++||+.+++++..+.+|..+|++++|
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~ 342 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCS--------SEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVF 342 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSS--------SCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCC--------ceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEE
Confidence 999998876544332211 001111111111 13556678999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC-CCEEEEEECCCeEEEEEee
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE-GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~-g~~la~~~~~~~v~v~~~~ 501 (502)
+|++++|++|+.||.|++|++.+++.+........ ...++|. ....+.+..++.+.+|+..
T Consensus 343 s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 343 QSNFQELYSGSRDCNILAWVPSLYEPVPDDDETTT--KSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp ETTTTEEEEEETTSCEEEEEECC-----------------------------------------
T ss_pred cCCCCEEEEECCCCeEEEEeCCCCCccCCCCceEe--ccccccccceeecccCccCceeecCCc
Confidence 99999999999999999999999887665433221 2334443 3355566778899999764
No 52
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-39 Score=310.42 Aligned_cols=249 Identities=19% Similarity=0.333 Sum_probs=225.0
Q ss_pred ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEE
Q 010759 245 DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCK 323 (502)
Q Consensus 245 ~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~ 323 (502)
....++.+|.+.|++++|+|++++|++|+.||+|++||+.++.....+..|..++.++.|.. ...+++++.|+.|++|+
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd 83 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFN 83 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEE
T ss_pred eeEEeecCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEE
Confidence 34567889999999999999999999999999999999999999999999999999998854 55788999999999999
Q ss_pred cCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-ceeeecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 324 IGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD-KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 324 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~-~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
+.+++.+..+.+|.+.|.+++|+|++++|++|+.|++|++||++++ .....+.+|...|.+++|+|.+. .+
T Consensus 84 ~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~--------~~ 155 (304)
T 2ynn_A 84 YNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDP--------ST 155 (304)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCT--------TE
T ss_pred CCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCC--------CE
Confidence 9999999999999999999999999999999999999999999877 45567889999999999999532 27
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEee-CCCCCEEEEEECC--CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEE
Q 010759 403 LASASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFSP--TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVC 478 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~sp--dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ 478 (502)
|++|+.|++|++||++.+.....+. +|...|..+.|+| ++++|++|+.|++|++||+++++.+.++.++ ..|..++
T Consensus 156 l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~ 235 (304)
T 2ynn_A 156 FASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAV 235 (304)
T ss_dssp EEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEE
Confidence 9999999999999998877666554 5668899999987 6789999999999999999999999999875 5699999
Q ss_pred ECCCCCEEEEEECCCeEEEEEee
Q 010759 479 WNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 479 ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+|++.+||+|+.|++|+|||++
T Consensus 236 ~~p~~~~l~s~s~Dg~i~iWd~~ 258 (304)
T 2ynn_A 236 FHPTLPIIISGSEDGTLKIWNSS 258 (304)
T ss_dssp ECSSSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEcCCCeEEEEECC
Confidence 99999999999999999999974
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.5e-38 Score=306.97 Aligned_cols=285 Identities=18% Similarity=0.338 Sum_probs=249.4
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
..+|...|++++|+|++++|++++ ||.|++|++.++..... + ... ....+...|.+++|+|++++|+
T Consensus 47 ~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~-----~-----~~~--~~~~~~~~v~~~~~~~~~~~l~ 113 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSP-----V-----SQL--DCLNRDNYIRSCKLLPDGCTLI 113 (337)
T ss_dssp EECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSC-----S-----EEE--ECSCTTSBEEEEEECTTSSEEE
T ss_pred eccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceee-----e-----ecc--cccCCCCcEEEEEEcCCCCEEE
Confidence 447999999999999999999999 99999999976542211 0 001 1123567899999999999999
Q ss_pred EEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 230 TGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+++.||.|++|+.... ....+..|...|++++|+|++++|++++.|+.|++||+++++....+..|...+.++.|.+
T Consensus 114 ~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~ 193 (337)
T 1gxr_A 114 VGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISN 193 (337)
T ss_dssp EEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECT
T ss_pred EEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECC
Confidence 9999999999998754 3456788999999999999999999999999999999999999989988999999999964
Q ss_pred -CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 307 -NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 307 -~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
...+++++.|+.|++|++...+++..+. |...+.+++|+|++++|++++.|+.|++||+.++... .+..|...+.++
T Consensus 194 ~~~~l~~~~~dg~i~~~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~ 271 (337)
T 1gxr_A 194 DGTKLWTGGLDNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSL 271 (337)
T ss_dssp TSSEEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEE
T ss_pred CCCEEEEEecCCcEEEEECCCCceEeeec-CCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEE
Confidence 4578888999999999999888777664 7788999999999999999999999999999887654 567889999999
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
+|+|++. +|++++.||.|++||+.+++.+.... |...|++++|+|++++|++++.||.|++|++
T Consensus 272 ~~~~~~~---------~l~~~~~dg~i~~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 272 KFAYCGK---------WFVSTGKDNLLNAWRTPYGASIFQSK-ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECTTSS---------EEEEEETTSEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSCEEEEEE
T ss_pred EECCCCC---------EEEEecCCCcEEEEECCCCeEEEEec-CCCcEEEEEECCCCCEEEEecCCCeEEEEEE
Confidence 9999886 78999999999999999998886554 7889999999999999999999999999986
No 54
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=329.93 Aligned_cols=298 Identities=14% Similarity=0.277 Sum_probs=233.6
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCC------------CCeEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKS------------KDVTTL 219 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~V~~l 219 (502)
.|.+.|++++|+|+|++||+|+.||.|+||++.++.......... ......+. .|. ..|.++
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~~~----~h~~~~~~~~~~~~~~~V~~l 99 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGE--YNVYSTFQ----SHEPEFDYLKSLEIEEKINKI 99 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCC--EEEEEEEE----CCCCEEEGGGTEEECCCCCEE
T ss_pred cccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccc--eeEecccc----cccccccccccccccCceEEE
Confidence 378899999999999999999999999999998764321111111 11122222 234 779999
Q ss_pred EECCCC--CEEEEEECCCcEEEEECCCcee-----------------------------------------EeecCCCCC
Q 010759 220 DWNGEG--TLLATGSYDGQARIWSTNGDLK-----------------------------------------CTLSKHKGP 256 (502)
Q Consensus 220 ~~s~~~--~~l~sg~~dg~i~iw~~~~~~~-----------------------------------------~~~~~h~~~ 256 (502)
+|+|++ .+|++++.|+.|++|+...... ....+|...
T Consensus 100 ~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 100 RWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp EECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred EEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 999998 8999999999999999753211 113679999
Q ss_pred EEEEEecCCCCEEEEecCCCeEEEEeccCcc-eeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC
Q 010759 257 IFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 335 (502)
|++++|+|++++|++| .|++|++||+++.. .... .+.. ...+.+
T Consensus 180 v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~------------------------------~~~~----~~~~~~ 224 (447)
T 3dw8_B 180 INSISINSDYETYLSA-DDLRINLWHLEITDRSFNI------------------------------VDIK----PANMEE 224 (447)
T ss_dssp CCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEE------------------------------EECC----CSSGGG
T ss_pred eEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeee------------------------------eecc----cccccc
Confidence 9999999999999999 79999999997432 1111 1111 124568
Q ss_pred CCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCCCce----eeecccCCC------------cEEEEEEccCCCCCCCCC
Q 010759 336 HQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQDKY----VHDLREHSK------------EIYTIRWSPTGSGTNNPN 398 (502)
Q Consensus 336 h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~~~~----~~~~~~~~~------------~i~~~~~sp~g~~~~~~~ 398 (502)
|...|.+++|+|++ .+|++|+.||.|++||++++.. +..+..|.. .|.+++|+|++.
T Consensus 225 ~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~------ 298 (447)
T 3dw8_B 225 LTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR------ 298 (447)
T ss_dssp CCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS------
T ss_pred cCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC------
Confidence 99999999999998 9999999999999999998886 677777765 899999999986
Q ss_pred CcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCC---------------EEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 399 QQLILASASFDSTVKLWDVEL-GKLLYSLNGHREP---------------VYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 399 ~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~---------------v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
+|++++. +.|++||+++ ++++..+.+|... +..++|+|++++|++|+.||.|++||+.++
T Consensus 299 ---~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 299 ---YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp ---EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred ---EEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 7888888 9999999997 8888888888642 334999999999999999999999999998
Q ss_pred eeEEEE---------------------------------ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 463 KIVKTY---------------------------------TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 463 ~~~~~~---------------------------------~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+... .....|..++|+|+|++||+++.|+ +++|.-+
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 375 RDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSC-EEEEECC
T ss_pred cceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecce-eeeeccc
Confidence 775421 1123578899999999999998886 7788654
No 55
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-39 Score=324.52 Aligned_cols=247 Identities=27% Similarity=0.468 Sum_probs=232.3
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEc
Q 010759 246 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKI 324 (502)
Q Consensus 246 ~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~ 324 (502)
....+.+|.++|++++|+|++.+|++|+.|++|++||+.+++....+..|...+.++.|.. ...+++++.|+.|++|++
T Consensus 100 ~~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 100 EKYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CSCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred ceEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 3456789999999999999999999999999999999999999999999999999999964 457889999999999999
Q ss_pred CCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 325 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 325 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
....++..+.+|...|.+++|+|++.+|++|+.|++|++||+.++.++..+.+|...|.++.|+|++. +|+
T Consensus 180 ~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~---------~l~ 250 (410)
T 1vyh_C 180 QGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGT---------LIA 250 (410)
T ss_dssp TSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSS---------EEE
T ss_pred CCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCC---------EEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 899
Q ss_pred EEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC--------------------CCEEEEEeCCCcEEEEeCCCCee
Q 010759 405 SASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPT--------------------GEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 405 sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd--------------------g~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
+|+.|++|++||+.++++...+.+|...|++++|+|+ |.+|++|+.|+.|++||+.++..
T Consensus 251 s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~ 330 (410)
T 1vyh_C 251 SCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMC 330 (410)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEE
T ss_pred EEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCce
Confidence 9999999999999999999999999999999999996 67899999999999999999999
Q ss_pred EEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 465 VKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 465 ~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.++.++. .|.+++|+|+|++|++|+.|++|+|||++
T Consensus 331 ~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 331 LMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp EEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCT
T ss_pred EEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 99887654 59999999999999999999999999975
No 56
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3e-41 Score=332.05 Aligned_cols=288 Identities=16% Similarity=0.188 Sum_probs=227.2
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
.+..|..+|++++|+|++++||+|+.|+.|+||++.++.. ........|...|.+++|+|++++|
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~s~~~~~l 70 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGW---------------KHARTFSDHDKIVTCVDWAPKSNRI 70 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEE---------------EECCCBCCCSSCEEEEEECTTTCCE
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCce---------------EEEEEEecCCceEEEEEEeCCCCEE
Confidence 3455778999999999999999999999999999875410 0112233567889999999999999
Q ss_pred EEEECCCcEEEEECCCce----eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 229 ATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~~----~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
++|+.|+.|++|+..... ...+.+|...|++++|+|++++|++|+.|++|++||++++...
T Consensus 71 ~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~--------------- 135 (377)
T 3dwl_C 71 VTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDW--------------- 135 (377)
T ss_dssp EEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----C---------------
T ss_pred EEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccc---------------
Confidence 999999999999987543 5677889999999999999999999999999999998765310
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC----------------
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK---------------- 367 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~---------------- 367 (502)
..+..+.+ |...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 136 -----------------------~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 192 (377)
T 3dwl_C 136 -----------------------WVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSR 192 (377)
T ss_dssp -----------------------CCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSC
T ss_pred -----------------------eeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccc
Confidence 11234455 88999999999999999999999999999985
Q ss_pred --CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE----EEEeeCCCCCEEEEEECCC
Q 010759 368 --QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL----LYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 368 --~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spd 441 (502)
.+.++..+ .|...|.+++|+|++. +|++|+.||.|++||+.+++. +..+.+|..+|++++|+|+
T Consensus 193 ~~~~~~~~~~-~~~~~v~~~~~sp~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 262 (377)
T 3dwl_C 193 LPFNTVCAEY-PSGGWVHAVGFSPSGN---------ALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANE 262 (377)
T ss_dssp CCEEEEEECC-CCSSSEEEEEECTTSS---------CEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEET
T ss_pred cchhhhhhcc-cCCceEEEEEECCCCC---------EEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCC
Confidence 34566666 8999999999999986 789999999999999998876 7788999999999999999
Q ss_pred CCEEEEEeCCCcEEEEeCCCCe--eE----------------------------------EEEe----------------
Q 010759 442 GEYLASGSLDKSMHIWSLKEGK--IV----------------------------------KTYT---------------- 469 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~~~~~~--~~----------------------------------~~~~---------------- 469 (502)
|++|++|+.++.+ +|+...+. .. ..+.
T Consensus 263 ~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 341 (377)
T 3dwl_C 263 SAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPT 341 (377)
T ss_dssp TEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSS
T ss_pred CCEEEEEcCCcEE-EEEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCc
Confidence 9999999877766 66654211 00 0010
Q ss_pred -cCCCEEEEEECCCC-C---EEEEEECCCeEEEEEe
Q 010759 470 -GNGGIFEVCWNKEG-D---KIAACFANHTVCVLDF 500 (502)
Q Consensus 470 -~~~~i~~~~ws~~g-~---~la~~~~~~~v~v~~~ 500 (502)
+...|.++++.+.. . +|++|+.||.|+|||+
T Consensus 342 ~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 342 VHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp SCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred cccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 33568899976643 3 6999999999999986
No 57
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-39 Score=318.11 Aligned_cols=251 Identities=21% Similarity=0.287 Sum_probs=207.1
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
...+|...|++++|+|++.+ ++++.||+|+|||+.++...... ......|...|++++|+|++++|
T Consensus 89 ~~~~~~~~V~~~~~s~d~~~-l~~s~dg~v~lWd~~~~~~~~~~-------------~~~~~~h~~~V~~v~~spdg~~l 154 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVSEKGI-LVASDSGAVELWEILEKESLLVN-------------KFAKYEHDDIVKTLSVFSDGTQA 154 (357)
T ss_dssp EEEECSSCEEEEEEETTTEE-EEEETTSCEEEC--------CCC-------------CEEECCCSSCEEEEEECSSSSEE
T ss_pred ccCCCCCCEEEEEEcCCCCE-EEEECCCEEEEeeccccceeEEE-------------eeccCCCCCCEEEEEECCCCCEE
Confidence 44579999999999999864 56788999999999776432110 11122467889999999999999
Q ss_pred EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 229 ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
++|+.|+.|++||... .....+.+|...|++++|+|++. +|++++.|++|++||+++++....
T Consensus 155 ~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~--------------- 219 (357)
T 4g56_B 155 VSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATR--------------- 219 (357)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCB---------------
T ss_pred EEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeee---------------
Confidence 9999999999999864 55668899999999999999875 789999999999999987653221
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+..|...+.+++|+|+ +.+|++|+.|+.|++||+++++.+..+..|...|+++
T Consensus 220 ------------------------~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l 275 (357)
T 4g56_B 220 ------------------------IDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGL 275 (357)
T ss_dssp ------------------------CCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEE
T ss_pred ------------------------eeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEE
Confidence 123346677999999998 4689999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEeCCC
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~ 461 (502)
+|+|++. .+|++|+.||+|+|||+++++++..+ +|...|++|+|+| ++.+|||||.||+|++|++..
T Consensus 276 ~~sp~~~--------~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~ 343 (357)
T 4g56_B 276 AYSYHSS--------PFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPS 343 (357)
T ss_dssp EECSSSS--------CCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC-
T ss_pred EEcCCCC--------CEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCC
Confidence 9999874 27899999999999999999887655 7999999999999 799999999999999999865
No 58
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.8e-39 Score=313.36 Aligned_cols=257 Identities=29% Similarity=0.510 Sum_probs=207.6
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
...+|...|++++|+|+|++||+|+.|++|+||++..+. ...+.. ..+|...|.+++|+|++++|
T Consensus 56 ~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~-----------~~~~~~----~~~h~~~v~~v~~sp~~~~l 120 (345)
T 3fm0_A 56 LSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDD-----------FECVTT----LEGHENEVKSVAWAPSGNLL 120 (345)
T ss_dssp ECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC------------EEEEEE----ECCCSSCEEEEEECTTSSEE
T ss_pred eccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCC-----------eEEEEE----ccCCCCCceEEEEeCCCCEE
Confidence 347899999999999999999999999999999986532 111222 23467889999999999999
Q ss_pred EEEECCCcEEEEECCCc----eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 229 ATGSYDGQARIWSTNGD----LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~----~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
++|+.|+.|++|++... ....+.+|...|.+++|+|++.+|++|+.|++|++||+.++.+.
T Consensus 121 ~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~--------------- 185 (345)
T 3fm0_A 121 ATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWV--------------- 185 (345)
T ss_dssp EEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEE---------------
T ss_pred EEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEE---------------
Confidence 99999999999998642 34567899999999999999999999999999999998765321
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC---------------
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD--------------- 369 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~--------------- 369 (502)
++..+.+|...|.+++|+|+|++|++|+.|++|+||+....
T Consensus 186 ------------------------~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 186 ------------------------CCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp ------------------------EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred ------------------------EEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 12356789999999999999999999999999999996321
Q ss_pred ceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---------EEEEeeCCCCCEEEEEEC
Q 010759 370 KYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---------LLYSLNGHREPVYSLAFS 439 (502)
Q Consensus 370 ~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~s 439 (502)
+++..+.. |...|++++|+|++. +|++++.|+.|++|+...+. ......+|...|++|+|+
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~---------~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~ 312 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTG---------ALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWN 312 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTC---------CEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEEC
T ss_pred ceeEEecCCCCCcEEEEEEecCCC---------EEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEe
Confidence 22333443 788999999999886 68999999999999986542 122346899999999999
Q ss_pred CCC-CEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 440 PTG-EYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 440 pdg-~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
|++ .+||+||.||+|++|++.+++.+..+
T Consensus 313 p~~~~~laS~s~Dg~v~~W~~~~~~~~~~~ 342 (345)
T 3fm0_A 313 PKEPGLLASCSDDGEVAFWKYQRPEGLHHH 342 (345)
T ss_dssp SSSTTEEEEEETTSCEEEEEECC-------
T ss_pred CCCceEEEEcCCCCcEEEEEecCCCCcccc
Confidence 998 59999999999999999987765443
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.2e-39 Score=307.12 Aligned_cols=252 Identities=24% Similarity=0.436 Sum_probs=207.8
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC---ceeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccC
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~ 285 (502)
+|...|.+++|+|+|++|++|+.|++|+||+..+ ....++.+|.++|++++|+|. +++|++|+.|++|++||+.+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~ 86 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEEN 86 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSS
T ss_pred CCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCC
Confidence 4678899999999999999999999999999863 456788999999999999863 88999999999999999876
Q ss_pred cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEE
Q 010759 286 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKI 363 (502)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~i 363 (502)
+.+. .+..+.+|...|.+++|+|+ +.+|++|+.|++|++
T Consensus 87 ~~~~---------------------------------------~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~ 127 (297)
T 2pm7_B 87 GRWS---------------------------------------QIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSV 127 (297)
T ss_dssp SCBC---------------------------------------CCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEE
T ss_pred CceE---------------------------------------EEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEE
Confidence 5321 12345678899999999998 899999999999999
Q ss_pred EeCCCCce--eeecccCCCcEEEEEEccCCCCCC----CCCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCCCCCE
Q 010759 364 WNMKQDKY--VHDLREHSKEIYTIRWSPTGSGTN----NPNQQLILASASFDSTVKLWDVELGK----LLYSLNGHREPV 433 (502)
Q Consensus 364 wd~~~~~~--~~~~~~~~~~i~~~~~sp~g~~~~----~~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h~~~v 433 (502)
||+++... ...+..|...|.+++|+|++.... .+....+|++|+.|++|++||+++++ ....+.+|...|
T Consensus 128 wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V 207 (297)
T 2pm7_B 128 VEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 207 (297)
T ss_dssp EEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred EEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCce
Confidence 99987632 355678999999999999742100 00012378999999999999998765 667889999999
Q ss_pred EEEEECCCC---CEEEEEeCCCcEEEEeCCCCe--e-EEEE---ecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 434 YSLAFSPTG---EYLASGSLDKSMHIWSLKEGK--I-VKTY---TGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 434 ~~l~~spdg---~~lasgs~Dg~i~iw~~~~~~--~-~~~~---~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++|+|+|++ .+||+||.|++|+||++.++. . ...+ .....|++++|+|+|++||+++.|++|+||+..
T Consensus 208 ~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 208 RDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 999999995 899999999999999997643 1 1222 124569999999999999999999999999875
No 60
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-38 Score=306.33 Aligned_cols=248 Identities=26% Similarity=0.398 Sum_probs=217.2
Q ss_pred ccccCCCCeEEEEECCCC-CEEEEEECCCcEEEEECCC------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEE
Q 010759 208 RTNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 280 (502)
Q Consensus 208 ~~~~~~~~V~~l~~s~~~-~~l~sg~~dg~i~iw~~~~------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~i 280 (502)
...+|.+.|.+++|+|++ ++|++|+.|++|++|+..+ .....+.+|...|.+++|+|++.+|++|+.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 345678999999999965 8999999999999999752 234578899999999999999999999999999999
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 360 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~ 360 (502)
||+.+++.. ..+.+|...|.+++|+|++.+|++|+.|++
T Consensus 92 wd~~~~~~~-----------------------------------------~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 92 WDVATGETY-----------------------------------------QRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EETTTTEEE-----------------------------------------EEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred EECCCCCee-----------------------------------------EEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 999876532 345678899999999999999999999999
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
|++||++ +..+..+.+|...+.+++|.|..... ....+|++|+.|+.|++||+.+++....+.+|..+|++++|+|
T Consensus 131 i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~---~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp 206 (319)
T 3frx_A 131 IKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKAD---DDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASP 206 (319)
T ss_dssp EEEEETT-SCEEEEECCCSSCEEEEEECCC---------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECT
T ss_pred EEEEECC-CCeEEEEeccCCcEEEEEEccCCCCC---CCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcC
Confidence 9999996 45677888999999999999865321 1123789999999999999999999999999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+|++|++|+.||.|+|||+.+++.+.++..+..|.+++|+|+|.+||++..+ .+.||++.
T Consensus 207 ~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~-~i~v~~~~ 266 (319)
T 3frx_A 207 DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATAT-GIKVFSLD 266 (319)
T ss_dssp TSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETT-EEEEEEET
T ss_pred CCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCC-CcEEEEeC
Confidence 9999999999999999999999999999888899999999999999998865 58899864
No 61
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1e-38 Score=316.96 Aligned_cols=288 Identities=20% Similarity=0.373 Sum_probs=240.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+....+|...+.+.++++++..+++++.|+.|++|++.++... .... ..+...|.+++|+|++.
T Consensus 84 ~~~~~~~~~~~~~~~~~~s~~~l~~~~~d~~v~lw~~~~~~~~-------------~~~~---~~~~~~v~~v~~s~~~~ 147 (401)
T 4aez_A 84 VLDAPGIIDDYYLNLLDWSNLNVVAVALERNVYVWNADSGSVS-------------ALAE---TDESTYVASVKWSHDGS 147 (401)
T ss_dssp EEECTTCCCCTTCBCEEECTTSEEEEEETTEEEEEETTTCCEE-------------EEEE---CCTTCCEEEEEECTTSS
T ss_pred eeeCCCCcCCceEEEEeecCCCEEEEECCCeEEEeeCCCCcEe-------------Eeee---cCCCCCEEEEEECCCCC
Confidence 3444578776555444444466889999999999999776421 1111 12567899999999999
Q ss_pred EEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 227 LLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+|++|+.||.|++|+.. +.....+.+|...|.+++|+ +++|++|+.|+.|++||++...
T Consensus 148 ~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~i~d~~~~~------------------ 207 (401)
T 4aez_A 148 FLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHVLSSGSRSGAIHHHDVRIAN------------------ 207 (401)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSS------------------
T ss_pred EEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCEEEEEcCCCCEEEEecccCc------------------
Confidence 99999999999999986 45667888999999999994 5799999999999999987432
Q ss_pred CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 306 NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 306 ~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+..+.+|.+.|.+++|+|++++|++|+.||.|++||++++..+..+..|...|.++
T Consensus 208 ----------------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~ 265 (401)
T 4aez_A 208 ----------------------HQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAV 265 (401)
T ss_dssp ----------------------CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEE
T ss_pred ----------------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEE
Confidence 1234566789999999999999999999999999999999999999999999999999
Q ss_pred EEccCCCCCCCCCCcEEEEEEe--CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEeCCC
Q 010759 386 RWSPTGSGTNNPNQQLILASAS--FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS--LDKSMHIWSLKE 461 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs--~Dg~i~iw~~~~ 461 (502)
+|+|++. .++++|+ .|+.|++||+.+++++..+. |...|++++|+|++++|++++ .||.|++|++.+
T Consensus 266 ~~~p~~~--------~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~ 336 (401)
T 4aez_A 266 AWCPWQS--------NLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSS 336 (401)
T ss_dssp EECTTST--------TEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEET
T ss_pred EECCCCC--------CEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCC
Confidence 9999875 2677765 79999999999999998887 667899999999999999954 899999999998
Q ss_pred CeeEEE--Eec-CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 462 GKIVKT--YTG-NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 462 ~~~~~~--~~~-~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+..... +.+ ...|.+++|+|+|++||+++.||.|+||++.
T Consensus 337 ~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~ 379 (401)
T 4aez_A 337 SGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVY 379 (401)
T ss_dssp TEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECC
T ss_pred ccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECC
Confidence 776554 333 4579999999999999999999999999985
No 62
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.1e-38 Score=300.84 Aligned_cols=274 Identities=23% Similarity=0.323 Sum_probs=244.7
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc--
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-- 286 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~-- 286 (502)
.+|...|.+++| +++.+|++|+.||.|++|+.... ....+..|...|.+++|+|++++|++|+.|+.|++|++...
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~ 93 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSG 93 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTT
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCC
Confidence 456789999999 99999999999999999998654 45677889999999999999999999999999999998654
Q ss_pred -ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEE
Q 010759 287 -EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIW 364 (502)
Q Consensus 287 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iw 364 (502)
+....+..|...+.++.| +...+++++.|+.|++|+ ...++..+.+|...+.+++|+| ++.++++++.||.|++|
T Consensus 94 ~~~~~~~~~~~~~i~~~~~-~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~ 170 (313)
T 3odt_A 94 EDPLYTLIGHQGNVCSLSF-QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLW 170 (313)
T ss_dssp SCC-CEECCCSSCEEEEEE-ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred CCcccchhhcccCEEEEEe-cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEE
Confidence 456677788999999999 566889999999999999 6677788889999999999998 89999999999999999
Q ss_pred eCCCCceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC
Q 010759 365 NMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 365 d~~~~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
| ....+..+.. |...+.+++|+|++ .+++++.||.|++||+++++.+..+.+|..+|++++|+|++
T Consensus 171 d--~~~~~~~~~~~~~~~i~~~~~~~~~----------~~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~- 237 (313)
T 3odt_A 171 Q--NDKVIKTFSGIHNDVVRHLAVVDDG----------HFISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG- 237 (313)
T ss_dssp E--TTEEEEEECSSCSSCEEEEEEEETT----------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-
T ss_pred e--cCceEEEEeccCcccEEEEEEcCCC----------eEEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-
Confidence 9 4555666666 88999999999987 37899999999999999999999999999999999999999
Q ss_pred EEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 444 YLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.|++++.||.|++|++.+++.+..+..+. .|.+++|+|+|+ +++++.|+.|+|||++
T Consensus 238 ~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~ 295 (313)
T 3odt_A 238 DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQE 295 (313)
T ss_dssp CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSC-EEEEETTSCEEEEESC
T ss_pred CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCC-EEEEeCCCcEEEEeCC
Confidence 68999999999999999999998887654 799999999998 6679999999999975
No 63
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=7.2e-40 Score=314.48 Aligned_cols=255 Identities=24% Similarity=0.366 Sum_probs=201.2
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~ 225 (502)
.++.+|.+.|++++|+|+|++||||+.|++|+|||+.++.. ..+..+ .+|...|.+++|++ ++
T Consensus 7 ~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~-----------~~~~~l----~gH~~~V~~v~~~~~~~~ 71 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQ-----------ILIADL----RGHEGPVWQVAWAHPMYG 71 (316)
T ss_dssp -------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEE-----------EEEEEE----ECCSSCEEEEEECCGGGS
T ss_pred eecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCc-----------EEEEEE----cCCCccEEEEEeCCCCCC
Confidence 35679999999999999999999999999999999875421 111222 34678899999986 48
Q ss_pred CEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 226 TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
++|++|+.|++|++|+.... ....+.+|...|.+++|+|+ +.+|++|+.|++|++||++++....
T Consensus 72 ~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~---------- 141 (316)
T 3bg1_A 72 NILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE---------- 141 (316)
T ss_dssp SCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE----------
T ss_pred CEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc----------
Confidence 99999999999999998653 44567899999999999998 7899999999999999987642110
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-----------------CCEEEEEeCCCcEEE
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-----------------GSLLASCSDDVTAKI 363 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-----------------~~~l~sgs~dg~i~i 363 (502)
....+.+|...|.+++|+|+ +++|++|+.|++|++
T Consensus 142 ----------------------------~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~l 193 (316)
T 3bg1_A 142 ----------------------------VKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKL 193 (316)
T ss_dssp ----------------------------ECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCE
T ss_pred ----------------------------eeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEE
Confidence 01234466677777777776 478999999999999
Q ss_pred EeCCCC---ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---e-EEEEeeCCCCCEEEE
Q 010759 364 WNMKQD---KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG---K-LLYSLNGHREPVYSL 436 (502)
Q Consensus 364 wd~~~~---~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~-~~~~~~~h~~~v~~l 436 (502)
||+... ..+..+.+|...|.+++|+|++.. ...+|++|+.||+|+||++... . ....+.+|...|+++
T Consensus 194 Wd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~-----~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v 268 (316)
T 3bg1_A 194 WKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGL-----PTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHV 268 (316)
T ss_dssp EEECTTSCEEEEECCBCCSSCEEEEECCCCSSC-----SCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEE
T ss_pred EEeCCCCccceeeecccCCCceEEEEecCCCCC-----CCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEE
Confidence 999754 466788899999999999998621 0127999999999999998762 1 123456688999999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCC
Q 010759 437 AFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 437 ~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+|+|+|++||+|+.||+|+||+..
T Consensus 269 ~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 269 SWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp EECTTTCCEEEEESSSCEEEEEEC
T ss_pred EEcCCCCEEEEEcCCCeEEEEEEC
Confidence 999999999999999999999975
No 64
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.5e-40 Score=329.84 Aligned_cols=309 Identities=14% Similarity=0.205 Sum_probs=249.6
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCEEEEEECCCcEEE
Q 010759 161 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSYDGQARI 239 (502)
Q Consensus 161 ~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l~sg~~dg~i~i 239 (502)
.|+|++..+++++ .|+... . .+..+ ...|...|++++|+| ++.+|++|+.||.|+|
T Consensus 34 ~f~~~~~~~~~~~------~w~~~g-~-------------~~~~~---~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~v 90 (437)
T 3gre_A 34 EFGPIQEIVRSPN------MGNLRG-K-------------LIATL---MENEPNSITSSAVSPGETPYLITGSDQGVIKI 90 (437)
T ss_dssp GGCCCCCCCCCCC------GGGCCC-C-------------EEEEE---CTTTTSCEEEEEEECSSSCEEEEEETTSEEEE
T ss_pred hcCCccccccccc------cccccc-e-------------EEeee---ccCCCCceEEEEECCCCCCEEEEecCCceEEE
Confidence 3788888888776 376321 1 11122 134678999999999 9999999999999999
Q ss_pred EECCC---c--e--eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc---CcceeEEeeec------------cc
Q 010759 240 WSTNG---D--L--KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK---TEEWKQQFEFH------------SG 297 (502)
Q Consensus 240 w~~~~---~--~--~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~---~~~~~~~~~~~------------~~ 297 (502)
|+... . . ...+ .|..+|++++|+|++++|++|+.|++|++||+. +++....+..+ ..
T Consensus 91 wd~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 169 (437)
T 3gre_A 91 WNLKEIIVGEVYSSSLTY-DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNE 169 (437)
T ss_dssp EEHHHHHTTCCCSCSEEE-ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCC
T ss_pred eECcccccCcccceeeec-cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCccccc
Confidence 99743 1 1 2222 599999999999999999999999999999994 55554443332 22
Q ss_pred CeEEEec---CCCceEEEEcCCCeEEEEEcCCCcceeeecC--CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 298 PTLDVDW---RNNVSFATSSTDNMIYVCKIGENRPIKTFAG--HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 298 ~~~~~~~---~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
.+.++.+ .+...+++++.|+.|++|++...+++..+.+ |.+.|.+++|+|++++|++|+.||.|++||+++++++
T Consensus 170 ~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~ 249 (437)
T 3gre_A 170 YAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLI 249 (437)
T ss_dssp CEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEE
T ss_pred CceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEE
Confidence 3333332 2356788999999999999999999999988 8899999999999999999999999999999999998
Q ss_pred eecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC----------------------
Q 010759 373 HDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH---------------------- 429 (502)
Q Consensus 373 ~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h---------------------- 429 (502)
..+. .|...|.+++|+|... + ...+|++|+.||.|++||+++++++..+.+|
T Consensus 250 ~~~~~~~~~~v~~~~~~~~~s----~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 250 RSWSFGDHAPITHVEVCQFYG----K-NSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEEBCTTCEEEEEEEECTTTC----T-TEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred EEEecCCCCceEEEEeccccC----C-CccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 8876 6778999998887532 1 1247899999999999999999988887654
Q ss_pred ----CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe------------------------------------
Q 010759 430 ----REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT------------------------------------ 469 (502)
Q Consensus 430 ----~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~------------------------------------ 469 (502)
...|++++|+ ++++|++|+.||.|++||+.+++.+..+.
T Consensus 325 ~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (437)
T 3gre_A 325 GIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDS 403 (437)
T ss_dssp CCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC----------
T ss_pred ccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcc
Confidence 4558888998 77999999999999999999988766655
Q ss_pred --cCCCEEEEEECCC--CCEEEEEECCCeEEEEE
Q 010759 470 --GNGGIFEVCWNKE--GDKIAACFANHTVCVLD 499 (502)
Q Consensus 470 --~~~~i~~~~ws~~--g~~la~~~~~~~v~v~~ 499 (502)
+...|++++|+++ +.+|++|+.||.|+||+
T Consensus 404 ~~h~~~I~~i~~~~~~~~~~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 404 LYHHDIINSISTCEVDETPLLVACDNSGLIGIFQ 437 (437)
T ss_dssp ---CCCEEEEEEEESSSSEEEEEEETTSCEEEEC
T ss_pred cccccceeeEeeeccCCceEEEEEcCCceEEEeC
Confidence 3456999999998 77999999999999995
No 65
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.1e-39 Score=308.71 Aligned_cols=255 Identities=27% Similarity=0.505 Sum_probs=199.3
Q ss_pred eec-cc-cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 148 TIL-EG-HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 148 ~~l-~~-H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
..+ .+ |...|++++|+|++++||+|+.|++|+||++....... .....+.. ...|...|.+++|+|++
T Consensus 50 ~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~------~~~~~~~~----~~~h~~~V~~v~~sp~g 119 (330)
T 2hes_X 50 DVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRT------FEMDLLAI----IEGHENEVKGVAWSNDG 119 (330)
T ss_dssp EEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------------CCCEEEEE----EC----CEEEEEECTTS
T ss_pred EEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcc------ccceeEEE----EcCCCCcEEEEEECCCC
Confidence 344 44 99999999999999999999999999999985421100 00011122 23467889999999999
Q ss_pred CEEEEEECCCcEEEEECC-C----ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 226 TLLATGSYDGQARIWSTN-G----DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~----~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
++|++|+.|++|++|++. . .....+.+|...|.+++|+|++.+|++|+.|++|++||+.++..
T Consensus 120 ~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~------------ 187 (330)
T 2hes_X 120 YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDW------------ 187 (330)
T ss_dssp CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEE------------
T ss_pred CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCe------------
Confidence 999999999999999983 2 23457889999999999999999999999999999999765421
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCC--------c
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQD--------K 370 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~--------~ 370 (502)
.++..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||+..+ .
T Consensus 188 ---------------------------~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~ 240 (330)
T 2hes_X 188 ---------------------------ECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWV 240 (330)
T ss_dssp ---------------------------EEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEE
T ss_pred ---------------------------eEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeE
Confidence 123467789999999999999 778999999999999998654 3
Q ss_pred eeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEE-eeCCCC-CEEEEEECC--CCC
Q 010759 371 YVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYS-LNGHRE-PVYSLAFSP--TGE 443 (502)
Q Consensus 371 ~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~-~~~h~~-~v~~l~~sp--dg~ 443 (502)
+...+.. |...|++++|++.+ +|++|+.||.|++||..++. .+.. +.+|.. .|++++|+| +++
T Consensus 241 ~~~~~~~~h~~~v~~v~~s~~~----------~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~~ 310 (330)
T 2hes_X 241 CEAILPDVHKRQVYNVAWGFNG----------LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGKT 310 (330)
T ss_dssp EEEECCSCCSSCEEEEEECTTS----------CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-----C
T ss_pred EeeecccccccceEEEEEcCCC----------EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCce
Confidence 3444544 88899999999765 58999999999999998774 3333 467887 899999999 789
Q ss_pred EEEEEeCCCcEEEEeCCC
Q 010759 444 YLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 444 ~lasgs~Dg~i~iw~~~~ 461 (502)
+||+||.||+|+||++.+
T Consensus 311 ~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 311 ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp CEEEEETTSEEEEEEC--
T ss_pred EEEEecCCCcEEEEEecc
Confidence 999999999999999864
No 66
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.6e-38 Score=342.50 Aligned_cols=324 Identities=20% Similarity=0.267 Sum_probs=272.0
Q ss_pred ceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 146 DVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 146 ~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.+..+.+|..+|++++|+|++++|++|+.||.|++|++.++... ..+ ..|...|++++|+|++
T Consensus 47 ~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~-------------~~~----~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 47 EVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKV-------------VDF----EAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEE-------------EEE----ECCSSCEEEEEECSSS
T ss_pred eEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE-------------EEE----ecCCCCEEEEEEeCCC
Confidence 45678899999999999999999999999999999999876421 111 2356789999999999
Q ss_pred CEEEEEECCCcEEEEECCC--ceeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeecc-cCeEE
Q 010759 226 TLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS-GPTLD 301 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~-~~~~~ 301 (502)
++|++|+.||.|++|+... .....+.+|..+|.+++|+| +++.|++++.||+|++||+.++.....+..+. ..+..
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~ 189 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNY 189 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCE
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEE
Confidence 9999999999999999864 45567889999999999999 88899999999999999998887777666554 67778
Q ss_pred EecC---CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC
Q 010759 302 VDWR---NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH 378 (502)
Q Consensus 302 ~~~~---~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~ 378 (502)
+.|. +...+++++.|+.|++|++....++..+.+|.+.|.+++|+|++++|++|+.||.|++||+.+++.+..+..+
T Consensus 190 ~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 190 VDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp EEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred EEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 8875 4567889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC----------eEEE------------------------
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG----------KLLY------------------------ 424 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~----------~~~~------------------------ 424 (502)
...+.+++|+|++.. .++++++ ++.+.+|++... +.+.
T Consensus 270 ~~~v~~~~~~~~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (814)
T 3mkq_A 270 LERSWCIATHPTGRK-------NYIASGF-DNGFTVLSLGNDEPTLSLDPVGKLVWSGGKNAAASDIFTAVIRGNEEVEQ 341 (814)
T ss_dssp SSSEEEEEECTTCGG-------GEEEEEE-TTEEEEEECSCCSCCEEECSSSEEEEECCTTSCTTCEEEEECCSCCCCCS
T ss_pred CCcEEEEEEccCCCc-------eEEEEEe-CCCEEEEEcCCCCceeEECCCCCEEEECcccccceeeeeeeccccccccc
Confidence 999999999998752 2455554 667888887543 2222
Q ss_pred ---------EeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010759 425 ---------SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 425 ---------~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
.+..+...+.+++|+|+|++|++++ |+.+.+|++....... .+.+.+++|+|+|+++|+++.++.|
T Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~la~~~-~~~~~i~~~~~~~~~~----~~~i~~~~~spdg~~la~~~~~g~v 416 (814)
T 3mkq_A 342 DEPLSLQTKELGSVDVFPQSLAHSPNGRFVTVVG-DGEYVIYTALAWRNKA----FGKCQDFVWGPDSNSYALIDETGQI 416 (814)
T ss_dssp SSCBCCCCEEECCCSSCCSEEEECTTSSEEEEEE-TTEEEEEETTTTEEEE----EEECSEEEECTTSSCEEEECTTCCE
T ss_pred CccceeeeecCCCCccCCceeEECCCCCEEEEec-CCEEEEEECccccccC----CCceEEEEEeCCCCeEEEEeCCCcE
Confidence 1123445688999999999999999 8999999987554332 2346789999999999999999999
Q ss_pred EEEE
Q 010759 496 CVLD 499 (502)
Q Consensus 496 ~v~~ 499 (502)
.+|+
T Consensus 417 ~l~~ 420 (814)
T 3mkq_A 417 KYYK 420 (814)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 67
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=2e-38 Score=307.30 Aligned_cols=283 Identities=14% Similarity=0.119 Sum_probs=245.4
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC-
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT- 226 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~- 226 (502)
.+..+|...|++++|+|++++|++|+.|+.|+||++.++... ...... ..+...|.+++|+|+++
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~----------~~~~~~----~~~~~~v~~~~~~~~~~~ 70 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN----------VDLLQS----LRYKHPLLCCNFIDNTDL 70 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE----------EEEEEE----EECSSCEEEEEEEESSSE
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc----------ccceee----eecCCceEEEEECCCCCc
Confidence 345689999999999999999999999999999998765310 011111 13567899999999999
Q ss_pred EEEEEECCCcEEEEEC-CCceeEeecC--CCCCEEEEEecCCCCEEEEecCCCeEEEEeccC---------cceeEEeee
Q 010759 227 LLATGSYDGQARIWST-NGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---------EEWKQQFEF 294 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~-~~~~~~~~~~--h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~---------~~~~~~~~~ 294 (502)
+|++|+.||.|++|+. .......+.+ |...|++++|+| +++|++++.|+.|++||+++ ++....+.
T Consensus 71 ~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~- 148 (342)
T 1yfq_A 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK- 148 (342)
T ss_dssp EEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-
T ss_pred EEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-
Confidence 9999999999999999 8777788888 999999999999 99999999999999999987 66666665
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCC-Cc--ceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCC-
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NR--PIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD- 369 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~--~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~- 369 (502)
+...+.++.|.++. +++++.++.|++|++.. .. .......|...+.+++|+| ++++|++++.||.|++|++...
T Consensus 149 ~~~~v~~~~~~~~~-l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR-LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp SCCCEEEEEECSSE-EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTC
T ss_pred eCCceEEEEecCCc-EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCC
Confidence 77888999998776 88999999999999987 43 3334557888999999999 9999999999999999999877
Q ss_pred -----ceeeecccCCC---------cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCEE
Q 010759 370 -----KYVHDLREHSK---------EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVY 434 (502)
Q Consensus 370 -----~~~~~~~~~~~---------~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~ 434 (502)
.....+..|.. .|.+++|+|++. +|++|+.||.|++||+.+++.+..+.+| ..+|+
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~ 298 (342)
T 1yfq_A 228 DDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK---------FLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVV 298 (342)
T ss_dssp CSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEECCCCSSSEEE
T ss_pred cccccccceeeecccccccccccceeEEEEEEcCCCC---------EEEEecCCceEEEEcCccHhHhhhhhcccCCCce
Confidence 67777777755 999999999886 6899999999999999999999999998 99999
Q ss_pred EEEECCCCCEEEEEeCCCc-EEEEe
Q 010759 435 SLAFSPTGEYLASGSLDKS-MHIWS 458 (502)
Q Consensus 435 ~l~~spdg~~lasgs~Dg~-i~iw~ 458 (502)
+++ |++++|++|+.||+ .+.|.
T Consensus 299 ~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 299 KIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEE--ECSSEEEEEEECTHHHHCSS
T ss_pred Eec--CCCCeEEEEecCCccccccc
Confidence 999 99999999999998 55555
No 68
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.3e-39 Score=322.56 Aligned_cols=279 Identities=19% Similarity=0.358 Sum_probs=245.5
Q ss_pred CeEEEEECCCCC-EEEEE----------ECCCcEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEE
Q 010759 215 DVTTLDWNGEGT-LLATG----------SYDGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIV 280 (502)
Q Consensus 215 ~V~~l~~s~~~~-~l~sg----------~~dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~i 280 (502)
.|.+++|+|+++ +|++| +.|+.|+||+..... ......|...|++++|+|++.+|++|+.|+.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~v 93 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLEL 93 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEE
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEE
Confidence 478899999997 99999 889999999987542 2223468899999999999999999999999999
Q ss_pred EeccC----cceeEEeeecccCeEEEecCC--CceEEEEcCCCeEEEEEcCCCc------cee---eecCCCcceeEEEE
Q 010759 281 WDVKT----EEWKQQFEFHSGPTLDVDWRN--NVSFATSSTDNMIYVCKIGENR------PIK---TFAGHQGEVNCVKW 345 (502)
Q Consensus 281 wd~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d~~i~~~~~~~~~------~~~---~~~~h~~~v~~v~~ 345 (502)
||+.+ ......+..|...+.++.|.. ...+++++.|+.|++|++.... ... .+.+|...|.+++|
T Consensus 94 w~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 173 (416)
T 2pm9_A 94 YSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAW 173 (416)
T ss_dssp ECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEE
T ss_pred eecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEe
Confidence 99987 457778888999999999974 5688999999999999998765 222 34679999999999
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCceeeecccC------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC---eEEEE
Q 010759 346 DPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREH------SKEIYTIRWSPTGSGTNNPNQQLILASASFDS---TVKLW 415 (502)
Q Consensus 346 ~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg---~i~iw 415 (502)
+|+ +.+|++++.||.|++||+++++.+..+..+ ...+.+++|+|++. .+|++++.|+ .|++|
T Consensus 174 ~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--------~~l~~~~~d~~~~~i~~~ 245 (416)
T 2pm9_A 174 NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNS--------TRVATATGSDNDPSILIW 245 (416)
T ss_dssp CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCT--------TEEEEEECCSSSCCCCEE
T ss_pred CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCC--------CEEEEEECCCCCceEEEE
Confidence 999 789999999999999999999988888776 78899999999874 2789999998 99999
Q ss_pred eCCCC-eEEEEee-CCCCCEEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCC-CEEEEEE
Q 010759 416 DVELG-KLLYSLN-GHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEG-DKIAACF 490 (502)
Q Consensus 416 d~~~~-~~~~~~~-~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g-~~la~~~ 490 (502)
|++++ .++..+. +|...|++++|+| ++.+|++++.||.|++|++.+++.+..+.++ ..|.+++|+|++ .+||+++
T Consensus 246 d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~ 325 (416)
T 2pm9_A 246 DLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS 325 (416)
T ss_dssp ETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC
T ss_pred eCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe
Confidence 99986 6677777 8999999999999 8999999999999999999999999888764 569999999999 8999999
Q ss_pred CCCeEEEEEee
Q 010759 491 ANHTVCVLDFR 501 (502)
Q Consensus 491 ~~~~v~v~~~~ 501 (502)
.|+.|+|||++
T Consensus 326 ~d~~i~iw~~~ 336 (416)
T 2pm9_A 326 FDNKIEVQTLQ 336 (416)
T ss_dssp SSSEEEEEESC
T ss_pred cCCcEEEEEcc
Confidence 99999999985
No 69
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=5e-39 Score=314.79 Aligned_cols=288 Identities=14% Similarity=0.130 Sum_probs=221.6
Q ss_pred cceeEEEECCCCCEEEEEeCCC-------cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 155 SEVCACAWSPAGSLLASGSGDS-------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~-------~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.||+|++|+|||++|++||.|. .|++|++..+...... ....... .....+...|.+++++ +..
T Consensus 15 ~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~-----~~~~~~~--~~l~~~~~~v~s~~~~--~~~ 85 (365)
T 4h5i_A 15 YPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKE-----QFHILSE--FALEDNDDSPTAIDAS--KGI 85 (365)
T ss_dssp SCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHH-----HEEEEEE--EECCTTSCCCCEEEEE--TTE
T ss_pred CCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceee-----eeeeeeE--EEccCCCCceEEEEeC--CCE
Confidence 4799999999999999998654 5999998754321100 0011111 1123445667777765 446
Q ss_pred EEEE-----------ECCCcEEEEECCCc--eeE---e-----ecCCCCCEEEEEecCCCCEEEE--ecCCCeEEEEecc
Q 010759 228 LATG-----------SYDGQARIWSTNGD--LKC---T-----LSKHKGPIFSLKWNKKGDYLLT--GSCDKTAIVWDVK 284 (502)
Q Consensus 228 l~sg-----------~~dg~i~iw~~~~~--~~~---~-----~~~h~~~V~~l~~~~~~~~l~s--gs~D~~v~iwd~~ 284 (502)
+++| +.|+.+++|+.... ... . ...+...+.+++|+|+|+++++ ++.|++|+|||+.
T Consensus 86 ~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~ 165 (365)
T 4h5i_A 86 ILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPS 165 (365)
T ss_dssp EEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETT
T ss_pred EEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECC
Confidence 6655 45778999986431 111 1 1234456899999999998764 5578999999999
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEEEeCCC---
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDDV--- 359 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~sgs~dg--- 359 (502)
+++.+..+. |...+.++.|.++..++.++.++.+.+|+...+..+. ...+|...|.+++|+|+++++++++.|+
T Consensus 166 ~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~ 244 (365)
T 4h5i_A 166 DLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKG 244 (365)
T ss_dssp TTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCC
T ss_pred CCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcce
Confidence 999888775 6678999999876655555556667777776665543 4557889999999999999999999887
Q ss_pred -cEEEEeCCCCce----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eCCCCCE
Q 010759 360 -TAKIWNMKQDKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NGHREPV 433 (502)
Q Consensus 360 -~i~iwd~~~~~~----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~h~~~v 433 (502)
.+++|++..... ...+..|...|++++|+|+|. +||+|+.|++|+|||+++++++..+ .+|..+|
T Consensus 245 ~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~---------~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V 315 (365)
T 4h5i_A 245 IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE---------LAVLASNDNSIALVKLKDLSMSKIFKQAHSFAI 315 (365)
T ss_dssp EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC---------EEEEEETTSCEEEEETTTTEEEEEETTSSSSCE
T ss_pred eEEeecccccceecceeeeeecCCCCCeEeEEECCCCC---------ceEEEcCCCEEEEEECCCCcEEEEecCcccCCE
Confidence 688898876543 345677889999999999997 8999999999999999999999885 7899999
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 434 YSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 434 ~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
++|+|||||++|||||.|++|+||++..
T Consensus 316 ~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 316 TEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred EEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 9999999999999999999999999864
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.5e-38 Score=306.32 Aligned_cols=303 Identities=19% Similarity=0.301 Sum_probs=223.3
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC--CC
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG--EG 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~--~~ 225 (502)
..+.+|...|++++|+|++++||+|+.||.|++|++.++... ...... ...|...|++++|+| ++
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~----~~~~~~~v~~~~~~~~~d~ 71 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSN---------WELSDS----WRAHDSSIVAIDWASPEYG 71 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCC---------EEEEEE----EECCSSCEEEEEECCGGGC
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCc---------ceecce----eccCCCcEEEEEEcCCCCC
Confidence 567899999999999999999999999999999998764311 111122 224578899999999 69
Q ss_pred CEEEEEECCCcEEEEECCC----------ceeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 226 TLLATGSYDGQARIWSTNG----------DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~----------~~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
.+|++|+.||.|++|+... .....+..|..+|++++|+|+ +++|++++.|++|++||+++++....+.
T Consensus 72 ~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~ 151 (351)
T 3f3f_A 72 RIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWT 151 (351)
T ss_dssp SEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCE
T ss_pred CEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccc
Confidence 9999999999999999865 335677899999999999999 9999999999999999998877554433
Q ss_pred -------------ecccCeEEEecCC----CceEEEEcCCCeEEEEEcCCCcc--eeeecCCCcceeEEEEcCCC----C
Q 010759 294 -------------FHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTG----S 350 (502)
Q Consensus 294 -------------~~~~~~~~~~~~~----~~~~~~~~~d~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~----~ 350 (502)
.+...+.++.|.+ ...+++++.++.+.+|....... +..+.+|...|.+++|+|++ +
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~ 231 (351)
T 3f3f_A 152 LTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQ 231 (351)
T ss_dssp EEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSE
T ss_pred ccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcce
Confidence 3455677777754 56788899999998888776654 67788999999999999998 8
Q ss_pred EEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC
Q 010759 351 LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR 430 (502)
Q Consensus 351 ~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~ 430 (502)
+|++|+.||.|++||++.+........+........+++...... .....+.....+.+|+....+.+..+.+|.
T Consensus 232 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 306 (351)
T 3f3f_A 232 LIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDA-----QGRSDSNTEEKAELQSNLQVELLSEHDDHN 306 (351)
T ss_dssp EEEEEETTSCEEEEEEEECC--------------------------------------------CCSEEEEEEEEECTTS
T ss_pred EEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCccccccc-----ccccccccceeeeecccccccEEEEEeccc
Confidence 999999999999999987654433322222222222222221000 011233445567777777778889999999
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 431 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
..|++++|+|++++|++|+.||.|+||++.+++.+..+
T Consensus 307 ~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~ 344 (351)
T 3f3f_A 307 GEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCM 344 (351)
T ss_dssp SCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEE
T ss_pred ccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhe
Confidence 99999999999999999999999999999987655443
No 71
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-39 Score=321.59 Aligned_cols=291 Identities=18% Similarity=0.233 Sum_probs=237.5
Q ss_pred CCCceeec-cccccceeEEEECC-CCCEEEEEeCCCcEEEEecCC---CCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 143 PNSDVTIL-EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIAD---GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 143 ~~~~~~~l-~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
....+..+ .+|.+.|++++|+| ++++||||+.||+|+|||+.+ +.... . .. ...|...|.
T Consensus 51 ~g~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----~--~~--------~~~h~~~v~ 115 (437)
T 3gre_A 51 RGKLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYS-----S--SL--------TYDCSSTVT 115 (437)
T ss_dssp CCCEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCS-----C--SE--------EEECSSCEE
T ss_pred cceEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccc-----e--ee--------eccCCCCEE
Confidence 34456667 89999999999999 999999999999999999865 22100 0 00 012567899
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECC----CceeEeec----------C--CCCCEEEEE--ecCCCCEEEEecCCCeEE
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTN----GDLKCTLS----------K--HKGPIFSLK--WNKKGDYLLTGSCDKTAI 279 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~----~~~~~~~~----------~--h~~~V~~l~--~~~~~~~l~sgs~D~~v~ 279 (502)
+++|+|++.+|++|+.||.|++|++. +.....+. . +...+.++. +++++.+|++|+.|++|+
T Consensus 116 ~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 116 QITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred EEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 99999999999999999999999973 33222222 1 556677776 567899999999999999
Q ss_pred EEeccCcceeEEeee--cccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcC----CCCE
Q 010759 280 VWDVKTEEWKQQFEF--HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP----TGSL 351 (502)
Q Consensus 280 iwd~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p----~~~~ 351 (502)
+||+++++....+.. |...+.++.|.+ ...+++++.|+.|++|++....++..+. +|...|.+++|+| ++.+
T Consensus 196 iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~ 275 (437)
T 3gre_A 196 IFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVI 275 (437)
T ss_dssp EEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEE
T ss_pred EEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccE
Confidence 999999999998887 889999999964 4567889999999999999999888876 7888999996654 6789
Q ss_pred EEEEeCCCcEEEEeCCCCceeeecccCCC--------------------------cEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 352 LASCSDDVTAKIWNMKQDKYVHDLREHSK--------------------------EIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 352 l~sgs~dg~i~iwd~~~~~~~~~~~~~~~--------------------------~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
|++|+.||.|++||+.+++++..+..|.. .|.+++|+ ++ .+|++
T Consensus 276 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~---------~~l~s 345 (437)
T 3gre_A 276 VVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND---------KILLT 345 (437)
T ss_dssp EEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT---------EEEEE
T ss_pred EEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc---------eEEEe
Confidence 99999999999999999988777765543 45555555 32 37899
Q ss_pred EeCCCeEEEEeCCCCeEEEEeeC-------------------------------------CCCCEEEEEECCC--CCEEE
Q 010759 406 ASFDSTVKLWDVELGKLLYSLNG-------------------------------------HREPVYSLAFSPT--GEYLA 446 (502)
Q Consensus 406 gs~dg~i~iwd~~~~~~~~~~~~-------------------------------------h~~~v~~l~~spd--g~~la 446 (502)
|+.||.|++||+.+++.+..+.+ |...|++++|+++ +.+|+
T Consensus 346 ~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~ 425 (437)
T 3gre_A 346 DEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLV 425 (437)
T ss_dssp EGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEE
T ss_pred cCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEE
Confidence 99999999999998876666654 8899999999998 78999
Q ss_pred EEeCCCcEEEEe
Q 010759 447 SGSLDKSMHIWS 458 (502)
Q Consensus 447 sgs~Dg~i~iw~ 458 (502)
+|+.||.|+||+
T Consensus 426 s~~~dG~I~iw~ 437 (437)
T 3gre_A 426 ACDNSGLIGIFQ 437 (437)
T ss_dssp EEETTSCEEEEC
T ss_pred EEcCCceEEEeC
Confidence 999999999995
No 72
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=7.3e-38 Score=305.89 Aligned_cols=293 Identities=18% Similarity=0.301 Sum_probs=241.3
Q ss_pred cCCCceeeccccccceeEEEECCC---CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEE
Q 010759 142 IPNSDVTILEGHTSEVCACAWSPA---GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTT 218 (502)
Q Consensus 142 ~~~~~~~~l~~H~~~V~~~~~spd---~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 218 (502)
.|...+..+.+|...|++++|+|+ |++|++|+.||.|+||++.+... . .... ...|...|.+
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------~--~~~~----~~~h~~~v~~ 91 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------T--IPKA----QQMHTGPVLD 91 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------E--EEEE----EEECSSCEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------e--eEEE----eccccCCEEE
Confidence 455667889999999999999999 69999999999999999876211 0 1111 1235778999
Q ss_pred EEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEe--cCCCCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 219 LDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKW--NKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 219 l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~--~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
++|+|++++|++|+.||.|++|+........+..|..+|++++| +|++.+|++|+.|++|++||+++++....+..+.
T Consensus 92 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~ 171 (368)
T 3mmy_A 92 VCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE 171 (368)
T ss_dssp EEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS
T ss_pred EEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC
Confidence 99999999999999999999999987776677889999999999 8999999999999999999999998888777654
Q ss_pred cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee--cCCCcceeEEEEcCCCCE----EEEEeCCCcEEEEeCCCC-
Q 010759 297 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF--AGHQGEVNCVKWDPTGSL----LASCSDDVTAKIWNMKQD- 369 (502)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~----l~sgs~dg~i~iwd~~~~- 369 (502)
.+..+.+... .+++++.++.+.+|++......... ..+...+.++++.++... +++|+.||.|++|++...
T Consensus 172 -~~~~~~~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~ 249 (368)
T 3mmy_A 172 -RCYCADVIYP-MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPN 249 (368)
T ss_dssp -CEEEEEEETT-EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSC
T ss_pred -CceEEEecCC-eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCC
Confidence 4555665544 5666777889999999765432221 233455667777666554 999999999999999887
Q ss_pred --ceeeecccCCC------------cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEE
Q 010759 370 --KYVHDLREHSK------------EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS 435 (502)
Q Consensus 370 --~~~~~~~~~~~------------~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 435 (502)
..+..+..|.. .|.+++|+|++. +|++|+.||.|++||+.+++++..+.+|..+|++
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~ 320 (368)
T 3mmy_A 250 PAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHG---------TLATVGSDGRFSFWDKDARTKLKTSEQLDQPISA 320 (368)
T ss_dssp HHHHSEEEECSEEC----CCCEEECCEEEEEECTTTC---------CEEEEETTSCEEEEETTTTEEEEECCCCSSCEEE
T ss_pred ccccceeeeeeecccccccccccccceEEEEEecCCC---------EEEEEccCCeEEEEECCCCcEEEEecCCCCCceE
Confidence 45666666665 799999999986 6899999999999999999999999999999999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
++|+|+|++||+|+.|+..+.|++.
T Consensus 321 ~~~s~~g~~l~~~s~d~~~~~~~~~ 345 (368)
T 3mmy_A 321 CCFNHNGNIFAYASSYDWSKGHEFY 345 (368)
T ss_dssp EEECTTSSCEEEEECCCSTTCGGGC
T ss_pred EEECCCCCeEEEEeccccccccccc
Confidence 9999999999999999866655543
No 73
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.3e-37 Score=308.04 Aligned_cols=249 Identities=26% Similarity=0.420 Sum_probs=208.2
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
|...|++++|+|+|++||+|+.|++|+|||+.++.. ... ..+|...|.+++|+|++.+|++|+
T Consensus 122 ~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~-------------~~~----~~~h~~~v~~~~~~p~~~~l~s~s 184 (393)
T 1erj_A 122 SDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKI-------------VMI----LQGHEQDIYSLDYFPSGDKLVSGS 184 (393)
T ss_dssp CCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEE-------------EEE----ECCCSSCEEEEEECTTSSEEEEEE
T ss_pred CceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcE-------------EEE----EccCCCCEEEEEEcCCCCEEEEec
Confidence 334599999999999999999999999999876531 112 234577899999999999999999
Q ss_pred CCCcEEEEECCCceeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEE
Q 010759 233 YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFA 311 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (502)
.|++|++||+..........+...|.+++|+| ++.+|++|+.|++|++||++++.....+..
T Consensus 185 ~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~----------------- 247 (393)
T 1erj_A 185 GDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDS----------------- 247 (393)
T ss_dssp TTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------------------
T ss_pred CCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecc-----------------
Confidence 99999999987654433334677899999999 889999999999999999988765543321
Q ss_pred EEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC------------ceeeecccCC
Q 010759 312 TSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD------------KYVHDLREHS 379 (502)
Q Consensus 312 ~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~------------~~~~~~~~~~ 379 (502)
......+|...|.+++|+|++++|++|+.|++|++||+++. .+...+.+|.
T Consensus 248 -----------------~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~ 310 (393)
T 1erj_A 248 -----------------ENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK 310 (393)
T ss_dssp ----------------------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCS
T ss_pred -----------------cccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEeccc
Confidence 01123578999999999999999999999999999998753 3455677899
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC------CCCEEEEEeCCCc
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP------TGEYLASGSLDKS 453 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp------dg~~lasgs~Dg~ 453 (502)
..|.+++|+|++. +|++|+.||.|++||+.+++++..+.+|...|++++|+| ++.+||+||.||+
T Consensus 311 ~~v~~~~~~~~~~---------~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~ 381 (393)
T 1erj_A 311 DFVLSVATTQNDE---------YILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCK 381 (393)
T ss_dssp SCEEEEEECGGGC---------EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSE
T ss_pred CcEEEEEECCCCC---------EEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCc
Confidence 9999999999886 799999999999999999999999999999999999986 6889999999999
Q ss_pred EEEEeCCC
Q 010759 454 MHIWSLKE 461 (502)
Q Consensus 454 i~iw~~~~ 461 (502)
|+||++..
T Consensus 382 i~iW~~~~ 389 (393)
T 1erj_A 382 ARIWKYKK 389 (393)
T ss_dssp EEEEEEEE
T ss_pred EEECcccc
Confidence 99999754
No 74
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.8e-38 Score=306.16 Aligned_cols=281 Identities=14% Similarity=0.239 Sum_probs=236.2
Q ss_pred cCCCCeEEEEECCCCCEE-EEEEC---CCcEEEEECCCcee--EeecCCCCCEEEEEecCC---CCEEEEecCCCeEEEE
Q 010759 211 EKSKDVTTLDWNGEGTLL-ATGSY---DGQARIWSTNGDLK--CTLSKHKGPIFSLKWNKK---GDYLLTGSCDKTAIVW 281 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l-~sg~~---dg~i~iw~~~~~~~--~~~~~h~~~V~~l~~~~~---~~~l~sgs~D~~v~iw 281 (502)
+|...|.+++|+|++..+ ++|+. ||.|++|+...... ....+|..+|++++|+|+ +.+|++|+.|+.|++|
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iw 95 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIW 95 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEE
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEE
Confidence 367889999999999655 45655 99999999875433 233479999999999998 6999999999999999
Q ss_pred eccCcc-eeEEeeecccCeEEEecC-------CCceEEEEcCCCeEEEEEcCCCc-ceeeecCCCc----ceeEEE----
Q 010759 282 DVKTEE-WKQQFEFHSGPTLDVDWR-------NNVSFATSSTDNMIYVCKIGENR-PIKTFAGHQG----EVNCVK---- 344 (502)
Q Consensus 282 d~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~d~~i~~~~~~~~~-~~~~~~~h~~----~v~~v~---- 344 (502)
|+.+++ ....+..|...+.++.|. +...+++++.|+.|++|++.... ++..+..|.+ .+.+++
T Consensus 96 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 175 (357)
T 3i2n_A 96 NLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNA 175 (357)
T ss_dssp CTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECC
T ss_pred eCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEec
Confidence 999888 788888999999998652 35578899999999999999876 7777776655 788888
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEcc---CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010759 345 WDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP---TGSGTNNPNQQLILASASFDSTVKLWDVELGK 421 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp---~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 421 (502)
|+|++++|++++.||.|++||+++++.... ..|...+.+++|+| ++. +|++|+.||.|++||+++++
T Consensus 176 ~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~---------~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 176 YNQEERVVCAGYDNGDIKLFDLRNMALRWE-TNIKNGVCSLEFDRKDISMN---------KLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CC-CCCEEEEEETTSEEEEEETTTTEEEEE-EECSSCEEEEEESCSSSSCC---------EEEEEESTTEEEEEEEEEEE
T ss_pred cCCCCCEEEEEccCCeEEEEECccCceeee-cCCCCceEEEEcCCCCCCCC---------EEEEECCCCeEEEEeCcCCC
Confidence 789999999999999999999998887543 56788999999999 654 78899999999999998765
Q ss_pred EEEE-----eeCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEeCCCC-------------------eeEEEEec-CCCEE
Q 010759 422 LLYS-----LNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKEG-------------------KIVKTYTG-NGGIF 475 (502)
Q Consensus 422 ~~~~-----~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~~-------------------~~~~~~~~-~~~i~ 475 (502)
.+.. +.+|...|++++|+|+++ +|++|+.||.|++|++..+ +.+..+.+ ...|.
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 4433 348999999999999998 8999999999999998754 34555554 45699
Q ss_pred EEEECCCCCEEE-EEECCCeEEEEEee
Q 010759 476 EVCWNKEGDKIA-ACFANHTVCVLDFR 501 (502)
Q Consensus 476 ~~~ws~~g~~la-~~~~~~~v~v~~~~ 501 (502)
+++|+|+|++|| +|+.|+.|+|||+.
T Consensus 326 ~~~~s~~~~~l~~s~~~d~~i~iw~~~ 352 (357)
T 3i2n_A 326 SLDWSPDKRGLCVCSSFDQTVRVLIVT 352 (357)
T ss_dssp EEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred EEEEcCCCCeEEEEecCCCcEEEEECC
Confidence 999999999998 79999999999986
No 75
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.5e-37 Score=306.44 Aligned_cols=276 Identities=23% Similarity=0.469 Sum_probs=239.4
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeE--eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
-.+..|+||++ ++|++|. |++|+|||... .... .+.+|...|++|+|+|+|++|++|+.|++|++||+.+++.+.
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~ 183 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLR 183 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred ccceeEEECCC-CEEEEEe-CCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEE
Confidence 34678999986 5777665 99999999865 3333 345788899999999999999999999999999999999999
Q ss_pred EeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 291 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
.+..|...+.++.+. ...+++++.|+.+++|+.... ..+..+.+|...+.++.|+|++.++++++.|+.+++|+..++
T Consensus 184 ~~~~h~~~v~~~s~~-~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~ 262 (420)
T 4gga_A 184 NMTSHSARVGSLSWN-SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPG 262 (420)
T ss_dssp EECCCSSCEEEEEEE-TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCC
T ss_pred EEeCCCCceEEEeeC-CCEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccc
Confidence 999999999998885 456889999999999998764 456778899999999999999999999999999999999876
Q ss_pred c----eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEE--EEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC
Q 010759 370 K----YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA--SASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 370 ~----~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~--sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~ 443 (502)
. .+.....|...|.+++|+|.+.. +++ +|+.|++|++||+.+++++..+..| ..|.++.|+|++.
T Consensus 263 ~~~~~~~~~~~~~~~~V~~~~~~p~~~~--------~la~~~gs~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~~~~~~ 333 (420)
T 4gga_A 263 EGGWVPLQTFTQHQGAVKAVAWCPWQSN--------VLATGGGTSDRHIRIWNVCSGACLSAVDAH-SQVCSILWSPHYK 333 (420)
T ss_dssp SSCSCCSEEECCCSSCEEEEEECTTCTT--------EEEEEECTTTCEEEEEETTTTEEEEEEECS-SCEEEEEEETTTT
T ss_pred cccceeeeeecccCCceeeeeeCCCccc--------EEEEEeecCCCEEEEEeCCccccceeeccc-cceeeeeecCCCC
Confidence 4 34556778899999999998752 444 4568999999999999999988865 5789999999999
Q ss_pred EEEEEe--CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 444 YLASGS--LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs--~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.|++++ .|+.|+|||+.+++.+.++.+| +.|++++|+|+|++||+|+.|++|+|||+.
T Consensus 334 ~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~ 394 (420)
T 4gga_A 334 ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 394 (420)
T ss_dssp EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 998765 6899999999999999999875 569999999999999999999999999974
No 76
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.4e-37 Score=309.98 Aligned_cols=278 Identities=21% Similarity=0.363 Sum_probs=246.4
Q ss_pred CCCCeEEEEECCCCC-EEEEEECCCcEEEEEC----CCce-------eEeecC----------CCCCEEEEEecCCCCEE
Q 010759 212 KSKDVTTLDWNGEGT-LLATGSYDGQARIWST----NGDL-------KCTLSK----------HKGPIFSLKWNKKGDYL 269 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~-~l~sg~~dg~i~iw~~----~~~~-------~~~~~~----------h~~~V~~l~~~~~~~~l 269 (502)
|...|.+++|+|+++ +|++|+.||.|++|++ .... ...+.. |.+.|++++|+|++++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 356899999999999 9999999999999998 5433 333333 67899999999999999
Q ss_pred EEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcc---------
Q 010759 270 LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE--------- 339 (502)
Q Consensus 270 ~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~--------- 339 (502)
++|+.|+.|++|| .++.....+..|..++.++.|.. ...+++++.|+.|++|++.....+..+..+...
T Consensus 124 ~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (425)
T 1r5m_A 124 VTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENH 202 (425)
T ss_dssp EEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC------------
T ss_pred EEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccc
Confidence 9999999999999 67777888888999999999964 456888999999999999999988888887776
Q ss_pred ------eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 340 ------VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 340 ------v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
+.+++|+|++ .+++++.||.|++||+.+++.+..+..|...|.+++|+|++. +|++++.||.|+
T Consensus 203 ~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~l~~~~~d~~i~ 272 (425)
T 1r5m_A 203 SGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNK---------LLLSASDDGTLR 272 (425)
T ss_dssp ---CCCBSCCEEEETT-EEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTT---------EEEEEETTSCEE
T ss_pred cCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCC---------EEEEEcCCCEEE
Confidence 9999999985 578899999999999999999888999999999999999886 789999999999
Q ss_pred EEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECC
Q 010759 414 LWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~ 492 (502)
+||+.+++.+..+.+|...|++++|+|++ +|++++.||.|++|++.+++.+..+.. ...+.+++|+|+|++||+++.|
T Consensus 273 i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~d 351 (425)
T 1r5m_A 273 IWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGVPIFAGRISQDGQKYAVAFMD 351 (425)
T ss_dssp EECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTCCEEEEEECTTSSEEEEEETT
T ss_pred EEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCccEEEEEEcCCCCEEEEEECC
Confidence 99999999999999999999999999999 999999999999999999999888876 4579999999999999999999
Q ss_pred CeEEEEEee
Q 010759 493 HTVCVLDFR 501 (502)
Q Consensus 493 ~~v~v~~~~ 501 (502)
+.|.|||++
T Consensus 352 g~i~i~~~~ 360 (425)
T 1r5m_A 352 GQVNVYDLK 360 (425)
T ss_dssp SCEEEEECH
T ss_pred CeEEEEECC
Confidence 999999975
No 77
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-38 Score=304.69 Aligned_cols=253 Identities=25% Similarity=0.419 Sum_probs=206.0
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecC--CCCEEEEecCCCeEEEEecc
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~ 284 (502)
.+|...|++++|+|+|++|++|+.|++|+||++... ....+.+|.++|++++|+| ++++|++|+.|++|++||++
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~ 89 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREE 89 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCS
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECC
Confidence 356789999999999999999999999999998643 3457889999999999986 48899999999999999987
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAK 362 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~ 362 (502)
++.+. ++..+.+|...|.+++|+|+ +.+|++|+.|++|+
T Consensus 90 ~~~~~---------------------------------------~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~ 130 (316)
T 3bg1_A 90 NGTWE---------------------------------------KSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAIS 130 (316)
T ss_dssp SSCCC---------------------------------------EEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEE
T ss_pred CCcce---------------------------------------EEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEE
Confidence 65321 12345689999999999998 78999999999999
Q ss_pred EEeCCCCce---eeecccCCCcEEEEEEccCCCCC--------CCCCCcEEEEEEeCCCeEEEEeCCCC---eEEEEeeC
Q 010759 363 IWNMKQDKY---VHDLREHSKEIYTIRWSPTGSGT--------NNPNQQLILASASFDSTVKLWDVELG---KLLYSLNG 428 (502)
Q Consensus 363 iwd~~~~~~---~~~~~~~~~~i~~~~~sp~g~~~--------~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~ 428 (502)
+||++.+.. ...+..|...+.+++|+|+.... ..+....+|++|+.|++|++||++.. +++..+.+
T Consensus 131 lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~ 210 (316)
T 3bg1_A 131 LLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEA 210 (316)
T ss_dssp EEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBC
T ss_pred EEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeeccc
Confidence 999987632 35567788899999999974210 00111236899999999999999755 56778899
Q ss_pred CCCCEEEEEECCCC----CEEEEEeCCCcEEEEeCCCC---e-eEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 429 HREPVYSLAFSPTG----EYLASGSLDKSMHIWSLKEG---K-IVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 429 h~~~v~~l~~spdg----~~lasgs~Dg~i~iw~~~~~---~-~~~~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
|..+|++++|+|++ .+||+|+.||+|+||++.+. . ....+. ....|++++|+|+|++||+|+.|++|+||+
T Consensus 211 h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~ 290 (316)
T 3bg1_A 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWK 290 (316)
T ss_dssp CSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEE
T ss_pred CCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEE
Confidence 99999999999987 89999999999999998762 1 112222 356799999999999999999999999999
Q ss_pred ee
Q 010759 500 FR 501 (502)
Q Consensus 500 ~~ 501 (502)
..
T Consensus 291 ~~ 292 (316)
T 3bg1_A 291 ES 292 (316)
T ss_dssp EC
T ss_pred EC
Confidence 64
No 78
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=9e-37 Score=296.42 Aligned_cols=248 Identities=25% Similarity=0.423 Sum_probs=206.8
Q ss_pred ccCCCCeEEEEE-----CC-CCCEEEEEECCCcEEEEECCC--------ceeEeecCCCCCEEEEEecCCCCEEEEecCC
Q 010759 210 NEKSKDVTTLDW-----NG-EGTLLATGSYDGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD 275 (502)
Q Consensus 210 ~~~~~~V~~l~~-----s~-~~~~l~sg~~dg~i~iw~~~~--------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D 275 (502)
.+|...|++++| ++ ++.+|++|+.|++|++|+... .....+.+|...|++++|+|++.+|++|+.|
T Consensus 18 ~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D 97 (343)
T 2xzm_R 18 EGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWD 97 (343)
T ss_dssp ECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETT
T ss_pred ccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCC
Confidence 456889999999 76 999999999999999999753 2345688999999999999999999999999
Q ss_pred CeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg 355 (502)
++|++||+++++. +..+.+|.+.|.+++|+|++++|++|
T Consensus 98 ~~v~lwd~~~~~~-----------------------------------------~~~~~~h~~~v~~v~~sp~~~~l~s~ 136 (343)
T 2xzm_R 98 KTLRLWDLRTGTT-----------------------------------------YKRFVGHQSEVYSVAFSPDNRQILSA 136 (343)
T ss_dssp SEEEEEETTSSCE-----------------------------------------EEEEECCCSCEEEEEECSSTTEEEEE
T ss_pred CcEEEEECCCCcE-----------------------------------------EEEEcCCCCcEEEEEECCCCCEEEEE
Confidence 9999999987643 23456788999999999999999999
Q ss_pred eCCCcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCC--CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010759 356 SDDVTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGT--NNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 356 s~dg~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~--~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 431 (502)
+.|++|++||+........ ...|...|.+++|+|++... ..|.. .+|++++.||.|++|| ...+....+.+|..
T Consensus 137 ~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~ 214 (343)
T 2xzm_R 137 GAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFA-PYFASVGWDGRLKVWN-TNFQIRYTFKAHES 214 (343)
T ss_dssp ETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSC-CEEEEEETTSEEEEEE-TTTEEEEEEECCSS
T ss_pred cCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCC-CEEEEEcCCCEEEEEc-CCCceeEEEcCccc
Confidence 9999999999974433221 23688899999999987421 11111 3789999999999999 45778888999999
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+|++++|+|+|++||+|+.||.|++||+. .......+.....|.+++|+|++.+|+++. |+.|++||+.
T Consensus 215 ~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~v~iw~~~ 284 (343)
T 2xzm_R 215 NVNHLSISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQGVKIFNLM 284 (343)
T ss_dssp CEEEEEECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSCEEEEESS
T ss_pred cceEEEECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCCEEEEEeC
Confidence 99999999999999999999999999994 444555665566799999999999887664 6779999974
No 79
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.3e-37 Score=310.72 Aligned_cols=294 Identities=22% Similarity=0.401 Sum_probs=239.0
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~ 227 (502)
....+|...|+|++| ++++|++|+.||+|++||+.++.. ...+ ..|...|.+++| ++.+
T Consensus 127 ~~~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~-------------~~~~----~~h~~~v~~l~~--~~~~ 185 (435)
T 1p22_A 127 HCRSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLEC-------------KRIL----TGHTGSVLCLQY--DERV 185 (435)
T ss_dssp ECCCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCE-------------EEEE----CCCSSCEEEEEC--CSSE
T ss_pred ecccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeE-------------EEEE----cCCCCcEEEEEE--CCCE
Confidence 334567888999887 899999999999999999876532 1122 245778999999 7889
Q ss_pred EEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee---EEeeecccCeEEEe
Q 010759 228 LATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK---QQFEFHSGPTLDVD 303 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~---~~~~~~~~~~~~~~ 303 (502)
|++|+.||.|++|+.. +.....+.+|...|.+++|++ ++|++|+.|++|++||+.++... ..+..|...+.++.
T Consensus 186 l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 186 IITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEE
T ss_pred EEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEE
Confidence 9999999999999986 456678889999999999974 59999999999999999887655 56677888999999
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEE
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIY 383 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~ 383 (502)
+ +...+++++.|+.|++|++.+..++..+.+|...|.+++| ++.++++|+.||.|++||+++++++..+..|...|.
T Consensus 264 ~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~ 340 (435)
T 1p22_A 264 F-DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEGHEELVR 340 (435)
T ss_dssp E-ETTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECCCSSCEE
T ss_pred e-CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEE
Confidence 8 5667889999999999999999999999999999999999 468999999999999999999999999999999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe---------EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcE
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK---------LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM 454 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~---------~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i 454 (502)
+++| ++. +|++|+.||.|++||+.++. ++..+.+|..+|++++| ++.+|++|+.||.|
T Consensus 341 ~~~~--~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i 407 (435)
T 1p22_A 341 CIRF--DNK---------RIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTI 407 (435)
T ss_dssp EEEC--CSS---------EEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEE
T ss_pred EEEe--cCC---------EEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEE
Confidence 9998 332 78999999999999987665 88899999999999999 78899999999999
Q ss_pred EEEeCCCCeeEEEEecCCCEEEEEEC
Q 010759 455 HIWSLKEGKIVKTYTGNGGIFEVCWN 480 (502)
Q Consensus 455 ~iw~~~~~~~~~~~~~~~~i~~~~ws 480 (502)
++|++.+...............+.|.
T Consensus 408 ~iwd~~~~~~~~~~~~~~~~~~~~~~ 433 (435)
T 1p22_A 408 LIWDFLNDPAAQAEPPRSPSRTYTYI 433 (435)
T ss_dssp EEEC----------------------
T ss_pred EEEECCCCCCcccCCCCCCccceeee
Confidence 99999887665554444444555554
No 80
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=2.7e-36 Score=301.40 Aligned_cols=299 Identities=25% Similarity=0.467 Sum_probs=239.1
Q ss_pred cCCCceeeccccc----cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 142 IPNSDVTILEGHT----SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 142 ~~~~~~~~l~~H~----~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
+|..+..+|..-. --++.|+||++ ++||+| .|++|+|||+.++... ..+. ...|...|+
T Consensus 89 i~~~p~~~l~ap~~~~d~y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg~~~-------------~~~~--~~~~~~~V~ 151 (420)
T 4gga_A 89 IPSLPDRILDAPEIRNDYYLNLVDWSSG-NVLAVA-LDNSVYLWSASSGDIL-------------QLLQ--MEQPGEYIS 151 (420)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTT-SEEEEE-ETTEEEEEETTTCCEE-------------EEEE--CCSTTCCEE
T ss_pred cCCCCceEEECCCCcccccceeEEECCC-CEEEEE-eCCEEEEEECCCCCEE-------------EEEE--ecCCCCcEE
Confidence 4444445554321 13678999976 477766 5999999999876421 1111 124567899
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc-eeEEeeec
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFH 295 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~ 295 (502)
+++|+|+|++|++|+.||.|+||+... .....+.+|...|.++.|+ +..|++|+.|+.+++||..... .+..+..|
T Consensus 152 sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 152 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SYILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CCEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 999999999999999999999999864 5667889999999998875 5799999999999999987644 55677888
Q ss_pred ccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCc----ceeeecCCCcceeEEEEcCCCC-EEEE--EeCCCcEEEEeCC
Q 010759 296 SGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENR----PIKTFAGHQGEVNCVKWDPTGS-LLAS--CSDDVTAKIWNMK 367 (502)
Q Consensus 296 ~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~----~~~~~~~h~~~v~~v~~~p~~~-~l~s--gs~dg~i~iwd~~ 367 (502)
...+..+.+. ....+++++.|+.+++|+..... .+..+..|.+.|.+++|+|.+. ++++ |+.|++|++||+.
T Consensus 230 ~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~ 309 (420)
T 4gga_A 230 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 309 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT
T ss_pred ccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC
Confidence 8888888886 45677889999999999987654 4566778999999999999764 4554 4589999999999
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
++.++..+..+ ..+.++.|+|++. .+++++|+.||.|+|||+.+++++.++.+|..+|++|+|+|+|++|||
T Consensus 310 t~~~~~~~~~~-~~v~~~~~~~~~~-------~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S 381 (420)
T 4gga_A 310 SGACLSAVDAH-SQVCSILWSPHYK-------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 381 (420)
T ss_dssp TTEEEEEEECS-SCEEEEEEETTTT-------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred ccccceeeccc-cceeeeeecCCCC-------eEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99988877654 5788999999875 122333457999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCCeeEEE
Q 010759 448 GSLDKSMHIWSLKEGKIVKT 467 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~~ 467 (502)
||.|++|+||++.+....+.
T Consensus 382 ~s~D~tvriWdv~~~~~~~~ 401 (420)
T 4gga_A 382 AAADETLRLWRCFELDPARR 401 (420)
T ss_dssp EETTTEEEEECCSCSSCC--
T ss_pred EecCCeEEEEECCCCCccch
Confidence 99999999999976544333
No 81
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.7e-36 Score=306.85 Aligned_cols=269 Identities=28% Similarity=0.437 Sum_probs=242.0
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
+.++.+ ++.+|++|+.||.|++|+.. +.....+.+|.++|++++|+|++ +|++|+.||+|++||+.+++....+..
T Consensus 125 ~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~ 201 (464)
T 3v7d_B 125 ITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEG 201 (464)
T ss_dssp EEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred EEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECC
Confidence 566666 56799999999999999976 45667788999999999999988 999999999999999999999999999
Q ss_pred cccCeEEEecC---CCceEEEEcCCCeEEEEEcCCCcc-----------------------eeeecCCCcceeEEEEcCC
Q 010759 295 HSGPTLDVDWR---NNVSFATSSTDNMIYVCKIGENRP-----------------------IKTFAGHQGEVNCVKWDPT 348 (502)
Q Consensus 295 ~~~~~~~~~~~---~~~~~~~~~~d~~i~~~~~~~~~~-----------------------~~~~~~h~~~v~~v~~~p~ 348 (502)
|..++.++.+. +...+++++.|+.|++|++..... +..+.+|...+.++ +++
T Consensus 202 h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~ 279 (464)
T 3v7d_B 202 HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGH 279 (464)
T ss_dssp CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEE
T ss_pred CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCC
Confidence 99999988875 446789999999999999986542 44677888888877 578
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 349 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 349 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
++++++|+.||.|++||+.+++.+..+..|...|.+++|+|++. +|++|+.||.|++||+++++++..+.+
T Consensus 280 ~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~sg~~dg~i~vwd~~~~~~~~~~~~ 350 (464)
T 3v7d_B 280 GNIVVSGSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERK---------RCISASMDTTIRIWDLENGELMYTLQG 350 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTT---------EEEEEETTSCEEEEETTTTEEEEEECC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCC---------EEEEEeCCCcEEEEECCCCcEEEEEeC
Confidence 99999999999999999999999999999999999999999886 789999999999999999999999999
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 429 HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 429 h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|...|++++|+ +.+|++|+.||.|++||+.++.....+.....+..++|+|+|++|++|+ ++.|.|||++
T Consensus 351 h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~ 420 (464)
T 3v7d_B 351 HTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-ENQFNIYNLR 420 (464)
T ss_dssp CSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-TTEEEEEETT
T ss_pred CCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-CCeEEEEECC
Confidence 99999999997 5799999999999999999988777776666788899999999999999 8999999975
No 82
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=6e-36 Score=286.58 Aligned_cols=276 Identities=22% Similarity=0.457 Sum_probs=235.7
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEe--ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCT--LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~--~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
..+|+||+++ +|++| .|++|+|||... ..... +.+|...|++++|+|++++|++|+.|++|++||+.+++.+..+
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~ 105 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNM 105 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEe
Confidence 5679999986 66665 599999999864 44444 4578889999999999999999999999999999999999999
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
..|...+..+.+.. ..+++++.++.+++|+.... ..+..+.+|...+.++.+++++++|++++.|++|++||+.+++.
T Consensus 106 ~~h~~~~~~~~~~~-~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 184 (318)
T 4ggc_A 106 TSHSARVGSLSWNS-YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEG 184 (318)
T ss_dssp ECCSSCEEEEEEET-TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTT
T ss_pred cCccceEEEeecCC-CEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcc
Confidence 99998888777654 46788999999999998765 45667889999999999999999999999999999999987653
Q ss_pred ----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 372 ----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 372 ----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
......+...|..+.++|.+.. ...+++++.+++|++||........... +...+..+.|+|++..+++
T Consensus 185 ~~~~~~~~~~~~~~v~~~~~~~~~~~------~~~~~~~~~~~~i~lwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~ 257 (318)
T 4ggc_A 185 GWVPLQTFTQHQGAVKAVAWCPWQSN------VLATGGGTSDRHIRIWNVCSGACLSAVD-AHSQVCSILWSPHYKELIS 257 (318)
T ss_dssp BSCCSEEECCCCSCEEEEEECTTSTT------EEEEEECTTTCEEEEEETTTCCEEEEEE-CSSCEEEEEEETTTTEEEE
T ss_pred cccceeeecccCCceEEEEecCCCCc------EEEEEecCCCCEEEEEeccccccccccc-ceeeeeeeeecccccceEE
Confidence 3344567788999999987642 2245678889999999999888776655 6678999999999998887
Q ss_pred Ee--CCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 448 GS--LDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 448 gs--~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++ .|+.|+|||+.+++.+.++.++ +.|++++|+|+|++||+|+.|++|+|||+.
T Consensus 258 ~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~ 314 (318)
T 4ggc_A 258 GHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCF 314 (318)
T ss_dssp EECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCS
T ss_pred EEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECC
Confidence 65 7999999999999999999875 569999999999999999999999999985
No 83
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=8.1e-38 Score=312.08 Aligned_cols=284 Identities=13% Similarity=0.117 Sum_probs=239.3
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCcee-EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
.+++++|+|++++|++|+.||.|++|+...... ..+..| ..+....|+|++++|++|+.|+.|++||+.++.....+.
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~ 136 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQ 136 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETT
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecc
Confidence 356789999999999999999999999865332 233344 445555789999999999999999999999998888888
Q ss_pred ecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 294 FHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
.|...+.++.|.+ ...+++++.|+.|++|++...+.+..+.+|.+.|.+++|+|++++|++|+.||+|++||+++++.+
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTI 216 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEE
T ss_pred cccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCcee
Confidence 8999999999975 457889999999999999999999999999999999999999999999999999999999999988
Q ss_pred eeccc---CCCcEEEEEEccCCCC-------------CCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCEEE
Q 010759 373 HDLRE---HSKEIYTIRWSPTGSG-------------TNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYS 435 (502)
Q Consensus 373 ~~~~~---~~~~i~~~~~sp~g~~-------------~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~ 435 (502)
..+.. +...+.+++|.|.+.. ..+|+. .+|++|+.||.|++||+++++.+..+. +|...|++
T Consensus 217 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 295 (420)
T 3vl1_A 217 HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNS 295 (420)
T ss_dssp EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEE
T ss_pred EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCCcee
Confidence 87764 5667888888654321 123333 367899999999999999998877764 58889999
Q ss_pred EEECCCCC-EEEEEeCCCcEEEEeCCCCee-EEEEec--CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 436 LAFSPTGE-YLASGSLDKSMHIWSLKEGKI-VKTYTG--NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 436 l~~spdg~-~lasgs~Dg~i~iw~~~~~~~-~~~~~~--~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++|+|+++ +|++|+.||.|++||+++++. +..+.. ...+..+. .++|++|++++.|++|+||+++
T Consensus 296 ~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~-~~~~~~l~s~~~d~~v~iw~~~ 364 (420)
T 3vl1_A 296 LTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNVY-FAAGALFVSSGFDTSIKLDIIS 364 (420)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEEE-EETTEEEEEETTTEEEEEEEEC
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEEE-eCCCCEEEEecCCccEEEEecc
Confidence 99999998 999999999999999998754 566654 34566774 4688899999999999999975
No 84
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-36 Score=298.63 Aligned_cols=252 Identities=26% Similarity=0.420 Sum_probs=211.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC--
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE-- 224 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~-- 224 (502)
+.++.+|...|++++|+|++++||+|+.||.|+||++.... ...... ...|...|++++|+++
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~-----------~~~~~~----~~~h~~~v~~~~~~~~~~ 68 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLIDT----LTGHEGPVWRVDWAHPKF 68 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTE-----------EEEEEE----ECCCSSCEEEEEECCGGG
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCc-----------ceeeeE----ecCCCCcEEEEEeCCCCC
Confidence 45789999999999999999999999999999999986321 111122 2346788999999987
Q ss_pred CCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 225 GTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+.+|++|+.||.|++|+.... ....+..|...|++++|+|+ +.+|++++.|++|++||+++....
T Consensus 69 ~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~---------- 138 (379)
T 3jrp_A 69 GTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT---------- 138 (379)
T ss_dssp CSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC----------
T ss_pred CCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce----------
Confidence 999999999999999998754 55677889999999999999 999999999999999999765321
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-------------CCCEEEEEeCCCcEEEEeC
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-------------TGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-------------~~~~l~sgs~dg~i~iwd~ 366 (502)
....+.+|...|.+++|+| ++.+|++|+.||.|++||+
T Consensus 139 -----------------------------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 139 -----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp -----------------------------CEEEEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEE
T ss_pred -----------------------------eeEEecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEe
Confidence 1123456888899999999 6999999999999999999
Q ss_pred CCCc----eeeecccCCCcEEEEEEccC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-----EEEEeeCCCCCEE
Q 010759 367 KQDK----YVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILASASFDSTVKLWDVELGK-----LLYSLNGHREPVY 434 (502)
Q Consensus 367 ~~~~----~~~~~~~~~~~i~~~~~sp~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-----~~~~~~~h~~~v~ 434 (502)
+++. .+..+..|...|.+++|+|+ +. +|++++.||.|++||+..+. .+.....|...|+
T Consensus 190 ~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~---------~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~ 260 (379)
T 3jrp_A 190 NSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS---------YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLW 260 (379)
T ss_dssp ETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE---------EEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEE
T ss_pred cCCCcceeeEEEEecccCcEeEEEECCCCCCCC---------eEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEE
Confidence 7664 44677789999999999998 53 89999999999999998763 2223344889999
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 435 SLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 435 ~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
+++|+|+|++|++++.||.|++|++..
T Consensus 261 ~~~~s~~g~~l~~~~~dg~i~iw~~~~ 287 (379)
T 3jrp_A 261 RASWSLSGNVLALSGGDNKVTLWKENL 287 (379)
T ss_dssp EEEECSSSCCEEEEESSSSEEEEEEEE
T ss_pred EEEEcCCCCEEEEecCCCcEEEEeCCC
Confidence 999999999999999999999999874
No 85
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.2e-38 Score=318.22 Aligned_cols=295 Identities=12% Similarity=0.085 Sum_probs=220.7
Q ss_pred eeccccccceeEEEECCC------CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 148 TILEGHTSEVCACAWSPA------GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd------~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
.++.+|.+.|.+++|+|+ +.+||||+.||+|+||++.++...... .............|...|++++|
T Consensus 201 ~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~------~~~~~~p~~~l~~h~~~v~sv~~ 274 (524)
T 2j04_B 201 QTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHV------FKMCEKPSLTLSLADSLITTFDF 274 (524)
T ss_dssp EEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSE------EECCCSCSEEECCTTTCEEEEEE
T ss_pred EEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccc------ceeecCceEEEEcCCCCEEEEEe
Confidence 346778899999999997 579999999999999999765422100 00000000112345788999999
Q ss_pred CCCCCEEEEEECCCcEEEEECCC--ceeEeecCCCCCEEEE--EecCCC-CEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 222 NGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSL--KWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l--~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+++ .+|++|+.||+|++||+.. .....+.+|..+|++| .|+|++ ++|+|||.|++|+|||+++++....+..|.
T Consensus 275 s~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~ 353 (524)
T 2j04_B 275 LSP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRF 353 (524)
T ss_dssp SSS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEEC
T ss_pred cCC-CeEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccc
Confidence 986 4899999999999999874 2345688999999999 678887 899999999999999999988776666665
Q ss_pred c--CeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee
Q 010759 297 G--PTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH 373 (502)
Q Consensus 297 ~--~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~ 373 (502)
. .+.++.|.+ ...+++++.|++|++|+++....+..+.+|.+.|++|+|+|+|++|++|+.||+|++||+..+ .+.
T Consensus 354 ~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~ 432 (524)
T 2j04_B 354 RGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLH 432 (524)
T ss_dssp SCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTT
T ss_pred ccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hcc
Confidence 3 466788866 456888899999999999998888888999999999999999999999999999999998654 322
Q ss_pred eccc-----CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEEEEECCCC---CE
Q 010759 374 DLRE-----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSPTG---EY 444 (502)
Q Consensus 374 ~~~~-----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spdg---~~ 444 (502)
.++. +...+++++|+|++. .+ ... + .+++|+.. ++.++..+.+|..+|++|+|+|++ .+
T Consensus 433 ~~~~~~~~~~~~~v~~v~~sp~g~---------~~-~~~-~-~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~ 500 (524)
T 2j04_B 433 GIKNSSATQKSLRLWKWDYSIKDD---------KY-RID-S-SYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKC 500 (524)
T ss_dssp CC------CCCCEEEECBCCSSSC---------EE-EEC-C-CCCCCC-------------CCCSCCCEEECCSTTTTTE
T ss_pred ccccCccceeeeEEEEeccCCCCC---------eE-Ecc-C-CceecccccCCcceeeecCCCceEEEEECCCCCCccHH
Confidence 2211 112477899999875 22 222 2 34455443 567788899999999999999996 49
Q ss_pred EEEEeCCCcEEEEeCCCC
Q 010759 445 LASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~~~ 462 (502)
||+|+.||.|+||++...
T Consensus 501 lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 501 YAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EEEECTTSEEEEEECSCC
T ss_pred HHhhccCceEEEEEcccc
Confidence 999999999999998743
No 86
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-36 Score=303.25 Aligned_cols=268 Identities=29% Similarity=0.537 Sum_probs=240.4
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
+...|.+++| ++++|++|+.||.|++|+.. +.....+.+|.++|++++| ++++|++|+.||+|++||+.+++...
T Consensus 132 ~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~ 207 (435)
T 1p22_A 132 TSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN 207 (435)
T ss_dssp SCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE
T ss_pred CCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE
Confidence 4567888887 78999999999999999986 4566788899999999999 67899999999999999999999999
Q ss_pred EeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcce---eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 291 QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPI---KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~---~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
.+..|...+.++.|.+ ..+++++.|+.|++|++.....+ ..+.+|...|.+++| ++++|++|+.||.|++||++
T Consensus 208 ~~~~h~~~v~~l~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 208 TLIHHCEAVLHLRFNN-GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EECCCCSCEEEEECCT-TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EEcCCCCcEEEEEEcC-CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 9999999999999974 47899999999999999887655 677899999999999 78899999999999999999
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
+++.+..+..|...+.++.|++ . ++++|+.||.|++||+++++++..+.+|...|++++| ++.+|++
T Consensus 285 ~~~~~~~~~~~~~~v~~~~~~~--~---------~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s 351 (435)
T 1p22_A 285 TCEFVRTLNGHKRGIACLQYRD--R---------LVVSGSSDNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVS 351 (435)
T ss_dssp TCCEEEEEECCSSCEEEEEEET--T---------EEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEE
T ss_pred cCcEEEEEcCCCCcEEEEEeCC--C---------EEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEE
Confidence 9999999999999999999853 2 7899999999999999999999999999999999999 7889999
Q ss_pred EeCCCcEEEEeCCCCe---------eEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 448 GSLDKSMHIWSLKEGK---------IVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~---------~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+.||.|++||+.++. .+..+.++ +.|.+++| ++++|++|+.||+|+|||+.
T Consensus 352 g~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd~~ 413 (435)
T 1p22_A 352 GAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIVSSSHDDTILIWDFL 413 (435)
T ss_dssp EETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEEECCSSSEEEEEC--
T ss_pred EeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEEEEeCCCEEEEEECC
Confidence 9999999999997665 66777654 56899999 78999999999999999985
No 87
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2e-35 Score=282.92 Aligned_cols=294 Identities=24% Similarity=0.443 Sum_probs=234.2
Q ss_pred cCCCceeeccc--ccc--ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 142 IPNSDVTILEG--HTS--EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 142 ~~~~~~~~l~~--H~~--~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
+|..+.++|.. ... -.++|+||+++ +||+| .|++|+|||+.++... +.+. ...|...|+
T Consensus 9 ~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~-------------~~~~--~~~~~~~V~ 71 (318)
T 4ggc_A 9 IPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDIL-------------QLLQ--MEQPGEYIS 71 (318)
T ss_dssp CCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEE-------------EEEE--CCSTTCCEE
T ss_pred cCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEE-------------EEEE--ecCCCCeEE
Confidence 44444455542 222 25789999986 66665 5999999999876521 1111 234567899
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc-eeEEeeec
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE-WKQQFEFH 295 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~ 295 (502)
+++|+|++++|++|+.||.|++|+... .....+.+|...+.++.+ .+..+++|+.++.+++|+..+.. ....+..|
T Consensus 72 ~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (318)
T 4ggc_A 72 SVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSYILSSGSRSGHIHHHDVRVAEHHVATLSGH 149 (318)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCCEEEEEecCCceEeeecCCCceeEEEEcCc
Confidence 999999999999999999999999864 556678899998887655 56799999999999999987654 45667788
Q ss_pred ccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcc----eeeecCCCcceeEEEEcCCCCE---EEEEeCCCcEEEEeCC
Q 010759 296 SGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRP----IKTFAGHQGEVNCVKWDPTGSL---LASCSDDVTAKIWNMK 367 (502)
Q Consensus 296 ~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~----~~~~~~h~~~v~~v~~~p~~~~---l~sgs~dg~i~iwd~~ 367 (502)
...+..+.+. ....+++++.|+.|++|++..++. ......|.+.|.+++++|++.. +++++.+++|++||..
T Consensus 150 ~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~ 229 (318)
T 4ggc_A 150 SQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC 229 (318)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETT
T ss_pred cCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecc
Confidence 8888888775 456788999999999999986543 3455678889999999998753 3567789999999998
Q ss_pred CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 368 QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
........ .+...+..+.|+|.+. .+++++|+.|+.|++||+++++++.++.+|..+|++|+|+|+|++|||
T Consensus 230 ~~~~~~~~-~~~~~v~~~~~~~~~~-------~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S 301 (318)
T 4ggc_A 230 SGACLSAV-DAHSQVCSILWSPHYK-------ELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVAS 301 (318)
T ss_dssp TCCEEEEE-ECSSCEEEEEEETTTT-------EEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEE
T ss_pred cccccccc-cceeeeeeeeeccccc-------ceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 87766544 4667899999999875 233445568999999999999999999999999999999999999999
Q ss_pred EeCCCcEEEEeCCCC
Q 010759 448 GSLDKSMHIWSLKEG 462 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~ 462 (502)
||.||+|+||++.+.
T Consensus 302 ~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 302 AAADETLRLWRCFEL 316 (318)
T ss_dssp EETTTEEEEECCSCC
T ss_pred EecCCeEEEEECCCC
Confidence 999999999998754
No 88
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.6e-38 Score=313.91 Aligned_cols=300 Identities=12% Similarity=0.134 Sum_probs=240.1
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEee-------------e---cccccCCCC
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHV-------------K---GRTNEKSKD 215 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~-------------~---~~~~~~~~~ 215 (502)
.-..+|.+++|||||+++||||.|++|+ +...+.... .++..+..+... . .....+...
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~---gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~ 87 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDIN---CNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCY 87 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCS---SBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCC
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--cccccceec---CCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCc
Confidence 3457899999999999999999999999 655444331 222222222110 0 011134678
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCC-----CEEEEEecCCCCEEEEecCCCeEEEEeccCcce--
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKG-----PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW-- 288 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~-----~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~-- 288 (502)
|.+++|||+|.+|++++.||.|++|+..+ +...+. |.. .|.+++|+|+|++|++|+.||+|++||+.++..
T Consensus 88 V~~vawSPdG~~LAs~s~dg~V~iwd~~~-~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~ 165 (588)
T 2j04_A 88 PRVCKPSPIDDWMAVLSNNGNVSVFKDNK-MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENT 165 (588)
T ss_dssp EEEEEECSSSSCEEEEETTSCEEEEETTE-EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTC
T ss_pred EEEEEECCCCCEEEEEeCCCcEEEEeCCc-eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccc
Confidence 99999999999999999999999999765 555566 665 499999999999999999999999999998753
Q ss_pred -----eEEe----eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc---eeee-cCCCcceeEEEEcCCCCEEEEE
Q 010759 289 -----KQQF----EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP---IKTF-AGHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 289 -----~~~~----~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~---~~~~-~~h~~~v~~v~~~p~~~~l~sg 355 (502)
+.++ ..|...|.+++|.++. +++++.|+++++|++..+.. ...+ .+|...|.+++|+ |+.||++
T Consensus 166 ~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~~LASa 242 (588)
T 2j04_A 166 PEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DYKVVLT 242 (588)
T ss_dssp CCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TTEEEEE
T ss_pred ccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CCEEEEE
Confidence 4555 4456789999999888 99999999999999988763 3456 4888999999999 6899988
Q ss_pred eCCCcEEEEeCCCCceeeecccCCCcEEEEEE--ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCE
Q 010759 356 SDDVTAKIWNMKQDKYVHDLREHSKEIYTIRW--SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPV 433 (502)
Q Consensus 356 s~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~--sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v 433 (502)
+ +++|++||+.+++......+|...++.++| +|++. .|++++.||+ ++|...
T Consensus 243 ~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~---------~La~a~edG~-klw~~d--------------- 296 (588)
T 2j04_A 243 C-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKEST---------ILLMSNKTSY-KVLLED--------------- 296 (588)
T ss_dssp C-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCE---------EEEECSSCEE-EEEESS---------------
T ss_pred e-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCC---------EEEEEcCCCC-EEEeec---------------
Confidence 7 699999999988774444479999999999 88875 7899999999 999876
Q ss_pred EEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC
Q 010759 434 YSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 434 ~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~ 491 (502)
.++|+|++..+++. |+++++|+...+. +..+.+...|++++|||||+.+|+++.
T Consensus 297 -~~~~spd~~l~a~~--d~~v~lW~~~g~~-l~~~~~~~~I~~va~SPdG~~lA~~~~ 350 (588)
T 2j04_A 297 -ELHVTADNIIAPYL--EKKFKKWSTIWNE-FNNYETTLVIHGISLSPDGYSIAIVYD 350 (588)
T ss_dssp -SEEEECCCSSHHHH--HHHHHHTTTTTTS-SSSSCCEEEEEEEEECTTSSEEEEEEE
T ss_pred -cEEECCCceEEEEc--CCEEEEEECCCCc-eeeeccceEEEEEEECCCCCEEEEEEe
Confidence 26699999988875 9999999975444 445555556999999999999998864
No 89
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-36 Score=297.26 Aligned_cols=276 Identities=14% Similarity=0.168 Sum_probs=216.8
Q ss_pred CCCeEEEEECCCCCEEEEEECCC-------cEEEEECCCce-----------eEeecCCCCCEEEEEecCCCCEEEEe--
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDG-------QARIWSTNGDL-----------KCTLSKHKGPIFSLKWNKKGDYLLTG-- 272 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg-------~i~iw~~~~~~-----------~~~~~~h~~~V~~l~~~~~~~~l~sg-- 272 (502)
..||++++|+|++++|++||.+. .|++|++.... ...+.+|...|.+++++ ++.+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~--~~~~~~g~~ 91 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDAS--KGIILVGCN 91 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEE--TTEEEEECC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeC--CCEEEEEEC
Confidence 45899999999999999998643 59999975321 12467888888888765 4566654
Q ss_pred ---------cCCCeEEEEeccCcceeEEee----e-----cccCeEEEecCCCc-eE--EEEcCCCeEEEEEcCCCccee
Q 010759 273 ---------SCDKTAIVWDVKTEEWKQQFE----F-----HSGPTLDVDWRNNV-SF--ATSSTDNMIYVCKIGENRPIK 331 (502)
Q Consensus 273 ---------s~D~~v~iwd~~~~~~~~~~~----~-----~~~~~~~~~~~~~~-~~--~~~~~d~~i~~~~~~~~~~~~ 331 (502)
+.|+++++|++.+......+. . +...+..+.|.++. .+ ++++.|++|++|++.+..++.
T Consensus 92 ~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~ 171 (365)
T 4h5i_A 92 ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKF 171 (365)
T ss_dssp CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEE
T ss_pred CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEE
Confidence 457889999986654222111 1 11235567776543 33 345578999999999998887
Q ss_pred eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 332 TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 332 ~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
.+. |.+.|.+++|+|+|+++++++.+ .+++|+..++..+. ....|...+.+++|+|++. ++++++.|
T Consensus 172 ~~~-~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~---------~l~~~s~d 240 (365)
T 4h5i_A 172 EIE-TRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARKTDFDKNWSLSKINFIADDT---------VLIAASLK 240 (365)
T ss_dssp EEE-CSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTE---------EEEEEEES
T ss_pred EeC-CCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCC---------EEEEEecC
Confidence 775 77889999999999999999865 56666666666543 3456888899999999986 78888877
Q ss_pred C----eEEEEeCCCCeE----EEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ec-CCCEEEEEE
Q 010759 410 S----TVKLWDVELGKL----LYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TG-NGGIFEVCW 479 (502)
Q Consensus 410 g----~i~iwd~~~~~~----~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~-~~~i~~~~w 479 (502)
+ .+++|++..... ...+.+|..+|++++|||+|++||+|+.|++|+|||+.+++.+.++ .+ ...|++++|
T Consensus 241 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~f 320 (365)
T 4h5i_A 241 KGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTI 320 (365)
T ss_dssp SSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEE
T ss_pred CcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEE
Confidence 7 688999876653 3567889999999999999999999999999999999999999886 44 457999999
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010759 480 NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~~~ 501 (502)
||||++||+|+.|++|+||++.
T Consensus 321 Spdg~~laS~S~D~tvrvw~ip 342 (365)
T 4h5i_A 321 SPDSTYVASVSAANTIHIIKLP 342 (365)
T ss_dssp CTTSCEEEEEETTSEEEEEECC
T ss_pred CCCCCEEEEEeCCCeEEEEEcC
Confidence 9999999999999999999984
No 90
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.8e-35 Score=297.67 Aligned_cols=280 Identities=24% Similarity=0.442 Sum_probs=248.0
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
..+..+.+|...|.+++|+ +.+|++|+.||+|++||+.++.. ...+ ..|...|.+++|+
T Consensus 150 ~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~-------------~~~~----~~h~~~v~~~~~~-- 208 (445)
T 2ovr_B 150 KCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGEC-------------IHTL----YGHTSTVRCMHLH-- 208 (445)
T ss_dssp CEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEE-------------EEEE----CCCSSCEEEEEEE--
T ss_pred cEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcE-------------EEEE----CCCCCcEEEEEec--
Confidence 3467788999999999997 67999999999999999876531 1122 2456789999995
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
+.++++|+.||.|++|+.. +.....+.+|..+|.+++| ++++|++|+.|+.|++||+++++....+..|...+.++.
T Consensus 209 ~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~ 286 (445)
T 2ovr_B 209 EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQ 286 (445)
T ss_dssp TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEE
Confidence 5789999999999999986 4566788899999999999 678999999999999999999999999999999999999
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc---CCC
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE---HSK 380 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---~~~ 380 (502)
| +...+++++.|+.|++|++..++++..+.+|...+.++.++ +.++++|+.||.|++||+++++.+..+.. |..
T Consensus 287 ~-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~ 363 (445)
T 2ovr_B 287 F-DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQS 363 (445)
T ss_dssp E-CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSS
T ss_pred E-CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCC
Confidence 9 66778999999999999999999999999999999888874 67999999999999999999998888876 888
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-----eCCCCCEEEEEECCCCCEEEEEeCCCc--
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-----NGHREPVYSLAFSPTGEYLASGSLDKS-- 453 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~v~~l~~spdg~~lasgs~Dg~-- 453 (502)
.|.+++|++. +|++|+.||.|++||+.+++.+..+ .+|...|++++|+|++.+||+|+.||+
T Consensus 364 ~v~~~~~~~~-----------~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~ 432 (445)
T 2ovr_B 364 AVTCLQFNKN-----------FVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEE 432 (445)
T ss_dssp CEEEEEECSS-----------EEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSC
T ss_pred CEEEEEECCC-----------EEEEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCc
Confidence 9999999642 7899999999999999999998887 468889999999999999999999998
Q ss_pred --EEEEeCCC
Q 010759 454 --MHIWSLKE 461 (502)
Q Consensus 454 --i~iw~~~~ 461 (502)
|.|||+..
T Consensus 433 ~~l~v~df~~ 442 (445)
T 2ovr_B 433 TKLLVLDFDV 442 (445)
T ss_dssp CEEEEEECCC
T ss_pred cEEEEEECCC
Confidence 99999874
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=1.5e-36 Score=294.07 Aligned_cols=269 Identities=14% Similarity=0.193 Sum_probs=237.3
Q ss_pred cCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCce----eEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEec-c
Q 010759 211 EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDL----KCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDV-K 284 (502)
Q Consensus 211 ~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~----~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~-~ 284 (502)
+|...|++++|+|++.+|++|+.||.|++|+..... ...+..|..+|++++|+|+++ +|++|+.|+.|++||+ .
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~ 88 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIG 88 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSS
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEecc
Confidence 567889999999999999999999999999986543 455668999999999999999 9999999999999999 8
Q ss_pred CcceeEEeee--cccCeEEEecCCCceEEEEcCCCeEEEEEcCC---------CcceeeecCCCcceeEEEEcCCCCEEE
Q 010759 285 TEEWKQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---------NRPIKTFAGHQGEVNCVKWDPTGSLLA 353 (502)
Q Consensus 285 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---------~~~~~~~~~h~~~v~~v~~~p~~~~l~ 353 (502)
++.. ..+.. |...+.++.|.....+++++.|+.|++|++.. .+++..+. |...|.+++|+|++ ++
T Consensus 89 ~~~~-~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~ 164 (342)
T 1yfq_A 89 SPSF-QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LI 164 (342)
T ss_dssp SSSE-EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EE
T ss_pred CCce-EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EE
Confidence 7765 56667 88899999986677889999999999999987 67676666 88999999999987 89
Q ss_pred EEeCCCcEEEEeCCC-Cce--eeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------eEE
Q 010759 354 SCSDDVTAKIWNMKQ-DKY--VHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVELG------KLL 423 (502)
Q Consensus 354 sgs~dg~i~iwd~~~-~~~--~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------~~~ 423 (502)
+++.|+.|++||+++ +.. ......|...+.+++|+| ++. ++++|+.||.|++|+++.. +.+
T Consensus 165 ~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~---------~l~~~~~dg~i~i~~~~~~~~~~~~~~~ 235 (342)
T 1yfq_A 165 VGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE---------GYACSSIDGRVAVEFFDDQGDDYNSSKR 235 (342)
T ss_dssp EEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC---------EEEEEETTSEEEEEECCTTCCSTTCTTC
T ss_pred EEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC---------EEEEEecCCcEEEEEEcCCCcccccccc
Confidence 999999999999987 442 334456788999999999 875 7899999999999999876 777
Q ss_pred EEeeCCCC---------CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEECC
Q 010759 424 YSLNGHRE---------PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 424 ~~~~~h~~---------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~~~ 492 (502)
..+.+|.. +|++++|+|++++|++|+.||.|++||+.+++.+..+.++ ..|.+++ |+|++||+|+.|
T Consensus 236 ~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s~D 313 (342)
T 1yfq_A 236 FAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLATSD 313 (342)
T ss_dssp EEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEEEC
T ss_pred eeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEecC
Confidence 88888865 9999999999999999999999999999999999988764 5688998 999999999999
Q ss_pred Ce
Q 010759 493 HT 494 (502)
Q Consensus 493 ~~ 494 (502)
|+
T Consensus 314 g~ 315 (342)
T 1yfq_A 314 DT 315 (342)
T ss_dssp TH
T ss_pred Cc
Confidence 98
No 92
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.8e-35 Score=283.14 Aligned_cols=247 Identities=28% Similarity=0.558 Sum_probs=224.0
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEc
Q 010759 246 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKI 324 (502)
Q Consensus 246 ~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~ 324 (502)
....+.+|..+|++++|+|++++|++|+.|+.|++|++.+++....+..|...+.++.|.+ ...+++++.|+.|++|++
T Consensus 15 ~~~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 15 LKFTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 4557789999999999999999999999999999999999999999999999999999965 467889999999999999
Q ss_pred CCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 325 GENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 325 ~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
...+.+..+.+|...|.+++|+|++++|++|+.|+.|++||+++++.+..+..|..+|.+++|+|++. +|+
T Consensus 95 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~ 165 (312)
T 4ery_A 95 SSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGS---------LIV 165 (312)
T ss_dssp TTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS---------EEE
T ss_pred CCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCC---------EEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999886 789
Q ss_pred EEeCCCeEEEEeCCCCeEEEEee-CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCC----EEEEEE
Q 010759 405 SASFDSTVKLWDVELGKLLYSLN-GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGG----IFEVCW 479 (502)
Q Consensus 405 sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~----i~~~~w 479 (502)
+|+.||.|++||+++++.+..+. .+..+|..++|+|++++|++++.||.|++||+.+++.+..+.++.. +.....
T Consensus 166 ~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (312)
T 4ery_A 166 SSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFS 245 (312)
T ss_dssp EEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEE
T ss_pred EEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEE
Confidence 99999999999999998887764 4667899999999999999999999999999999999888876432 333334
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010759 480 NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+++.+|++|+.|+.|+|||++
T Consensus 246 ~~~~~~l~sg~~dg~i~vwd~~ 267 (312)
T 4ery_A 246 VTGGKWIVSGSEDNLVYIWNLQ 267 (312)
T ss_dssp CSSSCEEEECCTTSCEEEEETT
T ss_pred eCCCcEEEEECCCCEEEEEECC
Confidence 5788999999999999999975
No 93
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.7e-35 Score=294.52 Aligned_cols=300 Identities=13% Similarity=0.057 Sum_probs=232.0
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCC---CCCCCCCCCc------e---------EEE-------EE-----
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGT---SNGGAQNGPL------N---------VLV-------LK----- 203 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~---~~~~~~~~~~------~---------~~~-------~~----- 203 (502)
..+|++++|+|+|++|+++ .++.|++||+.++. .......... . ... .+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 3578999999999977766 57899999998876 2111000000 0 000 00
Q ss_pred ----------eeecccccCCCCeEEEEECCCCCEE-EEEECCCcEEEEECC--C-ceeEeec--CCCCCEEEEEecCCCC
Q 010759 204 ----------HVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTN--G-DLKCTLS--KHKGPIFSLKWNKKGD 267 (502)
Q Consensus 204 ----------~~~~~~~~~~~~V~~l~~s~~~~~l-~sg~~dg~i~iw~~~--~-~~~~~~~--~h~~~V~~l~~~~~~~ 267 (502)
........+...|.+++|+|++++| ++|+.||.|+||++. . .....+. .|...|++++|+|++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~ 162 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDT 162 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSS
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCC
Confidence 0000112345579999999999996 899999999999976 3 4445554 6778999999999999
Q ss_pred EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC
Q 010759 268 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP 347 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p 347 (502)
+|++|+.|+.|++|++.++.... .++..+.+|.+.|.+++|+|
T Consensus 163 ~l~~~~~~g~v~~~~~~~~~~~~-------------------------------------~~~~~~~~h~~~v~~~~~sp 205 (450)
T 2vdu_B 163 TVIIADKFGDVYSIDINSIPEEK-------------------------------------FTQEPILGHVSMLTDVHLIK 205 (450)
T ss_dssp EEEEEETTSEEEEEETTSCCCSS-------------------------------------CCCCCSEECSSCEEEEEEEE
T ss_pred EEEEEeCCCcEEEEecCCccccc-------------------------------------ccceeeecccCceEEEEEcC
Confidence 99999999999999987654211 02235567889999999999
Q ss_pred C---CCEEEEEeCCCcEEEEeCCCCceeee-cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE
Q 010759 348 T---GSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL 423 (502)
Q Consensus 348 ~---~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~ 423 (502)
+ +++|++|+.|++|++||+.++..+.. +.+|...|.+++|+ ++. +|++|+.|+.|++||+.+++++
T Consensus 206 ~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~---------~l~s~~~d~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 206 DSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDY---------LLLSAGGDDKIFAWDWKTGKNL 275 (450)
T ss_dssp CTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STT---------EEEEEESSSEEEEEETTTCCEE
T ss_pred CCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCC---------EEEEEeCCCeEEEEECCCCcEe
Confidence 9 99999999999999999999888877 56899999999999 775 7899999999999999999988
Q ss_pred EEeeC-------------------------CCCCEEEEEECCCCCEEEEEe-CCCcEEEEeC--CCC---eeEEEEecCC
Q 010759 424 YSLNG-------------------------HREPVYSLAFSPTGEYLASGS-LDKSMHIWSL--KEG---KIVKTYTGNG 472 (502)
Q Consensus 424 ~~~~~-------------------------h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~--~~~---~~~~~~~~~~ 472 (502)
..+.. +...|.+|+|+|++++|++++ .|+.|+||++ .++ +.+..+..++
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~ 355 (450)
T 2vdu_B 276 STFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPY 355 (450)
T ss_dssp EEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSS
T ss_pred eeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCC
Confidence 88763 235799999999999999999 8999999999 555 6677787778
Q ss_pred CEEEEEECCCCCEEEEEEC------CCeEEEEEee
Q 010759 473 GIFEVCWNKEGDKIAACFA------NHTVCVLDFR 501 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~------~~~v~v~~~~ 501 (502)
.+.+++|+|++.+++++.. +..|.||.++
T Consensus 356 ~v~~~~~~~~~~~v~~~~~~~~~~~~~~i~v~~~~ 390 (450)
T 2vdu_B 356 NVISLSAHNDEFQVTLDNKESSGVQKNFAKFIEYN 390 (450)
T ss_dssp CEEEEEEETTEEEEEECCTTCCSSCCCSEEEEEEE
T ss_pred ceEEEEecCCcEEEEEecccCCCCCCcceEEEEEE
Confidence 8999999996544444343 4457888764
No 94
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.1e-35 Score=290.70 Aligned_cols=281 Identities=16% Similarity=0.295 Sum_probs=233.2
Q ss_pred cCCCCeEEEEECC-CCCEEEEEECCCcEEEEECCCcee-Eee-------------cCCCCCEEEEEecC-CCCEEEEecC
Q 010759 211 EKSKDVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLK-CTL-------------SKHKGPIFSLKWNK-KGDYLLTGSC 274 (502)
Q Consensus 211 ~~~~~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~-~~~-------------~~h~~~V~~l~~~~-~~~~l~sgs~ 274 (502)
.|...|++++|+| ++++|++|+.||.|++|+...... ..+ .+|..+|++++|+| ++.+|++++.
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~ 120 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSF 120 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEET
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeC
Confidence 4678999999999 999999999999999999864321 111 25999999999999 7789999999
Q ss_pred CCeEEEEeccCcceeEEeeecccCeEEEecCC----CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN----NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS 350 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 350 (502)
|+.|++||+.+++....+. +...+..+.+.. ...+++++.++.|++|++....++..+.+|.+.|.+++|+|++.
T Consensus 121 d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~ 199 (408)
T 4a11_B 121 DKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYD 199 (408)
T ss_dssp TSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCT
T ss_pred CCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCC
Confidence 9999999999998877766 455666666642 34788999999999999999999999999999999999999998
Q ss_pred -EEEEEeCCCcEEEEeCCCCc-eeeec---------------ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 351 -LLASCSDDVTAKIWNMKQDK-YVHDL---------------REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 351 -~l~sgs~dg~i~iwd~~~~~-~~~~~---------------~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
+|++|+.||.|++||+++.. .+..+ ..|...|.+++|+|++. +|++++.||.|+
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---------~l~~~~~dg~i~ 270 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGL---------HLLTVGTDNRMR 270 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSS---------EEEEEETTSCEE
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCC---------EEEEecCCCeEE
Confidence 58999999999999998765 23333 56888999999999886 789999999999
Q ss_pred EEeCCCCeEEEEeeCCC-----CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEE
Q 010759 414 LWDVELGKLLYSLNGHR-----EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIA 487 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la 487 (502)
+||+.+++....+.++. ..+........+..+++++.|+.|++|++.+++.+..+.++ ..|.+++|+|+|++||
T Consensus 271 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~ 350 (408)
T 4a11_B 271 LWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELY 350 (408)
T ss_dssp EEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEE
Confidence 99999887655443321 12222222334566777788999999999999999998864 5699999999999999
Q ss_pred EEECCCeEEEEEee
Q 010759 488 ACFANHTVCVLDFR 501 (502)
Q Consensus 488 ~~~~~~~v~v~~~~ 501 (502)
+|+.||.|+|||++
T Consensus 351 s~~~dg~i~iw~~~ 364 (408)
T 4a11_B 351 SGSRDCNILAWVPS 364 (408)
T ss_dssp EEETTSCEEEEEEC
T ss_pred EECCCCeEEEEeCC
Confidence 99999999999986
No 95
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=2.5e-35 Score=313.35 Aligned_cols=244 Identities=26% Similarity=0.404 Sum_probs=213.9
Q ss_pred cccCCCCeEEEEECCCC-CEEEEEECCCcEEEEECCC------ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEE
Q 010759 209 TNEKSKDVTTLDWNGEG-TLLATGSYDGQARIWSTNG------DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVW 281 (502)
Q Consensus 209 ~~~~~~~V~~l~~s~~~-~~l~sg~~dg~i~iw~~~~------~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iw 281 (502)
...|...|++++|++++ .+|+||+.|++|++|++.. .....+.+|...|.+++|+|++++|++|+.|++|++|
T Consensus 378 l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vw 457 (694)
T 3dm0_A 378 MRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLW 457 (694)
T ss_dssp EECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred cccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEE
Confidence 34678999999999864 7999999999999999753 2345688999999999999999999999999999999
Q ss_pred eccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 282 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 282 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
|+.++.. +..+.+|...|.+++|+|++++|++|+.|++|
T Consensus 458 d~~~~~~-----------------------------------------~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i 496 (694)
T 3dm0_A 458 DLAAGVS-----------------------------------------TRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI 496 (694)
T ss_dssp ETTTTEE-----------------------------------------EEEEECCSSCEEEEEECTTSSCEEEEETTSCE
T ss_pred ECCCCcc-----------------------------------------eeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 9987643 23456789999999999999999999999999
Q ss_pred EEEeCCCCceeee---cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE
Q 010759 362 KIWNMKQDKYVHD---LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 362 ~iwd~~~~~~~~~---~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~ 438 (502)
++||......... ...|...|.+++|+|++.. .+|++|+.|++|++||++++++...+.+|...|++++|
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-------~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~ 569 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ-------PTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAV 569 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS-------CEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc-------ceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 9999865543322 2468888999999998631 27899999999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+|+|++|++|+.||.|++||+.+++.+..+..+..|.+++|+|++.+|+++.. +.|+|||++
T Consensus 570 spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-~~i~iwd~~ 631 (694)
T 3dm0_A 570 SPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATE-HGIKIWDLE 631 (694)
T ss_dssp CTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEET-TEEEEEETT
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcC-CCEEEEECC
Confidence 99999999999999999999999999888888888999999999998888765 569999975
No 96
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.8e-35 Score=286.76 Aligned_cols=241 Identities=20% Similarity=0.381 Sum_probs=213.7
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcce
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 288 (502)
|..+|++++|+|++++|++|+.|+.|++|+.... ....+.+|...|.+++|+|++++|++++.|++|++||+.++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~ 86 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTW 86 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEE
T ss_pred cCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCee
Confidence 5678999999999999999999999999998765 6678889999999999999999999999999999999977653
Q ss_pred eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC
Q 010759 289 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
... ..+.+|...|.+++|+|++++|++|+.|+.|++||+..
T Consensus 87 ~~~---------------------------------------~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~ 127 (372)
T 1k8k_C 87 KPT---------------------------------------LVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQ 127 (372)
T ss_dssp EEE---------------------------------------EECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEET
T ss_pred eee---------------------------------------EEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecC
Confidence 221 12346788899999999999999999999999999987
Q ss_pred Cce----eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC------------------CCCeEEEEe
Q 010759 369 DKY----VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV------------------ELGKLLYSL 426 (502)
Q Consensus 369 ~~~----~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~------------------~~~~~~~~~ 426 (502)
+.. ......|...|.+++|+|++. +|++|+.||.|++||+ ..++.+..+
T Consensus 128 ~~~~~~~~~~~~~~~~~i~~~~~~~~~~---------~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (372)
T 1k8k_C 128 ENDWWVCKHIKKPIRSTVLSLDWHPNSV---------LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES 198 (372)
T ss_dssp TTTEEEEEEECTTCCSCEEEEEECTTSS---------EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC
T ss_pred CCcceeeeeeecccCCCeeEEEEcCCCC---------EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec
Confidence 762 233356789999999999875 7899999999999995 467889999
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+|...|++++|+|++++|++++.||.|++||+.+++.+..+..+ ..|.+++|+|+|++|++| .|+.|.||+++
T Consensus 199 ~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 199 SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEcc
Confidence 999999999999999999999999999999999999998888765 479999999999988888 89999999986
No 97
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=4.5e-36 Score=301.25 Aligned_cols=265 Identities=20% Similarity=0.291 Sum_probs=202.7
Q ss_pred eeeccccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
+..+.+|.+.|++|+|+| ++.+|+|||.||+|+|||+.++.. ..+. ....+...+.+++|+|++
T Consensus 157 ~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~--------------~~~~-~~~~~~~~~~~~~~~~~~ 221 (435)
T 4e54_B 157 FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL--------------RVFA-SSDTINIWFCSLDVSASS 221 (435)
T ss_dssp EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE--------------EEEE-CCSSCSCCCCCEEEETTT
T ss_pred EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce--------------eEEe-ccCCCCccEEEEEECCCC
Confidence 345679999999999998 689999999999999999865321 1111 112234568899999999
Q ss_pred CEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 226 TLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
.+|++|+.||.|++|++.+.....+.+|...|++++|+|++. +|++|+.|++|++||+++.....
T Consensus 222 ~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~-------------- 287 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKA-------------- 287 (435)
T ss_dssp TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSS--------------
T ss_pred CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccc--------------
Confidence 999999999999999998888888899999999999999886 68899999999999998754211
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC----
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK---- 380 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~---- 380 (502)
.+....+|...|.+++|+|+|.+|++|+.||+|+|||+.++.....+..|..
T Consensus 288 ------------------------~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 288 ------------------------SFLYSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp ------------------------CCSBCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCCCCCS
T ss_pred ------------------------eEEEeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccccccc
Confidence 1123357889999999999999999999999999999998887766654432
Q ss_pred --cEEEEEEccCCCCC---CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-CCCCCEEEE-EECCCCCEEEEEeCCCc
Q 010759 381 --EIYTIRWSPTGSGT---NNPNQQLILASASFDSTVKLWDVELGKLLYSLN-GHREPVYSL-AFSPTGEYLASGSLDKS 453 (502)
Q Consensus 381 --~i~~~~~sp~g~~~---~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l-~~spdg~~lasgs~Dg~ 453 (502)
.+....|+|.+... ..++...+++++..++.|++||..+++.+..+. +|...|.++ +|||+|++||+|+ |+.
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg~~lasg~-d~~ 422 (435)
T 4e54_B 344 HLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMGDTLASAM-GYH 422 (435)
T ss_dssp SSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTSSCEEEEC-SSE
T ss_pred cceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCCCEEEEEc-CCc
Confidence 23344566655310 011111222333345689999999999988864 688889887 6999999999887 789
Q ss_pred EEEEeCCCCeeE
Q 010759 454 MHIWSLKEGKIV 465 (502)
Q Consensus 454 i~iw~~~~~~~~ 465 (502)
|+||++++|+..
T Consensus 423 i~iW~~~~gk~r 434 (435)
T 4e54_B 423 ILIWSQQEARTR 434 (435)
T ss_dssp EEECCCC-----
T ss_pred EEEEECCcCeee
Confidence 999999988753
No 98
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=1.7e-34 Score=281.68 Aligned_cols=273 Identities=15% Similarity=0.219 Sum_probs=217.1
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccCcce
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~ 288 (502)
..|...|++++|+|+|++|++|+.++ ++||+......... .+...+..+++.++++.+ ++|+.|++|++||+.+++.
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~ 93 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHIMS-QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQD 93 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEEEE-EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcceeee-eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcE
Confidence 34678899999999999999988775 78999875433222 222357788888888877 6788899999999999998
Q ss_pred eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCC-cceeeecCCCcceeEEEEcCCCCEEEE--EeCCCcEEEEe
Q 010759 289 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGEN-RPIKTFAGHQGEVNCVKWDPTGSLLAS--CSDDVTAKIWN 365 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~l~s--gs~dg~i~iwd 365 (502)
+..+. +..++.++.+..+..+++ .++.|++|++... +.+..+.. ....+++++ .+++. |+.||.|++||
T Consensus 94 ~~~~~-~~~~v~~v~~~~~~~~~~--~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd 165 (355)
T 3vu4_A 94 VSRIK-VDAPVKDLFLSREFIVVS--YGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITK 165 (355)
T ss_dssp EEEEE-CSSCEEEEEECSSEEEEE--ETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEE
T ss_pred EEEEE-CCCceEEEEEcCCEEEEE--EcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEE
Confidence 88876 456888888876654443 4789999999887 66665554 444566777 55555 68999999999
Q ss_pred CCCCc----------------eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe-EEEEeCCCCeEEEEee-
Q 010759 366 MKQDK----------------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDST-VKLWDVELGKLLYSLN- 427 (502)
Q Consensus 366 ~~~~~----------------~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~-i~iwd~~~~~~~~~~~- 427 (502)
+.++. .+..+.+|...|.+++|+|++. +|++|+.||+ |++||+++++++..+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~---------~l~s~s~d~~~v~iwd~~~~~~~~~~~~ 236 (355)
T 3vu4_A 166 LQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSD---------MVATCSQDGTIIRVFKTEDGVLVREFRR 236 (355)
T ss_dssp CCC------------------CCEEECCCSSCEEEEEECTTSS---------EEEEEETTCSEEEEEETTTCCEEEEEEC
T ss_pred CCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCC---------EEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 98765 2677889999999999999986 8999999998 9999999999999998
Q ss_pred C-CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE--E--------------------Eec--CCCEEEEEECCC
Q 010759 428 G-HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK--T--------------------YTG--NGGIFEVCWNKE 482 (502)
Q Consensus 428 ~-h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~--~--------------------~~~--~~~i~~~~ws~~ 482 (502)
+ |..+|++++|+|+|++|++|+.|++|+||++..+.... . +.. ......++|+++
T Consensus 237 g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d 316 (355)
T 3vu4_A 237 GLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISE 316 (355)
T ss_dssp TTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSS
T ss_pred CCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCC
Confidence 5 99999999999999999999999999999997653211 1 000 112356899999
Q ss_pred CCEEEEEECCCeEEEEEee
Q 010759 483 GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 483 g~~la~~~~~~~v~v~~~~ 501 (502)
|++|++++.||.+.+|+++
T Consensus 317 ~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 317 SSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CCEEEEEeCCCeEEEEEEE
Confidence 9999999999999999875
No 99
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-35 Score=287.46 Aligned_cols=256 Identities=25% Similarity=0.398 Sum_probs=215.2
Q ss_pred eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc--CcceeEEeeecccCeEEEecC-C--CceEEEEcCCCeEE
Q 010759 246 LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--TEEWKQQFEFHSGPTLDVDWR-N--NVSFATSSTDNMIY 320 (502)
Q Consensus 246 ~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~d~~i~ 320 (502)
....+.+|.++|++++|+|++++|++|+.|++|++||+. +......+..|..++.++.|. + ...+++++.|+.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp --CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 345678999999999999999999999999999999998 556677888899999999995 3 57889999999999
Q ss_pred EEEcCCCc--ceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCc--eeeecccCCCcEEEEEEccCCCCC
Q 010759 321 VCKIGENR--PIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGT 394 (502)
Q Consensus 321 ~~~~~~~~--~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~~~~~i~~~~~sp~g~~~ 394 (502)
+|++..+. .+..+.+|...|.+++|+|+ +.+|++++.|+.|++||+.... ....+..|...|.+++|+|.....
T Consensus 83 iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPATIEE 162 (379)
T ss_dssp EEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC---
T ss_pred EEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCccccc
Confidence 99999886 77788899999999999999 9999999999999999998773 344566789999999999942100
Q ss_pred CC----CCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCCCCCEEEEEECCC---CCEEEEEeCCCcEEEEeCCCCe
Q 010759 395 NN----PNQQLILASASFDSTVKLWDVELGK----LLYSLNGHREPVYSLAFSPT---GEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 395 ~~----~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~spd---g~~lasgs~Dg~i~iw~~~~~~ 463 (502)
.. .....+|++|+.||.|++||++++. .+..+.+|..+|++++|+|+ +.+|++++.||.|++|++.++.
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 00 0011278999999999999997653 55678899999999999999 8999999999999999998864
Q ss_pred ---eEEEEe---cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 ---IVKTYT---GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ---~~~~~~---~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
....+. ....|.+++|+|+|++||+++.||.|+||+++
T Consensus 243 ~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~ 286 (379)
T 3jrp_A 243 GPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 286 (379)
T ss_dssp SCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEE
T ss_pred ccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCC
Confidence 222222 34579999999999999999999999999986
No 100
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=6.6e-35 Score=287.54 Aligned_cols=246 Identities=19% Similarity=0.274 Sum_probs=202.6
Q ss_pred cccccceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 151 EGHTSEVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 151 ~~H~~~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
.+|...|++++|+| ++++|++|+.|+.|++||+.+.. . ..+.. ...+...|.+++|+|++++|+
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-----------~---~~~~~-~~~~~~~v~~~~~~~~~~~l~ 179 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-----------I---QVFAK-TDSWDYWYCCVDVSVSRQMLA 179 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-----------E---EEEEC-CCCSSCCEEEEEEETTTTEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-----------e---EEEec-cCCCCCCeEEEEECCCCCEEE
Confidence 47999999999999 68999999999999999987421 1 11111 123457799999999999999
Q ss_pred EEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 230 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
+|+.|+.|++|++.+.....+.+|...|.+++|+|++. +|++|+.|++|++||+++....
T Consensus 180 ~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------- 240 (383)
T 3ei3_B 180 TGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK------------------- 240 (383)
T ss_dssp EEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-------------------
T ss_pred EECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-------------------
Confidence 99999999999998888888999999999999999998 9999999999999999864210
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecccCC--------
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-------- 379 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~-------- 379 (502)
..++..+ +|...|.+++|+| ++.+|++++.|+.|++||++++..+..+..|.
T Consensus 241 ------------------~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 301 (383)
T 3ei3_B 241 ------------------NSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLT 301 (383)
T ss_dssp ------------------TCEEEEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSC
T ss_pred ------------------cceEEEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccccccc
Confidence 1112233 5888999999999 99999999999999999999887766655442
Q ss_pred ---------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEECCCCCEEEEE
Q 010759 380 ---------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 380 ---------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasg 448 (502)
..+..++|+|++. + +|+.||.|++||+.+++++..+.+ |...+..++|+|++++|++|
T Consensus 302 ~~~~~~~p~~~~~~~~~s~dg~---------~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~ 370 (383)
T 3ei3_B 302 PIKATWHPMYDLIVAGRYPDDQ---------L--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASG 370 (383)
T ss_dssp CCCCEECSSSSEEEEECBCCTT---------T--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEE
T ss_pred ceEEeccCCCCceEEEecCCcc---------c--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEe
Confidence 2333455555553 2 778999999999999999999987 45778888999999999999
Q ss_pred eCCCcEEEEeCCC
Q 010759 449 SLDKSMHIWSLKE 461 (502)
Q Consensus 449 s~Dg~i~iw~~~~ 461 (502)
+ ||.|+||++.+
T Consensus 371 s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 371 M-GFNILIWNRED 382 (383)
T ss_dssp E-TTEEEEEECC-
T ss_pred c-CCcEEEEecCC
Confidence 8 99999999864
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-36 Score=297.58 Aligned_cols=239 Identities=19% Similarity=0.282 Sum_probs=199.7
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCC---ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCccee
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~ 289 (502)
..+|++++|+|++++|++|+.|+.|+||+... .....+.+|..+|++++|+|++++|++|+.|++|++||+.++..
T Consensus 11 ~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~- 89 (377)
T 3dwl_C 11 PKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGT- 89 (377)
T ss_dssp SSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------C-
T ss_pred CCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCc-
Confidence 46799999999999999999999999999875 35567889999999999999999999999999999999876540
Q ss_pred EEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 290 QQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
..+...+.+|...|.+++|+|++++|++|+.|+.|++||++++
T Consensus 90 -------------------------------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~ 132 (377)
T 3dwl_C 90 -------------------------------------WKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQE 132 (377)
T ss_dssp -------------------------------------CCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC---
T ss_pred -------------------------------------eeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCc
Confidence 1123456678999999999999999999999999999999987
Q ss_pred c---eeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC------------------CCeEEEEee
Q 010759 370 K---YVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE------------------LGKLLYSLN 427 (502)
Q Consensus 370 ~---~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~------------------~~~~~~~~~ 427 (502)
. ....+.. |...|.+++|+|++. +|++|+.||.|++||+. .++++..+
T Consensus 133 ~~~~~~~~~~~~h~~~v~~~~~~~~~~---------~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 133 NDWWVSKHLKRPLRSTILSLDWHPNNV---------LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp --CCCCEEECSSCCSCEEEEEECTTSS---------EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred ccceeeeEeecccCCCeEEEEEcCCCC---------EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 6 3667777 899999999999886 79999999999999985 35566777
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee----EEEEecC-CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI----VKTYTGN-GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~----~~~~~~~-~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+|...|++++|+|+|++|++|+.||.|++|++.+++. +..+.++ ..|.+++|+|+|++|++|+.++.+ +|+.
T Consensus 203 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 203 PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEE-EECC
T ss_pred cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEE-EEEe
Confidence 8999999999999999999999999999999999876 6666654 469999999999999999877655 6654
No 102
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=2.9e-34 Score=277.68 Aligned_cols=248 Identities=19% Similarity=0.362 Sum_probs=215.5
Q ss_pred EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc----ceeEEeeecccCeEEEecCC---CceEEEEcCCCeEE
Q 010759 248 CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE----EWKQQFEFHSGPTLDVDWRN---NVSFATSSTDNMIY 320 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~d~~i~ 320 (502)
..+.+|.++|++++|+|++++|++|+.||+|++||+.++ .....+..|..++.++.|.. ...+++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 356789999999999999999999999999999999876 35667788999999999975 67889999999999
Q ss_pred EEEcCCC---------cceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEEEEeCCCCceeeecc-------------
Q 010759 321 VCKIGEN---------RPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAKIWNMKQDKYVHDLR------------- 376 (502)
Q Consensus 321 ~~~~~~~---------~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~iwd~~~~~~~~~~~------------- 376 (502)
+|++... +++..+.+|.+.|.+++|+|+ +.+|++++.||.|++||+++++.+..+.
T Consensus 85 vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 85 LWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9999876 557788899999999999999 9999999999999999998877654433
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCC----CEEEEEeC
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGHREPVYSLAFSPTG----EYLASGSL 450 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg----~~lasgs~ 450 (502)
.|...+.+++|+|+... ..++++++.++.+.+|+...++. +..+.+|..+|++++|+|++ ++|++|+.
T Consensus 165 ~~~~~~~~~~~~p~~~~------~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFS------PEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp SCSCCCEEEEECCCSSS------CCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred CcccceeEEEeccCCCC------CcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 56778999999997211 12789999999999998887765 67788999999999999998 89999999
Q ss_pred CCcEEEEeCCCC----------------------------------------------eeEEEEecC-CCEEEEEECCCC
Q 010759 451 DKSMHIWSLKEG----------------------------------------------KIVKTYTGN-GGIFEVCWNKEG 483 (502)
Q Consensus 451 Dg~i~iw~~~~~----------------------------------------------~~~~~~~~~-~~i~~~~ws~~g 483 (502)
||.|++|++..+ +.+..+.++ ..|.+++|+|+|
T Consensus 239 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~ 318 (351)
T 3f3f_A 239 DGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG 318 (351)
T ss_dssp TSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS
T ss_pred CCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC
Confidence 999999999875 455556554 569999999999
Q ss_pred CEEEEEECCCeEEEEEee
Q 010759 484 DKIAACFANHTVCVLDFR 501 (502)
Q Consensus 484 ~~la~~~~~~~v~v~~~~ 501 (502)
++||+|+.||.|+||++.
T Consensus 319 ~~l~s~~~dg~v~iw~~~ 336 (351)
T 3f3f_A 319 TILSSAGDDGKVRLWKAT 336 (351)
T ss_dssp CCEEEEETTSCEEEEEEC
T ss_pred CEEEEecCCCcEEEEecC
Confidence 999999999999999985
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=1.8e-35 Score=297.49 Aligned_cols=274 Identities=20% Similarity=0.390 Sum_probs=209.7
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc------------eeEeecCCC------------CCEEEEEecCCC-
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD------------LKCTLSKHK------------GPIFSLKWNKKG- 266 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~------------~~~~~~~h~------------~~V~~l~~~~~~- 266 (502)
+...|++++|+|+|++|++|+.||.|+||+.... ....+.+|. .+|++++|+|++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 4578999999999999999999999999997643 256788998 889999999998
Q ss_pred -CEEEEecCCCeEEEEeccCcceeEEe---eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee-cCCCccee
Q 010759 267 -DYLLTGSCDKTAIVWDVKTEEWKQQF---EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVN 341 (502)
Q Consensus 267 -~~l~sgs~D~~v~iwd~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~ 341 (502)
.+|++++.|++|++||+.++...... ..+.+............+....... +.. ...+...+ .+|...|.
T Consensus 107 ~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~----~~~-~~~~~~~~~~~h~~~v~ 181 (447)
T 3dw8_B 107 AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMD----LMV-EASPRRIFANAHTYHIN 181 (447)
T ss_dssp SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEE----EEE-EEEEEEEECSCCSSCCC
T ss_pred cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchh----eee-eccceEEeccCCCcceE
Confidence 79999999999999999775543211 0001100000000000000000000 000 01122333 68999999
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCC-Cceee-------ecccCCCcEEEEEEccCC-CCCCCCCCcEEEEEEeCCCeE
Q 010759 342 CVKWDPTGSLLASCSDDVTAKIWNMKQ-DKYVH-------DLREHSKEIYTIRWSPTG-SGTNNPNQQLILASASFDSTV 412 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg~i~iwd~~~-~~~~~-------~~~~~~~~i~~~~~sp~g-~~~~~~~~~~~l~sgs~dg~i 412 (502)
+++|+|++++|++| .|+.|++||+.+ +..+. .+..|...|.+++|+|++ . +|++|+.||.|
T Consensus 182 ~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~---------~l~s~~~dg~i 251 (447)
T 3dw8_B 182 SISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCN---------TFVYSSSKGTI 251 (447)
T ss_dssp EEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTT---------EEEEEETTSCE
T ss_pred EEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCc---------EEEEEeCCCeE
Confidence 99999999999999 799999999984 44443 366899999999999987 4 79999999999
Q ss_pred EEEeCCCCeE----EEEeeCCCC------------CEEEEEECCCCCEEEEEeCCCcEEEEeCCC-CeeEEEEecCCC--
Q 010759 413 KLWDVELGKL----LYSLNGHRE------------PVYSLAFSPTGEYLASGSLDKSMHIWSLKE-GKIVKTYTGNGG-- 473 (502)
Q Consensus 413 ~iwd~~~~~~----~~~~~~h~~------------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~-~~~~~~~~~~~~-- 473 (502)
++||+++++. +..+.+|.. .|++++|+|+|++|++++. +.|++||++. ++.+..+.++..
T Consensus 252 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~ 330 (447)
T 3dw8_B 252 RLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLR 330 (447)
T ss_dssp EEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGT
T ss_pred EEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccc
Confidence 9999998886 678888876 8999999999999999999 9999999997 888888876643
Q ss_pred --------------EEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 474 --------------IFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 474 --------------i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++.++|+|+|++||+|+.||.|+|||++
T Consensus 331 ~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~ 372 (447)
T 3dw8_B 331 SKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRN 372 (447)
T ss_dssp TTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETT
T ss_pred ccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcC
Confidence 3349999999999999999999999975
No 104
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=2.4e-34 Score=280.89 Aligned_cols=278 Identities=19% Similarity=0.328 Sum_probs=229.6
Q ss_pred ccCCCCeEEEEECCC---CCEEEEEECCCcEEEEECCC--cee-EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEec
Q 010759 210 NEKSKDVTTLDWNGE---GTLLATGSYDGQARIWSTNG--DLK-CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~---~~~l~sg~~dg~i~iw~~~~--~~~-~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~ 283 (502)
..|...|++++|+|+ |++|++|+.||.|++|+... ... ..+.+|..+|++++|+|++++|++|+.|++|++||+
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~ 115 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDL 115 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEc
Confidence 356788999999999 69999999999999999864 333 578889999999999999999999999999999999
Q ss_pred cCcceeEEeeecccCeEEEec--CCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCc
Q 010759 284 KTEEWKQQFEFHSGPTLDVDW--RNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVT 360 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~ 360 (502)
.+++... +..|..++.++.| ..+ ..+++++.|+.|++|++...+++..+..|. .+.++.+. ...+++++.++.
T Consensus 116 ~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~ 191 (368)
T 3mmy_A 116 SSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE-RCYCADVI--YPMAVVATAERG 191 (368)
T ss_dssp TTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS-CEEEEEEE--TTEEEEEEGGGC
T ss_pred CCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC-CceEEEec--CCeeEEEeCCCc
Confidence 9988665 5568889999998 544 568899999999999999999888888765 55566665 458889999999
Q ss_pred EEEEeCCCCceeeec--ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC---eEEEEeeCCCC----
Q 010759 361 AKIWNMKQDKYVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG---KLLYSLNGHRE---- 431 (502)
Q Consensus 361 i~iwd~~~~~~~~~~--~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~h~~---- 431 (502)
+++|++......... ..+...+.++.+.+.... ....+++|+.||.|++||++.. ..+..+.+|..
T Consensus 192 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~ 266 (368)
T 3mmy_A 192 LIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQN-----KPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTN 266 (368)
T ss_dssp EEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTS-----CEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC---
T ss_pred EEEEEeccccchhhhccccccCCCceEEEcccCCC-----CCCeEEEecCCCcEEEEecCCCCccccceeeeeeeccccc
Confidence 999999876443221 123345556665554431 1124899999999999999987 55677787876
Q ss_pred --------CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCCeEE
Q 010759 432 --------PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANHTVC 496 (502)
Q Consensus 432 --------~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~~v~ 496 (502)
+|++++|+|++++|++|+.||.|++||+.+++.+..+.+ ...|.+++|+|+|++||+|+.|+...
T Consensus 267 ~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~ 340 (368)
T 3mmy_A 267 TSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSK 340 (368)
T ss_dssp -CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTT
T ss_pred ccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEecccccc
Confidence 799999999999999999999999999999999988876 45699999999999999999987543
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=6.7e-35 Score=289.56 Aligned_cols=275 Identities=17% Similarity=0.250 Sum_probs=232.8
Q ss_pred eEEEEECCCCCEEE-EEECCCcEEEEECCCc-----eeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCc--
Q 010759 216 VTTLDWNGEGTLLA-TGSYDGQARIWSTNGD-----LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTE-- 286 (502)
Q Consensus 216 V~~l~~s~~~~~l~-sg~~dg~i~iw~~~~~-----~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~-- 286 (502)
...++++|+...++ +++.||.|+||+.... ....+.+|.++|++++|+| ++++|++|+.||+|++||+.++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~ 116 (402)
T 2aq5_A 37 SGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGL 116 (402)
T ss_dssp SCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCC
T ss_pred CCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCC
Confidence 44578888765444 5789999999997542 3345778999999999999 8999999999999999999887
Q ss_pred -----ceeEEeeecccCeEEEecCCC--ceEEEEcCCCeEEEEEcCCCcceeee--cCCCcceeEEEEcCCCCEEEEEeC
Q 010759 287 -----EWKQQFEFHSGPTLDVDWRNN--VSFATSSTDNMIYVCKIGENRPIKTF--AGHQGEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 287 -----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~d~~i~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~l~sgs~ 357 (502)
+....+..|...+.++.|..+ ..+++++.|+.|++|++..+.++..+ .+|...|.+++|+|++++|++++.
T Consensus 117 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~ 196 (402)
T 2aq5_A 117 VLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCR 196 (402)
T ss_dssp SSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEET
T ss_pred ccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEec
Confidence 557788889999999999766 47889999999999999999999888 889999999999999999999999
Q ss_pred CCcEEEEeCCCCceeeec-ccCCCc-EEEEEEccCCCCCCCCCCcEEEEEE---eCCCeEEEEeCCCCeE-EEEe-eCCC
Q 010759 358 DVTAKIWNMKQDKYVHDL-REHSKE-IYTIRWSPTGSGTNNPNQQLILASA---SFDSTVKLWDVELGKL-LYSL-NGHR 430 (502)
Q Consensus 358 dg~i~iwd~~~~~~~~~~-~~~~~~-i~~~~~sp~g~~~~~~~~~~~l~sg---s~dg~i~iwd~~~~~~-~~~~-~~h~ 430 (502)
||.|++||+++++.+..+ ..|... +.++.|+|++. +|++| +.|+.|++||+++++. +... ..|.
T Consensus 197 d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 267 (402)
T 2aq5_A 197 DKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK---------ILTTGFSRMSERQVALWDTKHLEEPLSLQELDTS 267 (402)
T ss_dssp TSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE---------EEEEEECTTCCEEEEEEETTBCSSCSEEEECCCC
T ss_pred CCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc---------EEEEeccCCCCceEEEEcCccccCCceEEeccCC
Confidence 999999999999998888 677765 89999999875 78888 7899999999987654 2222 2467
Q ss_pred CCEEEEEECCCCCEEEE-EeCCCcEEEEeCCCCee----EEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 431 EPVYSLAFSPTGEYLAS-GSLDKSMHIWSLKEGKI----VKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 431 ~~v~~l~~spdg~~las-gs~Dg~i~iw~~~~~~~----~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..|.+++|+|++++|++ |+.||.|++|++.+++. +..+.+...+.+++|+|++.++++ .++.+++|++.
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~~~~~~~~l~ 341 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KCEIARFYKLH 341 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GTEEEEEEEEE
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cceeEEEEEcC
Confidence 78999999999999975 55799999999998872 333444577999999999998775 56689999874
No 106
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-35 Score=315.64 Aligned_cols=251 Identities=26% Similarity=0.415 Sum_probs=209.6
Q ss_pred eeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC--C
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE--G 225 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~--~ 225 (502)
.++.+|.++|++++|+|+|++|++|+.||+|+||++.++. ..... ....|..+|++++|+++ +
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~-----------~~~~~----~l~~h~~~V~~l~~s~~~~~ 67 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGET-----------HKLID----TLTGHEGPVWRVDWAHPKFG 67 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTE-----------EEEEE----EECCCSSCEEEEEECCTTSC
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCC-----------Cccce----eccCCcCceEEEEecCCCCC
Confidence 5688999999999999999999999999999999986431 11112 22346789999999988 9
Q ss_pred CEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 226 TLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
++|++|+.||.|++|+.... ....+.+|..+|++++|+|+ +++|++|+.||+|++||++++...
T Consensus 68 ~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~----------- 136 (753)
T 3jro_A 68 TILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT----------- 136 (753)
T ss_dssp SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-----------
T ss_pred CEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-----------
Confidence 99999999999999998754 45677889999999999999 999999999999999999765321
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-------------CCCEEEEEeCCCcEEEEeCC
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-------------TGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-------------~~~~l~sgs~dg~i~iwd~~ 367 (502)
....+.+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 137 ----------------------------~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~ 188 (753)
T 3jro_A 137 ----------------------------SPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYN 188 (753)
T ss_dssp ----------------------------CCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEE
T ss_pred ----------------------------ceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEecc
Confidence 1223457888899999999 58999999999999999998
Q ss_pred CC----ceeeecccCCCcEEEEEEccC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe-----EEEEeeCCCCCEEE
Q 010759 368 QD----KYVHDLREHSKEIYTIRWSPT---GSGTNNPNQQLILASASFDSTVKLWDVELGK-----LLYSLNGHREPVYS 435 (502)
Q Consensus 368 ~~----~~~~~~~~~~~~i~~~~~sp~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~-----~~~~~~~h~~~v~~ 435 (502)
++ .+...+..|...|++++|+|+ +. +|++|+.||.|++||+.++. .+....+|...|++
T Consensus 189 ~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~---------~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~ 259 (753)
T 3jro_A 189 SDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS---------YLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWR 259 (753)
T ss_dssp TTTTEEEEEEEECCCSSCEEEEEECCCCSSSE---------EEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCC
T ss_pred CCcccceeeeeecCCCCcEEEEEeccCCCCCC---------EEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEE
Confidence 76 456678889999999999998 54 89999999999999998764 33344568899999
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
++|+|+|++|++|+.||.|++|++..
T Consensus 260 l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 260 ASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 99999999999999999999999874
No 107
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=7.2e-34 Score=282.08 Aligned_cols=247 Identities=25% Similarity=0.463 Sum_probs=205.4
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
+|...|++++|+|++++|++|+.||.|++|++.++.. +..+ ..|...|.+++| ++.+|++|
T Consensus 132 ~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~-------------~~~~----~~~~~~v~~~~~--~~~~l~~~ 192 (401)
T 4aez_A 132 DESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTK-------------LRTM----AGHQARVGCLSW--NRHVLSSG 192 (401)
T ss_dssp CTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCE-------------EEEE----CCCSSCEEEEEE--ETTEEEEE
T ss_pred CCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeE-------------EEEe----cCCCCceEEEEE--CCCEEEEE
Confidence 3899999999999999999999999999999876532 1122 245778999999 46799999
Q ss_pred ECCCcEEEEECC--CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 232 SYDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 232 ~~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
+.||.|++|+.. ......+.+|.+.|.+++|+|++.+|++|+.|++|++||++++..
T Consensus 193 ~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~--------------------- 251 (401)
T 4aez_A 193 SRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIP--------------------- 251 (401)
T ss_dssp ETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSE---------------------
T ss_pred cCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCc---------------------
Confidence 999999999986 345667889999999999999999999999999999999986542
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEe--CCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
+..+.+|...|.+++|+|++ .++++|+ .|+.|++||+.+++.+..+. +...+.+++
T Consensus 252 --------------------~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~~~ 310 (401)
T 4aez_A 252 --------------------KFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTSLI 310 (401)
T ss_dssp --------------------EEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEEEE
T ss_pred --------------------cEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEE
Confidence 23455788899999999976 5666655 79999999999999888775 567899999
Q ss_pred EccCCCCCCCCCCcEEEEE--EeCCCeEEEEeCCCCeEE--EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 387 WSPTGSGTNNPNQQLILAS--ASFDSTVKLWDVELGKLL--YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~s--gs~dg~i~iwd~~~~~~~--~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
|+|++. +|++ |+.||.|++||+.++... ..+.+|...|++++|+|+|++|++|+.||.|++|++.++
T Consensus 311 ~s~~~~---------~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 311 WSPHSK---------EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp ECSSSS---------EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-
T ss_pred ECCCCC---------eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCC
Confidence 999986 5566 558999999999986554 457799999999999999999999999999999999998
Q ss_pred eeEEEE
Q 010759 463 KIVKTY 468 (502)
Q Consensus 463 ~~~~~~ 468 (502)
+.+...
T Consensus 382 ~~~~~~ 387 (401)
T 4aez_A 382 DHVKRP 387 (401)
T ss_dssp ------
T ss_pred cccccc
Confidence 876554
No 108
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=3.7e-34 Score=286.80 Aligned_cols=260 Identities=24% Similarity=0.494 Sum_probs=215.6
Q ss_pred eeccccccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCC--CCCceEEEEEeeecccccCCCCeEEEEECCC
Q 010759 148 TILEGHTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQ--NGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE 224 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~ 224 (502)
..+.+|.+.|++++|+|+ +.+||+|+.||.|++|++.......... ..++ .. ...|...|++++|+|+
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~-----~~----~~~h~~~v~~l~~~~~ 192 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPD-----LR----LRGHQKEGYGLSWNPN 192 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCS-----EE----EECCSSCCCCEEECTT
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCc-----EE----ecCCCCCeEEEEeCCC
Confidence 456789999999999998 7899999999999999997532111100 1111 11 1245678999999999
Q ss_pred CC-EEEEEECCCcEEEEECCCc--------eeEeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 225 GT-LLATGSYDGQARIWSTNGD--------LKCTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 225 ~~-~l~sg~~dg~i~iw~~~~~--------~~~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
+. +|++|+.||.|++|++... ....+.+|...|.+++|+| ++.+|++++.|+.|++||++++..
T Consensus 193 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~------ 266 (430)
T 2xyi_A 193 LNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNT------ 266 (430)
T ss_dssp STTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCS------
T ss_pred CCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCC------
Confidence 98 9999999999999998651 1345678999999999999 678999999999999999986521
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCC-Ccee
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQ-DKYV 372 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~-~~~~ 372 (502)
.+++..+.+|...|++++|+|++. +|++|+.||.|++||+++ ...+
T Consensus 267 --------------------------------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~ 314 (430)
T 2xyi_A 267 --------------------------------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKL 314 (430)
T ss_dssp --------------------------------SSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCS
T ss_pred --------------------------------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCe
Confidence 123345567889999999999987 689999999999999997 5667
Q ss_pred eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--------------CeEEEEeeCCCCCEEEEEE
Q 010759 373 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--------------GKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 373 ~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--------------~~~~~~~~~h~~~v~~l~~ 438 (502)
..+..|...|.+++|+|++. .+|++++.||.|+|||+.. ...+..+.+|...|++++|
T Consensus 315 ~~~~~h~~~v~~i~~sp~~~--------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 315 HSFESHKDEIFQVQWSPHNE--------TILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp EEEECCSSCEEEEEECSSCT--------TEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred EEeecCCCCEEEEEECCCCC--------CEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE
Confidence 88888999999999999875 2789999999999999986 3678888999999999999
Q ss_pred CCCCC-EEEEEeCCCcEEEEeCCCC
Q 010759 439 SPTGE-YLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 439 spdg~-~lasgs~Dg~i~iw~~~~~ 462 (502)
+|+++ +|++++.||.|+||++...
T Consensus 387 ~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 387 NPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp CSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCCCEEEEEECCCCEEEeEcccc
Confidence 99999 8999999999999998754
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-35 Score=285.66 Aligned_cols=263 Identities=10% Similarity=0.061 Sum_probs=205.7
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEE
Q 010759 161 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 240 (502)
Q Consensus 161 ~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw 240 (502)
.+.+++++|+||+.||+|++||+.++.... .+. ...|.++.|+|+ +++|+.|++|++|
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~----------~~~---------~~~v~~~~~~~~---~~s~s~D~~i~~w 100 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTIT----------TIT---------TPNPRTGGEHPA---IISRGPCNRLLLL 100 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEE----------EEE---------EECCCTTCCCCS---EEEECSTTEEEEE
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEE----------EEe---------cCCceeeeeCCc---eEEecCCCeEEEE
Confidence 456688999999999999999998765321 111 235777888888 9999999999999
Q ss_pred ECCCce----------eEe-ecCCCCCEEEEEecC--CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC
Q 010759 241 STNGDL----------KCT-LSKHKGPIFSLKWNK--KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN 307 (502)
Q Consensus 241 ~~~~~~----------~~~-~~~h~~~V~~l~~~~--~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 307 (502)
+..+.. ... ..+|.++|.+++|+| ++++|++|+.|++|++||+++++....+
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~--------------- 165 (343)
T 3lrv_A 101 YPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH--------------- 165 (343)
T ss_dssp ETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE---------------
T ss_pred EccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE---------------
Confidence 865432 222 236778999999999 9999999999999999999877542211
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee-eeccc-CCCcEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV-HDLRE-HSKEIYTI 385 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~-~~~~i~~~ 385 (502)
...|...+.+++|+|++.+|++|+.||.|++||+++++.+ ..+.. |..+|.++
T Consensus 166 -------------------------~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l 220 (343)
T 3lrv_A 166 -------------------------SAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEV 220 (343)
T ss_dssp -------------------------CCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEE
T ss_pred -------------------------ecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEE
Confidence 1124556899999999999999999999999999999887 77887 99999999
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC---CCCCEE--EEEECCCCCEEEEEeC-CCcEEEEeC
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG---HREPVY--SLAFSPTGEYLASGSL-DKSMHIWSL 459 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~---h~~~v~--~l~~spdg~~lasgs~-Dg~i~iw~~ 459 (502)
+|+|++. +|++++ |+.|++||+++++.+..+.. |...+. +++|+|+|++|++++. |+.|+||++
T Consensus 221 ~fs~~g~---------~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~ 290 (343)
T 3lrv_A 221 KFADNGY---------WMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKF 290 (343)
T ss_dssp EECTTSS---------EEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEE
T ss_pred EEeCCCC---------EEEEEe-CCeEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEE
Confidence 9999986 788888 55999999998876655443 434444 6999999999999998 999999999
Q ss_pred CCCeeEEEEecCCCEEEEEECC---CCCEEEEEECCCeEEEE
Q 010759 460 KEGKIVKTYTGNGGIFEVCWNK---EGDKIAACFANHTVCVL 498 (502)
Q Consensus 460 ~~~~~~~~~~~~~~i~~~~ws~---~g~~la~~~~~~~v~v~ 498 (502)
.++...... ..+..++|+| +++.|++++.|+.+.++
T Consensus 291 ~~~~~~~~~---~~~~~~~~~~~~~~~~~l~~~~~d~~~~~~ 329 (343)
T 3lrv_A 291 DKKTKNWTK---DEESALCLQSDTADFTDMDVVCGDGGIAAI 329 (343)
T ss_dssp CTTTCSEEE---EEEEECCC----CCCCEEEEEEETTEEEEE
T ss_pred cccccceEe---cCceeEecCccccccceeEEEecCCceEEE
Confidence 765433222 4567788998 88899999999988766
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.1e-34 Score=288.13 Aligned_cols=286 Identities=18% Similarity=0.310 Sum_probs=235.0
Q ss_pred ceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCEEEEEEC
Q 010759 156 EVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTLLATGSY 233 (502)
Q Consensus 156 ~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~l~sg~~ 233 (502)
....++++|+.. ++++|+.||.|+||++....... .......+|...|++++|+| ++.+|++|+.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~-------------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~ 102 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVD-------------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSE 102 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECC-------------TTCCCBCCCSSCEEEEEECTTCTTEEEEEET
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCC-------------CCCceEecCCCCEEEEEeCCCCCCEEEEEeC
Confidence 355689999875 55568999999999986432110 00112235678999999999 9999999999
Q ss_pred CCcEEEEECCC--------ceeEeecCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccCcceeEEe--eecccCeEEE
Q 010759 234 DGQARIWSTNG--------DLKCTLSKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKTEEWKQQF--EFHSGPTLDV 302 (502)
Q Consensus 234 dg~i~iw~~~~--------~~~~~~~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~~~~~~~~--~~~~~~~~~~ 302 (502)
||.|+||+... .....+.+|...|++++|+|++ ++|++|+.|++|++||+.+++....+ ..|...+.++
T Consensus 103 dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~ 182 (402)
T 2aq5_A 103 DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSV 182 (402)
T ss_dssp TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEE
T ss_pred CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEE
Confidence 99999999864 3456788999999999999998 69999999999999999999988888 7789999999
Q ss_pred ecCC-CceEEEEcCCCeEEEEEcCCCcceeee-cCCCcc-eeEEEEcCCCCEEEEE---eCCCcEEEEeCCCCce-eeec
Q 010759 303 DWRN-NVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGE-VNCVKWDPTGSLLASC---SDDVTAKIWNMKQDKY-VHDL 375 (502)
Q Consensus 303 ~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~l~sg---s~dg~i~iwd~~~~~~-~~~~ 375 (502)
.|.. ...+++++.|+.|++|++.....+..+ .+|.+. +.++.|+|++.+|++| +.|+.|++||+++... +...
T Consensus 183 ~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~ 262 (402)
T 2aq5_A 183 DWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQ 262 (402)
T ss_dssp EECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEE
T ss_pred EECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEE
Confidence 9974 557889999999999999999988888 788876 8999999999999999 7999999999988654 2222
Q ss_pred c-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-EEEeeC--CCCCEEEEEECCCCCEEEEEeCC
Q 010759 376 R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL-LYSLNG--HREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 376 ~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~-~~~~~~--h~~~v~~l~~spdg~~lasgs~D 451 (502)
. .+...+.+++|+|++. .++++|+.||.|++||+.+++. +..+.. |..+|++++|+|++.++++ .+
T Consensus 263 ~~~~~~~v~~~~~s~~~~--------~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~~~~~s--~~ 332 (402)
T 2aq5_A 263 ELDTSSGVLLPFFDPDTN--------IVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKRGLEVN--KC 332 (402)
T ss_dssp ECCCCSSCEEEEEETTTT--------EEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGGGSCGG--GT
T ss_pred eccCCCceeEEEEcCCCC--------EEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccccccee--cc
Confidence 2 4667899999999986 3445677899999999998773 444433 5689999999999998875 56
Q ss_pred CcEEEEeCCCCee
Q 010759 452 KSMHIWSLKEGKI 464 (502)
Q Consensus 452 g~i~iw~~~~~~~ 464 (502)
+.+++|++.++..
T Consensus 333 ~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 333 EIARFYKLHERKC 345 (402)
T ss_dssp EEEEEEEEETTEE
T ss_pred eeEEEEEcCCCcE
Confidence 7999999988765
No 111
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=4.1e-34 Score=278.95 Aligned_cols=278 Identities=12% Similarity=0.154 Sum_probs=209.7
Q ss_pred eeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+..+.+|...|++++|||||++||+|+.|+ ++||++.++.. .. . .. ...+..++|.++++
T Consensus 12 ~~~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~-----------~~--~--~~----~~~~~~~~~~~~~~ 71 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAH-----------IM--S--QE----MRHLSKVRMLHRTN 71 (355)
T ss_dssp -------CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEE-----------EE--E--EE----CSCCCEEEECTTSS
T ss_pred ccccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCcce-----------ee--e--ee----cCCeEEEEEcCCCC
Confidence 345678999999999999999999998775 78999764321 00 1 01 12477888998888
Q ss_pred EE-EEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc-ceeEEeeecccCeEEEe
Q 010759 227 LL-ATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-EWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 227 ~l-~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~-~~~~~~~~~~~~~~~~~ 303 (502)
++ ++|+.|+.|++||... .....+. |..+|.+++|+++. ++++ .|+.|++||+.++ +.+..+.. ...+..+.
T Consensus 72 ~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s 146 (355)
T 3vu4_A 72 YVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIR-FGGVCEFS 146 (355)
T ss_dssp EEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEE-EEEEEEEE
T ss_pred EEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEecc-CCceEEEE
Confidence 77 5678889999999864 4444554 67799999999864 4443 4889999999887 55555544 22233333
Q ss_pred cCCCceEEE--EcCCCeEEEEEcCCCc---------------c-eeeecCCCcceeEEEEcCCCCEEEEEeCCCc-EEEE
Q 010759 304 WRNNVSFAT--SSTDNMIYVCKIGENR---------------P-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVT-AKIW 364 (502)
Q Consensus 304 ~~~~~~~~~--~~~d~~i~~~~~~~~~---------------~-~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~-i~iw 364 (502)
+ ..++. ++.++.|++|++.... + +..+.+|.+.|.+++|+|+|++|++|+.|++ |+||
T Consensus 147 ~---~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iw 223 (355)
T 3vu4_A 147 N---GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVF 223 (355)
T ss_dssp T---TEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEE
T ss_pred c---cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEE
Confidence 3 33443 6889999999998754 3 7789999999999999999999999999998 9999
Q ss_pred eCCCCceeeecc-c-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEE---------------
Q 010759 365 NMKQDKYVHDLR-E-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYS--------------- 425 (502)
Q Consensus 365 d~~~~~~~~~~~-~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~--------------- 425 (502)
|+++++++..+. + |...|++++|+|++. +|++|+.|++|++||+..+.. ...
T Consensus 224 d~~~~~~~~~~~~g~h~~~v~~~~~s~~~~---------~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (355)
T 3vu4_A 224 KTEDGVLVREFRRGLDRADVVDMKWSTDGS---------KLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWS 294 (355)
T ss_dssp ETTTCCEEEEEECTTCCSCEEEEEECTTSC---------EEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSC
T ss_pred ECCCCcEEEEEEcCCCCCcEEEEEECCCCC---------EEEEEECCCEEEEEEccCCCCcccccccceeeccccccccc
Confidence 999999999998 5 899999999999986 899999999999999975421 111
Q ss_pred -----ee-CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 426 -----LN-GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 426 -----~~-~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
+. .+..+...++|+|+|++|++++.||.+++|++..
T Consensus 295 ~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 295 LCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp SEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEE
T ss_pred eeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 11 1122346799999999999999999999998754
No 112
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=2.1e-32 Score=274.01 Aligned_cols=277 Identities=13% Similarity=0.101 Sum_probs=237.5
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeE-----eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcc
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKC-----TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~-----~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~ 287 (502)
..+.+++|+|++.++++++.++.|++|+... .... .+.+|.+.|.+++|+|++..+++++.|++|++||+.+++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 3466899999888888888899999999874 3333 345789999999999999999999999999999999999
Q ss_pred eeEEeeecccCeEEEecCCCc--eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe--------C
Q 010759 288 WKQQFEFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--------D 357 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs--------~ 357 (502)
....+..+...+..+.|..+. .+++++.++.|++|++...+.+..+..+ ..+.+++|+|+++++++++ .
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~~~~~~~~~ 281 (433)
T 3bws_A 203 YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI-GLPRGLLLSKDGKELYIAQFSASNQESG 281 (433)
T ss_dssp EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC-SEEEEEEECTTSSEEEEEEEESCTTCSC
T ss_pred EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC-CCceEEEEcCCCCEEEEEECCCCccccC
Confidence 888888888888888886443 4456668999999999988887777654 4589999999999999888 5
Q ss_pred CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEE
Q 010759 358 DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLA 437 (502)
Q Consensus 358 dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~ 437 (502)
|+.|++||+.+++.+..+ .+...+..++|+|++. .++++++.|+.|++||+.+++.+..+. +...+.+++
T Consensus 282 dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~--------~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~ 351 (433)
T 3bws_A 282 GGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTEN--------KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIA 351 (433)
T ss_dssp CEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTT--------EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEE
T ss_pred CCeEEEEECCCCcEEeec-cCCCCcceEEECCCCC--------EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEE
Confidence 899999999988876654 4556788999999875 367788999999999999999888876 677899999
Q ss_pred ECCCCCEEEEEeC---------------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 438 FSPTGEYLASGSL---------------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 438 ~spdg~~lasgs~---------------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
|+|+|++|++++. ||.|++||+.+++.+..+.....+.+++|+|+|++|++++. +++|.||++.
T Consensus 352 ~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 352 LSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp ECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred EcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 9999999988876 57999999999999999888778999999999999998875 9999999975
No 113
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-34 Score=281.93 Aligned_cols=266 Identities=20% Similarity=0.324 Sum_probs=210.5
Q ss_pred cccceeEEEECCC----CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-CCCE
Q 010759 153 HTSEVCACAWSPA----GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG-EGTL 227 (502)
Q Consensus 153 H~~~V~~~~~spd----~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~-~~~~ 227 (502)
|...|++++|+|+ +++|++|+.||.|++||+.++.. +..+ ..|...|.+++|+| ++.+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~-------------~~~~----~~~~~~i~~~~~~~~~~~~ 130 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQC-------------IKHY----VGHGNAINELKFHPRDPNL 130 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCE-------------EEEE----ESCCSCEEEEEECSSCTTE
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceE-------------eeee----cCCCCcEEEEEECCCCCCE
Confidence 6688999999999 67999999999999999876531 1122 23578899999999 9999
Q ss_pred EEEEECCCcEEEEECCC-ceeEee---cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 228 LATGSYDGQARIWSTNG-DLKCTL---SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~-~~~~~~---~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
|++|+.||.|++|+... .....+ ..|...|++++|+|++++|++|+.|+.|++||+++++....+..+. .
T Consensus 131 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~------~ 204 (366)
T 3k26_A 131 LLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESY------D 204 (366)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHH------T
T ss_pred EEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeE------E
Confidence 99999999999999875 444455 6899999999999999999999999999999998876544332210 0
Q ss_pred cCCCce-EEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce-----------
Q 010759 304 WRNNVS-FATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY----------- 371 (502)
Q Consensus 304 ~~~~~~-~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~----------- 371 (502)
+..+.. +.... .. ..........+|...|.+++|+ +.+|++++.|+.|++||+.+...
T Consensus 205 ~~~~~~~~~~~~----~~----~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~ 274 (366)
T 3k26_A 205 YNPNKTNRPFIS----QK----IHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESN 274 (366)
T ss_dssp CCGGGCSSCCCC----EE----ECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCC
T ss_pred ecCCCCcccccc----ee----eccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcc
Confidence 100000 00000 00 0111234556799999999998 77999999999999999987644
Q ss_pred ---eeecccCCCcEEEEEEccC--CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe----EEEEeeCC--CCCEEEEEECC
Q 010759 372 ---VHDLREHSKEIYTIRWSPT--GSGTNNPNQQLILASASFDSTVKLWDVELGK----LLYSLNGH--REPVYSLAFSP 440 (502)
Q Consensus 372 ---~~~~~~~~~~i~~~~~sp~--g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~----~~~~~~~h--~~~v~~l~~sp 440 (502)
+..+..|...|.+++|+|+ +. +|++|+.||.|++||+.+++ ....+.+| ..+|++++|+|
T Consensus 275 ~~~~~~~~~~~~~v~~~~~s~~~~~~---------~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 345 (366)
T 3k26_A 275 VTILGRFDYSQCDIWYMRFSMDFWQK---------MLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSR 345 (366)
T ss_dssp EEEEEEEECSSCCSSCCCCEECTTSS---------EEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECT
T ss_pred hheeccccccCCcEEEEEEcCCCCCc---------EEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCC
Confidence 6677778888999999998 65 79999999999999999875 55577777 78999999999
Q ss_pred CCCEEEEEeCCCcEEEEeCC
Q 010759 441 TGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~ 460 (502)
++++|++|+.||.|++||+.
T Consensus 346 ~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 346 DSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TSSEEEEEETTSEEEEEEC-
T ss_pred CCCeEEEEeCCCEEEEEEec
Confidence 99999999999999999985
No 114
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.7e-33 Score=281.96 Aligned_cols=246 Identities=24% Similarity=0.439 Sum_probs=213.7
Q ss_pred EeecCCCCCEEEEEecCC-CCEEEEecCCCeEEEEeccC----------cceeEEeeecccCeEEEecCCC-c-eEEEEc
Q 010759 248 CTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKT----------EEWKQQFEFHSGPTLDVDWRNN-V-SFATSS 314 (502)
Q Consensus 248 ~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~~----------~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~ 314 (502)
.....|.+.|++++|+|+ +.+|++|+.||.|++||+.+ ......+..|...+.++.|... . .+++++
T Consensus 122 ~~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~ 201 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS 201 (430)
T ss_dssp EEEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC
T ss_pred EEEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe
Confidence 345679999999999997 67899999999999999986 5667778889999999999654 3 788999
Q ss_pred CCCeEEEEEcCCCcc-------eeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCC---ceeeecccCCCcEE
Q 010759 315 TDNMIYVCKIGENRP-------IKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQD---KYVHDLREHSKEIY 383 (502)
Q Consensus 315 ~d~~i~~~~~~~~~~-------~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~---~~~~~~~~~~~~i~ 383 (502)
.|+.|++|++..... ...+.+|...|.+++|+| ++.+|++++.||.|++||++++ +.+..+..|...|.
T Consensus 202 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~ 281 (430)
T 2xyi_A 202 DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVN 281 (430)
T ss_dssp TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSCEE
T ss_pred CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCCeE
Confidence 999999999987321 456779999999999999 6789999999999999999977 56777788999999
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGE-YLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~ 461 (502)
+++|+|++. .+|++|+.||.|++||+++ ..++..+.+|..+|++++|+|++. +|++++.||.|+||++..
T Consensus 282 ~i~~~p~~~--------~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 282 CLSFNPYSE--------FILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp EEEECSSCT--------TEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGG
T ss_pred EEEeCCCCC--------CEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCC
Confidence 999999875 3789999999999999997 567888999999999999999995 699999999999999986
Q ss_pred --------------CeeEEEEecCC-CEEEEEECCCCC-EEEEEECCCeEEEEEee
Q 010759 462 --------------GKIVKTYTGNG-GIFEVCWNKEGD-KIAACFANHTVCVLDFR 501 (502)
Q Consensus 462 --------------~~~~~~~~~~~-~i~~~~ws~~g~-~la~~~~~~~v~v~~~~ 501 (502)
..++..+.++. .|.+++|+|++. +||+++.|+.|.||++.
T Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~ 409 (430)
T 2xyi_A 354 IGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMA 409 (430)
T ss_dssp TTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEEC
T ss_pred CccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcc
Confidence 24556665544 599999999999 99999999999999975
No 115
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-32 Score=266.68 Aligned_cols=245 Identities=20% Similarity=0.310 Sum_probs=222.2
Q ss_pred eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEcCCCeEEEEEcC
Q 010759 247 KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIG 325 (502)
Q Consensus 247 ~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~ 325 (502)
...+.+|.++|++++|+|++++|++|+.|+.|++||+.+++....+..|...+.++.|.. ...+++++.|+.|++|++.
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~ 104 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVS 104 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 346789999999999999999999999999999999999999999999999999999975 5578899999999999999
Q ss_pred CCcceeeecCCCcceeEEEEcCCCCEEEEEeCC-----CcEEEEeCCCCc-----------eeeecccCCC--cEEEEEE
Q 010759 326 ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-----VTAKIWNMKQDK-----------YVHDLREHSK--EIYTIRW 387 (502)
Q Consensus 326 ~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d-----g~i~iwd~~~~~-----------~~~~~~~~~~--~i~~~~~ 387 (502)
..+.+..+. |...+.+++|+|++++|++++.+ +.|++||+.... .+..+..|.. .+.+++|
T Consensus 105 ~~~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (369)
T 3zwl_B 105 NGQCVATWK-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGW 183 (369)
T ss_dssp TCCEEEEEE-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEE
T ss_pred CCcEEEEee-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEE
Confidence 998888887 88899999999999999999999 999999987654 2333444555 8999999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
+|++. +|++++.||.|++||+++ ++.+..+..|...|++++|+|++++|++++.||.|++||+.+++.+.
T Consensus 184 ~~~~~---------~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~ 254 (369)
T 3zwl_B 184 STKGK---------YIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLK 254 (369)
T ss_dssp CGGGC---------EEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE
T ss_pred cCCCC---------EEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceee
Confidence 99886 789999999999999998 78889999999999999999999999999999999999999999999
Q ss_pred EEecCCCEEEEEECCCCCEEEEEECCC--------------eEEEEEee
Q 010759 467 TYTGNGGIFEVCWNKEGDKIAACFANH--------------TVCVLDFR 501 (502)
Q Consensus 467 ~~~~~~~i~~~~ws~~g~~la~~~~~~--------------~v~v~~~~ 501 (502)
.+.....+..++|+|+++++++++.++ .+.+||++
T Consensus 255 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~ 303 (369)
T 3zwl_B 255 KYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKI 303 (369)
T ss_dssp EEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETT
T ss_pred eecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecC
Confidence 998888899999999999999999988 78888864
No 116
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.3e-34 Score=304.65 Aligned_cols=253 Identities=25% Similarity=0.441 Sum_probs=209.3
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC---ceeEeecCCCCCEEEEEecCC--CCEEEEecCCCeEEEEecc
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG---DLKCTLSKHKGPIFSLKWNKK--GDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~---~~~~~~~~h~~~V~~l~~~~~--~~~l~sgs~D~~v~iwd~~ 284 (502)
.+|.+.|++++|+|++++|++|+.||.|+||+..+ .....+.+|.++|++++|+|+ +++|++|+.||+|++||+.
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 35678999999999999999999999999999753 345678899999999999988 8999999999999999987
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC--CCEEEEEeCCCcEE
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT--GSLLASCSDDVTAK 362 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~--~~~l~sgs~dg~i~ 362 (502)
++.+. .+..+.+|...|.+++|+|+ +.++++|+.||.|+
T Consensus 86 ~~~~~---------------------------------------~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 86 NGRWS---------------------------------------QIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp TTEEE---------------------------------------EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred CCccc---------------------------------------ccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 75421 23345678899999999999 99999999999999
Q ss_pred EEeCCCCc--eeeecccCCCcEEEEEEccCCCCCCC----CCCcEEEEEEeCCCeEEEEeCCCC----eEEEEeeCCCCC
Q 010759 363 IWNMKQDK--YVHDLREHSKEIYTIRWSPTGSGTNN----PNQQLILASASFDSTVKLWDVELG----KLLYSLNGHREP 432 (502)
Q Consensus 363 iwd~~~~~--~~~~~~~~~~~i~~~~~sp~g~~~~~----~~~~~~l~sgs~dg~i~iwd~~~~----~~~~~~~~h~~~ 432 (502)
+||++++. ....+..|...|.+++|+|....... .....+|++|+.||.|++||++++ ..+..+.+|..+
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 99998773 34456678999999999995210000 001126899999999999999876 566788999999
Q ss_pred EEEEEECCC---CCEEEEEeCCCcEEEEeCCCCee-----EE-EEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 433 VYSLAFSPT---GEYLASGSLDKSMHIWSLKEGKI-----VK-TYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 433 v~~l~~spd---g~~lasgs~Dg~i~iw~~~~~~~-----~~-~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|++++|+|+ +.+|++|+.||.|++|++.++.. +. .......|++++|+|+|++|++|+.||.|+|||++
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~ 284 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecC
Confidence 999999999 89999999999999999988631 11 11234568999999999999999999999999975
No 117
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=6.5e-34 Score=281.50 Aligned_cols=234 Identities=13% Similarity=0.138 Sum_probs=164.8
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCce------eEeecCCCCCEEEEEecC--------CCCEEEEecCCCeEEE
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDL------KCTLSKHKGPIFSLKWNK--------KGDYLLTGSCDKTAIV 280 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~------~~~~~~h~~~V~~l~~~~--------~~~~l~sgs~D~~v~i 280 (502)
.+....+++++.+|++|+.|++|+||+..... ...+.+|.+.|++|+|+| ++++|+|||.|++|+|
T Consensus 91 ~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~ 170 (393)
T 4gq1_A 91 DGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLII 170 (393)
T ss_dssp ------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEE
T ss_pred CcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEE
Confidence 33444555677899999999999999976532 224679999999999998 7889999999999999
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCC
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDV 359 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg 359 (502)
||+.++... ..+.+|...|.+++|+|++. +|++|+.|+
T Consensus 171 Wd~~~~~~~-----------------------------------------~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~ 209 (393)
T 4gq1_A 171 WRLTDEGPI-----------------------------------------LAGYPLSSPGISVQFRPSNPNQLIVGERNG 209 (393)
T ss_dssp EEEETTEEE-----------------------------------------EEEEECSSCEEEEEEETTEEEEEEEEETTS
T ss_pred EECCCCcee-----------------------------------------eeecCCCCCcEEEEECCCCCceEEecCCCC
Confidence 998765422 23445778899999999874 799999999
Q ss_pred cEEEEeCCCCceeeec-------------------------ccCCCcEEEEEEc-cCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 360 TAKIWNMKQDKYVHDL-------------------------REHSKEIYTIRWS-PTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 360 ~i~iwd~~~~~~~~~~-------------------------~~~~~~i~~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
+|++||+++++..... ..|...+.++.|+ |++. .|++++.|++++
T Consensus 210 ~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~---------~l~s~s~d~~i~ 280 (393)
T 4gq1_A 210 NIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGS---------GILAMCKSGAWL 280 (393)
T ss_dssp EEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTC---------EEEEECTTSEEE
T ss_pred EEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCC---------EEEEEeCCCCEE
Confidence 9999999876543221 2455667777776 5654 789999999999
Q ss_pred EEeCCCCeEEEEeeCCCCCEEEEEECC--------------------CCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cCC
Q 010759 414 LWDVELGKLLYSLNGHREPVYSLAFSP--------------------TGEYLASGSLDKSMHIWSLKEGKIVKTYT-GNG 472 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h~~~v~~l~~sp--------------------dg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~~ 472 (502)
+||+..+.....+..|...+..+.++| ++.++++|+.||.|+|||+.++..+..+. +..
T Consensus 281 vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~ 360 (393)
T 4gq1_A 281 RWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGM 360 (393)
T ss_dssp EEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSS
T ss_pred EEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCC
Confidence 999998877777666665555544443 33467888999999999999988766554 456
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 473 GIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.|.+++|||||++||+++.+| +.+|.
T Consensus 361 ~V~svafspdG~~LA~as~~G-v~lvr 386 (393)
T 4gq1_A 361 PIVDFCWHQDGSHLAIATEGS-VLLTR 386 (393)
T ss_dssp CEEEEEECTTSSEEEEEESSE-EEEEE
T ss_pred cEEEEEEcCCCCEEEEEeCCC-eEEEE
Confidence 799999999999999999876 44444
No 118
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=8.4e-34 Score=280.69 Aligned_cols=282 Identities=13% Similarity=0.101 Sum_probs=186.4
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC-----
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG----- 223 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~----- 223 (502)
....|...+....+++++.+||+|+.|++|+|||+.++.. ..........+|...|.+++|+|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~------------~~~~~~~~~~gH~~~v~~v~~~p~~~~~ 151 (393)
T 4gq1_A 84 SENLHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETI------------ITQHVLGGKSGHHNFVNDIDIADVYSAD 151 (393)
T ss_dssp ECC----------CCEEEEEEEEEETTSCEEEEEEETTEE------------EEEEEECTTTSCSSCEEEEEEEEEECTT
T ss_pred cccccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCcc------------ceeeeecccCCCCCceEEEEEccccccc
Confidence 3445666677777788899999999999999999876531 11122334567889999999997
Q ss_pred ---CCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCC-EEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 224 ---EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 224 ---~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
++++|+||+.|++|+|||+. +.....+..|..+|.+++|+|++. +|++|+.|++|++||+++++.......+...
T Consensus 152 ~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~ 231 (393)
T 4gq1_A 152 NRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELV 231 (393)
T ss_dssp CSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------C
T ss_pred cCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCc
Confidence 89999999999999999975 455566778999999999999874 7999999999999999988755443322211
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCceeeeccc
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~-p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 377 (502)
.... +.-.............+|...+.++.|+ |+++.|++++.|+++++||+..+.....+..
T Consensus 232 ~~~~----------------~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~ 295 (393)
T 4gq1_A 232 KNPW----------------LLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISD 295 (393)
T ss_dssp SCCC----------------SEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-----------
T ss_pred ccce----------------EEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEee
Confidence 1000 0001111111122345788899999987 8999999999999999999998887777777
Q ss_pred CCCcEEEEEEccCCCCC-----------CCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEE
Q 010759 378 HSKEIYTIRWSPTGSGT-----------NNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA 446 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~-----------~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la 446 (502)
|...+..+.+.|++... ..+....++++|+.||.|+|||+.+++++..+.+|..+|++|+|||||++||
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA 375 (393)
T 4gq1_A 296 STMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLA 375 (393)
T ss_dssp --------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEE
T ss_pred ecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEE
Confidence 77777777666653210 1123456788999999999999999998888888999999999999999999
Q ss_pred EEeCCCcEEEEeC
Q 010759 447 SGSLDKSMHIWSL 459 (502)
Q Consensus 447 sgs~Dg~i~iw~~ 459 (502)
+++.+| +.+|.+
T Consensus 376 ~as~~G-v~lvrL 387 (393)
T 4gq1_A 376 IATEGS-VLLTRL 387 (393)
T ss_dssp EEESSE-EEEEEE
T ss_pred EEeCCC-eEEEEE
Confidence 999877 555654
No 119
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-33 Score=281.82 Aligned_cols=257 Identities=14% Similarity=0.088 Sum_probs=210.5
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
...|.+++|||||+++||++.|++|+ +. .....+.+|...|++++|+|+| .++++.+|+.+..... .+
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~--~~~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~~~~~~-~~ 82 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QP--KYAKDINCNSKNLFHVKEFPLE-------FENKLDFELAQQNGLL-NS 82 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EE--CCCSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCCSSCSS-TT
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--cc--cccceecCCCccEEEEEECCCC-------CcceEEEEeCCCceEe-ec
Confidence 46799999999999999999999999 53 3334557999999999999998 5677666665433221 11
Q ss_pred eecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeeecCCCc-----ceeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 293 EFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTFAGHQG-----EVNCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
.+...+.++.|.++ ..+++++.|+.+++|+... .+..+. |.. .|.+++|||||++||+|+.||+|+|||+
T Consensus 83 -~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~ 158 (588)
T 2j04_A 83 -QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSI 158 (588)
T ss_dssp -SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEEC
T ss_pred -CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEEC
Confidence 33678999999754 5689999999999999644 555666 665 4999999999999999999999999999
Q ss_pred CCCce-------eeec----ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEe-eCCCC
Q 010759 367 KQDKY-------VHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSL-NGHRE 431 (502)
Q Consensus 367 ~~~~~-------~~~~----~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~-~~h~~ 431 (502)
.++.. +.++ .+|...|.+++|+|+| +++++.|++|++||+..+.. ..++ .+|..
T Consensus 159 ~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-----------Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~ 227 (588)
T 2j04_A 159 RKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-----------LVAALSNNSVFSMTVSASSHQPVSRMIQNASRR 227 (588)
T ss_dssp CCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-----------EEEEETTCCEEEECCCSSSSCCCEEEEECCCSS
T ss_pred CCCccccccceeeeeeecccccccccEEEEEEcCCc-----------EEEEeCCCeEEEEECCCCccccceeeecccccC
Confidence 98753 4565 5677899999999975 57788899999999987763 4566 47889
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE-ecCCCEEEEEE--CCCCCEEEEEECCCeEEEEEe
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY-TGNGGIFEVCW--NKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~-~~~~~i~~~~w--s~~g~~la~~~~~~~v~v~~~ 500 (502)
.|.+++|+ |++||+++ +++|++|++.+++..... .+...+++++| +|+|..|++++.+|+ +||.+
T Consensus 228 ~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~ 295 (588)
T 2j04_A 228 KITDLKIV--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLE 295 (588)
T ss_dssp CCCCEEEE--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEES
T ss_pred cEEEEEEE--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEee
Confidence 99999999 68999998 699999999988874333 44456999999 999999999999999 99976
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-32 Score=267.51 Aligned_cols=235 Identities=9% Similarity=0.054 Sum_probs=193.6
Q ss_pred EECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccC
Q 010759 220 DWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 220 ~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
.+.+++.+|++|+.||.|++|+... .....+. ...|.++.|+|. +++|+.|++|++|+...
T Consensus 43 ~~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~------------- 104 (343)
T 3lrv_A 43 SMYYDKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGN------------- 104 (343)
T ss_dssp SSSEEEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTT-------------
T ss_pred hhcCCCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccC-------------
Confidence 3456889999999999999999764 3444444 467788889988 99999999999998754
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
.+.+|+......+..+. +|.+.|.+++|+| ++++|++|+.||+|++||+++++.+..+
T Consensus 105 -------------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~ 165 (343)
T 3lrv_A 105 -------------------QITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVH 165 (343)
T ss_dssp -------------------EEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEE
T ss_pred -------------------ceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEE
Confidence 24556666666555444 7788999999999 9999999999999999999999887655
Q ss_pred c-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE-EEeeC-CCCCEEEEEECCCCCEEEEEeCCC
Q 010759 376 R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL-YSLNG-HREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 376 ~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~-h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
. .+...+.+++|+|++. +|++|+.||.|++||+++++.+ ..+.+ |..+|++|+|+|+|.+|++++ |+
T Consensus 166 ~~~~~~~i~~~~~~pdg~---------~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~ 235 (343)
T 3lrv_A 166 SAKSDVEYSSGVLHKDSL---------LLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQ 235 (343)
T ss_dssp CCCSSCCCCEEEECTTSC---------EEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SS
T ss_pred ecCCCCceEEEEECCCCC---------EEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CC
Confidence 3 3455799999999986 8999999999999999999887 78888 999999999999999999999 55
Q ss_pred cEEEEeCCCCeeEEEEec---C-CCE--EEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 453 SMHIWSLKEGKIVKTYTG---N-GGI--FEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 453 ~i~iw~~~~~~~~~~~~~---~-~~i--~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
.|++||+++++.+..+.. + ..+ .+++|+|+|++||+|+. ++.|.||++.
T Consensus 236 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~ 291 (343)
T 3lrv_A 236 TVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFD 291 (343)
T ss_dssp BEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEEEEcCCCCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEc
Confidence 999999998876554432 1 122 46999999999999999 9999999873
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=7.9e-30 Score=251.74 Aligned_cols=273 Identities=12% Similarity=0.136 Sum_probs=219.5
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE-EEEECCCcEEEEECCC-
Q 010759 167 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL-ATGSYDGQARIWSTNG- 244 (502)
Q Consensus 167 ~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l-~sg~~dg~i~iw~~~~- 244 (502)
.++++++.|+.|++||+.++.. +..+.. ...+.+++|+|+++++ ++++.|+.|++|+...
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~-------------~~~~~~-----~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~ 64 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKV-------------TATIPV-----GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATN 64 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEE-------------EEEEEC-----SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTT
T ss_pred EEEEEcCCCCEEEEEECCCCeE-------------EEEeec-----CCCcceEEECCCCCEEEEECCCCCeEEEEECCCC
Confidence 4688899999999999876531 112221 2458999999999976 6777999999999864
Q ss_pred ceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc--eEEEEcCCCeEEE
Q 010759 245 DLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV--SFATSSTDNMIYV 321 (502)
Q Consensus 245 ~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~~ 321 (502)
.....+..+. .+.+++|+|++++|+ +++.++.|++||+.+++....+..+. .+..+.|..+. .+++++.++.|++
T Consensus 65 ~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~ 142 (391)
T 1l0q_A 65 NVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSV 142 (391)
T ss_dssp EEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEE
Confidence 4444555444 899999999999875 56677999999999998877776544 56777886543 3467888999999
Q ss_pred EEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCc
Q 010759 322 CKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQ 400 (502)
Q Consensus 322 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~ 400 (502)
|++.+++.+..+..|. .+.+++|+|+++++ ++++.++.|++||+.+++.+..+. +...+.+++|+|++.
T Consensus 143 ~d~~~~~~~~~~~~~~-~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~-------- 212 (391)
T 1l0q_A 143 INTVTKAVINTVSVGR-SPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGT-------- 212 (391)
T ss_dssp EETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSS--------
T ss_pred EECCCCcEEEEEecCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCC--------
Confidence 9999988888777654 56899999999877 678889999999999988776665 456789999999986
Q ss_pred EEEEEEe---CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeeEEEEecC
Q 010759 401 LILASAS---FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 401 ~~l~sgs---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
+|++++ .++.|++||+.+++.+..+..|. .+.+++|+|+|++| ++++.|+.|++||+.+++++..+...
T Consensus 213 -~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 213 -KAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp -EEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS
T ss_pred -EEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEEECC
Confidence 455555 78999999999999998888765 57999999999987 67788999999999999998887543
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.6e-31 Score=264.83 Aligned_cols=237 Identities=14% Similarity=0.126 Sum_probs=199.6
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECC-Cc---eeEeec--------------------------------------
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTN-GD---LKCTLS-------------------------------------- 251 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~-~~---~~~~~~-------------------------------------- 251 (502)
.++.+++|+++|++|+++ .++.|++|++. +. ....+.
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred ccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 468999999999966655 57899999964 33 222222
Q ss_pred ----------------CCCCCEEEEEecCCCCEE-EEecCCCeEEEEecc--CcceeEEeeecccCeEEEecCCCceEEE
Q 010759 252 ----------------KHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVK--TEEWKQQFEFHSGPTLDVDWRNNVSFAT 312 (502)
Q Consensus 252 ----------------~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (502)
.|.+.|++++|+|++++| ++|+.|++|++||+. ++.....+..
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~------------------ 145 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKR------------------ 145 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE------------------
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeec------------------
Confidence 344579999999999996 899999999999987 6554332211
Q ss_pred EcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee----ecccCCCcEEEEEEc
Q 010759 313 SSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH----DLREHSKEIYTIRWS 388 (502)
Q Consensus 313 ~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~----~~~~~~~~i~~~~~s 388 (502)
..|...|.+++|+|++++|++|+.+|.|++|++.++.... .+..|...|.+++|+
T Consensus 146 ---------------------~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 204 (450)
T 2vdu_B 146 ---------------------FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLI 204 (450)
T ss_dssp ---------------------EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEE
T ss_pred ---------------------ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEc
Confidence 1356779999999999999999999999999998776544 777899999999999
Q ss_pred cC---CCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 389 PT---GSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 389 p~---g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
|+ +. +|++|+.|+.|++||+.+++.+.. +.+|...|++++|+ ++++|++|+.|+.|++||+.+++.
T Consensus 205 p~~~~~~---------~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 205 KDSDGHQ---------FIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKN 274 (450)
T ss_dssp ECTTSCE---------EEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCE
T ss_pred CCCCCCc---------EEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 98 64 789999999999999999988877 66899999999999 999999999999999999999998
Q ss_pred EEEEec--------------------------CCCEEEEEECCCCCEEEEEE-CCCeEEEEEe
Q 010759 465 VKTYTG--------------------------NGGIFEVCWNKEGDKIAACF-ANHTVCVLDF 500 (502)
Q Consensus 465 ~~~~~~--------------------------~~~i~~~~ws~~g~~la~~~-~~~~v~v~~~ 500 (502)
+..+.. ...+.+++|+|+|++|++++ .++.|.||++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 275 LSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 877752 23588999999999999999 8999999998
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=1.9e-30 Score=243.12 Aligned_cols=273 Identities=14% Similarity=0.147 Sum_probs=186.3
Q ss_pred CeEEEEECCCCC---EEEEEECCCcEEEEECCC----ceeEeecCCCCCEEEEEecCCCC----------------EEEE
Q 010759 215 DVTTLDWNGEGT---LLATGSYDGQARIWSTNG----DLKCTLSKHKGPIFSLKWNKKGD----------------YLLT 271 (502)
Q Consensus 215 ~V~~l~~s~~~~---~l~sg~~dg~i~iw~~~~----~~~~~~~~h~~~V~~l~~~~~~~----------------~l~s 271 (502)
.|.++-|-..|- .+++++ ...|++|+... +...+...|..+|..+.+.|+.. .|+.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~-~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~ 119 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITAC-EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFC 119 (356)
T ss_dssp EEEEEEEC----CEEEEEEEE-SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC
T ss_pred EEeeeeeccCCCCccEEEEec-cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEE
Confidence 466777766543 455555 57999999754 35567777777777666666321 1111
Q ss_pred ecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEc---CCCeEEEEEcCC-CcceeeecCCCcceeEEEEcC
Q 010759 272 GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSS---TDNMIYVCKIGE-NRPIKTFAGHQGEVNCVKWDP 347 (502)
Q Consensus 272 gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~~~~~~~-~~~~~~~~~h~~~v~~v~~~p 347 (502)
+..|+++..|.+..+. ...+..+ ....++.++ .|+.|++|++.. ++.+..+.+|...+..++|+|
T Consensus 120 spd~~~~~~~l~s~g~--------~~~v~~l---~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~ 188 (356)
T 2w18_A 120 SSDDESEKQVLLKSGN--------IKAVLGL---TKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAE 188 (356)
T ss_dssp ------CCEEEEEEEE--------EEEEEEE---TTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEE
T ss_pred CCCccccccEEEeCCC--------eEEEEec---CCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeec
Confidence 2222222222221111 1111111 223344443 489999999954 677778889999999999999
Q ss_pred ---CCCEEEEEeCCCcEEEEeCCCCceeeecccCC---CcEEEEEEccCCCCC---CCCCCcEEEEEEeCCCeEEEEeCC
Q 010759 348 ---TGSLLASCSDDVTAKIWNMKQDKYVHDLREHS---KEIYTIRWSPTGSGT---NNPNQQLILASASFDSTVKLWDVE 418 (502)
Q Consensus 348 ---~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~---~~i~~~~~sp~g~~~---~~~~~~~~l~sgs~dg~i~iwd~~ 418 (502)
++.+|++|+.|++|+|||++++++++++..|. ..+.+++|+|+|... .++.....+++|+.|++|++||..
T Consensus 189 ~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~ 268 (356)
T 2w18_A 189 VQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPK 268 (356)
T ss_dssp EETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETT
T ss_pred cCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECC
Confidence 78999999999999999999999999997654 357778999988521 011111235789999999999999
Q ss_pred CCeEEEEe-----eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEE-EEEECCCCCEEEEEEC
Q 010759 419 LGKLLYSL-----NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIF-EVCWNKEGDKIAACFA 491 (502)
Q Consensus 419 ~~~~~~~~-----~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~-~~~ws~~g~~la~~~~ 491 (502)
+++.+..+ .+|...+.+..++ +.++|+|+.|++|+|||+.+|+.++++.++. .+. .++|||||++||+|+.
T Consensus 269 tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~ 346 (356)
T 2w18_A 269 TTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAGQK 346 (356)
T ss_dssp TTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEECT
T ss_pred CCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEEEC
Confidence 99987765 4776666555554 8899999999999999999999999998654 344 6899999999999999
Q ss_pred CCeEEEEEee
Q 010759 492 NHTVCVLDFR 501 (502)
Q Consensus 492 ~~~v~v~~~~ 501 (502)
|++|+|||+.
T Consensus 347 D~TIklWd~~ 356 (356)
T 2w18_A 347 DGNIFVYHYS 356 (356)
T ss_dssp TSCEEEEEEC
T ss_pred CCcEEEecCC
Confidence 9999999974
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=100.00 E-value=1e-29 Score=251.01 Aligned_cols=263 Identities=13% Similarity=0.118 Sum_probs=221.6
Q ss_pred CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 226 TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
.++++++.|+.|++|+... .....+..| ..+.+++|+|++.++ ++++.|++|++||+.+++....+..+. .+..+.
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~ 80 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVA 80 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecC-CCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceE
Confidence 4678899999999999875 444556655 458999999999976 678899999999999999888877665 778888
Q ss_pred cCCCc--eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCceeeecccCCC
Q 010759 304 WRNNV--SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKYVHDLREHSK 380 (502)
Q Consensus 304 ~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~~~~~~~~~~~~~ 380 (502)
|..+. .+++++.++.|++|++..++.+..+..| ..+.+++|+|+++++ ++++.++.|++||+.+++.+..+..+ .
T Consensus 81 ~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~-~ 158 (391)
T 1l0q_A 81 VSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-KSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVG-R 158 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred ECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecC-C
Confidence 86543 3456667899999999998888777654 467999999999977 78888999999999999888777655 4
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEe---CCCcEEEE
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGS---LDKSMHIW 457 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs---~Dg~i~iw 457 (502)
.+..++|+|++. .++++++.++.|++||+++++.+..+. +...+.+++|+|+|++|++++ .++.|++|
T Consensus 159 ~~~~~~~~~dg~--------~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~ 229 (391)
T 1l0q_A 159 SPKGIAVTPDGT--------KVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMI 229 (391)
T ss_dssp SEEEEEECTTSS--------EEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEEEEEECTTSSEEEEEEECSSCCEEEEE
T ss_pred CcceEEECCCCC--------EEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCccceEECCCCCEEEEEecCcCCCcEEEE
Confidence 568999999885 355788899999999999999887776 456789999999999999888 68999999
Q ss_pred eCCCCeeEEEEecCCCEEEEEECCCCCEE-EEEECCCeEEEEEee
Q 010759 458 SLKEGKIVKTYTGNGGIFEVCWNKEGDKI-AACFANHTVCVLDFR 501 (502)
Q Consensus 458 ~~~~~~~~~~~~~~~~i~~~~ws~~g~~l-a~~~~~~~v~v~~~~ 501 (502)
|+.+++.+..+..+..+.+++|+|+|++| ++++.++.|.|||+.
T Consensus 230 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~ 274 (391)
T 1l0q_A 230 DTGTNKITARIPVGPDPAGIAVTPDGKKVYVALSFXNTVSVIDTA 274 (391)
T ss_dssp ETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred ECCCCeEEEEEecCCCccEEEEccCCCEEEEEcCCCCEEEEEECC
Confidence 99999999988887789999999999988 566889999999974
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=100.00 E-value=3.8e-31 Score=247.86 Aligned_cols=187 Identities=17% Similarity=0.193 Sum_probs=139.5
Q ss_pred CCCEEEEEE--CCCcEEEEECC--CceeEeecCCCCCEEEEEecC---CCCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 224 EGTLLATGS--YDGQARIWSTN--GDLKCTLSKHKGPIFSLKWNK---KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 224 ~~~~l~sg~--~dg~i~iw~~~--~~~~~~~~~h~~~V~~l~~~~---~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+|+++.+++ .|+.|++|++. ++....+.+|...++.++|++ ++.+|++||.|++|+|||+.+++++.++..|.
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~ 223 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDD 223 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC
T ss_pred CCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCC
Confidence 445555533 58888888873 455667778999999999999 67899999999999999999988776654321
Q ss_pred cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE------------EEEeCCCcEEEE
Q 010759 297 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL------------ASCSDDVTAKIW 364 (502)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l------------~sgs~dg~i~iw 364 (502)
. +...+.+++|+|+|.++ ++|+.|++|++|
T Consensus 224 ~--------------------------------------~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 224 S--------------------------------------YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp -----------------------------------------CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred c--------------------------------------ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 1 11245566777777665 678899999999
Q ss_pred eCCCCceeeec-----ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEE-EEEE
Q 010759 365 NMKQDKYVHDL-----REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVY-SLAF 438 (502)
Q Consensus 365 d~~~~~~~~~~-----~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~-~l~~ 438 (502)
|..+++.+..+ .+|...+.+..++ +. ++++|+.|++|+|||+.+++++.++.+|...+. .++|
T Consensus 266 d~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~---------~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vaf 334 (356)
T 2w18_A 266 NPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DH---------CAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKW 334 (356)
T ss_dssp ETTTTEEEEEEEECCCTTCCCCEEEEEEE--TT---------EEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEE
T ss_pred ECCCCEEEEEEEeeccCCCcceeEccccC--CC---------EEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEE
Confidence 99999877544 2444444433333 22 689999999999999999999999999987655 6899
Q ss_pred CCCCCEEEEEeCCCcEEEEeC
Q 010759 439 SPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~ 459 (502)
||||++||+|+.|++|+||++
T Consensus 335 SPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 335 SGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEECCCcEEEecC
Confidence 999999999999999999985
No 126
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=100.00 E-value=1.2e-29 Score=254.05 Aligned_cols=286 Identities=13% Similarity=0.105 Sum_probs=228.6
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeee-cccccCCCCeEEEEECCCCCE
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRTNEKSKDVTTLDWNGEGTL 227 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~l~~s~~~~~ 227 (502)
.+..| ..+.+++|+|++.++++++.|+.|++||+.++... .... .....|...|.+++|++++.+
T Consensus 118 ~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~ 183 (433)
T 3bws_A 118 RFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTV-------------RLSPPEKYKKKLGFVETISIPEHNEL 183 (433)
T ss_dssp EEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEE-------------EECCCHHHHTTCCEEEEEEEGGGTEE
T ss_pred EEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEe-------------eecCcccccccCCceeEEEEcCCCEE
Confidence 34434 44679999998888899999999999998876421 1111 122356678999999999999
Q ss_pred EEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 228 LATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
+++++.|+.|++|+... .....+..|...+.+++|+|++.+++ +++.|+.|++||+++++....+..+. .+..+.|.
T Consensus 184 ~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~ 262 (433)
T 3bws_A 184 WVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG-LPRGLLLS 262 (433)
T ss_dssp EEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS-EEEEEEEC
T ss_pred EEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC-CceEEEEc
Confidence 99999999999999865 55667778999999999999999875 56689999999999998877766543 36777776
Q ss_pred CCc-eEEEEc--------CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeec
Q 010759 306 NNV-SFATSS--------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 306 ~~~-~~~~~~--------~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
.+. .+++++ .|+.|++|++..++.+..+ .|...+.+++|+|+++ ++++++.|+.|++||+.+++.+..+
T Consensus 263 ~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~~~~~~~~ 341 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKEKKVQKSI 341 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCCCcEEEEe
Confidence 443 555554 5889999999888766554 4566889999999997 4577789999999999998887766
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---------------CCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASF---------------DSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---------------dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
. +...+.+++|+|++. +|++++. ||.|++||+.+++.+..+.. ...+.+++|+|
T Consensus 342 ~-~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~ 410 (433)
T 3bws_A 342 P-VFDKPNTIALSPDGK---------YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSP 410 (433)
T ss_dssp E-CSSSEEEEEECTTSS---------EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEEC-SSSEEEEEECT
T ss_pred c-CCCCCCeEEEcCCCC---------EEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecC-CCCCceEEEcC
Confidence 5 667899999999986 4555554 57999999999999988886 45799999999
Q ss_pred CCCEEEEEeC-CCcEEEEeCCC
Q 010759 441 TGEYLASGSL-DKSMHIWSLKE 461 (502)
Q Consensus 441 dg~~lasgs~-Dg~i~iw~~~~ 461 (502)
+|++|++++. |+.|++|++..
T Consensus 411 dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 411 DNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp TSCEEEEEETTTTEEEEEEETT
T ss_pred CCCEEEEEECCCCeEEEEEecC
Confidence 9999998875 99999999863
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.97 E-value=5e-29 Score=255.71 Aligned_cols=312 Identities=12% Similarity=0.105 Sum_probs=242.4
Q ss_pred EECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEE
Q 010759 161 AWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIW 240 (502)
Q Consensus 161 ~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw 240 (502)
+|+|++.++++++.|++|.+||..++... ..+.. + ..+..++|+|+|++|++++.|+.|++|
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~-------------~~i~~---g--~~~~~v~~spdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIV-------------KVIDT---G--YAVHISRMSASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEE-------------EEEEC---S--TTEEEEEECTTSCEEEEEETTSEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEE-------------EEEec---C--cccceEEECCCCCEEEEECCCCeEEEE
Confidence 38999999999999999999998776421 22221 1 128899999999999999999999999
Q ss_pred EC--C-CceeEeecCCCCCEEEEEecC----CCCEEEEec-CCCeEEEEeccCcceeEEeeec----------cc-CeEE
Q 010759 241 ST--N-GDLKCTLSKHKGPIFSLKWNK----KGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFH----------SG-PTLD 301 (502)
Q Consensus 241 ~~--~-~~~~~~~~~h~~~V~~l~~~~----~~~~l~sgs-~D~~v~iwd~~~~~~~~~~~~~----------~~-~~~~ 301 (502)
|+ . +.....+. +...+..++|+| +|+++++++ .+++|.+||..+++.+..+..+ .. .+..
T Consensus 206 D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~ 284 (543)
T 1nir_A 206 DLWAKEPTKVAEIK-IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAA 284 (543)
T ss_dssp ETTSSSCEEEEEEE-CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEE
T ss_pred ECcCCCCcEEEEEe-cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEE
Confidence 99 4 34445555 445679999999 999999887 4899999999999988877642 22 4555
Q ss_pred EecC--CCceEEEEcCCCeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEE-EeCCCcEEEEeCCCCceeeecc
Q 010759 302 VDWR--NNVSFATSSTDNMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 302 ~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~s-gs~dg~i~iwd~~~~~~~~~~~ 376 (502)
+.+. ....+++...++.|.+|++...+.+. .+ .+...+..+.|+|+|++|++ +..+++|.+||+.+++++..+.
T Consensus 285 i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 285 IIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp EEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred EEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 6554 34456677889999999998765443 33 35566888999999997655 4568999999999999887765
Q ss_pred c----CCCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-------CeEEEEeeCCCCCEEEEEECCCCCE
Q 010759 377 E----HSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-------GKLLYSLNGHREPVYSLAFSPTGEY 444 (502)
Q Consensus 377 ~----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~spdg~~ 444 (502)
. |......+ ++|++. .++++++ .|++|.+||+.+ ++++.++.+|...+..|+|||+|++
T Consensus 364 ~g~~ph~g~g~~~-~~p~~g--------~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 364 VGKTPHPGRGANF-VHPKYG--------PVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 434 (543)
T ss_dssp CSSSBCCTTCEEE-EETTTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred cCCCCCCCCCccc-CCCCCc--------cEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence 3 43333333 356532 3677775 689999999998 8999999999888999999999999
Q ss_pred EEEEe-------CCCcEEEEeCCCCeeE-EEE---------ecCCCEEEEEECCCCCEEEEEEC-----CCeEEEEEee
Q 010759 445 LASGS-------LDKSMHIWSLKEGKIV-KTY---------TGNGGIFEVCWNKEGDKIAACFA-----NHTVCVLDFR 501 (502)
Q Consensus 445 lasgs-------~Dg~i~iw~~~~~~~~-~~~---------~~~~~i~~~~ws~~g~~la~~~~-----~~~v~v~~~~ 501 (502)
|++++ .+++|.+||+.+++.+ ..+ .+...+..++|+|+|+.|+++.. ++.|.|||.+
T Consensus 435 l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~ 513 (543)
T 1nir_A 435 LYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDK 513 (543)
T ss_dssp EEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETT
T ss_pred EEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECC
Confidence 99987 2779999999998876 444 22346899999999999987743 6899999864
No 128
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.97 E-value=1.8e-28 Score=262.67 Aligned_cols=334 Identities=15% Similarity=0.141 Sum_probs=239.9
Q ss_pred ccceeEEEECCCCCEEEEEeC-CC-----cEEEEecCCCCCCCCCCCCCce----EEEE--Eeeecccc-cCCCCeEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSG-DS-----TARIWTIADGTSNGGAQNGPLN----VLVL--KHVKGRTN-EKSKDVTTLD 220 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~-D~-----~i~iW~~~~~~~~~~~~~~~~~----~~~~--~~~~~~~~-~~~~~V~~l~ 220 (502)
...|.+++|||||++|++++. |+ .|++||+.++............ .+.. +....... .....|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 346899999999999999998 88 8999999876421100000000 0000 00000000 0002378899
Q ss_pred ECCCCCEEEEEECCCcEEEEECCCc---eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc
Q 010759 221 WNGEGTLLATGSYDGQARIWSTNGD---LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 221 ~s~~~~~l~sg~~dg~i~iw~~~~~---~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
|||||++|++++. +.|++|+..+. ....+..|...+..++|+|+|++|+.++ ++.|++||+.+++.......+..
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~ 193 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTADGST 193 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCCCCS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccCCcc
Confidence 9999999999887 99999999876 6667788888999999999999999887 56999999998876554433322
Q ss_pred C----------------eEEEecCCC-ceEEEEcCCC---------------------------------eEEEEEcCC-
Q 010759 298 P----------------TLDVDWRNN-VSFATSSTDN---------------------------------MIYVCKIGE- 326 (502)
Q Consensus 298 ~----------------~~~~~~~~~-~~~~~~~~d~---------------------------------~i~~~~~~~- 326 (502)
. +..+.|.++ ..++.++.|+ .|++|++.+
T Consensus 194 ~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~ 273 (741)
T 2ecf_A 194 TIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQ 273 (741)
T ss_dssp SEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTT
T ss_pred ceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCC
Confidence 1 355677644 3455554443 788889887
Q ss_pred Ccceeeec--CCCcceeEEEEcCCCCEEEEEeC-----CCcEEEEeCCCCceeeecccCCC----cEEEEEEccCCCCCC
Q 010759 327 NRPIKTFA--GHQGEVNCVKWDPTGSLLASCSD-----DVTAKIWNMKQDKYVHDLREHSK----EIYTIRWSPTGSGTN 395 (502)
Q Consensus 327 ~~~~~~~~--~h~~~v~~v~~~p~~~~l~sgs~-----dg~i~iwd~~~~~~~~~~~~~~~----~i~~~~~sp~g~~~~ 395 (502)
++...... .|...+..++| |||++|++++. +..|++||+.+++....+..+.. .+..++|+|+|.
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~--- 349 (741)
T 2ecf_A 274 AQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS--- 349 (741)
T ss_dssp CCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC---
T ss_pred CceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe---
Confidence 66554433 47788999999 99999887654 56899999999887665554433 345789999885
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEEE-EECCCCCEEEE-EeCCC--cEEEEeCCC-CeeEEEEe
Q 010759 396 NPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSL-AFSPTGEYLAS-GSLDK--SMHIWSLKE-GKIVKTYT 469 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l-~~spdg~~las-gs~Dg--~i~iw~~~~-~~~~~~~~ 469 (502)
++++++.||.++||.+. .+. ...+..|...|..+ .|+|+|++|+. ++.++ .++||++.. +..+..+.
T Consensus 350 ------~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~~~~~l~ 422 (741)
T 2ecf_A 350 ------ILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGGQPQRLS 422 (741)
T ss_dssp ------EEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCCCCEECC
T ss_pred ------EEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCCCeeecc
Confidence 67888899988888765 345 77888888889887 59999997754 55555 899999864 56566666
Q ss_pred cCCCEEEEEECCCCCEEEEEECC----CeEEEEEe
Q 010759 470 GNGGIFEVCWNKEGDKIAACFAN----HTVCVLDF 500 (502)
Q Consensus 470 ~~~~i~~~~ws~~g~~la~~~~~----~~v~v~~~ 500 (502)
....+..++|+|||++||....+ ..+.+++.
T Consensus 423 ~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~ 457 (741)
T 2ecf_A 423 KAPGMHSASFARNASVYVDSWSNNSTPPQIELFRA 457 (741)
T ss_dssp CSCSEEEEEECTTSSEEEEEEEETTEEEEEEEEET
T ss_pred cCCCceEEEECCCCCEEEEEecCCCCCCeEEEEEc
Confidence 66778999999999998877554 35667663
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.97 E-value=1.4e-28 Score=244.68 Aligned_cols=302 Identities=15% Similarity=0.156 Sum_probs=226.3
Q ss_pred cccceeEEEECCCCC-EEEEEe----CCC----cEEEEec--CCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 153 HTSEVCACAWSPAGS-LLASGS----GDS----TARIWTI--ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 153 H~~~V~~~~~spd~~-~l~sgs----~D~----~i~iW~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+...|+..+|++.|. ++++|+ .|| +++|||+ .++... ....+.+ +...+..+++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~-----------~~~~~~~----~~~~~~~~~~ 125 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVL-----------AQNSYKV----NKQWLRYAGH 125 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEE-----------EEEEEEE----CGGGHHHHHH
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEE-----------eeeEEEc----ChhHHHHHHH
Confidence 345688888999875 666887 567 8999999 765421 0011111 2233444444
Q ss_pred CC--------------CCCEEEEEECC------CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCC---eE
Q 010759 222 NG--------------EGTLLATGSYD------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TA 278 (502)
Q Consensus 222 s~--------------~~~~l~sg~~d------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~---~v 278 (502)
++ .+..++.++.+ +.|++||..+.....+.+|...|.+++|+|+|++|++++.++ .|
T Consensus 126 ~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i 205 (415)
T 2hqs_A 126 TASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSAL 205 (415)
T ss_dssp HHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEE
T ss_pred HHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEE
Confidence 42 25566665554 799999998877778888999999999999999999999885 99
Q ss_pred EEEeccCcceeEEeeecccCeEEEecCCCce-EE-EEcCCC--eEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEE
Q 010759 279 IVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS-FA-TSSTDN--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 354 (502)
Q Consensus 279 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~d~--~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 354 (502)
++||+.+++.. .+..+...+..+.|.++.. ++ +++.++ .|++|++.+++. ..+..|...+.+++|+|||++|++
T Consensus 206 ~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~ 283 (415)
T 2hqs_A 206 VIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAF 283 (415)
T ss_dssp EEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEE
Confidence 99999998865 4555667788899976543 44 555544 599999987665 567788889999999999999888
Q ss_pred EeC-CC--cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC---CeEEEEeCCCCeEEEEeeC
Q 010759 355 CSD-DV--TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD---STVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 355 gs~-dg--~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d---g~i~iwd~~~~~~~~~~~~ 428 (502)
++. ++ .|.+||+.++.. ..+..+...+.+++|+|+|. +|++++.+ ..|++||+.+++.. .+..
T Consensus 284 ~s~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~---------~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~ 352 (415)
T 2hqs_A 284 TSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSDGK---------FMVMVSSNGGQQHIAKQDLATGGVQ-VLSS 352 (415)
T ss_dssp EECTTSSCEEEEEETTSSCC-EECCCSSSEEEEEEECTTSS---------EEEEEEECSSCEEEEEEETTTCCEE-ECCC
T ss_pred EECCCCCcEEEEEECCCCCE-EEEecCCCcccCeEECCCCC---------EEEEEECcCCceEEEEEECCCCCEE-EecC
Confidence 876 45 677779887764 34555667889999999986 55555543 58999999988774 5665
Q ss_pred CCCCEEEEEECCCCCEEEEEeCCC---cEEEEeCCCCeeEEEEec-CCCEEEEEECCCCC
Q 010759 429 HREPVYSLAFSPTGEYLASGSLDK---SMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGD 484 (502)
Q Consensus 429 h~~~v~~l~~spdg~~lasgs~Dg---~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~ 484 (502)
|. .+.+++|+|+|++|++++.++ .|++|++..+. +..+.. .+.|.+++|+|.-.
T Consensus 353 ~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~~-~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 353 TF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRF-KARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp SS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSCC-EEECCCSSSEEEEEEECCCCC
T ss_pred CC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCCc-EEEeeCCCCCCcCCccccccc
Confidence 64 899999999999999988877 79999987544 455554 56799999999753
No 130
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=9.8e-27 Score=258.03 Aligned_cols=322 Identities=11% Similarity=0.083 Sum_probs=236.7
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCC------CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCe--
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGD------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDV-- 216 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D------~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-- 216 (502)
.....|.+|...|.+++|||||++||+++.+ ..|++|++.++.. +.+. .+...+
T Consensus 43 g~~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~~~d~~~g~~--------------~~lt----~~~~~~~~ 104 (1045)
T 1k32_A 43 GSTRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEI--------------KRIT----YFSGKSTG 104 (1045)
T ss_dssp CCEEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEE--------------EECC----CCCEEEET
T ss_pred CcEEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEEEEECCCCCe--------------EEcc----cCCCcccc
Confidence 3456778899999999999999999988653 4799999876531 1111 123334
Q ss_pred -----EEEEECCCCCEEEEEECC------CcEEEEECCCcee--------------------------------------
Q 010759 217 -----TTLDWNGEGTLLATGSYD------GQARIWSTNGDLK-------------------------------------- 247 (502)
Q Consensus 217 -----~~l~~s~~~~~l~sg~~d------g~i~iw~~~~~~~-------------------------------------- 247 (502)
..++|+|||+++++++.+ ..|++|+..+...
T Consensus 105 ~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~~~~~~~~~~~g~~~ 184 (1045)
T 1k32_A 105 RRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNTFELPHWKGYRGGTR 184 (1045)
T ss_dssp TEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESCSCCTTSTTCCSTTC
T ss_pred cccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccCCCccccccccCCCc
Confidence 899999999977887754 3567776543221
Q ss_pred ------------EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC-cceeEEeeecccCeEEEecCCCc-eEEEE
Q 010759 248 ------------CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNV-SFATS 313 (502)
Q Consensus 248 ------------~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 313 (502)
..+.+|...+.++.|+++ ..+++++.|+++++|.+.. +.....+..+.. +....|..+. .++.+
T Consensus 185 ~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~-~~~~~~SpDG~~la~~ 262 (1045)
T 1k32_A 185 GKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTD-YYPRHLNTDGRRILFS 262 (1045)
T ss_dssp CEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCS-SCEEEEEESSSCEEEE
T ss_pred CCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCC-cceeeEcCCCCEEEEE
Confidence 122456777888889887 5667788889999997653 223333333332 3334554333 34444
Q ss_pred cCCCeEEEEEcCCCcceeeecC-----------CCcceeEEEEc-CCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC-
Q 010759 314 STDNMIYVCKIGENRPIKTFAG-----------HQGEVNCVKWD-PTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK- 380 (502)
Q Consensus 314 ~~d~~i~~~~~~~~~~~~~~~~-----------h~~~v~~v~~~-p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~- 380 (502)
.++.|++|+... ..+..+.+ |...+.+++|+ |+|++|++++ ++.|.+|+...+.... +..+..
T Consensus 263 -~~~~i~~~d~~~-~~l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-~~~~~~~ 338 (1045)
T 1k32_A 263 -KGGSIYIFNPDT-EKIEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-VPEPLRI 338 (1045)
T ss_dssp -ETTEEEEECTTT-CCEEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-CSCCSCE
T ss_pred -eCCEEEEecCCc-eEeeeeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-ccCCCcc
Confidence 588999999843 33434444 34578999999 9999999888 7899999998776543 556666
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE-EEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVK-LWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~-iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
.+..++|+ +|. .|++++.++.|. +||+..++.. .+.+|...+..++|||||++||+++.++.|++||+
T Consensus 339 ~~~~~~~s-dg~---------~l~~~s~~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 339 RYVRRGGD-TKV---------AFIHGTREGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp EEEEECSS-SEE---------EEEEEETTEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred eEEeeeEc-CCC---------eEEEEECCCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEEC
Confidence 88999999 875 577777788888 9999877654 44478889999999999999999999999999999
Q ss_pred CCCeeEEEEec-CCCEEEEEECCCCCEEEEEECCC----------eEEEEEee
Q 010759 460 KEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFANH----------TVCVLDFR 501 (502)
Q Consensus 460 ~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~~~----------~v~v~~~~ 501 (502)
.+++......+ .+.+.+++|||||++||+++.++ .|++||+.
T Consensus 408 ~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~ 460 (1045)
T 1k32_A 408 ETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDME 460 (1045)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETT
T ss_pred CCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECC
Confidence 99988777744 45678999999999999887654 89999864
No 131
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.96 E-value=1.6e-26 Score=256.30 Aligned_cols=337 Identities=13% Similarity=0.126 Sum_probs=249.7
Q ss_pred ceeeccccccce-------eEEEECCCCCEEEEEeCC------CcEEEEecCCCCCCCCCCC------------------
Q 010759 146 DVTILEGHTSEV-------CACAWSPAGSLLASGSGD------STARIWTIADGTSNGGAQN------------------ 194 (502)
Q Consensus 146 ~~~~l~~H~~~V-------~~~~~spd~~~l~sgs~D------~~i~iW~~~~~~~~~~~~~------------------ 194 (502)
....|.+|...+ .+++|||||+++++++.+ ..|.+|++.++........
T Consensus 91 ~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG~l~~~~~~ 170 (1045)
T 1k32_A 91 EIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADGRRVIGRNT 170 (1045)
T ss_dssp EEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETTEEEEEESC
T ss_pred CeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCCEEEEeccC
Confidence 356788898888 999999999988888755 3577777765532110000
Q ss_pred ------------CCceEEEEEe--eecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECC--CceeEeecCCCCCEE
Q 010759 195 ------------GPLNVLVLKH--VKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN--GDLKCTLSKHKGPIF 258 (502)
Q Consensus 195 ------------~~~~~~~~~~--~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~--~~~~~~~~~h~~~V~ 258 (502)
....++.... .......+...+.++.|+++ .++++++.++.++||... +.....+..|. .+.
T Consensus 171 ~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~-~~~ 248 (1045)
T 1k32_A 171 FELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFT-DYY 248 (1045)
T ss_dssp SCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCC-SSC
T ss_pred CCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCC-Ccc
Confidence 0000110000 00011345678999999998 777788889999999753 44455565565 456
Q ss_pred EEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee-----------cccCeEEEecC-CCce-EEEEcCCCeEEEEEcC
Q 010759 259 SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-----------HSGPTLDVDWR-NNVS-FATSSTDNMIYVCKIG 325 (502)
Q Consensus 259 ~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-----------~~~~~~~~~~~-~~~~-~~~~~~d~~i~~~~~~ 325 (502)
.++|+|+|++|+.+ .++.|++||+...... .+.. +...+..+.|. ++.. ++.++ ++.+++|+..
T Consensus 249 ~~~~SpDG~~la~~-~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~ 325 (1045)
T 1k32_A 249 PRHLNTDGRRILFS-KGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVS 325 (1045)
T ss_dssp EEEEEESSSCEEEE-ETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE-TTEEEEECTT
T ss_pred eeeEcCCCCEEEEE-eCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE-cCEEEEEcCC
Confidence 77999999988887 5899999999554433 3332 23346677787 6544 44444 7899999987
Q ss_pred CCcceeeecCCCc-ceeEEEEcCCCCEEEEEeCCCcEE-EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEE
Q 010759 326 ENRPIKTFAGHQG-EVNCVKWDPTGSLLASCSDDVTAK-IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLIL 403 (502)
Q Consensus 326 ~~~~~~~~~~h~~-~v~~v~~~p~~~~l~sgs~dg~i~-iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l 403 (502)
..... .+..|.+ .+.+++|+ +|+.|++++.++.+. +|++.++.... +..+...+..++|+|+|. +|
T Consensus 326 ~~~~~-~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~~~~~~~~SpDG~---------~l 393 (1045)
T 1k32_A 326 GTYVL-KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLGNVFAMGVDRNGK---------FA 393 (1045)
T ss_dssp SSBEE-ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCCSEEEEEECTTSS---------EE
T ss_pred CCceE-EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE-ecCCccceeeeEECCCCC---------EE
Confidence 76543 4667777 89999999 999999999988888 99988776543 446778899999999997 78
Q ss_pred EEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC----------cEEEEeCCCCeeEEEEecCCC
Q 010759 404 ASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK----------SMHIWSLKEGKIVKTYTGNGG 473 (502)
Q Consensus 404 ~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg----------~i~iw~~~~~~~~~~~~~~~~ 473 (502)
++++.++.|++||+.+++....+.+|...|.+++|||||++|++++.++ .|++||+.+++......+...
T Consensus 394 a~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~~~~l~~~~~~ 473 (1045)
T 1k32_A 394 VVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSH 473 (1045)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSB
T ss_pred EEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCcEEEeeCCCcc
Confidence 8999999999999999998888878999999999999999999887654 899999998884333333456
Q ss_pred EEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 474 IFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 474 i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+..++|+|||++|++++.++...+|+
T Consensus 474 ~~~~~~spdG~~l~~~s~~~~~~~~~ 499 (1045)
T 1k32_A 474 DYAPAFDADSKNLYYLSYRSLDPSPD 499 (1045)
T ss_dssp EEEEEECTTSCEEEEEESCCCCCEEC
T ss_pred cCCceEcCCCCEEEEEecccCCcCcc
Confidence 88999999999999999877766665
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=4.2e-25 Score=226.59 Aligned_cols=294 Identities=14% Similarity=0.148 Sum_probs=223.4
Q ss_pred eeecc-ccccceeEEEECCCCCEEEEEeCCCcEEEEec--CCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 147 VTILE-GHTSEVCACAWSPAGSLLASGSGDSTARIWTI--ADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 147 ~~~l~-~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
+.++. +|. +++++|||||++|++++.|++|++||+ .++. .+..+. ....+..++|+|
T Consensus 172 ~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~-------------~~~~i~-----~g~~p~~va~sp 231 (543)
T 1nir_A 172 VKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPT-------------KVAEIK-----IGIEARSVESSK 231 (543)
T ss_dssp EEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCE-------------EEEEEE-----CCSEEEEEEECC
T ss_pred EEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCc-------------EEEEEe-----cCCCcceEEeCC
Confidence 44555 444 899999999999999999999999998 4432 112222 134578999999
Q ss_pred ----CCCEEEEEEC-CCcEEEEECCC-ceeEeecC----------CCC-CEEEEEecCCCCE-EEEecCCCeEEEEeccC
Q 010759 224 ----EGTLLATGSY-DGQARIWSTNG-DLKCTLSK----------HKG-PIFSLKWNKKGDY-LLTGSCDKTAIVWDVKT 285 (502)
Q Consensus 224 ----~~~~l~sg~~-dg~i~iw~~~~-~~~~~~~~----------h~~-~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~ 285 (502)
+|+++++++. +++|.+||... .....+.. |.. .+.++.++|++.. +++...+++|.+||+.+
T Consensus 232 ~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~ 311 (543)
T 1nir_A 232 FKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKD 311 (543)
T ss_dssp STTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTT
T ss_pred CcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecC
Confidence 9999999885 89999999764 34444433 223 6899999997765 56778899999999987
Q ss_pred cceeE--EeeecccCeEEEecCCCc--eEEEEcCCCeEEEEEcCCCcceeeecC----CCcceeEEEEcCC-CCEEEEEe
Q 010759 286 EEWKQ--QFEFHSGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPT-GSLLASCS 356 (502)
Q Consensus 286 ~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~~~~~~~----h~~~v~~v~~~p~-~~~l~sgs 356 (502)
.+... .+. +...+..+.|..+. .++++..++.|.+||..+++.+..+.. |.+....+ ++|+ +.++++++
T Consensus 312 ~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~ 389 (543)
T 1nir_A 312 IDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSH 389 (543)
T ss_dssp SSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEB
T ss_pred CCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEecc
Confidence 65443 222 33345566665443 345566789999999999988877763 55444333 4777 66777776
Q ss_pred -CCCcEEEEeCCC-------CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-------CCCeEEEEeCCCCe
Q 010759 357 -DDVTAKIWNMKQ-------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS-------FDSTVKLWDVELGK 421 (502)
Q Consensus 357 -~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-------~dg~i~iwd~~~~~ 421 (502)
.|++|.+||+.+ .++++++..|...+..++++|++. .|.+++ .+++|.+||+.+++
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~---------~l~v~~~~~~~~~~~~~v~v~d~~~~~ 460 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSS---------HLYVDTTFNPDARISQSVAVFDLKNLD 460 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCC---------EEEECCTTCSSHHHHTCEEEEETTCTT
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCC---------cEEEecCCCCCcccCceEEEEECCCCC
Confidence 689999999988 888999998888888999999987 566665 26799999999888
Q ss_pred EE-EEe--------eCCCCCEEEEEECCCCCEEEEEe-----CCCcEEEEeCCCCeeEEEEecC
Q 010759 422 LL-YSL--------NGHREPVYSLAFSPTGEYLASGS-----LDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 422 ~~-~~~--------~~h~~~v~~l~~spdg~~lasgs-----~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
.. ..+ ..+...+..+.|+|+|++|..+. .|+.|.|||..++++++++...
T Consensus 461 ~~~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~~ 524 (543)
T 1nir_A 461 AKYQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKDP 524 (543)
T ss_dssp SCCEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECCT
T ss_pred CCeEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecCC
Confidence 76 333 35567899999999999988663 4799999999999999998754
No 133
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.95 E-value=1.8e-25 Score=238.04 Aligned_cols=321 Identities=14% Similarity=0.167 Sum_probs=225.6
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCC-CCCCCCCceEEEEEeee-------cccccCCCCeEEEEECCCCCEE
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSN-GGAQNGPLNVLVLKHVK-------GRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~~~~V~~l~~s~~~~~l 228 (502)
+..+.|+ |..+++++.|+ | +||+.++... . .+....... +........|.+++|||+ .++
T Consensus 28 ~~~~~w~--g~~~~~~~~~~-i-~~d~~tg~~~~~-------~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~ 95 (706)
T 2z3z_A 28 VVGLQWM--GDNYVFIEGDD-L-VFNKANGKSAQT-------TRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLV 95 (706)
T ss_dssp CTTCEEE--TTEEEEEETTE-E-EEEC-------C-------EEEEHHHHHTTC-----------CCCEEEEETTT-TEE
T ss_pred CCCCcCc--CCeEEEEeCCc-E-EEECCCCcEeeE-------EeechhHhhhhccchhccccccccCceeEEECCC-CeE
Confidence 5667888 66777788888 8 9999877531 1 000000000 000011256999999999 655
Q ss_pred EEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC-----cceeEEeeecccC-----
Q 010759 229 ATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-----EEWKQQFEFHSGP----- 298 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~-----~~~~~~~~~~~~~----- 298 (502)
+.+ .++.|++|+..+.....+..+...+.+++|+|+|++|+++ .|+.|++||+.+ ++.......+...
T Consensus 96 ~~~-~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~ 173 (706)
T 2z3z_A 96 VLF-TQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQ 173 (706)
T ss_dssp EEE-ETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESS
T ss_pred EEE-ECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEccc
Confidence 555 4599999999876666666777888999999999999885 789999999998 7765544333332
Q ss_pred ---------eEEEecCCC-ceEEEEc---------------------------------CCCeEEEEEcCCCcceeeec-
Q 010759 299 ---------TLDVDWRNN-VSFATSS---------------------------------TDNMIYVCKIGENRPIKTFA- 334 (502)
Q Consensus 299 ---------~~~~~~~~~-~~~~~~~---------------------------------~d~~i~~~~~~~~~~~~~~~- 334 (502)
+..+.|.++ ..++.++ .+..|++|++.++.......
T Consensus 174 ~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~ 253 (706)
T 2z3z_A 174 AVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTG 253 (706)
T ss_dssp CCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCC
T ss_pred chhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccC
Confidence 356778654 4455554 44679999998876544432
Q ss_pred -CCCcceeEEEEcCCCCEEEEEeCCC-----cEEEEeCCCCceeeecc-c-CCC---cEEEEEEcc--CCCCCCCCCCcE
Q 010759 335 -GHQGEVNCVKWDPTGSLLASCSDDV-----TAKIWNMKQDKYVHDLR-E-HSK---EIYTIRWSP--TGSGTNNPNQQL 401 (502)
Q Consensus 335 -~h~~~v~~v~~~p~~~~l~sgs~dg-----~i~iwd~~~~~~~~~~~-~-~~~---~i~~~~~sp--~g~~~~~~~~~~ 401 (502)
.|...+.+++|+|||+.|++++.++ .|++||+.+++....+. . +.. .+..++|+| +|.
T Consensus 254 ~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~--------- 324 (706)
T 2z3z_A 254 EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ--------- 324 (706)
T ss_dssp SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE---------
T ss_pred CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE---------
Confidence 4667899999999999999888775 89999999883333322 1 111 235678999 875
Q ss_pred EEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEE-EEECCCCCEEEEEeC-CC----cEEEEeCCCCeeEEEEecCCCE
Q 010759 402 ILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYS-LAFSPTGEYLASGSL-DK----SMHIWSLKEGKIVKTYTGNGGI 474 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~-l~~spdg~~lasgs~-Dg----~i~iw~~~~~~~~~~~~~~~~i 474 (502)
++++++.||.++||.+. .+..+..+..|...+.+ ++|+|+|+.|+.++. ++ .|..|++.+++ +..+.....+
T Consensus 325 ~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~ 403 (706)
T 2z3z_A 325 FIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLTPESGM 403 (706)
T ss_dssp EEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESCCSSSE
T ss_pred EEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceeccCCCce
Confidence 77888899999999886 67778888888888887 799999998866554 44 67777777766 3444556678
Q ss_pred EEEEECCCCCEEEEEECC----CeEEEEEee
Q 010759 475 FEVCWNKEGDKIAACFAN----HTVCVLDFR 501 (502)
Q Consensus 475 ~~~~ws~~g~~la~~~~~----~~v~v~~~~ 501 (502)
.+++|+|||++|++...+ +.|.+||+.
T Consensus 404 ~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~ 434 (706)
T 2z3z_A 404 HRTQLSPDGSAIIDIFQSPTVPRKVTVTNIG 434 (706)
T ss_dssp EEEEECTTSSEEEEEEECSSCSCEEEEEESS
T ss_pred EEEEECCCCCEEEEEecCCCCCcEEEEEECC
Confidence 999999999998877544 469999864
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.95 E-value=8.2e-26 Score=224.79 Aligned_cols=272 Identities=12% Similarity=0.101 Sum_probs=210.6
Q ss_pred CeEEEEECCCCC-EEEEEE----CCC----cEEEEEC--CC-cee--EeecCCCCCEEEEEecC--------------CC
Q 010759 215 DVTTLDWNGEGT-LLATGS----YDG----QARIWST--NG-DLK--CTLSKHKGPIFSLKWNK--------------KG 266 (502)
Q Consensus 215 ~V~~l~~s~~~~-~l~sg~----~dg----~i~iw~~--~~-~~~--~~~~~h~~~V~~l~~~~--------------~~ 266 (502)
.|...+|++.|. ++++|+ .+| .++|||+ .. ... ..+.+|...+..+++++ .+
T Consensus 64 ~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~ 143 (415)
T 2hqs_A 64 EVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFR 143 (415)
T ss_dssp GCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTT
T ss_pred CcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCC
Confidence 567778888774 566776 467 8999998 53 443 35778888777777664 15
Q ss_pred CEEEEecCC------CeEEEEeccCcceeEEeeecccCeEEEecCCC-ceEEEEcCCC---eEEEEEcCCCcceeeecCC
Q 010759 267 DYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDN---MIYVCKIGENRPIKTFAGH 336 (502)
Q Consensus 267 ~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~---~i~~~~~~~~~~~~~~~~h 336 (502)
..++.++.+ ++|++||+... ....+..|...+.++.|.++ ..++.++.++ .|++|++.+++.. .+..|
T Consensus 144 ~~l~~~s~~~~~~~~~~i~i~d~~g~-~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~-~l~~~ 221 (415)
T 2hqs_A 144 TRIAYVVQTNGGQFPYELRVSDYDGY-NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR-QVASF 221 (415)
T ss_dssp CEEEEEEECSSSSCCEEEEEEETTSC-SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-EEECC
T ss_pred CEEEEEEecCCCCccceEEEEcCCCC-CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE-EeecC
Confidence 666666654 79999999754 45667778889999999755 4567776664 9999999887764 56778
Q ss_pred CcceeEEEEcCCCCEEE-EEeCCCc--EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-CC--
Q 010759 337 QGEVNCVKWDPTGSLLA-SCSDDVT--AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-DS-- 410 (502)
Q Consensus 337 ~~~v~~v~~~p~~~~l~-sgs~dg~--i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~-dg-- 410 (502)
.+.+.+++|+|||+.|+ +++.++. |++||+.+++. ..+..|...+.+++|+|+|. .|++++. ++
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~---------~l~~~s~~~g~~ 291 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQ---------NLAFTSDQAGRP 291 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSS---------EEEEEECTTSSC
T ss_pred CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCC---------EEEEEECCCCCc
Confidence 88999999999999877 6776665 99999988765 55677888899999999986 5565554 45
Q ss_pred eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC---CcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEE
Q 010759 411 TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD---KSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIA 487 (502)
Q Consensus 411 ~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D---g~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la 487 (502)
.|.+||+.+++. ..+..|...+.+++|+|+|++|++++.+ ..|++|++.+++... +.....+.+++|+|+|++|+
T Consensus 292 ~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~-l~~~~~~~~~~~spdg~~l~ 369 (415)
T 2hqs_A 292 QVYKVNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQV-LSSTFLDETPSLAPNGTMVI 369 (415)
T ss_dssp EEEEEETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEE-CCCSSSCEEEEECTTSSEEE
T ss_pred EEEEEECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEE-ecCCCCcCCeEEcCCCCEEE
Confidence 678889987764 4455677789999999999999988764 589999999887743 44444789999999999999
Q ss_pred EEECCC---eEEEEEe
Q 010759 488 ACFANH---TVCVLDF 500 (502)
Q Consensus 488 ~~~~~~---~v~v~~~ 500 (502)
+++.++ .|.+||+
T Consensus 370 ~~s~~~~~~~l~~~d~ 385 (415)
T 2hqs_A 370 YSSSQGMGSVLNLVST 385 (415)
T ss_dssp EEEEETTEEEEEEEET
T ss_pred EEEcCCCccEEEEEEC
Confidence 888776 7888885
No 135
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.94 E-value=6.4e-26 Score=242.12 Aligned_cols=313 Identities=11% Similarity=0.083 Sum_probs=217.7
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC-
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD- 234 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d- 234 (502)
.+.+++|||||+++++ +.||+|++||+.++... .....+ ......|.+++|||||++|++++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~-------------~~~~~~-~~~~~~v~~~~~SpDg~~l~~~~~~~ 82 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTST-------------VLIEGK-KIESLRAIRYEISPDREYALFSYNVE 82 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCE-------------EEECTT-TTTTTTCSEEEECTTSSEEEEEESCC
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEE-------------EEeccc-cccccccceEEECCCCCEEEEEecCc
Confidence 3677899999998877 78999999999876421 111111 0111248999999999999999875
Q ss_pred --------CcEEEEECCCceeEeec---CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe----
Q 010759 235 --------GQARIWSTNGDLKCTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT---- 299 (502)
Q Consensus 235 --------g~i~iw~~~~~~~~~~~---~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~---- 299 (502)
+.+++|++.+.....+. .|...+..++|+|+|++|+.++. +.|++||+.+++.......+...+
T Consensus 83 ~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g 161 (723)
T 1xfd_A 83 PIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNG 161 (723)
T ss_dssp CCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEE
T ss_pred cceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECc
Confidence 78889998765444343 34455889999999999998876 799999999888766554433322
Q ss_pred --------------EEEecCCCc-eEEEEcCC----------------------------------CeEEEEEcCCCcce
Q 010759 300 --------------LDVDWRNNV-SFATSSTD----------------------------------NMIYVCKIGENRPI 330 (502)
Q Consensus 300 --------------~~~~~~~~~-~~~~~~~d----------------------------------~~i~~~~~~~~~~~ 330 (502)
..+.|.++. .++.++.+ ..|++|++.++...
T Consensus 162 ~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~ 241 (723)
T 1xfd_A 162 LSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD 241 (723)
T ss_dssp ECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC
T ss_pred ccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee
Confidence 567786553 45554432 27899999887755
Q ss_pred eeecCC------CcceeEEEEcCCCCEEEEEeC----CCcEEEEeCCCCceeeecccC-CCcE----EEEEEccCCCCCC
Q 010759 331 KTFAGH------QGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDKYVHDLREH-SKEI----YTIRWSPTGSGTN 395 (502)
Q Consensus 331 ~~~~~h------~~~v~~v~~~p~~~~l~sgs~----dg~i~iwd~~~~~~~~~~~~~-~~~i----~~~~~sp~g~~~~ 395 (502)
..+..+ ...+.+++|+|||+++++.+. +..|++||+.+++....+..+ ...+ ..++|+|+|..
T Consensus 242 ~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~-- 319 (723)
T 1xfd_A 242 LEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRK-- 319 (723)
T ss_dssp EECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCS--
T ss_pred EEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCe--
Confidence 555544 667899999999999877653 357999999988876554332 2333 37899999862
Q ss_pred CCCCcEEEEEEeCCC------eEEEEe-CCCCe--EEEEeeCCCCCEEE-EEECCCCCEEEEEeCC---CcEEEEeCCCC
Q 010759 396 NPNQQLILASASFDS------TVKLWD-VELGK--LLYSLNGHREPVYS-LAFSPTGEYLASGSLD---KSMHIWSLKEG 462 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg------~i~iwd-~~~~~--~~~~~~~h~~~v~~-l~~spdg~~lasgs~D---g~i~iw~~~~~ 462 (502)
++++++..++ .|.+|| ...+. +...+..+...+.. ++|||||++|+..+.+ +.++||++...
T Consensus 320 -----l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 320 -----FFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp -----EEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred -----EEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 2333366777 577777 34443 14455544444554 6999999999866655 78999998642
Q ss_pred --eeEEEEec----CCCEEEEEECCCCCEEEEEEC
Q 010759 463 --KIVKTYTG----NGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 463 --~~~~~~~~----~~~i~~~~ws~~g~~la~~~~ 491 (502)
.....+.. ...+..++|+|||++||....
T Consensus 395 ~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~ 429 (723)
T 1xfd_A 395 GNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCE 429 (723)
T ss_dssp TTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECC
T ss_pred CCCCcceecccccCCCCeEEEEECCCCCEEEEEcc
Confidence 12333332 345789999999998887644
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.94 E-value=2.7e-23 Score=201.54 Aligned_cols=268 Identities=12% Similarity=0.133 Sum_probs=210.1
Q ss_pred CCeEEEEECCCCCEEEEEEC-------CCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEecc
Q 010759 214 KDVTTLDWNGEGTLLATGSY-------DGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVK 284 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~-------dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~ 284 (502)
..+..++|+|+|+++++++. ++.|.+||.... ....+.. ...+.+++|+|+++++ +++..++.|.+||+.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~ 119 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHN-DLKPFGATINNTTQTLWFGNTVNSAVTAIDAK 119 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEE-SSCCCSEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEec-CCCcceEEECCCCCEEEEEecCCCEEEEEeCC
Confidence 45789999999999888875 468999998654 3444433 3446789999999965 455668999999999
Q ss_pred CcceeEEeeecccC---------eEEEecCCC--ceEEEE-cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE
Q 010759 285 TEEWKQQFEFHSGP---------TLDVDWRNN--VSFATS-STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 352 (502)
Q Consensus 285 ~~~~~~~~~~~~~~---------~~~~~~~~~--~~~~~~-~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 352 (502)
+++....+..+... +..+.|..+ ..+++. +.++.|++|+..+.+.+..+..+...+.+++|+|+|+++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l 199 (353)
T 3vgz_A 120 TGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRL 199 (353)
T ss_dssp TCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEE
T ss_pred CCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEE
Confidence 99988777664322 455666433 334444 458899999999988888777566668899999999999
Q ss_pred EEEeCCCcEEEEeCCCCceeeeccc----CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC
Q 010759 353 ASCSDDVTAKIWNMKQDKYVHDLRE----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~~~~~~~~----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~ 428 (502)
++++.++.|.+||..+++.+..+.. +...+..++|+|++. .++++...++.|.+||+.+++.+..+..
T Consensus 200 ~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~--------~l~~~~~~~~~v~~~d~~~~~~~~~~~~ 271 (353)
T 3vgz_A 200 YTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQ--------RAFITDSKAAEVLVVDTRNGNILAKVAA 271 (353)
T ss_dssp EEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTT--------EEEEEESSSSEEEEEETTTCCEEEEEEC
T ss_pred EEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCC--------EEEEEeCCCCEEEEEECCCCcEEEEEEc
Confidence 9999999999999999988776654 445678899999986 3445555669999999999998887765
Q ss_pred CCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 429 HREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 429 h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
.. + ..++|+|+|++|+.++ .++.|.+||+.+++.+..+.....+.+++|+|+|++|+++..+
T Consensus 272 ~~-~-~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 272 PE-S-LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SS-C-CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred CC-C-ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 43 2 5799999999665554 6899999999999999888877788999999999977766655
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.94 E-value=2.3e-23 Score=200.48 Aligned_cols=270 Identities=11% Similarity=0.108 Sum_probs=197.5
Q ss_pred ECCCC-CEEEEEECCCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcce-eEEeeecc
Q 010759 221 WNGEG-TLLATGSYDGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEW-KQQFEFHS 296 (502)
Q Consensus 221 ~s~~~-~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~-~~~~~~~~ 296 (502)
|.+++ ..+++++.++.|++||... .....+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ...+..+.
T Consensus 5 ~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 5 FQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp --CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred EcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 44444 4577888899999999864 4445555566667 9999999997766555 89999999999987 66666666
Q ss_pred cCeEEEecCCCc-eEEEEcCC-C--eEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE-EEEEeCCCc-EEEEeCCCCc
Q 010759 297 GPTLDVDWRNNV-SFATSSTD-N--MIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDDVT-AKIWNMKQDK 370 (502)
Q Consensus 297 ~~~~~~~~~~~~-~~~~~~~d-~--~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~sgs~dg~-i~iwd~~~~~ 370 (502)
.+...+.|..+. .++++..+ + .|++|++...+.+..+..+ ....+++|+|+|++ ++++..++. |.+|++....
T Consensus 84 ~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g 162 (331)
T 3u4y_A 84 SSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIP-YDAVGIAISPNGNGLILIDRSSANTVRRFKIDADG 162 (331)
T ss_dssp SCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECC-TTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTC
T ss_pred CCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECC-CCccceEECCCCCEEEEEecCCCceEEEEEECCCC
Confidence 665547776544 34444334 3 8999999988887776644 34689999999985 455566688 9999987544
Q ss_pred eee----ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE---EEEeeCCCCCEEEEEECCCCC
Q 010759 371 YVH----DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL---LYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 371 ~~~----~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~---~~~~~~h~~~v~~l~~spdg~ 443 (502)
.+. ...........++|+|+|. .+++++..++.|++||+.+++. +..+..+ ..+..++|+|+|+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~spdg~--------~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~ 233 (331)
T 3u4y_A 163 VLFDTGQEFISGGTRPFNITFTPDGN--------FAFVANLIGNSIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGS 233 (331)
T ss_dssp CEEEEEEEEECSSSSEEEEEECTTSS--------EEEEEETTTTEEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSS
T ss_pred cEeecCCccccCCCCccceEECCCCC--------EEEEEeCCCCeEEEEECCCCcccceeeeccCC-CCCceEEECCCCC
Confidence 331 1123345678999999985 3556666789999999998887 7777744 5678999999999
Q ss_pred EEEEEe-CCCcEEEEeCCCCee--EEEEecC--------CCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 444 YLASGS-LDKSMHIWSLKEGKI--VKTYTGN--------GGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 444 ~lasgs-~Dg~i~iw~~~~~~~--~~~~~~~--------~~i~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
+|+.++ .++.|.+||+.++++ +..+... .....++|+|||++|+++.. ++.|.|||+.
T Consensus 234 ~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~ 303 (331)
T 3u4y_A 234 TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISRELKVFTIS 303 (331)
T ss_dssp EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCCcEEEEEec
Confidence 776554 578899999999887 4444322 12345899999998876654 6699999974
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.93 E-value=1.6e-24 Score=231.97 Aligned_cols=277 Identities=13% Similarity=0.107 Sum_probs=208.1
Q ss_pred CCCeEEEEECCCCCEEEEEEC-CC-----cEEEEECCCce-eEeecCCCC------------------------CEEEEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSY-DG-----QARIWSTNGDL-KCTLSKHKG------------------------PIFSLK 261 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~-dg-----~i~iw~~~~~~-~~~~~~h~~------------------------~V~~l~ 261 (502)
...|.+++|||||++|++++. |+ .|++|+..+.. ...+..+.. .|.+++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 456999999999999999998 88 89999987543 333433332 378899
Q ss_pred ecCCCCEEEEecCCCeEEEEeccCcc--eeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcc
Q 010759 262 WNKKGDYLLTGSCDKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE 339 (502)
Q Consensus 262 ~~~~~~~l~sgs~D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~ 339 (502)
|+|+|++|++++. +.|++||+.++. ....+..+...+..+.|.++...+....++.|++|++.++........+...
T Consensus 116 ~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~~~~~~~~ 194 (741)
T 2ecf_A 116 WSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQLTADGSTT 194 (741)
T ss_dssp ECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEECCCCCCSS
T ss_pred ECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEeccCCccc
Confidence 9999999998886 999999998872 2334555667788888977665444444679999999887765544444332
Q ss_pred ----------------eeEEEEcCCCCEEEEEeCCC---------------------------------cEEEEeCCC-C
Q 010759 340 ----------------VNCVKWDPTGSLLASCSDDV---------------------------------TAKIWNMKQ-D 369 (502)
Q Consensus 340 ----------------v~~v~~~p~~~~l~sgs~dg---------------------------------~i~iwd~~~-~ 369 (502)
+.+++|+|||++|++++.|+ .|.+||+.+ +
T Consensus 195 ~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~ 274 (741)
T 2ecf_A 195 IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQA 274 (741)
T ss_dssp EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTC
T ss_pred eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCC
Confidence 47899999999999988765 788999988 7
Q ss_pred ceeeecc--cCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-----CCCeEEEEeCCCCeEEEEeeCCCC----CEEEEEE
Q 010759 370 KYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASAS-----FDSTVKLWDVELGKLLYSLNGHRE----PVYSLAF 438 (502)
Q Consensus 370 ~~~~~~~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-----~dg~i~iwd~~~~~~~~~~~~h~~----~v~~l~~ 438 (502)
+...... .+...+..++| |+|. .|+.++ .+..|++||+.+++....+..+.. .+.+++|
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~-pDg~---------~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~ 344 (741)
T 2ecf_A 275 QTQWIDLGKEQDIYLARVNW-RDPQ---------HLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRF 344 (741)
T ss_dssp CCEEECCCSCSSEEEEEEEE-EETT---------EEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEE
T ss_pred ceEEecCCCCcceEEEEEEe-CCCC---------EEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEE
Confidence 6544332 36678899999 9986 444433 357899999999988776665543 4568999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEec-CCCEEEE-EECCCCCEEEEEEC-CC--eEEEEEee
Q 010759 439 SPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTG-NGGIFEV-CWNKEGDKIAACFA-NH--TVCVLDFR 501 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~-~~~i~~~-~ws~~g~~la~~~~-~~--~v~v~~~~ 501 (502)
+|||+++++++.||.++||.+. +++ ...+.. ...+..+ +|+|+|+.|++.+. ++ .+.||++.
T Consensus 345 spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~ 412 (741)
T 2ecf_A 345 LDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKAGLAYFRAGIESARESQIYAVP 412 (741)
T ss_dssp CTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEE
T ss_pred CCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEE
Confidence 9999999999999988888765 445 555544 4457777 59999998875554 44 78899874
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.1e-23 Score=201.29 Aligned_cols=292 Identities=11% Similarity=0.173 Sum_probs=196.1
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC-CcEEEEECC--C
Q 010759 168 LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD-GQARIWSTN--G 244 (502)
Q Consensus 168 ~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d-g~i~iw~~~--~ 244 (502)
++++++.|+.|++|++..... .. .+... .+...+.+++|+|+|++|++++.+ +.|++|++. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~--------~~--~~~~~-----~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~ 71 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGA--------LT--LTQVV-----DVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDD 71 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC--------EE--EEEEE-----ECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred EEEeCCCCCeEEEEEECCCCc--------EE--EeeeE-----ecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCC
Confidence 445557899999999853110 01 11111 124568889999999999998887 999999986 3
Q ss_pred -ce--eEeecCCCCCEEEEEecCCCCEEEEec-CCCeEEEEecc---CcceeEEeeecccCeEEEecCCCc-eE-EEEcC
Q 010759 245 -DL--KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVK---TEEWKQQFEFHSGPTLDVDWRNNV-SF-ATSST 315 (502)
Q Consensus 245 -~~--~~~~~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~ 315 (502)
.. ...+..+. .+..++|+|++++|++++ .++.|.+||+. +......+..+ ..+..+.|..+. .+ +++..
T Consensus 72 ~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~ 149 (343)
T 1ri6_A 72 GALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALK 149 (343)
T ss_dssp CCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGG
T ss_pred CceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCC
Confidence 22 22344343 778999999999886655 48999999994 33344443332 235566665443 34 44448
Q ss_pred CCeEEEEEcCC-Cccee----eecC-CCcceeEEEEcCCCCEEEE-EeCCCcEEEEeCCC--Cce--eeecc---cC---
Q 010759 316 DNMIYVCKIGE-NRPIK----TFAG-HQGEVNCVKWDPTGSLLAS-CSDDVTAKIWNMKQ--DKY--VHDLR---EH--- 378 (502)
Q Consensus 316 d~~i~~~~~~~-~~~~~----~~~~-h~~~v~~v~~~p~~~~l~s-gs~dg~i~iwd~~~--~~~--~~~~~---~~--- 378 (502)
++.|++|++.. ++... .+.. ....+.+++|+|++++++. +..++.|.+|++.. +.. ...+. ..
T Consensus 150 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~ 229 (343)
T 1ri6_A 150 QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSD 229 (343)
T ss_dssp GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCS
T ss_pred CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccc
Confidence 89999999987 43321 2222 2346888999999997654 45889999999953 332 22221 11
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--C--CeEEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCc
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--L--GKLLYSLNGHREPVYSLAFSPTGEYLASGS-LDKS 453 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~--~~~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~ 453 (502)
...+..++|+|++. .+++++..++.|++||+. . .+.+..+..+.. +.+++|+|+|++|++++ .++.
T Consensus 230 ~~~~~~i~~s~dg~--------~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 230 TRWAADIHITPDGR--------HLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp CCCEEEEEECTTSS--------EEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCE
T ss_pred cCCccceEECCCCC--------EEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCe
Confidence 23567899999885 355567789999999998 2 345555655544 88999999999988887 6899
Q ss_pred EEEEe--CCCCee--EEEEecCCCEEEEEECCCCCE
Q 010759 454 MHIWS--LKEGKI--VKTYTGNGGIFEVCWNKEGDK 485 (502)
Q Consensus 454 i~iw~--~~~~~~--~~~~~~~~~i~~~~ws~~g~~ 485 (502)
|.+|+ ..++++ +..+.......+++|.|+-+.
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~~~~ 336 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAHEGG 336 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEEC--
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcccCC
Confidence 99994 456654 444554455678888876543
No 140
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=2.2e-24 Score=203.18 Aligned_cols=253 Identities=16% Similarity=0.207 Sum_probs=191.3
Q ss_pred EEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC-cceeEEeeecc-cCeEEEecCCC
Q 010759 230 TGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT-EEWKQQFEFHS-GPTLDVDWRNN 307 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~-~~~~~~~~~~~-~~~~~~~~~~~ 307 (502)
+++.++.|++|+........+..|...|.+++|+|++++|++++ ++.|++||+.+ ++....+..+. ..+..+.|.++
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd 95 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD 95 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEeccccccccccceEECCC
Confidence 45678999999998776667778999999999999999999886 88999999998 87766554443 45667777654
Q ss_pred -ceEEEEc--C--CCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE-EEeCCCcEEEEeCCC-CceeeecccCCC
Q 010759 308 -VSFATSS--T--DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQ-DKYVHDLREHSK 380 (502)
Q Consensus 308 -~~~~~~~--~--d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~-sgs~dg~i~iwd~~~-~~~~~~~~~~~~ 380 (502)
..++.++ . ...|+.++..... ...+..+. .+.+++|+|++++|+ +++.++.++||++.. ......+..+..
T Consensus 96 g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 173 (297)
T 2ojh_A 96 GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEG 173 (297)
T ss_dssp SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECCCSSS
T ss_pred CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCCcceEcccCCC
Confidence 4455555 2 3456666655544 33444333 488899999999877 788899999998632 233455666778
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC--------
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-------- 451 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-------- 451 (502)
.+.+++|+|++. .+++++..++.++||++. .+..+..+..|...+.+++|+|+|++|++++.+
T Consensus 174 ~~~~~~~s~dg~--------~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~ 245 (297)
T 2ojh_A 174 RNDGPDYSPDGR--------WIYFNSSRTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPR 245 (297)
T ss_dssp CEEEEEECTTSS--------EEEEEECTTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCS
T ss_pred ccccceECCCCC--------EEEEEecCCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccc
Confidence 899999999986 244445568999999986 556667788888889999999999999988866
Q ss_pred ---CcEEEEeCCCCeeEEEE---ecCCCEEEEEECCCCCEEEEEECCC
Q 010759 452 ---KSMHIWSLKEGKIVKTY---TGNGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 452 ---g~i~iw~~~~~~~~~~~---~~~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
+.|++|++.+++..... .+...+..++|+|+|++|++++.+.
T Consensus 246 ~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 246 DLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp SEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred cCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 56999999988654333 2345688999999999999887654
No 141
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.93 E-value=2.9e-23 Score=199.76 Aligned_cols=276 Identities=8% Similarity=0.054 Sum_probs=196.1
Q ss_pred EECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC-CCcEE
Q 010759 161 AWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY-DGQAR 238 (502)
Q Consensus 161 ~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~-dg~i~ 238 (502)
.|++++. .+++++.++.|++||+.++... .... .+...+ .++|+|+|+++++++. ++.|.
T Consensus 4 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~-------------~~~~----~~~~~~-~~~~s~dg~~l~~~~~~~~~i~ 65 (331)
T 3u4y_A 4 MFQTTSNFGIVVEQHLRRISFFSTDTLEIL-------------NQIT----LGYDFV-DTAITSDCSNVVVTSDFCQTLV 65 (331)
T ss_dssp ---CCCCEEEEEEGGGTEEEEEETTTCCEE-------------EEEE----CCCCEE-EEEECSSSCEEEEEESTTCEEE
T ss_pred eEcCCCCEEEEEecCCCeEEEEeCccccee-------------eeEE----ccCCcc-eEEEcCCCCEEEEEeCCCCeEE
Confidence 4666655 5778889999999998776421 1111 113445 9999999997777666 89999
Q ss_pred EEECCCc-e-eEeecCCCCCEEEEEecCCCCEEEEecCCC---eEEEEeccCcceeEEeeecccCeEEEecCCC--ceEE
Q 010759 239 IWSTNGD-L-KCTLSKHKGPIFSLKWNKKGDYLLTGSCDK---TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN--VSFA 311 (502)
Q Consensus 239 iw~~~~~-~-~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~---~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 311 (502)
+|+.... . ...+..+..+..+++|+|++++++++..++ .|.+||+.+++.+..+..+. ....+.|.++ ..++
T Consensus 66 ~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 66 QIETQLEPPKVVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY-DAVGIAISPNGNGLIL 144 (331)
T ss_dssp EEECSSSSCEEEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT-TEEEEEECTTSSCEEE
T ss_pred EEECCCCceeEEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC-CccceEECCCCCEEEE
Confidence 9998654 3 556666667766699999999999665553 99999999998877766543 3467777654 3455
Q ss_pred EEcCCCe-EEEEEcCCCccee----eecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCce---eeecccCCCcE
Q 010759 312 TSSTDNM-IYVCKIGENRPIK----TFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDKY---VHDLREHSKEI 382 (502)
Q Consensus 312 ~~~~d~~-i~~~~~~~~~~~~----~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~~~~---~~~~~~~~~~i 382 (502)
+...++. +.+|++.....+. ........+.+++|+|+|+++ +++..++.|++||+.+++. +..+.. ...+
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~-~~~~ 223 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGT-NNLP 223 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC-SSCC
T ss_pred EecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccC-CCCC
Confidence 6666677 9999987544331 111334457899999999955 5555789999999998887 666653 3566
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeE--EEEeeCC----CC---CEEEEEECCCCCEEEEEe-CCC
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKL--LYSLNGH----RE---PVYSLAFSPTGEYLASGS-LDK 452 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~h----~~---~v~~l~~spdg~~lasgs-~Dg 452 (502)
..++|+|+|. .++++...++.|.+||+.+++. +..+..+ .. .++.++|+|+|++|++++ .++
T Consensus 224 ~~~~~spdg~--------~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 295 (331)
T 3u4y_A 224 GTIVVSRDGS--------TVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTETKLFISANISR 295 (331)
T ss_dssp CCEEECTTSS--------EEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEETTTT
T ss_pred ceEEECCCCC--------EEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCCCEEEEecCCCC
Confidence 7899999986 3445555678899999999887 4444332 22 235689999999886655 467
Q ss_pred cEEEEeCCCCee
Q 010759 453 SMHIWSLKEGKI 464 (502)
Q Consensus 453 ~i~iw~~~~~~~ 464 (502)
.|.+|++.+..+
T Consensus 296 ~v~v~d~~~~~~ 307 (331)
T 3u4y_A 296 ELKVFTISGKVV 307 (331)
T ss_dssp EEEEEETTSCEE
T ss_pred cEEEEEecCCcc
Confidence 999999987554
No 142
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.93 E-value=2.1e-23 Score=201.34 Aligned_cols=265 Identities=11% Similarity=0.197 Sum_probs=188.4
Q ss_pred EEEEEECCCcEEEEECC--Cce-eEeecCCCCCEEEEEecCCCCEEEEecCC-CeEEEEecc--Cccee--EEeeecccC
Q 010759 227 LLATGSYDGQARIWSTN--GDL-KCTLSKHKGPIFSLKWNKKGDYLLTGSCD-KTAIVWDVK--TEEWK--QQFEFHSGP 298 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~--~~~-~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-~~v~iwd~~--~~~~~--~~~~~~~~~ 298 (502)
++++++.++.|++|+.. +.. ......|...+.+++|+|++++|++++.+ +.|++|++. ++... ..+..+. .
T Consensus 7 l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~ 85 (343)
T 1ri6_A 7 VYIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPG-S 85 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSS-C
T ss_pred EEEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCC-C
Confidence 44555789999999985 322 22234577788999999999998888876 999999997 55533 3333333 5
Q ss_pred eEEEecCCCc--eEEEEcCCCeEEEEEcC---CCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCCC-Cce
Q 010759 299 TLDVDWRNNV--SFATSSTDNMIYVCKIG---ENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQ-DKY 371 (502)
Q Consensus 299 ~~~~~~~~~~--~~~~~~~d~~i~~~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~-~~~ 371 (502)
+..+.|..+. .++++..++.|.+|++. ....+..+..+ ..+.+++|+|+++++++++ .++.|++||+.+ ++.
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~ 164 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGL-DGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHL 164 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCC-TTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCE
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCC-CCceEEEECCCCCEEEEecCCCCEEEEEEecCCCce
Confidence 5667775443 33455568899999994 33344444433 3588999999999888777 899999999987 544
Q ss_pred ee----eccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEee----CC--CCCEEEE
Q 010759 372 VH----DLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLN----GH--REPVYSL 436 (502)
Q Consensus 372 ~~----~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~----~h--~~~v~~l 436 (502)
.. .+.. ....+..++|+|++. .+++++..++.|++|++.. ++. ...+. ++ ...+.++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~pdg~--------~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 165 VAQDPAEVTTVEGAGPRHMVFHPNEQ--------YAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp EEEEEEEEECSTTCCEEEEEECTTSS--------EEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred eeecccccccCCCCCcceEEECCCCC--------EEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 22 2222 334678899999885 3455666899999999953 432 22322 11 2357789
Q ss_pred EECCCCCEEE-EEeCCCcEEEEeCC--CC--eeEEEEecCCCEEEEEECCCCCEEEEEE-CCCeEEEEEee
Q 010759 437 AFSPTGEYLA-SGSLDKSMHIWSLK--EG--KIVKTYTGNGGIFEVCWNKEGDKIAACF-ANHTVCVLDFR 501 (502)
Q Consensus 437 ~~spdg~~la-sgs~Dg~i~iw~~~--~~--~~~~~~~~~~~i~~~~ws~~g~~la~~~-~~~~v~v~~~~ 501 (502)
+|+|+|++|+ +++.++.|.+|++. ++ +.+..+.....+..++|+|+|++|+++. .++.|.||++.
T Consensus 237 ~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 237 HITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred EECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 9999998887 45579999999998 33 4455565555688999999999888887 57999999664
No 143
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.93 E-value=1.4e-23 Score=197.60 Aligned_cols=241 Identities=18% Similarity=0.274 Sum_probs=179.1
Q ss_pred CceeeccccccceeEEEECCCCCEEEEEeCCCcEEEEecCC-CCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECC
Q 010759 145 SDVTILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIAD-GTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNG 223 (502)
Q Consensus 145 ~~~~~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~ 223 (502)
.....+..|...|.+++|+|+|++|++++ ++.|++|++.+ +.... ... ..+...|.+++|+|
T Consensus 32 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~-------------~~~---~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 32 RKMRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEK-------------VDT---GFATICNNDHGISP 94 (297)
T ss_dssp TEEEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEE-------------CCC---TTCCCBCSCCEECT
T ss_pred CceeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceE-------------ecc---ccccccccceEECC
Confidence 33455667899999999999999999987 88999999976 53210 000 11235688999999
Q ss_pred CCCEEEEEE--CCCcEEEEE--CCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccC
Q 010759 224 EGTLLATGS--YDGQARIWS--TNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 224 ~~~~l~sg~--~dg~i~iw~--~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
+|++|++++ .++.+.||. ..+.....+..+. .+..++|+|++++|+ +++.|+.+++|++....
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~----------- 162 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDS----------- 162 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTT-----------
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCC-----------
Confidence 999999999 334555554 4444444454443 489999999999877 78889999999854211
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCC-CCceeeecc
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMK-QDKYVHDLR 376 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~-~~~~~~~~~ 376 (502)
.....+..|...+.+++|+|++++|+.++ .++.++||++. .+..+..+.
T Consensus 163 -----------------------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 163 -----------------------------GVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp -----------------------------CCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred -----------------------------CcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 01122334667789999999999887666 58999999886 455666777
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----------CeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCC
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----------STVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----------g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~ 443 (502)
.+...+..++|+|++. +|++++.+ +.|++||+.+++. +..+.+|...|.+++|+|+|+
T Consensus 214 ~~~~~~~~~~~s~dg~---------~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~ 284 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGD---------KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGD 284 (297)
T ss_dssp CCSEEEEEEEECTTSS---------EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSS
T ss_pred cCCcccCCeEECCCCC---------EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCC
Confidence 7778899999999986 55555544 5699999988754 555667888999999999999
Q ss_pred EEEEEeCCC
Q 010759 444 YLASGSLDK 452 (502)
Q Consensus 444 ~lasgs~Dg 452 (502)
+|++++.+.
T Consensus 285 ~l~~~~~~~ 293 (297)
T 2ojh_A 285 EFAYVRYFP 293 (297)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecc
Confidence 998887653
No 144
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.92 E-value=3.6e-23 Score=220.26 Aligned_cols=278 Identities=10% Similarity=0.103 Sum_probs=201.3
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..|.+++|||| +.++.+. |+.|++||+.++.. .... .+...+.+++|||||++|+++ .+
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~~i~~~d~~~~~~--------------~~l~----~~~~~~~~~~~SpdG~~la~~-~~ 140 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QGGLVGFDMLARKV--------------TYLF----DTNEETASLDFSPVGDRVAYV-RN 140 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TTEEEEEETTTTEE--------------EEEE----CCTTCCTTCEECTTSSEEEEE-ET
T ss_pred cCceeEEECCC-CeEEEEE-CCEEEEEECCCCce--------------EEcc----CCcccccCCcCCCCCCEEEEE-EC
Confidence 57999999999 6555543 59999999876531 1111 123457889999999999985 68
Q ss_pred CcEEEEECCC-----ceeEe-ecCCCCC--------------EEEEEecCCCCEEEEec---------------------
Q 010759 235 GQARIWSTNG-----DLKCT-LSKHKGP--------------IFSLKWNKKGDYLLTGS--------------------- 273 (502)
Q Consensus 235 g~i~iw~~~~-----~~~~~-~~~h~~~--------------V~~l~~~~~~~~l~sgs--------------------- 273 (502)
+.|++|++.+ ..... ...+... +.++.|+|+|++|++++
T Consensus 141 ~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~ 220 (706)
T 2z3z_A 141 HNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAES 220 (706)
T ss_dssp TEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEE
T ss_pred CeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCce
Confidence 9999999865 43332 3333332 47899999999999987
Q ss_pred ------------CCCeEEEEeccCcceeEEee--ecccCeEEEecCCCc-eEEEEcCCC-----eEEEEEcCCCcceeee
Q 010759 274 ------------CDKTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNNV-SFATSSTDN-----MIYVCKIGENRPIKTF 333 (502)
Q Consensus 274 ------------~D~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~d~-----~i~~~~~~~~~~~~~~ 333 (502)
.+..|++||+.+++...... .+...+..+.|.++. .+++++.+. .|++|+..++.....+
T Consensus 221 ~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 221 KPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp EEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred EEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 45789999999887654432 344557788887654 455555454 8999999887333332
Q ss_pred c--CCCc---ceeEEEEcC--CCCEEEEEeCCCcEEEEeCC-CCceeeecccCCCcEEE-EEEccCCCCCCCCCCcEEEE
Q 010759 334 A--GHQG---EVNCVKWDP--TGSLLASCSDDVTAKIWNMK-QDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 334 ~--~h~~---~v~~v~~~p--~~~~l~sgs~dg~i~iwd~~-~~~~~~~~~~~~~~i~~-~~~sp~g~~~~~~~~~~~l~ 404 (502)
. .+.. .+.+++|+| +|+++++++.|+.++||.+. .+..+..+..+...+.. ++|+|++. .+++
T Consensus 301 ~~~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~--------~l~~ 372 (706)
T 2z3z_A 301 FVETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGT--------RLYF 372 (706)
T ss_dssp EEEECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSS--------EEEE
T ss_pred EEccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCC--------EEEE
Confidence 2 2222 346789999 99999999999999999876 56667777777777876 79999985 3555
Q ss_pred EEeCCC----eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC----CcEEEEeCCCCe
Q 010759 405 SASFDS----TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD----KSMHIWSLKEGK 463 (502)
Q Consensus 405 sgs~dg----~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D----g~i~iw~~~~~~ 463 (502)
+++.++ .|..||+.+++ +..+. |...+.+++|||||++|+.++.+ +.|++|++.+++
T Consensus 373 ~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 373 ESTEASPLERHFYCIDIKGGK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EESSSCTTCBEEEEEETTCCC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred EecCCCCceEEEEEEEcCCCC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 566655 67777877765 34444 66789999999999988876443 569999998887
No 145
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.92 E-value=7.2e-24 Score=220.49 Aligned_cols=266 Identities=14% Similarity=0.103 Sum_probs=201.0
Q ss_pred CCCeEEEEECCCCCEEEEEEC-CCcEEEEECCCceeEeecCCC-CCEEEEEecCCCCEEEEecC---CCeEEEEeccC--
Q 010759 213 SKDVTTLDWNGEGTLLATGSY-DGQARIWSTNGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKT-- 285 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~-dg~i~iw~~~~~~~~~~~~h~-~~V~~l~~~~~~~~l~sgs~---D~~v~iwd~~~-- 285 (502)
..+|.+++|+|||++|++++. ||+++||++.+.....+..|. ..|.++.|+|+ +.+++++. +...++|.+..
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTS
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccC
Confidence 346999999999999999887 999999998776666676666 58999999999 67776664 56566765533
Q ss_pred -cceeEEeee-cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC----C
Q 010759 286 -EEWKQQFEF-HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----V 359 (502)
Q Consensus 286 -~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d----g 359 (502)
+... .+.. ....+.++.+..+..++++..++.+.+|++.++++......+. .+++|+|||++|++++.+ +
T Consensus 100 ~g~~~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~ 175 (582)
T 3o4h_A 100 PGEEQ-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRV 175 (582)
T ss_dssp TTCCE-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEE
T ss_pred CCccc-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCe
Confidence 2222 2211 1112334455555444444444455599998876554443332 789999999999988877 7
Q ss_pred cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEE
Q 010759 360 TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLA 437 (502)
Q Consensus 360 ~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~ 437 (502)
.|++||+.+++.. .+..+...+..++|+|+|. .|++++.++ .|++||+.+++.. .+.+|...+..++
T Consensus 176 ~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~---------~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~ 244 (582)
T 3o4h_A 176 SLFTSNLSSGGLR-VFDSGEGSFSSASISPGMK---------VTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYR 244 (582)
T ss_dssp EEEEEETTTCCCE-EECCSSCEEEEEEECTTSC---------EEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHC
T ss_pred EEEEEcCCCCCce-EeecCCCccccceECCCCC---------EEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhh
Confidence 8999999887754 5677888899999999997 577888888 8999999998887 7777877777777
Q ss_pred --------ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCe---EEEEE
Q 010759 438 --------FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHT---VCVLD 499 (502)
Q Consensus 438 --------~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~---v~v~~ 499 (502)
|+|||.++++++.|+++++|++ |+.+.. ..+.+.+++|+ +|+.+++++.+.+ +.++|
T Consensus 245 ~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~--~~~~v~~~~~s-dg~~l~~~s~~~~p~~l~~~d 312 (582)
T 3o4h_A 245 PTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEA--PQGNHGRVVLW-RGKLVTSHTSLSTPPRIVSLP 312 (582)
T ss_dssp CSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECC--CSSEEEEEEEE-TTEEEEEEEETTEEEEEEEET
T ss_pred hccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeecc--CCCceEEEEec-CCEEEEEEcCCCCCCeEEEEc
Confidence 9999999999999999999999 776552 23568899999 9999988877754 45554
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=4.6e-24 Score=227.74 Aligned_cols=275 Identities=13% Similarity=0.177 Sum_probs=198.9
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecCCCC---CEEEEEecCCCCEEEEecCC---------CeEEEE
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSKHKG---PIFSLKWNKKGDYLLTGSCD---------KTAIVW 281 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~h~~---~V~~l~~~~~~~~l~sgs~D---------~~v~iw 281 (502)
.+.+++|+|||+++++ +.||.|++|+..+ .....+..|.. .|.+++|+|+|++|++++.+ +.+++|
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 3678899999998776 7899999999864 44455566654 48999999999999998775 788899
Q ss_pred eccCcceeEEeee---cccCeEEEecCCCc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcce-----------------
Q 010759 282 DVKTEEWKQQFEF---HSGPTLDVDWRNNV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEV----------------- 340 (502)
Q Consensus 282 d~~~~~~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v----------------- 340 (502)
|+.+++. ..+.. +...+..+.|.++. .++.++ ++.|++|++..+........+...+
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~ 174 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIF-ENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKT 174 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEE-TTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEE-CCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccC
Confidence 9998876 33322 22236667787554 455444 4799999998877766555544333
Q ss_pred -eEEEEcCCCCEEEEEeCCC----------------------------------cEEEEeCCCCceeeecccC------C
Q 010759 341 -NCVKWDPTGSLLASCSDDV----------------------------------TAKIWNMKQDKYVHDLREH------S 379 (502)
Q Consensus 341 -~~v~~~p~~~~l~sgs~dg----------------------------------~i~iwd~~~~~~~~~~~~~------~ 379 (502)
.+++|+|||+.|++++.|+ .|++||+.+++....+..+ .
T Consensus 175 ~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~ 254 (723)
T 1xfd_A 175 HIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMRE 254 (723)
T ss_dssp SEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSS
T ss_pred cceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCcc
Confidence 7899999999999987653 7999999888765555543 5
Q ss_pred CcEEEEEEccCCCCCCCCCCcEEEEEEe----CCCeEEEEeCCCCeEEEEeeC-CCCCEE----EEEECCCCCEEEE--E
Q 010759 380 KEIYTIRWSPTGSGTNNPNQQLILASAS----FDSTVKLWDVELGKLLYSLNG-HREPVY----SLAFSPTGEYLAS--G 448 (502)
Q Consensus 380 ~~i~~~~~sp~g~~~~~~~~~~~l~sgs----~dg~i~iwd~~~~~~~~~~~~-h~~~v~----~l~~spdg~~las--g 448 (502)
..+..++|+|+|. +|++.+ .+..|++||+.++++...+.. +...+. .++|||||++|+. +
T Consensus 255 ~~~~~~~~SpDg~---------~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 325 (723)
T 1xfd_A 255 YYITMVKWATSTK---------VAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRA 325 (723)
T ss_dssp EEEEEEEESSSSE---------EEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEE
T ss_pred ceeEEEEEeCCCe---------EEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEe
Confidence 6789999999985 454443 235799999999887665543 334443 7899999998775 4
Q ss_pred eCCC------cEEEEe-CCCCee--EEEEe-cCCCEEE-EEECCCCCEEEEEECC---CeEEEEEee
Q 010759 449 SLDK------SMHIWS-LKEGKI--VKTYT-GNGGIFE-VCWNKEGDKIAACFAN---HTVCVLDFR 501 (502)
Q Consensus 449 s~Dg------~i~iw~-~~~~~~--~~~~~-~~~~i~~-~~ws~~g~~la~~~~~---~~v~v~~~~ 501 (502)
..++ .|.+|+ ..++.. ...+. +...+.. ++|+|||+.|++.+.+ +.+.||++.
T Consensus 326 ~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~~ 392 (723)
T 1xfd_A 326 IPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSAN 392 (723)
T ss_dssp ECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEEEEEC
T ss_pred cccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEEe
Confidence 5677 577777 344440 34443 3444554 6999999999877665 788899874
No 147
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.92 E-value=1.5e-22 Score=194.70 Aligned_cols=270 Identities=13% Similarity=0.092 Sum_probs=196.3
Q ss_pred CEEEEEECCCcEEEEECCCc-eeEeecCCC-C-CEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeecc-----
Q 010759 226 TLLATGSYDGQARIWSTNGD-LKCTLSKHK-G-PIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFHS----- 296 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~-~-~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~~----- 296 (502)
.+|++++.++.|++||.... ....+.... . .+..++|+|+++++ ++++.++.|.+||+.+++....+....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~ 81 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERV 81 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEE
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCccccc
Confidence 47899999999999998654 333443222 1 47889999999765 566678999999999998877665422
Q ss_pred cCeEEEecCCCc-eEEEEc------------CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 297 GPTLDVDWRNNV-SFATSS------------TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 297 ~~~~~~~~~~~~-~~~~~~------------~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
..+..+.|..+. .++++. .++.|++|++.+.+.+..+.. ...+.+++|+|+|++|+++ ++.|.+
T Consensus 82 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~ 158 (337)
T 1pby_B 82 KSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHV 158 (337)
T ss_dssp ECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEE
T ss_pred ccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEE
Confidence 134456665443 444443 579999999988877766654 3457889999999988877 689999
Q ss_pred EeCCCCceeeecccCCCcEEEEEEccCCCCCCCC--CCcE---EEEEEeCCC----------eEEEEeCCCCeEE-EEee
Q 010759 364 WNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNP--NQQL---ILASASFDS----------TVKLWDVELGKLL-YSLN 427 (502)
Q Consensus 364 wd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~--~~~~---~l~sgs~dg----------~i~iwd~~~~~~~-~~~~ 427 (502)
||+.+++.+..+..+... ..+.|+|++...... .... ....+..++ .|.+||+.+++.. ..+.
T Consensus 159 ~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~ 237 (337)
T 1pby_B 159 MDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVR 237 (337)
T ss_dssp EETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEE
T ss_pred EECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecC
Confidence 999998877665543310 122667776521100 0000 011111222 5799999988774 3345
Q ss_pred CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 428 GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+...+.+++|+|+|++|+++ ++.|.+||+.+++.+..+.....+.+++|+|+|++|++++.++.|.|||+.
T Consensus 238 ~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~ 309 (337)
T 1pby_B 238 IMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAE 309 (337)
T ss_dssp ECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETT
T ss_pred CCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECc
Confidence 566778999999999999988 799999999999998888776778899999999999999889999999974
No 148
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.91 E-value=2e-21 Score=188.41 Aligned_cols=271 Identities=10% Similarity=0.042 Sum_probs=203.1
Q ss_pred cccceeEEEECCCCCEEEEEeC-------CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 153 HTSEVCACAWSPAGSLLASGSG-------DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~-------D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
....+..++|+|+|++|++++. ++.|.+||..++... ..... ...+..++|+++|
T Consensus 39 ~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~-------------~~~~~-----~~~~~~~~~s~dg 100 (353)
T 3vgz_A 39 VGKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVT-------------QAIHN-----DLKPFGATINNTT 100 (353)
T ss_dssp EESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEE-------------EEEEE-----SSCCCSEEEETTT
T ss_pred hccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEE-------------EEEec-----CCCcceEEECCCC
Confidence 4456889999999998888874 568999998765421 11111 2336778999999
Q ss_pred CEEEE-EECCCcEEEEECCC-ceeEeecCCCCC---------EEEEEecCCCCEEEEec--CCCeEEEEeccCcceeEEe
Q 010759 226 TLLAT-GSYDGQARIWSTNG-DLKCTLSKHKGP---------IFSLKWNKKGDYLLTGS--CDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 226 ~~l~s-g~~dg~i~iw~~~~-~~~~~~~~h~~~---------V~~l~~~~~~~~l~sgs--~D~~v~iwd~~~~~~~~~~ 292 (502)
++++. +..++.|.+||... .....+..+... +.+++|+|+++++++++ .++.|.+||+.+++....+
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~ 180 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI 180 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe
Confidence 96555 45579999999864 444455444322 68899999999877765 4889999999999888777
Q ss_pred eecccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceeeecC----CCcceeEEEEcCCCCEEEEEeC-CCcEEEEeC
Q 010759 293 EFHSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKTFAG----HQGEVNCVKWDPTGSLLASCSD-DVTAKIWNM 366 (502)
Q Consensus 293 ~~~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~ 366 (502)
..+...+..+.|.. ...++++..++.+++|+..+.+.+..+.. +...+.+++|+|++++++.++. ++.|.+||.
T Consensus 181 ~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 181 QNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred cCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 64444455666653 34566677789999999998887766653 5566888999999997666554 599999999
Q ss_pred CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEE
Q 010759 367 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA 446 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la 446 (502)
.+++.+..+..... ..++|+|++. .++++...++.|.+||+.+++.+..+... ..+.+++|+|+|++|+
T Consensus 261 ~~~~~~~~~~~~~~--~~~~~s~dg~--------~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~ 329 (353)
T 3vgz_A 261 RNGNILAKVAAPES--LAVLFNPARN--------EAYVTHRQAGKVSVIDAKSYKVVKTFDTP-THPNSLALSADGKTLY 329 (353)
T ss_dssp TTCCEEEEEECSSC--CCEEEETTTT--------EEEEEETTTTEEEEEETTTTEEEEEEECC-SEEEEEEECTTSCEEE
T ss_pred CCCcEEEEEEcCCC--ceEEECCCCC--------EEEEEECCCCeEEEEECCCCeEEEEEecC-CCCCeEEEcCCCCEEE
Confidence 99988776654332 5688999885 35566667999999999999998888754 4679999999999777
Q ss_pred EEeCCC
Q 010759 447 SGSLDK 452 (502)
Q Consensus 447 sgs~Dg 452 (502)
.+..++
T Consensus 330 v~~~~~ 335 (353)
T 3vgz_A 330 VSVKQK 335 (353)
T ss_dssp EEEECC
T ss_pred EEEccc
Confidence 666553
No 149
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=5.6e-22 Score=197.91 Aligned_cols=254 Identities=15% Similarity=0.159 Sum_probs=172.0
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE----
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA---- 229 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~---- 229 (502)
...++.+++++++.+|++|+.|+ +++|+................... ........+...|.+++|+|+|++|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVD--KVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEE--CCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccc--cCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 34588999999999999999988 899876432111000000011110 00111122356799999999999999
Q ss_pred EEECCCcEEEEECCCc------------eeEeecCCCCCEEEEEecCC-CCEEEEecCCCeEEEEeccCcceeEEeeecc
Q 010759 230 TGSYDGQARIWSTNGD------------LKCTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~------------~~~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
+|+.|+.|+||++... ....+.+|...|.+++|+|+ +++|++|+.||+|++||++++...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~------- 185 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKV------- 185 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEE-------
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcce-------
Confidence 7889999999996422 13456779999999999998 789999999999999999875321
Q ss_pred cCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecc
Q 010759 297 GPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 376 (502)
....+|...|.+++|+|+|++|++|+.||+|++||.+ +.....+.
T Consensus 186 ----------------------------------~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~ 230 (434)
T 2oit_A 186 ----------------------------------CATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIP 230 (434)
T ss_dssp ----------------------------------EEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEEC
T ss_pred ----------------------------------eeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccccccc
Confidence 1223577889999999999999999999999999998 44444443
Q ss_pred cC-------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCe------EEEEeCCCCe----EE-EEee-------CCCC
Q 010759 377 EH-------SKEIYTIRWSPTGSGTNNPNQQLILASASFDST------VKLWDVELGK----LL-YSLN-------GHRE 431 (502)
Q Consensus 377 ~~-------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~------i~iwd~~~~~----~~-~~~~-------~h~~ 431 (502)
.+ ...+.++.|++++. +++++++.+|. +++|++++.. .. ..+. +.+.
T Consensus 231 ~~~~~~~~~~~~v~~v~w~~~~~--------~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~ 302 (434)
T 2oit_A 231 CPPFYESDHPVRVLDVLWIGTYV--------FAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQ 302 (434)
T ss_dssp CCTTCCTTSCEEEEEEEEEETTE--------EEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSC
T ss_pred CCcccCCCCceeEEEEEEecCce--------EEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcC
Confidence 32 23789999998763 33444555543 8999998542 11 1111 2233
Q ss_pred CEEEEEECCCCCEEEEEeC-CCcEEEEeCC
Q 010759 432 PVYSLAFSPTGEYLASGSL-DKSMHIWSLK 460 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~-Dg~i~iw~~~ 460 (502)
+-..+.+-++.+++++++. .+.|.|....
T Consensus 303 ~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 303 HHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred cceeeehhccCCEEEEecCCCCceeEEEec
Confidence 3334444477676665554 4556666543
No 150
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.91 E-value=7.7e-22 Score=189.80 Aligned_cols=272 Identities=9% Similarity=0.013 Sum_probs=197.3
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCC-CeEEEEECCCCCEEE-EEECCCcEEEEECCC
Q 010759 167 SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK-DVTTLDWNGEGTLLA-TGSYDGQARIWSTNG 244 (502)
Q Consensus 167 ~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~V~~l~~s~~~~~l~-sg~~dg~i~iw~~~~ 244 (502)
.+|++++.++.|++||+.++.. +..+.. .+.. .+..++|+|+|++++ +++.++.|.+|+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~-------------~~~~~~---~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~ 65 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAV-------------DKVITI---ADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVT 65 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEE-------------EEEEEC---TTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcE-------------EEEEEc---CCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCC
Confidence 4789999999999999876532 111111 1111 377899999997664 555678999999864
Q ss_pred -ceeEeecC-C----CCCEEEEEecCCCCEEEEec------------CCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 245 -DLKCTLSK-H----KGPIFSLKWNKKGDYLLTGS------------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 245 -~~~~~~~~-h----~~~V~~l~~~~~~~~l~sgs------------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
.....+.. + ...+.+++|+|++++|++++ .++.|.+||+.+++....+.. ...+..+.|..
T Consensus 66 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~ 144 (337)
T 1pby_B 66 GETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-PRQITMLAWAR 144 (337)
T ss_dssp CCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-CSSCCCEEECT
T ss_pred CCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-CCCcceeEECC
Confidence 33333432 2 12567899999999998886 579999999999887766654 33445566654
Q ss_pred Cc-eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC-C-----------------------cE
Q 010759 307 NV-SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-V-----------------------TA 361 (502)
Q Consensus 307 ~~-~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d-g-----------------------~i 361 (502)
+. .++++ ++.|++|++...+.+..+..+... ..+.|+|++..++..+.. + .|
T Consensus 145 dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~-~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (337)
T 1pby_B 145 DGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWE-AETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGL 221 (337)
T ss_dssp TSSCEEEE--SSSEEEEETTTTEEEEEECSTTTT-TTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEE
T ss_pred CCCEEEEe--CCeEEEEECCCCcEeeeeeccccC-CCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccce
Confidence 43 34444 688999999988877666544311 123789999866554433 2 46
Q ss_pred EEEeCCCCcee-eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECC
Q 010759 362 KIWNMKQDKYV-HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 362 ~iwd~~~~~~~-~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~sp 440 (502)
.+||+.+++.. ..+..+...+..++|+|++. +|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|
T Consensus 222 ~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~---------~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~ 289 (337)
T 1pby_B 222 LTMDLETGEMAMREVRIMDVFYFSTAVNPAKT---------RAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVST 289 (337)
T ss_dssp EEEETTTCCEEEEEEEECSSCEEEEEECTTSS---------EEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECT
T ss_pred EEEeCCCCCceEeecCCCCCceeeEEECCCCC---------EEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECC
Confidence 89999988764 22334556788999999986 45555 699999999999988877643 4578999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEec
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYTG 470 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~ 470 (502)
+|++|++++.++.|++||+.+++.+..+..
T Consensus 290 dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~ 319 (337)
T 1pby_B 290 DGSTVWLGGALGDLAAYDAETLEKKGQVDL 319 (337)
T ss_dssp TSCEEEEESBSSEEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEcCCCcEEEEECcCCcEEEEEEc
Confidence 999999999999999999999998888754
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.91 E-value=7.9e-23 Score=218.12 Aligned_cols=314 Identities=12% Similarity=0.066 Sum_probs=213.5
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC-----
Q 010759 159 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----- 233 (502)
Q Consensus 159 ~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~----- 233 (502)
.++|+|+|++++++ .|+.|++|++.++... .....+. .....|.+++|||||++|++++.
T Consensus 20 ~~~~s~dg~~~~~~-~d~~i~~~~~~~g~~~-------------~~~~~~~-~~~~~~~~~~~SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 20 FPNWISGQEYLHQS-ADNNIVLYNIETGQSY-------------TILSNRT-MKSVNASNYGLSPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCEESSSSEEEEEC-TTSCEEEEESSSCCEE-------------EEECHHH-HHTTTCSEEEECTTSSEEEEEEEEEECS
T ss_pred ccEECCCCeEEEEc-CCCCEEEEEcCCCcEE-------------EEEcccc-ccccceeeEEECCCCCeEEEEecCceeE
Confidence 67899999766655 6999999999876421 1111110 00124889999999999998876
Q ss_pred ----CCcEEEEECCCcee---EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe-eecccCe------
Q 010759 234 ----DGQARIWSTNGDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPT------ 299 (502)
Q Consensus 234 ----dg~i~iw~~~~~~~---~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~~~~~------ 299 (502)
++.|++|++.+... ..+ ...+..++|+|+|++|+.++ ++.|++||+.+++..+.. ..+...+
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~~~l---~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRGNEL---PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPD 160 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCSSCC---CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCC
T ss_pred EeecceEEEEEECCCCccccceec---CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEccccc
Confidence 78999999876644 223 35688899999999999885 889999999888765432 1221111
Q ss_pred -----------EEEecCCC-ceEEEEcCCC----------------------------------eEEEEEcCCCcce---
Q 010759 300 -----------LDVDWRNN-VSFATSSTDN----------------------------------MIYVCKIGENRPI--- 330 (502)
Q Consensus 300 -----------~~~~~~~~-~~~~~~~~d~----------------------------------~i~~~~~~~~~~~--- 330 (502)
..+.|.++ ..++.++.|. .|++|++..+..+
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~ 240 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQ 240 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCE
T ss_pred ceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCcccee
Confidence 36777655 4455554331 7889999876542
Q ss_pred -----eeecCCCcceeEEEEcCCCCEEEEEeCC----CcEEEEe----CCCCceeeec----ccCCCcEE-----EEEEc
Q 010759 331 -----KTFAGHQGEVNCVKWDPTGSLLASCSDD----VTAKIWN----MKQDKYVHDL----REHSKEIY-----TIRWS 388 (502)
Q Consensus 331 -----~~~~~h~~~v~~v~~~p~~~~l~sgs~d----g~i~iwd----~~~~~~~~~~----~~~~~~i~-----~~~~s 388 (502)
..+.+|...+.+++|+||++++++.... ..|.+|| ..+++....+ ..|...+. .+.|+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~s 320 (719)
T 1z68_A 241 EVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFS 320 (719)
T ss_dssp ECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEEC
T ss_pred EccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEEC
Confidence 2244688899999999998887775433 2488899 7777765555 35555555 78899
Q ss_pred cCCCCCCCCCCcEEEEEEeCCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCC
Q 010759 389 PTGSGTNNPNQQLILASASFDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKE 461 (502)
Q Consensus 389 p~g~~~~~~~~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~ 461 (502)
|+|.. +++++...+| .|.+||+..++ ...+..+...|..+.++ +++.|+..+.+ +.+++|.+..
T Consensus 321 pdg~~-------l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 321 YDAIS-------YYKIFSDKDGYKHIHYIKDTVEN-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp TTSSC-------EEEEEECTTSCEEEEEESSCSTT-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CCCCe-------EEEEEEccCCceEEEEEECCCCc-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 99862 2333455555 57777887666 45566666678888888 88877766654 8899998753
Q ss_pred --Cee-EEEEe-----cCCCEEEEEECCCCCEEEEEE-CC--CeEEEEEe
Q 010759 462 --GKI-VKTYT-----GNGGIFEVCWNKEGDKIAACF-AN--HTVCVLDF 500 (502)
Q Consensus 462 --~~~-~~~~~-----~~~~i~~~~ws~~g~~la~~~-~~--~~v~v~~~ 500 (502)
+.. ...+. +...+..++|+|+|++++... .. ..+.+||+
T Consensus 392 ~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p~~~l~d~ 441 (719)
T 1z68_A 392 GSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIPISTLHDG 441 (719)
T ss_dssp SSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSCEEEEECS
T ss_pred CCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCCeEEEEEC
Confidence 421 23333 224578899999999877543 32 35666664
No 152
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.90 E-value=2.2e-22 Score=200.80 Aligned_cols=245 Identities=19% Similarity=0.196 Sum_probs=176.9
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCC------------ceeE----eecCCCCCEEEEEecCCCCEEE----Eec
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNG------------DLKC----TLSKHKGPIFSLKWNKKGDYLL----TGS 273 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~------------~~~~----~~~~h~~~V~~l~~~~~~~~l~----sgs 273 (502)
..+..+++++++.++++++.++ +++|+... .... ....|...|++++|+|++++|+ +|+
T Consensus 37 ~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sgs 115 (434)
T 2oit_A 37 ERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSSE 115 (434)
T ss_dssp SCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEETT
T ss_pred CCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEeccC
Confidence 3578899999999999999988 88887421 0000 1123567899999999999999 899
Q ss_pred CCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEE
Q 010759 274 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLL 352 (502)
Q Consensus 274 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l 352 (502)
.|++|++||+.+.... ..... ..-..+..+.+|...|.+++|+|+ +.+|
T Consensus 116 ~d~~v~iwd~~~~~~~-----~~~~~-------------------------~~~~~~~~~~~h~~~V~~v~~~p~~~~~l 165 (434)
T 2oit_A 116 YGSIIAFFDVRTFSNE-----AKQQK-------------------------RPFAYHKLLKDAGGMVIDMKWNPTVPSMV 165 (434)
T ss_dssp TEEEEEEEEHHHHHCT-----TCSSC-------------------------CCSEEEECCCSGGGSEEEEEECSSCTTEE
T ss_pred CCceEEEEEccccccC-----CcCCc-------------------------ceeeeeeccCCCCCceEEEEECCCCCCEE
Confidence 9999999998754100 00000 000113456689999999999998 8899
Q ss_pred EEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC--
Q 010759 353 ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-- 430 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-- 430 (502)
++++.||+|++||++++..+.....|...+.+++|+|+|. +|++|+.||+|++||++ ++....+..|.
T Consensus 166 as~s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~---------~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~ 235 (434)
T 2oit_A 166 AVCLADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGK---------QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFY 235 (434)
T ss_dssp EEEETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSS---------CEEEEETTSCEEEECTT-CCEEEEECCCTTC
T ss_pred EEEECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCC---------EEEEEcCCCcEEEEccC-CcccccccCCccc
Confidence 9999999999999998877666667888999999999986 68999999999999998 66666654442
Q ss_pred -----CCEEEEEECCCCCEEEE-EeCCCc------EEEEeCCCCe-----eEEEEec--------CCCEEEEEECCCCCE
Q 010759 431 -----EPVYSLAFSPTGEYLAS-GSLDKS------MHIWSLKEGK-----IVKTYTG--------NGGIFEVCWNKEGDK 485 (502)
Q Consensus 431 -----~~v~~l~~spdg~~las-gs~Dg~------i~iw~~~~~~-----~~~~~~~--------~~~i~~~~ws~~g~~ 485 (502)
..|.+++|++++.++++ ++.||. +++|++.+.+ ....+.. ....+.+.+-++.++
T Consensus 236 ~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l 315 (434)
T 2oit_A 236 ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDL 315 (434)
T ss_dssp CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTE
T ss_pred CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCE
Confidence 37999999999988865 444543 9999997642 1111111 112344555577777
Q ss_pred EEEEEC-CCeEEEEE
Q 010759 486 IAACFA-NHTVCVLD 499 (502)
Q Consensus 486 la~~~~-~~~v~v~~ 499 (502)
+++++. ...|.|+.
T Consensus 316 ~~v~s~~s~dv~vl~ 330 (434)
T 2oit_A 316 VLAASAASTEVSILA 330 (434)
T ss_dssp EEEEETTCSBCEEEE
T ss_pred EEEecCCCCceeEEE
Confidence 776655 44566664
No 153
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.90 E-value=8.6e-21 Score=183.82 Aligned_cols=249 Identities=11% Similarity=0.143 Sum_probs=171.7
Q ss_pred CCeEEEEECCCCCEEEEEEC---CCcEEEEECCCce---eEeecCCCCCEEEEEecCCCCEEEEec-CCCeEEEEeccC-
Q 010759 214 KDVTTLDWNGEGTLLATGSY---DGQARIWSTNGDL---KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVKT- 285 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~---dg~i~iw~~~~~~---~~~~~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd~~~- 285 (502)
..+..++|+|+|+ |++++. ++.|++|++.+.. ...+..+...+..++|+|++++|++++ .+++|.+|++..
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~ 118 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAAD 118 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCC
Confidence 4567899999999 555544 6899999985433 233345677788999999999888877 789999999853
Q ss_pred cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 286 EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
+.... +.. .......+. ...+...+.+++|+|+|++++++..++.|++|+
T Consensus 119 g~~~~-~~~---------------------------~~~~~~~p~--~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~ 168 (347)
T 3hfq_A 119 GALTL-TDT---------------------------VQHSGHGPR--PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYN 168 (347)
T ss_dssp SCEEE-EEE---------------------------EECCCCCSS--TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEE
T ss_pred CCeee-cce---------------------------eecCCCCCC--ccccCCCceEEEECCCCcEEEEeCCCCEEEEEE
Confidence 22111 100 000000000 112334588899999999777777889999999
Q ss_pred CC-CCcee--eeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEeeCCC------C
Q 010759 366 MK-QDKYV--HDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLNGHR------E 431 (502)
Q Consensus 366 ~~-~~~~~--~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~~h~------~ 431 (502)
+. ++... ..+.. .......++|+|+|. .+++++..++.|++|++.. ++. +..+.... .
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~--------~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~ 240 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQ--------YAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHN 240 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSS--------EEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCC--------EEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCC
Confidence 98 44432 12222 233577899999985 3555667889999999874 543 23333322 3
Q ss_pred CEEEEEECCCCCEE-EEEeCCCcEEEEeCCC-C--eeEEEEecC-CCEEEEEECCCCCEEEEEEC-CCeEEEEEee
Q 010759 432 PVYSLAFSPTGEYL-ASGSLDKSMHIWSLKE-G--KIVKTYTGN-GGIFEVCWNKEGDKIAACFA-NHTVCVLDFR 501 (502)
Q Consensus 432 ~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~-~--~~~~~~~~~-~~i~~~~ws~~g~~la~~~~-~~~v~v~~~~ 501 (502)
.+..++|+|||++| ++...++.|.+|++.. + +.+..+... ..+..++|+|||++|+++.. ++.|.||++.
T Consensus 241 ~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 241 GAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp EEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred cceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEe
Confidence 48899999999987 5666789999999873 3 445555543 34789999999998888876 4899999653
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.90 E-value=6.5e-22 Score=205.76 Aligned_cols=267 Identities=12% Similarity=0.120 Sum_probs=194.0
Q ss_pred ccceeEEEECCCCCEEEEEeC-CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~-D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
..+|++++|+|||++||+++. ||+++||++.++.. +.+. ..+...|..++|||| +++++++
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~--------------~~lt---~~~~~~~~~~~~spd-~~l~~~~ 82 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGET--------------VKLN---REPINSVLDPHYGVG-RVILVRD 82 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEE--------------EECC---SSCCSEECEECTTCS-EEEEEEE
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCc--------------Eeee---cccccccccccCCCC-eEEEEec
Confidence 567999999999999999887 99999999754321 1111 112246899999999 8888777
Q ss_pred C---CCcEEEEE--C--CCceeEeecCCCCCEEEEEecCCCC--EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 233 Y---DGQARIWS--T--NGDLKCTLSKHKGPIFSLKWNKKGD--YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 233 ~---dg~i~iw~--~--~~~~~~~~~~h~~~V~~l~~~~~~~--~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
. +...+||. . .+... .+..+. .+...+|+|+++ .+++++.++ +.+||+.+++.......+. .++.
T Consensus 83 ~~~g~~~~~l~~~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~~---~~~~ 156 (582)
T 3o4h_A 83 VSKGAEQHALFKVNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELARLPG---FGFV 156 (582)
T ss_dssp CSTTSCCEEEEEEETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEEEESS---CEEE
T ss_pred cCCCCcceEEEEEeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEeecCCC---ceEE
Confidence 5 45556654 4 44433 333222 334667888875 344555554 4599999987665544333 4555
Q ss_pred cC-CCceEEEEcCC----CeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCceeeecc
Q 010759 304 WR-NNVSFATSSTD----NMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDLR 376 (502)
Q Consensus 304 ~~-~~~~~~~~~~d----~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg--~i~iwd~~~~~~~~~~~ 376 (502)
|. +...++.++.+ ..|++|++.++... .+.+|.+.+..++|+|||+.|+++..++ .|++||+.+++.. .+.
T Consensus 157 ~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 157 SDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEEETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred ECCCCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 64 34445545544 67999998876654 6778888999999999999999888898 8999999988877 666
Q ss_pred cCCCcEEEEE--------EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEE
Q 010759 377 EHSKEIYTIR--------WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 377 ~~~~~i~~~~--------~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasg 448 (502)
.+...+..+. |+|+|. ++++++.+|.+++|++ ++.+. .+.+.|.+++|+ +|++++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~---------~~~~~~~~g~~~l~~~--g~~~~---~~~~~v~~~~~s-dg~~l~~~ 299 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGR---------LAVVARREGRSAVFID--GERVE---APQGNHGRVVLW-RGKLVTSH 299 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSC---------EEEEEEETTEEEEEET--TEEEC---CCSSEEEEEEEE-TTEEEEEE
T ss_pred CCCcChhhhhhccccceeEcCCCc---------EEEEEEcCCcEEEEEE--CCeec---cCCCceEEEEec-CCEEEEEE
Confidence 6666666666 999984 7889999999999999 76654 344679999999 99999988
Q ss_pred eCCC---cEEEEeCCC
Q 010759 449 SLDK---SMHIWSLKE 461 (502)
Q Consensus 449 s~Dg---~i~iw~~~~ 461 (502)
+.+. .|.+|+..+
T Consensus 300 s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 300 TSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EETTEEEEEEEETTCC
T ss_pred cCCCCCCeEEEEcCCC
Confidence 8774 477777653
No 155
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=7.2e-21 Score=184.39 Aligned_cols=252 Identities=13% Similarity=0.153 Sum_probs=174.1
Q ss_pred ccccceeEEEECCCCCEEEEEeC---CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSG---DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~---D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
.+...+..++|+|+|+ |++++. ++.|++|++.++.. ..+.... .+...+..++|+|+|++|
T Consensus 37 ~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~-----------~~~~~~~----~~~~~p~~~a~spdg~~l 100 (347)
T 3hfq_A 37 AATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA-----------HKLNTVV----APGTPPAYVAVDEARQLV 100 (347)
T ss_dssp EECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE-----------EEEEEEE----EESCCCSEEEEETTTTEE
T ss_pred eccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE-----------EEeeeee----cCCCCCEEEEECCCCCEE
Confidence 4556788899999999 555543 68999999865421 1111111 123567899999999999
Q ss_pred EEEE-CCCcEEEEECCC--ce--eEeecC---------CCCCEEEEEecCCCCEEEEecCCCeEEEEecc-CcceeEEee
Q 010759 229 ATGS-YDGQARIWSTNG--DL--KCTLSK---------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFE 293 (502)
Q Consensus 229 ~sg~-~dg~i~iw~~~~--~~--~~~~~~---------h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~-~~~~~~~~~ 293 (502)
++++ .++.|.+|++.. .. ...+.. +...+.+++|+|+|+.++++..++.|++|++. ++.+....
T Consensus 101 ~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~- 179 (347)
T 3hfq_A 101 YSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQS- 179 (347)
T ss_dssp EEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEE-
T ss_pred EEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEee-
Confidence 8888 678999999752 21 122211 12348899999999977777788999999987 44322110
Q ss_pred ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEE-EEeCCCcEEEEeCCC--C
Q 010759 294 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLA-SCSDDVTAKIWNMKQ--D 369 (502)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~-sgs~dg~i~iwd~~~--~ 369 (502)
.+.. ....+..++|+|+|++++ ++..++.|.+|++.. +
T Consensus 180 --------------------------------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g 221 (347)
T 3hfq_A 180 --------------------------------------VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTG 221 (347)
T ss_dssp --------------------------------------EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred --------------------------------------eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCC
Confidence 0011 112456799999999554 456788999999874 4
Q ss_pred ce--eeecccCC------CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC---CCeEEEEeeCCCCCEEEEEE
Q 010759 370 KY--VHDLREHS------KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE---LGKLLYSLNGHREPVYSLAF 438 (502)
Q Consensus 370 ~~--~~~~~~~~------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~ 438 (502)
+. +..+.... ..+..++|+|+|. .+++++..++.|.+|++. ..+.+..+..+...+..++|
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~--------~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~ 293 (347)
T 3hfq_A 222 AFTQLGIVKTIPADYTAHNGAAAIRLSHDGH--------FLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDL 293 (347)
T ss_dssp EEEEEEEEESSCTTCCSCCEEEEEEECTTSC--------EEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEE
T ss_pred ceEEeeeeeecCCCCCCCCcceeEEECCCCC--------EEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEE
Confidence 32 22222222 3478899999986 344677789999999987 33556667766677899999
Q ss_pred CCCCCEEEEEeCC-CcEEEE--eCCCCeeEE
Q 010759 439 SPTGEYLASGSLD-KSMHIW--SLKEGKIVK 466 (502)
Q Consensus 439 spdg~~lasgs~D-g~i~iw--~~~~~~~~~ 466 (502)
+|||++|++++.+ +.|.+| +..+|++..
T Consensus 294 spdg~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 294 DPTEAFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CCCCCEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 9999999888764 899999 556777653
No 156
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.89 E-value=6e-20 Score=178.96 Aligned_cols=269 Identities=12% Similarity=0.127 Sum_probs=180.3
Q ss_pred CCEEEEEEC----CCcEEEEECC---CceeEeecCCCCCEEEEEecCCCCEEEEecCC----CeEEEEeccC--cceeE-
Q 010759 225 GTLLATGSY----DGQARIWSTN---GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKT--EEWKQ- 290 (502)
Q Consensus 225 ~~~l~sg~~----dg~i~iw~~~---~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D----~~v~iwd~~~--~~~~~- 290 (502)
..+++.|++ ++.|.+|..+ +........+...+..++|+|++++|++++.+ +.|.+|++.. +....
T Consensus 13 ~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~ 92 (361)
T 3scy_A 13 ELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLL 92 (361)
T ss_dssp EEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEE
T ss_pred ceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEe
Confidence 345666654 4689999753 22222111166677889999999999998886 8999998865 44332
Q ss_pred -EeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee------cC--------CCcceeEEEEcCCCCEEEEE
Q 010759 291 -QFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF------AG--------HQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 291 -~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~------~~--------h~~~v~~v~~~p~~~~l~sg 355 (502)
....+......+.+.....+++...++.+.+|++.....+..+ .+ +...+.+++|+|+|++++++
T Consensus 93 ~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~ 172 (361)
T 3scy_A 93 NTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLAD 172 (361)
T ss_dssp EEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEE
T ss_pred eEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEE
Confidence 2222334455666633334455567899999998754332211 11 12335789999999966554
Q ss_pred -eCCCcEEEEeCCCCce------e-------eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010759 356 -SDDVTAKIWNMKQDKY------V-------HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK 421 (502)
Q Consensus 356 -s~dg~i~iwd~~~~~~------~-------~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 421 (502)
..++.|++|++..... + ............++|+|+|. .+++++..++.|.+|++.+++
T Consensus 173 ~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~--------~l~v~~~~~~~v~v~~~~~g~ 244 (361)
T 3scy_A 173 DLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGK--------FAYLINEIGGTVIAFRYADGM 244 (361)
T ss_dssp ETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSS--------EEEEEETTTCEEEEEEEETTE
T ss_pred eCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCC--------EEEEEcCCCCeEEEEEecCCc
Confidence 4588999998875431 1 11123345678899999986 233444478999999998775
Q ss_pred E--EEEee---CCCCCEEEEEECCCCCEEEEEeC--CCcEEEEeCC--CCe--eEEEEecCCCEEEEEECCCCCEEEEEE
Q 010759 422 L--LYSLN---GHREPVYSLAFSPTGEYLASGSL--DKSMHIWSLK--EGK--IVKTYTGNGGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 422 ~--~~~~~---~h~~~v~~l~~spdg~~lasgs~--Dg~i~iw~~~--~~~--~~~~~~~~~~i~~~~ws~~g~~la~~~ 490 (502)
. +..+. .+......++|+|||++|+++.. ++.|.+|++. +++ .+..+.....+.+++|+|||++|+++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg~~l~~~~ 324 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNGKYLLVAC 324 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTSCEEEEEE
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCCCEEEEEE
Confidence 4 33332 23345789999999999876665 4899999985 455 344454434578999999999888887
Q ss_pred -CCCeEEEEEee
Q 010759 491 -ANHTVCVLDFR 501 (502)
Q Consensus 491 -~~~~v~v~~~~ 501 (502)
.++.|.||.+.
T Consensus 325 ~~~~~v~v~~~d 336 (361)
T 3scy_A 325 RDTNVIQIFERD 336 (361)
T ss_dssp TTTTEEEEEEEC
T ss_pred CCCCCEEEEEEE
Confidence 57899997653
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.89 E-value=1e-20 Score=186.14 Aligned_cols=310 Identities=13% Similarity=0.082 Sum_probs=187.7
Q ss_pred ceeeccccccceeE-----EEECCCCCEEEEEeC-CCc--EEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 146 DVTILEGHTSEVCA-----CAWSPAGSLLASGSG-DST--ARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 146 ~~~~l~~H~~~V~~-----~~~spd~~~l~sgs~-D~~--i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
.+..|..|...+.. .+|||||++||.++. ++. |.+||+.++... .+ ...+...+.
T Consensus 22 ~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~--------------~l---t~~~~~~~~ 84 (388)
T 3pe7_A 22 QVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVAT--------------QL---TEGRGDNTF 84 (388)
T ss_dssp EEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEE--------------EC---CCSSCBCSS
T ss_pred ceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceE--------------Ee---eeCCCCCcc
Confidence 34556666665555 889999999999887 674 777787665311 11 112223344
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCCcee-EeecCCCCCEEEEE--ecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNGDLK-CTLSKHKGPIFSLK--WNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~~~~h~~~V~~l~--~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
.++|+|||++|+.++.++.|++|++.+... ..+..+...+.... ++|++.+++....+ ...+.
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~---------~~~~~----- 150 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIR---------REDWV----- 150 (388)
T ss_dssp SCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEE---------GGGCC-----
T ss_pred ceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeecccccc---------Ccccc-----
Confidence 678999999999999999999999875433 33444444443333 47888776642110 00000
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCC------CcEEEEeCC
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDD------VTAKIWNMK 367 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~d------g~i~iwd~~ 367 (502)
+.. .+..-..+.....+..|++|++.++... .+..+...+..++|+| +|+.|+.++.+ ..|.++|..
T Consensus 151 ---~~~--~~~~~~~~~~~~~~~~l~~~d~~~g~~~-~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~ 224 (388)
T 3pe7_A 151 ---PLT--DWKKFHEFYFTKPCCRLMRVDLKTGEST-VILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINED 224 (388)
T ss_dssp ---CCC--SHHHHHHHGGGCCCEEEEEEETTTCCEE-EEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETT
T ss_pred ---ccc--ccchhhhhhccCCcceEEEEECCCCceE-EeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCC
Confidence 000 0000000001122345667777665433 3334556788999999 99998877764 367888876
Q ss_pred CCceeeecccCC--CcEEEEEEccCCCCCCCCCCcEEEEEEeCCC---eEEEEeCCCCeE--EEEeeCCCCC---EEEEE
Q 010759 368 QDKYVHDLREHS--KEIYTIRWSPTGSGTNNPNQQLILASASFDS---TVKLWDVELGKL--LYSLNGHREP---VYSLA 437 (502)
Q Consensus 368 ~~~~~~~~~~~~--~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg---~i~iwd~~~~~~--~~~~~~h~~~---v~~l~ 437 (502)
.+... .+..+. ..+..++|+|+|.. +++++....+ .|++||+.+++. +..+.++... ...++
T Consensus 225 ~~~~~-~l~~~~~~~~~~~~~~spdg~~-------l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~ 296 (388)
T 3pe7_A 225 GTNMR-KVKTHAEGESCTHEFWVPDGSA-------LVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSL 296 (388)
T ss_dssp SCCCE-ESCCCCTTEEEEEEEECTTSSC-------EEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSE
T ss_pred CCceE-EeeeCCCCcccccceECCCCCE-------EEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCe
Confidence 55433 333333 35778899999862 2222222222 399999998874 3333331100 11237
Q ss_pred ECCCCCEEEEE---------eCCCcEEEEeCCCCeeEEEEecCC-----------CEEEEEECCCCCEEEEEEC-CCeEE
Q 010759 438 FSPTGEYLASG---------SLDKSMHIWSLKEGKIVKTYTGNG-----------GIFEVCWNKEGDKIAACFA-NHTVC 496 (502)
Q Consensus 438 ~spdg~~lasg---------s~Dg~i~iw~~~~~~~~~~~~~~~-----------~i~~~~ws~~g~~la~~~~-~~~v~ 496 (502)
|+|||++|+.. ..+..|++|++.++++.....+.. .+..++|+|||++|+.++. ++...
T Consensus 297 ~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~ 376 (388)
T 3pe7_A 297 MVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPA 376 (388)
T ss_dssp EEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCE
T ss_pred EccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCcee
Confidence 99999988754 456789999999887654444433 4678999999999887764 66666
Q ss_pred EEEe
Q 010759 497 VLDF 500 (502)
Q Consensus 497 v~~~ 500 (502)
||.+
T Consensus 377 l~~~ 380 (388)
T 3pe7_A 377 LYLA 380 (388)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6654
No 158
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.89 E-value=1.3e-20 Score=182.29 Aligned_cols=274 Identities=11% Similarity=0.049 Sum_probs=187.6
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE-EEECCCcE
Q 010759 159 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA-TGSYDGQA 237 (502)
Q Consensus 159 ~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~-sg~~dg~i 237 (502)
++++++++.++++++.+++|++||+.++.. .+.+.. .....+..++|+|+|++++ ++..++.|
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~-------------~~~~~~---~~~~~~~~~~~s~dg~~~~v~~~~~~~i 67 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTV-------------YKSCVM---PDKFGPGTAMMAPDNRTAYVLNNHYGDI 67 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEE-------------EEEEEC---SSCCSSCEEEECTTSSEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcE-------------EEEEec---CCCCCCceeEECCCCCEEEEEeCCCCcE
Confidence 457888999999999999999999876532 111111 1112467899999998665 55578999
Q ss_pred EEEECCCc-eeEeecCCC------CCEEEEEecCCCCEEEEecCC------------CeEEEEeccCccee---EEeeec
Q 010759 238 RIWSTNGD-LKCTLSKHK------GPIFSLKWNKKGDYLLTGSCD------------KTAIVWDVKTEEWK---QQFEFH 295 (502)
Q Consensus 238 ~iw~~~~~-~~~~~~~h~------~~V~~l~~~~~~~~l~sgs~D------------~~v~iwd~~~~~~~---~~~~~~ 295 (502)
.+|+.... ....+..+. ..+.+++|+|+|++|++++.+ +.|.+||+.+++.. ..+..+
T Consensus 68 ~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~ 147 (349)
T 1jmx_B 68 YGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP 147 (349)
T ss_dssp EEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC
T ss_pred EEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC
Confidence 99998654 333443222 236789999999999998866 89999999885433 233222
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-c-----------------------ceeEEEEcCCCCE
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-G-----------------------EVNCVKWDPTGSL 351 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-~-----------------------~v~~v~~~p~~~~ 351 (502)
..+.++.|..+..++.++. .|++|+..+.+.+..+..+. + ...++++++++..
T Consensus 148 -~~~~~~~~s~dg~l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 224 (349)
T 1jmx_B 148 -RQVYLMRAADDGSLYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQ 224 (349)
T ss_dssp -SSCCCEEECTTSCEEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-----
T ss_pred -CcccceeECCCCcEEEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcC
Confidence 2455666754443444433 49999998887766654331 0 2345666655421
Q ss_pred -----------EEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 352 -----------LASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 352 -----------l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
+.....++.+++|++ ..+...+..++|+| ++. +++++ ++.|.+||+.+
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~sp~dg~---------~l~~~--~~~v~~~d~~~ 284 (349)
T 1jmx_B 225 DPATADLLYGYLSVDLKTGKTHTQEF---------ADLTELYFTGLRSPKDPN---------QIYGV--LNRLAKYDLKQ 284 (349)
T ss_dssp --CCCEEEEEEEEEETTTCCEEEEEE---------EECSSCEEEEEECSSCTT---------EEEEE--ESEEEEEETTT
T ss_pred CccccccceeEEEEeccCCcEEeccc---------ccCCCcceeeEecCCCCC---------EEEEE--cCeEEEEECcc
Confidence 112233344444443 22456788999999 886 45555 88999999999
Q ss_pred CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC
Q 010759 420 GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG 472 (502)
Q Consensus 420 ~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~ 472 (502)
++.+..+... ..+.+++|+|+|++|++++.++.|++||+.+++.+..+...+
T Consensus 285 ~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~~ 336 (349)
T 1jmx_B 285 RKLIKAANLD-HTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLPG 336 (349)
T ss_dssp TEEEEEEECS-SCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECSS
T ss_pred CeEEEEEcCC-CCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecCC
Confidence 9988777633 457899999999999888889999999999999888876543
No 159
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.88 E-value=2.3e-20 Score=180.50 Aligned_cols=270 Identities=13% Similarity=0.074 Sum_probs=184.1
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCCc-eeEeecCCC-CCEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeee
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNGD-LKCTLSKHK-GPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~-~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
.+++++++.++++++.++.|++||.... ....+..+. ..+..++|+|+++++ ++++.++.|.+||+.+++....+..
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~ 83 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANL 83 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEES
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEc
Confidence 3467788999999999999999998653 444454433 256789999999865 4666789999999999887766654
Q ss_pred ccc------CeEEEecCCC-ceEEEEcC------------CCeEEEEEcCCCcc---eeeecCCCcceeEEEEcCCCCEE
Q 010759 295 HSG------PTLDVDWRNN-VSFATSST------------DNMIYVCKIGENRP---IKTFAGHQGEVNCVKWDPTGSLL 352 (502)
Q Consensus 295 ~~~------~~~~~~~~~~-~~~~~~~~------------d~~i~~~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~l 352 (502)
... .+..+.|.++ ..+++++. ++.|++|++.+++. +..+.. ...+.+++|+|+|+ +
T Consensus 84 ~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 84 SSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMRAADDGS-L 161 (349)
T ss_dssp CCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEEECTTSC-E
T ss_pred ccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCcccceeECCCCc-E
Confidence 321 2455666544 34555443 48999999987432 333433 33588999999999 5
Q ss_pred EEEeCCCcEEEEeCCCCceeeecccCCC------------------------cEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 353 ASCSDDVTAKIWNMKQDKYVHDLREHSK------------------------EIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~------------------------~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
+.++. .|.+||..+++.+..+..+.. ....+++++++...... ...
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~--------~~~ 231 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPAT--------ADL 231 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CC--------CEE
T ss_pred EEccC--cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccc--------ccc
Confidence 55543 499999998887765543210 23345555443211000 000
Q ss_pred CCeEEEEeCCCCeE-EEEeeCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEE
Q 010759 409 DSTVKLWDVELGKL-LYSLNGHREPVYSLAFSP-TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKI 486 (502)
Q Consensus 409 dg~i~iwd~~~~~~-~~~~~~h~~~v~~l~~sp-dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~l 486 (502)
...+..+|..+++. ...+..+...+.+++|+| +|++|+++ ++.|.+||+.+++.+..+.....+.+++|+|+|++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 309 (349)
T 1jmx_B 232 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKL 309 (349)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECSSSSCE
T ss_pred ceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCeEEEEEcCCCCccceEECCCCCEE
Confidence 01112244444432 122333566789999999 99999888 889999999999998888766678899999999999
Q ss_pred EEEECCCeEEEEEee
Q 010759 487 AACFANHTVCVLDFR 501 (502)
Q Consensus 487 a~~~~~~~v~v~~~~ 501 (502)
+++..++.|.|||.+
T Consensus 310 ~~~~~~~~v~v~d~~ 324 (349)
T 1jmx_B 310 YLGGTFNDLAVFNPD 324 (349)
T ss_dssp EEESBSSEEEEEETT
T ss_pred EEecCCCeEEEEecc
Confidence 888889999999974
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.87 E-value=1.1e-20 Score=202.09 Aligned_cols=278 Identities=12% Similarity=0.093 Sum_probs=182.1
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccc-cCCCCeEEEEECCCCCEEEEEECC
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN-EKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
....++|+|||++|+++ |++|++|++.++... ..+.++.. ........++|||||++|+.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~ 82 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSS-------------VFLENSTFDEFGHSINDYSISPDGQFILLEYNY 82 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEE-------------EEECTTTTTTCCSCCCEEEECTTSSEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceE-------------EEEechhhhhhcccccceEECCCCCEEEEEECC
Confidence 46689999999999997 999999999876521 11122211 111223458999999999998876
Q ss_pred ---------CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe-eecccCeEEEec
Q 010759 235 ---------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF-EFHSGPTLDVDW 304 (502)
Q Consensus 235 ---------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~-~~~~~~~~~~~~ 304 (502)
+.+.+||+.+.....+..|.+.+...+|||+|+.|+.+ .|+.|++||+.++...+.. ..+...+
T Consensus 83 ~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~----- 156 (740)
T 4a5s_A 83 VKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDII----- 156 (740)
T ss_dssp EECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTE-----
T ss_pred eeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCceEEEcCCCCccce-----
Confidence 56679999887766777888899999999999999887 5789999999887644321 1111111
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCC---------cceeEEEEcCCCCEEEEEeCC-----------------
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWDPTGSLLASCSDD----------------- 358 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~l~sgs~d----------------- 358 (502)
+.|+. +...++.|||||+.||.++.|
T Consensus 157 ----------------------------~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~ 208 (740)
T 4a5s_A 157 ----------------------------YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESL 208 (740)
T ss_dssp ----------------------------EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTC
T ss_pred ----------------------------ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCC
Confidence 11111 112235555555555544321
Q ss_pred -------------------CcEEEEeCCC---Cc--eeeecc------cCCCcEEEEEEccCCCCCCCCCCcEEEEEE-e
Q 010759 359 -------------------VTAKIWNMKQ---DK--YVHDLR------EHSKEIYTIRWSPTGSGTNNPNQQLILASA-S 407 (502)
Q Consensus 359 -------------------g~i~iwd~~~---~~--~~~~~~------~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg-s 407 (502)
.+|++||+.+ +. ....+. .+...+..++|+|+|. +++.. .
T Consensus 209 ~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~---------~~~~~~~ 279 (740)
T 4a5s_A 209 QYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER---------ISLQWLR 279 (740)
T ss_dssp SSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE---------EEEEEEE
T ss_pred CCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe---------EEEEEeC
Confidence 2588899988 63 122232 2667789999999985 33332 2
Q ss_pred ---CCCeEEEEeCCCCe----EE--EEe--eCCCCCEE-----EEEECCCCCEEE-EEeC-CC--cEEEEeCCCCeeEEE
Q 010759 408 ---FDSTVKLWDVELGK----LL--YSL--NGHREPVY-----SLAFSPTGEYLA-SGSL-DK--SMHIWSLKEGKIVKT 467 (502)
Q Consensus 408 ---~dg~i~iwd~~~~~----~~--~~~--~~h~~~v~-----~l~~spdg~~la-sgs~-Dg--~i~iw~~~~~~~~~~ 467 (502)
.+..|++||+.+++ +. ..+ .+|...|. .++|+|||+.|+ ..+. +| .|++|++.++...+.
T Consensus 280 r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~~~l 359 (740)
T 4a5s_A 280 RIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDCTFI 359 (740)
T ss_dssp SSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSCEES
T ss_pred CCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCceEec
Confidence 23479999998876 22 112 45655554 789999999887 6664 33 688888887766555
Q ss_pred EecCCCEEEEEECCCCCEEEEEECC
Q 010759 468 YTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 468 ~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
..+...+..+.+ +||+.|+..+..
T Consensus 360 T~g~~~v~~~~~-~d~~~i~f~~~~ 383 (740)
T 4a5s_A 360 TKGTWEVIGIEA-LTSDYLYYISNE 383 (740)
T ss_dssp CCSSSCEEEEEE-ECSSEEEEEESC
T ss_pred ccCCEEEEEEEE-EeCCEEEEEEec
Confidence 455555665542 447776665543
No 161
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.87 E-value=5e-19 Score=172.37 Aligned_cols=257 Identities=12% Similarity=0.073 Sum_probs=172.8
Q ss_pred CCCeEEEEECCCCCEEEEEECC----CcEEEEECCC---ce--eEeecCCCCCEEEEEecCCCCEEEEec-CCCeEEEEe
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD----GQARIWSTNG---DL--KCTLSKHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWD 282 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d----g~i~iw~~~~---~~--~~~~~~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd 282 (502)
...+..++|+|+|++|++++.+ +.|.+|++.. .. ......+......+++ ++++|++++ .+++|.+|+
T Consensus 49 ~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~ 126 (361)
T 3scy_A 49 VANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFP 126 (361)
T ss_dssp CSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEE
T ss_pred CCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEE
Confidence 3456789999999999999886 7999998653 22 2233445556777888 777766655 689999999
Q ss_pred ccCcceeEEe---eec-----------ccCeEEEecCCCc--eEEEEcCCCeEEEEEcCCCcc------e-------eee
Q 010759 283 VKTEEWKQQF---EFH-----------SGPTLDVDWRNNV--SFATSSTDNMIYVCKIGENRP------I-------KTF 333 (502)
Q Consensus 283 ~~~~~~~~~~---~~~-----------~~~~~~~~~~~~~--~~~~~~~d~~i~~~~~~~~~~------~-------~~~ 333 (502)
+........+ ..+ ...+..+.|.++. .+++...++.|++|++..... + ...
T Consensus 127 ~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~ 206 (361)
T 3scy_A 127 IGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFK 206 (361)
T ss_dssp BCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEE
T ss_pred eCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccccccee
Confidence 9754322111 111 1123556675544 445556688999998875431 1 112
Q ss_pred cCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCce--eeec---ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKY--VHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILASAS 407 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~~~~--~~~~---~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs 407 (502)
..+...+..++|+|+|+++++++ .++.|.+|++.++.. +..+ ..+......++|+|+|. .++++..
T Consensus 207 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~--------~l~v~~~ 278 (361)
T 3scy_A 207 VAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGK--------YLYASNR 278 (361)
T ss_dssp CCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSS--------EEEEEEC
T ss_pred cCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCC--------EEEEECC
Confidence 23345578999999999877666 689999999986654 2222 22334568999999986 2334444
Q ss_pred C-CCeEEEEeCC--CCe--EEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEe--CCCCeeEEEEe--cCCCEEEE
Q 010759 408 F-DSTVKLWDVE--LGK--LLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWS--LKEGKIVKTYT--GNGGIFEV 477 (502)
Q Consensus 408 ~-dg~i~iwd~~--~~~--~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~--~~~~~~~~~~~--~~~~i~~~ 477 (502)
. ++.|.+|++. +++ .+..+.. ...+.+++|+|+|++|++++ .++.|.+|. ..+|++..... ....+.++
T Consensus 279 ~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v 357 (361)
T 3scy_A 279 LKADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCL 357 (361)
T ss_dssp SSSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEE
T ss_pred CCCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEE
Confidence 4 5899999985 444 4445554 45678999999999998887 678999964 55777654431 23467888
Q ss_pred EEC
Q 010759 478 CWN 480 (502)
Q Consensus 478 ~ws 480 (502)
+|.
T Consensus 358 ~~~ 360 (361)
T 3scy_A 358 KFV 360 (361)
T ss_dssp EEE
T ss_pred EEc
Confidence 885
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.87 E-value=2.1e-21 Score=207.15 Aligned_cols=271 Identities=14% Similarity=0.132 Sum_probs=188.8
Q ss_pred EEEECCCCCEEEEEECCCcEEEEECCCceeEe-ecCCCC---CEEEEEecCCCCEEEEecC---------CCeEEEEecc
Q 010759 218 TLDWNGEGTLLATGSYDGQARIWSTNGDLKCT-LSKHKG---PIFSLKWNKKGDYLLTGSC---------DKTAIVWDVK 284 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~-~~~h~~---~V~~l~~~~~~~~l~sgs~---------D~~v~iwd~~ 284 (502)
+++|+|+|+++++ +.|+.|++|+..+..... +..|.. .|.+++|+|+|++|++++. +++|++||+.
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~ 98 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLS 98 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETT
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECC
Confidence 6799999976555 469999999987654443 333433 4889999999999998876 7899999999
Q ss_pred CcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee-cCCCcce-----------------eEEEEc
Q 010759 285 TEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEV-----------------NCVKWD 346 (502)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v-----------------~~v~~~ 346 (502)
+++....... ...+..+.|.++...++...++.|++|++.++...... .++...| .+++||
T Consensus 99 ~g~~~~~~~l-~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wS 177 (719)
T 1z68_A 99 NGEFVRGNEL-PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWS 177 (719)
T ss_dssp TTEECCSSCC-CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEEC
T ss_pred CCccccceec-CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEEC
Confidence 8876211111 23466677876554333335789999999876654332 2332222 489999
Q ss_pred CCCCEEEEEeCCC----------------------------------cEEEEeCCCCcee--------eecccCCCcEEE
Q 010759 347 PTGSLLASCSDDV----------------------------------TAKIWNMKQDKYV--------HDLREHSKEIYT 384 (502)
Q Consensus 347 p~~~~l~sgs~dg----------------------------------~i~iwd~~~~~~~--------~~~~~~~~~i~~ 384 (502)
|||++|++++.|. .|++||+.+++.. ..+..|...+..
T Consensus 178 PDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (719)
T 1z68_A 178 PNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSW 257 (719)
T ss_dssp TTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEE
T ss_pred CCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEE
Confidence 9999999988652 7889999887643 223457778999
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeC--C--CeEEEEe----CCCCeEEEEe----eCCCCCEE-----EEEECCCCCEEEE
Q 010759 385 IRWSPTGSGTNNPNQQLILASASF--D--STVKLWD----VELGKLLYSL----NGHREPVY-----SLAFSPTGEYLAS 447 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~--d--g~i~iwd----~~~~~~~~~~----~~h~~~v~-----~l~~spdg~~las 447 (502)
++|+|++. ++++... + ..|.+|| +.++++...+ .+|...|. .++|+|||+.|+.
T Consensus 258 ~~~SpD~~---------~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 328 (719)
T 1z68_A 258 LTWVTDER---------VCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYK 328 (719)
T ss_dssp EEESSSSE---------EEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEE
T ss_pred eEEeCCCe---------EEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEE
Confidence 99999964 4555332 2 2488899 8777665444 46777776 8899999996654
Q ss_pred --EeCCC--cEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECC-----CeEEEEEee
Q 010759 448 --GSLDK--SMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFAN-----HTVCVLDFR 501 (502)
Q Consensus 448 --gs~Dg--~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~~-----~~v~v~~~~ 501 (502)
+..+| .|.+|++.+++. ..+. +...+..+.++ +|+.|++.+.+ +.+.+|.+.
T Consensus 329 ~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~ 390 (719)
T 1z68_A 329 IFSDKDGYKHIHYIKDTVENA-IQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRIS 390 (719)
T ss_dssp EEECTTSCEEEEEESSCSTTC-EECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEE
T ss_pred EEEccCCceEEEEEECCCCce-EecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEe
Confidence 44555 577777777663 3333 34457777777 88888877765 778888764
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=3.9e-18 Score=166.43 Aligned_cols=265 Identities=13% Similarity=0.124 Sum_probs=177.5
Q ss_pred EEEEEECC--CcEEEEEC--CCceeEeec----CCCCCEEEEEecCCCCEEEEecCCCeEEEEecc-CcceeEEeeec-c
Q 010759 227 LLATGSYD--GQARIWST--NGDLKCTLS----KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK-TEEWKQQFEFH-S 296 (502)
Q Consensus 227 ~l~sg~~d--g~i~iw~~--~~~~~~~~~----~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~-~~~~~~~~~~~-~ 296 (502)
+++.|++. +.|.+|+. .......+. .....+..++|+|++++|++++.+ .|.+|++. +++........ .
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~~~~~~~ 82 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHEASHPIG 82 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEEEEEECC
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEeeEeecC
Confidence 35556553 45777664 222222111 233467789999999999999888 99999997 77655433321 1
Q ss_pred cCeEEEecCCCce--EE-EEc-------------CCCeEEEEEcCC-Ccceeeec----CCCcceeEEEEcCCCCEEEEE
Q 010759 297 GPTLDVDWRNNVS--FA-TSS-------------TDNMIYVCKIGE-NRPIKTFA----GHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 297 ~~~~~~~~~~~~~--~~-~~~-------------~d~~i~~~~~~~-~~~~~~~~----~h~~~v~~v~~~p~~~~l~sg 355 (502)
+.+..+.+.++.. ++ ++. .++.+.+|++.. +.....+. .+...+.+++|+|+|++++++
T Consensus 83 g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~ 162 (365)
T 1jof_A 83 GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSA 162 (365)
T ss_dssp SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEE
T ss_pred CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEE
Confidence 2344566665554 33 332 688999999974 44332222 245678999999999988776
Q ss_pred eC-CCcEEEEeCC-CCcee--eecc--cCCCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCC--CCeEEE--
Q 010759 356 SD-DVTAKIWNMK-QDKYV--HDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVE--LGKLLY-- 424 (502)
Q Consensus 356 s~-dg~i~iwd~~-~~~~~--~~~~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~--~~~~~~-- 424 (502)
.. ++.|++|++. +++.. ..+. .+...+..++|+|+|. +|++++ .++.|.+|++. +++...
T Consensus 163 ~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~---------~l~v~~~~~~~v~v~~~~~~~g~~~~~~ 233 (365)
T 1jof_A 163 DLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGN---------YLYALMEAGNRICEYVIDPATHMPVYTH 233 (365)
T ss_dssp ETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSS---------EEEEEETTTTEEEEEEECTTTCCEEEEE
T ss_pred cCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCC---------EEEEEECCCCeEEEEEEeCCCCcEEEcc
Confidence 54 6799999998 66543 2332 2356689999999986 454444 57899999765 565432
Q ss_pred -Eee-------CCCC------CEEEEE-ECCCCCEEEEEeCCC------cEEEEeCC-CCeeEEE---Eec-CCCEEEEE
Q 010759 425 -SLN-------GHRE------PVYSLA-FSPTGEYLASGSLDK------SMHIWSLK-EGKIVKT---YTG-NGGIFEVC 478 (502)
Q Consensus 425 -~~~-------~h~~------~v~~l~-~spdg~~lasgs~Dg------~i~iw~~~-~~~~~~~---~~~-~~~i~~~~ 478 (502)
.+. +|.. .+..++ |+|||++|++++.+. +|.+|++. +|++... ... ...+..++
T Consensus 234 ~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a 313 (365)
T 1jof_A 234 HSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNA 313 (365)
T ss_dssp EEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCC
T ss_pred ceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccce
Confidence 222 1222 488999 999999988765432 89999996 6765432 322 23456789
Q ss_pred ECC---CCCEEEEEECC-CeEEEEEee
Q 010759 479 WNK---EGDKIAACFAN-HTVCVLDFR 501 (502)
Q Consensus 479 ws~---~g~~la~~~~~-~~v~v~~~~ 501 (502)
|+| ||++|+++..+ ++|.||++.
T Consensus 314 ~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 314 VSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred ecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 999 89999998764 899999874
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.84 E-value=1.4e-18 Score=169.60 Aligned_cols=248 Identities=11% Similarity=0.081 Sum_probs=167.0
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecC-CCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCE--EE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIA-DGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTL--LA 229 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~--l~ 229 (502)
+...+..++|+|+|++|++++.+ .|.+|++. ++.. ..+..... ...+.+++|+|+|++ ++
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~-----------~~~~~~~~-----~g~~~~~~~spdg~~l~~~ 100 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEI-----------VHEASHPI-----GGHPRANDADTNTRAIFLL 100 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEE-----------EEEEEEEC-----CSSGGGGCTTSCCEEEEEE
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCE-----------EEeeEeec-----CCCCccEEECCCCCEEEEE
Confidence 33467899999999999999988 99999986 4421 11111110 112455899999994 55
Q ss_pred EEE-------------CCCcEEEEECC--CceeEeec----CCCCCEEEEEecCCCCEEEEec-CCCeEEEEecc-Ccce
Q 010759 230 TGS-------------YDGQARIWSTN--GDLKCTLS----KHKGPIFSLKWNKKGDYLLTGS-CDKTAIVWDVK-TEEW 288 (502)
Q Consensus 230 sg~-------------~dg~i~iw~~~--~~~~~~~~----~h~~~V~~l~~~~~~~~l~sgs-~D~~v~iwd~~-~~~~ 288 (502)
++. .+|.+.+|++. +.....+. .+...+.+++|+|+|++|+++. .+++|++||+. +++.
T Consensus 101 ~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~ 180 (365)
T 1jof_A 101 AAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEV 180 (365)
T ss_dssp ECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCE
T ss_pred EecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCE
Confidence 553 68999999975 34333332 2556789999999999888765 46899999987 5543
Q ss_pred eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEeCC
Q 010759 289 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMK 367 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~ 367 (502)
..... ..+..|...+..++|+|+|+++++++. ++.|.+|++.
T Consensus 181 ~~~~~-------------------------------------~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 181 ELVGS-------------------------------------VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp EEEEE-------------------------------------EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred EEeee-------------------------------------EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 21000 001113345778999999998877765 7899999765
Q ss_pred --CCcee------eeccc----CCC------cEEEEE-EccCCCCCCCCCCcEEEEEEeC-CC-----eEEEEeCC-CCe
Q 010759 368 --QDKYV------HDLRE----HSK------EIYTIR-WSPTGSGTNNPNQQLILASASF-DS-----TVKLWDVE-LGK 421 (502)
Q Consensus 368 --~~~~~------~~~~~----~~~------~i~~~~-~sp~g~~~~~~~~~~~l~sgs~-dg-----~i~iwd~~-~~~ 421 (502)
+++.. ..+.. +.. .+..++ |+|+|. +|++++. ++ .|.+|++. +++
T Consensus 224 ~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~---------~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 224 PATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK---------YMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS---------EEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCC---------EEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 45432 11211 121 478899 999986 3444332 22 89999986 566
Q ss_pred EEE---EeeCCCCCEEEEEECC---CCCEEEEEeCC-CcEEEEeCCCCe
Q 010759 422 LLY---SLNGHREPVYSLAFSP---TGEYLASGSLD-KSMHIWSLKEGK 463 (502)
Q Consensus 422 ~~~---~~~~h~~~v~~l~~sp---dg~~lasgs~D-g~i~iw~~~~~~ 463 (502)
... .+..+...+..++|+| ||++|++++.+ +.|.+|++....
T Consensus 295 ~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 295 IEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp EEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETTE
T ss_pred EEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchhh
Confidence 543 2333445567899999 89999998875 899999987663
No 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.84 E-value=6.3e-19 Score=186.05 Aligned_cols=280 Identities=10% Similarity=0.047 Sum_probs=187.1
Q ss_pred eccccccceeEEEECCCCCEEEEE--eCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE---------
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASG--SGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT--------- 217 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sg--s~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~--------- 217 (502)
.+.+|...|..++|++++-+++++ +.++...||....+... +.+.. +...|.
T Consensus 18 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------------~~l~~----~~~~~~~~~~~~~~~ 80 (662)
T 3azo_A 18 LVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAE-------------ESALP----APWNVRNRVFEYSGF 80 (662)
T ss_dssp HHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCE-------------EESSC----TTCCBCCCGGGTCCC
T ss_pred HHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCc-------------ceeCC----CCccccccccccCCc
Confidence 467899999999999987777777 66889999986332110 11111 112222
Q ss_pred EEEEC--CCCCE-EEEEEC-CCcEEEEECC--C-ceeEeecC-----CCCCEEEEEecCCCCEEEEecCC----------
Q 010759 218 TLDWN--GEGTL-LATGSY-DGQARIWSTN--G-DLKCTLSK-----HKGPIFSLKWNKKGDYLLTGSCD---------- 275 (502)
Q Consensus 218 ~l~~s--~~~~~-l~sg~~-dg~i~iw~~~--~-~~~~~~~~-----h~~~V~~l~~~~~~~~l~sgs~D---------- 275 (502)
...|+ |||++ |+.++. +..|.+|+.. + .....+.. |...+..++|+|+|++|++++.|
T Consensus 81 ~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~ 160 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVR 160 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEE
T ss_pred cceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCce
Confidence 44555 99998 666554 5667777776 3 44445555 66778999999999999988876
Q ss_pred CeEEEEeccC------cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcCC
Q 010759 276 KTAIVWDVKT------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPT 348 (502)
Q Consensus 276 ~~v~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~ 348 (502)
..|++||+.+ ++ ...+. .+...+..++||||
T Consensus 161 ~~i~~~~~~~~~~~~~~~------------------------------------------~~~l~~~~~~~~~~~~~SpD 198 (662)
T 3azo_A 161 RFLAAVPLDGSAAADRSA------------------------------------------VRELSDDAHRFVTGPRLSPD 198 (662)
T ss_dssp EEEEEEETTSTTTTCGGG------------------------------------------SEESSCSCSSEECCCEECTT
T ss_pred eEEEEEECCCCccccCCc------------------------------------------eeEEEecCCCcccCceECCC
Confidence 3566666554 22 12233 34456777899999
Q ss_pred CCEEEEEeCC--------CcEEEEeCC-CC---ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC--eEEE
Q 010759 349 GSLLASCSDD--------VTAKIWNMK-QD---KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS--TVKL 414 (502)
Q Consensus 349 ~~~l~sgs~d--------g~i~iwd~~-~~---~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg--~i~i 414 (502)
|++|+.++.+ ..|++||+. ++ ........+...+..+.|+|+|. ++++++.++ .|.+
T Consensus 199 G~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~---------l~~~~~~~~~~~l~~ 269 (662)
T 3azo_A 199 GRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGS---------LIVATDRTGWWNLHR 269 (662)
T ss_dssp SSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSC---------EEEEECTTSSCEEEE
T ss_pred CCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCe---------EEEEECCCCCeEEEE
Confidence 9999888755 379999998 56 33333334567899999999986 667778888 6777
Q ss_pred EeCCCCeEEEEeeCCCCC--------EEEEEECCCCCEEEEEeCCCcEEEE--eCCCCeeEEEEecCC-CEEEEEECCCC
Q 010759 415 WDVELGKLLYSLNGHREP--------VYSLAFSPTGEYLASGSLDKSMHIW--SLKEGKIVKTYTGNG-GIFEVCWNKEG 483 (502)
Q Consensus 415 wd~~~~~~~~~~~~h~~~--------v~~l~~spdg~~lasgs~Dg~i~iw--~~~~~~~~~~~~~~~-~i~~~~ws~~g 483 (502)
||+.+++.......+... +.+++|+|+++++++++. +.++|| ++.+++ +..+..+. .+..+ |++++
T Consensus 270 ~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~-~~~l~~~~~~~~~~-~s~~~ 346 (662)
T 3azo_A 270 VDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE-LVDAAGPWTEWAAT-LTVSG 346 (662)
T ss_dssp ECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE-EEECCSSCCEEEEE-EEEET
T ss_pred EECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc-EEEecCCCCeEEEE-EecCC
Confidence 777667654433333222 567999999999999999 999999 555565 45555443 35544 35566
Q ss_pred CEEE--EEECCCeEEEEE
Q 010759 484 DKIA--ACFANHTVCVLD 499 (502)
Q Consensus 484 ~~la--~~~~~~~v~v~~ 499 (502)
+.++ +++.+....||.
T Consensus 347 ~~~~~~~~~~~~~~~i~~ 364 (662)
T 3azo_A 347 TRAVGVAASPRTAYEVVE 364 (662)
T ss_dssp TEEEEEEEETTEEEEEEE
T ss_pred CEEEEEEcCCCCCCEEEE
Confidence 5444 445554444543
No 166
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.84 E-value=2.3e-18 Score=167.63 Aligned_cols=289 Identities=9% Similarity=0.098 Sum_probs=193.7
Q ss_pred CCCEEEEEe------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC-----
Q 010759 165 AGSLLASGS------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY----- 233 (502)
Q Consensus 165 d~~~l~sgs------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~----- 233 (502)
++++++... .|+.|.+||..+++.. ..+.. ...+ .++|+|||++++++..
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~-------------~~i~~----g~~p--~i~~spdg~~lyv~~~~~~~~ 74 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFL-------------GMVPT----AFNG--HVQVSNDGKKIYTMTTYHERI 74 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEE-------------EEEEC----CEEE--EEEECTTSSEEEEEEEEETTS
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEE-------------EEecC----CCCC--ceEECCCCCEEEEEEeccccc
Confidence 455555443 4789999998765421 11111 1123 7899999999999863
Q ss_pred -----CCcEEEEECCC-ceeEeecC------CCCCEEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEE-eeecccC
Q 010759 234 -----DGQARIWSTNG-DLKCTLSK------HKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFHSGP 298 (502)
Q Consensus 234 -----dg~i~iw~~~~-~~~~~~~~------h~~~V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~-~~~~~~~ 298 (502)
++.|.+||... .....+.. +......++|+|+|++|+++.. +++|.+||+.+++.+.. +......
T Consensus 75 ~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~ 154 (361)
T 2oiz_A 75 TRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCW 154 (361)
T ss_dssp SSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEE
T ss_pred ccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcc
Confidence 67899999864 33444432 2234567899999999998864 68999999999987766 4322111
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCC-Ccce------eeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPI------KTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~------~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
...+.......+++.+.|+.+..++... ++.. ..+..+..++ .+.++|++..++..+.++.+.++|+.....
T Consensus 155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 155 SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSSC
T ss_pred eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCCc
Confidence 1112222345777888889988888754 3332 1222222222 233467787777788899999999865432
Q ss_pred e--eeccc------C----CCcEEEEEEccCCCCCCCCCCcEEEEEEe----------CCCeEEEEeCCCCeEEEEeeCC
Q 010759 372 V--HDLRE------H----SKEIYTIRWSPTGSGTNNPNQQLILASAS----------FDSTVKLWDVELGKLLYSLNGH 429 (502)
Q Consensus 372 ~--~~~~~------~----~~~i~~~~~sp~g~~~~~~~~~~~l~sgs----------~dg~i~iwd~~~~~~~~~~~~h 429 (502)
. ..+.. + ......++++|++. .++++.+ ..+.|.+||+.+++.+.++..+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~--------~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~ 305 (361)
T 2oiz_A 234 KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASG--------RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR 305 (361)
T ss_dssp EEEEEEESCCHHHHHTTCEECCSSCEEEETTTT--------EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT
T ss_pred eecccccccCccccccccccCCeeEEEEecCCC--------eEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC
Confidence 1 11110 0 01111256777764 2333333 1358999999999999999887
Q ss_pred CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC--eeEEEEec-CCCEEEEEECCCCC
Q 010759 430 REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG--KIVKTYTG-NGGIFEVCWNKEGD 484 (502)
Q Consensus 430 ~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~--~~~~~~~~-~~~i~~~~ws~~g~ 484 (502)
. +.+|+|+|||++|++++. +.|.+||..++ +++.++.. ......++++|+|.
T Consensus 306 ~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 306 D--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp T--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred C--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 6 899999999999998887 99999999999 99988743 44578999999985
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.83 E-value=7e-19 Score=173.23 Aligned_cols=272 Identities=11% Similarity=0.040 Sum_probs=180.1
Q ss_pred CeEEEEECCCCCEEEEEECC---CcEEEEECCCceeEeecCCCCCEE-EEEecCCCCEEEEecCCCeEEEEeccCcceeE
Q 010759 215 DVTTLDWNGEGTLLATGSYD---GQARIWSTNGDLKCTLSKHKGPIF-SLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQ 290 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~d---g~i~iw~~~~~~~~~~~~h~~~V~-~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~ 290 (502)
.+..++|||||++|+..... ..|.+|+..+.....+..+...+. .+.|+|+|++|+.++.++.|++||+.+++...
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~ 116 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQV 116 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEE
Confidence 36678899999998877543 468888887665555544444433 37899999999999999999999999887665
Q ss_pred EeeecccCeEE-------------------EecCCCc-eEEEE-----cCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 291 QFEFHSGPTLD-------------------VDWRNNV-SFATS-----STDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 291 ~~~~~~~~~~~-------------------~~~~~~~-~~~~~-----~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
.+..+...... ..|..+. .++.. ..+..|++|++..+...... .+...+..+.|
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~ 195 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIY 195 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeec-cCCcccccceE
Confidence 55433321111 1122111 11111 34567899999877654443 46667889999
Q ss_pred cC-CCCEEEEEeCC------CcEEEEeCCCCceeeecccC--CCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----Ce
Q 010759 346 DP-TGSLLASCSDD------VTAKIWNMKQDKYVHDLREH--SKEIYTIRWSPTGSGTNNPNQQLILASASFD-----ST 411 (502)
Q Consensus 346 ~p-~~~~l~sgs~d------g~i~iwd~~~~~~~~~~~~~--~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~ 411 (502)
+| ++..|+..+.+ ..|.+|++..+.... +..+ ...+..+.|+|+|. .|+.++.+ +.
T Consensus 196 sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~~~~~spdg~---------~l~~~~~~~~~~~~~ 265 (396)
T 3c5m_A 196 RPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCTHEFWIPDGS---------AMAYVSYFKGQTDRV 265 (396)
T ss_dssp ETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEEEEEECTTSS---------CEEEEEEETTTCCEE
T ss_pred CCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCccccceEECCCCC---------EEEEEecCCCCccce
Confidence 99 78877766553 358888887654332 2222 23578899999986 23333332 45
Q ss_pred EEEEeCCCCeEEEEeeCCCCCEEEEEECC-CCCEEEEEe----------------CCCcEEEEeCCCCeeEEEEecCC--
Q 010759 412 VKLWDVELGKLLYSLNGHREPVYSLAFSP-TGEYLASGS----------------LDKSMHIWSLKEGKIVKTYTGNG-- 472 (502)
Q Consensus 412 i~iwd~~~~~~~~~~~~h~~~v~~l~~sp-dg~~lasgs----------------~Dg~i~iw~~~~~~~~~~~~~~~-- 472 (502)
|++||+.+++...... .. .+. ++|+| +|++|++++ .++.|++|++.+++.........
T Consensus 266 l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~ 342 (396)
T 3c5m_A 266 IYKANPETLENEEVMV-MP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSW 342 (396)
T ss_dssp EEEECTTTCCEEEEEE-CC-SEE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEEECCCCC
T ss_pred EEEEECCCCCeEEeee-CC-CCC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEccCCCCcc
Confidence 9999998886543322 11 233 89999 999988765 34789999998887544333332
Q ss_pred ---------CEEEEEECCCCCEEEEEEC-CCeEEEEEe
Q 010759 473 ---------GIFEVCWNKEGDKIAACFA-NHTVCVLDF 500 (502)
Q Consensus 473 ---------~i~~~~ws~~g~~la~~~~-~~~v~v~~~ 500 (502)
.+..++|+|||++|++++. ++...||.+
T Consensus 343 ~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~ 380 (396)
T 3c5m_A 343 DVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIA 380 (396)
T ss_dssp CCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEE
T ss_pred ccccccccCCCCCceEccCCCeEEEEecCCCCceEEEE
Confidence 1567899999999988775 455555543
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.82 E-value=1.7e-17 Score=159.36 Aligned_cols=247 Identities=12% Similarity=0.144 Sum_probs=183.2
Q ss_pred CCCeEEEEECCCCCEEEEEECC------------------------CcEEEEECC-CceeEeec-CCCCCEEEEEecCCC
Q 010759 213 SKDVTTLDWNGEGTLLATGSYD------------------------GQARIWSTN-GDLKCTLS-KHKGPIFSLKWNKKG 266 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~d------------------------g~i~iw~~~-~~~~~~~~-~h~~~V~~l~~~~~~ 266 (502)
-..|.+++++++|+++++...+ +.|.+||.. +.....+. ++-....+++++|+|
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4579999999999999988877 479999986 55444443 344578999999999
Q ss_pred CEEEEecCCCeEEEEeccCcc-eeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 267 DYLLTGSCDKTAIVWDVKTEE-WKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 267 ~~l~sgs~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
+.+++.+.++.|++||..... .+..+..... ...-.++-.....+++
T Consensus 103 ~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~--------------------------------~g~~~~~~~~P~~ia~ 150 (329)
T 3fvz_A 103 NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ--------------------------------PGSDQNHFCQPTDVAV 150 (329)
T ss_dssp CEEEEETTTTEEEEECTTCSSCCSEEESBTTB--------------------------------CCCSTTCCSSEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCCCeEEEEEecccCC--------------------------------CCCCccccCCCcEEEE
Confidence 988999999999999975432 2221110000 0000123446789999
Q ss_pred cC-CCCEEEEEe-CCCcEEEEeCCCCceeeecccC----------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 346 DP-TGSLLASCS-DDVTAKIWNMKQDKYVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 346 ~p-~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~~----------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
+| ++.++++.+ .++.|++|+ ..+..+..+... ......++++|++. .++++...++.|+
T Consensus 151 ~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g--------~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 151 EPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD--------QLCVADRENGRIQ 221 (329)
T ss_dssp CTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT--------EEEEEETTTTEEE
T ss_pred eCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC--------EEEEEECCCCEEE
Confidence 99 888888887 699999999 456666555322 23378899998732 2677778899999
Q ss_pred EEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEE-------eCCCcEEEEeCCCCeeEEEEec----CCCEEEEEEC
Q 010759 414 LWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASG-------SLDKSMHIWSLKEGKIVKTYTG----NGGIFEVCWN 480 (502)
Q Consensus 414 iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasg-------s~Dg~i~iw~~~~~~~~~~~~~----~~~i~~~~ws 480 (502)
+||..+++.+..+. .+...+.+++|+| +..+++. +.+..|++|++.+++++.++.. ...+.+++++
T Consensus 222 ~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~ 300 (329)
T 3fvz_A 222 CFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVAS 300 (329)
T ss_dssp EEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEEC
T ss_pred EEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEEC
Confidence 99999899888874 4567789999999 4444333 3455899999999999988742 3358999999
Q ss_pred CCCCEEEEEECCCeEEEEEee
Q 010759 481 KEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 481 ~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+|+.+++...+++|.+|++.
T Consensus 301 ~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 301 EDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp TTSEEEEEESSSCCEEEEEEE
T ss_pred CCCCEEEEECCCCEEEEEeCC
Confidence 999888899999999999874
No 169
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.82 E-value=4.5e-17 Score=153.06 Aligned_cols=236 Identities=14% Similarity=0.264 Sum_probs=176.5
Q ss_pred CCCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeec------CCCCCEEEEEe-cCCCCEEEEecC-CCeEEEEec
Q 010759 212 KSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLS------KHKGPIFSLKW-NKKGDYLLTGSC-DKTAIVWDV 283 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~------~h~~~V~~l~~-~~~~~~l~sgs~-D~~v~iwd~ 283 (502)
+...+.+++++++|+++++...++.|.+|+..+.....+. +|...+.++++ .+++..+++... ++.|.+||.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~ 107 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQ 107 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECT
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCCCcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECC
Confidence 3456889999999999988888999999998876655553 24457899999 567766666643 889999984
Q ss_pred cCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
+++....+. ..+...+.+++++|+|+++++...++.|.+
T Consensus 108 -~g~~~~~~~----------------------------------------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 146 (286)
T 1q7f_A 108 -YGQFVRKFG----------------------------------------ATILQHPRGVTVDNKGRIIVVECKVMRVII 146 (286)
T ss_dssp -TSCEEEEEC----------------------------------------TTTCSCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred -CCcEEEEec----------------------------------------CccCCCceEEEEeCCCCEEEEECCCCEEEE
Confidence 444322110 012345678999999998888888899999
Q ss_pred EeCCCCceeeecc--cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--CCCEEEEEEC
Q 010759 364 WNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--REPVYSLAFS 439 (502)
Q Consensus 364 wd~~~~~~~~~~~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~~~v~~l~~s 439 (502)
||.. ++.+..+. .+...+..++++|++. ++++.+.++.|++||.. ++.+..+..+ ...+..|+++
T Consensus 147 ~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~---------l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d 215 (286)
T 1q7f_A 147 FDQN-GNVLHKFGCSKHLEFPNGVVVNDKQE---------IFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVGIN 215 (286)
T ss_dssp ECTT-SCEEEEEECTTTCSSEEEEEECSSSE---------EEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEEEC
T ss_pred EcCC-CCEEEEeCCCCccCCcEEEEECCCCC---------EEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEEEC
Confidence 9964 44444443 3345688999999874 56677778999999974 5666666543 3678999999
Q ss_pred CCCCEEEEEeCCC-cEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 440 PTGEYLASGSLDK-SMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 440 pdg~~lasgs~Dg-~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+|+++++...++ .|.+|+. +++.+..+... ..+.+++|+|+|+++++ ..+++|.||++.
T Consensus 216 ~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~ 279 (286)
T 1q7f_A 216 SNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYV 279 (286)
T ss_dssp TTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECS
T ss_pred CCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcc
Confidence 9999999888886 9999995 56666666543 23789999999987777 578999999864
No 170
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.81 E-value=2.3e-17 Score=158.56 Aligned_cols=249 Identities=12% Similarity=0.177 Sum_probs=183.3
Q ss_pred ccceeEEEECCCCCEEEEEeCC------------------------CcEEEEecCCCCCCCCCCCCCceEEEEEeeeccc
Q 010759 154 TSEVCACAWSPAGSLLASGSGD------------------------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT 209 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D------------------------~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (502)
.+.|.+++++|+|+++++.+.+ +.|.+||..++... ... +
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~-------------~~~-~-- 86 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEIL-------------QSS-G-- 86 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEE-------------EEE-C--
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEE-------------ecc-C--
Confidence 3569999999999999998887 46888887655321 111 1
Q ss_pred ccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCCc--eeEee---------cCCCCCEEEEEecC-CCCEEEEec-CCC
Q 010759 210 NEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNGD--LKCTL---------SKHKGPIFSLKWNK-KGDYLLTGS-CDK 276 (502)
Q Consensus 210 ~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~--~~~~~---------~~h~~~V~~l~~~~-~~~~l~sgs-~D~ 276 (502)
..+......++++++|+++++...++.|++|+..+. ....+ ..+-....+|+++| ++..+++.+ .++
T Consensus 87 ~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~ 166 (329)
T 3fvz_A 87 KNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNS 166 (329)
T ss_dssp TTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCC
T ss_pred CCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCC
Confidence 122346889999999999988888999999998776 44444 23445689999999 788888886 699
Q ss_pred eEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEEEEE
Q 010759 277 TAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLLASC 355 (502)
Q Consensus 277 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l~sg 355 (502)
.|++||. ++.....+...... + . ...++-.....++++|+ +.++++.
T Consensus 167 ~I~~~~~-~g~~~~~~~~~g~~-----------------~---------~-----~~~~~~~~p~gia~d~~~g~l~v~d 214 (329)
T 3fvz_A 167 RIVQFSP-SGKFVTQWGEESSG-----------------S---------S-----PRPGQFSVPHSLALVPHLDQLCVAD 214 (329)
T ss_dssp EEEEECT-TSCEEEEECEECCS-----------------S---------S-----CCTTEESCEEEEEEETTTTEEEEEE
T ss_pred eEEEEcC-CCCEEEEeccCCCC-----------------C---------C-----CCCcccCCCcEEEEECCCCEEEEEE
Confidence 9999994 45444333211000 0 0 00112234678999998 7888888
Q ss_pred eCCCcEEEEeCCCCceeeecc--cCCCcEEEEEEccCCCCCCCCCCcEEEEE-------EeCCCeEEEEeCCCCeEEEEe
Q 010759 356 SDDVTAKIWNMKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILAS-------ASFDSTVKLWDVELGKLLYSL 426 (502)
Q Consensus 356 s~dg~i~iwd~~~~~~~~~~~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~s-------gs~dg~i~iwd~~~~~~~~~~ 426 (502)
..++.|++|+..+++.+..+. .+...++.++|+| +. ++++ .+.+..|++||+.+++.+..+
T Consensus 215 ~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~---------~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 215 RENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GF---------LFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp TTTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TE---------EEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CE---------EEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 889999999998888887763 3556788999998 31 2222 233458999999999999887
Q ss_pred ---eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 427 ---NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 427 ---~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
.++...+..|+++|+|.++++...+++|++|++.
T Consensus 285 ~~~~~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~ 321 (329)
T 3fvz_A 285 KPVRKHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLT 321 (329)
T ss_dssp CCSSSCCSSEEEEEECTTSEEEEEESSSCCEEEEEEE
T ss_pred cCCCCccCCeeEEEECCCCCEEEEECCCCEEEEEeCC
Confidence 3677789999999999888999999999999975
No 171
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.81 E-value=1.2e-16 Score=150.15 Aligned_cols=247 Identities=13% Similarity=0.216 Sum_probs=177.5
Q ss_pred ccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE-CCCCCEEEE
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-NGEGTLLAT 230 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~-s~~~~~l~s 230 (502)
+|...+.+++++|+|+++++.+.++.|.+|+... .. ...+. ..+....+...+..+++ .+++.++++
T Consensus 27 g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g-~~----------~~~~~-~~~~~~~~~~~p~~i~~~~~~g~l~v~ 94 (286)
T 1q7f_A 27 GQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG-RF----------KFQFG-ECGKRDSQLLYPNRVAVVRNSGDIIVT 94 (286)
T ss_dssp TCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS-CE----------EEEEC-CBSSSTTCBSSEEEEEEETTTTEEEEE
T ss_pred CccCCCceEEECCCCCEEEEECCCCEEEEECCCC-cE----------EEEec-ccCCCcccccCceEEEEEcCCCeEEEE
Confidence 5667789999999999999988999999999652 21 00000 01111123346889999 577777776
Q ss_pred EEC-CCcEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 231 GSY-DGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 231 g~~-dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
... ++.|++|+..+.....+. .+...+.+++++|+++.+++.+.++.|.+||.. +.....+.
T Consensus 95 ~~~~~~~i~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~--------------- 158 (286)
T 1q7f_A 95 ERSPTHQIQIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFG--------------- 158 (286)
T ss_dssp ECGGGCEEEEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEE---------------
T ss_pred cCCCCCEEEEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeC---------------
Confidence 644 899999997777665553 344568999999999988888888999999964 32221110
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC--CCcEEEEE
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH--SKEIYTIR 386 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~--~~~i~~~~ 386 (502)
..++...+.+++++|+|+++++.+.++.|++||.. +..+..+..+ ...+..++
T Consensus 159 ------------------------~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~ 213 (286)
T 1q7f_A 159 ------------------------CSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQYLRQIGGEGITNYPIGVG 213 (286)
T ss_dssp ------------------------CTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCEEEEESCTTTSCSEEEEE
T ss_pred ------------------------CCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCEEEEEccCCccCCCcEEE
Confidence 01233457889999999988888889999999974 4555555433 35688999
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCC-eEEEEeCCCCeEEEEeeCCC--CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 387 WSPTGSGTNNPNQQLILASASFDS-TVKLWDVELGKLLYSLNGHR--EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
++|+|. ++++...++ .|++||. .++.+..+..+. ..+.+++|+|+|+++++ +.|++|++|++...
T Consensus 214 ~d~~G~---------l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 214 INSNGE---------ILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp ECTTCC---------EEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred ECCCCC---------EEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999885 566666665 9999996 466666665443 34789999999987777 67999999998653
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.79 E-value=9.5e-18 Score=165.09 Aligned_cols=277 Identities=10% Similarity=-0.016 Sum_probs=176.1
Q ss_pred ceeEEEECCCCCEEEEEeCC---CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 156 EVCACAWSPAGSLLASGSGD---STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D---~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
.+..++|||||++||..+.. ..|.+|++.++.. ..+.. ........+.|+|||++|+.++
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~--------------~~l~~---~~~~~~~~~~~spdg~~l~~~~ 99 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQA--------------VQLTE---GKGDNTFGGFISTDERAFFYVK 99 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEE--------------EECCC---SSCBCTTTCEECTTSSEEEEEE
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcE--------------EEeec---CCCCccccceECCCCCEEEEEE
Confidence 37888999999998776543 3678888765431 11110 1111223378999999999999
Q ss_pred CCCcEEEEECCCceeE-eecCCCCCEEE-------------------EEecCCCCEEEEe-----cCCCeEEEEeccCcc
Q 010759 233 YDGQARIWSTNGDLKC-TLSKHKGPIFS-------------------LKWNKKGDYLLTG-----SCDKTAIVWDVKTEE 287 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~-~~~~h~~~V~~-------------------l~~~~~~~~l~sg-----s~D~~v~iwd~~~~~ 287 (502)
.++.|++|+..+.... ....+...... +.|+|+++.++.+ ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (396)
T 3c5m_A 100 NELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE 179 (396)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC
T ss_pred cCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc
Confidence 9999999998754333 33333332222 3567777766544 356789999999887
Q ss_pred eeEEeeecccCeEEEecCC--CceEEEEcCC------CeEEEEEcCCCcceeeecCC-CcceeEEEEcCCCCEEEEEeCC
Q 010759 288 WKQQFEFHSGPTLDVDWRN--NVSFATSSTD------NMIYVCKIGENRPIKTFAGH-QGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~d------~~i~~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~l~sgs~d 358 (502)
..... .+...+..+.|.+ ...++..+.+ ..|+++++............ ...+..++|+|+|+.|+.++.+
T Consensus 180 ~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~ 258 (396)
T 3c5m_A 180 LEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYF 258 (396)
T ss_dssp EEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEE
T ss_pred EEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecC
Confidence 65544 3445566677765 3334443322 46888888665433333321 2357889999999987776554
Q ss_pred -----CcEEEEeCCCCceeeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEe----------------CCCeEEEEe
Q 010759 359 -----VTAKIWNMKQDKYVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASAS----------------FDSTVKLWD 416 (502)
Q Consensus 359 -----g~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs----------------~dg~i~iwd 416 (502)
+.|.+||+.+++...... .. ... +.|+| +|. ++++++ .++.|++||
T Consensus 259 ~~~~~~~l~~~d~~~g~~~~l~~-~~-~~~-~~~s~~dg~---------~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d 326 (396)
T 3c5m_A 259 KGQTDRVIYKANPETLENEEVMV-MP-PCS-HLMSNFDGS---------LMVGDGCDAPVDVADADSYNIENDPFLYVLN 326 (396)
T ss_dssp TTTCCEEEEEECTTTCCEEEEEE-CC-SEE-EEEECSSSS---------EEEEEECCC----------CCCCCCEEEEEE
T ss_pred CCCccceEEEEECCCCCeEEeee-CC-CCC-CCccCCCCc---------eEEEecCCcceeeccccccccCCCCcEEEEe
Confidence 459999998876533221 11 223 88998 875 444433 347899999
Q ss_pred CCCCeEEEEeeCCCC-----------CEEEEEECCCCCEEEEEeC-CCcEEEE--eCCCCe
Q 010759 417 VELGKLLYSLNGHRE-----------PVYSLAFSPTGEYLASGSL-DKSMHIW--SLKEGK 463 (502)
Q Consensus 417 ~~~~~~~~~~~~h~~-----------~v~~l~~spdg~~lasgs~-Dg~i~iw--~~~~~~ 463 (502)
+.+++.. .+..+.. .+..++|+|+|++|+.++. ++...|| ++.++.
T Consensus 327 ~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 327 TKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp TTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred cccCceE-EccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 9877643 3444443 2567899999999887765 4555555 444443
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.78 E-value=1.4e-16 Score=153.07 Aligned_cols=266 Identities=11% Similarity=0.103 Sum_probs=190.7
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
..|.+++|++++..+++.+.++.++.| .+.....+..+...+.+++|+|+++.++++..++.|.+||+.+++......
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~ 83 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTI--TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFV 83 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEE--ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEE
T ss_pred cccceeeecCCccceeEEeecccCccc--ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEee
Confidence 457778899988888777888999999 334455566677778999999999988888999999999998887665443
Q ss_pred ecccCeEEEecCCCc-eEEEEcCC----CeEEEEEcCCCcceeeec--CCCcceeEEEEcCCCCEEEEEeC------CCc
Q 010759 294 FHSGPTLDVDWRNNV-SFATSSTD----NMIYVCKIGENRPIKTFA--GHQGEVNCVKWDPTGSLLASCSD------DVT 360 (502)
Q Consensus 294 ~~~~~~~~~~~~~~~-~~~~~~~d----~~i~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~l~sgs~------dg~ 360 (502)
.+...+..+.+..+. .+++...+ +.|++|+.........+. .+...+.+++++|+|+++++... .+.
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~ 163 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGG 163 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCce
Confidence 445667788876544 44555555 589999987765443332 23457899999999998887654 355
Q ss_pred EEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeEEE--------EeeCCCC
Q 010759 361 AKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKLLY--------SLNGHRE 431 (502)
Q Consensus 361 i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~~~--------~~~~h~~ 431 (502)
|..|+..+++... +......+..++|+|++. .++++.+.++.|.+||+.. +..+. .+.++ .
T Consensus 164 l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~--------~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~ 233 (333)
T 2dg1_A 164 VYYVSPDFRTVTP-IIQNISVANGIALSTDEK--------VLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-E 233 (333)
T ss_dssp EEEECTTSCCEEE-EEEEESSEEEEEECTTSS--------EEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-S
T ss_pred EEEEeCCCCEEEE-eecCCCcccceEECCCCC--------EEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-C
Confidence 6666665544332 222334578899999875 2445556688999999863 33221 12222 4
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-------CEEEEEECCCCCEEEEEECC
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-------GIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-------~i~~~~ws~~g~~la~~~~~ 492 (502)
.+..++++++|.++++...++.|.+|+. +++.+..+.... .+.+++|+|||+.|.+++.+
T Consensus 234 ~~~~i~~d~~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 234 GPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp EEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred CCCceEECCCCCEEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 6788999999999888888899999998 566666665432 47899999999888766665
No 174
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.78 E-value=2.5e-17 Score=175.93 Aligned_cols=318 Identities=11% Similarity=0.106 Sum_probs=192.9
Q ss_pred eeeccccccc-----eeEEEECCCCCEEEEEeCC---------CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccC
Q 010759 147 VTILEGHTSE-----VCACAWSPAGSLLASGSGD---------STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK 212 (502)
Q Consensus 147 ~~~l~~H~~~-----V~~~~~spd~~~l~sgs~D---------~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (502)
..++.+|... ...++|||||++|+.++.+ +.+.+||+.++... . ...+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~--------------~----l~~~ 110 (740)
T 4a5s_A 49 SVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLI--------------T----EERI 110 (740)
T ss_dssp EEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEEC--------------C----SSCC
T ss_pred EEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEE--------------E----cccC
Confidence 3456666543 2447899999999999876 55679999876421 1 1123
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEee--cCCCCCE-----------------EEEEecCCCCEEEEec
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTL--SKHKGPI-----------------FSLKWNKKGDYLLTGS 273 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~--~~h~~~V-----------------~~l~~~~~~~~l~sgs 273 (502)
...+...+|||||+.|+.+. ++.|++|+..+.....+ .++...+ .++.|+|+|++|+.++
T Consensus 111 ~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 111 PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQ 189 (740)
T ss_dssp CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEE
T ss_pred CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEE
Confidence 45689999999999999884 68999999865433332 3333333 2489999999999888
Q ss_pred CCCe-EEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC---Cc--ceeeec------CCCccee
Q 010759 274 CDKT-AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE---NR--PIKTFA------GHQGEVN 341 (502)
Q Consensus 274 ~D~~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~---~~--~~~~~~------~h~~~v~ 341 (502)
.|.+ +.+|++....... .+......+.+..... ......|++|++.+ +. ....+. +|...+.
T Consensus 190 ~d~~~v~~~~~~~~~~~~---~~~~~~~~~~yp~~G~---~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 190 FNDTEVPLIEYSFYSDES---LQYPKTVRVPYPKAGA---VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EECTTCCEEEEEECCSTT---CSSCEEEEEECCBTTS---CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEE
T ss_pred EcccCCceEEEEeecCCC---CCCCcceeecCCCCcC---cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEE
Confidence 7765 8888753211000 0111122222221100 01122688999987 62 222333 4788899
Q ss_pred EEEEcCCCCEEEEEeC----CCcEEEEeCCCCc----eee--ec--ccCCCcEE-----EEEEccCCCCCCCCCCcEEEE
Q 010759 342 CVKWDPTGSLLASCSD----DVTAKIWNMKQDK----YVH--DL--REHSKEIY-----TIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~----dg~i~iwd~~~~~----~~~--~~--~~~~~~i~-----~~~~sp~g~~~~~~~~~~~l~ 404 (502)
.++|+|||++++.... +..|++||+.+++ +.. .+ ..+...+. .+.|+|+|. .++.
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~--------~l~~ 335 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGN--------SFYK 335 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSS--------EEEE
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCC--------EEEE
Confidence 9999999997665533 3479999998876 221 11 23443333 678999986 2332
Q ss_pred EEe-CCC--eEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEE-EEeC----CCcEEEEe--CCCCeeEEEEec----
Q 010759 405 SAS-FDS--TVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLA-SGSL----DKSMHIWS--LKEGKIVKTYTG---- 470 (502)
Q Consensus 405 sgs-~dg--~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~la-sgs~----Dg~i~iw~--~~~~~~~~~~~~---- 470 (502)
..+ .+| .|++||+..+... .+......|..+.+ +|++.|+ +++. .+..+||. +..+.....++.
T Consensus 336 ~~s~~~G~~~l~~~~~~~~~~~-~lT~g~~~v~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~~~~~~lt~~~~~ 413 (740)
T 4a5s_A 336 IISNEEGYRHICYFQIDKKDCT-FITKGTWEVIGIEA-LTSDYLYYISNEYKGMPGGRNLYKIQLIDYTKVTCLSCELNP 413 (740)
T ss_dssp EEECTTSCEEEEEEETTCSSCE-ESCCSSSCEEEEEE-ECSSEEEEEESCGGGCTTCBEEEEEETTEEEEEEESSTTTST
T ss_pred EEEcCCCceEEEEEECCCCceE-ecccCCEEEEEEEE-EeCCEEEEEEecCCCCCceeEEEEEECCCCCcceeeccccCC
Confidence 444 444 6888898866554 44444555666542 4465554 4444 23445554 444333323332
Q ss_pred -CCCEEEEEECCCCCEEEEEECC---CeEEEEE
Q 010759 471 -NGGIFEVCWNKEGDKIAACFAN---HTVCVLD 499 (502)
Q Consensus 471 -~~~i~~~~ws~~g~~la~~~~~---~~v~v~~ 499 (502)
...+..++|||+|++++....+ ..+.+++
T Consensus 414 ~~~~~~~~~~S~dg~~~~~~~s~~~~p~~~l~~ 446 (740)
T 4a5s_A 414 ERCQYYSVSFSKEAKYYQLRCSGPGLPLYTLHS 446 (740)
T ss_dssp TTBCBEEEEECTTSSEEEEEECSBSSCEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEeCCCCCCEEEEEE
Confidence 2467899999999988766544 2445544
No 175
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.77 E-value=2.5e-15 Score=153.76 Aligned_cols=310 Identities=14% Similarity=0.090 Sum_probs=210.1
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEEC-
Q 010759 164 PAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWST- 242 (502)
Q Consensus 164 pd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~- 242 (502)
|.+.++++...+++|.++|..+++.. ..+.. ...+..+.|+|||+++++++.++.|.+||+
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~-------------~~i~~-----g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~ 226 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIK-------------TVLDT-----GYAVHISRLSASGRYLFVIGRDGKVNMIDLW 226 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEE-------------EEEEC-----SSCEEEEEECTTSCEEEEEETTSEEEEEETT
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEE-------------EEEeC-----CCCccceEECCCCCEEEEEcCCCeEEEEECC
Confidence 44557777888999999998776421 11111 234678999999999999999999999998
Q ss_pred --CCceeEeecCCCCCEEEEEec----CCCCEEEEec-CCCeEEEEeccCcceeEEeeecc----------c-CeEEEec
Q 010759 243 --NGDLKCTLSKHKGPIFSLKWN----KKGDYLLTGS-CDKTAIVWDVKTEEWKQQFEFHS----------G-PTLDVDW 304 (502)
Q Consensus 243 --~~~~~~~~~~h~~~V~~l~~~----~~~~~l~sgs-~D~~v~iwd~~~~~~~~~~~~~~----------~-~~~~~~~ 304 (502)
.......+.... ....++|+ |+|+++++++ .+++|.++|..+.+.+..+.... . .+..+..
T Consensus 227 ~~t~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 227 MKEPTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp SSSCCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred CCCCcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 344555555433 35789999 6999877655 45999999999998887665321 1 2223322
Q ss_pred C--CCceEEEEcCCCeEEEEEcCCCcceeee-cCCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeeeccc---
Q 010759 305 R--NNVSFATSSTDNMIYVCKIGENRPIKTF-AGHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLRE--- 377 (502)
Q Consensus 305 ~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~--- 377 (502)
. ....++.....+.|.+++.......... .........+.|+|+|++|+++. .+++|.++|+.+++.+..+..
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~ 385 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQ 385 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSS
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCc
Confidence 2 2233445566788888888664322211 12233466789999999876655 578999999999987665433
Q ss_pred --CCCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCC-------CeEEEEeeCCCCCEEEEEECCCCCEEEE
Q 010759 378 --HSKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVEL-------GKLLYSLNGHREPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 378 --~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~-------~~~~~~~~~h~~~v~~l~~spdg~~las 447 (502)
|.+....+ ++|++. .+.+++. .+++|.++|... .+.+.++......-..|.++|++++|..
T Consensus 386 ~Phpg~g~~~-~~p~~g--------~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v 456 (567)
T 1qks_A 386 TPHPGRGANF-VHPTFG--------PVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYV 456 (567)
T ss_dssp SBCCTTCEEE-EETTTE--------EEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEE
T ss_pred CCCCccceee-ECCCCC--------cEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEE
Confidence 22111111 355532 2455553 568999999987 6788888765433345788999999887
Q ss_pred EeC-------CCcEEEEeCCCC-----ee-EEEEe---------cCCCEEEEEECCCCCEEEEEEC-----CCeEEEEEe
Q 010759 448 GSL-------DKSMHIWSLKEG-----KI-VKTYT---------GNGGIFEVCWNKEGDKIAACFA-----NHTVCVLDF 500 (502)
Q Consensus 448 gs~-------Dg~i~iw~~~~~-----~~-~~~~~---------~~~~i~~~~ws~~g~~la~~~~-----~~~v~v~~~ 500 (502)
... .++|.+||+.+. .. ...+. +...+..+.|+|+|+++.++.+ ++.|.|+|-
T Consensus 457 ~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~ 536 (567)
T 1qks_A 457 DATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDD 536 (567)
T ss_dssp ECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEET
T ss_pred ecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEEC
Confidence 663 359999999876 21 12221 2345899999999998877644 688999985
Q ss_pred e
Q 010759 501 R 501 (502)
Q Consensus 501 ~ 501 (502)
+
T Consensus 537 ~ 537 (567)
T 1qks_A 537 K 537 (567)
T ss_dssp T
T ss_pred C
Confidence 3
No 176
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=3.8e-16 Score=150.87 Aligned_cols=258 Identities=14% Similarity=0.148 Sum_probs=174.1
Q ss_pred ceeEEEECCCCCEEEEEe---------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 156 EVCACAWSPAGSLLASGS---------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs---------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
.+...+| ||++||... .++.|.+|++.++.. +.+ ..+..++|||||+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~--------------~~l--------~~~~~~~~SpDg~ 71 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNAR--------------RFI--------ENATMPRISPDGK 71 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE--------------EEE--------ESCEEEEECTTSS
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCce--------------EEc--------ccCCCeEECCCCC
Confidence 4667777 888776542 256789999876531 111 2478899999999
Q ss_pred EEEEEECC---C--cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC--------------------------
Q 010759 227 LLATGSYD---G--QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD-------------------------- 275 (502)
Q Consensus 227 ~l~sg~~d---g--~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D-------------------------- 275 (502)
+|+.++.+ + .|.+|+..+.....+..+.. +..++|+|+|+.|+.++.+
T Consensus 72 ~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 150 (347)
T 2gop_A 72 KIAFMRANEEKKVSEIWVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGE 150 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------C
T ss_pred EEEEEEeccCCCcceEEEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCc
Confidence 99887754 3 37777877654444443444 9999999999998887643
Q ss_pred -CeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCC---------CeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 276 -KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD---------NMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 276 -~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d---------~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
..|.+||+.+++....+.. . .+..+.|.++..++++..+ ..|++++ .+. ...+..+ ..+..+
T Consensus 151 ~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~-~~~~~~-- 222 (347)
T 2gop_A 151 KTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK-VSFYAV-- 222 (347)
T ss_dssp EEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE-ESEEEE--
T ss_pred cceEEEEECCCCeEEeeecC-C-CcccccCCCCeEEEEEecccccccccccccEEEeC--CCc-eEEeccC-cceeeE--
Confidence 5799999998876444444 3 5666777665533444332 2455555 333 3344444 555444
Q ss_pred cCCCCEEEEEeCC--------CcEEEEeCCCCceeeecccCCCcEEE-EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEe
Q 010759 346 DPTGSLLASCSDD--------VTAKIWNMKQDKYVHDLREHSKEIYT-IRWSPTGSGTNNPNQQLILASASFDSTVKLWD 416 (502)
Q Consensus 346 ~p~~~~l~sgs~d--------g~i~iwd~~~~~~~~~~~~~~~~i~~-~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd 416 (502)
+|+|+.|+.++.+ ..|.+|| +++.......+...+.. +.|+ ++ ++++++.++.++||
T Consensus 223 spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg----------~~~~~~~~~~~~l~- 288 (347)
T 2gop_A 223 DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK----------VYFTLFEEGSVNLY- 288 (347)
T ss_dssp EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE----------EEEEEEETTEEEEE-
T ss_pred CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc----------EEEEEecCCcEEEE-
Confidence 9999998877754 3677887 55544444455667776 8897 64 57788899999999
Q ss_pred CCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcE-EEEeCCCCee
Q 010759 417 VELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSM-HIWSLKEGKI 464 (502)
Q Consensus 417 ~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i-~iw~~~~~~~ 464 (502)
+.+++.. .+..+...|.+++|+| .++++++.++.. .||.+. ++.
T Consensus 289 ~~~g~~~-~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~-g~~ 333 (347)
T 2gop_A 289 IWDGEIK-PIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD-GEE 333 (347)
T ss_dssp EESSSEE-EEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES-SSE
T ss_pred EcCCceE-EEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC-CcE
Confidence 8766654 4444577899999999 677777777654 777766 553
No 177
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.77 E-value=2.5e-16 Score=152.23 Aligned_cols=255 Identities=11% Similarity=0.125 Sum_probs=174.9
Q ss_pred CeEEEEECCCCCEEEEEE---------CCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---C--eEEE
Q 010759 215 DVTTLDWNGEGTLLATGS---------YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---K--TAIV 280 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~---------~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~--~v~i 280 (502)
.+...++ ||++++... .++.|.+|+..+.....+ ..+..++|+|+|++|+.++.+ + .|.+
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~ 89 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI----ENATMPRISPDGKKIAFMRANEEKKVSEIWV 89 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE----ESCEEEEECTTSSEEEEEEEETTTTEEEEEE
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc----ccCCCeEECCCCCEEEEEEeccCCCcceEEE
Confidence 4667777 888777542 356889999876554444 567889999999998877654 3 4788
Q ss_pred EeccCcceeEEeeecccCeEEEecCCC-ceEEEEcC---------------------------CCeEEEEEcCCCcceee
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSST---------------------------DNMIYVCKIGENRPIKT 332 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---------------------------d~~i~~~~~~~~~~~~~ 332 (502)
||+.+++......... +..+.|.++ ..++.++. ...|++|++..+..+..
T Consensus 90 ~~~~~g~~~~l~~~~~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~ 167 (347)
T 2gop_A 90 ADLETLSSKKILEAKN--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEE 167 (347)
T ss_dssp EETTTTEEEEEEEESE--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEE
T ss_pred EECCCCceEEEEcCCC--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEee
Confidence 8888877665544433 777888644 44554432 25688999987766344
Q ss_pred ecCCCcceeEEEEcCCCCEEEEEeCCC-------cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 333 FAGHQGEVNCVKWDPTGSLLASCSDDV-------TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 333 ~~~h~~~v~~v~~~p~~~~l~sgs~dg-------~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
+.. . .+..++|+|+| +++++..++ ...||.+.++. ...+..+ ..+..+ +|+|. .|+.
T Consensus 168 l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~--spdg~---------~l~~ 231 (347)
T 2gop_A 168 FEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAV--DSDGE---------RILL 231 (347)
T ss_dssp EEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEE--EECSS---------CEEE
T ss_pred ecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCc-eEEeccC-cceeeE--CCCCC---------EEEE
Confidence 444 3 78899999999 888776542 34555444443 3333333 444444 88886 3444
Q ss_pred EeCC--------CeEEEEeCCCCeEEEEeeCCCCCEEE-EEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEE
Q 010759 406 ASFD--------STVKLWDVELGKLLYSLNGHREPVYS-LAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFE 476 (502)
Q Consensus 406 gs~d--------g~i~iwd~~~~~~~~~~~~h~~~v~~-l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~ 476 (502)
++.+ ..|.+|| +++......+|...+.. +.|+ +| ++++++.++.++|| +.+++......+.+.|.+
T Consensus 232 ~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~ 306 (347)
T 2gop_A 232 YGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMG 306 (347)
T ss_dssp EECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEE
T ss_pred EEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEe
Confidence 4432 4788888 56654444556778886 9999 98 99999999999999 877776655566667899
Q ss_pred EEECCCCCEEEEEECCCeE-EEEEe
Q 010759 477 VCWNKEGDKIAACFANHTV-CVLDF 500 (502)
Q Consensus 477 ~~ws~~g~~la~~~~~~~v-~v~~~ 500 (502)
++|+| ..+++++.++.. .||.+
T Consensus 307 ~~~s~--~~~~~~~~~~~~~~l~~~ 329 (347)
T 2gop_A 307 FDVDE--IVVYLKETATRLRELFTW 329 (347)
T ss_dssp EEESS--SEEEEEECSSSCCEEEEE
T ss_pred eeeeC--cEEEEEcCCCChHHheEe
Confidence 99999 677777666654 66654
No 178
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.75 E-value=7.5e-16 Score=145.52 Aligned_cols=233 Identities=13% Similarity=0.115 Sum_probs=170.0
Q ss_pred CCeEEEEECCCCC-EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 214 KDVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 214 ~~V~~l~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
....+++|+|+|+ +++++..++.|..|+..+. ...+..+...+.+++++|+|+.+++...++.|.+||+.+++.....
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~ 106 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIA 106 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEE
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEe
Confidence 4467899999998 7888888999999999877 6667777788999999999998888877899999998777643211
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE----e------------
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC----S------------ 356 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg----s------------ 356 (502)
.... . .....++.++++|+|+++++. +
T Consensus 107 ~~~~------------------------------~-------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~ 149 (296)
T 3e5z_A 107 DSFE------------------------------G-------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEME 149 (296)
T ss_dssp CEET------------------------------T-------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCC
T ss_pred eccC------------------------------C-------CCCCCCCCEEECCCCCEEEECCcccccccccccccccc
Confidence 1000 0 011245678899999988873 3
Q ss_pred -CCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-CCeE---EEEeeCCCC
Q 010759 357 -DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-LGKL---LYSLNGHRE 431 (502)
Q Consensus 357 -~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~~~~---~~~~~~h~~ 431 (502)
..+.|..++.. ++ +..+..+......++|+|++. +|++.+.++.|++|++. .++. ...+..+..
T Consensus 150 ~~~~~l~~~~~~-g~-~~~~~~~~~~~~gi~~s~dg~---------~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 218 (296)
T 3e5z_A 150 LPGRWVFRLAPD-GT-LSAPIRDRVKPNGLAFLPSGN---------LLVSDTGDNATHRYCLNARGETEYQGVHFTVEPG 218 (296)
T ss_dssp SSSCEEEEECTT-SC-EEEEECCCSSEEEEEECTTSC---------EEEEETTTTEEEEEEECSSSCEEEEEEEECCSSS
T ss_pred CCCcEEEEECCC-CC-EEEeecCCCCCccEEECCCCC---------EEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCC
Confidence 12345555544 33 333444556678999999986 44778888999999986 5554 233333455
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEE-CCCCCEEEEEECCCeEEEEE
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCW-NKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~w-s~~g~~la~~~~~~~v~v~~ 499 (502)
.+.+|+++++|+++++. ++.|.+|+.. ++.+..+.....+.+++| +|+++.|.+++.++ +..++
T Consensus 219 ~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L~v~t~~~-l~~~~ 283 (296)
T 3e5z_A 219 KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTLYMTVSTE-FWSIE 283 (296)
T ss_dssp CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEEEEEETTE-EEEEE
T ss_pred CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEEEEEcCCe-EEEEE
Confidence 67889999999977766 7899999986 777777765444889999 68999999998764 44443
No 179
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.75 E-value=8.5e-14 Score=131.05 Aligned_cols=279 Identities=8% Similarity=0.041 Sum_probs=197.3
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLA 229 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 229 (502)
+..+...+.+++++|+|+++++...++.|.+|+.. +.. . .... ......+.++++.++|.+++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~---------~-----~~~~--~~~~~~~~~i~~~~~g~l~v 72 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKI---------T-----EYPL--PTPDAKVMCLTISSDGEVWF 72 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCE---------E-----EEEC--SSTTCCEEEEEECTTSCEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCe---------E-----EecC--CcccCceeeEEECCCCCEEE
Confidence 33455679999999999988877778999999875 321 0 0110 11235689999999999888
Q ss_pred EEECCCcEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc
Q 010759 230 TGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV 308 (502)
Q Consensus 230 sg~~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (502)
+...++.|..|+..+.... .+......+.++++.+++..+++...++.|.+||. ++.... +
T Consensus 73 ~~~~~~~i~~~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~-~---------------- 134 (299)
T 2z2n_A 73 TENAANKIGRITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIRE-Y---------------- 134 (299)
T ss_dssp EETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-E----------------
T ss_pred eCCCCCeEEEECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEE-e----------------
Confidence 8777889999998754322 12234557899999999988888878889999987 443221 0
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee-cccCCCcEEEEEE
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-LREHSKEIYTIRW 387 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~~~~~i~~~~~ 387 (502)
....+...+.++++.++|.++++...++.|..||. +++.... +......+..+++
T Consensus 135 -----------------------~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 190 (299)
T 2z2n_A 135 -----------------------ELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITK 190 (299)
T ss_dssp -----------------------ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred -----------------------cCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEE
Confidence 00112235778999999998888777889999998 5554332 2333456788999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE-EeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY-SLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
.+++. +.++...++.|.+||. +++... .+..+...+.+|+++++|+++++...++.|.+|+. ++...
T Consensus 191 ~~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~- 258 (299)
T 2z2n_A 191 GNDDA---------LWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNIIE- 258 (299)
T ss_dssp CTTSS---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEEE-
T ss_pred CCCCC---------EEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC-CCceE-
Confidence 88875 4555556789999999 666433 23445567899999999997777767889999998 55543
Q ss_pred EEe---cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 467 TYT---GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 467 ~~~---~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+. +...+.++++ ++|++.++.. ++.|..++.+
T Consensus 259 ~~~~~~~~~~~~~i~~-~~g~l~v~~~-~~~l~~~~~~ 294 (299)
T 2z2n_A 259 EYPIQIKSAEPHGICF-DGETIWFAME-CDKIGKLTLI 294 (299)
T ss_dssp EEECSSSSCCEEEEEE-CSSCEEEEET-TTEEEEEEEC
T ss_pred EEeCCCCCCccceEEe-cCCCEEEEec-CCcEEEEEcC
Confidence 332 2346899999 8888777655 5678777754
No 180
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.75 E-value=1.4e-15 Score=147.86 Aligned_cols=270 Identities=11% Similarity=0.089 Sum_probs=177.5
Q ss_pred eeccccccceeEEEECCCCCEEEEEe----------CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeE
Q 010759 148 TILEGHTSEVCACAWSPAGSLLASGS----------GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVT 217 (502)
Q Consensus 148 ~~l~~H~~~V~~~~~spd~~~l~sgs----------~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 217 (502)
..+..+..+ .++|||||++|++++ .+++|.+||+.+.+... .+.....+ ........
T Consensus 45 ~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~----------~i~~~~~~-~~~g~~p~ 111 (361)
T 2oiz_A 45 GMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEK----------EISLPPKR-VQGLNYDG 111 (361)
T ss_dssp EEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEE----------EEEECTTB-CCBCCCGG
T ss_pred EEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEE----------EEEcCccc-cccCCCcc
Confidence 344455555 899999999999886 36789999987543211 11100000 00123466
Q ss_pred EEEECCCCCEEEEEEC--CCcEEEEECCCceeEee-cCCCCCEEEEEecCCC-CEEEEecCCCeEEEEeccC-cceeEEe
Q 010759 218 TLDWNGEGTLLATGSY--DGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKG-DYLLTGSCDKTAIVWDVKT-EEWKQQF 292 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~-~~h~~~V~~l~~~~~~-~~l~sgs~D~~v~iwd~~~-~~~~~~~ 292 (502)
.++|+|+|++|+++.. ++.|.+||+........ ..+. ....+.+.|.+ ..+++.+.||++.+|++.. ++.....
T Consensus 112 ~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~-~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~ 190 (361)
T 2oiz_A 112 LFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAA-GCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQS 190 (361)
T ss_dssp GEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGT-TEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEE
T ss_pred eEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCC-CcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeec
Confidence 7899999999998874 58999999876533322 2222 23445677766 6788899999999999865 4443211
Q ss_pred ------eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc--eeeecC------CC----cceeEEEEcCCCCEEEE
Q 010759 293 ------EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFAG------HQ----GEVNCVKWDPTGSLLAS 354 (502)
Q Consensus 293 ------~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~~------h~----~~v~~v~~~p~~~~l~s 354 (502)
.....++..........++..+.++.++++++..... +..+.- +. ....-++|+|+++.++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv 270 (361)
T 2oiz_A 191 RSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYV 270 (361)
T ss_dssp ECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEE
T ss_pred cccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEE
Confidence 1111111100001223444455678899999865432 111110 00 11112789999887665
Q ss_pred EeC-----------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC--e
Q 010759 355 CSD-----------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG--K 421 (502)
Q Consensus 355 gs~-----------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~--~ 421 (502)
+.. .+.|.+||+.+++.+..+..+. ...++|+|+|. +|++++. ++|.+||..++ +
T Consensus 271 ~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~---------~l~v~n~-~~v~v~D~~t~~l~ 338 (361)
T 2oiz_A 271 FMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRN---------LMLTLDG-GNVNVYDISQPEPK 338 (361)
T ss_dssp EEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTT---------EEEEECS-SCEEEEECSSSSCE
T ss_pred EEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCC---------EEEEeCC-CeEEEEECCCCcce
Confidence 532 3489999999999998887766 89999999986 5666665 99999999999 9
Q ss_pred EEEEeeCCCCCEEEEEECCCCC
Q 010759 422 LLYSLNGHREPVYSLAFSPTGE 443 (502)
Q Consensus 422 ~~~~~~~h~~~v~~l~~spdg~ 443 (502)
.+.++..+......++|+|+|.
T Consensus 339 ~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 339 LLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEEETTSCSSEEEEEECCCSC
T ss_pred eeEEeccCCCCcEEEEecCCCC
Confidence 9999866777789999999986
No 181
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.74 E-value=2.6e-16 Score=166.03 Aligned_cols=236 Identities=11% Similarity=0.035 Sum_probs=167.9
Q ss_pred CCCCeEEEEECCCCCEEEEE--ECCCcEEEEEC-CCceeEeecCCCCCEE---------EEEec--CCCCE-EEEecC-C
Q 010759 212 KSKDVTTLDWNGEGTLLATG--SYDGQARIWST-NGDLKCTLSKHKGPIF---------SLKWN--KKGDY-LLTGSC-D 275 (502)
Q Consensus 212 ~~~~V~~l~~s~~~~~l~sg--~~dg~i~iw~~-~~~~~~~~~~h~~~V~---------~l~~~--~~~~~-l~sgs~-D 275 (502)
+...|..++|++++.++++. +.++...||.. .+.....+..|...+. ...|+ |+|++ |+.++. +
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~ 101 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGD 101 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTT
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCC
Confidence 46679999999988777777 56888999984 4444556666666655 55565 99988 665443 4
Q ss_pred CeEEEEecc--C-cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC-----CCcceeEEEEcC
Q 010759 276 KTAIVWDVK--T-EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-----HQGEVNCVKWDP 347 (502)
Q Consensus 276 ~~v~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-----h~~~v~~v~~~p 347 (502)
..|.+|++. + +.. ..+.. |...+.+++|+|
T Consensus 102 ~~l~~~~~~~~g~~~~------------------------------------------~~l~~~~~~~~~~~~~~~~~sp 139 (662)
T 3azo_A 102 QRLYAFEPDAPGGAVP------------------------------------------RPLTPVSAVGGGLRWADPVLLP 139 (662)
T ss_dssp CCEEEECTTSTTCCCC------------------------------------------EECSCCCCSTTCEEEEEEEEET
T ss_pred CeEEEEcCCCCCCCCC------------------------------------------EeccCCccCCCCccccCcEECC
Confidence 555555554 1 221 11222 556678899999
Q ss_pred CCCEEEEEeCC----------CcEEEEeCCC------Cceeeecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-
Q 010759 348 TGSLLASCSDD----------VTAKIWNMKQ------DKYVHDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD- 409 (502)
Q Consensus 348 ~~~~l~sgs~d----------g~i~iwd~~~------~~~~~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d- 409 (502)
||+.|++++.+ ..|++||+.+ +.. ..+. .+...+..++|+|+|. .|+.++.+
T Consensus 140 Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~---------~la~~~~~~ 209 (662)
T 3azo_A 140 ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGR---------QAVWLAWDH 209 (662)
T ss_dssp TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSS---------EEEEEEECT
T ss_pred CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCC---------EEEEEECCC
Confidence 99999998877 5899999987 443 3444 5556778899999997 56655544
Q ss_pred -------CeEEEEeCC-CC---eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC--cEEEEeCCCCeeEEEEecCCC---
Q 010759 410 -------STVKLWDVE-LG---KLLYSLNGHREPVYSLAFSPTGEYLASGSLDK--SMHIWSLKEGKIVKTYTGNGG--- 473 (502)
Q Consensus 410 -------g~i~iwd~~-~~---~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg--~i~iw~~~~~~~~~~~~~~~~--- 473 (502)
..|++||+. ++ +......+|...+..++|+|||+++++++.++ .|.+|++.+++......++..
T Consensus 210 ~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~ 289 (662)
T 3azo_A 210 PRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRREEEFAG 289 (662)
T ss_dssp TCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCCSSBSSC
T ss_pred CCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccccccccC
Confidence 479999998 57 44444455678899999999999888888888 566667667765544333221
Q ss_pred ------EEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 474 ------IFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 474 ------i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+..++|+|+|++++++.. +.+.||.+
T Consensus 290 p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~ 321 (662)
T 3azo_A 290 PLWTPGMRWFAPLANGLIAVVHGK-GAAVLGIL 321 (662)
T ss_dssp CCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEE
T ss_pred ccccccCceEeEeCCCEEEEEEEc-CccEEEEE
Confidence 457889999999999988 88888844
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.73 E-value=1.8e-15 Score=145.30 Aligned_cols=265 Identities=11% Similarity=0.060 Sum_probs=179.0
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..|.+++|+|++..+++.+.++.++.|.-. ....+. .+...+.+++|+++|++++++..+
T Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~ 65 (333)
T 2dg1_A 6 QDLPTLFYSGKSNSAVPIISESELQTITAE----------------PWLEIS----KKGLQLEGLNFDRQGQLFLLDVFE 65 (333)
T ss_dssp CCCCBCCSCGGGGCSSCCCCGGGSCEEECE----------------EEEEEE----SSCCCEEEEEECTTSCEEEEETTT
T ss_pred cccceeeecCCccceeEEeecccCcccccc----------------eeEEEe----ccCccccCcEECCCCCEEEEECCC
Confidence 347788899998888888888999999311 011111 123457899999999988888889
Q ss_pred CcEEEEECCCceeEe-ecCCCCCEEEEEecCCCCEEEEecCC----CeEEEEeccCcceeEEee--ecccCeEEEecCCC
Q 010759 235 GQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFE--FHSGPTLDVDWRNN 307 (502)
Q Consensus 235 g~i~iw~~~~~~~~~-~~~h~~~V~~l~~~~~~~~l~sgs~D----~~v~iwd~~~~~~~~~~~--~~~~~~~~~~~~~~ 307 (502)
+.|.+|+..+..... ...+...+.+++|+|+++.+++...+ +.|.+||+.++.....+. .....+..+.+..+
T Consensus 66 ~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~ 145 (333)
T 2dg1_A 66 GNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSK 145 (333)
T ss_dssp CEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTT
T ss_pred CEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCC
Confidence 999999987544433 33566789999999999988877766 789999998877553332 12234566666544
Q ss_pred ceE-EEEcC------CCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCC-Cceeee----
Q 010759 308 VSF-ATSST------DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQ-DKYVHD---- 374 (502)
Q Consensus 308 ~~~-~~~~~------d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~-~~~~~~---- 374 (502)
..+ ++... .+.|+.++....+.. .+..+...+.+++|+|+|+.+ ++.+.++.|.+|++.+ +..+..
T Consensus 146 g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~ 224 (333)
T 2dg1_A 146 GGFYFTDFRGYSTNPLGGVYYVSPDFRTVT-PIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGAT 224 (333)
T ss_dssp SCEEEEECCCBTTBCCEEEEEECTTSCCEE-EEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEE
T ss_pred CCEEEEeccccccCCCceEEEEeCCCCEEE-EeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccce
Confidence 444 44332 245666655443332 232333457889999999855 5556678999999864 332211
Q ss_pred ----cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC------CEEEEEECCCCCE
Q 010759 375 ----LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE------PVYSLAFSPTGEY 444 (502)
Q Consensus 375 ----~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~------~v~~l~~spdg~~ 444 (502)
+..+ ..+..++++++|. ++++...++.|.+||. .++.+..+..+.. .+.+++|+|++..
T Consensus 225 ~~~~~~~~-~~~~~i~~d~~G~---------l~v~~~~~~~v~~~d~-~g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~~ 293 (333)
T 2dg1_A 225 IPYYFTGH-EGPDSCCIDSDDN---------LYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQ 293 (333)
T ss_dssp EEEECCSS-SEEEEEEEBTTCC---------EEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCE
T ss_pred EEEecCCC-CCCCceEECCCCC---------EEEEEcCCCEEEEECC-CCCEEEEEEcCCCccccccCcceEEECCCCCE
Confidence 1111 3567889998875 5566667889999998 4666666654432 6899999999877
Q ss_pred EEEEeCC
Q 010759 445 LASGSLD 451 (502)
Q Consensus 445 lasgs~D 451 (502)
|+.++.+
T Consensus 294 L~v~~~~ 300 (333)
T 2dg1_A 294 LIICSND 300 (333)
T ss_dssp EEEEEEC
T ss_pred EEEEeCc
Confidence 7655544
No 183
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=2.8e-15 Score=159.38 Aligned_cols=253 Identities=11% Similarity=0.116 Sum_probs=164.1
Q ss_pred CCeEEEEECCCCCEEEEEECCC-----cEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcce
Q 010759 214 KDVTTLDWNGEGTLLATGSYDG-----QARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEW 288 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg-----~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~ 288 (502)
..+..++|||||++|+.+..++ .|++|++.+............+.+++|+|+|+.|+.++.++. ....
T Consensus 125 ~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~-------~~~~ 197 (710)
T 2xdw_A 125 VALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQ-------DGKS 197 (710)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCC-------SSCC
T ss_pred EEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCc-------cccc
Confidence 3588999999999998776543 899999876544322222223567999999999998887754 0000
Q ss_pred eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc--eeeec--CCCcceeEEEEcCCCCEEEEEeC-----CC
Q 010759 289 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP--IKTFA--GHQGEVNCVKWDPTGSLLASCSD-----DV 359 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~--~~~~~--~h~~~v~~v~~~p~~~~l~sgs~-----dg 359 (502)
.+... .......|++|++.++.. ...+. .|...+..+.|+|||++|+.++. +.
T Consensus 198 -------~~~~~-----------~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~ 259 (710)
T 2xdw_A 198 -------DGTET-----------STNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVN 259 (710)
T ss_dssp -------SSSCC-----------CCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCC
T ss_pred -------ccccc-----------ccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCcc
Confidence 00000 001122355555544431 12222 24556778999999999887765 56
Q ss_pred cEEEEeCCC------Cc-eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCe--EEEEee
Q 010759 360 TAKIWNMKQ------DK-YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGK--LLYSLN 427 (502)
Q Consensus 360 ~i~iwd~~~------~~-~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~--~~~~~~ 427 (502)
.|.+||+.+ +. ....+..+...+.. .|+|+|. .+++.+.. .+.|.+||+.++. ....+.
T Consensus 260 ~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~--------~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~ 330 (710)
T 2xdw_A 260 RLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGT--------VFTFKTNRHSPNYRLINIDFTDPEESKWKVLV 330 (710)
T ss_dssp EEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETT--------EEEEEECTTCTTCEEEEEETTSCCGGGCEEEE
T ss_pred EEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCC--------EEEEEECCCCCCCEEEEEeCCCCCcccceecc
Confidence 899999876 42 34445555554544 4778775 23333333 3479999998764 123444
Q ss_pred CCCC--CEEEEEECCCCCEEEEEeCCCc--EEEEeCCCCeeEEEEec-CCCEEEEEECCCCCEEEEEEC----CCeEEEE
Q 010759 428 GHRE--PVYSLAFSPTGEYLASGSLDKS--MHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGDKIAACFA----NHTVCVL 498 (502)
Q Consensus 428 ~h~~--~v~~l~~spdg~~lasgs~Dg~--i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~~la~~~~----~~~v~v~ 498 (502)
.|.. .|..++|++++.+++++..|+. |.+|++.+|+.+..+.. .+.+..++++|+++.++.... .++|++|
T Consensus 331 ~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 331 PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 4544 6888999988888899998985 56677767877666654 345788999999987775543 3678888
Q ss_pred Ee
Q 010759 499 DF 500 (502)
Q Consensus 499 ~~ 500 (502)
|+
T Consensus 411 d~ 412 (710)
T 2xdw_A 411 DL 412 (710)
T ss_dssp ET
T ss_pred EC
Confidence 86
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.72 E-value=2.8e-15 Score=159.42 Aligned_cols=244 Identities=11% Similarity=0.046 Sum_probs=168.8
Q ss_pred ccccceeEEEECCCCCEEEEEeCCC-----cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 152 GHTSEVCACAWSPAGSLLASGSGDS-----TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 152 ~H~~~V~~~~~spd~~~l~sgs~D~-----~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
+|...+.+++|||||++||.++.++ .|++||+.++... .. .... ..+..++|+|||+
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~-----------~~-~~~~------~~~~~~~wspDg~ 183 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL-----------PD-VLER------VKFSCMAWTHDGK 183 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE-----------EE-EEEE------ECSCCEEECTTSS
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC-----------cc-cccC------cccceEEEEeCCC
Confidence 4666789999999999998776543 8999999876421 00 0100 1256789999999
Q ss_pred EEEEEECCCc----------------EEEEECCCce---eEeec--CCCCCEEEEEecCCCCEEEEecC-----CCeEEE
Q 010759 227 LLATGSYDGQ----------------ARIWSTNGDL---KCTLS--KHKGPIFSLKWNKKGDYLLTGSC-----DKTAIV 280 (502)
Q Consensus 227 ~l~sg~~dg~----------------i~iw~~~~~~---~~~~~--~h~~~V~~l~~~~~~~~l~sgs~-----D~~v~i 280 (502)
.|+.++.++. |++|++.+.. ...+. .|...+.++.|+|+|++|+.++. +..|++
T Consensus 184 ~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 263 (710)
T 2xdw_A 184 GMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWY 263 (710)
T ss_dssp EEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred EEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEE
Confidence 9999988876 9999986533 22222 35566889999999999887765 557777
Q ss_pred EeccC------cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEE
Q 010759 281 WDVKT------EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLAS 354 (502)
Q Consensus 281 wd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 354 (502)
||+.+ +.. ....+..+...+.. .|+|+|..|+.
T Consensus 264 ~d~~~~~~~~~~~~----------------------------------------~~~~l~~~~~~~~~-~~s~dg~~l~~ 302 (710)
T 2xdw_A 264 CDLQQESNGITGIL----------------------------------------KWVKLIDNFEGEYD-YVTNEGTVFTF 302 (710)
T ss_dssp EEGGGSSSSSCSSC----------------------------------------CCEEEECSSSSCEE-EEEEETTEEEE
T ss_pred EECcccccccCCcc----------------------------------------ceEEeeCCCCcEEE-EEeccCCEEEE
Confidence 77764 210 11222233333333 47888887776
Q ss_pred EeCC----CcEEEEeCCCCce--eeecccCCC--cEEEEEEccCCCCCCCCCCcEEEEEEeCCCe--EEEEeCCCCeEEE
Q 010759 355 CSDD----VTAKIWNMKQDKY--VHDLREHSK--EIYTIRWSPTGSGTNNPNQQLILASASFDST--VKLWDVELGKLLY 424 (502)
Q Consensus 355 gs~d----g~i~iwd~~~~~~--~~~~~~~~~--~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~--i~iwd~~~~~~~~ 424 (502)
.+.. +.|.+||+.++.. ...+..+.. .+..+.|++.+. ++++...++. |.+|++.+++.+.
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---------lv~~~~~~g~~~l~~~~~~~g~~~~ 373 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNF---------LVLCYLHDVKNTLQLHDLATGALLK 373 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTE---------EEEEEEETTEEEEEEEETTTCCEEE
T ss_pred EECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCE---------EEEEEEECCEEEEEEEECCCCCEEE
Confidence 6653 3599999887642 234444433 577888886543 6788888885 5667877788878
Q ss_pred EeeCCCCCEEEEEECCCCCEEEE-Ee---CCCcEEEEeCCCCe
Q 010759 425 SLNGHREPVYSLAFSPTGEYLAS-GS---LDKSMHIWSLKEGK 463 (502)
Q Consensus 425 ~~~~h~~~v~~l~~spdg~~las-gs---~Dg~i~iw~~~~~~ 463 (502)
.+..+.+.|..++++|++..|+. .+ ..++|++||+.+++
T Consensus 374 ~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 374 IFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred ecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 88878788999999999976653 23 34789999998876
No 185
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=4.2e-16 Score=153.01 Aligned_cols=247 Identities=11% Similarity=0.014 Sum_probs=168.9
Q ss_pred CceeEeecCCCCCEEE-----EEecCCCCEEEEecC-CC--eEEEEeccCcceeEEeeecccCeEEEecCC-CceEEEEc
Q 010759 244 GDLKCTLSKHKGPIFS-----LKWNKKGDYLLTGSC-DK--TAIVWDVKTEEWKQQFEFHSGPTLDVDWRN-NVSFATSS 314 (502)
Q Consensus 244 ~~~~~~~~~h~~~V~~-----l~~~~~~~~l~sgs~-D~--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 314 (502)
+.....+..|...+.. .+|+|+|++|+.++. ++ .|.+||+.+++..+....+...+....|.. ...++.++
T Consensus 20 g~~~~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~ 99 (388)
T 3pe7_A 20 GAQVTRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVK 99 (388)
T ss_dssp CCEEEECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEE
T ss_pred CcceEEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEe
Confidence 4455566777766666 789999999988877 66 488889999887766655555444555654 45677777
Q ss_pred CCCeEEEEEcCCCcceeeecCCCcceeEEE--EcCCCCEEEEE----------------------eCCCcEEEEeCCCCc
Q 010759 315 TDNMIYVCKIGENRPIKTFAGHQGEVNCVK--WDPTGSLLASC----------------------SDDVTAKIWNMKQDK 370 (502)
Q Consensus 315 ~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~--~~p~~~~l~sg----------------------s~dg~i~iwd~~~~~ 370 (502)
.+..+++|++.+++....+..+.+.+.... ++|++++++.. ..+..|.+||+.+++
T Consensus 100 ~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~ 179 (388)
T 3pe7_A 100 DGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE 179 (388)
T ss_dssp TTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC
T ss_pred CCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc
Confidence 788999999998887766666666554443 48999988743 245789999998886
Q ss_pred eeeecccCCCcEEEEEEcc-CCCCCCCCCCcEEEEEEeC------CCeEEEEeCCCCeEEEEeeCCC--CCEEEEEECCC
Q 010759 371 YVHDLREHSKEIYTIRWSP-TGSGTNNPNQQLILASASF------DSTVKLWDVELGKLLYSLNGHR--EPVYSLAFSPT 441 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp-~g~~~~~~~~~~~l~sgs~------dg~i~iwd~~~~~~~~~~~~h~--~~v~~l~~spd 441 (502)
.. .+..+...+..+.|+| +|. .|+..+. ...|.++|+..+.. ..+..+. ..+..++||||
T Consensus 180 ~~-~l~~~~~~~~~~~~sp~dg~---------~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~~~~~~spd 248 (388)
T 3pe7_A 180 ST-VILQENQWLGHPIYRPYDDS---------TVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESCTHEFWVPD 248 (388)
T ss_dssp EE-EEEEESSCEEEEEEETTEEE---------EEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEEEEEEECTT
T ss_pred eE-EeecCCccccccEECCCCCC---------EEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCcccccceECCC
Confidence 44 3445566789999999 885 4554443 33788888775543 3444444 35888999999
Q ss_pred CCEEEEEeCC-C----cEEEEeCCCCeeEEEEecCC--C----EEEEEECCCCCEEEEE---------ECCCeEEEEEee
Q 010759 442 GEYLASGSLD-K----SMHIWSLKEGKIVKTYTGNG--G----IFEVCWNKEGDKIAAC---------FANHTVCVLDFR 501 (502)
Q Consensus 442 g~~lasgs~D-g----~i~iw~~~~~~~~~~~~~~~--~----i~~~~ws~~g~~la~~---------~~~~~v~v~~~~ 501 (502)
|+.|+..+.+ + .|++||+.+++........+ . ...++|+|||+.|++. ..+..|++||+.
T Consensus 249 g~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~ 328 (388)
T 3pe7_A 249 GSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMK 328 (388)
T ss_dssp SSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETT
T ss_pred CCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEecc
Confidence 9988665432 2 39999999887533322111 0 1123799999988865 345688999863
No 186
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.69 E-value=2.8e-14 Score=134.68 Aligned_cols=259 Identities=14% Similarity=0.100 Sum_probs=166.4
Q ss_pred eeeccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 147 VTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 147 ~~~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
+..+..+.....+++|+|+|+ +++++..++.|.+|+..++ . ..+. .+...+.+++++++|
T Consensus 20 ~~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~--------------~~~~----~~~~~~~~l~~~~dg 80 (296)
T 3e5z_A 20 ARRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-L--------------SPEM----HPSHHQNGHCLNKQG 80 (296)
T ss_dssp CEEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-E--------------EEEE----SSCSSEEEEEECTTC
T ss_pred EEEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-e--------------EEEE----CCCCCcceeeECCCC
Confidence 445556667788999999998 7888888999999997653 1 1111 124568999999999
Q ss_pred CEEEEEECCCcEEEEEC-CCceeEeecCC----CCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 226 TLLATGSYDGQARIWST-NGDLKCTLSKH----KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~-~~~~~~~~~~h----~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+++++...++.|.+|+. .+......... ...+..++++|+|+.+++.+..++...+...... .
T Consensus 81 ~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~----~-------- 148 (296)
T 3e5z_A 81 HLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGE----M-------- 148 (296)
T ss_dssp CEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCC----C--------
T ss_pred cEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCcccccccccccccc----c--------
Confidence 98887777789999998 44433222211 1245678999999888873221110000000000 0
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC-CCce---eeecc
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK-QDKY---VHDLR 376 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~-~~~~---~~~~~ 376 (502)
....+.|+.++.. ..+..+..+....+.++|+|+++.+++.+.++.|.+|++. .+.. ...+.
T Consensus 149 ------------~~~~~~l~~~~~~--g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~ 214 (296)
T 3e5z_A 149 ------------ELPGRWVFRLAPD--GTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHFT 214 (296)
T ss_dssp ------------CSSSCEEEEECTT--SCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEEC
T ss_pred ------------cCCCcEEEEECCC--CCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEee
Confidence 0000111112111 1112223344556889999999988888888999999986 4443 22222
Q ss_pred cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEE-CCCCCEEEEEeCCCcEE
Q 010759 377 EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAF-SPTGEYLASGSLDKSMH 455 (502)
Q Consensus 377 ~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~-spdg~~lasgs~Dg~i~ 455 (502)
.+...+..++++++|. ++++. ++.|.+||.. ++.+..+..+.. +++++| +|+++.|.+++.++ +.
T Consensus 215 ~~~~~p~~i~~d~~G~---------l~v~~--~~~v~~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~-l~ 280 (296)
T 3e5z_A 215 VEPGKTDGLRVDAGGL---------IWASA--GDGVHVLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTE-FW 280 (296)
T ss_dssp CSSSCCCSEEEBTTSC---------EEEEE--TTEEEEECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEETTE-EE
T ss_pred CCCCCCCeEEECCCCC---------EEEEc--CCeEEEECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcCCe-EE
Confidence 2344556788888875 34433 7899999987 788888877766 899999 68999998888764 55
Q ss_pred EEeCCCCee
Q 010759 456 IWSLKEGKI 464 (502)
Q Consensus 456 iw~~~~~~~ 464 (502)
-++..+.++
T Consensus 281 ~~~~~~~~~ 289 (296)
T 3e5z_A 281 SIETNVRGL 289 (296)
T ss_dssp EEECSCCBC
T ss_pred EEEcccccc
Confidence 556666554
No 187
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.69 E-value=1.1e-15 Score=162.14 Aligned_cols=245 Identities=10% Similarity=0.060 Sum_probs=164.4
Q ss_pred cccccceeEEEECCCCCEEE-----EEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 151 EGHTSEVCACAWSPAGSLLA-----SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~~~l~-----sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.+|...+.+++|||||++|| +|+.+.+|++||+.++..... .... ......++|+|||
T Consensus 117 ~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~---------------~~~~--~~~~~~~~wspDg 179 (695)
T 2bkl_A 117 KDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV---------------DVIE--GGKYATPKWTPDS 179 (695)
T ss_dssp SSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS---------------CCBS--CCTTCCCEECTTS
T ss_pred cCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC---------------cccC--cccccceEEecCC
Confidence 36777899999999999988 555668999999988753200 0000 0112578999999
Q ss_pred CEEEEEECCCc-------------EEEEECCCce---eE--eecCCCCCEEEEEecCCCCEEEEecCCC----eEEEEec
Q 010759 226 TLLATGSYDGQ-------------ARIWSTNGDL---KC--TLSKHKGPIFSLKWNKKGDYLLTGSCDK----TAIVWDV 283 (502)
Q Consensus 226 ~~l~sg~~dg~-------------i~iw~~~~~~---~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~----~v~iwd~ 283 (502)
+.|+.++.|.. |++|++.+.. .. ....|...+.++.|+|+|++|+.++.++ .|.+|+.
T Consensus 180 ~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~ 259 (695)
T 2bkl_A 180 KGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRP 259 (695)
T ss_dssp SEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECT
T ss_pred CEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcC
Confidence 99999998876 9999986532 22 2334556789999999999998887776 6777776
Q ss_pred cCcceeEEeeecccCeEEEecCCCceEEEEc---CCCeEEEEEcCCCcc--eeeec-CC-CcceeEEEEcCCCCEEEEEe
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSS---TDNMIYVCKIGENRP--IKTFA-GH-QGEVNCVKWDPTGSLLASCS 356 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~d~~i~~~~~~~~~~--~~~~~-~h-~~~v~~v~~~p~~~~l~sgs 356 (502)
.++++.. +..+........+.++..++.+. .++.|++|++..... ...+. .+ ...+..++|+ ++.++++..
T Consensus 260 ~~~~~~~-l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~ 337 (695)
T 2bkl_A 260 GEKDFRL-LVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYL 337 (695)
T ss_dssp TCSSCEE-EEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEE
T ss_pred CCCceEE-eecCCCceEEEEecCCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEE
Confidence 6665443 33333333333344444334443 357899999876543 23333 33 4467888888 778899999
Q ss_pred CCCcEEEEeCC-CCceeeecccC-CCcEEEEEEccCCCCCCCCCCcEEEEEEe---CCCeEEEEeCCCCeE
Q 010759 357 DDVTAKIWNMK-QDKYVHDLREH-SKEIYTIRWSPTGSGTNNPNQQLILASAS---FDSTVKLWDVELGKL 422 (502)
Q Consensus 357 ~dg~i~iwd~~-~~~~~~~~~~~-~~~i~~~~~sp~g~~~~~~~~~~~l~sgs---~dg~i~iwd~~~~~~ 422 (502)
.|+..+||.+. .++....+..+ ...+..+.++|++. .++++.+ ..++|++||+.+++.
T Consensus 338 ~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~--------~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 338 KDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLD--------DAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp ETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCS--------EEEEEEEETTEEEEEEEEETTTCCE
T ss_pred ECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCC--------EEEEEEcCCCCCCEEEEEECCCCcE
Confidence 99998888654 34455555544 45566677777654 2333333 347899999988764
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.68 E-value=1.8e-14 Score=133.74 Aligned_cols=235 Identities=8% Similarity=-0.028 Sum_probs=162.7
Q ss_pred CEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccCeEEEecCCC-ceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 256 PIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNN-VSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
...+++++++++.++ +.+.++.|.+||..+.............+..+.+..+ ..+++.. ++.|++|+....... .+
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~-~~ 102 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT-VL 102 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-EC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-ee
Confidence 568999999998777 5578899999998665432221122233445555433 3445555 888999987665432 23
Q ss_pred c-CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeE
Q 010759 334 A-GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 412 (502)
Q Consensus 334 ~-~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i 412 (502)
. .....+.+++++|+|+++++...++.|.+|+..+.............+..++++|++. ++++...++.|
T Consensus 103 ~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~---------l~v~~~~~~~i 173 (270)
T 1rwi_B 103 PFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGN---------VYVTDTDNNRV 173 (270)
T ss_dssp CCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCC---------EEEEEGGGTEE
T ss_pred ecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCC---------EEEEECCCCEE
Confidence 2 2335688999999999888888888999998655443322222233567788888774 55666667899
Q ss_pred EEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEEC
Q 010759 413 KLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 413 ~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~ 491 (502)
.+||............+...+.+|+++++|.++++...++.|.+|+........... +...+.+++++++|+.+++...
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~ 253 (270)
T 1rwi_B 174 VKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRG 253 (270)
T ss_dssp EEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGG
T ss_pred EEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECC
Confidence 999998766554433344678999999999888888788999999987654332221 2246899999999998889999
Q ss_pred CCeEEEEEee
Q 010759 492 NHTVCVLDFR 501 (502)
Q Consensus 492 ~~~v~v~~~~ 501 (502)
+++|.+|++.
T Consensus 254 ~~~v~~~~~~ 263 (270)
T 1rwi_B 254 NDRVVKLTSL 263 (270)
T ss_dssp GTEEEEECCC
T ss_pred CCEEEEEcCC
Confidence 9999999864
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.67 E-value=5.4e-14 Score=131.05 Aligned_cols=242 Identities=14% Similarity=0.145 Sum_probs=176.8
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC
Q 010759 165 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG 244 (502)
Q Consensus 165 d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~ 244 (502)
.+++|++++.|+.|.+||..+++.. ..+... ....+.+++++|+|++++ +.++.|..||.++
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~-------------w~~~~~---~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~~G 65 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIV-------------WEYPLE---KGWECNSVAATKAGEILF--SYSKGAKMITRDG 65 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEE-------------EEEECC---TTCCCCEEEECTTSCEEE--ECBSEEEEECTTS
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEE-------------EEeCCC---ccCCCcCeEECCCCCEEE--eCCCCEEEECCCC
Confidence 4688999999999999998777521 111111 113578899999999988 4578899999988
Q ss_pred ceeEeecCC-CCCEEEEEecCCCCEEEEecC-CCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEE
Q 010759 245 DLKCTLSKH-KGPIFSLKWNKKGDYLLTGSC-DKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVC 322 (502)
Q Consensus 245 ~~~~~~~~h-~~~V~~l~~~~~~~~l~sgs~-D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~ 322 (502)
+.+..+..+ ...+.++.+.++|+++++.+. ++.|..+|. +++.+..+...
T Consensus 66 ~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~--------------------------- 117 (276)
T 3no2_A 66 RELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFE--------------------------- 117 (276)
T ss_dssp CEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEEC---------------------------
T ss_pred CEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEecc---------------------------
Confidence 888777765 357889999999999999887 778888875 55544433211
Q ss_pred EcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 323 KIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 323 ~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
.. ..++......+++.++|+++++.+.++.|.+||.. ++.+.++... ...+++...+++. +
T Consensus 118 ---~~-----~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~---------~ 178 (276)
T 3no2_A 118 ---TG-----IERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD---------C 178 (276)
T ss_dssp ---CS-----CSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC---------E
T ss_pred ---CC-----CCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC---------E
Confidence 00 01111234456788999999999999999999988 8888777654 3445666677765 6
Q ss_pred EEEEeCCCeEEEEeCCCCeEEEEeeCCC------CCEEEEEECCCCCEEEEEeC--C------CcEEEEeC-CCCeeEEE
Q 010759 403 LASASFDSTVKLWDVELGKLLYSLNGHR------EPVYSLAFSPTGEYLASGSL--D------KSMHIWSL-KEGKIVKT 467 (502)
Q Consensus 403 l~sgs~dg~i~iwd~~~~~~~~~~~~h~------~~v~~l~~spdg~~lasgs~--D------g~i~iw~~-~~~~~~~~ 467 (502)
+++++.++.|..+|..+|+.++++..+. ..+..++..++|.++++... . +..+++.+ .+|+++..
T Consensus 179 ~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~ 258 (276)
T 3no2_A 179 LVACGDAHCFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQ 258 (276)
T ss_dssp EEECBTTSEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEE
T ss_pred EEEeCCCCeEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEeccCccccccccCCceEEEECCCCCEEEE
Confidence 7777778899999999999999986432 23788999999999888742 1 23456666 57888888
Q ss_pred EecC
Q 010759 468 YTGN 471 (502)
Q Consensus 468 ~~~~ 471 (502)
|...
T Consensus 259 ~~~~ 262 (276)
T 3no2_A 259 LNDK 262 (276)
T ss_dssp ECCT
T ss_pred ecCc
Confidence 8654
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.67 E-value=4.2e-14 Score=135.55 Aligned_cols=280 Identities=11% Similarity=0.038 Sum_probs=189.8
Q ss_pred CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEECCC-ceeEeecC
Q 010759 174 GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWSTNG-DLKCTLSK 252 (502)
Q Consensus 174 ~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~-~~~~~~~~ 252 (502)
.+++|.+||..+++...... ....+ .........+++. +++++++...++.|.+||... ....++.
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~---------~~~n~--~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~- 81 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVF---------YRANG--FKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRIT- 81 (328)
T ss_dssp CCBEEEEEETTTTEEECSHH---------HHHHS--SCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEE-
T ss_pred CCceEEEEECCCCEEhhhhH---------hhhcC--cccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcC-
Confidence 48899999988764221100 00000 0111235667774 355666666689999999874 4445564
Q ss_pred CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeeccc-----CeEEEecCCCceEEEEc-CCCeEEEEEcCC
Q 010759 253 HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSG-----PTLDVDWRNNVSFATSS-TDNMIYVCKIGE 326 (502)
Q Consensus 253 h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~-~d~~i~~~~~~~ 326 (502)
.......+++++++..+++...++.|.+||+.+++....+..... ....+.+..+..+++.. .++.|.+++..+
T Consensus 82 ~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t 161 (328)
T 3dsm_A 82 GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTET 161 (328)
T ss_dssp CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTT
T ss_pred CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCC
Confidence 345678999988885444444899999999999988776664430 22344445555566654 488999999998
Q ss_pred CcceeeecCCCcceeEEEEcCCCCEEEEEeCC----------CcEEEEeCCCCceeeecccC-CCcEEEEEEccCCCCCC
Q 010759 327 NRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD----------VTAKIWNMKQDKYVHDLREH-SKEIYTIRWSPTGSGTN 395 (502)
Q Consensus 327 ~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d----------g~i~iwd~~~~~~~~~~~~~-~~~i~~~~~sp~g~~~~ 395 (502)
.+.+..+... .....++++|+|++++++..+ +.|.+||..+++....+... ......++++|++.
T Consensus 162 ~~~~~~i~~g-~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~--- 237 (328)
T 3dsm_A 162 DKVVDELTIG-IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRD--- 237 (328)
T ss_dssp TEEEEEEECS-SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSC---
T ss_pred CeEEEEEEcC-CCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCC---
Confidence 8877666542 235678999999988877665 78999999988877665432 23678999999875
Q ss_pred CCCCcEEEEEEeCCCeEEEEeCCCCeEEEE--eeCCCCCEEEEEECC-CCCEEEEE----eCCCcEEEEeCCCCeeEEEE
Q 010759 396 NPNQQLILASASFDSTVKLWDVELGKLLYS--LNGHREPVYSLAFSP-TGEYLASG----SLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 396 ~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~sp-dg~~lasg----s~Dg~i~iw~~~~~~~~~~~ 468 (502)
.|..+.. .|.+||..+++.... +.........++++| ++.++++. ..++.|.+|+.. |++++++
T Consensus 238 ------~lyv~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 238 ------TLYWINN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp ------EEEEESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred ------EEEEEcc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 3444333 899999988775321 221235689999999 56666666 678999999998 9988888
Q ss_pred ecCCCEEEEEE
Q 010759 469 TGNGGIFEVCW 479 (502)
Q Consensus 469 ~~~~~i~~~~w 479 (502)
........++|
T Consensus 309 ~~G~~P~~~~~ 319 (328)
T 3dsm_A 309 YVGIIPGAFCW 319 (328)
T ss_dssp EEEESEEEEEE
T ss_pred EeccCcceEEE
Confidence 65444556655
No 191
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.67 E-value=3.1e-15 Score=158.54 Aligned_cols=238 Identities=11% Similarity=-0.003 Sum_probs=157.1
Q ss_pred CCCeEEEEECCCCCEEE-----EEECCCcEEEEECCCceeEeecCCCCCE--EEEEecCCCCEEEEecCCCe--------
Q 010759 213 SKDVTTLDWNGEGTLLA-----TGSYDGQARIWSTNGDLKCTLSKHKGPI--FSLKWNKKGDYLLTGSCDKT-------- 277 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~-----sg~~dg~i~iw~~~~~~~~~~~~h~~~V--~~l~~~~~~~~l~sgs~D~~-------- 277 (502)
...+..++|||||++|+ +|+.+..|++||+.+..... ..+...+ ..++|+|+|+.|+.++.|..
T Consensus 120 ~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 120 TVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSK-VDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp CEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCS-SCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred CEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcC-CcccCcccccceEEecCCCEEEEEEecCCCCCccccC
Confidence 34688999999999998 44445789999987654320 1121222 67899999999999888765
Q ss_pred -----EEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE
Q 010759 278 -----AIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL 352 (502)
Q Consensus 278 -----v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l 352 (502)
|++|++.++.... ..+.....|...+.++.|+|||++|
T Consensus 199 ~~~~~v~~~~l~t~~~~~-------------------------------------~lv~~~~~~~~~~~~~~~SpDG~~l 241 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKD-------------------------------------TVVHERTGDPTTFLQSDLSRDGKYL 241 (695)
T ss_dssp GGGCEEEEEETTSCGGGC-------------------------------------EEEECCCCCTTCEEEEEECTTSCCE
T ss_pred CCCCEEEEEECCCCchhc-------------------------------------eEEEecCCCCEEEEEEEECCCCCEE
Confidence 6666655432100 0111222345567899999999998
Q ss_pred EEEeCCC----cEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe---CCCeEEEEeCCCCeE--E
Q 010759 353 ASCSDDV----TAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS---FDSTVKLWDVELGKL--L 423 (502)
Q Consensus 353 ~sgs~dg----~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs---~dg~i~iwd~~~~~~--~ 423 (502)
+.++.++ .|.+|+..++. ...+..+...+....| +++ . ++++.. .++.|.+||+.++.. .
T Consensus 242 ~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~-~~g--------~-l~~~s~~~~~~~~l~~~d~~~~~~~~~ 310 (695)
T 2bkl_A 242 FVYILRGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHA-WKD--------R-FYVLTDEGAPRQRVFEVDPAKPARASW 310 (695)
T ss_dssp EEEEEETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEE-ETT--------E-EEEEECTTCTTCEEEEEBTTBCSGGGC
T ss_pred EEEEeCCCCceEEEEEcCCCCc-eEEeecCCCceEEEEe-cCC--------c-EEEEECCCCCCCEEEEEeCCCCCccCC
Confidence 8877666 67777665443 3334444445555555 544 2 344444 358899999987652 1
Q ss_pred EEeeCC--CCCEEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEec--CCCEEEEEECCCCCEEEEEECC----Ce
Q 010759 424 YSLNGH--REPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYTG--NGGIFEVCWNKEGDKIAACFAN----HT 494 (502)
Q Consensus 424 ~~~~~h--~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~~----~~ 494 (502)
..+..+ ...|..++|+ ++.+++++..|+..+||.+. +|+.+..+.. .+.+..++|+|+|+.|+....+ ++
T Consensus 311 ~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~ 389 (695)
T 2bkl_A 311 KEIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQ 389 (695)
T ss_dssp EEEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEE
T ss_pred eEEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCE
Confidence 233333 4568889998 67888999999998888665 4555555543 3457788999999888755443 67
Q ss_pred EEEEEe
Q 010759 495 VCVLDF 500 (502)
Q Consensus 495 v~v~~~ 500 (502)
|++||+
T Consensus 390 v~~~d~ 395 (695)
T 2bkl_A 390 IYKTSV 395 (695)
T ss_dssp EEEEET
T ss_pred EEEEEC
Confidence 888885
No 192
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.67 E-value=2.8e-14 Score=132.48 Aligned_cols=240 Identities=8% Similarity=-0.022 Sum_probs=166.8
Q ss_pred CeEEEEECCCCCEEE-EEECCCcEEEEECCCceeEee-cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 215 DVTTLDWNGEGTLLA-TGSYDGQARIWSTNGDLKCTL-SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~-sg~~dg~i~iw~~~~~~~~~~-~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
...+++++++|++++ +.+.++.|.+|+..+.....+ ..+...+.++++.++++.+++.. ++.|.+||..+.......
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~~~ 103 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTVLP 103 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEECC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEeeee
Confidence 578899999999777 547789999998765433322 22334678899999998666666 889999998765433221
Q ss_pred eecccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 293 EFHSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 293 ~~~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
......+..+.+. +...+++...++.|++++................+.+++++|+|+++++...++.|.+|+......
T Consensus 104 ~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 104 FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 1122345566664 334566666778898887655443322223334678899999999888887888999999887655
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
..........+..++++++|. ++++...++.|.+|+............+...+.+++++|+|+++++.+.+
T Consensus 184 ~~~~~~~~~~p~~i~~d~~g~---------l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~ 254 (270)
T 1rwi_B 184 VVLPFTDITAPWGIAVDEAGT---------VYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTVYVADRGN 254 (270)
T ss_dssp EECCCSSCCSEEEEEECTTCC---------EEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCEEEEEGGG
T ss_pred EeecccCCCCceEEEECCCCC---------EEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCCEEEEECCC
Confidence 443333336688999998874 55666678899999987654433222334568999999999988999999
Q ss_pred CcEEEEeCCCCee
Q 010759 452 KSMHIWSLKEGKI 464 (502)
Q Consensus 452 g~i~iw~~~~~~~ 464 (502)
++|++|++...+.
T Consensus 255 ~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 255 DRVVKLTSLEHHH 267 (270)
T ss_dssp TEEEEECCCGGGS
T ss_pred CEEEEEcCCCccc
Confidence 9999999876543
No 193
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.66 E-value=3.7e-14 Score=132.16 Aligned_cols=213 Identities=18% Similarity=0.141 Sum_probs=162.9
Q ss_pred CCCCEEEEEECCCcEEEEEC-CCceeEeecCCC-CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 223 GEGTLLATGSYDGQARIWST-NGDLKCTLSKHK-GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~-~~~~~~~~~~h~-~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
..+++|++++.++.|.+||. .++....+..+. ..+.++.+.|+|+.|+ +.++.|..||. +++.+..+..
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~------ 73 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA------ 73 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC------
T ss_pred CCCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC------
Confidence 34688999999999999998 778888887765 4678999999999888 34788999998 6764433321
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEEEEeCCCCceeeeccc--
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAKIWNMKQDKYVHDLRE-- 377 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~iwd~~~~~~~~~~~~-- 377 (502)
++...+.++.+.|+|+++++.+. ++.|..+|. .++.+..+..
T Consensus 74 ----------------------------------~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~ 118 (276)
T 3no2_A 74 ----------------------------------PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFET 118 (276)
T ss_dssp ----------------------------------CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECC
T ss_pred ----------------------------------CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccC
Confidence 01124567888999999998887 777877775 5666554431
Q ss_pred ----CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 378 ----HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 378 ----~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
+......+++.++|. ++++.+.++.|..||.. |+.++++... ..+.++.+.++|.+|++++.+++
T Consensus 119 ~~~~~~~~~~~v~~~~~G~---------~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~ 187 (276)
T 3no2_A 119 GIERPHAQFRQINKNKKGN---------YLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHC 187 (276)
T ss_dssp SCSSGGGSCSCCEECTTSC---------EEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSE
T ss_pred CCCcccccccCceECCCCC---------EEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCe
Confidence 112233445556664 67888899999999998 9999998865 44567888999999999999999
Q ss_pred EEEEeCCCCeeEEEEecCC-------CEEEEEECCCCCEEEEEE
Q 010759 454 MHIWSLKEGKIVKTYTGNG-------GIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 454 i~iw~~~~~~~~~~~~~~~-------~i~~~~ws~~g~~la~~~ 490 (502)
|..||..+|+++..+.... .+.+++..++|+.+++.+
T Consensus 188 v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~i~v~~~ 231 (276)
T 3no2_A 188 FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGGLYICNW 231 (276)
T ss_dssp EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSCEEEEEE
T ss_pred EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCCEEEEec
Confidence 9999999999999886321 267889999999998886
No 194
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.64 E-value=3.7e-12 Score=119.75 Aligned_cols=272 Identities=9% Similarity=0.056 Sum_probs=189.6
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
...+.++++.++|+++++...++.|.+|+..+.... .+..+...+.++++.++++.+++...++.|..||.. ++.. .
T Consensus 19 ~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~-~ 96 (300)
T 2qc5_A 19 DSGPYGITSSEDGKVWFTQHKANKISSLDQSGRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFT-E 96 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEE-E
T ss_pred CCCcceeeECCCCCEEEEcCCCCeEEEECCCCceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeE-E
Confidence 346889999999998888777899999998744332 223344678999999999988888778999999987 5543 2
Q ss_pred eee--cccCeEEEecC-CCceEEEEcCCCeEEEEEcCCCccee-eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 292 FEF--HSGPTLDVDWR-NNVSFATSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 292 ~~~--~~~~~~~~~~~-~~~~~~~~~~d~~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
+.. ....+..+.+. +...+++...++.|+.++.. +.... .+......+.++++.++|+++++...++.|..|+.
T Consensus 97 ~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~- 174 (300)
T 2qc5_A 97 YPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN- 174 (300)
T ss_dssp EECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-
T ss_pred ecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-
Confidence 322 22345556554 34455666667888888876 33321 22334457889999999998777777889999998
Q ss_pred CCceee-ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE-EeeCCCCCEEEEEECCCCCEE
Q 010759 368 QDKYVH-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY-SLNGHREPVYSLAFSPTGEYL 445 (502)
Q Consensus 368 ~~~~~~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~h~~~v~~l~~spdg~~l 445 (502)
++.... .+......+..+++.+++. +.++....+.|.+||. +++... .+..+...+.+|+++++|++.
T Consensus 175 ~g~~~~~~~~~~~~~~~~i~~d~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~ 244 (300)
T 2qc5_A 175 TGKLEEYPLPTNAAAPVGITSGNDGA---------LWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIW 244 (300)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSS---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEE
T ss_pred CCcEEEeeCCCCCCCcceEEECCCCC---------EEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEE
Confidence 444432 1223345678899988774 4455555678999998 455433 344455678999999999977
Q ss_pred EEEeCCCcEEEEeCCCCeeEEE-Ee-cCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 446 ASGSLDKSMHIWSLKEGKIVKT-YT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 446 asgs~Dg~i~iw~~~~~~~~~~-~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++...++.|..|+. ++..... .. ....+.+++++++|+..++.. + .|..+|.+
T Consensus 245 v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 245 FTEWGANQIGRITN-DNTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp EEETTTTEEEEECT-TSCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred EeccCCCeEEEECC-CCcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 77777899999998 4554322 12 234578999999998666655 5 88888764
No 195
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.64 E-value=2.7e-13 Score=128.74 Aligned_cols=239 Identities=9% Similarity=0.104 Sum_probs=163.9
Q ss_pred CCeEEEEECCCCCEEEE-------EECCCcEEEEECCCceeEeecC-----CCCCEEEEEecCC-CCEEEEecCCCeEEE
Q 010759 214 KDVTTLDWNGEGTLLAT-------GSYDGQARIWSTNGDLKCTLSK-----HKGPIFSLKWNKK-GDYLLTGSCDKTAIV 280 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~s-------g~~dg~i~iw~~~~~~~~~~~~-----h~~~V~~l~~~~~-~~~l~sgs~D~~v~i 280 (502)
....+++|+++|.++++ +..++.|.+|+........+.. +...+.+++++++ ++.+++.. ...|.+
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~ 96 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLV 96 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTEEEE
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCCEEE
Confidence 34678999999988888 6778999999965443333332 5567899999999 65455444 447888
Q ss_pred EeccCcceeEE-eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC-
Q 010759 281 WDVKTEEWKQQ-FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD- 358 (502)
Q Consensus 281 wd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d- 358 (502)
||.. ++.... .... . ......+.+++++++|+++++...+
T Consensus 97 ~d~~-g~~~~~~~~~~------------------------------~-------~~~~~~~~~i~~d~~g~l~v~~~~~~ 138 (314)
T 1pjx_A 97 VQTD-GTFEEIAKKDS------------------------------E-------GRRMQGCNDCAFDYEGNLWITAPAGE 138 (314)
T ss_dssp EETT-SCEEECCSBCT------------------------------T-------SCBCBCCCEEEECTTSCEEEEECBCB
T ss_pred EeCC-CCEEEEEeccC------------------------------C-------CccccCCcCEEECCCCCEEEEecCcc
Confidence 9887 543211 0000 0 0012346789999999888777655
Q ss_pred --------------CcEEEEeCCCCceeeecccCCCcEEEEEEc----cCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-C
Q 010759 359 --------------VTAKIWNMKQDKYVHDLREHSKEIYTIRWS----PTGSGTNNPNQQLILASASFDSTVKLWDVE-L 419 (502)
Q Consensus 359 --------------g~i~iwd~~~~~~~~~~~~~~~~i~~~~~s----p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-~ 419 (502)
+.|..|+.. ++... +..+......++|+ |++. .++++...++.|.+||+. .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~-~~~~~~~~~~i~~~~~~d~dg~--------~l~v~~~~~~~i~~~~~~~~ 208 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-GQMIQ-VDTAFQFPNGIAVRHMNDGRPY--------QLIVAETPTKKLWSYDIKGP 208 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-SCEEE-EEEEESSEEEEEEEECTTSCEE--------EEEEEETTTTEEEEEEEEET
T ss_pred cccccccccccCCCCeEEEECCC-CCEEE-eccCCCCcceEEEecccCCCCC--------EEEEEECCCCeEEEEECCCC
Confidence 567777765 44332 22233456788898 8763 245555678899999976 4
Q ss_pred Ce-----EEEEeeCCC-CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEECCCCCEEEEE-EC
Q 010759 420 GK-----LLYSLNGHR-EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWNKEGDKIAAC-FA 491 (502)
Q Consensus 420 ~~-----~~~~~~~h~-~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws~~g~~la~~-~~ 491 (502)
++ ....+.++. ..+..++++++|.++++...++.|.+|+..+++.+..+... ..+.+++|+|+|+.|.++ ..
T Consensus 209 g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~ 288 (314)
T 1pjx_A 209 AKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHE 288 (314)
T ss_dssp TEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETT
T ss_pred CccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCC
Confidence 54 233344444 56889999999999998888999999999877776666544 568999999999955544 55
Q ss_pred CCeEEEEEee
Q 010759 492 NHTVCVLDFR 501 (502)
Q Consensus 492 ~~~v~v~~~~ 501 (502)
++.|.+|++.
T Consensus 289 ~~~l~~~~~~ 298 (314)
T 1pjx_A 289 NNAVWKFEWQ 298 (314)
T ss_dssp TTEEEEEECS
T ss_pred CCeEEEEeCC
Confidence 6789888753
No 196
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.63 E-value=4.1e-13 Score=128.66 Aligned_cols=253 Identities=9% Similarity=-0.023 Sum_probs=175.5
Q ss_pred CCCcEEEEECCCceeE-eec------CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec-
Q 010759 233 YDGQARIWSTNGDLKC-TLS------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW- 304 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~-~~~------~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~- 304 (502)
.++.|.++|....... .+. ........+.+. .+..+++...+++|.+||+.+++.+.++.. ......+.+
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~i~~-~~~p~~i~~~ 92 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGRITG-FTSPRYIHFL 92 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEEEEC-CSSEEEEEEE
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEEcCC-CCCCcEEEEe
Confidence 3789999998754332 221 122345777774 344556666789999999999998887743 344556666
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCC-----cceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeeecccC
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ-----GEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHDLREH 378 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~-----~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~~~~~~~~~~~ 378 (502)
.+...+++...++.|.+++..+.+....+.... .....+++ .++.++++.. .++.|.+||..+++.+..+...
T Consensus 93 ~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g 171 (328)
T 3dsm_A 93 SDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIG 171 (328)
T ss_dssp ETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECS
T ss_pred CCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcC
Confidence 445555555578999999998887766554322 14556777 4555555544 4889999999998887766543
Q ss_pred CCcEEEEEEccCCCCCCCCCCcEEEEEEeCC----------CeEEEEeCCCCeEEEEeeCC-CCCEEEEEECCCCCEEEE
Q 010759 379 SKEIYTIRWSPTGSGTNNPNQQLILASASFD----------STVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLAS 447 (502)
Q Consensus 379 ~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d----------g~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~las 447 (502)
.....++++|+|. +++++..+ +.|.+||..+++....+.-. ....+.++|+|++++|..
T Consensus 172 -~~p~~i~~~~dG~---------l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv 241 (328)
T 3dsm_A 172 -IQPTSLVMDKYNK---------MWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYW 241 (328)
T ss_dssp -SCBCCCEECTTSE---------EEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEE
T ss_pred -CCccceEEcCCCC---------EEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEE
Confidence 2345677778774 44444443 78999999999887766532 236799999999998887
Q ss_pred EeCCCcEEEEeCCCCeeEEE--Eec-CCCEEEEEECC-CCCEEEEE----ECCCeEEEEEe
Q 010759 448 GSLDKSMHIWSLKEGKIVKT--YTG-NGGIFEVCWNK-EGDKIAAC----FANHTVCVLDF 500 (502)
Q Consensus 448 gs~Dg~i~iw~~~~~~~~~~--~~~-~~~i~~~~ws~-~g~~la~~----~~~~~v~v~~~ 500 (502)
+.. .|.+||+.++++... +.. .....+++++| +|...++. ..+++|.+||.
T Consensus 242 ~~~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~ 300 (328)
T 3dsm_A 242 INN--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSP 300 (328)
T ss_dssp ESS--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECT
T ss_pred Ecc--EEEEEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECC
Confidence 655 899999998876422 222 24588999999 56666666 67889999975
No 197
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.62 E-value=1.3e-12 Score=133.70 Aligned_cols=267 Identities=13% Similarity=0.118 Sum_probs=189.5
Q ss_pred CCCCEEEEEECCCcEEEEECCCc-eeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEecc--CcceeEEeeecccCe
Q 010759 223 GEGTLLATGSYDGQARIWSTNGD-LKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVK--TEEWKQQFEFHSGPT 299 (502)
Q Consensus 223 ~~~~~l~sg~~dg~i~iw~~~~~-~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~--~~~~~~~~~~~~~~~ 299 (502)
+.+.++++...++.|.++|.... ...++.. ...+..+.|+|+|+++++++.|+.|.+||+. +.+.+..+..... .
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~-P 242 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSE-A 242 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSE-E
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCC-C
Confidence 34567777888999999998754 4445543 3456799999999999999999999999996 7777766654333 3
Q ss_pred EEEecC-----CC-ceEEEEcCCCeEEEEEcCCCcceeeecC----------CCc-ceeEEEEcCCCCE-EEEEeCCCcE
Q 010759 300 LDVDWR-----NN-VSFATSSTDNMIYVCKIGENRPIKTFAG----------HQG-EVNCVKWDPTGSL-LASCSDDVTA 361 (502)
Q Consensus 300 ~~~~~~-----~~-~~~~~~~~d~~i~~~~~~~~~~~~~~~~----------h~~-~v~~v~~~p~~~~-l~sgs~dg~i 361 (502)
..+.+. +. ..+++...++.+.++|..+.+++..+.- |.. .+..+..++++.. +++...+|.|
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred ceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 455554 33 4455667789999999988888776542 112 5778888888654 5556677999
Q ss_pred EEEeCCCCcee--eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-----CCCCEE
Q 010759 362 KIWNMKQDKYV--HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-----HREPVY 434 (502)
Q Consensus 362 ~iwd~~~~~~~--~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-----h~~~v~ 434 (502)
.++|....+.+ ..+ ........+.|+|++. +++++...++.|.++|+.+++.+..+.- |.+.-.
T Consensus 323 ~~vd~~~~~~~~v~~i-~~~~~~~d~~~~pdgr--------~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~ 393 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEI-SAERFLHDGGLDGSHR--------YFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGA 393 (567)
T ss_dssp EEEETTCSSEEEEEEE-ECCSSEEEEEECTTSC--------EEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCE
T ss_pred EEEecCCCccceeeee-eccccccCceECCCCC--------EEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccce
Confidence 99998765322 122 2334567788999886 4556666788999999999998776643 322121
Q ss_pred EEEECCC-CCEEEEEe-CCCcEEEEeCCC-------CeeEEEEecCC-CEEEEEECCCCCEEEEEEC-------CCeEEE
Q 010759 435 SLAFSPT-GEYLASGS-LDKSMHIWSLKE-------GKIVKTYTGNG-GIFEVCWNKEGDKIAACFA-------NHTVCV 497 (502)
Q Consensus 435 ~l~~spd-g~~lasgs-~Dg~i~iw~~~~-------~~~~~~~~~~~-~i~~~~ws~~g~~la~~~~-------~~~v~v 497 (502)
.+ ++|+ +.+.+++. .++.|.+++..+ .+.++++...+ +-..+..+|++++|.+... ..+|.|
T Consensus 394 ~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v 472 (567)
T 1qks_A 394 NF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAV 472 (567)
T ss_dssp EE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEE
T ss_pred ee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEE
Confidence 22 6887 45555554 468999999987 67888887643 3356788999999888763 358999
Q ss_pred EEee
Q 010759 498 LDFR 501 (502)
Q Consensus 498 ~~~~ 501 (502)
||+.
T Consensus 473 ~d~~ 476 (567)
T 1qks_A 473 FDIK 476 (567)
T ss_dssp EEGG
T ss_pred EECC
Confidence 9864
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.61 E-value=9.2e-12 Score=117.03 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=188.2
Q ss_pred cccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 153 HTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 153 H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
....+.++++.++|+++++...++.|.+|+.. +.. . .. .. ......+.++++.++|.++++..
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~---------~--~~-~~----~~~~~~~~~i~~~~~g~l~v~~~ 80 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRI---------K--EF-EV----PTPDAKVMCLIVSSLGDIWFTEN 80 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE---------E--EE-EC----SSTTCCEEEEEECTTSCEEEEET
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cce---------E--EE-EC----CCCCCcceeEEECCCCCEEEEec
Confidence 44568899999999988888788999999865 321 0 00 01 11235688999999999888777
Q ss_pred CCCcEEEEECCCceeE-eecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE-eeecccCeEEEecCC-Cce
Q 010759 233 YDGQARIWSTNGDLKC-TLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FEFHSGPTLDVDWRN-NVS 309 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~-~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 309 (502)
.++.|..|+..+.... .+......+.++++.+++..+++...++.|..||.. ++.... +......+..+.+.. ...
T Consensus 81 ~~~~v~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 81 GANKIGKLSKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp TTTEEEEECTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSE
T ss_pred CCCeEEEECCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCE
Confidence 7889999998754432 222234678999999999988888778999999987 554422 111233455565543 345
Q ss_pred EEEEcCCCeEEEEEcCCCccee-eecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceee-ecccCCCcEEEEEE
Q 010759 310 FATSSTDNMIYVCKIGENRPIK-TFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVH-DLREHSKEIYTIRW 387 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~-~~~~~~~~i~~~~~ 387 (502)
+++...++.|+.++. .+.... ....+...+.++++.++|.++++....+.|.+|+. ++.... .+......+.++++
T Consensus 160 ~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~ 237 (300)
T 2qc5_A 160 WFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITA 237 (300)
T ss_dssp EEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEE
T ss_pred EEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEE
Confidence 556666788888887 333322 12234456889999999988887777788999998 444332 22334456889999
Q ss_pred ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEE-EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 388 SPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLL-YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 388 sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~-~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+++|. +.++...++.|..||.. ++.. +.+......+.+++++++|.+.++.. . .|..++..
T Consensus 238 d~~g~---------l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~-~-~i~~~~p~ 299 (300)
T 2qc5_A 238 GKNSE---------IWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDGSVWFALK-C-KIGKLNLN 299 (300)
T ss_dssp CSTTC---------EEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTSCEEEECS-S-EEEEEEEC
T ss_pred CCCCC---------EEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCCCEEEEcc-C-ceEEeCCC
Confidence 98875 45555567899999984 5433 33443445688999999998776655 4 67777653
No 199
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.61 E-value=3.8e-13 Score=129.36 Aligned_cols=292 Identities=12% Similarity=0.095 Sum_probs=190.4
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE---
Q 010759 161 AWSPAGSLLASGSG-----DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS--- 232 (502)
Q Consensus 161 ~~spd~~~l~sgs~-----D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~--- 232 (502)
...|+++.++.... ++.|.+.|..+++. +..+... ..+ . ++++|||++++++.
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v-------------~~~I~vG----~~P-~-va~spDG~~lyVan~~~ 99 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRV-------------IGMIDGG----FLP-N-PVVADDGSFIAHASTVF 99 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEE-------------EEEEEEC----SSC-E-EEECTTSSCEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeE-------------EEEEECC----CCC-c-EEECCCCCEEEEEcccc
Confidence 34678887777764 67899999876542 1222111 223 4 99999999888775
Q ss_pred -------CCCcEEEEECCCc-eeEeecCC-------CCCEEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEEeeec
Q 010759 233 -------YDGQARIWSTNGD-LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 233 -------~dg~i~iw~~~~~-~~~~~~~h-------~~~V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~ 295 (502)
.++.|.+||.... ....+.-. ...-..+.|+|+|++++.+.. +++|.++|+.+++.+.++...
T Consensus 100 ~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~ 179 (386)
T 3sjl_D 100 SRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVP 179 (386)
T ss_dssp EETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECC
T ss_pred cccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECC
Confidence 3678999998653 33333211 113457899999999888763 689999999999988877542
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCC-CcceeeecCC----Ccce-eEEEEc-CCCCEEEEEeCCCcEEEEeCCC
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAGH----QGEV-NCVKWD-PTGSLLASCSDDVTAKIWNMKQ 368 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h----~~~v-~~v~~~-p~~~~l~sgs~dg~i~iwd~~~ 368 (502)
.. ..+.......|++.+.||.+.+.++.. ++.+.....+ ...+ ....|. ++|++++ .+.+|++.+.|+.+
T Consensus 180 g~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~ 256 (386)
T 3sjl_D 180 DC--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSS 256 (386)
T ss_dssp SE--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTT
T ss_pred Cc--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCC
Confidence 21 122223445667777888888888876 4432211111 1122 224554 6776554 55689999999876
Q ss_pred Cc--eeeecc--c--------CCCcEEEEEEccCCCCCCCCCCcEEEEEEe--------CCCeEEEEeCCCCeEEEEeeC
Q 010759 369 DK--YVHDLR--E--------HSKEIYTIRWSPTGSGTNNPNQQLILASAS--------FDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 369 ~~--~~~~~~--~--------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs--------~dg~i~iwd~~~~~~~~~~~~ 428 (502)
.. .+..+. . .......++++|++. .+|++... ..+.|.+.|+.+++.+.++.-
T Consensus 257 ~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~-------~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~v 329 (386)
T 3sjl_D 257 GDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALD-------RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEM 329 (386)
T ss_dssp SSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTT-------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEE
T ss_pred CcceeecceeccccccccccccCCCcceeeECCCCC-------eEEEEeccccccccCCCCCEEEEEECCCCeEEEEEEC
Confidence 54 222221 0 011122345556553 33444331 125799999999999888752
Q ss_pred CCCCEEEEEECCCCC-EEEEE-eCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010759 429 HREPVYSLAFSPTGE-YLASG-SLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 482 (502)
Q Consensus 429 h~~~v~~l~~spdg~-~lasg-s~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 482 (502)
...++.|+|+||++ +|+++ ..++.|.++|..++++++++...+..+.|.+++|
T Consensus 330 -g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 330 -GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp -EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred -CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 23688999999996 66665 4589999999999999999987666677777776
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.61 E-value=9.3e-12 Score=116.93 Aligned_cols=234 Identities=8% Similarity=0.040 Sum_probs=170.1
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEe-ecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCT-LSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~-~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
..+.++++.++|+++++...++.|.+|+..+..... +..+...+.++++.+++..+++...++.|..||.. +.. ..+
T Consensus 15 ~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~-~~~ 92 (299)
T 2z2n_A 15 TGPYGITVSDKGKVWITQHKANMISCINLDGKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GII-KEY 92 (299)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-EEE
T ss_pred CCccceEECCCCCEEEEecCCCcEEEEcCCCCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcE-EEE
Confidence 468999999999988877668899999987433221 22345678999999999988888778899999875 221 111
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
.. ......+.++++.|+|.++++...++.|.+||. ++...
T Consensus 93 ------------------------------~~---------~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 93 ------------------------------TL---------PNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp ------------------------------EC---------SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred ------------------------------eC---------CCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 00 012235678999999998888878889999998 44433
Q ss_pred e-ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 373 H-DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 373 ~-~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
. .+......+..+++.+++. +.++...++.|..||. +++.... +......+.+++++++|.++++...
T Consensus 133 ~~~~~~~~~~~~~i~~~~~g~---------l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 202 (299)
T 2z2n_A 133 EYELPNKGSYPSFITLGSDNA---------LWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEII 202 (299)
T ss_dssp EEECSSTTCCEEEEEECTTSC---------EEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETT
T ss_pred EecCCCCCCCCceEEEcCCCC---------EEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccC
Confidence 2 2223345688999988875 5555666789999999 6665432 3344556899999999998887777
Q ss_pred CCcEEEEeCCCCeeEEEE-e-cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 451 DKSMHIWSLKEGKIVKTY-T-GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 451 Dg~i~iw~~~~~~~~~~~-~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
++.|.+|+. +++..... . ....+.+++++++|+..++...++.|.+||.
T Consensus 203 ~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 203 GNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGRLTS 253 (299)
T ss_dssp TTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEEET
T ss_pred CceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCceEEEECC
Confidence 889999999 77654321 1 2356899999999997777767888988874
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.61 E-value=1.8e-13 Score=146.13 Aligned_cols=266 Identities=14% Similarity=0.112 Sum_probs=168.5
Q ss_pred CCCCEEEEEECCCc---EEEEE--CC---CceeEee-------cCCCCCEEEEEecCCCCEEEEecCC-----CeEEEEe
Q 010759 223 GEGTLLATGSYDGQ---ARIWS--TN---GDLKCTL-------SKHKGPIFSLKWNKKGDYLLTGSCD-----KTAIVWD 282 (502)
Q Consensus 223 ~~~~~l~sg~~dg~---i~iw~--~~---~~~~~~~-------~~h~~~V~~l~~~~~~~~l~sgs~D-----~~v~iwd 282 (502)
|+|.+++....++. -.||. .. +.....+ .+|...+.+++|+|+|++|+.++.+ .+|++||
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 67777666554432 45554 32 2222221 2233467899999999998876554 4699999
Q ss_pred ccCcceeEEeeecccCeEEEecCCCceEEEEcCCC--------------eEEEEEcCCCcc--eeeecC--CCcceeEEE
Q 010759 283 VKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDN--------------MIYVCKIGENRP--IKTFAG--HQGEVNCVK 344 (502)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~--------------~i~~~~~~~~~~--~~~~~~--h~~~v~~v~ 344 (502)
+.+++..... .+...+..+.|.++..|+.++.+. .|++|++.+... ...+.. +...+..+.
T Consensus 196 l~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~ 274 (741)
T 1yr2_A 196 VADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGAS 274 (741)
T ss_dssp TTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEE
T ss_pred CCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEE
Confidence 9999875431 111122456776555555555443 388999877652 233333 334588999
Q ss_pred EcCCCCEEEEEeCCC-----cEEEEeCCCC--ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC----CCeEE
Q 010759 345 WDPTGSLLASCSDDV-----TAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF----DSTVK 413 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg-----~i~iwd~~~~--~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~----dg~i~ 413 (502)
|+|||++|+..+.++ .|++||+.++ .....+..+...+.... +|+|. .|+..+. ++.|.
T Consensus 275 ~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~---------~l~~~s~~~~~~~~l~ 344 (741)
T 1yr2_A 275 VSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGD---------QLWFVSGDGAPLKKIV 344 (741)
T ss_dssp ECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETT---------EEEEEECTTCTTCEEE
T ss_pred ECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCC---------EEEEEECCCCCCCEEE
Confidence 999999888777544 7999998776 31344444444444443 37665 2333333 45699
Q ss_pred EEeCCCC--eEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCC-CCeeEEEEe--cCCCEEEEEECCCCCEEEE
Q 010759 414 LWDVELG--KLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLK-EGKIVKTYT--GNGGIFEVCWNKEGDKIAA 488 (502)
Q Consensus 414 iwd~~~~--~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~-~~~~~~~~~--~~~~i~~~~ws~~g~~la~ 488 (502)
+||+.++ .....+..+...+..++|+ ++.++++...|+..+||.+. +++.+..+. ..+.+..++|+|+++.|+.
T Consensus 345 ~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~ 423 (741)
T 1yr2_A 345 RVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYL 423 (741)
T ss_dssp EEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEE
T ss_pred EEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEE
Confidence 9999874 3333344455567788887 56778888999988777654 455555554 3456889999999987775
Q ss_pred EEC----CCeEEEEEe
Q 010759 489 CFA----NHTVCVLDF 500 (502)
Q Consensus 489 ~~~----~~~v~v~~~ 500 (502)
... .++|++||+
T Consensus 424 ~~ss~~~P~~i~~~d~ 439 (741)
T 1yr2_A 424 SFSSFTQPATVLALDP 439 (741)
T ss_dssp EEEETTEEEEEEEEET
T ss_pred EEcCCCCCCEEEEEEC
Confidence 433 367888875
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.61 E-value=1.2e-12 Score=124.31 Aligned_cols=246 Identities=9% Similarity=0.075 Sum_probs=161.3
Q ss_pred ccccccceeEEEECCCCCEEEE-------EeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 150 LEGHTSEVCACAWSPAGSLLAS-------GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~s-------gs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
+.+......+++|+++|.++++ ++.++.|.+|+..++... .+.. .....+...+.+++++
T Consensus 13 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-----------~~~~--~~~~~~~~~~~~i~~~ 79 (314)
T 1pjx_A 13 VTEDIPGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-----------VICK--PEVNGYGGIPAGCQCD 79 (314)
T ss_dssp EECCCTTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-----------EEEC--CEETTEECCEEEEEEC
T ss_pred hhccCCCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-----------EEEe--cccCCCCCCCceEEEe
Confidence 3344456789999999998888 677899999997665321 0000 0001123468899999
Q ss_pred CC-CCEEEEEECCCcEEEEECCCceeEe-ecC----CCCCEEEEEecCCCCEEEEecCC---------------CeEEEE
Q 010759 223 GE-GTLLATGSYDGQARIWSTNGDLKCT-LSK----HKGPIFSLKWNKKGDYLLTGSCD---------------KTAIVW 281 (502)
Q Consensus 223 ~~-~~~l~sg~~dg~i~iw~~~~~~~~~-~~~----h~~~V~~l~~~~~~~~l~sgs~D---------------~~v~iw 281 (502)
++ |+++++. ..+.|.+|+..+..... ... ....+.++++.++|+.+++...+ +.|..|
T Consensus 80 ~~~g~l~v~~-~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~ 158 (314)
T 1pjx_A 80 RDANQLFVAD-MRLGLLVVQTDGTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCF 158 (314)
T ss_dssp SSSSEEEEEE-TTTEEEEEETTSCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEE
T ss_pred cCCCcEEEEE-CCCCEEEEeCCCCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEE
Confidence 99 7655544 44578899987443322 111 12347899999999887776654 344444
Q ss_pred eccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEc----CCCCEE-EEEe
Q 010759 282 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWD----PTGSLL-ASCS 356 (502)
Q Consensus 282 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~----p~~~~l-~sgs 356 (502)
|.. ++.. .+..+......++|+ |+++.+ ++..
T Consensus 159 ~~~-g~~~------------------------------------------~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~ 195 (314)
T 1pjx_A 159 TTD-GQMI------------------------------------------QVDTAFQFPNGIAVRHMNDGRPYQLIVAET 195 (314)
T ss_dssp CTT-SCEE------------------------------------------EEEEEESSEEEEEEEECTTSCEEEEEEEET
T ss_pred CCC-CCEE------------------------------------------EeccCCCCcceEEEecccCCCCCEEEEEEC
Confidence 433 2211 111112235678899 999654 5556
Q ss_pred CCCcEEEEeCC-CCc-----eeeecccCC-CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC
Q 010759 357 DDVTAKIWNMK-QDK-----YVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH 429 (502)
Q Consensus 357 ~dg~i~iwd~~-~~~-----~~~~~~~~~-~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h 429 (502)
.++.|.+|+.. .+. ....+..+. .....++++++|. ++++...++.|.+||..+++.+..+..+
T Consensus 196 ~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~---------l~v~~~~~~~i~~~d~~~g~~~~~~~~~ 266 (314)
T 1pjx_A 196 PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNN---------LLVANWGSSHIEVFGPDGGQPKMRIRCP 266 (314)
T ss_dssp TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCC---------EEEEEETTTEEEEECTTCBSCSEEEECS
T ss_pred CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCC---------EEEEEcCCCEEEEEcCCCCcEeEEEeCC
Confidence 68899999976 343 222333333 5578899999885 5666667889999999877766666666
Q ss_pred CCCEEEEEECCCCCEE-EEEeCCCcEEEEeCCC
Q 010759 430 REPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKE 461 (502)
Q Consensus 430 ~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~ 461 (502)
...+.+++|+|+|++| ++...++.|..|++..
T Consensus 267 ~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 267 FEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp SSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred CCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 6789999999999955 4555678899999864
No 203
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.60 E-value=8.3e-12 Score=121.41 Aligned_cols=275 Identities=9% Similarity=-0.059 Sum_probs=175.8
Q ss_pred ECCCCCEEEEEeC--CC---cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE----
Q 010759 162 WSPAGSLLASGSG--DS---TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS---- 232 (502)
Q Consensus 162 ~spd~~~l~sgs~--D~---~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~---- 232 (502)
..|++++++.... .. +|.+||..+++.. ..+.. ...+ .+++||||++++.+.
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~-------------~~i~~----g~~p--~i~~spDg~~lyv~n~~~~ 88 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSIL-------------GHVNG----GFLP--NPVAAHSGSEFALASTSFS 88 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEE-------------EEecC----CCCC--CeEECCCCCEEEEEecccc
Confidence 4467777666543 22 7899998765421 11111 1223 899999999999886
Q ss_pred ------CCCcEEEEECCC-ceeEeecCC-------CCCEEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEE-eeec
Q 010759 233 ------YDGQARIWSTNG-DLKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQ-FEFH 295 (502)
Q Consensus 233 ------~dg~i~iw~~~~-~~~~~~~~h-------~~~V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~-~~~~ 295 (502)
.++.|.+||... .....+... ...-..+.|+|+|++|+.++. +++|.++| .+++.+.. +...
T Consensus 89 ~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~ 167 (373)
T 2mad_H 89 RIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP 167 (373)
T ss_pred ccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC
Confidence 367899999864 333332211 122358899999999998864 58899999 99988766 5432
Q ss_pred ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec-----CCCcc-eeEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 296 SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-----GHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-----~h~~~-v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
.. + .+.......+++.+.|+.+.+++. .++.+.... ....+ .....+.+++..++..+..+.+.+.|+...
T Consensus 168 ~~-~-~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~ 244 (373)
T 2mad_H 168 TC-Y-HIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAA 244 (373)
T ss_pred ce-E-EEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCC
Confidence 21 2 222233456677778899999988 665542211 11111 223456666655444457789999998654
Q ss_pred c--eeeecccC----------CCcEEEEEEccCCCCCCCCCCcEEEEEEe---------CCCeEEEEeCCCCeEEEEeeC
Q 010759 370 K--YVHDLREH----------SKEIYTIRWSPTGSGTNNPNQQLILASAS---------FDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 370 ~--~~~~~~~~----------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs---------~dg~i~iwd~~~~~~~~~~~~ 428 (502)
. .+..+... ......+.++|++. .+.++.. ..+.|.++|+.+++.+.++..
T Consensus 245 ~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~--------~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~ 316 (373)
T 2mad_H 245 GATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSD--------GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL 316 (373)
T ss_pred cceEeeeeeecCCcccccceecCceEeEEECCCCC--------EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC
Confidence 2 22222111 11123355666553 2333222 246899999999999888863
Q ss_pred CCCCEEEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEE
Q 010759 429 HREPVYSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 429 h~~~v~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~ 468 (502)
.....+++|+|||+ .|+++. .++.|.+||+.+++.++++
T Consensus 317 -g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 317 -GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred -CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 34579999999999 777777 5899999999999998884
No 204
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=1.1e-11 Score=117.00 Aligned_cols=228 Identities=14% Similarity=0.197 Sum_probs=155.4
Q ss_pred eEEEEECCC-CCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGE-GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
--+..|+++ +.++++....+.|..|+..+.....+ .....+.+++++++++++++. +..|.+||+.+++......
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~-~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~- 90 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRV-TMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLAT- 90 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE-ECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEE-
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEE-eCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEe-
Confidence 457789985 55666777789999999876544433 345678999999999955543 5689999988765322110
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC---------CcEEEEe
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD---------VTAKIWN 365 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d---------g~i~iwd 365 (502)
.... .....++.++++|+|+++++.... ....||.
T Consensus 91 -----------------------------~~~~-------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~ 134 (297)
T 3g4e_A 91 -----------------------------VDND-------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYS 134 (297)
T ss_dssp -----------------------------CCTT-------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEE
T ss_pred -----------------------------cCCC-------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEE
Confidence 0000 012346788999999977654321 2345555
Q ss_pred CCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC--CCCeE-----EEEeeCCCCCEEEEEE
Q 010759 366 MKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV--ELGKL-----LYSLNGHREPVYSLAF 438 (502)
Q Consensus 366 ~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~--~~~~~-----~~~~~~h~~~v~~l~~ 438 (502)
+.....+..+.........++|+|++. .++++.+.++.|.+|++ .++.. ...+..+......+++
T Consensus 135 ~d~~g~~~~~~~~~~~pngi~~spdg~--------~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~ 206 (297)
T 3g4e_A 135 LFPDHHVKKYFDQVDISNGLDWSLDHK--------IFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCI 206 (297)
T ss_dssp ECTTSCEEEEEEEESBEEEEEECTTSC--------EEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEE
T ss_pred EECCCCEEEEeeccccccceEEcCCCC--------EEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEE
Confidence 443222222223334567899999885 34566677889999987 45543 2233334456789999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEEEEC-CCCCEEEEEEC
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEVCWN-KEGDKIAACFA 491 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~~ws-~~g~~la~~~~ 491 (502)
+++|++.++....+.|..|+..+|+++..+... ..+.+++|. |+++.|..++.
T Consensus 207 d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~ 261 (297)
T 3g4e_A 207 DAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCA 261 (297)
T ss_dssp BTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEEEB
T ss_pred CCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEEcC
Confidence 999998888888889999999999998888754 569999998 89987766654
No 205
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.54 E-value=8.2e-11 Score=114.39 Aligned_cols=263 Identities=8% Similarity=-0.013 Sum_probs=170.6
Q ss_pred CCCCCEEEEEEC--CC---cEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEec----------CCCeEEEEeccC
Q 010759 222 NGEGTLLATGSY--DG---QARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKT 285 (502)
Q Consensus 222 s~~~~~l~sg~~--dg---~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs----------~D~~v~iwd~~~ 285 (502)
.|+++++++... .. .|.++|... .....+.....+ .++++|++++++.+. .+++|.+||+.+
T Consensus 29 ~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 29 GADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred CCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 467777666653 22 789999764 344455443344 899999999998875 367899999998
Q ss_pred cceeEEeeec-------ccCeEEEecCCC-ceE-EEEcC-CCeEEEEEcCCCcceee-ecCCCcceeEEEEcCCC-CEEE
Q 010759 286 EEWKQQFEFH-------SGPTLDVDWRNN-VSF-ATSST-DNMIYVCKIGENRPIKT-FAGHQGEVNCVKWDPTG-SLLA 353 (502)
Q Consensus 286 ~~~~~~~~~~-------~~~~~~~~~~~~-~~~-~~~~~-d~~i~~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~-~~l~ 353 (502)
.+.+..+... ......+.+..+ ..+ ++... ++.|.++| .+.+.+.. +... .|+.+.|++ ..++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~----~~~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSP----TCYHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCC----ceEEEEeCCCceEE
Confidence 8877766432 111234455433 333 33333 57899999 88877766 4321 134555665 4566
Q ss_pred EEeCCCcEEEEeCCCCceeeecc-----cCCCcE-EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEE
Q 010759 354 SCSDDVTAKIWNMKQDKYVHDLR-----EHSKEI-YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYS 425 (502)
Q Consensus 354 sgs~dg~i~iwd~~~~~~~~~~~-----~~~~~i-~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~ 425 (502)
+.+.||.+.++|. +++.+.... ....++ ....+.+++. . +++. +..+.+.+.|+.... .+..
T Consensus 182 ~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-------~-~~~~-~~~~~v~vid~~~~~~~v~~~ 251 (373)
T 2mad_H 182 LLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSG-------R-IVWP-VYSGKILQADISAAGATNKAP 251 (373)
T ss_pred EEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCC-------E-EEEE-cCCceEEEEeccCCcceEeee
Confidence 7778999999999 776653221 111111 1223444432 1 2333 357889999987543 2222
Q ss_pred eeC----------CCCCEEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-
Q 010759 426 LNG----------HREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD- 484 (502)
Q Consensus 426 ~~~----------h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~- 484 (502)
+.- .......++|+|+++.|..+.. .+.|.++|+.+++++.++...+...+++|+|||+
T Consensus 252 ~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~ 331 (373)
T 2mad_H 252 IDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGP 331 (373)
T ss_pred eeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECCCCCe
Confidence 211 0122445889999987766543 3579999999999999997766789999999999
Q ss_pred EEEEEE-CCCeEEEEEee
Q 010759 485 KIAACF-ANHTVCVLDFR 501 (502)
Q Consensus 485 ~la~~~-~~~~v~v~~~~ 501 (502)
+++++. .++.|.|||..
T Consensus 332 ~l~v~~~~~~~V~ViD~~ 349 (373)
T 2mad_H 332 DLYALSAGTEVLHIYDAG 349 (373)
T ss_pred EEEEEcCCCCeEEEEECC
Confidence 677776 48999999974
No 206
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.52 E-value=1.9e-11 Score=120.62 Aligned_cols=233 Identities=11% Similarity=0.071 Sum_probs=159.9
Q ss_pred CCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc-eEEEEcCCC--eEEEEEcCCCccee
Q 010759 255 GPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTDN--MIYVCKIGENRPIK 331 (502)
Q Consensus 255 ~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~--~i~~~~~~~~~~~~ 331 (502)
.....|+|+++++.+++...++.|++||+.++...........+. +.|.... .++.+..++ .|++++........
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~--ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~ 208 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK--PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPT 208 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB--CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc--eeEecCCCcEEEEecCCCceEEEEEcCCCceeE
Confidence 357899999999988888888999999998877655443322222 4454332 334444433 78888877654433
Q ss_pred ee----cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee----cccCCCcE-E-EEEEccCCCCCCCCCCcE
Q 010759 332 TF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD----LREHSKEI-Y-TIRWSPTGSGTNNPNQQL 401 (502)
Q Consensus 332 ~~----~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~----~~~~~~~i-~-~~~~sp~g~~~~~~~~~~ 401 (502)
.+ ......+.+++++|++..|+.+..++.|+.||..++..... ........ . .++|+|++. .
T Consensus 209 ~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g--------~ 280 (409)
T 3hrp_A 209 RIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDS--------N 280 (409)
T ss_dssp EEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTT--------E
T ss_pred EeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCC--------E
Confidence 33 22445678899999544455577788999999887653221 11122222 2 889998532 2
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEeeCCC---------------CCEEEEEECCCCCEEEEEe-CCCcEEEEeCCCCeeE
Q 010759 402 ILASASFDSTVKLWDVELGKLLYSLNGHR---------------EPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGKIV 465 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~~~~~~~~~h~---------------~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~~~ 465 (502)
++++-..++.|+.|+.... +..+.++. .....|+|+|+|.++++-+ .+++|+.|++.+|.+.
T Consensus 281 lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 281 FYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEEE
T ss_pred EEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEEE
Confidence 5666677889999997643 23333332 3478999999999888888 8999999998888754
Q ss_pred EEEecC----------------CCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 466 KTYTGN----------------GGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 466 ~~~~~~----------------~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
. +.+. ....+++++++|.++++-..+++|+.+.+
T Consensus 359 ~-~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 T-VAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp E-EEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred E-EeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 3 3322 24789999999999999999999988875
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.52 E-value=1.2e-12 Score=139.67 Aligned_cols=238 Identities=13% Similarity=0.076 Sum_probs=156.4
Q ss_pred CeEEEEECCCCCEEEEEECC-----CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCe------------
Q 010759 215 DVTTLDWNGEGTLLATGSYD-----GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKT------------ 277 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~d-----g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~------------ 277 (502)
.+..++|||||++|+.++.+ ..|++||+.+........+...+..++|+|+ +.|+.++.|+.
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57889999999999887654 3699999876544332222222357889999 98888877654
Q ss_pred --EEEEeccCcce--eEEeeecc--cCeEEEecCCCc-eEEEEcC-----CCeEEEEEcCCC--cceeeecCCCcceeEE
Q 010759 278 --AIVWDVKTEEW--KQQFEFHS--GPTLDVDWRNNV-SFATSST-----DNMIYVCKIGEN--RPIKTFAGHQGEVNCV 343 (502)
Q Consensus 278 --v~iwd~~~~~~--~~~~~~~~--~~~~~~~~~~~~-~~~~~~~-----d~~i~~~~~~~~--~~~~~~~~h~~~v~~v 343 (502)
|++|++.++.. ...+.... ..+..+.|..+. .++..+. ...|++|++..+ .+...+..+...+...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~ 322 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDF 322 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEE
T ss_pred CEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEE
Confidence 88999877653 22232222 235667776554 3443332 348999998765 3144555555444444
Q ss_pred EEcCCCCEEEEEeCC----CcEEEEeCCCC--ceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC
Q 010759 344 KWDPTGSLLASCSDD----VTAKIWNMKQD--KYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 417 (502)
Q Consensus 344 ~~~p~~~~l~sgs~d----g~i~iwd~~~~--~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~ 417 (502)
++|+|..|+..+.+ +.|.+||+.++ .....+..+...+..+.|. .+ .++++...|+..+||.+
T Consensus 323 -~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~---------~lv~~~~~dg~~~l~~~ 391 (741)
T 1yr2_A 323 -VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GN---------RLFASYIHDAKSQVLAF 391 (741)
T ss_dssp -EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BT---------EEEEEEEETTEEEEEEE
T ss_pred -EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CC---------EEEEEEEECCEEEEEEE
Confidence 34899988887764 45999998874 3333333344456667775 22 37788888998887755
Q ss_pred C-CCeEEEEeeC-CCCCEEEEEECCCCCEEE-EEe---CCCcEEEEeCCCCee
Q 010759 418 E-LGKLLYSLNG-HREPVYSLAFSPTGEYLA-SGS---LDKSMHIWSLKEGKI 464 (502)
Q Consensus 418 ~-~~~~~~~~~~-h~~~v~~l~~spdg~~la-sgs---~Dg~i~iw~~~~~~~ 464 (502)
. .+..+..+.. +...|..++++|+++.|+ +.+ ..++|++||+.+++.
T Consensus 392 ~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 392 DLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp ETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred eCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 4 4666666654 356789999999987665 222 347899999988763
No 208
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.49 E-value=3.1e-11 Score=119.03 Aligned_cols=233 Identities=11% Similarity=0.054 Sum_probs=160.2
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCC--eEEEEeccCcceeEE
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQ 291 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~--~v~iwd~~~~~~~~~ 291 (502)
.....|+|+++++++++...++.|++|+..+.....+........ ++|+|+++.|+++..++ .|.+|+..++.....
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~ 209 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTR 209 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEE
Confidence 457899999999988888888999999998655444433233334 99999999999888766 899999876554333
Q ss_pred ee---e-cccCeEEEecCC-CceEEEEcCCCeEEEEEcCCCcceee----ecCCCcce--eEEEEcCC-CCEEEEEeCCC
Q 010759 292 FE---F-HSGPTLDVDWRN-NVSFATSSTDNMIYVCKIGENRPIKT----FAGHQGEV--NCVKWDPT-GSLLASCSDDV 359 (502)
Q Consensus 292 ~~---~-~~~~~~~~~~~~-~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~h~~~v--~~v~~~p~-~~~l~sgs~dg 359 (502)
+. . ....+..+.+.. +..+..+..++.|+.|+......... ..++.+.- +.++|+|+ +.++++-..++
T Consensus 210 ~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~ 289 (409)
T 3hrp_A 210 IGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLS 289 (409)
T ss_dssp EEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTT
T ss_pred eeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCC
Confidence 31 1 223344455544 44444466678899999876543222 22332222 38999995 67777777889
Q ss_pred cEEEEeCCCCceeeecccC---------------CCcEEEEEEccCCCCCCCCCCcEEEEEEe-CCCeEEEEeCCCCeEE
Q 010759 360 TAKIWNMKQDKYVHDLREH---------------SKEIYTIRWSPTGSGTNNPNQQLILASAS-FDSTVKLWDVELGKLL 423 (502)
Q Consensus 360 ~i~iwd~~~~~~~~~~~~~---------------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs-~dg~i~iwd~~~~~~~ 423 (502)
.|+.|+.... +..+.++ -.....++++|+|. ++++-+ .++.|+.|++.++...
T Consensus 290 ~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~---------lyvad~~~~~~I~~~~~~~G~v~ 358 (409)
T 3hrp_A 290 SVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN---------FYIVDGFKGYCLRKLDILDGYVS 358 (409)
T ss_dssp EEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC---------EEEEETTTTCEEEEEETTTTEEE
T ss_pred EEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC---------EEEEeCCCCCEEEEEECCCCEEE
Confidence 9999987643 2222222 13467899999875 556666 7899999998777643
Q ss_pred EEeeCC---------------CCCEEEEEECCCCCEEEEEeCCCcEEEEeC
Q 010759 424 YSLNGH---------------REPVYSLAFSPTGEYLASGSLDKSMHIWSL 459 (502)
Q Consensus 424 ~~~~~h---------------~~~v~~l~~spdg~~lasgs~Dg~i~iw~~ 459 (502)
.+.++ -.....|+++|+|.++++-..+++|+.+.+
T Consensus 359 -~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 359 -TVAGQVDVASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp -EEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred -EEeCCCCCCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 44333 245789999999988888888889988765
No 209
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.49 E-value=1.4e-11 Score=120.75 Aligned_cols=290 Identities=10% Similarity=0.057 Sum_probs=184.7
Q ss_pred CCCCEEEEEeC-C----CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE------
Q 010759 164 PAGSLLASGSG-D----STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS------ 232 (502)
Q Consensus 164 pd~~~l~sgs~-D----~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~------ 232 (502)
|++++++.... + +.|.+.|..+.+.. ..+... ..+ .++++|||++++.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv-------------~~I~vG----~~P--gia~SpDgk~lyVan~~~~~~ 142 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRIL-------------GMTDGG----FLP--HPVAAEDGSFFAQASTVFERI 142 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEE-------------EEEEEC----SSC--EEEECTTSSCEEEEEEEEEET
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEE-------------EEEECC----CCC--ceEECCCCCEEEEEecccccc
Confidence 35555555443 2 68999998775421 222111 234 799999999888876
Q ss_pred ----CCCcEEEEECCCc-eeEeecCC-------CCCEEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEEeeecccC
Q 010759 233 ----YDGQARIWSTNGD-LKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP 298 (502)
Q Consensus 233 ----~dg~i~iw~~~~~-~~~~~~~h-------~~~V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~ 298 (502)
.++.|.++|.... ....+.-- ......+.|+|+|++++.+.. +++|.+.|+.+++.+..+.....
T Consensus 143 ~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~- 221 (426)
T 3c75_H 143 ARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDC- 221 (426)
T ss_dssp TEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSE-
T ss_pred ccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCc-
Confidence 3678999998653 33333211 123357899999999998864 58999999999998877764221
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceee----ecCCCcc-eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee-
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT----FAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV- 372 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~----~~~h~~~-v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~- 372 (502)
..+.......|++.+.|+.+.+.+...++.... +.....+ ...+.|.+++..++..+..+.+.+.|+......
T Consensus 222 -~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v 300 (426)
T 3c75_H 222 -YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATF 300 (426)
T ss_dssp -EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEE
T ss_pred -eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEE
Confidence 122222345666677788887777754443321 1111112 124577899888777788899999998654321
Q ss_pred -eeccc----------CCCcEEEEEEccCCCCCCCCCCcEEEEEEe--------CCCeEEEEeCCCCeEEEEeeCCCCCE
Q 010759 373 -HDLRE----------HSKEIYTIRWSPTGSGTNNPNQQLILASAS--------FDSTVKLWDVELGKLLYSLNGHREPV 433 (502)
Q Consensus 373 -~~~~~----------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs--------~dg~i~iwd~~~~~~~~~~~~h~~~v 433 (502)
..+.. .......++++|++. ..|++... ..+.|.++|..+.+.+.++..- ...
T Consensus 301 ~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~-------rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P 372 (426)
T 3c75_H 301 RAPIEALTEAERADDWRPGGWQQTAYHRQSD-------RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEI 372 (426)
T ss_dssp CCCEESSCTTTGGGTEEECSSSCEEEEGGGT-------EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEE
T ss_pred eeeeeeccccccccccccCCceeeEEcCCCC-------EEEEEecccccccccCCCCEEEEEECCCCeEEEEEECC-CCc
Confidence 11100 001112256777764 22333221 1357999999999999887532 247
Q ss_pred EEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010759 434 YSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 482 (502)
Q Consensus 434 ~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 482 (502)
..|+|+|||+ +|+++. .++.|.++|+.++++++++..-+.-..+..+||
T Consensus 373 ~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P~~i~~~~ 423 (426)
T 3c75_H 373 DSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGPQIITTHD 423 (426)
T ss_dssp CEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSCCEEECCC
T ss_pred CeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCCcEEEcCC
Confidence 8899999998 888888 589999999999999998732222222445554
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.48 E-value=8.3e-11 Score=112.41 Aligned_cols=225 Identities=11% Similarity=0.045 Sum_probs=150.8
Q ss_pred eEEEEECCC-CCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGE-GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~-~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
....+|+++ +.++++...++.|..|+..+.....+. ....+.++.|+|+++++++. . ..|.+||+.+++......
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~-~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~~~- 126 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHA-LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLHAE- 126 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEE-CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEEEC-
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE-CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEEee-
Confidence 456789997 456666667899999998765544333 34679999999999876654 3 458899987765321100
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC------CCcEEEEeCCC
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD------DVTAKIWNMKQ 368 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~------dg~i~iwd~~~ 368 (502)
.... .....++.++++|+|+++++... .+.|..++ +
T Consensus 127 -----------------------------~~~~-------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~ 168 (326)
T 2ghs_A 127 -----------------------------LESD-------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K 168 (326)
T ss_dssp -----------------------------SSTT-------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T
T ss_pred -----------------------------CCCC-------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C
Confidence 0000 01235778999999997765542 24455555 3
Q ss_pred CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--CC-e-----EEEEeeCCCCCEEEEEECC
Q 010759 369 DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--LG-K-----LLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 369 ~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--~~-~-----~~~~~~~h~~~v~~l~~sp 440 (502)
++.. .+.........++|+|++. .+.++.+.++.|.+|++. ++ . ....+......+..+++++
T Consensus 169 g~~~-~~~~~~~~~~~i~~s~dg~--------~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~ 239 (326)
T 2ghs_A 169 GKVT-KLFADISIPNSICFSPDGT--------TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDA 239 (326)
T ss_dssp TEEE-EEEEEESSEEEEEECTTSC--------EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECT
T ss_pred CcEE-EeeCCCcccCCeEEcCCCC--------EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECC
Confidence 4332 2222334567899999885 244555667899999985 55 2 2333433445678899999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEecCC-CEEEEEEC-CCCCEEEEEECC
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYTGNG-GIFEVCWN-KEGDKIAACFAN 492 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~-~i~~~~ws-~~g~~la~~~~~ 492 (502)
+|.+.++...++.|.+|+. +++.+..+.... .+.+++|+ |+++.|.+++..
T Consensus 240 ~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~ 292 (326)
T 2ghs_A 240 EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTSAR 292 (326)
T ss_dssp TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEEBC
T ss_pred CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEecC
Confidence 9998888777789999998 677777765443 58999998 898877666544
No 211
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.46 E-value=3.7e-12 Score=123.03 Aligned_cols=183 Identities=12% Similarity=0.067 Sum_probs=134.2
Q ss_pred CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC
Q 010759 256 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG 335 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~ 335 (502)
++..|++++....+++|+.++ +++|++....-. +. ... +. ..+.... .
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~--~~--~~~------------------~~--------~~~~~~~-~ 86 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDH--IT--SDS------------------TP--------LTFKWEK-E 86 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHH--HH--SSS------------------CC--------CCCSEEE-E
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhh--hc--ccc------------------cc--------ccceEEe-e
Confidence 678899999999999999884 555987543200 00 000 00 0111111 2
Q ss_pred CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEE
Q 010759 336 HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLW 415 (502)
Q Consensus 336 h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iw 415 (502)
+.+ |..++| ++.+|+++ .++.|++||+.+.........+...+.++.+.+. -+++++.||.|.+|
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p-----------~~av~~~dG~L~v~ 151 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN-----------TLVILNSVNDLSAL 151 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS-----------EEEEEETTSEEEEE
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC-----------CEEEEECCCCEEEE
Confidence 445 899999 99999998 8899999999877655555666777888776543 16778999999999
Q ss_pred eCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEE------e----cCCCEEEEEECCCC
Q 010759 416 DVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTY------T----GNGGIFEVCWNKEG 483 (502)
Q Consensus 416 d~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~------~----~~~~i~~~~ws~~g 483 (502)
|+..+.... +...|++++|||+| ++.|..||.|++|+...+.+ .+++ . +...|.+++|.+++
T Consensus 152 dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~ 225 (388)
T 1xip_A 152 DLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ 225 (388)
T ss_dssp ETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS
T ss_pred EccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCC
Confidence 999877653 34579999999999 78899999999999887775 5556 2 24569999999999
Q ss_pred CEEEEEEC
Q 010759 484 DKIAACFA 491 (502)
Q Consensus 484 ~~la~~~~ 491 (502)
.++++-..
T Consensus 226 ~flv~y~~ 233 (388)
T 1xip_A 226 DFLAVFGN 233 (388)
T ss_dssp EEEEEEEC
T ss_pred eEEEEEcC
Confidence 98886544
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.44 E-value=4.9e-11 Score=112.87 Aligned_cols=230 Identities=9% Similarity=0.034 Sum_probs=153.9
Q ss_pred CeEEEEECCCCC-EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee
Q 010759 215 DVTTLDWNGEGT-LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 215 ~V~~l~~s~~~~-~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~ 293 (502)
......|+++|+ +++++..++.|..|+..+. ...+..+...+.+++++++|+.+++...++.|.+|+.. +.......
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~ 123 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVG 123 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETTSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEC
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCCCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEe
Confidence 356788999998 6677777899999998655 34455566778999999999977766667889999875 43221100
Q ss_pred ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEEcCCCCEEEE----EeC-----------
Q 010759 294 FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKWDPTGSLLAS----CSD----------- 357 (502)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~l~s----gs~----------- 357 (502)
. ..+ ....++.++++|+|++++| |..
T Consensus 124 ~--------------------------------------~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~ 165 (305)
T 3dr2_A 124 R--------------------------------------YAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPE 165 (305)
T ss_dssp E--------------------------------------ETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCS
T ss_pred c--------------------------------------cCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccc
Confidence 0 000 0123567888999988876 332
Q ss_pred --CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC------CeEEEEeCCCCeEE--EEe-
Q 010759 358 --DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD------STVKLWDVELGKLL--YSL- 426 (502)
Q Consensus 358 --dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d------g~i~iwd~~~~~~~--~~~- 426 (502)
.+.|..||..+++..... .......++|+|++. .|+.+... +.|.+|++..+... ..+
T Consensus 166 ~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~---------~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~ 234 (305)
T 3dr2_A 166 LAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQ---------TLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFA 234 (305)
T ss_dssp SSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSS---------EEEEEECCC---CCCEEEEEEEETTEEEEEEEEE
T ss_pred cCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCC---------EEEEEecCCcCCCCCEEEEEEecCCCccCCeEEE
Confidence 245777777666543322 334567899999986 33344333 78999998755411 111
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.........++++++|++.++. .+ .|.+|+. +++.+..+.....+..++|+|+++.|..++.++ +..++
T Consensus 235 ~~~~~~pdgi~~d~~G~lwv~~-~~-gv~~~~~-~g~~~~~~~~~~~~~~~~f~~d~~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 235 SVPDGLPDGFCVDRGGWLWSSS-GT-GVCVFDS-DGQLLGHIPTPGTASNCTFDQAQQRLFITGGPC-LWMLP 303 (305)
T ss_dssp CCSSSCCCSEEECTTSCEEECC-SS-EEEEECT-TSCEEEEEECSSCCCEEEECTTSCEEEEEETTE-EEEEE
T ss_pred ECCCCCCCeEEECCCCCEEEec-CC-cEEEECC-CCCEEEEEECCCceeEEEEeCCCCEEEEEcCCe-EEEEE
Confidence 1123345678999999965554 44 4999998 577777776655688999999999999888764 44444
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.43 E-value=8.2e-12 Score=120.36 Aligned_cols=257 Identities=9% Similarity=0.038 Sum_probs=167.7
Q ss_pred CCeEEEEECCCCCEEEEEEC--CCcEEEEECCCceeEee-------cCCCCCEEEEEecCCCCEEEEecC-----CCeEE
Q 010759 214 KDVTTLDWNGEGTLLATGSY--DGQARIWSTNGDLKCTL-------SKHKGPIFSLKWNKKGDYLLTGSC-----DKTAI 279 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~--dg~i~iw~~~~~~~~~~-------~~h~~~V~~l~~~~~~~~l~sgs~-----D~~v~ 279 (502)
..+..++++++|+++++... ++.++||.+.......+ ..|-..+.+++++++++.+++-+. +..|.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 35889999999999988642 34355555432222222 234567899999999876665443 68999
Q ss_pred EEeccCcceeEEeeecc------cCeEEEecC--CCceEEEEc---CCCeEEEEEcCCCcceeeecCCCccee-EEEEcC
Q 010759 280 VWDVKTEEWKQQFEFHS------GPTLDVDWR--NNVSFATSS---TDNMIYVCKIGENRPIKTFAGHQGEVN-CVKWDP 347 (502)
Q Consensus 280 iwd~~~~~~~~~~~~~~------~~~~~~~~~--~~~~~~~~~---~d~~i~~~~~~~~~~~~~~~~h~~~v~-~v~~~p 347 (502)
+||+.+++.+..+.... .....+.+. ....+++.. .++.|++|+..+++....+.+|..... ...+.+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~ 176 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVI 176 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeE
Confidence 99999998777765432 123444443 345556665 678999999987776666655532211 144556
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC-eEEEEeCC---CCe--
Q 010759 348 TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-TVKLWDVE---LGK-- 421 (502)
Q Consensus 348 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg-~i~iwd~~---~~~-- 421 (502)
+|..+.+.+.++.++.|. ..+..++|+|++. .|..+...+ .|..++.. .+.
T Consensus 177 ~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~---------~ly~~~~~~~~l~~~~~~~~~~~~~~ 233 (343)
T 2qe8_A 177 DGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENE---------WLYLSPMHSTSMYRIKSADLSNLQLT 233 (343)
T ss_dssp TTEECBEECTTSCEECCC--------------CCEEEEEECTTSC---------EEEEEESSCSEEEEEEHHHHTCTTCC
T ss_pred CCEEEEeccCCCceecee--------------cccceeEeccCCC---------EEEEEeCCCCeEEEEEHHHhcCCCCC
Confidence 787777788888877663 1356799999885 455555554 44444421 110
Q ss_pred ---EE--EEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec--CCCEEEEEECCCCCEEEEEECCC
Q 010759 422 ---LL--YSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG--NGGIFEVCWNKEGDKIAACFANH 493 (502)
Q Consensus 422 ---~~--~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws~~g~~la~~~~~~ 493 (502)
.. ....++......++++++|.++++...++.|.+|+..+|++...... -..+.+++|.++|+++++....+
T Consensus 234 ~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 234 DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTTSCEEEEECCGG
T ss_pred hhhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCCCcEEEEeCccc
Confidence 00 01112334556799999999999999999999999866765433332 23478999999999888776543
No 214
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.42 E-value=9.4e-11 Score=112.75 Aligned_cols=267 Identities=9% Similarity=0.026 Sum_probs=173.4
Q ss_pred EECCCCCEEEEEEC-----CCcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEec----------CCCeEEEEec
Q 010759 220 DWNGEGTLLATGSY-----DGQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDV 283 (502)
Q Consensus 220 ~~s~~~~~l~sg~~-----dg~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs----------~D~~v~iwd~ 283 (502)
...|++..++.... ++.|.+.|... .....+..-..+ . ++++|+|++++.++ .++.|.+||+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 34688888888765 67999999865 444455544455 4 99999999887775 3678999999
Q ss_pred cCcceeEEeeecc-------cCeEEEecCC--CceEEEEc-CCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEE
Q 010759 284 KTEEWKQQFEFHS-------GPTLDVDWRN--NVSFATSS-TDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLA 353 (502)
Q Consensus 284 ~~~~~~~~~~~~~-------~~~~~~~~~~--~~~~~~~~-~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~ 353 (502)
.+.+.+..+.... .....+.+.. ...+++.. .++.|.++|+.+.+.+..+.-.. . ...+....+.++
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g--~-~~~~P~g~~~~~ 193 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD--C-YHIFPTAPDTFF 193 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS--E-EEEEEEETTEEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC--c-ceeecCCCceeE
Confidence 9999888776432 1223344433 33344443 37899999999998887764211 1 122322345677
Q ss_pred EEeCCCcEEEEeCCC-CceeeecccC----CCcEE-EEEEc-cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEE
Q 010759 354 SCSDDVTAKIWNMKQ-DKYVHDLREH----SKEIY-TIRWS-PTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLY 424 (502)
Q Consensus 354 sgs~dg~i~iwd~~~-~~~~~~~~~~----~~~i~-~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~ 424 (502)
+.+.||++.+.++.. ++.......+ ..++. ...|. ++| ..++ .+.+|.|.+.|+.... .+.
T Consensus 194 ~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG--------~~~~--vs~~g~V~v~d~~~~~~~v~~ 263 (386)
T 3sjl_D 194 MHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG--------RLVW--PTYTGKIHQIDLSSGDAKFLP 263 (386)
T ss_dssp EEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT--------EEEE--EBTTSEEEEEECTTSSCEECC
T ss_pred EECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC--------cEEE--EeCCCEEEEEECCCCcceeec
Confidence 888899988888875 4442211100 01111 11222 333 2233 4558999999997654 222
Q ss_pred Eee---------C-CCCCEEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC
Q 010759 425 SLN---------G-HREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD 484 (502)
Q Consensus 425 ~~~---------~-h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~ 484 (502)
.+. + ....+..++++|+++.|..+.. .++|.+.|+.++++++.+.....+++|++++||+
T Consensus 264 ~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D~~ 343 (386)
T 3sjl_D 264 AVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQDEK 343 (386)
T ss_dssp CEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSSSS
T ss_pred ceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCCCC
Confidence 221 0 0122345788999887766542 2579999999999999987666788999999997
Q ss_pred -EEEEE-ECCCeEEEEEee
Q 010759 485 -KIAAC-FANHTVCVLDFR 501 (502)
Q Consensus 485 -~la~~-~~~~~v~v~~~~ 501 (502)
+|.++ ..++.|.|+|..
T Consensus 344 ~~ly~tn~~~~~VsViD~~ 362 (386)
T 3sjl_D 344 PLLYALSTGDKTLYIHDAE 362 (386)
T ss_dssp CEEEEEETTTTEEEEEETT
T ss_pred eEEEEEcCCCCeEEEEECC
Confidence 66654 458999999964
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.41 E-value=1.7e-11 Score=129.61 Aligned_cols=235 Identities=14% Similarity=0.167 Sum_probs=153.2
Q ss_pred CCCCEEEEEecCCCCEEEE-----ecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCC-----------
Q 010759 253 HKGPIFSLKWNKKGDYLLT-----GSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTD----------- 316 (502)
Q Consensus 253 h~~~V~~l~~~~~~~~l~s-----gs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d----------- 316 (502)
|...+.+++|+|+|++|+- |+...+|++||+.+++.+... ........+.|.++..|+.++.+
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWLGNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEETTTEEEEEESSCCC-------C
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEeCCCEEEEEEecCcccccccccC
Confidence 5567888999999998873 333468999999999865431 11111234456644455555444
Q ss_pred --CeEEEEEcCCCcc--eeeec--C-CCcceeEEEEcCCCCEEEEEeC----CCcEEEEeCCCCc-eeeecccCCCcEEE
Q 010759 317 --NMIYVCKIGENRP--IKTFA--G-HQGEVNCVKWDPTGSLLASCSD----DVTAKIWNMKQDK-YVHDLREHSKEIYT 384 (502)
Q Consensus 317 --~~i~~~~~~~~~~--~~~~~--~-h~~~v~~v~~~p~~~~l~sgs~----dg~i~iwd~~~~~-~~~~~~~~~~~i~~ 384 (502)
..|++|++.+... ...+. . |...+..+.|+|||++|+.... ...|++||+.++. ....+..+......
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~ 285 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVS 285 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEE
Confidence 3489999887643 33333 3 4445788999999998754432 3489999987663 33444444444444
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCC---CeEEEEeCCCCeE--EEEeeCCCCCEEEEEECCCCCEEEEEeC-CC--cEEE
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFD---STVKLWDVELGKL--LYSLNGHREPVYSLAFSPTGEYLASGSL-DK--SMHI 456 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~d---g~i~iwd~~~~~~--~~~~~~h~~~v~~l~~spdg~~lasgs~-Dg--~i~i 456 (502)
. |++++. .+++....+ +.|..+|+.++.. ...+..|...+. .|+|++++|+.... ++ .|++
T Consensus 286 ~-~~~~g~--------~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~ 354 (693)
T 3iuj_A 286 L-VDNKGS--------TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQ 354 (693)
T ss_dssp E-EEEETT--------EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEE
T ss_pred E-EeccCC--------EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEE
Confidence 4 555553 244444443 6799999987653 235566666665 89999998877665 44 6899
Q ss_pred EeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEEECC----CeEEEEEe
Q 010759 457 WSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAACFAN----HTVCVLDF 500 (502)
Q Consensus 457 w~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~~~~----~~v~v~~~ 500 (502)
|++..+. ...+. ..+.+..++++++++.|+....+ ++|..||+
T Consensus 355 ~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~ 403 (693)
T 3iuj_A 355 FDYEGKR-VREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEP 403 (693)
T ss_dssp ECTTSCE-EEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECT
T ss_pred EECCCCe-eEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEEC
Confidence 9987554 34433 34457788899999988877665 78888875
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.41 E-value=3.8e-10 Score=106.26 Aligned_cols=226 Identities=12% Similarity=0.112 Sum_probs=146.7
Q ss_pred cccceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEE
Q 010759 153 HTSEVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATG 231 (502)
Q Consensus 153 H~~~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg 231 (502)
+..--.+..|+|+ +.++++...++.|..|+..++.. .. .. ....+.+++++++|+++++
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-----------~~---~~-----~~~~~~~i~~~~dG~l~v~- 70 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-----------QR---VT-----MDAPVSSVALRQSGGYVAT- 70 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-----------EE---EE-----CSSCEEEEEEBTTSSEEEE-
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-----------EE---Ee-----CCCceEEEEECCCCCEEEE-
Confidence 3444568899996 55777777889999999875431 00 10 1346899999999996554
Q ss_pred ECCCcEEEEECCCceeEeecCC-----CCCEEEEEecCCCCEEEEecCCC---------eEEEEeccCcceeEEeeeccc
Q 010759 232 SYDGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSCDK---------TAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~~~~~~h-----~~~V~~l~~~~~~~~l~sgs~D~---------~v~iwd~~~~~~~~~~~~~~~ 297 (502)
. ++.|.+|+........+... ...+..++++|+|+.+++..... ...+|.+...
T Consensus 71 ~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~----------- 138 (297)
T 3g4e_A 71 I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD----------- 138 (297)
T ss_dssp E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-----------
T ss_pred E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-----------
Confidence 3 56899999865443333221 23468899999998666543221 1122221110
Q ss_pred CeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeC--CCCce---
Q 010759 298 PTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNM--KQDKY--- 371 (502)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~--~~~~~--- 371 (502)
+ .+..+..+....+.++|+|+++.+ ++.+.++.|.+|++ .++..
T Consensus 139 -------------------g-----------~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~ 188 (297)
T 3g4e_A 139 -------------------H-----------HVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNR 188 (297)
T ss_dssp -------------------S-----------CEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEE
T ss_pred -------------------C-----------CEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCc
Confidence 0 011111112345789999999865 56666889999987 34432
Q ss_pred --eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEEC-CCCCEEEEE
Q 010759 372 --VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS-PTGEYLASG 448 (502)
Q Consensus 372 --~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pdg~~lasg 448 (502)
+..+.........+++.++|. +.++....+.|..||..+++.+..+..+...+++++|+ |+++.|..+
T Consensus 189 ~~~~~~~~~~~~p~g~~~d~~G~---------lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 189 RSVYKLEKEEQIPDGMCIDAEGK---------LWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp EEEEECCGGGCEEEEEEEBTTSC---------EEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEEEE
T ss_pred EEEEECCCCCCCCCeeEECCCCC---------EEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEEEE
Confidence 222333345677888988875 55666677889999999999998888777789999998 888766544
Q ss_pred e
Q 010759 449 S 449 (502)
Q Consensus 449 s 449 (502)
+
T Consensus 260 ~ 260 (297)
T 3g4e_A 260 C 260 (297)
T ss_dssp E
T ss_pred c
Confidence 4
No 217
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=8e-12 Score=120.69 Aligned_cols=166 Identities=10% Similarity=0.059 Sum_probs=128.4
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCCce-----------eEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEec
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNGDL-----------KCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDV 283 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~-----------~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~ 283 (502)
++..+++++...++++|+.++ +++|++..-. ......+.+ |+.|+| ++++|+++ .++.|++||+
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEc
Confidence 588999999999999999985 5559753111 112234666 999999 88999999 8899999999
Q ss_pred cCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEE
Q 010759 284 KTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKI 363 (502)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~i 363 (502)
.+.........+..++.++.+.... ++++..||.+++|++....... +...|.|++|||+| ++.|..||++++
T Consensus 114 ~sl~~~~~~~~~~~~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~~~~----~~~~Vs~v~WSpkG--~~vg~~dg~i~~ 186 (388)
T 1xip_A 114 EELSEFRTVTSFEKPVFQLKNVNNT-LVILNSVNDLSALDLRTKSTKQ----LAQNVTSFDVTNSQ--LAVLLKDRSFQS 186 (388)
T ss_dssp SSTTCEEEEEECSSCEEEEEECSSE-EEEEETTSEEEEEETTTCCEEE----EEESEEEEEECSSE--EEEEETTSCEEE
T ss_pred hhhhccCccceeecceeeEEecCCC-EEEEECCCCEEEEEccCCcccc----ccCCceEEEEcCCc--eEEEEcCCcEEE
Confidence 8776555666666777777765543 8888999999999998776543 44689999999999 678999999999
Q ss_pred EeCCCCce--eeec------c---cCCCcEEEEEEccCCC
Q 010759 364 WNMKQDKY--VHDL------R---EHSKEIYTIRWSPTGS 392 (502)
Q Consensus 364 wd~~~~~~--~~~~------~---~~~~~i~~~~~sp~g~ 392 (502)
|+...+.. ..++ . .|...|.+|.|.+++.
T Consensus 187 ~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~ 226 (388)
T 1xip_A 187 FAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD 226 (388)
T ss_dssp EEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE
T ss_pred EcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe
Confidence 98877664 4444 2 3678899999998764
No 218
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.39 E-value=1.2e-10 Score=110.09 Aligned_cols=238 Identities=13% Similarity=0.067 Sum_probs=148.1
Q ss_pred CCCceeeccccccceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE
Q 010759 143 PNSDVTILEGHTSEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW 221 (502)
Q Consensus 143 ~~~~~~~l~~H~~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~ 221 (502)
+...+..+..+.....+.+|+|+|+ +++++..++.|..|+.. +.. . .+. .....+..+++
T Consensus 33 ~~~~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~---------~--~~~-------~~~~~~~gl~~ 93 (305)
T 3dr2_A 33 GDARLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV---------D--VLL-------DATAFTNGNAV 93 (305)
T ss_dssp TTCCCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE---------E--EEE-------ESCSCEEEEEE
T ss_pred CCCceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE---------E--EEe-------CCCCccceeeE
Confidence 3344555655666778999999998 67777788999999863 210 1 111 12345889999
Q ss_pred CCCCCEEEEEECCCcEEEEECCCceeEeecCC----CCCEEEEEecCCCCEEEE----ecC-------------CCeEEE
Q 010759 222 NGEGTLLATGSYDGQARIWSTNGDLKCTLSKH----KGPIFSLKWNKKGDYLLT----GSC-------------DKTAIV 280 (502)
Q Consensus 222 s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h----~~~V~~l~~~~~~~~l~s----gs~-------------D~~v~i 280 (502)
+++|+++++...++.|.+|+..+......... ...+..+++.|+|+.+++ |.. .+.|..
T Consensus 94 d~dG~l~v~~~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~ 173 (305)
T 3dr2_A 94 DAQQRLVHCEHGRRAITRSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYR 173 (305)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEE
Confidence 99999777666668899999875433221111 123567888888887776 332 123444
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCC--
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDD-- 358 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d-- 358 (502)
||..+++.. .. . .....+.++|+|+++.|+.+...
T Consensus 174 ~d~~~g~~~-----------------------------------------~~-~-~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 174 LPPDGSPLQ-----------------------------------------RM-A-DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp ECSSSCCCE-----------------------------------------EE-E-EESSEEEEEECTTSSEEEEEECCC-
T ss_pred EcCCCCcEE-----------------------------------------EE-e-cCCCCcceEEcCCCCEEEEEecCCc
Confidence 443333211 11 1 12245679999999977666554
Q ss_pred ----CcEEEEeCCCCcee--eec-ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCC
Q 010759 359 ----VTAKIWNMKQDKYV--HDL-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHRE 431 (502)
Q Consensus 359 ----g~i~iwd~~~~~~~--~~~-~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~ 431 (502)
+.|.+|++..+... ..+ .........++++++|. +.+ +..+ .|.+|+. .++.+..+....
T Consensus 211 ~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~---------lwv-~~~~-gv~~~~~-~g~~~~~~~~~~- 277 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGW---------LWS-SSGT-GVCVFDS-DGQLLGHIPTPG- 277 (305)
T ss_dssp --CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSC---------EEE-CCSS-EEEEECT-TSCEEEEEECSS-
T ss_pred CCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCC---------EEE-ecCC-cEEEECC-CCCEEEEEECCC-
Confidence 68999998654311 011 11122334566677664 333 3344 4999998 477777776544
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEE
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
.+.+++|+|+++.|..++.++..+
T Consensus 278 ~~~~~~f~~d~~~L~it~~~~l~~ 301 (305)
T 3dr2_A 278 TASNCTFDQAQQRLFITGGPCLWM 301 (305)
T ss_dssp CCCEEEECTTSCEEEEEETTEEEE
T ss_pred ceeEEEEeCCCCEEEEEcCCeEEE
Confidence 588999999998888877765433
No 219
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.38 E-value=5.4e-11 Score=125.77 Aligned_cols=242 Identities=10% Similarity=0.108 Sum_probs=152.0
Q ss_pred cccccceeEEEECCCCCEEEE-----EeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCC
Q 010759 151 EGHTSEVCACAWSPAGSLLAS-----GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEG 225 (502)
Q Consensus 151 ~~H~~~V~~~~~spd~~~l~s-----gs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~ 225 (502)
.+|...+..++|||||++||- |+.+.+|++||+.++... . . ..... ....++|+ ||
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~--------~-~---~~~~~------k~~~~~Ws-Dg 185 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPL--------E-T---PLKDV------KFSGISWL-GN 185 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEE--------E-E---EEEEE------ESCCCEEE-TT
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCC--------c-c---ccCCc------eeccEEEe-CC
Confidence 357778999999999998883 444468999999887521 0 0 11100 02457899 99
Q ss_pred CEEEEEECCCc-------------EEEEECCCce---eEee--cC-CCCCEEEEEecCCCCEEEEecC----CCeEEEEe
Q 010759 226 TLLATGSYDGQ-------------ARIWSTNGDL---KCTL--SK-HKGPIFSLKWNKKGDYLLTGSC----DKTAIVWD 282 (502)
Q Consensus 226 ~~l~sg~~dg~-------------i~iw~~~~~~---~~~~--~~-h~~~V~~l~~~~~~~~l~sgs~----D~~v~iwd 282 (502)
+.|+.++.+.. |++|++.... ...+ .. |...+.++.|+|+|++|+..+. ...|++||
T Consensus 186 ~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d 265 (693)
T 3iuj_A 186 EGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKD 265 (693)
T ss_dssp TEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEE
T ss_pred CEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEE
Confidence 99999888744 8999876432 2222 23 4455788999999998754332 35899999
Q ss_pred ccCcc-eeEEeeecccCeEE-EecCCCceEEEEcC---CCeEEEEEcCCCcc--eeeecCCCcceeEEEEcCCCCEEEEE
Q 010759 283 VKTEE-WKQQFEFHSGPTLD-VDWRNNVSFATSST---DNMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASC 355 (502)
Q Consensus 283 ~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---d~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~sg 355 (502)
+.++. ....+..+...... +....+..++.+.. ...|+.+++..... ...+..|...+. .|+++++.|+..
T Consensus 266 ~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 266 LSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp TTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEE
T ss_pred CCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEE
Confidence 97763 22333333333322 33334444444443 36789999877654 345666666655 889999887766
Q ss_pred eCCC---cEEEEeCCCCceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeC---CCeEEEEeCCCCeE
Q 010759 356 SDDV---TAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASF---DSTVKLWDVELGKL 422 (502)
Q Consensus 356 s~dg---~i~iwd~~~~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~---dg~i~iwd~~~~~~ 422 (502)
..++ .|++|++..+. ...+.. ....+..+.++|++. .++++.+. -++|..||+.+++.
T Consensus 344 ~~~~g~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~--------~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 344 YMVDATARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDP--------ALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEETTEEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCS--------CEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEECCeeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCC--------EEEEEecCCCCCCEEEEEECCCCeE
Confidence 6544 68899987543 333332 234455666666554 23333332 27899999987764
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.38 E-value=1.3e-10 Score=113.79 Aligned_cols=264 Identities=8% Similarity=-0.008 Sum_probs=168.1
Q ss_pred CCCCEEEEEECC-----CcEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEec----------CCCeEEEEeccCc
Q 010759 223 GEGTLLATGSYD-----GQARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKTE 286 (502)
Q Consensus 223 ~~~~~l~sg~~d-----g~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs----------~D~~v~iwd~~~~ 286 (502)
+++..++..... +.|.+.|... ....++..-..+ .+.++|++++++.+. .++.|.++|+.+.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~ 159 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF 159 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC
Confidence 455655555442 6899999865 444455444455 899999999888776 3678999999999
Q ss_pred ceeEEeeec-------ccCeEEEecCC--CceEEEEcC-CCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEE
Q 010759 287 EWKQQFEFH-------SGPTLDVDWRN--NVSFATSST-DNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASC 355 (502)
Q Consensus 287 ~~~~~~~~~-------~~~~~~~~~~~--~~~~~~~~~-d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sg 355 (502)
+.+..+... ......+.+.. ...+++... ++.|.+.|..+.+.+..+.--. +....|++ ..+++.
T Consensus 160 ~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~ 235 (426)
T 3c75_H 160 LPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMN 235 (426)
T ss_dssp CEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEE
T ss_pred cEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEE
Confidence 988877643 11223344433 333444433 6889999999988777665211 12334443 556667
Q ss_pred eCCCcEEEEeCCCCceeee----cccCCCcE-EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE----Ee
Q 010759 356 SDDVTAKIWNMKQDKYVHD----LREHSKEI-YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLY----SL 426 (502)
Q Consensus 356 s~dg~i~iwd~~~~~~~~~----~~~~~~~i-~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~----~~ 426 (502)
+.||++.+.++.+++.... +.....++ ..+.+.+++. .+++ .+..+.|.+.|........ .+
T Consensus 236 ~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~--------~~~~-~s~~g~V~ViD~~~~~~~v~~~~~~ 306 (426)
T 3c75_H 236 CRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSG--------RLVW-PTYTGKIFQADLTAEGATFRAPIEA 306 (426)
T ss_dssp ETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTC--------EEEE-EBTTSEEEEEEECSSCEEECCCEES
T ss_pred cCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCC--------EEEE-EeCCCcEEEEeccCCceEEeeeeee
Confidence 7778777777755443321 11111111 1234455543 2333 3467899999987554321 11
Q ss_pred eC-C-------CCCEEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEE
Q 010759 427 NG-H-------REPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIA 487 (502)
Q Consensus 427 ~~-h-------~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la 487 (502)
.. . ......++|+|++..|..+.. .+.|.++|+.+++.+.++.......+++|+|||+ +++
T Consensus 307 ~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~~ly 386 (426)
T 3c75_H 307 LTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEPLLY 386 (426)
T ss_dssp SCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSCEEE
T ss_pred ccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCEEEE
Confidence 00 0 011223789999887665532 3579999999999999987655688999999999 888
Q ss_pred EEE-CCCeEEEEEee
Q 010759 488 ACF-ANHTVCVLDFR 501 (502)
Q Consensus 488 ~~~-~~~~v~v~~~~ 501 (502)
++. .++.|.|+|..
T Consensus 387 v~n~~s~~VsVID~~ 401 (426)
T 3c75_H 387 ALSAGTQTLHIYDAA 401 (426)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEcCCCCeEEEEECC
Confidence 777 58999999964
No 221
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.37 E-value=1.9e-09 Score=102.97 Aligned_cols=219 Identities=11% Similarity=-0.016 Sum_probs=140.3
Q ss_pred ceeEEEECCC-CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 156 EVCACAWSPA-GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 156 ~V~~~~~spd-~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
-..+.+|+|+ +.+++++..++.|.+|+..++.. .... ....|.+++|+++|+++++. .
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~--------------~~~~-----~~~~v~~i~~~~dg~l~v~~-~- 108 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRK--------------TVHA-----LPFMGSALAKISDSKQLIAS-D- 108 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEE--------------EEEE-----CSSCEEEEEEEETTEEEEEE-T-
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcE--------------EEEE-----CCCcceEEEEeCCCeEEEEE-C-
Confidence 3467899997 45667777789999999865421 1111 12468999999999887754 3
Q ss_pred CcEEEEECCCceeEeecCC-----CCCEEEEEecCCCCEEEEecCC------CeEEEEeccCcceeEEeeecccCeEEEe
Q 010759 235 GQARIWSTNGDLKCTLSKH-----KGPIFSLKWNKKGDYLLTGSCD------KTAIVWDVKTEEWKQQFEFHSGPTLDVD 303 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h-----~~~V~~l~~~~~~~~l~sgs~D------~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 303 (502)
..|.+|+..+.....+... ...+..++++|+|+.+++...+ +.|..++ +++..
T Consensus 109 ~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-------------- 172 (326)
T 2ghs_A 109 DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-------------- 172 (326)
T ss_dssp TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE--------------
T ss_pred CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE--------------
Confidence 4589999765433333221 2357889999999866654322 2233333 22111
Q ss_pred cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCC--CC-ce-----eee
Q 010759 304 WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMK--QD-KY-----VHD 374 (502)
Q Consensus 304 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~--~~-~~-----~~~ 374 (502)
.+..+....+.++|+|+++.+ ++.+.++.|.+|++. ++ .. +..
T Consensus 173 ----------------------------~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~ 224 (326)
T 2ghs_A 173 ----------------------------KLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFID 224 (326)
T ss_dssp ----------------------------EEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEE
T ss_pred ----------------------------EeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEE
Confidence 011111235689999999865 444567899999985 44 21 222
Q ss_pred cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEEC-CCCCEEEEEe
Q 010759 375 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFS-PTGEYLASGS 449 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~s-pdg~~lasgs 449 (502)
+.........+++.++|. +.++...++.|..||. +++.+..+..+...+++++|+ |++..|..++
T Consensus 225 ~~~~~~~p~gi~~d~~G~---------lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt~ 290 (326)
T 2ghs_A 225 STGIKGGMDGSVCDAEGH---------IWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 290 (326)
T ss_dssp CTTSSSEEEEEEECTTSC---------EEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred CCCCCCCCCeeEECCCCC---------EEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEEe
Confidence 222334567788888774 4555556688999998 577777777666679999998 8887665444
No 222
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.35 E-value=6.9e-11 Score=112.84 Aligned_cols=298 Identities=14% Similarity=0.071 Sum_probs=186.1
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEE
Q 010759 159 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQAR 238 (502)
Q Consensus 159 ~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~ 238 (502)
+..+..+|. |..|+.++.|..|| .++...... . .....+.++...++|.+++ ++.+ +.
T Consensus 24 ~~~~d~~g~-l~v~t~~~~l~~~d-~~g~~~~~~-------------~----~~~~~~~~~~~~~~g~l~v-~t~~--l~ 81 (330)
T 3hxj_A 24 SPILAKNGT-IYLGSSNKNLYAIN-TDGSVKWFF-------------K----SGEIIECRPSIGKDGTIYF-GSDK--VY 81 (330)
T ss_dssp CCEECTTSC-EECSSTTTTTEEEC-TTSCEEESS-------------C----GGGEEEECCEETTTTEECC-SSCE--EE
T ss_pred CceEccCCe-EEEEcCCCEEEEEC-CCCcEEEEE-------------e----cCCCcccceEEecCCcEEE-ecCc--EE
Confidence 344444554 55666788888898 665421110 0 0112345666667776544 4443 88
Q ss_pred EEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCe
Q 010759 239 IWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNM 318 (502)
Q Consensus 239 iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 318 (502)
.++..+.....+...........+. +..++.++.++.|..+|.. ++....+......+..+....+..+..++.++.
T Consensus 82 ~~d~~g~~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~ 158 (330)
T 3hxj_A 82 AINPDGTEKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNY 158 (330)
T ss_dssp EECCCGGGGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSE
T ss_pred EECCCCcEEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCE
Confidence 8886554433332222222222233 5678888889999999988 665554444333333333343455666777889
Q ss_pred EEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCC
Q 010759 319 IYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPN 398 (502)
Q Consensus 319 i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~ 398 (502)
++.++.. +..+..+......+.++...+++.++++. +.|..|| .+++.+..+......+.++...+++.
T Consensus 159 l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~------ 227 (330)
T 3hxj_A 159 LYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGT------ 227 (330)
T ss_dssp EEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSC------
T ss_pred EEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCe------
Confidence 9999987 66555555555567778887888766544 7899999 66666655554445566667666653
Q ss_pred CcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-CCEEEE
Q 010759 399 QQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-GGIFEV 477 (502)
Q Consensus 399 ~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-~~i~~~ 477 (502)
|..++.++.|..+|. +++.+..+......+.++.+.+++. |..++.+|.|..++. +++.+..+... ..+.++
T Consensus 228 ----l~v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~ 300 (330)
T 3hxj_A 228 ----IYVTSLDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHLYAINP-DGTEKWNFETGSWIIATP 300 (330)
T ss_dssp ----EEEEETTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEEEEECT-TSCEEEEEECSSCCCSCC
T ss_pred ----EEEEcCCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EEEecCCCCEEEECC-CCcEEEEEEcCCccccce
Confidence 445667888888874 5677776665544455566766664 566778888999996 67777666543 335677
Q ss_pred EECCCCCEEEEEECCCeEEEEEe
Q 010759 478 CWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 478 ~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
...++|+ |.+++.+|.+++...
T Consensus 301 ~~d~~g~-l~~gt~~G~~~~~~~ 322 (330)
T 3hxj_A 301 VIDENGT-IYFGTRNGKFYALFN 322 (330)
T ss_dssp EECTTCC-EEEECTTSCEEEEEC
T ss_pred EEcCCCE-EEEEcCCCeEEEEec
Confidence 7778886 556888898887754
No 223
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.35 E-value=2.5e-09 Score=104.20 Aligned_cols=303 Identities=10% Similarity=0.064 Sum_probs=183.6
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeeccc---ccCCCCeEEEEECCCCCEEEEEECCCcEEEEE
Q 010759 165 AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRT---NEKSKDVTTLDWNGEGTLLATGSYDGQARIWS 241 (502)
Q Consensus 165 d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~ 241 (502)
.+..|+.++.++.|..+|..+++.... .. ..... ......+.+. ...++..++.++.++.|..+|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~----------~~-~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d 119 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWS----------VS-LAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALN 119 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEE----------EE-CCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeee----------ec-CccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEE
Confidence 366788888899999999887753211 10 00000 0001122211 112355777888999999999
Q ss_pred CC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe-----EEEecCCCceEEEEcC
Q 010759 242 TN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-----LDVDWRNNVSFATSST 315 (502)
Q Consensus 242 ~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 315 (502)
.. +.................. .+..++.++.++.|..+|+.+++....+....... ...... +..++.+..
T Consensus 120 ~~tG~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~v~~g~~ 196 (376)
T 3q7m_A 120 TSDGTVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FGAAVVGGD 196 (376)
T ss_dssp TTTCCEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TTEEEECCT
T ss_pred CCCCCEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CCEEEEEcC
Confidence 75 5555444332211111111 24578888999999999999998766554422111 011111 334566677
Q ss_pred CCeEEEEEcCCCcceeeecCCC--cc--ee---EEEEcC--CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEE
Q 010759 316 DNMIYVCKIGENRPIKTFAGHQ--GE--VN---CVKWDP--TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 316 d~~i~~~~~~~~~~~~~~~~h~--~~--v~---~v~~~p--~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~ 386 (502)
++.++.++..+++.+-.+.... +. +. .+...| .+..++.++.++.+..+|..+++.+..... .....+.
T Consensus 197 ~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~ 274 (376)
T 3q7m_A 197 NGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFI 274 (376)
T ss_dssp TTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEE
T ss_pred CCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEECCCCcEEeeccC--CCCCCce
Confidence 8899999988877654443211 00 00 000111 245677788899999999999887755432 2233333
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-CCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 465 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 465 (502)
.. .+ .+..++.++.|..+|..+++.++..... ...+..... .+..|+.++.+|.|.++|..+|+++
T Consensus 275 ~~-~~----------~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~ 341 (376)
T 3q7m_A 275 VD-GN----------RIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFV 341 (376)
T ss_dssp EE-TT----------EEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEE
T ss_pred EE-CC----------EEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEE
Confidence 32 22 4566778999999999999998887622 222223333 2567888999999999999999998
Q ss_pred EEEec-CCCEEE-EEECCCCCEEEEEECCCeEEEEE
Q 010759 466 KTYTG-NGGIFE-VCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 466 ~~~~~-~~~i~~-~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
..+.. ...+.. +.. .+..|.+++.+|.|+.|+
T Consensus 342 ~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 342 AQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp EEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred EEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 87765 233221 111 356888899999999886
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.34 E-value=2.8e-14 Score=138.96 Aligned_cols=257 Identities=15% Similarity=0.112 Sum_probs=140.9
Q ss_pred CCCEEEEEECCCcEEEEECC-CceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE--
Q 010759 224 EGTLLATGSYDGQARIWSTN-GDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL-- 300 (502)
Q Consensus 224 ~~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~-- 300 (502)
++..+++++.||.|+.||.. ++....+.. +++.+..+..++..+++++.|+.|+.||+.+++.+..+..+.....
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 46789999999999999964 566666654 4555555566777888889999999999988876655544321100
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK 380 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~ 380 (502)
......+..+++++.++.++.|+..+++.+..+..+. ...++|++..+++++.|+.|+.||..+++.+..+....
T Consensus 86 sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~- 160 (369)
T 2hz6_A 86 SPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKTRELRWNATYFD- 160 (369)
T ss_dssp CSCC-----CCCCEEEEEEEEECCC--------------------------EEEEEEEEEEECCCSSSSSCCCEEEEEE-
T ss_pred CceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCCCCEEEeEeccc-
Confidence 0011123345566778899999998888776665443 23456788899999999999999999988765443211
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEE-EEECCCCCEE----EEEeCCCcEE
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYS-LAFSPTGEYL----ASGSLDKSMH 455 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~-l~~spdg~~l----asgs~Dg~i~ 455 (502)
.....+.++. ..+. .++.++.||.|+.||..+|+.++.... ..++.. ..++++|... +.+ ++.++
T Consensus 161 -~~~~~~~~~~----~~~~--~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~~~~~~~dg~~~v~~~~~~--~~~l~ 230 (369)
T 2hz6_A 161 -YAASLPEDDV----DYKM--SHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVAFYVWQREGLRKVMHINVA--VETLR 230 (369)
T ss_dssp -ECCBCCCCCT----TCCC--CEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEEEEECTTSSCEEECCEEEE--HHHHH
T ss_pred -ccCccccCCc----cccc--eEEEECCCCEEEEEECCCCcEEEEecC-CCceEEEEEecCCceEeccceeec--cccee
Confidence 1111111111 0001 355688899999999999999998873 445543 4566677532 222 44567
Q ss_pred EEeCCCCe----eEEEEecCCCEEEEEECC--CCCEEEEEECCCeEEEEEee
Q 010759 456 IWSLKEGK----IVKTYTGNGGIFEVCWNK--EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~----~~~~~~~~~~i~~~~ws~--~g~~la~~~~~~~v~v~~~~ 501 (502)
.++..+|+ .+..+...+.+. +| .+..|.+++.+|.++.++.+
T Consensus 231 ~ld~~tG~~~~~~~W~~~~~~~~~----sp~~~~g~lyv~~~~G~l~al~~~ 278 (369)
T 2hz6_A 231 YLTFMSGEVGRITKWKYPFPKETE----AKSKLTPTLYVGKYSTSLYASPSM 278 (369)
T ss_dssp HHHHHHHHHHHHHTSCCCCCCHHH----HHHHSEEEECBEECSSCEECCEEE
T ss_pred eeehhcCCcccceeeeeccCcccc----ccccccceEEEecccCCEEecCcc
Confidence 77776666 544443222221 22 23466677777777776653
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=9.3e-11 Score=112.93 Aligned_cols=269 Identities=12% Similarity=0.063 Sum_probs=160.2
Q ss_pred cceeEEEECCCCCEEEEEe--CCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEE
Q 010759 155 SEVCACAWSPAGSLLASGS--GDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs--~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
..+..++++|+|+++++.. .++.++||.+.++... ...........+...+..+++.++|+++++-.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-----------~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~ 85 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-----------PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDN 85 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-----------ESCCCCSSCCCCCSCEEEEEECSSSEEEEEEC
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-----------cCCCcccCcccceeEeeEEEEcCCCcEEEEcC
Confidence 5789999999999998864 2344777776532110 00000001112346799999999998776654
Q ss_pred C-----CCcEEEEECCC-ceeEeecC------CCCCEEEEEecCCCCE-EEEec---CCCeEEEEeccCcceeEEeeecc
Q 010759 233 Y-----DGQARIWSTNG-DLKCTLSK------HKGPIFSLKWNKKGDY-LLTGS---CDKTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 233 ~-----dg~i~iw~~~~-~~~~~~~~------h~~~V~~l~~~~~~~~-l~sgs---~D~~v~iwd~~~~~~~~~~~~~~ 296 (502)
. ++.|.+||... .....+.. +...+..+++++++.. +++.+ .++.|.+||+.+++....+..|.
T Consensus 86 g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~ 165 (343)
T 2qe8_A 86 GNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYP 165 (343)
T ss_dssp HHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCT
T ss_pred CCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCC
Confidence 3 57899999864 43444332 2234678999986544 45555 68899999998887655543321
Q ss_pred cCeE-EEec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCC-----
Q 010759 297 GPTL-DVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQD----- 369 (502)
Q Consensus 297 ~~~~-~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~----- 369 (502)
.... ...+ .+...|...+.++.+..|. ..++.++|+|+|+.|+.+..++. ++|.+...
T Consensus 166 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~~ly~~~~~~~-~l~~~~~~~~~~~ 230 (343)
T 2qe8_A 166 GIAPEDIDLVIDGVPVQIGQPDGTVIRPH--------------LGVNGIVLDAENEWLYLSPMHST-SMYRIKSADLSNL 230 (343)
T ss_dssp TTSCCSCCCEETTEECBEECTTSCEECCC--------------CCEEEEEECTTSCEEEEEESSCS-EEEEEEHHHHTCT
T ss_pred cccccccceeECCEEEEeccCCCceecee--------------cccceeEeccCCCEEEEEeCCCC-eEEEEEHHHhcCC
Confidence 1100 0111 0112222233344332221 23678999999998888877663 44443211
Q ss_pred c-----eeeec--ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC-CCCCEEEEEECCC
Q 010759 370 K-----YVHDL--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG-HREPVYSLAFSPT 441 (502)
Q Consensus 370 ~-----~~~~~--~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~-h~~~v~~l~~spd 441 (502)
. ....+ .++......++++++|. ++++...++.|.+||..+++....... +....++++|.++
T Consensus 231 ~~~~~~~~~~~~~~g~~g~pdgia~d~~G~---------l~va~~~~~~V~~~d~~~G~~~~~~~~~~~~~p~~va~~~~ 301 (343)
T 2qe8_A 231 QLTDAELGSKIERYSEKPICDGISIDKDHN---------IYVGDLAHSAIGVITSADRAYKLLVTDEKLSWTDSFNFGSD 301 (343)
T ss_dssp TCCHHHHHTTCEEEEECCSCSCEEECTTCC---------EEEEEGGGTEEEEEETTTTEEEEEEECGGGSCEEEEEECTT
T ss_pred CCChhhhhcceEecccCCCCceEEECCCCC---------EEEEccCCCeEEEEECCCCCEEEEEECCceecCCeeEECCC
Confidence 0 00001 11222344577777764 667777889999999856764333322 2456899999999
Q ss_pred CCEEEEEeCCCcEEEEe
Q 010759 442 GEYLASGSLDKSMHIWS 458 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~ 458 (502)
|+++++.+..+.+.+|.
T Consensus 302 g~l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 302 GYLYFDCNQLHHSAPLN 318 (343)
T ss_dssp SCEEEEECCGGGSGGGB
T ss_pred CcEEEEeCccccccccc
Confidence 99888887666555444
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.31 E-value=6.1e-10 Score=117.11 Aligned_cols=304 Identities=11% Similarity=0.108 Sum_probs=177.7
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccc-cCC-CCe-EEEEECCCCCEEEEEECCCcEEEEEC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN-EKS-KDV-TTLDWNGEGTLLATGSYDGQARIWST 242 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~V-~~l~~s~~~~~l~sg~~dg~i~iw~~ 242 (502)
+..|+.++.++.|.-+|..+|+........ ...... ... ..+ ..++. .+..++.++.|+.+..+|.
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~---------~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa 138 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQ---------SDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDA 138 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCC---------CCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCC---------CCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEEC
Confidence 566777778899999998887643211100 000000 000 000 01111 3567888899999999997
Q ss_pred C-CceeEeecC--CCCCEEEEEecC--CCCEEEEec------CCCeEEEEeccCcceeEEeeecc-cC------------
Q 010759 243 N-GDLKCTLSK--HKGPIFSLKWNK--KGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFHS-GP------------ 298 (502)
Q Consensus 243 ~-~~~~~~~~~--h~~~V~~l~~~~--~~~~l~sgs------~D~~v~iwd~~~~~~~~~~~~~~-~~------------ 298 (502)
. ++.+..+.. +......+..+| .+..++.++ .++.|+.||+.+++.+-.+.... .+
T Consensus 139 ~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~ 218 (689)
T 1yiq_A 139 KTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIA 218 (689)
T ss_dssp TTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHH
T ss_pred CCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccc
Confidence 5 555544432 111111111122 133455544 37899999999999776654211 00
Q ss_pred --------------------eEEEecCCCceEEEEcCCC-------------------eEEEEEcCCCcceeeecC--CC
Q 010759 299 --------------------TLDVDWRNNVSFATSSTDN-------------------MIYVCKIGENRPIKTFAG--HQ 337 (502)
Q Consensus 299 --------------------~~~~~~~~~~~~~~~~~d~-------------------~i~~~~~~~~~~~~~~~~--h~ 337 (502)
...++... ..+..+..++ .|+.+|..+++.+-.+.. |.
T Consensus 219 ~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d 297 (689)
T 1yiq_A 219 AKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD 297 (689)
T ss_dssp HTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC
T ss_pred ccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc
Confidence 11122122 2334444443 489999998887765543 21
Q ss_pred -------cceeEEEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecccCC-CcEE-----------------------
Q 010759 338 -------GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHS-KEIY----------------------- 383 (502)
Q Consensus 338 -------~~v~~v~~~p~~~---~l~sgs~dg~i~iwd~~~~~~~~~~~~~~-~~i~----------------------- 383 (502)
..+.......+|+ .++.++.+|.++++|..+++.+....... ....
T Consensus 298 ~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~ 377 (689)
T 1yiq_A 298 AWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGK 377 (689)
T ss_dssp CSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSS
T ss_pred cccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCC
Confidence 1222223334665 78899999999999999998874322111 0000
Q ss_pred ---------------EEEEccCCCCCCCCCCcEEEEEEe-----------------------------------------
Q 010759 384 ---------------TIRWSPTGSGTNNPNQQLILASAS----------------------------------------- 407 (502)
Q Consensus 384 ---------------~~~~sp~g~~~~~~~~~~~l~sgs----------------------------------------- 407 (502)
.++++|.. .++.+...
T Consensus 378 ~~~~~p~~~Gg~~w~~~a~dp~~--------~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~ 449 (689)
T 1yiq_A 378 RNLVTPAFWGAHDWQPMSYNPDT--------GLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEM 449 (689)
T ss_dssp CEEESSCTTCSSCSSCCEEETTT--------TEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHH
T ss_pred eeEeCCCcccccCCCcceECCCC--------CEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCC
Confidence 02333322 22222110
Q ss_pred ---CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCC
Q 010759 408 ---FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKE 482 (502)
Q Consensus 408 ---~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~ 482 (502)
.+|.|+.||+.+++.++++..+. ++..-.++..+.+++.|+.||.|+.||.++|+++..+....++ .-+.|..+
T Consensus 450 ~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~ 528 (689)
T 1yiq_A 450 AKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVD 528 (689)
T ss_dssp HTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEET
T ss_pred CCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEEC
Confidence 14889999999999999887543 3444456667889999999999999999999999988754433 34778889
Q ss_pred CC-EEEEEE
Q 010759 483 GD-KIAACF 490 (502)
Q Consensus 483 g~-~la~~~ 490 (502)
|+ ++++.+
T Consensus 529 G~qyv~~~~ 537 (689)
T 1yiq_A 529 GEQYVTFMA 537 (689)
T ss_dssp TEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 97 444443
No 227
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=8.7e-10 Score=115.73 Aligned_cols=302 Identities=11% Similarity=0.093 Sum_probs=179.2
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccc--cCCCCeEEEEECCCCCEEEEEECCCcEEEEECC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTN--EKSKDVTTLDWNGEGTLLATGSYDGQARIWSTN 243 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~ 243 (502)
+..|+.++.++.|.-+|..+|+........ ....... ........+++ .+..++.++.|+.+..+|..
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~--------~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~ 146 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQ--------IDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAA 146 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCC--------CCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCC--------CCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECC
Confidence 556667777888888998877532211100 0000000 00000011222 35678888999999999974
Q ss_pred -CceeEeecCC-C----CCEEEEEecCCCCEEEEecC------CCeEEEEeccCcceeEEeeecccC-------------
Q 010759 244 -GDLKCTLSKH-K----GPIFSLKWNKKGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHSGP------------- 298 (502)
Q Consensus 244 -~~~~~~~~~h-~----~~V~~l~~~~~~~~l~sgs~------D~~v~iwd~~~~~~~~~~~~~~~~------------- 298 (502)
++.+..+..+ . ..+.+--.- .+..++.++. ++.|+.||+.+++.+-.+......
T Consensus 147 tG~~~W~~~~~~~~~~~~~~~~~p~v-~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g 225 (677)
T 1kb0_A 147 TGKEVWHQNTFEGQKGSLTITGAPRV-FKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRA 225 (677)
T ss_dssp TCCEEEEEETTTTCCSSCBCCSCCEE-ETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHH
T ss_pred CCCEEeeecCCcCcCcCcccccCcEE-ECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccc
Confidence 6666555443 1 111110000 2345666554 799999999999977666532211
Q ss_pred ---------------------eEEEecCCCceEEEEcCC-------------------CeEEEEEcCCCcceeeecC--C
Q 010759 299 ---------------------TLDVDWRNNVSFATSSTD-------------------NMIYVCKIGENRPIKTFAG--H 336 (502)
Q Consensus 299 ---------------------~~~~~~~~~~~~~~~~~d-------------------~~i~~~~~~~~~~~~~~~~--h 336 (502)
...++...+..++ +..+ +.|+.+|..+++.+-.+.. |
T Consensus 226 ~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~-~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~ 304 (677)
T 1kb0_A 226 ARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYV-GTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPG 304 (677)
T ss_dssp HTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEE-ECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTT
T ss_pred cccccccCceeEeCCCcccccceeEcCCCCEEEE-ECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCC
Confidence 0112222333333 3222 2588888888877655442 2
Q ss_pred C-------cceeEEEEcCCC---CEEEEEeCCCcEEEEeCCCCceeeecccCCC-----------cEE------------
Q 010759 337 Q-------GEVNCVKWDPTG---SLLASCSDDVTAKIWNMKQDKYVHDLREHSK-----------EIY------------ 383 (502)
Q Consensus 337 ~-------~~v~~v~~~p~~---~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~-----------~i~------------ 383 (502)
. .....+....+| ..++.++.+|.+.++|..+++.+..+..... ++.
T Consensus 305 d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~ 384 (677)
T 1kb0_A 305 DNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQD 384 (677)
T ss_dssp CCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEE
T ss_pred cccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccE
Confidence 1 122233444577 6899999999999999999998765442210 010
Q ss_pred ------------EEEEccCCCCCCCCCCcEEEEEEe------------------------------------------CC
Q 010759 384 ------------TIRWSPTGSGTNNPNQQLILASAS------------------------------------------FD 409 (502)
Q Consensus 384 ------------~~~~sp~g~~~~~~~~~~~l~sgs------------------------------------------~d 409 (502)
.++++|++ .++++... ..
T Consensus 385 ~~P~~~G~~~w~~~a~dp~~--------~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 456 (677)
T 1kb0_A 385 AVPGPYGAHNWHPMSFNPQT--------GLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPF 456 (677)
T ss_dssp CSSCTTCSSCSSCCEEETTT--------TEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCE
T ss_pred ECcCcccccCCCCceEcCCC--------CEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCc
Confidence 12333332 22322211 12
Q ss_pred CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCCCCEEE
Q 010759 410 STVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKEGDKIA 487 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~g~~la 487 (502)
|.|..||+.+++.++++. +..++....++..+..++.++.||.|++||+.+|+++..+....++ .-+.|.++|+.++
T Consensus 457 g~l~A~D~~tG~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v 535 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYV 535 (677)
T ss_dssp EEEEEEETTTTEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred cEEEEEeCCCCcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEE
Confidence 789999999999999886 3345556667778888999999999999999999999998754332 3466778997444
Q ss_pred E
Q 010759 488 A 488 (502)
Q Consensus 488 ~ 488 (502)
+
T Consensus 536 ~ 536 (677)
T 1kb0_A 536 S 536 (677)
T ss_dssp E
T ss_pred E
Confidence 3
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.29 E-value=2.7e-10 Score=109.66 Aligned_cols=246 Identities=7% Similarity=-0.060 Sum_probs=157.2
Q ss_pred EEEECCCCCEEEEEE----------CCCcEEEEECCC-ceeEeecCC-------CCCEEEEEecCCCCEEEEecC--CCe
Q 010759 218 TLDWNGEGTLLATGS----------YDGQARIWSTNG-DLKCTLSKH-------KGPIFSLKWNKKGDYLLTGSC--DKT 277 (502)
Q Consensus 218 ~l~~s~~~~~l~sg~----------~dg~i~iw~~~~-~~~~~~~~h-------~~~V~~l~~~~~~~~l~sgs~--D~~ 277 (502)
.++++||+++++++. .++.|.+||... ....++... ......+.|+|+|++++.+.. ...
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~ 148 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAA 148 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCE
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCe
Confidence 699999999998886 368899999865 444454322 122467899999999988864 467
Q ss_pred EEE--EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC-----Cccee----eecCCCcceeEEEEc
Q 010759 278 AIV--WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-----NRPIK----TFAGHQGEVNCVKWD 346 (502)
Q Consensus 278 v~i--wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-----~~~~~----~~~~h~~~v~~v~~~ 346 (502)
+.+ +|+.+ +..+.... . ..+.......+++.+.|+.+.+.++.. ++.+. .+.-...+. . +
T Consensus 149 v~V~~iD~~t---v~~i~v~~-~-~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~ 219 (368)
T 1mda_H 149 AGLSVPGASD---DQLTKSAS-C-FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-A 219 (368)
T ss_dssp EEEEETTTEE---EEEEECSS-C-CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-E
T ss_pred EEEEEEchhh---ceEEECCC-c-eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-c
Confidence 888 99877 33332211 1 112223344566667788877777765 22211 011112233 3 5
Q ss_pred CCCCEEEEEeCCCcEEEEeCCCCc--eeeeccc-------CC---CcEEEEEEccCCCCCCCCCCcEEEEEEe---C---
Q 010759 347 PTGSLLASCSDDVTAKIWNMKQDK--YVHDLRE-------HS---KEIYTIRWSPTGSGTNNPNQQLILASAS---F--- 408 (502)
Q Consensus 347 p~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~-------~~---~~i~~~~~sp~g~~~~~~~~~~~l~sgs---~--- 408 (502)
+++..++..+. +.+.+.|+.... .+..+.. +. .....++++|++. .++++.. .
T Consensus 220 ~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~--------~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 220 NYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTD--------GIMILTVEHSRSCL 290 (368)
T ss_dssp TTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTT--------EEEEEEEECSSCTT
T ss_pred ccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCC--------EEEEEeccccCccc
Confidence 66666666666 899999986532 2222211 00 1111157888875 2333322 2
Q ss_pred --CCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCC-EEEEEe-CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCC
Q 010759 409 --DSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGE-YLASGS-LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKE 482 (502)
Q Consensus 409 --dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~-~lasgs-~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~ 482 (502)
++.+.++|+.+++.+.++.... ....|+|+|||+ .+++.. .++.|.++|+.++++++++........+++++.
T Consensus 291 ~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~~ 367 (368)
T 1mda_H 291 AAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQNE 367 (368)
T ss_dssp SCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCCC
T ss_pred ccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeecC
Confidence 2356699999999988775432 578999999997 556666 599999999999999999876666667776653
No 229
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.29 E-value=4.3e-10 Score=118.02 Aligned_cols=269 Identities=10% Similarity=0.025 Sum_probs=174.8
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCCC-----------CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG-----------PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~-----------~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
+..++.++.++.|..+|.. ++.+..+..... ...++.+ .+..++.++.|+.|..+|..+++.+-.+
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 154 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATGKEVWHQ 154 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCCCEEeee
Confidence 3456666677888888864 444444332211 0012222 3568899999999999999999987766
Q ss_pred eec-c----cCeE-EEecCCCceEEEEc-----CCCeEEEEEcCCCcceeeecCCC------------------------
Q 010759 293 EFH-S----GPTL-DVDWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGHQ------------------------ 337 (502)
Q Consensus 293 ~~~-~----~~~~-~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h~------------------------ 337 (502)
... . ..+. ......+..++.++ .++.|+.+|..+++.+-.+....
T Consensus 155 ~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~ 234 (677)
T 1kb0_A 155 NTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGK 234 (677)
T ss_dssp ETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGC
T ss_pred cCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCc
Confidence 543 1 0111 01112333344333 26899999998887665443211
Q ss_pred --------cceeEEEEcCCCCEEEEEeCCC-------------------cEEEEeCCCCceeeeccc--CC-------Cc
Q 010759 338 --------GEVNCVKWDPTGSLLASCSDDV-------------------TAKIWNMKQDKYVHDLRE--HS-------KE 381 (502)
Q Consensus 338 --------~~v~~v~~~p~~~~l~sgs~dg-------------------~i~iwd~~~~~~~~~~~~--~~-------~~ 381 (502)
.....++++|++.+|+.++.++ .|..+|..+++.+-.++. |. ..
T Consensus 235 ~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~ 314 (677)
T 1kb0_A 235 WWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQP 314 (677)
T ss_dssp HHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSC
T ss_pred eeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCC
Confidence 1123578899999988887764 489999999988755443 21 11
Q ss_pred EEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----------CCE-----------------
Q 010759 382 IYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----------EPV----------------- 433 (502)
Q Consensus 382 i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----------~~v----------------- 433 (502)
..-+....+|. ...+++.++.+|.|+++|..+|+.+..+.-.. .++
T Consensus 315 p~l~~~~~dG~------~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~ 388 (677)
T 1kb0_A 315 MILADIKIAGK------PRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPG 388 (677)
T ss_dssp CEEEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSC
T ss_pred cEEEecccCCc------EeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcC
Confidence 11112222331 01267889999999999999999988765221 111
Q ss_pred -------EEEEECCCCCEEEEEeC-------------------------------------------CCcEEEEeCCCCe
Q 010759 434 -------YSLAFSPTGEYLASGSL-------------------------------------------DKSMHIWSLKEGK 463 (502)
Q Consensus 434 -------~~l~~spdg~~lasgs~-------------------------------------------Dg~i~iw~~~~~~ 463 (502)
..++|+|++.++++... .|.|..||+.+|+
T Consensus 389 ~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~ 468 (677)
T 1kb0_A 389 PYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQK 468 (677)
T ss_dssp TTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTE
T ss_pred cccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCc
Confidence 15789999887776542 2789999999999
Q ss_pred eEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 464 IVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 464 ~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
++..+.....+++..+.++|.+++.++.++.+++||.+
T Consensus 469 ~~W~~~~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~ 506 (677)
T 1kb0_A 469 AAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAA 506 (677)
T ss_dssp EEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred EEeecCCCCCCcCcceEeCCCEEEEECCCCcEEEEECC
Confidence 99888765555556677888899999999999999964
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=99.27 E-value=1e-09 Score=115.42 Aligned_cols=269 Identities=11% Similarity=0.051 Sum_probs=173.6
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCCC----------CE-EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG----------PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~----------~V-~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
+..++.++.++.|..+|.. ++.+..+..+.. .+ .++.+ .+..++.++.|+.|..+|..+++.+-.+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~g~v~v~~~dg~l~AlDa~TG~~~W~~ 147 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAV--WKGKVYVGVLDGRLEAIDAKTGQRAWSV 147 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEE--ECCEEEEEccCCEEEEEECCCCCEeeee
Confidence 4566677778888888864 555555432211 00 11111 3568889999999999999999977665
Q ss_pred eec-c-cCeEEE----ecCCCceEEEEc-----CCCeEEEEEcCCCcceeeecCC-------------------------
Q 010759 293 EFH-S-GPTLDV----DWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGH------------------------- 336 (502)
Q Consensus 293 ~~~-~-~~~~~~----~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h------------------------- 336 (502)
... . .....+ ...++..++.++ .++.|+.+|..+++.+-.+...
T Consensus 148 ~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w 227 (689)
T 1yiq_A 148 DTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAY 227 (689)
T ss_dssp ECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTH
T ss_pred cCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCcee
Confidence 542 1 000000 111333344332 3688999999888766544310
Q ss_pred ------CcceeEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCceeeeccc--CC-------CcE
Q 010759 337 ------QGEVNCVKWDPTGSLLASCSDDVT-------------------AKIWNMKQDKYVHDLRE--HS-------KEI 382 (502)
Q Consensus 337 ------~~~v~~v~~~p~~~~l~sgs~dg~-------------------i~iwd~~~~~~~~~~~~--~~-------~~i 382 (502)
......++++|++.+|+.++.++. |..||..+++.+-.++. |. .+.
T Consensus 228 ~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~ 307 (689)
T 1yiq_A 228 VEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHM 307 (689)
T ss_dssp HHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCE
T ss_pred eecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCc
Confidence 011135788998899999988864 99999999988765543 21 111
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-CC-----------------------------
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-EP----------------------------- 432 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-~~----------------------------- 432 (502)
.......+|. ...+++.++.+|.++++|..+|+.+....-.. ..
T Consensus 308 ~l~d~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~ 381 (689)
T 1yiq_A 308 ILAELPIDGK------PRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLV 381 (689)
T ss_dssp EEEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEE
T ss_pred EEEeeccCCc------EEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEe
Confidence 1111111221 01257789999999999999999985432111 00
Q ss_pred ---------EEEEEECCCCCEEEEEeC---------------------------------------------CCcEEEEe
Q 010759 433 ---------VYSLAFSPTGEYLASGSL---------------------------------------------DKSMHIWS 458 (502)
Q Consensus 433 ---------v~~l~~spdg~~lasgs~---------------------------------------------Dg~i~iw~ 458 (502)
...++|+|+..+|++.+. +|.|..||
T Consensus 382 ~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D 461 (689)
T 1yiq_A 382 TPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWD 461 (689)
T ss_dssp SSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEE
T ss_pred CCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEE
Confidence 112788998877776522 47899999
Q ss_pred CCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 459 LKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 459 ~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+.+|+++..+.....+....+...|.+++.|+.|+.|++||.+
T Consensus 462 ~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~ 504 (689)
T 1yiq_A 462 PVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAAD 504 (689)
T ss_dssp TTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECC
Confidence 9999999888765544445667788899999999999999964
No 231
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.24 E-value=8.2e-12 Score=121.52 Aligned_cols=203 Identities=13% Similarity=0.102 Sum_probs=120.0
Q ss_pred CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec-CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcc-ee-
Q 010759 265 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW-RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGE-VN- 341 (502)
Q Consensus 265 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~-v~- 341 (502)
++..+++++.|+.|+.||+.+++.+..+.. +++....+ .++..+++++.|+.++.|+..+++.+..+..+... +.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~ 85 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQA 85 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcccccc
Confidence 467899999999999999999998777665 33333222 33446777789999999999777665554433211 11
Q ss_pred EEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010759 342 CVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK 421 (502)
Q Consensus 342 ~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 421 (502)
+..+. .+..|++|+.|+.|+.||..+++.+..+..+. ...++|.+. .+++++.|+.|+.||.++|+
T Consensus 86 sp~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p~~~---------~v~~~~~dg~v~a~d~~tG~ 151 (369)
T 2hz6_A 86 SPCRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSPSTS---------LLYLGRTEYTITMYDTKTRE 151 (369)
T ss_dssp CSCC------CCCCEEEEEEEEECCC-----------------------------------EEEEEEEEEEECCCSSSSS
T ss_pred CceEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccccCC---------EEEEEecCCEEEEEECCCCC
Confidence 11111 34567788899999999999998876665433 123445332 56778889999999999998
Q ss_pred EEEEeeCCCCCEEEEEECCCC---CEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEE-EEEECCCCCE
Q 010759 422 LLYSLNGHREPVYSLAFSPTG---EYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIF-EVCWNKEGDK 485 (502)
Q Consensus 422 ~~~~~~~h~~~v~~l~~spdg---~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~-~~~ws~~g~~ 485 (502)
.++.+..+. ....+++++. ..+++++.||.|+.||..+|+.+..+.....+. ..+++++|..
T Consensus 152 ~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~~~pv~~~~~~~~dg~~ 217 (369)
T 2hz6_A 152 LRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNYASPVVAFYVWQREGLR 217 (369)
T ss_dssp CCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEEEEEECSSCEEEEEECTTSSCE
T ss_pred EEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEEEEecCCCceEEEEEecCCceE
Confidence 876654221 1223344432 567778999999999999999988877555544 4566777753
No 232
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.14 E-value=3.1e-08 Score=96.34 Aligned_cols=259 Identities=8% Similarity=0.030 Sum_probs=161.3
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCC---------CCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKH---------KGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h---------~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
+..++.++.++.|..+|.. +.....+... ...+.+. ....+..++.++.++.|..+|..+++..-.+..
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~ 131 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTKV 131 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEEC
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEeC
Confidence 4577778888999999975 5554444321 1223221 122456788899999999999999987655544
Q ss_pred cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce-----eEEEEcCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 295 HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV-----NCVKWDPTGSLLASCSDDVTAKIWNMKQD 369 (502)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~l~sgs~dg~i~iwd~~~~ 369 (502)
.......... .+..++.++.++.++.++..+++.+-.+....... ...... +..++.++.++.+..+|..++
T Consensus 132 ~~~~~~~p~~-~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 132 AGEALSRPVV-SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp SSCCCSCCEE-ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTC
T ss_pred CCceEcCCEE-ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCC
Confidence 3221111111 13356667778899999988877665544322110 112222 456777888999999999988
Q ss_pred ceeeecccCCCc----EEE---EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCC
Q 010759 370 KYVHDLREHSKE----IYT---IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTG 442 (502)
Q Consensus 370 ~~~~~~~~~~~~----i~~---~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg 442 (502)
+.+-........ +.. +...|.- ... .+..++.++.|..+|..+++.++.... .....+.. ++
T Consensus 209 ~~~w~~~~~~~~~~~~~~~~~~~~~~p~~------~~~-~v~~~~~~g~l~~~d~~tG~~~w~~~~--~~~~~~~~--~~ 277 (376)
T 3q7m_A 209 QMIWQQRISQATGSTEIDRLSDVDTTPVV------VNG-VVFALAYNGNLTALDLRSGQIMWKREL--GSVNDFIV--DG 277 (376)
T ss_dssp CEEEEEECCC-----------CCCCCCEE------ETT-EEEEECTTSCEEEEETTTCCEEEEECC--CCEEEEEE--ET
T ss_pred cEEEEEecccCCCCcccccccccCCCcEE------ECC-EEEEEecCcEEEEEECCCCcEEeeccC--CCCCCceE--EC
Confidence 876554322110 000 0000100 001 355677899999999999999887653 23445544 35
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeEEEEec-CC-CEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 443 EYLASGSLDKSMHIWSLKEGKIVKTYTG-NG-GIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~-~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
..|..++.++.|..+|..+|+.+..... .. .+..+.. .+..|.+++.+|.|++||.
T Consensus 278 ~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~ 335 (376)
T 3q7m_A 278 NRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINV 335 (376)
T ss_dssp TEEEEEETTCCEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEET
T ss_pred CEEEEEcCCCeEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEEC
Confidence 6788888899999999999998877652 11 1222222 3568888888999999885
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=2.3e-07 Score=85.46 Aligned_cols=246 Identities=11% Similarity=0.006 Sum_probs=149.4
Q ss_pred EEEEEECCCcEEEEECCCcee------EeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeeecccCe
Q 010759 227 LLATGSYDGQARIWSTNGDLK------CTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEFHSGPT 299 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~------~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~~~~~~ 299 (502)
+|+.+.. +.|+.++.++... ..+......+.+++|++++..|+ +-...+.|..+++........+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 4677777765432 11211123467899999766554 55567899999987665433322211233
Q ss_pred EEEec--CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC---CCcEEEEeCCCCceeee
Q 010759 300 LDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD---DVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 300 ~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~---dg~i~iwd~~~~~~~~~ 374 (502)
..+.+ .....+++....+.|.+++...................++++|++..|+.+.. .+.|..+++..... ..
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~ 160 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RI 160 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EE
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EE
Confidence 44444 44566777777888999888654322222222245688999996555444443 46788888764322 22
Q ss_pred c-ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 375 L-REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 375 ~-~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
+ .........++++|++. .+.++-...+.|..+|+........+.+. .....|+.. .+.++++....+.
T Consensus 161 ~~~~~~~~P~gia~d~~~~--------~lyv~d~~~~~I~~~~~~g~~~~~~~~~~-~~P~gi~~d-~~~lyva~~~~~~ 230 (267)
T 1npe_A 161 LAQDNLGLPNGLTFDAFSS--------QLCWVDAGTHRAECLNPAQPGRRKVLEGL-QYPFAVTSY-GKNLYYTDWKTNS 230 (267)
T ss_dssp EECTTCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTEEEEEEEEECC-CSEEEEEEE-TTEEEEEETTTTE
T ss_pred EEECCCCCCcEEEEcCCCC--------EEEEEECCCCEEEEEecCCCceEEEecCC-CCceEEEEe-CCEEEEEECCCCe
Confidence 2 12234567889988754 24555666789999999754443333332 234567664 3444444445689
Q ss_pred EEEEeCCCCeeEEEEecCC--CEEEEEECCCCC
Q 010759 454 MHIWSLKEGKIVKTYTGNG--GIFEVCWNKEGD 484 (502)
Q Consensus 454 i~iw~~~~~~~~~~~~~~~--~i~~~~ws~~g~ 484 (502)
|.+++..+++.+.++.... ..+++++.|++.
T Consensus 231 v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 231 VIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred EEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 9999999999988875432 467888888875
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=99.09 E-value=1.6e-08 Score=96.31 Aligned_cols=218 Identities=14% Similarity=0.069 Sum_probs=142.6
Q ss_pred CCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEec
Q 010759 225 GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW 304 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 304 (502)
+..+..++.++.+..++..+........+...+.++...+++. ++.++.++.|..||.. ++....+......+..+..
T Consensus 107 ~~~l~v~t~~~~l~~~d~~g~~~~~~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTDGTEKWRFKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp TTEEEEECTTSEEEEECTTSCEEEEEECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred CCEEEEEecCCEEEEEcCCCCEEEEEcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 4556778888999999987655555554555556666666665 6667788999999998 7666555544444444444
Q ss_pred CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEE
Q 010759 305 RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 305 ~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
..+..+..++ +.++.++ ..+..+..+......+.++...++|.+. .++.++.+..++. ++..+..+......+..
T Consensus 185 d~~g~l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~-~g~~~~~~~~~~~~~~~ 259 (330)
T 3hxj_A 185 GKDGTIYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIY-VTSLDGHLYAINP-DGTEKWRFKTGKRIESS 259 (330)
T ss_dssp CTTCCEEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEE-EEETTTEEEEECT-TSCEEEEEECSSCCCSC
T ss_pred cCCCEEEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEE-EEcCCCeEEEECC-CCCEeEEeeCCCCcccc
Confidence 3333344444 7788888 5555555555455668888888887654 5667788888874 45444444333322233
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~ 461 (502)
+...+++ .|..++.+|.|..+|. +++.+..+......+.++...++|.+ ..|+.+|.+++.....
T Consensus 260 ~~~~~~g----------~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~l-~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 260 PVIGNTD----------TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGTI-YFGTRNGKFYALFNLE 324 (330)
T ss_dssp CEECTTS----------CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCCE-EEECTTSCEEEEEC--
T ss_pred ceEcCCC----------eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCEE-EEEcCCCeEEEEeccc
Confidence 3444344 2556778889999996 68877777655566778888788764 5588899999887653
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.09 E-value=7.5e-09 Score=99.61 Aligned_cols=243 Identities=8% Similarity=-0.064 Sum_probs=147.2
Q ss_pred cEEEEECCC-ceeEeecCCCCCEEEEEecCCCCEEEEec----------CCCeEEEEeccCcceeEEeeecc-------c
Q 010759 236 QARIWSTNG-DLKCTLSKHKGPIFSLKWNKKGDYLLTGS----------CDKTAIVWDVKTEEWKQQFEFHS-------G 297 (502)
Q Consensus 236 ~i~iw~~~~-~~~~~~~~h~~~V~~l~~~~~~~~l~sgs----------~D~~v~iwd~~~~~~~~~~~~~~-------~ 297 (502)
.|.+.|... +...++..-..+ .+.++|++.+++.+. .+++|.+||+.+++.+..+.... .
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~ 124 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGP 124 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSC
T ss_pred eEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCC
Confidence 788999764 445555544456 799999999888876 47899999999999988886541 1
Q ss_pred CeEEEecC--CCceEEEEcC-CCeEEE--EEcCCCcceeeecCCCcceeEEEEcCCC-CEEEEEeCCCcEEEEeCCC---
Q 010759 298 PTLDVDWR--NNVSFATSST-DNMIYV--CKIGENRPIKTFAGHQGEVNCVKWDPTG-SLLASCSDDVTAKIWNMKQ--- 368 (502)
Q Consensus 298 ~~~~~~~~--~~~~~~~~~~-d~~i~~--~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~sgs~dg~i~iwd~~~--- 368 (502)
....+.+. ....+++... ...+.+ +|..+ +..+.-- + |+.+.|++ ..+++.+.||.+.+.++.+
T Consensus 125 ~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~-~---~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~ 197 (368)
T 1mda_H 125 RVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSA-S---CFHIHPGAAATHYLGSCPASLAASDLAAAPA 197 (368)
T ss_dssp CTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECS-S---CCCCEEEETTEEECCCCTTSCEEEECCSSCC
T ss_pred CcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECC-C---ceEEccCCCeEEEEEcCCCCEEEEECccccc
Confidence 12223332 3333343322 455666 55544 2222210 0 11223444 3455667788888888876
Q ss_pred --Cceeee----cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeC-------CC---
Q 010759 369 --DKYVHD----LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNG-------HR--- 430 (502)
Q Consensus 369 --~~~~~~----~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~-------h~--- 430 (502)
++.+.. +.....+. . .+++. .++ ..+. +.|.+.|+.... .+..+.- +.
T Consensus 198 ~~~~v~~~~t~~i~vg~~P~---~-~~~~~--------~~~-~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p 263 (368)
T 1mda_H 198 AAGIVGAQCTGAQNCSSQAA---Q-ANYPG--------MLV-WAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRS 263 (368)
T ss_dssp CCEECCCCSCTTSCBCSCCE---E-ETTTT--------EEE-ECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEE
T ss_pred cCCeEEEEeeeeeeCCCCcc---c-cccCC--------EEE-EEcC-CEEEEEECCCCcceEEEEEEecccccccccccc
Confidence 332211 11112222 2 33332 223 3334 889999986532 2222210 00
Q ss_pred CCEEEEEECCCCCEEEEEeC---------CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCC-EEEEEE-CCCeEEEEE
Q 010759 431 EPVYSLAFSPTGEYLASGSL---------DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGD-KIAACF-ANHTVCVLD 499 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~---------Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~-~la~~~-~~~~v~v~~ 499 (502)
.....++|+|+++.|..+.. ++.+.++|+.+++.+.++.......+++|+|||+ .++++. .+++|.|+|
T Consensus 264 ~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 264 AGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred CcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 11122689999987775432 2356799999999998887655788999999998 556666 589999999
Q ss_pred ee
Q 010759 500 FR 501 (502)
Q Consensus 500 ~~ 501 (502)
+.
T Consensus 344 ~~ 345 (368)
T 1mda_H 344 AA 345 (368)
T ss_dssp SS
T ss_pred CC
Confidence 74
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.08 E-value=6e-08 Score=93.96 Aligned_cols=219 Identities=13% Similarity=0.170 Sum_probs=144.0
Q ss_pred CCCCEEE-EecCCCeEEEEeccCc----ceeEEee---e----cccCeEEEecCCCceEEEEcCC------CeEEEEEcC
Q 010759 264 KKGDYLL-TGSCDKTAIVWDVKTE----EWKQQFE---F----HSGPTLDVDWRNNVSFATSSTD------NMIYVCKIG 325 (502)
Q Consensus 264 ~~~~~l~-sgs~D~~v~iwd~~~~----~~~~~~~---~----~~~~~~~~~~~~~~~~~~~~~d------~~i~~~~~~ 325 (502)
+++++|+ +|-.+.+|.++|+.+. +.+.+++ . .......+....+..++++..+ +.+.+.|..
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTT
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECC
Confidence 6777654 6777889999998765 4555552 0 0111223333333355555444 789999999
Q ss_pred CCcceeeecCCC---cceeEEEEcCCCCEEEEEe-------------------CCCcEEEEeCCCCceeeecccC--CCc
Q 010759 326 ENRPIKTFAGHQ---GEVNCVKWDPTGSLLASCS-------------------DDVTAKIWNMKQDKYVHDLREH--SKE 381 (502)
Q Consensus 326 ~~~~~~~~~~h~---~~v~~v~~~p~~~~l~sgs-------------------~dg~i~iwd~~~~~~~~~~~~~--~~~ 381 (502)
+.+.+..+.... ..-..+.|+|+++.+++.. ...+|.+||+.+++.+.++... ...
T Consensus 173 T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~ 252 (462)
T 2ece_A 173 SFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRM 252 (462)
T ss_dssp TCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEE
T ss_pred CCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCc
Confidence 888887775222 2234588899999888884 3689999999988877776542 123
Q ss_pred EEEEEE--ccCCCCCCCCCCcEEEEEEe-----CCCeEEEEeCCCCeE--EEE--eeCC----------------CCCEE
Q 010759 382 IYTIRW--SPTGSGTNNPNQQLILASAS-----FDSTVKLWDVELGKL--LYS--LNGH----------------REPVY 434 (502)
Q Consensus 382 i~~~~~--sp~g~~~~~~~~~~~l~sgs-----~dg~i~iwd~~~~~~--~~~--~~~h----------------~~~v~ 434 (502)
...++| +|++. ...+++- .+++|.+|....++. ... +... .....
T Consensus 253 P~~i~f~~~Pdg~--------~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa 324 (462)
T 2ece_A 253 ALELRPLHDPTKL--------MGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVT 324 (462)
T ss_dssp EEEEEECSSTTCC--------EEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCC
T ss_pred cceeEeeECCCCC--------EEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCcee
Confidence 344555 78775 3444555 677888876655432 111 1110 13467
Q ss_pred EEEECCCCCEEEEEeC-CCcEEEEeCCC---CeeEEEEecCC---------------CEEEEEECCCCCEEEEEE
Q 010759 435 SLAFSPTGEYLASGSL-DKSMHIWSLKE---GKIVKTYTGNG---------------GIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 435 ~l~~spdg~~lasgs~-Dg~i~iw~~~~---~~~~~~~~~~~---------------~i~~~~ws~~g~~la~~~ 490 (502)
.|.+||||++|.++.. .+.|.+|++.+ .+++......+ ....++++|||++|.++.
T Consensus 325 ~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 325 DIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 8999999999977765 68999999853 35665554321 357899999999999887
No 237
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.08 E-value=3.6e-06 Score=90.37 Aligned_cols=310 Identities=9% Similarity=0.056 Sum_probs=194.7
Q ss_pred eeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCc
Q 010759 157 VCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 236 (502)
Q Consensus 157 V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~ 236 (502)
|.++...++|.+.+ |+.++-|..|+..++... .... ......|.++...++|.+.+ |+.++.
T Consensus 175 i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~--------------~~~~--~~~~~~i~~i~~d~~g~lwi-gt~~~G 236 (795)
T 4a2l_A 175 IASTLYRQGDQIYI-GTSTDGLYTYSITQKTFE--------------KVIP--ILGTKQIQAILQQSPTRIWV-ATEGAG 236 (795)
T ss_dssp CEEEEEEETTEEEE-EESSSCEEEEETTTCCEE--------------ECC------CCCEEEEEEEETTEEEE-EEBSSC
T ss_pred eEEEEECCCCCEEE-EECCCCEEEEeCCCCeEE--------------EecC--CCCCCeeEEEEEcCCCCEEE-EECCCC
Confidence 88888888887665 555555888886554311 0000 01234688888877777655 444445
Q ss_pred EEEEECCCceeEeecC--------CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee-------cccCeEE
Q 010759 237 ARIWSTNGDLKCTLSK--------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-------HSGPTLD 301 (502)
Q Consensus 237 i~iw~~~~~~~~~~~~--------h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-------~~~~~~~ 301 (502)
+.+|+........+.. ....|.++...++|...+. +.+ -|.+||..++.+...... ....+.+
T Consensus 237 l~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-t~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~ 314 (795)
T 4a2l_A 237 LFLINPKTKEIKNYLHSPSNPKSISSNYIRSLAMDSQNRLWIG-TFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRS 314 (795)
T ss_dssp EEEEETTTTEEEEECCCTTCTTSCSCSBEEEEEECTTSCEEEE-ESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEE
T ss_pred eEEEeCCCCeEEEeecCCCCccccCCCeEEEEEEcCCCCEEEE-eCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEE
Confidence 8888876544333321 1356999999888875544 444 588999887765432211 1234566
Q ss_pred EecCCCceEEEEcCCCeEEEEEcCCCcceeeecC-------CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 302 VDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG-------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 302 ~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~-------h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
+....+..+..++.++-|..++...... ..+.. ....|.++...++|.+. .|+.++-|..|+..++....-
T Consensus 315 i~~D~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~l~~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~ 392 (795)
T 4a2l_A 315 IFMDSQGGMWLGTYFGGLNYYHPIRNRF-KNIRNIPYKNSLSDNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSY 392 (795)
T ss_dssp EEECTTSCEEEEESSSCEEEECGGGGSS-EEECCCTTSSSCSCSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEE
T ss_pred EEEeCCcCEEEEECCCCeEEeCCCcccc-eEEcCCCCCCCCCCCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEE
Confidence 6555555566666666677776544321 12211 23468999998888755 577787899999877654332
Q ss_pred cc--------cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee----CCCCCEEEEEECCCC
Q 010759 375 LR--------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN----GHREPVYSLAFSPTG 442 (502)
Q Consensus 375 ~~--------~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~----~h~~~v~~l~~spdg 442 (502)
.. .....|.++...+++. +|-.|+.++-|.+||..+++...-.. .....|.++...++|
T Consensus 393 ~~~~~~~~~~l~~~~v~~i~~d~~g~---------~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g 463 (795)
T 4a2l_A 393 TLQEDESARGIGSNNIKAVYVDEKKS---------LVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEG 463 (795)
T ss_dssp CCC------CCSCSCEEEEEEETTTT---------EEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSS
T ss_pred ecCCCCcccCCCCccEEEEEEcCCCC---------EEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCC
Confidence 11 1235688888776663 24557777779999998776543221 124579999999988
Q ss_pred CEEEEEeCCCcEEEEeCCCCeeEEEEec-------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 443 EYLASGSLDKSMHIWSLKEGKIVKTYTG-------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 443 ~~lasgs~Dg~i~iw~~~~~~~~~~~~~-------~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+.+... + -|.+|+..+++....... ...|.++...++|+..++.. +.|.+||.+
T Consensus 464 ~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~ 525 (795)
T 4a2l_A 464 NLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQE 525 (795)
T ss_dssp CEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEE
T ss_pred CEEEEec-C-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCC
Confidence 8666544 4 488999887765432211 24589999999998666554 457777753
No 238
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.04 E-value=8.9e-06 Score=87.29 Aligned_cols=315 Identities=10% Similarity=0.056 Sum_probs=195.9
Q ss_pred ccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeee-cccccCCCCeEEEEECCCCCEEEEEE
Q 010759 154 TSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVK-GRTNEKSKDVTTLDWNGEGTLLATGS 232 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~V~~l~~s~~~~~l~sg~ 232 (502)
...|.++...++|.+.+. +.++-|.+|+..++... ...... .........|.++...++|.+.+ |+
T Consensus 214 ~~~i~~i~~d~~g~lwig-t~~~Gl~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt 280 (795)
T 4a2l_A 214 TKQIQAILQQSPTRIWVA-TEGAGLFLINPKTKEIK-----------NYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GT 280 (795)
T ss_dssp CCCEEEEEEEETTEEEEE-EBSSCEEEEETTTTEEE-----------EECCCTTCTTSCSCSBEEEEEECTTSCEEE-EE
T ss_pred CCeeEEEEEcCCCCEEEE-ECCCCeEEEeCCCCeEE-----------EeecCCCCccccCCCeEEEEEEcCCCCEEE-Ee
Confidence 456888888888776554 33434888886543210 000000 00011245699999998888665 44
Q ss_pred CCCcEEEEECCCceeEeecC--------CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee------cccC
Q 010759 233 YDGQARIWSTNGDLKCTLSK--------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF------HSGP 298 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~~~~~~--------h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~------~~~~ 298 (502)
.. -+.+|+........+.. ....|.++...++|. |..|+.++-|..|+..+..+...... ....
T Consensus 281 ~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~ 358 (795)
T 4a2l_A 281 FN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG-MWLGTYFGGLNYYHPIRNRFKNIRNIPYKNSLSDNV 358 (795)
T ss_dssp SS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-EEEEESSSCEEEECGGGGSSEEECCCTTSSSCSCSS
T ss_pred CC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-EEEEECCCCeEEeCCCcccceEEcCCCCCCCCCCCe
Confidence 44 58888876554433321 235799999988876 55566777889998876654322111 1234
Q ss_pred eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC--------CCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc
Q 010759 299 TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--------HQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~ 370 (502)
+.++....+..+..++.++-+..++............ ....|.++...++|.+|..|+.++-|.+||..+++
T Consensus 359 V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 359 VSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCC
T ss_pred eEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 5666555555566666666788887665432221111 13568899988888856667887789999988776
Q ss_pred eeeecc----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC------CCCCEEEEEECC
Q 010759 371 YVHDLR----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG------HREPVYSLAFSP 440 (502)
Q Consensus 371 ~~~~~~----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~------h~~~v~~l~~sp 440 (502)
...-.. .....|.++...++|. +++ |+.. -|.+||..+++....... ....|.++...+
T Consensus 439 ~~~~~~~~~~l~~~~v~~i~~d~~g~--------lwi--gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 439 VENFNQRNSQLVNENVYAILPDGEGN--------LWL--GTLS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEECTTTSCCSCSCEEEEEECSSSC--------EEE--EESS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred EEEeecCCCCcCCCeeEEEEECCCCC--------EEE--EecC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 433211 1345788888777664 233 4444 488899887765432211 235799999999
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCeeEEEEe--------cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 441 TGEYLASGSLDKSMHIWSLKEGKIVKTYT--------GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~~~~~~~~~~--------~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
+|.+.+... +-|..|+..+++. .+. ....|.++...++|++.++.. + .+..||.
T Consensus 508 ~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~-Gl~~~d~ 569 (795)
T 4a2l_A 508 HKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR-E-GFYCFNE 569 (795)
T ss_dssp TCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES-S-CEEEEET
T ss_pred CCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC-C-CceeECC
Confidence 998766554 4588899877765 332 123588999999998655443 4 4777763
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.98 E-value=7.9e-08 Score=100.75 Aligned_cols=269 Identities=12% Similarity=0.067 Sum_probs=167.8
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeecCCCC----------CE-EEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLSKHKG----------PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~~h~~----------~V-~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
+..++.++.++.|..+|.. ++.+..+..... .+ .++.+ .+..++.++.|+.|..+|..+++.+-.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 3456667777888888863 455444432211 00 11122 2467888999999999999999877665
Q ss_pred eeccc----CeE-EEecCCCceEEEEcC-----CCeEEEEEcCCCcceeeecCC--------------------------
Q 010759 293 EFHSG----PTL-DVDWRNNVSFATSST-----DNMIYVCKIGENRPIKTFAGH-------------------------- 336 (502)
Q Consensus 293 ~~~~~----~~~-~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~h-------------------------- 336 (502)
..... .+. ......+..++..+. ++.|+.+|..+++.+-.+...
T Consensus 144 ~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w 223 (668)
T 1kv9_A 144 QTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYW 223 (668)
T ss_dssp ECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHH
T ss_pred ccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCcccee
Confidence 54211 000 000113333333322 588999999888776554310
Q ss_pred -----CcceeEEEEcCCCCEEEEEeCCCc-------------------EEEEeCCCCceeeeccc--CC-------CcEE
Q 010759 337 -----QGEVNCVKWDPTGSLLASCSDDVT-------------------AKIWNMKQDKYVHDLRE--HS-------KEIY 383 (502)
Q Consensus 337 -----~~~v~~v~~~p~~~~l~sgs~dg~-------------------i~iwd~~~~~~~~~~~~--~~-------~~i~ 383 (502)
......+++.|...+++.++.++. |..+|..+++.+-.++. |. .+..
T Consensus 224 ~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~ 303 (668)
T 1kv9_A 224 KLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQIT 303 (668)
T ss_dssp HHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEE
T ss_pred eeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcE
Confidence 011124788888888888887763 89999999988765543 21 1222
Q ss_pred EEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC------------CCE------------------
Q 010759 384 TIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR------------EPV------------------ 433 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~------------~~v------------------ 433 (502)
...+..+|. ...+++.++.+|.++++|..+|+.+....... .++
T Consensus 304 ~~d~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 304 LAELNIDGK------PRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp EEEEEETTE------EEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred EEEeccCCc------EEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 222222331 01257889999999999999999885543211 001
Q ss_pred ------EEEEECCCCCEEEEE------------------------------------eCCCcEEEEeCCCCeeEEEEecC
Q 010759 434 ------YSLAFSPTGEYLASG------------------------------------SLDKSMHIWSLKEGKIVKTYTGN 471 (502)
Q Consensus 434 ------~~l~~spdg~~lasg------------------------------------s~Dg~i~iw~~~~~~~~~~~~~~ 471 (502)
..++|+|+...+... ..+|.|..||+.+|+.+..+...
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~ 457 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYP 457 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEES
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCC
Confidence 126778876654431 13488999999999998887654
Q ss_pred CCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 472 GGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 472 ~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.......+...|.++++++.++.|++||.+
T Consensus 458 ~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~ 487 (668)
T 1kv9_A 458 THWNGGTLSTAGNLVFQGTAAGQMHAYSAD 487 (668)
T ss_dssp SSCCCCEEEETTTEEEEECTTSEEEEEETT
T ss_pred CCCcCceeEeCCCEEEEECCcccchhhhhh
Confidence 444444556678899999999999999864
No 240
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.94 E-value=3.1e-07 Score=96.19 Aligned_cols=306 Identities=12% Similarity=0.162 Sum_probs=174.3
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccC-CCCe-EEEEECCCCCEEEEEECCCcEEEEECC
Q 010759 166 GSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEK-SKDV-TTLDWNGEGTLLATGSYDGQARIWSTN 243 (502)
Q Consensus 166 ~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V-~~l~~s~~~~~l~sg~~dg~i~iw~~~ 243 (502)
+..|+.++.++.|.-+|..+|+........ ......... ...+ ..+++ .+..++.++.|+.+..+|..
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~ 135 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPE--------VAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAK 135 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCC--------CCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETT
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCC--------CCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECC
Confidence 556777777888998998877643211100 000000000 0000 01112 24577888899999999974
Q ss_pred -CceeEeecCCC-CCEEEEEecC--CCCEEEEecC------CCeEEEEeccCcceeEEeeecc-cC--------------
Q 010759 244 -GDLKCTLSKHK-GPIFSLKWNK--KGDYLLTGSC------DKTAIVWDVKTEEWKQQFEFHS-GP-------------- 298 (502)
Q Consensus 244 -~~~~~~~~~h~-~~V~~l~~~~--~~~~l~sgs~------D~~v~iwd~~~~~~~~~~~~~~-~~-------------- 298 (502)
++.+..+.... .....+...| .+..++.++. ++.|..+|+.+++.+-.+.... .+
T Consensus 136 tG~~~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 215 (668)
T 1kv9_A 136 TGKAIWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAK 215 (668)
T ss_dssp TCCEEEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred CCCEeeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccc
Confidence 55555443311 0000111111 1345555543 5899999999999776664311 00
Q ss_pred ------------------eEEEecCCCceEEEEcCCC-------------------eEEEEEcCCCcceeeecC--CC--
Q 010759 299 ------------------TLDVDWRNNVSFATSSTDN-------------------MIYVCKIGENRPIKTFAG--HQ-- 337 (502)
Q Consensus 299 ------------------~~~~~~~~~~~~~~~~~d~-------------------~i~~~~~~~~~~~~~~~~--h~-- 337 (502)
...++...+ .+..+..++ .|+.+|..+++.+-.+.. |.
T Consensus 216 ~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~w 294 (668)
T 1kv9_A 216 TWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSW 294 (668)
T ss_dssp TCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCS
T ss_pred cCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccc
Confidence 011121223 333333333 488888888877655542 22
Q ss_pred -----cceeEEEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecccCC------------CcEE--------------
Q 010759 338 -----GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHS------------KEIY-------------- 383 (502)
Q Consensus 338 -----~~v~~v~~~p~~~---~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------------~~i~-------------- 383 (502)
.+.....+..+|+ .++.++.+|.+.++|..+++.+....... .++.
T Consensus 295 d~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~ 374 (668)
T 1kv9_A 295 DFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMW 374 (668)
T ss_dssp CCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEES
T ss_pred cccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEEC
Confidence 2233333344675 68899999999999999998874332211 0000
Q ss_pred ----------EEEEccCCCCCCCCCCcEEEE-----------------------------------EEeCCCeEEEEeCC
Q 010759 384 ----------TIRWSPTGSGTNNPNQQLILA-----------------------------------SASFDSTVKLWDVE 418 (502)
Q Consensus 384 ----------~~~~sp~g~~~~~~~~~~~l~-----------------------------------sgs~dg~i~iwd~~ 418 (502)
.++++|. ...+.+ ....+|.|..||+.
T Consensus 375 p~~~G~~~w~~~a~dp~--------~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~ 446 (668)
T 1kv9_A 375 PSPFGAHNWHSMSFNPG--------TGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPV 446 (668)
T ss_dssp SCTTCSSCSSCCEEETT--------TTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETT
T ss_pred CCCccccCCCcceECCC--------CCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCC
Confidence 0122222 112211 11245889999999
Q ss_pred CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EEEEECCCCC-EEEEEEC
Q 010759 419 LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FEVCWNKEGD-KIAACFA 491 (502)
Q Consensus 419 ~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~~~ws~~g~-~la~~~~ 491 (502)
+++.+++...+ .++....+...+.+++.|+.||.|+.||..+|+++..+.....+ .-+.+..+|+ +++.|+.
T Consensus 447 tG~~~W~~~~~-~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~~~~~~~p~~~~~~G~~yva~~~G 521 (668)
T 1kv9_A 447 KQKAAWKVPYP-THWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQSGIVAAPMTFELAGRQYVAIMAG 521 (668)
T ss_dssp TTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEEEEEC
T ss_pred CCcEEEEccCC-CCCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCCCCcccCceEEEECCEEEEEEEec
Confidence 99999887643 33333444556788999999999999999999999888654433 2345566776 6666654
No 241
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.93 E-value=2.5e-07 Score=84.16 Aligned_cols=193 Identities=10% Similarity=0.070 Sum_probs=137.2
Q ss_pred EEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 257 IFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
..++.|++++..+++.+. +++|.++|+.+++....+.....+ ...+.+..+..+++.-.++.+.++|..+.+.+..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i 102 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNF 102 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEE
Confidence 579999998644444433 689999999999988877643322 23455556777888888999999999988888777
Q ss_pred cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC-----CcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
..-... ...+++||+.++.+..+++|.++|..+.+.+..+.... .....+.|. ++. +.+....
T Consensus 103 ~~g~~~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~---------lyvn~~~ 170 (266)
T 2iwa_A 103 THQMKD--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE---------VWANIWQ 170 (266)
T ss_dssp ECCSSS--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETT
T ss_pred ECCCCC--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE---------EEEecCC
Confidence 522122 23355677766666678899999999988776654321 135566776 442 4455556
Q ss_pred CCeEEEEeCCCCeEEEEeeCC-------------CCCEEEEEECCCCC-EEEEEeCCCcEEEEeCCC
Q 010759 409 DSTVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGE-YLASGSLDKSMHIWSLKE 461 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~-~lasgs~Dg~i~iw~~~~ 461 (502)
++.|.+.|..+++.+..+.-. ....+.|+|+|+++ +++++...+.|.+.++..
T Consensus 171 ~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 171 TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 789999999999998887531 13468999999986 556676788888888754
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.88 E-value=7.1e-07 Score=91.56 Aligned_cols=267 Identities=11% Similarity=0.073 Sum_probs=159.5
Q ss_pred CEEEEEEC-CCcEEEEEC--CCceeEeecCCCC----------CE-EEEEecCCCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 226 TLLATGSY-DGQARIWST--NGDLKCTLSKHKG----------PI-FSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 226 ~~l~sg~~-dg~i~iw~~--~~~~~~~~~~h~~----------~V-~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
..++.++. ++.|..+|. .++.+..+..... .+ .++.. .+..++.++.|+.+..+|..+++.+-.
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~ 140 (571)
T 2ad6_A 63 DMMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAY--GAGQIVKKQANGHLLALDAKTGKINWE 140 (571)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEE--ECCEEEEEeCCCEEEEEECCCCCEEEE
Confidence 34445555 677777776 4454444321110 00 11122 356788888999999999999987665
Q ss_pred eeeccc----CeE-EEecCCCceEEEEcC-----CCeEEEEEcCCCcceeeecCCCc-----------------------
Q 010759 292 FEFHSG----PTL-DVDWRNNVSFATSST-----DNMIYVCKIGENRPIKTFAGHQG----------------------- 338 (502)
Q Consensus 292 ~~~~~~----~~~-~~~~~~~~~~~~~~~-----d~~i~~~~~~~~~~~~~~~~h~~----------------------- 338 (502)
+..... .+. .....++..++.+.. ++.|+.+|..+++.+-.+.....
T Consensus 141 ~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g 220 (571)
T 2ad6_A 141 VEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLG 220 (571)
T ss_dssp EECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHH
T ss_pred ecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccc
Confidence 543210 010 000123444444432 78999999988776544332110
Q ss_pred ---------------ceeEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCceeeecccC--C------
Q 010759 339 ---------------EVNCVKWDPTGSLLASCSDD----------------VTAKIWNMKQDKYVHDLREH--S------ 379 (502)
Q Consensus 339 ---------------~v~~v~~~p~~~~l~sgs~d----------------g~i~iwd~~~~~~~~~~~~~--~------ 379 (502)
....+++.+....++.++.+ +.|..+|..+++.+-.++.. .
T Consensus 221 ~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~ 300 (571)
T 2ad6_A 221 TKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAG 300 (571)
T ss_dssp HHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCC
T ss_pred cccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccccccc
Confidence 00235666766666666532 35889999998877554421 1
Q ss_pred --CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-------------CCE-----------
Q 010759 380 --KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-------------EPV----------- 433 (502)
Q Consensus 380 --~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-------------~~v----------- 433 (502)
.++. +...++|. ...+++.++.+|.+.++|..+|+.+....-.. .+|
T Consensus 301 ~~~p~l-~~~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~ 373 (571)
T 2ad6_A 301 VNQMVL-TDQPVNGK------MTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDH 373 (571)
T ss_dssp CCCCEE-EEEEETTE------EEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTC
T ss_pred CCCCEE-EecccCCc------EEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCC
Confidence 1111 11112331 00256678899999999999999988764221 122
Q ss_pred ---------------EEEEECCCCCEEEEEe-------------------------------------CCCcEEEEeCCC
Q 010759 434 ---------------YSLAFSPTGEYLASGS-------------------------------------LDKSMHIWSLKE 461 (502)
Q Consensus 434 ---------------~~l~~spdg~~lasgs-------------------------------------~Dg~i~iw~~~~ 461 (502)
..++|+|+..+|...+ .+|.|..||+.+
T Consensus 374 ~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~t 453 (571)
T 2ad6_A 374 KGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTT 453 (571)
T ss_dssp CEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTT
T ss_pred CceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCC
Confidence 2367888876665543 357899999999
Q ss_pred CeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 462 GKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 462 ~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|+.+..+.....+.+......+.++.+++.++.|++||.+
T Consensus 454 G~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 454 GKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred CCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECC
Confidence 9998887654443333334456778888999999999864
No 243
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.88 E-value=8.4e-07 Score=80.72 Aligned_cols=190 Identities=12% Similarity=0.080 Sum_probs=129.6
Q ss_pred eEEEecCC-CceEEEEcC--CCeEEEEEcCCCcceeeecCCC-cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee
Q 010759 299 TLDVDWRN-NVSFATSST--DNMIYVCKIGENRPIKTFAGHQ-GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD 374 (502)
Q Consensus 299 ~~~~~~~~-~~~~~~~~~--d~~i~~~~~~~~~~~~~~~~h~-~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~ 374 (502)
...+.+.+ ...+++++. ++.|.+.|..+++.+..+.-.. .....+++.. +.+.++.-.++.+.++|..+.+.+.+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g-~~lyv~t~~~~~v~viD~~t~~v~~~ 101 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLN-EKLYQVVWLKNIGFIYDRRTLSNIKN 101 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEET-TEEEEEETTCSEEEEEETTTTEEEEE
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeC-CEEEEEEecCCEEEEEECCCCcEEEE
Confidence 35666655 444555543 6899999999998877654211 2233555552 34455555688999999999988887
Q ss_pred cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--C---CCEEEEEECCCCCEEEEEe
Q 010759 375 LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--R---EPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 375 ~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~---~~v~~l~~spdg~~lasgs 449 (502)
+......-.. ++++|. .++++ ..++.|.++|..+.+.+..+.-. . ..++.+.|. +|...+...
T Consensus 102 i~~g~~~g~g--lt~Dg~--------~l~vs-~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~ 169 (266)
T 2iwa_A 102 FTHQMKDGWG--LATDGK--------ILYGS-DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW 169 (266)
T ss_dssp EECCSSSCCE--EEECSS--------SEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET
T ss_pred EECCCCCeEE--EEECCC--------EEEEE-CCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC
Confidence 7533122223 345553 23444 45789999999998887776521 1 236788888 776666666
Q ss_pred CCCcEEEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEEE-EEECCCeEEEEEee
Q 010759 450 LDKSMHIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKIA-ACFANHTVCVLDFR 501 (502)
Q Consensus 450 ~Dg~i~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~la-~~~~~~~v~v~~~~ 501 (502)
.++.|.+-|..+++++.++.-. ...++++|+|++++|. ++.....|++.++.
T Consensus 170 ~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~ 236 (266)
T 2iwa_A 170 QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLH 236 (266)
T ss_dssp TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEE
T ss_pred CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEe
Confidence 6889999999999998888532 2468999999997554 55567889888874
No 244
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.88 E-value=8.4e-07 Score=91.10 Aligned_cols=269 Identities=10% Similarity=0.026 Sum_probs=157.8
Q ss_pred CEEEEEEC-CCcEEEEEC--CCceeEeecCCCC-----------CEEEEEecCCCCE----EEEecCCCeEEEEeccCcc
Q 010759 226 TLLATGSY-DGQARIWST--NGDLKCTLSKHKG-----------PIFSLKWNKKGDY----LLTGSCDKTAIVWDVKTEE 287 (502)
Q Consensus 226 ~~l~sg~~-dg~i~iw~~--~~~~~~~~~~h~~-----------~V~~l~~~~~~~~----l~sgs~D~~v~iwd~~~~~ 287 (502)
..++.++. ++.|..+|. .++.+..+..... ...++.+.|.+.. ++.++.|+.|..+|..+++
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~ 142 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGE 142 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCC
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCC
Confidence 34555555 677777776 4454444322111 0122344343444 8889999999999999998
Q ss_pred eeEEeeeccc----CeE-EEecCCCceEEEEc-----CCCeEEEEEcCCCcceeeecCCCcc------------------
Q 010759 288 WKQQFEFHSG----PTL-DVDWRNNVSFATSS-----TDNMIYVCKIGENRPIKTFAGHQGE------------------ 339 (502)
Q Consensus 288 ~~~~~~~~~~----~~~-~~~~~~~~~~~~~~-----~d~~i~~~~~~~~~~~~~~~~h~~~------------------ 339 (502)
.+-....... .+. .....++..++.++ .++.|+.+|..+++.+-.+......
T Consensus 143 ~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~ 222 (599)
T 1w6s_A 143 TVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQ 222 (599)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccc
Confidence 7655443210 010 00112333333332 3789999998887765443321100
Q ss_pred -------------------e-eEEEEcCCCCEEEEEeCC----------------CcEEEEeCCCCceeeecccCC----
Q 010759 340 -------------------V-NCVKWDPTGSLLASCSDD----------------VTAKIWNMKQDKYVHDLREHS---- 379 (502)
Q Consensus 340 -------------------v-~~v~~~p~~~~l~sgs~d----------------g~i~iwd~~~~~~~~~~~~~~---- 379 (502)
+ ..+++.+...+|+.++.+ +.|..+|..+++.+-.++...
T Consensus 223 ~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d~w 302 (599)
T 1w6s_A 223 KGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHDEW 302 (599)
T ss_dssp TTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCccc
Confidence 0 134566777777777665 378899999998875554321
Q ss_pred ------CcEEEEEEc-cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-------------CCE------
Q 010759 380 ------KEIYTIRWS-PTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-------------EPV------ 433 (502)
Q Consensus 380 ------~~i~~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-------------~~v------ 433 (502)
.++. +... .+|. ...+++.++.+|.+.++|..+|+.+....-.. .+|
T Consensus 303 d~d~~~~p~l-~d~~~~~G~------~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~ 375 (599)
T 1w6s_A 303 DYAGVNVMML-SEQKDKDGK------ARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYG 375 (599)
T ss_dssp CCCCCCCCEE-EEEECTTSC------EEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGC
T ss_pred cccCCCccEE-EeccccCCc------EEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccC
Confidence 1111 1111 2231 01357778999999999999999987754211 111
Q ss_pred --------------------EEEEECCCCCEEEEE---------------------------------e------CCCcE
Q 010759 434 --------------------YSLAFSPTGEYLASG---------------------------------S------LDKSM 454 (502)
Q Consensus 434 --------------------~~l~~spdg~~lasg---------------------------------s------~Dg~i 454 (502)
..++|+|+..++.+. + .+|.|
T Consensus 376 ~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l 455 (599)
T 1w6s_A 376 TRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQI 455 (599)
T ss_dssp CCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEE
T ss_pred CCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeE
Confidence 235677766555432 1 35789
Q ss_pred EEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 455 HIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 455 ~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
..||+.+|+++..........+-.....|.++..++.|+.++.||.+
T Consensus 456 ~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~ 502 (599)
T 1w6s_A 456 KAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSD 502 (599)
T ss_dssp EEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETT
T ss_pred EEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECC
Confidence 99999999998877533222211123356777788889999888854
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.87 E-value=1.4e-06 Score=89.36 Aligned_cols=262 Identities=14% Similarity=0.155 Sum_probs=149.1
Q ss_pred CCEEEEEECCCcEEEEECC-CceeEeec--CCCCCEEEEEecC--CCCEEEEecC------CCeEEEEeccCcceeEEee
Q 010759 225 GTLLATGSYDGQARIWSTN-GDLKCTLS--KHKGPIFSLKWNK--KGDYLLTGSC------DKTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 225 ~~~l~sg~~dg~i~iw~~~-~~~~~~~~--~h~~~V~~l~~~~--~~~~l~sgs~------D~~v~iwd~~~~~~~~~~~ 293 (502)
+..++.++.|+.+..+|.. ++....+. .+... ..+.-+| .+..++.++. ++.|..+|+.+++.+-.+.
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~-~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVG-STLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGT-CBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCcc-ceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 4577788889999999974 55554432 11100 0011111 1345666654 7999999999998776554
Q ss_pred ecccC----------------------------------------eEEEecCCCceEEEEcC-----------C----Ce
Q 010759 294 FHSGP----------------------------------------TLDVDWRNNVSFATSST-----------D----NM 318 (502)
Q Consensus 294 ~~~~~----------------------------------------~~~~~~~~~~~~~~~~~-----------d----~~ 318 (502)
..... ...++...+..++..+. + +.
T Consensus 194 ~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~ 273 (571)
T 2ad6_A 194 ATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMT 273 (571)
T ss_dssp SSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTE
T ss_pred cCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEE
Confidence 32110 01122222333333321 2 35
Q ss_pred EEEEEcCCCcceeeecC--CC--------cceeEEEEcCCCC---EEEEEeCCCcEEEEeCCCCceeeecccCC------
Q 010759 319 IYVCKIGENRPIKTFAG--HQ--------GEVNCVKWDPTGS---LLASCSDDVTAKIWNMKQDKYVHDLREHS------ 379 (502)
Q Consensus 319 i~~~~~~~~~~~~~~~~--h~--------~~v~~v~~~p~~~---~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------ 379 (502)
|+.++..+++.+-.+.. |. .++ -+...++|+ .++.++.+|.+.++|..+++.+..+....
T Consensus 274 v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~ 352 (571)
T 2ad6_A 274 IWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFK 352 (571)
T ss_dssp EEEEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEEEecCCCcEEEEecCCCCcccccccCCCCE-EEecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccc
Confidence 88888888876655432 21 122 123335774 67788999999999999998875543221
Q ss_pred -------CcEE-----------EEEEccCCC-------CCCCCCCcEEEEEE----------------------------
Q 010759 380 -------KEIY-----------TIRWSPTGS-------GTNNPNQQLILASA---------------------------- 406 (502)
Q Consensus 380 -------~~i~-----------~~~~sp~g~-------~~~~~~~~~~l~sg---------------------------- 406 (502)
.++. ....+|... ...+|...++++..
T Consensus 353 ~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 432 (571)
T 2ad6_A 353 KVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMY 432 (571)
T ss_dssp EECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred cccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccceec
Confidence 1111 000111100 00111112222221
Q ss_pred --------eCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--EE
Q 010759 407 --------SFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--FE 476 (502)
Q Consensus 407 --------s~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~~ 476 (502)
..+|.|..||+.+++.++++... .++....+...+..++.++.||.|+.||.++|+++..+.....+ ..
T Consensus 433 ~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p 511 (571)
T 2ad6_A 433 PGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMPSGGIGSP 511 (571)
T ss_dssp ECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCC
T ss_pred cCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCCCCcEeee
Confidence 24589999999999999887632 22333223334567777999999999999999999888754433 23
Q ss_pred EEECCCCCEEEEE
Q 010759 477 VCWNKEGDKIAAC 489 (502)
Q Consensus 477 ~~ws~~g~~la~~ 489 (502)
+.+..+|+.++++
T Consensus 512 ~~~~~~G~~yv~~ 524 (571)
T 2ad6_A 512 MTYSFKGKQYIGS 524 (571)
T ss_dssp EEEEETTEEEEEE
T ss_pred EEEEECCEEEEEE
Confidence 4466788755544
No 246
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.85 E-value=1.5e-06 Score=82.42 Aligned_cols=236 Identities=12% Similarity=0.054 Sum_probs=141.2
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecC--------------------CCCCEEEEEecCCCCEEEEecCC
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK--------------------HKGPIFSLKWNKKGDYLLTGSCD 275 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~--------------------h~~~V~~l~~~~~~~~l~sgs~D 275 (502)
..+++|.++|++++++..++.|..|+..+.....+.. ....+.++++.++...|+.+...
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~ 100 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY 100 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC
Confidence 4567899999978888889999999877643333221 01347899999733455555455
Q ss_pred CeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEE
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLAS 354 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~s 354 (502)
+.|..+|..++.... +.... ... .....+.+++.+ +|.+.++
T Consensus 101 ~~i~~~d~~~g~~~~-~~~~~-----------------------------~~~-------~~~~p~~i~~d~~~G~l~v~ 143 (322)
T 2fp8_A 101 YHLSVVGSEGGHATQ-LATSV-----------------------------DGV-------PFKWLYAVTVDQRTGIVYFT 143 (322)
T ss_dssp TEEEEECTTCEECEE-EESEE-----------------------------TTE-------ECSCEEEEEECTTTCCEEEE
T ss_pred CCEEEEeCCCCEEEE-ecccC-----------------------------CCC-------cccccceEEEecCCCEEEEE
Confidence 568888876543211 10000 000 001244566666 6665554
Q ss_pred EeC-----------------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC
Q 010759 355 CSD-----------------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV 417 (502)
Q Consensus 355 gs~-----------------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~ 417 (502)
-.. ++.|..||..++....... .......++++|++. .+.++-+..+.|..|++
T Consensus 144 d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~-~~~~p~gia~~~dg~--------~lyv~d~~~~~I~~~~~ 214 (322)
T 2fp8_A 144 DVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK-ELHVPGGAEVSADSS--------FVLVAEFLSHQIVKYWL 214 (322)
T ss_dssp ESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE-EESCCCEEEECTTSS--------EEEEEEGGGTEEEEEES
T ss_pred CCcccccccccceehcccCCCceEEEEeCCCCEEEEecc-CCccCcceEECCCCC--------EEEEEeCCCCeEEEEEC
Confidence 322 3667778876554322111 112335688888874 24444456788999998
Q ss_pred CCC---eEEEEeeCCCCCEEEEEECCCCCEEEEEeC----------CCcEEEEeCCCCeeEEEEecC-----CCEEEEEE
Q 010759 418 ELG---KLLYSLNGHREPVYSLAFSPTGEYLASGSL----------DKSMHIWSLKEGKIVKTYTGN-----GGIFEVCW 479 (502)
Q Consensus 418 ~~~---~~~~~~~~h~~~v~~l~~spdg~~lasgs~----------Dg~i~iw~~~~~~~~~~~~~~-----~~i~~~~w 479 (502)
... ... .+....+ ...|++.++|.+.++... .+.|..++. +|+.+..+... ..+..+++
T Consensus 215 ~~~~~~~~~-~~~~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~ 291 (322)
T 2fp8_A 215 EGPKKGTAE-VLVKIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAGEHFEQIQE 291 (322)
T ss_dssp SSTTTTCEE-EEEECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTTSCCCEEEE
T ss_pred CCCcCCccc-eEEeCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCccccceEEEE
Confidence 742 211 1111223 688999999987777654 467888887 47777776542 23566666
Q ss_pred CCCCCEEEEEECCCeEEEEEee
Q 010759 480 NKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+|+..++...++.|.++++.
T Consensus 292 -~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 292 -HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp -ETTEEEEECSSCSEEEEEEC-
T ss_pred -eCCEEEEeecCCCceEEEecc
Confidence 466666666678889988764
No 247
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.83 E-value=8.6e-07 Score=79.72 Aligned_cols=180 Identities=13% Similarity=0.126 Sum_probs=127.4
Q ss_pred EEEEEecCCCCEEEEecCCC--eEEEEeccCcceeEEeeecccCe-EEEecCCCceEEEEcCCCeEEEEEcCCCcceeee
Q 010759 257 IFSLKWNKKGDYLLTGSCDK--TAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF 333 (502)
Q Consensus 257 V~~l~~~~~~~~l~sgs~D~--~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 333 (502)
..+|.|+ ++..+.+.+.+| +|+++|+.+++....+....... ..+...++..+++.-.++.++++|..+.+.+..+
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti 123 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF 123 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE
Confidence 4788898 565566666666 89999999999988876544332 2355566777788888999999999999888877
Q ss_pred cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccC--C---CcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 334 AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREH--S---KEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 334 ~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~--~---~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
.-.. .-..++ ++++.|+.+..+++|.++|..+.+.+..+... . ..+..+.|. +|. +.+..-.
T Consensus 124 ~~~~-eG~glt--~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~---------lyan~w~ 190 (262)
T 3nol_A 124 NYDG-EGWGLT--HNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGE---------IFANVWQ 190 (262)
T ss_dssp ECSS-CCCCEE--ECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETT
T ss_pred ECCC-CceEEe--cCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCE---------EEEEEcc
Confidence 6322 222333 56766666656788999999998877765432 1 223456665 442 4455556
Q ss_pred CCeEEEEeCCCCeEEEEeeCC------------CCCEEEEEECCCCCEEEEEeC
Q 010759 409 DSTVKLWDVELGKLLYSLNGH------------REPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 409 dg~i~iwd~~~~~~~~~~~~h------------~~~v~~l~~spdg~~lasgs~ 450 (502)
++.|.+.|..+++.+..+.-. ....+.|||+|+++.|...|.
T Consensus 191 ~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 889999999999998877532 134689999998877666553
No 248
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.83 E-value=5.2e-07 Score=87.43 Aligned_cols=183 Identities=15% Similarity=0.186 Sum_probs=125.8
Q ss_pred ceEEEEcCCCeEEEEEcCCC----cceeeec------C-CCcceeEEEEcCCCCEEEEEeCC------CcEEEEeCCCCc
Q 010759 308 VSFATSSTDNMIYVCKIGEN----RPIKTFA------G-HQGEVNCVKWDPTGSLLASCSDD------VTAKIWNMKQDK 370 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~----~~~~~~~------~-h~~~v~~v~~~p~~~~l~sgs~d------g~i~iwd~~~~~ 370 (502)
..++.+..++.|+++|+.+. +.++++. . ....-..+.+.|+| +++++..+ |.|.+.|..+.+
T Consensus 97 ~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~ 175 (462)
T 2ece_A 97 FLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFE 175 (462)
T ss_dssp EEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCC
T ss_pred EEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCe
Confidence 34567778899999998744 4444442 0 11134567788999 77776665 789999999999
Q ss_pred eeeecccCC---CcEEEEEEccCCCCCCCCCCcEEEEEEe-------------------CCCeEEEEeCCCCeEEEEeeC
Q 010759 371 YVHDLREHS---KEIYTIRWSPTGSGTNNPNQQLILASAS-------------------FDSTVKLWDVELGKLLYSLNG 428 (502)
Q Consensus 371 ~~~~~~~~~---~~i~~~~~sp~g~~~~~~~~~~~l~sgs-------------------~dg~i~iwd~~~~~~~~~~~~ 428 (502)
.+.++.... .--+.+.|+|++. ++++.. ....|.+||+.+++.+.++.-
T Consensus 176 v~~~~~~~~~~~~~~Yd~~~~p~~~---------~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~v 246 (462)
T 2ece_A 176 PLGKWEIDRGDQYLAYDFWWNLPNE---------VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTL 246 (462)
T ss_dssp EEEECCSBCTTCCCCCCEEEETTTT---------EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEES
T ss_pred EEEEEccCCCCccccceEEECCCCC---------EEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEec
Confidence 888775322 2245678888875 455553 368999999999988888764
Q ss_pred C-C-CCEEEEEE--CCCCCEEEEEe------CCCcEEEEeCCCCee--EEEE--ec-----------------CCCEEEE
Q 010759 429 H-R-EPVYSLAF--SPTGEYLASGS------LDKSMHIWSLKEGKI--VKTY--TG-----------------NGGIFEV 477 (502)
Q Consensus 429 h-~-~~v~~l~~--spdg~~lasgs------~Dg~i~iw~~~~~~~--~~~~--~~-----------------~~~i~~~ 477 (502)
- . .....|.| +|+|+++..++ .+++|.+|....|.. .+.+ .. .....++
T Consensus 247 g~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I 326 (462)
T 2ece_A 247 GEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDI 326 (462)
T ss_dssp CTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCE
T ss_pred CCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEE
Confidence 2 1 23445656 99999887666 567888877665532 2221 11 1336789
Q ss_pred EECCCCCEEEEEEC-CCeEEEEEe
Q 010759 478 CWNKEGDKIAACFA-NHTVCVLDF 500 (502)
Q Consensus 478 ~ws~~g~~la~~~~-~~~v~v~~~ 500 (502)
.+||||++|.++.. .+.|.|||+
T Consensus 327 ~lS~DGrfLYVSnrg~d~VavfdV 350 (462)
T 2ece_A 327 DISLDDKFLYLSLWGIGEVRQYDI 350 (462)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEC
T ss_pred EECCCCCEEEEEeCCCCEEEEEEe
Confidence 99999998776644 789999997
No 249
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=5.4e-05 Score=80.98 Aligned_cols=315 Identities=12% Similarity=0.105 Sum_probs=184.9
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeec-ccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..|.++...++|.+.+ |+.++-|..|+..++... ....... ........|.++...++|.+.+. +.
T Consensus 163 ~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~~~~-----------~~~~~~~~~~~l~~~~i~~i~~d~~g~lwig-t~ 229 (781)
T 3v9f_A 163 EQTWTATEAEDGKLYI-GHVEGGLSILSLNDKSVK-----------HFVHDPQNPNSLPGNDVRCIYKDTNGNIWIG-TS 229 (781)
T ss_dssp CCEEEEEEEETTEEEE-EETTTEEEEEETTTTEEE-----------EECC--------CCSSEEEEEECTTCCEEEE-ET
T ss_pred cceEEEEECCCCCEEE-EecCCCeEEEcCCCCceE-----------eeecCCCCcccCCCCceeEEEEcCCCCEEEE-eC
Confidence 4588888877777665 555545888886543210 0000000 00011356899998888876654 44
Q ss_pred CCcEEEEECCCceeEeec--------CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee------------
Q 010759 234 DGQARIWSTNGDLKCTLS--------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE------------ 293 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~--------~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~------------ 293 (502)
. -+.+|+........+. .....|.++...++|. |..|+..+-|.++|..+..+.....
T Consensus 230 ~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~ 307 (781)
T 3v9f_A 230 K-GLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNN 307 (781)
T ss_dssp T-EEEEEETTTTEEEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEETTCC---------CEEECBCSST
T ss_pred C-cHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCC
Confidence 4 6888987654333221 1235689998887775 4555554568889987765432211
Q ss_pred --ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec----------CCCcceeEEEEcCCCCEEEEEeCCCcE
Q 010759 294 --FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA----------GHQGEVNCVKWDPTGSLLASCSDDVTA 361 (502)
Q Consensus 294 --~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~~l~sgs~dg~i 361 (502)
.....+.++.......+-.+..++-|..++...... ..+. -....|.++...++|.+. .|+.++-|
T Consensus 308 ~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lW-igt~~~Gl 385 (781)
T 3v9f_A 308 YSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTF-HTWSYSPTQMNESSLSNKVVSSVCDDGQGKLW-IGTDGGGI 385 (781)
T ss_dssp TSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSC-EEEC----CCCSSCCSSSCEEEEEECTTSCEE-EEEBSSCE
T ss_pred CCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcc-eeeccCccccccCCCCCcceEEEEEcCCCCEE-EEeCCCcE
Confidence 112345555554444555555556667676554332 2221 023468899988887755 56666678
Q ss_pred EEEeCCCCceeeec---ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEE
Q 010759 362 KIWNMKQDKYVHDL---REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSL 436 (502)
Q Consensus 362 ~iwd~~~~~~~~~~---~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l 436 (502)
.+|+..++....-. ......|.++...+++. |-.|+.++-|..+|..+++...... .....|.++
T Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~----------lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i 455 (781)
T 3v9f_A 386 NVFENGKRVAIYNKENRELLSNSVLCSLKDSEGN----------LWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVF 455 (781)
T ss_dssp EEEETTEEEEECC-----CCCSBEEEEEECTTSC----------EEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEE
T ss_pred EEEECCCCeEEEccCCCCCCCcceEEEEECCCCC----------EEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEE
Confidence 88987655432211 12345688888776664 3346666678899988776433221 134579999
Q ss_pred EECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec------CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 437 AFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG------NGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 437 ~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~------~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
...++|.+.+. +. +-|..|+..+++....... ...|.+++..++|++.++...+| +..||
T Consensus 456 ~~d~~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l~~~~ 521 (781)
T 3v9f_A 456 YEDKNKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-VGIYT 521 (781)
T ss_dssp EECTTSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-EEEEC
T ss_pred EECCCCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-EEEEe
Confidence 99988876554 44 4588999887665433221 24588999999997665544344 66665
No 250
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.82 E-value=2.9e-06 Score=87.05 Aligned_cols=259 Identities=13% Similarity=0.146 Sum_probs=145.5
Q ss_pred EEEEECCCcEEEEECC-CceeEeecCCC----CCEEE-EEecCCCCEEEEec------CCCeEEEEeccCcceeEEeeec
Q 010759 228 LATGSYDGQARIWSTN-GDLKCTLSKHK----GPIFS-LKWNKKGDYLLTGS------CDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 228 l~sg~~dg~i~iw~~~-~~~~~~~~~h~----~~V~~-l~~~~~~~~l~sgs------~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
++.++.|+.+..+|.. ++.+....... ..+++ -.. .+..++.++ .++.|+.+|+.+++.+-.+...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v--~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYV--VKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE--ETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEE--ECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 7788889999999964 55544432111 01111 001 123566655 3899999999999877655432
Q ss_pred ccC----------------------------------------eEEEecCCCceEEEEcC---------------CCeEE
Q 010759 296 SGP----------------------------------------TLDVDWRNNVSFATSST---------------DNMIY 320 (502)
Q Consensus 296 ~~~----------------------------------------~~~~~~~~~~~~~~~~~---------------d~~i~ 320 (502)
... ...++...+..++..+. ...|+
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 111 01122223333433332 14788
Q ss_pred EEEcCCCcceeeecC--CC--------cceeEEEEc-CCC---CEEEEEeCCCcEEEEeCCCCceeeecccCC-------
Q 010759 321 VCKIGENRPIKTFAG--HQ--------GEVNCVKWD-PTG---SLLASCSDDVTAKIWNMKQDKYVHDLREHS------- 379 (502)
Q Consensus 321 ~~~~~~~~~~~~~~~--h~--------~~v~~v~~~-p~~---~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~------- 379 (502)
.++..+++.+-.+.. |. .++ -+... .+| +.++.++.+|.+.++|..+++.+.......
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~-l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~ 360 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMM-LSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKS 360 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCE-EEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccE-EEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccc
Confidence 889888877655442 21 112 12332 567 567889999999999999998875443211
Q ss_pred ------CcEE--------------------------EEEEccCCCCCC----------------CCCCcEE------EEE
Q 010759 380 ------KEIY--------------------------TIRWSPTGSGTN----------------NPNQQLI------LAS 405 (502)
Q Consensus 380 ------~~i~--------------------------~~~~sp~g~~~~----------------~~~~~~~------l~s 405 (502)
.++. .++++|+..... ......+ +..
T Consensus 361 ~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~ 440 (599)
T 1w6s_A 361 VDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYP 440 (599)
T ss_dssp ECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEE
T ss_pred cccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceecc
Confidence 1110 112222211000 0000000 111
Q ss_pred --Ee------CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCE--E
Q 010759 406 --AS------FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGI--F 475 (502)
Q Consensus 406 --gs------~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i--~ 475 (502)
.+ ..|.|..||+.+++.+++... ..++..-.....+.+++.++.||.|+.||.++|+++..+....++ .
T Consensus 441 ~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~~g~~~~ 519 (599)
T 1w6s_A 441 GPKGDRQNYEGLGQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIPSGAIGY 519 (599)
T ss_dssp CTTSBTTTTBCCEEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSC
T ss_pred CCcCCcccCCCcCeEEEEECCCCCEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCCCCcEec
Confidence 01 458899999999999988752 122221112224667778999999999999999999888654332 2
Q ss_pred EEEECCCCC-EEEEEE
Q 010759 476 EVCWNKEGD-KIAACF 490 (502)
Q Consensus 476 ~~~ws~~g~-~la~~~ 490 (502)
-+.|..+|+ ++++..
T Consensus 520 P~~y~~~G~qyv~~~~ 535 (599)
T 1w6s_A 520 PMTYTHKGTQYVAIYY 535 (599)
T ss_dssp CEEEEETTEEEEEEEE
T ss_pred cEEEEeCCEEEEEEEc
Confidence 356677887 444443
No 251
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.82 E-value=6.9e-07 Score=89.63 Aligned_cols=238 Identities=14% Similarity=0.112 Sum_probs=150.0
Q ss_pred CCCEEEEEECC-CcEEEEECCCce-eE--eecCCCCCEEEEEe-c-CCCCEEEEec------------------CCCeEE
Q 010759 224 EGTLLATGSYD-GQARIWSTNGDL-KC--TLSKHKGPIFSLKW-N-KKGDYLLTGS------------------CDKTAI 279 (502)
Q Consensus 224 ~~~~l~sg~~d-g~i~iw~~~~~~-~~--~~~~h~~~V~~l~~-~-~~~~~l~sgs------------------~D~~v~ 279 (502)
||++++....+ +.|.+-|+.... .. .+.. .....++++ + |++.++++++ .++.+.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~-g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPN-AKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSS-CCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCC-CCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 88888877664 468888987643 22 2222 234688887 5 9999998884 346889
Q ss_pred EEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCCCe--------------EEEEEcCCCcceeeecCCCcceeEEE
Q 010759 280 VWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTDNM--------------IYVCKIGENRPIKTFAGHQGEVNCVK 344 (502)
Q Consensus 280 iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~--------------i~~~~~~~~~~~~~~~~h~~~v~~v~ 344 (502)
+.|..+++...++.....+ -..++......|+++..... +.+.+.... ..
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~---------------~~ 243 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEI---------------EK 243 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHH---------------HH
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccce---------------eE
Confidence 9999998877776543222 22333333344444433221 222211000 01
Q ss_pred EcCCCCEEEEEeCCCcEEEEeCCC--Cce-eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe
Q 010759 345 WDPTGSLLASCSDDVTAKIWNMKQ--DKY-VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK 421 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg~i~iwd~~~--~~~-~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~ 421 (502)
+.++|++... +.|.+.|..+ ++. +..+.. .....++.++|+|. ++++++..+.+|.++|+.+.+
T Consensus 244 ~v~~Gk~~~i----~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk--------~v~V~~~~s~~VsVid~~~~~ 310 (595)
T 1fwx_A 244 AIAAGDYQEL----NGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKK--------HLCVAGKLSPTVTVLDVTRFD 310 (595)
T ss_dssp HHHHTCSEEE----TTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSS--------EEEEECTTSSBEEEEEGGGHH
T ss_pred eccCCCeeEE----CcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCC--------EEEEeCCCCCeEEEEECcccc
Confidence 2345654433 5599999987 444 333332 23456788899886 577778889999999998653
Q ss_pred ------------EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCC----------CeeEEEEecCCCEEEE--
Q 010759 422 ------------LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKE----------GKIVKTYTGNGGIFEV-- 477 (502)
Q Consensus 422 ------------~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~----------~~~~~~~~~~~~i~~~-- 477 (502)
.+..+.- ......++|+|+|...++.-.|+.|.+|++.+ ...+..+.-+...-..
T Consensus 311 ~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~ 389 (595)
T 1fwx_A 311 AVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKT 389 (595)
T ss_dssp HHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEE
T ss_pred cccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeeccccccccee
Confidence 3444432 24468899999994445666799999999977 5567776655444223
Q ss_pred ----EECCCCCEEEEEEC
Q 010759 478 ----CWNKEGDKIAACFA 491 (502)
Q Consensus 478 ----~ws~~g~~la~~~~ 491 (502)
..+|||++|.++-.
T Consensus 390 ~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 390 VMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TTTTSTTCCSSEEEEEES
T ss_pred ccceEeCCCCCEEEEcCC
Confidence 45899999987743
No 252
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.82 E-value=6.6e-05 Score=80.30 Aligned_cols=314 Identities=10% Similarity=0.027 Sum_probs=186.9
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeec-ccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKG-RTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
..|.++...++|.+.+.. .. -+.+|+..++..... ..... ........|.++...++|.+.+ |+.
T Consensus 211 ~~i~~i~~d~~g~lwigt-~~-Gl~~~d~~~~~~~~~-----------~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~ 276 (781)
T 3v9f_A 211 NDVRCIYKDTNGNIWIGT-SK-GLALFNANTETFTNF-----------HNNPGNIHGALSSYIFSIKQLKDNKLWI-ATE 276 (781)
T ss_dssp SSEEEEEECTTCCEEEEE-TT-EEEEEETTTTEEEC----------------------CCCCEEEEEECTTSEEEE-EES
T ss_pred CceeEEEEcCCCCEEEEe-CC-cHheECCCCCcEEEE-----------EcCCCccccccCceEEEEEECCCCCEEE-EeC
Confidence 468899988888866643 34 588888654421100 00000 0011245699999888887554 566
Q ss_pred CCcEEEEECCCceeEeec---------------CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEee-----
Q 010759 234 DGQARIWSTNGDLKCTLS---------------KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFE----- 293 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~---------------~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~----- 293 (502)
.+-|.+++........+. -....|.++...++|. |-.|+.++-|..|+..+..+.....
T Consensus 277 ~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~ 355 (781)
T 3v9f_A 277 LNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQM 355 (781)
T ss_dssp SSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC----CC
T ss_pred CCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcccc
Confidence 466788887654322111 1245789998888876 5566667778889887665433211
Q ss_pred ----ecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeee----cCCCcceeEEEEcCCCCEEEEEeCCCcEEEEe
Q 010759 294 ----FHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTF----AGHQGEVNCVKWDPTGSLLASCSDDVTAKIWN 365 (502)
Q Consensus 294 ----~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~----~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd 365 (502)
.....+.++....+..+..++.++-+..++...... ..+ ......|.++...++|.+.+ |+.++.+..++
T Consensus 356 ~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~ 433 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFENGKRVA-IYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYN 433 (781)
T ss_dssp CSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEETTEEEE-ECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEEC
T ss_pred ccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEECCCCeE-EEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEc
Confidence 112345566555444555555555677777654321 111 12235688998888887654 67767788998
Q ss_pred CCCCceeeecc--cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC-----CCCEEEEEE
Q 010759 366 MKQDKYVHDLR--EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH-----REPVYSLAF 438 (502)
Q Consensus 366 ~~~~~~~~~~~--~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h-----~~~v~~l~~ 438 (502)
..+++...-.. .....|.++...+++. |-.|+. +-|..||..+++........ ...|.+|..
T Consensus 434 ~~~~~~~~~~~~~~~~~~v~~i~~d~~g~----------lwigt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~ 502 (781)
T 3v9f_A 434 TRLKKFQIIELEKNELLDVRVFYEDKNKK----------IWIGTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQ 502 (781)
T ss_dssp SSSCEEEECCSTTTCCCCEEEEEECTTSE----------EEEEET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEE
T ss_pred CCCCcEEEeccCCCCCCeEEEEEECCCCC----------EEEEEC-CceEEEeCCCCeEEecccCcccccccceeEEEEE
Confidence 87765433211 1345788888777663 333445 45888998776543322211 357999999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-----CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-----NGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-----~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.++|.+.+.....| |..|+..+++.. .+.. ...|.++...++|++.++. .+|-|..||
T Consensus 503 d~~g~lWigt~~~G-l~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g~lWi~T-~~Glv~~~d 565 (781)
T 3v9f_A 503 DSEGRFWIGTFGGG-VGIYTPDMQLVR-KFNQYEGFCSNTINQIYRSSKGQMWLAT-GEGLVCFPS 565 (781)
T ss_dssp CTTCCEEEEESSSC-EEEECTTCCEEE-EECTTTTCSCSCEEEEEECTTSCEEEEE-TTEEEEESC
T ss_pred cCCCCEEEEEcCCC-EEEEeCCCCeEE-EccCCCCCCCCeeEEEEECCCCCEEEEE-CCCceEEEC
Confidence 99998766443344 777888766543 3321 2358899999999865544 355436665
No 253
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.79 E-value=7.2e-07 Score=89.53 Aligned_cols=183 Identities=9% Similarity=0.070 Sum_probs=125.1
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecC-CCcceeEEEE-c-CCCCEEEEEe------------------CCCcEEEEeC
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAG-HQGEVNCVKW-D-PTGSLLASCS------------------DDVTAKIWNM 366 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~-h~~~v~~v~~-~-p~~~~l~sgs------------------~dg~i~iwd~ 366 (502)
..|+....+..|.+.|+...+..+.+.- ....+..+++ + |+++++++++ .++.+.+.|.
T Consensus 103 ~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~ 182 (595)
T 1fwx_A 103 FLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDA 182 (595)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEET
T ss_pred EEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEEC
Confidence 3466667788899999988887664431 1234778887 5 9999998885 2457889999
Q ss_pred CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-------------------------------------
Q 010759 367 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD------------------------------------- 409 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d------------------------------------- 409 (502)
.+.+.+.++.... ....++.+|+|. ++++.+.+
T Consensus 183 ~t~~v~~qI~Vgg-~pd~~~~spdGk---------~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 183 DKWEVAWQVLVSG-NLDNCDADYEGK---------WAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp TTTEEEEEEEESS-CCCCEEECSSSS---------EEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CCCeEEEEEEeCC-CccceEECCCCC---------EEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 9888776655322 234556777765 23333322
Q ss_pred -CeEEEEeCCC--CeE-EEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCCCe------------eEEEEecCC
Q 010759 410 -STVKLWDVEL--GKL-LYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKEGK------------IVKTYTGNG 472 (502)
Q Consensus 410 -g~i~iwd~~~--~~~-~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~~~------------~~~~~~~~~ 472 (502)
+.|.+.|.++ ++. +..+.. .....++.++|||+++++++ .+.+|.++|+.+.+ ++.......
T Consensus 253 i~~V~VID~~~~~~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~ 331 (595)
T 1fwx_A 253 LNGVKVVDGRKEASSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL 331 (595)
T ss_dssp ETTEEEEECSGGGCCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS
T ss_pred ECcEEEEeCcccCCceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC
Confidence 2477777776 444 334431 12346799999999876655 57899999998653 344444445
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 473 GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+...++|+|+|....+...+++|.+||+.
T Consensus 332 gP~h~aF~~dG~aY~t~~ldsqV~kwdi~ 360 (595)
T 1fwx_A 332 GPLHTAFDGRGNAYTSLFLDSQVVKWNIE 360 (595)
T ss_dssp CEEEEEECTTSEEEEEETTTTEEEEEEHH
T ss_pred CcceEEECCCCeEEEEEecCCcEEEEEhh
Confidence 68999999999555677889999999963
No 254
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.78 E-value=7.1e-06 Score=77.72 Aligned_cols=265 Identities=9% Similarity=0.032 Sum_probs=137.4
Q ss_pred ccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEe-ee------c----ccccCCCCeEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKH-VK------G----RTNEKSKDVTT 218 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~-~~------~----~~~~~~~~V~~ 218 (502)
+.+.-....+++|+++|++++++..++.|..|+..++.. ....... .. + ........+..
T Consensus 14 ~~g~~~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~g 84 (322)
T 2fp8_A 14 IEAPSYAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGF---------VDFAYASPYWNKAFCENSTDAEKRPLCGRTYD 84 (322)
T ss_dssp EECSSSCCCCEECCTTCSSEEEECTTSEEEEECCTTTCE---------EEEEESCTTCCHHHHTTCCCGGGHHHHCCEEE
T ss_pred cCCccCCceEEEEcCCCCEEEEEcCCCeEEEECCCCCce---------EEEecccccccccccccccchhccccCCCCce
Confidence 334334467889999999888888899999998754321 0000000 00 0 00001134788
Q ss_pred EEECC-CCCEEEEEECCCcEEEEECCCceeEeecCC-----CCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEE
Q 010759 219 LDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKH-----KGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 219 l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h-----~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~ 291 (502)
+++.+ ++++ +.+...+.+..++..+.....+... ......+++.+ +|+..++-.... +.... ..
T Consensus 85 i~~~~~~g~l-~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~----~~~~~--~~-- 155 (322)
T 2fp8_A 85 ISYNLQNNQL-YIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTL----YDDRG--VQ-- 155 (322)
T ss_dssp EEEETTTTEE-EEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSS----CCTTC--HH--
T ss_pred EEEcCCCCcE-EEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCccc----ccccc--cc--
Confidence 99997 6654 4454455588888765433322211 12356677777 666555432210 00000 00
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEE-EEEeCCCcEEEEeCCCCc
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLL-ASCSDDVTAKIWNMKQDK 370 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l-~sgs~dg~i~iwd~~~~~ 370 (502)
..++.....+.|+.++....... .+...-...+.++++|+|+.| ++-+..+.|.+|++....
T Consensus 156 ----------------~~~~~~~~~g~v~~~d~~~~~~~-~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~ 218 (322)
T 2fp8_A 156 ----------------QIMDTSDKTGRLIKYDPSTKETT-LLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPK 218 (322)
T ss_dssp ----------------HHHHHTCCCEEEEEEETTTTEEE-EEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTT
T ss_pred ----------------eehcccCCCceEEEEeCCCCEEE-EeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCc
Confidence 00000001122333333222111 111111234679999999855 444667889999987421
Q ss_pred --eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe---------CCCeEEEEeCCCCeEEEEeeCC----CCCEEE
Q 010759 371 --YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS---------FDSTVKLWDVELGKLLYSLNGH----REPVYS 435 (502)
Q Consensus 371 --~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs---------~dg~i~iwd~~~~~~~~~~~~h----~~~v~~ 435 (502)
....+....+ ...+++.++|. ++++... ..+.|..+|.. ++.+..+... ...+++
T Consensus 219 ~~~~~~~~~~~g-P~gi~~d~~G~--------l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~ 288 (322)
T 2fp8_A 219 KGTAEVLVKIPN-PGNIKRNADGH--------FWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQ 288 (322)
T ss_dssp TTCEEEEEECSS-EEEEEECTTSC--------EEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCE
T ss_pred CCccceEEeCCC-CCCeEECCCCC--------EEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceE
Confidence 1111111122 56778877774 3444433 14668888874 7766666433 234667
Q ss_pred EEECCCCCEEEEEeCCCcEEEEeCC
Q 010759 436 LAFSPTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 436 l~~spdg~~lasgs~Dg~i~iw~~~ 460 (502)
+++ .+++++++....+.|.++++.
T Consensus 289 ~~~-~~g~L~v~~~~~~~i~~~~~~ 312 (322)
T 2fp8_A 289 IQE-HDGLLYIGTLFHGSVGILVYD 312 (322)
T ss_dssp EEE-ETTEEEEECSSCSEEEEEEC-
T ss_pred EEE-eCCEEEEeecCCCceEEEecc
Confidence 777 456666666677888888875
No 255
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.78 E-value=1.8e-05 Score=72.59 Aligned_cols=222 Identities=11% Similarity=0.034 Sum_probs=132.0
Q ss_pred EEEEecCCCeEEEEeccCccee-----EEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcce
Q 010759 268 YLLTGSCDKTAIVWDVKTEEWK-----QQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEV 340 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v 340 (502)
+|+.+.. +.|+.+++...... ..+......+..+.+ ..+..+++....+.|++++.........+.......
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p 81 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSP 81 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCE
T ss_pred EEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCc
Confidence 4444443 47888887654321 112111122344544 345667777778899999987655433333333467
Q ss_pred eEEEEcCCCC-EEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC--CCeEEEEeC
Q 010759 341 NCVKWDPTGS-LLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF--DSTVKLWDV 417 (502)
Q Consensus 341 ~~v~~~p~~~-~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~--dg~i~iwd~ 417 (502)
..++++|++. ++++....+.|.++++..................++++|++. .+.++... .+.|..+++
T Consensus 82 ~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g--------~lyv~~~~~~~~~I~~~~~ 153 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRG--------NLYWTDWNRDNPKIETSHM 153 (267)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTT--------EEEEEECCSSSCEEEEEET
T ss_pred cEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCC--------EEEEEECCCCCcEEEEEec
Confidence 8999999754 555556678899999865432211222224567889988543 13333332 468888887
Q ss_pred CCCeEEEEe-eCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010759 418 ELGKLLYSL-NGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 418 ~~~~~~~~~-~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
.... ...+ .......+.++++|++..| ++-...+.|.+++.................+++.. .+..+++...++.|
T Consensus 154 dg~~-~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d-~~~lyva~~~~~~v 231 (267)
T 1npe_A 154 DGTN-RRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSY-GKNLYYTDWKTNSV 231 (267)
T ss_dssp TSCC-CEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEE-TTEEEEEETTTTEE
T ss_pred CCCC-cEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEe-CCEEEEEECCCCeE
Confidence 6322 2222 2223457899999987665 45556689999999765544444443445677764 34455555567889
Q ss_pred EEEEe
Q 010759 496 CVLDF 500 (502)
Q Consensus 496 ~v~~~ 500 (502)
.++|.
T Consensus 232 ~~~d~ 236 (267)
T 1npe_A 232 IAMDL 236 (267)
T ss_dssp EEEET
T ss_pred EEEeC
Confidence 88875
No 256
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.77 E-value=4.4e-05 Score=78.35 Aligned_cols=82 Identities=18% Similarity=0.440 Sum_probs=58.8
Q ss_pred CCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecCCCEE--EEEECCCCC-
Q 010759 408 FDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGNGGIF--EVCWNKEGD- 484 (502)
Q Consensus 408 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~~~i~--~~~ws~~g~- 484 (502)
.+|.|..||+.+++.+++..... ++..-.....+.+++.|+.||.|+.||.++|+++..+....++. -+.|..+|+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~q 542 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQ 542 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEE
T ss_pred CcceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCEE
Confidence 36889999999999998876332 22221112236678889999999999999999999987655543 367778897
Q ss_pred EEEEEE
Q 010759 485 KIAACF 490 (502)
Q Consensus 485 ~la~~~ 490 (502)
++++.+
T Consensus 543 Yv~~~~ 548 (582)
T 1flg_A 543 YLGVTV 548 (582)
T ss_dssp EEEEEE
T ss_pred EEEEEc
Confidence 444443
No 257
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.76 E-value=1.7e-05 Score=74.58 Aligned_cols=226 Identities=12% Similarity=0.062 Sum_probs=133.6
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC--CeEEEEeccCcceeEE
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D--~~v~iwd~~~~~~~~~ 291 (502)
.....++|+++|+++++-..++.|..|+..+.....+. ....+.++++.++++.+++.... ..|..+|..+++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~ 110 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL 110 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE
Confidence 34678999999997777778899999998776543332 23467899999999866554332 2466667666653221
Q ss_pred eeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce
Q 010759 292 FEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY 371 (502)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~ 371 (502)
.... .......++..+.+..+++-..++.|.++|...+..
T Consensus 111 ~~~~----------------------------------------~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~ 150 (306)
T 2p4o_A 111 LTLP----------------------------------------DAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSG 150 (306)
T ss_dssp EECT----------------------------------------TCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEE
T ss_pred EeCC----------------------------------------CccccCcccccCCCcEEEEECCCCeEEEEeCCCCcE
Confidence 1100 001112233334444444444566777777654321
Q ss_pred -ee---------ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-CeE--EEEeeCCCCCEEEEEE
Q 010759 372 -VH---------DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL-GKL--LYSLNGHREPVYSLAF 438 (502)
Q Consensus 372 -~~---------~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~ 438 (502)
+. ...........+ +|++. .+.++-+..+.|..+++.. ++. ...+... .....|++
T Consensus 151 ~v~~~~~~~~~~~~~~~~~~pngi--s~dg~--------~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~-~~P~gi~v 219 (306)
T 2p4o_A 151 SIWLEHPMLARSNSESVFPAANGL--KRFGN--------FLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQ-TNIDDFAF 219 (306)
T ss_dssp EEEEECGGGSCSSTTCCSCSEEEE--EEETT--------EEEEEETTTTEEEEEEBCTTSCBCCCEEEEES-CCCSSEEE
T ss_pred eEEEECCccccccccCCCCcCCCc--CcCCC--------EEEEEeCCCCEEEEEEeCCCCCCCccEEEecc-CCCCCeEE
Confidence 11 000011123334 55543 3556666788999999864 321 1111111 23466899
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEE--EEec-CCCEEEEEEC---CCCCEEEEEECC
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVK--TYTG-NGGIFEVCWN---KEGDKIAACFAN 492 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~--~~~~-~~~i~~~~ws---~~g~~la~~~~~ 492 (502)
+++|+++++....+.|.+++.. |++.. .+.. -....+++|. |+++.|..+...
T Consensus 220 d~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 220 DVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp BTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred CCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 9999988887778899999975 66533 2332 2458999999 898877766543
No 258
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.70 E-value=9.3e-05 Score=70.16 Aligned_cols=265 Identities=11% Similarity=0.071 Sum_probs=142.1
Q ss_pred CCeEEEEECCCCCEEEEEECCCcEEEEECCCcee-Ee--e--cCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc-c
Q 010759 214 KDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLK-CT--L--SKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE-E 287 (502)
Q Consensus 214 ~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~-~~--~--~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~-~ 287 (502)
..+.++.|.+++..+++ +..|.| +...++... .. + ......+.+|.|.+ + .++.++.++.|..-. ..+ .
T Consensus 36 ~~~~~v~~~~~~~~~~~-G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~-~~~~~g~~g~i~~S~-DgG~t 110 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWLV-GVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-N-EGWIVGEPPIMLHTT-DGGQS 110 (327)
T ss_dssp SCEEEEEESSSSCEEEE-ETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-T-EEEEEEETTEEEEES-STTSS
T ss_pred CcEEEEEECCCCcEEEE-cCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-C-eEEEEECCCeEEEEC-CCCCC
Confidence 46889999888877774 556765 333443211 11 1 11244688999986 3 344455667655432 222 2
Q ss_pred eeEEeee--cccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcc-eeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEE
Q 010759 288 WKQQFEF--HSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRP-IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIW 364 (502)
Q Consensus 288 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iw 364 (502)
|...... ..+.+..+.+..+..+...+.++.|+.- .+.++. .....++...+..+.+.|++.+++.+...+..+-+
T Consensus 111 W~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~ 189 (327)
T 2xbg_A 111 WSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSSRGSFYSTW 189 (327)
T ss_dssp CEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTSCEEEEETTSSEEEEE
T ss_pred ceECccccCCCCCeEEEEEECCCCEEEEeCCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCCcEEEEECCCcEEEEe
Confidence 3322111 1123344444333333333345544332 111211 11223445678899999999888766544434444
Q ss_pred eC--CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee-C---CCCCEEEEEE
Q 010759 365 NM--KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN-G---HREPVYSLAF 438 (502)
Q Consensus 365 d~--~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~-~---h~~~v~~l~~ 438 (502)
|- .+...+. ......+..+.+.+++. ++ .++.+|.+++++...++.-..+. + +...+.+|+|
T Consensus 190 d~gG~tW~~~~--~~~~~~~~~~~~~~~g~---------~~-~~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 190 EPGQTAWEPHN--RTTSRRLHNMGFTPDGR---------LW-MIVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp CTTCSSCEEEE--CCSSSCEEEEEECTTSC---------EE-EEETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred CCCCCceeECC--CCCCCccceeEECCCCC---------EE-EEeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 42 2223322 23445678888887764 33 44567888777433233322222 1 2235899999
Q ss_pred CCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe----cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 439 SPTGEYLASGSLDKSMHIWSLKEGKIVKTYT----GNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 439 spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~----~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
.|++.+++++. +|.| ++....|+.=.... ....++++.|.+++ .+++++.+|.|..++
T Consensus 258 ~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~-~~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 258 RTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD-QGFILGQKGILLRYV 319 (327)
T ss_dssp SSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT-EEEEECSTTEEEEEC
T ss_pred cCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC-ceEEEcCCceEEEEc
Confidence 99888777655 6766 45555554322222 12457889997555 466667788876553
No 259
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.70 E-value=1.2e-06 Score=91.87 Aligned_cols=269 Identities=15% Similarity=0.123 Sum_probs=146.2
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 159 ACAWSP-AGSLLASGSGDS-----------TARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 159 ~~~~sp-d~~~l~sgs~D~-----------~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
++++.| ++++++.||.+. .+.+||+.++.... +. .. . ..+.....++++..+++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~------~~--~~---~---~~~~~~~~~~~~~~~g~ 255 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD------RT--VT---V---TKHDMFCPGISMDGNGQ 255 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC------CE--EE---E---CSCCCSSCEEEECTTSC
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe------Cc--cc---C---CCCCCccccccCCCCCC
Confidence 567777 889989888653 57889887654321 10 00 0 01122234567788999
Q ss_pred EEEEEEC-CCcEEEEECCCceeEeecC-CC-CCEEEEEecCCCCEEEEec-CC-----CeEEEEeccCcceeEEeeeccc
Q 010759 227 LLATGSY-DGQARIWSTNGDLKCTLSK-HK-GPIFSLKWNKKGDYLLTGS-CD-----KTAIVWDVKTEEWKQQFEFHSG 297 (502)
Q Consensus 227 ~l~sg~~-dg~i~iw~~~~~~~~~~~~-h~-~~V~~l~~~~~~~~l~sgs-~D-----~~v~iwd~~~~~~~~~~~~~~~ 297 (502)
+++.|+. +..+.+||.....-..+.. +. ..-.++...+++..++.|+ .+ ..+.+||+.+..|...-.....
T Consensus 256 lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~~~~~~~~ 335 (656)
T 1k3i_A 256 IVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTSLPNAKVN 335 (656)
T ss_dssp EEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEEETTSCSG
T ss_pred EEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcceeCCCcccc
Confidence 9999985 4589999976443222211 11 1113445567888888888 44 5799999998887653110000
Q ss_pred CeE-----EEecCCCceEEEEcCC---------CeEEEEEcCCCcceeeecCCC---------cceeEEEEc-CCCCEEE
Q 010759 298 PTL-----DVDWRNNVSFATSSTD---------NMIYVCKIGENRPIKTFAGHQ---------GEVNCVKWD-PTGSLLA 353 (502)
Q Consensus 298 ~~~-----~~~~~~~~~~~~~~~d---------~~i~~~~~~~~~~~~~~~~h~---------~~v~~v~~~-p~~~~l~ 353 (502)
+.. .+...++..++.++.+ ..+..|+.....-......+. ..-.++.|. .++++++
T Consensus 336 p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v 415 (656)
T 1k3i_A 336 PMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILT 415 (656)
T ss_dssp GGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEE
T ss_pred ccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEE
Confidence 000 1111233334444333 345667766544222211111 112344443 3678888
Q ss_pred EEeCCC-----------cEEEEeCCCCceeeec--ccCCCcE-EEEEEccCCCCCCCCCCcEEEEEEeCC----------
Q 010759 354 SCSDDV-----------TAKIWNMKQDKYVHDL--REHSKEI-YTIRWSPTGSGTNNPNQQLILASASFD---------- 409 (502)
Q Consensus 354 sgs~dg-----------~i~iwd~~~~~~~~~~--~~~~~~i-~~~~~sp~g~~~~~~~~~~~l~sgs~d---------- 409 (502)
.|+.++ .|.+||..+....... ..+.... .+....|++. +++.|+.+
T Consensus 416 ~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~---------i~v~GG~~~~~~~~~~~~ 486 (656)
T 1k3i_A 416 FGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS---------TFITGGQRRGIPFEDSTP 486 (656)
T ss_dssp ECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC---------EEEECCBSBCCTTCCCSB
T ss_pred EeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC---------EEEECCcccCcCcCCCCc
Confidence 887543 5778887766543322 1112221 2333445654 55566543
Q ss_pred -CeEEEEeCCCCeEEE--EeeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 410 -STVKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 410 -g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
..+.+||..+.+-.. .+...+....+..+.|+|++++.||.
T Consensus 487 ~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 487 VFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp CCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred ccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 468999987765322 11112222344567799999999985
No 260
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.70 E-value=4.2e-06 Score=75.25 Aligned_cols=189 Identities=12% Similarity=0.142 Sum_probs=124.9
Q ss_pred eeEEeeecccC-eEEEecCCCceEEEEcCCC--eEEEEEcCCCcceeeecCCCcc-eeEEEEcCCCCEE-EEEeCCCcEE
Q 010759 288 WKQQFEFHSGP-TLDVDWRNNVSFATSSTDN--MIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLL-ASCSDDVTAK 362 (502)
Q Consensus 288 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l-~sgs~dg~i~ 362 (502)
.++++.....+ +..+.|.++..+.+++.++ .|+++|+.+++.+..+.-.... -..+++ ++..| ++.-.++.+.
T Consensus 33 vv~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~--~g~~ly~ltw~~~~v~ 110 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYRNGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISD--WKDKIVGLTWKNGLGF 110 (262)
T ss_dssp EEEEEECCTTCEEEEEEEETTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEE--ETTEEEEEESSSSEEE
T ss_pred EEEEecCCCCcccceEEEECCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEE--eCCEEEEEEeeCCEEE
Confidence 34445333322 2455666666677777765 8999999999887766533221 123444 34444 4444688999
Q ss_pred EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCC--C---CCEEEEE
Q 010759 363 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGH--R---EPVYSLA 437 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h--~---~~v~~l~ 437 (502)
+||..+.+.+.++.... .-..++ +++. .+++| ..++.|.++|..+.+.+.++.-. . ..++.+.
T Consensus 111 v~D~~t~~~~~ti~~~~-eG~glt--~dg~--------~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe 178 (262)
T 3nol_A 111 VWNIRNLRQVRSFNYDG-EGWGLT--HNDQ--------YLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELE 178 (262)
T ss_dssp EEETTTCCEEEEEECSS-CCCCEE--ECSS--------CEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEE
T ss_pred EEECccCcEEEEEECCC-CceEEe--cCCC--------EEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeE
Confidence 99999999888876432 222333 3442 23443 34678999999999888776431 1 3356688
Q ss_pred ECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEecC-------------CCEEEEEECCCCCEEEEEEC
Q 010759 438 FSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTGN-------------GGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 438 ~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~~-------------~~i~~~~ws~~g~~la~~~~ 491 (502)
|. +|+..|..-.+..|.+.|..+|+++..+... ...+++||+|++++|...+.
T Consensus 179 ~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 179 WV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp EE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred EE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 86 7776666656889999999999998887542 24689999999887766554
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.69 E-value=7.1e-06 Score=73.75 Aligned_cols=189 Identities=9% Similarity=0.017 Sum_probs=127.7
Q ss_pred eeEEeeecccC-eEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 288 WKQQFEFHSGP-TLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 288 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
.+.++.....+ +..+.|.++..+++.+.++.|+++|+.+++.+..+......-..+++.. +++.++.-.++.+.+||.
T Consensus 45 Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~ 123 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWMERLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSG 123 (268)
T ss_dssp EEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEEECTTCCEEEEEECS-SCEEEEESSSCEEEEEET
T ss_pred EEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEECCCCcceeEEEEeC-CEEEEEEccCCEEEEEEC
Confidence 34444333322 3466677777888999999999999999888776621111123455543 355555567889999999
Q ss_pred CCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CC---CCEEEEEECCC
Q 010759 367 KQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HR---EPVYSLAFSPT 441 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~---~~v~~l~~spd 441 (502)
.+.+.+.++.... .-..++ +++. .+++| ..++.|.++|..+.+.+.++.- +. ..++.|.|. +
T Consensus 124 ~Tl~~~~ti~~~~-eGwGLt--~Dg~--------~L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-d 190 (268)
T 3nok_A 124 MPPQRERTTRYSG-EGWGLC--YWNG--------KLVRS-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-N 190 (268)
T ss_dssp TTTEEEEEEECSS-CCCCEE--EETT--------EEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-T
T ss_pred CcCcEEEEEeCCC-ceeEEe--cCCC--------EEEEE-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-C
Confidence 9999888876432 223343 3332 24444 4588999999999988877643 21 245778887 7
Q ss_pred CCEEEEEeCCCcEEEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEEEEEE
Q 010759 442 GEYLASGSLDKSMHIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 442 g~~lasgs~Dg~i~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~la~~~ 490 (502)
|+..|..-.+..|.+-|..+|+++..+... ...+++||+|++++|...+
T Consensus 191 G~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 191 GVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp TEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 776666656889999999999998887431 2468999999887555443
No 262
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.68 E-value=3.5e-06 Score=75.70 Aligned_cols=179 Identities=11% Similarity=0.024 Sum_probs=127.5
Q ss_pred CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCe-EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec
Q 010759 256 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA 334 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~ 334 (502)
-..+|.|+. +..+++.+.+|.|+++|+.+++....+ ...... ..+...++..+++.-.++.++++|..+.+.+.++.
T Consensus 56 ftqGL~~~~-~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 56 FTQGLVFHQ-GHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp CEEEEEEET-TEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred ccceEEEEC-CEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 346888874 556678888899999999999988887 443322 33666677778888889999999999998888776
Q ss_pred CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC-----CcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 335 GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 335 ~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
.- ..-..++ ++++.|+.+..+++|.++|..+.+.+..+.... ..+..+.|. +|. +.+....+
T Consensus 134 ~~-~eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~---------lyanvw~s 200 (268)
T 3nok_A 134 YS-GEGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV---------IYANIWHS 200 (268)
T ss_dssp CS-SCCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEETTC
T ss_pred CC-CceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE---------EEEEECCC
Confidence 32 2223444 567777766678899999999988877654321 133556665 442 44555567
Q ss_pred CeEEEEeCCCCeEEEEeeCC-------------CCCEEEEEECCCCCEEEEEe
Q 010759 410 STVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 410 g~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~~lasgs 449 (502)
+.|.+.|..+++.+..+.-. ....+.|||+|+++.|...+
T Consensus 201 ~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 201 SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 89999999999998876521 13568999999865554444
No 263
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.68 E-value=1.1e-05 Score=71.86 Aligned_cols=180 Identities=13% Similarity=0.116 Sum_probs=124.7
Q ss_pred CEEEEEecCCCCEEEEecCC--CeEEEEeccCcceeEEeeecccCe-EEEecCCCceEEEEcCCCeEEEEEcCCCcceee
Q 010759 256 PIFSLKWNKKGDYLLTGSCD--KTAIVWDVKTEEWKQQFEFHSGPT-LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKT 332 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D--~~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~ 332 (502)
-..+|.|++ +..+.+.+.+ .+|+.+|+.+++............ ..+...++..+...-.++.++++|..+.+.+.+
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~t 100 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRAR 100 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEE
Confidence 456899987 4455566654 489999999999988776544332 334555677778888899999999999988888
Q ss_pred ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCC-----CcEEEEEEccCCCCCCCCCCcEEEEEEe
Q 010759 333 FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHS-----KEIYTIRWSPTGSGTNNPNQQLILASAS 407 (502)
Q Consensus 333 ~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~-----~~i~~~~~sp~g~~~~~~~~~~~l~sgs 407 (502)
+.... .-..++ +++..|+.+..++.|.++|..+.+.+..+.... ..+..+.|. +|. +.+..-
T Consensus 101 i~~~~-~Gwglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~---------lyanvw 167 (243)
T 3mbr_X 101 FRYPG-EGWALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE---------LLANVW 167 (243)
T ss_dssp EECSS-CCCEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---------EEEEET
T ss_pred EeCCC-CceEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE---------EEEEEC
Confidence 76332 223444 456655555568899999999988776654321 234455554 332 445444
Q ss_pred CCCeEEEEeCCCCeEEEEeeCC-------------CCCEEEEEECCCCCEEEEEe
Q 010759 408 FDSTVKLWDVELGKLLYSLNGH-------------REPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 408 ~dg~i~iwd~~~~~~~~~~~~h-------------~~~v~~l~~spdg~~lasgs 449 (502)
.+..|.+.|..+++.+..+.-. ....+.|||+|++..|...|
T Consensus 168 ~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 168 LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 6789999999999998876521 13568899999876655554
No 264
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.62 E-value=1.9e-05 Score=81.07 Aligned_cols=229 Identities=13% Similarity=0.096 Sum_probs=138.0
Q ss_pred CCEEEEecCCCeEEEEeccCcceeEEeeecc---------cCeEEEecCCCc-eEEEEc------CCCeEEEEEcCCCcc
Q 010759 266 GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHS---------GPTLDVDWRNNV-SFATSS------TDNMIYVCKIGENRP 329 (502)
Q Consensus 266 ~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~---------~~~~~~~~~~~~-~~~~~~------~d~~i~~~~~~~~~~ 329 (502)
+..++.++.|+.|..+|..+++.+-.+.... .++..-.-.+.. .++.++ .++.|+.+|..+++.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 5678888899999999999998765554322 122110000111 333332 367888888877665
Q ss_pred eeeecCCC-----------------------------------------cceeEEEEcCCCCEEEEEeC-----------
Q 010759 330 IKTFAGHQ-----------------------------------------GEVNCVKWDPTGSLLASCSD----------- 357 (502)
Q Consensus 330 ~~~~~~h~-----------------------------------------~~v~~v~~~p~~~~l~sgs~----------- 357 (502)
+-.+.... ..-..+++.|...+|+.++.
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 43221100 00123566777777776653
Q ss_pred ---------C----CcEEEEeCCCCceeeeccc--CC--------CcEEEEEEc-cCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 358 ---------D----VTAKIWNMKQDKYVHDLRE--HS--------KEIYTIRWS-PTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 358 ---------d----g~i~iwd~~~~~~~~~~~~--~~--------~~i~~~~~s-p~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
| +.|..+|..+++.+-.++. |. .++.. ... .+|. ...+++.++.+|.++
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~-~~~~~~G~------~~~~v~~~~~~G~l~ 349 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLF-DYKAKDGK------IVKATAHADRNGFFY 349 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEE-EEECSSSC------EEEEEEEECTTSEEE
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEE-eeecCCCC------EEEEEEEECCCceEE
Confidence 2 5799999999988765542 21 11111 111 2231 012677899999999
Q ss_pred EEeCCCCeEEEEeeCCC-------------CCE--------------------------------EEEEECCCCCEEEEE
Q 010759 414 LWDVELGKLLYSLNGHR-------------EPV--------------------------------YSLAFSPTGEYLASG 448 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h~-------------~~v--------------------------------~~l~~spdg~~lasg 448 (502)
++|..+|+.+..+.... .++ ..++|+|+...+.+.
T Consensus 350 ~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~ 429 (582)
T 1flg_A 350 VVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVP 429 (582)
T ss_dssp EEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEE
T ss_pred EEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEe
Confidence 99999999987765331 000 134677765544432
Q ss_pred e---------------------------------CCCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEECCCeE
Q 010759 449 S---------------------------------LDKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 449 s---------------------------------~Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
. .+|.|..||+.+|+.+........+..-.....|.+++.++.|+.+
T Consensus 430 ~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l 509 (582)
T 1flg_A 430 ANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYF 509 (582)
T ss_dssp EECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEE
T ss_pred chhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcE
Confidence 2 3688999999999998777543332222222356788889999999
Q ss_pred EEEEee
Q 010759 496 CVLDFR 501 (502)
Q Consensus 496 ~v~~~~ 501 (502)
+.||.+
T Consensus 510 ~A~D~~ 515 (582)
T 1flg_A 510 KAFDAK 515 (582)
T ss_dssp EEEETT
T ss_pred EEEECC
Confidence 999864
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.61 E-value=0.00018 Score=68.84 Aligned_cols=243 Identities=9% Similarity=-0.003 Sum_probs=147.8
Q ss_pred eEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeee
Q 010759 216 VTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 216 V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
.+|.+..+++ +|+.+. ...|+..+..+.....+......+.+++|++.+..|+ +-...+.|..+++........+..
T Consensus 36 ~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~ 113 (349)
T 3v64_C 36 RSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVST 113 (349)
T ss_dssp SCEEESSSCC-EEEEEC-BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECS
T ss_pred CcccccccCc-eeEeec-ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeC
Confidence 3455545533 333333 3457777776654443333334578999997666554 555678999999877654333322
Q ss_pred c--ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCE-EEEEeCC-CcEEEEeCCCCc
Q 010759 295 H--SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSL-LASCSDD-VTAKIWNMKQDK 370 (502)
Q Consensus 295 ~--~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~-l~sgs~d-g~i~iwd~~~~~ 370 (502)
. ...-+.++|.....+++....+.|.+.+.........+...-.....++++|.+.. +++-... +.|..+++....
T Consensus 114 ~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~ 193 (349)
T 3v64_C 114 GLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG 193 (349)
T ss_dssp SCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC
Confidence 1 22235667777777788888889999988765433333333456789999986554 4444444 778888876443
Q ss_pred eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeC
Q 010759 371 YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 371 ~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~ 450 (502)
....+.........++++|.+. .+..+-+..+.|..+|+........+.........|++ ..+..+++-..
T Consensus 194 ~~~~~~~~~~~PnGla~d~~~~--------~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 194 RRIIADTHLFWPNGLTIDYAGR--------RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp CEESCCSSCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred cEEEEECCCCCcceEEEeCCCC--------EEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCC
Confidence 2222222234567899987654 24444556778999998743322223333345677888 34555566666
Q ss_pred CCcEEEEeCCCCeeEEEEe
Q 010759 451 DKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 451 Dg~i~iw~~~~~~~~~~~~ 469 (502)
.+.|..++..+|+.+..+.
T Consensus 265 ~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 265 TKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TTEEEEEETTTCCSCEEEE
T ss_pred CCeEEEEEccCCCccEEec
Confidence 7889888866776555543
No 266
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.59 E-value=3.9e-05 Score=68.36 Aligned_cols=179 Identities=11% Similarity=0.071 Sum_probs=122.9
Q ss_pred eEEEecCCCceEEEEcCC--CeEEEEEcCCCcceeeecCCCcc-eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 299 TLDVDWRNNVSFATSSTD--NMIYVCKIGENRPIKTFAGHQGE-VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 299 ~~~~~~~~~~~~~~~~~d--~~i~~~~~~~~~~~~~~~~h~~~-v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
+..+.|.++..+.+++.+ ..|+++|+.+++.+....-.... -..+++. .+++++..-.++.+.+||..+.+.+.++
T Consensus 23 tqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~-~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW-RDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE-TTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe-CCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 345667777677777765 48999999999887766533221 1334443 2445555567899999999999988887
Q ss_pred ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCC-----CCEEEEEECCCCCEEEEEeC
Q 010759 376 REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHR-----EPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 376 ~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~-----~~v~~l~~spdg~~lasgs~ 450 (502)
.... .-..++ +++. .+++| ..++.|.++|..+.+.+.++.-.. ..++.+.|. +|+..|..-.
T Consensus 102 ~~~~-~Gwglt--~dg~--------~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 102 RYPG-EGWALT--SDDS--------HLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp ECSS-CCCEEE--ECSS--------CEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred eCCC-CceEEe--eCCC--------EEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 6533 234444 3442 24444 457899999999998887764321 345677776 6776666656
Q ss_pred CCcEEEEeCCCCeeEEEEecC--------------CCEEEEEECCCCCEEEEEEC
Q 010759 451 DKSMHIWSLKEGKIVKTYTGN--------------GGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 451 Dg~i~iw~~~~~~~~~~~~~~--------------~~i~~~~ws~~g~~la~~~~ 491 (502)
+..|.+.|..+|+++..+.-. ...+++||+|++++|...+.
T Consensus 169 s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 169 TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 789999999999998887521 24689999999887765543
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.55 E-value=0.00014 Score=70.60 Aligned_cols=242 Identities=9% Similarity=-0.001 Sum_probs=147.6
Q ss_pred EEEEECCCCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccCcceeEEeeec
Q 010759 217 TTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKTEEWKQQFEFH 295 (502)
Q Consensus 217 ~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~~~~~~~~~~~ 295 (502)
.|.+..+.+ +|+.+. ...|+..++.+.....+......+.+++|++.+..| ++-...+.|..+++........+...
T Consensus 80 ~C~~~~~~~-~l~~~~-~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~ 157 (386)
T 3v65_B 80 SCKALGPEP-VLLFAN-RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTG 157 (386)
T ss_dssp CEEECSSCC-EEEEEC-BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSS
T ss_pred eECCccccc-eeEeec-CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCC
Confidence 344444433 343333 356777787665444333334457899999766555 45566789999998776543333221
Q ss_pred --ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEE-eCC-CcEEEEeCCCCce
Q 010759 296 --SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASC-SDD-VTAKIWNMKQDKY 371 (502)
Q Consensus 296 --~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sg-s~d-g~i~iwd~~~~~~ 371 (502)
...-+.++|.....+++-...+.|.+.++........+.........+++.|.+..|+.. ... +.|..+++.....
T Consensus 158 ~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 237 (386)
T 3v65_B 158 LESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGR 237 (386)
T ss_dssp CSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCc
Confidence 122356677777777777778888888876544333333334567899999876655444 344 6788888764432
Q ss_pred eeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCC
Q 010759 372 VHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLD 451 (502)
Q Consensus 372 ~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~D 451 (502)
.............++++|.+. .+..+-+..+.|..+|+........+.........|++ ..+.++++-...
T Consensus 238 ~~~~~~~~~~PnGlavd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~ 308 (386)
T 3v65_B 238 RIIADTHLFWPNGLTIDYAGR--------RMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHT 308 (386)
T ss_dssp EEEECSSCSCEEEEEEEGGGT--------EEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTT
T ss_pred EEEEECCCCCeeeEEEeCCCC--------EEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCC
Confidence 222222234467899987653 24445556788999998743332223333345678888 345556666677
Q ss_pred CcEEEEeCCCCeeEEEEe
Q 010759 452 KSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 452 g~i~iw~~~~~~~~~~~~ 469 (502)
+.|..++..+|+.+.++.
T Consensus 309 ~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 309 KSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TEEEEEETTTCCSCEEEE
T ss_pred CeEEEEECCCCcceEEEc
Confidence 889999977777665554
No 268
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.49 E-value=2.5e-05 Score=83.02 Aligned_cols=196 Identities=13% Similarity=0.084 Sum_probs=112.8
Q ss_pred ccccc-ceeEEEEC-CCCCEEEEEe-CC----CcEEEEecCCC-CCCCCCCCCCceEEEEEeeecccccCCCCeEEEEEC
Q 010759 151 EGHTS-EVCACAWS-PAGSLLASGS-GD----STARIWTIADG-TSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWN 222 (502)
Q Consensus 151 ~~H~~-~V~~~~~s-pd~~~l~sgs-~D----~~i~iW~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s 222 (502)
++|.. .+.+.+|| |||++||-+. .+ .+|+++|+.++ .... .. +. .....++|+
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~----~~--------~~-------~~~~~~~Ws 229 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIA----DK--------VS-------GTNGEIVWG 229 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCC----CC--------EE-------EECSCCEEC
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCC----cc--------cc-------CceeeEEEe
Confidence 34554 78889999 9999877433 22 35999999876 4210 00 00 012457899
Q ss_pred CCCCEEEEEECC-----CcEEEEECCCce---eEeec-CCCCCEEEEEecCCCCEEEEecC---CCeEEEEeccCc--ce
Q 010759 223 GEGTLLATGSYD-----GQARIWSTNGDL---KCTLS-KHKGPIFSLKWNKKGDYLLTGSC---DKTAIVWDVKTE--EW 288 (502)
Q Consensus 223 ~~~~~l~sg~~d-----g~i~iw~~~~~~---~~~~~-~h~~~V~~l~~~~~~~~l~sgs~---D~~v~iwd~~~~--~~ 288 (502)
|||+.|+....+ ..|+++++.+.. ...+. ....-..++.|+|+|++|+..+. ...|.++|+.++ ..
T Consensus 230 pDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~ 309 (751)
T 2xe4_A 230 PDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHN 309 (751)
T ss_dssp SSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCC
T ss_pred cCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCc
Confidence 999888777665 257777776432 22222 22334678899999998876553 346888898765 23
Q ss_pred --eEEeeecccCeEEEecCCCceE-EEEcCC----CeEEEEEcCCCcceee-ecCCCc--ceeEEEEcCCCCEEEEEeCC
Q 010759 289 --KQQFEFHSGPTLDVDWRNNVSF-ATSSTD----NMIYVCKIGENRPIKT-FAGHQG--EVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 289 --~~~~~~~~~~~~~~~~~~~~~~-~~~~~d----~~i~~~~~~~~~~~~~-~~~h~~--~v~~v~~~p~~~~l~sgs~d 358 (502)
.........+...++|..+..| +.+..+ ..|+.+++........ +..|.. .+..+.+. .+.++++...+
T Consensus 310 ~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~ 388 (751)
T 2xe4_A 310 TLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRA 388 (751)
T ss_dssp CEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEET
T ss_pred eeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeC
Confidence 2222233345555664334333 343332 3677777764222222 233333 34556655 34556777778
Q ss_pred CcEE--EEeC
Q 010759 359 VTAK--IWNM 366 (502)
Q Consensus 359 g~i~--iwd~ 366 (502)
+..+ ++++
T Consensus 389 g~~~l~~~dl 398 (751)
T 2xe4_A 389 GLTRIWTMMA 398 (751)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 8655 4554
No 269
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.47 E-value=0.00015 Score=71.60 Aligned_cols=237 Identities=10% Similarity=0.141 Sum_probs=141.8
Q ss_pred CeEEEEECC-CCCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecC-CC----eEEEEeccCcce
Q 010759 215 DVTTLDWNG-EGTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSC-DK----TAIVWDVKTEEW 288 (502)
Q Consensus 215 ~V~~l~~s~-~~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~-D~----~v~iwd~~~~~~ 288 (502)
....|+|+| ++..|+.+...+.|+.++..+.....+.........|+|++++++|+.+.. .+ .+...+ ..+.+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~-~~g~~ 216 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILT-RESGF 216 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEE-GGGTS
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEe-CCCce
Confidence 457889998 455566665558888899887655555445556789999999996665543 22 122222 22211
Q ss_pred eEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCC
Q 010759 289 KQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~ 367 (502)
... ..+.. ......++++| +|.++++-..++.|..++..
T Consensus 217 ~~~------------------------------------~~l~~----~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~ 256 (430)
T 3tc9_A 217 KVI------------------------------------TELTK----GQNCNGAETHPINGELYFNSWNAGQVFRYDFT 256 (430)
T ss_dssp CSE------------------------------------EEEEE----CSSCCCEEECTTTCCEEEEETTTTEEEEEETT
T ss_pred eee------------------------------------eeecc----CCCceEEEEeCCCCEEEEEECCCCEEEEEECC
Confidence 100 00001 12245688899 77777777778899999987
Q ss_pred CCceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC--CeE--EEEeeCC-------------
Q 010759 368 QDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL--GKL--LYSLNGH------------- 429 (502)
Q Consensus 368 ~~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~--~~~--~~~~~~h------------- 429 (502)
.+........ .......++|+|++. .++++-...+.|..++... +.. +..+.+.
T Consensus 257 ~~~~~~~~~~~~~~~P~gia~~pdG~--------~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~ 328 (430)
T 3tc9_A 257 TQETTPLFTIQDSGWEFHIQFHPSGN--------YAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKK 328 (430)
T ss_dssp TTEEEEEEECSSSSCCEEEEECTTSS--------EEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGG
T ss_pred CCcEEEEEEcCCCCcceeEEEcCCCC--------EEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcc
Confidence 6654221111 123457899999885 2445556678898887652 222 1222111
Q ss_pred --CCCEE-EEEEC--------CCCCEEEEEeCCCcEEEEeCCCCeeEEEEec---------CC---------CEEEEEEC
Q 010759 430 --REPVY-SLAFS--------PTGEYLASGSLDKSMHIWSLKEGKIVKTYTG---------NG---------GIFEVCWN 480 (502)
Q Consensus 430 --~~~v~-~l~~s--------pdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~---------~~---------~i~~~~ws 480 (502)
-..-. .++.. ++|.++++=...+.|+.++ .+|.+...... .+ ....++++
T Consensus 329 a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd 407 (430)
T 3tc9_A 329 ARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYD 407 (430)
T ss_dssp CBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEE
T ss_pred eEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEE
Confidence 01123 45553 4466666666678899998 45655433311 11 36899999
Q ss_pred C-CCCEEEEEECCCeEEEEEee
Q 010759 481 K-EGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 481 ~-~g~~la~~~~~~~v~v~~~~ 501 (502)
| +|.++++-..+..|+.++..
T Consensus 408 ~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 408 EERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEccC
Confidence 9 57777777788999988764
No 270
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.43 E-value=3.6e-05 Score=80.55 Aligned_cols=265 Identities=9% Similarity=0.040 Sum_probs=144.5
Q ss_pred EEEECC-CCCEEEEEECCC-----------cEEEEECCCcee---Eee-cCCCCCEEEEEecCCCCEEEEecC-CCeEEE
Q 010759 218 TLDWNG-EGTLLATGSYDG-----------QARIWSTNGDLK---CTL-SKHKGPIFSLKWNKKGDYLLTGSC-DKTAIV 280 (502)
Q Consensus 218 ~l~~s~-~~~~l~sg~~dg-----------~i~iw~~~~~~~---~~~-~~h~~~V~~l~~~~~~~~l~sgs~-D~~v~i 280 (502)
.+++.+ ++++++.|+.+. .+.+||...... ..+ ..+.....++++..++..++.|+. +..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 456666 889999988653 578888754321 122 122233345677788999888884 568999
Q ss_pred EeccCcceeEEeeecccC--eEEEecCCCceEEEEc-CC-----CeEEEEEcCCCcceeeecCCC-cce----eEEEEcC
Q 010759 281 WDVKTEEWKQQFEFHSGP--TLDVDWRNNVSFATSS-TD-----NMIYVCKIGENRPIKTFAGHQ-GEV----NCVKWDP 347 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~-~d-----~~i~~~~~~~~~~~~~~~~h~-~~v----~~v~~~p 347 (502)
||+.+..|...-...... .......++..++.++ .+ ..+.+||..+..-.. +.... .+. ....+..
T Consensus 270 yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~~~~~~~ 348 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADKQGLYRS 348 (656)
T ss_dssp EEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCTTGGGTT
T ss_pred ecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccccceeec
Confidence 999998877643322211 1122233566667666 33 467888876543211 10000 000 0011223
Q ss_pred CCCEEEEEeCCC---------cEEEEeCCCCceeeecccCC---------CcEEEEEEccCCCCCCCCCCcEEEEEEeCC
Q 010759 348 TGSLLASCSDDV---------TAKIWNMKQDKYVHDLREHS---------KEIYTIRWSPTGSGTNNPNQQLILASASFD 409 (502)
Q Consensus 348 ~~~~l~sgs~dg---------~i~iwd~~~~~~~~~~~~~~---------~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d 409 (502)
++..++.|+.+| .+..||..+......+..+. ....++.+...+ . .+++.|+.+
T Consensus 349 ~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~-------~-~i~v~GG~~ 420 (656)
T 1k3i_A 349 DNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVK-------G-KILTFGGSP 420 (656)
T ss_dssp TCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTT-------T-EEEEECCBS
T ss_pred CCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCC-------C-eEEEEeCCC
Confidence 455555555444 46778877665332221111 112333332211 1 255566643
Q ss_pred C-----------eEEEEeCCCCeEEEEe--eCCCCC-EEEEEECCCCCEEEEEeCC-----------CcEEEEeCCCCee
Q 010759 410 S-----------TVKLWDVELGKLLYSL--NGHREP-VYSLAFSPTGEYLASGSLD-----------KSMHIWSLKEGKI 464 (502)
Q Consensus 410 g-----------~i~iwd~~~~~~~~~~--~~h~~~-v~~l~~spdg~~lasgs~D-----------g~i~iw~~~~~~~ 464 (502)
+ .|.+||..+..-.... .-.... -.+++..|+|++++.||.+ ..+.+||..+.+-
T Consensus 421 ~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W 500 (656)
T 1k3i_A 421 DYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPEIYVPEQDTF 500 (656)
T ss_dssp SSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEE
T ss_pred CCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCCcccceEEEcCCCCce
Confidence 2 6788888766543322 111122 2345667899999999864 4689999877553
Q ss_pred EEE--Eec-CCCEEEEEECCCCCEEEEEEC
Q 010759 465 VKT--YTG-NGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 465 ~~~--~~~-~~~i~~~~ws~~g~~la~~~~ 491 (502)
... ... ........+.|+|+.+++|+.
T Consensus 501 ~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 501 YKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred eecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 221 111 111234557799999999885
No 271
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.42 E-value=0.0013 Score=61.81 Aligned_cols=224 Identities=12% Similarity=0.077 Sum_probs=134.6
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEE-EEecCCCeEEEEeccC----cceeEEeee--cccCeEEEecCCC
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYL-LTGSCDKTAIVWDVKT----EEWKQQFEF--HSGPTLDVDWRNN 307 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l-~sgs~D~~v~iwd~~~----~~~~~~~~~--~~~~~~~~~~~~~ 307 (502)
..|+..++.+.....+......+.+++|++.+..| ++-...+.|..+++.+ ......+.. ....-+.++|...
T Consensus 10 ~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~ 89 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTT
T ss_pred CeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCC
Confidence 46777887664333333334567899999876554 5556678999999876 222222211 1222345666667
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-C-CcEEEEeCCCCceeeec-ccCCCcEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-D-VTAKIWNMKQDKYVHDL-REHSKEIYT 384 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-d-g~i~iwd~~~~~~~~~~-~~~~~~i~~ 384 (502)
..+++-...+.|.+++.........+.........++++|.+..|+.+.. . +.|...++.... ...+ ...-.....
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~-~~~~~~~~~~~P~g 168 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-IYSLVTENIQWPNG 168 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC-EEEEECSSCSCEEE
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC-eEEEEECCCCCceE
Confidence 77777788889999988754433333333356789999986665544443 3 678888875432 2222 222345678
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
++++|++. .+..+-+..+.|..+|+.... .+............|++. .+.++++-...+.|..++..+|
T Consensus 169 la~d~~~~--------~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g 239 (316)
T 1ijq_A 169 ITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTG 239 (316)
T ss_dssp EEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTC
T ss_pred EEEeccCC--------EEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCC
Confidence 99988654 244455567789999987432 222211223345778885 3556666667789999998777
Q ss_pred eeEEEE
Q 010759 463 KIVKTY 468 (502)
Q Consensus 463 ~~~~~~ 468 (502)
+.+..+
T Consensus 240 ~~~~~i 245 (316)
T 1ijq_A 240 SDVNLL 245 (316)
T ss_dssp CCCEEE
T ss_pred cceEEE
Confidence 655544
No 272
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.41 E-value=0.00034 Score=65.51 Aligned_cols=217 Identities=12% Similarity=0.078 Sum_probs=128.5
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
.....++|+|+|+++++-..++.|..|+..... ...... ...+..+++.++|+++++....
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~------------~~~~~~-------~~~p~gia~~~dG~l~vad~~~ 92 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ------------QIHATV-------EGKVSGLAFTSNGDLVATGWNA 92 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE------------EEEEEC-------SSEEEEEEECTTSCEEEEEECT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce------------EEEEeC-------CCCceeEEEcCCCcEEEEeccC
Confidence 346789999999988877788999999864321 000010 2357889999999976665443
Q ss_pred C--cEEEEECCCceeEeecC--CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEE-ee---------ecccCeE
Q 010759 235 G--QARIWSTNGDLKCTLSK--HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQ-FE---------FHSGPTL 300 (502)
Q Consensus 235 g--~i~iw~~~~~~~~~~~~--h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~-~~---------~~~~~~~ 300 (502)
. .|..++........+.. .......++..+.+..+++-+..+.|.++|..++..... .. .......
T Consensus 93 ~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pn 172 (306)
T 2p4o_A 93 DSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAAN 172 (306)
T ss_dssp TSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEE
T ss_pred CcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCC
Confidence 2 35556644332222211 122234555555555555655688999999865421110 00 0011223
Q ss_pred EEecCCCceEEEEcCCCeEEEEEcCC-Ccc--eeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--eeec
Q 010759 301 DVDWRNNVSFATSSTDNMIYVCKIGE-NRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDL 375 (502)
Q Consensus 301 ~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~--~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~~~~ 375 (502)
.+.......+++....+.|+++++.. +.. ...+.. ......+++.++|+++++....+.|.+++.. ++. +..+
T Consensus 173 gis~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~ 250 (306)
T 2p4o_A 173 GLKRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQA 250 (306)
T ss_dssp EEEEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECG
T ss_pred CcCcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeec
Confidence 34333445667777788899998864 211 112211 1345678999999988888888899999975 544 2233
Q ss_pred ccCCCcEEEEEEc---cCCC
Q 010759 376 REHSKEIYTIRWS---PTGS 392 (502)
Q Consensus 376 ~~~~~~i~~~~~s---p~g~ 392 (502)
........+++|. |++.
T Consensus 251 ~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 251 EQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp GGTCTTEEEEEECCSTTTTT
T ss_pred ccccCCceEEEEecccCCCC
Confidence 3333567888887 6653
No 273
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.36 E-value=0.0013 Score=67.96 Aligned_cols=327 Identities=10% Similarity=0.031 Sum_probs=172.2
Q ss_pred ccceeEEEECCCCCEEE-EEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC-EEEEE
Q 010759 154 TSEVCACAWSPAGSLLA-SGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT-LLATG 231 (502)
Q Consensus 154 ~~~V~~~~~spd~~~l~-sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~-~l~sg 231 (502)
...+.+++|++.+..|+ +=...+.|..+++...... ... +. ........+++.+.+. ++++-
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~---------~~v---~~----~~~~~P~GlAvD~~~~~ly~~d 102 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---------QNV---VV----SGLLSPDGLACDWLGEKLYWTD 102 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----C---------EEE---EC----SSCSCEEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCce---------EEE---Ee----CCCCCcCeEEEEecCCEEEEEe
Confidence 44578999999766555 4445678888887542100 000 00 1123577889988555 44455
Q ss_pred ECCCcEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEecC--CCeEEEEeccCcceeEEeeecccCe--EEEecCC
Q 010759 232 SYDGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGPT--LDVDWRN 306 (502)
Q Consensus 232 ~~dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~ 306 (502)
...+.|.+.+..+.....+. ..-....+|++.|.+.+|+.... .+.|...++................ +.++...
T Consensus 103 ~~~~~I~v~~~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~ 182 (619)
T 3s94_A 103 SETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEE 182 (619)
T ss_dssp TTTTEEEEEETTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTT
T ss_pred CCCCEEEEEECCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccC
Confidence 56789999999876554443 33344578999997666655443 3566666665433222221111222 3444445
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc-----
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE----- 381 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~----- 381 (502)
...+++-...+.|..+++..........+......++++..+ .++++-...+.|...|..+++....+......
T Consensus 183 ~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~ 261 (619)
T 3s94_A 183 QKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFED-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIH 261 (619)
T ss_dssp TEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSS-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEE
T ss_pred CEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEE
Confidence 666666667778888877654332222222223346777655 55556556778888887665433222111000
Q ss_pred --------------------E--EEE---------EEccCCC-------CCCCCCCcEEEEEEeCCCeEEEEeCCCCeE-
Q 010759 382 --------------------I--YTI---------RWSPTGS-------GTNNPNQQLILASASFDSTVKLWDVELGKL- 422 (502)
Q Consensus 382 --------------------i--~~~---------~~sp~g~-------~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~- 422 (502)
+ .|+ +..|.|. .+....+.++|+ +. .+.|+..++.....
T Consensus 262 v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~~d~~~C~~~~~~~Ll~-~~-~~~i~~i~l~~~~~~ 339 (619)
T 3s94_A 262 AFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLLENGKTCKDGATELLLL-AR-RTDLRRISLDTPDFT 339 (619)
T ss_dssp ECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBCTTSSCBCSSCSEEEEE-EE-SSCEEEEESSSTTCC
T ss_pred EEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheecccCcccCCCCceEEEE-Ec-ccceEEEecCCCccc
Confidence 0 011 1112221 111111223333 32 34677777765421
Q ss_pred --EEEeeCCCCCEEEEEECCCCCEE-EEEeCCCcEEEEeCCCCeeEEEEec-CCCEEEEEECCCCC-EEEEEECCCeEEE
Q 010759 423 --LYSLNGHREPVYSLAFSPTGEYL-ASGSLDKSMHIWSLKEGKIVKTYTG-NGGIFEVCWNKEGD-KIAACFANHTVCV 497 (502)
Q Consensus 423 --~~~~~~h~~~v~~l~~spdg~~l-asgs~Dg~i~iw~~~~~~~~~~~~~-~~~i~~~~ws~~g~-~la~~~~~~~v~v 497 (502)
...+.+ ...+.+|+|.+.+..| ++-...+.|+.+++........... -....++++.+.+. ...+-+..+.|.|
T Consensus 340 ~~~~~~~~-l~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v 418 (619)
T 3s94_A 340 DIVLQLED-IRHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEV 418 (619)
T ss_dssp CEECCCSC-CSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred eeEEeccc-cCccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEE
Confidence 111222 2457889999865554 4444578899998875443333322 24567888887555 4444455778877
Q ss_pred EEe
Q 010759 498 LDF 500 (502)
Q Consensus 498 ~~~ 500 (502)
.++
T Consensus 419 ~~~ 421 (619)
T 3s94_A 419 TRL 421 (619)
T ss_dssp EET
T ss_pred EeC
Confidence 764
No 274
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.36 E-value=0.002 Score=62.79 Aligned_cols=233 Identities=12% Similarity=0.060 Sum_probs=141.7
Q ss_pred EEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCc----ceeEEeeeccc--Ce
Q 010759 227 LLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTE----EWKQQFEFHSG--PT 299 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~----~~~~~~~~~~~--~~ 299 (502)
+|+.+. ...|+..++.+.....+......+.+|+|++.+..|+ +-...+.|+.+++... .....+..... .-
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g 163 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG 163 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEE
T ss_pred eeEEec-cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCccc
Confidence 444443 3678888877654444444556778999998766554 5556788999988652 12222221111 23
Q ss_pred EEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-C-CCcEEEEeCCCCceeeeccc
Q 010759 300 LDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-D-DVTAKIWNMKQDKYVHDLRE 377 (502)
Q Consensus 300 ~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~-dg~i~iwd~~~~~~~~~~~~ 377 (502)
++++|.....+++-...+.|.+.++........+...-.....|++.|.+..|+... . .+.|...++........+..
T Consensus 164 lavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~~~~ 243 (400)
T 3p5b_L 164 LAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTE 243 (400)
T ss_dssp EEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEEECS
T ss_pred EEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEEEEC
Confidence 566777777788888888999888876554444433344578999999666555443 2 36788888765433222222
Q ss_pred CCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEEeCCCcEE
Q 010759 378 HSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGSLDKSMH 455 (502)
Q Consensus 378 ~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs~Dg~i~ 455 (502)
.-.....|+++|.+. .+..+-+..+.|..+|+........+. +.......|++. .+.++.+-...+.|.
T Consensus 244 ~l~~P~glavd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~~~~~V~ 314 (400)
T 3p5b_L 244 NIQWPNGITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIF 314 (400)
T ss_dssp SCSCEEEEEEETTTT--------EEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEE-TTEEEEEESSSCSEE
T ss_pred CCCceEEEEEEeCCC--------EEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEe-CCEEEEecCCCCeEE
Confidence 334568899987654 233444567789999986433222222 223345677773 344555666678899
Q ss_pred EEeCCCCeeEEEEe
Q 010759 456 IWSLKEGKIVKTYT 469 (502)
Q Consensus 456 iw~~~~~~~~~~~~ 469 (502)
.++..+|+.+.++.
T Consensus 315 ~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 315 SANRLTGSDVNLLA 328 (400)
T ss_dssp EEESSSCCCCEEEE
T ss_pred EEEcCCCCceEEEe
Confidence 99977776655554
No 275
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.34 E-value=3.3e-05 Score=82.11 Aligned_cols=222 Identities=11% Similarity=0.035 Sum_probs=115.7
Q ss_pred CeEEEEEC-CCCCEEEEEEC-CC----cEEEEECCCc-eeE--eecCCCCCEEEEEecCCCCEEEEecCCC-----eEEE
Q 010759 215 DVTTLDWN-GEGTLLATGSY-DG----QARIWSTNGD-LKC--TLSKHKGPIFSLKWNKKGDYLLTGSCDK-----TAIV 280 (502)
Q Consensus 215 ~V~~l~~s-~~~~~l~sg~~-dg----~i~iw~~~~~-~~~--~~~~h~~~V~~l~~~~~~~~l~sgs~D~-----~v~i 280 (502)
.+...+|| |||++|+-+.. +| .|+++++.+. ... .+. ....++.|+|+++.|+..+.|. .|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDHTSLFYVTKDETLRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSSTTEEEEEEECTTCCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCCCEEEEEEECCCCCCCEEEE
Confidence 57788999 99998875433 33 4999998765 311 111 1124678999998887766542 2333
Q ss_pred EeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec-CCCcceeEEEEcCCCCEEEEEeC--
Q 010759 281 WDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA-GHQGEVNCVKWDPTGSLLASCSD-- 357 (502)
Q Consensus 281 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~sgs~-- 357 (502)
+++.++.. .....+. ........+.|+|||++|+..+.
T Consensus 252 ~~lgt~~~---------------------------------------~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~ 292 (751)
T 2xe4_A 252 HVMGKLQS---------------------------------------EDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP 292 (751)
T ss_dssp EETTSCGG---------------------------------------GCEEEEECCCTTCEEEEEECTTSSEEEEEEECS
T ss_pred EECCCCch---------------------------------------hcEEEEecCCCceEEEEEECCCCCEEEEEecCC
Confidence 44332210 0111121 12233557899999998876553
Q ss_pred -CCcEEEEeCCCCc-ee--eecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC----CeEEEEeCCCCeEEEE-ee
Q 010759 358 -DVTAKIWNMKQDK-YV--HDLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFD----STVKLWDVELGKLLYS-LN 427 (502)
Q Consensus 358 -dg~i~iwd~~~~~-~~--~~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d----g~i~iwd~~~~~~~~~-~~ 427 (502)
...|.++|+.++. .. ..+. ......+++.|+..+ .+++....+ ..|..+++.++..... +.
T Consensus 293 ~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~---------~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li 363 (751)
T 2xe4_A 293 ETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS---------HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLV 363 (751)
T ss_dssp SCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT---------EEEEEECTTTCTTCEEEEEETTSTTCCCCEEE
T ss_pred CCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCC---------EEEEEeCCCCCCCcEEEEEcCCCcccceeeEE
Confidence 3467888887652 11 2222 233444555543322 233443333 3566777764211112 22
Q ss_pred CCCC--CEEEEEECCCCCEEEEEeCCCc--EEEEeC-------CCCeeEEEEe--cCCCEEEEEE----CCCCCEEEE
Q 010759 428 GHRE--PVYSLAFSPTGEYLASGSLDKS--MHIWSL-------KEGKIVKTYT--GNGGIFEVCW----NKEGDKIAA 488 (502)
Q Consensus 428 ~h~~--~v~~l~~spdg~~lasgs~Dg~--i~iw~~-------~~~~~~~~~~--~~~~i~~~~w----s~~g~~la~ 488 (502)
.+.. .+..+.+. .+.++++...++. |.++++ .+++.+..+. ....+..+.+ +++++.++.
T Consensus 364 ~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~ 440 (751)
T 2xe4_A 364 DHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRM 440 (751)
T ss_dssp CCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEE
T ss_pred CCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEE
Confidence 3333 34555554 2345566777775 455554 3444133332 2233455555 457764443
No 276
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.32 E-value=0.00034 Score=68.93 Aligned_cols=233 Identities=15% Similarity=0.156 Sum_probs=137.0
Q ss_pred EEEEEecCC--CCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc-eEEEEcCC---C-eEEEEEcCCCcc
Q 010759 257 IFSLKWNKK--GDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV-SFATSSTD---N-MIYVCKIGENRP 329 (502)
Q Consensus 257 V~~l~~~~~--~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d---~-~i~~~~~~~~~~ 329 (502)
..+|+|+|+ +..|+.+...+.|+.+|+.++....... .......+.+..+. .+++.... . .+...+......
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~ 219 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFT 219 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTC
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCee
Confidence 468899984 4455555544899999998776554332 22234444443322 33333211 1 122222111110
Q ss_pred -eeeecCCCcceeEEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeeccc--CCCcEEEEEEccCCCCCCCCCCcEEEEE
Q 010759 330 -IKTFAGHQGEVNCVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLRE--HSKEIYTIRWSPTGSGTNNPNQQLILAS 405 (502)
Q Consensus 330 -~~~~~~h~~~v~~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--~~~~i~~~~~sp~g~~~~~~~~~~~l~s 405 (502)
...+. .-.....++++| +|.++++-..++.|+.++..++.....+.. .......++|+|++. .+.++
T Consensus 220 ~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~--------~LYva 290 (433)
T 4hw6_A 220 ERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD--------WAYII 290 (433)
T ss_dssp CEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS--------EEEEE
T ss_pred cccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC--------EEEEE
Confidence 01111 123346688999 777777777788999999876655222211 122234689999874 24455
Q ss_pred EeCCCeEEEEeCC--CCeE--EEEeeCC---------------CCCEEEEEE---------CCCCCEEEEEeCCCcEEEE
Q 010759 406 ASFDSTVKLWDVE--LGKL--LYSLNGH---------------REPVYSLAF---------SPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 406 gs~dg~i~iwd~~--~~~~--~~~~~~h---------------~~~v~~l~~---------spdg~~lasgs~Dg~i~iw 457 (502)
-...+.|+.+++. ++.. ...+.+. -..-..+++ .++|.++++-...+.|+.+
T Consensus 291 d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~ 370 (433)
T 4hw6_A 291 YNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVL 370 (433)
T ss_dssp ETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEE
T ss_pred eCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEE
Confidence 5567889997765 2321 1122111 123577999 7888888887788899999
Q ss_pred eCCCCeeEEEEecC-------------------CCEEEEEEC-CCCCEEEEEECCCeEEEEEee
Q 010759 458 SLKEGKIVKTYTGN-------------------GGIFEVCWN-KEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 458 ~~~~~~~~~~~~~~-------------------~~i~~~~ws-~~g~~la~~~~~~~v~v~~~~ 501 (502)
+. +|.+. ++.+. ....+++++ ++|.++++=..++.|+.+++.
T Consensus 371 ~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 371 TP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp CT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 85 56543 33221 126789999 678777777889999998864
No 277
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.29 E-value=0.0017 Score=61.00 Aligned_cols=226 Identities=9% Similarity=0.004 Sum_probs=136.1
Q ss_pred CCcEEEEECCCce--eEeecCCCCCEEEEEecCCCCE-EEEecCCCeEEEEeccCcceeE-Eeee--cccCeEEEecCCC
Q 010759 234 DGQARIWSTNGDL--KCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTEEWKQ-QFEF--HSGPTLDVDWRNN 307 (502)
Q Consensus 234 dg~i~iw~~~~~~--~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~-~~~~--~~~~~~~~~~~~~ 307 (502)
...|+..++.+.. ...+......+.++.|++.+.. +.+-...+.|..+++....... .+.. ....-+.++|...
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g 91 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGE 91 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTT
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCC
Confidence 3577888876542 1111112234578999986555 4565667899999987653221 1111 1222356677777
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+++-...+.|.+++.........+.........+++.|.+..|+... ..+.|...++........+...-.....+
T Consensus 92 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~l~~Pngl 171 (318)
T 3sov_A 92 KLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINSEIYWPNGL 171 (318)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEE
T ss_pred eEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEECCCCCccEE
Confidence 7778877888999999876443333333445678999998765555544 25778888876432221112223345789
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIV 465 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~ 465 (502)
+++|++. .+..+-+..+.|..+|+........+.+.......|++.. +.++.+-...+.|..++..+|+..
T Consensus 172 avd~~~~--------~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 172 TLDYEEQ--------KLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGL 242 (318)
T ss_dssp EEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSC
T ss_pred EEeccCC--------EEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCce
Confidence 9988653 2444455678899999864322222232334567777753 345556566788999998777654
Q ss_pred EEE
Q 010759 466 KTY 468 (502)
Q Consensus 466 ~~~ 468 (502)
..+
T Consensus 243 ~~i 245 (318)
T 3sov_A 243 REI 245 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 278
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.29 E-value=0.0026 Score=59.69 Aligned_cols=212 Identities=13% Similarity=0.059 Sum_probs=127.3
Q ss_pred CeEEEEeccCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCC----CcceeeecCCCcceeEEEEcCCC
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGE----NRPIKTFAGHQGEVNCVKWDPTG 349 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~----~~~~~~~~~h~~~v~~v~~~p~~ 349 (502)
..|+..|+.+......+. ....+..+.|. .+..+++....+.|+.++... ......+...-.....+++.+.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 568888888776554332 22334556554 456677777788999988765 22222232222356788998654
Q ss_pred -CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeEEEEe-
Q 010759 350 -SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKLLYSL- 426 (502)
Q Consensus 350 -~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~~~~~- 426 (502)
+++++-...+.|.++++........+.........+++.|.+. .++.+.... +.|...++. |.....+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g--------~ly~~d~~~~~~I~~~~~d-G~~~~~~~ 159 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--------FMYWTDWGTPAKIKKGGLN-GVDIYSLV 159 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT--------EEEEEECSSSCEEEEEETT-SCCEEEEE
T ss_pred CeEEEEECCCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCC--------EEEEEccCCCCeEEEEcCC-CCCeEEEE
Confidence 5556666788999999875433222222334567888887543 233343333 678888875 3333333
Q ss_pred eCCCCCEEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEE-ec---CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 427 NGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTY-TG---NGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~-~~---~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
...-...+.|+++|++..|. +-+..+.|..+++.... ..++ .. -....++++. .+..+++-..++.|..+|
T Consensus 160 ~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~ 235 (316)
T 1ijq_A 160 TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAIFSAN 235 (316)
T ss_dssp CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEEEEEE
T ss_pred ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeEEEEe
Confidence 22234578999999876655 44556799999987433 2333 22 2346788884 355666666778887776
No 279
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.29 E-value=0.0015 Score=62.34 Aligned_cols=213 Identities=10% Similarity=0.016 Sum_probs=127.2
Q ss_pred CeEEEEeccCcceeEEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCC-CCEE
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPT-GSLL 352 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~-~~~l 352 (502)
..|+..++.......... ....+..++| ..+..+.+-...+.|+.++.........+.........+++.+. +.++
T Consensus 53 ~~I~~i~~~g~~~~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly 131 (349)
T 3v64_C 53 IDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLY 131 (349)
T ss_dssp SCEEEECTTSCCEEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEE
T ss_pred cceEEEeCCCCeeEEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEE
Confidence 457777776654433322 2223455555 45566667777888888888765543333333345678899875 4555
Q ss_pred EEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeEEEEe-eCCC
Q 010759 353 ASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKLLYSL-NGHR 430 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~~~~~-~~h~ 430 (502)
++-...+.|.+.++........+.........+++.|.+. .+..+-... +.|..+++.... ...+ ....
T Consensus 132 ~~d~~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g--------~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~ 202 (349)
T 3v64_C 132 WTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG--------TIYWTDWGNTPRIEASSMDGSG-RRIIADTHL 202 (349)
T ss_dssp EEETTTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTT--------EEEEEECSSSCEEEEEETTSCS-CEESCCSSC
T ss_pred EEcCCCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcC--------eEEEeccCCCCEEEEEeCCCCC-cEEEEECCC
Confidence 6666678899999875443322223334567888888543 244444444 778888876332 2222 2223
Q ss_pred CCEEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 431 EPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 431 ~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
...+.|+|+|++..|. +-+..+.|..+++........+. ......++++ ..+....+-..++.|..+|
T Consensus 203 ~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 272 (349)
T 3v64_C 203 FWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 272 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred CCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE-ECCEEEEecCCCCeEEEEE
Confidence 4568999998766554 44556789999986543322222 2334677887 4455555656677777665
No 280
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=98.29 E-value=0.0028 Score=59.82 Aligned_cols=269 Identities=9% Similarity=0.033 Sum_probs=141.2
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..+.+|.|.+.+..++ ++.+|.|. +....+.. ... ...........+.++.|.+ +..++ ++..
T Consensus 36 ~~~~~v~~~~~~~~~~-~G~~g~i~-~s~DgG~t-W~~------------~~~~~~~~~~~~~~i~~~~-~~~~~-~g~~ 98 (327)
T 2xbg_A 36 ATILDMSFIDRHHGWL-VGVNATLM-ETRDGGQT-WEP------------RTLVLDHSDYRFNSVSFQG-NEGWI-VGEP 98 (327)
T ss_dssp SCEEEEEESSSSCEEE-EETTTEEE-EESSTTSS-CEE------------CCCCCSCCCCEEEEEEEET-TEEEE-EEET
T ss_pred CcEEEEEECCCCcEEE-EcCCCeEE-EeCCCCCC-CeE------------CCCCCCCCCccEEEEEecC-CeEEE-EECC
Confidence 4689999988888777 45677653 22222221 000 0000011234578888876 44444 4555
Q ss_pred CcEEEEECCCcee-Eeec---CCCCCEEEEEecCCCCEEEEecCCCeEEE-EeccCcceeEEeeecccCeEEEecCCCce
Q 010759 235 GQARIWSTNGDLK-CTLS---KHKGPIFSLKWNKKGDYLLTGSCDKTAIV-WDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 235 g~i~iw~~~~~~~-~~~~---~h~~~V~~l~~~~~~~~l~sgs~D~~v~i-wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
+.|.. ..++... ..+. .+.+.++.+.+.+++..++++ .++.|.. .| ....|..........+..+.+..+..
T Consensus 99 g~i~~-S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~S~D-gG~tW~~~~~~~~~~~~~~~~~~~~~ 175 (327)
T 2xbg_A 99 PIMLH-TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYRTKD-SGKNWQALVQEAIGVMRNLNRSPSGE 175 (327)
T ss_dssp TEEEE-ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEEESS-TTSSEEEEECSCCCCEEEEEECTTSC
T ss_pred CeEEE-ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEEEcC-CCCCCEEeecCCCcceEEEEEcCCCc
Confidence 65443 3332211 1111 234567888877766655555 4555433 23 12234443333334556666655555
Q ss_pred EEEEcCCCeEEEEEcC---CCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeeccc----CCCcE
Q 010759 310 FATSSTDNMIYVCKIG---ENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLRE----HSKEI 382 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~---~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~----~~~~i 382 (502)
++..+..+.++.-.-. .-.++ -.+....+..+.+.+++.+++ ++.+|.+++++...++.-..+.. ....+
T Consensus 176 ~~~~g~~G~~~~S~d~gG~tW~~~--~~~~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~ 252 (327)
T 2xbg_A 176 YVAVSSRGSFYSTWEPGQTAWEPH--NRTTSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGF 252 (327)
T ss_dssp EEEEETTSSEEEEECTTCSSCEEE--ECCSSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCE
T ss_pred EEEEECCCcEEEEeCCCCCceeEC--CCCCCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcce
Confidence 5555555555554321 11222 123455788899999987664 55678887764332322222211 12357
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee---CCCCCEEEEEECCCCCEEEEEeCCCcEEEEe
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN---GHREPVYSLAFSPTGEYLASGSLDKSMHIWS 458 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~---~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~ 458 (502)
+.+.+.+++. +++.+ .+|.| ++..+.|+.-..+. .+...+++|.|.+++. +++++.+|.|.-++
T Consensus 253 ~~v~~~~~~~---------~~~~g-~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 253 LDLAYRTPNE---------VWLAG-GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp EEEEESSSSC---------EEEEE-STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred EEEEecCCCE---------EEEEe-CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 8888887653 44444 46766 34444443322332 2335678899976554 55667788777665
No 281
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.25 E-value=0.00087 Score=64.99 Aligned_cols=221 Identities=10% Similarity=0.011 Sum_probs=132.3
Q ss_pred EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEE
Q 010759 268 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKW 345 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~ 345 (502)
+|+.+. ...|+..++.......... ....+..+.|. .+..+++-...+.|+.++.........+.........+++
T Consensus 89 ~l~~~~-~~~I~~i~~~~~~~~~~~~-~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glav 166 (386)
T 3v65_B 89 VLLFAN-RIDIRQVLPHRSEYTLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAV 166 (386)
T ss_dssp EEEEEC-BSCEEEECTTSCCCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEE
T ss_pred eeEeec-CccceeeccCCCcEEEEec-CCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEE
Confidence 444333 3568888887665443332 22334555553 5566677777888998888765543333333334567888
Q ss_pred cCC-CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeEE
Q 010759 346 DPT-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKLL 423 (502)
Q Consensus 346 ~p~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~~ 423 (502)
.+. +.++++-...+.|.+.++........+.........+++.|.+. .+..+-... +.|..+++......
T Consensus 167 d~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g--------~ly~td~~~~~~I~r~~~dG~~~~ 238 (386)
T 3v65_B 167 DWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEG--------TIYWTDWGNTPRIEASSMDGSGRR 238 (386)
T ss_dssp ETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTT--------EEEEEECSSSCEEEEEETTSCSCE
T ss_pred EeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCC--------eEEEeccCCCCEEEEEeCCCCCcE
Confidence 875 45556666677888888765433322323334567888887653 233444344 77888887643322
Q ss_pred EEeeCCCCCEEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 424 YSLNGHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 424 ~~~~~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
..+.......+.|+|+|++..|. +-+..+.|..+++........+. +.....++++ ..+..+.+-..++.|..+|
T Consensus 239 ~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav-~~~~ly~td~~~~~V~~~~ 315 (386)
T 3v65_B 239 IIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV-FEDSLYWTDWHTKSINSAN 315 (386)
T ss_dssp EEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE-ETTEEEEEETTTTEEEEEE
T ss_pred EEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE-ECCEEEEeeCCCCeEEEEE
Confidence 22222334568999998766554 44556789999986543332232 2345678888 4455666666777887776
No 282
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.18 E-value=0.0032 Score=61.29 Aligned_cols=221 Identities=11% Similarity=0.023 Sum_probs=131.6
Q ss_pred EEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCC----cceeeecCCCccee
Q 010759 268 YLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVN 341 (502)
Q Consensus 268 ~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~ 341 (502)
+|+.+ ....|+..++.......... ....+..++|. .+..+.+-...+.|+.+++... .....+........
T Consensus 85 ~ll~~-~~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFT-NRHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEE-ETTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEe-ccceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 34333 34688888887765544332 23344555554 5666777777888888887652 22223332344677
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCC
Q 010759 342 CVKWDP-TGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVEL 419 (502)
Q Consensus 342 ~v~~~p-~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~ 419 (502)
.+++.+ .++++++-...+.|.+.++........+.........|++.|.+. .+..+- +..+.|...++..
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g--------~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG--------FMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTT--------EEEEEECSSSCCEEEEETTS
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccC--------eEEEEeCCCCCEEEEEeCCC
Confidence 899987 455666666788999999876544333333344567888888543 233332 2346788888764
Q ss_pred CeEEEEeeCCCCCEEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeE
Q 010759 420 GKLLYSLNGHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 420 ~~~~~~~~~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
......+.......+.|+++|++..|..+ +..+.|..+++........... -....+++. ..+..+.+-..++.|
T Consensus 235 ~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v-~~~~lywtd~~~~~V 313 (400)
T 3p5b_L 235 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV-FEDKVFWTDIINEAI 313 (400)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE-ETTEEEEEESSSCSE
T ss_pred CccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE-eCCEEEEecCCCCeE
Confidence 33322223333567899999887766554 4567899999865443333332 234567777 334455566667777
Q ss_pred EEEE
Q 010759 496 CVLD 499 (502)
Q Consensus 496 ~v~~ 499 (502)
..+|
T Consensus 314 ~~~~ 317 (400)
T 3p5b_L 314 FSAN 317 (400)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7766
No 283
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.18 E-value=0.0029 Score=56.97 Aligned_cols=200 Identities=9% Similarity=0.152 Sum_probs=125.7
Q ss_pred eecCCCCCEEEEEecCCCCEEEE-ecCCCeEEEEeccCcceeEEeeecc-cCeEEEecCCCceE-EEEcCCCeEEEEEcC
Q 010759 249 TLSKHKGPIFSLKWNKKGDYLLT-GSCDKTAIVWDVKTEEWKQQFEFHS-GPTLDVDWRNNVSF-ATSSTDNMIYVCKIG 325 (502)
Q Consensus 249 ~~~~h~~~V~~l~~~~~~~~l~s-gs~D~~v~iwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~d~~i~~~~~~ 325 (502)
.+.+-...+.+++|+|+++.|++ ...++.|...|+. ++..+.+.... ...-.+.+..+..| ++.-.++.++++.+.
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34555668999999998776654 6678889999987 77777765432 34556666555555 455567788888876
Q ss_pred CCcce---eeec------CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCC---Cceeeec-------ccCCCcEEEEE
Q 010759 326 ENRPI---KTFA------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQ---DKYVHDL-------REHSKEIYTIR 386 (502)
Q Consensus 326 ~~~~~---~~~~------~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~---~~~~~~~-------~~~~~~i~~~~ 386 (502)
....+ .... ........++|+|.++.|+++.......||.+.. ...+..+ ........+++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~ 179 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAE 179 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEE
Confidence 54422 1111 1234578999999997777676655555655431 1111111 01123456778
Q ss_pred EccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe--eC-C------CCCEEEEEECCCCCEEEEEeCCCcEEEE
Q 010759 387 WSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL--NG-H------REPVYSLAFSPTGEYLASGSLDKSMHIW 457 (502)
Q Consensus 387 ~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~--~~-h------~~~v~~l~~spdg~~lasgs~Dg~i~iw 457 (502)
+.|... .+++.......|..+|.. ++.+..+ .. . -..-..|+|.|+|++.++ |.-..++.|
T Consensus 180 ~dp~tg--------~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE~n~~y~f 249 (255)
T 3qqz_A 180 FNQQKN--------TLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SEPNRFYRF 249 (255)
T ss_dssp EETTTT--------EEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ETTTEEEEE
T ss_pred EcCCCC--------eEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cCCceEEEE
Confidence 877543 355566677889999976 5555443 31 1 124588999999985555 777777777
Q ss_pred eC
Q 010759 458 SL 459 (502)
Q Consensus 458 ~~ 459 (502)
..
T Consensus 250 ~~ 251 (255)
T 3qqz_A 250 TP 251 (255)
T ss_dssp EC
T ss_pred Ee
Confidence 54
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.15 E-value=0.002 Score=63.40 Aligned_cols=153 Identities=14% Similarity=0.150 Sum_probs=89.0
Q ss_pred ceeEEEECC-CCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 156 EVCACAWSP-AGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 156 ~V~~~~~sp-d~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
....++|+| ++..|+.+...+.|+.+|+.++.. .. +.. .......++|+++|++|+.+...
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v-----------~~---~~~----~~~~P~~ia~d~~G~~lyvad~~ 199 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYV-----------ST---VYS----GLSKVRTICWTHEADSMIITNDQ 199 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEE-----------EE---EEC----CCSCEEEEEECTTSSEEEEEECC
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEE-----------EE---Eec----CCCCcceEEEeCCCCEEEEEeCC
Confidence 457899998 455565555447888888765321 11 111 23457899999999966666542
Q ss_pred -C----cEEEEECCCcee--EeecCCCCCEEEEEecC-CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 235 -G----QARIWSTNGDLK--CTLSKHKGPIFSLKWNK-KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 235 -g----~i~iw~~~~~~~--~~~~~h~~~V~~l~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
+ .+.+.+..+... ..+... ....+++++| ++..+++-...+.|..+++.++.....+
T Consensus 200 ~~~~~~~v~~~~~~g~~~~~~~l~~~-~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~-------------- 264 (430)
T 3tc9_A 200 NNNDRPNNYILTRESGFKVITELTKG-QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLF-------------- 264 (430)
T ss_dssp SCTTSEEEEEEEGGGTSCSEEEEEEC-SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEE--------------
T ss_pred CCcccceEEEEeCCCceeeeeeeccC-CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEE--------------
Confidence 2 233444443222 222222 2236778899 6666666667788888887654321100
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCC-EEEEEeCCCcEEEEeCC
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGS-LLASCSDDVTAKIWNMK 367 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~sgs~dg~i~iwd~~ 367 (502)
.. +.......++|+|+|+ ++++-...+.|..++..
T Consensus 265 -------------------------~~-~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 265 -------------------------TI-QDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp -------------------------EC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred -------------------------Ec-CCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 00 0112345788888888 45555567778887654
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.14 E-value=0.0045 Score=60.89 Aligned_cols=233 Identities=9% Similarity=0.044 Sum_probs=128.3
Q ss_pred CeEEEEECCC--CCEEEEEECCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC---Ce-EEEEeccCcce
Q 010759 215 DVTTLDWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD---KT-AIVWDVKTEEW 288 (502)
Q Consensus 215 ~V~~l~~s~~--~~~l~sg~~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D---~~-v~iwd~~~~~~ 288 (502)
....++|.|+ ...|+.+...+.|+.++........+........+++|+++++.+++.... .. +...+.. +.+
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~-~~~ 218 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRA-SGF 218 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGG-GTT
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECC-CCe
Confidence 4568999984 334444444488999998655555555445567999999999944444321 22 3333332 221
Q ss_pred e--EEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCCcceeee-c-CCCcceeEEEEcCCCC-EEEEEeCCCcE
Q 010759 289 K--QQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGENRPIKTF-A-GHQGEVNCVKWDPTGS-LLASCSDDVTA 361 (502)
Q Consensus 289 ~--~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~~~~~~~-~-~h~~~v~~v~~~p~~~-~l~sgs~dg~i 361 (502)
. ..+. .......+.+ .....+++...++.|+.++...+.....+ . +....-..++|+|+++ ++++-...+.|
T Consensus 219 ~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I 297 (433)
T 4hw6_A 219 TERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCI 297 (433)
T ss_dssp CCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEE
T ss_pred ecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEE
Confidence 1 1111 1111222233 23445556666778888887655431222 1 1122234699999998 55566667889
Q ss_pred EEEeCC--CCcee--eecccC---------------CCcEEEEEE---------ccCCCCCCCCCCcEEEEEEeCCCeEE
Q 010759 362 KIWNMK--QDKYV--HDLREH---------------SKEIYTIRW---------SPTGSGTNNPNQQLILASASFDSTVK 413 (502)
Q Consensus 362 ~iwd~~--~~~~~--~~~~~~---------------~~~i~~~~~---------sp~g~~~~~~~~~~~l~sgs~dg~i~ 413 (502)
+.+++. ++... ..+.+. -.....+++ .+.+. +.++-...+.|+
T Consensus 298 ~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~---------lyvaD~~n~~I~ 368 (433)
T 4hw6_A 298 YRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD---------FYFCDRDSHTVR 368 (433)
T ss_dssp EEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE---------EEEEETTTTEEE
T ss_pred EEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc---------EEEEECCCCEEE
Confidence 998765 22211 111110 112455666 34332 444555667888
Q ss_pred EEeCCCCeEEEEeeCC------------------CCCEEEEEEC-CCCCEEEEEeCCCcEEEEeCC
Q 010759 414 LWDVELGKLLYSLNGH------------------REPVYSLAFS-PTGEYLASGSLDKSMHIWSLK 460 (502)
Q Consensus 414 iwd~~~~~~~~~~~~h------------------~~~v~~l~~s-pdg~~lasgs~Dg~i~iw~~~ 460 (502)
.++. .|... ++.+. -..-..|+++ ++|.++++=...++|+.++++
T Consensus 369 ~~~~-~G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 369 VLTP-EGRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EECT-TSEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EECC-CCCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 8885 45433 33221 1125678888 566666666666777777654
No 286
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.09 E-value=0.0066 Score=64.22 Aligned_cols=226 Identities=12% Similarity=0.069 Sum_probs=136.4
Q ss_pred CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCE-EEEecCCCeEEEEeccCc----ceeEEee--ecccCeEEEecCC
Q 010759 234 DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDY-LLTGSCDKTAIVWDVKTE----EWKQQFE--FHSGPTLDVDWRN 306 (502)
Q Consensus 234 dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~-l~sgs~D~~v~iwd~~~~----~~~~~~~--~~~~~~~~~~~~~ 306 (502)
...|+..++.+.....+......+.+|+|++.... +++-...+.|+.+++... .....+. .....-++++|..
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~ 482 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 482 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecC
Confidence 35677777765444444444566789999986555 456666788999988653 2222222 1223346778888
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCceeeecccCCCcEEE
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DD-VTAKIWNMKQDKYVHDLREHSKEIYT 384 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~d-g~i~iwd~~~~~~~~~~~~~~~~i~~ 384 (502)
...+++-...+.|.+.++........+.........|++.|.+..|+... .. +.|...++........+.........
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l~~P~G 562 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNG 562 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEEECSSCSCEEE
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceEEEEeCCCCCceE
Confidence 88888888889999999876544333333445678999999765555444 23 67888888654433333333356778
Q ss_pred EEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeC--CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC
Q 010759 385 IRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNG--HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG 462 (502)
Q Consensus 385 ~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~--h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~ 462 (502)
|++.+.+. .+..+-...+.|...++........+.. ......+|++..+ .++++-...+.|...+..+|
T Consensus 563 LavD~~~~--------~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~-~lYwtD~~~~~I~~~dk~tG 633 (791)
T 3m0c_C 563 ITLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTG 633 (791)
T ss_dssp EEEETTTT--------EEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT-EEEEEETTTTEEEEEETTTC
T ss_pred EEEecCCC--------eEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC-EEEEEECCCCEEEEEeCCCC
Confidence 88886553 2333344567899998864433323332 2233456776432 44455556688888887777
Q ss_pred eeEEEE
Q 010759 463 KIVKTY 468 (502)
Q Consensus 463 ~~~~~~ 468 (502)
+.+.++
T Consensus 634 ~~~~~l 639 (791)
T 3m0c_C 634 SDVNLL 639 (791)
T ss_dssp CCCEEE
T ss_pred cceEEe
Confidence 654444
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=98.06 E-value=0.0042 Score=61.54 Aligned_cols=240 Identities=13% Similarity=0.164 Sum_probs=139.3
Q ss_pred CeEEEEECCC--CCEEEEEECCCcEEEEECCCceeEeecCC----CCCEEEEEe-------cCCCCEEEEecCCC-e---
Q 010759 215 DVTTLDWNGE--GTLLATGSYDGQARIWSTNGDLKCTLSKH----KGPIFSLKW-------NKKGDYLLTGSCDK-T--- 277 (502)
Q Consensus 215 ~V~~l~~s~~--~~~l~sg~~dg~i~iw~~~~~~~~~~~~h----~~~V~~l~~-------~~~~~~l~sgs~D~-~--- 277 (502)
....|+|.|. ++++++-...+.|++.|.....+..+..- ......|+| ++++++|+.+...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 4678999983 44444444456788888877655554322 224789999 99998666665443 1
Q ss_pred ---EEEEeccC-cceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcC-CCCEE
Q 010759 278 ---AIVWDVKT-EEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDP-TGSLL 352 (502)
Q Consensus 278 ---v~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~l 352 (502)
|.+.+... +.+.. .. +. ..+..+. ....++++| ++.++
T Consensus 220 ~~~V~~i~r~~~G~~~~--------------~~---------~~----------~~v~~~~----~p~giavdp~~g~LY 262 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDD--------------RS---------DI----------QLIAAYK----QCNGATIHPINGELY 262 (496)
T ss_dssp EEEEEEEECCTTSCCST--------------TS---------CE----------EEEEEES----CCCCEEECTTTCCEE
T ss_pred CceEEEEecCCCCceee--------------cc---------cc----------eeeccCC----CceEEEEcCCCCeEE
Confidence 33433211 11100 00 00 0011111 234678899 45666
Q ss_pred EEEeCCCcEEEEeCC-------CCce-----------eeec-c-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeE
Q 010759 353 ASCSDDVTAKIWNMK-------QDKY-----------VHDL-R-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 412 (502)
Q Consensus 353 ~sgs~dg~i~iwd~~-------~~~~-----------~~~~-~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i 412 (502)
++-..++.|..+|+. ++.. ...+ . ......+.++|+|+|. .+.++-+....|
T Consensus 263 vtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~--------~lYvaD~~~h~I 334 (496)
T 3kya_A 263 FNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGK--------YAYFGVINNHYF 334 (496)
T ss_dssp EEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSS--------EEEEEETTTTEE
T ss_pred EEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCC--------EEEEEeCCCCEE
Confidence 677778889999987 4432 1111 1 1223457899999885 234444567788
Q ss_pred EEEeC--CCCeE--EEEeeCC------C---------CCEE-EEEEC-------CCCCEEEEEeCCCcEEEEeCCCCeeE
Q 010759 413 KLWDV--ELGKL--LYSLNGH------R---------EPVY-SLAFS-------PTGEYLASGSLDKSMHIWSLKEGKIV 465 (502)
Q Consensus 413 ~iwd~--~~~~~--~~~~~~h------~---------~~v~-~l~~s-------pdg~~lasgs~Dg~i~iw~~~~~~~~ 465 (502)
+.++. ..+.. ...+.+. . ..-. .++.. ++|.++++=....+|+.++ .+|. +
T Consensus 335 ~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~-~~G~-v 412 (496)
T 3kya_A 335 MRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVT-PEGI-V 412 (496)
T ss_dssp EEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCEEEEEEEGGGTEEEEEC-TTCB-E
T ss_pred EEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCCeEEEEECCCCEEEEEe-CCCC-E
Confidence 88654 33332 0122111 0 1233 44554 5677777777788999998 4564 3
Q ss_pred EEEecC----------------C---------CEEEEEECCC-CCEEEEEECCCeEEEEEee
Q 010759 466 KTYTGN----------------G---------GIFEVCWNKE-GDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 466 ~~~~~~----------------~---------~i~~~~ws~~-g~~la~~~~~~~v~v~~~~ 501 (502)
.++.+. + ...+|+++++ |.++++=..|..|+.+++.
T Consensus 413 ~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~lyVaD~~N~rIrki~~~ 474 (496)
T 3kya_A 413 STYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEMFYVHDQVGHTIRTISME 474 (496)
T ss_dssp EEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTEEEEEETTTTEEEEEEEC
T ss_pred EEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCEEEEEeCCCCEEEEEECC
Confidence 444321 1 2568999997 8777777889999988764
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.03 E-value=0.0028 Score=59.45 Aligned_cols=192 Identities=17% Similarity=0.258 Sum_probs=121.9
Q ss_pred CCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCc---------eEEEEcC--CCeEEEEEcC-CCcceee
Q 010759 265 KGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNV---------SFATSST--DNMIYVCKIG-ENRPIKT 332 (502)
Q Consensus 265 ~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--d~~i~~~~~~-~~~~~~~ 332 (502)
....++.....+-+.+||+ +++.++.+.. +.+..++.+.+. .+++.-. +++|.++++. ...++..
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~ 115 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQS 115 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEE
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceee
Confidence 3456676677788999999 7777766643 445555544332 2344445 6899999884 2223444
Q ss_pred ecC------CC-cceeEEEE--cCC-CC-EEEEEeCCCcEEEEeCC-------CCceeeecccCCCcEEEEEEccCCCCC
Q 010759 333 FAG------HQ-GEVNCVKW--DPT-GS-LLASCSDDVTAKIWNMK-------QDKYVHDLREHSKEIYTIRWSPTGSGT 394 (502)
Q Consensus 333 ~~~------h~-~~v~~v~~--~p~-~~-~l~sgs~dg~i~iwd~~-------~~~~~~~~~~~~~~i~~~~~sp~g~~~ 394 (502)
+.. .. ..+..+|+ +|. +. +++....+|.+..|++. +.+.+++|... ..+-.+...+...
T Consensus 116 i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg-sq~EgcvvDd~~g-- 192 (355)
T 3amr_A 116 MTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN-SQTEGMAADDEYG-- 192 (355)
T ss_dssp CSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS-SCEEEEEEETTTT--
T ss_pred ccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC-CCcceEEEcCCCC--
Confidence 421 11 45666777 774 44 57788888999999872 33456666543 4566666666543
Q ss_pred CCCCCcEEEEEEeCCCeEEEEeCC-----CCeEEEEee-CC-CCCEEEEEE--CCCCC-EEEEEe-CCCcEEEEeCC-CC
Q 010759 395 NNPNQQLILASASFDSTVKLWDVE-----LGKLLYSLN-GH-REPVYSLAF--SPTGE-YLASGS-LDKSMHIWSLK-EG 462 (502)
Q Consensus 395 ~~~~~~~~l~sgs~dg~i~iwd~~-----~~~~~~~~~-~h-~~~v~~l~~--spdg~-~lasgs-~Dg~i~iw~~~-~~ 462 (502)
.|..+-.+.-|..++.+ +++.+..+. ++ ...+..|++ .++++ ||++++ .+.+..+|+.. +.
T Consensus 193 -------~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~ 265 (355)
T 3amr_A 193 -------RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKN 265 (355)
T ss_dssp -------EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTC
T ss_pred -------eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCC
Confidence 56778888666666654 345665552 22 236888877 56666 666555 67899999996 67
Q ss_pred eeEEEEe
Q 010759 463 KIVKTYT 469 (502)
Q Consensus 463 ~~~~~~~ 469 (502)
+.+..|.
T Consensus 266 ~~vg~f~ 272 (355)
T 3amr_A 266 KYVADFR 272 (355)
T ss_dssp CEEEEEE
T ss_pred cEEEEEE
Confidence 7777774
No 289
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.99 E-value=0.002 Score=60.40 Aligned_cols=181 Identities=14% Similarity=0.229 Sum_probs=119.0
Q ss_pred eEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCC----C---E-EEEEeC--CCcEEEEeCC--CCceeeecc
Q 010759 309 SFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTG----S---L-LASCSD--DVTAKIWNMK--QDKYVHDLR 376 (502)
Q Consensus 309 ~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~----~---~-l~sgs~--dg~i~iwd~~--~~~~~~~~~ 376 (502)
.++.....+-++++++ .++.++.+.. +.++.|..-|.- + + +++... +++|++|++. ++ .+..+.
T Consensus 42 ~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~l~~i~ 117 (355)
T 3amr_A 42 KLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-TLQSMT 117 (355)
T ss_dssp EEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-CEEECS
T ss_pred EEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-ceeecc
Confidence 3555666788999999 6777777653 567778777632 2 2 444444 6899999773 33 244332
Q ss_pred c------CC-CcEEEEEE--ccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC-------CCeEEEEeeCCCCCEEEEEECC
Q 010759 377 E------HS-KEIYTIRW--SPTGSGTNNPNQQLILASASFDSTVKLWDVE-------LGKLLYSLNGHREPVYSLAFSP 440 (502)
Q Consensus 377 ~------~~-~~i~~~~~--sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-------~~~~~~~~~~h~~~v~~l~~sp 440 (502)
. .. ..++.+++ +|.+ +..+++....+|.+..|++. +.+.+.++.- ...+..++..+
T Consensus 118 ~~~~pv~t~~~~pyGlcly~~~~~-------g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~l-gsq~EgcvvDd 189 (355)
T 3amr_A 118 DPDHPIATAINEVYGFTLYHSQKT-------GKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKM-NSQTEGMAADD 189 (355)
T ss_dssp CTTSCEECCCSSCCCEEEEECTTT-------CCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEEC-SSCEEEEEEET
T ss_pred ccccCcCCCCCCeeEEEEEecCCC-------CcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecC-CCCcceEEEcC
Confidence 1 11 44566666 4532 23467777788999999882 3355666653 35688899999
Q ss_pred CCCEEEEEeCCCcEEEEeCC-----CCeeEEEEecC---CCEEEEEE--CCCCC-EEEEEE-CCCeEEEEEee
Q 010759 441 TGEYLASGSLDKSMHIWSLK-----EGKIVKTYTGN---GGIFEVCW--NKEGD-KIAACF-ANHTVCVLDFR 501 (502)
Q Consensus 441 dg~~lasgs~Dg~i~iw~~~-----~~~~~~~~~~~---~~i~~~~w--s~~g~-~la~~~-~~~~v~v~~~~ 501 (502)
....|..+-.+.-|..++.+ +++++..+... ..+-.|+. .++|+ +|++++ .+.++.|||.+
T Consensus 190 ~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 190 EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 88899999998777777754 35566555332 35777777 67777 555555 57789999863
No 290
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.98 E-value=0.008 Score=56.37 Aligned_cols=216 Identities=8% Similarity=0.002 Sum_probs=124.5
Q ss_pred CCeEEEEeccCcc--eeEEeeecccCeEEEecC--CCceEEEEcCCCeEEEEEcCCCcce-eeecCCCcceeEEEEcCC-
Q 010759 275 DKTAIVWDVKTEE--WKQQFEFHSGPTLDVDWR--NNVSFATSSTDNMIYVCKIGENRPI-KTFAGHQGEVNCVKWDPT- 348 (502)
Q Consensus 275 D~~v~iwd~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~d~~i~~~~~~~~~~~-~~~~~h~~~v~~v~~~p~- 348 (502)
...|+..++.... ....+. .......++|. .+..+.+-...+.|+.++....... ..+...-.....+++.+.
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~-~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~ 90 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVG-GLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLG 90 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEE-EEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTT
T ss_pred cCeEEEEECCCCceEEEEEec-CCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCC
Confidence 4678888887653 211111 12234455664 4666777777888888887655321 122222234667888874
Q ss_pred CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEE-eCCCeEEEEeCCCCeEEEEee
Q 010759 349 GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASA-SFDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 349 ~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sg-s~dg~i~iwd~~~~~~~~~~~ 427 (502)
+.++++-...+.|.++++........+.........+++.|.+. .+..+- +..+.|...++........+.
T Consensus 91 g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g--------~ly~td~~~~~~I~r~~~dG~~~~~~~~ 162 (318)
T 3sov_A 91 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSG--------FMYWTDWGEVPKIERAGMDGSSRFIIIN 162 (318)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGT--------EEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred CeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCC--------EEEEEecCCCCEEEEEEcCCCCeEEEEE
Confidence 55566666778999999875433222223334567888887543 133332 235778888876322211222
Q ss_pred CCCCCEEEEEECCCCCEEE-EEeCCCcEEEEeCCCCeeEEEEe-cCCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 428 GHREPVYSLAFSPTGEYLA-SGSLDKSMHIWSLKEGKIVKTYT-GNGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~la-sgs~Dg~i~iw~~~~~~~~~~~~-~~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
..-..-+.|+|+|++..|. +=+..+.|..+++.......... ......+++... +..+.+-..++.|..+|.
T Consensus 163 ~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~ 236 (318)
T 3sov_A 163 SEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE-DILYWTDWSTHSILACNK 236 (318)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET-TEEEEEETTTTEEEEEET
T ss_pred CCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC-CEEEEEecCCCeEEEEEC
Confidence 2234568999999766554 44567889999986433222222 233467777743 345555556677777663
No 291
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.97 E-value=0.0064 Score=57.99 Aligned_cols=59 Identities=24% Similarity=0.319 Sum_probs=39.4
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe----e--EEE-EecCCCEEEEEECCCCCEEEEEEC
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK----I--VKT-YTGNGGIFEVCWNKEGDKIAACFA 491 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~----~--~~~-~~~~~~i~~~~ws~~g~~la~~~~ 491 (502)
....++| .+|.++++.-..+.|...++.... . ... +.....+.++++.|||.++++...
T Consensus 269 ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~ 334 (352)
T 2ism_A 269 PPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSN 334 (352)
T ss_dssp CEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECS
T ss_pred CCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeC
Confidence 4567888 567777766667788887775432 1 122 233467899999999987776643
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.94 E-value=0.00083 Score=62.44 Aligned_cols=157 Identities=13% Similarity=0.121 Sum_probs=106.8
Q ss_pred CCCcceeEEEEcCCCCEEEEEe-CCCcEEEEeCCCCceeee-ccc----C--CCcEEEEEE---ccCCCCCCCCCCcEEE
Q 010759 335 GHQGEVNCVKWDPTGSLLASCS-DDVTAKIWNMKQDKYVHD-LRE----H--SKEIYTIRW---SPTGSGTNNPNQQLIL 403 (502)
Q Consensus 335 ~h~~~v~~v~~~p~~~~l~sgs-~dg~i~iwd~~~~~~~~~-~~~----~--~~~i~~~~~---sp~g~~~~~~~~~~~l 403 (502)
.....-.+++|++....|..++ ..++|..|+...+..... +.. . ...+..+.| .|.+. ++
T Consensus 10 ~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~gr---------L~ 80 (334)
T 2p9w_A 10 VKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKR---------LF 80 (334)
T ss_dssp CTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCE---------EE
T ss_pred CcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCc---------EE
Confidence 3344566899988655555555 789999999875543322 211 0 113578888 57654 44
Q ss_pred EEEe-------------CCCeEEEEeCC---CCeEEEEee--CC-----------CCCEEEEEECCCCCEEEEEeCC-Cc
Q 010759 404 ASAS-------------FDSTVKLWDVE---LGKLLYSLN--GH-----------REPVYSLAFSPTGEYLASGSLD-KS 453 (502)
Q Consensus 404 ~sgs-------------~dg~i~iwd~~---~~~~~~~~~--~h-----------~~~v~~l~~spdg~~lasgs~D-g~ 453 (502)
++.. .+..|..+|+. +++.++... .. ....++++..++|+..++++.- +.
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~ 160 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPA 160 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCE
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCe
Confidence 4333 26789999999 787766543 11 1248899999999999999988 88
Q ss_pred EEEEeCCCCeeEEEEe-c------CCCEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 454 MHIWSLKEGKIVKTYT-G------NGGIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 454 i~iw~~~~~~~~~~~~-~------~~~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
|...+.... .+..+. . ..+.+.++++|+|+.|++....|.+..+|++
T Consensus 161 I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~ 214 (334)
T 2p9w_A 161 IARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVS 214 (334)
T ss_dssp EEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECS
T ss_pred EEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCC
Confidence 877776543 333321 1 1236799999999998888779999998864
No 293
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.023 Score=56.33 Aligned_cols=113 Identities=9% Similarity=0.088 Sum_probs=65.8
Q ss_pred eeEEEECCC-C-CEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEE-------CCCCCE
Q 010759 157 VCACAWSPA-G-SLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDW-------NGEGTL 227 (502)
Q Consensus 157 V~~~~~spd-~-~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~-------s~~~~~ 227 (502)
...|+|+|. + +++++-...+.|++.|+.++. +..+. ............++| +++|.+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~-----------v~~l~---~~~~~~~~~p~~ia~~~~~~~~d~~G~~ 206 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRM-----------LSSPL---NINTIPTNRIRSIAFNKKIEGYADEAEY 206 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTE-----------EEEEE---CCTTSSCSBEEEEEECCCBTTTBCTTCE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCE-----------EEEEE---ccCccccCCCcEEEEeecccccCCCCCE
Confidence 568999993 4 444544444678888876542 11111 111112235788999 999997
Q ss_pred EEEEECCC-c------EEEEECCC--cee-----EeecCCCCCEEEEEecCC-CCEEEEecCCCeEEEEecc
Q 010759 228 LATGSYDG-Q------ARIWSTNG--DLK-----CTLSKHKGPIFSLKWNKK-GDYLLTGSCDKTAIVWDVK 284 (502)
Q Consensus 228 l~sg~~dg-~------i~iw~~~~--~~~-----~~~~~h~~~V~~l~~~~~-~~~l~sgs~D~~v~iwd~~ 284 (502)
|+.+...+ . |.+.+... ... ..+..... ..+++++|+ +..+++-..++.|..+|+.
T Consensus 207 lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~-p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 207 MIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYKQ-CNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp EEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEESC-CCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred EEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCCC-ceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 77766554 2 55554332 221 12222222 256788994 4556667778889999987
No 294
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.84 E-value=0.017 Score=61.12 Aligned_cols=216 Identities=10% Similarity=-0.007 Sum_probs=125.6
Q ss_pred CCeEEEEeccCcceeEEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCCC----cceeeecCCCcceeEEEEcCC
Q 010759 275 DKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGEN----RPIKTFAGHQGEVNCVKWDPT 348 (502)
Q Consensus 275 D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~~----~~~~~~~~h~~~v~~v~~~p~ 348 (502)
...|+..++....+...... ...+..+++ ..+..|++-...+.|+.+++... .....+.........|++.+.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~-~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~ 481 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPN-LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 481 (791)
T ss_dssp BSSEEEECTTSCCCEEEECS-CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETT
T ss_pred ccceeEeeccCCcceeeecC-CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeec
Confidence 45678888776654443322 233444444 45667777777888888887652 222233323455678999877
Q ss_pred C-CEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee
Q 010759 349 G-SLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN 427 (502)
Q Consensus 349 ~-~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~ 427 (502)
+ +++++-...+.|.+.++........+.........|++.|... .+|++-.+..+.|...++........+.
T Consensus 482 ~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g-------~LYwtD~g~~~~I~~~~~dG~~~~~lv~ 554 (791)
T 3m0c_C 482 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHG-------FMYWTDWGTPAKIKKGGLNGVDIYSLVT 554 (791)
T ss_dssp TTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTT-------EEEEEECSSSCEEEEEETTSCCEEEEEC
T ss_pred CCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCC-------CEEEecCCCCCeEEEEecCCCceEEEEe
Confidence 6 4556666778999999875543333333344578899888643 1233222233678888887443333333
Q ss_pred CCCCCEEEEEECCCCCEEEEE-eCCCcEEEEeCCCCeeEEEEecC---CCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 428 GHREPVYSLAFSPTGEYLASG-SLDKSMHIWSLKEGKIVKTYTGN---GGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 428 ~h~~~v~~l~~spdg~~lasg-s~Dg~i~iw~~~~~~~~~~~~~~---~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
......+.|++++.+..|..+ ...+.|..+++............ ...++|+... +.++++-..++.|..+|
T Consensus 555 ~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~~~I~~~d 629 (791)
T 3m0c_C 555 ENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-DKVFWTDIINEAIFSAN 629 (791)
T ss_dssp SSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-TEEEEEETTTTEEEEEE
T ss_pred CCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeC-CEEEEEECCCCEEEEEe
Confidence 334568999999876666554 45678999998654443333321 2356666632 23344444566676655
No 295
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.00018 Score=75.57 Aligned_cols=226 Identities=12% Similarity=0.068 Sum_probs=128.0
Q ss_pred CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEe-cCCCeEEEEeccC----cceeEEee--ecccCeEEEecCCC
Q 010759 235 GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKT----EEWKQQFE--FHSGPTLDVDWRNN 307 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sg-s~D~~v~iwd~~~----~~~~~~~~--~~~~~~~~~~~~~~ 307 (502)
+.|+..++.+.....+......+.+|+|++.+..|+.+ ...+.|+.+++.+ ......+. .....-+.++|...
T Consensus 386 ~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g 465 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHS 465 (699)
T ss_dssp TC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSS
T ss_pred cceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCC
Confidence 56777776654333333233445788999877666554 4567899999875 22111111 11112345566666
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe-CC-CcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS-DD-VTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs-~d-g~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+++-...+.|.++++........+.........++++|.+.+|+... .. +.|..+++........+.........|
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~l~~~~l~~PnGl 545 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQWPNGI 545 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCEESCSSCSSCCCE
T ss_pred cEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeEEEeCCCCCccEE
Confidence 6777777778898888765543333332234567889998655444433 22 677777765332211111122334578
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEee--CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLN--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK 463 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~ 463 (502)
+|+|++. .+.++-+..+.|..+++........+. ........|++..+ .++++....+.|..++..+|+
T Consensus 546 avd~~~~--------~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 546 TLDLLSG--------RLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGS 616 (699)
T ss_dssp EECTTTC--------CEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEE
T ss_pred EEeccCC--------EEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCC
Confidence 8887653 244455567889999986432222221 11222345566544 445555667899999988888
Q ss_pred eEEEEe
Q 010759 464 IVKTYT 469 (502)
Q Consensus 464 ~~~~~~ 469 (502)
.+.++.
T Consensus 617 ~~~~i~ 622 (699)
T 1n7d_A 617 DVNLLA 622 (699)
T ss_dssp EEECCC
T ss_pred ceEEee
Confidence 776654
No 296
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.80 E-value=0.074 Score=58.83 Aligned_cols=321 Identities=15% Similarity=0.161 Sum_probs=164.1
Q ss_pred ccceeEEEECCC------CCEEEEEeC-CCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCC
Q 010759 154 TSEVCACAWSPA------GSLLASGSG-DSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGT 226 (502)
Q Consensus 154 ~~~V~~~~~spd------~~~l~sgs~-D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~ 226 (502)
...|.|+++.|. +.++|.|.. |++++|+++.+-.. .....+... .....|.-+.+ ....
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~-----------~~~~~L~~~--~~p~si~l~~~-~~~~ 618 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFEL-----------LHKEMLGGE--IIPRSILMTTF-ESSH 618 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCE-----------EEEEECCSS--CCEEEEEEEEE-TTEE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCe-----------EEEEECCCC--CCCcEEEEEEe-CCCc
Confidence 357999999864 368999996 99999999864221 111111110 01112333444 2346
Q ss_pred EEEEEECCCcEEEEECC---Ccee---EeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeE
Q 010759 227 LLATGSYDGQARIWSTN---GDLK---CTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTL 300 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~---~~~~---~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~ 300 (502)
+|..|-.||.+.-+..+ +.+. ..+-+ ..+|.-..+...+..-+-+..++...++--+ +.+.- -.....++.
T Consensus 619 ~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~-s~l~~~~v~ 695 (1158)
T 3ei3_A 619 YLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVF-SNVNLKEVN 695 (1158)
T ss_dssp EEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEE-EEBSSSCCC
T ss_pred EEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEE-eccChHHhc
Confidence 88899999988766543 2222 12223 3455444454444433333334555555432 22111 011111121
Q ss_pred E-EecCC---CceEEEEcCCCeEEEEEcCCCc--ceeeecCCCcceeEEEEcCCCCEEEEEeCC----------------
Q 010759 301 D-VDWRN---NVSFATSSTDNMIYVCKIGENR--PIKTFAGHQGEVNCVKWDPTGSLLASCSDD---------------- 358 (502)
Q Consensus 301 ~-~~~~~---~~~~~~~~~d~~i~~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~l~sgs~d---------------- 358 (502)
. ..|.. ...++... ++.+++..+.... +++.+. -...+..++++|..+.++.+..+
T Consensus 696 ~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~~~~~~~ip-L~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 773 (1158)
T 3ei3_A 696 YMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQKLHIRTVP-LYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPS 773 (1158)
T ss_dssp EEEEECCSSSTTEEEEEC-SSCEEEEEECCSSSEEEEEEE-CSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCC
T ss_pred eEeccCcccCCCcEEEEc-CCceEEEEecccCCeeEEEEe-CCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhh
Confidence 1 22321 23344333 4458887775432 222221 12356778888877655443311
Q ss_pred ---------------------------------CcEEEEeCCCCceeeeccc-CCCcEEEEEEccCCCCCCCCCCcEEEE
Q 010759 359 ---------------------------------VTAKIWNMKQDKYVHDLRE-HSKEIYTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 359 ---------------------------------g~i~iwd~~~~~~~~~~~~-~~~~i~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
+.|++.|-.+...+..+.- ....+.+++...-.. ....+++
T Consensus 774 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~-----~~~~~lv 848 (1158)
T 3ei3_A 774 ASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGK-----DPNTYFI 848 (1158)
T ss_dssp HHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTT-----CCCCEEE
T ss_pred hhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEcc-----CCCEEEE
Confidence 2356666666655544332 123344444322111 0112555
Q ss_pred EEe----------CCCeEEEEeCCCCeEEEEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEE-EecCC
Q 010759 405 SAS----------FDSTVKLWDVELGKLLYSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKT-YTGNG 472 (502)
Q Consensus 405 sgs----------~dg~i~iwd~~~~~~~~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~-~~~~~ 472 (502)
.|. ..|.|.+|++..++..... ....++|++|+-- .|++||+ - .+.|++|++...+.+.. .....
T Consensus 849 VGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~v~g~v~al~~~-~g~Lla~-i-g~~l~vy~l~~~~~L~~~~~~~~ 925 (1158)
T 3ei3_A 849 VGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKEVKGAVYSMVEF-NGKLLAS-I-NSTVRLYEWTTEKELRTECNHYN 925 (1158)
T ss_dssp EEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEEESSCEEEEEEE-TTEEEEE-E-TTEEEEEEECTTSCEEEEEEECC
T ss_pred EEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEEcCCcCEEEeee-CCEEEEE-c-CCEEEEEECCCCceEEEEeeccc
Confidence 554 3578999998654432221 2246789998632 3544443 3 47899999987654441 11122
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 473 GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
.+..+.....|+++++|..-..|.++.++
T Consensus 926 ~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~ 954 (1158)
T 3ei3_A 926 NIMALYLKTKGDFILVGDLMRSVLLLAYK 954 (1158)
T ss_dssp CSCEEEEEEETTEEEEEESSBCEEEEEEE
T ss_pred cEEEEEEeccCCEEEEEEhhheEEEEEEE
Confidence 23333344468899999888888877665
No 297
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.78 E-value=0.019 Score=51.59 Aligned_cols=196 Identities=13% Similarity=0.146 Sum_probs=118.0
Q ss_pred ccccccceeEEEECCCCCEEEE-EeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEE
Q 010759 150 LEGHTSEVCACAWSPAGSLLAS-GSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLL 228 (502)
Q Consensus 150 l~~H~~~V~~~~~spd~~~l~s-gs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l 228 (502)
+.|=...+..++|+|++..|++ ...++.|...|.. +.. ++...- ......-.+++.+++.++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v-------------~~~i~l---~g~~D~EGIa~~~~g~~~ 84 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDL-------------IRTIPL---DFVKDLETIEYIGDNQFV 84 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCE-------------EEEEEC---SSCSSEEEEEECSTTEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCE-------------EEEEec---CCCCChHHeEEeCCCEEE
Confidence 4455567999999998765554 6677788777765 321 111110 112457788888998887
Q ss_pred EEEECCCcEEEEECCCce----eEee--c----CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccC---cceeEEeee-
Q 010759 229 ATGSYDGQARIWSTNGDL----KCTL--S----KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKT---EEWKQQFEF- 294 (502)
Q Consensus 229 ~sg~~dg~i~iw~~~~~~----~~~~--~----~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~---~~~~~~~~~- 294 (502)
++.-.++.+.++++.... .... . ......-+|+|+|.++.|+++.......+|.+.. ......+..
T Consensus 85 vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~ 164 (255)
T 3qqz_A 85 ISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDK 164 (255)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECH
T ss_pred EEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecch
Confidence 776667788888754321 1111 1 1334568999999998887776655445554431 111111110
Q ss_pred ------c--ccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeec---CCC------cceeEEEEcCCCCEEEEEeC
Q 010759 295 ------H--SGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFA---GHQ------GEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 295 ------~--~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~---~h~------~~v~~v~~~p~~~~l~sgs~ 357 (502)
. .-....++...+..++.+...+.+..++.... ++..+. +.. .....|+|.++|+++++ ++
T Consensus 165 ~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIv-sE 242 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIV-SE 242 (255)
T ss_dssp HHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEE-ET
T ss_pred hhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCCEEEE-cC
Confidence 0 11233445556667888888889999887654 443332 211 24678999999986665 56
Q ss_pred CCcEEEE
Q 010759 358 DVTAKIW 364 (502)
Q Consensus 358 dg~i~iw 364 (502)
-+.+..+
T Consensus 243 ~n~~y~f 249 (255)
T 3qqz_A 243 PNRFYRF 249 (255)
T ss_dssp TTEEEEE
T ss_pred CceEEEE
Confidence 6655544
No 298
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.69 E-value=0.022 Score=54.19 Aligned_cols=60 Identities=12% Similarity=0.109 Sum_probs=42.0
Q ss_pred CCEEEEEEC-------CCCCEEEEEeCCCcEEEEeCCC-CeeE--EEEe-c-CCCEEEEEECCCCCEEEEEE
Q 010759 431 EPVYSLAFS-------PTGEYLASGSLDKSMHIWSLKE-GKIV--KTYT-G-NGGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 431 ~~v~~l~~s-------pdg~~lasgs~Dg~i~iw~~~~-~~~~--~~~~-~-~~~i~~~~ws~~g~~la~~~ 490 (502)
.....++|. .+|.++++.-..+.|...++.. ++.. ..+. + ...+..+++.|||.+.++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~~rp~~v~~~pDG~lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGDNMEVRKISTFFKNVFGRLRDVVIDDDGGILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECGGGCEEEEEEECTTTSCCEEEEEECTTSCEEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECCCCcccceeeeccCCCCCeeEEEECCCCcEEEEEe
Confidence 457788884 5677777776778898888875 3332 2332 2 35689999999998777765
No 299
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.68 E-value=0.069 Score=55.07 Aligned_cols=221 Identities=10% Similarity=0.015 Sum_probs=136.5
Q ss_pred CCCcEEEEECCCcee-Eeec-CCCCCEEEEEecCCCCEEE-EecCCCeEEEEeccCcceeEEeee--cccCeEEEecCCC
Q 010759 233 YDGQARIWSTNGDLK-CTLS-KHKGPIFSLKWNKKGDYLL-TGSCDKTAIVWDVKTEEWKQQFEF--HSGPTLDVDWRNN 307 (502)
Q Consensus 233 ~dg~i~iw~~~~~~~-~~~~-~h~~~V~~l~~~~~~~~l~-sgs~D~~v~iwd~~~~~~~~~~~~--~~~~~~~~~~~~~ 307 (502)
....|+..++.+... ..+. ..-..+.+|+|++.+..|+ +-..++.|..+++........+.. ....-++++|...
T Consensus 13 ~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 13 RRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGK 92 (628)
T ss_dssp ETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTT
T ss_pred eCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCC
Confidence 446788888765322 2221 1234578999999766655 556678999999876544333322 2223467788888
Q ss_pred ceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe--CCCcEEEEeCCCCceeeecccCCCcEEEE
Q 010759 308 VSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS--DDVTAKIWNMKQDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 308 ~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs--~dg~i~iwd~~~~~~~~~~~~~~~~i~~~ 385 (502)
..+++-...+.|.+.++........+...-.....+++.|....|+... ..+.|...++...... .+.........+
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l~~~~~~P~Gl 171 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TLVPNVGRANGL 171 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EEECSCSSEEEE
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EEECCCCCcceE
Confidence 8888888889999999876543223323345578999998655554444 2467777777644322 222234556788
Q ss_pred EEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee
Q 010759 386 RWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI 464 (502)
Q Consensus 386 ~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~ 464 (502)
++++.+. .+..+-...+.|...|+..... ..+.........|++.. +.++++-...+.|...+..+|+.
T Consensus 172 alD~~~~--------~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~ 240 (628)
T 4a0p_A 172 TIDYAKR--------RLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQN 240 (628)
T ss_dssp EEETTTT--------EEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCS
T ss_pred EEccccC--------EEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCc
Confidence 8888653 2334445677899999864332 22322333456787765 44555555578899998777654
No 300
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.59 E-value=0.055 Score=51.46 Aligned_cols=66 Identities=17% Similarity=0.156 Sum_probs=45.0
Q ss_pred CCEEEEEECC-------CCCEEEEEeCCCcEEEEeCCCCeeEEE--E-ec-CCCEEEEEECCCCCEEEEEE-CCCeEE
Q 010759 431 EPVYSLAFSP-------TGEYLASGSLDKSMHIWSLKEGKIVKT--Y-TG-NGGIFEVCWNKEGDKIAACF-ANHTVC 496 (502)
Q Consensus 431 ~~v~~l~~sp-------dg~~lasgs~Dg~i~iw~~~~~~~~~~--~-~~-~~~i~~~~ws~~g~~la~~~-~~~~v~ 496 (502)
.....++|.. +|.++++.-..+.|...++..++.+.. + .. ...+..+++.|||.+.++.. .+|.|.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td~~~g~I~ 348 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTDESSGELL 348 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEECSTTEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEeCCCCEEE
Confidence 3567788864 467777776778888888876654432 2 12 34789999999999766544 456553
No 301
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.52 E-value=0.00053 Score=71.97 Aligned_cols=216 Identities=9% Similarity=-0.015 Sum_probs=114.7
Q ss_pred CCCeEEEEeccCcceeEEeeecccCeEEEec--CCCceEEEEcCCCeEEEEEcCC----CcceeeecCCCcceeEEEEcC
Q 010759 274 CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDW--RNNVSFATSSTDNMIYVCKIGE----NRPIKTFAGHQGEVNCVKWDP 347 (502)
Q Consensus 274 ~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~i~~~~~~~----~~~~~~~~~h~~~v~~v~~~p 347 (502)
..+.|+..++.+..+...+... ..+..+.| ..+..|++-...+.|+.+++.. ......+.........|++.+
T Consensus 384 ~~~~I~~id~~~~~~~~~~~~~-~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~ 462 (699)
T 1n7d_A 384 NRHEVRKMTLDRSEYTSLIPNL-RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDW 462 (699)
T ss_dssp CTTC-CEECTTSCCEECCSCCC-TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCC
T ss_pred CccceEEEeCCCCcceeeeccC-cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEe
Confidence 3457888888776554333221 22334444 3455566666677888888764 222222211122345678875
Q ss_pred C-CCEEEEEeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-CCeEEEEeCCCCeEEEE
Q 010759 348 T-GSLLASCSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-DSTVKLWDVELGKLLYS 425 (502)
Q Consensus 348 ~-~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~-dg~i~iwd~~~~~~~~~ 425 (502)
. ++++++-...+.|.++++........+.........|++.|.+. . ++.+-.. .+.|..+++........
T Consensus 463 ~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g-------~-ly~td~~~~~~I~~~~~dG~~~~~l 534 (699)
T 1n7d_A 463 IHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHG-------F-MYWTDWGTPAKIKKGGLNGVDIYSL 534 (699)
T ss_dssp SSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSS-------C-CEECCCSSSCCEEBCCSSSCCCCEE
T ss_pred eCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCC-------c-EEEcccCCCCeEEEEeCCCCCeeEE
Confidence 4 45566656678899999875543332222223345667766542 1 2233222 36777777653221111
Q ss_pred eeCCCCCEEEEEECCCCCE-EEEEeCCCcEEEEeCCCCeeEEEEec---CCCEEEEEECCCCCEEEEEECCCeEEEEE
Q 010759 426 LNGHREPVYSLAFSPTGEY-LASGSLDKSMHIWSLKEGKIVKTYTG---NGGIFEVCWNKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 426 ~~~h~~~v~~l~~spdg~~-lasgs~Dg~i~iw~~~~~~~~~~~~~---~~~i~~~~ws~~g~~la~~~~~~~v~v~~ 499 (502)
+.......+.|+|+|++.. +++-+..+.|..+++........+.. .....+|++..+ .++++...++.|.++|
T Consensus 535 ~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~~~V~~~d 611 (699)
T 1n7d_A 535 VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED-KVFWTDIINEAIFSAN 611 (699)
T ss_dssp SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT-EEEEECSTTTCEEEEE
T ss_pred EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC-EEEEEeCCCCeEEEEE
Confidence 1222234578999998654 45555678899999864332222221 122345565443 3555556677887776
No 302
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.42 E-value=0.09 Score=49.93 Aligned_cols=103 Identities=12% Similarity=0.106 Sum_probs=57.3
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC---CCEEEEE
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLATG 231 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~---~~~l~sg 231 (502)
..-.+++|.|+|+++++ ..++.|++++ ++.. ..+.... ...........|+|+|+ +..|+.+
T Consensus 31 ~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~-----------~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~ 95 (352)
T 2ism_A 31 EVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRL-----------STYAELS-VYHRGESGLLGLALHPRFPQEPYVYAY 95 (352)
T ss_dssp SCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEE-----------EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCc-----------cEeecce-EeecCCCCceeEEECCCCCCCCEEEEE
Confidence 34578999999996655 4569898887 3321 0111111 11112345789999998 4444444
Q ss_pred EC-C-----CcEEEEECCCc------ee-Eeec---CCCCCEEEEEecCCCCEEEEe
Q 010759 232 SY-D-----GQARIWSTNGD------LK-CTLS---KHKGPIFSLKWNKKGDYLLTG 272 (502)
Q Consensus 232 ~~-d-----g~i~iw~~~~~------~~-~~~~---~h~~~V~~l~~~~~~~~l~sg 272 (502)
.. . +.|..++..+. .. ..+. ........++|.|+|..+++-
T Consensus 96 ~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~ 152 (352)
T 2ism_A 96 RTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTT 152 (352)
T ss_dssp EEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEEC
T ss_pred EecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEE
Confidence 33 2 55666765532 11 1122 111122589999999766653
No 303
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.33 E-value=0.03 Score=52.02 Aligned_cols=188 Identities=11% Similarity=0.154 Sum_probs=111.6
Q ss_pred EEecCC--CceEEEEcCCCeEEEEEcCCCccee-eecC----CC--cceeEEEE---cCCCCEEEEEe------------
Q 010759 301 DVDWRN--NVSFATSSTDNMIYVCKIGENRPIK-TFAG----HQ--GEVNCVKW---DPTGSLLASCS------------ 356 (502)
Q Consensus 301 ~~~~~~--~~~~~~~~~d~~i~~~~~~~~~~~~-~~~~----h~--~~v~~v~~---~p~~~~l~sgs------------ 356 (502)
++.|.. ...+++.-..+.|..|+...+.... .+.+ .. ..+..+.| .|+++++++..
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~ 96 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSS 96 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccccccc
Confidence 445532 3344555578999999886543322 2222 11 13579999 68888877543
Q ss_pred -CCCcEEEEeCC---CCceeeecc--cC-----------CCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCC
Q 010759 357 -DDVTAKIWNMK---QDKYVHDLR--EH-----------SKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVE 418 (502)
Q Consensus 357 -~dg~i~iwd~~---~~~~~~~~~--~~-----------~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~ 418 (502)
.+..+..||+. +++.+.... .. ......++..++|. .-++++.- +.|...+..
T Consensus 97 ~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn---------aYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 97 HGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN---------SYVAFALGMPAIARVSAD 167 (334)
T ss_dssp SSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC---------EEEEEEESSCEEEEECTT
T ss_pred CCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC---------EEEeCCCCCCeEEEEeCC
Confidence 26779999998 676654322 11 12477889888886 44567777 777777765
Q ss_pred CCeEE-EEee----CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee--EEEEe-cC----CCEEE-EEECCCCCE
Q 010759 419 LGKLL-YSLN----GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI--VKTYT-GN----GGIFE-VCWNKEGDK 485 (502)
Q Consensus 419 ~~~~~-~~~~----~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~--~~~~~-~~----~~i~~-~~ws~~g~~ 485 (502)
..... +-+. ......+.|+++|+|..|++....|.|..+|+.+... +..-. +. ..... +.-..+|+.
T Consensus 168 G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~v 247 (334)
T 2p9w_A 168 GKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNES 247 (334)
T ss_dssp SCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEE
T ss_pred CCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEE
Confidence 33222 1111 1122367999999999888876699999999875322 21110 21 12333 344457777
Q ss_pred -EEEEECCCeEEE
Q 010759 486 -IAACFANHTVCV 497 (502)
Q Consensus 486 -la~~~~~~~v~v 497 (502)
|++...++.+.+
T Consensus 248 llV~~~~~~~~~l 260 (334)
T 2p9w_A 248 VLVGARAPYAISF 260 (334)
T ss_dssp EEEEEETTEEEEE
T ss_pred EEEEcCCCCEEEE
Confidence 455555654443
No 304
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.23 E-value=0.097 Score=49.54 Aligned_cols=101 Identities=16% Similarity=0.170 Sum_probs=62.2
Q ss_pred ceeEEEEcCCCCEEEEEeC-----------------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcE
Q 010759 339 EVNCVKWDPTGSLLASCSD-----------------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQL 401 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~-----------------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~ 401 (502)
..+.+.+.++|.+.++... .|.|.-++. ++ +..+...-..-+.++|+|+++ .
T Consensus 166 ~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~--------~ 234 (355)
T 3sre_A 166 SVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGK--------Y 234 (355)
T ss_dssp SEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSS--------E
T ss_pred CCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCC--------E
Confidence 4678888888887776541 233444443 32 222222223467899999986 3
Q ss_pred EEEEEeCCCeEEEEeCCC-CeE--EEEeeCCCCCEEEEEECC-CCCEEEEEeCC
Q 010759 402 ILASASFDSTVKLWDVEL-GKL--LYSLNGHREPVYSLAFSP-TGEYLASGSLD 451 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~-~~~--~~~~~~h~~~v~~l~~sp-dg~~lasgs~D 451 (502)
+.++-+..+.|..|++.. ++. ...+. .......+++.+ +|.+.+++..+
T Consensus 235 lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCCEEEEEESC
T ss_pred EEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCcEEEEecCC
Confidence 455556678999999863 332 22332 245567899999 59988877644
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.19 E-value=0.047 Score=51.70 Aligned_cols=155 Identities=13% Similarity=0.092 Sum_probs=90.5
Q ss_pred eeEEEEcCCCCEEEEEe------------CCCcEEEEeCCCCc-eeeecc--c-----CCCcEEEEEEccCCCCCCCCCC
Q 010759 340 VNCVKWDPTGSLLASCS------------DDVTAKIWNMKQDK-YVHDLR--E-----HSKEIYTIRWSPTGSGTNNPNQ 399 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs------------~dg~i~iwd~~~~~-~~~~~~--~-----~~~~i~~~~~sp~g~~~~~~~~ 399 (502)
...+...|+|..+++++ .+|.|.++|..+.. ....+. + ..-....+.+.++.. ..
T Consensus 52 ~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~d-----g~ 126 (355)
T 3sre_A 52 SEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDD-----NT 126 (355)
T ss_dssp CCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTT-----CC
T ss_pred cceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCC-----Cc
Confidence 44566788876666652 68999999987421 112221 1 122445555555311 01
Q ss_pred cEEEEEEeC--CCeEEEEeCCCC--e--EEEEeeCC-CCCEEEEEECCCCCEEEEEeC-----------------CCcEE
Q 010759 400 QLILASASF--DSTVKLWDVELG--K--LLYSLNGH-REPVYSLAFSPTGEYLASGSL-----------------DKSMH 455 (502)
Q Consensus 400 ~~~l~sgs~--dg~i~iwd~~~~--~--~~~~~~~h-~~~v~~l~~spdg~~lasgs~-----------------Dg~i~ 455 (502)
..+++.-.. +.+|.+|++... . .+..+.+. -...+++++.++|.+.++... .|.|.
T Consensus 127 ~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vy 206 (355)
T 3sre_A 127 VYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVT 206 (355)
T ss_dssp EEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEE
T ss_pred EEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEE
Confidence 123333222 567888776542 2 22334432 245799999999998887651 24455
Q ss_pred EEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEE-CCCeEEEEEee
Q 010759 456 IWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACF-ANHTVCVLDFR 501 (502)
Q Consensus 456 iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~-~~~~v~v~~~~ 501 (502)
-++. +++.....+-...++++|||||+.|..+. ..+.|.+|++.
T Consensus 207 r~d~--~~~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~ 251 (355)
T 3sre_A 207 YYSP--NDVRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKH 251 (355)
T ss_dssp EECT--TCCEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEEC
T ss_pred EEEC--CeEEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEEC
Confidence 5554 33333334445678999999998777664 57789999874
No 306
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.05 E-value=0.36 Score=49.55 Aligned_cols=308 Identities=8% Similarity=0.031 Sum_probs=157.5
Q ss_pred cceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 155 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 155 ~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
.....+|+.+.+. +.++-...+.|.+.++..... .... . ..-.....|++.|.+.+|+.+..
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~---------~~l~----~----~~l~~P~~Iavdp~~g~ly~tD~ 146 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR---------KVLF----W----QELDQPRAIALDPSSGFMYWTDW 146 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC---------EEEE----C----SSCSCCCCEEEETTTTEEEEEEC
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE---------EEEE----e----CCCCCCceEEEecCCCeEEEecc
Confidence 4578999999655 555555678899988764321 0110 0 01223567888886555554443
Q ss_pred --CCcEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEe-cCCCeEEEEeccCcceeEEeeecccCeEEEecCCCce
Q 010759 234 --DGQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVS 309 (502)
Q Consensus 234 --dg~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~sg-s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (502)
.+.|...+.++.....+. ..-....+|++.+.+..|+.+ +..+.|...|+..................+.+..+..
T Consensus 147 g~~~~I~r~~~dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~~l 226 (619)
T 3s94_A 147 GEVPKIERAGMDGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFEDIL 226 (619)
T ss_dssp SSSCEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEEC---------CCCEEESSSEE
T ss_pred CCCCEEEEEECCCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCccEEEEeCCCCCceEEEEeCCEE
Confidence 355666667765444332 233456899999877666544 4567888888865433222221122233455555555
Q ss_pred EEEEcCCCeEEEEEcCCCcceeeecC-----------CC--------------cceeEEEE-cC----------------
Q 010759 310 FATSSTDNMIYVCKIGENRPIKTFAG-----------HQ--------------GEVNCVKW-DP---------------- 347 (502)
Q Consensus 310 ~~~~~~d~~i~~~~~~~~~~~~~~~~-----------h~--------------~~v~~v~~-~p---------------- 347 (502)
+++-...+.|...+..+++....+.. |. +...-+++ +|
T Consensus 227 y~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~v~~~~~qp~~~n~C~~~ng~Cs~lCl~~~~~~~~~C~C~~g~~l~ 306 (619)
T 3s94_A 227 YWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHAFSQQRQPNATNPCGIDNGGCSHLCLMSPVKPFYQCACPTGVKLL 306 (619)
T ss_dssp EEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEEECCGGGSCCCCCTTTTTGGGCSSEEEECSSTTSEEEECCTTCCBC
T ss_pred EEecCCCCEEEEEECCCCcccEEEecCCCCCcEEEEEccccCCCccccccCCCCcccceEECCCCCCCceEeCCchheec
Confidence 66666677777777654432211110 00 00101111 11
Q ss_pred -CCC--------EEEEEeCCCcEEEEeCCCCceee-ecc-cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEe
Q 010759 348 -TGS--------LLASCSDDVTAKIWNMKQDKYVH-DLR-EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWD 416 (502)
Q Consensus 348 -~~~--------~l~sgs~dg~i~iwd~~~~~~~~-~~~-~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd 416 (502)
|++ +|+.+ ..+.|+..++....... .+. ..-..+..++|.+.+. .+..+-...+.|+-++
T Consensus 307 ~d~~~C~~~~~~~Ll~~-~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~--------~ly~sD~~~~~I~r~~ 377 (619)
T 3s94_A 307 ENGKTCKDGATELLLLA-RRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEG--------YIYWTDDEVRAIRRSF 377 (619)
T ss_dssp TTSSCBCSSCSEEEEEE-ESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTT--------EEEEEETTTTEEEEEE
T ss_pred ccCcccCCCCceEEEEE-cccceEEEecCCCccceeEEeccccCccEEEEEEcCCC--------eEEEEeCCCCeEEEEE
Confidence 111 11111 22344444544332110 010 1123456677766332 2344444567787777
Q ss_pred CCCCeEEEEeeCCCCCEEEEEECCCC-CEEEEEeCCCcEEEEeCCCCeeEEEEe--cCCCEEEEEECCCCCEEEEE
Q 010759 417 VELGKLLYSLNGHREPVYSLAFSPTG-EYLASGSLDKSMHIWSLKEGKIVKTYT--GNGGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 417 ~~~~~~~~~~~~h~~~v~~l~~spdg-~~lasgs~Dg~i~iw~~~~~~~~~~~~--~~~~i~~~~ws~~g~~la~~ 489 (502)
+........+.........|++.+.+ ++..+-+..+.|.+.++.... ..++. .-....+++++|....|..+
T Consensus 378 ~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~-~~~l~~~~l~~P~~iavdp~~G~ly~t 452 (619)
T 3s94_A 378 IDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTM-RKILISEDLEEPRAIVLDPMVGYMYWT 452 (619)
T ss_dssp TTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECTTCCSEEEEEEETTTTEEEEE
T ss_pred cCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCe-EEEEEECCCCCeeeEEEEcCCCcEEEe
Confidence 76433222233223456789998754 455565667899999987543 33332 23457888888863344333
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.05 E-value=0.23 Score=47.14 Aligned_cols=101 Identities=12% Similarity=0.081 Sum_probs=56.3
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC---CCEEEEE
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLATG 231 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~---~~~l~sg 231 (502)
..-.+++|.|+|+++++ ..+|.|++++ .++. ..+..+. ...........|+|+|+ +..|+.+
T Consensus 29 ~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~------------~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~ 93 (354)
T 3a9g_A 29 EVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGK------------KLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLY 93 (354)
T ss_dssp SCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCE------------EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEE
T ss_pred CCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCc------------eEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEE
Confidence 34678999999986555 4568898886 2221 0111111 01111345789999997 4444443
Q ss_pred EC----C----CcEEEEECCCc------ee---Eeec---CCCCCEEEEEecCCCCEEEEe
Q 010759 232 SY----D----GQARIWSTNGD------LK---CTLS---KHKGPIFSLKWNKKGDYLLTG 272 (502)
Q Consensus 232 ~~----d----g~i~iw~~~~~------~~---~~~~---~h~~~V~~l~~~~~~~~l~sg 272 (502)
.. + +.|..|+..+. .. ..+. .|. ...|+|.|+|..+++-
T Consensus 94 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~--~~~l~~~pDG~Lyvt~ 152 (354)
T 3a9g_A 94 ASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHN--GGRIRFGPDGMLYITT 152 (354)
T ss_dssp EEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCC--CCCEEECTTSCEEEEC
T ss_pred EeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcC--CceEEECCCCcEEEEE
Confidence 32 2 45666665432 11 1122 232 3578999999866654
No 308
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.81 E-value=0.14 Score=49.12 Aligned_cols=111 Identities=15% Similarity=0.176 Sum_probs=74.1
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc------------eeeeccc------CCCcEEEEEEccCCCCCCCCCCc
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK------------YVHDLRE------HSKEIYTIRWSPTGSGTNNPNQQ 400 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~------------~~~~~~~------~~~~i~~~~~sp~g~~~~~~~~~ 400 (502)
.|..+..+|+|.+||..+. ..|.|-.+..+. ....++. ...+|..+.|+|-+...
T Consensus 67 ~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~d------ 139 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRD------ 139 (452)
T ss_dssp TTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGG------
T ss_pred ceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCC------
Confidence 5778999999999988754 478887776221 0112221 24679999999987521
Q ss_pred EEEEEEeCCCeEEEEeCCCC--eEEEEe---------eCCCCCEEEEEECCCCCEEEEE--eCCCcEEEE
Q 010759 401 LILASASFDSTVKLWDVELG--KLLYSL---------NGHREPVYSLAFSPTGEYLASG--SLDKSMHIW 457 (502)
Q Consensus 401 ~~l~sgs~dg~i~iwd~~~~--~~~~~~---------~~h~~~v~~l~~spdg~~lasg--s~Dg~i~iw 457 (502)
..|++-..|+.||+||+... ++. .+ ......|.+++|+++|-.|... +..|-|+-.
T Consensus 140 s~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 140 SCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp CEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 24666778999999999752 122 22 2233568999999988655554 477877644
No 309
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.69 E-value=0.093 Score=48.35 Aligned_cols=209 Identities=12% Similarity=0.124 Sum_probs=101.4
Q ss_pred CeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCC-----CeEEEEEcCCCc---c--eeeecCCCcceeEEE
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENR---P--IKTFAGHQGEVNCVK 344 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~---~--~~~~~~h~~~v~~v~ 344 (502)
..+.+||+.+.+|...-...... -..+...++..++.++.+ ..+++++..+.. - +..+........++.
T Consensus 31 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~ 110 (301)
T 2vpj_A 31 DVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT 110 (301)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE
T ss_pred eEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE
Confidence 36788898888776532111110 111222344555655533 457888876654 1 111111111122222
Q ss_pred EcCCCCEEEEEeCCC-----cEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeE
Q 010759 345 WDPTGSLLASCSDDV-----TAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STV 412 (502)
Q Consensus 345 ~~p~~~~l~sgs~dg-----~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i 412 (502)
+ ++++++.|+.++ .+.+||..+..... .+.........+.+ ++ . +++.|+.+ ..+
T Consensus 111 ~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~~ 177 (301)
T 2vpj_A 111 L--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG--------V-IYCLGGYDGLNILNSV 177 (301)
T ss_dssp E--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT--------E-EEEECCBCSSCBCCCE
T ss_pred E--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC--------E-EEEECCCCCCcccceE
Confidence 2 677777777543 57888887665332 11111111111111 22 2 34445443 458
Q ss_pred EEEeCCCCeEEEE--eeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEEE--ecC-CCEEEEEECCC
Q 010759 413 KLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKTY--TGN-GGIFEVCWNKE 482 (502)
Q Consensus 413 ~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~~--~~~-~~i~~~~ws~~ 482 (502)
.+||+.+.+-... +.........+.+ ++++++.|+.+ ..|.+||+.+.+-...- ... .....+.+ +
T Consensus 178 ~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~ 253 (301)
T 2vpj_A 178 EKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--R 253 (301)
T ss_dssp EEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--T
T ss_pred EEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--C
Confidence 8889876643221 1111111223333 56777777764 46899999876543221 111 11122222 6
Q ss_pred CCEEEEEECC-----CeEEEEEee
Q 010759 483 GDKIAACFAN-----HTVCVLDFR 501 (502)
Q Consensus 483 g~~la~~~~~-----~~v~v~~~~ 501 (502)
++.++.|+.+ ..|.+||..
T Consensus 254 ~~i~v~GG~~~~~~~~~v~~yd~~ 277 (301)
T 2vpj_A 254 GRLYAIAGYDGNSLLSSIECYDPI 277 (301)
T ss_dssp TEEEEECCBCSSSBEEEEEEEETT
T ss_pred CEEEEEcCcCCCcccccEEEEcCC
Confidence 6777777655 356777753
No 310
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.68 E-value=0.72 Score=47.42 Aligned_cols=151 Identities=10% Similarity=-0.001 Sum_probs=83.5
Q ss_pred cceeEEEECCCCC-EEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEEC
Q 010759 155 SEVCACAWSPAGS-LLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSY 233 (502)
Q Consensus 155 ~~V~~~~~spd~~-~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~ 233 (502)
.....+|+.+.+. +.++-...+.|.+.++..... ... . . ..-.....+++.|...+|+.+..
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~---------~~l-~---~----~~l~~P~~iavdp~~G~lY~tD~ 142 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR---------QVL-V---W----KDLDSPRALALDPAEGFMYWTEW 142 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTC---------EEE-E---C----SSCCCEEEEEEETTTTEEEEEEC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcE---------EEE-E---e----CCCCCcccEEEccCCCeEEEeCC
Confidence 3567899987655 445555667888888753211 111 0 0 11234578999985545554442
Q ss_pred --CCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEe-cCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceE
Q 010759 234 --DGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTG-SCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSF 310 (502)
Q Consensus 234 --dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sg-s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (502)
.+.|...++.+.....+...-....+|++.+++..|+.+ ...+.|...|+..... ..+.........+....+..+
T Consensus 143 g~~~~I~r~~~dG~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~~~ly 221 (628)
T 4a0p_A 143 GGKPKIDRAAMDGSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQDYIY 221 (628)
T ss_dssp SSSCEEEEEETTSCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEETTEEE
T ss_pred CCCCEEEEEeCCCCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEECCEEE
Confidence 456777777765544443334456899999977666544 4567888888765433 222222222333333333444
Q ss_pred EEEcCCCeEEEEE
Q 010759 311 ATSSTDNMIYVCK 323 (502)
Q Consensus 311 ~~~~~d~~i~~~~ 323 (502)
++-...+.|...+
T Consensus 222 ~tD~~~~~I~~~d 234 (628)
T 4a0p_A 222 WTDWSRRSIERAN 234 (628)
T ss_dssp EEETTTTEEEEEE
T ss_pred EecCCCCEEEEEE
Confidence 4444444444444
No 311
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.60 E-value=0.18 Score=46.35 Aligned_cols=223 Identities=11% Similarity=0.123 Sum_probs=107.7
Q ss_pred CCCEEEEEE-CC-----CcEEEEECCCceeEeecCC---CCCEEEEEecCCCCEEEEecCC-----CeEEEEeccCcc--
Q 010759 224 EGTLLATGS-YD-----GQARIWSTNGDLKCTLSKH---KGPIFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEE-- 287 (502)
Q Consensus 224 ~~~~l~sg~-~d-----g~i~iw~~~~~~~~~~~~h---~~~V~~l~~~~~~~~l~sgs~D-----~~v~iwd~~~~~-- 287 (502)
++.+++.|+ .+ ..+.+||.....-..+..- ......+. .++..++.|+.+ ..+.+||+.+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVS--LHDRIYVIGGYDGRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEE--ECCEEEEEcCCCCCccCceEEEEECCCCCCC
Confidence 345566665 32 3677888765433222211 11111222 245566677655 468999998887
Q ss_pred -eeEEeeecccC-eEEEecCCCceEEEEcCC-----CeEEEEEcCCCcc--eeeecCCCcceeEEEEcCCCCEEEEEeCC
Q 010759 288 -WKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 288 -~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~sgs~d 358 (502)
|...-...... -..+...++..++.++.+ ..+.+++..+..- +..+......-.++.+ ++++++.|+.+
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 76543221110 011122244555555432 3577777665431 1111111111122222 67777777765
Q ss_pred -----CcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEEE-
Q 010759 359 -----VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLYS- 425 (502)
Q Consensus 359 -----g~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~- 425 (502)
..+.+||..+...... +.........+.+ ++ .+++.|+.+ ..+.+||+.+.+-...
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~---------~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~ 238 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--ND---------HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVT 238 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT---------EEEEECCBCSSSBCCCEEEEETTTTEEEEEC
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CC---------EEEEEeCCCCCcccceEEEEeCCCCcEEECC
Confidence 3578888877654321 1111111111111 22 244455543 4688999987653222
Q ss_pred -eeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010759 426 -LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 463 (502)
Q Consensus 426 -~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 463 (502)
+.........+.+ ++++++.|+.+ ..|.+||+.+.+
T Consensus 239 ~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 239 SMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp CCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred CCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 2111111222333 56777777765 357788887654
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.51 E-value=0.5 Score=43.60 Aligned_cols=225 Identities=12% Similarity=0.159 Sum_probs=133.8
Q ss_pred EecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCC-CcceeeecCCC--
Q 010759 261 KWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGE-NRPIKTFAGHQ-- 337 (502)
Q Consensus 261 ~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~-~~~~~~~~~h~-- 337 (502)
-.||..+.++.=. ..++.++|+.+...+..+.... ++.=-.|.+...++.- ++..|+.|++.. ..|++.|.-|.
T Consensus 73 IMnP~~~ViALra-g~~LQiFnletK~klks~~~~e-~VvfWkWis~~~L~lV-T~taVyHWs~~~~s~P~kvFdR~~~L 149 (365)
T 2xzh_A 73 IMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSSL 149 (365)
T ss_dssp EECSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS-CEEEEEECSSSEEEEE-ESSEEEEEESSTTCCCEEEEECCGGG
T ss_pred eeCCCccEEEEec-CCeEEEechHHhhhhcceecCC-ccEEEEecCCCeEEEE-cCCcEEEEcccCCCCCceeeecchhc
Confidence 3578777665544 6889999999998877776643 4555566655554433 346799999964 57888887764
Q ss_pred --cceeEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC
Q 010759 338 --GEVNCVKWDPTGSLLASCSD-------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASF 408 (502)
Q Consensus 338 --~~v~~v~~~p~~~~l~sgs~-------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~ 408 (502)
..|..-..+++.++++..+- .|.+.+|....+ .-+.+.+|......+. .+|. +....+++-+..
T Consensus 150 ~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~--~~g~----~~~~~lf~fa~r 222 (365)
T 2xzh_A 150 AGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFK--MEGN----AEESTLFCFAVR 222 (365)
T ss_dssp TTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-EEEEECCSEEEEEEEC--CTTC----SSCEEEEEEEEE
T ss_pred ccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-ccceeeeeeeeeEEEe--cCCC----CCCceEEEEEEe
Confidence 35667777889998765442 367888987644 3344555544333332 2222 111123333332
Q ss_pred ---CCeEEEEeCCCC---eE-----EEEe--e--CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-CC
Q 010759 409 ---DSTVKLWDVELG---KL-----LYSL--N--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-NG 472 (502)
Q Consensus 409 ---dg~i~iwd~~~~---~~-----~~~~--~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~~ 472 (502)
.+.++|-++... .. ...+ . .-.+.--++..|+--..+..-+.-|.|++||+.+|..+..-.- ..
T Consensus 223 ~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i~~nrIS~d 302 (365)
T 2xzh_A 223 GQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISGE 302 (365)
T ss_dssp ETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred cCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcccCcEEEEeccCCC
Confidence 257888887432 11 1111 1 1123345566676666777778899999999999998765432 23
Q ss_pred CEEEEEECCCCCEEEEEECCCeE
Q 010759 473 GIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v 495 (502)
.|+..+-+....-+..--..|.|
T Consensus 303 ~iF~ta~~~~~~Gi~~Vnr~GqV 325 (365)
T 2xzh_A 303 TIFVTAPHEATAGIIGVNRKGQV 325 (365)
T ss_dssp CEEEEEEEGGGTEEEEEETTCEE
T ss_pred ceEEecccCCCCcEEEEcCCCEE
Confidence 45544444443333333355544
No 313
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=96.35 E-value=0.45 Score=46.75 Aligned_cols=109 Identities=10% Similarity=0.126 Sum_probs=61.1
Q ss_pred cceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--eeeccc------CCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-
Q 010759 338 GEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDLRE------HSKEIYTIRWSPTGSGTNNPNQQLILASASF- 408 (502)
Q Consensus 338 ~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~~~~~~------~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~- 408 (502)
.....++|.|+|+++++-...+.|++++...+.. +..+.. .......++|+|+-. .+..+|++....
T Consensus 27 ~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~----~~g~lYv~~s~~~ 102 (454)
T 1cru_A 27 NKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFK----NNPYIYISGTFKN 102 (454)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTT----TSCEEEEEEEEEC
T ss_pred CCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcC----cCCEEEEEEeccc
Confidence 3567899999999887765545788887654432 222221 234567899998521 011234433220
Q ss_pred ----------CCeEEEEeCCCC-------eEEEE-eeC-CCCCEEEEEECCCCCEEEEEeC
Q 010759 409 ----------DSTVKLWDVELG-------KLLYS-LNG-HREPVYSLAFSPTGEYLASGSL 450 (502)
Q Consensus 409 ----------dg~i~iwd~~~~-------~~~~~-~~~-h~~~v~~l~~spdg~~lasgs~ 450 (502)
...|.-|++..+ +.+.. +.. .......|+|.|||.+.++.+.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 124444444321 22222 221 1124689999999988777553
No 314
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.34 E-value=0.29 Score=45.02 Aligned_cols=223 Identities=14% Similarity=0.169 Sum_probs=104.3
Q ss_pred CCEEEEEECC----CcEEEEECCCceeEeecCCCCC--EEEEEecCCCCEEEEecCC-----CeEEEEeccCcceeEEee
Q 010759 225 GTLLATGSYD----GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSCD-----KTAIVWDVKTEEWKQQFE 293 (502)
Q Consensus 225 ~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~--V~~l~~~~~~~~l~sgs~D-----~~v~iwd~~~~~~~~~~~ 293 (502)
+.+++.|+.+ ..+.++|.....-..+.....+ -.++... ++..++.|+.+ ..+.+||+.+.+|...-.
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~ 94 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMVYM-AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVAN 94 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE-TTEEEEESCBCSSSBCCCEEEEETTTTEEEEECC
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEEEE-CCEEEEEeCcCCCccccceEEECCCCCceeeCCC
Confidence 3455555543 3567777655433222111110 0111111 45566677654 358899999888765432
Q ss_pred ecccC-eEEEecCCCceEEEEcCC-----CeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEEEeCC-------
Q 010759 294 FHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD------- 358 (502)
Q Consensus 294 ~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~sgs~d------- 358 (502)
..... -..+...++..++.++.+ ..+.+++..+..-.. .+........++.+ ++++++.|+.+
T Consensus 95 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~ 172 (302)
T 2xn4_A 95 MRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCL 172 (302)
T ss_dssp CSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEEC
T ss_pred CCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccc
Confidence 21111 011122244555555433 245667765543111 11111111122222 56777777653
Q ss_pred CcEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEEE--eeCC
Q 010759 359 VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLYS--LNGH 429 (502)
Q Consensus 359 g~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~~--~~~h 429 (502)
..+.+||..+..... .+.........+.+ ++ . +++.|+.+ ..+.+||+.+.+-... +...
T Consensus 173 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~ 241 (302)
T 2xn4_A 173 STVECYNATTNEWTYIAEMSTRRSGAGVGVL--NN--------L-LYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC 241 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------E-EEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC
T ss_pred cEEEEEeCCCCcEEECCCCccccccccEEEE--CC--------E-EEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc
Confidence 347888887765432 11111111111111 22 2 44455543 3688999887643221 1111
Q ss_pred CCCEEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCe
Q 010759 430 REPVYSLAFSPTGEYLASGSLDK-----SMHIWSLKEGK 463 (502)
Q Consensus 430 ~~~v~~l~~spdg~~lasgs~Dg-----~i~iw~~~~~~ 463 (502)
......+.+ ++++++.||.++ .|.+||+.+.+
T Consensus 242 r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 242 RRNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred cccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 111122223 567777777653 48888887654
No 315
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.21 E-value=0.51 Score=43.36 Aligned_cols=221 Identities=9% Similarity=0.114 Sum_probs=107.3
Q ss_pred CEEEEEECC--CcEEEEECCCceeEeecC---CCCCEEEEEecCCCCEEEEecCC----CeEEEEeccCcceeEEeeecc
Q 010759 226 TLLATGSYD--GQARIWSTNGDLKCTLSK---HKGPIFSLKWNKKGDYLLTGSCD----KTAIVWDVKTEEWKQQFEFHS 296 (502)
Q Consensus 226 ~~l~sg~~d--g~i~iw~~~~~~~~~~~~---h~~~V~~l~~~~~~~~l~sgs~D----~~v~iwd~~~~~~~~~~~~~~ 296 (502)
.+++.|+.+ ..+.+||.....-..+.. ....-..+.+ ++..++.|+.+ ..+.+||+.+.+|...-....
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~ 90 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW--DNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPT 90 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE--TTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSS
T ss_pred eEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE--CCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCc
Confidence 455566653 567788876543222211 1111112222 45566677654 678899999988765432211
Q ss_pred cC-eEEEecCCCceEEEEcCC------CeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEEEeC---------C
Q 010759 297 GP-TLDVDWRNNVSFATSSTD------NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSD---------D 358 (502)
Q Consensus 297 ~~-~~~~~~~~~~~~~~~~~d------~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~sgs~---------d 358 (502)
.. -......++..++.++.+ ..+.+++..+..-.. .+......-.++. .++++++.|+. -
T Consensus 91 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~ 168 (306)
T 3ii7_A 91 PRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVE--ANGLIYVCGGSLGNNVSGRVL 168 (306)
T ss_dssp CCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCEESCTTTCEEC
T ss_pred cccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEE--ECCEEEEECCCCCCCCccccc
Confidence 11 011122245555665543 457777776543111 1111111111222 26677777764 2
Q ss_pred CcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEE--EeeCC
Q 010759 359 VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLY--SLNGH 429 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~--~~~~h 429 (502)
..+.+||..+...... +.........+.+ ++ . +++.|+.+ ..+.+||+.+.+=.. .+...
T Consensus 169 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~ 237 (306)
T 3ii7_A 169 NSCEVYDPATETWTELCPMIEARKNHGLVFV--KD--------K-IFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK 237 (306)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------E-EEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC
T ss_pred ceEEEeCCCCCeEEECCCccchhhcceEEEE--CC--------E-EEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC
Confidence 3478888877654321 1111011111111 22 2 34444432 358889987654221 12111
Q ss_pred CCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010759 430 REPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 463 (502)
Q Consensus 430 ~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 463 (502)
......+.+ ++++++.||.+ ..|.+||+.+.+
T Consensus 238 r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 238 GVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp BSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTE
T ss_pred ccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 222233334 56788888854 468889987754
No 316
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.20 E-value=0.28 Score=45.11 Aligned_cols=209 Identities=14% Similarity=0.152 Sum_probs=98.5
Q ss_pred CeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCC-----CeEEEEEcCCCcce--eeecCCCcceeEEEEcC
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPI--KTFAGHQGEVNCVKWDP 347 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~~--~~~~~h~~~v~~v~~~p 347 (502)
..+.+||+.+..|...-...... -..+...++..++.++.+ ..+.+++..+..-. ..+........++.+
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL-- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--
Confidence 35788888887765532111110 011122244555555533 34677776554311 111111111122222
Q ss_pred CCCEEEEEeCCC-----cEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC-------CCeEE
Q 010759 348 TGSLLASCSDDV-----TAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-------DSTVK 413 (502)
Q Consensus 348 ~~~~l~sgs~dg-----~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~-------dg~i~ 413 (502)
++.+++.|+.++ .+.+||..+...... +.........+.+ ++ .+++ .|+. -..+.
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~iyv-~GG~~~~~~~~~~~~~ 176 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG--------LLYA-VGGYDVASRQCLSTVE 176 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------EEEE-ECCEETTTTEECCCEE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC--------EEEE-EeCCCCCCCccccEEE
Confidence 577777777654 467888876654321 1111111111111 22 2344 3433 23588
Q ss_pred EEeCCCCeEEE--EeeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecC-CCEEEEEECCCC
Q 010759 414 LWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGN-GGIFEVCWNKEG 483 (502)
Q Consensus 414 iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~-~~i~~~~ws~~g 483 (502)
+||+.+.+-.. .+.........+.+ ++++++.||.+ ..+.+||+.+.+-... .... .....+. -++
T Consensus 177 ~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~ 252 (302)
T 2xn4_A 177 CYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNG 252 (302)
T ss_dssp EEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETT
T ss_pred EEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECC
Confidence 88987664322 12211112223333 56777888765 3689999887653322 1111 1111222 266
Q ss_pred CEEEEEECCC-----eEEEEEee
Q 010759 484 DKIAACFANH-----TVCVLDFR 501 (502)
Q Consensus 484 ~~la~~~~~~-----~v~v~~~~ 501 (502)
+.++.|+.++ .|.+||..
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~ 275 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPT 275 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETT
T ss_pred EEEEECCcCCCcccccEEEEcCC
Confidence 7777776553 47788753
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.19 E-value=0.39 Score=45.15 Aligned_cols=152 Identities=14% Similarity=0.155 Sum_probs=84.4
Q ss_pred ecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCce--eeec----ccCCCcEEEEEEccCCCCCCCCCCcEEEE-E
Q 010759 333 FAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKY--VHDL----REHSKEIYTIRWSPTGSGTNNPNQQLILA-S 405 (502)
Q Consensus 333 ~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~--~~~~----~~~~~~i~~~~~sp~g~~~~~~~~~~~l~-s 405 (502)
+...-.....|+|.|+|.++++-...|.|++++...+.. +..+ .........++++|+-.. +..+|+. +
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~----~g~lYv~yt 102 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYAS----DHMVYAYFT 102 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHH----HCEEEEEEE
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEecccccc----CCEEEEEEe
Confidence 333344567899999999888776689999998655443 2211 122456788999985110 0112332 2
Q ss_pred EeCCCeEEEEeCCC----------CeEEEE-eeC-CCCCEEEEEECCCCCEEEEEeC-------------CCcEEEEeCC
Q 010759 406 ASFDSTVKLWDVEL----------GKLLYS-LNG-HREPVYSLAFSPTGEYLASGSL-------------DKSMHIWSLK 460 (502)
Q Consensus 406 gs~dg~i~iwd~~~----------~~~~~~-~~~-h~~~v~~l~~spdg~~lasgs~-------------Dg~i~iw~~~ 460 (502)
...++.|.-|.+.. .+.+.. +.. ....-..|+|.|||.+.++.+. -|.|.-.+..
T Consensus 103 ~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~d 182 (347)
T 3das_A 103 SASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTGESGDTGLSQDRKSLGGKILRMTPD 182 (347)
T ss_dssp CSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECBCTTCGGGTTCTTCSTTCEEEECTT
T ss_pred cCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEECCCCCCccccCCCCCCCEEEEEeCC
Confidence 12344454454433 223332 321 1113467999999988777553 2344444433
Q ss_pred CCee--------EEEE-ecCCCEEEEEECCCCCEEEEE
Q 010759 461 EGKI--------VKTY-TGNGGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 461 ~~~~--------~~~~-~~~~~i~~~~ws~~g~~la~~ 489 (502)
|+. ...+ .+......++|+|+|.+.++=
T Consensus 183 -G~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~L~~~d 219 (347)
T 3das_A 183 -GEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQRLFASE 219 (347)
T ss_dssp -SSBCTTCSSTTCCEEEBCCSBCCEEEECTTCCEEEEE
T ss_pred -CCccCCCCCCCCeEEeeCCCCcceEEECCCCCEEEEe
Confidence 221 1122 234456789999998766554
No 318
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.18 E-value=0.88 Score=42.98 Aligned_cols=54 Identities=19% Similarity=0.321 Sum_probs=34.2
Q ss_pred ceeEEEEcC-------CCCEEEEEeCCCcEEEEeCCCCceeee--c-ccCCCcEEEEEEccCCC
Q 010759 339 EVNCVKWDP-------TGSLLASCSDDVTAKIWNMKQDKYVHD--L-REHSKEIYTIRWSPTGS 392 (502)
Q Consensus 339 ~v~~v~~~p-------~~~~l~sgs~dg~i~iwd~~~~~~~~~--~-~~~~~~i~~~~~sp~g~ 392 (502)
....+.|.. +|.++++.-..+.|...++..++.+.. + ......+..+++.|+|.
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 456677753 467777776777777777765543322 1 12234678888888885
No 319
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=96.17 E-value=0.37 Score=44.33 Aligned_cols=217 Identities=6% Similarity=0.012 Sum_probs=104.9
Q ss_pred EEEEecC--CCeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcCC----CeEEEEEcCCCccee--eecCCCc
Q 010759 268 YLLTGSC--DKTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSSTD----NMIYVCKIGENRPIK--TFAGHQG 338 (502)
Q Consensus 268 ~l~sgs~--D~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d----~~i~~~~~~~~~~~~--~~~~h~~ 338 (502)
.++.|+. ...+.+||+.+.+|...-...... -..+...++..++.++.+ ..+.+++..+..-.. .+.....
T Consensus 14 l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~ 93 (306)
T 3ii7_A 14 RIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRD 93 (306)
T ss_dssp EEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCB
T ss_pred EEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCcccc
Confidence 3445554 357889999998876532211110 011122345556666543 567777776543211 1111111
Q ss_pred ceeEEEEcCCCCEEEEEeCC------CcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeC--
Q 010759 339 EVNCVKWDPTGSLLASCSDD------VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASF-- 408 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~d------g~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~-- 408 (502)
...++.+ ++++++.|+.+ ..+.+||..+...... +.........+.+ ++ .++++ |+.
T Consensus 94 ~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~iyv~-GG~~~ 160 (306)
T 3ii7_A 94 SLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NG--------LIYVC-GGSLG 160 (306)
T ss_dssp SCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT--------EEEEE-CCEES
T ss_pred ceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CC--------EEEEE-CCCCC
Confidence 1122222 67777778765 3588889877654321 1111001111111 22 23443 432
Q ss_pred -------CCeEEEEeCCCCeEEEE--eeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--Eec-C
Q 010759 409 -------DSTVKLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTG-N 471 (502)
Q Consensus 409 -------dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~-~ 471 (502)
-..+.+||+.+.+-... +......-..+.+ ++++++.||.+ ..|.+||+.+.+-... +.. .
T Consensus 161 ~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r 238 (306)
T 3ii7_A 161 NNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKG 238 (306)
T ss_dssp CTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCB
T ss_pred CCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCc
Confidence 34588899887643221 1111111222333 56777777654 3688999887643221 111 1
Q ss_pred CCEEEEEECCCCCEEEEEECC-----CeEEEEEee
Q 010759 472 GGIFEVCWNKEGDKIAACFAN-----HTVCVLDFR 501 (502)
Q Consensus 472 ~~i~~~~ws~~g~~la~~~~~-----~~v~v~~~~ 501 (502)
.....+.+ +++.++.|+.+ ..|.+||..
T Consensus 239 ~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~ 271 (306)
T 3ii7_A 239 VTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTE 271 (306)
T ss_dssp SCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETT
T ss_pred cceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCC
Confidence 11222223 66777777644 457777753
No 320
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.14 E-value=0.74 Score=42.51 Aligned_cols=219 Identities=11% Similarity=0.126 Sum_probs=101.5
Q ss_pred EEEEEECCCcEEEEECCCceeE--eecCC-CCCEEEEEecCCCCEEEEecC----C-------CeEEEEeccCcceeEEe
Q 010759 227 LLATGSYDGQARIWSTNGDLKC--TLSKH-KGPIFSLKWNKKGDYLLTGSC----D-------KTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~--~~~~h-~~~V~~l~~~~~~~~l~sgs~----D-------~~v~iwd~~~~~~~~~~ 292 (502)
+++.|+ ..+.+||.....-. .+... ...-.++. ..++..++.|+. + ..+.+||+.+.+|...-
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLV-TKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEE-CTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEE-EECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC
Confidence 344455 56888887654322 11111 11122333 346666777763 1 12778899988875432
Q ss_pred eecccC-eEEEecCCCceEEEEcCC--------CeEEEEEcCCCcc--eeeecCCCcceeEEEEcCCCCEEEEEeC-C--
Q 010759 293 EFHSGP-TLDVDWRNNVSFATSSTD--------NMIYVCKIGENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSD-D-- 358 (502)
Q Consensus 293 ~~~~~~-~~~~~~~~~~~~~~~~~d--------~~i~~~~~~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~sgs~-d-- 358 (502)
...... -..+...++..++.++.+ ..+.+++..+.+= +..+......-.++. .++++++.|+. +
T Consensus 84 ~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~ 161 (315)
T 4asc_A 84 PLPSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDR 161 (315)
T ss_dssp CBSSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTS
T ss_pred CCCcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCC
Confidence 111100 011122244555555521 3577777765421 111111111111222 35677777776 2
Q ss_pred ---CcEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCC-----eEEEEeCCCCeEEEE--e
Q 010759 359 ---VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDS-----TVKLWDVELGKLLYS--L 426 (502)
Q Consensus 359 ---g~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg-----~i~iwd~~~~~~~~~--~ 426 (502)
..+.+||..+..... .+.........+.+ ++ .+++ .|+.++ .+.+||+.+.+-... +
T Consensus 162 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~iyv-~GG~~~~~~~~~~~~yd~~~~~W~~~~~~ 230 (315)
T 4asc_A 162 KCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DG--------RIIV-AAGVTDTGLTSSAEVYSITDNKWAPFEAF 230 (315)
T ss_dssp CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--------EEEE-EEEECSSSEEEEEEEEETTTTEEEEECCC
T ss_pred cccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CC--------EEEE-EeccCCCCccceEEEEECCCCeEEECCCC
Confidence 358888887764432 11111001111111 22 2344 454433 578888877643221 1
Q ss_pred eCCCCCEEEEEECCCCCEEEEEeCCC--------------cEEEEeCCCCe
Q 010759 427 NGHREPVYSLAFSPTGEYLASGSLDK--------------SMHIWSLKEGK 463 (502)
Q Consensus 427 ~~h~~~v~~l~~spdg~~lasgs~Dg--------------~i~iw~~~~~~ 463 (502)
.........+.+ ++++++.||.++ .|.+||+.+.+
T Consensus 231 p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~ 279 (315)
T 4asc_A 231 PQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKK 279 (315)
T ss_dssp SSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTE
T ss_pred CCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCCCh
Confidence 111112223333 567777777642 36778877654
No 321
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.06 E-value=1.1 Score=43.07 Aligned_cols=226 Identities=13% Similarity=0.170 Sum_probs=137.0
Q ss_pred EEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcC-CCcceeeecCCC-
Q 010759 260 LKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGHQ- 337 (502)
Q Consensus 260 l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h~- 337 (502)
.-.||..+.++-=. ..++.++|+.+......+.... ++.=-.|.+...++. -++..|+.|++. ...|++.|.-|.
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks~~~~e-~VvfWkWis~~~l~l-VT~taVyHWsi~~~s~P~kvFdR~~~ 147 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVAL-VTDNAVYHWSMEGESQPVKMFDRHSS 147 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEEEECSS-CCCEEEEEETTEEEE-ECSSEEEEEESSSSCCCEEEEECCGG
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcceecCC-CceEEEecCCCeEEE-EcCCeeEEecccCCCCchhheecchh
Confidence 34678777665443 6899999999988777776644 343445544444432 245689999996 456888887764
Q ss_pred ---cceeEEEEcCCCCEEEEEeC-------CCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe
Q 010759 338 ---GEVNCVKWDPTGSLLASCSD-------DVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS 407 (502)
Q Consensus 338 ---~~v~~v~~~p~~~~l~sgs~-------dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs 407 (502)
..|..-..+++.++++..+- .|.+.+|....+ .-+.+.+|......+.. +|. +....+++-+.
T Consensus 148 L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-~sQ~ieGhaa~F~~~~~--~g~----~~~~~lf~fa~ 220 (494)
T 1bpo_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKM--EGN----AEESTLFCFAV 220 (494)
T ss_dssp GTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTC-CEEEECCSEEEEEEEEC--TTC----SSEEEEEEEEE
T ss_pred cccceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccc-ccchheeeeeeeEEEec--CCC----CCCceEEEEEE
Confidence 35667777889998764432 467889987644 33445566554444433 221 11112444444
Q ss_pred CC---CeEEEEeCCCC--------eEEEEe----eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEec-C
Q 010759 408 FD---STVKLWDVELG--------KLLYSL----NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYTG-N 471 (502)
Q Consensus 408 ~d---g~i~iwd~~~~--------~~~~~~----~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~~-~ 471 (502)
.. +.++|-++... +....+ ..-.+.--++..|+.-..+..-+.-|.|++||+.+|..+..-.- .
T Consensus 221 r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDleTgt~i~~nrIs~ 300 (494)
T 1bpo_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIYMNRISG 300 (494)
T ss_dssp CSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred ecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecccceeeeeecccC
Confidence 43 68888887532 111111 11123345677777777777888999999999999998755432 2
Q ss_pred CCEEEEEECCCCCEEEEEECCCeE
Q 010759 472 GGIFEVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 472 ~~i~~~~ws~~g~~la~~~~~~~v 495 (502)
..|+..+-+....-+..--..|.|
T Consensus 301 ~~iF~t~~~~~~~Gi~~Vnr~GqV 324 (494)
T 1bpo_A 301 ETIFVTAPHEATAGIIGVNRKGQV 324 (494)
T ss_dssp SCEEEEEEETTTTEEEEEETTCEE
T ss_pred CceEEecccCCCCcEEEEccCceE
Confidence 345554444444444444455544
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.032 Score=52.37 Aligned_cols=193 Identities=11% Similarity=0.012 Sum_probs=101.9
Q ss_pred CEEEEecCCCeEEEEeccCcceeEEeeec-ccCeEEEecC----CCceEEEE-cCCCeEEEEEcCCCcceeeecC----C
Q 010759 267 DYLLTGSCDKTAIVWDVKTEEWKQQFEFH-SGPTLDVDWR----NNVSFATS-STDNMIYVCKIGENRPIKTFAG----H 336 (502)
Q Consensus 267 ~~l~sgs~D~~v~iwd~~~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~-~~d~~i~~~~~~~~~~~~~~~~----h 336 (502)
..++.++.||.|.-.|..+|+..-++... ..++...... +...++.. ..||.++.++..++.....+.- .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 46889999999999999999877766554 1233322111 12334443 5899999998776533222210 1
Q ss_pred CcceeE---EEE-----cCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCC--cE-----EEEEEccCCCCCCCCCCcE
Q 010759 337 QGEVNC---VKW-----DPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSK--EI-----YTIRWSPTGSGTNNPNQQL 401 (502)
Q Consensus 337 ~~~v~~---v~~-----~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~--~i-----~~~~~sp~g~~~~~~~~~~ 401 (502)
..++.. ... ...+..+++|+.+|++.-.|+.+|+.+..+..... .+ .|.+...-.. .....
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~----d~~~~ 166 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKL----QECEN 166 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC------------------------CC
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCccccccccccccccccccc----ccCCC
Confidence 111111 000 01455788999999999999999998877654221 00 0111000000 00001
Q ss_pred EEEEEeCCCeEEEEeCCCCeEEEEe-----eCCCCC--E-EEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 402 ILASASFDSTVKLWDVELGKLLYSL-----NGHREP--V-YSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 402 ~l~sgs~dg~i~iwd~~~~~~~~~~-----~~h~~~--v-~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
.|+.|..+..+.+.+ ++|+ ++.+ ...... + ..-.++.|+.++ .++.||.|.-+|..+|..+.
T Consensus 167 ~v~ig~~~y~v~~~~-~sG~-~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~~-~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 167 MIVIGKTIFELGIHS-YDGA-SYNVTYSTWQQNVLDVPLALQNTFSKDGMCI-APFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEEEEEECEECC-TTSC-CCCCEEEEEECCTTTHHHHTTCSSCSSSCCE-EEETTTEEEEECSTTCCEEE
T ss_pred eEEEecceEEEEEEC-CCCC-eEEEecccccccccccccccccccccCCcEE-EECCCCEEEEEECCCCcEEE
Confidence 344555566666655 3343 2221 111000 0 000012346664 47889999999998888765
No 323
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.03 E-value=2.5 Score=46.77 Aligned_cols=305 Identities=12% Similarity=0.114 Sum_probs=147.6
Q ss_pred CCCCCEEEEEeCCCcEEEEecCCCCC-CCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEEEE
Q 010759 163 SPAGSLLASGSGDSTARIWTIADGTS-NGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARIWS 241 (502)
Q Consensus 163 spd~~~l~sgs~D~~i~iW~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~iw~ 241 (502)
..++..++-+..+|.+.+-.+..... .+. ..+....+..+. ....-.++++-.+| +|+.|+..|.-.+|.
T Consensus 283 ~~~~~~~LL~~~~G~l~~l~l~~d~~~~~~---~~V~~l~i~~~~-----~~~~~ssl~~l~~g-~lFvgS~~Gds~l~~ 353 (1158)
T 3ei3_A 283 DPNGSRYLLGDMEGRLFMLLLEKEEQMDGT---VTLKDLRVELLG-----ETSIAECLTYLDNG-VVFVGSRLGDSQLVK 353 (1158)
T ss_dssp STTSSEEEEEETTCEEEEEEEEEEC--------CEEEEEEEEEEE-----ECSCCSEEEECSTT-EEEEECSSSCEEEEE
T ss_pred ecCCCEEEEEeCCCCEEEEEEEEcCCccCc---eeEEEEEEEEcC-----CccCccEEEEECCC-EEEEEEecCCcEEEE
Confidence 33556677777889887665532110 000 001111111111 11223567776655 788899888888887
Q ss_pred CCCc---------eeEeecCCCCCEEEEEecCC----CCEEEEec---CCCeEEEEeccCcceeE---Eeeecc-cCeEE
Q 010759 242 TNGD---------LKCTLSKHKGPIFSLKWNKK----GDYLLTGS---CDKTAIVWDVKTEEWKQ---QFEFHS-GPTLD 301 (502)
Q Consensus 242 ~~~~---------~~~~~~~h~~~V~~l~~~~~----~~~l~sgs---~D~~v~iwd~~~~~~~~---~~~~~~-~~~~~ 301 (502)
.... ....+. .-+||..++.-.. ...|++++ .+|++++.- .+--.. .+.... ..+..
T Consensus 354 ~~~~~~~~~~~~~~~~~~~-N~~PI~D~~v~d~~~~~~~~i~~~sG~g~~gsL~~lr--~Gi~~~~~~~~~l~gv~~iWt 430 (1158)
T 3ei3_A 354 LNVDSNEQGSYVVAMETFT-NLGPIVDMCVVDLERQGQGQLVTCSGAFKEGSLRIIR--NGIGIHEHASIDLPGIKGLWP 430 (1158)
T ss_dssp ECSSCCTTSCCEEEEEEEC-CCCSEEEEEEECTTSSSCCEEEEEECCGGGCEEEEEE--ESBCEEEEEEECCCSCCEEEE
T ss_pred EecCCCCccceEEeEeeec-CcCCceeEEEEccCCCCCCeEEEEECcCCCCeEEEEe--cCCCEEEEEeecCCCccEEEE
Confidence 5421 122333 3478888876432 24666554 457888763 221111 111110 11111
Q ss_pred EecC----CCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEe---------CCCcEEEEeCCC
Q 010759 302 VDWR----NNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCS---------DDVTAKIWNMKQ 368 (502)
Q Consensus 302 ~~~~----~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs---------~dg~i~iwd~~~ 368 (502)
+... .+..++.+..+.+ .++.+... .+.... ...|..+...|+++. ....|++.+...
T Consensus 431 l~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e-~veev~-------~~gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~ 501 (1158)
T 3ei3_A 431 LRSDPNRETDDTLVLSFVGQT-RVLMLNGE-EVEETE-------LMGFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEP 501 (1158)
T ss_dssp ECCCSSCSSCCEEEEEETTEE-EEEEEETT-EEEEEC-------CTTCCSSSCEEEEEEETTTEEEEEESSCEEEEESSS
T ss_pred EeecCCCCCCCEEEEECCCCe-EEEEEeCC-cccccc-------cccccCCCCcEEEEEcCCCeEEEEecCEEEEEECCC
Confidence 2111 1223444433333 33333111 111111 001112222333222 123456666544
Q ss_pred CceeeecccCC-CcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEE-eeCCCCCEEEEEECCC-----
Q 010759 369 DKYVHDLREHS-KEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYS-LNGHREPVYSLAFSPT----- 441 (502)
Q Consensus 369 ~~~~~~~~~~~-~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~-~~~h~~~v~~l~~spd----- 441 (502)
...+..+.... ..|...+... . .++.++ .+.+.++.+..++.... -..-...|.|+++.|.
T Consensus 502 ~~~~~~w~~p~~~~I~~As~n~----------~-~vvva~-g~~l~~fel~~~~L~~~~~~~l~~evscl~i~~~~~~~~ 569 (1158)
T 3ei3_A 502 KALVSEWKEPQAKNISVASCNS----------S-QVVVAV-GRALYYLQIHPQELRQISHTEMEHEVACLDITPLGDSNG 569 (1158)
T ss_dssp CCEEEEECCTTCCCCCEEEECS----------S-EEEEEE-TTEEEEEEEETTEEEEEEEEECSSCEEEEECCCCSSSTT
T ss_pred CeEEEEEECCCCCEEEEEEeCC----------C-EEEEEE-CCEEEEEEeeCCceeeecccCCCCceEEEEeecCCCCcc
Confidence 44444443222 2333333221 1 233334 57888887766543211 1123457999999864
Q ss_pred -CCEEEEEeC-CCcEEEEeCCCCeeEEEEec--CCCEEEEEEC--CCCCEEEEEECCCeEEEEEe
Q 010759 442 -GEYLASGSL-DKSMHIWSLKEGKIVKTYTG--NGGIFEVCWN--KEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 442 -g~~lasgs~-Dg~i~iw~~~~~~~~~~~~~--~~~i~~~~ws--~~g~~la~~~~~~~v~v~~~ 500 (502)
+.++|.|.+ |++|+|+++.+.+.+....- .....+++.. ...-+|..|..||.+..+.+
T Consensus 570 ~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 570 LSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp CCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred cccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 479999997 99999999987665543322 2233344332 22358889999998866654
No 324
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.86 E-value=0.6 Score=43.16 Aligned_cols=204 Identities=9% Similarity=0.041 Sum_probs=95.4
Q ss_pred EEEecCCCeEEEEeccCcceeEEeeecc---cCeEEEecCCCceEEEEcC-----C------CeEEEEEcCCCcce--ee
Q 010759 269 LLTGSCDKTAIVWDVKTEEWKQQFEFHS---GPTLDVDWRNNVSFATSST-----D------NMIYVCKIGENRPI--KT 332 (502)
Q Consensus 269 l~sgs~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-----d------~~i~~~~~~~~~~~--~~ 332 (502)
++.|+ ..+.+||+.+.+|.. ..... ..-.++...++..++.++. . ..++.++..+.+-. ..
T Consensus 8 ~~~GG--~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 84 (315)
T 4asc_A 8 FMISE--EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPP 84 (315)
T ss_dssp EEEET--TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCC
T ss_pred EEEcC--CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCC
Confidence 44555 679999999998864 22111 1112333345555555552 1 12566666554311 11
Q ss_pred ecCCCcceeEEEEcCCCCEEEEEeCC--------CcEEEEeCCCCceee--ecccCCCcEEEEEEccCCCCCCCCCCcEE
Q 010759 333 FAGHQGEVNCVKWDPTGSLLASCSDD--------VTAKIWNMKQDKYVH--DLREHSKEIYTIRWSPTGSGTNNPNQQLI 402 (502)
Q Consensus 333 ~~~h~~~v~~v~~~p~~~~l~sgs~d--------g~i~iwd~~~~~~~~--~~~~~~~~i~~~~~sp~g~~~~~~~~~~~ 402 (502)
+.........+.+ ++.+++.|+.+ ..+.+||..+.+... .+.........+. .++ . +
T Consensus 85 ~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~--------~-i 151 (315)
T 4asc_A 85 LPSPRCLFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMD--------L-V 151 (315)
T ss_dssp BSSCEESCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETT--------E-E
T ss_pred CCcchhceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECC--------E-E
Confidence 1111111112222 56777777742 357888887764322 1111100111111 122 2 3
Q ss_pred EEEEeC-C-----CeEEEEeCCCCeEEE--EeeCCCCCEEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCeeEEEE-
Q 010759 403 LASASF-D-----STVKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLDK-----SMHIWSLKEGKIVKTY- 468 (502)
Q Consensus 403 l~sgs~-d-----g~i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~Dg-----~i~iw~~~~~~~~~~~- 468 (502)
++.|+. + ..+.+||+.+.+-.. .+......-..+.+ ++++++.||.++ .+.+||+.+.+-...-
T Consensus 152 yv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 229 (315)
T 4asc_A 152 YVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKWAPFEA 229 (315)
T ss_dssp EEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEEEEECC
T ss_pred EEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeEEECCC
Confidence 444544 2 368888887654221 11111111222333 567778887654 5889998876433221
Q ss_pred -ecC-CCEEEEEECCCCCEEEEEECC
Q 010759 469 -TGN-GGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 469 -~~~-~~i~~~~ws~~g~~la~~~~~ 492 (502)
... .....+. -+++.++.|+.+
T Consensus 230 ~p~~r~~~~~~~--~~~~l~v~GG~~ 253 (315)
T 4asc_A 230 FPQERSSLSLVS--LVGTLYAIGGFA 253 (315)
T ss_dssp CSSCCBSCEEEE--ETTEEEEEEEEE
T ss_pred CCCcccceeEEE--ECCEEEEECCcc
Confidence 111 1112222 256777777653
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.73 E-value=0.43 Score=41.40 Aligned_cols=139 Identities=11% Similarity=0.031 Sum_probs=78.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeecccCCCc--------EEEEEEccCCCCCCCCCCcEEEEEEeCCC
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDLREHSKE--------IYTIRWSPTGSGTNNPNQQLILASASFDS 410 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~--------i~~~~~sp~g~~~~~~~~~~~l~sgs~dg 410 (502)
.+..++|+|+|.+.+. .+|.+.-.+..+..... ....... ..++.|.|+|. +.++ .||
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~-W~~s~t~IG~~Gw~~F~a~~fD~~G~---------LYav--~dG 107 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDN-WMGRAKKIGNGGWNQFQFLFFDPNGY---------LYAV--SKD 107 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHHHCEEEECSCGGGCSEEEECTTSC---------EEEE--ETT
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCccc-ccccccEecccccccceEEEECCCCC---------EEEe--CCC
Confidence 5669999999997776 66766555543321111 1111122 25678888884 2233 569
Q ss_pred eEEEEeCCC-CeEE-----EEe-eCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCe------eEEEEe-cC-CCEE
Q 010759 411 TVKLWDVEL-GKLL-----YSL-NGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGK------IVKTYT-GN-GGIF 475 (502)
Q Consensus 411 ~i~iwd~~~-~~~~-----~~~-~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~------~~~~~~-~~-~~i~ 475 (502)
.|+-++..+ +..- ..+ .+--..+..|.|.|+|.+.|.. |+.++-+....+. ....+- .. ....
T Consensus 108 ~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr 185 (236)
T 1tl2_A 108 KLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFK 185 (236)
T ss_dssp EEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEE
T ss_pred EEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEE
Confidence 998777532 1110 111 1112457999999999988777 7775444333211 111111 11 1234
Q ss_pred EEEECCCCCEEEEEECCCeE
Q 010759 476 EVCWNKEGDKIAACFANHTV 495 (502)
Q Consensus 476 ~~~ws~~g~~la~~~~~~~v 495 (502)
.+.|.|+|.+.++. ++.+
T Consensus 186 ~l~f~~~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 186 FLFFSSVGTLFGVQ--GGKF 203 (236)
T ss_dssp EEEECTTSCEEEEE--TTEE
T ss_pred EEEECCCCcEEEEe--CCeE
Confidence 57799999888777 6654
No 326
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=95.36 E-value=0.86 Score=41.51 Aligned_cols=220 Identities=13% Similarity=0.023 Sum_probs=109.2
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
.|..++-.....+++ . ||.|+.|-.+. ++-. .......|..++..... .++. . ||.|..|-..........
T Consensus 25 ~i~~ia~G~~h~~~l--~-~G~v~~wG~n~~Gqlg~-p~~~~~~i~~ia~G~~h-s~~l-~-~G~v~~wG~n~~Gqlg~P 97 (282)
T 3qhy_B 25 GVDAIAGGYFHGLAL--K-GGKVLGWGANLNGQLTM-PAATQSGVDAIAAGNYH-SLAL-K-DGEVIAWGGNEDGQTTVP 97 (282)
T ss_dssp SCCEEEECSSEEEEE--E-TTEEEEEECCSSSTTSC-CGGGGSCCCEEEECSSE-EEEE-E-TTEEEEEECCTTSTTCCC
T ss_pred CCcEEEeCCCeEEEE--E-CCEEEEEeCCCCCCCCC-CccCCCCEEEEEeCCCE-EEEE-E-CCEEEEeeCCCCCCCCCC
Confidence 455665544333333 4 89999997542 2111 11112356666654432 3333 4 899999965432111100
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
......+..+..-....++.. ++.++.|-......+-.-......|..++......++ -. ||.+..|-......+
T Consensus 98 ~~~~~~v~~ia~G~~hs~al~--~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~~~~--l~-~G~v~~wG~n~~gql 172 (282)
T 3qhy_B 98 AEARSGVDAIAAGAWASYALK--DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYTALA--VK-NGGVIAWGDNYFGQT 172 (282)
T ss_dssp GGGSSSEEEEEEETTEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEEEE--EE-TTEEEEEECCTTSTT
T ss_pred cccCCCeEEEECcCCEEEEEe--CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCEEEE--EE-CCEEEEecCCCCCCC
Confidence 011124455554444445544 8999999765432211111122356666665433322 33 799999976543222
Q ss_pred eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCC
Q 010759 373 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDK 452 (502)
Q Consensus 373 ~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg 452 (502)
..-......|..++.... ..++. .||.|..|-....-.+-.-......|..|+......++++ ||
T Consensus 173 g~p~~~~~~v~~i~~G~~----------hs~al--~~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~h~~al~---~g 237 (282)
T 3qhy_B 173 TVPAEAQSGVDDVAGGIF----------HSLAL--KDGKVIAWGDNRYKQTTVPTEALSGVSAIASGEWYSLALK---NG 237 (282)
T ss_dssp SCCGGGGSSEEEEEECSS----------EEEEE--ETTEEEEEECCTTSTTCCCGGGGSSCCEEEECSSCEEEEE---TT
T ss_pred CCceecCCCeEEEEecCC----------EEEEE--ECCeEEEEECCCCCCCCCCcccCCCceEEEcCCCEEEEEE---CC
Confidence 111112345666664332 23444 4899999965432111000011235777776554333333 99
Q ss_pred cEEEEeCCC
Q 010759 453 SMHIWSLKE 461 (502)
Q Consensus 453 ~i~iw~~~~ 461 (502)
.|..|=...
T Consensus 238 ~v~~wG~n~ 246 (282)
T 3qhy_B 238 KVIAWGSSR 246 (282)
T ss_dssp EEEEESTTC
T ss_pred EEEEecCCC
Confidence 999997654
No 327
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=95.28 E-value=1.3 Score=40.80 Aligned_cols=225 Identities=13% Similarity=0.124 Sum_probs=106.0
Q ss_pred CCCCEEEEEECC----CcEEEEECCCceeEeecCCCCC--EEEEEecCCCCEEEEecC----C-----CeEEEEeccCcc
Q 010759 223 GEGTLLATGSYD----GQARIWSTNGDLKCTLSKHKGP--IFSLKWNKKGDYLLTGSC----D-----KTAIVWDVKTEE 287 (502)
Q Consensus 223 ~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~~h~~~--V~~l~~~~~~~~l~sgs~----D-----~~v~iwd~~~~~ 287 (502)
-++.+++.||.+ ..+.++|.....-..+..-..+ -.+++.. ++..++.|+. + ..+.+||+.+.+
T Consensus 23 ~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 23 VGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGCVV-GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEEEE-CCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 355667777642 3677888765433322111100 0112212 4556666665 2 468899999888
Q ss_pred eeEEeeecccC-eEEEecCCCceEEEEcCC-----CeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEEEeCC-
Q 010759 288 WKQQFEFHSGP-TLDVDWRNNVSFATSSTD-----NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD- 358 (502)
Q Consensus 288 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d-----~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~sgs~d- 358 (502)
|...-...... -..+...++..++.++.+ ..+.+++..+..-.. .+......-.++.+ ++.+++.|+.+
T Consensus 102 W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~ 179 (308)
T 1zgk_A 102 WSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDG 179 (308)
T ss_dssp EEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCS
T ss_pred EeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCC
Confidence 76542211110 011112244455554422 356677765543111 11111111122222 67777777765
Q ss_pred ----CcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----CeEEEEeCCCCeEEE--E
Q 010759 359 ----VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----STVKLWDVELGKLLY--S 425 (502)
Q Consensus 359 ----g~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~i~iwd~~~~~~~~--~ 425 (502)
..+.+||..+...... +.........+.+ ++ . +++.|+.+ ..+.+||+.+.+-.. .
T Consensus 180 ~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~ 248 (308)
T 1zgk_A 180 TNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HN--------C-IYAAGGYDGQDQLNSVERYDVETETWTFVAP 248 (308)
T ss_dssp SCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--------E-EEEECCBCSSSBCCCEEEEETTTTEEEECCC
T ss_pred CCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CC--------E-EEEEeCCCCCCccceEEEEeCCCCcEEECCC
Confidence 3578888876654321 1111111111121 22 2 44455543 468899988764322 1
Q ss_pred eeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010759 426 LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 463 (502)
Q Consensus 426 ~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 463 (502)
+.........+.+ ++++++.||.+ ..|.+||+.+.+
T Consensus 249 ~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 249 MKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCCCE
Confidence 1111111222333 56777777754 357788877654
No 328
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.27 E-value=0.25 Score=47.41 Aligned_cols=125 Identities=12% Similarity=0.127 Sum_probs=78.5
Q ss_pred ceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCC--CCCceEEEEEeeecccccCCCCeEEEEECCC---CCEEEE
Q 010759 156 EVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQ--NGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---GTLLAT 230 (502)
Q Consensus 156 ~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~---~~~l~s 230 (502)
.|..+..||+|++||..+ +..|.|-.+..+....... ..++.... ..+.........+|..+.|+|- +..|++
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~t-y~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFH-YSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEE-EEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccccceeE-EEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 578899999999999885 5688898887543222110 02222211 1111111123578999999994 568999
Q ss_pred EECCCcEEEEECCCc--eeEeec---------CCCCCEEEEEecCCCCEEEE--ecCCCeEEEEe
Q 010759 231 GSYDGQARIWSTNGD--LKCTLS---------KHKGPIFSLKWNKKGDYLLT--GSCDKTAIVWD 282 (502)
Q Consensus 231 g~~dg~i~iw~~~~~--~~~~~~---------~h~~~V~~l~~~~~~~~l~s--gs~D~~v~iwd 282 (502)
-..|+.||+||+... ....+. .....|.+++|.+++-.|+. .+..|-|+-.-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 999999999997641 111222 12256888999987755555 44777776543
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.26 E-value=2.7 Score=46.80 Aligned_cols=197 Identities=12% Similarity=0.194 Sum_probs=115.4
Q ss_pred EEecCCCCEEEEecCCCeEEEEeccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcC-CCcceeeecCC--
Q 010759 260 LKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIG-ENRPIKTFAGH-- 336 (502)
Q Consensus 260 l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~-~~~~~~~~~~h-- 336 (502)
.-.||..+.++.=+ ..++.|+|+.+......+.... +|.=-.|.+...++.. ++..|+.|++. ...|++.|.-|
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~~~e-~VvfWkWis~~~l~lV-T~~aVyHW~~~~~s~P~k~fdR~~~ 147 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD-DVTFWKWISLNTVALV-TDNAVYHWSMEGESQPVKMFDRHSS 147 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccccCC-CceEEEecCCCeeEEE-cCCeEEEeccCCCCccHHHHhcchh
Confidence 34577776655443 6899999999887766665533 3444556555444332 35679999996 35677777766
Q ss_pred --CcceeEEEEcCCCCEEEEEe-------CCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEe
Q 010759 337 --QGEVNCVKWDPTGSLLASCS-------DDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASAS 407 (502)
Q Consensus 337 --~~~v~~v~~~p~~~~l~sgs-------~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs 407 (502)
...|..-..+++.++++..| -.|.+.+|+...+. -+.+.+|......+.. +|.. .| ..+++-+.
T Consensus 148 L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-sQ~iegha~~F~~~~~--~~~~--~~--~~l~~f~~ 220 (1630)
T 1xi4_A 148 LAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAASFAQFKM--EGNA--EE--STLFCFAV 220 (1630)
T ss_pred cccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-chhhhHhHhhhheecc--CCCC--CC--ceEEEEEE
Confidence 34566777788888876443 34778888875432 2334455443333332 1111 11 11333222
Q ss_pred C---CCeEEEEeCCCC---eEEEE-------ee--CCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEE
Q 010759 408 F---DSTVKLWDVELG---KLLYS-------LN--GHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVK 466 (502)
Q Consensus 408 ~---dg~i~iwd~~~~---~~~~~-------~~--~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~ 466 (502)
. .+.++|-++... ...+. +. .-.+.--++..|+.-..+..-+.-|.|++||+.+|..+.
T Consensus 221 ~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 221 RGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred ecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhhh
Confidence 2 267888887432 11111 00 111223445666666667777888999999999998653
No 330
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.21 E-value=1.9 Score=39.83 Aligned_cols=204 Identities=15% Similarity=0.221 Sum_probs=128.3
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEE
Q 010759 160 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 239 (502)
Q Consensus 160 ~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~i 239 (502)
.-.+|..+.||--. ..++.|+|+.+.... +.+. -..+|..-.|-.+..+-+.. +..|+-
T Consensus 72 AIMnP~~~ViALra-g~~LQiFnletK~kl-------------ks~~-----~~e~VvfWkWis~~~L~lVT--~taVyH 130 (365)
T 2xzh_A 72 AIMNPASKVIALKA-GKTLQIFNIEMKSKM-------------KAHT-----MTDDVTFWKWISLNTVALVT--DNAVYH 130 (365)
T ss_dssp EEECSSSSEEEEEE-TTEEEEEETTTTEEE-------------EEEE-----CSSCEEEEEECSSSEEEEEE--SSEEEE
T ss_pred eeeCCCccEEEEec-CCeEEEechHHhhhh-------------ccee-----cCCccEEEEecCCCeEEEEc--CCcEEE
Confidence 44688888777765 578999999875321 1111 13468888887765554443 358999
Q ss_pred EECCC--ceeEeecCCC----CCEEEEEecCCCCEEEEec-------CCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 240 WSTNG--DLKCTLSKHK----GPIFSLKWNKKGDYLLTGS-------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 240 w~~~~--~~~~~~~~h~----~~V~~l~~~~~~~~l~sgs-------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
|++++ .....+..|. ..|..-+.+++.++++..+ -.|.+.+|..+. ...+.+++|.+....+....
T Consensus 131 Ws~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g 209 (365)
T 2xzh_A 131 WSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEG 209 (365)
T ss_dssp EESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT-TEEEEECCSEEEEEEECCTT
T ss_pred EcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc-cccceeeeeeeeeEEEecCC
Confidence 99864 4455565553 4567777788888765433 236677887654 44566777766655554432
Q ss_pred C----ceEEEE---cCCCeEEEEEcCCC---c------ceeeecCC---CcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 307 N----VSFATS---STDNMIYVCKIGEN---R------PIKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 307 ~----~~~~~~---~~d~~i~~~~~~~~---~------~~~~~~~h---~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
+ ..|+.+ ...+.+++.+++.. . .+..+... ..-.-++..++....+..-+.-|.|.+||+.
T Consensus 210 ~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDle 289 (365)
T 2xzh_A 210 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 289 (365)
T ss_dssp CSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETT
T ss_pred CCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcc
Confidence 2 122222 22358888888543 1 11112211 2334578888888889999999999999999
Q ss_pred CCceeeecccCCCcEEEE
Q 010759 368 QDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~ 385 (502)
++.++..-+-...+|...
T Consensus 290 Tgt~i~~nrIS~d~iF~t 307 (365)
T 2xzh_A 290 TGTCIYMNRISGETIFVT 307 (365)
T ss_dssp TCCEEEEEECCSSCEEEE
T ss_pred cCcEEEEeccCCCceEEe
Confidence 998876655444444433
No 331
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=95.03 E-value=2.7 Score=40.51 Aligned_cols=206 Identities=15% Similarity=0.218 Sum_probs=129.2
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEE
Q 010759 159 ACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQAR 238 (502)
Q Consensus 159 ~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~ 238 (502)
+.-.+|..+.||--. ..++.|+|+.+.... +.+. -..+|..-.|-.+..+-+.+ +..|+
T Consensus 70 sAIMnP~~~iiALra-g~~lQiFnle~K~kl-------------ks~~-----~~e~VvfWkWis~~~l~lVT--~taVy 128 (494)
T 1bpo_A 70 SAIMNPASKVIALKA-GKTLQIFNIEMKSKM-------------KAHT-----MTDDVTFWKWISLNTVALVT--DNAVY 128 (494)
T ss_dssp EEEECSSSSCEEEEE-TTEEEEEETTTTEEE-------------EEEE-----CSSCCCEEEEEETTEEEEEC--SSEEE
T ss_pred eeeeCCCCcEEEEec-CCeEEEEchHHhhhh-------------ccee-----cCCCceEEEecCCCeEEEEc--CCeeE
Confidence 345778888777765 678999999875321 1111 12457777776654443332 46899
Q ss_pred EEECCC--ceeEeecCCC----CCEEEEEecCCCCEEEEec-------CCCeEEEEeccCcceeEEeeecccCeEEEecC
Q 010759 239 IWSTNG--DLKCTLSKHK----GPIFSLKWNKKGDYLLTGS-------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWR 305 (502)
Q Consensus 239 iw~~~~--~~~~~~~~h~----~~V~~l~~~~~~~~l~sgs-------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 305 (502)
-|+..+ .....|..|. ..|..-..+++.++++..+ -.|.+.+|.... ...+.+++|.+....+...
T Consensus 129 HWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~ 207 (494)
T 1bpo_A 129 HWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKME 207 (494)
T ss_dssp EEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECT
T ss_pred EecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecC
Confidence 999864 4555666553 4577777788888865332 236778888654 3456677777665555544
Q ss_pred CC----ceEEEEc---CCCeEEEEEcCCC---c------ceeeecCC---CcceeEEEEcCCCCEEEEEeCCCcEEEEeC
Q 010759 306 NN----VSFATSS---TDNMIYVCKIGEN---R------PIKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNM 366 (502)
Q Consensus 306 ~~----~~~~~~~---~d~~i~~~~~~~~---~------~~~~~~~h---~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~ 366 (502)
.+ ..|+.+. ..+.+++.+++.. . .+..+... ..-..++..++....+..-+.-|.|.+||+
T Consensus 208 g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDl 287 (494)
T 1bpo_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDL 287 (494)
T ss_dssp TCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEET
T ss_pred CCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEec
Confidence 32 1233332 2378899988643 1 11112111 233457888998889999999999999999
Q ss_pred CCCceeeecccCCCcEEEEE
Q 010759 367 KQDKYVHDLREHSKEIYTIR 386 (502)
Q Consensus 367 ~~~~~~~~~~~~~~~i~~~~ 386 (502)
.++.++..-+-...+|...+
T Consensus 288 eTgt~i~~nrIs~~~iF~t~ 307 (494)
T 1bpo_A 288 ETGTCIYMNRISGETIFVTA 307 (494)
T ss_dssp TTCCEEEEEECCSSCEEEEE
T ss_pred ccceeeeeecccCCceEEec
Confidence 99988765554444444433
No 332
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.02 E-value=1.7 Score=40.03 Aligned_cols=179 Identities=11% Similarity=0.107 Sum_probs=83.2
Q ss_pred EEEecCCCeEEEEeccCcceeEEeeecc---cCeEEEecCCCceEEEEcC----CC-------eEEEEEcCCCccee--e
Q 010759 269 LLTGSCDKTAIVWDVKTEEWKQQFEFHS---GPTLDVDWRNNVSFATSST----DN-------MIYVCKIGENRPIK--T 332 (502)
Q Consensus 269 l~sgs~D~~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----d~-------~i~~~~~~~~~~~~--~ 332 (502)
++.|+. .+.+||+.+.+|.. ..... ..-.++...++..++.++. ++ .++.++..+..-.. .
T Consensus 19 ~~~GG~--~~~~yd~~~~~W~~-~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 19 LLVNDT--AAVAYDPMENECYL-TALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEECSS--EEEEEETTTTEEEE-EEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhcccc--ceEEECCCCCceec-ccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344443 47899999888865 22111 1122333445556666652 11 16666665432111 1
Q ss_pred ecCCCcceeEEEEcCCCCEEEEEeCC-------CcEEEEeCCCCceeeecccCCCcE-EEEEEccCCCCCCCCCCcEEEE
Q 010759 333 FAGHQGEVNCVKWDPTGSLLASCSDD-------VTAKIWNMKQDKYVHDLREHSKEI-YTIRWSPTGSGTNNPNQQLILA 404 (502)
Q Consensus 333 ~~~h~~~v~~v~~~p~~~~l~sgs~d-------g~i~iwd~~~~~~~~~~~~~~~~i-~~~~~sp~g~~~~~~~~~~~l~ 404 (502)
+.........+.+ ++.+++.|+.+ ..+.+||..+.+....-....... .++.. .++ .++++
T Consensus 96 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~--------~iyv~ 164 (318)
T 2woz_A 96 LPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNG--------MIYCL 164 (318)
T ss_dssp BSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETT--------EEEEE
T ss_pred CCccccccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECC--------EEEEE
Confidence 1111111112222 56777777754 247788887665432111000000 01111 122 23444
Q ss_pred EEeC-----CCeEEEEeCCCCeEEEE--eeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCe
Q 010759 405 SASF-----DSTVKLWDVELGKLLYS--LNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGK 463 (502)
Q Consensus 405 sgs~-----dg~i~iwd~~~~~~~~~--~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~ 463 (502)
.|.. -..+.+||+.+.+-... +.........+.+ ++++++.||.+ ..+.+||+.+.+
T Consensus 165 GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 165 GGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp CCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred cCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3321 23588899887643221 1111111222333 56777777754 357789987754
No 333
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=94.99 E-value=2.2 Score=39.33 Aligned_cols=140 Identities=11% Similarity=0.079 Sum_probs=64.7
Q ss_pred EEEEEECCCcEEEEECCCceeEe--ecC-CCCCEEEEEecCCCCEEEEecC----CC-------eEEEEeccCcceeEEe
Q 010759 227 LLATGSYDGQARIWSTNGDLKCT--LSK-HKGPIFSLKWNKKGDYLLTGSC----DK-------TAIVWDVKTEEWKQQF 292 (502)
Q Consensus 227 ~l~sg~~dg~i~iw~~~~~~~~~--~~~-h~~~V~~l~~~~~~~~l~sgs~----D~-------~v~iwd~~~~~~~~~~ 292 (502)
+++.|+. .+.+||.....-.. +.. ....-.+++ ..++..++.|+. ++ .+.+||+.+.+|...-
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIV-TQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEE-CSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEE-EECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 3444443 36778876543222 111 111122332 345667777773 12 2778899888876532
Q ss_pred eecccC-eEEEecCCCceEEEEcCC-------CeEEEEEcCCCccee--eecCCCcceeEEEEcCCCCEEEEEeCC----
Q 010759 293 EFHSGP-TLDVDWRNNVSFATSSTD-------NMIYVCKIGENRPIK--TFAGHQGEVNCVKWDPTGSLLASCSDD---- 358 (502)
Q Consensus 293 ~~~~~~-~~~~~~~~~~~~~~~~~d-------~~i~~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~l~sgs~d---- 358 (502)
...... ...+...++..++.++.+ ..+.+++..+.+=.. .+......- +++. .++++++.|+.+
T Consensus 95 ~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~-~~~~-~~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 95 PLPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKVYGH-NVIS-HNGMIYCLGGKTDDKK 172 (318)
T ss_dssp CBSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCEESC-EEEE-ETTEEEEECCEESSSC
T ss_pred CCCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCccccc-EEEE-ECCEEEEEcCCCCCCC
Confidence 211110 111222244555555432 246666665542111 111000011 1222 367777777642
Q ss_pred --CcEEEEeCCCCce
Q 010759 359 --VTAKIWNMKQDKY 371 (502)
Q Consensus 359 --g~i~iwd~~~~~~ 371 (502)
..+.+||..+...
T Consensus 173 ~~~~~~~yd~~~~~W 187 (318)
T 2woz_A 173 CTNRVFIYNPKKGDW 187 (318)
T ss_dssp BCCCEEEEETTTTEE
T ss_pred ccceEEEEcCCCCEE
Confidence 3588899877654
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.89 E-value=0.97 Score=41.56 Aligned_cols=209 Identities=10% Similarity=0.076 Sum_probs=97.9
Q ss_pred CeEEEEeccCcceeEEeeecccC-eEEEecCCCceEEEEcC----C-----CeEEEEEcCCCcce--eeecCCCcceeEE
Q 010759 276 KTAIVWDVKTEEWKQQFEFHSGP-TLDVDWRNNVSFATSST----D-----NMIYVCKIGENRPI--KTFAGHQGEVNCV 343 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----d-----~~i~~~~~~~~~~~--~~~~~h~~~v~~v 343 (502)
..+.+||+.+.+|...-...... -..+...++..++.++. + ..+++++..+..-. ..+........++
T Consensus 39 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~ 118 (308)
T 1zgk_A 39 SYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVG 118 (308)
T ss_dssp CCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEE
T ss_pred ceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEE
Confidence 35788888888776532111110 01112224445555543 2 35677776554311 1111111111222
Q ss_pred EEcCCCCEEEEEeCC-----CcEEEEeCCCCceeee--cccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-----Ce
Q 010759 344 KWDPTGSLLASCSDD-----VTAKIWNMKQDKYVHD--LREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-----ST 411 (502)
Q Consensus 344 ~~~p~~~~l~sgs~d-----g~i~iwd~~~~~~~~~--~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-----g~ 411 (502)
.+ ++++++.|+.+ ..+.+||..+.+.... +.........+.+ ++ . +++.|+.+ ..
T Consensus 119 ~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~--------~-iyv~GG~~~~~~~~~ 185 (308)
T 1zgk_A 119 VI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR--------L-LYAVGGFDGTNRLNS 185 (308)
T ss_dssp EE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT--------E-EEEECCBCSSCBCCC
T ss_pred EE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC--------E-EEEEeCCCCCCcCce
Confidence 22 67777777644 3578888876654321 1111111111111 22 2 34445443 45
Q ss_pred EEEEeCCCCeEEE--EeeCCCCCEEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCeeEEE--EecC-CCEEEEEECC
Q 010759 412 VKLWDVELGKLLY--SLNGHREPVYSLAFSPTGEYLASGSLD-----KSMHIWSLKEGKIVKT--YTGN-GGIFEVCWNK 481 (502)
Q Consensus 412 i~iwd~~~~~~~~--~~~~h~~~v~~l~~spdg~~lasgs~D-----g~i~iw~~~~~~~~~~--~~~~-~~i~~~~ws~ 481 (502)
+.+||+.+.+-.. .+......-..+.+ ++++++.||.+ ..+.+||+.+.+-... +... .....+. -
T Consensus 186 ~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~--~ 261 (308)
T 1zgk_A 186 AECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITV--H 261 (308)
T ss_dssp EEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--E
T ss_pred EEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEE--E
Confidence 8888887654321 11111112223333 56777777765 4699999887653221 1111 1111222 2
Q ss_pred CCCEEEEEECC-----CeEEEEEee
Q 010759 482 EGDKIAACFAN-----HTVCVLDFR 501 (502)
Q Consensus 482 ~g~~la~~~~~-----~~v~v~~~~ 501 (502)
++++++.|+.+ ..|.+||..
T Consensus 262 ~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 262 QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred CCEEEEEcCcCCCcccceEEEEcCC
Confidence 56777777644 356777753
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.86 E-value=0.84 Score=42.70 Aligned_cols=188 Identities=12% Similarity=0.137 Sum_probs=100.8
Q ss_pred CEEEEEECCCcEEEEECC-CceeEeecCC-CCCEEEEEec--CCCCEEEEe--cCCCeEEEEeccCcceeEEeeec----
Q 010759 226 TLLATGSYDGQARIWSTN-GDLKCTLSKH-KGPIFSLKWN--KKGDYLLTG--SCDKTAIVWDVKTEEWKQQFEFH---- 295 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~-~~~~~~~~~h-~~~V~~l~~~--~~~~~l~sg--s~D~~v~iwd~~~~~~~~~~~~~---- 295 (502)
.+++.++.||.|.-.|.. |+....+... ..++....-. +.+..++.+ +.||.|..++..++.....+...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~lv~ 90 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQLVS 90 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHHHT
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeecccccee
Confidence 467888999999999864 5555555432 1233322111 112234433 68999999999888554333221
Q ss_pred ccCeEE-----E-e---cCCCceEEEEcCCCeEEEEEcCCCcceeeecCCC--cc-----eeEEEEc-----CCCCEEEE
Q 010759 296 SGPTLD-----V-D---WRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQ--GE-----VNCVKWD-----PTGSLLAS 354 (502)
Q Consensus 296 ~~~~~~-----~-~---~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~--~~-----v~~v~~~-----p~~~~l~s 354 (502)
..|... + + ...+..+.+++.++.++..+..+++.+..+.... +. ..|.... -.+..|+.
T Consensus 91 ~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~i 170 (339)
T 2be1_A 91 TSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVI 170 (339)
T ss_dssp TCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEE
T ss_pred ccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEE
Confidence 112211 0 0 0145566788889999999999998887775321 11 1122211 12356667
Q ss_pred EeCCCcEEEEeCCCCceeeecccCCCcEEEEEEccCCCC-------CCCCCCcEEEEEEeCCCeEEEEeCCCCeEEE
Q 010759 355 CSDDVTAKIWNMKQDKYVHDLREHSKEIYTIRWSPTGSG-------TNNPNQQLILASASFDSTVKLWDVELGKLLY 424 (502)
Q Consensus 355 gs~dg~i~iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~-------~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~ 424 (502)
+..+..+.+.+ ++++ +-.+. --.|.+.... ....+.. + +.++.||.|.-+|..+|..++
T Consensus 171 g~~~y~v~~~~-~sG~-~W~~~-------~s~~~~~~~~~~~~~~~~~s~Dg~-~-~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 171 GKTIFELGIHS-YDGA-SYNVT-------YSTWQQNVLDVPLALQNTFSKDGM-C-IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp EEEEEECEECC-TTSC-CCCCE-------EEEEECCTTTHHHHTTCSSCSSSC-C-EEEETTTEEEEECSTTCCEEE
T ss_pred ecceEEEEEEC-CCCC-eEEEe-------cccccccccccccccccccccCCc-E-EEECCCCEEEEEECCCCcEEE
Confidence 77777666665 3332 11110 0112221110 0000112 2 347889999999999999887
No 336
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.68 E-value=1.4 Score=38.20 Aligned_cols=99 Identities=14% Similarity=0.068 Sum_probs=55.6
Q ss_pred eeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeee-----c--ccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeE
Q 010759 340 VNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHD-----L--REHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTV 412 (502)
Q Consensus 340 v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~-----~--~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i 412 (502)
..++.|.|+|.+.++ .||.|.-++-.+...-.- . +.-=..+..|.+.|+|. |.... |+.+
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~----------Lyav~-dg~l 156 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY----------LYAVH-GQQF 156 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC----------EEEEE-TTEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCce----------EEEEe-CCcE
Confidence 467889999998887 458887776532211100 0 00114678999999995 44444 7875
Q ss_pred EEEeCCCCe------EEEEee-CCCCCEEEEEECCCCCEEEEEeCCCc
Q 010759 413 KLWDVELGK------LLYSLN-GHREPVYSLAFSPTGEYLASGSLDKS 453 (502)
Q Consensus 413 ~iwd~~~~~------~~~~~~-~h~~~v~~l~~spdg~~lasgs~Dg~ 453 (502)
+-+..-++. ....+. +.-....-+.|.|+|.+.+.. +|.
T Consensus 157 yr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~l~~v~--~g~ 202 (236)
T 1tl2_A 157 YKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGTLFGVQ--GGK 202 (236)
T ss_dssp EEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSCEEEEE--TTE
T ss_pred EecCCCCCCCcccccccceeccCCcceEEEEEECCCCcEEEEe--CCe
Confidence 433222111 011111 222234557799988877665 663
No 337
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=94.33 E-value=2.7 Score=46.83 Aligned_cols=204 Identities=14% Similarity=0.213 Sum_probs=120.9
Q ss_pred EEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECCCcEEE
Q 010759 160 CAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQARI 239 (502)
Q Consensus 160 ~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~dg~i~i 239 (502)
.-.+|..+.||--+ ..++.|+++.+....+... -..+|..-.|-.+..+-+++ +..|..
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnl~~k~klks~~------------------~~e~VvfWkWis~~~l~lVT--~~aVyH 129 (1630)
T 1xi4_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKAHT------------------MTDDVTFWKWISLNTVALVT--DNAVYH 129 (1630)
T ss_pred hccCCCcceEEEec-CCeEEEeehHHhhhhcccc------------------cCCCceEEEecCCCeeEEEc--CCeEEE
Confidence 34677777766654 5789999997654332111 13457777887665544433 357999
Q ss_pred EECCC--ceeEeecCC----CCCEEEEEecCCCCEEEEec-------CCCeEEEEeccCcceeEEeeecccCeEEEecCC
Q 010759 240 WSTNG--DLKCTLSKH----KGPIFSLKWNKKGDYLLTGS-------CDKTAIVWDVKTEEWKQQFEFHSGPTLDVDWRN 306 (502)
Q Consensus 240 w~~~~--~~~~~~~~h----~~~V~~l~~~~~~~~l~sgs-------~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 306 (502)
|+..+ .+...|..| ...|..-+-+++.++++..| -.|.+.+|....+ ..+.+.+|.+....+...+
T Consensus 130 W~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~-~sQ~iegha~~F~~~~~~~ 208 (1630)
T 1xi4_A 130 WSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-VSQPIEGHAASFAQFKMEG 208 (1630)
T ss_pred eccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc-cchhhhHhHhhhheeccCC
Confidence 99865 333345445 34577777788888765322 3477888876543 3445555655443333221
Q ss_pred ----CceEEEE---cCCCeEEEEEcCCC----c-----ceeeecCC---CcceeEEEEcCCCCEEEEEeCCCcEEEEeCC
Q 010759 307 ----NVSFATS---STDNMIYVCKIGEN----R-----PIKTFAGH---QGEVNCVKWDPTGSLLASCSDDVTAKIWNMK 367 (502)
Q Consensus 307 ----~~~~~~~---~~d~~i~~~~~~~~----~-----~~~~~~~h---~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~ 367 (502)
...|..+ ...+.+++.+++.. . .+..+... ..-..++..++....+..-+.-|.|.+||+.
T Consensus 209 ~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~ 288 (1630)
T 1xi4_A 209 NAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE 288 (1630)
T ss_pred CCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc
Confidence 1222222 22368888888643 1 11111111 2233467788888888889999999999999
Q ss_pred CCceeeecccCCCcEEEE
Q 010759 368 QDKYVHDLREHSKEIYTI 385 (502)
Q Consensus 368 ~~~~~~~~~~~~~~i~~~ 385 (502)
++.++..-+-...+|...
T Consensus 289 t~~~i~~~ris~~~iF~~ 306 (1630)
T 1xi4_A 289 TGTCIYMNRISGETIFVT 306 (1630)
T ss_pred cchhhhhccccCCceEEe
Confidence 998876544444444443
No 338
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=94.30 E-value=6.2 Score=41.44 Aligned_cols=266 Identities=9% Similarity=0.074 Sum_probs=146.6
Q ss_pred CCCeEEEEECCCCCEEEEEECCCcEEEEECCCceeEeecC------CCCCEEEEEecCCCCEEEEecCCCeEEEEeccCc
Q 010759 213 SKDVTTLDWNGEGTLLATGSYDGQARIWSTNGDLKCTLSK------HKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTE 286 (502)
Q Consensus 213 ~~~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~~~~~~~~~------h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~ 286 (502)
...|.++....+|.+.+ |+.. -+..++........+.. ....|.++...+++..|..|+. +-+..+|..++
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 34688888888887765 4444 46777765543322211 1234888887777776555554 46888998877
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecC--------CCcceeEEEEcCCCCEEEEEeCC
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAG--------HQGEVNCVKWDPTGSLLASCSDD 358 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~sgs~d 358 (502)
.+..........+.++....+..+..++. +-+.+++...... ..+.. ....|.++....+|.+- .|+..
T Consensus 222 ~~~~~~~l~~~~i~~i~~d~~g~lWigT~-~Gl~~~~~~~~~~-~~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~~ 298 (758)
T 3ott_A 222 QIKQTEAFHNNSIKSLALDGNGDLLAGTD-NGLYVYHNDTTPL-QHIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTDY 298 (758)
T ss_dssp EEEEEEEEEEEEEEEEEECTTCCEEEEET-TEEEEECCTTSCC-EEECCCTTCTTSCSCSCEEEEEECTTCCEE-EEESS
T ss_pred eEEeccCCCCCeEEEEEEcCCCCEEEEeC-CceeEEecCCCcE-EEEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeCC
Confidence 65432222223355554444444444443 4566776654332 22211 12458888888777754 45555
Q ss_pred CcEEEEeCCCCceeeecc-----cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCe--EEEEeeC---
Q 010759 359 VTAKIWNMKQDKYVHDLR-----EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGK--LLYSLNG--- 428 (502)
Q Consensus 359 g~i~iwd~~~~~~~~~~~-----~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~~--- 428 (502)
| +.++.....-...... .....|.++.-..+|. +.+ |+.+| +..++..++. ....+..
T Consensus 299 G-l~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~--------lWi--Gt~~G-l~~~~~~~~~~~~~~~~~~~~~ 366 (758)
T 3ott_A 299 G-ISLSRYNSALQFIPISQITGTGDGNQFYSLFRDSKGF--------YWF--GGANG-LIRFTDPAGERHDAIWYRMGDK 366 (758)
T ss_dssp S-EEEECCCC-CEEEEHHHHSCSCCCCBEEEEEECTTCC--------EEE--EETTE-EEEESCTTSSCCCCEEECTTCS
T ss_pred c-ccccccCCceeEEecccCCCCCCCceEEEEEEcCCCC--------EEE--eeCCc-ceeecccccccceeEEeccCCc
Confidence 6 5444322111111110 1134577877666664 333 44555 5566655431 1111110
Q ss_pred ----CCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe-------cCCCEEEEEECCCCCEEEEEECCCeEEE
Q 010759 429 ----HREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT-------GNGGIFEVCWNKEGDKIAACFANHTVCV 497 (502)
Q Consensus 429 ----h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~-------~~~~i~~~~ws~~g~~la~~~~~~~v~v 497 (502)
....|.++.-.++|.+.+ |+ ++-|..|+..+++...... ....|+++.-.++|+ |-.|+..+.|.+
T Consensus 367 ~~~l~~~~v~~i~~d~~g~lWi-gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~-lWigT~~~Gl~~ 443 (758)
T 3ott_A 367 TYPLSHNRIRHIYEDKEQQLWI-AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQ-LWISTCLGGIFV 443 (758)
T ss_dssp SSCCSCSCEEEEEECTTSCEEE-EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSE-EEEEESSSCEEE
T ss_pred CCCCCCCceEEEEECCCCCEEE-Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCC-EEEEECCCceEE
Confidence 123589999888887655 33 3469999988876543221 123478888888875 445665556777
Q ss_pred EE
Q 010759 498 LD 499 (502)
Q Consensus 498 ~~ 499 (502)
+|
T Consensus 444 ~~ 445 (758)
T 3ott_A 444 VD 445 (758)
T ss_dssp EE
T ss_pred Ec
Confidence 76
No 339
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=93.64 E-value=1.2 Score=41.76 Aligned_cols=39 Identities=15% Similarity=0.101 Sum_probs=18.9
Q ss_pred cEEEEeCCCCe--eEEEEecCCCEEEEEECCCCCEEEEEECC
Q 010759 453 SMHIWSLKEGK--IVKTYTGNGGIFEVCWNKEGDKIAACFAN 492 (502)
Q Consensus 453 ~i~iw~~~~~~--~~~~~~~~~~i~~~~ws~~g~~la~~~~~ 492 (502)
.+.+||+.+.+ .+..+.. ......+...+++.++.|+.+
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~-~r~~~~~~~~~~~i~v~GG~~ 326 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQ-GRAYGVSLPWNNSLLIIGGET 326 (357)
T ss_dssp CCEEEECC---CEEEEECSS-CCBSSEEEEETTEEEEEEEEC
T ss_pred eEEEEecCCCceeeCCCCCC-CcccceeEEeCCEEEEEeeeC
Confidence 57889987654 3332221 111122233467777888754
No 340
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=93.49 E-value=4.3 Score=36.80 Aligned_cols=181 Identities=15% Similarity=0.071 Sum_probs=89.3
Q ss_pred CeEEEEECCCCCEEEEEECCCcEEEEECCC--ceeEeecCCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEe
Q 010759 215 DVTTLDWNGEGTLLATGSYDGQARIWSTNG--DLKCTLSKHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQF 292 (502)
Q Consensus 215 ~V~~l~~s~~~~~l~sg~~dg~i~iw~~~~--~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~ 292 (502)
.|..++-.....+++ . ||.|..|-.+. ++- ....-...|..++..... .+.-. ||.|..|-..........
T Consensus 64 ~i~~ia~G~~hs~~l--~-~G~v~~wG~n~~Gqlg-~P~~~~~~v~~ia~G~~h--s~al~-~G~v~~wG~n~~gqlg~~ 136 (282)
T 3qhy_B 64 GVDAIAAGNYHSLAL--K-DGEVIAWGGNEDGQTT-VPAEARSGVDAIAAGAWA--SYALK-DGKVIAWGDDSDGQTTVP 136 (282)
T ss_dssp CCCEEEECSSEEEEE--E-TTEEEEEECCTTSTTC-CCGGGSSSEEEEEEETTE--EEEEE-TTEEEEEECCTTSTTSCC
T ss_pred CEEEEEeCCCEEEEE--E-CCEEEEeeCCCCCCCC-CCcccCCCeEEEECcCCE--EEEEe-CCeEEEecCCCCCcCCCC
Confidence 466666554433333 4 89999997542 211 111113467777665443 33334 899999965432111111
Q ss_pred eecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCcee
Q 010759 293 EFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYV 372 (502)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~ 372 (502)
......+..+..-....++.. ++.++.|-......+..-..-...|..|+...... ++. .||.+..|-......+
T Consensus 137 ~~~~~~i~~i~~G~~~~~~l~--~G~v~~wG~n~~gqlg~p~~~~~~v~~i~~G~~hs-~al--~~G~v~~wG~n~~gql 211 (282)
T 3qhy_B 137 AEAQSGVTALDGGVYTALAVK--NGGVIAWGDNYFGQTTVPAEAQSGVDDVAGGIFHS-LAL--KDGKVIAWGDNRYKQT 211 (282)
T ss_dssp GGGGSSEEEEEECSSEEEEEE--TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSEE-EEE--ETTEEEEEECCTTSTT
T ss_pred ccCCCCeEEEEcccCEEEEEE--CCEEEEecCCCCCCCCCceecCCCeEEEEecCCEE-EEE--ECCeEEEEECCCCCCC
Confidence 111233444444444444443 68899997654322211111123566776654333 333 5899999976543222
Q ss_pred eecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC
Q 010759 373 HDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVEL 419 (502)
Q Consensus 373 ~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~ 419 (502)
..-......|..|+-.... .++.. ||.|..|-...
T Consensus 212 g~p~~~~~~v~~i~~G~~h----------~~al~--~g~v~~wG~n~ 246 (282)
T 3qhy_B 212 TVPTEALSGVSAIASGEWY----------SLALK--NGKVIAWGSSR 246 (282)
T ss_dssp CCCGGGGSSCCEEEECSSC----------EEEEE--TTEEEEESTTC
T ss_pred CCCcccCCCceEEEcCCCE----------EEEEE--CCEEEEecCCC
Confidence 1111112335555433221 23333 89999996553
No 341
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=93.21 E-value=9.5 Score=39.99 Aligned_cols=312 Identities=11% Similarity=0.090 Sum_probs=164.5
Q ss_pred cceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCCCCEEEEEECC
Q 010759 155 SEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGEGTLLATGSYD 234 (502)
Q Consensus 155 ~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~sg~~d 234 (502)
..|.++...++|.+.+ |+..| |..++..++.. ... ............|.++...+++..|..|..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~-----------~~~-~~~~~~~~~~~~i~~i~~d~~~~~lWigt~- 210 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKF-----------EGI-PLPVHSSQSNLFVNSLLEDTTRQCVWIGTE- 210 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTTEE-----------EEE-CCCCCTTCSSCCEEEEEEETTTTEEEEEEE-
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCce-----------EEe-cCCCccccccceeEEEEEECCCCEEEEEEC-
Confidence 4588888888888665 34444 66677544321 000 000000111234888888777765555553
Q ss_pred CcEEEEECCCceeEeec-CCCCCEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee-------cccCeEEEecCC
Q 010759 235 GQARIWSTNGDLKCTLS-KHKGPIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF-------HSGPTLDVDWRN 306 (502)
Q Consensus 235 g~i~iw~~~~~~~~~~~-~h~~~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~-------~~~~~~~~~~~~ 306 (502)
+-+..++........+. -....|.++...++|...+ |+. +-+.+++..+..+...... ....+.++....
T Consensus 211 ~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gT~-~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~ 288 (758)
T 3ott_A 211 GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLA-GTD-NGLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQ 288 (758)
T ss_dssp EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEE-EET-TEEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECT
T ss_pred CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEE-EeC-CceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcC
Confidence 45777887654332221 1224578888777776554 443 4588888877654322111 112344444333
Q ss_pred CceEEEEcCCCeEEEEEcCCCcceeeec-------CCCcceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCc--eeeecc-
Q 010759 307 NVSFATSSTDNMIYVCKIGENRPIKTFA-------GHQGEVNCVKWDPTGSLLASCSDDVTAKIWNMKQDK--YVHDLR- 376 (502)
Q Consensus 307 ~~~~~~~~~d~~i~~~~~~~~~~~~~~~-------~h~~~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~--~~~~~~- 376 (502)
...+-.+...| +.+.... .....+. .....|.++.-..+|.+-+ |+.+| +..++..++. ....+.
T Consensus 289 ~g~lWiGT~~G-l~~~~~~--~~~~~~~~~~~~~~~~~~~v~~i~~D~~g~lWi-Gt~~G-l~~~~~~~~~~~~~~~~~~ 363 (758)
T 3ott_A 289 EHNIWLGTDYG-ISLSRYN--SALQFIPISQITGTGDGNQFYSLFRDSKGFYWF-GGANG-LIRFTDPAGERHDAIWYRM 363 (758)
T ss_dssp TCCEEEEESSS-EEEECCC--C-CEEEEHHHHSCSCCCCBEEEEEECTTCCEEE-EETTE-EEEESCTTSSCCCCEEECT
T ss_pred CCCEEEEeCCc-ccccccC--CceeEEecccCCCCCCCceEEEEEEcCCCCEEE-eeCCc-ceeecccccccceeEEecc
Confidence 33343343444 3333221 1111111 1124688888888887654 45555 5566654421 111111
Q ss_pred ------cCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCCeEEEEe-eC-----CCCCEEEEEECCCCCE
Q 010759 377 ------EHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELGKLLYSL-NG-----HREPVYSLAFSPTGEY 444 (502)
Q Consensus 377 ------~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~~~~~~~-~~-----h~~~v~~l~~spdg~~ 444 (502)
.....|.++.-.++|. +.+ |+ ++-|..||..+++...-. .. ....|.++...++|.+
T Consensus 364 ~~~~~~l~~~~v~~i~~d~~g~--------lWi--gt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~l 432 (758)
T 3ott_A 364 GDKTYPLSHNRIRHIYEDKEQQ--------LWI--AT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAGQL 432 (758)
T ss_dssp TCSSSCCSCSCEEEEEECTTSC--------EEE--EE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTSEE
T ss_pred CCcCCCCCCCceEEEEECCCCC--------EEE--Ee-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCCCE
Confidence 1123577777666654 344 44 346889998877654321 11 1245889988888765
Q ss_pred EEEEeCCCcEEEEeCCC------CeeE--EEEec-----CCCEEEEEECCCCCEEEEEECCCeEEEEEe
Q 010759 445 LASGSLDKSMHIWSLKE------GKIV--KTYTG-----NGGIFEVCWNKEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 445 lasgs~Dg~i~iw~~~~------~~~~--~~~~~-----~~~i~~~~ws~~g~~la~~~~~~~v~v~~~ 500 (502)
.+ |+..+-|.+++..+ +... ..+.. ...|.++.-.++|+.-++++..+.|..+|.
T Consensus 433 Wi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~ 500 (758)
T 3ott_A 433 WI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNEGNVWVLLYNNKGIDKINP 500 (758)
T ss_dssp EE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTTSCEEEEETTCSSEEEEET
T ss_pred EE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCCCCEEEEccCCCCcEEEeC
Confidence 54 55555588887542 1111 12221 224889999999987664333445777764
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.11 E-value=7 Score=38.19 Aligned_cols=102 Identities=11% Similarity=0.172 Sum_probs=57.3
Q ss_pred CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee--------cccCeEEEecC-----CCceEEEEcC-------
Q 010759 256 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF--------HSGPTLDVDWR-----NNVSFATSST------- 315 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~--------~~~~~~~~~~~-----~~~~~~~~~~------- 315 (502)
..++|+|.|+|..+++-...+.|++++..++........ .....+.+.+. +...+++.+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 457999999998777655445788888655543322211 12234566665 3334444332
Q ss_pred -----CCeEEEEEcCCC-------ccee-eec-CCCcceeEEEEcCCCCEEEEEeC
Q 010759 316 -----DNMIYVCKIGEN-------RPIK-TFA-GHQGEVNCVKWDPTGSLLASCSD 357 (502)
Q Consensus 316 -----d~~i~~~~~~~~-------~~~~-~~~-~h~~~v~~v~~~p~~~~l~sgs~ 357 (502)
...|..++.... +.+. .+. +.......|+|.|||.++++.+.
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 234555554321 1111 122 11234688999999998887654
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=92.34 E-value=5.2 Score=41.62 Aligned_cols=191 Identities=10% Similarity=0.063 Sum_probs=94.0
Q ss_pred CCCCEEEEecCC----CeEEEEeccCcceeEEe-ee-----ccc-CeEEEecC--CCceEEEEcCC------CeEEEEEc
Q 010759 264 KKGDYLLTGSCD----KTAIVWDVKTEEWKQQF-EF-----HSG-PTLDVDWR--NNVSFATSSTD------NMIYVCKI 324 (502)
Q Consensus 264 ~~~~~l~sgs~D----~~v~iwd~~~~~~~~~~-~~-----~~~-~~~~~~~~--~~~~~~~~~~d------~~i~~~~~ 324 (502)
.++..++.|+.+ ..+.+||+.+..|...- .. ... .-.++... ++..++.++.+ +.+++++.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 345566666643 46889999988876643 21 110 01122222 55555655432 24667776
Q ss_pred CCCcc--eeeecCCCcceeEEEEcCCCCEEEEEeCCC--cEEEEeCCCCceeeec-----ccCCCcEEEEEEccCCCCCC
Q 010759 325 GENRP--IKTFAGHQGEVNCVKWDPTGSLLASCSDDV--TAKIWNMKQDKYVHDL-----REHSKEIYTIRWSPTGSGTN 395 (502)
Q Consensus 325 ~~~~~--~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg--~i~iwd~~~~~~~~~~-----~~~~~~i~~~~~sp~g~~~~ 395 (502)
.+..= +..+..... -.+++...++++++.|+.++ .+.+||..+......- ........++.+....
T Consensus 476 ~t~~W~~~~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~---- 550 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVS---- 550 (695)
T ss_dssp TTTEEEECCCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTT----
T ss_pred CCCcEEECCCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCC----
Confidence 55321 111111111 11233324788888888765 6889998876543211 1010111112222220
Q ss_pred CCCCcEEEEEEeC--C-----CeEEEEeCCCCe--------EEEEee-CCCCCEEEEEECCCCCEEEEEeCC--------
Q 010759 396 NPNQQLILASASF--D-----STVKLWDVELGK--------LLYSLN-GHREPVYSLAFSPTGEYLASGSLD-------- 451 (502)
Q Consensus 396 ~~~~~~~l~sgs~--d-----g~i~iwd~~~~~--------~~~~~~-~h~~~v~~l~~spdg~~lasgs~D-------- 451 (502)
+. +++.|+. + +.+.+||+.+.. .+.... ........+.+ .++++++.||.+
T Consensus 551 ---~~-iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 551 ---KQ-GIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRT 625 (695)
T ss_dssp ---TE-EEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTT
T ss_pred ---CE-EEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCC
Confidence 12 3444543 2 458889987765 111211 11111223333 336777777743
Q ss_pred CcEEEEeCCCCee
Q 010759 452 KSMHIWSLKEGKI 464 (502)
Q Consensus 452 g~i~iw~~~~~~~ 464 (502)
..|.+||+.+.+-
T Consensus 626 ~~v~~yd~~t~~W 638 (695)
T 2zwa_A 626 NSIISLDPLSETL 638 (695)
T ss_dssp TSEEEEETTTTEE
T ss_pred CeEEEEECCCCeE
Confidence 4699999987654
No 344
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=91.75 E-value=8.5 Score=35.98 Aligned_cols=112 Identities=13% Similarity=0.049 Sum_probs=61.8
Q ss_pred eccccccceeEEEECCCCCEEEEEeCCCcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCCCeEEEEECCC----
Q 010759 149 ILEGHTSEVCACAWSPAGSLLASGSGDSTARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSKDVTTLDWNGE---- 224 (502)
Q Consensus 149 ~l~~H~~~V~~~~~spd~~~l~sgs~D~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~---- 224 (502)
++-..-..-..|+|.|||.++++--..|.|++++..++.. ..+..+.............|+++|+
T Consensus 26 ~va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~-----------~~v~~~~~v~~~g~~GllGia~~Pdf~~~ 94 (347)
T 3das_A 26 TVATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRK-----------TELGEVPGVSPSGEGGLLGIALSPDYASD 94 (347)
T ss_dssp EEECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCE-----------EEEEECTTCCCBTTBSEEEEEECTTHHHH
T ss_pred EeecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcE-----------eeecccCceeecCCCCceeeEeccccccC
Confidence 3333344568999999999888776689999887543321 1111111111122456889999995
Q ss_pred CCEEEEEE--CCCcEEEEECCC---------ceeE---ee---cCCCCCEEEEEecCCCCEEEEec
Q 010759 225 GTLLATGS--YDGQARIWSTNG---------DLKC---TL---SKHKGPIFSLKWNKKGDYLLTGS 273 (502)
Q Consensus 225 ~~~l~sg~--~dg~i~iw~~~~---------~~~~---~~---~~h~~~V~~l~~~~~~~~l~sgs 273 (502)
+.+.++-+ .++.|.-|.... .... .+ ..|. ...|.|.|+|..+++.+
T Consensus 95 g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~--g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 95 HMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHN--GGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp CEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCC--CCCEEECTTSCEEEECB
T ss_pred CEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCcc--CccccCCCCCCEEEEEC
Confidence 44433322 233444444332 1111 12 1243 25689999998766643
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=90.89 E-value=3.4 Score=38.68 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=13.2
Q ss_pred CeEEEEeccCcceeEE
Q 010759 276 KTAIVWDVKTEEWKQQ 291 (502)
Q Consensus 276 ~~v~iwd~~~~~~~~~ 291 (502)
..+.+||+.+..|...
T Consensus 168 ~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYA 183 (357)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred ccEEEEeCCCCcEEEC
Confidence 5789999999888765
No 346
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=90.48 E-value=10 Score=39.42 Aligned_cols=148 Identities=12% Similarity=0.130 Sum_probs=76.4
Q ss_pred CCCCEEEEEECC----CcEEEEECCCceeEeec-C------C-CCCEEEEEecC-CCCEEEEecCC------CeEEEEec
Q 010759 223 GEGTLLATGSYD----GQARIWSTNGDLKCTLS-K------H-KGPIFSLKWNK-KGDYLLTGSCD------KTAIVWDV 283 (502)
Q Consensus 223 ~~~~~l~sg~~d----g~i~iw~~~~~~~~~~~-~------h-~~~V~~l~~~~-~~~~l~sgs~D------~~v~iwd~ 283 (502)
.++.+++.||.+ ..+.+||.....-..+. . . ...-.+++..+ ++..++.|+.+ ..+.+||+
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456777777754 45777776543222222 1 0 00112223333 56667777654 35789999
Q ss_pred cCcceeEEeeeccc--CeEEEecCCCceEEEEcCCC--eEEEEEcCCCcceee-----ecCCCcceeEEEEcCC-CCEEE
Q 010759 284 KTEEWKQQFEFHSG--PTLDVDWRNNVSFATSSTDN--MIYVCKIGENRPIKT-----FAGHQGEVNCVKWDPT-GSLLA 353 (502)
Q Consensus 284 ~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~--~i~~~~~~~~~~~~~-----~~~h~~~v~~v~~~p~-~~~l~ 353 (502)
.+..|...-..... .-..+.+.++..++.++.++ .+.+|+..+..=... +........++.+... +++++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv 555 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGII 555 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEE
Confidence 98887654221111 11122223555666665433 678888765431110 1111111233555554 67777
Q ss_pred EEeC--C-----CcEEEEeCCCCc
Q 010759 354 SCSD--D-----VTAKIWNMKQDK 370 (502)
Q Consensus 354 sgs~--d-----g~i~iwd~~~~~ 370 (502)
.|+. + ..+.+||+.+..
T Consensus 556 ~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 556 LGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp ECCBCTTSSCBCCEEEEEEECTTC
T ss_pred ECCcCCCCCeeeCcEEEEEccCCc
Confidence 7775 2 358888987765
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=89.78 E-value=16 Score=35.74 Aligned_cols=104 Identities=11% Similarity=0.076 Sum_probs=56.7
Q ss_pred CEEEEEecCCCC-EEEEecCCCeEEEEeccCcc---eeEEee--ec-------ccCeEEEecCCC-----ceEEEEc--C
Q 010759 256 PIFSLKWNKKGD-YLLTGSCDKTAIVWDVKTEE---WKQQFE--FH-------SGPTLDVDWRNN-----VSFATSS--T 315 (502)
Q Consensus 256 ~V~~l~~~~~~~-~l~sgs~D~~v~iwd~~~~~---~~~~~~--~~-------~~~~~~~~~~~~-----~~~~~~~--~ 315 (502)
.-+.|+|.|++. .|+.+...|.|++++..... .+..+. .. ....+.+.+.++ ..+++-+ .
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~ 94 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQ 94 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCC
Confidence 347999999996 56666788999999754321 111110 00 233456666543 3333322 1
Q ss_pred C----------CeEEEEEcCCC----------cceeeec--CCCcceeEEEEcCCCCEEEEEeCCC
Q 010759 316 D----------NMIYVCKIGEN----------RPIKTFA--GHQGEVNCVKWDPTGSLLASCSDDV 359 (502)
Q Consensus 316 d----------~~i~~~~~~~~----------~~~~~~~--~h~~~v~~v~~~p~~~~l~sgs~dg 359 (502)
+ ..|..+.+... +.+..+. ........|.|.|||.++++.++.+
T Consensus 95 ~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 95 ERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 1 14444555321 1222221 1123457899999999888776644
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.45 E-value=0.86 Score=45.25 Aligned_cols=89 Identities=13% Similarity=0.208 Sum_probs=60.4
Q ss_pred EEEEeCCC----Ce-EEEEeeCCCCCEEEEEECCCCCEEEEEe-CCCcEEEEeCCC------Cee-------EEEEecCC
Q 010759 412 VKLWDVEL----GK-LLYSLNGHREPVYSLAFSPTGEYLASGS-LDKSMHIWSLKE------GKI-------VKTYTGNG 472 (502)
Q Consensus 412 i~iwd~~~----~~-~~~~~~~h~~~v~~l~~spdg~~lasgs-~Dg~i~iw~~~~------~~~-------~~~~~~~~ 472 (502)
|.+.|.+. +. .++.+. -......+..+|||+|++.++ .+.+|.++++.+ +++ +......-
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP-~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVP-VPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEE-ESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred eeEEccccccccCCceEEEEe-CCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 66777665 22 222222 223345688999999987765 488999999874 222 22223234
Q ss_pred CEEEEEECCCCCEEEEEECCCeEEEEEee
Q 010759 473 GIFEVCWNKEGDKIAACFANHTVCVLDFR 501 (502)
Q Consensus 473 ~i~~~~ws~~g~~la~~~~~~~v~v~~~~ 501 (502)
+....+|.++|+-..+.+.|..|.-||+.
T Consensus 379 GPlHt~Fd~~G~aYTtlfidSqvvkWni~ 407 (638)
T 3sbq_A 379 GPLHTTFDGRGNAYTTLFIDSQVVKWNME 407 (638)
T ss_dssp CEEEEEECSSSEEEEEETTTTEEEEEEHH
T ss_pred cccEEEECCCCceEeeeeecceEEEEecc
Confidence 67899999999777778899999999974
No 349
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=88.10 E-value=1.5 Score=43.47 Aligned_cols=98 Identities=13% Similarity=0.132 Sum_probs=67.2
Q ss_pred EEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCCCC------e-------EEEEeeCCCCCEEEEEECCCCCEEEEEe
Q 010759 383 YTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVELG------K-------LLYSLNGHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 383 ~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~~------~-------~~~~~~~h~~~v~~l~~spdg~~lasgs 449 (502)
..+..+|+| ++++++|-.+.++.++|++.. + .+.... -...-...+|.++|....|--
T Consensus 326 HGv~vsPDG--------kyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~~G~aYTtlf 396 (638)
T 3sbq_A 326 HGCNTSSDG--------KYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDGRGNAYTTLF 396 (638)
T ss_dssp CCEEECTTS--------CEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECSSSEEEEEET
T ss_pred cceeeCCCC--------CEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECCCCceEeeee
Confidence 344555655 468888888999999998731 1 122333 223457889999995555666
Q ss_pred CCCcEEEEeCCCC----------eeEEEEecCCCEEEEEE------CCCCCEEEEE
Q 010759 450 LDKSMHIWSLKEG----------KIVKTYTGNGGIFEVCW------NKEGDKIAAC 489 (502)
Q Consensus 450 ~Dg~i~iw~~~~~----------~~~~~~~~~~~i~~~~w------s~~g~~la~~ 489 (502)
-|..|.-|++... .+++.+.-+..+-.+.- .|||++|++.
T Consensus 397 idSqvvkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~l 452 (638)
T 3sbq_A 397 IDSQVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVAL 452 (638)
T ss_dssp TTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEE
T ss_pred ecceEEEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEe
Confidence 8999999998753 35566655555655554 7899999877
No 350
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.58 E-value=19 Score=32.84 Aligned_cols=139 Identities=9% Similarity=0.031 Sum_probs=77.6
Q ss_pred EECCCCCEEEEEECC--------------CcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEec----CCCeEEEE
Q 010759 220 DWNGEGTLLATGSYD--------------GQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGS----CDKTAIVW 281 (502)
Q Consensus 220 ~~s~~~~~l~sg~~d--------------g~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs----~D~~v~iw 281 (502)
-++++|.+|+-.... ..|+..++.+.....+... . +..|++++++|+-.. ....|..-
T Consensus 59 ~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~--~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~ 134 (302)
T 3s25_A 59 YINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPD--P--CIYASLIGNYIYYLHYDTQTATSLYRI 134 (302)
T ss_dssp EEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECS--C--EEEEEEETTEEEEEEESSSSCEEEEEE
T ss_pred eEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecC--C--ccEEEEeCCEEEEEeecCCCCceEEEE
Confidence 346777777665443 3566667766544444322 2 235677888877554 34455555
Q ss_pred eccCcceeEEeeecccCeEEEecCCCceEEEEcCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeCCC--
Q 010759 282 DVKTEEWKQQFEFHSGPTLDVDWRNNVSFATSSTDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSDDV-- 359 (502)
Q Consensus 282 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~dg-- 359 (502)
++..... +.+..+.. ..++|.....+.+......|++.++........+.+ ... ..++|++.+|+-....+
T Consensus 135 ~~dGs~~-~~lt~~~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~~---~~~-~~~~P~g~~iy~t~~~~~~ 207 (302)
T 3s25_A 135 RIDGEEK-KKIKNHYL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEALFYDC---NCY-KPVVLDDTNVYYMDVNRDN 207 (302)
T ss_dssp ETTSCCC-EEEESSCC--CCSEEETTEEEEECTTTCCEEEEETTTTEEEEEECS---CEE-EEEEEETTEEEEEEGGGTT
T ss_pred ECCCCCe-EEEeCCCc--eEeeEECCEEEEEeCCCceEEEEECCCCCEEEEeCC---Ccc-ceeeecCCEEEEEEcCCCc
Confidence 6654332 22322222 345666666666666677899998876654444432 222 23568888887665443
Q ss_pred cEEEEeCCCC
Q 010759 360 TAKIWNMKQD 369 (502)
Q Consensus 360 ~i~iwd~~~~ 369 (502)
.|..-++...
T Consensus 208 ~I~~~~ldG~ 217 (302)
T 3s25_A 208 AIVHVNINNP 217 (302)
T ss_dssp EEEEECSSSC
T ss_pred EEEEEECCCC
Confidence 4444444433
No 351
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=86.53 E-value=19 Score=32.83 Aligned_cols=235 Identities=7% Similarity=-0.006 Sum_probs=117.2
Q ss_pred CCCCEEEEEE--CCCcEEEEECCCceeEeecCCCCCEEEEEecCCCCEEEEecCC--------------CeEEEEeccCc
Q 010759 223 GEGTLLATGS--YDGQARIWSTNGDLKCTLSKHKGPIFSLKWNKKGDYLLTGSCD--------------KTAIVWDVKTE 286 (502)
Q Consensus 223 ~~~~~l~sg~--~dg~i~iw~~~~~~~~~~~~h~~~V~~l~~~~~~~~l~sgs~D--------------~~v~iwd~~~~ 286 (502)
.+|.+++-.. .++.|...+.++.....+... .+--+++++++|+-+... ..|+..++...
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~~~~l~~~----~~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~ 98 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSNIHKLSND----TAMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGH 98 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCSCEEEEEE----EEEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSC
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCCCEEccCC----ceeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCC
Confidence 3455555443 245555556665444444322 123457888887655432 35777777666
Q ss_pred ceeEEeeecccCeEEEecCCCceEEEE---cCCCeEEEEEcCCCcceeeecCCCcceeEEEEcCCCCEEEEEeC-CCcEE
Q 010759 287 EWKQQFEFHSGPTLDVDWRNNVSFATS---STDNMIYVCKIGENRPIKTFAGHQGEVNCVKWDPTGSLLASCSD-DVTAK 362 (502)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~d~~i~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~sgs~-dg~i~ 362 (502)
+..... ..+...+....+..+.+. .....|+..++...... .+..+.. .+++|+++.|+-.+. ...|.
T Consensus 99 ~~~~l~---~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~~-~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy 170 (302)
T 3s25_A 99 GSTVLD---PDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDGEEKK-KIKNHYL----FTCNTSDRYFYYNNPKNGQLY 170 (302)
T ss_dssp CCEEEE---CSCEEEEEEETTEEEEEEESSSSCEEEEEEETTSCCCE-EEESSCC----CCSEEETTEEEEECTTTCCEE
T ss_pred cceEee---cCCccEEEEeCCEEEEEeecCCCCceEEEEECCCCCeE-EEeCCCc----eEeeEECCEEEEEeCCCceEE
Confidence 532221 222233444444444444 34567777777654433 3333322 346778888776655 56777
Q ss_pred EEeCCCCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCC-CeEEEEeCCCCeEEEEeeCCCCCEEEEEECCC
Q 010759 363 IWNMKQDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFD-STVKLWDVELGKLLYSLNGHREPVYSLAFSPT 441 (502)
Q Consensus 363 iwd~~~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~d-g~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd 441 (502)
.-++..+.....+. .... ..+.|++. .+..+-..+ ..|..-++.... ...+.. ..+ ..|+|+
T Consensus 171 ~~~l~g~~~~~l~~---~~~~-~~~~P~g~--------~iy~t~~~~~~~I~~~~ldG~~-~~~Lt~--~~~--~~~~~~ 233 (302)
T 3s25_A 171 RYDTASQSEALFYD---CNCY-KPVVLDDT--------NVYYMDVNRDNAIVHVNINNPN-PVVLTE--ANI--EHYNVY 233 (302)
T ss_dssp EEETTTTEEEEEEC---SCEE-EEEEEETT--------EEEEEEGGGTTEEEEECSSSCC-CEECSC--SCE--EEEEEE
T ss_pred EEECCCCCEEEEeC---CCcc-ceeeecCC--------EEEEEEcCCCcEEEEEECCCCC-eEEEeC--CCc--ceEEEC
Confidence 77776554322222 2222 23447664 222232222 356555665333 233332 233 347888
Q ss_pred CCEEEEEeC--CCcEEEEeCCCCeeEEEEecCCCEEEEEECCCCCEEEEEE
Q 010759 442 GEYLASGSL--DKSMHIWSLKEGKIVKTYTGNGGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 442 g~~lasgs~--Dg~i~iw~~~~~~~~~~~~~~~~i~~~~ws~~g~~la~~~ 490 (502)
+.+|.-++. .+.|..-++..........+ .+. .+++-+++|....
T Consensus 234 g~~Iy~~~~~~~~~i~~~~~DG~~r~~l~~~--~~~--~i~i~~d~Iy~td 280 (302)
T 3s25_A 234 GSLIFYQRGGDNPALCVVKNDGTGFKELAKG--EFC--NINVTSQYVYFTD 280 (302)
T ss_dssp TTEEEEEECSSSCEEEEEETTSCCCEEEEES--CEE--EEEECSSEEEEEE
T ss_pred CCEEEEEECCCCcEEEEEECCCCccEEeeCC--ccc--eEEEeCCEEEEEE
Confidence 888876533 34555555543332222222 222 3455666666554
No 352
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=75.37 E-value=14 Score=39.85 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=33.2
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.|.+++..++..++++-+.|+++|||++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677888889999999999999999999999988775
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=72.98 E-value=92 Score=32.25 Aligned_cols=225 Identities=14% Similarity=0.100 Sum_probs=114.2
Q ss_pred ecCCCCEEEE----ecCC-CeEEEEeccCcceeE-EeeecccC--------eEEEecCCCceEEEEc-----------CC
Q 010759 262 WNKKGDYLLT----GSCD-KTAIVWDVKTEEWKQ-QFEFHSGP--------TLDVDWRNNVSFATSS-----------TD 316 (502)
Q Consensus 262 ~~~~~~~l~s----gs~D-~~v~iwd~~~~~~~~-~~~~~~~~--------~~~~~~~~~~~~~~~~-----------~d 316 (502)
++|++++++. |++| ..++++|+.+++.+. .|. .... ...+.|.++..+..+. ..
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~~~~ 215 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSSLYP 215 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTTSSB
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cccccccccccccceeeEECCCEEEEEeCCCCCCcCcCCCC
Confidence 7888887553 2333 469999999988663 122 1100 0223565433333321 13
Q ss_pred CeEEEEEcCCCc--ceeeecCCCcce-eEEEEcCCCC-----EEEEEeCC---CcEEEEeCCC--CceeeecccCCCcEE
Q 010759 317 NMIYVCKIGENR--PIKTFAGHQGEV-NCVKWDPTGS-----LLASCSDD---VTAKIWNMKQ--DKYVHDLREHSKEIY 383 (502)
Q Consensus 317 ~~i~~~~~~~~~--~~~~~~~h~~~v-~~v~~~p~~~-----~l~sgs~d---g~i~iwd~~~--~~~~~~~~~~~~~i~ 383 (502)
..++.|.+++.. ....|.+....+ ..+..+++++ .+++.+.+ ..+.+.+... +.. ..+......
T Consensus 216 ~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~~-- 292 (711)
T 4hvt_A 216 NSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLKL-QKINMPSDA-- 292 (711)
T ss_dssp CEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCEE-EECCSCTTC--
T ss_pred CEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCcc-eEeecCCcc--
Confidence 568889888753 334555544333 3455566766 35554423 2344445432 221 222111111
Q ss_pred EEEEccCCCCCCCCCCcEEEEEE---------eCCCeEEEEeCCCCe-------EEEE-ee-CCCCCEEEEEECCCCCEE
Q 010759 384 TIRWSPTGSGTNNPNQQLILASA---------SFDSTVKLWDVELGK-------LLYS-LN-GHREPVYSLAFSPTGEYL 445 (502)
Q Consensus 384 ~~~~sp~g~~~~~~~~~~~l~sg---------s~dg~i~iwd~~~~~-------~~~~-~~-~h~~~v~~l~~spdg~~l 445 (502)
.+...+.+. +++.+. ...+.|...++.++. .... +. .....+..+.|..+ .++
T Consensus 293 ~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~ 363 (711)
T 4hvt_A 293 TLQGSFKEY--------VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVF 363 (711)
T ss_dssp EEEEEETTE--------EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEE
T ss_pred eEeeeECCE--------EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEE
Confidence 112223332 233221 246678888876531 1122 22 12346788899876 567
Q ss_pred EEEeCCCc--EEEEeCCCCe-eEEE---EecCCCEEEEEECCCCCEEEEEEC----CCeEEEEE
Q 010759 446 ASGSLDKS--MHIWSLKEGK-IVKT---YTGNGGIFEVCWNKEGDKIAACFA----NHTVCVLD 499 (502)
Q Consensus 446 asgs~Dg~--i~iw~~~~~~-~~~~---~~~~~~i~~~~ws~~g~~la~~~~----~~~v~v~~ 499 (502)
++...++. |.++++.+++ .+.. ++..+.+..++.+++++.++.... -..+..+|
T Consensus 364 ~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d 427 (711)
T 4hvt_A 364 LATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIENSIVPPTIYLWV 427 (711)
T ss_dssp EEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEECSSSCCEEEEEC
T ss_pred EEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEecCCCCCEEEEEe
Confidence 77777764 6777776664 2222 233455777778888765544332 24555554
No 354
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=68.97 E-value=77 Score=29.72 Aligned_cols=50 Identities=10% Similarity=0.048 Sum_probs=25.2
Q ss_pred CEEEEEECCCcEEEEECCC--ceeEee--cCCCCCEEEEEecC-CCCEEEEecCCC
Q 010759 226 TLLATGSYDGQARIWSTNG--DLKCTL--SKHKGPIFSLKWNK-KGDYLLTGSCDK 276 (502)
Q Consensus 226 ~~l~sg~~dg~i~iw~~~~--~~~~~~--~~h~~~V~~l~~~~-~~~~l~sgs~D~ 276 (502)
..|..|...| +.+++... ..-..+ ......|.+|.+.| +...|+.+...+
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g 77 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTG 77 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC-
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCC
Confidence 3566677766 44444321 211111 12235689999998 233455554444
No 355
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=65.89 E-value=26 Score=35.37 Aligned_cols=58 Identities=14% Similarity=0.168 Sum_probs=40.7
Q ss_pred CEEEEEECCCCCEEEEEeCC------------CcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEE
Q 010759 432 PVYSLAFSPTGEYLASGSLD------------KSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAAC 489 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~D------------g~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~ 489 (502)
..-.|+|+|.|.+++.-..+ ..+.+.+..++++.+.+.+. ..+..++|+||++.|.+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 34679999999866653221 24566677778876665543 458999999999987665
No 356
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=64.91 E-value=28 Score=34.85 Aligned_cols=60 Identities=12% Similarity=0.187 Sum_probs=42.8
Q ss_pred CCEEEEEECCCCCEEE-EEeC-----------CCcEEEEeCCCCeeEEEEecC--CCEEEEEECCCCCEEEEEE
Q 010759 431 EPVYSLAFSPTGEYLA-SGSL-----------DKSMHIWSLKEGKIVKTYTGN--GGIFEVCWNKEGDKIAACF 490 (502)
Q Consensus 431 ~~v~~l~~spdg~~la-sgs~-----------Dg~i~iw~~~~~~~~~~~~~~--~~i~~~~ws~~g~~la~~~ 490 (502)
.....|+|.++|.+.+ +=+. ...|..++..+|++...+... ..++.++|+||++.|.++-
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEEE
Confidence 3468899999998776 3211 125777777788876665542 4589999999999887664
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=56.32 E-value=14 Score=39.92 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=32.4
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
.+.+++..++..++++-+.|+++|+|++.+++++.+.
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 273 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeee
Confidence 5677888888899999999999999999999887653
No 358
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=54.47 E-value=1.6e+02 Score=28.54 Aligned_cols=51 Identities=16% Similarity=0.287 Sum_probs=34.3
Q ss_pred CeEEEEECCCCC-EEEEEECCCcEEEEECCCce----eEeec---------CCCCCEEEEEecCC
Q 010759 215 DVTTLDWNGEGT-LLATGSYDGQARIWSTNGDL----KCTLS---------KHKGPIFSLKWNKK 265 (502)
Q Consensus 215 ~V~~l~~s~~~~-~l~sg~~dg~i~iw~~~~~~----~~~~~---------~h~~~V~~l~~~~~ 265 (502)
.-..|+|.|+|. .|+.+...|.|++++..+.. ...+. ........|+|+|+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~ 79 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPN 79 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTT
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCC
Confidence 357899999996 45566788999999765431 11111 11356789999996
No 359
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=54.15 E-value=22 Score=36.68 Aligned_cols=37 Identities=19% Similarity=0.397 Sum_probs=30.5
Q ss_pred CCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEEe
Q 010759 431 EPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTYT 469 (502)
Q Consensus 431 ~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~~ 469 (502)
..|.++.+ +..+|++-+.|.++|+|++.+++++.+..
T Consensus 222 ~~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 222 SVISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYD 258 (729)
T ss_dssp CEEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeec
Confidence 34666665 36799999999999999999999887764
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=51.48 E-value=11 Score=41.68 Aligned_cols=37 Identities=27% Similarity=0.317 Sum_probs=31.9
Q ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEeCCCCeeEEEE
Q 010759 432 PVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKIVKTY 468 (502)
Q Consensus 432 ~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~~~~~ 468 (502)
.|.+++..++..+|++-+.|+++|||++.+++++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 3455667788899999999999999999999988875
No 361
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=45.24 E-value=16 Score=40.45 Aligned_cols=37 Identities=16% Similarity=0.213 Sum_probs=31.2
Q ss_pred ceeEEEEcCCCCEEEEEeCCCcEEEEeCCCCceeeec
Q 010759 339 EVNCVKWDPTGSLLASCSDDVTAKIWNMKQDKYVHDL 375 (502)
Q Consensus 339 ~v~~v~~~p~~~~l~sgs~dg~i~iwd~~~~~~~~~~ 375 (502)
.+.+++..++..++++-+.|+++|||++.++.++.+.
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETI 275 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEee
Confidence 4556667788899999999999999999999887653
No 362
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=44.97 E-value=1.9e+02 Score=26.80 Aligned_cols=76 Identities=11% Similarity=0.092 Sum_probs=39.1
Q ss_pred CCCeEEEEECC--CCCEEEEEECCC----cEEEEECCCceeEeec------C--------CCCCEEEEEecCC--CCEEE
Q 010759 213 SKDVTTLDWNG--EGTLLATGSYDG----QARIWSTNGDLKCTLS------K--------HKGPIFSLKWNKK--GDYLL 270 (502)
Q Consensus 213 ~~~V~~l~~s~--~~~~l~sg~~dg----~i~iw~~~~~~~~~~~------~--------h~~~V~~l~~~~~--~~~l~ 270 (502)
...|.+|++.| .+.+++. +..| .|...+-.+..-..+. . +...|.+|++.|. ...|+
T Consensus 54 ~~~v~~i~~dp~~~~~l~~g-~~~g~~g~gl~~s~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~ 132 (394)
T 3b7f_A 54 GHTIHHIVQDPREPERMLMA-ARTGHLGPTVFRSDDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWY 132 (394)
T ss_dssp TSEEEEEEECSSSTTCEEEE-EEC--CCEEEEEESSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEE
T ss_pred CCceEEEEECCCCCCeEEEE-ecCCCCCccEEEeCCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEE
Confidence 34699999998 5555544 4344 3433322222111111 1 1125788999873 45666
Q ss_pred EecCCCeEEEEeccCccee
Q 010759 271 TGSCDKTAIVWDVKTEEWK 289 (502)
Q Consensus 271 sgs~D~~v~iwd~~~~~~~ 289 (502)
.+...+.|...+-....+.
T Consensus 133 ~g~~~ggl~~S~DgG~tW~ 151 (394)
T 3b7f_A 133 AGTSPQGLFRSTDHGASWE 151 (394)
T ss_dssp EEEETTEEEEESSTTSBCE
T ss_pred EEecCCcEEEEcCCCCCeE
Confidence 6666666666643333343
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=39.71 E-value=2.4e+02 Score=26.41 Aligned_cols=162 Identities=10% Similarity=0.159 Sum_probs=86.9
Q ss_pred eEEEEeccCc--ceeEEeeecccC------eEE--Eec-C------CCceEEEEcCCCeEEEEEcCCCcceeeec-----
Q 010759 277 TAIVWDVKTE--EWKQQFEFHSGP------TLD--VDW-R------NNVSFATSSTDNMIYVCKIGENRPIKTFA----- 334 (502)
Q Consensus 277 ~v~iwd~~~~--~~~~~~~~~~~~------~~~--~~~-~------~~~~~~~~~~d~~i~~~~~~~~~~~~~~~----- 334 (502)
.|.+||+.+. +.++.+.+.... ..+ ++. . ....+++-+....|.|+++.+++.-+.+.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6778888888 888777654221 222 231 1 22345666677889999988765443321
Q ss_pred ---------CC----CcceeEEEEcCC----CCEEEEEeCCCcEEEEeCCC-----Cce---eeec--ccCCCcEEEEEE
Q 010759 335 ---------GH----QGEVNCVKWDPT----GSLLASCSDDVTAKIWNMKQ-----DKY---VHDL--REHSKEIYTIRW 387 (502)
Q Consensus 335 ---------~h----~~~v~~v~~~p~----~~~l~sgs~dg~i~iwd~~~-----~~~---~~~~--~~~~~~i~~~~~ 387 (502)
|. ...+..++++|+ ++.|.-+...+. ++|.+.+ ... +..+ ++........+.
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~ 282 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAY 282 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEE
Confidence 11 135778888887 666665555442 3444322 111 1111 000112223334
Q ss_pred c-cCCCCCCCCCCcEEEEEEeCCCeEEEEeCCC-C------eEEEEeeCCCCCEEEEEECCCCCEEEEEe
Q 010759 388 S-PTGSGTNNPNQQLILASASFDSTVKLWDVEL-G------KLLYSLNGHREPVYSLAFSPTGEYLASGS 449 (502)
Q Consensus 388 s-p~g~~~~~~~~~~~l~sgs~dg~i~iwd~~~-~------~~~~~~~~h~~~v~~l~~spdg~~lasgs 449 (502)
. .+| .++++--..+.|..|+... . ..+.. ...-..+..+++.++|.+.+..+
T Consensus 283 D~~~G---------~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~-d~~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 283 DPKTK---------VIFFAEANTKQVSCWNTQKMPLRMKNTDVVYT-SSRFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp CTTTC---------EEEEEESSSSEEEEEETTSCSBCGGGEEEEEE-CTTCCSEEEEEECTTSCEEEEEC
T ss_pred eCCCC---------eEEEEeccCCeEEEEeCCCCccccCceEEEEE-CCCccccCeEEECCCCeEEEEEC
Confidence 3 233 3555666778899999875 1 12222 22334578888877776656554
No 364
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=39.09 E-value=45 Score=34.35 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=29.7
Q ss_pred CEEEEEecCCCCEEEEecCCCeEEEEeccCcceeEEeee
Q 010759 256 PIFSLKWNKKGDYLLTGSCDKTAIVWDVKTEEWKQQFEF 294 (502)
Q Consensus 256 ~V~~l~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~ 294 (502)
.|.++.+ +..++++-+.|+++|+|++.++.++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 3555554 367999999999999999999988877655
No 365
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=37.00 E-value=3.7e+02 Score=27.70 Aligned_cols=237 Identities=14% Similarity=0.141 Sum_probs=112.5
Q ss_pred eeEEE-ECCCCCEEEEE----eCC-CcEEEEecCCCCCCCCCCCCCceEEEEEeeecccccCCC-----CeEEEEECCCC
Q 010759 157 VCACA-WSPAGSLLASG----SGD-STARIWTIADGTSNGGAQNGPLNVLVLKHVKGRTNEKSK-----DVTTLDWNGEG 225 (502)
Q Consensus 157 V~~~~-~spd~~~l~sg----s~D-~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~V~~l~~s~~~ 225 (502)
...+. ++|+++++|-+ |.| .+++++|+.+++.....-. +. .+.+ ....++|-.+.
T Consensus 131 ~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~-~~-------------~k~~~~~~~~~~~~~W~d~~ 196 (711)
T 4hvt_A 131 YRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFE-PI-------------TNSGKLLEGKFTYPTWINKD 196 (711)
T ss_dssp EEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSC-CB-------------CTTCCBCCEETCCEEEEETT
T ss_pred EeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcc-cc-------------cccccccccccceeeEECCC
Confidence 34455 89999876542 223 4799999988754321100 00 0000 01223555333
Q ss_pred CEEEEE----------ECCCcEEEEECCCc---eeEeecCCCCCE-EEEEecCCCC-----EEEEecCC---CeEEEEec
Q 010759 226 TLLATG----------SYDGQARIWSTNGD---LKCTLSKHKGPI-FSLKWNKKGD-----YLLTGSCD---KTAIVWDV 283 (502)
Q Consensus 226 ~~l~sg----------~~dg~i~iw~~~~~---~~~~~~~h~~~V-~~l~~~~~~~-----~l~sgs~D---~~v~iwd~ 283 (502)
.++++. ++...|+.|..... -...+.+....+ .+...++++. .+++.+.+ ..+.+.++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 276 (711)
T 4hvt_A 197 TIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDT 276 (711)
T ss_dssp EEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEEC
T ss_pred EEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcC
Confidence 333332 22357888987543 223444433333 2344455655 24444322 33455555
Q ss_pred cC--cceeEEeeecccCeEEEecCCCceEEEE----------cCCCeEEEEEcCCCc-------ceee-ecC-CCcceeE
Q 010759 284 KT--EEWKQQFEFHSGPTLDVDWRNNVSFATS----------STDNMIYVCKIGENR-------PIKT-FAG-HQGEVNC 342 (502)
Q Consensus 284 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~d~~i~~~~~~~~~-------~~~~-~~~-h~~~v~~ 342 (502)
.. +++... ........ +....+..++.. ...+.|..+++.... .... +.. ....+..
T Consensus 277 ~~~~~~~~~l-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 354 (711)
T 4hvt_A 277 KYKNLKLQKI-NMPSDATL-QGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNF 354 (711)
T ss_dssp SSSSCEEEEC-CSCTTCEE-EEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEE
T ss_pred CCCCCcceEe-ecCCcceE-eeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEE
Confidence 42 332222 11111111 122233333321 245678888876531 1222 322 2346778
Q ss_pred EEEcCCCCEEEEEeCCCc--EEEEeCCCCc-eeee-cccC-CCcEEEEEEccCCCCCCCCCCcEEEEEEe---CCCeEEE
Q 010759 343 VKWDPTGSLLASCSDDVT--AKIWNMKQDK-YVHD-LREH-SKEIYTIRWSPTGSGTNNPNQQLILASAS---FDSTVKL 414 (502)
Q Consensus 343 v~~~p~~~~l~sgs~dg~--i~iwd~~~~~-~~~~-~~~~-~~~i~~~~~sp~g~~~~~~~~~~~l~sgs---~dg~i~i 414 (502)
+.|..+ .++++...++. +.++++.++. .+.. +... .+.+..+..++++. .++++.+ .-+.+..
T Consensus 355 ~~~~~~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~--------~~~~~~ss~~~P~~~~~ 425 (711)
T 4hvt_A 355 ISTTKD-RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEE--------EALITIENSIVPPTIYL 425 (711)
T ss_dssp EEECSS-CEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCS--------CEEEEEECSSSCCEEEE
T ss_pred EEEECC-EEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCC--------EEEEEEecCCCCCEEEE
Confidence 888865 67778877875 5666665553 1222 2211 23455555555443 2344433 2356777
Q ss_pred EeCC
Q 010759 415 WDVE 418 (502)
Q Consensus 415 wd~~ 418 (502)
+|+.
T Consensus 426 ~d~~ 429 (711)
T 4hvt_A 426 WVKT 429 (711)
T ss_dssp ECTT
T ss_pred EeCC
Confidence 8876
No 366
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=35.05 E-value=1.7e+02 Score=29.45 Aligned_cols=38 Identities=24% Similarity=0.249 Sum_probs=26.7
Q ss_pred eEEEEeCCCCeEEEEeeCCC-CCEEEEEECCCCCEEEEE
Q 010759 411 TVKLWDVELGKLLYSLNGHR-EPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 411 ~i~iwd~~~~~~~~~~~~h~-~~v~~l~~spdg~~lasg 448 (502)
.+.+.+..+++...-+.+.. ..++.++|+||++.|...
T Consensus 510 ~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 510 QMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred eEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCEEEEE
Confidence 35556666777665555543 569999999999877654
No 367
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=34.03 E-value=1.7e+02 Score=29.22 Aligned_cols=60 Identities=18% Similarity=0.222 Sum_probs=38.3
Q ss_pred cEEEEEEccCCCCCCCCCCcEEEEEEeC-----------CCeEEEEeCCCCeEEEEeeCC-CCCEEEEEECCCCCEEEEE
Q 010759 381 EIYTIRWSPTGSGTNNPNQQLILASASF-----------DSTVKLWDVELGKLLYSLNGH-REPVYSLAFSPTGEYLASG 448 (502)
Q Consensus 381 ~i~~~~~sp~g~~~~~~~~~~~l~sgs~-----------dg~i~iwd~~~~~~~~~~~~h-~~~v~~l~~spdg~~lasg 448 (502)
....|.|.++|. +++++=.. .+.|..++..+++....+.+. ...++.++||||++.|..+
T Consensus 477 sPDnL~fd~~G~--------LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGR--------LWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCC--------EEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCC--------EEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCEEEEE
Confidence 345677877775 34434211 225666777777765555543 3468999999999887654
No 368
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=28.69 E-value=3.3e+02 Score=24.68 Aligned_cols=144 Identities=8% Similarity=0.106 Sum_probs=0.0
Q ss_pred CCCCEEEEEeCCCcEEEEeCC----CCceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeC-----
Q 010759 347 PTGSLLASCSDDVTAKIWNMK----QDKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDV----- 417 (502)
Q Consensus 347 p~~~~l~sgs~dg~i~iwd~~----~~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~----- 417 (502)
|+...+++.+.+|.|+--.+. .+.....++.....+..+..+... .|+..+..|.+.-+..
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~~~~~~~lke~D~l~~~~~~~t~d----------~ll~fT~~Gr~~~~~~~elp~ 72 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAASNGQDFAMKDTDRLLAMLEMNTKD----------VLLLFTNKGNYLYCPVHELPD 72 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHTTTCCCCCCTTCCEEEEEEEETTS----------EEEEEETTSEEEEEEGGGSCB
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhcCccccccCCCCEEEEEEEECCCC----------EEEEEECCCEEEEEEHHHCcC
Q ss_pred ----CCCe---EEEEeeCCCCCEEEEEECC--CCCEEEEEeCCCcEEEEeC--------CCCeeEEEEecCCCEEEEEEC
Q 010759 418 ----ELGK---LLYSLNGHREPVYSLAFSP--TGEYLASGSLDKSMHIWSL--------KEGKIVKTYTGNGGIFEVCWN 480 (502)
Q Consensus 418 ----~~~~---~~~~~~~h~~~v~~l~~sp--dg~~lasgs~Dg~i~iw~~--------~~~~~~~~~~~~~~i~~~~ws 480 (502)
..|. ....+..-...+..+...+ ++.+|+.++..|.++-..+ ..|...-.+.....+..+...
T Consensus 73 ~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~d~lv~~~~~ 152 (323)
T 1wp5_A 73 IRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKNDDQVVDVHLT 152 (323)
T ss_dssp CCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTTCCEEEEEEE
T ss_pred CCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCCCEEEEEEEe
Q ss_pred CCCCEEEEEECCCeEEEEEe
Q 010759 481 KEGDKIAACFANHTVCVLDF 500 (502)
Q Consensus 481 ~~g~~la~~~~~~~v~v~~~ 500 (502)
...+.|+..+.+|.+..+.+
T Consensus 153 ~~~~~i~l~T~~G~~irf~~ 172 (323)
T 1wp5_A 153 DGMNELFLVTHNGYALWFDE 172 (323)
T ss_dssp CSCSEEEEEETTSEEEEEEG
T ss_pred CCCCEEEEEeCCCcEEEEEH
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=25.54 E-value=3.8e+02 Score=24.33 Aligned_cols=141 Identities=15% Similarity=0.125 Sum_probs=79.6
Q ss_pred CCCEEEEEeCCCcEEEEeCCC-------CceeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC--
Q 010759 348 TGSLLASCSDDVTAKIWNMKQ-------DKYVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE-- 418 (502)
Q Consensus 348 ~~~~l~sgs~dg~i~iwd~~~-------~~~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~-- 418 (502)
+..+++..+.+|.++--.+.. +.....++.. ..+..+....... .|+..+..|.+..+...
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~-D~lv~~~~~~~~d---------~ill~T~~G~~~rf~~~~~ 177 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDN-DELVGAVLCSAGD---------DLLLVSANGQSIRFSATDE 177 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTT-CCEEEEEEECTTC---------EEEEEETTSEEEEEECCTT
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCC-CEEEEEEEecCCC---------EEEEEECCCeEEEEECccc
Confidence 578899999999999876543 1122233332 3333333322211 34456678888777655
Q ss_pred C---------CeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCCee-------EEEEe--c-CCCEEEEEE
Q 010759 419 L---------GKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEGKI-------VKTYT--G-NGGIFEVCW 479 (502)
Q Consensus 419 ~---------~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~~~-------~~~~~--~-~~~i~~~~w 479 (502)
. |.....+. -...|.++..-+.+.+|+.++..|.++.-.+..... +..+. . .+.+..+..
T Consensus 178 eip~~gr~a~Gv~~i~L~-~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~ 256 (327)
T 3uc1_A 178 ALRPMGRATSGVQGMRFN-IDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALI 256 (327)
T ss_dssp TSCCCCTTSBCEESSCCC-TTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEE
T ss_pred ccCcCCcCCCCeeeecCC-CCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEE
Confidence 2 12222232 234566666666677899999999999887643221 22221 1 334555444
Q ss_pred CCCCCEEEEEECCCeEEEEE
Q 010759 480 NKEGDKIAACFANHTVCVLD 499 (502)
Q Consensus 480 s~~g~~la~~~~~~~v~v~~ 499 (502)
..+...++..+.+|.+..+.
T Consensus 257 ~~~~~~i~l~T~~G~~ir~~ 276 (327)
T 3uc1_A 257 VDDDSELYAVTSGGGVIRTA 276 (327)
T ss_dssp ECTTCEEEEEEGGGCEEEEE
T ss_pred eCCCccEEEEcCCCeEEEEe
Confidence 34455677777777765554
No 370
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=23.37 E-value=3.8e+02 Score=23.57 Aligned_cols=139 Identities=15% Similarity=0.036 Sum_probs=77.2
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCc------eeeecccCCCcEEEEEEccCCCCCCCCCCcEEEEEEeCCCeEEEEeCC---
Q 010759 348 TGSLLASCSDDVTAKIWNMKQDK------YVHDLREHSKEIYTIRWSPTGSGTNNPNQQLILASASFDSTVKLWDVE--- 418 (502)
Q Consensus 348 ~~~~l~sgs~dg~i~iwd~~~~~------~~~~~~~~~~~i~~~~~sp~g~~~~~~~~~~~l~sgs~dg~i~iwd~~--- 418 (502)
+..+++..+.+|.++-..+..-. ....++.. ..+..+...... + .++..+..|.+..+...
T Consensus 79 ~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkeg-D~l~~~~~~~~~-------~--~ill~T~~G~~~r~~~~eip 148 (276)
T 3no0_A 79 FGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEG-DEVVSIASSVDE-------T--HILLFTKKGRVARFSVREVP 148 (276)
T ss_dssp SCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTT-CCEEEEEECCSS-------C--EEEEEETTSEEEEEEGGGSC
T ss_pred CCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCC-CEEEEEEEeCCC-------C--EEEEEECCCEEEEEEhhhCC
Confidence 46788899999999988754321 11223222 334443332211 1 34556778888777642
Q ss_pred ------CCeEEEEeeCCCCCEEEEEECCCCCEEEEEeCCCcEEEEeCCCC-------eeEEEEecCCCEEEEEECCCCCE
Q 010759 419 ------LGKLLYSLNGHREPVYSLAFSPTGEYLASGSLDKSMHIWSLKEG-------KIVKTYTGNGGIFEVCWNKEGDK 485 (502)
Q Consensus 419 ------~~~~~~~~~~h~~~v~~l~~spdg~~lasgs~Dg~i~iw~~~~~-------~~~~~~~~~~~i~~~~ws~~g~~ 485 (502)
.|.....+.. ...|.++...+++.+|+..+..|.++...+... +-+..+...+.+..+..-.+...
T Consensus 149 ~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i~~~~~lv~~~~~~~~~~ 227 (276)
T 3no0_A 149 PSTPGARGVQGIKLEK-NDETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVSGTKDTLVDLIPIKEEVE 227 (276)
T ss_dssp BCCTTCCCEECCCCCT-TCCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECCCSSSCEEEEEEESSEEE
T ss_pred CcCCCCCCEEEEccCC-CCEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEEcCCCcEEEEEEeCCCCE
Confidence 1222223332 244555554456678999999999999886432 22222322334444333234456
Q ss_pred EEEEECCCeEEE
Q 010759 486 IAACFANHTVCV 497 (502)
Q Consensus 486 la~~~~~~~v~v 497 (502)
++..+.+|.+..
T Consensus 228 i~~~t~~G~~ir 239 (276)
T 3no0_A 228 LLITTKNGKAFY 239 (276)
T ss_dssp EEEEETTSCEEE
T ss_pred EEEEcCCCeEEE
Confidence 777777777766
Done!