Query 010765
Match_columns 502
No_of_seqs 393 out of 3033
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:46:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010765.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010765hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ihg_A RDME; flavoenzyme, anth 100.0 2.8E-45 9.4E-50 389.7 12.0 390 51-458 2-458 (535)
2 2qa1_A PGAE, polyketide oxygen 100.0 3.8E-43 1.3E-47 369.1 27.6 377 52-455 9-430 (500)
3 2qa2_A CABE, polyketide oxygen 100.0 4E-43 1.4E-47 368.8 23.7 377 52-455 10-431 (499)
4 2r0c_A REBC; flavin adenine di 100.0 9.1E-43 3.1E-47 370.7 14.8 384 52-455 24-482 (549)
5 1pn0_A Phenol 2-monooxygenase; 100.0 3.4E-41 1.2E-45 365.1 22.2 375 54-440 8-490 (665)
6 3rp8_A Flavoprotein monooxygen 100.0 1.4E-39 4.9E-44 334.1 32.1 340 51-408 20-386 (407)
7 2dkh_A 3-hydroxybenzoate hydro 100.0 4.4E-40 1.5E-44 355.8 21.2 377 53-440 31-478 (639)
8 3fmw_A Oxygenase; mithramycin, 100.0 6.2E-40 2.1E-44 349.2 20.0 385 52-455 47-482 (570)
9 2x3n_A Probable FAD-dependent 100.0 1.6E-38 5.6E-43 325.3 20.5 342 52-410 4-376 (399)
10 4hb9_A Similarities with proba 100.0 8.3E-38 2.9E-42 320.5 20.6 323 55-389 2-382 (412)
11 3oz2_A Digeranylgeranylglycero 100.0 2E-35 6.9E-40 300.9 27.8 315 53-381 3-340 (397)
12 1k0i_A P-hydroxybenzoate hydro 100.0 9.3E-37 3.2E-41 311.7 16.9 358 54-427 2-388 (394)
13 2vou_A 2,6-dihydroxypyridine h 100.0 2.8E-35 9.6E-40 301.1 26.1 315 52-393 3-370 (397)
14 3c96_A Flavin-containing monoo 100.0 2.6E-34 9E-39 295.2 27.9 344 53-411 3-396 (410)
15 3e1t_A Halogenase; flavoprotei 100.0 1.5E-34 5.1E-39 305.2 26.4 336 52-393 5-371 (512)
16 2xdo_A TETX2 protein; tetracyc 100.0 1E-33 3.4E-38 289.7 28.4 318 52-393 24-388 (398)
17 3atr_A Conserved archaeal prot 100.0 3.8E-34 1.3E-38 297.8 21.6 320 54-392 6-356 (453)
18 3alj_A 2-methyl-3-hydroxypyrid 100.0 8.1E-34 2.8E-38 288.5 23.4 306 53-384 10-343 (379)
19 3i3l_A Alkylhalidase CMLS; fla 100.0 4.4E-34 1.5E-38 304.7 21.9 341 52-398 21-390 (591)
20 3cgv_A Geranylgeranyl reductas 100.0 1.3E-32 4.4E-37 280.9 27.5 326 54-393 4-352 (397)
21 3nix_A Flavoprotein/dehydrogen 100.0 3.1E-32 1.1E-36 280.5 26.6 322 52-382 3-350 (421)
22 3c4a_A Probable tryptophan hyd 100.0 5.4E-31 1.9E-35 267.8 17.7 296 56-392 2-332 (381)
23 2gmh_A Electron transfer flavo 100.0 8E-30 2.8E-34 272.4 27.5 328 52-392 33-426 (584)
24 2pyx_A Tryptophan halogenase; 100.0 4.9E-29 1.7E-33 263.9 31.5 239 131-390 168-414 (526)
25 2weu_A Tryptophan 5-halogenase 100.0 8.5E-28 2.9E-32 253.7 27.8 244 130-400 165-416 (511)
26 2aqj_A Tryptophan halogenase, 100.0 9E-28 3.1E-32 255.0 26.4 232 131-390 158-398 (538)
27 2e4g_A Tryptophan halogenase; 100.0 2.7E-27 9.4E-32 251.7 29.2 235 131-391 187-430 (550)
28 3ihm_A Styrene monooxygenase A 99.9 2.4E-26 8.2E-31 237.2 16.4 306 52-387 20-374 (430)
29 2bry_A NEDD9 interacting prote 99.9 3.1E-24 1.1E-28 225.1 8.5 301 52-379 90-450 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 3.1E-18 1E-22 170.3 18.4 280 54-354 2-327 (336)
31 1ryi_A Glycine oxidase; flavop 99.6 1.4E-14 4.8E-19 146.5 14.3 278 50-352 13-361 (382)
32 2gag_B Heterotetrameric sarcos 99.5 6E-14 2.1E-18 142.9 16.0 195 134-351 170-373 (405)
33 1y56_B Sarcosine oxidase; dehy 99.5 6.3E-13 2.2E-17 134.3 22.0 277 53-352 4-354 (382)
34 3kkj_A Amine oxidase, flavin-c 99.5 4.6E-13 1.6E-17 127.5 17.1 39 54-92 2-40 (336)
35 3da1_A Glycerol-3-phosphate de 99.5 1.2E-12 4.1E-17 139.0 21.2 74 134-208 166-242 (561)
36 3nyc_A D-arginine dehydrogenas 99.5 7.4E-13 2.5E-17 133.5 17.8 149 52-208 7-219 (381)
37 2qcu_A Aerobic glycerol-3-phos 99.5 1.1E-12 3.8E-17 137.5 19.1 210 134-352 145-371 (501)
38 3dme_A Conserved exported prot 99.5 6.8E-13 2.3E-17 132.9 15.5 73 133-208 145-220 (369)
39 3ps9_A TRNA 5-methylaminomethy 99.4 2E-12 6.7E-17 140.7 18.8 67 133-205 412-480 (676)
40 3jsk_A Cypbp37 protein; octame 99.4 9.9E-13 3.4E-17 129.3 14.6 145 53-205 78-257 (344)
41 1rp0_A ARA6, thiazole biosynth 99.4 1.5E-12 5.1E-17 126.2 14.5 141 53-205 38-197 (284)
42 2gf3_A MSOX, monomeric sarcosi 99.4 7.1E-12 2.4E-16 126.7 18.2 146 54-206 3-213 (389)
43 2cul_A Glucose-inhibited divis 99.4 4.7E-12 1.6E-16 118.9 15.1 132 53-207 2-133 (232)
44 3pvc_A TRNA 5-methylaminomethy 99.4 4E-12 1.4E-16 138.4 16.7 62 133-200 407-470 (689)
45 3v76_A Flavoprotein; structura 99.4 2.4E-12 8E-17 131.5 12.9 140 50-199 23-187 (417)
46 1qo8_A Flavocytochrome C3 fuma 99.4 2.4E-12 8.2E-17 137.0 12.9 147 52-205 119-318 (566)
47 2oln_A NIKD protein; flavoprot 99.4 2.1E-11 7.3E-16 123.7 19.3 68 134-208 149-218 (397)
48 1y0p_A Fumarate reductase flav 99.3 1.1E-11 3.9E-16 132.0 16.2 153 52-205 124-323 (571)
49 2i0z_A NAD(FAD)-utilizing dehy 99.3 1.4E-11 4.8E-16 127.2 14.6 151 52-208 24-211 (447)
50 1kf6_A Fumarate reductase flav 99.3 8.3E-12 2.8E-16 133.4 12.9 69 138-206 134-204 (602)
51 2gjc_A Thiazole biosynthetic e 99.3 1.5E-11 5.3E-16 120.1 13.4 144 52-206 63-246 (326)
52 4dgk_A Phytoene dehydrogenase; 99.3 8.7E-11 3E-15 123.0 19.3 64 138-206 221-285 (501)
53 2ywl_A Thioredoxin reductase r 99.3 3E-11 1E-15 108.5 11.9 117 55-207 2-118 (180)
54 1chu_A Protein (L-aspartate ox 99.3 1.9E-11 6.5E-16 129.0 11.7 65 138-202 138-211 (540)
55 3ces_A MNMG, tRNA uridine 5-ca 99.3 3.4E-11 1.2E-15 127.6 13.6 143 53-206 27-188 (651)
56 4at0_A 3-ketosteroid-delta4-5a 99.2 4.3E-11 1.5E-15 125.7 14.1 63 139-203 203-268 (510)
57 3cp8_A TRNA uridine 5-carboxym 99.2 2.2E-11 7.5E-16 129.0 11.1 140 52-202 19-177 (641)
58 3nlc_A Uncharacterized protein 99.2 1.5E-11 5.1E-16 129.2 9.8 152 52-208 105-290 (549)
59 1d4d_A Flavocytochrome C fumar 99.2 7.5E-11 2.6E-15 125.5 14.8 152 53-205 125-323 (572)
60 2zxi_A TRNA uridine 5-carboxym 99.2 8.8E-11 3E-15 124.0 15.1 141 53-204 26-185 (637)
61 2rgh_A Alpha-glycerophosphate 99.2 8.2E-10 2.8E-14 117.4 22.5 72 135-207 185-259 (571)
62 3c4n_A Uncharacterized protein 99.2 4.2E-11 1.4E-15 122.1 12.1 151 52-209 34-248 (405)
63 3axb_A Putative oxidoreductase 99.2 1E-10 3.6E-15 120.7 14.4 69 134-208 177-264 (448)
64 2h88_A Succinate dehydrogenase 99.2 7.8E-11 2.7E-15 125.9 13.0 63 138-201 155-219 (621)
65 2wdq_A Succinate dehydrogenase 99.2 6.1E-11 2.1E-15 126.4 12.0 63 138-201 143-208 (588)
66 4a9w_A Monooxygenase; baeyer-v 99.2 4.5E-11 1.5E-15 119.0 10.3 129 54-200 3-133 (357)
67 3dje_A Fructosyl amine: oxygen 99.2 3.5E-10 1.2E-14 116.3 15.6 63 133-200 156-222 (438)
68 2gqf_A Hypothetical protein HI 99.1 1.3E-10 4.5E-15 118.0 11.0 135 54-199 4-168 (401)
69 2zbw_A Thioredoxin reductase; 99.1 2.3E-10 7.9E-15 113.1 12.3 124 53-206 4-128 (335)
70 3ka7_A Oxidoreductase; structu 99.1 2.7E-09 9.3E-14 109.0 20.3 58 138-201 196-254 (425)
71 3ab1_A Ferredoxin--NADP reduct 99.1 2.1E-10 7.1E-15 114.8 11.6 125 53-206 13-138 (360)
72 3nrn_A Uncharacterized protein 99.1 4E-09 1.4E-13 107.8 21.2 59 139-206 190-249 (421)
73 3fbs_A Oxidoreductase; structu 99.1 5.1E-10 1.8E-14 108.3 13.7 113 54-201 2-114 (297)
74 2bs2_A Quinol-fumarate reducta 99.1 3.4E-10 1.2E-14 121.8 13.2 62 139-201 159-222 (660)
75 2uzz_A N-methyl-L-tryptophan o 99.1 1.8E-10 6.2E-15 115.6 10.3 61 133-200 144-205 (372)
76 3i6d_A Protoporphyrinogen oxid 99.1 1.6E-09 5.6E-14 112.1 17.6 39 53-91 4-48 (470)
77 3qj4_A Renalase; FAD/NAD(P)-bi 99.1 1.4E-09 4.9E-14 107.9 15.7 37 55-91 2-41 (342)
78 4fk1_A Putative thioredoxin re 99.1 8.2E-10 2.8E-14 107.8 13.0 114 52-199 4-117 (304)
79 3itj_A Thioredoxin reductase 1 99.1 2.4E-10 8.2E-15 112.9 9.2 122 52-201 20-144 (338)
80 3gyx_A Adenylylsulfate reducta 99.0 6.5E-10 2.2E-14 119.6 11.8 67 135-201 163-235 (662)
81 2gv8_A Monooxygenase; FMO, FAD 99.0 9.8E-10 3.4E-14 113.4 12.6 146 53-201 5-179 (447)
82 2q0l_A TRXR, thioredoxin reduc 99.0 1.7E-09 5.8E-14 105.6 13.7 115 55-202 2-117 (311)
83 1vdc_A NTR, NADPH dependent th 99.0 3.8E-10 1.3E-14 111.5 7.5 120 53-201 7-126 (333)
84 2e5v_A L-aspartate oxidase; ar 99.0 8.2E-10 2.8E-14 114.7 9.6 62 138-204 119-181 (472)
85 1jnr_A Adenylylsulfate reducta 99.0 3.1E-09 1E-13 114.5 13.7 65 137-201 150-220 (643)
86 3cty_A Thioredoxin reductase; 99.0 3.3E-09 1.1E-13 104.1 12.7 113 53-200 15-127 (319)
87 2q7v_A Thioredoxin reductase; 99.0 1.9E-09 6.6E-14 106.1 10.9 116 53-200 7-124 (325)
88 3f8d_A Thioredoxin reductase ( 99.0 2.9E-09 9.9E-14 104.3 11.9 113 53-200 14-126 (323)
89 1pj5_A N,N-dimethylglycine oxi 99.0 4.4E-09 1.5E-13 116.9 14.6 150 53-208 3-217 (830)
90 3lzw_A Ferredoxin--NADP reduct 98.9 1.8E-09 6.3E-14 106.2 10.0 117 54-200 7-124 (332)
91 1c0p_A D-amino acid oxidase; a 98.9 7.8E-09 2.7E-13 103.4 14.6 36 52-87 4-39 (363)
92 3gwf_A Cyclohexanone monooxyge 98.9 1.8E-09 6.3E-14 113.8 9.6 136 53-201 7-149 (540)
93 1w4x_A Phenylacetone monooxyge 98.9 5.7E-09 2E-13 110.3 12.9 138 52-201 14-156 (542)
94 2xve_A Flavin-containing monoo 98.9 6.1E-09 2.1E-13 107.9 12.8 144 55-202 3-169 (464)
95 1trb_A Thioredoxin reductase; 98.9 2.9E-09 9.8E-14 104.4 9.0 114 54-201 5-118 (320)
96 2a87_A TRXR, TR, thioredoxin r 98.9 4.2E-09 1.4E-13 104.1 10.3 116 52-201 12-128 (335)
97 3s5w_A L-ornithine 5-monooxyge 98.9 1E-08 3.5E-13 106.1 12.4 142 53-201 29-194 (463)
98 1fl2_A Alkyl hydroperoxide red 98.9 5.9E-09 2E-13 101.7 10.0 114 54-201 1-117 (310)
99 3d1c_A Flavin-containing putat 98.8 1.3E-08 4.6E-13 101.7 12.2 134 54-200 4-144 (369)
100 4ap3_A Steroid monooxygenase; 98.8 3E-09 1E-13 112.3 7.1 136 52-200 19-160 (549)
101 4a5l_A Thioredoxin reductase; 98.8 1.8E-08 6.1E-13 98.4 11.8 118 54-199 4-121 (314)
102 3uox_A Otemo; baeyer-villiger 98.8 4.7E-09 1.6E-13 110.8 7.3 137 52-201 7-149 (545)
103 4gcm_A TRXR, thioredoxin reduc 98.8 3.8E-08 1.3E-12 96.2 12.2 113 50-198 2-115 (312)
104 1hyu_A AHPF, alkyl hydroperoxi 98.8 2.5E-08 8.6E-13 104.8 10.9 115 52-200 210-327 (521)
105 1dxl_A Dihydrolipoamide dehydr 98.7 1.9E-08 6.5E-13 104.4 8.7 132 52-203 4-155 (470)
106 2a8x_A Dihydrolipoyl dehydroge 98.7 1.8E-08 6.1E-13 104.4 8.4 131 54-202 3-149 (464)
107 3r9u_A Thioredoxin reductase; 98.7 7.6E-08 2.6E-12 93.7 12.1 113 53-199 3-118 (315)
108 3g3e_A D-amino-acid oxidase; F 98.7 4.3E-09 1.5E-13 104.8 3.0 32 56-87 2-39 (351)
109 1v59_A Dihydrolipoamide dehydr 98.6 4.8E-08 1.6E-12 101.6 8.2 36 54-89 5-40 (478)
110 3h8l_A NADH oxidase; membrane 98.6 5.1E-08 1.7E-12 99.2 7.9 110 55-200 2-114 (409)
111 3urh_A Dihydrolipoyl dehydroge 98.6 7.2E-08 2.5E-12 100.6 9.2 128 51-198 22-169 (491)
112 1zmd_A Dihydrolipoyl dehydroge 98.6 1.7E-07 5.8E-12 97.3 11.4 131 53-202 5-155 (474)
113 1ebd_A E3BD, dihydrolipoamide 98.6 1.4E-07 4.6E-12 97.5 10.3 126 54-201 3-147 (455)
114 3l8k_A Dihydrolipoyl dehydroge 98.6 1.2E-07 4E-12 98.3 9.7 132 54-198 4-143 (466)
115 3cgb_A Pyridine nucleotide-dis 98.6 1.1E-07 3.9E-12 98.8 9.4 114 54-200 36-153 (480)
116 1q1r_A Putidaredoxin reductase 98.6 1.2E-07 4E-12 97.3 9.0 110 54-201 4-116 (431)
117 3g5s_A Methylenetetrahydrofola 98.5 9.6E-08 3.3E-12 94.4 7.5 100 55-165 2-125 (443)
118 3nks_A Protoporphyrinogen oxid 98.5 4.9E-07 1.7E-11 93.7 13.3 36 55-90 3-40 (477)
119 1ojt_A Surface protein; redox- 98.5 9E-08 3.1E-12 99.6 7.7 36 54-89 6-41 (482)
120 3ics_A Coenzyme A-disulfide re 98.5 2.6E-07 8.8E-12 98.6 11.1 114 52-198 34-151 (588)
121 3lov_A Protoporphyrinogen oxid 98.5 3.1E-07 1.1E-11 95.2 11.3 37 54-90 4-42 (475)
122 2cdu_A NADPH oxidase; flavoenz 98.5 2.6E-07 9E-12 95.2 9.7 114 55-200 1-118 (452)
123 3iwa_A FAD-dependent pyridine 98.5 2.9E-07 1E-11 95.4 10.0 118 54-198 3-124 (472)
124 1nhp_A NADH peroxidase; oxidor 98.5 2.5E-07 8.6E-12 95.2 9.2 110 56-199 2-115 (447)
125 3lad_A Dihydrolipoamide dehydr 98.5 2.4E-07 8.2E-12 96.2 9.1 37 53-89 2-38 (476)
126 2ivd_A PPO, PPOX, protoporphyr 98.5 3.1E-07 1.1E-11 95.2 9.9 41 52-92 14-54 (478)
127 3qfa_A Thioredoxin reductase 1 98.5 4.8E-07 1.6E-11 95.0 11.1 36 52-87 30-65 (519)
128 2qae_A Lipoamide, dihydrolipoy 98.5 2.8E-07 9.6E-12 95.5 8.8 128 54-200 2-149 (468)
129 4b63_A L-ornithine N5 monooxyg 98.5 1.6E-06 5.6E-11 90.4 14.5 63 134-197 141-212 (501)
130 3dgz_A Thioredoxin reductase 2 98.4 4.4E-07 1.5E-11 94.5 9.9 35 52-86 4-38 (488)
131 3sx6_A Sulfide-quinone reducta 98.4 1.2E-07 4.1E-12 97.3 5.5 108 55-202 5-115 (437)
132 2bc0_A NADH oxidase; flavoprot 98.4 3.1E-07 1E-11 95.8 8.6 113 53-200 34-150 (490)
133 3pl8_A Pyranose 2-oxidase; sub 98.4 8.5E-07 2.9E-11 94.9 12.2 53 152-204 273-329 (623)
134 1xdi_A RV3303C-LPDA; reductase 98.4 3.9E-07 1.3E-11 95.2 9.3 131 54-200 2-157 (499)
135 3oc4_A Oxidoreductase, pyridin 98.4 4.4E-07 1.5E-11 93.6 9.1 110 55-199 3-115 (452)
136 3klj_A NAD(FAD)-dependent dehy 98.4 5.7E-07 2E-11 90.6 9.5 108 52-198 7-115 (385)
137 3lxd_A FAD-dependent pyridine 98.4 4.3E-07 1.5E-11 92.5 8.6 108 53-198 8-118 (415)
138 1zk7_A HGII, reductase, mercur 98.4 3.1E-06 1E-10 87.6 14.1 34 53-86 3-36 (467)
139 2eq6_A Pyruvate dehydrogenase 98.4 2.4E-06 8.2E-11 88.3 12.8 103 54-202 169-274 (464)
140 3h28_A Sulfide-quinone reducta 98.3 5.7E-07 2E-11 92.1 7.4 106 55-200 3-110 (430)
141 2v3a_A Rubredoxin reductase; a 98.3 3.7E-06 1.3E-10 84.6 13.2 100 54-201 145-245 (384)
142 3dgh_A TRXR-1, thioredoxin red 98.3 1.8E-06 6.3E-11 89.7 11.2 35 52-86 7-41 (483)
143 2hqm_A GR, grase, glutathione 98.3 1.3E-06 4.3E-11 90.8 10.0 35 53-87 10-44 (479)
144 3fg2_P Putative rubredoxin red 98.3 9.2E-07 3.1E-11 89.7 8.6 106 55-198 2-109 (404)
145 3t37_A Probable dehydrogenase; 98.3 1.1E-06 3.8E-11 92.3 9.5 60 139-199 211-271 (526)
146 2yqu_A 2-oxoglutarate dehydrog 98.3 9.5E-07 3.3E-11 91.1 8.6 35 55-89 2-36 (455)
147 3o0h_A Glutathione reductase; 98.3 1.5E-06 5.1E-11 90.4 10.0 37 50-86 22-58 (484)
148 3ntd_A FAD-dependent pyridine 98.3 1.4E-06 4.7E-11 92.4 9.5 111 55-198 2-116 (565)
149 4dna_A Probable glutathione re 98.3 1.7E-06 5.9E-11 89.4 10.0 34 53-86 4-37 (463)
150 3q9t_A Choline dehydrogenase a 98.3 6.7E-06 2.3E-10 87.0 14.3 51 150-200 217-271 (577)
151 2yqu_A 2-oxoglutarate dehydrog 98.3 4.8E-06 1.6E-10 85.8 13.0 99 54-201 167-266 (455)
152 3kd9_A Coenzyme A disulfide re 98.3 1.2E-06 4.1E-11 90.2 8.1 35 54-88 3-39 (449)
153 4gde_A UDP-galactopyranose mut 98.3 3.7E-07 1.3E-11 95.5 4.0 40 53-92 9-49 (513)
154 3ef6_A Toluene 1,2-dioxygenase 98.2 8.7E-07 3E-11 90.1 6.2 105 55-198 3-110 (410)
155 2eq6_A Pyruvate dehydrogenase 98.2 2.4E-06 8.3E-11 88.3 9.6 34 54-87 6-39 (464)
156 4b1b_A TRXR, thioredoxin reduc 98.2 5E-06 1.7E-10 87.3 12.0 35 53-87 41-75 (542)
157 3fpz_A Thiazole biosynthetic e 98.2 5.6E-07 1.9E-11 88.5 4.5 40 52-91 63-104 (326)
158 1xhc_A NADH oxidase /nitrite r 98.2 2E-06 6.8E-11 86.1 8.2 35 53-88 7-41 (367)
159 1fec_A Trypanothione reductase 98.2 5.8E-06 2E-10 86.0 12.1 32 54-85 3-35 (490)
160 1y56_A Hypothetical protein PH 98.2 1.6E-06 5.4E-11 90.4 7.5 112 53-199 107-219 (493)
161 3dk9_A Grase, GR, glutathione 98.2 1.1E-06 3.7E-11 91.3 5.8 35 52-86 18-52 (478)
162 2r9z_A Glutathione amide reduc 98.2 7.9E-06 2.7E-10 84.4 12.1 100 54-201 166-266 (463)
163 3hyw_A Sulfide-quinone reducta 98.2 2.3E-06 7.8E-11 87.6 7.9 104 56-199 4-109 (430)
164 2gqw_A Ferredoxin reductase; f 98.2 4.2E-06 1.4E-10 85.0 9.6 106 53-200 6-114 (408)
165 3qvp_A Glucose oxidase; oxidor 98.2 7.6E-06 2.6E-10 86.5 11.6 52 148-199 236-293 (583)
166 1nhp_A NADH peroxidase; oxidor 98.2 1.2E-05 4E-10 82.6 12.8 100 53-201 148-248 (447)
167 4g6h_A Rotenone-insensitive NA 98.1 5.3E-06 1.8E-10 86.5 9.9 36 52-87 40-75 (502)
168 1trb_A Thioredoxin reductase; 98.1 2.5E-05 8.7E-10 75.9 14.2 101 54-200 145-248 (320)
169 2bcg_G Secretory pathway GDP d 98.1 1.6E-06 5.4E-11 89.4 5.8 41 53-93 10-50 (453)
170 1ges_A Glutathione reductase; 98.1 7.1E-06 2.4E-10 84.4 10.2 100 54-201 167-267 (450)
171 4eqs_A Coenzyme A disulfide re 98.1 9.3E-06 3.2E-10 83.2 10.9 111 56-199 2-116 (437)
172 2gag_A Heterotetrameric sarcos 98.1 1E-05 3.5E-10 90.9 11.9 114 54-199 128-253 (965)
173 1fl2_A Alkyl hydroperoxide red 98.1 2.8E-05 9.7E-10 75.3 13.6 96 55-199 145-242 (310)
174 3ab1_A Ferredoxin--NADP reduct 98.1 2.3E-05 8E-10 77.8 13.2 101 54-200 163-264 (360)
175 1ebd_A E3BD, dihydrolipoamide 98.1 1.7E-05 5.9E-10 81.6 12.3 102 54-201 170-272 (455)
176 1v59_A Dihydrolipoamide dehydr 98.1 2.6E-05 9E-10 80.7 13.6 104 54-201 183-289 (478)
177 3fg2_P Putative rubredoxin red 98.1 3.2E-05 1.1E-09 78.3 13.5 101 54-201 142-243 (404)
178 3k7m_X 6-hydroxy-L-nicotine ox 98.1 2.1E-06 7.4E-11 87.6 4.8 36 55-90 2-37 (431)
179 2b9w_A Putative aminooxidase; 98.1 3.4E-06 1.2E-10 85.9 6.3 39 53-91 5-44 (424)
180 3lxd_A FAD-dependent pyridine 98.1 3.7E-05 1.3E-09 78.1 13.7 101 54-201 152-253 (415)
181 2v3a_A Rubredoxin reductase; a 98.1 4.1E-06 1.4E-10 84.2 6.5 34 54-87 4-39 (384)
182 2e1m_A L-glutamate oxidase; L- 98.1 3.5E-06 1.2E-10 84.1 5.9 41 52-92 42-83 (376)
183 3itj_A Thioredoxin reductase 1 98.0 4E-05 1.4E-09 75.0 13.4 96 54-198 173-270 (338)
184 2x8g_A Thioredoxin glutathione 98.0 1.5E-05 5.1E-10 85.1 11.1 35 52-86 105-139 (598)
185 1rsg_A FMS1 protein; FAD bindi 98.0 1.9E-06 6.3E-11 90.4 3.9 41 53-93 7-48 (516)
186 2q0l_A TRXR, thioredoxin reduc 98.0 7.4E-05 2.5E-09 72.3 15.1 97 54-199 143-241 (311)
187 3vrd_B FCCB subunit, flavocyto 98.0 1.1E-05 3.8E-10 81.4 9.6 104 56-200 4-109 (401)
188 2yg5_A Putrescine oxidase; oxi 98.0 2.1E-06 7E-11 88.4 4.1 40 53-92 4-43 (453)
189 2jae_A L-amino acid oxidase; o 98.0 4.3E-06 1.5E-10 86.9 6.3 41 52-92 9-49 (489)
190 2qae_A Lipoamide, dihydrolipoy 98.0 2.9E-05 9.9E-10 80.2 12.5 103 54-201 174-278 (468)
191 1mo9_A ORF3; nucleotide bindin 98.0 2.9E-05 9.8E-10 81.5 12.1 102 55-201 215-318 (523)
192 3hdq_A UDP-galactopyranose mut 98.0 4.6E-06 1.6E-10 84.0 5.6 39 52-90 27-65 (397)
193 1gpe_A Protein (glucose oxidas 98.0 2.5E-05 8.6E-10 83.0 11.4 53 148-200 240-298 (587)
194 1s3e_A Amine oxidase [flavin-c 98.0 4.4E-06 1.5E-10 87.6 5.3 39 54-92 4-42 (520)
195 1v0j_A UDP-galactopyranose mut 98.0 5.2E-06 1.8E-10 84.0 5.4 39 53-91 6-45 (399)
196 1onf_A GR, grase, glutathione 98.0 3.7E-05 1.3E-09 80.2 11.9 101 54-201 176-277 (500)
197 3r9u_A Thioredoxin reductase; 98.0 8.7E-05 3E-09 71.8 13.9 96 54-198 147-243 (315)
198 3urh_A Dihydrolipoyl dehydroge 98.0 6.2E-05 2.1E-09 78.2 13.5 103 54-201 198-302 (491)
199 2hqm_A GR, grase, glutathione 98.0 2.5E-05 8.7E-10 80.9 10.5 101 54-201 185-287 (479)
200 1lvl_A Dihydrolipoamide dehydr 98.0 1.8E-05 6.1E-10 81.6 9.2 99 54-201 171-270 (458)
201 2a8x_A Dihydrolipoyl dehydroge 97.9 2.7E-05 9.1E-10 80.4 10.4 102 54-201 171-273 (464)
202 3fim_B ARYL-alcohol oxidase; A 97.9 1.5E-05 5E-10 84.2 8.5 54 146-199 215-276 (566)
203 1q1r_A Putidaredoxin reductase 97.9 4.9E-05 1.7E-09 77.6 12.1 100 54-200 149-251 (431)
204 2zbw_A Thioredoxin reductase; 97.9 0.00011 3.7E-09 72.0 14.0 100 54-200 152-253 (335)
205 3cty_A Thioredoxin reductase; 97.9 7.7E-05 2.6E-09 72.6 12.8 95 55-199 156-252 (319)
206 3ic9_A Dihydrolipoamide dehydr 97.9 7.2E-05 2.4E-09 77.8 13.3 102 54-201 174-276 (492)
207 2wpf_A Trypanothione reductase 97.9 3E-05 1E-09 80.8 10.3 32 54-85 7-39 (495)
208 1dxl_A Dihydrolipoamide dehydr 97.9 2E-05 6.8E-10 81.5 9.0 103 54-201 177-281 (470)
209 1ojt_A Surface protein; redox- 97.9 2.9E-05 9.8E-10 80.6 10.1 101 54-201 185-288 (482)
210 2cdu_A NADPH oxidase; flavoenz 97.9 5.8E-05 2E-09 77.6 12.3 100 54-201 149-249 (452)
211 1sez_A Protoporphyrinogen oxid 97.9 7.6E-06 2.6E-10 85.3 5.7 40 53-92 12-51 (504)
212 1zmd_A Dihydrolipoyl dehydroge 97.9 5.5E-05 1.9E-09 78.3 12.1 105 54-201 178-284 (474)
213 2vvm_A Monoamine oxidase N; FA 97.9 5.9E-06 2E-10 86.0 4.7 39 54-92 39-77 (495)
214 1m6i_A Programmed cell death p 97.9 1.8E-05 6E-10 82.4 7.9 37 53-89 10-48 (493)
215 2q7v_A Thioredoxin reductase; 97.9 0.00014 4.9E-09 70.9 14.0 96 54-199 152-249 (325)
216 1vdc_A NTR, NADPH dependent th 97.9 0.00014 4.9E-09 71.0 13.9 97 54-199 159-259 (333)
217 1fec_A Trypanothione reductase 97.9 4.9E-05 1.7E-09 79.0 10.8 100 54-201 187-290 (490)
218 1i8t_A UDP-galactopyranose mut 97.9 8.7E-06 3E-10 81.4 4.9 37 55-91 2-38 (367)
219 1hyu_A AHPF, alkyl hydroperoxi 97.9 0.0001 3.5E-09 77.2 13.0 95 55-198 356-452 (521)
220 1xdi_A RV3303C-LPDA; reductase 97.9 4.9E-05 1.7E-09 79.2 10.5 99 54-201 182-281 (499)
221 2gqw_A Ferredoxin reductase; f 97.8 0.00011 3.6E-09 74.6 12.6 95 54-200 145-240 (408)
222 2wpf_A Trypanothione reductase 97.8 5.2E-05 1.8E-09 78.9 10.5 100 54-201 191-294 (495)
223 2bi7_A UDP-galactopyranose mut 97.8 1.4E-05 4.9E-10 80.3 5.8 37 54-90 3-39 (384)
224 3ef6_A Toluene 1,2-dioxygenase 97.8 4.6E-05 1.6E-09 77.3 9.5 100 54-201 143-243 (410)
225 2bc0_A NADH oxidase; flavoprot 97.8 0.00011 3.8E-09 76.3 12.6 99 54-201 194-293 (490)
226 3lad_A Dihydrolipoamide dehydr 97.8 0.00015 5.3E-09 74.9 13.5 101 54-200 180-281 (476)
227 4dsg_A UDP-galactopyranose mut 97.8 1.6E-05 5.6E-10 82.5 6.0 39 52-90 7-46 (484)
228 3o0h_A Glutathione reductase; 97.8 7.8E-05 2.7E-09 77.3 11.1 99 54-201 191-290 (484)
229 3ic9_A Dihydrolipoamide dehydr 97.8 7.1E-06 2.4E-10 85.4 3.1 35 53-87 7-41 (492)
230 3oc4_A Oxidoreductase, pyridin 97.8 0.00019 6.5E-09 73.7 13.7 99 54-201 147-246 (452)
231 2iid_A L-amino-acid oxidase; f 97.8 1.4E-05 4.9E-10 83.1 5.2 41 52-92 31-71 (498)
232 3dgz_A Thioredoxin reductase 2 97.8 0.00019 6.5E-09 74.5 13.7 102 54-200 185-288 (488)
233 3dgh_A TRXR-1, thioredoxin red 97.8 0.00014 4.8E-09 75.4 12.3 102 54-200 187-290 (483)
234 1d5t_A Guanine nucleotide diss 97.8 2.1E-05 7.3E-10 80.4 5.9 56 139-200 235-291 (433)
235 3p1w_A Rabgdi protein; GDI RAB 97.8 1.6E-05 5.6E-10 81.6 4.8 55 139-198 257-313 (475)
236 3iwa_A FAD-dependent pyridine 97.8 0.00012 4.1E-09 75.6 11.4 99 54-200 159-259 (472)
237 1m6i_A Programmed cell death p 97.7 0.00019 6.4E-09 74.7 12.8 100 54-201 180-284 (493)
238 4b1b_A TRXR, thioredoxin reduc 97.7 0.00017 5.9E-09 75.5 12.3 98 54-201 223-321 (542)
239 3ntd_A FAD-dependent pyridine 97.7 0.00019 6.5E-09 75.9 12.6 98 55-201 152-269 (565)
240 3f8d_A Thioredoxin reductase ( 97.7 0.00032 1.1E-08 67.9 13.2 97 54-200 154-252 (323)
241 3cgb_A Pyridine nucleotide-dis 97.7 0.00014 4.9E-09 75.2 11.2 98 53-200 185-283 (480)
242 2vdc_G Glutamate synthase [NAD 97.7 3.3E-05 1.1E-09 79.5 6.2 37 52-88 120-156 (456)
243 3qfa_A Thioredoxin reductase 1 97.7 0.00029 9.8E-09 73.7 13.2 101 54-199 210-315 (519)
244 1zk7_A HGII, reductase, mercur 97.7 0.0002 6.9E-09 73.8 11.7 97 54-201 176-273 (467)
245 1mo9_A ORF3; nucleotide bindin 97.7 3.5E-05 1.2E-09 80.8 5.9 37 52-88 41-77 (523)
246 3dk9_A Grase, GR, glutathione 97.7 0.00025 8.6E-09 73.3 12.4 103 54-200 187-294 (478)
247 1onf_A GR, grase, glutathione 97.7 2.9E-05 1E-09 80.9 5.2 34 54-87 2-35 (500)
248 2x8g_A Thioredoxin glutathione 97.7 0.00031 1.1E-08 74.8 13.3 100 55-200 287-396 (598)
249 2r9z_A Glutathione amide reduc 97.6 3.1E-05 1.1E-09 79.9 4.9 34 53-86 3-36 (463)
250 1xhc_A NADH oxidase /nitrite r 97.6 0.00017 5.8E-09 71.9 10.0 92 55-201 144-236 (367)
251 1ges_A Glutathione reductase; 97.6 2.9E-05 1E-09 79.8 4.1 33 54-86 4-36 (450)
252 3s5w_A L-ornithine 5-monooxyge 97.6 0.00029 1E-08 72.4 11.7 141 54-199 227-377 (463)
253 4dna_A Probable glutathione re 97.6 0.00019 6.6E-09 73.9 10.2 98 54-200 170-269 (463)
254 3k30_A Histamine dehydrogenase 97.6 5.5E-05 1.9E-09 82.1 6.2 38 52-89 389-426 (690)
255 1b37_A Protein (polyamine oxid 97.6 5E-05 1.7E-09 78.4 5.3 39 53-91 3-42 (472)
256 1lvl_A Dihydrolipoamide dehydr 97.5 4.2E-05 1.4E-09 78.8 4.3 34 53-86 4-37 (458)
257 4gut_A Lysine-specific histone 97.5 5E-05 1.7E-09 83.0 5.1 39 53-91 335-373 (776)
258 1kdg_A CDH, cellobiose dehydro 97.5 5.3E-05 1.8E-09 79.9 5.0 58 142-199 199-261 (546)
259 3d1c_A Flavin-containing putat 97.5 0.0006 2.1E-08 67.5 12.0 105 55-200 167-273 (369)
260 3ics_A Coenzyme A-disulfide re 97.5 0.00035 1.2E-08 74.3 10.6 97 54-201 187-284 (588)
261 2a87_A TRXR, TR, thioredoxin r 97.5 0.00032 1.1E-08 68.7 9.6 96 54-199 155-252 (335)
262 2z3y_A Lysine-specific histone 97.5 8.5E-05 2.9E-09 80.1 5.8 40 52-91 105-144 (662)
263 2xag_A Lysine-specific histone 97.5 9.4E-05 3.2E-09 81.5 6.0 41 52-92 276-316 (852)
264 1o94_A Tmadh, trimethylamine d 97.5 0.0001 3.5E-09 80.4 6.2 38 52-89 387-424 (729)
265 3lzw_A Ferredoxin--NADP reduct 97.5 0.00069 2.4E-08 65.9 11.5 95 54-199 154-250 (332)
266 3l8k_A Dihydrolipoyl dehydroge 97.4 0.00057 2E-08 70.4 11.2 101 54-201 172-274 (466)
267 4a5l_A Thioredoxin reductase; 97.4 0.0018 6.3E-08 62.4 14.2 96 54-198 152-249 (314)
268 1ps9_A 2,4-dienoyl-COA reducta 97.4 0.00014 4.9E-09 78.5 6.2 38 52-89 371-408 (671)
269 1ju2_A HydroxynitrIle lyase; f 97.4 5.9E-05 2E-09 79.3 2.7 37 52-89 24-60 (536)
270 1lqt_A FPRA; NADP+ derivative, 97.3 0.00012 4.1E-09 75.3 4.4 36 54-89 3-45 (456)
271 4eqs_A Coenzyme A disulfide re 97.3 0.00067 2.3E-08 69.2 9.5 94 54-200 147-241 (437)
272 1cjc_A Protein (adrenodoxin re 97.3 0.0016 5.5E-08 66.8 11.9 138 54-200 145-334 (460)
273 1gte_A Dihydropyrimidine dehyd 97.2 0.00024 8.1E-09 80.4 5.6 35 54-88 187-222 (1025)
274 3kd9_A Coenzyme A disulfide re 97.2 0.0018 6.3E-08 66.2 11.8 96 55-200 149-245 (449)
275 1cjc_A Protein (adrenodoxin re 97.2 0.00022 7.7E-09 73.3 4.9 37 53-89 5-43 (460)
276 4g6h_A Rotenone-insensitive NA 97.2 0.0011 3.9E-08 68.8 10.0 96 56-198 219-331 (502)
277 1n4w_A CHOD, cholesterol oxida 97.1 0.00027 9.2E-09 73.6 4.4 57 144-200 227-289 (504)
278 4gcm_A TRXR, thioredoxin reduc 97.1 0.0079 2.7E-07 57.9 14.3 33 55-87 146-178 (312)
279 1coy_A Cholesterol oxidase; ox 97.1 0.00039 1.3E-08 72.5 5.1 57 144-200 232-294 (507)
280 2jbv_A Choline oxidase; alcoho 97.1 0.00038 1.3E-08 73.2 5.1 57 142-198 212-272 (546)
281 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00022 7.5E-09 76.6 3.0 36 54-89 56-100 (721)
282 1lqt_A FPRA; NADP+ derivative, 97.0 0.002 6.8E-08 66.1 10.1 138 54-199 147-326 (456)
283 2gag_A Heterotetrameric sarcos 97.0 0.00098 3.3E-08 74.9 8.2 94 55-201 285-385 (965)
284 3klj_A NAD(FAD)-dependent dehy 97.0 0.00043 1.5E-08 69.5 4.1 85 55-200 147-232 (385)
285 3fbs_A Oxidoreductase; structu 96.9 0.0018 6.2E-08 61.7 7.9 85 54-198 141-225 (297)
286 1gte_A Dihydropyrimidine dehyd 96.9 0.0047 1.6E-07 69.8 11.8 96 55-198 333-441 (1025)
287 2vdc_G Glutamate synthase [NAD 96.8 0.0021 7.1E-08 66.0 7.3 35 53-87 263-298 (456)
288 3k30_A Histamine dehydrogenase 96.7 0.0046 1.6E-07 66.9 10.0 97 54-198 523-623 (690)
289 1vg0_A RAB proteins geranylger 96.6 0.0017 5.9E-08 68.8 5.7 39 53-91 7-45 (650)
290 3gwf_A Cyclohexanone monooxyge 96.5 0.0032 1.1E-07 66.0 6.4 36 53-88 177-212 (540)
291 1ps9_A 2,4-dienoyl-COA reducta 96.4 0.014 4.8E-07 62.9 11.1 50 143-199 578-628 (671)
292 2xve_A Flavin-containing monoo 96.2 0.015 5E-07 59.7 9.8 35 54-88 197-231 (464)
293 3uox_A Otemo; baeyer-villiger 96.1 0.0032 1.1E-07 66.1 4.0 36 53-88 184-219 (545)
294 2gv8_A Monooxygenase; FMO, FAD 96.0 0.021 7.2E-07 58.2 9.8 34 54-87 212-246 (447)
295 2g1u_A Hypothetical protein TM 96.0 0.007 2.4E-07 52.0 5.2 34 54-87 19-52 (155)
296 3fwz_A Inner membrane protein 95.9 0.0092 3.1E-07 50.3 5.4 34 54-87 7-40 (140)
297 1lss_A TRK system potassium up 95.6 0.012 4.1E-07 49.1 5.0 33 55-87 5-37 (140)
298 1id1_A Putative potassium chan 95.6 0.015 5.1E-07 49.7 5.5 34 54-87 3-36 (153)
299 1o94_A Tmadh, trimethylamine d 95.6 0.018 6.2E-07 62.6 7.4 34 54-87 528-563 (729)
300 3llv_A Exopolyphosphatase-rela 95.6 0.013 4.5E-07 49.2 5.0 33 55-87 7-39 (141)
301 3ic5_A Putative saccharopine d 95.3 0.016 5.3E-07 46.7 4.5 33 55-87 6-39 (118)
302 3sx6_A Sulfide-quinone reducta 95.3 0.059 2E-06 54.6 9.7 99 55-197 150-267 (437)
303 3h28_A Sulfide-quinone reducta 95.3 0.049 1.7E-06 55.0 9.1 52 141-198 203-255 (430)
304 4fk1_A Putative thioredoxin re 95.2 0.04 1.4E-06 52.7 7.7 87 55-197 147-234 (304)
305 2hmt_A YUAA protein; RCK, KTN, 94.7 0.027 9.2E-07 47.1 4.4 33 55-87 7-39 (144)
306 3c85_A Putative glutathione-re 94.7 0.033 1.1E-06 49.0 5.1 34 54-87 39-73 (183)
307 1f0y_A HCDH, L-3-hydroxyacyl-C 94.1 0.054 1.9E-06 52.0 5.5 33 55-87 16-48 (302)
308 1pzg_A LDH, lactate dehydrogen 94.0 0.054 1.8E-06 52.8 5.3 35 53-87 8-43 (331)
309 3l4b_C TRKA K+ channel protien 94.0 0.042 1.4E-06 49.9 4.3 32 56-87 2-33 (218)
310 3h8l_A NADH oxidase; membrane 93.7 0.19 6.4E-06 50.3 9.0 50 140-199 220-270 (409)
311 3ado_A Lambda-crystallin; L-gu 93.7 0.047 1.6E-06 52.7 4.2 34 55-88 7-40 (319)
312 3lk7_A UDP-N-acetylmuramoylala 93.6 0.064 2.2E-06 54.7 5.4 34 54-87 9-42 (451)
313 3dfz_A SIRC, precorrin-2 dehyd 93.5 0.079 2.7E-06 48.3 5.2 35 52-86 29-63 (223)
314 3i83_A 2-dehydropantoate 2-red 93.4 0.072 2.4E-06 51.6 5.0 33 55-87 3-35 (320)
315 2x5o_A UDP-N-acetylmuramoylala 93.3 0.06 2E-06 54.7 4.6 36 55-90 6-41 (439)
316 4dio_A NAD(P) transhydrogenase 93.3 0.089 3E-06 52.4 5.5 35 54-88 190-224 (405)
317 3tl2_A Malate dehydrogenase; c 93.2 0.092 3.1E-06 50.7 5.5 38 50-87 4-42 (315)
318 1kyq_A Met8P, siroheme biosynt 93.0 0.064 2.2E-06 50.5 3.9 34 54-87 13-46 (274)
319 4e12_A Diketoreductase; oxidor 93.0 0.1 3.5E-06 49.5 5.3 33 55-87 5-37 (283)
320 1jw9_B Molybdopterin biosynthe 92.9 0.074 2.5E-06 49.5 4.2 35 54-88 31-66 (249)
321 2raf_A Putative dinucleotide-b 92.8 0.11 3.9E-06 46.8 5.2 35 54-88 19-53 (209)
322 1ks9_A KPA reductase;, 2-dehyd 92.7 0.1 3.6E-06 49.3 5.0 33 56-88 2-34 (291)
323 3k96_A Glycerol-3-phosphate de 92.7 0.11 3.8E-06 51.1 5.3 36 52-87 27-62 (356)
324 2y0c_A BCEC, UDP-glucose dehyd 92.7 0.098 3.4E-06 53.7 5.1 34 54-87 8-41 (478)
325 4a7p_A UDP-glucose dehydrogena 92.6 0.11 3.8E-06 52.7 5.3 36 53-88 7-42 (446)
326 3hn2_A 2-dehydropantoate 2-red 92.6 0.085 2.9E-06 50.9 4.3 32 55-86 3-34 (312)
327 1lld_A L-lactate dehydrogenase 92.5 0.11 3.9E-06 50.0 5.1 33 55-87 8-42 (319)
328 4g65_A TRK system potassium up 92.5 0.069 2.4E-06 54.6 3.6 34 55-88 4-37 (461)
329 3oj0_A Glutr, glutamyl-tRNA re 92.5 0.065 2.2E-06 45.1 2.9 34 54-87 21-54 (144)
330 3ghy_A Ketopantoate reductase 92.5 0.12 4.1E-06 50.4 5.2 32 55-86 4-35 (335)
331 3l9w_A Glutathione-regulated p 92.5 0.1 3.6E-06 52.4 4.8 34 55-88 5-38 (413)
332 3p2y_A Alanine dehydrogenase/p 92.4 0.1 3.6E-06 51.4 4.5 36 53-88 183-218 (381)
333 2hjr_A Malate dehydrogenase; m 92.3 0.15 5E-06 49.6 5.5 33 55-87 15-48 (328)
334 2dpo_A L-gulonate 3-dehydrogen 92.2 0.12 4.2E-06 49.9 4.8 34 55-88 7-40 (319)
335 3eag_A UDP-N-acetylmuramate:L- 92.1 0.16 5.4E-06 49.3 5.4 34 55-88 5-39 (326)
336 3gg2_A Sugar dehydrogenase, UD 92.0 0.14 4.6E-06 52.2 5.1 33 55-87 3-35 (450)
337 2ew2_A 2-dehydropantoate 2-red 92.0 0.14 4.7E-06 49.1 4.9 33 55-87 4-36 (316)
338 1y6j_A L-lactate dehydrogenase 91.9 0.16 5.5E-06 49.1 5.2 35 53-87 6-42 (318)
339 2ewd_A Lactate dehydrogenase,; 91.8 0.15 5.3E-06 49.2 5.0 33 55-87 5-38 (317)
340 1t2d_A LDH-P, L-lactate dehydr 91.6 0.2 6.9E-06 48.5 5.6 33 55-87 5-38 (322)
341 3doj_A AT3G25530, dehydrogenas 91.6 0.18 6.1E-06 48.5 5.2 34 55-88 22-55 (310)
342 3g17_A Similar to 2-dehydropan 91.6 0.12 4E-06 49.4 3.9 33 55-87 3-35 (294)
343 3g79_A NDP-N-acetyl-D-galactos 91.6 0.16 5.4E-06 52.0 4.9 34 55-88 19-54 (478)
344 1l7d_A Nicotinamide nucleotide 91.6 0.19 6.5E-06 50.0 5.5 35 54-88 172-206 (384)
345 2v6b_A L-LDH, L-lactate dehydr 91.5 0.16 5.5E-06 48.7 4.8 32 56-87 2-35 (304)
346 3pqe_A L-LDH, L-lactate dehydr 91.5 0.17 5.7E-06 49.1 4.9 34 53-86 4-39 (326)
347 1x13_A NAD(P) transhydrogenase 91.5 0.18 6E-06 50.5 5.1 34 54-87 172-205 (401)
348 3k6j_A Protein F01G10.3, confi 91.5 0.23 7.7E-06 50.4 5.9 34 55-88 55-88 (460)
349 1pjc_A Protein (L-alanine dehy 91.4 0.17 5.7E-06 49.9 4.9 33 55-87 168-200 (361)
350 1bg6_A N-(1-D-carboxylethyl)-L 91.3 0.18 6.2E-06 49.3 5.1 33 55-87 5-37 (359)
351 2a9f_A Putative malic enzyme ( 91.3 0.17 5.9E-06 49.8 4.7 35 52-86 186-221 (398)
352 1zcj_A Peroxisomal bifunctiona 91.2 0.24 8.3E-06 50.5 6.0 33 55-87 38-70 (463)
353 3rui_A Ubiquitin-like modifier 91.2 0.25 8.6E-06 47.9 5.8 35 54-88 34-69 (340)
354 3g0o_A 3-hydroxyisobutyrate de 91.2 0.2 6.9E-06 47.9 5.1 34 54-87 7-40 (303)
355 2qyt_A 2-dehydropantoate 2-red 91.2 0.12 4E-06 49.7 3.4 31 55-85 9-45 (317)
356 3h8v_A Ubiquitin-like modifier 91.1 0.16 5.3E-06 48.4 4.1 36 53-88 35-71 (292)
357 3qha_A Putative oxidoreductase 91.1 0.18 6.2E-06 48.1 4.7 35 54-88 15-49 (296)
358 3vtf_A UDP-glucose 6-dehydroge 91.1 0.18 6.2E-06 50.8 4.8 35 53-87 20-54 (444)
359 4ap3_A Steroid monooxygenase; 91.1 0.15 5.1E-06 53.4 4.3 36 53-88 190-225 (549)
360 3gvi_A Malate dehydrogenase; N 91.0 0.24 8.3E-06 47.9 5.5 34 54-87 7-41 (324)
361 1z82_A Glycerol-3-phosphate de 91.0 0.21 7.2E-06 48.5 5.1 35 53-87 13-47 (335)
362 3pef_A 6-phosphogluconate dehy 90.7 0.22 7.5E-06 47.2 4.8 33 56-88 3-35 (287)
363 2aef_A Calcium-gated potassium 90.7 0.12 4E-06 47.4 2.7 33 54-87 9-41 (234)
364 3pid_A UDP-glucose 6-dehydroge 90.6 0.22 7.6E-06 50.1 4.9 33 54-87 36-68 (432)
365 3hwr_A 2-dehydropantoate 2-red 90.6 0.22 7.7E-06 48.0 4.8 34 53-87 18-51 (318)
366 3dtt_A NADP oxidoreductase; st 90.6 0.27 9.2E-06 45.5 5.2 37 52-88 17-53 (245)
367 3ego_A Probable 2-dehydropanto 90.6 0.23 8E-06 47.6 4.9 32 55-87 3-34 (307)
368 1guz_A Malate dehydrogenase; o 90.6 0.24 8.2E-06 47.6 5.0 32 56-87 2-35 (310)
369 2vns_A Metalloreductase steap3 90.6 0.28 9.5E-06 44.4 5.2 33 55-87 29-61 (215)
370 1zej_A HBD-9, 3-hydroxyacyl-CO 90.5 0.25 8.4E-06 47.1 4.9 34 53-87 11-44 (293)
371 3mog_A Probable 3-hydroxybutyr 90.5 0.25 8.6E-06 50.6 5.3 34 55-88 6-39 (483)
372 1mv8_A GMD, GDP-mannose 6-dehy 90.5 0.18 6E-06 51.1 4.1 32 56-87 2-33 (436)
373 1vl6_A Malate oxidoreductase; 90.5 0.23 7.9E-06 48.9 4.7 35 52-86 190-225 (388)
374 1zud_1 Adenylyltransferase THI 90.4 0.22 7.4E-06 46.4 4.4 35 54-88 28-63 (251)
375 2uyy_A N-PAC protein; long-cha 90.4 0.3 1E-05 46.9 5.6 34 54-87 30-63 (316)
376 1ur5_A Malate dehydrogenase; o 90.4 0.28 9.7E-06 47.1 5.3 33 55-87 3-36 (309)
377 3p7m_A Malate dehydrogenase; p 90.3 0.33 1.1E-05 46.9 5.6 34 54-87 5-39 (321)
378 4huj_A Uncharacterized protein 90.2 0.14 4.6E-06 46.7 2.7 33 55-87 24-57 (220)
379 2eez_A Alanine dehydrogenase; 90.2 0.29 9.9E-06 48.3 5.3 34 54-87 166-199 (369)
380 1nyt_A Shikimate 5-dehydrogena 90.2 0.3 1E-05 45.9 5.2 34 54-87 119-152 (271)
381 3phh_A Shikimate dehydrogenase 90.1 0.33 1.1E-05 45.5 5.3 35 54-88 118-152 (269)
382 3hyw_A Sulfide-quinone reducta 90.0 1.5 5E-05 44.1 10.5 53 141-199 203-256 (430)
383 3e8x_A Putative NAD-dependent 90.0 0.3 1E-05 44.5 4.9 36 53-88 20-56 (236)
384 2pv7_A T-protein [includes: ch 90.0 0.41 1.4E-05 45.6 6.1 33 55-87 22-55 (298)
385 3dfu_A Uncharacterized protein 90.0 0.096 3.3E-06 48.0 1.5 33 54-86 6-38 (232)
386 3h5n_A MCCB protein; ubiquitin 89.7 0.27 9.2E-06 48.2 4.6 35 54-88 118-153 (353)
387 1txg_A Glycerol-3-phosphate de 89.5 0.24 8.2E-06 47.9 4.0 30 56-85 2-31 (335)
388 2vhw_A Alanine dehydrogenase; 89.5 0.36 1.2E-05 47.8 5.3 34 54-87 168-201 (377)
389 4ffl_A PYLC; amino acid, biosy 89.4 0.37 1.3E-05 47.2 5.4 35 56-90 3-37 (363)
390 1dlj_A UDP-glucose dehydrogena 89.4 0.28 9.5E-06 49.1 4.5 31 56-87 2-32 (402)
391 2egg_A AROE, shikimate 5-dehyd 89.2 0.37 1.3E-05 46.0 5.1 34 54-87 141-175 (297)
392 4ezb_A Uncharacterized conserv 89.2 0.35 1.2E-05 46.7 4.9 35 54-88 24-59 (317)
393 1jay_A Coenzyme F420H2:NADP+ o 89.2 0.37 1.3E-05 43.2 4.8 32 56-87 2-34 (212)
394 3ggo_A Prephenate dehydrogenas 89.2 0.43 1.5E-05 45.9 5.5 34 54-87 33-68 (314)
395 3pdu_A 3-hydroxyisobutyrate de 89.2 0.22 7.5E-06 47.2 3.4 33 56-88 3-35 (287)
396 3l6d_A Putative oxidoreductase 89.1 0.49 1.7E-05 45.3 5.9 34 54-87 9-42 (306)
397 4dll_A 2-hydroxy-3-oxopropiona 89.1 0.34 1.2E-05 46.8 4.7 34 54-87 31-64 (320)
398 4gsl_A Ubiquitin-like modifier 89.0 0.36 1.2E-05 50.4 5.0 36 53-88 325-361 (615)
399 3gpi_A NAD-dependent epimerase 88.8 0.52 1.8E-05 44.3 5.8 34 55-88 4-37 (286)
400 1evy_A Glycerol-3-phosphate de 88.8 0.25 8.6E-06 48.6 3.6 32 56-87 17-48 (366)
401 3ond_A Adenosylhomocysteinase; 88.6 0.38 1.3E-05 48.9 4.8 35 53-87 264-298 (488)
402 2p4q_A 6-phosphogluconate dehy 88.5 0.46 1.6E-05 48.9 5.5 35 53-87 9-43 (497)
403 1a5z_A L-lactate dehydrogenase 88.5 0.33 1.1E-05 46.9 4.2 32 56-87 2-35 (319)
404 4a9w_A Monooxygenase; baeyer-v 88.5 0.36 1.2E-05 46.7 4.5 33 54-87 163-195 (357)
405 3c24_A Putative oxidoreductase 88.5 0.52 1.8E-05 44.5 5.5 33 55-87 12-45 (286)
406 1oju_A MDH, malate dehydrogena 88.5 0.34 1.2E-05 46.1 4.2 32 56-87 2-35 (294)
407 3vh1_A Ubiquitin-like modifier 88.4 0.4 1.4E-05 49.9 4.9 35 54-88 327-362 (598)
408 3ius_A Uncharacterized conserv 88.4 0.46 1.6E-05 44.6 5.1 34 55-88 6-39 (286)
409 3qsg_A NAD-binding phosphogluc 88.4 0.36 1.2E-05 46.4 4.3 33 54-86 24-57 (312)
410 1p77_A Shikimate 5-dehydrogena 88.3 0.37 1.3E-05 45.3 4.3 34 54-87 119-152 (272)
411 4gx0_A TRKA domain protein; me 88.3 0.44 1.5E-05 49.9 5.3 35 55-89 349-383 (565)
412 3u62_A Shikimate dehydrogenase 88.2 0.53 1.8E-05 43.7 5.2 34 53-87 108-142 (253)
413 2f1k_A Prephenate dehydrogenas 88.2 0.44 1.5E-05 44.8 4.8 32 56-87 2-33 (279)
414 1vpd_A Tartronate semialdehyde 88.2 0.37 1.3E-05 45.8 4.3 33 55-87 6-38 (299)
415 1pjq_A CYSG, siroheme synthase 88.2 0.41 1.4E-05 48.7 4.8 33 54-86 12-44 (457)
416 4e21_A 6-phosphogluconate dehy 88.2 0.47 1.6E-05 46.6 5.1 34 54-87 22-55 (358)
417 3vku_A L-LDH, L-lactate dehydr 88.1 0.44 1.5E-05 46.0 4.8 34 53-86 8-43 (326)
418 3don_A Shikimate dehydrogenase 88.0 0.35 1.2E-05 45.6 3.9 34 54-87 117-151 (277)
419 3d0o_A L-LDH 1, L-lactate dehy 88.0 0.44 1.5E-05 45.9 4.7 34 53-86 5-40 (317)
420 2zyd_A 6-phosphogluconate dehy 88.0 0.42 1.4E-05 48.9 4.8 35 53-87 14-48 (480)
421 2h78_A Hibadh, 3-hydroxyisobut 88.0 0.37 1.3E-05 45.9 4.1 33 55-87 4-36 (302)
422 3tnl_A Shikimate dehydrogenase 88.0 0.54 1.9E-05 45.2 5.3 35 53-87 153-188 (315)
423 3ldh_A Lactate dehydrogenase; 87.9 0.58 2E-05 45.2 5.4 34 54-87 21-56 (330)
424 3jyo_A Quinate/shikimate dehyd 87.9 0.54 1.9E-05 44.5 5.2 35 53-87 126-161 (283)
425 3k7m_X 6-hydroxy-L-nicotine ox 87.8 5.3 0.00018 39.6 12.9 50 142-198 208-258 (431)
426 3orq_A N5-carboxyaminoimidazol 87.8 0.9 3.1E-05 44.8 6.9 38 53-90 11-48 (377)
427 4gwg_A 6-phosphogluconate dehy 87.7 0.52 1.8E-05 48.2 5.2 34 55-88 5-38 (484)
428 2we8_A Xanthine dehydrogenase; 87.6 0.59 2E-05 46.3 5.4 36 53-88 203-238 (386)
429 1hyh_A L-hicdh, L-2-hydroxyiso 87.6 0.41 1.4E-05 45.9 4.1 32 56-87 3-36 (309)
430 3ew7_A LMO0794 protein; Q8Y8U8 87.4 0.6 2E-05 41.7 5.0 32 56-87 2-34 (221)
431 2rcy_A Pyrroline carboxylate r 87.4 0.5 1.7E-05 43.9 4.6 34 55-88 5-42 (262)
432 3orf_A Dihydropteridine reduct 87.3 0.71 2.4E-05 42.6 5.6 36 54-89 22-58 (251)
433 3nep_X Malate dehydrogenase; h 87.3 0.48 1.6E-05 45.6 4.4 32 56-87 2-35 (314)
434 1nvt_A Shikimate 5'-dehydrogen 87.2 0.54 1.9E-05 44.5 4.8 33 54-87 128-160 (287)
435 2i6t_A Ubiquitin-conjugating e 87.2 0.49 1.7E-05 45.3 4.5 34 55-88 15-50 (303)
436 2g5c_A Prephenate dehydrogenas 87.2 0.53 1.8E-05 44.3 4.7 32 56-87 3-36 (281)
437 1hdo_A Biliverdin IX beta redu 87.2 0.73 2.5E-05 40.6 5.4 34 55-88 4-38 (206)
438 3d4o_A Dipicolinate synthase s 87.2 0.65 2.2E-05 44.1 5.3 35 53-87 154-188 (293)
439 3ojo_A CAP5O; rossmann fold, c 87.2 0.42 1.4E-05 48.1 4.1 34 54-87 11-44 (431)
440 2wtb_A MFP2, fatty acid multif 87.0 0.48 1.6E-05 51.2 4.8 34 55-88 313-346 (725)
441 1yj8_A Glycerol-3-phosphate de 87.0 0.39 1.3E-05 47.4 3.8 33 56-88 23-62 (375)
442 2hk9_A Shikimate dehydrogenase 87.0 0.48 1.6E-05 44.6 4.2 34 54-87 129-162 (275)
443 2gf2_A Hibadh, 3-hydroxyisobut 87.0 0.49 1.7E-05 44.8 4.3 32 56-87 2-33 (296)
444 1yqg_A Pyrroline-5-carboxylate 87.0 0.48 1.7E-05 44.0 4.2 32 56-87 2-34 (263)
445 3gvp_A Adenosylhomocysteinase 87.0 0.49 1.7E-05 47.3 4.4 35 53-87 219-253 (435)
446 1tt5_B Ubiquitin-activating en 86.9 0.58 2E-05 47.1 5.0 35 54-88 40-75 (434)
447 2rir_A Dipicolinate synthase, 86.9 0.67 2.3E-05 44.2 5.3 35 53-87 156-190 (300)
448 2o3j_A UDP-glucose 6-dehydroge 86.9 0.44 1.5E-05 48.8 4.2 33 55-87 10-44 (481)
449 3c7a_A Octopine dehydrogenase; 86.8 0.43 1.5E-05 47.6 4.0 30 56-85 4-34 (404)
450 1ldn_A L-lactate dehydrogenase 86.8 0.61 2.1E-05 44.9 4.9 34 54-87 6-41 (316)
451 3pwz_A Shikimate dehydrogenase 86.7 0.7 2.4E-05 43.4 5.1 35 53-87 119-154 (272)
452 3fbt_A Chorismate mutase and s 86.7 0.59 2E-05 44.1 4.6 35 53-87 121-156 (282)
453 3ktd_A Prephenate dehydrogenas 86.7 0.72 2.4E-05 44.9 5.3 33 55-87 9-41 (341)
454 3o8q_A Shikimate 5-dehydrogena 86.6 0.73 2.5E-05 43.5 5.2 35 53-87 125-160 (281)
455 3t4e_A Quinate/shikimate dehyd 86.6 0.74 2.5E-05 44.2 5.3 35 53-87 147-182 (312)
456 2pgd_A 6-phosphogluconate dehy 86.5 0.6 2.1E-05 47.8 5.0 33 55-87 3-35 (482)
457 3tri_A Pyrroline-5-carboxylate 86.5 0.75 2.6E-05 43.4 5.3 33 55-87 4-39 (280)
458 3h2s_A Putative NADH-flavin re 86.5 0.68 2.3E-05 41.5 4.9 32 56-87 2-34 (224)
459 1x0v_A GPD-C, GPDH-C, glycerol 86.5 0.33 1.1E-05 47.4 2.9 34 55-88 9-49 (354)
460 2cvz_A Dehydrogenase, 3-hydrox 86.5 0.5 1.7E-05 44.6 4.1 31 56-87 3-33 (289)
461 3ce6_A Adenosylhomocysteinase; 86.5 0.52 1.8E-05 48.3 4.4 35 53-87 273-307 (494)
462 4aj2_A L-lactate dehydrogenase 86.4 0.74 2.5E-05 44.6 5.3 34 53-86 18-53 (331)
463 3cky_A 2-hydroxymethyl glutara 86.3 0.59 2E-05 44.4 4.5 33 55-87 5-37 (301)
464 2d5c_A AROE, shikimate 5-dehyd 86.3 0.74 2.5E-05 42.9 5.1 34 53-87 116-149 (263)
465 1y8q_A Ubiquitin-like 1 activa 86.3 0.74 2.5E-05 44.9 5.2 35 54-88 36-71 (346)
466 4id9_A Short-chain dehydrogena 86.1 0.75 2.6E-05 44.5 5.2 37 52-88 17-54 (347)
467 1np3_A Ketol-acid reductoisome 86.1 0.73 2.5E-05 44.8 5.1 33 55-87 17-49 (338)
468 3q2o_A Phosphoribosylaminoimid 86.1 1.1 3.9E-05 44.2 6.6 37 53-89 13-49 (389)
469 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.9 0.67 2.3E-05 47.4 4.9 32 56-87 3-34 (478)
470 2pzm_A Putative nucleotide sug 85.8 1.1 3.7E-05 43.1 6.2 34 55-88 21-55 (330)
471 2izz_A Pyrroline-5-carboxylate 85.7 0.75 2.6E-05 44.3 5.0 33 55-87 23-59 (322)
472 1lu9_A Methylene tetrahydromet 85.6 0.89 3E-05 43.0 5.3 34 54-87 119-153 (287)
473 3gt0_A Pyrroline-5-carboxylate 85.5 0.89 3.1E-05 41.8 5.2 33 55-87 3-39 (247)
474 2ahr_A Putative pyrroline carb 85.4 0.83 2.9E-05 42.3 5.0 33 55-87 4-36 (259)
475 1edz_A 5,10-methylenetetrahydr 85.3 0.72 2.5E-05 44.3 4.5 35 52-86 175-210 (320)
476 2iz1_A 6-phosphogluconate dehy 85.2 0.82 2.8E-05 46.7 5.2 33 55-87 6-38 (474)
477 2zqz_A L-LDH, L-lactate dehydr 85.2 0.83 2.8E-05 44.2 4.9 34 53-86 8-43 (326)
478 2q3e_A UDP-glucose 6-dehydroge 85.2 0.49 1.7E-05 48.3 3.5 33 55-87 6-40 (467)
479 2d4a_B Malate dehydrogenase; a 85.1 0.74 2.5E-05 44.1 4.5 32 56-87 1-33 (308)
480 4gbj_A 6-phosphogluconate dehy 85.0 0.6 2E-05 44.5 3.8 35 55-89 6-40 (297)
481 3d1l_A Putative NADP oxidoredu 84.9 0.72 2.5E-05 42.9 4.3 33 55-87 11-44 (266)
482 1wdk_A Fatty oxidation complex 84.9 0.61 2.1E-05 50.3 4.2 33 55-87 315-347 (715)
483 4b4o_A Epimerase family protei 84.8 0.99 3.4E-05 42.6 5.3 34 56-89 2-36 (298)
484 2qrj_A Saccharopine dehydrogen 84.7 0.75 2.6E-05 45.4 4.4 35 53-87 213-251 (394)
485 1gpj_A Glutamyl-tRNA reductase 84.7 0.77 2.6E-05 45.8 4.6 35 53-87 166-201 (404)
486 3o38_A Short chain dehydrogena 84.7 0.94 3.2E-05 42.0 5.0 35 53-87 21-57 (266)
487 1n4w_A CHOD, cholesterol oxida 84.7 1.2 4.2E-05 45.8 6.3 35 53-87 4-38 (504)
488 3fi9_A Malate dehydrogenase; s 84.7 0.95 3.2E-05 44.0 5.1 34 54-87 8-44 (343)
489 1npy_A Hypothetical shikimate 84.5 0.77 2.6E-05 43.1 4.2 34 54-87 119-153 (271)
490 1b8p_A Protein (malate dehydro 84.4 0.66 2.3E-05 44.9 3.9 33 54-86 5-45 (329)
491 4e4t_A Phosphoribosylaminoimid 84.3 1.1 3.9E-05 44.8 5.7 37 52-88 33-69 (419)
492 2dkn_A 3-alpha-hydroxysteroid 84.2 1.1 3.8E-05 40.9 5.2 33 56-88 3-36 (255)
493 3on5_A BH1974 protein; structu 84.2 0.52 1.8E-05 46.1 3.0 36 53-88 198-233 (362)
494 3p1w_A Rabgdi protein; GDI RAB 84.1 1.4 4.8E-05 44.9 6.3 40 52-91 18-57 (475)
495 1ez4_A Lactate dehydrogenase; 84.1 0.85 2.9E-05 43.9 4.5 33 54-86 5-39 (318)
496 1leh_A Leucine dehydrogenase; 84.1 1.1 3.6E-05 44.1 5.2 34 53-86 172-205 (364)
497 3k5i_A Phosphoribosyl-aminoimi 83.9 1.1 3.6E-05 44.8 5.2 34 54-88 24-57 (403)
498 1y8q_B Anthracycline-, ubiquit 83.5 0.86 2.9E-05 48.0 4.5 35 54-88 17-52 (640)
499 3two_A Mannitol dehydrogenase; 83.5 1.3 4.4E-05 43.1 5.5 35 53-87 176-210 (348)
500 2dvm_A Malic enzyme, 439AA lon 83.5 1 3.5E-05 45.2 4.9 31 54-84 186-219 (439)
No 1
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=100.00 E-value=2.8e-45 Score=389.74 Aligned_cols=390 Identities=19% Similarity=0.194 Sum_probs=266.4
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc---------ccchhhhcccc------c-----cceEE-
Q 010765 51 NGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR---------IVDCVEEIDAQ------Q-----VLGYA- 109 (502)
Q Consensus 51 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r---------~~~~l~~l~~~------~-----~~g~~- 109 (502)
.+.++||+||||||+||++|+.|+++|++|+||||++..... ..++++.++.. . ...+.
T Consensus 2 ~~~~~dVlIVGaG~aGl~~A~~La~~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 81 (535)
T 3ihg_A 2 NDHEVDVLVVGAGLGGLSTAMFLARQGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVI 81 (535)
T ss_dssp CCCSEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEE
T ss_pred CCccCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceee
Confidence 345789999999999999999999999999999999754321 11444433221 0 00111
Q ss_pred -EEE--CCce-eee--eccCc----CCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC----eEEEE
Q 010765 110 -LFK--DGKS-TRL--SYPLE----KFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG----TIKGV 174 (502)
Q Consensus 110 -~~~--~g~~-~~~--~~~~~----~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~----~v~~v 174 (502)
... .+.. ..+ .++.. ....+...+.++|..|++.|.+.+++. |+++++++ |++++++++ ++. +
T Consensus 82 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~~~v~-v 159 (535)
T 3ihg_A 82 RLAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKH-GGAIRFGTRLLSFRQHDDDAGAGVT-A 159 (535)
T ss_dssp EEESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEECGGGCSEEE-E
T ss_pred eEEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEECCCCccccEE-E
Confidence 111 1111 101 11100 001122356899999999999999998 89999998 999998876 553 5
Q ss_pred EEEeCCCcEEEEecCEEEEecCCCchhhhhhcCCCCCCcc--ceeEEEEeecCCCC----CCceEEE-EcCCCcEEEEec
Q 010765 175 QYKTKDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPS--CFVGLVLENCQLPF----ANHGHVI-LADPSPILFYPI 247 (502)
Q Consensus 175 ~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~~~~~~~~~--~~~~~~~~~~~~~~----~~~~~~~-~~~~~~~~~~p~ 247 (502)
++.+.+| ..+++||+||+|||.+|.+|+.++++..+... .+..+.+. .+++. .....++ ..+.++.+++|+
T Consensus 160 ~~~~~~~-~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~p~ 237 (535)
T 3ihg_A 160 RLAGPDG-EYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFD-ADLSGIMEPGTTGWYYLHHPEFKGTFGPT 237 (535)
T ss_dssp EEEETTE-EEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEE-CCGGGTSCTTCCEEEEEECSSCEEEEEEC
T ss_pred EEEcCCC-eEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEe-ccChhhccCCceEEEEEECCCceEEEEEe
Confidence 5555555 45688999999999999999999886644332 23333332 23332 1222333 345567888899
Q ss_pred CC-CeEEEEEEeCCC---CCCCCCchHHHHHHHHHcC-CCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEe
Q 010765 248 SS-TEVRCLVDVPGQ---KVPSISNGEMANYLKAMVA-PQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMG 322 (502)
Q Consensus 248 ~~-~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvG 322 (502)
.+ +.+.+.+..+.+ ..+.++.+++.+.+++.+. +..+.++ .....|++....+++|..|||+|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~~~grv~LvG 307 (535)
T 3ihg_A 238 DRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKPEL----------VDIQGWEMAARIAERWREGRVFLAG 307 (535)
T ss_dssp SSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCCEE----------EEEEEEEEEEEEESCSEETTEEECT
T ss_pred cCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCceeE----------EEeeEeeeeEEEECccccCCEEEEe
Confidence 87 444444444432 2334566777777777665 2222221 1345667777778899999999999
Q ss_pred CCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHH
Q 010765 323 DAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEM 402 (502)
Q Consensus 323 DAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~l 402 (502)
||||.++|++|||||+||+||.+|+|+|+.+. ++.+.+.+|++|+++|+|++..++..|..+++.+... +......
T Consensus 308 DAAH~~~P~~GqG~n~ai~DA~~La~~La~~l---~g~~~~~lL~~Ye~eR~p~a~~~~~~s~~~~~~~~~~-~~~~~~~ 383 (535)
T 3ihg_A 308 DAAKVTPPTGGMSGNAAVADGFDLAWKLAAVL---QGQAGAGLLDTYEDERKVAAELVVAEALAIYAQRMAP-HMAEVWD 383 (535)
T ss_dssp TTTEECCSTTSCHHHHHHHHHHHHHHHHHHHH---TTSSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCG-GGTTTSC
T ss_pred cccccCCCccCCccccccccHHHHHHHHHHHh---cCCCcHHHHHhhHHHHHHHHHHHHHHHHHhhHhhccc-ccCcccc
Confidence 99999999999999999999999999998763 2233467999999999999999999998888765432 1110001
Q ss_pred HHHHhhhhhcCCCCchhHHHHhc----------cCCCChHHHHHHHHH---------HHHHHHhhhccCCCChHH
Q 010765 403 RQACFDYLSLGGVFSTGPVALLS----------GLNPRPLSLVLHFFA---------VAIYGVGRLLLPFPSPKR 458 (502)
Q Consensus 403 r~~~~~~~~~g~~~~~~~~~~~~----------~~~~~P~~~~~h~~~---------~~l~~~~~~~~~~~~~~~ 458 (502)
+......+.+|++|.++++.... ..+++||.|+||.|+ +|++|.+|+|++++....
T Consensus 384 ~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~pG~r~p~~~l~~~~~~~~~~dl~g~~f~ll~~~~~~~ 458 (535)
T 3ihg_A 384 KSVGYPETLLGFRYRSSAVLATDDDPARVENPLTPSGRPGFRGPHVLVSRHGERLSTVDLFGDGWTLLAGELGAD 458 (535)
T ss_dssp CCCCHHHHHTSBCCCSTTCCCSCCCCCSBCCTTSCCCCTTSBCCCCEEEETTEEEEGGGGCSSSEEEEECTTCHH
T ss_pred cccccceeeeCcccCCCceecCCCCCCcccccCCCCCCCCCcCCCceeecCCceeeHHHhcCCceEEEecCCccH
Confidence 12233467899999999885322 236899999999987 899999999999875543
No 2
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=100.00 E-value=3.8e-43 Score=369.10 Aligned_cols=377 Identities=19% Similarity=0.194 Sum_probs=258.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC--cc-------cchhhhccccc-cc---eE-EEEECCcee
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD--RI-------VDCVEEIDAQQ-VL---GY-ALFKDGKST 117 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~--r~-------~~~l~~l~~~~-~~---g~-~~~~~g~~~ 117 (502)
++++||+||||||+||++|+.|+++|++|+|+||++.+.. +. .++++.++... +. .. .....+.
T Consensus 9 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~-- 86 (500)
T 2qa1_A 9 RSDAAVIVVGAGPAGMMLAGELRLAGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGGL-- 86 (500)
T ss_dssp CSBCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETTE--
T ss_pred cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccce--
Confidence 5678999999999999999999999999999999866432 11 13443332210 00 00 0111111
Q ss_pred eeeccCcCCC-CCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEec
Q 010765 118 RLSYPLEKFH-ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 195 (502)
Q Consensus 118 ~~~~~~~~~~-~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~AD 195 (502)
.+.+. ... ..+.++.++|..+++.|.+.+.+. |+++++++ |+++.++++++. |++.+.+| +.+++||+||+||
T Consensus 87 ~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~vVgAD 161 (500)
T 2qa1_A 87 PIDFG--VLEGAWQAAKTVPQSVTETHLEQWATGL-GADIRRGHEVLSLTDDGAGVT-VEVRGPEG-KHTLRAAYLVGCD 161 (500)
T ss_dssp EEEGG--GSTTGGGCEEEEEHHHHHHHHHHHHHHT-TCEEEETCEEEEEEEETTEEE-EEEEETTE-EEEEEESEEEECC
T ss_pred ecccc--cCCCCCCceeecCHHHHHHHHHHHHHHC-CCEEECCcEEEEEEEcCCeEE-EEEEcCCC-CEEEEeCEEEECC
Confidence 12211 111 123457899999999999999998 79999998 999999888654 55555555 4568899999999
Q ss_pred CCCchhhhhhcCCCCCCccceeEEEEeecCCCC-CCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCC----CCCCCchH
Q 010765 196 GCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK----VPSISNGE 270 (502)
Q Consensus 196 G~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~ 270 (502)
|.+|.||+.++++.++....+.++... ...+. +....+++.+.++++++|.+++..++.+..+... ....+.++
T Consensus 162 G~~S~VR~~lg~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~p~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 240 (500)
T 2qa1_A 162 GGRSSVRKAAGFDFPGTAATMEMYLAD-IKGVELQPRMIGETLPGGMVMVGPLPGGITRIIVCERGTPPQRRETPPSWHE 240 (500)
T ss_dssp CTTCHHHHHTTCCCCEECCCCEEEEEE-EESCCCCCEEEEEEETTEEEEEEEETTTEEEEEEEETTCCC-----CCCHHH
T ss_pred CcchHHHHHcCCCcCCCccceEEEEEE-EEeCCCCCceEEEECCCcEEEEEEcCCCEEEEEEEcCCCCCccccCCCCHHH
Confidence 999999999998765544434444332 22221 2223445667788999999988777766543221 12345566
Q ss_pred HHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhc
Q 010765 271 MANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 350 (502)
Q Consensus 271 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L 350 (502)
+.+.+++.+.+.+.. .+......|+.....+++|..|||+|+|||||.++|++|||||+||+||.+|+|+|
T Consensus 241 ~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~L 311 (500)
T 2qa1_A 241 VADAWKRLTGDDIAH---------AEPVWVSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDAVNLGWKL 311 (500)
T ss_dssp HHHHHHHHHSCCCTT---------SEEEEEEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCCCc---------cceeEEEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHHHHHHHHH
Confidence 777776655433211 01112345666667788999999999999999999999999999999999999999
Q ss_pred CccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHHHHHHhhh--------------hhcCCCC
Q 010765 351 KPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDY--------------LSLGGVF 416 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~--------------~~~g~~~ 416 (502)
+.+. ++.+.+.+|++|+++|+|++..++..++.+.+++... +....+|+..... ..++.+|
T Consensus 312 a~~~---~g~~~~~~L~~Y~~eR~~~~~~~~~~s~~~~~l~~~~--~~~~~~R~~~~~~~~~~~~~~~~~~~~~g~~~~Y 386 (500)
T 2qa1_A 312 GAVV---NGTATEELLDSYHSERHAVGKRLLMNTQAQGLLFLSG--PEVQPLRDVLTELIQYGEVARHLAGMVSGLEITY 386 (500)
T ss_dssp HHHH---TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC--GGGHHHHHHHHHHHTSHHHHHHHHHHHHSTTCCC
T ss_pred HHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--chHHHHHHHHHHhhcCHHHHHHHhhhhccCCCcc
Confidence 8754 2334578999999999999999999998888887642 3334455443221 2245566
Q ss_pred chhHHHHhccCCCChHHHHHHHHH---------HHHHH-HhhhccCCCC
Q 010765 417 STGPVALLSGLNPRPLSLVLHFFA---------VAIYG-VGRLLLPFPS 455 (502)
Q Consensus 417 ~~~~~~~~~~~~~~P~~~~~h~~~---------~~l~~-~~~~~~~~~~ 455 (502)
..+. +..+.||.|+||+|+ .|+++ ..|+|+.++.
T Consensus 387 ~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 430 (500)
T 2qa1_A 387 DVGT-----GSHPLLGKRMPALELTTATRETSSTELLHTARGVLLDLAD 430 (500)
T ss_dssp CCCC-----CSCTTTTSBCCCCEEECSSCEEEHHHHTTTCCEEEEETTC
T ss_pred CCCC-----CcCCcCCCCCCCCeeecCCCcEeHHHHhCCCeEEEEEeCC
Confidence 5431 235678999999875 78884 4588887754
No 3
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=100.00 E-value=4e-43 Score=368.84 Aligned_cols=377 Identities=18% Similarity=0.170 Sum_probs=258.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC--c-------ccchhhhccccc-c---ceE-EEEECCcee
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD--R-------IVDCVEEIDAQQ-V---LGY-ALFKDGKST 117 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~--r-------~~~~l~~l~~~~-~---~g~-~~~~~g~~~ 117 (502)
+.++||+||||||+||++|+.|+++|++|+||||++.+.. + ..++++.++... + ... .....+.
T Consensus 10 ~~~~dVlIVGaGpaGl~~A~~La~~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~-- 87 (499)
T 2qa2_A 10 RSDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQGHFGGR-- 87 (499)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESEEEETTE--
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhccccccceecce--
Confidence 5678999999999999999999999999999999866532 1 113444332210 0 000 0111111
Q ss_pred eeeccCcCCC-CCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEec
Q 010765 118 RLSYPLEKFH-ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCD 195 (502)
Q Consensus 118 ~~~~~~~~~~-~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~AD 195 (502)
.+.+. ... ..+.++.++|..+++.|.+.+.+. |+++++++ |+++.++++++. |++.+.+| +.+++||+||+||
T Consensus 88 ~~~~~--~~~~~~~~~~~i~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~v~-v~~~~~~g-~~~~~a~~vVgAD 162 (499)
T 2qa2_A 88 PVDFG--VLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVV-VEVEGPDG-PRSLTTRYVVGCD 162 (499)
T ss_dssp EEEGG--GSTTCCCEEEEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEEECSSCEE-EEEECSSC-EEEEEEEEEEECC
T ss_pred ecccc--cCCCCCCceEecCHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCC-cEEEEeCEEEEcc
Confidence 12211 111 223457899999999999999988 79999997 999998877654 55554445 4568899999999
Q ss_pred CCCchhhhhhcCCCCCCccceeEEEEeecCCCC-CCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCC----CCCCCchH
Q 010765 196 GCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK----VPSISNGE 270 (502)
Q Consensus 196 G~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~----~~~~~~~~ 270 (502)
|.+|.||+.++++.++....+.++... ...+. +....+++.+.++++++|.+++..++.+..+... ....+.++
T Consensus 163 G~~S~VR~~lg~~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~g~~~~~P~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 241 (499)
T 2qa2_A 163 GGRSTVRKAAGFDFPGTSASREMFLAD-IRGCEITPRPIGETVPLGMVMSAPLGDGVDRIIVCERGAPARRRTGPPPYQE 241 (499)
T ss_dssp CTTCHHHHHTTCCCCEECCCCCEEEEE-EESCCCCCEEEEEEETTEEEEEEECSSSCEEEEEEETTCCCCCCSSSCCHHH
T ss_pred CcccHHHHHcCCCCCCCCCccEEEEEE-EEECCCCcceEEEECCCeEEEEEEcCCCEEEEEEEecCCCCccccCCCCHHH
Confidence 999999999998765544333344332 11221 2223445667788899999988777776653221 12345667
Q ss_pred HHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhc
Q 010765 271 MANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 350 (502)
Q Consensus 271 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L 350 (502)
+.+.+++.+.+.+.. .+......|+.....+++|..|||+|+|||||.++|++|||||+||+||.+|+|+|
T Consensus 242 ~~~~l~~~~~~~~~~---------~~~~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA~~La~~L 312 (499)
T 2qa2_A 242 VAAAWQRLTGQDISH---------GEPVWVSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQDSVNLGWKL 312 (499)
T ss_dssp HHHHHHHHHSCCCTT---------CEEEEEEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCc---------cceeEEEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHHHHHHHHHH
Confidence 777777665433211 01112345666667788999999999999999999999999999999999999999
Q ss_pred CccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHHHHHHhhh--------------hhcCCCC
Q 010765 351 KPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDY--------------LSLGGVF 416 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~--------------~~~g~~~ 416 (502)
+.+. .+.+.+.+|++|+++|+|++..++..++.+..++.. ++....+|+..... ..++.+|
T Consensus 313 a~~l---~g~~~~~~L~~Ye~eR~~~~~~~~~~s~~~~~l~~~--~~~~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~Y 387 (499)
T 2qa2_A 313 AAVV---SGRAPAGLLDTYHEERHPVGRRLLMNTQAQGMLFLS--GDEMQPLRDVLSELIRYDEVSRHLAGMVSGLDIRY 387 (499)
T ss_dssp HHHH---TTSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--CGGGHHHHHHHHHHHTSSHHHHHHHHHHHTTTCCC
T ss_pred HHHH---cCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CchHHHHHHHHHHhhcCHHHHHHHHHHHhCCCCcc
Confidence 8754 223346799999999999999999999888888764 23344555543322 2245555
Q ss_pred chhHHHHhccCCCChHHHHHHHHH---------HHHHH-HhhhccCCCC
Q 010765 417 STGPVALLSGLNPRPLSLVLHFFA---------VAIYG-VGRLLLPFPS 455 (502)
Q Consensus 417 ~~~~~~~~~~~~~~P~~~~~h~~~---------~~l~~-~~~~~~~~~~ 455 (502)
.++. +..+.||.|+||+|+ .|+++ ..|+|+.++.
T Consensus 388 ~~~~-----~~~~~~G~r~p~~~l~~~~~~~~l~d~~~~~~~~ll~~~~ 431 (499)
T 2qa2_A 388 EVDG-----GDHPLLGMRMPHQELVRAHGKTSTTELLHPARGVLLDIAD 431 (499)
T ss_dssp CCCS-----CSCTTTTSBCCCCEEECSSSEEETTGGGTTCSEEEEECSC
T ss_pred CCCC-----CCCCCCCCCCCCCeeecCCCceeHHHHhcCCeEEEEEecC
Confidence 5431 235678999999875 67774 4588887654
No 4
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=100.00 E-value=9.1e-43 Score=370.72 Aligned_cols=384 Identities=18% Similarity=0.153 Sum_probs=250.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc---------ccchhhhccc------c--ccc---eEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR---------IVDCVEEIDA------Q--QVL---GYALF 111 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r---------~~~~l~~l~~------~--~~~---g~~~~ 111 (502)
+.++||+||||||+||++|+.|+++|++|+||||++..... ..++++.++. . ... +....
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 103 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAHRQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAWV 103 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEEe
Confidence 34589999999999999999999999999999998654321 1133433321 1 110 11111
Q ss_pred E--CCce-eeeeccCcC----C-CCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCC
Q 010765 112 K--DGKS-TRLSYPLEK----F-HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDG 181 (502)
Q Consensus 112 ~--~g~~-~~~~~~~~~----~-~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G 181 (502)
. .+.. ..+.++... . ..+..++.++|..+++.|.+.+.+. +++++ |++++++++++. |++.+ .+|
T Consensus 104 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~----v~~~~~v~~~~~~~~~v~-v~~~~~~~G 178 (549)
T 2r0c_A 104 TRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER----LRTRSRLDSFEQRDDHVR-ATITDLRTG 178 (549)
T ss_dssp SSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG----EECSEEEEEEEECSSCEE-EEEEETTTC
T ss_pred ccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh----cccCcEEEEEEEeCCEEE-EEEEECCCC
Confidence 1 1221 122222110 0 1222457899999999999999875 88888 999998887654 55554 347
Q ss_pred cEEEEecCEEEEecCCCchhhhhhcCCCCCCccceeEE--EEeecCCC-----CCCceEEEEcCC-CcEEEEecCCCeEE
Q 010765 182 QELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVGL--VLENCQLP-----FANHGHVILADP-SPILFYPISSTEVR 253 (502)
Q Consensus 182 ~~~~v~ad~vI~ADG~~S~vR~~l~~~~~~~~~~~~~~--~~~~~~~~-----~~~~~~~~~~~~-~~~~~~p~~~~~~~ 253 (502)
+..+++||+||+|||.+|.||+.++++..+.......+ .+...+++ .+...+++..+. ++++++|++++. +
T Consensus 179 ~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~p~~~~~-~ 257 (549)
T 2r0c_A 179 ATRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNILFRAPELRSLLGERAALFFFLMLSSSLRFPLRALDGRG-L 257 (549)
T ss_dssp CEEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEEEEECTTHHHHHGGGCCSEEEEEEETTEEEEEEESSSSS-E
T ss_pred CEEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEEEEECCchHHhcCCCCceEEEEECCCCcEEEEEEECCCc-E
Confidence 66678899999999999999999998765544322222 22211111 111223334455 578899997643 3
Q ss_pred EEEEeCCCCCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCc
Q 010765 254 CLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTG 333 (502)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G 333 (502)
|.+.++.+... .+.+++.+.+++.+.+.++.++ .+...|+.....+++|..|||+|+|||||.++|++|
T Consensus 258 ~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~~~~~----------~~~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~G 326 (549)
T 2r0c_A 258 YRLTVGVDDAS-KSTMDSFELVRRAVAFDTEIEV----------LSDSEWHLTHRVADSFSAGRVFLTGDAAHTLSPSGG 326 (549)
T ss_dssp EEEEEECSTTC-CSCCCHHHHHHHHBCSCCCCEE----------EEEEEEEECCEECSCSEETTEEECGGGTEECCCGGG
T ss_pred EEEEecCCCCC-CCHHHHHHHHHHHhCCCCceeE----------EEEecchhHhhhHHhhcCCcEEEEccccccCCCccC
Confidence 44444322212 5566778888877664332111 123456666677889999999999999999999999
Q ss_pred hhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccC--------ChhHHHHHHHH
Q 010765 334 GGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSS--------PDQARKEMRQA 405 (502)
Q Consensus 334 ~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~--------~~~~~~~lr~~ 405 (502)
||||+||+||.+|+|+|+.+. ++.+.+.+|++|+++|+|++..++..+..+.+++... .++....+|+.
T Consensus 327 qG~n~gi~DA~~La~~La~~l---~g~a~~~lL~~Y~~eR~~~a~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~R~~ 403 (549)
T 2r0c_A 327 FGMNTGIGSAADLGWKLAATL---RGWAGPGLLATYEEERRPVAITSLEEANVNLRRTMDRELPPGLHDDGPRGERIRAA 403 (549)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH---HTCSCTTTTHHHHHHHHHHHHHHHHC----------CCCCTTTTCCSHHHHHHHHH
T ss_pred CccccccHHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccCcchHHHHHH
Confidence 999999999999999998753 1223456899999999999999999998888777531 23445667766
Q ss_pred Hhhhh--------------hcCCCCchhHHHHhc---------cCCCChHHHHHHHHH------HHHHHHhhhccCCCC
Q 010765 406 CFDYL--------------SLGGVFSTGPVALLS---------GLNPRPLSLVLHFFA------VAIYGVGRLLLPFPS 455 (502)
Q Consensus 406 ~~~~~--------------~~g~~~~~~~~~~~~---------~~~~~P~~~~~h~~~------~~l~~~~~~~~~~~~ 455 (502)
+.+++ .++.+|.++++..-+ ...+.||.|+||+|+ .|+++.+|+|+.++.
T Consensus 404 ~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~l~~~~~~~~~~~~~~~~~~~G~r~p~~~l~~g~~l~d~~~~~~~ll~~~~ 482 (549)
T 2r0c_A 404 VAEKLERSGARREFDAPGIHFGHTYRSSIVCGEPETEVATGGWRPSARPGARAPHAWLTPTTSTLDLFGRGFVLLSFGT 482 (549)
T ss_dssp HHHHHHHTTGGGGGSCHHHHHCCCCCSTTSCCC---------CCCCCCTTSBCCCCBSSSSCBGGGGCSSSEEEEEESC
T ss_pred HHHHHHhhcccccccccceEeccEeCCccccCCCCCCccccccCCCCCCCCcCCCcEeCCCcCHHHHcCCceEEEEcCC
Confidence 55443 346778776553110 013688999999875 688888899887643
No 5
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=100.00 E-value=3.4e-41 Score=365.10 Aligned_cols=375 Identities=17% Similarity=0.201 Sum_probs=248.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-----CCCeEEEEecCCCCCC--c-------ccchhhhcccc--------ccceEEEE
Q 010765 54 PTDVIIVGAGVAGAALAHTLGK-----DGRRVHVIERDVTEPD--R-------IVDCVEEIDAQ--------QVLGYALF 111 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~-----~G~~v~lvEr~~~~~~--r-------~~~~l~~l~~~--------~~~g~~~~ 111 (502)
++||+||||||+||++|+.|++ .|++|+||||++.+.. + +.++++.++.. ....+.++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 5799999999999999999999 9999999999865421 2 22445444321 23344455
Q ss_pred ECCc---eee-eeccCcC-CCCCCcceeecchHHHHHHHHHHHcCC--CeEEEece-EEEEEeeC--------CeEEEEE
Q 010765 112 KDGK---STR-LSYPLEK-FHADVSGRSFHNGRFIQRMREKAASLP--NVRLEQGT-VTSLLEEN--------GTIKGVQ 175 (502)
Q Consensus 112 ~~g~---~~~-~~~~~~~-~~~~~~g~~i~r~~l~~~L~~~a~~~~--~v~i~~~~-v~~~~~~~--------~~v~~v~ 175 (502)
..+. ... ..++... .........++|..+++.|.+.+.+.+ ++++++++ ++++.+++ ..| .|+
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V-~v~ 166 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPV-TMT 166 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCE-EEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCE-EEE
Confidence 4321 111 1111111 112223467999999999999998874 48999998 99998765 233 355
Q ss_pred EEe----------------------------------------CCCcEEEEecCEEEEecCCCchhhhhhcCCCCCCccc
Q 010765 176 YKT----------------------------------------KDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPSC 215 (502)
Q Consensus 176 ~~~----------------------------------------~~G~~~~v~ad~vI~ADG~~S~vR~~l~~~~~~~~~~ 215 (502)
+.+ .+|+..+++|||||||||++|.||+++++...+....
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~ 246 (665)
T 1pn0_A 167 LRYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTD 246 (665)
T ss_dssp EEECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEE
T ss_pred EEecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCcc
Confidence 544 3566567899999999999999999999876544333
Q ss_pred eeEEEEe---ecCCCCCCceEEEE-cCCCcEEEEecCCCeEEEEEEeCCCC-------CCCCCchHHHHHHHHHcCCCCC
Q 010765 216 FVGLVLE---NCQLPFANHGHVIL-ADPSPILFYPISSTEVRCLVDVPGQK-------VPSISNGEMANYLKAMVAPQVP 284 (502)
Q Consensus 216 ~~~~~~~---~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~l~~~~~~~~~ 284 (502)
..+.++. ..+.|.......+. .+.++++++|..++..++++.++... ....+.+++.+.+++.+.+...
T Consensus 247 ~~~~v~d~~~~~~~p~~~~~~~~~~~~~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~~~~~~~~~~~~~~~ 326 (665)
T 1pn0_A 247 YIWGVLDAVPASNFPDIRSRCAIHSAESGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEVVIANAKKIFHPYTF 326 (665)
T ss_dssp EEEEEEEEEEECCCTTTTSEEEEECSSSCEEEEEECSTTCEEEEEEECC----------CCCCHHHHHHHHHHHHTTSCC
T ss_pred EEEEEEEEEECCCCCCcceEEEEEeCCCceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHHHHHHHHHHhCcccC
Confidence 3222221 22344322222233 25688899999988778877765332 1234455666666555543211
Q ss_pred hhhHHHHHHHHhcCCeeeccCCCCCCCCCC-CCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHH
Q 010765 285 PELHEAFVSAVERGNIRTMPNRSMPADPQP-TPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLG 363 (502)
Q Consensus 285 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~ 363 (502)
++ ....++..+++....+++|. .|||+|+|||||.++|++|||||+||+||.+|+|+|+.+. ++.+.+
T Consensus 327 -~~-------~~~~~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl---~g~a~~ 395 (665)
T 1pn0_A 327 -DV-------QQLDWFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVL---TGRAKR 395 (665)
T ss_dssp -EE-------EEEEEEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHH---TTCBCG
T ss_pred -ce-------eeEEEEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHH---cCCCcH
Confidence 11 01112344555566788998 7999999999999999999999999999999999998764 223456
Q ss_pred HHHHHHHHHcccchhHHHHHHHHHHhhhccCCh------------hHHHHHHHHHhhhhhcCCCCchhHHHHh------c
Q 010765 364 RYLESFYTLRKPVASTINTLAGALYKVFSSSPD------------QARKEMRQACFDYLSLGGVFSTGPVALL------S 425 (502)
Q Consensus 364 ~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~------------~~~~~lr~~~~~~~~~g~~~~~~~~~~~------~ 425 (502)
.+|++|+++|+|++..++..+..+.++|...+. .+.+.+++..-....++.+|..+++..- -
T Consensus 396 ~lL~tYe~eR~p~a~~~i~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~~ 475 (665)
T 1pn0_A 396 DILKTYEEERQPFAQALIDFDHQFSRLFSGRPAKDVADEMGVSMDVFKEAFVKGNEFASGTAINYDENLVTDKKSSKQEL 475 (665)
T ss_dssp GGGHHHHHHHHHHHHHHHHHHHHHHHHHHSCBCSSTTCTTSBCHHHHHHHHHHHHHHHTTCCCCCCSBTTBCSTTCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccchhHHHHHHHHHHhhccccccCcccCCCcccCCCcccccc
Confidence 799999999999999999999988888865421 1111222211112357788887765321 0
Q ss_pred cCCCChHHHHHHHHH
Q 010765 426 GLNPRPLSLVLHFFA 440 (502)
Q Consensus 426 ~~~~~P~~~~~h~~~ 440 (502)
....+||.|+||+++
T Consensus 476 ~~~~~~G~r~p~~~~ 490 (665)
T 1pn0_A 476 AKNCVVGTRFKSQPV 490 (665)
T ss_dssp BTTSCTTSBCCCCEE
T ss_pred CCCCCCcCCCCCCeE
Confidence 123579999999875
No 6
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=100.00 E-value=1.4e-39 Score=334.06 Aligned_cols=340 Identities=17% Similarity=0.153 Sum_probs=235.1
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcc---------cchhhhccc------c--ccceEEEEEC
Q 010765 51 NGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI---------VDCVEEIDA------Q--QVLGYALFKD 113 (502)
Q Consensus 51 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~---------~~~l~~l~~------~--~~~g~~~~~~ 113 (502)
...++||+||||||+||++|+.|+++|++|+|+||++...... .+.++.++. . ....+.++..
T Consensus 20 ~~~~~dV~IVGaG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 99 (407)
T 3rp8_A 20 FQGHMKAIVIGAGIGGLSAAVALKQSGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMAYRDF 99 (407)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEEEEET
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceEEEEC
Confidence 3567999999999999999999999999999999997653221 133333322 1 2334444443
Q ss_pred C-ceeeeeccCcCC--CCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecC
Q 010765 114 G-KSTRLSYPLEKF--HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAP 189 (502)
Q Consensus 114 g-~~~~~~~~~~~~--~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad 189 (502)
. ......++.... .....++.++|..|++.|.+.+.+ +++++++ |+++++++++ |.+...+|++ ++||
T Consensus 100 ~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~a~ 171 (407)
T 3rp8_A 100 RSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR---DSVQFGKRVTRCEEDADG---VTVWFTDGSS--ASGD 171 (407)
T ss_dssp TTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG---GGEEESCCEEEEEEETTE---EEEEETTSCE--EEES
T ss_pred CCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc---CEEEECCEEEEEEecCCc---EEEEEcCCCE--EeeC
Confidence 2 222222221110 112346789999999999999876 6788887 9999988874 5566788874 5699
Q ss_pred EEEEecCCCchhhhhh-cCCCCCCccceeEEEEe---ecCCCCCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 010765 190 LTIVCDGCFSNLRRSL-CKPKVDVPSCFVGLVLE---NCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPS 265 (502)
Q Consensus 190 ~vI~ADG~~S~vR~~l-~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 265 (502)
+||+|||.+|.+|+.+ +.........+..+... ....+.......+++++++++++|++++...|.+..+......
T Consensus 172 ~vV~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 251 (407)
T 3rp8_A 172 LLIAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTTFVGEGKQVSLMPVSAGRFYFFFDVPLPAGLA 251 (407)
T ss_dssp EEEECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEEEEETTEEEEEEEETTTEEEEEEEEECCTTCS
T ss_pred EEEECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEEEECCCcEEEEEEcCCCeEEEEEEeCCCcCCC
Confidence 9999999999999999 55422222222222211 1122233445566788889999999999888887765333333
Q ss_pred CCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCC--eeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHH
Q 010765 266 ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGN--IRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDI 343 (502)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da 343 (502)
.+.++..+.+.+.+. .+.+.+.+.+........ ...++... ..+|..+||+|+|||||.++|++|||+|+||+||
T Consensus 252 ~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~rv~LvGDAAh~~~P~~GqG~~~al~da 328 (407)
T 3rp8_A 252 EDRDTLRADLSRYFA-GWAPPVQKLIAALDPQTTNRIEIHDIEP--FSRLVRGRVALLGDAGHSTTPDIGQGGCAAMEDA 328 (407)
T ss_dssp CCTTTHHHHHHHHTT-TCCHHHHHHHHHSCGGGCEEEEEEECCC--CSCCEETTEEECGGGTCCCCGGGSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHhc-CCChHHHHHHHcCCccceeEEeeEecCC--CCceecCCEEEEEcccccCCcchhhhHHHHHHHH
Confidence 344556666666554 455555544322222112 33334332 2788899999999999999999999999999999
Q ss_pred HHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHHHHHHhh
Q 010765 344 VVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFD 408 (502)
Q Consensus 344 ~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~ 408 (502)
..|+++|... + ..+.+|+.|+++|++++..++..++.+.+++... ++....+|+..++
T Consensus 329 ~~La~~L~~~-----~-~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~R~~~l~ 386 (407)
T 3rp8_A 329 VVLGAVFRQT-----R-DIAAALREYEAQRCDRVRDLVLKARKRCDITHGK-DMQLTEAWYQELR 386 (407)
T ss_dssp HHHHHHHHSC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-THHHHHHHHHHHH
T ss_pred HHHHHHHhcC-----C-CHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcC-CHHHHHHHHHHHh
Confidence 9999999853 1 4678999999999999999999999999999765 5567778887765
No 7
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=100.00 E-value=4.4e-40 Score=355.83 Aligned_cols=377 Identities=18% Similarity=0.192 Sum_probs=240.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh-CCCeEEEEecCCCCCC--c-------ccchhhhcccc--------ccceEEEEEC-
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGK-DGRRVHVIERDVTEPD--R-------IVDCVEEIDAQ--------QVLGYALFKD- 113 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~-~G~~v~lvEr~~~~~~--r-------~~~~l~~l~~~--------~~~g~~~~~~- 113 (502)
.++||+||||||+||++|+.|++ .|++|+||||++.+.. + +.++++.++.. ......++..
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 46899999999999999999999 9999999999865432 1 12444444321 1223334431
Q ss_pred ----Cceeee-eccCcC-CCCCCcceeecchHHHHHHHHHHHcCC-CeEEEece-EEEEEeeCC---eEEEEEEEe----
Q 010765 114 ----GKSTRL-SYPLEK-FHADVSGRSFHNGRFIQRMREKAASLP-NVRLEQGT-VTSLLEENG---TIKGVQYKT---- 178 (502)
Q Consensus 114 ----g~~~~~-~~~~~~-~~~~~~g~~i~r~~l~~~L~~~a~~~~-~v~i~~~~-v~~~~~~~~---~v~~v~~~~---- 178 (502)
+..... .++... .........++|..+++.|.+.+++.+ ++++++++ |+++.++++ ..+.|++.+
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 221111 111111 111223467899999999999999985 45999998 999988753 223455554
Q ss_pred CCCcEEEEecCEEEEecCCCchhhhhhcCCCCCCccceeEEEEe---ecCCCCCCceEEEEcCCCcEEEEecCCC-eEEE
Q 010765 179 KDGQELRAYAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLE---NCQLPFANHGHVILADPSPILFYPISST-EVRC 254 (502)
Q Consensus 179 ~~G~~~~v~ad~vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~~~ 254 (502)
.+|+..+++||+||+|||.+|.||+.+++...+........+.. ..++|.......+..++++++++|..++ ..++
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~g~~~~~P~~~~~~~r~ 270 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVAIQSEQGNVLIIPREGGHLVRF 270 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEEEEETTEEEEEEECTTSSCEEE
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEEEEcCCceEEEEEcCCCcEEEE
Confidence 36766678899999999999999999998664433222212111 2234432222223336678899999887 6677
Q ss_pred EEEeCC--CC----CCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCC------------CC
Q 010765 255 LVDVPG--QK----VPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQP------------TP 316 (502)
Q Consensus 255 ~~~~~~--~~----~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 316 (502)
++.++. +. ....+.+++.+.+++.+.+.. .++ ....++..++.....+.+|. .|
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~g 342 (639)
T 2dkh_A 271 YVEMDKLDADERVASRNITVEQLIATAQRVLHPYK-LEV-------KNVPWWSVYEIGQRICAKYDDVVDAVATPDSPLP 342 (639)
T ss_dssp EEECC-----------CCCHHHHHHHHHHHHTTSC-EEE-------EEEEEEEEECCCCEECSCSBSCCCSSCCTTSCCC
T ss_pred EEECCCcCcccccccCCCCHHHHHHHHHHHhCccc-Ccc-------eeeeEEEecccccchhhhhhccccccccccCccC
Confidence 776543 11 122345555555555444311 011 00112234555555667776 89
Q ss_pred CEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCCh
Q 010765 317 GALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPD 396 (502)
Q Consensus 317 rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~ 396 (502)
||+|+|||||.++|++|||||+||+||.+|+|+|+.+. ++.+.+.+|++|+++|+|++..++..++.+.++|...+.
T Consensus 343 RV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl---~g~a~~~lL~~Ye~eR~~~a~~~~~~s~~~~~~~~~~~~ 419 (639)
T 2dkh_A 343 RVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVL---RKQCAPELLHTYSSERQVVAQQLIDFDREWAKMFSDPAK 419 (639)
T ss_dssp CEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHH---TTSBCGGGGHHHHHHHHHHHHHHHHHHHHSCC-------
T ss_pred cEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHH---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999999998764 223346799999999999999999999988888765321
Q ss_pred ----------hHHHHHHHHHhhhhhcCCCCchhHHHHhc-----cCCCChHHHHHHHHH
Q 010765 397 ----------QARKEMRQACFDYLSLGGVFSTGPVALLS-----GLNPRPLSLVLHFFA 440 (502)
Q Consensus 397 ----------~~~~~lr~~~~~~~~~g~~~~~~~~~~~~-----~~~~~P~~~~~h~~~ 440 (502)
...+.+++.......++.+|..+++..-. ....+||.|+||.|+
T Consensus 420 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~Y~~s~l~~~~~~~~~~~~~~~G~r~p~~~~ 478 (639)
T 2dkh_A 420 EGGQGGVDPKEFQKYFEQHGRFTAGVGTHYAPSLLTGQAKHQALASGFTVGMRFHSAPV 478 (639)
T ss_dssp -------CHHHHHHHHHHHHHHHTTCCCCCCSSSSSCCCTTGGGBTTSCTTSBCCCCEE
T ss_pred ccccccccHHHHHHHHHHhccccccCCcccCCCCccCCCCccccCCCCCCcCCCCCCeE
Confidence 11111222111124577888877653211 123579999999875
No 8
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=100.00 E-value=6.2e-40 Score=349.22 Aligned_cols=385 Identities=18% Similarity=0.186 Sum_probs=246.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC--cc-------cchhhhccc------cccceEEEEECCce
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD--RI-------VDCVEEIDA------QQVLGYALFKDGKS 116 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~--r~-------~~~l~~l~~------~~~~g~~~~~~g~~ 116 (502)
.+++||+||||||+||++|+.|+++|++|+||||.+.+.. +. .++++.++. ...........+.
T Consensus 47 ~~~~DVvIVGaG~aGL~~A~~La~~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~- 125 (570)
T 3fmw_A 47 ALTTDVVVVGGGPVGLMLAGELRAGGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGI- 125 (570)
T ss_dssp ----CEEEECCSHHHHHHHHHHHHTTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTB-
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCc-
Confidence 4568999999999999999999999999999999866532 11 133333322 1110000001111
Q ss_pred eeeeccCcCC-CCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEe
Q 010765 117 TRLSYPLEKF-HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 194 (502)
Q Consensus 117 ~~~~~~~~~~-~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~A 194 (502)
....++.... ...+.++.++|..+++.|.+.+++. |+++++++ |++++++++++. |++...+|+ .+++||+||+|
T Consensus 126 ~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~-gv~i~~~~~v~~l~~~~~~v~-v~~~~~~G~-~~~~a~~vV~A 202 (570)
T 3fmw_A 126 FTQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREA-GAEIPRGHEVTRLRQDAEAVE-VTVAGPSGP-YPVRARYGVGC 202 (570)
T ss_dssp CTTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHH-TEECCBSCEEEECCBCSSCEE-EEEEETTEE-EEEEESEEEEC
T ss_pred ccccccccccCCCCCeeEEeCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCeEE-EEEEeCCCc-EEEEeCEEEEc
Confidence 0001111111 1223457899999999999999887 89999997 999998877654 555556773 35779999999
Q ss_pred cCCCchhhhhhcCCCCCCccceeEEEEeecCCCCCCceE-EEEcCCCcEEE-EecCCCeE-EEEEEeCCCC----CCCCC
Q 010765 195 DGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLPFANHGH-VILADPSPILF-YPISSTEV-RCLVDVPGQK----VPSIS 267 (502)
Q Consensus 195 DG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~p~~~~~~-~~~~~~~~~~----~~~~~ 267 (502)
||.+|.+|+.+++..++..+...++... ...+.+.... +...+.+++++ +|++++.. ++++..+... ....+
T Consensus 203 DG~~S~vR~~lGi~~~~~~~~~~~~~~~-v~~~~~~~~~~~~~~~~G~~~~~~P~~~g~~~~i~~~~~~~~~~~~~~~~~ 281 (570)
T 3fmw_A 203 DGGRSTVRRLAADRFPGTEATVRALIGY-VTTPEREVPRRWERTPDGILVLAFPPEGGLGPGWSSSSTGHSPAADEGPVT 281 (570)
T ss_dssp SCSSCHHHHHTTCCCCCCCCCEEEEEEE-CCCCSCSSCCCCCCCCSSCEEECCCC------CEEEEEESCC-----CCCC
T ss_pred CCCCchHHHHcCCCCccceeeeEEEEEE-EEecCCCcceEEEecCCEEEEEEeecCCCeEEEEEEEeCCCCccccccCCC
Confidence 9999999999998877666655555543 2222222111 12345567776 79988866 6666554221 12234
Q ss_pred chHHHHHHHHHcCCCCChhhHHHHHHHHhcC-CeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHH
Q 010765 268 NGEMANYLKAMVAPQVPPELHEAFVSAVERG-NIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 346 (502)
Q Consensus 268 ~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~L 346 (502)
.+++.+.+++.+...+. ..+.. +...|+.....+.+|..|||+|+|||||.++|++|||+|+||+||.+|
T Consensus 282 ~~~~~~~l~~~~~~~~~---------~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~gl~DA~~L 352 (570)
T 3fmw_A 282 LEDLGAAVARVRGTPLT---------LTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTGLQDAVNL 352 (570)
T ss_dssp HHHHHHHTTSSSSCCCC---------CCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhcccc---------cceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHHHHHHHHH
Confidence 44444444432221111 11112 456778888889999999999999999999999999999999999999
Q ss_pred HHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHHHHHHhhhh--------------hc
Q 010765 347 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYL--------------SL 412 (502)
Q Consensus 347 a~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~--------------~~ 412 (502)
+|+|+.+. .+.+.+.+|++|+++|++++..++..++.+.++|..+ ......+|+..+..+ .+
T Consensus 353 a~~La~~~---~g~~~~~lL~~Ye~eR~~~~~~~~~~s~~~~~l~~~~-~~~~~~lR~~~~~l~~~~~~~~~~~~~~~g~ 428 (570)
T 3fmw_A 353 GWKLAARV---RGWGSEELLDTYHDERHPVAERVLLNTRAQLALMRPD-EQHTTPLRGFVEELLGTDEVNRYFTGMITGT 428 (570)
T ss_dssp HHHHHHHH---HSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSC-TTTHHHHHHHHHHHTTSHHHHHHHHHHHHST
T ss_pred HHHHHHHH---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-chHHHHHHHHHHHHhcCHHHHHHHHHHHhCC
Confidence 99998653 1223467999999999999999999999999998764 232566777665443 23
Q ss_pred CCCCchhHHHHhcc-CCCChHHHHHHHH----------HHHHHHH-hhhccCCCC
Q 010765 413 GGVFSTGPVALLSG-LNPRPLSLVLHFF----------AVAIYGV-GRLLLPFPS 455 (502)
Q Consensus 413 g~~~~~~~~~~~~~-~~~~P~~~~~h~~----------~~~l~~~-~~~~~~~~~ 455 (502)
+.+|..+ ....+. -.+.+|.|+|++. +.+++.. .|+|+.+..
T Consensus 429 ~~~Y~~~-~~~~~~~~~~~~G~r~pd~~l~~~~g~~~~l~~~l~~~~~~ll~~~~ 482 (570)
T 3fmw_A 429 DVRYATF-APAASARPHPWPGRFAGGLVLSRPSGEPVPVAELLRSARPLLLDLAG 482 (570)
T ss_dssp TCCCCCS-CC----CCCSSTTCBCTTCEECCSTTCCEEHHHHSTTCCCEEECSSC
T ss_pred CcccCCC-CCCCCCCCCccccCcCCCceeecCCCcceeHHHHhcCCeEEEEEecC
Confidence 4444431 000001 2456778888763 3566544 477776543
No 9
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=100.00 E-value=1.6e-38 Score=325.33 Aligned_cols=342 Identities=22% Similarity=0.246 Sum_probs=227.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC--ccc-------chhhhccc--------cccceEEEEEC-
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD--RIV-------DCVEEIDA--------QQVLGYALFKD- 113 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~--r~~-------~~l~~l~~--------~~~~g~~~~~~- 113 (502)
+.++||+||||||+|+++|+.|+++|++|+|+||++.... +.. +.++.++. ....++.++..
T Consensus 4 ~~~~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 83 (399)
T 2x3n_A 4 DNHIDVLINGCGIGGAMLAYLLGRQGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHD 83 (399)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEET
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCC
Confidence 3458999999999999999999999999999999865421 111 23332211 11223333332
Q ss_pred CceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEE
Q 010765 114 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 192 (502)
Q Consensus 114 g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI 192 (502)
+.. ...++.........++.++|..|.+.|.+.+++.+|+++++++ |+++.++++++.+ .+..++|++ ++||+||
T Consensus 84 g~~-~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g-~v~~~~g~~--~~ad~vV 159 (399)
T 2x3n_A 84 GEL-LRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAID-QVRLNDGRV--LRPRVVV 159 (399)
T ss_dssp TEE-EEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEE-EEEETTSCE--EEEEEEE
T ss_pred CCE-EEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEE-EEEECCCCE--EECCEEE
Confidence 321 1222222222233467899999999999999988789999997 9999887775420 455677874 5699999
Q ss_pred EecCCCchhhhhhcCCCCCC--ccce--eEEEEe-ecCCCCCCceEEEEcC-CCcEEEEecCCCeEEEEEEeCCCCCC--
Q 010765 193 VCDGCFSNLRRSLCKPKVDV--PSCF--VGLVLE-NCQLPFANHGHVILAD-PSPILFYPISSTEVRCLVDVPGQKVP-- 264 (502)
Q Consensus 193 ~ADG~~S~vR~~l~~~~~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~~-- 264 (502)
+|||.+|.+|+.+++..... .... .++... ..+.+. .. .++.+ +++++++|++++...|.+.++.+...
T Consensus 160 ~AdG~~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 236 (399)
T 2x3n_A 160 GADGIASYVRRRLLDIDVERRPYPSPMLVGTFALAPCVAER--NR-LYVDSQGGLAYFYPIGFDRARLVVSFPREEAREL 236 (399)
T ss_dssp ECCCTTCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHHHHC--EE-EEECTTSCEEEEEEETTTEEEEEEECCHHHHHHH
T ss_pred ECCCCChHHHHHhCCCccccCCCCCCceEEEEEEecCCCCC--cc-EEEcCCCcEEEEEEcCCCEEEEEEEeCccccccc
Confidence 99999999999998765433 2233 344332 111222 23 56677 88999999988766666644422110
Q ss_pred --CCCchHHHHHHHHHcCCCCChhhH-HHHHHHHhcCCeeeccCCC-CCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHH
Q 010765 265 --SISNGEMANYLKAMVAPQVPPELH-EAFVSAVERGNIRTMPNRS-MPADPQPTPGALLMGDAFNMRHPLTGGGMTVAL 340 (502)
Q Consensus 265 --~~~~~~~~~~l~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al 340 (502)
..+.+++.+.+. .+++.+. ..+ +..+...+..+++.. ....+|..+||+|+|||||.++|++|||+|+||
T Consensus 237 ~~~~~~~~~~~~~~-----~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~al 310 (399)
T 2x3n_A 237 MADTRGESLRRRLQ-----RFVGDESAEAI-AAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPITGQGMNLAI 310 (399)
T ss_dssp HHSTTSHHHHHHHH-----TTCCGGGHHHH-HTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGGGCCHHHHHH
T ss_pred cccCCHHHHHHHHh-----hcCCcchhhHH-hcCCccceEEechhhcccccccccCcEEEEechhccCCCcccccHHHHH
Confidence 023344444444 2333442 222 222212445667666 567789899999999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHHHHHHHHhhhh
Q 010765 341 SDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARKEMRQACFDYL 410 (502)
Q Consensus 341 ~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~~lr~~~~~~~ 410 (502)
+||.+|+++|..... .+.+.+.+|+.|+++|++++..++..+..+.+++... ++....+ +..++.+
T Consensus 311 ~da~~La~~L~~~~~--~~~~~~~~l~~Y~~~r~~~~~~~~~~s~~~~~~~~~~-~~~~~~~-~~~~~~~ 376 (399)
T 2x3n_A 311 EDASALADALDLALR--DACALEDALAGYQAERFPVNQAIVSYGHALATSLEDR-QRFAGVF-DTALQGS 376 (399)
T ss_dssp HHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-HHHHHHH-HC-----
T ss_pred HHHHHHHHHHHhhhc--ccchHHHHHHHHHHHhccHHHHHHHHHHHhhhhhccc-CchHHHH-HHHHhhh
Confidence 999999999986532 1224578999999999999999999999998888654 4444555 6555444
No 10
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=100.00 E-value=8.3e-38 Score=320.52 Aligned_cols=323 Identities=17% Similarity=0.227 Sum_probs=195.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcc-----------cchhhhccccc-----------cceEEEEE
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI-----------VDCVEEIDAQQ-----------VLGYALFK 112 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~-----------~~~l~~l~~~~-----------~~g~~~~~ 112 (502)
.+|+||||||+||++|+.|+++|++|+|+||++.+..+. .++++.+.... ......+.
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~~ 81 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRKHGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRFY 81 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEEE
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeEe
Confidence 589999999999999999999999999999987654321 13444433210 00001111
Q ss_pred CCceeeeecc--CcC---CCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEE
Q 010765 113 DGKSTRLSYP--LEK---FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRA 186 (502)
Q Consensus 113 ~g~~~~~~~~--~~~---~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v 186 (502)
+......... ... .........++|..|.+.|.+.+ +.++++++ ++++++.++. +|++.++||++.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~----~~~v~~~~~v~~~~~~~~~--~v~v~~~dG~~~-- 153 (412)
T 4hb9_A 82 NERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL----ANTIQWNKTFVRYEHIENG--GIKIFFADGSHE-- 153 (412)
T ss_dssp CTTSCEEEC--------------CEEEEEHHHHHHHHHTTC----TTTEECSCCEEEEEECTTS--CEEEEETTSCEE--
T ss_pred cCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc----cceEEEEEEEEeeeEcCCC--eEEEEECCCCEE--
Confidence 1111111110 000 01112235789999999998765 23578888 9999876554 356778899864
Q ss_pred ecCEEEEecCCCchhhhhhcCCCCCCccceeEEEEeec-------CCCC---CCceEEEEcC-CCcE------------E
Q 010765 187 YAPLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENC-------QLPF---ANHGHVILAD-PSPI------------L 243 (502)
Q Consensus 187 ~ad~vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~-------~~~~---~~~~~~~~~~-~~~~------------~ 243 (502)
+||+||||||++|.||+++++...........+..... ..+. ......++.. +... .
T Consensus 154 ~adlvVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (412)
T 4hb9_A 154 NVDVLVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPALTALLPQNFRDGTPNSIVPKSPDWLFISMWRAPVNIHV 233 (412)
T ss_dssp EESEEEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHHHHHHSCGGGTSSCCEEECCSSSEEEEEEEEEEESCTTS
T ss_pred EeeEEEECCCCCcchHHHhCCCccccccceeEEEEEEecchhhhcchhhhhccCCcceEeecCCCcceeeeeecCCceeE
Confidence 59999999999999999998765544333333322100 0000 0000111111 1111 0
Q ss_pred EEecCCCe--EEEEEEeCC----CCCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCC-CCCCCCCCC
Q 010765 244 FYPISSTE--VRCLVDVPG----QKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRS-MPADPQPTP 316 (502)
Q Consensus 244 ~~p~~~~~--~~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 316 (502)
.++..+.. ..|.+.... +...++..+...+.+++.+. .+.+.+.+.+. ..+...+..+.... .+..+|..|
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~p~~~~li~-~~~~~~~~~~~~~~~~~~~~~~~g 311 (412)
T 4hb9_A 234 EASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMI-SWDPSLHTLVQ-QSDMENISPLHLRSMPHLLPWKSS 311 (412)
T ss_dssp CGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTT-TSCHHHHHHHH-TSCTTCCEEEEEEECCCCCCCCCC
T ss_pred EEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhc-cCChHHHHHHH-hcccceeccchhcccccccccccc
Confidence 11111111 112222211 12233455666677766554 45666655432 22223333333332 245678999
Q ss_pred CEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHh
Q 010765 317 GALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYK 389 (502)
Q Consensus 317 rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~ 389 (502)
||+|+|||||.++|++|||||+||+||.+|+|+|+.+.. +...++++|++||++|+|++..++..|....+
T Consensus 312 rv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~--~~~~~~~aL~~Ye~~R~~~~~~~~~~s~~~~~ 382 (412)
T 4hb9_A 312 TVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVAS--GHEELVKAISDYEQQMRAYANEIVGISLRSAQ 382 (412)
T ss_dssp SEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHT--TSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhc--CCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999987532 23446789999999999999999988876543
No 11
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=2e-35 Score=300.91 Aligned_cols=315 Identities=18% Similarity=0.238 Sum_probs=203.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc--cc-----chhhhcccc--------ccceEEEEECCcee
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR--IV-----DCVEEIDAQ--------QVLGYALFKDGKST 117 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r--~~-----~~l~~l~~~--------~~~g~~~~~~g~~~ 117 (502)
++|||+||||||+||++|+.|+++|++|+|+||++..+.. .. ++++.++.. .+.+..++..+...
T Consensus 3 e~yDViIVGaGpaGl~~A~~La~~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 3oz2_A 3 ETYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKR 82 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCCce
Confidence 4599999999999999999999999999999998654321 11 344443321 23334444332221
Q ss_pred eeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecC
Q 010765 118 RLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDG 196 (502)
Q Consensus 118 ~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG 196 (502)
...... .......++.++|..|++.|.+.+.+. |+++++++ ++++..+++.+.++... .+|+..+++||+||+|||
T Consensus 83 ~~~~~~-~~~~~~~~~~i~R~~~~~~L~~~a~~~-G~~~~~~~~v~~~~~~~~~~~~v~~~-~~~~~~~~~a~~vIgAdG 159 (397)
T 3oz2_A 83 PIILQS-EKAGNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIR-HNNEIVDVRAKMVIAADG 159 (397)
T ss_dssp CEEEEC-SSSSCCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEE-ETTEEEEEEEEEEEECCC
T ss_pred Eeeccc-cccCCceeEEEEHHHHHHHHHHHHHhc-CcEEeeeeeeeeeeeccceeeeeeec-ccccceEEEEeEEEeCCc
Confidence 111111 112334568899999999999999987 89999998 99999999988766654 356666788999999999
Q ss_pred CCchhhhhhcCCCCCCccceeE--EEEeecCC-CCCCceEEEEc---CCCcEEEEecCCCeEEEEEEeCCCCCCCCCchH
Q 010765 197 CFSNLRRSLCKPKVDVPSCFVG--LVLENCQL-PFANHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPSISNGE 270 (502)
Q Consensus 197 ~~S~vR~~l~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 270 (502)
.+|.+|+.++............ ........ ..++...++++ +.++.+++|.+++..++.+....+... ...+
T Consensus 160 ~~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~vg~~~~~~~~~--~~~~ 237 (397)
T 3oz2_A 160 FESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWIH--NRFE 237 (397)
T ss_dssp TTCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTSC--SHHH
T ss_pred cccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceeeeeccCCCceEEEeecccceeEEEEeeccchhh--hhhh
Confidence 9999999998754333322211 11111111 12334444443 346788999998876666654432211 2334
Q ss_pred HHHHHHHHcCCCCChhhHHHHHHHHhcCCee-eccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHh
Q 010765 271 MANYLKAMVAPQVPPELHEAFVSAVERGNIR-TMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNL 349 (502)
Q Consensus 271 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~ 349 (502)
..+++.+.+... +.+. ......... ..+. .....++..+||+|+|||||.++|++|||+|+||+||..||+.
T Consensus 238 ~~~~l~~~~~~~--~~l~----~~~~~~~~~~~~~~-~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~~~A~~ 310 (397)
T 3oz2_A 238 LKNYLDRFIENH--PGLK----KGQDIQLVTGGVSV-SKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQV 310 (397)
T ss_dssp HHHHHHHHHHTC--HHHH----TSEEEEEEEEEEEC-CCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--cccc----ccceeeeeeccccc-cCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHHHHHHH
Confidence 455554433211 1111 111001111 1122 2344567789999999999999999999999999999999999
Q ss_pred cCccCCCCChHHHHHHHHHHHHHcccchhHHH
Q 010765 350 LKPLHDFNDAASLGRYLESFYTLRKPVASTIN 381 (502)
Q Consensus 350 L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~ 381 (502)
|.+... .++..++.|+.|++.+++......
T Consensus 311 i~~~l~--~~~~~~~~L~~Ye~~~~~~~~~~~ 340 (397)
T 3oz2_A 311 TKEAIE--SNDYSPQMMQKYEKLIKERFERKH 340 (397)
T ss_dssp HHHHHH--HTCCSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH--cCCccHHHHHHHHHHHHHHHHHHH
Confidence 976431 112235789999998877654433
No 12
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=100.00 E-value=9.3e-37 Score=311.71 Aligned_cols=358 Identities=20% Similarity=0.217 Sum_probs=225.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC----CCccc-------chhhhcccc--------ccceEEEEECC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE----PDRIV-------DCVEEIDAQ--------QVLGYALFKDG 114 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~----~~r~~-------~~l~~l~~~--------~~~g~~~~~~g 114 (502)
++||+||||||+||++|+.|++.|++|+|+||.+.+ ..+.. +.++.++.. ...++.++..+
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~ 81 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFAG 81 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEETT
T ss_pred CccEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEECC
Confidence 479999999999999999999999999999998641 11111 333333211 22334444444
Q ss_pred ceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 115 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
....+.++. ......++.+++..+.+.|.+.+.+. ++++++++ |+++.++++....|++. .+|+..+++||+||+
T Consensus 82 ~~~~~~~~~--~~~~~~~~~~~~~~l~~~L~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~~~-~~g~~~~~~a~~vV~ 157 (394)
T 1k0i_A 82 QRRRIDLKR--LSGGKTVTVYGQTEVTRDLMEAREAC-GATTVYQAAEVRLHDLQGERPYVTFE-RDGERLRLDCDYIAG 157 (394)
T ss_dssp EEEEECHHH--HHTSCCEEECCHHHHHHHHHHHHHHT-TCEEESSCEEEEEECTTSSSCEEEEE-ETTEEEEEECSEEEE
T ss_pred ceEEecccc--ccCCCceEEechHHHHHHHHHHHHhc-CCeEEeceeEEEEEEecCCceEEEEe-cCCcEEEEEeCEEEE
Confidence 332222211 11123456788899999999999887 89999998 99998764321234442 477755678999999
Q ss_pred ecCCCchhhhhhcCCCCCCccce--eEEEEeecCCCC-CCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCC-CCCCCch
Q 010765 194 CDGCFSNLRRSLCKPKVDVPSCF--VGLVLENCQLPF-ANHGHVILADPSPILFYPISSTEVRCLVDVPGQK-VPSISNG 269 (502)
Q Consensus 194 ADG~~S~vR~~l~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~~~~~~ 269 (502)
|||.+|.+|+.++.......... ..+.......+. .....+...+.++.++.+.+++..+|.+..+... ...++.+
T Consensus 158 AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (394)
T 1k0i_A 158 CDGFHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYANHPRGFALCSQRSATRSQYYVQVPLSEKVEDWSDE 237 (394)
T ss_dssp CCCTTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEECCTTCCEEEEEEETTEEEEEEEECTTCCGGGCCHH
T ss_pred CCCCCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEEEcCCceEEEEecCCCcEEEEEEeCCCCCccccCHH
Confidence 99999999999875421111011 111111112222 1222222234456666666667677777665332 2234444
Q ss_pred HHHHHHHHHcCCCCChhhHHHHHHHHhcC---CeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHH
Q 010765 270 EMANYLKAMVAPQVPPELHEAFVSAVERG---NIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVL 346 (502)
Q Consensus 270 ~~~~~l~~~~~~~~~~~l~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~L 346 (502)
+..+.+.+.+. .... ..+... ....++.......+|..|||+|+|||||.++|++|||+|+||+||.+|
T Consensus 238 ~~~~~l~~~~~----~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ai~da~~L 309 (394)
T 1k0i_A 238 RFWTELKARLP----SEVA----EKLVTGPSLEKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNLAASDVSTL 309 (394)
T ss_dssp HHHHHHHHTSC----HHHH----HHCCCCCEEEEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhC----cccc----cccccCcceeeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHHHHHHHHHH
Confidence 44444544322 2111 111111 112344444456778889999999999999999999999999999999
Q ss_pred HHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhccC--ChhHHHHHHHHHhhhhhcCCCCchhHHHHh
Q 010765 347 RNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSSS--PDQARKEMRQACFDYLSLGGVFSTGPVALL 424 (502)
Q Consensus 347 a~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~--~~~~~~~lr~~~~~~~~~g~~~~~~~~~~~ 424 (502)
+++|..... ...+.+|+.|+++|++++..++..+..+..++... ..+....+|+..+..+...+...+..+..+
T Consensus 310 a~~L~~~~~----~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~r~~~l~~~~~~~~~~~~~~~~~ 385 (394)
T 1k0i_A 310 YRLLLKAYR----EGRGELLERYSAICLRRIWKAERFSWWMTSVLHRFPDTDAFSQRIQQTELEYYLGSEAGLATIAENY 385 (394)
T ss_dssp HHHHHHHHH----HCCGGGGGGHHHHHHHHHHHHHHHHHHHHHHHSCCTTCCHHHHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred HHHHHHHhc----cCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCChHHHHHHHHHHHhhcCCHHHHHHHHHHh
Confidence 999975421 01246899999999999999998888766665522 246677888888877765554444444444
Q ss_pred ccC
Q 010765 425 SGL 427 (502)
Q Consensus 425 ~~~ 427 (502)
+|+
T Consensus 386 ~g~ 388 (394)
T 1k0i_A 386 VGL 388 (394)
T ss_dssp SCC
T ss_pred cCC
Confidence 443
No 13
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=100.00 E-value=2.8e-35 Score=301.14 Aligned_cols=315 Identities=17% Similarity=0.130 Sum_probs=205.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC-CC--cc-------cchhhhcccc------ccceEEEEEC-C
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE-PD--RI-------VDCVEEIDAQ------QVLGYALFKD-G 114 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~-~~--r~-------~~~l~~l~~~------~~~g~~~~~~-g 114 (502)
+.++||+||||||+||++|+.|+++|++|+|+||++.. .. .. .+.++.++.. ...+..++.. .
T Consensus 3 ~~~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 82 (397)
T 2vou_A 3 PTTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVELDSISVPSSSMEYVDALT 82 (397)
T ss_dssp CCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCGGGTCBCCCEEEEEETTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCccccccccccceEEEecCC
Confidence 45689999999999999999999999999999998653 11 11 1344444321 1223333332 1
Q ss_pred ceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 115 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
.......+. ....+++..+.+.|++.+ +++++++++ |+++.+++++ +.+...+|++ ++||+||+
T Consensus 83 g~~~~~~~~-------~~~~~~~~~l~~~L~~~~---~~~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~ad~vV~ 147 (397)
T 2vou_A 83 GERVGSVPA-------DWRFTSYDSIYGGLYELF---GPERYHTSKCLVGLSQDSET---VQMRFSDGTK--AEANWVIG 147 (397)
T ss_dssp CCEEEEEEC-------CCCEEEHHHHHHHHHHHH---CSTTEETTCCEEEEEECSSC---EEEEETTSCE--EEESEEEE
T ss_pred CCccccccC-------cccccCHHHHHHHHHHhC---CCcEEEcCCEEEEEEecCCE---EEEEECCCCE--EECCEEEE
Confidence 111111110 112467788999998886 478899998 9999887774 4466677874 56999999
Q ss_pred ecCCCchhhhhhcCCCCCCccceeEEEEe--ecCCCCC------CceEEEEcCCCcEEEEecCCC------eEEEEEEeC
Q 010765 194 CDGCFSNLRRSLCKPKVDVPSCFVGLVLE--NCQLPFA------NHGHVILADPSPILFYPISST------EVRCLVDVP 259 (502)
Q Consensus 194 ADG~~S~vR~~l~~~~~~~~~~~~~~~~~--~~~~~~~------~~~~~~~~~~~~~~~~p~~~~------~~~~~~~~~ 259 (502)
|||.+|.+|+.++ +.......+..+... ...++.. ....++.++++++.++|+.++ ...|.+..+
T Consensus 148 AdG~~S~vr~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 226 (397)
T 2vou_A 148 ADGGASVVRKRLL-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYGLLDDGHLIAYPIPGRENAESPRLNFQWYWN 226 (397)
T ss_dssp CCCTTCHHHHHHH-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEEEETTEEEEEEEECCSSTTSCCEEEEEEEEE
T ss_pred CCCcchhHHHHhc-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEEecCCCEEEEEECCCCCCccceeEEEEEEec
Confidence 9999999999998 542111111111111 1122211 123445566667888888753 344555444
Q ss_pred CCCC---CC------------------CCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCE
Q 010765 260 GQKV---PS------------------ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGA 318 (502)
Q Consensus 260 ~~~~---~~------------------~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv 318 (502)
.... .. ...+...+ +.+.+.+.+++ +.+.+.. . .....+++....+.+|..|||
T Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~-~--~~~~~~~~~~~~~~~~~~grv 301 (397)
T 2vou_A 227 VAEGPDLDELMTDVRGIRLPTSVHNNSLNPHNLRQ-FHSKGESLFKP-FRDLVLN-A--SSPFVTVVADATVDRMVHGRV 301 (397)
T ss_dssp CCTTHHHHHHTBCTTSCBCSSEECGGGCCHHHHHH-HHHHHTTSCHH-HHHHHHH-C--SSCEEEEEEEBCCSCSEETTE
T ss_pred CCCccchhhhccCCCCcccccccCcccCCHHHHHH-HHHHHHhhChH-HHHHHhc-c--CCcceeeeeeecCCceecCcE
Confidence 2210 00 01222222 33333334444 4333221 1 122345555556778999999
Q ss_pred EEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhcc
Q 010765 319 LLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSS 393 (502)
Q Consensus 319 ~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~ 393 (502)
+|+|||||.++|++|||+|+||+||..|+++|... .+.+.+|++|+++|++++..++..+..+.+++..
T Consensus 302 ~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~------~~~~~~L~~Ye~~R~~~~~~~~~~s~~~~~~~~~ 370 (397)
T 2vou_A 302 LLIGDAAVTPRPHAAAGGAKASDDARTLAEVFTKN------HDLRGSLQSWETRQLQQGHAYLNKVKKMASRLQH 370 (397)
T ss_dssp EECGGGTSBCCGGGSCHHHHHHHHHHHHHHHHHHC------SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEEeccccccCCcchhhHHHHHHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999741 2357899999999999999999999988888764
No 14
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=100.00 E-value=2.6e-34 Score=295.21 Aligned_cols=344 Identities=19% Similarity=0.208 Sum_probs=200.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCe-EEEEecCCCCCCcc---------cchhhhccc------c--ccceEEEEECC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDVTEPDRI---------VDCVEEIDA------Q--QVLGYALFKDG 114 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~-v~lvEr~~~~~~r~---------~~~l~~l~~------~--~~~g~~~~~~g 114 (502)
.++||+||||||+||++|+.|+++|++ |+|+||++...... .+.++.++. . ....+.++...
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~~G~~~v~v~E~~~~~~~~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~~~ 82 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQAGIGKVTLLESSSEIRPLGVGINIQPAAVEALAELGLGPALAATAIPTHELRYIDQS 82 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSSCCCCSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEECTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCCcccceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEcCC
Confidence 358999999999999999999999999 99999986543211 133333321 1 11223333221
Q ss_pred ceeeeeccCc-CCCCCCcceeecchHHHHHHHHHHHcC-CCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCE
Q 010765 115 KSTRLSYPLE-KFHADVSGRSFHNGRFIQRMREKAASL-PNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPL 190 (502)
Q Consensus 115 ~~~~~~~~~~-~~~~~~~g~~i~r~~l~~~L~~~a~~~-~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~ 190 (502)
.......+.. ........+.++|..|++.|.+.+.+. +.+++++++ |+++.+ ++++. |++.+ .+|+..+++||+
T Consensus 83 g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~-v~~~~~~~g~~~~~~ad~ 160 (410)
T 3c96_A 83 GATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRV-LIGARDGHGKPQALGADV 160 (410)
T ss_dssp SCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEE-EEEEEETTSCEEEEEESE
T ss_pred CCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccE-EEEecCCCCCceEEecCE
Confidence 1111111111 011122346899999999999998763 446888888 999988 55443 44433 247655678999
Q ss_pred EEEecCCCchhhhhhcCCCCCCccceeEEEEe-----ecCCCCCCceEEEEcC--CCcEEEEecCC-----C--eEEEEE
Q 010765 191 TIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLE-----NCQLPFANHGHVILAD--PSPILFYPISS-----T--EVRCLV 256 (502)
Q Consensus 191 vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~p~~~-----~--~~~~~~ 256 (502)
||+|||.+|.+|+.++..... ..+.+.... ..... .....++++. +++++++|+++ + ...|.+
T Consensus 161 vV~AdG~~S~vR~~l~~~~~~--~~~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~w~~ 237 (410)
T 3c96_A 161 LVGADGIHSAVRAHLHPDQRP--LSHGGITMWRGVTEFDRFL-DGKTMIVANDEHWSRLVAYPISARHAAEGKSLVNWVC 237 (410)
T ss_dssp EEECCCTTCHHHHHHCTTCCC--CEEEEEEEEEEEEEESCCT-TSSEEEEEECTTCCEEEEEECCHHHHTTTCEEEEEEE
T ss_pred EEECCCccchhHHHhcCCCCC--CCcCCeeEEEeeccccccc-CCCeEEEecCCCCcEEEEEecCCcccCCCCcEEEEEE
Confidence 999999999999999754321 122222211 11111 2223444553 56788999863 3 234444
Q ss_pred EeCCC------CCCCCCc-hHHHHHHHHHcCCCCC--hhhHHHHHHHHhcCCeeeccCCCC-CCCCCCCCCEEEEeCCCC
Q 010765 257 DVPGQ------KVPSISN-GEMANYLKAMVAPQVP--PELHEAFVSAVERGNIRTMPNRSM-PADPQPTPGALLMGDAFN 326 (502)
Q Consensus 257 ~~~~~------~~~~~~~-~~~~~~l~~~~~~~~~--~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~rv~LvGDAAh 326 (502)
..+.. ....+.. ....+.+. .+....+ ..+.+.+.. ...+..+++... +..+|..|||+|+|||||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~i~~---~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh 313 (410)
T 3c96_A 238 MVPSAAVGQLDNEADWNRDGRLEDVLP-FFADWDLGWFDIRDLLTR---NQLILQYPMVDRDPLPHWGRGRITLLGDAAH 313 (410)
T ss_dssp EEEHHHHCCCCSSCCTTCBCCHHHHHH-HHTTCCBTTBCHHHHHHT---CSEEEEEEEEECCCCSCCCBTTEEECTHHHH
T ss_pred EecCcccccCCCccccCCCCCHHHHHH-HhcCCCCchhHHHHHHhc---CcccceeecccCCCccccccCCEEEEecccC
Confidence 43211 1112211 12222222 2221111 122222211 123444554433 457898999999999999
Q ss_pred CCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHH-HHHhh--hccCC-hhHHHHH
Q 010765 327 MRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAG-ALYKV--FSSSP-DQARKEM 402 (502)
Q Consensus 327 ~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~-~~~~~--~~~~~-~~~~~~l 402 (502)
.++|++|||+|+||+||.+|+++|... .+.+.+|++|+++|++++..++..++ .++.+ +.... +...+++
T Consensus 314 ~~~P~~GqG~n~ai~Da~~La~~L~~~------~~~~~~L~~Ye~~r~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 387 (410)
T 3c96_A 314 LMYPMGANGASQAILDGIELAAALARN------ADVAAALREYEEARRPTANKIILANREREKEEWAAASRPKTEKSAAL 387 (410)
T ss_dssp CCCSSTTCTHHHHHHHHHHHHHHHHHC------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC--------
T ss_pred CCCCccchhHHHHHHHHHHHHHHHhcc------CCHHHHHHHHHHHHHHHHHHHHHHhHHHHHhhhhhhhccCCCCHHHH
Confidence 999999999999999999999999753 13578999999999999999887776 44555 22222 2335556
Q ss_pred HHHHhhhhh
Q 010765 403 RQACFDYLS 411 (502)
Q Consensus 403 r~~~~~~~~ 411 (502)
++.+.+|..
T Consensus 388 ~~~~~~~~~ 396 (410)
T 3c96_A 388 EAITGSYRN 396 (410)
T ss_dssp ---------
T ss_pred HHHHHHhhh
Confidence 666655544
No 15
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=100.00 E-value=1.5e-34 Score=305.22 Aligned_cols=336 Identities=18% Similarity=0.190 Sum_probs=220.9
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc---------chhhhccc------ccc---ceEEEEEC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV---------DCVEEIDA------QQV---LGYALFKD 113 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~---------~~l~~l~~------~~~---~g~~~~~~ 113 (502)
+.++||+|||||++|+++|+.|+++|++|+|+||.+.+..... .+++.++. ... ....+...
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~~ 84 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAMRGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRWG 84 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEECS
T ss_pred CccCCEEEECcCHHHHHHHHHHHhCCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEec
Confidence 3458999999999999999999999999999999964432211 12222221 111 11111111
Q ss_pred Ccee--eeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCE
Q 010765 114 GKST--RLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPL 190 (502)
Q Consensus 114 g~~~--~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~ 190 (502)
.... ...+..........++.++|..|.+.|.+.+++. |+++++++ |+++..+++.+.+|.+.+.+|+..+++||+
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 85 KEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERK-GVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHT-TCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred CCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 1111 1222222222334567899999999999999986 89999997 999999999888898888889766788999
Q ss_pred EEEecCCCchhhhhhcCCCCCCccceeEEEE--e-ecCCCC--CCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 010765 191 TIVCDGCFSNLRRSLCKPKVDVPSCFVGLVL--E-NCQLPF--ANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPS 265 (502)
Q Consensus 191 vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~~--~-~~~~~~--~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 265 (502)
||+|||.+|.+|+.++...........++.. . ....+. .........++++++++|++++...+.+.++.+....
T Consensus 164 VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~Pl~~~~~~vg~~~~~~~~~~ 243 (512)
T 3e1t_A 164 IVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILSAAFQDGWFWYIPLSDTLTSVGAVVSREAAEA 243 (512)
T ss_dssp EEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEEEEETTEEEEEEECSSSEEEEEEEEEHHHHTT
T ss_pred EEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEEEEeCCceEEEEEeCCCeEEEEEEecHHHhhh
Confidence 9999999999999996533222222233221 1 112222 2233445567789999999998777777664221111
Q ss_pred CCchHHHHHHHHHcCCCCChhhHHHHHHHHhc-----CCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHH
Q 010765 266 ISNGEMANYLKAMVAPQVPPELHEAFVSAVER-----GNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVAL 340 (502)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al 340 (502)
.. ....+.+++.+. ..+.+.+.+...... ..+...+.......+|..+||+|+|||||.++|++|||+|+|+
T Consensus 244 ~~-~~~~~~~~~~l~--~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~~~P~~GqG~~~Al 320 (512)
T 3e1t_A 244 IK-DGHEAALLRYID--RCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACFVDPVFSSGVHLAT 320 (512)
T ss_dssp TS-SCHHHHHHHHHH--TSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEECCSTTCCHHHHHH
T ss_pred hc-CCHHHHHHHHHH--hCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhcCCCccccCHHHHH
Confidence 11 112223332221 122333322211110 1122222222245677889999999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhcc
Q 010765 341 SDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSS 393 (502)
Q Consensus 341 ~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~ 393 (502)
+||..|+++|..... .....+.+|+.|+++|++....+.++...+|.+...
T Consensus 321 ~dA~~La~~L~~~l~--~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~~~~r 371 (512)
T 3e1t_A 321 YSALLVARAINTCLA--GEMSEQRCFEEFERRYRREYGNFYQFLVAFYDMNQD 371 (512)
T ss_dssp HHHHHHHHHHHHHTT--TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Confidence 999999999986532 223456799999999999999999988888877643
No 16
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=100.00 E-value=1e-33 Score=289.74 Aligned_cols=318 Identities=14% Similarity=0.155 Sum_probs=202.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcc------------cchhhhcccc--------ccceEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI------------VDCVEEIDAQ--------QVLGYALF 111 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~------------~~~l~~l~~~--------~~~g~~~~ 111 (502)
+.++||+||||||+||++|+.|+++|++|+|+||++.+..+. .+.++.++.. .... .++
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~-~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGV-NIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCE-EEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccce-EEE
Confidence 456899999999999999999999999999999986543221 1223222211 1111 222
Q ss_pred ECCceeeeec--cCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEec
Q 010765 112 KDGKSTRLSY--PLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYA 188 (502)
Q Consensus 112 ~~g~~~~~~~--~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~a 188 (502)
.......... +.. .......++|..|.+.|.+.+.+ +++++++ |+++.+++++ +++...+|++ ++|
T Consensus 103 ~~~g~~~~~~~~~~~---~~~~~~~i~r~~l~~~L~~~~~~---~~i~~~~~v~~i~~~~~~---v~v~~~~g~~--~~a 171 (398)
T 2xdo_A 103 DEKGNILSTKNVKPE---NRFDNPEINRNDLRAILLNSLEN---DTVIWDRKLVMLEPGKKK---WTLTFENKPS--ETA 171 (398)
T ss_dssp CSSSEEEEECCCGGG---TTSSCCEECHHHHHHHHHHTSCT---TSEEESCCEEEEEECSSS---EEEEETTSCC--EEE
T ss_pred CCCCCchhhcccccc---CCCCCceECHHHHHHHHHhhcCC---CEEEECCEEEEEEECCCE---EEEEECCCcE--Eec
Confidence 2211111111 110 11122468999999999987643 5678887 9999887764 4466677864 569
Q ss_pred CEEEEecCCCchhhhhhcCCCCCCccceeEEEEeecCCC-----C-------CCceEEEEcCCCcEEEEecCCCeEEEEE
Q 010765 189 PLTIVCDGCFSNLRRSLCKPKVDVPSCFVGLVLENCQLP-----F-------ANHGHVILADPSPILFYPISSTEVRCLV 256 (502)
Q Consensus 189 d~vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 256 (502)
|+||+|||.+|.+|+.++...+ .+.+.......++ . .....++++++..++++|.+++..++.+
T Consensus 172 d~vV~AdG~~S~vR~~l~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~ 247 (398)
T 2xdo_A 172 DLVILANGGMSKVRKFVTDTEV----EETGTFNIQADIHQPEINCPGFFQLCNGNRLMASHQGNLLFANPNNNGALHFGI 247 (398)
T ss_dssp SEEEECSCTTCSCCTTTCCCCC----EEEEEEEEEEEESSHHHHSHHHHHHHTTSEEEEEETTEEEEEEEEETTEEEEEE
T ss_pred CEEEECCCcchhHHhhccCCCc----eEcceEEEEEEeCchhccCchhHhhcCCceEEEecCCCeEEEEeCCCCcEEEEE
Confidence 9999999999999999864322 1222211111111 0 1112234455556677888888777776
Q ss_pred EeCCC-CC------CCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCC-CCCCC-C--CEEEEeCCC
Q 010765 257 DVPGQ-KV------PSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPA-DPQPT-P--GALLMGDAF 325 (502)
Q Consensus 257 ~~~~~-~~------~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~--rv~LvGDAA 325 (502)
.+... .. ...+.++..+.+.+.+. .+.+.+.+.+.. ...+..++....+. .+|.. + ||+|+||||
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rv~LiGDAA 323 (398)
T 2xdo_A 248 SFKTPDEWKNQTQVDFQNRNSVVDFLLKEFS-DWDERYKELIHT---TLSFVGLATRIFPLEKPWKSKRPLPITMIGDAA 323 (398)
T ss_dssp EEECCTTC---CCSCTTCHHHHHHHHHHHTT-TSCHHHHHHHHH---CSCCEEEEEEECCCCSCCCSCCSSCEEECTHHH
T ss_pred EEecCcccccccccCcCCHHHHHHHHHHHHc-CCChHHHHHHhC---cccceeeeeEeccCCCCcccCCCccEEEEeehh
Confidence 55321 11 11234455566665443 455566555433 12333333333322 36654 5 899999999
Q ss_pred CCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHh-hhcc
Q 010765 326 NMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYK-VFSS 393 (502)
Q Consensus 326 h~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~-~~~~ 393 (502)
|.++|++|||+|+||+||.+|+++|.... . +..+.+|++|+++|++++..++..+..... +|..
T Consensus 324 h~~~P~~GqG~n~ai~Da~~La~~L~~~~---~-~~~~~~L~~Y~~~r~~~~~~~~~~s~~~~~~~~~~ 388 (398)
T 2xdo_A 324 HLMPPFAGQGVNSGLVDALILSDNLADGK---F-NSIEEAVKNYEQQMFIYGKEAQEESTQNEIEMFKP 388 (398)
T ss_dssp HCCCCTTSCSHHHHHHHHHHHHHHHHSCC---S-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHST
T ss_pred ccCCCccCccHHHHHHHHHHHHHHHHhcc---C-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999998641 1 115789999999999999999887776553 4443
No 17
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=3.8e-34 Score=297.77 Aligned_cols=320 Identities=16% Similarity=0.197 Sum_probs=209.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC--Cccc------chhhhcccc---------ccceEEEEECCce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP--DRIV------DCVEEIDAQ---------QVLGYALFKDGKS 116 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~--~r~~------~~l~~l~~~---------~~~g~~~~~~g~~ 116 (502)
++||+||||||+|+++|+.|+++|++|+|+||++.+. ...+ +.++.+... ...+..++.....
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 85 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSRRGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDMQ 85 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSSSSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCCc
Confidence 5899999999999999999999999999999986531 1111 334443221 1112222221111
Q ss_pred eeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEe
Q 010765 117 TRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVC 194 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~A 194 (502)
..+.+ +..++.++|..|.+.|.+.+.+. |+++++++ |+++..+++.+.+|++.+. +|+..+++||+||+|
T Consensus 86 ~~~~~-------~~~~~~i~r~~l~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~A 157 (453)
T 3atr_A 86 TVWTV-------NGEGFELNAPLYNQRVLKEAQDR-GVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEA 157 (453)
T ss_dssp CEEEE-------EEEEEEECHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEEC
T ss_pred eEEeE-------CCCcEEEcHHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEEC
Confidence 11111 12357899999999999999886 89999998 9999988888877887765 787667889999999
Q ss_pred cCCCchhhhhhcCCCCC----Cc-cceeEEE--Ee-ecCCCCCCceEEEEc----CCCcEEEEecCCCeEEEEEEeCCCC
Q 010765 195 DGCFSNLRRSLCKPKVD----VP-SCFVGLV--LE-NCQLPFANHGHVILA----DPSPILFYPISSTEVRCLVDVPGQK 262 (502)
Q Consensus 195 DG~~S~vR~~l~~~~~~----~~-~~~~~~~--~~-~~~~~~~~~~~~~~~----~~~~~~~~p~~~~~~~~~~~~~~~~ 262 (502)
||.+|.+|+.++...+. .. ....++. +. ......+....++++ +++++|++|.+++..++.+.++...
T Consensus 158 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~ 237 (453)
T 3atr_A 158 TGYSRSFRSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIFIDQETSPGGYWWYFPKGKNKVNVGLGIQGGM 237 (453)
T ss_dssp CGGGCTTGGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEECCTTTSTTSCEEEEEEETTEEEEEEEEESSS
T ss_pred cCCchhhHHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEEECCCCCCCcEEEEEECCCCeEEEEEEecCCC
Confidence 99999999999865321 11 1122221 11 111112233345553 4678999999998777766654332
Q ss_pred CCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHH
Q 010765 263 VPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSD 342 (502)
Q Consensus 263 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~D 342 (502)
.+....+.+.+.+.+. .+.+... +..+. .-...+. ..+..+|..+|++|+|||||.++|++|||+|+||+|
T Consensus 238 ~~~~~~~~~~~~l~~~-~~~~~~~------~~~~~-~~~~~p~-~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~d 308 (453)
T 3atr_A 238 GYPSIHEYYKKYLDKY-APDVDKS------KLLVK-GGALVPT-RRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMIS 308 (453)
T ss_dssp CCCCHHHHHHHHHHHH-CTTEEEE------EEEEE-EEEEEEC-SSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHH
T ss_pred CCCCHHHHHHHHHHhh-hhhcCCC------eEEec-cceeccC-CCCCCceecCCEEEEeCcccCCCCCccccHHHHHHH
Confidence 1111123333333332 2222110 00000 0011232 345677888999999999999999999999999999
Q ss_pred HHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhc
Q 010765 343 IVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFS 392 (502)
Q Consensus 343 a~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~ 392 (502)
|..||++|...... +...+++|+.|+++|++.....+..+..+.+++.
T Consensus 309 a~~la~~l~~~l~~--~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~~~~~ 356 (453)
T 3atr_A 309 GYCAAKAILSAFET--GDFSASGLWDMNICYVNEYGAKQASLDIFRRFLQ 356 (453)
T ss_dssp HHHHHHHHHHHHHH--TCCSTTTTTHHHHHHHHHTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHc--CCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999754210 0112458999999999999888887777766654
No 18
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=100.00 E-value=8.1e-34 Score=288.48 Aligned_cols=306 Identities=18% Similarity=0.169 Sum_probs=198.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc---------chhhhccc--------cccceEEEEECCc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV---------DCVEEIDA--------QQVLGYALFKDGK 115 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~---------~~l~~l~~--------~~~~g~~~~~~g~ 115 (502)
..+||+||||||+|+++|+.|+++|++|+|+||++....... +.++.++. .....+.++..|.
T Consensus 10 ~~~dVvIVGaG~aGl~~A~~L~~~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~g~ 89 (379)
T 3alj_A 10 KTRRAEVAGGGFAGLTAAIALKQNGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMHNK 89 (379)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEETTE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeCCc
Confidence 358999999999999999999999999999999866532111 23333221 1223344444422
Q ss_pred eeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEe
Q 010765 116 STRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 194 (502)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~A 194 (502)
. ...++.. ....+.++|..|.+.|.+.+.+. |+++++++ |+++.+ ++ .+...+|++ ++||+||+|
T Consensus 90 ~-~~~~~~~----~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~-~~-----~v~~~~g~~--~~ad~vV~A 155 (379)
T 3alj_A 90 S-VSKETFN----GLPWRIMTRSHLHDALVNRARAL-GVDISVNSEAVAADP-VG-----RLTLQTGEV--LEADLIVGA 155 (379)
T ss_dssp E-EEEECGG----GCCEEEEEHHHHHHHHHHHHHHT-TCEEESSCCEEEEET-TT-----EEEETTSCE--EECSEEEEC
T ss_pred e-eeeccCC----CCceEEECHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEe-CC-----EEEECCCCE--EEcCEEEEC
Confidence 1 1111111 12357899999999999999987 89999998 999987 33 234567764 569999999
Q ss_pred cCCCchhhhhhcCCCCCCccceeEEEEe-ec-----CCCCCC-ceEE--EEcCCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 010765 195 DGCFSNLRRSLCKPKVDVPSCFVGLVLE-NC-----QLPFAN-HGHV--ILADPSPILFYPISSTEVRCLVDVPGQKVPS 265 (502)
Q Consensus 195 DG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~-----~~~~~~-~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 265 (502)
||.+|.+|+.+++........+..+... .. ....+. .... +++++++++++|++++...|.+..+.+. +.
T Consensus 156 dG~~s~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~-~~ 234 (379)
T 3alj_A 156 DGVGSKVRDSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNFWPRVQRILYSPCNENELYLGLMAPAAD-PR 234 (379)
T ss_dssp CCTTCHHHHHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECCSSSCCEEEEEECSSSEEEEEEEECTTC-TT
T ss_pred CCccHHHHHHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceEECCCCEEEEEECCCCcEEEEEEecCCC-CC
Confidence 9999999999986321111112112111 11 111112 2222 4567788999999999878877765321 11
Q ss_pred CCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCC-CCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHH
Q 010765 266 ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRS-MPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 344 (502)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~ 344 (502)
++++.+.+..+.. .+ +.+.+.+.. .+...+..++... .+..+|..|||+|+|||||.++|++|||+|+||+||.
T Consensus 235 --~~~l~~~~~~~~~-~~-~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai~da~ 309 (379)
T 3alj_A 235 --GSSVPIDLEVWVE-MF-PFLEPCLIE-AAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAMVNAF 309 (379)
T ss_dssp --TTCSSCCHHHHHH-HC-GGGHHHHHH-HHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHHHHHH
T ss_pred --HHHHHHHHhcCCc-hh-ccHHHHHhh-CCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHHHHHH
Confidence 1111122221110 01 111122211 1112333344333 2357788899999999999999999999999999999
Q ss_pred HHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHH
Q 010765 345 VLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLA 384 (502)
Q Consensus 345 ~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a 384 (502)
+|+++|... ...+.+|+.|+++|++++..++..+
T Consensus 310 ~La~~L~~~------~~~~~~l~~Y~~~r~~~~~~~~~~s 343 (379)
T 3alj_A 310 SLSQDLEEG------SSVEDALVAWETRIRPITDRCQALS 343 (379)
T ss_dssp HHHHHTTSS------SCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccc------cCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999753 1347899999999999999888777
No 19
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=100.00 E-value=4.4e-34 Score=304.65 Aligned_cols=341 Identities=14% Similarity=0.155 Sum_probs=217.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--------chhhhccc------c---ccceEEEEECC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--------DCVEEIDA------Q---QVLGYALFKDG 114 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--------~~l~~l~~------~---~~~g~~~~~~g 114 (502)
+.++||+|||||++|+++|+.|+++|++|+|+||.+.+..... ..++.++. . ...+..+....
T Consensus 21 M~~~DVvIVGgG~AGl~aA~~Lar~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~~~~ 100 (591)
T 3i3l_A 21 MTRSKVAIIGGGPAGSVAGLTLHKLGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFLWGQ 100 (591)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEECSS
T ss_pred CCCCCEEEECcCHHHHHHHHHHHcCCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEEecC
Confidence 4579999999999999999999999999999999965433222 23333221 1 11122222221
Q ss_pred cee--eeeccCcCC--CCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecC
Q 010765 115 KST--RLSYPLEKF--HADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAP 189 (502)
Q Consensus 115 ~~~--~~~~~~~~~--~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad 189 (502)
... ...+..... ...+.++.+++..|.+.|.+.+++. |+++++++ |+++..+++.+.+|++.. +|+..+++||
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~V~~v~~~~g~~~~V~~~~-~G~~~~i~Ad 178 (591)
T 3i3l_A 101 DQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSR-GITVHEETPVTDVDLSDPDRVVLTVRR-GGESVTVESD 178 (591)
T ss_dssp SCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEECCSTTCEEEEEEE-TTEEEEEEES
T ss_pred CCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCEEEEEEec-CCceEEEEcC
Confidence 111 111211111 0223467899999999999999886 89999997 999987655555566544 6765678899
Q ss_pred EEEEecCCCchhhhhhcCCCCCCccceeEEE--Eee-cCC--CCCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCC
Q 010765 190 LTIVCDGCFSNLRRSLCKPKVDVPSCFVGLV--LEN-CQL--PFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVP 264 (502)
Q Consensus 190 ~vI~ADG~~S~vR~~l~~~~~~~~~~~~~~~--~~~-~~~--~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 264 (502)
+||+|||.+|.+|+.+++..........++. +.. ... +..........+.+++|++|..++...+.+..+.+...
T Consensus 179 lVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~~~~~G~~w~iPl~~~~~sv~~~~~~~~~~ 258 (591)
T 3i3l_A 179 FVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSITFEDGWVWMIPIKDDLYSVGLVVDRSKSA 258 (591)
T ss_dssp EEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEEEETTEEEEEEECSSSEEEEEEEEEGGGHH
T ss_pred EEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEEEcCCcEEEEEECCCCeEEEEEEcCHHHHh
Confidence 9999999999999999865322111111111 111 112 22233445556778999999998876666655432211
Q ss_pred CCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHH
Q 010765 265 SISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIV 344 (502)
Q Consensus 265 ~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~ 344 (502)
........+.+++... . .+.+.+.+...........++.......+|..+|++++|||||.++|+.|||+|+|++||.
T Consensus 259 ~l~~~~~~~~~~~l~~-~-~p~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~~Pl~GqGinlAl~dA~ 336 (591)
T 3i3l_A 259 EVREQGADAFYSSTLA-K-CAKAMDILGGAEQVDEVRIVQDWSYDTEVFSADRFFLCGDAACFTDPLFSQGVHLASQSAV 336 (591)
T ss_dssp HHHHHCHHHHHHHHHT-T-CHHHHHHHTTCEECSCCEEEEEEEEEESCSEETTEEECGGGTCBCCGGGCCHHHHHHHHHH
T ss_pred hhccCCHHHHHHHHHH-h-CHHHHHHHhcCccccCceEecccccchhhcccCCEEEEccccccCCCcccccHHHHHHHHH
Confidence 1111112233333222 1 2233332221111122223333333456788899999999999999999999999999999
Q ss_pred HHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHH--hhhccCChhH
Q 010765 345 VLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALY--KVFSSSPDQA 398 (502)
Q Consensus 345 ~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~--~~~~~~~~~~ 398 (502)
.|+++|..... ++...+.+++.|++.|++....+..+....| ......+.++
T Consensus 337 ~LA~~L~~~l~--~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y~~~~~~r~ds~F 390 (591)
T 3i3l_A 337 SAAAAIDRITR--HGDEKDAVHAWYNRTYREAYEQYHQFLASFYTFASFTEPDSEF 390 (591)
T ss_dssp HHHHHHHHHHH--CGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCHH
T ss_pred HHHHHHHHHHh--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCChHH
Confidence 99999976421 3344577899999999999999999999888 4444333333
No 20
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=1.3e-32 Score=280.87 Aligned_cols=326 Identities=18% Similarity=0.228 Sum_probs=214.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc--cc-----chhhhcccc--------ccceEEEEECCceee
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR--IV-----DCVEEIDAQ--------QVLGYALFKDGKSTR 118 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r--~~-----~~l~~l~~~--------~~~g~~~~~~g~~~~ 118 (502)
++||+|||||++|+++|+.|+++|++|+|+||++..... .. +.++.++.. ...++.++.......
T Consensus 4 ~~dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (397)
T 3cgv_A 4 TYDVLVVGGGPGGSTAARYAAKYGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSEKRP 83 (397)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTCSSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCCCEE
Confidence 589999999999999999999999999999999754321 11 344444221 223333333222111
Q ss_pred eeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCC
Q 010765 119 LSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGC 197 (502)
Q Consensus 119 ~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~ 197 (502)
..++.... ....++.++|..|.+.|.+.+++. |+++++++ |+++..+++.+.+|.+... ++..+++||+||+|||.
T Consensus 84 ~~~~~~~~-~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~~~v~gv~~~~~-~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 84 IILQSEKA-GNEVGYVLERDKFDKHLAALAAKA-GADVWVKSPALGVIKENGKVAGAKIRHN-NEIVDVRAKMVIAADGF 160 (397)
T ss_dssp EEEC------CCCEEEECHHHHHHHHHHHHHHH-TCEEESSCCEEEEEEETTEEEEEEEEET-TEEEEEEEEEEEECCCT
T ss_pred EEEecccc-CCceeEEEeHHHHHHHHHHHHHhC-CCEEEECCEEEEEEEeCCEEEEEEEEEC-CeEEEEEcCEEEECCCc
Confidence 22221111 134578899999999999999886 89999997 9999998888877777553 33346789999999999
Q ss_pred CchhhhhhcCCC-CCCccc-eeEEE--EeecCCCCCCceEEEEc---CCCcEEEEecCCCeEEEEEEeCCCCCCCCCchH
Q 010765 198 FSNLRRSLCKPK-VDVPSC-FVGLV--LENCQLPFANHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPSISNGE 270 (502)
Q Consensus 198 ~S~vR~~l~~~~-~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~ 270 (502)
+|.+|+.++... ...... ..++. ......+ ++...++++ +.++.|++|.+++...+.+..+.+.. ....+
T Consensus 161 ~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~--~~~~~ 237 (397)
T 3cgv_A 161 ESEFGRWAGLKSVILARNDIISALQYRMINVDVD-PDYTDFYLGSIAPAGYIWVFPKGEGMANVGIGSSINWI--HNRFE 237 (397)
T ss_dssp TCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCC-TTEEEEECSTTSTTEEEEEEEEETTEEEEEEEEETTTC--SCHHH
T ss_pred chHhHHhcCCCccCCChhheeEEEEEEeccCCCC-CCcEEEEeCCcCCCceEEEEECCCCeEEEEEEeccccc--cCCCC
Confidence 999999998765 322221 22222 2222222 334445543 55788999999987777776653321 12234
Q ss_pred HHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhc
Q 010765 271 MANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLL 350 (502)
Q Consensus 271 ~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L 350 (502)
..+.+++++... +.+.. ..........+|+. ....+|..+|++++|||||.++|++|||+|+|++||..|++.|
T Consensus 238 ~~~~l~~~~~~~--~~~~~---~~~~~~~~~~~p~~-~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~~la~~l 311 (397)
T 3cgv_A 238 LKNYLDRFIENH--PGLKK---GQDIQLVTGGVSVS-KVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGMYAAQVT 311 (397)
T ss_dssp HHHHHHHHHHTC--HHHHT---SEEEEEEEEEEECC-CCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC--cCCCC---CeEEeeeeeeeecC-CCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 455555443211 11110 00001122334443 3466788899999999999999999999999999999999999
Q ss_pred CccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhcc
Q 010765 351 KPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFSS 393 (502)
Q Consensus 351 ~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~ 393 (502)
.+... .+...+..++.|+++|++........+..+.+++..
T Consensus 312 ~~~~~--~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~~~~~~~ 352 (397)
T 3cgv_A 312 KEAIE--SNDYSPQMMQKYEKLIKERFERKHLRNWVAKEKLAM 352 (397)
T ss_dssp HHHHH--HTCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHH--cCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 75421 111235789999999999888877777777666654
No 21
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=100.00 E-value=3.1e-32 Score=280.53 Aligned_cols=322 Identities=18% Similarity=0.150 Sum_probs=208.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcc--------cchhhhcc------cc---ccceEEEEECC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI--------VDCVEEID------AQ---QVLGYALFKDG 114 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~--------~~~l~~l~------~~---~~~g~~~~~~g 114 (502)
+.++||+|||||++|+++|+.|+++|++|+|+||+..+.... .+.++.++ .. ...+..+...+
T Consensus 3 ~~~~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 3 REKVDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 345899999999999999999999999999999986443211 12233222 11 12234444444
Q ss_pred ceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 115 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
....+.+..........++.++|..|.+.|.+.+++. |+++++++ |+++..+++++. +.+.+.+|+..+++||+||+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~-gv~i~~~~~v~~i~~~~~~~~-v~v~~~~g~~~~~~a~~vV~ 160 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQ-GVDVEYEVGVTDIKFFGTDSV-TTIEDINGNKREIEARFIID 160 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEE-EEEEETTSCEEEEEEEEEEE
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEEE-EEEEcCCCCEEEEEcCEEEE
Confidence 4333444322222334567899999999999999987 89999997 999998877653 66777889877788999999
Q ss_pred ecCCCchhhhhhcCCCCCCccceeEEEEe-ecCCCC----CCceEEEEc---CCCcEEEEecCCCeEEEEEEeCCCCCCC
Q 010765 194 CDGCFSNLRRSLCKPKVDVPSCFVGLVLE-NCQLPF----ANHGHVILA---DPSPILFYPISSTEVRCLVDVPGQKVPS 265 (502)
Q Consensus 194 ADG~~S~vR~~l~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 265 (502)
|||.+|.+|+.++...+........+... ....+. .....+++. +.++.|++|.+++...+.+..+.+....
T Consensus 161 A~G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~~~~~vg~~~~~~~~~~ 240 (421)
T 3nix_A 161 ASGYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRITAVVHKPKVWIWVIPFSNGNTSVGFVGEPSYFDE 240 (421)
T ss_dssp CCGGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEEEEEEETTEEEEEEECTTSEEEEEEEECHHHHTT
T ss_pred CCCCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEEEEeCCCCEEEEEEEECCCCEEEEEEecHHHhhh
Confidence 99999999999987554332222222221 111111 122223332 5578899999998777777665321111
Q ss_pred CCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHH
Q 010765 266 ISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVV 345 (502)
Q Consensus 266 ~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~ 345 (502)
.. ....+.+++.+. . .+.+.+.+........+..++.......++..+|++++|||||.++|++|+|+|+|++||..
T Consensus 241 ~~-~~~~~~l~~~~~-~-~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~~~A~~~a~~ 317 (421)
T 3nix_A 241 YT-GTPEERMRAMIA-N-EGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGATFAMESGSK 317 (421)
T ss_dssp SC-SCHHHHHHHHHH-T-CTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHHHHHHHHHHH
T ss_pred cC-CCHHHHHHHHHH-h-CcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccHHHHHHHHHH
Confidence 11 122333333322 1 12333333222222244555555556677888999999999999999999999999999999
Q ss_pred HHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHH
Q 010765 346 LRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINT 382 (502)
Q Consensus 346 La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~ 382 (502)
|++.|.+....... ..++.|+++++........
T Consensus 318 la~~l~~~~~~~~~----~~~~~y~~~~~~~~~~~~~ 350 (421)
T 3nix_A 318 GGKLAVQFLKGEEV----NWEKDFVEHMMQGIDTFRS 350 (421)
T ss_dssp HHHHHHHHHTTCCC----CHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCch----hHHHHHHHHHHHHHHHHHH
Confidence 99999764321111 2567788877665544433
No 22
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.97 E-value=5.4e-31 Score=267.85 Aligned_cols=296 Identities=16% Similarity=0.160 Sum_probs=183.8
Q ss_pred cEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCC--ccc----c---------hh-hh-cccc--ccceEEEEECC
Q 010765 56 DVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPD--RIV----D---------CV-EE-IDAQ--QVLGYALFKDG 114 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~--r~~----~---------~l-~~-l~~~--~~~g~~~~~~g 114 (502)
||+||||||+||++|+.|+++ |++|+|+||++.... +.. + .+ +. +... ......++..|
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 81 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKNDEQEVLGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLVHHN 81 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSCTTCCCCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCCCCCcceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEEeCC
Confidence 899999999999999999999 999999999865421 110 1 11 11 1111 11122333333
Q ss_pred ceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 115 KSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 115 ~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
.. +.. ........++|..|.+.|.+.+.+. |+++++++ |+++.+.. +++||+||+
T Consensus 82 ~~--~~~-----~~~~~~~~~~r~~l~~~L~~~~~~~-gv~i~~~~~v~~i~~~~----------------~~~ad~vV~ 137 (381)
T 3c4a_A 82 EP--SLM-----STGVLLCGVERRGLVHALRDKCRSQ-GIAIRFESPLLEHGELP----------------LADYDLVVL 137 (381)
T ss_dssp SE--EEC-----CCCSCEEEEEHHHHHHHHHHHHHHT-TCEEETTCCCCSGGGCC----------------GGGCSEEEE
T ss_pred ee--EEe-----cCCCceeeecHHHHHHHHHHHHHHC-CCEEEeCCEeccchhcc----------------cccCCEEEE
Confidence 22 110 0012235799999999999999988 89999987 77664310 145999999
Q ss_pred ecCCCchhhhhhcCCC-CCCc--cceeEEEEeecCCCCCCceEEE--EcCCCcEE--EEecCCCeEEEEEEeCC-----C
Q 010765 194 CDGCFSNLRRSLCKPK-VDVP--SCFVGLVLENCQLPFANHGHVI--LADPSPIL--FYPISSTEVRCLVDVPG-----Q 261 (502)
Q Consensus 194 ADG~~S~vR~~l~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~p~~~~~~~~~~~~~~-----~ 261 (502)
|||.+|. |+.+.... .... .....+... ....+. ...+ ..+.++.+ ++|++++...+.+..+. .
T Consensus 138 AdG~~S~-R~~l~~~~g~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 213 (381)
T 3c4a_A 138 ANGVNHK-TAHFTEALVPQVDYGRNKYIWYGT--SQLFDQ-MNLVFRTHGKDIFIAHAYKYSDTMSTFIVECSEETYARA 213 (381)
T ss_dssp CCGGGGG-TCCSSGGGCCCCEEEEEEEEEEEE--SSCCSS-EEEEEEEETTEEEEEEEEECSSSCEEEEEEECHHHHHHT
T ss_pred CCCCCch-HHhhhhhcCCCcccCCccEEEEec--CCCCCc-ceeeEeeCCCcEEEEEEEEecCCeEEEEEECCccccccC
Confidence 9999999 99873211 1111 111222111 111111 2222 23445443 68998876544444321 1
Q ss_pred CCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeeccCC-CCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHH
Q 010765 262 KVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTMPNR-SMPADPQPTPGALLMGDAFNMRHPLTGGGMTVAL 340 (502)
Q Consensus 262 ~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al 340 (502)
..+..+.++..+.+++.+....+ .. +.+.... ..|+.. ..+..+|..|||+|+|||||.++|++|||+|+||
T Consensus 214 ~~~~~~~~~~~~~l~~~~~~~~~-~~-----~l~~~~~-~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al 286 (381)
T 3c4a_A 214 RLGEMSEEASAEYVAKVFQAELG-GH-----GLVSQPG-LGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAV 286 (381)
T ss_dssp TSSSSCHHHHHHHHHHHTHHHHT-TC-----CCBCCTT-TCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHH
T ss_pred CcccCChHHHHHHHHHHhcccCC-Cc-----hhhcCCC-cceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHH
Confidence 22233444444444443221000 00 0001001 012222 2356788899999999999999999999999999
Q ss_pred HHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhHHHHHHHHHHhhhc
Q 010765 341 SDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVASTINTLAGALYKVFS 392 (502)
Q Consensus 341 ~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~ 392 (502)
+||.+|+++|... .+.+.+|+.|+++|++++..++..++.+.+++.
T Consensus 287 ~Da~~La~~L~~~------~~~~~aL~~Y~~~r~~~~~~~~~~s~~~~~~~~ 332 (381)
T 3c4a_A 287 VVAQLLVKALCTE------DGVPAALKRFEERALPLVQLFRGHADNSRVWFE 332 (381)
T ss_dssp HHHHHHHHHHHHS------SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcc------ccHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 9999999999753 235789999999999999999999888775543
No 23
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.97 E-value=8e-30 Score=272.43 Aligned_cols=328 Identities=17% Similarity=0.174 Sum_probs=199.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC------CCeEEEEecCCCCCCccc-------chhhhc----ccc--cc----c--
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKD------GRRVHVIERDVTEPDRIV-------DCVEEI----DAQ--QV----L-- 106 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~------G~~v~lvEr~~~~~~r~~-------~~l~~l----~~~--~~----~-- 106 (502)
++++||+||||||+||++|+.|++. |++|+||||.+....... ..++.+ ... .. .
T Consensus 33 ~~~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~ll~~~~~~g~~~~~~~~~~ 112 (584)
T 2gmh_A 33 AEEADVVIVGAGPAGLSAATRLKQLAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEELFPDWKEKGAPLNTPVTED 112 (584)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHHHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHHCTTHHHHTCCCCEECCEE
T ss_pred ccCCCEEEECcCHHHHHHHHHHHhcccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHHHHHHHhcCCceeeeechh
Confidence 3468999999999999999999999 999999999866543221 122211 110 01 0
Q ss_pred eEEEEECCceeeeeccC-cC-CCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEe----
Q 010765 107 GYALFKDGKSTRLSYPL-EK-FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKT---- 178 (502)
Q Consensus 107 g~~~~~~g~~~~~~~~~-~~-~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~-~~v~~v~~~~---- 178 (502)
.+.+..... ...++. .. ......++.++|..|.+.|.+.+++. |+++++++ ++++..++ +.+.+|...+
T Consensus 113 ~~~~~~~~~--~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~-Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~ 189 (584)
T 2gmh_A 113 RFGILTEKY--RIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEAL-GVEVYPGYAAAEILFHEDGSVKGIATNDVGIQ 189 (584)
T ss_dssp EEEEECSSC--EEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHT-TCEEETTCCEEEEEECTTSSEEEEEECCEEEC
T ss_pred heeeeccCC--CccccccCccccccCCCEEEeHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCCCEEEEEeCCcccc
Confidence 111221111 122221 01 01122357889999999999999988 89999998 99998775 4566676542
Q ss_pred CCCcE-------EEEecCEEEEecCCCchhhhhh----cCCCCCCccc-eeEEE-EeecC--CCCCCceEEEEcC-----
Q 010765 179 KDGQE-------LRAYAPLTIVCDGCFSNLRRSL----CKPKVDVPSC-FVGLV-LENCQ--LPFANHGHVILAD----- 238 (502)
Q Consensus 179 ~~G~~-------~~v~ad~vI~ADG~~S~vR~~l----~~~~~~~~~~-~~~~~-~~~~~--~~~~~~~~~~~~~----- 238 (502)
.+|+. .+++||+||+|||.+|.+|+.+ ++.....+.. -.++. ....+ ...+.....+++.
T Consensus 190 ~~G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~~ 269 (584)
T 2gmh_A 190 KDGAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDRH 269 (584)
T ss_dssp TTSCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCTT
T ss_pred CCCCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccCC
Confidence 35542 3578999999999999999987 4432211111 11221 11111 1122222233321
Q ss_pred -CCcEEEEecC--CCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCee------eccCCCCC
Q 010765 239 -PSPILFYPIS--STEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIR------TMPNRSMP 309 (502)
Q Consensus 239 -~~~~~~~p~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~------~~~~~~~~ 309 (502)
.+..++||.. ++..++.+..+.+....... ..+.++++.. .+.+.+.+ +...+. .++.....
T Consensus 270 ~~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~--~~~~l~~~~~---~p~i~~~l----~~~~~~~~~~~~~~~~~~~~ 340 (584)
T 2gmh_A 270 TYGGSFLYHLNEGEPLLALGFVVGLDYQNPYLS--PFREFQRWKH---HPSIKPTL----EGGKRIAYGARALNEGGFQS 340 (584)
T ss_dssp SCEEEEEEECCSSSCEEEEEEEEETTCCCTTCC--HHHHHHHHTT---STTTHHHH----TTCEEEEEEEEEEECCGGGG
T ss_pred cCCceEEEEecCCCCeEEEEEEEecCcccccCC--hHHHHHHHHh---ChHHHHHh----CCCeEEEecceEccCCCccc
Confidence 2345788887 67777766654332211111 2233344332 12344332 111111 12333344
Q ss_pred CCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHH---HHHHHHHcccc-hhHHHHHHH
Q 010765 310 ADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRY---LESFYTLRKPV-ASTINTLAG 385 (502)
Q Consensus 310 ~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~---l~~Y~~~R~p~-~~~~~~~a~ 385 (502)
..+|..+|++|+|||||.++|++|||+|+||+||.+||++|..+...++. ..+++ |++|+++|++. .......++
T Consensus 341 ~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~-~~~~a~~~L~~Ye~~r~~~~v~~~l~~~r 419 (584)
T 2gmh_A 341 IPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENL-QSKTIGLHVTEYEDNLKNSWVWKELYSVR 419 (584)
T ss_dssp CCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCC-CCSSSSCCCTHHHHHHHTSHHHHHHHHTT
T ss_pred CCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCc-chhhhhhhHHHHHHHHHHhHHHHHHHHHh
Confidence 66788899999999999999999999999999999999999865321110 11333 89999999987 566666666
Q ss_pred HHHhhhc
Q 010765 386 ALYKVFS 392 (502)
Q Consensus 386 ~~~~~~~ 392 (502)
.+..+|.
T Consensus 420 ~~~~~~~ 426 (584)
T 2gmh_A 420 NIRPSCH 426 (584)
T ss_dssp TTTGGGG
T ss_pred ChhHHHH
Confidence 6666553
No 24
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.97 E-value=4.9e-29 Score=263.90 Aligned_cols=239 Identities=15% Similarity=0.095 Sum_probs=159.6
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh-hhhhcCCC
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRSLCKPK 209 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v-R~~l~~~~ 209 (502)
.++.++|..|.+.|.+.+++..|+++++++|+++..++++.. +.+...+|.+ ++||+||+|||.+|.+ |+.++...
T Consensus 168 ~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~~v~~i~~~~~g~~-~~v~~~~g~~--i~ad~vV~AdG~~S~~~~~~lg~~~ 244 (526)
T 2pyx_A 168 YGYHLNAAKFSQLLTEHCTQKLGVTHIRDHVSQIINNQHGDI-EKLITKQNGE--ISGQLFIDCTGAKSLLLGEHLQVPF 244 (526)
T ss_dssp CEEEECHHHHHHHHHHHHHHTSCCEEEECCEEEEEECTTSCE-EEEEESSSCE--EECSEEEECSGGGCCCCCCCTCCCE
T ss_pred eeEEEcHHHHHHHHHHHHHhcCCCEEEEeEEEEEEecCCCcE-EEEEECCCCE--EEcCEEEECCCcchHHHHHHhCCCc
Confidence 357899999999999999983389999999999987654321 2344566664 6699999999999999 67777644
Q ss_pred CCCcc---ceeEEEEe-ecCC---CCCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCCC
Q 010765 210 VDVPS---CFVGLVLE-NCQL---PFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQ 282 (502)
Q Consensus 210 ~~~~~---~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 282 (502)
..... ...++... .... +..........+.++.+++|..++. ...+.+.... .+.++..+.+++.+...
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~pl~~~~-~~~~v~~~~~---~~~~~~~~~l~~~l~~~ 320 (526)
T 2pyx_A 245 LSQKSVLFNDRALAIQVPYSDANSPIASCTHSTAQPNGWIWDIGLPTRK-GVGYVYSSSH---TNDIDAQKTLFNYLGVD 320 (526)
T ss_dssp EECHHHHCCCEEEEEEEECSSTTCCCCSSEEEEEETTEEEEEEECSSEE-EEEEEECTTT---CCHHHHHHHHHHHHTCC
T ss_pred ccccccccCccEEEEEeeccCCCCCCCCceeEEecCCCeEEEeeCCCce-EEEEEecCCC---CChHHHHHHHHHHHHhc
Confidence 22211 11222221 1111 1122223334566788999998753 3233332221 23345556666555321
Q ss_pred CChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHH
Q 010765 283 VPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASL 362 (502)
Q Consensus 283 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~ 362 (502)
.+ .+ .......++.......++..+||+|+|||||.++|+.|||+|+|++||..|++.|.. .....
T Consensus 321 -~~----~l----~~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~-----~~~~~ 386 (526)
T 2pyx_A 321 -GA----AA----DKLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPP-----NRMVM 386 (526)
T ss_dssp -HH----HH----HHCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCS-----CHHHH
T ss_pred -Cc----cc----ccCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhh-----cCCcC
Confidence 11 11 112333444444456677889999999999999999999999999999999999963 23456
Q ss_pred HHHHHHHHHHcccchhHHHHHHHHHHhh
Q 010765 363 GRYLESFYTLRKPVASTINTLAGALYKV 390 (502)
Q Consensus 363 ~~~l~~Y~~~R~p~~~~~~~~a~~~~~~ 390 (502)
+.+++.|+++|+++...+.+.....|..
T Consensus 387 ~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 414 (526)
T 2pyx_A 387 DTISARVNERYQQHWQQIIDFLKLHYVI 414 (526)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7899999999999999888877666654
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.96 E-value=8.5e-28 Score=253.73 Aligned_cols=244 Identities=15% Similarity=0.060 Sum_probs=159.8
Q ss_pred CcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEecCEEEEecCCCchhh-hhhcC
Q 010765 130 VSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENG-TIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLR-RSLCK 207 (502)
Q Consensus 130 ~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~-~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR-~~l~~ 207 (502)
..++.++|..|.+.|.+.+.+. |+++++++|+++..+++ .+.+ +...+|++ ++||+||+|||.+|.+| +.++.
T Consensus 165 ~~~~~~~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~~~~~~--v~~~~g~~--~~ad~vV~A~G~~S~~~~~~~g~ 239 (511)
T 2weu_A 165 PYAYHFDADEVARYLSEYAIAR-GVRHVVDDVQHVGQDERGWISG--VHTKQHGE--ISGDLFVDCTGFRGLLINQTLGG 239 (511)
T ss_dssp SCEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEE--EEESSSCE--EECSEEEECCGGGCCCCCCCTCC
T ss_pred CeeEEEcHHHHHHHHHHHHHHC-CCEEEECeEeEEEEcCCCCEEE--EEECCCCE--EEcCEEEECCCcchHHHHHHhCC
Confidence 3457899999999999999986 89999889999987544 3333 44567764 56999999999999995 45565
Q ss_pred CCCC---CccceeEEEEe-ecCCC--CCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCC
Q 010765 208 PKVD---VPSCFVGLVLE-NCQLP--FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAP 281 (502)
Q Consensus 208 ~~~~---~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 281 (502)
.... ......++.+. ....+ ..........+.++.+++|..+ ...+.+.+..+ ..+.++..+.+++.+..
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~P~~~-~~~~g~~~~~~---~~~~~~~~~~l~~~~~~ 315 (511)
T 2weu_A 240 RFQSFSDVLPNNRAVALRVPRENDEDMRPYTTATAMSAGWMWTIPLFK-RDGNGYVYSDE---FISPEEAERELRSTVAP 315 (511)
T ss_dssp CEEECTTTCCCCEEEEEEEECSSGGGCCSSEEEEEETTEEEEEEECSS-EEEEEEEECTT---TSCHHHHHHHHHHHHCT
T ss_pred CCccccccCcccceEEEEeccCCCCCCCcceeceecCCCcEEEEECCC-ceEEEEEECCC---CCCHHHHHHHHHHHhCc
Confidence 4321 11111222221 11111 1222234455667899999987 33443333321 22344555556555431
Q ss_pred CCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHH
Q 010765 282 QVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAAS 361 (502)
Q Consensus 282 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~ 361 (502)
.+.+ . .....+.......++..+||+|+|||||.++|+.|+|+|+|++||..|+++|... ..
T Consensus 316 --~~~~--------~--~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~~------~~ 377 (511)
T 2weu_A 316 --GRDD--------L--EANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPGE------RW 377 (511)
T ss_dssp --TCTT--------S--CCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCCT------TC
T ss_pred --cccc--------c--cceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhccC------CC
Confidence 1111 1 1122233333445667899999999999999999999999999999999999741 22
Q ss_pred HHHHHHHHHHHcccchhHHHHHHHHHHhhhccCChhHHH
Q 010765 362 LGRYLESFYTLRKPVASTINTLAGALYKVFSSSPDQARK 400 (502)
Q Consensus 362 ~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~~~~~~~~~~ 400 (502)
.+.+++.|+++|++....+..+....|.+......++..
T Consensus 378 ~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~~~r~~~~fw~ 416 (511)
T 2weu_A 378 DPVLISAYNERMAHMVDGVKEFLVLHYKGAQREDTPYWK 416 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCSHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCcHHHH
Confidence 357899999999999998888877777765433333433
No 26
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.96 E-value=9e-28 Score=254.98 Aligned_cols=232 Identities=14% Similarity=0.081 Sum_probs=153.2
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCe-EEEEEEEeCCCcEEEEecCEEEEecCCCchhhh-hhcCC
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGT-IKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRR-SLCKP 208 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~-v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~-~l~~~ 208 (502)
.++.+++..|.+.|.+.+++. |+++++++|+++..++++ +.+ +...+|+ +++||+||+|||.+|.+|+ .++..
T Consensus 158 ~~~~i~~~~l~~~L~~~a~~~-gv~~~~~~v~~i~~~~~g~~~~--v~~~~g~--~i~ad~vV~A~G~~s~~~~~~lg~~ 232 (538)
T 2aqj_A 158 HAWHFDAHLVADFLKRWAVER-GVNRVVDEVVDVRLNNRGYISN--LLTKEGR--TLEADLFIDCSGMRGLLINQALKEP 232 (538)
T ss_dssp CEEEECHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSCEEE--EEETTSC--EECCSEEEECCGGGCCCCCCCTCCC
T ss_pred ccEEEeHHHHHHHHHHHHHHC-CCEEEEeeEeEEEEcCCCcEEE--EEECCCc--EEEeCEEEECCCCchhhHHHHhCCC
Confidence 457899999999999999986 899999999999875443 333 4456775 3679999999999999954 45543
Q ss_pred CCCCc---cceeEEEEe-ecCCC---CCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCC
Q 010765 209 KVDVP---SCFVGLVLE-NCQLP---FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAP 281 (502)
Q Consensus 209 ~~~~~---~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 281 (502)
..... ....++... ....+ ..........+.++.+++|..++ ..+.+.+..+ ..+.++..+.+++.+..
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~~-~~~g~v~~~~---~~~~~~~~~~l~~~~~~ 308 (538)
T 2aqj_A 233 FIDMSDYLLCDSAVASAVPNDDARDGVEPYTSSIAMNSGWTWKIPMLGR-FGSGYVFSSH---FTSRDQATADFLKLWGL 308 (538)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEEETTE-EEEEEEECTT---TSCHHHHHHHHHHHHTC
T ss_pred ccccccccccceEEEEecccCCcccCCCCceeeeecCCceEEEecCCCc-eEEEEEEcCC---CCChHHHHHHHHHHhcC
Confidence 32111 112223221 11111 11222334556678899999874 3333333221 12334555555555432
Q ss_pred CCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHH
Q 010765 282 QVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAAS 361 (502)
Q Consensus 282 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~ 361 (502)
+ .+ .....++.......++..+||+|+|||||.++|++|||+|+|++||..|++.|... ..
T Consensus 309 --~-~~----------~~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~~------~~ 369 (538)
T 2aqj_A 309 --S-DN----------QPLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPDT------SF 369 (538)
T ss_dssp --C-TT----------CCCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCBT------TC
T ss_pred --C-CC----------CCceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhcc------CC
Confidence 1 11 11233344444456777899999999999999999999999999999999999731 22
Q ss_pred HHHHHHHHHHHcccchhHHHHHHHHHHhh
Q 010765 362 LGRYLESFYTLRKPVASTINTLAGALYKV 390 (502)
Q Consensus 362 ~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~ 390 (502)
.+.+++.|+++|++....+.......|..
T Consensus 370 ~~~~l~~Y~~~~~~~~~~~~~~~~~~y~~ 398 (538)
T 2aqj_A 370 DPRLSDAFNAEIVHMFDDCRDFVQAHYFT 398 (538)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 35789999999999988887766666644
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.96 E-value=2.7e-27 Score=251.69 Aligned_cols=235 Identities=13% Similarity=0.082 Sum_probs=156.1
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCC-eEEEEEEEeCCCcEEEEecCEEEEecCCCchh-hhhhcCC
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENG-TIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRSLCKP 208 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~-~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v-R~~l~~~ 208 (502)
.++.+++..|.+.|.+.+++.+|+++++++|+++..+++ .+.+ +...+|++ ++||+||+|||.+|.+ ++.++..
T Consensus 187 ~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~~V~~i~~~~~g~~~~--v~~~~G~~--i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 187 YAWHFDAHLVADFLRRFATEKLGVRHVEDRVEHVQRDANGNIES--VRTATGRV--FDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp CEEEECHHHHHHHHHHHHHHHSCCEEEECCEEEEEECTTSCEEE--EEETTSCE--EECSEEEECCGGGCCCCCCCTCCC
T ss_pred cceEEcHHHHHHHHHHHHHhcCCcEEEECeEeEEEEcCCCCEEE--EEECCCCE--EECCEEEECCCCchhhHHHHhCCC
Confidence 356799999999999999887689999889999987543 3333 44567764 5699999999999999 5666654
Q ss_pred CCCC---ccceeEEEEe-ecCCC---CCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCC
Q 010765 209 KVDV---PSCFVGLVLE-NCQLP---FANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAP 281 (502)
Q Consensus 209 ~~~~---~~~~~~~~~~-~~~~~---~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 281 (502)
.... ......+... ....+ ..........+.++.+++|..+. ..+.+.+... ..+.++..+.+++.+..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ipl~~~-~~~g~v~~~~---~~~~~~~~~~l~~~~~~ 338 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPFTSAIAMKSGWTWKIPMLGR-FGTGYVYSSR---FATEDEAVREFCEMWHL 338 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSEEEEECSSEEEEEEECSSE-EEEEEEECTT---TSCHHHHHHHHHHHTTC
T ss_pred cccccccccccceEEEeecccCCcccCCCceeeeecCCceEEEccCCCc-cceEEEEecC---CCChHHHHHHHHHhhCc
Confidence 3211 1111222211 11111 11222334446678889998763 3333333221 12345556666665532
Q ss_pred CCChhhHHHHHHHHhcCCeeeccCCCCCCCCCCCCCEEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHH
Q 010765 282 QVPPELHEAFVSAVERGNIRTMPNRSMPADPQPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAAS 361 (502)
Q Consensus 282 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~ 361 (502)
. +.+ . ....++.......++..+|++|+|||||.++|++|||+|+|++||..|+++|... ..
T Consensus 339 ~--p~l--------~--~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L~~~------~~ 400 (550)
T 2e4g_A 339 D--PET--------Q--PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHFPDK------SL 400 (550)
T ss_dssp C--TTT--------S--CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTCCCT------TC
T ss_pred C--ccc--------C--CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhcccc------CC
Confidence 1 111 1 1122233333345567899999999999999999999999999999999999631 23
Q ss_pred HHHHHHHHHHHcccchhHHHHHHHHHHhhh
Q 010765 362 LGRYLESFYTLRKPVASTINTLAGALYKVF 391 (502)
Q Consensus 362 ~~~~l~~Y~~~R~p~~~~~~~~a~~~~~~~ 391 (502)
.+.+++.|+++|++....+.++....|.+-
T Consensus 401 ~~~~l~~Y~~~~~~~~~~i~~~~~~~y~~~ 430 (550)
T 2e4g_A 401 NPVLTARFNREIETMFDDTRDFIQAHFYFS 430 (550)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 467999999999999999988888777653
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.94 E-value=2.4e-26 Score=237.17 Aligned_cols=306 Identities=14% Similarity=0.145 Sum_probs=168.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC---Cccc----------chhhhcccc-------ccceEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP---DRIV----------DCVEEIDAQ-------QVLGYALF 111 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~---~r~~----------~~l~~l~~~-------~~~g~~~~ 111 (502)
.++.||+||||||+||++|+.|+++|++|+|+||++.+. .+.. ...+.++.. ...+..+.
T Consensus 20 ~m~~~ViIVGaGpaGl~~A~~La~~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 99 (430)
T 3ihm_A 20 HMKKRIGIVGAGTAGLHLGLFLRQHDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYY 99 (430)
T ss_dssp ---CEEEEECCHHHHHHHHHHHHHTTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEE
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEE
Confidence 355799999999999999999999999999999986321 1111 111222111 12233333
Q ss_pred ECCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceE--EEEEeeCCeEEEEEEEeCCCcEEEEecC
Q 010765 112 KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTV--TSLLEENGTIKGVQYKTKDGQELRAYAP 189 (502)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v--~~~~~~~~~v~~v~~~~~~G~~~~v~ad 189 (502)
..+.. .+.+.. . ....+..+++..+...|.+.+++. |++++.+++ .++ +.....+|
T Consensus 100 ~~~~~-~~~~~~-~--~~~~~~~v~~~~l~~~L~~~~~~~-Gv~v~~~~v~~~~l-----------------~~~~~~ad 157 (430)
T 3ihm_A 100 VGGPQ-PMRFYG-D--LKAPSRAVDYRLYQPMLMRALEAR-GGKFCYDAVSAEDL-----------------EGLSEQYD 157 (430)
T ss_dssp ECSSS-CEEEEE-E--EEEEEBEECHHHHHHHHHHHHHHT-TCEEEECCCCGGGH-----------------HHHHTTSS
T ss_pred ECCCC-ccccch-h--cCCcceeecHHHHHHHHHHHHHHc-CCEEEEEecchhhh-----------------hhhcccCC
Confidence 22221 111110 0 012346789999999999999887 787765331 111 00112489
Q ss_pred EEEEecCCCchhhhhhcCC-C--CCCccceeEEE-EeecCCCCCCc-eEEEEcCCCcEEEEecCC--CeEEEEE--EeCC
Q 010765 190 LTIVCDGCFSNLRRSLCKP-K--VDVPSCFVGLV-LENCQLPFANH-GHVILADPSPILFYPISS--TEVRCLV--DVPG 260 (502)
Q Consensus 190 ~vI~ADG~~S~vR~~l~~~-~--~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~p~~~--~~~~~~~--~~~~ 260 (502)
+||+|||.+|.+|...... . ...+....... +.....+.... ...+....+.++++|... +...+.+ ..+.
T Consensus 158 ~VV~AdG~~S~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~~~~~~~~~~~~~G~~~~~p~~~~~g~~~~~~~~~~~~ 237 (430)
T 3ihm_A 158 LLVVCTGKYALGKVFEKQSENSPFEKPQRALCVGLFKGIKEAPIRAVTMSFSPGHGELIEIPTLSFNGMSTALVLENHIG 237 (430)
T ss_dssp EEEECCCCTTGGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCSSCCEEEEEETTTEEEEEEEEEETTEEEEEEEEEECTT
T ss_pred EEEECCCCcchHHhccCCCCCCcccCCCeeEEEEEEccCCCCCcCeeeeeecCCCcceEEecccCCCcceEEEEEEecCC
Confidence 9999999999987433211 1 11111222222 22222122212 222334456777777532 3333333 2333
Q ss_pred CCCCCC-------CchHHHHHHHHHcCCCCChhhHHHHHHHHh------cCCe---eeccCCCCCCCCCCCCCEEE-EeC
Q 010765 261 QKVPSI-------SNGEMANYLKAMVAPQVPPELHEAFVSAVE------RGNI---RTMPNRSMPADPQPTPGALL-MGD 323 (502)
Q Consensus 261 ~~~~~~-------~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~------~~~~---~~~~~~~~~~~~~~~~rv~L-vGD 323 (502)
.....+ +.++..+.+++.+... .+.+.+.+. ..+ ...+ ..++....+..+|..||++| +||
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~GD 315 (430)
T 3ihm_A 238 SDLEVLAHTKYDDDPRAFLDLMLEKLGKH-HPSVAERID-PAEFDLANSSLDILQGGVVPAFRDGHATLNNGKTIIGLGD 315 (430)
T ss_dssp SSSGGGGTSCTTTCHHHHHHHHHHHHHHH-CHHHHTTBC-TTTCEESSSTTSEEEECCCCEEBCSEEECTTSCEEEECGG
T ss_pred CcHHHhccccCCCCHHHHHHHHHHHHHHh-CccHHHHHh-hchhccccCccceeecceeecccccccccCCCCEEEEecC
Confidence 221111 2333333333322211 112211110 011 0111 22333334556788899888 999
Q ss_pred CCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcc-cchhHHHHHHHHH
Q 010765 324 AFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRK-PVASTINTLAGAL 387 (502)
Q Consensus 324 AAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~-p~~~~~~~~a~~~ 387 (502)
|||.++|++|||+|+||+||.+|+++|.... + .++++..|+.+|+ +++......++.+
T Consensus 316 Aah~~~p~~g~G~~~a~~da~~l~~~l~~~~---~---~~~~~~~~~~~r~~~~~~~~~~~~~~~ 374 (430)
T 3ihm_A 316 IQATVDPVLGQGANMASYAAWILGEEILAHS---V---YDLRFSEHLERRRQDRVLCATRWTNFT 374 (430)
T ss_dssp GTEECCGGGCCHHHHHHHHHHHHHHHHHHCS---C---CSHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCchhhhHHHHHHHHHHHHHHHHhcC---C---HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999998652 1 4679999999998 5555555555443
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.90 E-value=3.1e-24 Score=225.10 Aligned_cols=301 Identities=14% Similarity=0.096 Sum_probs=167.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC-ccc-------chhhhccccccceEEEEECCceeeeeccC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD-RIV-------DCVEEIDAQQVLGYALFKDGKSTRLSYPL 123 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~-r~~-------~~l~~l~~~~~~g~~~~~~g~~~~~~~~~ 123 (502)
...+||+|||||++|+++|+.|++.|++|+|||+.+.... +.. +.++.+..... .+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~-------~~--------- 153 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKF-------YG--------- 153 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHH-------CT---------
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCccc-------cc---------
Confidence 4578999999999999999999999999999999865431 111 11111111000 00
Q ss_pred cCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEeC-CCcEEEEecCEEEEecCCCc
Q 010765 124 EKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 124 ~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~--~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S 199 (502)
.+.. .....+++..+.+.|.+.+++. |+++++++ |+++..+ ++....|++... +|+..+++||+||+|||.+|
T Consensus 154 -~~~~-~~~~~~~~~~l~~~L~~~~~~~-gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S 230 (497)
T 2bry_A 154 -RFCT-GTLDHISIRQLQLLLLKVALLL-GVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKF 230 (497)
T ss_dssp -TTTC-TTCCEEEHHHHHHHHHHHHHHT-TCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTC
T ss_pred -cccc-cccccCCHHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCc
Confidence 0000 0123577899999999999886 89999997 9999864 233334555444 66333467999999999999
Q ss_pred hhhhhhcCCCCCCcc-ceeEEEEee-----cCCCCCCceEEEEcC----------CC-cE-EEEecCCCeEEEEEEeCC-
Q 010765 200 NLRRSLCKPKVDVPS-CFVGLVLEN-----CQLPFANHGHVILAD----------PS-PI-LFYPISSTEVRCLVDVPG- 260 (502)
Q Consensus 200 ~vR~~l~~~~~~~~~-~~~~~~~~~-----~~~~~~~~~~~~~~~----------~~-~~-~~~p~~~~~~~~~~~~~~- 260 (502)
.+|+..++...+... ......... ..++. ..+..+..+ .+ +. .++|..++...+......
T Consensus 231 ~~r~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~~-~~G~~~~~~~~~f~~~~~~~Gi~~~~~~~~~~~~~~~~~~~~~~ 309 (497)
T 2bry_A 231 VPEGFTIREMRGKLAIGITANFVNGRTVEETQVPE-ISGVARIYNQKFFQSLLKATGIDLENIVYYKDETHYFVMTAKKQ 309 (497)
T ss_dssp CCTTCEEEEEECSCCEEEEEEEECCCCHHHHTSCC-BCC----CCSSHHHHHHHHHCCCEEEEEEEESSEEEEEEEECHH
T ss_pred ccccccchhhcCceeEeeeeeeeeeccccccchhh-cCceEEecChhhhHhHHhhcCCCcccccccCCCeEEEEeccccc
Confidence 999877654433321 111111110 00111 111111111 01 11 134444443333332110
Q ss_pred ----CC-----CC---------CCCchHHHHH---HHHHcCCCCChhhH---HHHHH---HH-hcCCeeeccCCCCCCCC
Q 010765 261 ----QK-----VP---------SISNGEMANY---LKAMVAPQVPPELH---EAFVS---AV-ERGNIRTMPNRSMPADP 312 (502)
Q Consensus 261 ----~~-----~~---------~~~~~~~~~~---l~~~~~~~~~~~l~---~~~~~---~~-~~~~~~~~~~~~~~~~~ 312 (502)
.. .+ ..+..++... ..++..+...+.+. ..+.. .+ +......|+...+.+++
T Consensus 310 ~~~~~~v~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~a~~ 389 (497)
T 2bry_A 310 CLLRLGVLRQDLSETDQLLGKANVVPEALQRFARAAADFATHGKLGKLEFAQDARGRPDVAAFDFTSMMRAESSARVQEK 389 (497)
T ss_dssp HHHHTTSBSSCCSSHHHHTSTTTBCHHHHHHHHHHHHHHHTTTTTCSCCBCBCTTSSBCEEEEECSEEEEESCSEEEEEE
T ss_pred cccccceeeccccchHhhhhhccCCHHHHHHhhccccccchhhccccchhhhhccCCCCCceeeeEEEEecchhhHHHHh
Confidence 00 00 0111111110 01111111000000 00000 00 11234456777778889
Q ss_pred CCCCC-EEEEeCCCCCCCCCCchhHhHHHHHHHHHHHhcCccCCCCChHHHHHHHHHHHHHcccchhH
Q 010765 313 QPTPG-ALLMGDAFNMRHPLTGGGMTVALSDIVVLRNLLKPLHDFNDAASLGRYLESFYTLRKPVAST 379 (502)
Q Consensus 313 ~~~~r-v~LvGDAAh~~~P~~G~G~n~al~Da~~La~~L~~~~~~~~~~~~~~~l~~Y~~~R~p~~~~ 379 (502)
|..|| ++|+|||+|..+|..|||+|+||+||.+|+|+|+.+. .+.+..+++ .+|++.+..
T Consensus 390 ~~~gRr~~l~Gda~~~~~~p~g~G~n~g~~~a~~l~~~l~~~~---~g~~~~~~l----~~r~~~~~~ 450 (497)
T 2bry_A 390 HGARLLLGLVGDCLVEPFWPLGTGVARGFLAAFDAAWMVKRWA---EGAGPLEVL----AERESLYQL 450 (497)
T ss_dssp TTEEEEEEECGGGTBCCCGGGCCHHHHHHHHHHHHHHHHHHHH---TTCCHHHHH----HHHHHHHTT
T ss_pred cCCcccceEeccccccCcCccccchhhHHHHHHHHHHHHHHHh---CCCCccchh----hhHHHHhhh
Confidence 99998 9999999994443399999999999999999998763 333344555 778776654
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.78 E-value=3.1e-18 Score=170.26 Aligned_cols=280 Identities=13% Similarity=0.117 Sum_probs=139.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc------------------------chhhhccccccceEE
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV------------------------DCVEEIDAQQVLGYA 109 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~------------------------~~l~~l~~~~~~g~~ 109 (502)
++||+|||||++|+++|+.|+++|++|+|+||.+.+..+.. +.++.+... +..
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 78 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ---GHV 78 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH---TSE
T ss_pred CceEEEECCcHHHHHHHHHHHHCCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC---CCe
Confidence 46999999999999999999999999999999865533211 111111110 100
Q ss_pred EEECCceeeeec-cCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEe
Q 010765 110 LFKDGKSTRLSY-PLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAY 187 (502)
Q Consensus 110 ~~~~g~~~~~~~-~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ 187 (502)
....+....... ......... .....+..+.. |.+.+.+ ++++++++ |+++..++++ +.+.+++|+. ..+
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-l~~~l~~--g~~i~~~~~v~~i~~~~~~---~~v~~~~g~~-~~~ 150 (336)
T 1yvv_A 79 AEWTPLLYNFHAGRLSPSPDEQ-VRWVGKPGMSA-ITRAMRG--DMPVSFSCRITEVFRGEEH---WNLLDAEGQN-HGP 150 (336)
T ss_dssp EEECCCEEEESSSBCCCCCTTS-CEEEESSCTHH-HHHHHHT--TCCEECSCCEEEEEECSSC---EEEEETTSCE-EEE
T ss_pred eeccccceeccCcccccCCCCC-ccEEcCccHHH-HHHHHHc--cCcEEecCEEEEEEEeCCE---EEEEeCCCcC-ccc
Confidence 000111000000 000000011 11122222333 3333333 67899998 9999887774 4466777864 335
Q ss_pred cCEEEEecCCCchhhhhhcCC-------CCCCccceeEEEEeecCCCCCCceEEEEcCCCcEEEE------ecCCCe-EE
Q 010765 188 APLTIVCDGCFSNLRRSLCKP-------KVDVPSCFVGLVLENCQLPFANHGHVILADPSPILFY------PISSTE-VR 253 (502)
Q Consensus 188 ad~vI~ADG~~S~vR~~l~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------p~~~~~-~~ 253 (502)
+|+||+|||.+|.+|..-..+ ...+.......+........+.. .++. ..++..++ |...+. ..
T Consensus 151 a~~vV~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~l~~~~~~p~~~~~~~~ 228 (336)
T 1yvv_A 151 FSHVIIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETPLQTPMQ-GCFV-QDSPLDWLARNRSKPERDDTLDT 228 (336)
T ss_dssp ESEEEECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC-EEEE-CSSSEEEEEEGGGSTTCCCSSEE
T ss_pred cCEEEEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCCCCCCCC-eEEe-CCCceeEEEecCcCCCCCCCCcE
Confidence 899999999999988653221 11111111111111111111111 2222 33444333 333332 34
Q ss_pred EEEEeCC---CCCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCC-eeeccCCCCCCCCC--CCCCEEEEeCCCCC
Q 010765 254 CLVDVPG---QKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGN-IRTMPNRSMPADPQ--PTPGALLMGDAFNM 327 (502)
Q Consensus 254 ~~~~~~~---~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~rv~LvGDAAh~ 327 (502)
+++.... ......++++..+.+.+.+...+.....+. ......+ ...++........+ ..+|++|+|||+|.
T Consensus 229 ~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p--~~~~~~rw~~a~~~~~~~~~~~~~~~~rl~laGDa~~g 306 (336)
T 1yvv_A 229 WILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAP--VFSLAHRWLYARPAGAHEWGALSDADLGIYVCGDWCLS 306 (336)
T ss_dssp EEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCC--SEEEEEEEEEEEESSCCCCSCEEETTTTEEECCGGGTT
T ss_pred EEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCC--cEEEccccCccCCCCCCCCCeeecCCCCEEEEecCCCC
Confidence 5555431 112233444554444443332222110000 0000001 11223332222222 34899999999963
Q ss_pred CCCCCchhHhHHHHHHHHHHHhcCccC
Q 010765 328 RHPLTGGGMTVALSDIVVLRNLLKPLH 354 (502)
Q Consensus 328 ~~P~~G~G~n~al~Da~~La~~L~~~~ 354 (502)
.|++.|+.|+..||+.|.+..
T Consensus 307 ------~gv~~a~~sg~~lA~~l~~~~ 327 (336)
T 1yvv_A 307 ------GRVEGAWLSGQEAARRLLEHL 327 (336)
T ss_dssp ------SSHHHHHHHHHHHHHHHHHHT
T ss_pred ------CCHHHHHHHHHHHHHHHHHHh
Confidence 499999999999999987643
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.57 E-value=1.4e-14 Score=146.45 Aligned_cols=278 Identities=14% Similarity=0.122 Sum_probs=147.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--------------------------chhh----h
Q 010765 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--------------------------DCVE----E 99 (502)
Q Consensus 50 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--------------------------~~l~----~ 99 (502)
..+.++||+|||||++|+++|+.|+++|++|+|+|++......+. +.++ .
T Consensus 13 ~~~~~~dvvIIGgG~~Gl~~A~~La~~G~~V~llE~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 92 (382)
T 1ryi_A 13 AMKRHYEAVVIGGGIIGSAIAYYLAKENKNTALFESGTMGGRTTSAAAGMLGAHAECEERDAFFDFAMHSQRLYKGLGEE 92 (382)
T ss_dssp -CCSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTTTHHHHCCCBCCGGGSCSSCSHHHHHHHHHHHHTTTHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHhCCCcEEEEeCCCCCcccchhcCceeccCccCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 335568999999999999999999999999999999854321110 0111 1
Q ss_pred c----ccc---ccceEEEEECCce--------------eeee-------ccC--cCCC---CCCcceeecchHHHHHHHH
Q 010765 100 I----DAQ---QVLGYALFKDGKS--------------TRLS-------YPL--EKFH---ADVSGRSFHNGRFIQRMRE 146 (502)
Q Consensus 100 l----~~~---~~~g~~~~~~g~~--------------~~~~-------~~~--~~~~---~~~~g~~i~r~~l~~~L~~ 146 (502)
+ ... ...+......... ..+. ++. .... ..+.+..++...+.+.|.+
T Consensus 93 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (382)
T 1ryi_A 93 LYALSGVDIRQHNGGMFKLAFSEEDVLQLRQMDDLDSVSWYSKEEVLEKEPYASGDIFGASFIQDDVHVEPYFVCKAYVK 172 (382)
T ss_dssp HHHHHCCCCCCBCCCEEEEESSHHHHHHHHTTTTSTTEEEEEHHHHHHHCTTSCTTCCEEEEETTCCBCCHHHHHHHHHH
T ss_pred HHHhhCCCcCeeecceEEEEeCHHHHHHHHHHhhcCCeEEECHHHHHHhCCCCCcccceEEEeCCCeEEcHHHHHHHHHH
Confidence 1 000 0111111111100 0000 010 0000 0012235667889999999
Q ss_pred HHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch-hhhhhcCCCCCCccceeEEEEe-e
Q 010765 147 KAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSLCKPKVDVPSCFVGLVLE-N 223 (502)
Q Consensus 147 ~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~-vR~~l~~~~~~~~~~~~~~~~~-~ 223 (502)
.+++. |++++.++ |+++..+++++ + +.+.+| +++||.||.|+|.+|. +.+.++...+-.+ ..+..+. .
T Consensus 173 ~~~~~-g~~i~~~~~v~~i~~~~~~~-~--v~~~~g---~~~a~~vV~A~G~~s~~l~~~~~~~~~~~~--~~g~~~~~~ 243 (382)
T 1ryi_A 173 AAKML-GAEIFEHTPVLHVERDGEAL-F--IKTPSG---DVWANHVVVASGVWSGMFFKQLGLNNAFLP--VKGECLSVW 243 (382)
T ss_dssp HHHHT-TCEEETTCCCCEEECSSSSE-E--EEETTE---EEEEEEEEECCGGGTHHHHHHTTCCCCCEE--EEEEEEEEE
T ss_pred HHHHC-CCEEEcCCcEEEEEEECCEE-E--EEcCCc---eEEcCEEEECCChhHHHHHHhcCCCCceec--cceEEEEEC
Confidence 99887 89999987 99998777654 3 345555 4679999999999987 7777765332222 2232222 1
Q ss_pred cCCCCCCceEEEEcCCCcEEEEecCCCeEEEEEEeCCCCCCCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCeeec
Q 010765 224 CQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPGQKVPSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNIRTM 303 (502)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 303 (502)
...+... ..++.+ ..++.|..++...+...............+..+.+.+.+...+| .+. .......|
T Consensus 244 ~~~~~~~--~~~~~~--~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~~p-~l~-------~~~~~~~w 311 (382)
T 1ryi_A 244 NDDIPLT--KTLYHD--HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKAKTMLP-AIQ-------NMKVDRFW 311 (382)
T ss_dssp CCSSCCC--SEEEET--TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHHHHHCG-GGG-------GSEEEEEE
T ss_pred CCCCCcc--ceEEcC--CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHHHHhCC-CcC-------CCceeeEE
Confidence 1111111 122322 56778877664333221111111111122222222222111111 111 00011111
Q ss_pred cCCCCCCCCCCCCCEEEEeCCC-----CCCCCCCchhHhHHHHHHHHHHHhcCc
Q 010765 304 PNRSMPADPQPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVVLRNLLKP 352 (502)
Q Consensus 304 ~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 352 (502)
.- ..++..++..++|++. ....+++|.|+..|...+..+++.|..
T Consensus 312 ~g----~~~~t~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~~ 361 (382)
T 1ryi_A 312 AG----LRPGTKDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIMN 361 (382)
T ss_dssp EE----EEEECSSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHTT
T ss_pred EE----ecccCCCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHhC
Confidence 10 0112345667788763 345778999999999999999999864
No 32
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.54 E-value=6e-14 Score=142.86 Aligned_cols=195 Identities=14% Similarity=0.108 Sum_probs=104.8
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc-hhhhhhcCCCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKPKVD 211 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S-~vR~~l~~~~~~ 211 (502)
.++...+...|.+.+++. |+++++++ |+++..+++++.+|+ ..+| +++||.||.|+|.+| .+++.++...+.
T Consensus 170 ~~~~~~~~~~l~~~~~~~-g~~i~~~~~v~~i~~~~~~~~~v~--~~~g---~~~a~~vV~a~G~~s~~l~~~~g~~~~~ 243 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEM-GVDIIQNCEVTGFIKDGEKVTGVK--TTRG---TIHAGKVALAGAGHSSVLAEMAGFELPI 243 (405)
T ss_dssp BCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEEEEE--ETTC---CEEEEEEEECCGGGHHHHHHHHTCCCCE
T ss_pred cCCHHHHHHHHHHHHHHC-CCEEEcCCeEEEEEEeCCEEEEEE--eCCc---eEECCEEEECCchhHHHHHHHcCCCCCc
Confidence 345568889999999887 89999987 999988777655554 4566 356999999999998 688888765432
Q ss_pred CccceeEEEEeecCCCCCCceEEEEcCCCcEEEEecCCCeEEEEEEeCC-CCCC-CCCchHHHHHHHHHcCCCCChhhHH
Q 010765 212 VPSCFVGLVLENCQLPFANHGHVILADPSPILFYPISSTEVRCLVDVPG-QKVP-SISNGEMANYLKAMVAPQVPPELHE 289 (502)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~l~~~~~~~~~~~l~~ 289 (502)
.+.....+... ..+.. ...++.......++.|..++.+.+...... .... ..+. +..+.+.+.+...+| .+
T Consensus 244 ~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~-~~~~~l~~~~~~~~p-~l-- 316 (405)
T 2gag_B 244 QSHPLQALVSE--LFEPV-HPTVVMSNHIHVYVSQAHKGELVMGAGIDSYNGYGQRGAF-HVIQEQMAAAVELFP-IF-- 316 (405)
T ss_dssp EEEEEEEEEEE--EBCSC-CCSEEEETTTTEEEEECTTSEEEEEEEECSSCCCSSCCCT-HHHHHHHHHHHHHCG-GG--
T ss_pred cccceeEEEec--CCccc-cCceEEeCCCcEEEEEcCCCcEEEEeccCCCCccccCCCH-HHHHHHHHHHHHhCC-cc--
Confidence 22211111221 11111 112233344567778877775554443321 1111 1222 222222221111111 11
Q ss_pred HHHHHHhcCCe-eeccCCCCCCCCCCCCCEEEEeCCC--C--CCCCCCchhHhHHHHHHHHHHHhcC
Q 010765 290 AFVSAVERGNI-RTMPNRSMPADPQPTPGALLMGDAF--N--MRHPLTGGGMTVALSDIVVLRNLLK 351 (502)
Q Consensus 290 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~rv~LvGDAA--h--~~~P~~G~G~n~al~Da~~La~~L~ 351 (502)
....+ ..|.- ..++..++..++|++. + ...-+.|.|+..|..-+..|+..|.
T Consensus 317 ------~~~~~~~~w~g----~~~~t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 317 ------ARAHVLRTWGG----IVDTTMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp ------GGCEECEEEEE----EEEEETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHH
T ss_pred ------ccCCcceEEee----ccccCCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHh
Confidence 10111 11110 0112356788889864 2 2233455677777777777777665
No 33
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.53 E-value=6.3e-13 Score=134.27 Aligned_cols=277 Identities=16% Similarity=0.176 Sum_probs=144.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----------------------chhhhcccc-----c
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----------------------DCVEEIDAQ-----Q 104 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----------------------~~l~~l~~~-----~ 104 (502)
.++||+|||||++|+++|+.|+++|++|+|+|++......+. +.++.+... .
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~~V~lle~~~~~~gas~~~~g~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~ 83 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGEEVTVIEKRFIGSGSTFRCGTGIRQQFNDEANVRVMKRSVELWKKYSEEYGFSFK 83 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSTTCSHHHHCCCCCCCCCSSHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCCCCccccccCeeeecCCChHHHHHHHHHHHHHHHHHHHhCCCee
Confidence 468999999999999999999999999999999843221100 112222110 0
Q ss_pred cceEEEEECCce------------------e-eee-------ccCcC---CC---CCCcceeecchHHHHHHHHHHHcCC
Q 010765 105 VLGYALFKDGKS------------------T-RLS-------YPLEK---FH---ADVSGRSFHNGRFIQRMREKAASLP 152 (502)
Q Consensus 105 ~~g~~~~~~g~~------------------~-~~~-------~~~~~---~~---~~~~g~~i~r~~l~~~L~~~a~~~~ 152 (502)
..+......... . .+. ++.-. .. ..+....++...+.+.|.+.+++.
T Consensus 84 ~~g~l~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~- 162 (382)
T 1y56_B 84 QTGYLFLLYDDEEVKTFKRNIEIQNKFGVPTKLITPEEAKEIVPLLDISEVIAASWNPTDGKADPFEATTAFAVKAKEY- 162 (382)
T ss_dssp CCCEEEEECSHHHHHHHHHHHHHHHHTTCCCEEECHHHHHHSSTTCCCTTCCEEEEETTCCEECHHHHHHHHHHHHHHT-
T ss_pred ccceEEEEeCHHHHHHHHHHHHHHHhcCCCcEEeCHHHHHHhCCCCCcccceEEEEcCCCeeECHHHHHHHHHHHHHHC-
Confidence 011111111000 0 000 00000 00 011123466788999999999887
Q ss_pred CeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc-hhhhhhcCC--CCCCccceeEEEEeecCCCC
Q 010765 153 NVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKP--KVDVPSCFVGLVLENCQLPF 228 (502)
Q Consensus 153 ~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S-~vR~~l~~~--~~~~~~~~~~~~~~~~~~~~ 228 (502)
|+++++++ |+++..+++++.+|+ +.+| +++||.||.|+|.+| .+.+.++.. .+-.+ ..+........+.
T Consensus 163 Gv~i~~~~~v~~i~~~~~~v~gv~--~~~g---~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~--~~g~~~~~~~~~~ 235 (382)
T 1y56_B 163 GAKLLEYTEVKGFLIENNEIKGVK--TNKG---IIKTGIVVNATNAWANLINAMAGIKTKIPIEP--YKHQAVITQPIKR 235 (382)
T ss_dssp TCEEECSCCEEEEEESSSBEEEEE--ETTE---EEECSEEEECCGGGHHHHHHHHTCCSCCCCEE--EEEEEEEECCCST
T ss_pred CCEEECCceEEEEEEECCEEEEEE--ECCc---EEECCEEEECcchhHHHHHHHcCCCcCcCCCe--eEeEEEEEccCCc
Confidence 89999987 999988777665554 4555 367999999999998 567776654 22222 2222222111111
Q ss_pred CCceEEEEcCC-CcEEEEecCCCeEEEEE-EeC-CCCC-CCCCchHHHHHHHHHcCCCCChhhHHHHHHHHhcCCe-eec
Q 010765 229 ANHGHVILADP-SPILFYPISSTEVRCLV-DVP-GQKV-PSISNGEMANYLKAMVAPQVPPELHEAFVSAVERGNI-RTM 303 (502)
Q Consensus 229 ~~~~~~~~~~~-~~~~~~p~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~-~~~ 303 (502)
......++... ...++.|..++ ..+.. ... .... ...+.+... .+.+.+...+| .+ ...++ ..|
T Consensus 236 ~~~~~~~~~~~~~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~p-~l--------~~~~~~~~~ 304 (382)
T 1y56_B 236 GTINPMVISFKYGHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLR-EVSYYFTKIIP-AL--------KNLLILRTW 304 (382)
T ss_dssp TSSCSEEEESTTTTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHH-HHHHHHHHHCG-GG--------GGSEEEEEE
T ss_pred ccCCCeEEecCCCeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHH-HHHHHHHHhCC-Cc--------CCCCceEEE
Confidence 11112333333 46677787666 33332 111 1111 112222222 22221111111 11 11111 111
Q ss_pred cCCCCCCCCCCCCCEEEEeCCC-----CCCCCCCchhHhHHHHHHHHHHHhcCc
Q 010765 304 PNRSMPADPQPTPGALLMGDAF-----NMRHPLTGGGMTVALSDIVVLRNLLKP 352 (502)
Q Consensus 304 ~~~~~~~~~~~~~rv~LvGDAA-----h~~~P~~G~G~n~al~Da~~La~~L~~ 352 (502)
.- . .+...++..++|... .....++|.|+..+..-+..+++.|..
T Consensus 305 ~g-~---r~~t~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 305 AG-Y---YAKTPDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp EE-E---EEECTTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred Ee-c---cccCCCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 10 0 011234555667654 223457789999999999999988864
No 34
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.50 E-value=4.6e-13 Score=127.45 Aligned_cols=39 Identities=28% Similarity=0.572 Sum_probs=35.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
++||+||||||+||++|+.|+++|++|+|+||++.+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek~~~~GG~ 40 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGHQVHLFDKSRGSGGR 40 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGG
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCc
Confidence 589999999999999999999999999999999776544
No 35
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.49 E-value=1.2e-12 Score=138.95 Aligned_cols=74 Identities=18% Similarity=0.192 Sum_probs=62.5
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc-hhhhhhcCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS-NLRRSLCKP 208 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S-~vR~~l~~~ 208 (502)
.++..++...|.+.+.+. |++++.++ |+++..+++++.+|++.+ .+|+..+++||.||.|+|.+| .+++.++..
T Consensus 166 ~vd~~~l~~~L~~~a~~~-G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~ 242 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVAR-GAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSK 242 (561)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCC
T ss_pred eEcHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCC
Confidence 566788999999999888 89999987 999999988888888876 356667788999999999999 678877654
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.48 E-value=7.4e-13 Score=133.45 Aligned_cols=149 Identities=15% Similarity=0.148 Sum_probs=94.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc------------------------chhhhcccc----
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV------------------------DCVEEIDAQ---- 103 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~------------------------~~l~~l~~~---- 103 (502)
+.+.||+|||||++||++|+.|+ +|++|+|+|+++....... +.++++...
T Consensus 7 ~~~~dv~IIGaGi~Gls~A~~La-~G~~V~vlE~~~~~g~~as~~~~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 85 (381)
T 3nyc_A 7 PIEADYLVIGAGIAGASTGYWLS-AHGRVVVLEREAQPGYHSTGRSAAHYTVAYGTPQVRALTAASRAFFDNPPAGFCEH 85 (381)
T ss_dssp EEECSEEEECCSHHHHHHHHHHT-TTSCEEEECSSSSTTSSGGGSCCCEECSSSSCHHHHHHHHHHHHHHHSCCTTSCSS
T ss_pred CCcCCEEEECCcHHHHHHHHHHh-CCCCEEEEECCCCccccccccccceeecccCCHHHHHHHHHHHHHHHHhhhhhCCc
Confidence 34679999999999999999999 5999999999854321110 222322111
Q ss_pred ---ccceEEEEECCce-ee----------eeccC------------cCCC--------CCCcceeecchHHHHHHHHHHH
Q 010765 104 ---QVLGYALFKDGKS-TR----------LSYPL------------EKFH--------ADVSGRSFHNGRFIQRMREKAA 149 (502)
Q Consensus 104 ---~~~g~~~~~~g~~-~~----------~~~~~------------~~~~--------~~~~g~~i~r~~l~~~L~~~a~ 149 (502)
...+.......+. .. ...+. .... ..+.+..++...+...|.+.++
T Consensus 86 ~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~a~ 165 (381)
T 3nyc_A 86 PLLSPRPEMVVDFSDDPEELRRQYESGKALVPQMRLLDAEQACSIVPVLRRDKVFGATYDPTGADIDTDALHQGYLRGIR 165 (381)
T ss_dssp CSEEECCEEEECSSCCHHHHHHHHHHHHHHCTTCEEECHHHHHHHSTTBCGGGCCCEEEETTCEEECHHHHHHHHHHHHH
T ss_pred ccccccceEEEechHHHHHHHHHHHHHHHcCCCcEEeCHHHHHHhCCCcccccceEEEEcCCCceECHHHHHHHHHHHHH
Confidence 0011111111110 00 00000 0000 0112235677889999999999
Q ss_pred cCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc-hhhhhhcCC
Q 010765 150 SLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSLCKP 208 (502)
Q Consensus 150 ~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S-~vR~~l~~~ 208 (502)
+. |+++++++ |+++..++++ +.+.+++| +++||.||.|+|.+| .+.+.++..
T Consensus 166 ~~-Gv~i~~~~~V~~i~~~~~~---~~V~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 219 (381)
T 3nyc_A 166 RN-QGQVLCNHEALEIRRVDGA---WEVRCDAG---SYRAAVLVNAAGAWCDAIAGLAGVR 219 (381)
T ss_dssp HT-TCEEESSCCCCEEEEETTE---EEEECSSE---EEEESEEEECCGGGHHHHHHHHTCC
T ss_pred HC-CCEEEcCCEEEEEEEeCCe---EEEEeCCC---EEEcCEEEECCChhHHHHHHHhCCC
Confidence 98 89999987 9999988775 44556666 467999999999998 466666654
No 37
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.47 E-value=1.1e-12 Score=137.49 Aligned_cols=210 Identities=13% Similarity=0.065 Sum_probs=109.0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCch-hhhh-hcCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSN-LRRS-LCKPK 209 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~-vR~~-l~~~~ 209 (502)
.++..++...|.+.+.+. |+++++++ |+++..++ ++.+|++.+ .+|+..+++||.||.|+|.+|. +++. ++...
T Consensus 145 ~v~~~~l~~~l~~~a~~~-Gv~i~~~~~V~~l~~~~-~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~ 222 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRK-GGEVLTRTRATSARREN-GLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPS 222 (501)
T ss_dssp EECHHHHHHHHHHHHHHT-TCEEECSEEEEEEEEET-TEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEEcCcEEEEEEEeC-CEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCc
Confidence 367788999999999988 89999987 99998876 455676655 4677667889999999999986 4553 44321
Q ss_pred CCCccceeEEEEe-ecCCCCCCceEEEEcC-CCcEEEEecCCCeEEEEEEeCC-----C-CCCCCCchHHHHHHHHHcCC
Q 010765 210 VDVPSCFVGLVLE-NCQLPFANHGHVILAD-PSPILFYPISSTEVRCLVDVPG-----Q-KVPSISNGEMANYLKAMVAP 281 (502)
Q Consensus 210 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~-----~-~~~~~~~~~~~~~l~~~~~~ 281 (502)
...-....+..+. +...+. ....++-.+ +..++++|..++. +.+.... + ..+..+.++. +++.+.+..
T Consensus 223 ~~~i~p~rG~~~~~~~~~~~-~~~~~~~~~dg~~~~~~P~~~g~--~~iG~t~~~~~~~~~~~~~~~~~~-~~l~~~~~~ 298 (501)
T 2qcu_A 223 PYGIRLIKGSHIVVPRVHTQ-KQAYILQNEDKRIVFVIPWMDEF--SIIGTTDVEYKGDPKAVKIEESEI-NYLLNVYNT 298 (501)
T ss_dssp SSCBCCEEEEEEEEECSSSC-SCEEEEECTTSCEEEEEEETTTE--EEEECCCEECCSCGGGCCCCHHHH-HHHHHHHHH
T ss_pred ccccccceeEEEEECCCCCC-ceEEEeecCCCCEEEEEEcCCCc--EEEcCCCCCCCCCcCCCCCCHHHH-HHHHHHHHH
Confidence 1111112222221 222222 222222222 3457788987663 3332110 1 1122233333 222222211
Q ss_pred CCChhhHHHHHHHHhcCCeeeccCCCC--C-CCCCCCCCEEE--EeCCCCCCCCCCchhHhHHHHHHHHHHHhcCc
Q 010765 282 QVPPELHEAFVSAVERGNIRTMPNRSM--P-ADPQPTPGALL--MGDAFNMRHPLTGGGMTVALSDIVVLRNLLKP 352 (502)
Q Consensus 282 ~~~~~l~~~~~~~~~~~~~~~~~~~~~--~-~~~~~~~rv~L--vGDAAh~~~P~~G~G~n~al~Da~~La~~L~~ 352 (502)
.+|..+... .+...+.-..|...- + ..+...+.++. .+|..|.+-..+|.|++++-.=|..++..+..
T Consensus 299 ~~p~~l~~~---~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~~~~~~ 371 (501)
T 2qcu_A 299 HFKKQLSRD---DIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHALEKLTP 371 (501)
T ss_dssp HBSSCCCGG---GCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHHHHHGG
T ss_pred hcCCCCCcc---cEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHHHHHHH
Confidence 111011000 000001111122111 1 11122345666 57776777777888888877666666666543
No 38
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.46 E-value=6.8e-13 Score=132.95 Aligned_cols=73 Identities=12% Similarity=0.062 Sum_probs=56.8
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc-hhhhhh-cCC
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRRSL-CKP 208 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S-~vR~~l-~~~ 208 (502)
..++...+.+.|.+.+++. |+++++++ |+++..++++. +.+...+|+..+++||.||.|+|.+| .+.+.+ +.+
T Consensus 145 ~~~~~~~~~~~l~~~~~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~ 220 (369)
T 3dme_A 145 GIVDSHALMLAYQGDAESD-GAQLVFHTPLIAGRVRPEGG--FELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIP 220 (369)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSS--EEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSC
T ss_pred EEECHHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCce--EEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCC
Confidence 3466778999999999988 89999887 99999876642 23456677655678999999999998 566666 654
No 39
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.44 E-value=2e-12 Score=140.65 Aligned_cols=67 Identities=7% Similarity=0.097 Sum_probs=53.4
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch-hhhhh
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSL 205 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~-vR~~l 205 (502)
..++...+...|.+.+++. |+++++++ |+++..++++ +.+.+.+|.+ ++||.||.|+|.+|. +.+..
T Consensus 412 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~--i~Ad~VVlAtG~~s~~l~~~~ 480 (676)
T 3ps9_A 412 GWLCPAELTRNVLELAQQQ-GLQIYYQYQLQNFSRKDDC---WLLNFAGDQQ--ATHSVVVLANGHQISRFSQTS 480 (676)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECCGGGGGCSTTTT
T ss_pred eeeCHHHHHHHHHHHHHhC-CCEEEeCCeeeEEEEeCCe---EEEEECCCCE--EECCEEEECCCcchhcccccc
Confidence 4566788999999999988 89999998 9999988885 4456667765 569999999999986 33433
No 40
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.44 E-value=9.9e-13 Score=129.26 Aligned_cols=145 Identities=23% Similarity=0.247 Sum_probs=93.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceee---eeccCcCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTR---LSYPLEKFH 127 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~---~~~~~~~~~ 127 (502)
.++||+|||||++||++|+.|+++ |++|+|+|+........+ ........... ....... +..+....
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~~~~GGg~~-----~~g~~~~~~~~-~~~~~~~L~~~Gv~~~~~- 150 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAGVAPGGGAW-----LGGQLFSAMVM-RKPADVFLDEVGVPYEDE- 150 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESSSSCCTTTT-----CCBTTCCCEEE-ETTTHHHHHHHTCCCEEC-
T ss_pred CcCCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCCCccCCccc-----cCCccchhhhc-chHHHHHHHHcCCccccc-
Confidence 468999999999999999999997 999999999865543221 00000000000 0000000 00000000
Q ss_pred CCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-----------------C--eEEEEEEEe----CCC--
Q 010765 128 ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-----------------G--TIKGVQYKT----KDG-- 181 (502)
Q Consensus 128 ~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~-----------------~--~v~~v~~~~----~~G-- 181 (502)
.......+...+.+.|.+.+.+++++++++++ ++++..++ + ++.||.+.. .+|
T Consensus 151 -G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv~~~~~v~~~g~~ 229 (344)
T 3jsk_A 151 -GDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVVTNWTLVSMHHDD 229 (344)
T ss_dssp -SSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEEEEEHHHHTTSSS
T ss_pred -CCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEEeeeeeeeccCCc
Confidence 01112234567889999999987799999998 89988765 2 777887642 233
Q ss_pred ----cEEEEecCEEEEecCCCchhhhhh
Q 010765 182 ----QELRAYAPLTIVCDGCFSNLRRSL 205 (502)
Q Consensus 182 ----~~~~v~ad~vI~ADG~~S~vR~~l 205 (502)
+..+++|++||+|||..|++++.+
T Consensus 230 ~~~~d~~~i~Ak~VV~ATG~~s~v~~~~ 257 (344)
T 3jsk_A 230 QSAMDPNTINAPVIISTTGHDGPFGAFS 257 (344)
T ss_dssp SSCCBCEEEECSEEEECCCSSSSSSCHH
T ss_pred ccccCceEEEcCEEEECCCCCchhhHHH
Confidence 345688999999999999976655
No 41
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.42 E-value=1.5e-12 Score=126.22 Aligned_cols=141 Identities=20% Similarity=0.233 Sum_probs=94.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC-CCeEEEEecCCCCCCccc---chhhhccccccceEEEEECCce--eeeeccCcCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVTEPDRIV---DCVEEIDAQQVLGYALFKDGKS--TRLSYPLEKF 126 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~-G~~v~lvEr~~~~~~r~~---~~l~~l~~~~~~g~~~~~~g~~--~~~~~~~~~~ 126 (502)
.++||+|||||++|+++|+.|+++ |.+|+|+||.+....... ..+..+ .+...... ..+..+...
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~~~~gg~~~~~~~~~~~~--------~~~~~~~~~l~~~G~~~~~- 108 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSVSPGGGAWLGGQLFSAM--------IVRKPAHLFLDEIGVAYDE- 108 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSSSCCTTTTCCSTTCCCE--------EEETTTHHHHHHHTCCCEE-
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCCeEEEEECCCCCCCceecCCcchHHH--------HcCcHHHHHHHHcCCCccc-
Confidence 457999999999999999999997 999999999876543221 111110 00000000 000000000
Q ss_pred CCCCcce--eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-------C---CcEEEEecCEEEE
Q 010765 127 HADVSGR--SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-------D---GQELRAYAPLTIV 193 (502)
Q Consensus 127 ~~~~~g~--~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-------~---G~~~~v~ad~vI~ 193 (502)
..++ ..++..+...|.+.+.+..|++++.++ |+++..+++++.+|.+... + |+..+++||+||.
T Consensus 109 ---~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~i~ad~VV~ 185 (284)
T 1rp0_A 109 ---QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNVMEAKIVVS 185 (284)
T ss_dssp ---CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEEEEEEEEEE
T ss_pred ---CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEEEECCEEEE
Confidence 0112 225677888888888775689999997 9999988888878877531 2 3445678999999
Q ss_pred ecCCCchhhhhh
Q 010765 194 CDGCFSNLRRSL 205 (502)
Q Consensus 194 ADG~~S~vR~~l 205 (502)
|+|.+|.++...
T Consensus 186 AtG~~s~~~~~~ 197 (284)
T 1rp0_A 186 SCGHDGPFGATG 197 (284)
T ss_dssp CCCSSSTTTTHH
T ss_pred CCCCchHHHHHH
Confidence 999999987654
No 42
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.40 E-value=7.1e-12 Score=126.70 Aligned_cols=146 Identities=23% Similarity=0.261 Sum_probs=90.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC--Cccc------------------------chhhhcccc----
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP--DRIV------------------------DCVEEIDAQ---- 103 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~--~r~~------------------------~~l~~l~~~---- 103 (502)
++||+|||||++|+++|+.|+++|++|+|+|++.... ..+. +.++.+...
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~~V~vie~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~~ 82 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGVKTLLVDAFDPPHTNGSHHGDTRIIRHAYGEGREYVPLALRSQELWYELEKETHHK 82 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSCSSCSSSSSCSSEEEECSSCTTCGGGHHHHHHHHHHHHHHHHHCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCCCCCCCCCCcchhhhhhhcCCchHHHHHHHHHHHHHHHHHHhCCc
Confidence 5799999999999999999999999999999985433 1110 112222110
Q ss_pred --ccceEEEEECC-ce-----------------eeee-------ccCcCCCC------CCcceeecchHHHHHHHHHHHc
Q 010765 104 --QVLGYALFKDG-KS-----------------TRLS-------YPLEKFHA------DVSGRSFHNGRFIQRMREKAAS 150 (502)
Q Consensus 104 --~~~g~~~~~~g-~~-----------------~~~~-------~~~~~~~~------~~~g~~i~r~~l~~~L~~~a~~ 150 (502)
...+....... .. ..+. +|.-.... .+....++...+.+.|.+.+++
T Consensus 83 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 162 (389)
T 2gf3_A 83 IFTKTGVLVFGPKGESAFVAETMEAAKEHSLTVDLLEGDEINKRWPGITVPENYNAIFEPNSGVLFSENCIRAYRELAEA 162 (389)
T ss_dssp CEECCCEEEEEETTCCHHHHHHHHHHHHTTCCCEEEETHHHHHHSTTCCCCTTEEEEEETTCEEEEHHHHHHHHHHHHHH
T ss_pred ceeecceEEEcCCCchHHHHHHHHHHHHcCCCcEEcCHHHHHHhCCCcccCCCceEEEeCCCcEEeHHHHHHHHHHHHHH
Confidence 01111111111 00 0000 01000000 1112345667899999999998
Q ss_pred CCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch-hhhhhc
Q 010765 151 LPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN-LRRSLC 206 (502)
Q Consensus 151 ~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~-vR~~l~ 206 (502)
. |+++++++ |+++..++++ +.+.+.+| +++||.||.|+|.+|. +.+.++
T Consensus 163 ~-Gv~i~~~~~v~~i~~~~~~---~~v~~~~g---~~~a~~vV~A~G~~~~~l~~~~g 213 (389)
T 2gf3_A 163 R-GAKVLTHTRVEDFDISPDS---VKIETANG---SYTADKLIVSMGAWNSKLLSKLN 213 (389)
T ss_dssp T-TCEEECSCCEEEEEECSSC---EEEEETTE---EEEEEEEEECCGGGHHHHGGGGT
T ss_pred C-CCEEEcCcEEEEEEecCCe---EEEEeCCC---EEEeCEEEEecCccHHHHhhhhc
Confidence 8 89999987 9999887664 33455555 3679999999999975 444454
No 43
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.39 E-value=4.7e-12 Score=118.90 Aligned_cols=132 Identities=25% Similarity=0.269 Sum_probs=89.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
+++||+|||||++|+.+|+.|++.|.+|+|+|+...... +.+...+ .++ ..+.. .-.+. + ..+
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~~v~lie~~~~~~G--~~~~~~~-----~~~---~~~~~-~~~~~--d----~~g 64 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGVRVGLLTQSLDAVM--MPFLPPK-----PPF---PPGSL-LERAY--D----PKD 64 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTT--CCSSCCC-----SCC---CTTCH-HHHHC--C----TTC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCcCC--cccCccc-----ccc---chhhH-Hhhhc--c----CCC
Confidence 358999999999999999999999999999999842111 0000000 000 00000 00000 0 011
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhcC
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLCK 207 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~~ 207 (502)
. ++..+...|.+.+++.++++++.++|+++..+++++.+|. ..+|++ ++||+||.|+|.+|..+..++.
T Consensus 65 ~--~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~--~~~g~~--i~a~~VV~A~G~~s~~~~~~G~ 133 (232)
T 2cul_A 65 E--RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVR--TWEGPP--ARGEKVVLAVGSFLGARLFLGG 133 (232)
T ss_dssp C--CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSCC--EECSEEEECCTTCSSCEEEETT
T ss_pred C--CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEE--ECCCCE--EECCEEEECCCCChhhceecCC
Confidence 1 5678899999999987789998766999988888765554 466764 5699999999999998876654
No 44
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.39 E-value=4e-12 Score=138.43 Aligned_cols=62 Identities=10% Similarity=-0.011 Sum_probs=49.4
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc-EEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQ-ELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~-~~~v~ad~vI~ADG~~S~ 200 (502)
..++...+...|.+.+++. |+++++++ |+++..++++ +.+.+.+|+ . ++||.||.|+|.+|.
T Consensus 407 g~v~p~~l~~aL~~~a~~~-Gv~i~~~t~V~~l~~~~~~---v~V~t~~G~~~--i~Ad~VVlAtG~~s~ 470 (689)
T 3pvc_A 407 GWLCPSDLTHALMMLAQQN-GMTCHYQHELQRLKRIDSQ---WQLTFGQSQAA--KHHATVILATGHRLP 470 (689)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESCCEEEEEECSSS---EEEEEC-CCCC--EEESEEEECCGGGTT
T ss_pred eEECHHHHHHHHHHHHHhC-CCEEEeCCeEeEEEEeCCe---EEEEeCCCcEE--EECCEEEECCCcchh
Confidence 3456788999999999988 89999998 9999988775 345566665 4 559999999999985
No 45
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.37 E-value=2.4e-12 Score=131.51 Aligned_cols=140 Identities=24% Similarity=0.342 Sum_probs=84.4
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----ch-hhhccccccceEEEEECC-ceee---e
Q 010765 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----DC-VEEIDAQQVLGYALFKDG-KSTR---L 119 (502)
Q Consensus 50 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----~~-l~~l~~~~~~g~~~~~~g-~~~~---~ 119 (502)
|.+.++||+|||||++|+++|+.|+++|.+|+|+||.+....++. .+ +...... ... +.... .... .
T Consensus 23 M~~~~~dViIIGgG~AGl~aA~~La~~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~-~~~--~~~~~~~~~~~~l~ 99 (417)
T 3v76_A 23 MVAEKQDVVIIGAGAAGMMCAIEAGKRGRRVLVIDHARAPGEKIRISGGGRCNFTNIHAS-PRN--FLSGNPHFCKSALA 99 (417)
T ss_dssp -----CCEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCS-GGG--EEESSTTTTHHHHH
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCCCCceeEEcCCCceeccCCCCC-HHH--HhhcCHHHHHHHHH
Confidence 445679999999999999999999999999999999976543220 00 0000000 000 00000 0000 0
Q ss_pred eccC-----------cCCCCCCcce---eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEE
Q 010765 120 SYPL-----------EKFHADVSGR---SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQEL 184 (502)
Q Consensus 120 ~~~~-----------~~~~~~~~g~---~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~ 184 (502)
.+.. ........+. ......+.+.|.+.+++. |++++.++ |+++..+++. +.+.+.+|
T Consensus 100 ~~~~~~~~~~~~~~Gi~~~~~~~g~~~~~~~~~~l~~~L~~~l~~~-Gv~i~~~~~V~~i~~~~~~---~~V~~~~g--- 172 (417)
T 3v76_A 100 RYRPQDFVALVERHGIGWHEKTLGQLFCDHSAKDIIRMLMAEMKEA-GVQLRLETSIGEVERTASG---FRVTTSAG--- 172 (417)
T ss_dssp HSCHHHHHHHHHHTTCCEEECSTTEEEESSCHHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEEEETTE---
T ss_pred hcCHHHHHHHHHHcCCCcEEeeCCEEeeCCCHHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEEEECCc---
Confidence 0000 0000001111 234567888999998887 89999998 9999888774 45666666
Q ss_pred EEecCEEEEecCCCc
Q 010765 185 RAYAPLTIVCDGCFS 199 (502)
Q Consensus 185 ~v~ad~vI~ADG~~S 199 (502)
+++||.||.|+|.+|
T Consensus 173 ~i~ad~VIlAtG~~S 187 (417)
T 3v76_A 173 TVDAASLVVASGGKS 187 (417)
T ss_dssp EEEESEEEECCCCSS
T ss_pred EEEeeEEEECCCCcc
Confidence 467999999999999
No 46
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.36 E-value=2.4e-12 Score=137.03 Aligned_cols=147 Identities=17% Similarity=0.209 Sum_probs=98.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----------chhhhcccc-------------c---
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----------DCVEEIDAQ-------------Q--- 104 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----------~~l~~l~~~-------------~--- 104 (502)
+.++||||||||++||++|+.|++.|.+|+||||.+.....+. ...+..... .
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~~~ 198 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGRQQ 198 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 4568999999999999999999999999999999876543211 000000000 0
Q ss_pred ---------------------cceEEEEECCceeeeeccCcC-CCC--CCcceeecchHHHHHHHHHHHcCCCeEEEece
Q 010765 105 ---------------------VLGYALFKDGKSTRLSYPLEK-FHA--DVSGRSFHNGRFIQRMREKAASLPNVRLEQGT 160 (502)
Q Consensus 105 ---------------------~~g~~~~~~g~~~~~~~~~~~-~~~--~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~ 160 (502)
..|..+ ..+...... ... .+.+..+....+...|.+.+++. |+++++++
T Consensus 199 ~~~~~~~~~~~~~~~~i~~l~~~Gv~~------~~~~~~~g~~~~r~~~~~~~~~~~~~l~~~L~~~~~~~-gv~i~~~~ 271 (566)
T 1qo8_A 199 NDIKLVTILAEQSADGVQWLESLGANL------DDLKRSGGARVDRTHRPHGGKSSGPEIIDTLRKAAKEQ-GIDTRLNS 271 (566)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCC------CEEECCTTCSSCCEEECSSSSCHHHHHHHHHHHHHHHT-TCCEECSE
T ss_pred CCHHHHHHHHhccHHHHHHHHhcCCcc------ccccccCCCCCCceeecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCC
Confidence 000000 000000000 000 00011134567889999999887 89999998
Q ss_pred -EEEEEeeC-CeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhh
Q 010765 161 -VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 205 (502)
Q Consensus 161 -v~~~~~~~-~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l 205 (502)
|++++.++ +++.+|.+.+.+|+..+++||.||.|+|.+|..|+.+
T Consensus 272 ~v~~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~~~~~ 318 (566)
T 1qo8_A 272 RVVKLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMNKEMI 318 (566)
T ss_dssp EEEEEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTCHHHH
T ss_pred EEEEEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccCHHHH
Confidence 99999887 8888898887788776788999999999999987655
No 47
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.36 E-value=2.1e-11 Score=123.74 Aligned_cols=68 Identities=19% Similarity=0.224 Sum_probs=53.0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC-chhhhhhcCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF-SNLRRSLCKP 208 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~-S~vR~~l~~~ 208 (502)
.++...+.+.|.+.+++. |+++++++ |+++..+++. +.+.+.+| +++||.||.|+|.+ +.+++.++..
T Consensus 149 ~~~~~~~~~~l~~~a~~~-Gv~i~~~~~V~~i~~~~~~---v~v~t~~g---~i~a~~VV~A~G~~s~~l~~~~g~~ 218 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAA-GATLRAGETVTELVPDADG---VSVTTDRG---TYRAGKVVLACGPYTNDLLEPLGAR 218 (397)
T ss_dssp EEEHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEETTE---EEEEESSC---EEEEEEEEECCGGGHHHHHGGGTCC
T ss_pred EEcHHHHHHHHHHHHHHc-CCEEECCCEEEEEEEcCCe---EEEEECCC---EEEcCEEEEcCCcChHHHhhhcCCC
Confidence 456678889999998887 89999987 9999988775 34555555 36699999999999 4577777653
No 48
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.34 E-value=1.1e-11 Score=131.99 Aligned_cols=153 Identities=20% Similarity=0.229 Sum_probs=96.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----------chhhhcccc---------ccceEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----------DCVEEIDAQ---------QVLGYALF 111 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----------~~l~~l~~~---------~~~g~~~~ 111 (502)
..++||||||||++||++|+.|+++|.+|+|+||.+.....+. ...+.+... ...+-...
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~ 203 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQNI 203 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcCCC
Confidence 4468999999999999999999999999999999876543211 000000000 00000000
Q ss_pred ECCce-----------------eeeeccC-cCCCCCCcce-------eecchHHHHHHHHHHHcCCCeEEEece-EEEEE
Q 010765 112 KDGKS-----------------TRLSYPL-EKFHADVSGR-------SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLL 165 (502)
Q Consensus 112 ~~g~~-----------------~~~~~~~-~~~~~~~~g~-------~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~ 165 (502)
.+... ..+.+.. .......... ......+...|.+.+++. |+++++++ |+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~~~~r~~~~~~g~~~g~~l~~~L~~~~~~~-gv~i~~~~~v~~l~ 282 (571)
T 1y0p_A 204 NDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGASVNRAHRPTGGAGVGAHVVQVLYDNAVKR-NIDLRMNTRGIEVL 282 (571)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEEEEEE
T ss_pred CCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCcCCCeeEecCCCCCCHHHHHHHHHHHHHhc-CCEEEeCCEeeEeE
Confidence 00000 0000000 0000000000 023457889999999887 89999998 99998
Q ss_pred eeC-CeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhh
Q 010765 166 EEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 205 (502)
Q Consensus 166 ~~~-~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l 205 (502)
.++ +++.+|.+.+.+|+..+++||.||.|+|.+|..++.+
T Consensus 283 ~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~n~~~~ 323 (571)
T 1y0p_A 283 KDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAKNNERV 323 (571)
T ss_dssp ECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred EcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCcccCHHHH
Confidence 876 7888898877678777788999999999999865543
No 49
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.31 E-value=1.4e-11 Score=127.25 Aligned_cols=151 Identities=19% Similarity=0.325 Sum_probs=93.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc----------------chhhhccccccc---eEEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV----------------DCVEEIDAQQVL---GYALFK 112 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~----------------~~l~~l~~~~~~---g~~~~~ 112 (502)
..++||+|||||++|+++|+.|+++|.+|+|+||.+.....+. +.++.+...... .+..+.
T Consensus 24 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (447)
T 2i0z_A 24 AMHYDVIVIGGGPSGLMAAIGAAEEGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSIFN 103 (447)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHHSC
T ss_pred cCCCCEEEECCcHHHHHHHHHHHHCCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHhcC
Confidence 4568999999999999999999999999999999865432110 000111000000 000000
Q ss_pred CCceee-e-eccCcCCCCCCcceeec----chHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEE
Q 010765 113 DGKSTR-L-SYPLEKFHADVSGRSFH----NGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELR 185 (502)
Q Consensus 113 ~g~~~~-~-~~~~~~~~~~~~g~~i~----r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~ 185 (502)
...... + .... .......+..+. ...+.+.|.+.+++. |+++++++ |+++..+++++.+|+ ..+|+ +
T Consensus 104 ~~~~~~~~~~~G~-~~~~~~~g~~~p~~~~~~~l~~~L~~~~~~~-GV~i~~~~~V~~i~~~~~~v~~V~--~~~G~--~ 177 (447)
T 2i0z_A 104 NEDIITFFENLGV-KLKEEDHGRMFPVSNKAQSVVDALLTRLKDL-GVKIRTNTPVETIEYENGQTKAVI--LQTGE--V 177 (447)
T ss_dssp HHHHHHHHHHTTC-CEEECGGGEEEETTCCHHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTCC--E
T ss_pred HHHHHHHHHhcCC-ceEEeeCCEEECCCCCHHHHHHHHHHHHHHC-CCEEEeCcEEEEEEecCCcEEEEE--ECCCC--E
Confidence 000000 0 0000 000011122232 467888999999886 89999988 999988877755554 45675 3
Q ss_pred EecCEEEEecCCCc-----------hhhhhhcCC
Q 010765 186 AYAPLTIVCDGCFS-----------NLRRSLCKP 208 (502)
Q Consensus 186 v~ad~vI~ADG~~S-----------~vR~~l~~~ 208 (502)
++||.||.|+|.+| .+++.+|..
T Consensus 178 i~Ad~VVlAtGg~s~~~~g~tG~g~~la~~~G~~ 211 (447)
T 2i0z_A 178 LETNHVVIAVGGKSVPQTGSTGDGYAWAEKAGHT 211 (447)
T ss_dssp EECSCEEECCCCSSSGGGSCSSHHHHHHHHTTCC
T ss_pred EECCEEEECCCCCcCCCCCCCcHHHHHHHHCCCC
Confidence 66999999999999 788888764
No 50
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=99.31 E-value=8.3e-12 Score=133.38 Aligned_cols=69 Identities=13% Similarity=0.257 Sum_probs=58.3
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchhhhhhc
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~vR~~l~ 206 (502)
..+...|.+.+.+.+++++++++ ++++..+++++.+|.+.+ .+|+..+++|+.||.|+|.+|.++....
T Consensus 134 ~~l~~~L~~~~~~~gnv~i~~~~~v~~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~~~~ 204 (602)
T 1kf6_A 134 FHMLHTLFQTSLQFPQIQRFDEHFVLDILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYRYNT 204 (602)
T ss_dssp HHHHHHHHHHHTTCTTEEEEETEEEEEEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSSSBS
T ss_pred HHHHHHHHHHHHhCCCcEEEeCCEEEEEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCcccccCcC
Confidence 47888999999888559999998 999998888888887765 6787667889999999999999876553
No 51
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.30 E-value=1.5e-11 Score=120.10 Aligned_cols=144 Identities=24% Similarity=0.250 Sum_probs=91.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCccc---chhhhccccccceEEEEECCceee---eeccC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIV---DCVEEIDAQQVLGYALFKDGKSTR---LSYPL 123 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~---~~l~~l~~~~~~g~~~~~~g~~~~---~~~~~ 123 (502)
..++||+|||||++|+++|+.|+++ |.+|+|+|+++......+ ..+. .. ......... ...+.
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~~~~g~~V~v~e~~~~~ggg~~~~g~~~~--------~~-~~~~~~~~~L~~~Gv~~ 133 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWLGGQLFS--------AM-VMRKPAHLFLQELEIPY 133 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTCCGGGCC--------CE-EEETTTHHHHHHTTCCC
T ss_pred cCcCCEEEECccHHHHHHHHHHHhcCCCCeEEEEecCccccccccccCcccc--------hh-hhhhHHHHHHHhhCccc
Confidence 3457999999999999999999998 999999999876543221 0000 00 000000000 00000
Q ss_pred cCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC----C--eEEEEEEEe----CCC------cEEEE
Q 010765 124 EKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN----G--TIKGVQYKT----KDG------QELRA 186 (502)
Q Consensus 124 ~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~----~--~v~~v~~~~----~~G------~~~~v 186 (502)
... .......+...+...|++.+.+.+|++++.++ ++++..++ + ++.||.+.. .+| +..++
T Consensus 134 ~~~--g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~~I 211 (326)
T 2gjc_A 134 EDE--GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPNVI 211 (326)
T ss_dssp EEC--SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCEEE
T ss_pred ccC--CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCceEE
Confidence 000 01111224567899999999988899999998 99998763 4 788887752 233 33457
Q ss_pred ec---------------CEEEEecCCCchhhhhhc
Q 010765 187 YA---------------PLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 187 ~a---------------d~vI~ADG~~S~vR~~l~ 206 (502)
.| ++||+|+|..|++.+.+.
T Consensus 212 ~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~~~~ 246 (326)
T 2gjc_A 212 ELAGYKNDGTRDLSQKHGVILSTTGHDGPFGAFCA 246 (326)
T ss_dssp EESCCCSSSCCCSSTTCCEEEECCCCC--CCSHHH
T ss_pred EEeeccccccccccccCCEEEECcCCCchHHHHHH
Confidence 78 999999999998877664
No 52
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.29 E-value=8.7e-11 Score=123.01 Aligned_cols=64 Identities=17% Similarity=0.239 Sum_probs=45.2
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhc
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~ 206 (502)
..+.+.|.+.++++ |++|+.++ |++++.+++++++|+ .++|+++ .||.||.+-+.....++.+.
T Consensus 221 ~~l~~aL~~~~~~~-Gg~I~~~~~V~~I~~~~~~~~gV~--~~~g~~~--~ad~VV~~a~~~~~~~~Ll~ 285 (501)
T 4dgk_A 221 GALVQGMIKLFQDL-GGEVVLNARVSHMETTGNKIEAVH--LEDGRRF--LTQAVASNADVVHTYRDLLS 285 (501)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCEE--ECSCEEECCC----------
T ss_pred cchHHHHHHHHHHh-CCceeeecceeEEEeeCCeEEEEE--ecCCcEE--EcCEEEECCCHHHHHHHhcc
Confidence 35778888889888 89999998 999999999887765 5778865 49999988877777666654
No 53
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.26 E-value=3e-11 Score=108.52 Aligned_cols=117 Identities=21% Similarity=0.363 Sum_probs=85.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
+||+|||||++|+.+|..|++.|.+|+|+|+.+....+.. .+ ..++ .. + ..
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~~v~lie~~~~~~~~~~----~~------------------~~~~--~~---~--~~ 52 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGLKVLVLDGGRSKVKGVS----RV------------------PNYP--GL---L--DE 52 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCCTTTTCS----CC------------------CCST--TC---T--TC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCcEEEEeCCCCcccCch----hh------------------hccC--CC---c--CC
Confidence 6899999999999999999999999999999863211110 00 0000 00 0 01
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhcC
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLCK 207 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~~ 207 (502)
+....+.+.+.+.+++. +++++.++++++..+++. +.+..++| ++.+|+||.|+|.+|.+++.+++
T Consensus 53 ~~~~~~~~~l~~~~~~~-gv~v~~~~v~~i~~~~~~---~~v~~~~g---~i~ad~vI~A~G~~~~~~~~~g~ 118 (180)
T 2ywl_A 53 PSGEELLRRLEAHARRY-GAEVRPGVVKGVRDMGGV---FEVETEEG---VEKAERLLLCTHKDPTLPSLLGL 118 (180)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSS---EEEECSSC---EEEEEEEEECCTTCCHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHHc-CCEEEeCEEEEEEEcCCE---EEEEECCC---EEEECEEEECCCCCCCccccCCC
Confidence 34567888888888887 799998888888876654 34556666 36699999999999988887765
No 54
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=99.25 E-value=1.9e-11 Score=129.04 Aligned_cols=65 Identities=17% Similarity=0.172 Sum_probs=50.4
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEe-eCC------eEEEEEEEe-CCCcEEEEecCEEEEecCCCchhh
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLE-ENG------TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNLR 202 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~-~~~------~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~vR 202 (502)
..+...|.+.+++.+|+++++++ ++++.. +++ ++.||.+.+ .+|+..+++|+.||.|+|..|.+-
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~~ 211 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKVY 211 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGGS
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCccccc
Confidence 35677788888875689999998 999987 445 788888876 467766788999999999999763
No 55
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.25 E-value=3.4e-11 Score=127.57 Aligned_cols=143 Identities=22% Similarity=0.289 Sum_probs=93.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC-CCCccc----------chhhhccccc--------cceEEEEEC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIV----------DCVEEIDAQQ--------VLGYALFKD 113 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~-~~~r~~----------~~l~~l~~~~--------~~g~~~~~~ 113 (502)
.++||+|||||++|+++|+.|++.|.+|+|+|+... .....+ .++++++... ..+..+..
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~Cnps~ggia~~~lv~ei~algg~~~~~~d~~gi~f~~- 105 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNIDTLGQMSCNPAIGGIGKGHLVKEVDALGGLMAKAIDQAGIQFRI- 105 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSSSEEESTTHHHHHHHHHHTTCSHHHHHHHHEEEEEE-
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCCCEEEEeecccccccccccccccchhhHHHHHHHHHhccHHHHHhhhcccchhh-
Confidence 468999999999999999999999999999999742 111101 1222222110 01111110
Q ss_pred CceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 114 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 114 g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
+...... ........+++..+...|.+.+++.+|+++..+.|+++..+++.+.+|. ..+|. +++||.||.
T Consensus 106 -----l~~~kgp-av~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~--t~dG~--~I~Ad~VVL 175 (651)
T 3ces_A 106 -----LNASKGP-AVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAV--TQMGL--KFRAKAVVL 175 (651)
T ss_dssp -----ESTTSCG-GGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEE--ETTSE--EEEEEEEEE
T ss_pred -----hhcccCc-ccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEE--ECCCC--EEECCEEEE
Confidence 0000000 0001123577888999999999886699997777999988778776665 45674 466999999
Q ss_pred ecCCCchhhhhhc
Q 010765 194 CDGCFSNLRRSLC 206 (502)
Q Consensus 194 ADG~~S~vR~~l~ 206 (502)
|+|.+|..+...|
T Consensus 176 ATGt~s~~~~i~G 188 (651)
T 3ces_A 176 TVGTFLDGKIHIG 188 (651)
T ss_dssp CCSTTTCCEEECC
T ss_pred cCCCCccCccccC
Confidence 9999998766543
No 56
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.25 E-value=4.3e-11 Score=125.75 Aligned_cols=63 Identities=25% Similarity=0.412 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEeCCCcEEEEecC-EEEEecCCCchhhh
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKTKDGQELRAYAP-LTIVCDGCFSNLRR 203 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~-~~~v~~v~~~~~~G~~~~v~ad-~vI~ADG~~S~vR~ 203 (502)
.+...|.+.+++. |+++++++ |++++.+ ++++++|.+.. +|+..+++|| .||.|+|.+|.-++
T Consensus 203 ~l~~~L~~~~~~~-Gv~i~~~t~v~~L~~~~~g~v~GV~~~~-~g~~~~i~A~k~VVlAtGG~~~n~~ 268 (510)
T 4at0_A 203 MLMKPLVETAEKL-GVRAEYDMRVQTLVTDDTGRVVGIVAKQ-YGKEVAVRARRGVVLATGSFAYNDK 268 (510)
T ss_dssp HHHHHHHHHHHHT-TCEEECSEEEEEEEECTTCCEEEEEEEE-TTEEEEEEEEEEEEECCCCCTTCHH
T ss_pred HHHHHHHHHHHHc-CCEEEecCEeEEEEECCCCcEEEEEEEE-CCcEEEEEeCCeEEEeCCChhhCHH
Confidence 7899999999988 89999998 9999987 68888998866 5556678995 99999999995433
No 57
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.24 E-value=2.2e-11 Score=129.02 Aligned_cols=140 Identities=25% Similarity=0.303 Sum_probs=93.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC-CCCccc----------chhhhccccc--------cceEEEEE
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIV----------DCVEEIDAQQ--------VLGYALFK 112 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~-~~~r~~----------~~l~~l~~~~--------~~g~~~~~ 112 (502)
+.++||+|||||++|+++|+.|++.|.+|+|+|+... .....+ .++++++... ..+..+..
T Consensus 19 ~~~yDVIVIGgG~AGl~AAlaLAr~G~kVlLIEk~~~~iG~~~c~ps~gGia~~~lv~el~al~g~~~~~~d~~gi~f~~ 98 (641)
T 3cp8_A 19 SHMYDVIVVGAGHAGCEAALAVARGGLHCLLITSDLSAVARMSCNPAIGGVAKGQITREIDALGGEMGKAIDATGIQFRM 98 (641)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCSSCSEEECHHHHHHHHHHHHHTCSHHHHHHHHEEEEEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHHCCCcEEEEEecccccCCCccccchhhhhHHHHHHHHHhcccHHHHHHHhcCCchhh
Confidence 4569999999999999999999999999999999842 111101 2233322110 01121110
Q ss_pred CCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEE
Q 010765 113 DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 192 (502)
Q Consensus 113 ~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI 192 (502)
+... ...........+++..+...|.+.+++.+|++++.+.|+++..+++.+.+|. ..+|.. ++||.||
T Consensus 99 ------l~~~-kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~--t~~G~~--i~Ad~VV 167 (641)
T 3cp8_A 99 ------LNRS-KGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVT--VRSGRA--IQAKAAI 167 (641)
T ss_dssp ------ECSS-SCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEE--ETTSCE--EEEEEEE
T ss_pred ------cccc-cCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEE--ECCCcE--EEeCEEE
Confidence 0000 0000001123678889999999999987799998878999988888776665 456764 5699999
Q ss_pred EecCCCchhh
Q 010765 193 VCDGCFSNLR 202 (502)
Q Consensus 193 ~ADG~~S~vR 202 (502)
.|+|.+|..+
T Consensus 168 LATG~~s~~~ 177 (641)
T 3cp8_A 168 LACGTFLNGL 177 (641)
T ss_dssp ECCTTCBTCE
T ss_pred ECcCCCCCcc
Confidence 9999997654
No 58
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.24 E-value=1.5e-11 Score=129.23 Aligned_cols=152 Identities=20% Similarity=0.236 Sum_probs=92.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccc---hhhhccccc-------cceEEEEECCceee-e-
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVD---CVEEIDAQQ-------VLGYALFKDGKSTR-L- 119 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~---~l~~l~~~~-------~~g~~~~~~g~~~~-~- 119 (502)
..++||+||||||+|+++|+.|++.|++|+|+||.+....|... .+....... ..+...+.+++... +
T Consensus 105 ~~~~DVVIVGgGpaGL~aA~~La~~G~kV~VlEr~~~~~~R~~~~~g~w~~~~~~~~~~i~~g~gGag~~sdgkl~~~i~ 184 (549)
T 3nlc_A 105 NLTERPIVIGFGPCGLFAGLVLAQMGFNPIIVERGKEVRERTKDTFGFWRKRTLNPESNVQFGEGGAGTFSDGKLYSQVK 184 (549)
T ss_dssp TCCCCCEEECCSHHHHHHHHHHHHTTCCCEEECSSCCHHHHHHHHHHHHHHCCCCTTSSSSSSTTGGGTTSCCCCCCCSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCeEEEEEccCcccccccchhcccccccccccccceeccCCcccccCCceEEEec
Confidence 44589999999999999999999999999999998654333321 111100000 00000000010000 0
Q ss_pred --------------eccCc-C--CCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCC
Q 010765 120 --------------SYPLE-K--FHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDG 181 (502)
Q Consensus 120 --------------~~~~~-~--~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G 181 (502)
.+... . ....+.........+.+.|++.+++. |+++++++ |+++..+++++.+|+ ..+|
T Consensus 185 ~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~-Gv~I~~~t~V~~I~~~~~~v~gV~--l~~G 261 (549)
T 3nlc_A 185 DPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIEL-GGEIRFSTRVDDLHMEDGQITGVT--LSNG 261 (549)
T ss_dssp CTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHT-TCEEESSCCEEEEEESSSBEEEEE--ETTS
T ss_pred cccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhc-CCEEEeCCEEEEEEEeCCEEEEEE--ECCC
Confidence 00000 0 00011111234567888899999887 89999998 999988877765554 4677
Q ss_pred cEEEEecCEEEEecCCCch----hhhhhcCC
Q 010765 182 QELRAYAPLTIVCDGCFSN----LRRSLCKP 208 (502)
Q Consensus 182 ~~~~v~ad~vI~ADG~~S~----vR~~l~~~ 208 (502)
++ ++||+||.|||.+|. ..+..++.
T Consensus 262 ~~--i~Ad~VVlA~G~~s~~~~~~l~~~Gi~ 290 (549)
T 3nlc_A 262 EE--IKSRHVVLAVGHSARDTFEMLHERGVY 290 (549)
T ss_dssp CE--EECSCEEECCCTTCHHHHHHHHHTTCC
T ss_pred CE--EECCEEEECCCCChhhHHHHHHHcCCC
Confidence 65 569999999999995 34444544
No 59
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.23 E-value=7.5e-11 Score=125.51 Aligned_cols=152 Identities=18% Similarity=0.257 Sum_probs=95.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----------chhhhcccc--------cc--ceE---
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----------DCVEEIDAQ--------QV--LGY--- 108 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----------~~l~~l~~~--------~~--~g~--- 108 (502)
.++||+|||||++|+++|+.|++.|.+|+|+|+.+.....+. ...+..... .. .+.
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~~~ 204 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRNIN 204 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTTCS
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCCCC
Confidence 467999999999999999999999999999999865532211 000000000 00 000
Q ss_pred -----EEE-ECCc-------eeeeeccC-cCCCCCCcce-------eecchHHHHHHHHHHHcCCCeEEEece-EEEEEe
Q 010765 109 -----ALF-KDGK-------STRLSYPL-EKFHADVSGR-------SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLE 166 (502)
Q Consensus 109 -----~~~-~~g~-------~~~~~~~~-~~~~~~~~g~-------~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~ 166 (502)
..+ .... ...+.+.. .........+ ......+...|.+.+++. |+++++++ |++++.
T Consensus 205 ~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~~~~r~~~~~~~~~~g~~l~~~L~~~~~~~-gv~i~~~t~v~~l~~ 283 (572)
T 1d4d_A 205 DPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGASVNRSHRPTGGAGVGAHVAQVLWDNAVKR-GTDIRLNSRVVRILE 283 (572)
T ss_dssp CHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTCSSCCEEESTTTCCHHHHHHHHHHHHHHHT-TCEEESSEEEEEEEE
T ss_pred CHHHHHHHHHccHHHHHHHHhcCCccccccccCCCcCCeeEecCCCCCCHHHHHHHHHHHHHHc-CCeEEecCEEEEEEE
Confidence 000 0000 00000000 0000000001 123457889999999887 89999998 999987
Q ss_pred eC-CeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhh
Q 010765 167 EN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSL 205 (502)
Q Consensus 167 ~~-~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l 205 (502)
++ +++.+|.+.+.+|+..+++||.||.|+|.+|..++.+
T Consensus 284 ~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~~~~~ 323 (572)
T 1d4d_A 284 DASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKNNERV 323 (572)
T ss_dssp C--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTCHHHH
T ss_pred CCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccCHHHH
Confidence 76 8888898877778777788999999999999875544
No 60
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.23 E-value=8.8e-11 Score=124.00 Aligned_cols=141 Identities=21% Similarity=0.248 Sum_probs=92.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC-CCCccc----------chhhhccccc--------cceEEEEEC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT-EPDRIV----------DCVEEIDAQQ--------VLGYALFKD 113 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~-~~~r~~----------~~l~~l~~~~--------~~g~~~~~~ 113 (502)
.++||+|||||++|+++|+.|++.|.+|+|+|+... .....+ .+.++++... ..++.+..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~kVlLIEk~~~~iG~~~Cnps~GGia~g~lv~eldalgg~~~~~~d~~gi~f~~- 104 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGAKTAMFVLNADTIGQMSCNPAIGGIAKGIVVREIDALGGEMGKAIDQTGIQFKM- 104 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCGGGTTCCCSCSEEECTTHHHHHHHHHHHTCSHHHHHHHHEEEEEE-
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCCEEEEEecccccCCcCccccccccchHHHHHHHHHhhhHHHHHhhhcccceee-
Confidence 469999999999999999999999999999999742 111111 1222221110 01111110
Q ss_pred CceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 114 GKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 114 g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
+... ...........+++..+...|.+.+++.+|+++..+.|+++..+++++.+|. ..+|.. ++||.||.
T Consensus 105 -----l~~~-kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~--t~dG~~--i~AdaVVL 174 (637)
T 2zxi_A 105 -----LNTR-KGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVR--TNLGVE--YKTKAVVV 174 (637)
T ss_dssp -----ESTT-SCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEE--ETTSCE--EECSEEEE
T ss_pred -----cccc-cCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEE--ECCCcE--EEeCEEEE
Confidence 0000 0000001123567888999999999887799997777999988888776665 456764 56999999
Q ss_pred ecCCCchhhhh
Q 010765 194 CDGCFSNLRRS 204 (502)
Q Consensus 194 ADG~~S~vR~~ 204 (502)
|+|.+|..+..
T Consensus 175 ATG~~s~~~~~ 185 (637)
T 2zxi_A 175 TTGTFLNGVIY 185 (637)
T ss_dssp CCTTCBTCEEE
T ss_pred ccCCCccCcee
Confidence 99999876654
No 61
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.22 E-value=8.2e-10 Score=117.36 Aligned_cols=72 Identities=21% Similarity=0.207 Sum_probs=57.3
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCc-hhhhhhcC
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFS-NLRRSLCK 207 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S-~vR~~l~~ 207 (502)
++..++...|.+.+.+. |+++++++ |+++..+++++.+|++.+. +|+..+++||.||.|+|.+| .+++..+.
T Consensus 185 v~~~~l~~~l~~~a~~~-Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~ 259 (571)
T 2rgh_A 185 NNDARLVIDNIKKAAED-GAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFT 259 (571)
T ss_dssp CCHHHHHHHHHHHHHHT-TCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCS
T ss_pred EchHHHHHHHHHHHHHc-CCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhcc
Confidence 45667888888888887 89999987 9999988888888887763 56655688999999999998 45555543
No 62
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.22 E-value=4.2e-11 Score=122.07 Aligned_cols=151 Identities=18% Similarity=0.167 Sum_probs=88.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCccc---c-hh--hh----------------cccc-ccc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIV---D-CV--EE----------------IDAQ-QVL 106 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~---~-~l--~~----------------l~~~-~~~ 106 (502)
..++||+|||||++|+++|+.|+++ |++|+|+|+.......+. + .+ .. +... ...
T Consensus 34 ~~~~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 113 (405)
T 3c4n_A 34 EEAFDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSG 113 (405)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSS
T ss_pred cCcCCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCC
Confidence 3458999999999999999999999 999999999854322111 1 11 00 0000 000
Q ss_pred -eEEEEECCcee---------eee-------ccC-------cCCC---CCCcceeecchHHHHHHHHHHHcCCCeEEEec
Q 010765 107 -GYALFKDGKST---------RLS-------YPL-------EKFH---ADVSGRSFHNGRFIQRMREKAASLPNVRLEQG 159 (502)
Q Consensus 107 -g~~~~~~g~~~---------~~~-------~~~-------~~~~---~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~ 159 (502)
...+...+... .+. ++. .... ..+....++...+...|.+.+++. |++++++
T Consensus 114 ~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~-Gv~i~~~ 192 (405)
T 3c4n_A 114 KTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQ-GAGLLLN 192 (405)
T ss_dssp CCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTT-TCEEECS
T ss_pred CCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHC-CCEEEcC
Confidence 00111111100 000 000 0000 011223567788999999999987 8999988
Q ss_pred e-EE---------EEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc-hhhh-hhcCCC
Q 010765 160 T-VT---------SLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS-NLRR-SLCKPK 209 (502)
Q Consensus 160 ~-v~---------~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S-~vR~-~l~~~~ 209 (502)
+ |+ ++..+++++ .+.+.+| +++||.||.|+|.+| .+++ .+++..
T Consensus 193 ~~v~~~~g~~~~~~i~~~~~~v---~v~~~~g---~i~a~~VV~A~G~~s~~l~~~~~g~~~ 248 (405)
T 3c4n_A 193 TRAELVPGGVRLHRLTVTNTHQ---IVVHETR---QIRAGVIIVAAGAAGPALVEQGLGLHT 248 (405)
T ss_dssp CEEEEETTEEEEECBCC----------CBCCE---EEEEEEEEECCGGGHHHHHHHHHCCCC
T ss_pred CEEEeccccccccceEeeCCeE---EEEECCc---EEECCEEEECCCccHHHHHHHhcCCCC
Confidence 7 88 777666544 3334444 467999999999999 6887 777643
No 63
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.21 E-value=1e-10 Score=120.66 Aligned_cols=69 Identities=17% Similarity=0.221 Sum_probs=52.4
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEe---------------eCCeEEEEEEEeCCCcEEEE--ecCEEEEec
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLE---------------ENGTIKGVQYKTKDGQELRA--YAPLTIVCD 195 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~---------------~~~~v~~v~~~~~~G~~~~v--~ad~vI~AD 195 (502)
.++...+.+.|.+.+++. |+++++++ |+++.. +++++.+| .+.+|+ + +||.||.|+
T Consensus 177 ~~~~~~l~~~L~~~~~~~-Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V--~t~~g~---i~~~Ad~VV~At 250 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGA-GVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAA--VLSDGT---RVEVGEKLVVAA 250 (448)
T ss_dssp ECCHHHHHHHHHHHHHHT-TCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEE--EETTSC---EEEEEEEEEECC
T ss_pred EEcHHHHHHHHHHHHHhC-CCEEEcCCeEEEEEecccccccccccccccCCCceEEE--EeCCCE---EeecCCEEEECC
Confidence 456668999999999887 89999987 999987 44544444 356662 5 699999999
Q ss_pred CCCch-hhhhhcCC
Q 010765 196 GCFSN-LRRSLCKP 208 (502)
Q Consensus 196 G~~S~-vR~~l~~~ 208 (502)
|.+|. +.+.++..
T Consensus 251 G~~s~~l~~~~g~~ 264 (448)
T 3axb_A 251 GVWSNRLLNPLGID 264 (448)
T ss_dssp GGGHHHHHGGGTCC
T ss_pred CcCHHHHHHHcCCC
Confidence 99987 66666653
No 64
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=99.20 E-value=7.8e-11 Score=125.89 Aligned_cols=63 Identities=21% Similarity=0.268 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+...|.+.+.+. |++++.++ ++++..+++++.||.+.+ .+|+...++|+.||.|+|..|.+
T Consensus 155 ~~l~~~L~~~~~~~-gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 155 HSLLHTLYGRSLRY-DTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHTTS-CCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 36888999998876 89999998 999998888888998876 67887778899999999999975
No 65
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=99.19 E-value=6.1e-11 Score=126.37 Aligned_cols=63 Identities=11% Similarity=0.194 Sum_probs=53.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~-~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+...|.+.+++. |+++++++ |+++..+ ++++.+|.+.+ .+|+..+++|+.||.|+|..|..
T Consensus 143 ~~l~~~L~~~~~~~-gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKN-HTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhC-CCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 46788899998887 89999998 9999886 67788888876 67877778899999999999864
No 66
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.19 E-value=4.5e-11 Score=118.97 Aligned_cols=129 Identities=11% Similarity=0.140 Sum_probs=84.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
++||+|||||++|+++|..|+++|++|+|+|+.+.........++.+... .... ...++..... .....
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~~v~vie~~~~~gg~~~~~~~~~~~~--------~~~~--~~~~~~~~~~-~~~~~ 71 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGLSYVILDAEASPGGAWQHAWHSLHLF--------SPAG--WSSIPGWPMP-ASQGP 71 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSCCEEEECCSSSSSGGGGGSCTTCBCS--------SCGG--GSCCSSSCCC-CCSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCCCCCCcccCCCCCcEec--------Cchh--hhhCCCCCCC-CCccC
Confidence 47999999999999999999999999999999865432211111111000 0000 0000000000 11112
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEE-EEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQ-YKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~-~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..++..+.+.|.+.+++. ++++++++ |+++..+++. +. +.+++| ++++|+||.|+|.+|.
T Consensus 72 ~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~~v~~~~g---~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 72 YPARAEVLAYLAQYEQKY-ALPVLRPIRVQRVSHFGER---LRVVARDGR---QWLARAVISATGTWGE 133 (357)
T ss_dssp SCBHHHHHHHHHHHHHHT-TCCEECSCCEEEEEEETTE---EEEEETTSC---EEEEEEEEECCCSGGG
T ss_pred CCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEECCCc---EEEEEeCCC---EEEeCEEEECCCCCCC
Confidence 345678888999888887 78999986 9999888774 34 555666 3569999999998774
No 67
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.16 E-value=3.5e-10 Score=116.30 Aligned_cols=63 Identities=27% Similarity=0.376 Sum_probs=50.6
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEec----eEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQG----TVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~----~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..++...+...|.+.+++. |++++++ .|+++..+++++.+|+ +.+|++ ++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~-Gv~i~~~t~~~~V~~i~~~~~~v~gV~--t~~G~~--i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRM-GVKFVTGTPQGRVVTLIFENNDVKGAV--TADGKI--WRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHT-TCEEEESTTTTCEEEEEEETTEEEEEE--ETTTEE--EECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhc-CCEEEeCCcCceEEEEEecCCeEEEEE--ECCCCE--EECCEEEECCCCChh
Confidence 3455668999999999988 8999987 5999998888766554 567754 569999999999985
No 68
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.14 E-value=1.3e-10 Score=118.04 Aligned_cols=135 Identities=18% Similarity=0.286 Sum_probs=82.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc-----ch-hhhccccccceEEEEEC-Cceee--------
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV-----DC-VEEIDAQQVLGYALFKD-GKSTR-------- 118 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~-----~~-l~~l~~~~~~g~~~~~~-g~~~~-------- 118 (502)
++||+|||||++|+++|+.|+++|.+|+|+||.+....... .+ +....... .. ++.. .....
T Consensus 4 ~~dViIIGgG~aGl~aA~~la~~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~-~~--~~~~~~~~~~~~l~~~~~ 80 (401)
T 2gqf_A 4 YSENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTP-AH--YLSQNPHFVKSALARYTN 80 (401)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCG-GG--EECSCTTSTHHHHHHSCH
T ss_pred CCCEEEECCcHHHHHHHHHHHhCCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCH-HH--hccCCHHHHHHHHHhCCH
Confidence 58999999999999999999999999999999865432110 00 00000000 00 0000 00000
Q ss_pred ---ee----ccCcCCCCCCcceee---cchHHHHHHHHHHHcCCCeEEEece-EEEEEee----CCeEEEEEEEeCCCcE
Q 010765 119 ---LS----YPLEKFHADVSGRSF---HNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE----NGTIKGVQYKTKDGQE 183 (502)
Q Consensus 119 ---~~----~~~~~~~~~~~g~~i---~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~----~~~v~~v~~~~~~G~~ 183 (502)
.. +.. .......+..+ +...+.+.|.+.+++. |++++.++ |+++..+ ++. +.+..++|
T Consensus 81 ~~~~~~~~~~Gi-~~~~~~~g~~~p~~~~~~l~~~L~~~~~~~-Gv~i~~~~~v~~i~~~~~g~~~~---~~v~~~~g-- 153 (401)
T 2gqf_A 81 WDFISLVAEQGI-TYHEKELGQLFCDEGAEQIVEMLKSECDKY-GAKILLRSEVSQVERIQNDEKVR---FVLQVNST-- 153 (401)
T ss_dssp HHHHHHHHHTTC-CEEECSTTEEEETTCTHHHHHHHHHHHHHH-TCEEECSCCEEEEEECCSCSSCC---EEEEETTE--
T ss_pred HHHHHHHHhCCC-ceEECcCCEEccCCCHHHHHHHHHHHHHHC-CCEEEeCCEEEEEEcccCcCCCe---EEEEECCC--
Confidence 00 000 00000112222 5677888898888887 89999998 9999865 443 34555555
Q ss_pred EEEecCEEEEecCCCc
Q 010765 184 LRAYAPLTIVCDGCFS 199 (502)
Q Consensus 184 ~~v~ad~vI~ADG~~S 199 (502)
+++||.||.|+|.+|
T Consensus 154 -~i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 154 -QWQCKNLIVATGGLS 168 (401)
T ss_dssp -EEEESEEEECCCCSS
T ss_pred -EEECCEEEECCCCcc
Confidence 367999999999999
No 69
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.13 E-value=2.3e-10 Score=113.10 Aligned_cols=124 Identities=19% Similarity=0.220 Sum_probs=84.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.++||+|||||++|+++|+.|++.|++|+|+|+++.... .+...... ..++ ..+ . .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg----~~~~~~~~----~~~~--------~~~--~------~ 59 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGLSFRFVDPLPEPGG----QLTALYPE----KYIY--------DVA--G------F 59 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSCH----HHHHTCTT----SEEC--------CST--T------C
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCCCCC----eeeccCCC----ceee--------ccC--C------C
Confidence 458999999999999999999999999999999854322 11110000 0000 000 0 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhc
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~ 206 (502)
..+.+..+...|.+.+.+. +++++.++ |+++..+++. +.+...+|++ +++|+||.|+|.+|...+...
T Consensus 60 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~~~lv~AtG~~~~~p~~~~ 128 (335)
T 2zbw_A 60 PKVYAKDLVKGLVEQVAPF-NPVYSLGERAETLEREGDL---FKVTTSQGNA--YTAKAVIIAAGVGAFEPRRIG 128 (335)
T ss_dssp SSEEHHHHHHHHHHHHGGG-CCEEEESCCEEEEEEETTE---EEEEETTSCE--EEEEEEEECCTTSEEEECCCC
T ss_pred CCCCHHHHHHHHHHHHHHc-CCEEEeCCEEEEEEECCCE---EEEEECCCCE--EEeCEEEECCCCCCCCCCCCC
Confidence 1245567888888888877 68888876 9998877663 4455667754 459999999999876555443
No 70
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.13 E-value=2.7e-09 Score=109.04 Aligned_cols=58 Identities=22% Similarity=0.269 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+.|.+.+++. |++++.++ |+++..+++++.+|+. +|++ ++||.||.|.|.+...
T Consensus 196 ~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~~~gv~~---~g~~--~~ad~VV~a~~~~~~~ 254 (425)
T 3ka7_A 196 KGIIDALETVISAN-GGKIHTGQEVSKILIENGKAAGIIA---DDRI--HDADLVISNLGHAATA 254 (425)
T ss_dssp HHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEEE---TTEE--EECSEEEECSCHHHHH
T ss_pred HHHHHHHHHHHHHc-CCEEEECCceeEEEEECCEEEEEEE---CCEE--EECCEEEECCCHHHHH
Confidence 34667778888887 89999998 9999998888766654 3554 5699999999987654
No 71
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.12 E-value=2.1e-10 Score=114.79 Aligned_cols=125 Identities=14% Similarity=0.150 Sum_probs=85.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
..+||+|||||++|+++|+.|++.|++|+|||+.+.... .+...... ...+ ..+ ..
T Consensus 13 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gg----~~~~~~~~----~~~~--------~~~--------~~ 68 (360)
T 3ab1_A 13 DMRDLTIIGGGPTGIFAAFQCGMNNISCRIIESMPQLGG----QLAALYPE----KHIY--------DVA--------GF 68 (360)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH----HHHHTCTT----SEEC--------CST--------TC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCCEEEEecCCCCCC----cccccCCC----cccc--------cCC--------CC
Confidence 468999999999999999999999999999999854321 11111000 0000 000 00
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhc
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~ 206 (502)
..+.+..+...|.+.+.+. +++++.++ |+++..+++. .+.+...+|++ +++|+||.|+|.+|..++.+.
T Consensus 69 ~~~~~~~~~~~l~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~~--~~~~~li~AtG~~~~~~~~~~ 138 (360)
T 3ab1_A 69 PEVPAIDLVESLWAQAERY-NPDVVLNETVTKYTKLDDG--TFETRTNTGNV--YRSRAVLIAAGLGAFEPRKLP 138 (360)
T ss_dssp SSEEHHHHHHHHHHHHHTT-CCEEECSCCEEEEEECTTS--CEEEEETTSCE--EEEEEEEECCTTCSCCBCCCG
T ss_pred CCCCHHHHHHHHHHHHHHh-CCEEEcCCEEEEEEECCCc--eEEEEECCCcE--EEeeEEEEccCCCcCCCCCCC
Confidence 1245677888888888877 78998886 9998876542 23455667764 559999999999886655543
No 72
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.12 E-value=4e-09 Score=107.81 Aligned_cols=59 Identities=15% Similarity=0.188 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhhhc
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRSLC 206 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~l~ 206 (502)
.+.+.|.+.+++. |++++.++ |+++..+++++ + ..+|++ ++||.||.|.|.+... +.++
T Consensus 190 ~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~v----V-~~~g~~--~~ad~Vv~a~~~~~~~-~ll~ 249 (421)
T 3nrn_A 190 AVIDELERIIMEN-KGKILTRKEVVEINIEEKKV----Y-TRDNEE--YSFDVAISNVGVRETV-KLIG 249 (421)
T ss_dssp HHHHHHHHHHHTT-TCEEESSCCEEEEETTTTEE----E-ETTCCE--EECSEEEECSCHHHHH-HHHC
T ss_pred HHHHHHHHHHHHC-CCEEEcCCeEEEEEEECCEE----E-EeCCcE--EEeCEEEECCCHHHHH-HhcC
Confidence 4566777778887 89999998 99998877754 3 346664 5699999999987654 3443
No 73
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.12 E-value=5.1e-10 Score=108.34 Aligned_cols=113 Identities=21% Similarity=0.317 Sum_probs=82.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
++||+|||||++|+++|..|++.|++|+|+|+..... +.. .. ...++ ...
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~~-~~~------------~~---------~~~~~--------~~~ 51 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARKNILLVDAGERRN-RFA------------SH---------SHGFL--------GQD 51 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCCGG-GGC------------SC---------CCSST--------TCT
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCEEEEeCCCccc-ccc------------hh---------hcCCc--------CCC
Confidence 4799999999999999999999999999999974210 000 00 00000 001
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
......+...+.+.+.+.+++++..++|+++..+++. ..+...+|++ +.+|.||.|+|..+..
T Consensus 52 ~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~d~vviAtG~~~~~ 114 (297)
T 3fbs_A 52 GKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGE---FIVEIDGGRR--ETAGRLILAMGVTDEL 114 (297)
T ss_dssp TCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTE---EEEEETTSCE--EEEEEEEECCCCEEEC
T ss_pred CCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCe---EEEEECCCCE--EEcCEEEECCCCCCCC
Confidence 2445678888889888887899988889999887764 4455677764 4599999999997654
No 74
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=99.11 E-value=3.4e-10 Score=121.79 Aligned_cols=62 Identities=15% Similarity=0.319 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
.+...|.+.+.+. |++++.++ |+++..+++++.||.+.+ .+|+...++|+.||.|+|..+.+
T Consensus 159 ~l~~~L~~~a~~~-gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 159 TMLFAVANECLKL-GVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHH-TCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHhC-CCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 6788888888877 89999998 999988888888888765 67887778899999999999865
No 75
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.11 E-value=1.8e-10 Score=115.63 Aligned_cols=61 Identities=21% Similarity=0.248 Sum_probs=48.2
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..++...+.+.|.+.+++. |+++++++ |+++..+++. +.+.+.+|+ ++||.||.|+|.+|.
T Consensus 144 g~~~~~~l~~~l~~~~~~~-G~~i~~~~~V~~i~~~~~~---~~v~~~~g~---~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 144 GFLRSELAIKTWIQLAKEA-GCAQLFNCPVTAIRHDDDG---VTIETADGE---YQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEEHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCE---EEEEEEEECCGGGGG
T ss_pred cEEcHHHHHHHHHHHHHHC-CCEEEcCCEEEEEEEcCCE---EEEEECCCe---EEcCEEEEcCCccHH
Confidence 3456678899999999887 89999987 9999887664 345566663 569999999999874
No 76
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.10 E-value=1.6e-09 Score=112.07 Aligned_cols=39 Identities=23% Similarity=0.381 Sum_probs=34.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC------CeEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG------RRVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G------~~v~lvEr~~~~~~ 91 (502)
+.+||+|||||++||++|+.|+++| ++|+|+|++....+
T Consensus 4 ~~~dVvIIGaGiaGLsaA~~L~~~G~~~~~~~~V~vlEa~~~~GG 48 (470)
T 3i6d_A 4 GKKHVVIIGGGITGLAAAFYMEKEIKEKNLPLELTLVEASPRVGG 48 (470)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHHHHTTTTCSEEEEEECSSSSSCT
T ss_pred CCCcEEEECCCHHHHHHHHHHHHhccccCCCCCEEEEECCCCCCc
Confidence 3579999999999999999999999 99999999865543
No 77
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.09 E-value=1.4e-09 Score=107.92 Aligned_cols=37 Identities=27% Similarity=0.379 Sum_probs=33.6
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEecCCCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPD 91 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~---~G~~v~lvEr~~~~~~ 91 (502)
.||+|||||++|+++|+.|++ .|++|+|+||......
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg 41 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGG 41 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCG
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCcc
Confidence 489999999999999999999 9999999999865544
No 78
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.07 E-value=8.2e-10 Score=107.82 Aligned_cols=114 Identities=18% Similarity=0.310 Sum_probs=76.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
+++|||+||||||+|+++|+.|+|.|++|+|+|++.. .... .+ ...+ +. . ..
T Consensus 4 M~~yDVvIIGaGpAGlsAA~~lar~g~~v~lie~~~~-gg~~---~~-----~~~~-------------~~-----~-~~ 55 (304)
T 4fk1_A 4 MKYIDCAVIGAGPAGLNASLVLGRARKQIALFDNNTN-RNRV---TQ-----NSHG-------------FI-----T-RD 55 (304)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSCC-GGGG---SS-----CBCC-------------ST-----T-CT
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC-CCee---ee-----ecCC-------------cc-----C-CC
Confidence 5679999999999999999999999999999998732 1110 00 0000 00 0 00
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+....+....++.+.+.+++.+..++++.+...+... .++...+|+++ .+|.||.|+|...
T Consensus 56 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~g~~~--~a~~liiATGs~p 117 (304)
T 4fk1_A 56 --GIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGL--FEIVTKDHTKY--LAERVLLATGMQE 117 (304)
T ss_dssp --TBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSC--EEEEETTCCEE--EEEEEEECCCCEE
T ss_pred --CCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCc--EEEEECCCCEE--EeCEEEEccCCcc
Confidence 12334566666777777778888888877776654432 33456778764 5999999999753
No 79
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.07 E-value=2.4e-10 Score=112.89 Aligned_cols=122 Identities=16% Similarity=0.189 Sum_probs=83.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
...+||+|||||++|+++|+.|+++|++|+|+|+.+....+..+.+.... . ...++ . .
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~vie~~~~~~~~~gg~~~~~~-------~--------~~~~~-----~--~ 77 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEIKPILYEGMMANGIAAGGQLTTTT-------E--------IENFP-----G--F 77 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGSS-------E--------ECCST-----T--C
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEecCCCCCCCcCcccccch-------h--------hcccC-----C--C
Confidence 45689999999999999999999999999999997522222222221110 0 00011 0 0
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEe---CCCcEEEEecCEEEEecCCCchh
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKT---KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~---~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+..+...|.+.+.+. +++++.++++++..+++.+ .+.. .++.. +.+|.||.|+|..+..
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~-gv~i~~~~v~~i~~~~~~~---~v~~~~~~~~~~--~~~d~vvlAtG~~~~~ 144 (338)
T 3itj_A 78 PDGLTGSELMDRMREQSTKF-GTEIITETVSKVDLSSKPF---KLWTEFNEDAEP--VTTDAIILATGASAKR 144 (338)
T ss_dssp TTCEEHHHHHHHHHHHHHHT-TCEEECSCEEEEECSSSSE---EEEETTCSSSCC--EEEEEEEECCCEEECC
T ss_pred cccCCHHHHHHHHHHHHHHc-CCEEEEeEEEEEEEcCCEE---EEEEEecCCCcE--EEeCEEEECcCCCcCC
Confidence 11255677888888888887 8999999988888776643 3434 24444 4599999999986543
No 80
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=99.04 E-value=6.5e-10 Score=119.56 Aligned_cols=67 Identities=16% Similarity=0.132 Sum_probs=54.2
Q ss_pred ecchHHHHHHHHHHHcC-CCeEEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 135 FHNGRFIQRMREKAASL-PNVRLEQGT-VTSLLEENG---TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~-~~v~i~~~~-v~~~~~~~~---~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
+....+...|.+.+++. ++++++.++ ++++..+++ ++.||.+.+ .+|+...++|+.||.|+|..+.+
T Consensus 163 ~~G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 163 INGESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp EEETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 34456788888888776 379999998 889888776 899998765 67877788999999999999864
No 81
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.04 E-value=9.8e-10 Score=113.37 Aligned_cols=146 Identities=19% Similarity=0.278 Sum_probs=86.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCCCCCccc--chhh---hccc-------cccce--------EEE
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEPDRIV--DCVE---EIDA-------QQVLG--------YAL 110 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~~~~r~~--~~l~---~l~~-------~~~~g--------~~~ 110 (502)
..+||+||||||+|+++|..|++.|. +|+||||......... .... .+.. ..+.. ..+
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~~~~~~~~~~~~ip~~~~~~~~~~~~~g~~~~~~~~~~ 84 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVWNYTSTLSNKLPVPSTNPILTTEPIVGPAALPVYPSPL 84 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTCSCCSCCCSCCCSSBCCTTCCCCCBCCSSSCCBCCCCC
T ss_pred CCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCeecCCCCCCcccccccccccccccccccccccCCccCch
Confidence 45799999999999999999999999 9999999854422110 0000 0000 00000 000
Q ss_pred EE----CCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCc-E
Q 010765 111 FK----DGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQ-E 183 (502)
Q Consensus 111 ~~----~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~-~ 183 (502)
+. +.......+....... ......++..+.+.|.+.++.. +..+++++ |+++..+++.+. |++.+ .+|+ .
T Consensus 85 ~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~~~~-~~~i~~~t~V~~v~~~~~~~~-V~~~~~~~G~~~ 161 (447)
T 2gv8_A 85 YRDLQTNTPIELMGYCDQSFKP-QTLQFPHRHTIQEYQRIYAQPL-LPFIKLATDVLDIEKKDGSWV-VTYKGTKAGSPI 161 (447)
T ss_dssp CTTCBCSSCHHHHSCTTCCCCT-TCCSSCBHHHHHHHHHHHHGGG-GGGEECSEEEEEEEEETTEEE-EEEEESSTTCCE
T ss_pred hhhhccCCCHHHhccCCCCCCC-CCCCCCCHHHHHHHHHHHHHHh-hCeEEeCCEEEEEEeCCCeEE-EEEeecCCCCee
Confidence 00 0000000010000000 0112356788999999988876 67788887 999988776543 55444 2365 4
Q ss_pred EEEecCEEEEecCCCchh
Q 010765 184 LRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 184 ~~v~ad~vI~ADG~~S~v 201 (502)
.++.+|.||.|+|.+|.-
T Consensus 162 ~~~~~d~VVvAtG~~s~p 179 (447)
T 2gv8_A 162 SKDIFDAVSICNGHYEVP 179 (447)
T ss_dssp EEEEESEEEECCCSSSSB
T ss_pred EEEEeCEEEECCCCCCCC
Confidence 456799999999998753
No 82
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.04 E-value=1.7e-09 Score=105.63 Aligned_cols=115 Identities=18% Similarity=0.262 Sum_probs=81.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
+||+|||||++|+++|+.|++.|+ +|+|+|++. ..... ... ... ..++ . ...
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~v~lie~~~-~gg~~----~~~-------------~~~--~~~~--~-----~~~ 54 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKNAVLFEKGM-PGGQI----TGS-------------SEI--ENYP--G-----VKE 54 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSSEEEECSSS-TTCGG----GGC-------------SCB--CCST--T-----CCS
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCcEEEEcCCC-CCccc----ccc-------------ccc--ccCC--C-----Ccc
Confidence 699999999999999999999999 999999962 21111 000 000 0011 0 012
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLR 202 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR 202 (502)
.+++..+.+.|.+.+.+. +++++.++++++..+++. +.+...+|++ +++|+||.|+|.++...
T Consensus 55 ~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~~~vv~AtG~~~~~~ 117 (311)
T 2q0l_A 55 VVSGLDFMQPWQEQCFRF-GLKHEMTAVQRVSKKDSH---FVILAEDGKT--FEAKSVIIATGGSPKRT 117 (311)
T ss_dssp CBCHHHHHHHHHHHHHTT-SCEEECSCEEEEEEETTE---EEEEETTSCE--EEEEEEEECCCEEECCC
T ss_pred cCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEEcCCE---EEEEEcCCCE--EECCEEEECCCCCCCCC
Confidence 356678888888888887 799988779999877763 3344567764 56999999999877543
No 83
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.00 E-value=3.8e-10 Score=111.47 Aligned_cols=120 Identities=15% Similarity=0.140 Sum_probs=79.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
..+||+||||||+|+++|+.|++.|++|+|+|+.........+.+.... .. ..++ . ..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~~v~lie~~~~~~~~~gg~~~~~~-------~~--------~~~~--~-----~~ 64 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAELKPLLFEGWMANDIAPGGQLTTTT-------DV--------ENFP--G-----FP 64 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSBTTBCTTCGGGGCS-------EE--------CCST--T-----CT
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCCeEEEEeccCccccCCCceeeecc-------cc--------ccCC--C-----Cc
Confidence 3579999999999999999999999999999983211111111111000 00 0000 0 01
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+..+...|.+.+.+. +++++.++++++..+++.+ .+.. +|.. +++|+||.|+|.++..
T Consensus 65 ~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~---~v~~-~~~~--~~~~~vv~A~G~~~~~ 126 (333)
T 1vdc_A 65 EGILGVELTDKFRKQSERF-GTTIFTETVTKVDFSSKPF---KLFT-DSKA--ILADAVILAIGAVAKR 126 (333)
T ss_dssp TCEEHHHHHHHHHHHHHHT-TCEEECCCCCEEECSSSSE---EEEC-SSEE--EEEEEEEECCCEEECC
T ss_pred cCCCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEEcCCEE---EEEE-CCcE--EEcCEEEECCCCCcCC
Confidence 1356677888888888877 7999998888887665543 2334 5543 5699999999998754
No 84
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.99 E-value=8.2e-10 Score=114.65 Aligned_cols=62 Identities=11% Similarity=0.155 Sum_probs=49.1
Q ss_pred hHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhhhh
Q 010765 138 GRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLRRS 204 (502)
Q Consensus 138 ~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR~~ 204 (502)
..+.+.|.+.+++. |+++++++ + ++..+++.+.+|.+.+.+| ++.||.||.|+|.+|.++..
T Consensus 119 ~~l~~~L~~~~~~~-gv~i~~~~~v-~l~~~~~~v~Gv~v~~~~g---~~~a~~VVlAtGg~~~~~~~ 181 (472)
T 2e5v_A 119 REIFNFLLKLAREE-GIPIIEDRLV-EIRVKDGKVTGFVTEKRGL---VEDVDKLVLATGGYSYLYEY 181 (472)
T ss_dssp HHHHHHHHHHHHHT-TCCEECCCEE-EEEEETTEEEEEEETTTEE---ECCCSEEEECCCCCGGGSSS
T ss_pred HHHHHHHHHHHHhC-CCEEEECcEE-EEEEeCCEEEEEEEEeCCC---eEEeeeEEECCCCCcccCcc
Confidence 46788888888655 89999998 8 9988888887877654334 25699999999999988654
No 85
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.98 E-value=3.1e-09 Score=114.50 Aligned_cols=65 Identities=15% Similarity=0.149 Sum_probs=52.3
Q ss_pred chHHHHHHHHHHHcCCCe-EEEece-EEEEEeeCC---eEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 137 NGRFIQRMREKAASLPNV-RLEQGT-VTSLLEENG---TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 137 r~~l~~~L~~~a~~~~~v-~i~~~~-v~~~~~~~~---~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+...|.+.+++.+|+ ++++++ ++++..+++ ++.||.+.+ .+|+...++|+.||.|+|..|..
T Consensus 150 g~~~~~~l~~~~~~~~gv~~i~~~~~v~~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 150 GESYKPIIAEAAKMAVGEENIYERVFIFELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp ETTHHHHHHHHHHHHHCGGGEECSEEEEEEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred cHHHHHHHHHHHHhcCCCcEEEecCEEEEEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 345777888777765478 899988 999988777 899988754 67776678899999999999864
No 86
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=98.97 E-value=3.3e-09 Score=104.05 Aligned_cols=113 Identities=24% Similarity=0.300 Sum_probs=77.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.++||+|||||++|+++|+.|++.|++|+|+|+.. ..... .... .. ..++ .+
T Consensus 15 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg~~----~~~~-------------~~--~~~~--~~------ 66 (319)
T 3cty_A 15 RDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAV-AGGLT----AEAP-------------LV--ENYL--GF------ 66 (319)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSS-TTGGG----GGCS-------------CB--CCBT--TB------
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCcEEEEeCCC-CCccc----cccc-------------hh--hhcC--CC------
Confidence 45899999999999999999999999999999952 22111 0000 00 0011 00
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+.+..+...|.+.+++. +++++.++++++..+++.+ .+.. ++.+ +.+|+||.|+|.++.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~~---~v~~-~~~~--~~~~~li~AtG~~~~ 127 (319)
T 3cty_A 67 KSIVGSELAKLFADHAANY-AKIREGVEVRSIKKTQGGF---DIET-NDDT--YHAKYVIITTGTTHK 127 (319)
T ss_dssp SSBCHHHHHHHHHHHHHTT-SEEEETCCEEEEEEETTEE---EEEE-SSSE--EEEEEEEECCCEEEC
T ss_pred cccCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEEeCCEE---EEEE-CCCE--EEeCEEEECCCCCcc
Confidence 1234556778888888887 7999887799998776643 2334 4543 569999999998654
No 87
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=98.97 E-value=1.9e-09 Score=106.07 Aligned_cols=116 Identities=20% Similarity=0.268 Sum_probs=78.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
..+||+||||||+|+++|+.|++.|++|+|+|+. ...... .... .. ..++ .+ .
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~~-~~gg~~----~~~~-------------~~--~~~~--~~-----~ 59 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGRAQLSTLILEKG-MPGGQI----AWSE-------------EV--ENFP--GF-----P 59 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTGGG----GGCS-------------CB--CCST--TC-----S
T ss_pred ccCCEEEECCCHHHHHHHHHHHHcCCcEEEEeCC-CCCccc----cccc-------------cc--ccCC--CC-----C
Confidence 3579999999999999999999999999999998 222211 0000 00 0010 00 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEee--CCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEE--NGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~--~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+++..+.+.|.+.+++. +++++.++++++..+ ++.. +.+...+|++ +++|+||.|+|.++.
T Consensus 60 ~~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~i~~~~~~~~~--~~v~~~~g~~--~~~~~vv~AtG~~~~ 124 (325)
T 2q7v_A 60 EPIAGMELAQRMHQQAEKF-GAKVEMDEVQGVQHDATSHPY--PFTVRGYNGE--YRAKAVILATGADPR 124 (325)
T ss_dssp SCBCHHHHHHHHHHHHHHT-TCEEEECCEEEEEECTTSSSC--CEEEEESSCE--EEEEEEEECCCEEEC
T ss_pred CCCCHHHHHHHHHHHHHHc-CCEEEeeeEEEEEeccCCCce--EEEEECCCCE--EEeCEEEECcCCCcC
Confidence 1245667888888888887 789988779888766 3320 2233445654 569999999998754
No 88
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.96 E-value=2.9e-09 Score=104.26 Aligned_cols=113 Identities=21% Similarity=0.163 Sum_probs=78.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
+.+||+|||||++|+++|+.|++.|++|+|+|++ .... +.. . .. ...++ ..
T Consensus 14 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~--~gg~----~~~------~-------~~--~~~~~--~~------ 64 (323)
T 3f8d_A 14 EKFDVIIVGLGPAAYGAALYSARYMLKTLVIGET--PGGQ----LTE------A-------GI--VDDYL--GL------ 64 (323)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS--TTGG----GGG------C-------CE--ECCST--TS------
T ss_pred CccCEEEECccHHHHHHHHHHHHCCCcEEEEecc--CCCe----ecc------c-------cc--ccccC--CC------
Confidence 3589999999999999999999999999999997 2211 110 0 00 00011 00
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+....+...|.+.+++. +++++..+|+++..+++. +.+...+|.+ +.+|.||.|+|....
T Consensus 65 ~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i~~~~~~---~~v~~~~g~~--~~~d~lvlAtG~~~~ 126 (323)
T 3f8d_A 65 IEIQASDMIKVFNKHIEKY-EVPVLLDIVEKIENRGDE---FVVKTKRKGE--FKADSVILGIGVKRR 126 (323)
T ss_dssp TTEEHHHHHHHHHHHHHTT-TCCEEESCEEEEEEC--C---EEEEESSSCE--EEEEEEEECCCCEEC
T ss_pred CCCCHHHHHHHHHHHHHHc-CCEEEEEEEEEEEecCCE---EEEEECCCCE--EEcCEEEECcCCCCc
Confidence 0145567888888888887 788888669999876553 3455667664 459999999998753
No 89
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.96 E-value=4.4e-09 Score=116.86 Aligned_cols=150 Identities=23% Similarity=0.321 Sum_probs=92.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCCC--CCccc-----------------------chhhhccccc--
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTE--PDRIV-----------------------DCVEEIDAQQ-- 104 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~~--~~r~~-----------------------~~l~~l~~~~-- 104 (502)
.++||+|||||++|+++|+.|+++|+ +|+|+||+... ...++ +.++++....
T Consensus 3 ~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~~~~gss~~~~G~~~~~~~~~~~~~l~~~s~~~~~~l~~~~~~ 82 (830)
T 1pj5_A 3 STPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLNMPGGSTSHAPGLVFQTNPSKTMASFAKYTVEKLLSLTEDGVS 82 (830)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTTCCCSGGGTCCCEECCCCSCHHHHHHHHHHHHHHHHCEETTEE
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCCCCcccceeCCceeecCCCCHHHHHHHHHHHHHHHHHHhhCCC
Confidence 35899999999999999999999999 99999998642 11111 2222222110
Q ss_pred ---cceEEEEECCce------------------e-ee-------eccCcCCC------CCCcceeecchHHHHHHHHHHH
Q 010765 105 ---VLGYALFKDGKS------------------T-RL-------SYPLEKFH------ADVSGRSFHNGRFIQRMREKAA 149 (502)
Q Consensus 105 ---~~g~~~~~~g~~------------------~-~~-------~~~~~~~~------~~~~g~~i~r~~l~~~L~~~a~ 149 (502)
..+......... . .+ .++..... ..+....++...+...|.+.++
T Consensus 83 ~~~~~G~l~~~~~~~~~~~l~~~~~~~~~~G~~~~~l~~~e~~~~~p~l~~~~~~gg~~~~~~g~v~p~~l~~~L~~~a~ 162 (830)
T 1pj5_A 83 CFNQVGGLEVATTETRLADLKRKLGYAAAWGIEGRLLSPAECQELYPLLDGENILGGLHVPSDGLASAARAVQLLIKRTE 162 (830)
T ss_dssp SEECCCEEEEESSHHHHHHHHHHHHHHHHHTCCCEEECHHHHHHHCTTSCGGGCCEEEEETTCEEECHHHHHHHHHHHHH
T ss_pred CeeecCcEEEEeCHHHHHHHHHHHHHHHHcCCCeEEECHHHHHHhCccCCccceEEEEEECCCceEcHHHHHHHHHHHHH
Confidence 001111111000 0 00 00100000 0112234577789999999999
Q ss_pred cCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh-hhhhcCC
Q 010765 150 SLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL-RRSLCKP 208 (502)
Q Consensus 150 ~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v-R~~l~~~ 208 (502)
+. |+++++++ |+++..+++++.+|. +.+| +++||.||.|+|.+|.. .+.++..
T Consensus 163 ~~-Gv~i~~~t~V~~i~~~~~~v~~V~--t~~G---~i~Ad~VV~AaG~~s~~l~~~~g~~ 217 (830)
T 1pj5_A 163 SA-GVTYRGSTTVTGIEQSGGRVTGVQ--TADG---VIPADIVVSCAGFWGAKIGAMIGMA 217 (830)
T ss_dssp HT-TCEEECSCCEEEEEEETTEEEEEE--ETTE---EEECSEEEECCGGGHHHHHHTTTCC
T ss_pred Hc-CCEEECCceEEEEEEeCCEEEEEE--ECCc---EEECCEEEECCccchHHHHHHhCCC
Confidence 88 89999887 999998888765543 4555 36799999999999853 3444443
No 90
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=98.95 E-value=1.8e-09 Score=106.17 Aligned_cols=117 Identities=16% Similarity=0.159 Sum_probs=80.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.+||+|||||++|+++|+.|++.|++|+|+|+.+.... .+.... ..... ..++ . ..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~~~gG----~~~~~~----~~~~~--------~~~~-----~---~~ 62 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQASVKIIESLPQLGG----QLSALY----PEKYI--------YDVA-----G---FP 62 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCH----HHHHHC----TTSEE--------CCST-----T---CS
T ss_pred cceEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCc----eehhcC----CCceE--------eccC-----C---CC
Confidence 47999999999999999999999999999999865332 111100 00000 0000 0 01
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
.+....+...|.+.+.+. +++++.++ |+++..+++. .+.+...+|+ +.+|+||.|+|.+|.
T Consensus 63 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~i~~~~~~--~~~v~~~~g~---~~~d~vVlAtG~~~~ 124 (332)
T 3lzw_A 63 KIRAQELINNLKEQMAKF-DQTICLEQAVESVEKQADG--VFKLVTNEET---HYSKTVIITAGNGAF 124 (332)
T ss_dssp SEEHHHHHHHHHHHHTTS-CCEEECSCCEEEEEECTTS--CEEEEESSEE---EEEEEEEECCTTSCC
T ss_pred CCCHHHHHHHHHHHHHHh-CCcEEccCEEEEEEECCCC--cEEEEECCCE---EEeCEEEECCCCCcC
Confidence 245677888999888887 79999876 9999877652 1334556664 569999999999653
No 91
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=98.95 E-value=7.8e-09 Score=103.41 Aligned_cols=36 Identities=36% Similarity=0.665 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+.++||+|||||++|+++|+.|+++|.+|+|+||..
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~~V~vle~~~ 39 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARDL 39 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCEEEEEeccC
Confidence 456899999999999999999999999999999974
No 92
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.93 E-value=1.8e-09 Score=113.78 Aligned_cols=136 Identities=15% Similarity=0.167 Sum_probs=86.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHh-hCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcC---CCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLG-KDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK---FHA 128 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La-~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~---~~~ 128 (502)
.++||+|||||++|+++|+.|+ +.|++|+|+|+++...+ .+... ...+......... ..+.... ...
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~~v~viE~~~~~GG----tw~~~---~ypg~~~d~~s~~--~~~~~~~~~~~~~ 77 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGLTTVGFDKADGPGG----TWYWN---RYPGALSDTESHL--YRFSFDRDLLQES 77 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSSCT----HHHHC---CCTTCEEEEEGGG--SSCCSCHHHHHHC
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEECCCCCCC----ccccc---CCCCceecCCcce--eeeccccccccCC
Confidence 3579999999999999999999 99999999999864432 11111 1111111000000 0000000 000
Q ss_pred CCcceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 129 DVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 129 ~~~g~~i~r~~l~~~L~~~a~~~~~v--~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
........+..+.+.|.+.+++. ++ .+++++ |+++..+++.. .+.+..++|++ ++||+||.|+|..|.-
T Consensus 78 ~~~~~~~~~~ei~~~l~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~~~V~~~~G~~--i~ad~lV~AtG~~s~p 149 (540)
T 3gwf_A 78 TWKTTYITQPEILEYLEDVVDRF-DLRRHFKFGTEVTSALYLDDEN-LWEVTTDHGEV--YRAKYVVNAVGLLSAI 149 (540)
T ss_dssp CCSBSEEEHHHHHHHHHHHHHHT-TCGGGEEESCCEEEEEEETTTT-EEEEEETTSCE--EEEEEEEECCCSCCSB
T ss_pred CCcccCCCHHHHHHHHHHHHHHc-CCcceeEeccEEEEEEEeCCCC-EEEEEEcCCCE--EEeCEEEECCcccccC
Confidence 11123467788899999888887 66 788887 99988765411 23455677875 4599999999987753
No 93
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.92 E-value=5.7e-09 Score=110.30 Aligned_cols=138 Identities=22% Similarity=0.183 Sum_probs=83.2
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCC---CC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKF---HA 128 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~---~~ 128 (502)
..++||+|||||++|+++|+.|++.|++|+|+|+.+...+ .+..- ...+... +.......+..... ..
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG----~w~~~---~~pg~~~--d~~~~~~~~~f~~~~~~~~ 84 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGRSVHVIETAGDVGG----VWYWN---RYPGARC--DIESIEYCYSFSEEVLQEW 84 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----HHHHC---CCTTCBC--SSCTTTSSCCSCHHHHHHC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC----ccccc---CCCceee--cccccccccccChhhhhcc
Confidence 4468999999999999999999999999999999865432 11100 0000000 00000000000000 00
Q ss_pred CCcceeecchHHHHHHHHHHHcCC-CeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 129 DVSGRSFHNGRFIQRMREKAASLP-NVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 129 ~~~g~~i~r~~l~~~L~~~a~~~~-~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
........+..+.+.|.+.+++.+ ++.+++++ |+++..+++.. .+.+..++|++ ++||+||.|+|.+|.-
T Consensus 85 ~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~--~~ad~vV~AtG~~s~p 156 (542)
T 1w4x_A 85 NWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATN-TWTVDTNHGDR--IRARYLIMASGQLSVP 156 (542)
T ss_dssp CCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--EEEEEEEECCCSCCCC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCC-eEEEEECCCCE--EEeCEEEECcCCCCCC
Confidence 001123456778888887777653 35688887 99988765310 23355667864 5699999999998754
No 94
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.91 E-value=6.1e-09 Score=107.89 Aligned_cols=144 Identities=15% Similarity=0.209 Sum_probs=84.3
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCe---EEEEecCCCCCCcccchh-hhccccccce-EEEEE----CCceeeeecc
Q 010765 55 TDVIIVGAGVAGAALAHTLGK---DGRR---VHVIERDVTEPDRIVDCV-EEIDAQQVLG-YALFK----DGKSTRLSYP 122 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~---~G~~---v~lvEr~~~~~~r~~~~l-~~l~~~~~~g-~~~~~----~g~~~~~~~~ 122 (502)
.||+|||||++|+++|..|++ .|++ |+|||+.+...+...... .......... ..++. +.......++
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~GG~w~~~~~~g~~~~g~~~~~~~y~~l~~~~~~~~~~~~ 82 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWGGQWNYTWRTGLDENGEPVHSSMYRYLWSNGPKECLEFA 82 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSCGGGSCCSCCSBCTTSSBCCCCCCTTCBCSSCGGGTCBT
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCCCEeecCCCCCccccCCCCcCccccchhhcCChhhcccC
Confidence 599999999999999999999 9999 999999865432110000 0000000000 00000 0000000000
Q ss_pred CcCCCC-----CCcceeecchHHHHHHHHHHHcCCCeE--EEece-EEEEEeeCC--eEEEEEEEe-CCCcEEEEecCEE
Q 010765 123 LEKFHA-----DVSGRSFHNGRFIQRMREKAASLPNVR--LEQGT-VTSLLEENG--TIKGVQYKT-KDGQELRAYAPLT 191 (502)
Q Consensus 123 ~~~~~~-----~~~g~~i~r~~l~~~L~~~a~~~~~v~--i~~~~-v~~~~~~~~--~v~~v~~~~-~~G~~~~v~ad~v 191 (502)
++.. ......+++..+.+.|.+.+++. +++ +++++ |+++..+++ .+ .|++.+ .+|+..++.+|.|
T Consensus 83 --~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~-gv~~~i~~~~~V~~v~~~~~~~~~-~V~~~~~~~g~~~~~~~d~V 158 (464)
T 2xve_A 83 --DYTFDEHFGKPIASYPPREVLWDYIKGRVEKA-GVRKYIRFNTAVRHVEFNEDSQTF-TVTVQDHTTDTIYSEEFDYV 158 (464)
T ss_dssp --TBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHH-TCGGGEECSEEEEEEEEETTTTEE-EEEEEETTTTEEEEEEESEE
T ss_pred --CCCCCcccCCCCCCCCCHHHHHHHHHHHHHHc-CCcceEEeCCEEEEEEEcCCCCcE-EEEEEEcCCCceEEEEcCEE
Confidence 0000 00122356788888898888877 676 88887 999987654 33 355544 3465456789999
Q ss_pred EEecCCCchhh
Q 010765 192 IVCDGCFSNLR 202 (502)
Q Consensus 192 I~ADG~~S~vR 202 (502)
|.|+|.+|.-+
T Consensus 159 VvAtG~~s~p~ 169 (464)
T 2xve_A 159 VCCTGHFSTPY 169 (464)
T ss_dssp EECCCSSSSBC
T ss_pred EECCCCCCCCc
Confidence 99999877544
No 95
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.89 E-value=2.9e-09 Score=104.39 Aligned_cols=114 Identities=15% Similarity=0.227 Sum_probs=77.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.+||+|||||++|+++|+.|++.|++|+|+|+.. ... .+.... .. ..++ . ...
T Consensus 5 ~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg----~~~~~~-------------~~--~~~~-----~--~~~ 57 (320)
T 1trb_A 5 HSKLLILGSGPAGYTAAVYAARANLQPVLITGME-KGG----QLTTTT-------------EV--ENWP-----G--DPN 57 (320)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCCEEECCSS-TTG----GGGGCS-------------BC--CCST-----T--CCS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEccCC-CCc----eEecch-------------hh--hhCC-----C--CCC
Confidence 5799999999999999999999999999999752 111 110000 00 0000 0 001
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
.+.+..+...+.+.+.+. +++++.++++.+..+++.+. + ..+|.. +.+|+||.|+|.++..
T Consensus 58 ~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~i~~~~~~~~---v-~~~~~~--~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 58 DLTGPLLMERMHEHATKF-ETEIIFDHINKVDLQNRPFR---L-NGDNGE--YTCDALIIATGASARY 118 (320)
T ss_dssp SCBHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSEE---E-EESSCE--EEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHC-CCEEEEeeeeEEEecCCEEE---E-EeCCCE--EEcCEEEECCCCCcCC
Confidence 244567777788877777 79999999888876655432 3 345654 4599999999987643
No 96
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=98.89 E-value=4.2e-09 Score=104.14 Aligned_cols=116 Identities=23% Similarity=0.267 Sum_probs=78.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
+..+||+|||||++|+++|+.|++.|++|+|+|+.. ... .+.... .. ..++ ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~~~-~gg----~~~~~~-------------~~--~~~~-------~~ 64 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAARAQLAPLVFEGTS-FGG----ALMTTT-------------DV--ENYP-------GF 64 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHHTTCCCEEECCSS-CSC----GGGSCS-------------CB--CCST-------TC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEecCC-CCC----ceeccc-------------hh--hhcC-------CC
Confidence 456899999999999999999999999999999752 111 110000 00 0000 00
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEE-EeCCCcEEEEecCEEEEecCCCchh
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQY-KTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~-~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+..+...|.+.+.+. +++++.++++++.. ++. +.+ ...+|++ +.+|+||.|+|.++..
T Consensus 65 ~~~~~~~~~~~~l~~~~~~~-~v~~~~~~v~~i~~-~~~---~~v~~~~~g~~--~~~d~lviAtG~~~~~ 128 (335)
T 2a87_A 65 RNGITGPELMDEMREQALRF-GADLRMEDVESVSL-HGP---LKSVVTADGQT--HRARAVILAMGAAARY 128 (335)
T ss_dssp TTCBCHHHHHHHHHHHHHHT-TCEEECCCEEEEEC-SSS---SEEEEETTSCE--EEEEEEEECCCEEECC
T ss_pred CCCCCHHHHHHHHHHHHHHc-CCEEEEeeEEEEEe-CCc---EEEEEeCCCCE--EEeCEEEECCCCCccC
Confidence 11245567788888888777 79999998888876 332 223 3556764 4599999999987643
No 97
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=98.86 E-value=1e-08 Score=106.15 Aligned_cols=142 Identities=18% Similarity=0.185 Sum_probs=84.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-----CeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG-----RRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFH 127 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G-----~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~ 127 (502)
..+||+|||||++|+++|..|++.| ++|+|||+.+....+....+.....+. .+. ........+...+.
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~~v~liE~~~~~g~~~~~~~~~~~~~~----~~~--~~l~~~~~p~~~~~ 102 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQERAQAQGALEVLFLDKQGDYRWHGNTLVSQSELQI----SFL--KDLVSLRNPTSPYS 102 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHHHHHHHCCCCEEEEESCSSCCSSGGGCCSSCBCSS----CTT--SSSSTTTCTTCTTS
T ss_pred CcCCEEEECCCHHHHHHHHHHHhcccccCcccEEEEecCCCCCCcCCCCCCCCcCCc----chh--hccccccCCCCCCC
Confidence 4579999999999999999999999 999999999754321110000000000 000 00000000000000
Q ss_pred --------------CCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEee--CCeEEEEEEEe--CCCcEEEEec
Q 010765 128 --------------ADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE--NGTIKGVQYKT--KDGQELRAYA 188 (502)
Q Consensus 128 --------------~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~--~~~v~~v~~~~--~~G~~~~v~a 188 (502)
.........+..+...|...++.. ++++++++ |+++..+ +++...+.+.. .+|+..++++
T Consensus 103 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~ 181 (463)
T 3s5w_A 103 FVNYLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHF-QEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTT 181 (463)
T ss_dssp HHHHHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTC-TTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEE
T ss_pred hhHhhhhcCceeecccccCCCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEe
Confidence 000012235678888888888777 68888987 9888765 24443344443 3455556789
Q ss_pred CEEEEecCCCchh
Q 010765 189 PLTIVCDGCFSNL 201 (502)
Q Consensus 189 d~vI~ADG~~S~v 201 (502)
|.||.|+|....+
T Consensus 182 d~lVlAtG~~p~~ 194 (463)
T 3s5w_A 182 RALVVSPGGTPRI 194 (463)
T ss_dssp SEEEECCCCEECC
T ss_pred CEEEECCCCCCCC
Confidence 9999999985443
No 98
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.86 E-value=5.9e-09 Score=101.69 Aligned_cols=114 Identities=21% Similarity=0.254 Sum_probs=77.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
++||+||||||+|+++|..|++.|++|+|+|+... .. +... .++ ..+. . ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~~g~~v~li~~~~g--G~---~~~~------~~~----------~~~~-----~---~~ 51 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSARKGIRTGLMGERFG--GQ---ILDT------VDI----------ENYI-----S---VP 51 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHTTTCCEEEECSSTT--GG---GGGC------CEE----------CCBT-----T---BS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC--ce---eccc------ccc----------cccc-----C---cC
Confidence 37999999999999999999999999999986421 11 1110 000 0000 0 01
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC--CeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN--GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~--~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..++..+...|.+.+++. +++++.++ ++.+..+. +. ...+..++|++ +.+|.||.|+|.++..
T Consensus 52 ~~~~~~~~~~~~~~~~~~-~v~~~~~~~v~~i~~~~~~~~--~~~v~~~~g~~--~~~~~lv~AtG~~~~~ 117 (310)
T 1fl2_A 52 KTEGQKLAGALKVHVDEY-DVDVIDSQSASKLIPAAVEGG--LHQIETASGAV--LKARSIIVATGAKWRN 117 (310)
T ss_dssp SEEHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTC--CEEEEETTSCE--EEEEEEEECCCEEECC
T ss_pred CCCHHHHHHHHHHHHHHc-CCeEEccCEEEEEEecccCCc--eEEEEECCCCE--EEeCEEEECcCCCcCC
Confidence 234567788888888877 89999995 98886542 11 13344567764 4599999999987643
No 99
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.85 E-value=1.3e-08 Score=101.69 Aligned_cols=134 Identities=16% Similarity=0.194 Sum_probs=78.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCCCCCcccchhhhcccc-ccceEEEEECCceeeeeccCcCCCCC--
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPDRIVDCVEEIDAQ-QVLGYALFKDGKSTRLSYPLEKFHAD-- 129 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~~~~r~~~~l~~l~~~-~~~g~~~~~~g~~~~~~~~~~~~~~~-- 129 (502)
++||+|||||++|+++|..|++.|+ +|+|||++. ... .+...... ....... .........+........
T Consensus 4 ~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg----~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~ 77 (369)
T 3d1c_A 4 HHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGH----SFKHWPKSTRTITPSF-TSNGFGMPDMNAISMDTSPA 77 (369)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTH----HHHTSCTTCBCSSCCC-CCGGGTCCCTTCSSTTCCHH
T ss_pred cCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCC----ccccCcccccccCcch-hcccCCchhhhhcccccccc
Confidence 5799999999999999999999999 999999985 211 11100000 0000000 000000000000000000
Q ss_pred --CcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 130 --VSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 130 --~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
.....+++..+...|.+.+++. +++++.++ |+++..+++. +.+...+|+ +.+|.||.|+|.++.
T Consensus 78 ~~~~~~~~~~~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~---~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 78 FTFNEEHISGETYAEYLQVVANHY-ELNIFENTVVTNISADDAY---YTIATTTET---YHADYIFVATGDYNF 144 (369)
T ss_dssp HHHCCSSCBHHHHHHHHHHHHHHT-TCEEECSCCEEEEEECSSS---EEEEESSCC---EEEEEEEECCCSTTS
T ss_pred ccccccCCCHHHHHHHHHHHHHHc-CCeEEeCCEEEEEEECCCe---EEEEeCCCE---EEeCEEEECCCCCCc
Confidence 0011245566777888777777 79999987 9988876553 334455553 569999999999763
No 100
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.83 E-value=3e-09 Score=112.34 Aligned_cols=136 Identities=21% Similarity=0.237 Sum_probs=84.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcC---CCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEK---FHA 128 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~---~~~ 128 (502)
+.++||+|||||++|+++|+.|++.|++|+|||+++...+ .+..- ...+........ ...+.... ...
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~~G~~v~iiE~~~~~GG----tw~~~---~ypg~~~dv~s~--~y~~~f~~~~~~~~ 89 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRSQGLTVRAFEAASGVGG----VWYWN---RYPGARCDVESI--DYSYSFSPELEQEW 89 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----HHHHC---CCTTCBCSSCTT--TSSCCSCHHHHHHC
T ss_pred CCCCCEEEECchHHHHHHHHHHHhCCCCEEEEeCCCCCCC----ccccC---CCCCceeCCCch--hcccccccccccCC
Confidence 4568999999999999999999999999999999864332 11110 000000000000 00000000 000
Q ss_pred CCcceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 129 DVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 129 ~~~g~~i~r~~l~~~L~~~a~~~~~v--~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
........+..+...|.+.+++. ++ .+++++ |+++..+++.. .+.+...+|++ ++||+||.|+|..|.
T Consensus 90 ~~~~~~~~~~ei~~yl~~~~~~~-g~~~~i~~~~~V~~i~~~~~~~-~w~V~~~~G~~--i~ad~lV~AtG~~s~ 160 (549)
T 4ap3_A 90 NWSEKYATQPEILAYLEHVADRF-DLRRDIRFDTRVTSAVLDEEGL-RWTVRTDRGDE--VSARFLVVAAGPLSN 160 (549)
T ss_dssp CCSSSSCBHHHHHHHHHHHHHHT-TCGGGEECSCCEEEEEEETTTT-EEEEEETTCCE--EEEEEEEECCCSEEE
T ss_pred CCccCCCCHHHHHHHHHHHHHHc-CCCccEEECCEEEEEEEcCCCC-EEEEEECCCCE--EEeCEEEECcCCCCC
Confidence 11112356778888888888887 55 788887 99988765421 23455677875 469999999998764
No 101
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=98.82 E-value=1.8e-08 Score=98.39 Aligned_cols=118 Identities=16% Similarity=0.227 Sum_probs=76.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.|||+||||||||+++|+.|++.|++|+|+|+.........+++..- ..+ -.++ .-+ .
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~~g~~v~liE~~~~gg~~~~G~~~~~-------~~i--------~~~~-----g~~--~ 61 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGRSSLKPVMYEGFMAGGVAAGGQLTTT-------TII--------ENFP-----GFP--N 61 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCCEEECCSSGGGCCTTCGGGGS-------SEE--------CCST-----TCT--T
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEecCCCCCcccCCCcCCh-------HHh--------hhcc-----CCc--c
Confidence 48999999999999999999999999999999743111111111100 000 0011 000 1
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+...++...+.+.+.+. ++++...++.......+.. .+...++.+ +.+|.||.|+|...
T Consensus 62 ~i~~~~l~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~---~~~~~~~~~--~~~~~liiATG~~~ 121 (314)
T 4a5l_A 62 GIDGNELMMNMRTQSEKY-GTTIITETIDHVDFSTQPF---KLFTEEGKE--VLTKSVIIATGATA 121 (314)
T ss_dssp CEEHHHHHHHHHHHHHHT-TCEEECCCEEEEECSSSSE---EEEETTCCE--EEEEEEEECCCEEE
T ss_pred cCCHHHHHHHHHHHHhhc-CcEEEEeEEEEeecCCCce---EEEECCCeE--EEEeEEEEcccccc
Confidence 234456777777888777 7888888877766655432 233456665 45999999999743
No 102
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.80 E-value=4.7e-09 Score=110.81 Aligned_cols=137 Identities=18% Similarity=0.146 Sum_probs=82.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeecc--CcCC-CC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYP--LEKF-HA 128 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~--~~~~-~~ 128 (502)
+.++||+|||||++|+++|+.|++.|++|+|||+++...+ .+..- ...+... +-......+. .... ..
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~~g~~v~iiE~~~~~GG----tw~~~---~yPg~~~--d~~~~~y~~~f~~~~~~~~ 77 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQAGMKVLGIEAGEDVGG----TWYWN---RYPGCRL--DTESYAYGYFALKGIIPEW 77 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCT----HHHHC---CCTTCBC--SSCHHHHCHHHHTTSSTTC
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCCCEEEEeCCCCCCC----ccccC---CCCceee--cCchhhcccccCcccccCC
Confidence 3468999999999999999999999999999999865432 11110 0011000 0000000000 0000 00
Q ss_pred CCcceeecchHHHHHHHHHHHcCCCe--EEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 129 DVSGRSFHNGRFIQRMREKAASLPNV--RLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 129 ~~~g~~i~r~~l~~~L~~~a~~~~~v--~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
........+..+...|.+.+++. ++ .+++++ |+++..+++.. .+.+..++|++ ++||+||.|+|..|.-
T Consensus 78 ~~~~~~~~~~ei~~yl~~~~~~~-~l~~~i~~~~~V~~~~~~~~~~-~w~V~~~~G~~--~~ad~lV~AtG~~s~p 149 (545)
T 3uox_A 78 EWSENFASQPEMLRYVNRAADAM-DVRKHYRFNTRVTAARYVENDR-LWEVTLDNEEV--VTCRFLISATGPLSAS 149 (545)
T ss_dssp CCSBSSCBHHHHHHHHHHHHHHH-TCGGGEECSCCEEEEEEEGGGT-EEEEEETTTEE--EEEEEEEECCCSCBC-
T ss_pred CccccCCCHHHHHHHHHHHHHHc-CCcCcEEECCEEEEEEEeCCCC-EEEEEECCCCE--EEeCEEEECcCCCCCC
Confidence 11122356677888888877776 44 677877 88887654311 24455677864 5699999999987643
No 103
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=98.77 E-value=3.8e-08 Score=96.19 Aligned_cols=113 Identities=19% Similarity=0.200 Sum_probs=66.5
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCC
Q 010765 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHAD 129 (502)
Q Consensus 50 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 129 (502)
|...+|||+||||||+|+++|+.|++.|++|+|+||... ... |+.. . .+. .++.
T Consensus 2 Mte~~yDvvIIG~GpAGl~aA~~l~~~g~~V~liE~~~~-gG~---~~~~-~--~i~-------------~~p~------ 55 (312)
T 4gcm_A 2 MTEIDFDIAIIGAGPAGMTAAVYASRANLKTVMIERGIP-GGQ---MANT-E--EVE-------------NFPG------ 55 (312)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSCT-TGG---GGGC-S--CBC-------------CSTT------
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEecCCC-CCe---eecc-c--ccC-------------CcCC------
Confidence 345679999999999999999999999999999998632 111 1110 0 000 0110
Q ss_pred CcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 130 VSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 130 ~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
-..+...++.....+...+. +..+..+. +......... ....++++ +++|.+|.|+|..
T Consensus 56 --~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--~~~d~liiAtGs~ 115 (312)
T 4gcm_A 56 --FEMITGPDLSTKMFEHAKKF-GAVYQYGDIKSVEDKGEYK-----VINFGNKE--LTAKAVIIATGAE 115 (312)
T ss_dssp --CSSBCHHHHHHHHHHHHHHT-TCEEEECCCCEEEECSSCE-----EEECSSCE--EEEEEEEECCCEE
T ss_pred --ccccchHHHHHHHHHHHhhc-cccccceeeeeeeeeecce-----eeccCCeE--EEeceeEEcccCc
Confidence 01122334555555555555 56666655 3333333222 12345554 4599999999964
No 104
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=98.75 E-value=2.5e-08 Score=104.79 Aligned_cols=115 Identities=20% Similarity=0.273 Sum_probs=78.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
+..+||+||||||+|+++|+.|++.|++|+|+|++.. +. +.... ++ ..+. .
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~~G~~v~lie~~~G--G~---~~~~~------~~----------~~~~-----~--- 260 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSARKGIRTGLMGERFG--GQ---VLDTV------DI----------ENYI-----S--- 260 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSTT--GG---GTTCS------CB----------CCBT-----T---
T ss_pred cCcccEEEECCcHHHHHHHHHHHhCCCeEEEEECCCC--Cc---ccccc------cc----------cccC-----C---
Confidence 4578999999999999999999999999999997421 11 11100 00 0000 0
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC--CeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN--GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~--~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
........+...|.+.+++. +++++.++ ++++..+. +. ...+..++|+. +++|.||.|+|.++.
T Consensus 261 ~~~~~~~~l~~~l~~~~~~~-gv~v~~~~~v~~i~~~~~~~~--~~~V~~~~g~~--~~~d~vVlAtG~~~~ 327 (521)
T 1hyu_A 261 VPKTEGQKLAGALKAHVSDY-DVDVIDSQSASKLVPAATEGG--LHQIETASGAV--LKARSIIIATGAKWR 327 (521)
T ss_dssp BSSBCHHHHHHHHHHHHHTS-CEEEECSCCEEEEECCSSTTS--CEEEEETTSCE--EEEEEEEECCCEEEC
T ss_pred CCCCCHHHHHHHHHHHHHHc-CCEEEcCCEEEEEEeccCCCc--eEEEEECCCCE--EEcCEEEECCCCCcC
Confidence 00134567888888888887 89999995 98886532 21 13344567764 559999999998754
No 105
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.72 E-value=1.9e-08 Score=104.39 Aligned_cols=132 Identities=14% Similarity=0.168 Sum_probs=77.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--ch------------hhhccc-cccceEEEEECCce
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DC------------VEEIDA-QQVLGYALFKDGKS 116 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~------------l~~l~~-~~~~g~~~~~~g~~ 116 (502)
+.++||+|||||++|+++|..|++.|++|+|||+++....... .+ ++.+.. ....++.. ...
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~--~~~- 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKV--SNV- 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEE--SCE-
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCccc--CCC-
Confidence 3468999999999999999999999999999999865433211 11 111110 00011110 000
Q ss_pred eeeeccCcCCCCCCcceeec-----chHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEE
Q 010765 117 TRLSYPLEKFHADVSGRSFH-----NGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLT 191 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~g~~i~-----r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~v 191 (502)
...+ ...+. ...+...+.+.+++. +++++.++.+.+ +.+ .+.+...+|+..++++|.+
T Consensus 81 -~~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~~~v~~~~G~~~~i~~d~l 143 (470)
T 1dxl_A 81 -EIDL----------AAMMGQKDKAVSNLTRGIEGLFKKN-KVTYVKGYGKFV--SPS---EISVDTIEGENTVVKGKHI 143 (470)
T ss_dssp -EECH----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEESCEEEE--ETT---EEEECCSSSCCEEEECSEE
T ss_pred -ccCH----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeEEEEe--cCC---EEEEEeCCCceEEEEcCEE
Confidence 0000 00111 112334445555555 799999985433 334 3445556674345779999
Q ss_pred EEecCCCchhhh
Q 010765 192 IVCDGCFSNLRR 203 (502)
Q Consensus 192 I~ADG~~S~vR~ 203 (502)
|.|+|.++.+-.
T Consensus 144 IiAtGs~p~~p~ 155 (470)
T 1dxl_A 144 IIATGSDVKSLP 155 (470)
T ss_dssp EECCCEEECCBT
T ss_pred EECCCCCCCCCC
Confidence 999998776544
No 106
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.72 E-value=1.8e-08 Score=104.40 Aligned_cols=131 Identities=15% Similarity=0.146 Sum_probs=75.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc---------------chhhhcc-ccccceEEEEECCcee
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV---------------DCVEEID-AQQVLGYALFKDGKST 117 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~---------------~~l~~l~-~~~~~g~~~~~~g~~~ 117 (502)
++||+||||||+|+++|+.|++.|++|+|+|++. ... .+ +.++.+. .....++. .. .
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~~V~liE~~~-~gG-~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~--~~-~-- 75 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGLSTAIVEPKY-WGG-VCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS--GE-V-- 75 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSC-TTH-HHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE--EC-C--
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCC-CCC-cccccCchhhHHHHHHHHHHHHHHHHHHhcCCC--CC-C--
Confidence 4799999999999999999999999999999982 221 11 1111111 00011221 00 0
Q ss_pred eeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCC
Q 010765 118 RLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGC 197 (502)
Q Consensus 118 ~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~ 197 (502)
...+. .... .... ....+...+.+.+++. +++++.++... .+.+ .+++...+|+..++++|.+|.|+|.
T Consensus 76 ~~~~~--~~~~-~~~~--~~~~l~~~l~~~~~~~-gv~~~~g~~~~--id~~---~v~V~~~~G~~~~~~~d~lViAtG~ 144 (464)
T 2a8x_A 76 TFDYG--IAYD-RSRK--VAEGRVAGVHFLMKKN-KITEIHGYGTF--ADAN---TLLVDLNDGGTESVTFDNAIIATGS 144 (464)
T ss_dssp EECHH--HHHH-HHHH--HHHHHHHHHHHHHHHT-TCEEECEEEEE--SSSS---EEEEEETTSCCEEEEEEEEEECCCE
T ss_pred ccCHH--HHHH-HHHH--HHHHHHHHHHHHHHhC-CCEEEEeEEEE--ecCC---eEEEEeCCCceEEEEcCEEEECCCC
Confidence 01100 0000 0000 0123455566666665 89999988443 2334 3456666774345679999999999
Q ss_pred Cchhh
Q 010765 198 FSNLR 202 (502)
Q Consensus 198 ~S~vR 202 (502)
++.+.
T Consensus 145 ~~~~~ 149 (464)
T 2a8x_A 145 STRLV 149 (464)
T ss_dssp EECCC
T ss_pred CCCCC
Confidence 87553
No 107
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.71 E-value=7.6e-08 Score=93.75 Aligned_cols=113 Identities=21% Similarity=0.369 Sum_probs=75.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEE-EecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHV-IERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~l-vEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
..+||+|||||++|+++|..|++.|++|+| +||. ..... +.... . ...++ . .
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~~v~li~e~~-~~gG~----~~~~~-------------~--~~~~~-----~--~ 55 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGLKNVVMFEKG-MPGGQ----ITSSS-------------E--IENYP-----G--V 55 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTCSCEEEECSS-STTGG----GGGCS-------------C--BCCST-----T--C
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCCCeEEEEeCC-CCCce----eeeec-------------e--eccCC-----C--C
Confidence 457999999999999999999999999999 9994 22211 10000 0 00011 0 0
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeC--CeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEEN--GTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~--~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
...+....+...+.+.+++. +++++.++++++ .++ +.+. +.+ .++. ++.+|.||.|.|...
T Consensus 56 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~v~~i-~~~~~~~~~-v~~--~~~~--~~~~d~lvlAtG~~~ 118 (315)
T 3r9u_A 56 AQVMDGISFMAPWSEQCMRF-GLKHEMVGVEQI-LKNSDGSFT-IKL--EGGK--TELAKAVIVCTGSAP 118 (315)
T ss_dssp CSCBCHHHHHHHHHHHHTTT-CCEEECCCEEEE-EECTTSCEE-EEE--TTSC--EEEEEEEEECCCEEE
T ss_pred CCCCCHHHHHHHHHHHHHHc-CcEEEEEEEEEE-ecCCCCcEE-EEE--ecCC--EEEeCEEEEeeCCCC
Confidence 01245567888888888887 799999998888 555 4322 212 2233 567999999999743
No 108
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=98.70 E-value=4.3e-09 Score=104.80 Aligned_cols=32 Identities=25% Similarity=0.392 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCC------CeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG------RRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G------~~v~lvEr~~ 87 (502)
||+|||||++||++|+.|+++| .+|+|+|++.
T Consensus 2 dVvIIGgGi~Gls~A~~La~~G~~~~p~~~V~vlE~~~ 39 (351)
T 3g3e_A 2 RVVVIGAGVIGLSTALCIHERYHSVLQPLDIKVYADRF 39 (351)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHTTTSSSCEEEEEESSC
T ss_pred cEEEECCCHHHHHHHHHHHHhccccCCCceEEEEECCC
Confidence 8999999999999999999998 9999999985
No 109
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.62 E-value=4.8e-08 Score=101.56 Aligned_cols=36 Identities=28% Similarity=0.363 Sum_probs=33.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
++||+||||||+|+++|+.|++.|++|+|+|+++..
T Consensus 5 ~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~~ 40 (478)
T 1v59_A 5 SHDVVIIGGGPAGYVAAIKAAQLGFNTACVEKRGKL 40 (478)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred cCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCc
Confidence 479999999999999999999999999999996543
No 110
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.61 E-value=5.1e-08 Score=99.21 Aligned_cols=110 Identities=19% Similarity=0.216 Sum_probs=70.3
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~---~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
.+|+|||||++|+++|..|++ .|++|+|||+++....+ .. .. ......
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~--------------------~~-~~--~~~~~~------ 52 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFR--------------------PA-LP--HVAIGV------ 52 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEEC--------------------CS-SC--CCCSSC------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceec--------------------cc-hh--hcccCC------
Confidence 379999999999999999999 89999999998521000 00 00 000000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
.....+...+.+.+.+. +++++.++|+++..++.. |++.+.+++..++.+|.||.|.|....
T Consensus 53 ---~~~~~~~~~~~~~~~~~-gv~~~~~~v~~i~~~~~~---V~~~~g~~~~~~~~~d~lViAtG~~~~ 114 (409)
T 3h8l_A 53 ---RDVDELKVDLSEALPEK-GIQFQEGTVEKIDAKSSM---VYYTKPDGSMAEEEYDYVIVGIGAHLA 114 (409)
T ss_dssp ---CCCCCEEEEHHHHTGGG-TCEEEECEEEEEETTTTE---EEEECTTSCEEEEECSEEEECCCCEEC
T ss_pred ---cCHHHHHHHHHHHHhhC-CeEEEEeeEEEEeCCCCE---EEEccCCcccceeeCCEEEECCCCCcC
Confidence 00001111233334444 799998888888776653 445555555566789999999998554
No 111
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.61 E-value=7.2e-08 Score=100.58 Aligned_cols=128 Identities=20% Similarity=0.262 Sum_probs=71.6
Q ss_pred CCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--chh------------hhccc-cccceEEEEECCc
Q 010765 51 NGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DCV------------EEIDA-QQVLGYALFKDGK 115 (502)
Q Consensus 51 ~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~l------------~~l~~-~~~~g~~~~~~g~ 115 (502)
.++++||+||||||+|+++|..|++.|++|+||||+....+... +|+ +.+.. ....++.. ...
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~--~~~ 99 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQLGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEV--ANP 99 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEEC--CCC
T ss_pred hcccCCEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCccc--CCC
Confidence 35579999999999999999999999999999998754332111 111 11000 01111110 000
Q ss_pred eeeeeccCcCCCCCCcceeecc-----hHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCE
Q 010765 116 STRLSYPLEKFHADVSGRSFHN-----GRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPL 190 (502)
Q Consensus 116 ~~~~~~~~~~~~~~~~g~~i~r-----~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~ 190 (502)
...+. ..+.+ ..+...+...+.+. ++++..++...+ +.+ .+.+...+|+..++.+|.
T Consensus 100 --~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~g~~~~~--~~~---~~~v~~~~g~~~~~~~d~ 161 (491)
T 3urh_A 100 --KLNLQ----------KMMAHKDATVKSNVDGVSFLFKKN-KIDGFQGTGKVL--GQG---KVSVTNEKGEEQVLEAKN 161 (491)
T ss_dssp --EECHH----------HHHHHHHHHHHHHHHHHHHHHHHT-TCEEEESEEEEC--SSS---EEEEECTTSCEEEEECSE
T ss_pred --ccCHH----------HHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEe--cCC---EEEEEeCCCceEEEEeCE
Confidence 00000 00000 11223333444454 799998885442 233 355667778666788999
Q ss_pred EEEecCCC
Q 010765 191 TIVCDGCF 198 (502)
Q Consensus 191 vI~ADG~~ 198 (502)
||.|+|..
T Consensus 162 lViATGs~ 169 (491)
T 3urh_A 162 VVIATGSD 169 (491)
T ss_dssp EEECCCEE
T ss_pred EEEccCCC
Confidence 99999965
No 112
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.59 E-value=1.7e-07 Score=97.27 Aligned_cols=131 Identities=15% Similarity=0.119 Sum_probs=73.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--chh------------hhcc--ccccceEEEEECCce
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DCV------------EEID--AQQVLGYALFKDGKS 116 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~l------------~~l~--~~~~~g~~~~~~g~~ 116 (502)
.++||+|||||++|+++|..|++.|++|+|||+++....... +++ +.+. .....++. ...
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~--~~~-- 80 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIE--MSE-- 80 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEE--ESC--
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccc--cCC--
Confidence 358999999999999999999999999999999854322110 111 1110 00001111 000
Q ss_pred eeeeccCcCCCCCCcceeecc----hHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEE
Q 010765 117 TRLSYPLEKFHADVSGRSFHN----GRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTI 192 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~g~~i~r----~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI 192 (502)
....+ ....-.. ..+...+.+.+++. +++++.++.+.+ +.+ .+.+...+|...++++|.||
T Consensus 81 ~~~~~---------~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~~--~~~---~~~v~~~~gg~~~~~~d~lV 145 (474)
T 1zmd_A 81 VRLNL---------DKMMEQKSTAVKALTGGIAHLFKQN-KVVHVNGYGKIT--GKN---QVTATKADGGTQVIDTKNIL 145 (474)
T ss_dssp EEECH---------HHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEESEEEEE--ETT---EEEEECTTSCEEEEEEEEEE
T ss_pred CccCH---------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEe--cCC---EEEEEecCCCcEEEEeCEEE
Confidence 00000 0000001 11333345555555 899999986544 344 34455666333356799999
Q ss_pred EecCCCchhh
Q 010765 193 VCDGCFSNLR 202 (502)
Q Consensus 193 ~ADG~~S~vR 202 (502)
.|+|.++.+.
T Consensus 146 iAtGs~p~~p 155 (474)
T 1zmd_A 146 IATGSEVTPF 155 (474)
T ss_dssp ECCCEEECCC
T ss_pred ECCCCCCCCC
Confidence 9999876543
No 113
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.58 E-value=1.4e-07 Score=97.50 Aligned_cols=126 Identities=16% Similarity=0.232 Sum_probs=73.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--chh------------hhccccccceEEEEECCceeee
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DCV------------EEIDAQQVLGYALFKDGKSTRL 119 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~l------------~~l~~~~~~g~~~~~~g~~~~~ 119 (502)
++||+|||||++|+++|..|++.|++|+|+|+. ....... .++ +.+......++.. ... ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~-~~gG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~g~~~--~~~--~~ 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQKVTIVEKG-NLGGVCLNVGCIPSKALISASHRYEQAKHSEEMGIKA--ENV--TI 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CTTHHHHHTSHHHHHHHHHHHHHHHHHHTCGGGTEEC--CSC--EE
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEECC-CCCCcCcCcCchhhHHHHHHHHHHHHHHHHHhcCccc--CCC--cc
Confidence 479999999999999999999999999999997 3221100 111 1111000111110 000 00
Q ss_pred eccCcCCCCCCcceeecc-----hHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEe
Q 010765 120 SYPLEKFHADVSGRSFHN-----GRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVC 194 (502)
Q Consensus 120 ~~~~~~~~~~~~g~~i~r-----~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~A 194 (502)
. ....+.+ ..+...+.+.+++. +++++.++.+.+ +.+. +.+...+|+ .++++|.+|.|
T Consensus 78 ~----------~~~~~~~~~~~~~~l~~~~~~~~~~~-gv~~~~g~~~~i--d~~~---v~V~~~~G~-~~i~~d~lViA 140 (455)
T 1ebd_A 78 D----------FAKVQEWKASVVKKLTGGVEGLLKGN-KVEIVKGEAYFV--DANT---VRVVNGDSA-QTYTFKNAIIA 140 (455)
T ss_dssp C----------HHHHHHHHHHHHHHHHHHHHHHHHTT-TCEEEESEEEEE--ETTE---EEEEETTEE-EEEECSEEEEC
T ss_pred C----------HHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEc--cCCe---EEEEeCCCc-EEEEeCEEEEe
Confidence 0 0001111 12444455666665 899999985443 3443 455566663 34679999999
Q ss_pred cCCCchh
Q 010765 195 DGCFSNL 201 (502)
Q Consensus 195 DG~~S~v 201 (502)
+|.++..
T Consensus 141 TGs~p~~ 147 (455)
T 1ebd_A 141 TGSRPIE 147 (455)
T ss_dssp CCEEECC
T ss_pred cCCCCCC
Confidence 9986544
No 114
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.58 E-value=1.2e-07 Score=98.28 Aligned_cols=132 Identities=22% Similarity=0.203 Sum_probs=72.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--chhhhcc-ccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DCVEEID-AQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~l~~l~-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
++||+|||||++|+++|..|++.|++|+||||+....+... +|+..-. ......+... ...... ....+.
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~-----~~~~~~--~~~~~~ 76 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAKAKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRL-----TNIANV--KIPLDF 76 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHH-----HHHHCS--CCCCCH
T ss_pred cceEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHH-----HhcccC--CCCcCH
Confidence 58999999999999999999999999999998754332111 1111000 0000000000 000000 000000
Q ss_pred cceeecchHHH-----HHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 131 SGRSFHNGRFI-----QRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 131 ~g~~i~r~~l~-----~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
....-....+. ..+.+.+++. +++++.+++..+. .+ .+.+..++|+..++.+|.+|.|.|..
T Consensus 77 ~~~~~~~~~~~~l~~~~~~~~~~~~~-~v~~~~g~v~~id--~~---~~~V~~~~g~~~~~~~d~lviAtG~~ 143 (466)
T 3l8k_A 77 STVQDRKDYVQELRFKQHKRNMSQYE-TLTFYKGYVKIKD--PT---HVIVKTDEGKEIEAETRYMIIASGAE 143 (466)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCT-TEEEESEEEEEEE--TT---EEEEEETTSCEEEEEEEEEEECCCEE
T ss_pred HHHHHHHHhheeccccchHHHHHHhC-CCEEEEeEEEEec--CC---eEEEEcCCCcEEEEecCEEEECCCCC
Confidence 00000111122 3344444444 8999998876664 33 34556777876556799999999964
No 115
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.57 E-value=1.1e-07 Score=98.75 Aligned_cols=114 Identities=16% Similarity=0.139 Sum_probs=69.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
..||+|||||++|+++|..|++. |.+|+|||+.+......+..-..+ .+.. ...
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~------------~~~~-----------~~~- 91 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENANVVTLEKGEIYSYAQCGLPYVI------------SGAI-----------AST- 91 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSSSCCSBCGGGHHHHH------------TTSS-----------SCG-
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCCCCCCcchhh------------cCCc-----------CCH-
Confidence 36999999999999999999996 999999999865322111110000 0000 000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCch
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+.....+.+.+..+++++.++ ++.+..++.. |.+.+ .+|+..++.+|.+|.|+|....
T Consensus 92 ------~~l~~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~---v~v~~~~~g~~~~~~~d~lviAtG~~p~ 153 (480)
T 3cgb_A 92 ------EKLIARNVKTFRDKYGIDAKVRHEVTKVDTEKKI---VYAEHTKTKDVFEFSYDRLLIATGVRPV 153 (480)
T ss_dssp ------GGGBSSCHHHHHHTTCCEEESSEEEEEEETTTTE---EEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred ------HHhhhcCHHHHHhhcCCEEEeCCEEEEEECCCCE---EEEEEcCCCceEEEEcCEEEECCCCccc
Confidence 00000011222222379999876 8888766653 44555 4576455779999999997543
No 116
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.56 E-value=1.2e-07 Score=97.29 Aligned_cols=110 Identities=25% Similarity=0.340 Sum_probs=67.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
++||+|||||++|+++|..|++.|. +|+|+|+.+..+-.....-..+.. +. ....
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~l~~~~~~-----------~~------------~~~~ 60 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVIPHHLPPLSKAYLA-----------GK------------ATAE 60 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSCCBCSGGGGTTTTT-----------TC------------SCSG
T ss_pred CCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCCCCcCCCCcHHHhC-----------CC------------CChH
Confidence 5799999999999999999999998 799999875422100000000000 00 0000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
.... .+.+.+++. +++++.++ |+.+..++.. | ...+|++ +.+|.||.|+|.++..
T Consensus 61 ~~~~-------~~~~~~~~~-gv~~~~~~~v~~i~~~~~~---v--~~~~g~~--~~~d~lviAtG~~p~~ 116 (431)
T 1q1r_A 61 SLYL-------RTPDAYAAQ-NIQLLGGTQVTAINRDRQQ---V--ILSDGRA--LDYDRLVLATGGRPRP 116 (431)
T ss_dssp GGBS-------SCHHHHHHT-TEEEECSCCEEEEETTTTE---E--EETTSCE--EECSEEEECCCEEECC
T ss_pred Hhcc-------cCHHHHHhC-CCEEEeCCEEEEEECCCCE---E--EECCCCE--EECCEEEEcCCCCccC
Confidence 0000 011222334 89999987 8888765543 3 2456764 5699999999987644
No 117
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.55 E-value=9.6e-08 Score=94.43 Aligned_cols=100 Identities=24% Similarity=0.334 Sum_probs=65.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC------Ccccc------------------hhhhccccccceEEE
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP------DRIVD------------------CVEEIDAQQVLGYAL 110 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~------~r~~~------------------~l~~l~~~~~~g~~~ 110 (502)
.||+|||||++|+.+|+.|++.|++|+|+|+++... +++.+ +.+++++. |..+
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaL---Gg~m 78 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRA---GSLV 78 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHH---TCHH
T ss_pred CCEEEECchHHHHHHHHHHHHCCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHc---CChH
Confidence 599999999999999999999999999999986321 11111 11222111 0000
Q ss_pred EECCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEeceEEEEE
Q 010765 111 FKDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLL 165 (502)
Q Consensus 111 ~~~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~ 165 (502)
........+ | . .....++|..+.+.+.+.++++|+++++++.|+++.
T Consensus 79 ~~~aD~~~i--p-----A-g~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~ 125 (443)
T 3g5s_A 79 MEAADLARV--P-----A-GGALAVDREEFSGYITERLTGHPLLEVVREEVREIP 125 (443)
T ss_dssp HHHHHHSEE--C-----C-TTEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC
T ss_pred hhhhhhcCC--C-----C-CccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc
Confidence 000000000 1 0 112359999999999999999999999988877764
No 118
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=98.54 E-value=4.9e-07 Score=93.68 Aligned_cols=36 Identities=22% Similarity=0.406 Sum_probs=33.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEP 90 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~~~ 90 (502)
.||+|||||++||++|+.|+++|. +|+|+|++....
T Consensus 3 ~dVvVIGaGiaGLsaA~~L~~~G~~~~V~vlEa~~~~G 40 (477)
T 3nks_A 3 RTVVVLGGGISGLAASYHLSRAPCPPKVVLVESSERLG 40 (477)
T ss_dssp CEEEEECCBHHHHHHHHHHHTSSSCCEEEEECSSSSSB
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 599999999999999999999999 999999976543
No 119
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.54 E-value=9e-08 Score=99.60 Aligned_cols=36 Identities=31% Similarity=0.512 Sum_probs=33.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
++||+|||||++|+++|+.|++.|++|+|+|+++..
T Consensus 6 ~~dVvIIGaG~aGl~aA~~l~~~G~~V~liE~~~~~ 41 (482)
T 1ojt_A 6 EYDVVVLGGGPGGYSAAFAAADEGLKVAIVERYKTL 41 (482)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 579999999999999999999999999999997543
No 120
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.53 E-value=2.6e-07 Score=98.64 Aligned_cols=114 Identities=16% Similarity=0.198 Sum_probs=72.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHAD 129 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 129 (502)
+...+|+|||||++|+++|..|++. |.+|+|+|+++..+-..+.....+ .+.. ..
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~~~~~~~lp~~~------------~g~~-----------~~ 90 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVERGEYISFANCGLPYYI------------GGVI-----------TE 90 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHH------------TTSS-----------CC
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEECCCCccccCCCCchhh------------cCcC-----------CC
Confidence 4567999999999999999999998 899999999865321111110000 0000 00
Q ss_pred CcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 130 VSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 130 ~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
....+...+...++.. +++++.++ |+++..++.. +.+.+ .+|+..++.+|.+|.|.|..
T Consensus 91 ------~~~~~~~~~~~~~~~~-gi~v~~~~~V~~id~~~~~---v~v~~~~~g~~~~~~~d~lviAtG~~ 151 (588)
T 3ics_A 91 ------RQKLLVQTVERMSKRF-NLDIRVLSEVVKINKEEKT---ITIKNVTTNETYNEAYDVLILSPGAK 151 (588)
T ss_dssp ------GGGGBSSCHHHHHHHT-TCEEECSEEEEEEETTTTE---EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ------hHHhhccCHHHHHHhc-CcEEEECCEEEEEECCCCE---EEEeecCCCCEEEEeCCEEEECCCCC
Confidence 0000111222223333 78998877 8888876664 44544 46776667899999999974
No 121
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=98.53 E-value=3.1e-07 Score=95.20 Aligned_cols=37 Identities=22% Similarity=0.291 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--CeEEEEecCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEP 90 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~~~~ 90 (502)
.+||+|||||++||++|+.|+++| ++|+|+|++....
T Consensus 4 ~~~v~IiGaG~~Gl~~A~~L~~~g~~~~v~v~E~~~~~G 42 (475)
T 3lov_A 4 SKRLVIVGGGITGLAAAYYAERAFPDLNITLLEAGERLG 42 (475)
T ss_dssp SCEEEEECCBHHHHHHHHHHHHHCTTSEEEEECSSSSSB
T ss_pred cccEEEECCCHHHHHHHHHHHHhCCCCCEEEEECCCCCC
Confidence 579999999999999999999999 9999999976543
No 122
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.50 E-value=2.6e-07 Score=95.22 Aligned_cols=114 Identities=17% Similarity=0.103 Sum_probs=68.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
+||+|||||++|+++|..|++. |.+|+|+|+++......+.+...+ .+... ... +
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~------------~g~~~--~~~-------~-- 57 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDADVTAYEMNDNISFLSCGIALYL------------GKEIK--NND-------P-- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEEESSSCCCBCGGGHHHHH------------TTCBG--GGC-------G--
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCCcccccchhhh------------cCCcc--cCC-------H--
Confidence 4899999999999999999998 999999999864322111111000 00000 000 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+...+.+.+.+. +++++.++ ++.+..++.. |.+.+ .+|+..++++|.+|.|+|.+..
T Consensus 58 -----~~~~~~~~~~~~~~-gv~~~~~~~v~~i~~~~~~---v~v~~~~~g~~~~~~~d~lviAtGs~p~ 118 (452)
T 2cdu_A 58 -----RGLFYSSPEELSNL-GANVQMRHQVTNVDPETKT---IKVKDLITNEEKTEAYDKLIMTTGSKPT 118 (452)
T ss_dssp -----GGGBSCCHHHHHHT-TCEEEESEEEEEEEGGGTE---EEEEETTTCCEEEEECSEEEECCCEEEC
T ss_pred -----HHhhhcCHHHHHHc-CCEEEeCCEEEEEEcCCCE---EEEEecCCCceEEEECCEEEEccCCCcC
Confidence 00000111222334 79998887 8888766553 44544 3343445789999999996543
No 123
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.49 E-value=2.9e-07 Score=95.43 Aligned_cols=118 Identities=14% Similarity=0.142 Sum_probs=62.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
+.||+|||||++|+++|..|++. |++|+|||+++..+-..+ ++..+..+.... . ......
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~~~~~~~~------------gl~~~~~g~~~~---~-~~~~~~-- 64 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQASRISYGGC------------GIPYYVSGEVSN---I-ESLQAT-- 64 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC---------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCccccccc------------ccchhhcCCCCc---h-HHhccc--
Confidence 36999999999999999999998 999999999865321100 000000000000 0 000000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
+..+...+....+. .+++++.++ |+++..++.. +.+.+ .+|+..++.+|.+|.|.|..
T Consensus 65 -----~~~~~~~~~~~~~~-~gi~~~~~~~V~~id~~~~~---v~~~~~~~g~~~~~~~d~lviAtG~~ 124 (472)
T 3iwa_A 65 -----PYNVVRDPEFFRIN-KDVEALVETRAHAIDRAAHT---VEIENLRTGERRTLKYDKLVLALGSK 124 (472)
T ss_dssp ----------------------CEEECSEEEEEEETTTTE---EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred -----cchhccCHHHHhhh-cCcEEEECCEEEEEECCCCE---EEEeecCCCCEEEEECCEEEEeCCCC
Confidence 00011122222222 378888876 8888776664 44544 45665567899999999974
No 124
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.49 E-value=2.5e-07 Score=95.24 Aligned_cols=110 Identities=20% Similarity=0.148 Sum_probs=68.2
Q ss_pred cEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 56 DVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
||+|||||++|+++|..|++. |.+|+|||+.+......+.....+ .+.. . .....
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~~~~~~~~~~~~~~~------------~~~~-----~------~~~~~ 58 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKGDFISFLSAGMQLYL------------EGKV-----K------DVNSV 58 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESSSSSSBCGGGHHHHH------------TTSS-----C------CGGGS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECCCccCcccccchhhh------------cCcc-----C------CHHHh
Confidence 899999999999999999998 999999999864321111110000 0000 0 00000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
.. .+. +.+++. +++++.++ ++.+..++.. |.+.+ .+|+..++++|.+|.|+|...
T Consensus 59 -~~--~~~----~~~~~~-gv~~~~~~~v~~i~~~~~~---v~~~~~~~g~~~~~~~d~lviAtG~~p 115 (447)
T 1nhp_A 59 -RY--MTG----EKMESR-GVNVFSNTEITAIQPKEHQ---VTVKDLVSGEERVENYDKLIISPGAVP 115 (447)
T ss_dssp -BS--CCH----HHHHHT-TCEEEETEEEEEEETTTTE---EEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred -hc--CCH----HHHHHC-CCEEEECCEEEEEeCCCCE---EEEEecCCCceEEEeCCEEEEcCCCCc
Confidence 00 012 222334 79998887 8888766653 44555 456655678999999999754
No 125
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.49 E-value=2.4e-07 Score=96.18 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=34.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
.++||+|||||++|+++|+.|++.|++|+||||++..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~~~~ 38 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGLKTALIEKYKGK 38 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTCCEEEEECCBCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCEEEEEeCCCcc
Confidence 4689999999999999999999999999999998643
No 126
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=98.48 E-value=3.1e-07 Score=95.23 Aligned_cols=41 Identities=27% Similarity=0.453 Sum_probs=35.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
..++||+|||||++||++|+.|+++|++|+|+|++....++
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~~g~~v~v~E~~~~~GGr 54 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRSRGTDAVLLESSARLGGA 54 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHTTTCCEEEECSSSSSBTT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHCCCCEEEEEcCCCCCce
Confidence 44679999999999999999999999999999999766543
No 127
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.47 E-value=4.8e-07 Score=94.96 Aligned_cols=36 Identities=31% Similarity=0.474 Sum_probs=33.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+.++||+||||||+|+++|+.|++.|.+|+|||+.+
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~~V~liEk~~ 65 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVT 65 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCCC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEeccC
Confidence 456899999999999999999999999999999964
No 128
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.46 E-value=2.8e-07 Score=95.47 Aligned_cols=128 Identities=14% Similarity=0.186 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCccc--chh------------hhccc-cccceEEEEECCceee
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIV--DCV------------EEIDA-QQVLGYALFKDGKSTR 118 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~--~~l------------~~l~~-~~~~g~~~~~~g~~~~ 118 (502)
++||+|||||++|+++|+.|++.|++|+|||+.+....... +++ +.+.. ....++.. .+ ...
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~--~~-~~~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMG--GE-GVT 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEC--GG-GCE
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCccc--CC-CCc
Confidence 47999999999999999999999999999999854322110 111 11100 00011110 00 000
Q ss_pred eeccCcCCCCCCcceeecc-----hHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEE
Q 010765 119 LSYPLEKFHADVSGRSFHN-----GRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIV 193 (502)
Q Consensus 119 ~~~~~~~~~~~~~g~~i~r-----~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ 193 (502)
..+ ...+.+ ..+...+.+.+++. +++++.++.+.+ +.+ .+++...+|+..++++|.+|.
T Consensus 79 ~~~----------~~~~~~~~~~~~~l~~~~~~~~~~~-~v~~~~g~~~~i--~~~---~~~v~~~~G~~~~~~~d~lvi 142 (468)
T 2qae_A 79 MDS----------AKMQQQKERAVKGLTGGVEYLFKKN-KVTYYKGEGSFE--TAH---SIRVNGLDGKQEMLETKKTII 142 (468)
T ss_dssp ECH----------HHHHHHHHHHHHHHHHHHHHHHHHH-TCEEEEEEEEEE--ETT---EEEEEETTSCEEEEEEEEEEE
T ss_pred cCH----------HHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEEEEEEe--eCC---EEEEEecCCceEEEEcCEEEE
Confidence 000 000111 11233344445554 799999985543 334 345556777544577999999
Q ss_pred ecCCCch
Q 010765 194 CDGCFSN 200 (502)
Q Consensus 194 ADG~~S~ 200 (502)
|+|....
T Consensus 143 AtG~~p~ 149 (468)
T 2qae_A 143 ATGSEPT 149 (468)
T ss_dssp CCCEEEC
T ss_pred CCCCCcC
Confidence 9997543
No 129
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.46 E-value=1.6e-06 Score=90.44 Aligned_cols=63 Identities=14% Similarity=0.106 Sum_probs=47.5
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC-------eEEEEEEEe-CCCcEEEEecCEEEEecCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG-------TIKGVQYKT-KDGQELRAYAPLTIVCDGC 197 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~-------~v~~v~~~~-~~G~~~~v~ad~vI~ADG~ 197 (502)
...|.++.+.|+..++.. +..+++++ |+++...+. ....|+..+ .+|+..+++|+.||.|.|.
T Consensus 141 ~p~r~E~~~Yl~~~A~~~-~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~~~~~~g~~~~~~ar~vVlatG~ 212 (501)
T 4b63_A 141 LPARLEFEDYMRWCAQQF-SDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRSRNVETGEISARRTRKVVIAIGG 212 (501)
T ss_dssp CCBHHHHHHHHHHHHHTT-GGGEEESEEEEEEEEECSSTTSSCBCEEEEEEEETTTCCEEEEEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHc-CCceEcceEEEeeccccccccccccceEEEEEecCCCceEEEEEeCEEEECcCC
Confidence 356888999999999887 56788998 999876432 123455555 4577777889999999994
No 130
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.45 E-value=4.4e-07 Score=94.50 Aligned_cols=35 Identities=26% Similarity=0.451 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
+.++||+||||||+|+++|+.|++.|.+|+||||.
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~~G~~V~liEk~ 38 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQLGKKVAVADYV 38 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCCeEEEEEec
Confidence 34689999999999999999999999999999984
No 131
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.45 E-value=1.2e-07 Score=97.33 Aligned_cols=108 Identities=15% Similarity=0.157 Sum_probs=70.5
Q ss_pred CcEEEECCCHHHHHHHHHHhh---CCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 55 TDVIIVGAGVAGAALAHTLGK---DGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~---~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
.||+|||||++|+++|..|++ .|++|+|||+++...... .+..+.. +
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~~--~~~~~~~-----------g----------------- 54 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFVP--SNPWVGV-----------G----------------- 54 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECGG--GHHHHHH-----------T-----------------
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCcccC--Ccccccc-----------C-----------------
Confidence 599999999999999999999 899999999985211000 0000000 0
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchhh
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNLR 202 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~vR 202 (502)
......+...+.+.+++. +++++.++++.+..++.. +..++|++ +.+|+||.|+|..+..-
T Consensus 55 --~~~~~~~~~~l~~~~~~~-gv~~~~~~v~~id~~~~~-----V~~~~g~~--i~~d~lviAtG~~~~~~ 115 (437)
T 3sx6_A 55 --WKERDDIAFPIRHYVERK-GIHFIAQSAEQIDAEAQN-----ITLADGNT--VHYDYLMIATGPKLAFE 115 (437)
T ss_dssp --SSCHHHHEEECHHHHHTT-TCEEECSCEEEEETTTTE-----EEETTSCE--EECSEEEECCCCEECGG
T ss_pred --ccCHHHHHHHHHHHHHHC-CCEEEEeEEEEEEcCCCE-----EEECCCCE--EECCEEEECCCCCcCcc
Confidence 011112222334445555 899998889998776553 23566764 55999999999876543
No 132
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.44 E-value=3.1e-07 Score=95.77 Aligned_cols=113 Identities=19% Similarity=0.151 Sum_probs=68.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC---CeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG---RRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHAD 129 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G---~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 129 (502)
+++||+|||||++|+++|..|++.| .+|+|||+++......+.....+ .+.. ..
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~~V~lie~~~~~~~~~~~~~~~~------------~~~~-----------~~ 90 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDANEIVVFDQNSNISFLGAGMALWI------------GEQI-----------AG 90 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGSEEEEECSSSCCSBCGGGHHHHH------------TTSS-----------SC
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCCeEEEEECCCCCCccccccchhh------------cCcc-----------CC
Confidence 3589999999999999999999988 99999999864322111110000 0000 00
Q ss_pred CcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 130 VSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 130 ~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
+...... + .+.+++. +++++.++ ++.+..++.. |.+.. +|+..++++|.+|.|+|.+..
T Consensus 91 ~~~~~~~---~----~~~~~~~-gv~v~~~~~v~~i~~~~~~---v~v~~-~g~~~~~~~d~lviAtG~~p~ 150 (490)
T 2bc0_A 91 PEGLFYS---D----KEELESL-GAKVYMESPVQSIDYDAKT---VTALV-DGKNHVETYDKLIFATGSQPI 150 (490)
T ss_dssp SGGGBSC---C----HHHHHHT-TCEEETTCCEEEEETTTTE---EEEEE-TTEEEEEECSEEEECCCEEEC
T ss_pred HHHhhhc---C----HHHHHhC-CCEEEeCCEEEEEECCCCE---EEEEe-CCcEEEEECCEEEECCCCCcC
Confidence 0000000 1 1222334 79998887 8888766654 33431 344345779999999996543
No 133
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=98.44 E-value=8.5e-07 Score=94.92 Aligned_cols=53 Identities=11% Similarity=0.172 Sum_probs=43.0
Q ss_pred CCeEEEece-EEEEEeeCC--eEEEEEEEe-CCCcEEEEecCEEEEecCCCchhhhh
Q 010765 152 PNVRLEQGT-VTSLLEENG--TIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNLRRS 204 (502)
Q Consensus 152 ~~v~i~~~~-v~~~~~~~~--~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~vR~~ 204 (502)
+|++++.++ |+++..+++ ++.+|++.+ .+|+..++.||.||.|.|.....+-.
T Consensus 273 ~nv~v~~~~~V~~i~~~~~~~~v~GV~~~~~~~g~~~~i~A~~VIlaaG~~~s~~lL 329 (623)
T 3pl8_A 273 ERFNLFPAVACERVVRNALNSEIESLHIHDLISGDRFEIKADVYVLTAGAVHNTQLL 329 (623)
T ss_dssp EEEEEECSEEEEEEEECTTSSCEEEEEEEETTTCCEEEECEEEEEECSCTTHHHHHH
T ss_pred CCEEEEeCCEEEEEEEECCCCEEEEEEEEEcCCCcEEEEECCEEEEcCCCcCCHHHH
Confidence 478899998 899987643 788999887 57888889999999999988766543
No 134
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.44 E-value=3.9e-07 Score=95.16 Aligned_cols=131 Identities=21% Similarity=0.252 Sum_probs=72.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC---CCeEEEEecCCCCCCccc--chh------------hhccccccceEEEEECCce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDVTEPDRIV--DCV------------EEIDAQQVLGYALFKDGKS 116 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~---G~~v~lvEr~~~~~~r~~--~~l------------~~l~~~~~~g~~~~~~g~~ 116 (502)
++||+|||||++|+++|..|++. |++|+|||+.. ...... +++ +.+......++..+..+
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~~-~GG~~~~~g~~psk~l~~~a~~~~~~~~~~~~g~~~~~~~-- 78 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETTQVTVIDCDG-IGGAAVLDDCVPSKTFIASTGLRTELRRAPHLGFHIDFDD-- 78 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESSC-TTHHHHHTSHHHHHHHHHHHHHHHHHTTTTTTTBC-------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCCC-cCCcccCcCccchHHHHHHHHHHHHHHHHHhCCCccccCC--
Confidence 47999999999999999999999 99999999985 222100 111 00100000011000000
Q ss_pred eeeeccCcCCCCCCcceeecc-----hHHHHHHHHHHHcCCCeEEEeceEEEEEee---CCeEEEEEEEeCCCcEEEEec
Q 010765 117 TRLSYPLEKFHADVSGRSFHN-----GRFIQRMREKAASLPNVRLEQGTVTSLLEE---NGTIKGVQYKTKDGQELRAYA 188 (502)
Q Consensus 117 ~~~~~~~~~~~~~~~g~~i~r-----~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~---~~~v~~v~~~~~~G~~~~v~a 188 (502)
...+ ....+.+ ..+...+.+.+++. +++++.++++.+..+ ++. .+.+...+|+..++.+
T Consensus 79 ---------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-gv~~~~g~~~~i~~~~~~~~~--~~~V~~~~g~~~~~~~ 145 (499)
T 1xdi_A 79 ---------AKIS-LPQIHARVKTLAAAQSADITAQLLSM-GVQVIAGRGELIDSTPGLARH--RIKATAADGSTSEHEA 145 (499)
T ss_dssp ----------CBC-HHHHHHHHHHHHHHHHHHHHHHHHHT-TCEEEESEEEECCSSSCCSSE--EEEEECTTSCEEEEEE
T ss_pred ---------CccC-HHHHHHHHHHHHHHHHHHHHHHHHhC-CCEEEEeEEEEecCcccCCCC--EEEEEeCCCcEEEEEe
Confidence 0000 0000111 12333345555565 899999986554431 112 3556666776335679
Q ss_pred CEEEEecCCCch
Q 010765 189 PLTIVCDGCFSN 200 (502)
Q Consensus 189 d~vI~ADG~~S~ 200 (502)
|.+|.|+|....
T Consensus 146 d~lviATGs~p~ 157 (499)
T 1xdi_A 146 DVVLVATGASPR 157 (499)
T ss_dssp SEEEECCCEEEC
T ss_pred CEEEEcCCCCCC
Confidence 999999997543
No 135
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.42 E-value=4.4e-07 Score=93.56 Aligned_cols=110 Identities=17% Similarity=0.178 Sum_probs=65.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.||+|||||++|+++|..|++. |.+|+|||+.+...-..+ +...+..+.... .
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~~~~g~~~~------------~~~~~~~~~~~~-----------~-- 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQATVGYLSG------------GLSAYFNHTINE-----------L-- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSSSCCSSCCC--------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECCCCCcccCc------------cchhhhcCCCCC-----------H--
Confidence 5999999999999999999998 999999999864321000 000000000000 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
..+...+.+.+.+. +++++.++ |+++..++..+ .+... ++..++.+|.+|.|+|...
T Consensus 58 -----~~~~~~~~~~~~~~-gi~~~~~~~V~~id~~~~~v---~v~~~-~~~~~~~~d~lviAtG~~p 115 (452)
T 3oc4_A 58 -----HEARYITEEELRRQ-KIQLLLNREVVAMDVENQLI---AWTRK-EEQQWYSYDKLILATGASQ 115 (452)
T ss_dssp --------CCCCHHHHHHT-TEEEECSCEEEEEETTTTEE---EEEET-TEEEEEECSEEEECCCCCB
T ss_pred -----HHhhcCCHHHHHHC-CCEEEECCEEEEEECCCCEE---EEEec-CceEEEEcCEEEECCCccc
Confidence 00000011222334 79988776 88887766643 33322 2334577999999999854
No 136
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.42 E-value=5.7e-07 Score=90.63 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=68.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
.++.+|+|||||++|+++|..|.+.|.+|+|||+.+..+-....+-+.+. +.. +..
T Consensus 7 ~~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~~~~~~y~~~~l~~~l~------------g~~-----~~~------- 62 (385)
T 3klj_A 7 HKSTKILILGAGPAGFSAAKAALGKCDDITMINSEKYLPYYRPRLNEIIA------------KNK-----SID------- 62 (385)
T ss_dssp -CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECSSSSCCBCGGGHHHHHH------------SCC-----CGG-------
T ss_pred cCCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEECCCCCCcccChhhHHHc------------CCC-----CHH-------
Confidence 34679999999999999999998889999999998654311100000000 000 000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
.+.....+.+++. +++++.++ |+++..++.. +..++|++ +.+|.||.|.|..
T Consensus 63 -------~l~~~~~~~~~~~-~i~~~~~~~V~~id~~~~~-----v~~~~g~~--~~yd~lvlAtG~~ 115 (385)
T 3klj_A 63 -------DILIKKNDWYEKN-NIKVITSEFATSIDPNNKL-----VTLKSGEK--IKYEKLIIASGSI 115 (385)
T ss_dssp -------GTBSSCHHHHHHT-TCEEECSCCEEEEETTTTE-----EEETTSCE--EECSEEEECCCEE
T ss_pred -------HccCCCHHHHHHC-CCEEEeCCEEEEEECCCCE-----EEECCCCE--EECCEEEEecCCC
Confidence 0000111222333 89999996 9999876653 23567775 4599999999963
No 137
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.41 E-value=4.3e-07 Score=92.55 Aligned_cols=108 Identities=28% Similarity=0.222 Sum_probs=66.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCe--EEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRR--VHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~--v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
.++||+|||||++|+++|..|++.|++ |+|+|+.+..+-....+...... +. ...
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~~~-----------~~------------~~~ 64 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQNGFEGRVLVIGREPEIPYERPPLSKEYLA-----------RE------------KTF 64 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCSCEEEEESSSSCCBCSGGGGTTTTT-----------TS------------SCS
T ss_pred CCCcEEEECChHHHHHHHHHHHccCcCCCEEEEecCCCCCcCcccCCHHHHc-----------CC------------CCH
Confidence 457999999999999999999999987 99999986532110000000000 00 000
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
...... .. +...+. +++++.++ ++.+..+... +...+|+. +.+|.+|.|+|..
T Consensus 65 ~~~~~~---~~----~~~~~~-~i~~~~~~~v~~id~~~~~-----v~~~~g~~--~~~d~lvlAtG~~ 118 (415)
T 3lxd_A 65 ERICIR---PA----QFWEDK-AVEMKLGAEVVSLDPAAHT-----VKLGDGSA--IEYGKLIWATGGD 118 (415)
T ss_dssp GGGBSS---CH----HHHHHT-TEEEEETCCEEEEETTTTE-----EEETTSCE--EEEEEEEECCCEE
T ss_pred HHhccC---CH----HHHHHC-CcEEEeCCEEEEEECCCCE-----EEECCCCE--EEeeEEEEccCCc
Confidence 000000 11 222233 89999995 8888766543 23466765 4599999999964
No 138
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.38 E-value=3.1e-06 Score=87.58 Aligned_cols=34 Identities=35% Similarity=0.541 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.++||+|||||++|+++|..|++.|++|+|||++
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4589999999999999999999999999999997
No 139
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.36 E-value=2.4e-06 Score=88.32 Aligned_cols=103 Identities=16% Similarity=0.234 Sum_probs=76.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...+.
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~----------------------------------------- 207 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGAEVTLIEYMPEILPQ----------------------------------------- 207 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSTT-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCeEEEEEcCCccccc-----------------------------------------
Confidence 358999999999999999999999999999997532110
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCC--CcEEEEecCEEEEecCCCchhh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKD--GQELRAYAPLTIVCDGCFSNLR 202 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~--G~~~~v~ad~vI~ADG~~S~vR 202 (502)
....+.+.|.+.+++. |++++.++ ++++..+++.+ .|++.. + |+..++.+|+||.|.|..+...
T Consensus 208 --~~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~~~-~~~g~~~~i~~D~vv~a~G~~p~~~ 274 (464)
T 2eq6_A 208 --GDPETAALLRRALEKE-GIRVRTKTKAVGYEKKKDGL-HVRLEP-AEGGEGEEVVVDKVLVAVGRKPRTE 274 (464)
T ss_dssp --SCHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEE-EEEEEE-TTCCSCEEEEESEEEECSCEEESCT
T ss_pred --cCHHHHHHHHHHHHhc-CCEEEcCCEEEEEEEeCCEE-EEEEee-cCCCceeEEEcCEEEECCCcccCCC
Confidence 0123455666677776 89999997 99998776643 244331 4 6644577999999999877653
No 140
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.34 E-value=5.7e-07 Score=92.05 Aligned_cols=106 Identities=15% Similarity=0.165 Sum_probs=66.4
Q ss_pred CcEEEECCCHHHHHHHHHHhh--CCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGK--DGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~--~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.||+|||||++|+++|..|++ .|++|+|||+++...... .+..+.. +.. .
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~~--~~~~~~~-----------g~~-----~---------- 54 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--AFPHLAM-----------GWR-----K---------- 54 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--GHHHHHH-----------TCS-----C----------
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcCC--Ccchhcc-----------Ccc-----C----------
Confidence 589999999999999999999 899999999985321110 0000000 000 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+...+.+.+++. +++++.++++.+..++.. +..++|++ +.+|++|.|+|....
T Consensus 55 ----~~~~~~~~~~~~~~~-gv~~~~~~v~~id~~~~~-----v~~~~g~~--i~~d~liiAtG~~~~ 110 (430)
T 3h28_A 55 ----FEDISVPLAPLLPKF-NIEFINEKAESIDPDANT-----VTTQSGKK--IEYDYLVIATGPKLV 110 (430)
T ss_dssp ----GGGSEEESTTTGGGG-TEEEECSCEEEEETTTTE-----EEETTCCE--EECSEEEECCCCEEE
T ss_pred ----HHHHHHHHHHHHHhc-CCEEEEEEEEEEECCCCE-----EEECCCcE--EECCEEEEcCCcccc
Confidence 000000111122333 799998889888766553 23456764 559999999998754
No 141
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.33 E-value=3.7e-06 Score=84.61 Aligned_cols=100 Identities=19% Similarity=0.280 Sum_probs=77.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+.+|..|++.|.+|+|+|+.+....+
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~~~~----------------------------------------- 183 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGYQLDVVAPCEQVMPG----------------------------------------- 183 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCcchhhc-----------------------------------------
Confidence 468999999999999999999999999999997532110
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
.....+.+.|.+.+++. |++++.++ ++++..+++. +.+...+|++ +.+|.||.|.|..+..
T Consensus 184 -~~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~g~~--i~~d~vv~a~G~~p~~ 245 (384)
T 2v3a_A 184 -LLHPAAAKAVQAGLEGL-GVRFHLGPVLASLKKAGEG---LEAHLSDGEV--IPCDLVVSAVGLRPRT 245 (384)
T ss_dssp -TSCHHHHHHHHHHHHTT-TCEEEESCCEEEEEEETTE---EEEEETTSCE--EEESEEEECSCEEECC
T ss_pred -ccCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEecCCE---EEEEECCCCE--EECCEEEECcCCCcCH
Confidence 00123566777777776 89999997 9999877663 3455677864 5599999999988765
No 142
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.33 E-value=1.8e-06 Score=89.67 Aligned_cols=35 Identities=31% Similarity=0.432 Sum_probs=32.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
+.++||+||||||+|+++|+.|++.|.+|+||||.
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~~V~liEk~ 41 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGARVACLDFV 41 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCCEEEEEEec
Confidence 35689999999999999999999999999999964
No 143
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.33 E-value=1.3e-06 Score=90.80 Aligned_cols=35 Identities=23% Similarity=0.426 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.++||+|||||++|+++|..|++.|.+|+||||+.
T Consensus 10 ~~~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~~~ 44 (479)
T 2hqm_A 10 KHYDYLVIGGGSGGVASARRAASYGAKTLLVEAKA 44 (479)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTSCCEEEEESSC
T ss_pred ccCCEEEEcCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 35899999999999999999999999999999973
No 144
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.33 E-value=9.2e-07 Score=89.73 Aligned_cols=106 Identities=17% Similarity=0.144 Sum_probs=65.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.+|+|||||++|+++|..|++.|+ +|+|+|+.+..+-....+...... +.. . ...
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~~~~~~y~~~~l~~~~l~-----------~~~-----~-------~~~ 58 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALINDEKHLPYQRPPLSKAYLK-----------SGG-----D-------PNS 58 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECCSSSSSBCSGGGGTGGGG-----------SCC-----C-------TTS
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeCCCCCCCCCccCCHHHHC-----------CCC-----C-------HHH
Confidence 489999999999999999999999 899999986432110000000000 000 0 000
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
.... .... ..+. +++++..+++.+..+... +...+|+. +.+|.+|.|+|..
T Consensus 59 ~~~~---~~~~----~~~~-~i~~~~~~v~~id~~~~~-----v~~~~g~~--~~~d~lvlAtG~~ 109 (404)
T 3fg2_P 59 LMFR---PEKF----FQDQ-AIELISDRMVSIDREGRK-----LLLASGTA--IEYGHLVLATGAR 109 (404)
T ss_dssp SBSS---CHHH----HHHT-TEEEECCCEEEEETTTTE-----EEESSSCE--EECSEEEECCCEE
T ss_pred ccCC---CHHH----HHhC-CCEEEEEEEEEEECCCCE-----EEECCCCE--EECCEEEEeeCCC
Confidence 0000 1122 2233 799988559888766553 23466765 4599999999964
No 145
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=98.33 E-value=1.1e-06 Score=92.30 Aligned_cols=60 Identities=15% Similarity=0.321 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
.....+...++..++.++..++ +..+..+++++++|.+...++ ...+.|+-||.|-|+-.
T Consensus 211 ~~~~~~~~~~~~r~nl~v~~~~~v~~i~~~~~~a~gv~~~~~~~-~~~~~a~~VILsAGai~ 271 (526)
T 3t37_A 211 AADAWLTKAVRGRKNLTILTGSRVRRLKLEGNQVRSLEVVGRQG-SAEVFADQIVLCAGALE 271 (526)
T ss_dssp HHHHHSCHHHHTCTTEEEECSCEEEEEEEETTEEEEEEEEETTE-EEEEEEEEEEECSHHHH
T ss_pred cccccccccccCCCCeEEEeCCEEEEEEecCCeEEEEEEEecCc-eEEEeecceEEcccccC
Confidence 3444555566667799999988 999999999999999877655 45678999999999754
No 146
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.32 E-value=9.5e-07 Score=91.10 Aligned_cols=35 Identities=29% Similarity=0.470 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
+||+||||||+|+++|..|++.|++|+|+|+++..
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~~~~ 36 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKAL 36 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEESSSSS
T ss_pred CCEEEECCChhHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 79999999999999999999999999999998543
No 147
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.31 E-value=1.5e-06 Score=90.40 Aligned_cols=37 Identities=27% Similarity=0.442 Sum_probs=32.9
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 50 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
|.+.++||+|||||++|+++|+.|++.|++|+||||+
T Consensus 22 M~~~~~DVvVIGgG~aGl~aA~~la~~G~~V~liEk~ 58 (484)
T 3o0h_A 22 MGSFDFDLFVIGSGSGGVRAARLAGALGKRVAIAEEY 58 (484)
T ss_dssp --CCSEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCcCCCCEEEECcCHHHHHHHHHHHhCcCEEEEEeCC
Confidence 4445799999999999999999999999999999994
No 148
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.30 E-value=1.4e-06 Score=92.44 Aligned_cols=111 Identities=17% Similarity=0.199 Sum_probs=68.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.+|+|||||++|+++|..|++. |++|+|+|+.+..+-..+.....+ .+.. .....
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~~~~~~~~~~~l~~~~------------~~~~-----------~~~~~ 58 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFERGEYVSFANCGLPYHI------------SGEI-----------AQRSA 58 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECSSSCSSBCGGGHHHHH------------TSSS-----------CCGGG
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCCCccccccCchHHh------------cCCc-----------CChHH
Confidence 3899999999999999999998 899999999865331111110000 0000 00000
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
.... ....+.+. . +++++.++ |+++..+... +.+.+ .+|+..++.+|.||.|+|..
T Consensus 59 ~~~~---~~~~~~~~---~-~i~~~~~~~V~~id~~~~~---v~~~~~~~g~~~~~~~d~lviAtG~~ 116 (565)
T 3ntd_A 59 LVLQ---TPESFKAR---F-NVEVRVKHEVVAIDRAAKL---VTVRRLLDGSEYQESYDTLLLSPGAA 116 (565)
T ss_dssp GBCC---CHHHHHHH---H-CCEEETTEEEEEEETTTTE---EEEEETTTCCEEEEECSEEEECCCEE
T ss_pred hhcc---CHHHHHHh---c-CcEEEECCEEEEEECCCCE---EEEEecCCCCeEEEECCEEEECCCCC
Confidence 0000 11222222 2 78998877 8888776664 44444 45665567899999999984
No 149
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.30 E-value=1.7e-06 Score=89.37 Aligned_cols=34 Identities=21% Similarity=0.360 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.++||+|||||++|+++|+.|++.|++|+||||.
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~~G~~V~liEk~ 37 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAALGKKVAIAEEF 37 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred CCCcEEEECcCHHHHHHHHHHHhCCCEEEEEeCC
Confidence 4689999999999999999999999999999994
No 150
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.29 E-value=6.7e-06 Score=86.96 Aligned_cols=51 Identities=29% Similarity=0.455 Sum_probs=42.4
Q ss_pred cCCCeEEEece-EEEEEee--CCeEEEEEEEeCCCcEEEEec-CEEEEecCCCch
Q 010765 150 SLPNVRLEQGT-VTSLLEE--NGTIKGVQYKTKDGQELRAYA-PLTIVCDGCFSN 200 (502)
Q Consensus 150 ~~~~v~i~~~~-v~~~~~~--~~~v~~v~~~~~~G~~~~v~a-d~vI~ADG~~S~ 200 (502)
+.+|++++.++ |+.+..+ +++++||++...+|...+++| +-||.|.|+...
T Consensus 217 ~r~Nl~v~~~a~v~ri~~~~~~~~a~GV~~~~~~g~~~~v~A~keVILsaGa~~s 271 (577)
T 3q9t_A 217 NKPNITIVPEVHSKRLIINEADRTCKGVTVVTAAGNELNFFADREVILSQGVFET 271 (577)
T ss_dssp SCTTEEEECSEEEEEEEEETTTTEEEEEEEEETTSCEEEEEEEEEEEECSHHHHH
T ss_pred cCCCeEEEcCcEEEEEEEeCCCCEEEEEEEEeCCCcEEEEEeeeEEEEcccccCC
Confidence 45689999998 9999888 778999999887788888888 578999888644
No 151
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.29 E-value=4.8e-06 Score=85.82 Aligned_cols=99 Identities=20% Similarity=0.217 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||++|+.+|..|++.|.+|+|+|+.+...+.
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~~V~lv~~~~~~l~~----------------------------------------- 205 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPT----------------------------------------- 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEecCCccccc-----------------------------------------
Confidence 357999999999999999999999999999997532110
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.|.+.+++. |++++.++ |+++..+++. +.+..++|++ +.+|.||.|+|..+..
T Consensus 206 --~~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~~D~vv~A~G~~p~~ 266 (455)
T 2yqu_A 206 --MDLEVSRAAERVFKKQ-GLTIRTGVRVTAVVPEAKG---ARVELEGGEV--LEADRVLVAVGRRPYT 266 (455)
T ss_dssp --SCHHHHHHHHHHHHHH-TCEEECSCCEEEEEEETTE---EEEEETTSCE--EEESEEEECSCEEECC
T ss_pred --cCHHHHHHHHHHHHHC-CCEEEECCEEEEEEEeCCE---EEEEECCCeE--EEcCEEEECcCCCcCC
Confidence 0013455566666665 89999997 9999877664 4455566765 5599999999988765
No 152
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.27 E-value=1.2e-06 Score=90.17 Aligned_cols=35 Identities=29% Similarity=0.369 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~ 88 (502)
..||+|||||++|+++|..|++. |.+|+|+|+.+.
T Consensus 3 ~~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~~~ 39 (449)
T 3kd9_A 3 LKKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEATEW 39 (449)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSSC
T ss_pred cCcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECCCc
Confidence 46999999999999999999998 889999999864
No 153
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.26 E-value=3.7e-07 Score=95.46 Aligned_cols=40 Identities=28% Similarity=0.477 Sum_probs=35.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhh-CCCeEEEEecCCCCCCc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGK-DGRRVHVIERDVTEPDR 92 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~-~G~~v~lvEr~~~~~~r 92 (502)
.++||+|||||++||++|+.|++ .|++|+|+|++...+++
T Consensus 9 ~~~DVvIIGaGisGLsaA~~L~k~~G~~V~VlE~~~~~GG~ 49 (513)
T 4gde_A 9 ISVDVLVIGAGPTGLGAAKRLNQIDGPSWMIVDSNETPGGL 49 (513)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHCCSCEEEEESSSSCCGG
T ss_pred CCCCEEEECCcHHHHHHHHHHHhhCCCCEEEEECCCCCcCC
Confidence 46899999999999999999998 59999999999876653
No 154
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.24 E-value=8.7e-07 Score=90.11 Aligned_cols=105 Identities=21% Similarity=0.261 Sum_probs=65.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCe--EEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRR--VHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~--v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.+|+|||||++|+++|..|++.|++ |+|+|+.+..+-....+...+.. +.. + ...
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y~~~~l~~~~~~-----------g~~-----~-------~~~ 59 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPYDRPSLSKAVLD-----------GSL-----E-------RPP 59 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSBCSGGGGTHHHH-----------TSS-----S-------SCC
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCcCCccccHHHhC-----------CCC-----C-------HHH
Confidence 4899999999999999999999987 99999986533111000000000 000 0 000
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
. ... ... ..+. +++++.++ ++.+..+... +...+|++ +.+|.+|.|+|..
T Consensus 60 ~-~~~---~~~----~~~~-~i~~~~~~~v~~id~~~~~-----v~~~~g~~--~~~d~lvlAtG~~ 110 (410)
T 3ef6_A 60 I-LAE---ADW----YGEA-RIDMLTGPEVTALDVQTRT-----ISLDDGTT--LSADAIVIATGSR 110 (410)
T ss_dssp B-SSC---TTH----HHHT-TCEEEESCCEEEEETTTTE-----EEETTSCE--EECSEEEECCCEE
T ss_pred h-cCC---HHH----HHHC-CCEEEeCCEEEEEECCCCE-----EEECCCCE--EECCEEEEccCCc
Confidence 0 000 111 2233 89999995 9888766553 23467765 4599999999975
No 155
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.24 E-value=2.4e-06 Score=88.28 Aligned_cols=34 Identities=26% Similarity=0.390 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
++||+|||||++|+++|..|++.|.+|+|||++.
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~~V~lie~~~ 39 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCC
Confidence 5899999999999999999999999999999985
No 156
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.24 E-value=5e-06 Score=87.26 Aligned_cols=35 Identities=26% Similarity=0.387 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|||+||||||+|+++|..+++.|.+|+|||+..
T Consensus 41 ydYDviVIG~GpaG~~aA~~aa~~G~kValIE~~~ 75 (542)
T 4b1b_A 41 YDYDYVVIGGGPGGMASAKEAAAHGARVLLFDYVK 75 (542)
T ss_dssp SSEEEEEECCSHHHHHHHHHHHTTTCCEEEECCCC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCCeEEEEeccc
Confidence 36899999999999999999999999999999874
No 157
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.24 E-value=5.6e-07 Score=88.54 Aligned_cols=40 Identities=38% Similarity=0.483 Sum_probs=34.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhh--CCCeEEEEecCCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGK--DGRRVHVIERDVTEPD 91 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~--~G~~v~lvEr~~~~~~ 91 (502)
..++||+||||||+||++|+.|++ .|++|+|+||.+.+..
T Consensus 63 ~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG 104 (326)
T 3fpz_A 63 FAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGG 104 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCT
T ss_pred ccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCc
Confidence 346899999999999999999975 5999999999876544
No 158
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.22 E-value=2e-06 Score=86.06 Aligned_cols=35 Identities=34% Similarity=0.535 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
+..||+|||||++|+++|..|++.| +|+|+|+.+.
T Consensus 7 ~~~~vvIIGgG~AGl~aA~~l~~~g-~V~lie~~~~ 41 (367)
T 1xhc_A 7 HGSKVVIVGNGPGGFELAKQLSQTY-EVTVIDKEPV 41 (367)
T ss_dssp --CEEEEECCSHHHHHHHHHHTTTS-EEEEECSSSS
T ss_pred CCCcEEEECCcHHHHHHHHHHhhcC-CEEEEECCCC
Confidence 3469999999999999999999999 9999999864
No 159
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.22 E-value=5.8e-06 Score=86.01 Aligned_cols=32 Identities=28% Similarity=0.525 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-CCCeEEEEec
Q 010765 54 PTDVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~-~G~~v~lvEr 85 (502)
++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 35 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKKRVAVIDL 35 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCCEEEEEec
Confidence 5899999999999999999999 9999999993
No 160
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.21 E-value=1.6e-06 Score=90.37 Aligned_cols=112 Identities=17% Similarity=0.225 Sum_probs=71.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
..+||+|||||++|+++|..|++. ++|+|+|+++....... ... ... .+ ++ +
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~~-~~V~vie~~~~~GG~~~---~~~-------~~~--~g------~~---------~ 158 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQY-LTVALIEERGWLGGDMW---LKG-------IKQ--EG------FN---------K 158 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTTT-CCEEEECTTSSSSCSGG---GTC-------SEE--TT------TT---------E
T ss_pred ccCCEEEECccHHHHHHHHHHHhc-CCEEEEeCCCCCCCeee---ccc-------ccc--CC------CC---------C
Confidence 346999999999999999999999 99999999865432211 000 000 00 00 0
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
....+...+.+.+ + .+++++.++ +.++..++..+. +. ...+++..++.+|.+|.|+|...
T Consensus 159 ---~~~~~~~~l~~~l-~-~~v~~~~~~~v~~i~~~~~~~~-~~-~~~~~~~~~~~~d~lvlAtGa~~ 219 (493)
T 1y56_A 159 ---DSRKVVEELVGKL-N-ENTKIYLETSALGVFDKGEYFL-VP-VVRGDKLIEILAKRVVLATGAID 219 (493)
T ss_dssp ---EHHHHHHHHHHTC-C-TTEEEETTEEECCCEECSSSEE-EE-EEETTEEEEEEESCEEECCCEEE
T ss_pred ---CHHHHHHHHHHHH-h-cCCEEEcCCEEEEEEcCCcEEE-EE-EecCCeEEEEECCEEEECCCCCc
Confidence 1223444444444 3 489998887 888776655432 11 12445545678999999999754
No 161
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.20 E-value=1.1e-06 Score=91.28 Aligned_cols=35 Identities=29% Similarity=0.453 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
+.++||+||||||+|+++|+.|++.|++|+||||+
T Consensus 18 ~~~~dVvIIGgG~aGl~aA~~la~~G~~V~liE~~ 52 (478)
T 3dk9_A 18 VASYDYLVIGGGSGGLASARRAAELGARAAVVESH 52 (478)
T ss_dssp EEECSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEecC
Confidence 34689999999999999999999999999999976
No 162
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.19 E-value=7.9e-06 Score=84.39 Aligned_cols=100 Identities=22% Similarity=0.206 Sum_probs=74.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~~Vtlv~~~~~~l~-------~~~-------------------------------- 206 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGSEVTVVALEDRLLF-------QFD-------------------------------- 206 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TSC--------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCcccc-------ccC--------------------------------
Confidence 35799999999999999999999999999998743110 000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+.|.+.+++. |++++.++ ++++..++++ +.+..++|+. ++.+|.||.|.|..+..
T Consensus 207 ----~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~---~~v~~~~G~~-~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 207 ----PLLSATLAENMHAQ-GIETHLEFAVAALERDAQG---TTLVAQDGTR-LEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ----HHHHHHHHHHHHHT-TCEEESSCCEEEEEEETTE---EEEEETTCCE-EEEESEEEECSCEEESC
T ss_pred ----HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCe---EEEEEeCCcE-EEEcCEEEECCCCCcCC
Confidence 12344556666666 89999998 9999877664 4455677873 45699999999987654
No 163
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.19 E-value=2.3e-06 Score=87.57 Aligned_cols=104 Identities=17% Similarity=0.206 Sum_probs=65.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
+|+|||||++|+++|..|++.+ ++|+|||+++...-.. .+-.+.. |.. ..++ .
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~~~~~~~~p--~l~~v~~-----------g~~-----~~~~-------i 58 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFTP--AFPHLAM-----------GWR-----KFED-------I 58 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECGG--GHHHHHH-----------TCS-----CGGG-------S
T ss_pred cEEEECCCHHHHHHHHHHhccCcCCeEEEEcCCCCCccCc--cHHHHhc-----------CCC-----CHHH-------h
Confidence 6999999999999999999865 8999999975311000 0000000 000 0000 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
..+ +++.+++. |++++.++|++++.++..| ..++|++ +.+|++|.|.|...
T Consensus 59 ~~~-------~~~~~~~~-gv~~i~~~v~~Id~~~~~V-----~~~~g~~--i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 59 SVP-------LAPLLPKF-NIEFINEKAESIDPDANTV-----TTQSGKK--IEYDYLVIATGPKL 109 (430)
T ss_dssp EEE-------STTTGGGG-TEEEECSCEEEEETTTTEE-----EETTCCE--EECSEEEECCCCEE
T ss_pred hhc-------HHHHHHHC-CcEEEEeEEEEEECCCCEE-----EECCCCE--EECCEEEEeCCCCc
Confidence 011 01112233 8999999999998776643 3577875 45999999999753
No 164
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.18 E-value=4.2e-06 Score=84.98 Aligned_cols=106 Identities=18% Similarity=0.207 Sum_probs=66.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
.++||+|||||++|+++|..|++.|. +|+|+|+.+..+-......+.+.. +. . . .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~~~~~~~~~-----------~~---~--~-~------ 62 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERPYDRPPLSKDFMA-----------HG---D--A-E------ 62 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCCBCSGGGGTHHHH-----------HC---C--G-G------
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCcccCCCCCHHHhC-----------CC---c--h-h------
Confidence 45799999999999999999999998 499999985432110000000000 00 0 0 0
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+. .+.+. +++++.++ ++.+..+... |. ..+|++ +.+|.+|.|+|....
T Consensus 63 -~~~~~----------~~~~~-~v~~~~~~~v~~i~~~~~~---v~--~~~g~~--~~~d~lviAtG~~~~ 114 (408)
T 2gqw_A 63 -KIRLD----------CKRAP-EVEWLLGVTAQSFDPQAHT---VA--LSDGRT--LPYGTLVLATGAAPR 114 (408)
T ss_dssp -GSBCC----------CTTSC-SCEEEETCCEEEEETTTTE---EE--ETTSCE--EECSEEEECCCEEEC
T ss_pred -hhhHH----------HHHHC-CCEEEcCCEEEEEECCCCE---EE--ECCCCE--EECCEEEECCCCCCC
Confidence 00000 22333 79999997 8888765543 32 356764 569999999998543
No 165
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=98.17 E-value=7.6e-06 Score=86.54 Aligned_cols=52 Identities=23% Similarity=0.371 Sum_probs=42.4
Q ss_pred HHcCCCeEEEece-EEEEEee----CCeEEEEEEEeCCCcEEEEecC-EEEEecCCCc
Q 010765 148 AASLPNVRLEQGT-VTSLLEE----NGTIKGVQYKTKDGQELRAYAP-LTIVCDGCFS 199 (502)
Q Consensus 148 a~~~~~v~i~~~~-v~~~~~~----~~~v~~v~~~~~~G~~~~v~ad-~vI~ADG~~S 199 (502)
+.+.+|++|..++ |+.+..+ +++++||++...+|+..+++|+ -||.|.|+..
T Consensus 236 ~~~r~NL~V~t~a~V~rIl~d~~~~~~ra~GV~~~~~~G~~~~v~A~kEVILsAGa~~ 293 (583)
T 3qvp_A 236 NYQRPNLQVLTGQYVGKVLLSQNGTTPRAVGVEFGTHKGNTHNVYAKHEVLLAAGSAV 293 (583)
T ss_dssp TTTCTTEEEECSCEEEEEEEECSSSSCEEEEEEEESSTTCEEEEEEEEEEEECSCTTT
T ss_pred hhcCCCcEEEcCCEEEEEEeccCCCCCEEEEEEEEecCCcEEEEEECCEEEEeCCccC
Confidence 3445799999998 9999887 6789999998678888888896 6888888774
No 166
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.17 E-value=1.2e-05 Score=82.64 Aligned_cols=100 Identities=24% Similarity=0.360 Sum_probs=73.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
...+|+|||||++|+.+|..|++.|.+|+|+|+.+....+.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILDRPLGVY--------------------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT---------------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCeEEEEecCccccccc---------------------------------------
Confidence 45799999999999999999999999999999985321100
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.+++. |++++.++ ++++..+ +++..+. . +|++ +.+|.||.|.|.....
T Consensus 189 ---~~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~-~~v~~v~--~-~~~~--i~~d~vi~a~G~~p~~ 248 (447)
T 1nhp_A 189 ---LDKEFTDVLTEEMEAN-NITIATGETVERYEGD-GRVQKVV--T-DKNA--YDADLVVVAVGVRPNT 248 (447)
T ss_dssp ---CCHHHHHHHHHHHHTT-TEEEEESCCEEEEECS-SBCCEEE--E-SSCE--EECSEEEECSCEEESC
T ss_pred ---CCHHHHHHHHHHHHhC-CCEEEcCCEEEEEEcc-CcEEEEE--E-CCCE--EECCEEEECcCCCCCh
Confidence 0023566777777777 89999987 8888765 4432333 3 3443 5699999999987653
No 167
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.15 E-value=5.3e-06 Score=86.48 Aligned_cols=36 Identities=17% Similarity=0.352 Sum_probs=32.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+.+.+|||||||++|+++|..|++.+++|+|||+++
T Consensus 40 ~~KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~~~ 75 (502)
T 4g6h_A 40 SDKPNVLILGSGWGAISFLKHIDTKKYNVSIISPRS 75 (502)
T ss_dssp CSSCEEEEECSSHHHHHHHHHSCTTTCEEEEEESSS
T ss_pred CCCCCEEEECCcHHHHHHHHHhhhCCCcEEEECCCC
Confidence 345689999999999999999999999999999974
No 168
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.15 E-value=2.5e-05 Score=75.95 Aligned_cols=101 Identities=19% Similarity=0.219 Sum_probs=76.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 182 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIASEVHLIHRRDGFRA------------------------------------------ 182 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCC------------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCcccc------------------------------------------
Confidence 35799999999999999999999999999998742100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-C-CcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-D-GQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~-G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.|.+.+++. |++++.++ ++++..+++++.+|.+.+. + |+..++.+|.||.|.|....
T Consensus 183 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p~ 248 (320)
T 1trb_A 183 ---EKILIKRLMDKVENG-NIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSPN 248 (320)
T ss_dssp ---CHHHHHHHHHHHHTS-SEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEES
T ss_pred ---CHHHHHHHHHhcccC-CeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCCC
Confidence 012455666667776 89999987 9999877667767777652 2 55456789999999996543
No 169
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.15 E-value=1.6e-06 Score=89.38 Aligned_cols=41 Identities=27% Similarity=0.457 Sum_probs=37.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRI 93 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~ 93 (502)
.++||+|||||++||++|..|+++|++|+|+|++...+++.
T Consensus 10 ~~~dvvVIGaG~~GL~aA~~La~~G~~V~vlE~~~~~GG~~ 50 (453)
T 2bcg_G 10 TDYDVIVLGTGITECILSGLLSVDGKKVLHIDKQDHYGGEA 50 (453)
T ss_dssp CBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCGGG
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCCeEEEEeCCCCCCccc
Confidence 45899999999999999999999999999999998776543
No 170
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.13 E-value=7.1e-06 Score=84.39 Aligned_cols=100 Identities=18% Similarity=0.218 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~~-------------------------------- 207 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDAPLP-------SFD-------------------------------- 207 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TSC--------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCEEEEEEeCCchhh-------hhh--------------------------------
Confidence 45899999999999999999999999999999743110 000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+.|.+.+++. |++++.++ ++++..++++. +.+..++|++ +.+|.||.|.|..+..
T Consensus 208 ----~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~--i~~D~vv~a~G~~p~~ 267 (450)
T 1ges_A 208 ----PMISETLVEVMNAE-GPQLHTNAIPKAVVKNTDGS--LTLELEDGRS--ETVDCLIWAIGREPAN 267 (450)
T ss_dssp ----HHHHHHHHHHHHHH-SCEEECSCCEEEEEECTTSC--EEEEETTSCE--EEESEEEECSCEEESC
T ss_pred ----HHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCcE--EEEEECCCcE--EEcCEEEECCCCCcCC
Confidence 12445556666665 89999997 99998765432 3344567864 5699999999987665
No 171
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.12 E-value=9.3e-06 Score=83.17 Aligned_cols=111 Identities=14% Similarity=0.178 Sum_probs=66.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
+|+|||||++|+++|..|++.| .+|+|+|+++...-..+ ++.... .+.. .......
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~~~~~-~l~~~~-----------~~~~----------~~~~~~~ 59 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMSFANC-ALPYVI-----------GEVV----------EDRRYAL 59 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSSBCGG-GHHHHH-----------TTSS----------CCGGGTB
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCCCCcc-hhHHHH-----------cCCc----------cchhhhh
Confidence 6999999999999999999988 57999999854321111 111000 0000 0000000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
.... + .+.+. . +++++.++ |+.+..+... +.+.. .+++..++.+|.+|.|.|.+.
T Consensus 60 ~~~~---~-~~~~~---~-~i~~~~~~~V~~id~~~~~---~~~~~~~~~~~~~~~yd~lVIATGs~p 116 (437)
T 4eqs_A 60 AYTP---E-KFYDR---K-QITVKTYHEVIAINDERQT---VSVLNRKTNEQFEESYDKLILSPGASA 116 (437)
T ss_dssp CCCH---H-HHHHH---H-CCEEEETEEEEEEETTTTE---EEEEETTTTEEEEEECSEEEECCCEEE
T ss_pred hcCH---H-HHHHh---c-CCEEEeCCeEEEEEccCcE---EEEEeccCCceEEEEcCEEEECCCCcc
Confidence 0111 1 12222 2 78998887 8888766554 33333 445566678999999999754
No 172
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.11 E-value=1e-05 Score=90.95 Aligned_cols=114 Identities=24% Similarity=0.340 Sum_probs=71.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.+||+||||||+|+++|..|++.|++|+|||+.+...++.. .. . .. ...+
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~~V~lie~~~~~GG~~~----~~-~----k~--~i~~------------------- 177 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGARVMLLDERAEAGGTLL----DT-A----GE--QIDG------------------- 177 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSSGGGG----GS-S----CC--EETT-------------------
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCCCCCceec----cC-C----cc--ccCC-------------------
Confidence 57999999999999999999999999999999865432221 10 0 00 0000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-------C----CCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-------K----DGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-------~----~G~~~~v~ad~vI~ADG~~S 199 (502)
.....+...+.+.+.+.++++++.++ |.++.. ++.+..+.... . ++...++++|.||.|+|...
T Consensus 178 -~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~-~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~p 253 (965)
T 2gag_A 178 -MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYD-ANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAHE 253 (965)
T ss_dssp -EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEET-TTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEEE
T ss_pred -CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeec-CCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCcc
Confidence 00123344555566665689999987 777753 23332222100 0 12223578999999999853
No 173
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=98.11 E-value=2.8e-05 Score=75.30 Aligned_cols=96 Identities=22% Similarity=0.254 Sum_probs=73.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||+|++|+-+|..|++.|.+|+++++.+... .
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~-----------~-------------------------------- 181 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------A-------------------------------- 181 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTBSEEEEECSSSSCC-----------S--------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHhCCEEEEEEeCcccC-----------c--------------------------------
Confidence 479999999999999999999999999999874310 0
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+.+.+.+.+..+++++.++ ++++..+++++.+|++.+ .+|++.++.+|.||.|.|...
T Consensus 182 ------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 182 ------DQVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp ------CHHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ------cHHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 01233445554589999997 899987666776777766 457766788999999998643
No 174
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.11 E-value=2.3e-05 Score=77.76 Aligned_cols=101 Identities=24% Similarity=0.300 Sum_probs=76.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+.....
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~~----------------------------------------- 201 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAASVTLVHRGHEFQGH----------------------------------------- 201 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCSSC-----------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCCCCCC-----------------------------------------
Confidence 357999999999999999999999999999987431100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+.+.|.+..++. +++++.++ ++++..+++++.+|.+...+|+..++.+|.||.|.|....
T Consensus 202 ----~~~~~~l~~~~~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p~ 264 (360)
T 3ab1_A 202 ----GKTAHEVERARANG-TIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKSN 264 (360)
T ss_dssp ----SHHHHSSHHHHHHT-SEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCCS
T ss_pred ----HHHHHHHHHHhhcC-ceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCCC
Confidence 01223344444554 89999997 9999888787767777656786666789999999996543
No 175
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.09 E-value=1.7e-05 Score=81.61 Aligned_cols=102 Identities=17% Similarity=0.295 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...+ ..
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 209 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGEILS-------GF--------------------------------- 209 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------cc---------------------------------
Confidence 46899999999999999999999999999999753210 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++..+++.+ .+++.. +|+..++.+|.||.|.|.....
T Consensus 210 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~-~g~~~~~~~D~vv~a~G~~p~~ 272 (455)
T 1ebd_A 210 ---EKQMAAIIKKRLKKK-GVEVVTNALAKGAEEREDGV-TVTYEA-NGETKTIDADYVLVTVGRRPNT 272 (455)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEEESEEEEEEEEETTEE-EEEEEE-TTEEEEEEESEEEECSCEEESC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCeE-EEEEEe-CCceeEEEcCEEEECcCCCccc
Confidence 012455666667776 89999987 99998776643 244332 3443457799999999987543
No 176
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.09 E-value=2.6e-05 Score=80.75 Aligned_cols=104 Identities=16% Similarity=0.268 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...+. +
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~--------------------------------- 222 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQPQIGAS-------M--------------------------------- 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSSS-------S---------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCccccc-------c---------------------------------
Confidence 458999999999999999999999999999998532110 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~-~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ ++++..+ ++....|.+.+ .+|+..++.+|.||.|.|.....
T Consensus 223 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 289 (478)
T 1v59_A 223 ---DGEVAKATQKFLKKQ-GLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPYI 289 (478)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEECC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcCC
Confidence 023555666777776 89999997 8888762 33333454442 23444457799999999987654
No 177
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.07 E-value=3.2e-05 Score=78.30 Aligned_cols=101 Identities=24% Similarity=0.391 Sum_probs=77.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 142 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~~~~~---------------------------------------- 181 (404)
T 3fg2_P 142 KKHVVVIGAGFIGLEFAATARAKGLEVDVVELAPRVMARV---------------------------------------- 181 (404)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCcchhhc----------------------------------------
Confidence 3579999999999999999999999999999985321100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.+++. |++++.++ ++++..+++++.+|. .++|++ +.||.||.|.|.....
T Consensus 182 --~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~V~--~~dG~~--i~aD~Vv~a~G~~p~~ 243 (404)
T 3fg2_P 182 --VTPEISSYFHDRHSGA-GIRMHYGVRATEIAAEGDRVTGVV--LSDGNT--LPCDLVVVGVGVIPNV 243 (404)
T ss_dssp --SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEEETTEEEEEE--ETTSCE--EECSEEEECCCEEECC
T ss_pred --cCHHHHHHHHHHHHhC-CcEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEECcCCccCH
Confidence 0123556666777776 89999997 999988877765554 577875 4599999999986543
No 178
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=98.07 E-value=2.1e-06 Score=87.57 Aligned_cols=36 Identities=31% Similarity=0.490 Sum_probs=33.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
+||+|||||++|+++|+.|++.|.+|+|+|++....
T Consensus 2 ~dVvVIGaG~aGl~aA~~L~~~G~~V~vlE~~~~~G 37 (431)
T 3k7m_X 2 YDAIVVGGGFSGLKAARDLTNAGKKVLLLEGGERLG 37 (431)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSB
T ss_pred CCEEEECCcHHHHHHHHHHHHcCCeEEEEecCCCcc
Confidence 699999999999999999999999999999975543
No 179
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.07 E-value=3.4e-06 Score=85.89 Aligned_cols=39 Identities=28% Similarity=0.408 Sum_probs=35.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~~~~~ 91 (502)
.+.||+|||||++||++|+.|+++| ++|+|+|++....+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~~g~~~v~v~E~~~~~GG 44 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQAGFHDYTILERTDHVGG 44 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSSCSST
T ss_pred CCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEECCCCCCC
Confidence 4579999999999999999999999 99999999876544
No 180
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.05 E-value=3.7e-05 Score=78.06 Aligned_cols=101 Identities=21% Similarity=0.308 Sum_probs=77.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtvv~~~~~~l~~~---------------------------------------- 191 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTKFGVNVTLLEALPRVLARV---------------------------------------- 191 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCCeEEEEecCCchhhhh----------------------------------------
Confidence 4589999999999999999999999999999985421100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.+++. |++++.++ ++++..+++++.+|+ .++|++ +.||.||.|.|.....
T Consensus 192 --~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~~v~--l~dG~~--i~aD~Vv~a~G~~p~~ 253 (415)
T 3lxd_A 192 --AGEALSEFYQAEHRAH-GVDLRTGAAMDCIEGDGTKVTGVR--MQDGSV--IPADIVIVGIGIVPCV 253 (415)
T ss_dssp --SCHHHHHHHHHHHHHT-TCEEEETCCEEEEEESSSBEEEEE--ESSSCE--EECSEEEECSCCEESC
T ss_pred --cCHHHHHHHHHHHHhC-CCEEEECCEEEEEEecCCcEEEEE--eCCCCE--EEcCEEEECCCCccCh
Confidence 0123556666777776 89999987 999988777665554 567775 4599999999987654
No 181
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.05 E-value=4.1e-06 Score=84.25 Aligned_cols=34 Identities=29% Similarity=0.424 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--CeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~ 87 (502)
++||+|||||++|+++|..|++.| .+|+|+|++.
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 589999999999999999999999 5699999875
No 182
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=98.05 E-value=3.5e-06 Score=84.14 Aligned_cols=41 Identities=34% Similarity=0.635 Sum_probs=36.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC-CCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD-VTEPDR 92 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~-~~~~~r 92 (502)
....||+|||||++||++|+.|+++|++|+|+|++ ....++
T Consensus 42 ~~~~~V~IIGAGiaGL~aA~~L~~~G~~V~VlE~~~~~vGGr 83 (376)
T 2e1m_A 42 GPPKRILIVGAGIAGLVAGDLLTRAGHDVTILEANANRVGGR 83 (376)
T ss_dssp CSCCEEEEECCBHHHHHHHHHHHHTSCEEEEECSCSSCCBTT
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCCcEEEEeccccccCCc
Confidence 45689999999999999999999999999999998 655443
No 183
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.05 E-value=4e-05 Score=75.00 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~~g~~v~~v~~~~~~~~------------------------------------------ 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTKYGSKVFMLVRKDHLRA------------------------------------------ 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEEcCCccCC------------------------------------------
Confidence 45799999999999999999999999999998743110
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
...+.+.+.+..|++++.++ +.++..+++++.+|++.+ .+|+..++.+|.||.|.|..
T Consensus 211 -------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 270 (338)
T 3itj_A 211 -------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHT 270 (338)
T ss_dssp -------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEE
T ss_pred -------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCC
Confidence 01223334333489999997 999988777777787776 45655678899999999964
No 184
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.05 E-value=1.5e-05 Score=85.07 Aligned_cols=35 Identities=26% Similarity=0.417 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
...+||+||||||+|+++|..|++.|++|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCCeEEEEecc
Confidence 45689999999999999999999999999999984
No 185
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.05 E-value=1.9e-06 Score=90.43 Aligned_cols=41 Identities=37% Similarity=0.548 Sum_probs=36.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEecCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTEPDRI 93 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~~~~~r~ 93 (502)
.+.||+|||||++||++|..|+++| ++|+|+|++...++|+
T Consensus 7 ~~~~VvIIGaG~aGL~AA~~L~~~G~~~V~VlEa~~riGGr~ 48 (516)
T 1rsg_A 7 AKKKVIIIGAGIAGLKAASTLHQNGIQDCLVLEARDRVGGRL 48 (516)
T ss_dssp EEEEEEEECCBHHHHHHHHHHHHTTCCSEEEECSSSSSBTTC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhcCCCCEEEEeCCCCCCCce
Confidence 4579999999999999999999999 9999999997766543
No 186
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=98.05 E-value=7.4e-05 Score=72.34 Aligned_cols=97 Identities=14% Similarity=0.117 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 180 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICKKVYLIHRRDGFRC------------------------------------------ 180 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeeCCccCC------------------------------------------
Confidence 46899999999999999999999999999998742100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
...+.+.+.+..+++++.++ ++++..+++++.+|.+.. .+|++.++.+|.||.|.|...
T Consensus 181 -------~~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 181 -------APITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp -------CHHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred -------CHHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 01123334433489999997 899887767666677654 367766678999999999643
No 187
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.05 E-value=1.1e-05 Score=81.45 Aligned_cols=104 Identities=18% Similarity=0.205 Sum_probs=64.6
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
+|+|||||++|+++|..|++.| .+|+|||+++...... .+..+.. +.. + ....
T Consensus 4 kVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~~~~~p--~~~~v~~-----------g~~-----~-------~~~~ 58 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNETYYTCY--MSNEVIG-----------GDR-----E-------LASL 58 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSSEECST--THHHHHH-----------TSS-----C-------GGGG
T ss_pred EEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCCCCCcc--CHHHHhc-----------CCC-----C-------HHHH
Confidence 7999999999999999998876 6899999875311000 0000000 000 0 0000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
... +.. +... +++++.++|++++.+...+ ...+|.+ +.+|++|.|.|....
T Consensus 59 ~~~---~~~-----~~~~-gv~~i~~~v~~id~~~~~v-----~~~~g~~--i~yd~LviAtG~~~~ 109 (401)
T 3vrd_B 59 RVG---YDG-----LRAH-GIQVVHDSALGIDPDKKLV-----KTAGGAE--FAYDRCVVAPGIDLL 109 (401)
T ss_dssp EEC---SHH-----HHHT-TCEEECSCEEEEETTTTEE-----EETTSCE--EECSEEEECCCEEEC
T ss_pred hhC---HHH-----HHHC-CCEEEEeEEEEEEccCcEE-----Eecccce--eecceeeeccCCccc
Confidence 011 111 1223 8999999999998766542 3567775 459999999997654
No 188
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.04 E-value=2.1e-06 Score=88.36 Aligned_cols=40 Identities=45% Similarity=0.479 Sum_probs=35.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
.++||+|||||++||++|+.|++.|++|+|+|++....++
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 43 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGLSVAVIEARDRVGGR 43 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCTT
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCcEEEEECCCCCCCc
Confidence 3579999999999999999999999999999998765544
No 189
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=98.03 E-value=4.3e-06 Score=86.93 Aligned_cols=41 Identities=32% Similarity=0.485 Sum_probs=36.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
+.+.||+|||||++||++|+.|+++|++|+|+|++....++
T Consensus 9 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~v~v~E~~~~~GG~ 49 (489)
T 2jae_A 9 KGSHSVVVLGGGPAGLCSAFELQKAGYKVTVLEARTRPGGR 49 (489)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCCCEEEEeccCCCCCc
Confidence 34679999999999999999999999999999998765443
No 190
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.03 E-value=2.9e-05 Score=80.23 Aligned_cols=103 Identities=16% Similarity=0.249 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+...+ .+
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 213 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGAEVTVVEFAPRCAP-------TL--------------------------------- 213 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHhCCEEEEEecCCcccc-------cC---------------------------------
Confidence 45899999999999999999999999999999853211 00
Q ss_pred eecchHHHHHHHHHH-HcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKA-ASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a-~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+ ++. |++++.++ ++++..+++.+ .+.+...+|+..++.+|.||.|.|..+..
T Consensus 214 ---d~~~~~~l~~~l~~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~g~~~~i~~D~vv~a~G~~p~~ 278 (468)
T 2qae_A 214 ---DEDVTNALVGALAKNE-KMKFMTSTKVVGGTNNGDSV-SLEVEGKNGKRETVTCEALLVSVGRRPFT 278 (468)
T ss_dssp ---CHHHHHHHHHHHHHHT-CCEEECSCEEEEEEECSSSE-EEEEECC---EEEEEESEEEECSCEEECC
T ss_pred ---CHHHHHHHHHHHhhcC-CcEEEeCCEEEEEEEcCCeE-EEEEEcCCCceEEEECCEEEECCCcccCC
Confidence 012455666666 666 89999987 89988765543 34443335654567899999999987654
No 191
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.01 E-value=2.9e-05 Score=81.47 Aligned_cols=102 Identities=17% Similarity=0.242 Sum_probs=77.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~-------~~---------------------------------- 253 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEPLKL-------IK---------------------------------- 253 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTTT-------CC----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHHcCCeEEEEEecCcccc-------cc----------------------------------
Confidence 6899999999999999999999999999999853110 00
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~-~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ |+++..++ +.+.++.+..++|+ .++.+|.||.|.|..+..
T Consensus 254 --~~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~-~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 254 --DNETRAYVLDRMKEQ-GMEIISGSNVTRIEEDANGRVQAVVAMTPNGE-MRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp --SHHHHHHHHHHHHHT-TCEEESSCEEEEEEECTTSBEEEEEEEETTEE-EEEECSCEEECCCCEECC
T ss_pred --cHHHHHHHHHHHHhC-CcEEEECCEEEEEEEcCCCceEEEEEEECCCc-EEEEcCEEEECcCCccCC
Confidence 012455667777776 89999997 99988654 33444556667775 246799999999998765
No 192
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.00 E-value=4.6e-06 Score=83.97 Aligned_cols=39 Identities=38% Similarity=0.593 Sum_probs=35.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
...+||+|||||++||++|+.|+++|.+|+|+|+++...
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~~v~v~E~~~~~G 65 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQRVLIVDRRPHIG 65 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCCceEEEeccCCCC
Confidence 457899999999999999999999999999999986543
No 193
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.99 E-value=2.5e-05 Score=82.96 Aligned_cols=53 Identities=17% Similarity=0.270 Sum_probs=42.4
Q ss_pred HHcCCCeEEEece-EEEEEeeC----CeEEEEEEEeCCCcEEEEec-CEEEEecCCCch
Q 010765 148 AASLPNVRLEQGT-VTSLLEEN----GTIKGVQYKTKDGQELRAYA-PLTIVCDGCFSN 200 (502)
Q Consensus 148 a~~~~~v~i~~~~-v~~~~~~~----~~v~~v~~~~~~G~~~~v~a-d~vI~ADG~~S~ 200 (502)
+.+.+|++++.++ |+++..++ ++++||++.+.+|+..+++| +-||.|.|....
T Consensus 240 ~~~~~nl~i~~~~~v~~l~~~~~~~~~~~~GV~~~~~~g~~~~v~A~k~VILaaG~~~s 298 (587)
T 1gpe_A 240 NYQRSNLEILTGQMVGKVLFKQTASGPQAVGVNFGTNKAVNFDVFAKHEVLLAAGSAIS 298 (587)
T ss_dssp TTTCTTEEEEESCEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEEEEEEECSCTTTH
T ss_pred hhcCCCcEEEcCCEEEEEEECCCCCCCEEEEEEEEeCCCcEEEEEecccEEEccCCCCC
Confidence 3445699999998 99988653 47889998767788888889 899999998654
No 194
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=97.98 E-value=4.4e-06 Score=87.60 Aligned_cols=39 Identities=36% Similarity=0.514 Sum_probs=35.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
++||+|||||++||++|..|+++|++|+|+|++....++
T Consensus 4 ~~~vvIIGaG~aGL~aA~~L~~~G~~V~vlE~~~~~GGr 42 (520)
T 1s3e_A 4 KCDVVVVGGGISGMAAAKLLHDSGLNVVVLEARDRVGGR 42 (520)
T ss_dssp BCSEEEECCBHHHHHHHHHHHHTTCCEEEECSSSSSBTT
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999999999998765443
No 195
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.97 E-value=5.2e-06 Score=84.00 Aligned_cols=39 Identities=28% Similarity=0.477 Sum_probs=34.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC-CCeEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~-G~~v~lvEr~~~~~~ 91 (502)
.++||+|||||++||++|..|+++ |++|+|+|+++...+
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~~~g~~v~v~E~~~~~GG 45 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVATQLDKRVLVLERRPHIGG 45 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHHHSCCCEEEECSSSSSSG
T ss_pred ccCCEEEECCCHHHHHHHHHHHHhCCCCEEEEeCCCCCCC
Confidence 368999999999999999999999 999999999865443
No 196
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.96 E-value=3.7e-05 Score=80.17 Aligned_cols=101 Identities=15% Similarity=0.184 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .+
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 215 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGIDSYIFARGNRILR-------KF--------------------------------- 215 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSSSCT-------TS---------------------------------
T ss_pred CCeEEEECChHHHHHHHHHHHHcCCeEEEEecCCccCc-------cc---------------------------------
Confidence 45899999999999999999999999999999753110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+...+.+.+++. |++++.++ ++++..++++. +.+..++|++ ++.+|.||.|.|.....
T Consensus 216 ---d~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~--~~v~~~~g~~-~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 216 ---DESVINVLENDMKKN-NINIVTFADVVEIKKVSDKN--LSIHLSDGRI-YEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSTTC--EEEEETTSCE-EEEESEEEECCCBCCTT
T ss_pred ---chhhHHHHHHHHHhC-CCEEEECCEEEEEEEcCCce--EEEEECCCcE-EEECCEEEECCCCCcCC
Confidence 012445566666666 89999998 99988754331 3344567875 36699999999987665
No 197
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.96 E-value=8.7e-05 Score=71.76 Aligned_cols=96 Identities=18% Similarity=0.183 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|+.|+-+|..|++.|.+|+++++.+.... .
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~~v~~~~~~~~~~~----------------------~------------------- 185 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICSKIYLIHRRDEFRA----------------------A------------------- 185 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSSEEEEECSSSSCBS----------------------C-------------------
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCCEEEEEEeCCCCCC----------------------C-------------------
Confidence 35799999999999999999999999999998743100 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
...+.+.+++. |++++.++ +.++..+++++.+|++...+|+..++.+|.||.|.|..
T Consensus 186 -------~~~~~~~~~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~ 243 (315)
T 3r9u_A 186 -------PSTVEKVKKNE-KIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLN 243 (315)
T ss_dssp -------HHHHHHHHHCT-TEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEE
T ss_pred -------HHHHHHHHhcC-CeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCC
Confidence 01112222344 89999887 99998888787778877668887778899999999964
No 198
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.96 E-value=6.2e-05 Score=78.24 Aligned_cols=103 Identities=20% Similarity=0.354 Sum_probs=76.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .+
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 237 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGAKVTVVEFLDTILG-------GM--------------------------------- 237 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSSS-------SS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEeccccccc-------cC---------------------------------
Confidence 45799999999999999999999999999998753110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++..+++.+ .+.+.+. +|+..++.+|.||.|.|.....
T Consensus 238 ---d~~~~~~l~~~l~~~-gV~v~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~~ 302 (491)
T 3urh_A 238 ---DGEVAKQLQRMLTKQ-GIDFKLGAKVTGAVKSGDGA-KVTFEPVKGGEATTLDAEVVLIATGRKPST 302 (491)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEECSEEEEEEEEETTEE-EEEEEETTSCCCEEEEESEEEECCCCEECC
T ss_pred ---CHHHHHHHHHHHHhC-CCEEEECCeEEEEEEeCCEE-EEEEEecCCCceEEEEcCEEEEeeCCccCC
Confidence 023455666666666 89999997 99998877754 3555543 3654567799999999976543
No 199
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.96 E-value=2.5e-05 Score=80.93 Aligned_cols=101 Identities=20% Similarity=0.236 Sum_probs=72.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+.... .++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~d-------------------------------- 225 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGSETHLVIRGETVLR-------KFD-------------------------------- 225 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTCEEEEECSSSSSCT-------TSC--------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEeCCcccc-------ccC--------------------------------
Confidence 35799999999999999999999999999999753110 000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe-EEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGT-IKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~-v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+.|.+.+++. |++++.++ ++++..++++ + +.+..++|+ .++.+|.||.|.|.....
T Consensus 226 ----~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~--~~v~~~~G~-~~i~~D~vv~a~G~~p~~ 287 (479)
T 2hqm_A 226 ----ECIQNTITDHYVKE-GINVHKLSKIVKVEKNVETDK--LKIHMNDSK-SIDDVDELIWTIGRKSHL 287 (479)
T ss_dssp ----HHHHHHHHHHHHHH-TCEEECSCCEEEEEECC-CCC--EEEEETTSC-EEEEESEEEECSCEEECC
T ss_pred ----HHHHHHHHHHHHhC-CeEEEeCCEEEEEEEcCCCcE--EEEEECCCc-EEEEcCEEEECCCCCCcc
Confidence 12344555555555 89999997 9998765432 2 334456773 246799999999987654
No 200
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.95 E-value=1.8e-05 Score=81.57 Aligned_cols=99 Identities=23% Similarity=0.317 Sum_probs=71.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||++|+-+|..|++.|.+|+|+|+.+...+ ..
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 210 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARERILP-------TY--------------------------------- 210 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEEcCCcccc-------cc---------------------------------
Confidence 45899999999999999999999999999999853211 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++.. +. +.+...+|+..++.+|.||.|.|.....
T Consensus 211 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~--~~---v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 211 ---DSELTAPVAESLKKL-GIALHLGHSVEGYEN--GC---LLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp ---CHHHHHHHHHHHHHH-TCEEETTCEEEEEET--TE---EEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEECCEEEEEEe--CC---EEEEECCCceEEEECCEEEECcCCCcCC
Confidence 012444555556665 89999997 888875 33 3344445643456799999999987654
No 201
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=97.95 E-value=2.7e-05 Score=80.40 Aligned_cols=102 Identities=23% Similarity=0.298 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+...+ .+
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 210 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGVDVTIVEFLPRALP-------NE--------------------------------- 210 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEEcCCcccc-------cc---------------------------------
Confidence 45899999999999999999999999999999853110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++..+++.+ .+.+. .+|+..++.+|.||.|.|.....
T Consensus 211 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~-~~g~~~~~~~D~vv~a~G~~p~~ 273 (464)
T 2a8x_A 211 ---DADVSKEIEKQFKKL-GVTILTATKVESIADGGSQV-TVTVT-KDGVAQELKAEKVLQAIGFAPNV 273 (464)
T ss_dssp ---CHHHHHHHHHHHHHH-TCEEECSCEEEEEEECSSCE-EEEEE-SSSCEEEEEESEEEECSCEEECC
T ss_pred ---CHHHHHHHHHHHHHc-CCEEEeCcEEEEEEEcCCeE-EEEEE-cCCceEEEEcCEEEECCCCCccC
Confidence 012344555556665 89999997 88887765543 23332 35654567799999999976543
No 202
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.95 E-value=1.5e-05 Score=84.16 Aligned_cols=54 Identities=22% Similarity=0.366 Sum_probs=41.5
Q ss_pred HHHHcCCCeEEEece-EEEEEee----C-CeEEEEEEEeCCC-cEEEEec-CEEEEecCCCc
Q 010765 146 EKAASLPNVRLEQGT-VTSLLEE----N-GTIKGVQYKTKDG-QELRAYA-PLTIVCDGCFS 199 (502)
Q Consensus 146 ~~a~~~~~v~i~~~~-v~~~~~~----~-~~v~~v~~~~~~G-~~~~v~a-d~vI~ADG~~S 199 (502)
..+.+.+|++|..++ |+.+..+ + ++++||++...+| +.++++| +-||.|-|+..
T Consensus 215 ~p~~~r~NL~Vlt~a~V~rIl~~~~~~g~~rA~GVe~~~~~g~~~~~v~A~kEVILsAGai~ 276 (566)
T 3fim_B 215 RPAQSRPNLSVLINAQVTKLVNSGTTNGLPAFRCVEYAEQEGAPTTTVCAKKEVVLSAGSVG 276 (566)
T ss_dssp HHHTTCTTEEEESSCEEEEEECCEEETTEEECCEEEEESSTTSCCEEEEEEEEEEECCHHHH
T ss_pred hhhccCCCeEEECCCEEEEEEeecCCCCCCEEEEEEEEECCCceEEEEEeeeEEEEecCCcC
Confidence 344456799999998 9999876 3 4678999887666 7777888 77888988753
No 203
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=97.94 E-value=4.9e-05 Score=77.63 Aligned_cols=100 Identities=20% Similarity=0.270 Sum_probs=73.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+....+.
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~G~~Vtlv~~~~~~l~~~---------------------------------------- 188 (431)
T 1q1r_A 149 DNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAARVLERV---------------------------------------- 188 (431)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSTTTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCccccch----------------------------------------
Confidence 4589999999999999999999999999999975321100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEe--eCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLE--ENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~--~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
....+.+.+.+.+++. |++++.++ ++++.. +++++.+| ..++|++ +.+|.||.|.|....
T Consensus 189 --~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~v~~v--~~~~G~~--i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 189 --TAPPVSAFYEHLHREA-GVDIRTGTQVCGFEMSTDQQKVTAV--LCEDGTR--LPADLVIAGIGLIPN 251 (431)
T ss_dssp --SCHHHHHHHHHHHHHH-TCEEECSCCEEEEEECTTTCCEEEE--EETTSCE--EECSEEEECCCEEEC
T ss_pred --hhHHHHHHHHHHHHhC-CeEEEeCCEEEEEEeccCCCcEEEE--EeCCCCE--EEcCEEEECCCCCcC
Confidence 0012344555666665 89999997 999886 45555444 3567764 559999999997654
No 204
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.93 E-value=0.00011 Score=72.02 Aligned_cols=100 Identities=14% Similarity=0.170 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|++++|.+....
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~~V~~v~~~~~~~~------------------------------------------ 189 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTARRITLIHRRPQFRA------------------------------------------ 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCCEEEEEEcCCccCc------------------------------------------
Confidence 45799999999999999999999999999999743100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.|.+.+++. +++++.++ +.++.. ++++.+|.+... +|+..++.+|.||.|.|....
T Consensus 190 ---~~~~~~~l~~~l~~~-gv~v~~~~~v~~i~~-~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p~ 253 (335)
T 2zbw_A 190 ---HEASVKELMKAHEEG-RLEVLTPYELRRVEG-DERVRWAVVFHNQTQEELALEVDAVLILAGYITK 253 (335)
T ss_dssp ---CHHHHHHHHHHHHTT-SSEEETTEEEEEEEE-SSSEEEEEEEETTTCCEEEEECSEEEECCCEEEE
T ss_pred ---cHHHHHHHHhccccC-CeEEecCCcceeEcc-CCCeeEEEEEECCCCceEEEecCEEEEeecCCCC
Confidence 011234556666666 89999997 888877 455556666543 676556789999999997643
No 205
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.93 E-value=7.7e-05 Score=72.61 Aligned_cols=95 Identities=20% Similarity=0.258 Sum_probs=71.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~~g~~V~~i~~~~~~~~------------------------------------------- 192 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMC------------------------------------------- 192 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTTTBSEEEEECSSSSCCS-------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCcEEEEEcCCccCC-------------------------------------------
Confidence 5799999999999999999999999999998742100
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
...+.+.+.+. |++++.++ ++++..+++++.+|.+.. .+|+..++.+|.||.|.|...
T Consensus 193 ------~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 193 ------ENAYVQEIKKR-NIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp ------CHHHHHHHHHT-TCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred ------CHHHHHHHhcC-CcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 01123333344 89999997 889887666566777764 467766788999999998654
No 206
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.93 E-value=7.2e-05 Score=77.79 Aligned_cols=102 Identities=22% Similarity=0.315 Sum_probs=75.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... ..
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGVIVKVFGRSGSVAN-------LQ--------------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTCEEEEECCTTCCTT-------CC---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------cC---------------------------------
Confidence 46899999999999999999999999999999853211 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. ++++.++ ++++..+++.+. +.+.+.+|+..++.+|.||.|.|.....
T Consensus 214 ---d~~~~~~l~~~l~~~--V~i~~~~~v~~i~~~~~~v~-v~~~~~~G~~~~i~~D~Vi~a~G~~p~~ 276 (492)
T 3ic9_A 214 ---DEEMKRYAEKTFNEE--FYFDAKARVISTIEKEDAVE-VIYFDKSGQKTTESFQYVLAATGRKANV 276 (492)
T ss_dssp ---CHHHHHHHHHHHHTT--SEEETTCEEEEEEECSSSEE-EEEECTTCCEEEEEESEEEECSCCEESC
T ss_pred ---CHHHHHHHHHHHhhC--cEEEECCEEEEEEEcCCEEE-EEEEeCCCceEEEECCEEEEeeCCccCC
Confidence 012455566666654 8999987 888887766543 4444347765667899999999986543
No 207
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.93 E-value=3e-05 Score=80.76 Aligned_cols=32 Identities=28% Similarity=0.561 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-CCCeEEEEec
Q 010765 54 PTDVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~-~G~~v~lvEr 85 (502)
++||+|||||++|+++|+.|++ .|++|+|||+
T Consensus 7 ~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 7 AFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred ccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 5899999999999999999999 9999999994
No 208
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.93 E-value=2e-05 Score=81.48 Aligned_cols=103 Identities=16% Similarity=0.286 Sum_probs=74.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...+ ..
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------~~--------------------------------- 216 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASEIVP-------TM--------------------------------- 216 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCcccc-------cc---------------------------------
Confidence 45799999999999999999999999999999853211 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ +.++..+++.+ .+.+.+. +|+..++.+|.||.|.|.....
T Consensus 217 ---~~~~~~~l~~~l~~~-gv~i~~~~~v~~i~~~~~~~-~v~~~~~~~g~~~~~~~D~vv~a~G~~p~~ 281 (470)
T 1dxl_A 217 ---DAEIRKQFQRSLEKQ-GMKFKLKTKVVGVDTSGDGV-KLTVEPSAGGEQTIIEADVVLVSAGRTPFT 281 (470)
T ss_dssp ---CHHHHHHHHHHHHHS-SCCEECSEEEEEEECSSSSE-EEEEEESSSCCCEEEEESEEECCCCEEECC
T ss_pred ---cHHHHHHHHHHHHHc-CCEEEeCCEEEEEEEcCCeE-EEEEEecCCCcceEEECCEEEECCCCCcCC
Confidence 012455666677776 89999997 88887665543 3444432 4543456799999999987653
No 209
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.92 E-value=2.9e-05 Score=80.58 Aligned_cols=101 Identities=14% Similarity=0.201 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+...+ .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~~Vtlv~~~~~~l~-------~~--------------------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMDGLMQ-------GA--------------------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEECCcccc-------cc---------------------------------
Confidence 45899999999999999999999999999999753111 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CC-CcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KD-GQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~-G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ +.++..+++.+ .|++.+ .+ |++ +.+|.||.|.|...+.
T Consensus 225 ---~~~~~~~l~~~l~~~-gV~i~~~~~v~~i~~~~~~~-~v~~~~~~~~g~~--~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 225 ---DRDLVKVWQKQNEYR-FDNIMVNTKTVAVEPKEDGV-YVTFEGANAPKEP--QRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ---CHHHHHHHHHHHGGG-EEEEECSCEEEEEEEETTEE-EEEEESSSCCSSC--EEESCEEECCCEEECG
T ss_pred ---CHHHHHHHHHHHHhc-CCEEEECCEEEEEEEcCCeE-EEEEeccCCCceE--EEcCEEEECcCCCcCC
Confidence 012455666777776 89999997 99988776542 344432 11 554 4599999999987654
No 210
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=97.92 E-value=5.8e-05 Score=77.56 Aligned_cols=100 Identities=23% Similarity=0.360 Sum_probs=73.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+. +
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------~--------------------------------- 189 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNYNVNLIDGHERVLYKY------F--------------------------------- 189 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSTTTTT------S---------------------------------
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCCEEEEEEcCCchhhhh------h---------------------------------
Confidence 3579999999999999999999999999999975321100 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++..+++++..+. .+|++ +.+|.||.|.|.....
T Consensus 190 ---~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~v~~v~---~~g~~--i~~D~vv~a~G~~p~~ 249 (452)
T 2cdu_A 190 ---DKEFTDILAKDYEAH-GVNLVLGSKVAAFEEVDDEIITKT---LDGKE--IKSDIAILCIGFRPNT 249 (452)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEEESSCEEEEEEETTEEEEEE---TTSCE--EEESEEEECCCEEECC
T ss_pred ---hhhHHHHHHHHHHHC-CCEEEcCCeeEEEEcCCCeEEEEE---eCCCE--EECCEEEECcCCCCCH
Confidence 012455666667776 89999997 999987666554333 26654 5699999999987654
No 211
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.92 E-value=7.6e-06 Score=85.34 Aligned_cols=40 Identities=35% Similarity=0.461 Sum_probs=35.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
..+||+|||||++||++|+.|+++|++|+|+|++....++
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~GG~ 51 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEGKAGGK 51 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSSSSCSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEeCCCCCCc
Confidence 3579999999999999999999999999999999776543
No 212
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.92 E-value=5.5e-05 Score=78.26 Aligned_cols=105 Identities=17% Similarity=0.214 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...++ .
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~------~---------------------------------- 217 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGADVTAVEFLGHVGGV------G---------------------------------- 217 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSCS------S----------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHcCCEEEEEeccCccCCc------c----------------------------------
Confidence 357999999999999999999999999999998532110 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.+++. |++++.++ ++++..+++....+++.. .+++..++.+|.||.|.|.....
T Consensus 218 --~~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~~ 284 (474)
T 1zmd_A 218 --IDMEISKNFQRILQKQ-GFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPFT 284 (474)
T ss_dssp --CCHHHHHHHHHHHHHT-TCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEECC
T ss_pred --cCHHHHHHHHHHHHHC-CCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcCC
Confidence 0012455666667776 89999997 999887665412344332 12222346799999999987653
No 213
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=97.91 E-value=5.9e-06 Score=85.98 Aligned_cols=39 Identities=28% Similarity=0.440 Sum_probs=35.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
++||+|||||++||++|..|++.|++|+|+|++....+|
T Consensus 39 ~~~v~iiGaG~aGl~aA~~l~~~g~~v~v~E~~~~~GGr 77 (495)
T 2vvm_A 39 PWDVIVIGGGYCGLTATRDLTVAGFKTLLLEARDRIGGR 77 (495)
T ss_dssp CEEEEEECCBHHHHHHHHHHHHTTCCEEEECSSSBSBTT
T ss_pred CCCEEEECCcHHHHHHHHHHHHCCCCEEEEeCCCCCCCc
Confidence 479999999999999999999999999999999766554
No 214
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.90 E-value=1.8e-05 Score=82.45 Aligned_cols=37 Identities=27% Similarity=0.445 Sum_probs=32.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTE 89 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~ 89 (502)
..+||+|||||++|+++|..|++. |.+|+|||+.+..
T Consensus 10 ~~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~~~~ 48 (493)
T 1m6i_A 10 SHVPFLLIGGGTAAFAAARSIRARDPGARVLIVSEDPEL 48 (493)
T ss_dssp SEEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESSSSC
T ss_pred CcCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCCCCC
Confidence 457999999999999999999887 8999999998643
No 215
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.89 E-value=0.00014 Score=70.87 Aligned_cols=96 Identities=21% Similarity=0.251 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~~Vtlv~~~~~~~~------------------------------------------ 189 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFADEVTVIHRRDTLRA------------------------------------------ 189 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCCEEEEEeCCCcCCc------------------------------------------
Confidence 35799999999999999999999999999998742100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
...+.+.+.+..+++++.++ ++++..+ +++.+|.+.+ .+|+..++.+|.||.|.|...
T Consensus 190 -------~~~~~~~l~~~~gv~i~~~~~v~~i~~~-~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 190 -------NKVAQARAFANPKMKFIWDTAVEEIQGA-DSVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp -------CHHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred -------chHHHHHHHhcCCceEecCCceEEEccC-CcEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 01123344443489999997 8888764 5555677765 467766778999999999653
No 216
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.88 E-value=0.00014 Score=71.03 Aligned_cols=97 Identities=19% Similarity=0.216 Sum_probs=71.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~~g~~V~lv~~~~~~~~------------------------------------------ 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTKYGSKVYIIHRRDAFRA------------------------------------------ 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHhcCCeEEEEecCCcCCc------------------------------------------
Confidence 45799999999999999999999999999999743100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC--eEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG--TIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~--~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+.+.+.+.+..+++++.++ ++++..+++ ++.+|.+.+ .+|+..++.+|.||.|.|...
T Consensus 197 -------~~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 197 -------SKIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp -------CHHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred -------cHHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCcc
Confidence 01122223223489999987 888877654 565677765 367656788999999999654
No 217
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=97.87 E-value=4.9e-05 Score=78.97 Aligned_cols=100 Identities=13% Similarity=0.179 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC---CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~---G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
.-+|+|||||..|+-+|..|++. |.+|+|+|+.+...+ .+
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------~~------------------------------ 229 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDMILR-------GF------------------------------ 229 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSSSST-------TS------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcCeEEEEEcCCCccc-------cc------------------------------
Confidence 35899999999999999999999 999999999853110 00
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ |+++..++++. +.+..++|++ +.+|.||.|.|.....
T Consensus 230 ------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~~--i~~D~vv~a~G~~p~~ 290 (490)
T 1fec_A 230 ------DSELRKQLTEQLRAN-GINVRTHENPAKVTKNADGT--RHVVFESGAE--ADYDVVMLAIGRVPRS 290 (490)
T ss_dssp ------CHHHHHHHHHHHHHT-TEEEEETCCEEEEEECTTSC--EEEEETTSCE--EEESEEEECSCEEESC
T ss_pred ------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCE--EEEEECCCcE--EEcCEEEEccCCCcCc
Confidence 012455666677776 89999997 99998765432 3344567764 5699999999976543
No 218
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.87 E-value=8.7e-06 Score=81.39 Aligned_cols=37 Identities=41% Similarity=0.488 Sum_probs=33.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~ 91 (502)
+||+|||||++||++|..|++.|++|+|+|+++...+
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~GG 38 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNKKVLVIEKRNHIGG 38 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTCCEEEECSSSSSSG
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEecCCCCCc
Confidence 6999999999999999999999999999999865443
No 219
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.86 E-value=0.0001 Score=77.19 Aligned_cols=95 Identities=22% Similarity=0.263 Sum_probs=74.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||.+|+-+|..|++.|.+|+++++.+... .
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~~g~~Vtlv~~~~~l~-----------~-------------------------------- 392 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAGIVEHVTLLEFAPEMK-----------A-------------------------------- 392 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHBSEEEEECSSSSCC-----------S--------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCEEEEEEeCcccC-----------c--------------------------------
Confidence 479999999999999999999999999999874310 0
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
...+.+.+.+.+|++++.++ ++++..+++++.++.+.+ .+|+..++.+|.||.|.|..
T Consensus 393 ------~~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~ 452 (521)
T 1hyu_A 393 ------DQVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLL 452 (521)
T ss_dssp ------CHHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEE
T ss_pred ------CHHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCC
Confidence 01344555554689999997 888887767777787776 46776678899999999854
No 220
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=97.85 E-value=4.9e-05 Score=79.17 Aligned_cols=99 Identities=22% Similarity=0.282 Sum_probs=75.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-.|+|||||..|+-+|..|++.|.+|+++|+.+...+. +
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~-------~--------------------------------- 221 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGVPVTVVASQDHVLPY-------E--------------------------------- 221 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTCCEEEECSSSSSSCC-------S---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCccccc-------c---------------------------------
Confidence 458999999999999999999999999999997531110 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ |+++..++++ +.+...+|++ +.+|.||.|.|..++.
T Consensus 222 ---d~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~~~~---v~v~~~~g~~--i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 222 ---DADAALVLEESFAER-GVRLFKNARAASVTRTGAG---VLVTMTDGRT--VEGSHALMTIGSVPNT 281 (499)
T ss_dssp ---SHHHHHHHHHHHHHT-TCEEETTCCEEEEEECSSS---EEEEETTSCE--EEESEEEECCCEEECC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEeCCE---EEEEECCCcE--EEcCEEEECCCCCcCC
Confidence 012455666777776 89999997 9999876654 3455667765 4599999999988764
No 221
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=97.85 E-value=0.00011 Score=74.57 Aligned_cols=95 Identities=27% Similarity=0.341 Sum_probs=70.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+.
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 184 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATARTAGVHVSLVETQPRLMSRA---------------------------------------- 184 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCEEEEEEeCCcccccc----------------------------------------
Confidence 4689999999999999999999999999999985321100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
....+.+.+.+.+++. |++++.++ ++++. ++ .| ..++|++ +.+|.||.|.|....
T Consensus 185 --~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~--~~---~v--~~~~g~~--i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 185 --APATLADFVARYHAAQ-GVDLRFERSVTGSV--DG---VV--LLDDGTR--IAADMVVVGIGVLAN 240 (408)
T ss_dssp --SCHHHHHHHHHHHHHT-TCEEEESCCEEEEE--TT---EE--EETTSCE--EECSEEEECSCEEEC
T ss_pred --cCHHHHHHHHHHHHHc-CcEEEeCCEEEEEE--CC---EE--EECCCCE--EEcCEEEECcCCCcc
Confidence 0012445566666666 89999997 88887 34 23 3467764 569999999998754
No 222
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.85 E-value=5.2e-05 Score=78.89 Aligned_cols=100 Identities=11% Similarity=0.171 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC---CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD---GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~---G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
.-.|+|||||..|+-+|..|++. |.+|+|+|+.+.... .+
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~~Vtlv~~~~~~l~-------~~------------------------------ 233 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGGKVTLCYRNNLILR-------GF------------------------------ 233 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTCEEEEEESSSSSCT-------TS------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEEcCCcccc-------cc------------------------------
Confidence 35799999999999999999999 999999999753111 00
Q ss_pred cceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 131 SGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 131 ~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ |+++..++++. +.+...+|++ +.+|.||.|.|.....
T Consensus 234 ------d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~--~~v~~~~G~~--i~~D~vv~a~G~~p~~ 294 (495)
T 2wpf_A 234 ------DETIREEVTKQLTAN-GIEIMTNENPAKVSLNTDGS--KHVTFESGKT--LDVDVVMMAIGRIPRT 294 (495)
T ss_dssp ------CHHHHHHHHHHHHHT-TCEEEESCCEEEEEECTTSC--EEEEETTSCE--EEESEEEECSCEEECC
T ss_pred ------CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCce--EEEEECCCcE--EEcCEEEECCCCcccc
Confidence 012445566666666 89999997 99988765432 3344567864 5699999999976554
No 223
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.83 E-value=1.4e-05 Score=80.30 Aligned_cols=37 Identities=32% Similarity=0.648 Sum_probs=33.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
++||+|||||++|+++|..|++.|++|+|+|++....
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~~v~v~E~~~~~G 39 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDHIG 39 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCCcEEEEEecCCcC
Confidence 4799999999999999999999999999999986543
No 224
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=97.82 E-value=4.6e-05 Score=77.25 Aligned_cols=100 Identities=27% Similarity=0.376 Sum_probs=73.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|..|+-+|..|++.|.+|+++|+.+....+. +
T Consensus 143 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~------~--------------------------------- 183 (410)
T 3ef6_A 143 ATRLLIVGGGLIGCEVATTARKLGLSVTILEAGDELLVRV------L--------------------------------- 183 (410)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSSHHH------H---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccchhh------c---------------------------------
Confidence 4589999999999999999999999999999985321100 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ +.++..++ .+.+ +..++|++ +.+|.||.|.|..+..
T Consensus 184 ---~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~-~~~~--v~~~dg~~--i~aD~Vv~a~G~~p~~ 243 (410)
T 3ef6_A 184 ---GRRIGAWLRGLLTEL-GVQVELGTGVVGFSGEG-QLEQ--VMASDGRS--FVADSALICVGAEPAD 243 (410)
T ss_dssp ---CHHHHHHHHHHHHHH-TCEEECSCCEEEEECSS-SCCE--EEETTSCE--EECSEEEECSCEEECC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEeccC-cEEE--EEECCCCE--EEcCEEEEeeCCeecH
Confidence 012455566666665 89999987 88887654 3323 44577875 4599999999987653
No 225
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=97.82 E-value=0.00011 Score=76.27 Aligned_cols=99 Identities=23% Similarity=0.312 Sum_probs=72.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+. +
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~~g~~Vtlv~~~~~~l~~~------~--------------------------------- 234 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQRKGKEVVLIDVVDTCLAGY------Y--------------------------------- 234 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT------S---------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHHCCCeEEEEEcccchhhhH------H---------------------------------
Confidence 4579999999999999999999999999999985321100 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++.. ++++..+.. +|++ +.+|.||.|.|.....
T Consensus 235 ---~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~-~~~v~~v~~---~g~~--i~~D~Vi~a~G~~p~~ 293 (490)
T 2bc0_A 235 ---DRDLTDLMAKNMEEH-GIQLAFGETVKEVAG-NGKVEKIIT---DKNE--YDVDMVILAVGFRPNT 293 (490)
T ss_dssp ---CHHHHHHHHHHHHTT-TCEEEETCCEEEEEC-SSSCCEEEE---SSCE--EECSEEEECCCEEECC
T ss_pred ---HHHHHHHHHHHHHhC-CeEEEeCCEEEEEEc-CCcEEEEEE---CCcE--EECCEEEECCCCCcCh
Confidence 012455667777776 89999997 888876 443333432 5654 5699999999976543
No 226
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.82 E-value=0.00015 Score=74.87 Aligned_cols=101 Identities=21% Similarity=0.265 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|+.|+-+|..|++.|.+|+++|+.+.... ..
T Consensus 180 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~--------------------------------- 219 (476)
T 3lad_A 180 PGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDKFLP-------AV--------------------------------- 219 (476)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCcEEEEecCCCcCc-------cc---------------------------------
Confidence 45799999999999999999999999999999753110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ ++++..+++.+. +.+.+.+| ..++.+|.||.|.|....
T Consensus 220 ---~~~~~~~l~~~l~~~-Gv~v~~~~~v~~i~~~~~~~~-v~~~~~~g-~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 220 ---DEQVAKEAQKILTKQ-GLKILLGARVTGTEVKNKQVT-VKFVDAEG-EKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ---CHHHHHHHHHHHHHT-TEEEEETCEEEEEEECSSCEE-EEEESSSE-EEEEEESEEEECSCEEEC
T ss_pred ---CHHHHHHHHHHHHhC-CCEEEECCEEEEEEEcCCEEE-EEEEeCCC-cEEEECCEEEEeeCCccc
Confidence 012455666666666 89999997 899887666543 55544445 345779999999997544
No 227
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.82 E-value=1.6e-05 Score=82.49 Aligned_cols=39 Identities=28% Similarity=0.361 Sum_probs=34.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCC-CeEEEEecCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVTEP 90 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~~~~ 90 (502)
+..+||+|||||++||++|+.|+++| .+|+|+|+++...
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~~g~~~v~v~E~~~~~G 46 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTELGYKNWHLYECNDTPG 46 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESSSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 34689999999999999999999999 7999999986543
No 228
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.81 E-value=7.8e-05 Score=77.33 Aligned_cols=99 Identities=16% Similarity=0.262 Sum_probs=74.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vtli~~~~~~l~-------~~--------------------------------- 230 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGVKTTLLHRGDLILR-------NF--------------------------------- 230 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCeEEEEECCCcccc-------cc---------------------------------
Confidence 45899999999999999999999999999999753110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ |+++..+++++ .+..++|++ +.+|.||.|.|..+..
T Consensus 231 ---~~~~~~~l~~~l~~~-Gv~i~~~~~V~~i~~~~~~v---~v~~~~g~~--i~aD~Vi~A~G~~p~~ 290 (484)
T 3o0h_A 231 ---DYDLRQLLNDAMVAK-GISIIYEATVSQVQSTENCY---NVVLTNGQT--ICADRVMLATGRVPNT 290 (484)
T ss_dssp ---CHHHHHHHHHHHHHH-TCEEESSCCEEEEEECSSSE---EEEETTSCE--EEESEEEECCCEEECC
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEeeCCEE---EEEECCCcE--EEcCEEEEeeCCCcCC
Confidence 012445566666665 89999987 99998776653 455677864 5599999999976544
No 229
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.81 E-value=7.1e-06 Score=85.42 Aligned_cols=35 Identities=31% Similarity=0.427 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.++||+||||||+|+++|..|++.|.+|+|||++.
T Consensus 7 ~~~DvvVIGgG~aGl~aA~~la~~G~~V~liE~~~ 41 (492)
T 3ic9_A 7 INVDVAIIGTGTAGMGAYRAAKKHTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHTTCSCEEEEESSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 35899999999999999999999999999999974
No 230
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=97.80 E-value=0.00019 Score=73.67 Aligned_cols=99 Identities=18% Similarity=0.184 Sum_probs=74.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|+++|+.+....+.
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~---------------------------------------- 186 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKKTVHVFESLENLLPKY---------------------------------------- 186 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSSTTT----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCeEEEEEccCcccccc----------------------------------------
Confidence 3579999999999999999999999999999975321100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.+++. |++++.++ ++++..+++++ .+..++| ++.+|.||.|.|.....
T Consensus 187 --~d~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v---~v~~~~g---~i~aD~Vv~A~G~~p~~ 246 (452)
T 3oc4_A 187 --FDKEMVAEVQKSLEKQ-AVIFHFEETVLGIEETANGI---VLETSEQ---EISCDSGIFALNLHPQL 246 (452)
T ss_dssp --CCHHHHHHHHHHHHTT-TEEEEETCCEEEEEECSSCE---EEEESSC---EEEESEEEECSCCBCCC
T ss_pred --CCHHHHHHHHHHHHHc-CCEEEeCCEEEEEEccCCeE---EEEECCC---EEEeCEEEECcCCCCCh
Confidence 0023556677777777 89999987 99998766654 3344555 35699999999986543
No 231
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.79 E-value=1.4e-05 Score=83.12 Aligned_cols=41 Identities=39% Similarity=0.599 Sum_probs=36.0
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
....||+|||||++||++|..|++.|++|+|+|++....++
T Consensus 31 ~~~~~v~IiGaG~~Gl~aA~~l~~~g~~v~vlE~~~~~gg~ 71 (498)
T 2iid_A 31 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASERPGGR 71 (498)
T ss_dssp SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSSSSBTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCCeEEEEECCCCCCCc
Confidence 34679999999999999999999999999999998665443
No 232
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.79 E-value=0.00019 Score=74.48 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=73.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+++++... +..+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~--------l~~~--------------------------------- 223 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGLDTTVMMRSIP--------LRGF--------------------------------- 223 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS--------STTS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCceEEEEcCcc--------cccC---------------------------------
Confidence 45799999999999999999999999999998521 1100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ +.++...+++...+++.+. +|+..++.+|.||.|.|....
T Consensus 224 ---d~~~~~~l~~~l~~~-gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 224 ---DQQMSSLVTEHMESH-GTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 012455666666666 89999997 8888775443233555543 366556789999999997543
No 233
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.77 E-value=0.00014 Score=75.35 Aligned_cols=102 Identities=19% Similarity=0.207 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+++++... +..+
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~--------l~~~--------------------------------- 225 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGYEPTVMVRSIV--------LRGF--------------------------------- 225 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSCS--------STTS---------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCC--------Cccc---------------------------------
Confidence 35799999999999999999999999999998421 1100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ +.++..++++...|++.+. +|+..++.+|.||.|.|....
T Consensus 226 ---d~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 226 ---DQQMAELVAASMEER-GIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp ---CHHHHHHHHHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred ---CHHHHHHHHHHHHhC-CCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 012455666666666 89999997 8888875543223555543 355566789999999997543
No 234
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=97.77 E-value=2.1e-05 Score=80.40 Aligned_cols=56 Identities=20% Similarity=0.242 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
.+.+.|.+.+++. |++++.++ |+++..+++++.+|. .+|++ ++||.||.|.|.++.
T Consensus 235 ~l~~~l~~~~~~~-G~~i~~~~~V~~I~~~~~~v~~v~---~~g~~--~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIY-GGTYMLNKPVDDIIMENGKVVGVK---SEGEV--ARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHH-TCCCBCSCCCCEEEEETTEEEEEE---ETTEE--EECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHc-CCEEECCCEEEEEEEeCCEEEEEE---ECCeE--EECCEEEECCCCCcc
Confidence 5667777777776 78888887 999988888766554 25654 569999999999874
No 235
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=97.76 E-value=1.6e-05 Score=81.64 Aligned_cols=55 Identities=15% Similarity=0.202 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHcCCCeEEEece-EEEEEe-eCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 139 RFIQRMREKAASLPNVRLEQGT-VTSLLE-ENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 139 ~l~~~L~~~a~~~~~v~i~~~~-v~~~~~-~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
.+.+.|.+.+++. |++++.++ |+++.. +++++.+|+ ..+|++ ++||.||.+.|..
T Consensus 257 ~L~~aL~r~~~~~-Gg~i~l~t~V~~I~~d~~g~v~gV~--~~~G~~--i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAIN-GGTFMLNKNVVDFVFDDDNKVCGIK--SSDGEI--AYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC---CEESSCCEEEEEECTTSCEEEEE--ETTSCE--EEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHc-CCEEEeCCeEEEEEEecCCeEEEEE--ECCCcE--EECCEEEECCCcc
Confidence 5666777778887 89999998 999987 567766665 466775 4599999999876
No 236
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.76 E-value=0.00012 Score=75.63 Aligned_cols=99 Identities=25% Similarity=0.313 Sum_probs=74.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC-CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~-G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
.-+|+|||+|..|+-+|..|++. |.+|+++|+.+....+.
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~~Vtlv~~~~~~l~~~--------------------------------------- 199 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGIDTTVVELADQIMPGF--------------------------------------- 199 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCCEEEEECSSSSSSTTT---------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCCcEEEEEccCcccccc---------------------------------------
Confidence 45899999999999999999999 99999999974321100
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
....+.+.|.+.+++. |++++.++ ++++..+++.+. +...+|++ +.+|.||.|.|....
T Consensus 200 ---~~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~v~---v~~~~g~~--i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 200 ---TSKSLSQMLRHDLEKN-DVVVHTGEKVVRLEGENGKVA---RVITDKRT--LDADLVILAAGVSPN 259 (472)
T ss_dssp ---SCHHHHHHHHHHHHHT-TCEEECSCCEEEEEESSSBEE---EEEESSCE--EECSEEEECSCEEEC
T ss_pred ---cCHHHHHHHHHHHHhc-CCEEEeCCEEEEEEccCCeEE---EEEeCCCE--EEcCEEEECCCCCcC
Confidence 0123566677777776 89999997 999987666543 44456764 569999999998754
No 237
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=97.75 E-value=0.00019 Score=74.65 Aligned_cols=100 Identities=23% Similarity=0.303 Sum_probs=73.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhh----CCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGK----DGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHAD 129 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~----~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 129 (502)
.-+|+|||||..|+-+|..|++ .|.+|+++++.+....+..
T Consensus 180 ~~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~~~l----------------------------------- 224 (493)
T 1m6i_A 180 VKSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMGKIL----------------------------------- 224 (493)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTTTTS-----------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCcccccccC-----------------------------------
Confidence 3579999999999999999987 4889999998743111000
Q ss_pred CcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 130 VSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 130 ~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ |+++..+++.+ .+...+|++ +.+|.||.|.|...+.
T Consensus 225 -------~~~~~~~~~~~l~~~-GV~v~~~~~V~~i~~~~~~~---~v~l~dG~~--i~aD~Vv~a~G~~pn~ 284 (493)
T 1m6i_A 225 -------PEYLSNWTMEKVRRE-GVKVMPNAIVQSVGVSSGKL---LIKLKDGRK--VETDHIVAAVGLEPNV 284 (493)
T ss_dssp -------CHHHHHHHHHHHHTT-TCEEECSCCEEEEEEETTEE---EEEETTSCE--EEESEEEECCCEEECC
T ss_pred -------CHHHHHHHHHHHHhc-CCEEEeCCEEEEEEecCCeE---EEEECCCCE--EECCEEEECCCCCccH
Confidence 013455667777777 89999997 99998766643 355677865 5699999999987653
No 238
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.74 E-value=0.00017 Score=75.54 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=74.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-.++|||||+.|+=+|..+++.|.+|+|+++... +...+
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~~VTii~~~~~--------L~~~D-------------------------------- 262 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGYDVTVAVRSIV--------LRGFD-------------------------------- 262 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTCCEEEEESSCS--------STTSC--------------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHhcCCeEEEeccccc--------ccccc--------------------------------
Confidence 45799999999999999999999999999987521 11100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
.++...+.+.+++. |++++.+. +..+...++. +.+...++.... +|.|+.|.|..-++
T Consensus 263 ----~ei~~~l~~~l~~~-gi~~~~~~~v~~~~~~~~~---~~v~~~~~~~~~--~D~vLvAvGR~Pnt 321 (542)
T 4b1b_A 263 ----QQCAVKVKLYMEEQ-GVMFKNGILPKKLTKMDDK---ILVEFSDKTSEL--YDTVLYAIGRKGDI 321 (542)
T ss_dssp ----HHHHHHHHHHHHHT-TCEEEETCCEEEEEEETTE---EEEEETTSCEEE--ESEEEECSCEEESC
T ss_pred ----hhHHHHHHHHHHhh-cceeecceEEEEEEecCCe---EEEEEcCCCeEE--EEEEEEcccccCCc
Confidence 12455666667776 89999998 8888888774 445566776544 89999999987655
No 239
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.72 E-value=0.00019 Score=75.88 Aligned_cols=98 Identities=16% Similarity=0.241 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||..|+-+|..|++.|.+|+++|+.+.... ..
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~---------------------------------- 190 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHHLGIKTTLLELADQVMT-------PV---------------------------------- 190 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSSCT-------TS----------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCcEEEEEcCCccch-------hc----------------------------------
Confidence 4899999999999999999999999999999753111 00
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-------------------CCeEEEEEEEeCCCcEEEEecCEEEEe
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-------------------NGTIKGVQYKTKDGQELRAYAPLTIVC 194 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~-------------------~~~v~~v~~~~~~G~~~~v~ad~vI~A 194 (502)
...+...+.+.+++. |++++.++ ++++..+ ++. +.+...+|++ +.+|.||.|
T Consensus 191 --~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~g~~--i~~D~vi~a 262 (565)
T 3ntd_A 191 --DREMAGFAHQAIRDQ-GVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGH---LSLTLSNGEL--LETDLLIMA 262 (565)
T ss_dssp --CHHHHHHHHHHHHHT-TCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCE---EEEEETTSCE--EEESEEEEC
T ss_pred --CHHHHHHHHHHHHHC-CCEEEeCCeEEEEeccccccccccccccccccccCCCc---EEEEEcCCCE--EEcCEEEEC
Confidence 012445556666666 89999987 8888763 443 3444577774 569999999
Q ss_pred cCCCchh
Q 010765 195 DGCFSNL 201 (502)
Q Consensus 195 DG~~S~v 201 (502)
.|.....
T Consensus 263 ~G~~p~~ 269 (565)
T 3ntd_A 263 IGVRPET 269 (565)
T ss_dssp SCEEECC
T ss_pred cCCccch
Confidence 9987653
No 240
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.72 E-value=0.00032 Score=67.92 Aligned_cols=97 Identities=20% Similarity=0.168 Sum_probs=71.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.|.+|+++++.+....
T Consensus 154 ~~~v~vvG~G~~~~e~a~~l~~~g~~v~~~~~~~~~~~------------------------------------------ 191 (323)
T 3f8d_A 154 NRVVAVIGGGDSALEGAEILSSYSTKVYLIHRRDTFKA------------------------------------------ 191 (323)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHSSEEEEECSSSSCCS------------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEeCCCCCc------------------------------------------
Confidence 45899999999999999999999999999998743110
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
. ..+.+.+.+..|++++.++ +.++..+ +++.+|.+.+ .+|+..++.+|.||.|.|....
T Consensus 192 ---~----~~~~~~~~~~~gv~~~~~~~v~~i~~~-~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 252 (323)
T 3f8d_A 192 ---Q----PIYVETVKKKPNVEFVLNSVVKEIKGD-KVVKQVVVENLKTGEIKELNVNGVFIEIGFDPP 252 (323)
T ss_dssp ---C----HHHHHHHHTCTTEEEECSEEEEEEEES-SSEEEEEEEETTTCCEEEEECSEEEECCCEECC
T ss_pred ---C----HHHHHHHHhCCCcEEEeCCEEEEEecc-CceeEEEEEECCCCceEEEEcCEEEEEECCCCC
Confidence 0 0122333444489999998 8888765 4555676665 4577667789999999996543
No 241
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.71 E-value=0.00014 Score=75.21 Aligned_cols=98 Identities=23% Similarity=0.343 Sum_probs=71.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcc
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSG 132 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 132 (502)
...+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... .+
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~-------~~-------------------------------- 225 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGKKVRMIERNDHIGT-------IY-------------------------------- 225 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTCEEEEECCGGGTTS-------SS--------------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCeEEEEEeCCchhh-------cC--------------------------------
Confidence 356899999999999999999999999999999742110 00
Q ss_pred eeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 133 RSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 133 ~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ ++++..+ +++..+. .+ +. ++.+|.||.|.|..+.
T Consensus 226 ----~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~-~~v~~v~--~~-~~--~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 226 ----DGDMAEYIYKEADKH-HIEILTNENVKAFKGN-ERVEAVE--TD-KG--TYKADLVLVSVGVKPN 283 (480)
T ss_dssp ----CHHHHHHHHHHHHHT-TCEEECSCCEEEEEES-SBEEEEE--ET-TE--EEECSEEEECSCEEES
T ss_pred ----CHHHHHHHHHHHHHc-CcEEEcCCEEEEEEcC-CcEEEEE--EC-CC--EEEcCEEEECcCCCcC
Confidence 023456667777776 89999987 8888764 4443333 33 33 4679999999998654
No 242
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.71 E-value=3.3e-05 Score=79.47 Aligned_cols=37 Identities=38% Similarity=0.426 Sum_probs=33.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
....||+||||||+|+++|..|++.|++|+|||+.+.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~~G~~V~v~e~~~~ 156 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRAKGYEVHVYDRYDR 156 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSS
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCC
Confidence 3467999999999999999999999999999999854
No 243
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.69 E-value=0.00029 Score=73.73 Aligned_cols=101 Identities=14% Similarity=0.166 Sum_probs=70.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+|+++... +..++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~~Vtlv~~~~~--------l~~~d-------------------------------- 249 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGLDVTVMVRSIL--------LRGFD-------------------------------- 249 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESSCS--------STTSC--------------------------------
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCCeEEEEecccc--------cccCC--------------------------------
Confidence 34699999999999999999999999999998511 11000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCC---eEEEEEEEeCCCc-EEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENG---TIKGVQYKTKDGQ-ELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~---~v~~v~~~~~~G~-~~~v~ad~vI~ADG~~S 199 (502)
..+.+.+.+.+++. |++++.++ ++++...++ ....+.+...+|. ..++.+|.||.|.|...
T Consensus 250 ----~~~~~~~~~~l~~~-GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p 315 (519)
T 3qfa_A 250 ----QDMANKIGEHMEEH-GIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDA 315 (519)
T ss_dssp ----HHHHHHHHHHHHHT-TCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEE
T ss_pred ----HHHHHHHHHHHHHC-CCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCcc
Confidence 12455566666666 89999986 777765331 2223555555653 35677999999999654
No 244
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.68 E-value=0.0002 Score=73.81 Aligned_cols=97 Identities=16% Similarity=0.226 Sum_probs=72.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||+.|+-+|..|++.|.+|+++|+.+... . .
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~-~--------------------------------- 214 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGSKVTVLARNTLFF-------R-E--------------------------------- 214 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTT-------T-S---------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCEEEEEEECCccC-------C-C---------------------------------
Confidence 4579999999999999999999999999999974311 0 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.|.+.+++. |++++.++ |+++..+++.+ .+..+ +. ++.+|.||.|.|..+..
T Consensus 215 ---~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~---~v~~~-~~--~i~aD~Vv~a~G~~p~~ 273 (467)
T 1zk7_A 215 ---DPAIGEAVTAAFRAE-GIEVLEHTQASQVAHMDGEF---VLTTT-HG--ELRADKLLVATGRTPNT 273 (467)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEETTCCEEEEEEETTEE---EEEET-TE--EEEESEEEECSCEEESC
T ss_pred ---CHHHHHHHHHHHHhC-CCEEEcCCEEEEEEEeCCEE---EEEEC-Cc--EEEcCEEEECCCCCcCC
Confidence 012455667777776 89999997 99998766532 23344 33 46699999999987664
No 245
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.68 E-value=3.5e-05 Score=80.82 Aligned_cols=37 Identities=27% Similarity=0.303 Sum_probs=34.1
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
+.++||+|||||++|+++|..|++.|.+|+|||++..
T Consensus 41 ~~~~dVvIIGgG~aGl~aA~~l~~~G~~V~liE~~~~ 77 (523)
T 1mo9_A 41 PREYDAIFIGGGAAGRFGSAYLRAMGGRQLIVDRWPF 77 (523)
T ss_dssp CSCBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSSS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4468999999999999999999999999999999863
No 246
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.67 E-value=0.00025 Score=73.32 Aligned_cols=103 Identities=15% Similarity=0.113 Sum_probs=71.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||||..|+-+|..|++.|.+|+++++.+... ...
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l-------~~~--------------------------------- 226 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHDKVL-------RSF--------------------------------- 226 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSC-------TTS---------------------------------
T ss_pred CccEEEECCCHHHHHHHHHHHHcCCeEEEEEeCCccc-------ccc---------------------------------
Confidence 4579999999999999999999999999999874311 000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCe-EEEEEEEeC-CCcE--EEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGT-IKGVQYKTK-DGQE--LRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~-v~~v~~~~~-~G~~--~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ ++++..++++ ...+...+. +|+. .++.+|.||.|.|....
T Consensus 227 ---d~~~~~~~~~~l~~~-gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 227 ---DSMISTNCTEELENA-GVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred ---CHHHHHHHHHHHHHC-CCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 012445566666666 89999997 8888876544 222333221 1332 45779999999997543
No 247
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.67 E-value=2.9e-05 Score=80.90 Aligned_cols=34 Identities=26% Similarity=0.523 Sum_probs=32.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
++||+|||||++|+++|..|++.|.+|+|||++.
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence 4899999999999999999999999999999984
No 248
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.67 E-value=0.00031 Score=74.80 Aligned_cols=100 Identities=17% Similarity=0.214 Sum_probs=70.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||..|+-+|..|++.|.+|+|++|. .. +..++
T Consensus 287 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~-~~-------l~~~d--------------------------------- 325 (598)
T 2x8g_A 287 GKTLVIGASYVALECAGFLASLGGDVTVMVRS-IL-------LRGFD--------------------------------- 325 (598)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESS-CS-------STTSC---------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHHcCCEEEEEECC-cC-------cCcCC---------------------------------
Confidence 47999999999999999999999999999986 11 00000
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEee------C---CeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE------N---GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~------~---~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+...+.+.+++. |++++.++ +.++... + +.+ .+.+...+|++.++.+|.||.|.|....
T Consensus 326 ---~~~~~~~~~~l~~~-gv~i~~~~~v~~v~~~~~~~~~~~~~~~~-~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 326 ---QQMAEKVGDYMENH-GVKFAKLCVPDEIKQLKVVDTENNKPGLL-LVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp ---HHHHHHHHHHHHHT-TCEEEETEEEEEEEEEECCBTTTTBCCEE-EEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred ---HHHHHHHHHHHHhC-CCEEEECCeEEEEEeccccccccCCCceE-EEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 11334455556665 89999987 7777542 2 332 2444456787766679999999997654
No 249
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.64 E-value=3.1e-05 Score=79.86 Aligned_cols=34 Identities=35% Similarity=0.551 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.++||+|||||++|+++|..|++.|++|+|||++
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAAFGKRVALIESK 36 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred ccCcEEEECCCHHHHHHHHHHHhCCCcEEEEcCC
Confidence 3589999999999999999999999999999997
No 250
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.63 E-value=0.00017 Score=71.92 Aligned_cols=92 Identities=23% Similarity=0.345 Sum_probs=69.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||+.|+-+|..|++.|.+|+|+|+.+...+ ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~--------~~--------------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGAMFLG--------LD--------------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHHTTCEEEEECSSSCCTT--------CC---------------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCEEEEEeCCCeecc--------CC---------------------------------
Confidence 5799999999999999999999999999999753210 00
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
..+.+.+.+.+++. |++++.++ ++++. .+ +|+ .++|+ +.+|.||.|.|...+.
T Consensus 183 ---~~~~~~l~~~l~~~-gV~i~~~~~v~~i~--~~---~v~--~~~g~---i~~D~vi~a~G~~p~~ 236 (367)
T 1xhc_A 183 ---EELSNMIKDMLEET-GVKFFLNSELLEAN--EE---GVL--TNSGF---IEGKVKICAIGIVPNV 236 (367)
T ss_dssp ---HHHHHHHHHHHHHT-TEEEECSCCEEEEC--SS---EEE--ETTEE---EECSCEEEECCEEECC
T ss_pred ---HHHHHHHHHHHHHC-CCEEEcCCEEEEEE--ee---EEE--ECCCE---EEcCEEEECcCCCcCH
Confidence 12455666666676 89999997 88886 23 233 35664 5699999999987654
No 251
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.61 E-value=2.9e-05 Score=79.79 Aligned_cols=33 Identities=27% Similarity=0.413 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
++||+|||||++|+++|..|++.|.+|+|||++
T Consensus 4 ~~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~~ 36 (450)
T 1ges_A 4 HYDYIAIGGGSGGIASINRAAMYGQKCALIEAK 36 (450)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCCeEEEEcCC
Confidence 589999999999999999999999999999997
No 252
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.61 E-value=0.00029 Score=72.37 Aligned_cols=141 Identities=16% Similarity=0.183 Sum_probs=77.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCCCCCCcc-cchhhhccccccceEEEEECCceeeeeccCcCCCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDVTEPDRI-VDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADV 130 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~~~~~r~-~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 130 (502)
..+|+|||||.+|+-+|..|++. |.+|++++|.+...+.- .....++.......+ +..-.......+- ... ..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~~~~~~~Vt~v~r~~~~~p~~~~~~~~~~~~p~~~~~-~~~l~~~~~~~~~-~~~-~~- 302 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLNDSYPSVQADMILRASALKPADDSPFVNEVFAPKFTDL-IYSREHAERERLL-REY-HN- 302 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTEEEEEECSSSSCCBCCCCHHHHGGGSHHHHHH-HHHSCHHHHHHHH-HHT-GG-
T ss_pred CCeEEEECCCHhHHHHHHHHHhcCCCCeEEEEEeCCCCcCccCCccchhccChhHHHH-HhcCCHHHHHHHH-HHh-hc-
Confidence 45899999999999999999998 99999999986432110 000000000000000 0000000000000 000 00
Q ss_pred cceeecch-----HHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcEEEEecCEEEEecCCCc
Q 010765 131 SGRSFHNG-----RFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 131 ~g~~i~r~-----~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~~~v~ad~vI~ADG~~S 199 (502)
..+...+. .......+.+....+++++.++ |+++..+++.+ .+.+.+. +|+..++.+|.||.|.|...
T Consensus 303 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~-~v~~~~~~~g~~~~~~~D~Vv~AtG~~p 377 (463)
T 3s5w_A 303 TNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGI-ELALRDAGSGELSVETYDAVILATGYER 377 (463)
T ss_dssp GTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEE-EEEEEETTTCCEEEEEESEEEECCCEEC
T ss_pred cCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEE-EEEEEEcCCCCeEEEECCEEEEeeCCCC
Confidence 00111111 2233334445554589999998 88888777654 3555543 78777788999999999653
No 253
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.60 E-value=0.00019 Score=73.90 Aligned_cols=98 Identities=15% Similarity=0.226 Sum_probs=73.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.|.+|+++|+.+.... .+
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~~Vt~v~~~~~~l~-------~~--------------------------------- 209 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGVKTTLIYRGKEILS-------RF--------------------------------- 209 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSST-------TS---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCeEEEEEcCCcccc-------cc---------------------------------
Confidence 45899999999999999999999999999999753110 00
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEE-eCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYK-TKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~-~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.|.+.+++. |++++.++ ++++..++++. +.+. .++|+ +.+|.||.|.|....
T Consensus 210 ---~~~~~~~l~~~l~~~-Gv~i~~~~~v~~i~~~~~~~--~~v~~~~~g~---i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 210 ---DQDMRRGLHAAMEEK-GIRILCEDIIQSVSADADGR--RVATTMKHGE---IVADQVMLALGRMPN 269 (463)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEECSCCEEEEEECTTSC--EEEEESSSCE---EEESEEEECSCEEES
T ss_pred ---CHHHHHHHHHHHHHC-CCEEECCCEEEEEEEcCCCE--EEEEEcCCCe---EEeCEEEEeeCcccC
Confidence 013456666777776 89999987 99998765542 3345 66775 569999999997654
No 254
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.60 E-value=5.5e-05 Score=82.06 Aligned_cols=38 Identities=34% Similarity=0.441 Sum_probs=34.5
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
...+||+|||||++|+++|..|+++|++|+|+|+....
T Consensus 389 ~~~~~VvIIGgG~AGl~aA~~La~~G~~V~liE~~~~~ 426 (690)
T 3k30_A 389 ESDARVLVVGAGPSGLEAARALGVRGYDVVLAEAGRDL 426 (690)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSS
T ss_pred cccceEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 45689999999999999999999999999999998543
No 255
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=97.57 E-value=5e-05 Score=78.45 Aligned_cols=39 Identities=28% Similarity=0.416 Sum_probs=33.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~~~~ 91 (502)
.++||+|||||++||++|+.|++.|+ +|+|+|++....+
T Consensus 3 ~~~~~~iiG~G~~g~~~a~~l~~~g~~~v~~~e~~~~~gg 42 (472)
T 1b37_A 3 VGPRVIVVGAGMSGISAAKRLSEAGITDLLILEATDHIGG 42 (472)
T ss_dssp --CCEEEECCBHHHHHHHHHHHHTTCCCEEEECSSSSSBT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCCCceEEEeCCCCCCC
Confidence 35799999999999999999999999 8999999866544
No 256
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.55 E-value=4.2e-05 Score=78.81 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.++||+|||||++|+++|..|++.|.+|+|+|+.
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCCEEEEEccC
Confidence 4589999999999999999999999999999994
No 257
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=97.55 E-value=5e-05 Score=83.01 Aligned_cols=39 Identities=38% Similarity=0.438 Sum_probs=35.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~ 91 (502)
..+||+|||||++|+++|..|++.|++|+|+|++.....
T Consensus 335 ~~~~v~viG~G~~Gl~aA~~l~~~g~~v~v~E~~~~~gg 373 (776)
T 4gut_A 335 HNKSVIIIGAGPAGLAAARQLHNFGIKVTVLEAKDRIGG 373 (776)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSSSCT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCCcEEEEecccceec
Confidence 468999999999999999999999999999999866554
No 258
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.54 E-value=5.3e-05 Score=79.87 Aligned_cols=58 Identities=21% Similarity=0.326 Sum_probs=43.8
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeC-CCcE--EEE-ecCEEEEecCCCc
Q 010765 142 QRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTK-DGQE--LRA-YAPLTIVCDGCFS 199 (502)
Q Consensus 142 ~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~-~G~~--~~v-~ad~vI~ADG~~S 199 (502)
..+.+.+.+.+|++++.++ |+++..+++++.+|++... +|+. .++ .++-||.|.|+..
T Consensus 199 ~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~gV~~~~~~~g~~~~~~v~~~~~VIlaaG~~~ 261 (546)
T 1kdg_A 199 ATYLQTALARPNFTFKTNVMVSNVVRNGSQILGVQTNDPTLGPNGFIPVTPKGRVILSAGAFG 261 (546)
T ss_dssp HTHHHHHHTCTTEEEECSCCEEEEEEETTEEEEEEESCTTSSGGGEEEEEEEEEEEECSHHHH
T ss_pred HHHHHHHhhCCCcEEEeCCEEEEEEEeCCEEEEEEEEecCCCceeEEEEEeCCEEEEcCChhc
Confidence 3455666666799999998 9999988888889987653 4652 223 6899999999864
No 259
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.51 E-value=0.0006 Score=67.52 Aligned_cols=105 Identities=16% Similarity=0.198 Sum_probs=69.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
.+|+|||+|.+|+-+|..|++.|.+|+++|+.+....+ ..+ .. ..
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~~g~~V~lv~~~~~~~~~------~~d-----------~~-----------~~------- 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAKNGSDIALYTSTTGLNDP------DAD-----------PS-----------VR------- 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTCEEEEECC---------------------------CT-----------TS-------
T ss_pred CEEEEECCCcCHHHHHHHHHhcCCeEEEEecCCCCCCC------CCC-----------CC-----------cc-------
Confidence 47999999999999999999999999999997431100 000 00 00
Q ss_pred ecchHHHHHHHHHHHcCCC-eEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 135 FHNGRFIQRMREKAASLPN-VRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~-v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
-...+.+.+.+.+++. + ++++.++ +.++..+++. +.+...+|+.. ..+|.+|.|.|....
T Consensus 212 -~~~~~~~~l~~~l~~~-g~v~~~~~~~v~~i~~~~~~---~~v~~~~g~~~-~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 212 -LSPYTRQRLGNVIKQG-ARIEMNVHYTVKDIDFNNGQ---YHISFDSGQSV-HTPHEPILATGFDAT 273 (369)
T ss_dssp -CCHHHHHHHHHHHHTT-CCEEEECSCCEEEEEEETTE---EEEEESSSCCE-EESSCCEECCCBCGG
T ss_pred -CCHHHHHHHHHHHhhC-CcEEEecCcEEEEEEecCCc---eEEEecCCeEe-ccCCceEEeeccCCc
Confidence 0122445566666665 5 9999987 8888766653 33455777653 246999999997654
No 260
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.49 E-value=0.00035 Score=74.30 Aligned_cols=97 Identities=21% Similarity=0.295 Sum_probs=72.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||||..|+-+|..|++.|.+|+++|+.+...+. +
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~--------------------------------- 226 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGIEVTLVEMANQVMPP-------I--------------------------------- 226 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------S---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEecCCccccc-------C---------------------------------
Confidence 357999999999999999999999999999987531110 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
...+.+.+.+.+++. |++++.++ ++++..+++. |. ..+|++ +.+|.||.|.|.....
T Consensus 227 ---~~~~~~~l~~~l~~~-GV~i~~~~~v~~i~~~~~~---v~--~~~g~~--i~~D~Vi~a~G~~p~~ 284 (588)
T 3ics_A 227 ---DYEMAAYVHEHMKNH-DVELVFEDGVDALEENGAV---VR--LKSGSV--IQTDMLILAIGVQPES 284 (588)
T ss_dssp ---CHHHHHHHHHHHHHT-TCEEECSCCEEEEEGGGTE---EE--ETTSCE--EECSEEEECSCEEECC
T ss_pred ---CHHHHHHHHHHHHHc-CCEEEECCeEEEEecCCCE---EE--ECCCCE--EEcCEEEEccCCCCCh
Confidence 012455666666666 89999987 8888765553 33 467764 5599999999987653
No 261
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.49 E-value=0.00032 Score=68.70 Aligned_cols=96 Identities=19% Similarity=0.247 Sum_probs=67.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-+|+|||+|..|+-+|..|++.|.+|++++|.+... . .
T Consensus 155 ~~~v~ViG~G~~g~e~a~~l~~~g~~V~l~~~~~~~~-----------~-----------~------------------- 193 (335)
T 2a87_A 155 DQDIAVIGGGDSAMEEATFLTRFARSVTLVHRRDEFR-----------A-----------S------------------- 193 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTCSEEEEECSSSSCS-----------S-----------C-------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCeEEEEEcCCcCC-----------c-----------c-------------------
Confidence 4689999999999999999999999999999874210 0 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
..+.+.+ +++. |++++.++ ++++..++ ++.+|.+.+ .+|+..++.+|.||.|.|...
T Consensus 194 ----~~~~~~~---~~~~-gV~v~~~~~v~~i~~~~-~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 194 ----KIMLDRA---RNND-KIRFLTNHTVVAVDGDT-TVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp ----TTHHHHH---HHCT-TEEEECSEEEEEEECSS-SCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred ----HHHHHHH---hccC-CcEEEeCceeEEEecCC-cEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 0012111 2333 89999987 88887654 333466654 356555678999999999643
No 262
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.49 E-value=8.5e-05 Score=80.14 Aligned_cols=40 Identities=33% Similarity=0.405 Sum_probs=35.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~ 91 (502)
....||+|||||++||++|..|++.|++|+|+|++....+
T Consensus 105 ~~~~~v~viG~G~~gl~~a~~l~~~g~~v~~~e~~~~~gg 144 (662)
T 2z3y_A 105 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGG 144 (662)
T ss_dssp SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSSSSBT
T ss_pred cCCCeEEEECcCHHHHHHHHHHHHCCCeEEEEecCCCCCC
Confidence 4467999999999999999999999999999999866544
No 263
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.47 E-value=9.4e-05 Score=81.49 Aligned_cols=41 Identities=34% Similarity=0.434 Sum_probs=36.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCc
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDR 92 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r 92 (502)
....+|+|||||++||++|+.|+++|++|+|+|++....++
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~~g~~v~v~E~~~~~GG~ 316 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARDRVGGR 316 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCCcEEEEEecCcCCCc
Confidence 34679999999999999999999999999999998765543
No 264
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.47 E-value=0.0001 Score=80.40 Aligned_cols=38 Identities=32% Similarity=0.464 Sum_probs=34.4
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
....||+||||||+|+++|..|++.|++|+|+|+.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~~Vtlie~~~~~ 424 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEKI 424 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSST
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 44679999999999999999999999999999998643
No 265
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.45 E-value=0.00069 Score=65.86 Aligned_cols=95 Identities=20% Similarity=0.146 Sum_probs=69.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|..|+-+|..|++.|.+|+++++.+....
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~~v~~~~~~~~~~~------------------------------------------ 191 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAKEVSIIHRRDKFRA------------------------------------------ 191 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBSEEEEECSSSSCSS------------------------------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCCeEEEEEecCcCCc------------------------------------------
Confidence 45799999999999999999999999999998743100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCCc
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~S 199 (502)
.... .+.+++. |++++.++ +.++..+++ +.+|.+.+ .+|+..++.+|.||.|.|...
T Consensus 192 ---~~~~----~~~l~~~-gv~~~~~~~v~~i~~~~~-~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 192 ---HEHS----VENLHAS-KVNVLTPFVPAELIGEDK-IEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp ---CHHH----HHHHHHS-SCEEETTEEEEEEECSSS-CCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred ---cHHH----HHHHhcC-CeEEEeCceeeEEecCCc-eEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 0001 1223444 89999987 888877655 44576666 456666788999999999643
No 266
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.44 E-value=0.00057 Score=70.37 Aligned_cols=101 Identities=21% Similarity=0.340 Sum_probs=71.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.-.|+|||||+.|+-+|..|++.|.+|+++|+.+..... .
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~~Vtlv~~~~~~l~~-------~--------------------------------- 211 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGVQTHIIEMLDRALIT-------L--------------------------------- 211 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSSSCTT-------S---------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCEEEEEEeCCcCCCC-------C---------------------------------
Confidence 457999999999999999999999999999997532110 0
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeCCCcEEEEecCEEEEecCCCchh
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTKDGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~-~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~v 201 (502)
....+.+.+.+.++ ++++.++ ++++..++ +.+. +.+...+|+..++.+|.||.|.|.....
T Consensus 212 --~d~~~~~~l~~~l~----v~i~~~~~v~~i~~~~~~~v~-v~~~~~~G~~~~i~~D~vi~a~G~~p~~ 274 (466)
T 3l8k_A 212 --EDQDIVNTLLSILK----LNIKFNSPVTEVKKIKDDEYE-VIYSTKDGSKKSIFTNSVVLAAGRRPVI 274 (466)
T ss_dssp --CCHHHHHHHHHHHC----CCEECSCCEEEEEEEETTEEE-EEECCTTSCCEEEEESCEEECCCEEECC
T ss_pred --CCHHHHHHHHhcCE----EEEEECCEEEEEEEcCCCcEE-EEEEecCCceEEEEcCEEEECcCCCccc
Confidence 00123444554442 8888887 99998766 6432 3332226775567899999999987554
No 267
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.44 E-value=0.0018 Score=62.37 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=66.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||||..|+-+|..|++.|.+|+|+||.......
T Consensus 152 ~~~vvViGgG~ig~e~A~~l~~~G~~Vt~v~~~~~~~~~----------------------------------------- 190 (314)
T 4a5l_A 152 NKVLMVVGGGDAAMEEALHLTKYGSKVIILHRRDAFRAS----------------------------------------- 190 (314)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSSEEEEECSSSSCCSC-----------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHHhCCeeeeeccccccccc-----------------------------------------
Confidence 357999999999999999999999999999986431100
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
. .+........+...+... +..+...++...++.+.. ..++..++.+|.|+.|-|..
T Consensus 191 -------~-~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~d~vi~a~G~~ 249 (314)
T 4a5l_A 191 -------K-TMQERVLNHPKIEVIWNSELVELEGDGDLLNGAKIHNLVSGEYKVVPVAGLFYAIGHS 249 (314)
T ss_dssp -------H-HHHHHHHTCTTEEEECSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEE
T ss_pred -------c-hhhhhhhcccceeeEeeeeeEEEEeeeeccceeEEeecccccceeeccccceEecccc
Confidence 0 111122223366666665 667766655556676665 34555667899999999854
No 268
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=97.39 E-value=0.00014 Score=78.53 Aligned_cols=38 Identities=26% Similarity=0.393 Sum_probs=34.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
...+||+|||||++|+++|..|++.|++|+|+|+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCCeEEEEeCCCCC
Confidence 34689999999999999999999999999999998543
No 269
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.37 E-value=5.9e-05 Score=79.25 Aligned_cols=37 Identities=38% Similarity=0.552 Sum_probs=33.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
..++|+||||||.+|+.+|..|++ |.+|+|+|+....
T Consensus 24 ~~~yD~IIVGsG~AG~v~A~rLse-g~~VlvLEaG~~~ 60 (536)
T 1ju2_A 24 EGSYDYVIVGGGTSGCPLAATLSE-KYKVLVLERGSLP 60 (536)
T ss_dssp EEEEEEEEECCSTTHHHHHHHHTT-TSCEEEECSSBCG
T ss_pred cCcccEEEECccHHHHHHHHHHhc-CCcEEEEecCCCc
Confidence 456999999999999999999999 9999999998653
No 270
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.33 E-value=0.00012 Score=75.26 Aligned_cols=36 Identities=31% Similarity=0.285 Sum_probs=32.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhh-C------CCeEEEEecCCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGK-D------GRRVHVIERDVTE 89 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~-~------G~~v~lvEr~~~~ 89 (502)
.+||+||||||+|+++|..|++ . |++|+|||+.+.+
T Consensus 3 ~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~ 45 (456)
T 1lqt_A 3 PYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP 45 (456)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC
T ss_pred CCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC
Confidence 4799999999999999999999 7 9999999998643
No 271
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.29 E-value=0.00067 Score=69.24 Aligned_cols=94 Identities=17% Similarity=0.203 Sum_probs=66.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||||+.|+-+|..|++.|.+|+|+|+.+.... ..+
T Consensus 147 ~~~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~~ll~-------~~d-------------------------------- 187 (437)
T 4eqs_A 147 VDKVLVVGAGYVSLEVLENLYERGLHPTLIHRSDKINK-------LMD-------------------------------- 187 (437)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSCCST-------TSC--------------------------------
T ss_pred CcEEEEECCccchhhhHHHHHhcCCcceeeeeeccccc-------ccc--------------------------------
Confidence 34799999999999999999999999999999753211 000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
..+.+.+.+.+++. |++++.++ ++++.. +. +..++|++. .+|+||.|-|....
T Consensus 188 ----~~~~~~~~~~l~~~-gV~i~~~~~v~~~~~--~~-----v~~~~g~~~--~~D~vl~a~G~~Pn 241 (437)
T 4eqs_A 188 ----ADMNQPILDELDKR-EIPYRLNEEINAING--NE-----ITFKSGKVE--HYDMIIEGVGTHPN 241 (437)
T ss_dssp ----GGGGHHHHHHHHHT-TCCEEESCCEEEEET--TE-----EEETTSCEE--ECSEEEECCCEEES
T ss_pred ----chhHHHHHHHhhcc-ceEEEeccEEEEecC--Ce-----eeecCCeEE--eeeeEEEEeceecC
Confidence 01233445555555 89999988 776642 32 235678764 59999999997543
No 272
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.25 E-value=0.0016 Score=66.85 Aligned_cols=138 Identities=15% Similarity=0.134 Sum_probs=76.7
Q ss_pred CCcEEEECCCHHHHHHHHHHh--------------------hCCC-eEEEEecCCCCCCccc-chhhhccccccceEEEE
Q 010765 54 PTDVIIVGAGVAGAALAHTLG--------------------KDGR-RVHVIERDVTEPDRIV-DCVEEIDAQQVLGYALF 111 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La--------------------~~G~-~v~lvEr~~~~~~r~~-~~l~~l~~~~~~g~~~~ 111 (502)
.-.|+|||+|..|+-+|..|+ +.|. +|+|++|+........ .-++++... .+....
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~~g~~~V~lv~r~~~~~~~ft~~el~~l~~l--p~~~~~ 222 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQSRVKTVWIVGRRGPLQVAFTIKELREMIQL--PGTRPM 222 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHTCCCCEEEEECSSCGGGCCCCHHHHHHHHTC--TTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhhCCCcEEEEEEcCChHhhccCHHHHHHhhcC--CCceeE
Confidence 468999999999999999999 6788 7999999853211111 111111110 111111
Q ss_pred ECCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHc--------------CCCeEEEece-EEEEEeeC-C-eEEEE
Q 010765 112 KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAAS--------------LPNVRLEQGT-VTSLLEEN-G-TIKGV 174 (502)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~--------------~~~v~i~~~~-v~~~~~~~-~-~v~~v 174 (502)
.+... +......... .+. .+.++.+.|.+.+.+ . ++++++++ ++++..++ + .+.+|
T Consensus 223 ~~~~~--~~~~~~~~~~--~~~--~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-gv~~~~~~~~~~i~~~~~~~~v~~v 295 (460)
T 1cjc_A 223 LDPAD--FLGLQDRIKE--AAR--PRKRLMELLLRTATEKPGVEEAARRASASR-AWGLRFFRSPQQVLPSPDGRRAAGI 295 (460)
T ss_dssp CCGGG--GTTHHHHTTT--SCH--HHHHHHHHHHHHHHSCCCHHHHHHHHTCSE-EEEEECSEEEEEEEECTTSSSEEEE
T ss_pred echhh--hcchhhhhhh--ccH--HHHHHHHHHHHHHHhccccccccCCCCCCc-eEEEECCCChheEEcCCCCceEEEE
Confidence 00000 0000000000 000 122345555555554 4 79999998 88887653 4 56666
Q ss_pred EEEeC-------------CCcEEEEecCEEEEecCCCch
Q 010765 175 QYKTK-------------DGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 175 ~~~~~-------------~G~~~~v~ad~vI~ADG~~S~ 200 (502)
++... +|+..++.+|+||-|-|..+.
T Consensus 296 ~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p~ 334 (460)
T 1cjc_A 296 RLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKSR 334 (460)
T ss_dssp EEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEECC
T ss_pred EEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCCC
Confidence 65421 455456789999999997653
No 273
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.21 E-value=0.00024 Score=80.44 Aligned_cols=35 Identities=23% Similarity=0.399 Sum_probs=32.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
.+||+||||||+|+++|..|++.|+ +|+|||+...
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~ 222 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEY 222 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCC
Confidence 5799999999999999999999999 7999999754
No 274
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=97.21 E-value=0.0018 Score=66.18 Aligned_cols=96 Identities=24% Similarity=0.352 Sum_probs=68.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||..|+-+|..|++.|.+|+++|+.+....+. +
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~~g~~Vtlv~~~~~~l~~~------~---------------------------------- 188 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAAQGKNVTMIVRGERVLRRS------F---------------------------------- 188 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSSTTTTT------S----------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhh------c----------------------------------
Confidence 489999999999999999999999999999975321100 0
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. ++++.++ +.++..++ ++..+ ..+|+ ++.+|.||.|.|....
T Consensus 189 --~~~~~~~l~~~l~~~--v~i~~~~~v~~i~~~~-~v~~v---~~~g~--~i~~D~Vv~a~G~~p~ 245 (449)
T 3kd9_A 189 --DKEVTDILEEKLKKH--VNLRLQEITMKIEGEE-RVEKV---VTDAG--EYKAELVILATGIKPN 245 (449)
T ss_dssp --CHHHHHHHHHHHTTT--SEEEESCCEEEEECSS-SCCEE---EETTE--EEECSEEEECSCEEEC
T ss_pred --CHHHHHHHHHHHHhC--cEEEeCCeEEEEeccC-cEEEE---EeCCC--EEECCEEEEeeCCccC
Confidence 023556666666665 8998887 88886554 33222 23454 3569999999997643
No 275
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.21 E-value=0.00022 Score=73.30 Aligned_cols=37 Identities=27% Similarity=0.409 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCC--CeEEEEecCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDG--RRVHVIERDVTE 89 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~~~ 89 (502)
..+||+||||||+|+.+|..|++.| ++|+|||+.+..
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~~~~~ 43 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLVP 43 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSSS
T ss_pred CCceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeCCCcC
Confidence 3579999999999999999999998 999999998643
No 276
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.19 E-value=0.0011 Score=68.83 Aligned_cols=96 Identities=17% Similarity=0.195 Sum_probs=66.3
Q ss_pred cEEEECCCHHHHHHHHHHhhC--------------CCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeec
Q 010765 56 DVIIVGAGVAGAALAHTLGKD--------------GRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSY 121 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~--------------G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~ 121 (502)
.++|||||++|+-+|..|+.. ..+|+|+|+.+... ..+
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~~~~~~l~~~~~~~~~~~~V~lve~~~~il-------~~~--------------------- 270 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQDYVHQDLRKFLPALAEEVQIHLVEALPIVL-------NMF--------------------- 270 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHTHHHHCHHHHHHCEEEEECSSSSSS-------TTS---------------------
T ss_pred ceEEECCCcchhhhHHHHHHHHHHHHHhhcccccccceeEEeccccccc-------cCC---------------------
Confidence 599999999999999988753 36788888875311 000
Q ss_pred cCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcE--EEEecCEEEEecCCC
Q 010765 122 PLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQE--LRAYAPLTIVCDGCF 198 (502)
Q Consensus 122 ~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~--~~v~ad~vI~ADG~~ 198 (502)
...+.+.+.+.+++. ||+++.++ |++++. +.+ .+....++|+. .++.+|+||-|.|..
T Consensus 271 ---------------~~~~~~~~~~~L~~~-GV~v~~~~~v~~v~~--~~~-~~~~~~~dg~~~~~~i~ad~viwa~Gv~ 331 (502)
T 4g6h_A 271 ---------------EKKLSSYAQSHLENT-SIKVHLRTAVAKVEE--KQL-LAKTKHEDGKITEETIPYGTLIWATGNK 331 (502)
T ss_dssp ---------------CHHHHHHHHHHHHHT-TCEEETTEEEEEECS--SEE-EEEEECTTSCEEEEEEECSEEEECCCEE
T ss_pred ---------------CHHHHHHHHHHHHhc-ceeeecCceEEEEeC--Cce-EEEEEecCcccceeeeccCEEEEccCCc
Confidence 013455666667777 89999998 887753 322 23344566653 457899999999964
No 277
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.11 E-value=0.00027 Score=73.65 Aligned_cols=57 Identities=16% Similarity=0.180 Sum_probs=43.9
Q ss_pred HHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEecCEEEEecCCCch
Q 010765 144 MREKAASLPNVRLEQGT-VTSLLEEN-G-TIKGVQYKTKDG---QELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 144 L~~~a~~~~~v~i~~~~-v~~~~~~~-~-~v~~v~~~~~~G---~~~~v~ad~vI~ADG~~S~ 200 (502)
+.+.+.+.++++++.++ |+++..++ + ++++|++.+.+| +..+++|+-||.|.|+...
T Consensus 227 ~l~~a~~~~n~~i~~~~~V~~i~~~~~g~~~~gV~~~~~~g~~~~~~~v~A~~VIlaaG~~~s 289 (504)
T 1n4w_A 227 YLAAALGTGKVTIQTLHQVKTIRQTKDGGYALTVEQKDTDGKLLATKEISCRYLFLGAGSLGS 289 (504)
T ss_dssp HHHHHHHTTSEEEEESEEEEEEEECTTSSEEEEEEEECTTCCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCccceeEEEeeCEEEEccCCCCC
Confidence 34455566689999998 99998774 3 788998876667 5567889999999998744
No 278
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.08 E-value=0.0079 Score=57.95 Aligned_cols=33 Identities=18% Similarity=0.327 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
-+|+|||||..|+-+|..|++.|.+|+|+||.+
T Consensus 146 k~vvViGgG~ig~E~A~~l~~~g~~Vtlv~~~~ 178 (312)
T 4gcm_A 146 KRLFVIGGGDSAVEEGTFLTKFADKVTIVHRRD 178 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHTTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCEEEEEeccc
Confidence 479999999999999999999999999999874
No 279
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.08 E-value=0.00039 Score=72.49 Aligned_cols=57 Identities=12% Similarity=0.081 Sum_probs=43.4
Q ss_pred HHHHHHcCCCeEEEece-EEEEEeeC-C-eEEEEEEEeCCC---cEEEEecCEEEEecCCCch
Q 010765 144 MREKAASLPNVRLEQGT-VTSLLEEN-G-TIKGVQYKTKDG---QELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 144 L~~~a~~~~~v~i~~~~-v~~~~~~~-~-~v~~v~~~~~~G---~~~~v~ad~vI~ADG~~S~ 200 (502)
+...+.+.++++++.++ |++++.++ + ++++|++...+| +..+++|+-||.|.|+...
T Consensus 232 ~l~~a~~~~n~~i~~~~~v~~i~~~~~g~~~~gV~~~~~~g~~~~~~~~~A~~VIlaaGa~~s 294 (507)
T 1coy_A 232 YLAQAAATGKLTITTLHRVTKVAPATGSGYSVTMEQIDEQGNVVATKVVTADRVFFAAGSVGT 294 (507)
T ss_dssp HHHHHHHTTCEEEECSEEEEEEEECSSSSEEEEEEEECTTSCEEEEEEEEEEEEEECSHHHHH
T ss_pred HHHHHHhcCCcEEEeCCEEEEEEECCCCCEEEEEEEeCCCCcccccEEEEeCEEEEccCccCC
Confidence 34445556689999998 99998775 4 688998876566 3567889999999998743
No 280
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.07 E-value=0.00038 Score=73.23 Aligned_cols=57 Identities=18% Similarity=0.169 Sum_probs=43.6
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeC-CeEEEEEEEeC-CCcEEEEecC-EEEEecCCC
Q 010765 142 QRMREKAASLPNVRLEQGT-VTSLLEEN-GTIKGVQYKTK-DGQELRAYAP-LTIVCDGCF 198 (502)
Q Consensus 142 ~~L~~~a~~~~~v~i~~~~-v~~~~~~~-~~v~~v~~~~~-~G~~~~v~ad-~vI~ADG~~ 198 (502)
..+...+.+.+|++++.++ |+++..++ +++.||++... +|+..+++|+ .||.|.|+.
T Consensus 212 ~a~l~~a~~~~~~~i~~~~~V~~i~~~~~~~~~GV~~~~~~~g~~~~i~A~k~VIlaaG~~ 272 (546)
T 2jbv_A 212 VSYIHPIVEQENFTLLTGLRARQLVFDADRRCTGVDIVDSAFGHTHRLTARNEVVLSTGAI 272 (546)
T ss_dssp HHHTGGGTTCTTEEEECSCEEEEEEECTTSBEEEEEEESSTTSCEEEEEEEEEEEECSHHH
T ss_pred HHHHHHHhcCCCcEEEeCCEEEEEEECCCCeEEEEEEEECCCCcEEEEEeCccEEEecCcc
Confidence 3344444445699999998 99998876 78889988653 2777788898 999999984
No 281
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.05 E-value=0.00022 Score=76.64 Aligned_cols=36 Identities=31% Similarity=0.390 Sum_probs=33.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC--------CeEEEEecCC-CC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDG--------RRVHVIERDV-TE 89 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G--------~~v~lvEr~~-~~ 89 (502)
..+|+|||||++||++|+.|++.| ++|+|+|++. ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGRLAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCcccccCCCceEEEEeccCccc
Confidence 468999999999999999999999 9999999986 44
No 282
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=97.05 E-value=0.002 Score=66.11 Aligned_cols=138 Identities=15% Similarity=0.124 Sum_probs=75.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC--------------------CC-eEEEEecCCCCCCccc-chhhhccccccceEEEE
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD--------------------GR-RVHVIERDVTEPDRIV-DCVEEIDAQQVLGYALF 111 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~--------------------G~-~v~lvEr~~~~~~r~~-~~l~~l~~~~~~g~~~~ 111 (502)
.-.|+|||+|.+|+-+|..|++. |. +|+|++|+........ .-++++... .+..+.
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~~f~~~elrel~~l--p~~~~~ 224 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLTDPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQAAFTTLELRELADL--DGVDVV 224 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHSCHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGCCCCHHHHHHGGGC--TTEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHHhhhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhhccChHHHHHhhcC--CCceee
Confidence 45799999999999999999874 65 9999999853221111 111222111 122211
Q ss_pred ECCceeeeeccCcCCCCCCcceeecchHHHHHHHHHHHcC-----CCeEEEece-EEEEEeeCCeEEEEEEEe-------
Q 010765 112 KDGKSTRLSYPLEKFHADVSGRSFHNGRFIQRMREKAASL-----PNVRLEQGT-VTSLLEENGTIKGVQYKT------- 178 (502)
Q Consensus 112 ~~g~~~~~~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~-----~~v~i~~~~-v~~~~~~~~~v~~v~~~~------- 178 (502)
.+... +. ...........-.+.++.+.|.+.+.+. .++++++++ ++++..+ +++.+|++..
T Consensus 225 ~~~~~--~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~-~~v~~v~~~~~~~~~~~ 298 (456)
T 1lqt_A 225 IDPAE--LD---GITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGK-RKVERIVLGRNELVSDG 298 (456)
T ss_dssp CCGGG--GT---TCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECS-SSCCEEEEEEEEEEECS
T ss_pred eChHH--hc---cchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecC-CcEeEEEEEEEEecCCC
Confidence 11000 00 0000000000001123345666666552 389999997 8888754 4444455542
Q ss_pred -------CCCcEEEEecCEEEEecCCCc
Q 010765 179 -------KDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 179 -------~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+|+..++.+|+||-|-|..+
T Consensus 299 ~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 299 SGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp SSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred cccccccCCCceEEEEcCEEEEcccccc
Confidence 245545678999999999654
No 283
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=97.03 E-value=0.00098 Score=74.90 Aligned_cols=94 Identities=18% Similarity=0.222 Sum_probs=71.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-.|+|||+|+.|+-+|..|++.|.+|+|+|+.+... .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~~G~~Vtvv~~~~~~~-------~------------------------------------ 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAATGGVVAVIDARSSIS-------A------------------------------------ 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGGGTCCSEEEESCSSCC-------H------------------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHHcCCcEEEEECCCccc-------h------------------------------------
Confidence 579999999999999999999999999999974310 0
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEee-CCeEEEEEEEe--C---CCcEEEEecCEEEEecCCCchh
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEE-NGTIKGVQYKT--K---DGQELRAYAPLTIVCDGCFSNL 201 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~-~~~v~~v~~~~--~---~G~~~~v~ad~vI~ADG~~S~v 201 (502)
. .+.+++. |++++.++ ++++..+ ++++.+|++.+ . +|+..++.+|.||.|.|.....
T Consensus 322 ----~-----~~~l~~~-GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~~ 385 (965)
T 2gag_A 322 ----A-----AAQAVAD-GVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPVV 385 (965)
T ss_dssp ----H-----HHHHHHT-TCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEECC
T ss_pred ----h-----HHHHHhC-CeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcCh
Confidence 0 2234444 89999998 8888764 56666777765 2 3544567899999999976543
No 284
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=96.96 E-value=0.00043 Score=69.46 Aligned_cols=85 Identities=16% Similarity=0.216 Sum_probs=62.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCccee
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGRS 134 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~~ 134 (502)
-+|+|||||..|+-+|..|++.|.+|+|+|+.+....+..
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~~g~~Vtvv~~~~~~l~~~~---------------------------------------- 186 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIIDSGTPASIGIILEYPLERQL---------------------------------------- 186 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTCCEEEECSSSSSCTTTS----------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCeEEEEEcCCccchhhc----------------------------------------
Confidence 4799999999999999999999999999999854221100
Q ss_pred ecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCch
Q 010765 135 FHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFSN 200 (502)
Q Consensus 135 i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S~ 200 (502)
...+.+.+.+.+++. |++++.++ +.++ |++ +.+|+||.|.|....
T Consensus 187 --~~~~~~~~~~~l~~~-gV~~~~~~~v~~i----------------g~~--~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 187 --DRDGGLFLKDKLDRL-GIKIYTNSNFEEM----------------GDL--IRSSCVITAVGVKPN 232 (385)
T ss_dssp --CHHHHHHHHHHHHTT-TCEEECSCCGGGC----------------HHH--HHHSEEEECCCEEEC
T ss_pred --CHHHHHHHHHHHHhC-CCEEEeCCEEEEc----------------CeE--EecCeEEECcCcccC
Confidence 012445566666666 89998876 4443 332 559999999998654
No 285
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=96.92 E-value=0.0018 Score=61.73 Aligned_cols=85 Identities=13% Similarity=0.050 Sum_probs=61.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
..+|+|||+|+.|+-+|..|++.| +|+++++.+..
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~~g-~v~~v~~~~~~-------------------------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPDWG-ETTFFTNGIVE-------------------------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGGTS-EEEEECTTTCC--------------------------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhhcC-cEEEEECCCCC--------------------------------------------
Confidence 458999999999999999999999 99999876320
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
+...+.+.+++. |++++...+.++..++ .+...+|++ +.+|.||.|.|..
T Consensus 176 ------~~~~~~~~l~~~-gv~i~~~~v~~i~~~~------~v~~~~g~~--~~~D~vi~a~G~~ 225 (297)
T 3fbs_A 176 ------PDADQHALLAAR-GVRVETTRIREIAGHA------DVVLADGRS--IALAGLFTQPKLR 225 (297)
T ss_dssp ------CCHHHHHHHHHT-TCEEECSCEEEEETTE------EEEETTSCE--EEESEEEECCEEE
T ss_pred ------CCHHHHHHHHHC-CcEEEcceeeeeecCC------eEEeCCCCE--EEEEEEEEccCcc
Confidence 011223344444 8999874588876432 234567775 4599999999964
No 286
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.85 E-value=0.0047 Score=69.85 Aligned_cols=96 Identities=21% Similarity=0.208 Sum_probs=67.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
-+|+|||||..|+-+|..|++.|. +|+|++|++... +...
T Consensus 333 ~~VvVIGgG~~g~e~A~~~~~~G~~~Vtvv~r~~~~~------~~~~--------------------------------- 373 (1025)
T 1gte_A 333 GAVIVLGAGDTAFDCATSALRCGARRVFLVFRKGFVN------IRAV--------------------------------- 373 (1025)
T ss_dssp SEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSCGGG------CCSC---------------------------------
T ss_pred CcEEEECCChHHHHHHHHHHHcCCCEEEEEEecChhh------CCCC---------------------------------
Confidence 389999999999999999999997 899999974200 0000
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe----CC-------CcEEEEecCEEEEecCCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT----KD-------GQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~----~~-------G~~~~v~ad~vI~ADG~~ 198 (502)
... .+.+++. |++++.++ +.++..+++++.+|++.. ++ |+..++.+|.||.|-|..
T Consensus 374 -------~~e-~~~~~~~-Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 374 -------PEE-VELAKEE-KCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp -------HHH-HHHHHHT-TCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred -------HHH-HHHHHHc-CCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 000 1233444 89998887 888877677777776542 23 334567899999999984
No 287
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.76 E-value=0.0021 Score=65.95 Aligned_cols=35 Identities=20% Similarity=0.319 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
..-+|+|||||.+|+-+|..+.+.|. +|++++|+.
T Consensus 263 ~gk~VvVIGgG~~a~d~A~~~~r~Ga~~Vtiv~r~~ 298 (456)
T 2vdc_G 263 AGKHVVVLGGGDTAMDCVRTAIRQGATSVKCLYRRD 298 (456)
T ss_dssp CCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCCEEEEECCChhHHHHHHHHHHcCCCEEEEEEeCC
Confidence 34589999999999999999999998 599999874
No 288
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=96.71 E-value=0.0046 Score=66.90 Aligned_cols=97 Identities=11% Similarity=0.119 Sum_probs=66.8
Q ss_pred CCcEEEEC--CCHHHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCc
Q 010765 54 PTDVIIVG--AGVAGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVS 131 (502)
Q Consensus 54 ~~dVvIVG--aG~aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 131 (502)
.-+|+||| +|..|+-+|..|++.|.+|+++++.+..... ...
T Consensus 523 g~~VvViG~ggG~~g~e~A~~L~~~g~~Vtlv~~~~~l~~~-------~~~----------------------------- 566 (690)
T 3k30_A 523 GKKVVVYDDDHYYLGGVVAELLAQKGYEVSIVTPGAQVSSW-------TNN----------------------------- 566 (690)
T ss_dssp SSEEEEEECSCSSHHHHHHHHHHHTTCEEEEEESSSSTTGG-------GGG-----------------------------
T ss_pred CCEEEEEcCCCCccHHHHHHHHHhCCCeeEEEecccccccc-------ccc-----------------------------
Confidence 34699999 9999999999999999999999987532110 000
Q ss_pred ceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEe-CCCcEEEEecCEEEEecCCC
Q 010765 132 GRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKT-KDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 132 g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~-~~G~~~~v~ad~vI~ADG~~ 198 (502)
..+...|.+.+++. |++++.++ |+++..+ . +.+.. .+++..++.+|.||.|.|..
T Consensus 567 ------~~~~~~l~~~l~~~-GV~i~~~~~V~~i~~~--~---~~v~~~~~~~~~~i~aD~VV~A~G~~ 623 (690)
T 3k30_A 567 ------TFEVNRIQRRLIEN-GVARVTDHAVVAVGAG--G---VTVRDTYASIERELECDAVVMVTARL 623 (690)
T ss_dssp ------GTCHHHHHHHHHHT-TCEEEESEEEEEEETT--E---EEEEETTTCCEEEEECSEEEEESCEE
T ss_pred ------chhHHHHHHHHHHC-CCEEEcCcEEEEEECC--e---EEEEEccCCeEEEEECCEEEECCCCC
Confidence 00133455556665 89999998 8888643 2 22332 23444567799999999964
No 289
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.63 E-value=0.0017 Score=68.84 Aligned_cols=39 Identities=26% Similarity=0.434 Sum_probs=36.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~ 91 (502)
.+|||+|||+|+.|+.+|..|++.|.+|+++||++.-++
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~~g~~vl~id~~~~~gg 45 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSRSGQRVLHVDSRSYYGG 45 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred CcCCEEEECCcHHHHHHHHHHHhCCCEEEEEcCCCcccC
Confidence 479999999999999999999999999999999977654
No 290
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=96.46 E-value=0.0032 Score=66.03 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 177 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 177 AGRRVGVIGTGSTGQQVITSLAPEVEHLTVFVRTPQ 212 (540)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTCSEEEEEESSCC
T ss_pred ccceEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 345899999999999999999999999999999865
No 291
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.39 E-value=0.014 Score=62.89 Aligned_cols=50 Identities=14% Similarity=0.183 Sum_probs=35.0
Q ss_pred HHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 143 RMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 143 ~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+.+.+++. |++++.++ ++++.. ++ +.+. .+|+..++.+|.||.|.|...
T Consensus 578 ~~~~~l~~~-GV~v~~~~~v~~i~~--~~---v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 578 IHRTTLLSR-GVKMIPGVSYQKIDD--DG---LHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp HHHHHHHHT-TCEEECSCEEEEEET--TE---EEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred HHHHHHHhc-CCEEEeCcEEEEEeC--Ce---EEEe-cCCeEEEEeCCEEEECCCccc
Confidence 445555565 89999997 877753 33 3343 567656788999999999654
No 292
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=96.24 E-value=0.015 Score=59.71 Aligned_cols=35 Identities=14% Similarity=0.192 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.-+|+|||+|.+|+-+|..|++.|.+|+|+++++.
T Consensus 197 ~k~VvVVG~G~sg~eiA~~l~~~g~~V~li~~~~~ 231 (464)
T 2xve_A 197 DKTVLLVGSSYSAEDIGSQCYKYGAKKLISCYRTA 231 (464)
T ss_dssp TSEEEEECCSTTHHHHHHHHHHTTCSEEEEECSSC
T ss_pred CCEEEEEcCCCCHHHHHHHHHHhCCeEEEEEECCC
Confidence 45799999999999999999999999999998753
No 293
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=96.09 E-value=0.0032 Score=66.09 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 184 ~~krV~VIG~G~tgve~a~~la~~~~~Vtv~~r~~~ 219 (545)
T 3uox_A 184 TGKRVGVIGTGATGVQIIPIAAETAKELYVFQRTPN 219 (545)
T ss_dssp BTCEEEEECCSHHHHHHHHHHTTTBSEEEEEESSCC
T ss_pred CCCeEEEECCCccHHHHHHHHHhhCCEEEEEEcCCC
Confidence 345899999999999999999999999999999865
No 294
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=96.04 E-value=0.021 Score=58.16 Aligned_cols=34 Identities=15% Similarity=0.160 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCe-EEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~-v~lvEr~~ 87 (502)
.-+|+|||+|.+|+-+|..|++.|.+ |+|++|.+
T Consensus 212 ~k~VvVvG~G~sg~e~A~~l~~~~~~~V~l~~r~~ 246 (447)
T 2gv8_A 212 GESVLVVGGASSANDLVRHLTPVAKHPIYQSLLGG 246 (447)
T ss_dssp TCCEEEECSSHHHHHHHHHHTTTSCSSEEEECTTC
T ss_pred CCEEEEEccCcCHHHHHHHHHHHhCCcEEEEeCCC
Confidence 45799999999999999999999999 99999974
No 295
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=96.03 E-value=0.007 Score=51.98 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 4579999999999999999999999999999975
No 296
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=95.91 E-value=0.0092 Score=50.29 Aligned_cols=34 Identities=26% Similarity=0.326 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+-.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~ 40 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDIPLVVIETSR 40 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCH
Confidence 4579999999999999999999999999999985
No 297
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.65 E-value=0.012 Score=49.07 Aligned_cols=33 Identities=33% Similarity=0.556 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 479999999999999999999999999999864
No 298
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.60 E-value=0.015 Score=49.73 Aligned_cols=34 Identities=21% Similarity=0.293 Sum_probs=31.3
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+-.|+|+|+|..|...|..|.+.|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCC
Confidence 3479999999999999999999999999999973
No 299
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=95.57 E-value=0.018 Score=62.59 Aligned_cols=34 Identities=21% Similarity=0.307 Sum_probs=31.4
Q ss_pred CCcEEEEC--CCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVG--AGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVG--aG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.-+|+||| ||..|+-+|..|++.|.+|+|+++.+
T Consensus 528 gk~VvVIG~GgG~~g~e~A~~l~~~G~~Vtlv~~~~ 563 (729)
T 1o94_A 528 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVH 563 (729)
T ss_dssp CSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHcCCEEEEEeccc
Confidence 35899998 99999999999999999999999974
No 300
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.56 E-value=0.013 Score=49.19 Aligned_cols=33 Identities=24% Similarity=0.548 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 479999999999999999999999999999974
No 301
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=95.34 E-value=0.016 Score=46.71 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC-CeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~ 87 (502)
..|+|+|+|..|..++..|.+.| ++|.+++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCH
Confidence 47999999999999999999999 8999999974
No 302
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.29 E-value=0.059 Score=54.64 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=59.8
Q ss_pred CcEEEECCCHHH----------HHHHHHHhhCCCe-----EEEEecCCCCCCcccchhhhccccccceEEEEECCceeee
Q 010765 55 TDVIIVGAGVAG----------AALAHTLGKDGRR-----VHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRL 119 (502)
Q Consensus 55 ~dVvIVGaG~aG----------l~~A~~La~~G~~-----v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~ 119 (502)
..++|||+|+.| +.+|..|++.|.+ |+++++.+...... +. +
T Consensus 150 ~~~vVVGgG~~~g~~G~~~E~a~~la~~l~~~g~~~~~~~Vtlv~~~~~~~~~~---l~--------~------------ 206 (437)
T 3sx6_A 150 PGPIVIGAMAGASCFGPAYEYAMIVASDLKKRGMRDKIPSFTFITSEPYIGHLG---IQ--------G------------ 206 (437)
T ss_dssp CCCEEEEECTTCCCCHHHHHHHHHHHHHHHHTTCGGGCSCEEEEESSSSTTCTT---TT--------C------------
T ss_pred CCEEEEEcCCCCCcCcHHHHHHHHHHHHHHHcCCcccCcEEEEEcCCccccccc---cC--------c------------
Confidence 357899997654 4455677788875 99999875321100 00 0
Q ss_pred eccCcCCCCCCcceeecchHHHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCc---EEEEecCEEEEec
Q 010765 120 SYPLEKFHADVSGRSFHNGRFIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQ---ELRAYAPLTIVCD 195 (502)
Q Consensus 120 ~~~~~~~~~~~~g~~i~r~~l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~---~~~v~ad~vI~AD 195 (502)
+ ......+.+.+++. ||+++.++ ++++.. +.+. +...+.+|+ ..++.+|++|.|.
T Consensus 207 ---------------~--~~~~~~~~~~l~~~-gI~~~~~~~v~~v~~--~~v~-~~~~~~~g~~~~~~~i~~D~vv~~~ 265 (437)
T 3sx6_A 207 ---------------V--GDSKGILTKGLKEE-GIEAYTNCKVTKVED--NKMY-VTQVDEKGETIKEMVLPVKFGMMIP 265 (437)
T ss_dssp ---------------C--TTHHHHHHHHHHHT-TCEEECSEEEEEEET--TEEE-EEEECTTSCEEEEEEEECSEEEEEC
T ss_pred ---------------c--hHHHHHHHHHHHHC-CCEEEcCCEEEEEEC--CeEE-EEecccCCccccceEEEEeEEEEcC
Confidence 0 01234455555666 89999998 888753 3322 222234553 3457899999998
Q ss_pred CC
Q 010765 196 GC 197 (502)
Q Consensus 196 G~ 197 (502)
|.
T Consensus 266 g~ 267 (437)
T 3sx6_A 266 AF 267 (437)
T ss_dssp CE
T ss_pred CC
Confidence 84
No 303
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=95.27 E-value=0.049 Score=55.05 Aligned_cols=52 Identities=15% Similarity=0.143 Sum_probs=35.7
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 141 IQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 141 ~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
...+.+.+++. ||+++.++ |++++. + ++.+.+.+++..++.+|++|.|.|..
T Consensus 203 ~~~l~~~l~~~-GV~i~~~~~v~~v~~--~---~v~~~~~~~~g~~i~~D~vv~a~G~~ 255 (430)
T 3h28_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP--D---KVIYEDLNGNTHEVPAKFTMFMPSFQ 255 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS--S---EEEEECTTSCEEEEECSEEEEECEEE
T ss_pred HHHHHHHHHHC-CCEEEeCCEEEEEeC--C---eEEEEecCCCceEEeeeEEEECCCCc
Confidence 44555666666 89999988 888754 3 24454444444567799999998864
No 304
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=95.19 E-value=0.04 Score=52.74 Aligned_cols=87 Identities=11% Similarity=0.135 Sum_probs=56.8
Q ss_pred CcEEEECCCH-HHHHHHHHHhhCCCeEEEEecCCCCCCcccchhhhccccccceEEEEECCceeeeeccCcCCCCCCcce
Q 010765 55 TDVIIVGAGV-AGAALAHTLGKDGRRVHVIERDVTEPDRIVDCVEEIDAQQVLGYALFKDGKSTRLSYPLEKFHADVSGR 133 (502)
Q Consensus 55 ~dVvIVGaG~-aGl~~A~~La~~G~~v~lvEr~~~~~~r~~~~l~~l~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 133 (502)
.+++|||||. +++.+|..+++.|.+|+++++....
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~~~~~v~i~~~~~~~-------------------------------------------- 182 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYNWSTDLVIATNGNEL-------------------------------------------- 182 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTTTCSCEEEECSSCCC--------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHhCCceEEEEeccccc--------------------------------------------
Confidence 4678888875 5678899999999999999875321
Q ss_pred eecchHHHHHHHHHHHcCCCeEEEeceEEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCC
Q 010765 134 SFHNGRFIQRMREKAASLPNVRLEQGTVTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGC 197 (502)
Q Consensus 134 ~i~r~~l~~~L~~~a~~~~~v~i~~~~v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~ 197 (502)
.+.+.+.+.+. ++.++.+++..+..+++.+.+| ..++|++. .+|.+|.+-|.
T Consensus 183 -------~~~~~~~l~~~-g~~~~~~~v~~~~~~~~~~~~v--~~~~g~~i--~~~~~vi~~g~ 234 (304)
T 4fk1_A 183 -------SQTIMDELSNK-NIPVITESIRTLQGEGGYLKKV--EFHSGLRI--ERAGGFIVPTF 234 (304)
T ss_dssp -------CHHHHHHHHTT-TCCEECSCEEEEESGGGCCCEE--EETTSCEE--CCCEEEECCEE
T ss_pred -------hhhhhhhhhcc-ceeEeeeeEEEeecCCCeeeee--ecccccee--eecceeeeecc
Confidence 01123334444 7888887777777666654444 45677754 46766655553
No 305
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=94.71 E-value=0.027 Score=47.05 Aligned_cols=33 Identities=18% Similarity=0.415 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 369999999999999999999999999999874
No 306
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.66 E-value=0.033 Score=49.04 Aligned_cols=34 Identities=26% Similarity=0.322 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhC-CCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKD-GRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~-G~~v~lvEr~~ 87 (502)
.-.|+|+|+|..|..+|..|.+. |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCH
Confidence 44799999999999999999999 99999999975
No 307
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.06 E-value=0.054 Score=51.96 Aligned_cols=33 Identities=24% Similarity=0.553 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 469999999999999999999999999999974
No 308
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=93.96 E-value=0.054 Score=52.79 Aligned_cols=35 Identities=14% Similarity=0.213 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
...+|.|||||-.|.++|..|++.|+ +|+|+|++.
T Consensus 8 ~~~kI~VIGaG~vG~~lA~~la~~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 8 RRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVK 43 (331)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCh
Confidence 34589999999999999999999998 999999974
No 309
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.96 E-value=0.042 Score=49.91 Aligned_cols=32 Identities=28% Similarity=0.372 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|+|+|+|..|..+|..|.+.|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHHTTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 59999999999999999999999999999875
No 310
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=93.72 E-value=0.19 Score=50.26 Aligned_cols=50 Identities=14% Similarity=0.170 Sum_probs=34.8
Q ss_pred HHHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 140 FIQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 140 l~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
+.+.+.+.+++. |++++.++ ++++..+ . | ..++|++ +.+|++|.|.|...
T Consensus 220 ~~~~~~~~l~~~-gV~~~~~~~v~~i~~~--~---v--~~~~g~~--~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQL-GIKLVHNFKIKEIREH--E---I--VDEKGNT--IPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHH-TCEEECSCCEEEECSS--E---E--EETTSCE--EECSEEEEECCEEC
T ss_pred HHHHHHHHHHHC-CCEEEcCCceEEECCC--e---E--EECCCCE--EeeeEEEECCCCCc
Confidence 445555556665 89999987 8888642 2 2 3567875 45999999998643
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.68 E-value=0.047 Score=52.74 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
-.|.|||||.-|..-|..++++|++|+|+|.++.
T Consensus 7 ~~VaViGaG~MG~giA~~~a~~G~~V~l~D~~~~ 40 (319)
T 3ado_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CeEEEECCcHHHHHHHHHHHhCCCeEEEEECCHH
Confidence 4799999999999999999999999999998753
No 312
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.64 E-value=0.064 Score=54.71 Aligned_cols=34 Identities=29% Similarity=0.361 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|.|||.|.+|+++|..|.++|++|.+.|++.
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~~~G~~V~~~D~~~ 42 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLAKLGAIVTVNDGKP 42 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHHHTTCEEEEEESSC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCEEEEEeCCc
Confidence 4589999999999999999999999999999975
No 313
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=93.52 E-value=0.079 Score=48.32 Aligned_cols=35 Identities=17% Similarity=0.312 Sum_probs=31.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
-....|+|||||.+|...|..|.+.|.+|+|+++.
T Consensus 29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~ 63 (223)
T 3dfz_A 29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPT 63 (223)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSS
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCC
Confidence 34568999999999999999999999999999875
No 314
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=93.38 E-value=0.072 Score=51.59 Aligned_cols=33 Identities=27% Similarity=0.554 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|-.|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~~ 35 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAKTGHCVSVVSRSD 35 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHHTTCEEEEECSTT
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEeCCh
Confidence 479999999999999999999999999999963
No 315
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=93.33 E-value=0.06 Score=54.70 Aligned_cols=36 Identities=25% Similarity=0.492 Sum_probs=32.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
..|+|||.|++|+++|..|+++|++|++.|.+...+
T Consensus 6 ~~v~viG~G~~G~~~a~~l~~~G~~v~~~D~~~~~~ 41 (439)
T 2x5o_A 6 KNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPP 41 (439)
T ss_dssp CCEEEECCHHHHHHHHHHHHTTTCCCEEEESSSSCT
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCEEEEEECCCCcc
Confidence 479999999999999999999999999999986543
No 316
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.25 E-value=0.089 Score=52.38 Aligned_cols=35 Identities=26% Similarity=0.372 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...|+|+|+|++|+.+|..|...|.+|+++|+++.
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 224 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPA 224 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTT
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 46899999999999999999999999999999853
No 317
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=93.24 E-value=0.092 Score=50.67 Aligned_cols=38 Identities=24% Similarity=0.312 Sum_probs=33.2
Q ss_pred CCCCCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 50 KNGSPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 50 ~~~~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
|.+....|.|||+|..|.++|..|++.|+ +|+++|+++
T Consensus 4 m~~~~~kv~ViGaG~vG~~ia~~l~~~g~~~v~l~D~~~ 42 (315)
T 3tl2_A 4 MTIKRKKVSVIGAGFTGATTAFLLAQKELADVVLVDIPQ 42 (315)
T ss_dssp CCCCCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCGG
T ss_pred cccCCCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeccc
Confidence 33445689999999999999999999999 999999873
No 318
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=93.01 E-value=0.064 Score=50.54 Aligned_cols=34 Identities=18% Similarity=0.418 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|||||.+|+..|..|.+.|.+|+|++.+.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 4589999999999999999999999999999864
No 319
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.95 E-value=0.1 Score=49.49 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAFHGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 479999999999999999999999999999875
No 320
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=92.93 E-value=0.074 Score=49.53 Aligned_cols=35 Identities=29% Similarity=0.475 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
...|+|||+|-.|..+|..|++.|+ +++|+|++.-
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v 66 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTV 66 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCc
Confidence 3589999999999999999999998 8999999853
No 321
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.81 E-value=0.11 Score=46.77 Aligned_cols=35 Identities=23% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...|.|||+|-.|.+.|..|++.|++|.+++|++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEIAGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHH
Confidence 45799999999999999999999999999998753
No 322
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.74 E-value=0.1 Score=49.33 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
+|.|||+|..|.+.|..|++.|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHhCCCCEEEEEcCcc
Confidence 589999999999999999999999999999753
No 323
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=92.70 E-value=0.11 Score=51.09 Aligned_cols=36 Identities=31% Similarity=0.462 Sum_probs=32.6
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+...+|.|||+|-.|.+.|..|++.|++|.+++|++
T Consensus 27 ~~~mkI~VIGaG~mG~alA~~La~~G~~V~l~~r~~ 62 (356)
T 3k96_A 27 PFKHPIAILGAGSWGTALALVLARKGQKVRLWSYES 62 (356)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHTTTCCEEEECSCH
T ss_pred ccCCeEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 344689999999999999999999999999999974
No 324
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=92.68 E-value=0.098 Score=53.66 Aligned_cols=34 Identities=24% Similarity=0.444 Sum_probs=31.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la~~G~~V~~~d~~~ 41 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLADIGHDVFCLDVDQ 41 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CceEEEECcCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 4689999999999999999999999999999874
No 325
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=92.64 E-value=0.11 Score=52.66 Aligned_cols=36 Identities=17% Similarity=0.411 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...++.|||.|..|+.+|..|++.|++|+++++++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSDFGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 357899999999999999999999999999999864
No 326
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=92.63 E-value=0.085 Score=50.86 Aligned_cols=32 Identities=34% Similarity=0.532 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.+|.|||+|-.|.+.|..|++.|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRSGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHTSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEEcC
Confidence 47999999999999999999999999999986
No 327
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=92.53 E-value=0.11 Score=50.03 Aligned_cols=33 Identities=24% Similarity=0.454 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
..|.|||+|-.|.++|..|++.|+ +|+++|++.
T Consensus 8 mkI~IiGaG~vG~~~a~~l~~~g~~~~V~l~d~~~ 42 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAK 42 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 479999999999999999999999 999999974
No 328
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.52 E-value=0.069 Score=54.55 Aligned_cols=34 Identities=29% Similarity=0.594 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|+|+|+|-.|..+|..|.+.|++|+|+|+++.
T Consensus 4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~ 37 (461)
T 4g65_A 4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGD 37 (461)
T ss_dssp EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 3699999999999999999999999999999853
No 329
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=92.50 E-value=0.065 Score=45.12 Aligned_cols=34 Identities=21% Similarity=0.423 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|||+|..|...|..|.+.|.+|.+++|++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~ 54 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNI 54 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 4589999999999999999999999999999874
No 330
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.48 E-value=0.12 Score=50.37 Aligned_cols=32 Identities=38% Similarity=0.621 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
.+|.|||+|-.|.+.|..|++.|++|++++|.
T Consensus 4 mkI~IiGaG~~G~~~a~~L~~~g~~V~~~~r~ 35 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLALAGEAINVLARG 35 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHHHTTCCEEEECCH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCEEEEEECh
Confidence 47999999999999999999999999999985
No 331
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=92.46 E-value=0.1 Score=52.37 Aligned_cols=34 Identities=29% Similarity=0.401 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
-.|+|+|.|..|..+|..|.+.|++|+++|+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHH
Confidence 4799999999999999999999999999999853
No 332
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=92.36 E-value=0.1 Score=51.43 Aligned_cols=36 Identities=22% Similarity=0.367 Sum_probs=32.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
....|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~ 218 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPE 218 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGG
T ss_pred CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 346899999999999999999999999999999853
No 333
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.27 E-value=0.15 Score=49.58 Aligned_cols=33 Identities=27% Similarity=0.417 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
..|.|||||-.|.++|..|++.|+ +|.++|++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la~~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLGQKDLGDVYMFDIIE 48 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSST
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCH
Confidence 489999999999999999999999 999999974
No 334
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=92.22 E-value=0.12 Score=49.93 Aligned_cols=34 Identities=32% Similarity=0.555 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 7 ~kI~vIGaG~MG~~iA~~la~~G~~V~l~d~~~~ 40 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFASGGFRVKLYDIEPR 40 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred ceEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 4799999999999999999999999999999853
No 335
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=92.06 E-value=0.16 Score=49.32 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHH-HHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAA-LAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~-~A~~La~~G~~v~lvEr~~~ 88 (502)
..|.|||.|.+|++ +|..|.++|++|.+.|++..
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~~G~~V~~~D~~~~ 39 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKEAGFEVSGCDAKMY 39 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHHTTCEEEEEESSCC
T ss_pred cEEEEEEECHHHHHHHHHHHHhCCCEEEEEcCCCC
Confidence 47999999999996 89999999999999999854
No 336
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=92.01 E-value=0.14 Score=52.18 Aligned_cols=33 Identities=30% Similarity=0.484 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|..|+.+|..|++.|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAELGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHhcCCEEEEEECCH
Confidence 479999999999999999999999999999974
No 337
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.99 E-value=0.14 Score=49.08 Aligned_cols=33 Identities=30% Similarity=0.476 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQGGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 379999999999999999999999999999874
No 338
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=91.90 E-value=0.16 Score=49.07 Aligned_cols=35 Identities=31% Similarity=0.408 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
...+|.|||+|-+|.++|+.|+..|. .+.++|.+.
T Consensus 6 ~~~KI~IiGaG~vG~~~a~~l~~~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 6 SRSKVAIIGAGFVGASAAFTMALRQTANELVLIDVFK 42 (318)
T ss_dssp -CCCEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC-
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 34689999999999999999999998 899999874
No 339
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=91.82 E-value=0.15 Score=49.16 Aligned_cols=33 Identities=24% Similarity=0.471 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
..|.|||+|-.|.++|..|++.|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGKDNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCc
Confidence 479999999999999999999998 999999974
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.64 E-value=0.2 Score=48.46 Aligned_cols=33 Identities=18% Similarity=0.392 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
.+|.|||||-.|.++|..|++.|+ +|.|+|.+.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999874
No 341
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.62 E-value=0.18 Score=48.51 Aligned_cols=34 Identities=32% Similarity=0.536 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.+|.|||.|..|...|..|++.|++|++++|++.
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 55 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLS 55 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 5799999999999999999999999999999853
No 342
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=91.61 E-value=0.12 Score=49.42 Aligned_cols=33 Identities=27% Similarity=0.440 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|-.|.+.|..|++.|.+|++++|+.
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQSLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHHCCCeEEEEEecc
Confidence 479999999999999999999999999999973
No 343
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.56 E-value=0.16 Score=51.98 Aligned_cols=34 Identities=18% Similarity=0.263 Sum_probs=32.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhC-CC-eEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD-GR-RVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~-G~-~v~lvEr~~~ 88 (502)
.+|.|||+|..|+.+|..|++. |+ +|+++|+++.
T Consensus 19 mkIaVIGlG~mG~~lA~~la~~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFADAPCFEKVLGFQRNSK 54 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHHHSTTCCEEEEECCCCT
T ss_pred CEEEEECcCHHHHHHHHHHHHhCCCCeEEEEECChh
Confidence 4799999999999999999999 99 9999999865
No 344
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.55 E-value=0.19 Score=49.97 Aligned_cols=35 Identities=29% Similarity=0.424 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...|+|+|+|.+|+.+|..|...|.+|+++|+++.
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~ 206 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAA 206 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCST
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 46899999999999999999999999999998753
No 345
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=91.53 E-value=0.16 Score=48.71 Aligned_cols=32 Identities=31% Similarity=0.521 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
+|.|||||-.|.++|..|++.|+ +|.++|++.
T Consensus 2 kI~VIGaG~vG~~la~~la~~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVLRGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCH
Confidence 68999999999999999999999 999999874
No 346
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=91.50 E-value=0.17 Score=49.06 Aligned_cols=34 Identities=29% Similarity=0.500 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
....|.|||+|..|.++|..|++.|+ ++.++|.+
T Consensus 4 ~~~kI~ViGaG~vG~~~a~~l~~~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 4 HVNKVALIGAGFVGSSYAFALINQGITDELVVIDVN 39 (326)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEecc
Confidence 34589999999999999999999998 89999986
No 347
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.49 E-value=0.18 Score=50.52 Aligned_cols=34 Identities=32% Similarity=0.507 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|.+|+.+|..|...|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 4589999999999999999999999999999875
No 348
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.46 E-value=0.23 Score=50.45 Aligned_cols=34 Identities=29% Similarity=0.525 Sum_probs=31.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|.|||+|.-|...|..|++.|++|+++|+++.
T Consensus 55 ~kVaVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 88 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFGLAGIETFLVVRNEQ 88 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECcHH
Confidence 4799999999999999999999999999999854
No 349
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.44 E-value=0.17 Score=49.91 Aligned_cols=33 Identities=30% Similarity=0.504 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|+|+|+|.+|+.++..|+..|.+|++++|++
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVGLGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 589999999999999999999999999999974
No 350
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=91.32 E-value=0.18 Score=49.30 Aligned_cols=33 Identities=27% Similarity=0.395 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|-.|...|..|++.|++|++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 351
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=91.29 E-value=0.17 Score=49.84 Aligned_cols=35 Identities=23% Similarity=0.449 Sum_probs=32.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~ 86 (502)
-.+..|+|+|||.+|..+|..|...|. +|+++|++
T Consensus 186 l~d~kVVi~GAGaAG~~iA~ll~~~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 186 LDEVSIVVNGGGSAGLSITRKLLAAGATKVTVVDKF 221 (398)
T ss_dssp TTSCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCccEEEEECCCHHHHHHHHHHHHcCCCeEEEEECC
Confidence 456799999999999999999999999 99999997
No 352
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=91.25 E-value=0.24 Score=50.52 Aligned_cols=33 Identities=27% Similarity=0.459 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 38 ~kV~VIGaG~MG~~iA~~la~~G~~V~l~D~~~ 70 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFARVGISVVAVESDP 70 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHHTTTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCH
Confidence 369999999999999999999999999999874
No 353
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=91.23 E-value=0.25 Score=47.89 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 34 ~~~VlIvGaGGlGs~va~~La~aGVg~ItlvD~D~V 69 (340)
T 3rui_A 34 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 69 (340)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCEEEEecCCEe
Confidence 5689999999999999999999998 7999999854
No 354
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=91.18 E-value=0.2 Score=47.94 Aligned_cols=34 Identities=24% Similarity=0.203 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..+|.|||.|..|...|..|++.|++|++++|++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLRAGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCeEEEEECCH
Confidence 3579999999999999999999999999999874
No 355
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=91.17 E-value=0.12 Score=49.69 Aligned_cols=31 Identities=26% Similarity=0.371 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhC-----C-CeEEEEec
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD-----G-RRVHVIER 85 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~-----G-~~v~lvEr 85 (502)
.+|.|||+|..|.+.|..|++. | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLALRAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCccccCCCCCEEEEEc
Confidence 4799999999999999999999 9 99999987
No 356
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=91.14 E-value=0.16 Score=48.38 Aligned_cols=36 Identities=28% Similarity=0.391 Sum_probs=32.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
.+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~V 71 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKV 71 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 45689999999999999999999998 8999998753
No 357
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=91.09 E-value=0.18 Score=48.09 Aligned_cols=35 Identities=20% Similarity=0.237 Sum_probs=32.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..+|.|||.|..|...|..|++.|++|++++|++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTEWPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTTSTTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHH
Confidence 45899999999999999999999999999999864
No 358
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=91.08 E-value=0.18 Score=50.82 Aligned_cols=35 Identities=20% Similarity=0.244 Sum_probs=32.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|.|||.|-+||.+|..|++.|++|+.+|.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A~~G~~V~g~Did~ 54 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFALLGHRVVGYDVNP 54 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred CCCEEEEEccCHHHHHHHHHHHhCCCcEEEEECCH
Confidence 44689999999999999999999999999999874
No 359
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=91.06 E-value=0.15 Score=53.35 Aligned_cols=36 Identities=17% Similarity=0.382 Sum_probs=33.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...+|+|||+|.+|+-+|..|++.|.+|+|++|.+.
T Consensus 190 ~~krV~VIG~G~sgve~a~~l~~~~~~Vtv~~r~~~ 225 (549)
T 4ap3_A 190 TGKRVGVIGTGSSGIQSIPIIAEQAEQLFVFQRSAN 225 (549)
T ss_dssp BTCEEEEECCSHHHHHHHHHHHHHBSEEEEEESSCC
T ss_pred CCCEEEEECCCchHHHHHHHHHhhCCEEEEEECCCC
Confidence 346899999999999999999999999999999864
No 360
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.03 E-value=0.24 Score=47.87 Aligned_cols=34 Identities=24% Similarity=0.442 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
..+|.|||+|..|.++|..|++.|+ ++.|+|.+.
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~~~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAGLKELGDVVLFDIAE 41 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCeEEEEeCCc
Confidence 4589999999999999999999999 999999875
No 361
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=90.98 E-value=0.21 Score=48.53 Aligned_cols=35 Identities=26% Similarity=0.418 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+.+|.|||+|-.|.+.|..|++.|++|++++|++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~~G~~V~~~~r~~ 47 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHENGEEVILWARRK 47 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred cCCcEEEECcCHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45789999999999999999999999999999874
No 362
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.73 E-value=0.22 Score=47.20 Aligned_cols=33 Identities=30% Similarity=0.480 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.|.|||.|..|...|..|++.|++|++++|++.
T Consensus 3 ~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPE 35 (287)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSSGG
T ss_pred EEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999999853
No 363
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.66 E-value=0.12 Score=47.44 Aligned_cols=33 Identities=15% Similarity=0.120 Sum_probs=30.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+-.|+|+|+|..|..+|..|.+.|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRGSEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHhCCe-EEEEECCH
Confidence 3479999999999999999999999 99999985
No 364
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.65 E-value=0.22 Score=50.11 Aligned_cols=33 Identities=15% Similarity=0.219 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..+|.|||+|..|+.+|..|++ |++|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~-G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ-NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc-CCeEEEEecCH
Confidence 3589999999999999999998 99999999974
No 365
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=90.63 E-value=0.22 Score=48.01 Aligned_cols=34 Identities=29% Similarity=0.439 Sum_probs=29.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...+|.|||+|-.|.+.|..|++.|++|+++ +++
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~~~G~~V~l~-~~~ 51 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLARAGHEVILI-ARP 51 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHHHTTCEEEEE-CCH
T ss_pred cCCcEEEECcCHHHHHHHHHHHHCCCeEEEE-EcH
Confidence 3457999999999999999999999999999 763
No 366
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.61 E-value=0.27 Score=45.45 Aligned_cols=37 Identities=24% Similarity=0.391 Sum_probs=32.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.....|.|||+|-.|.++|..|++.|++|++++|++.
T Consensus 17 ~~~~kIgiIG~G~mG~alA~~L~~~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 17 FQGMKIAVLGTGTVGRTMAGALADLGHEVTIGTRDPK 53 (245)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred cCCCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCChh
Confidence 3456899999999999999999999999999999753
No 367
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=90.59 E-value=0.23 Score=47.63 Aligned_cols=32 Identities=28% Similarity=0.291 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|-.|.+.|..|+ .|.+|++++|+.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCceEEEECCH
Confidence 47999999999999999999 999999999874
No 368
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=90.59 E-value=0.24 Score=47.63 Aligned_cols=32 Identities=25% Similarity=0.472 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHhhC--CCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~ 87 (502)
+|.|||+|-.|.++|..|++. |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAEKQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCCh
Confidence 589999999999999999995 78999999974
No 369
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=90.58 E-value=0.28 Score=44.37 Aligned_cols=33 Identities=33% Similarity=0.336 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~~~g~~V~~~~r~~ 61 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLVGSGFKVVVGSRNP 61 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSH
T ss_pred CEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 370
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=90.50 E-value=0.25 Score=47.09 Aligned_cols=34 Identities=21% Similarity=0.396 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+...|.|||+|.-|...|..|+ .|++|+++|+++
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-cCCEEEEEECCH
Confidence 4568999999999999999999 999999999975
No 371
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=90.49 E-value=0.25 Score=50.62 Aligned_cols=34 Identities=24% Similarity=0.485 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~aG~~V~l~D~~~e 39 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAASHGHQVLLYDISAE 39 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEECSCHH
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCeEEEEECCHH
Confidence 4799999999999999999999999999999853
No 372
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=90.48 E-value=0.18 Score=51.13 Aligned_cols=32 Identities=28% Similarity=0.384 Sum_probs=30.2
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|.|||+|..|+.+|..|++.|++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~la~~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 373
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=90.46 E-value=0.23 Score=48.87 Aligned_cols=35 Identities=26% Similarity=0.353 Sum_probs=32.3
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~ 86 (502)
-.+..|+|+|||-+|..+|..|...|. +|+++||.
T Consensus 190 l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 190 IEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRK 225 (388)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETT
T ss_pred CCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECC
Confidence 456799999999999999999999998 89999997
No 374
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.45 E-value=0.22 Score=46.36 Aligned_cols=35 Identities=26% Similarity=0.381 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v 63 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDV 63 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBC
T ss_pred cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 4689999999999999999999998 8999998753
No 375
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=90.43 E-value=0.3 Score=46.93 Aligned_cols=34 Identities=26% Similarity=0.423 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|.|||+|..|...|..|++.|++|.+++|++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHHTTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 3579999999999999999999999999999874
No 376
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=90.42 E-value=0.28 Score=47.10 Aligned_cols=33 Identities=24% Similarity=0.397 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
.+|.|||||-.|..+|..|+..|+ +|.++|.+.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAAKELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCeEEEEeCCc
Confidence 479999999999999999999997 999999874
No 377
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=90.27 E-value=0.33 Score=46.91 Aligned_cols=34 Identities=26% Similarity=0.313 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
...|.|||+|..|.++|..|++.|+ ++.++|.++
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALIKQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCceEEEEeCCh
Confidence 3589999999999999999999998 999999975
No 378
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=90.22 E-value=0.14 Score=46.65 Aligned_cols=33 Identities=30% Similarity=0.371 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEE-EecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHV-IERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~l-vEr~~ 87 (502)
..|.|||+|-.|.+.|..|++.|++|++ ++|++
T Consensus 24 mkI~IIG~G~mG~~la~~l~~~g~~V~~v~~r~~ 57 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFTAAQIPAIIANSRGP 57 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHHHTTCCEEEECTTCG
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCEEEEEECCCH
Confidence 5799999999999999999999999999 88874
No 379
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.22 E-value=0.29 Score=48.32 Aligned_cols=34 Identities=26% Similarity=0.497 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~ 199 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIALGMGAQVTILDVNH 199 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 3579999999999999999999999999999874
No 380
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=90.15 E-value=0.3 Score=45.91 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|.+|.++|..|++.|.+|+|+.|+.
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~ 152 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLLSLDCAVTITNRTV 152 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCH
Confidence 4579999999999999999999999999999873
No 381
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.12 E-value=0.33 Score=45.54 Aligned_cols=35 Identities=37% Similarity=0.533 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...|+|+|+|-+|.++|..|++.|.+|+|+.|...
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ 152 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSR 152 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 56899999999999999999999999999998753
No 382
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=90.03 E-value=1.5 Score=44.09 Aligned_cols=53 Identities=15% Similarity=0.143 Sum_probs=38.4
Q ss_pred HHHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCCc
Q 010765 141 IQRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCFS 199 (502)
Q Consensus 141 ~~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~S 199 (502)
.+.+.+.+++. ||+++.++ |++++. + .+.+.+.+|+..++.+|++|.|-|...
T Consensus 203 ~~~l~~~l~~~-GV~~~~~~~v~~v~~--~---~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 203 KRLVEDLFAER-NIDWIANVAVKAIEP--D---KVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHT-TCEEECSCEEEEECS--S---EEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHhC-CeEEEeCceEEEEeC--C---ceEEEeeCCCceEeecceEEEeccCCC
Confidence 44455555666 89999998 877743 3 355667778777888999999998653
No 383
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=90.02 E-value=0.3 Score=44.53 Aligned_cols=36 Identities=25% Similarity=0.355 Sum_probs=32.0
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
....|+|.|| |-.|..++..|.++|++|+++.|++.
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~ 56 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEE 56 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGG
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChH
Confidence 3457999999 99999999999999999999999854
No 384
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=90.01 E-value=0.41 Score=45.63 Aligned_cols=33 Identities=27% Similarity=0.545 Sum_probs=30.7
Q ss_pred CcEEEEC-CCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVG-AGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVG-aG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.||| +|-.|.+.|..|++.|++|.+++|++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRASGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHhCCCeEEEEECCc
Confidence 4799999 99999999999999999999999874
No 385
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=89.98 E-value=0.096 Score=48.01 Aligned_cols=33 Identities=24% Similarity=0.269 Sum_probs=30.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
..+|.|||+|..|.++|..|++.|++|+++++.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~~G~~V~~~~~~ 38 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDSVGHYVTVLHAP 38 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHHTTCEEEECSSG
T ss_pred CcEEEEEeeCHHHHHHHHHHHHCCCEEEEecCH
Confidence 457999999999999999999999999999883
No 386
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=89.73 E-value=0.27 Score=48.22 Aligned_cols=35 Identities=26% Similarity=0.476 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 118 ~~~VlvvG~GglGs~va~~La~aGvg~i~lvD~D~V 153 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILATSGIGEIILIDNDQI 153 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEEECCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCCeEEEECCCcC
Confidence 5689999999999999999999998 8999998753
No 387
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=89.45 E-value=0.24 Score=47.92 Aligned_cols=30 Identities=37% Similarity=0.522 Sum_probs=28.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEec
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIER 85 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr 85 (502)
.|.|||+|-.|.+.|..|++.|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVDNGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHHHCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHhCCCeEEEEEc
Confidence 589999999999999999999999999998
No 388
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=89.45 E-value=0.36 Score=47.77 Aligned_cols=34 Identities=35% Similarity=0.635 Sum_probs=31.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|..|+.+|..|+..|.+|+++++++
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~ 201 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANGMGATVTVLDINI 201 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999999874
No 389
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.40 E-value=0.37 Score=47.23 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=31.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
.|+|+|||..|..+|..+.+.|++|+++|.++..+
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~~G~~vv~vd~~~~~~ 37 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKKAGMKVVLVDKNPQAL 37 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred EEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 69999999999999999999999999999886543
No 390
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=89.36 E-value=0.28 Score=49.07 Aligned_cols=31 Identities=19% Similarity=0.354 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|.|||+|-.|+.+|..|++ |++|+++++++
T Consensus 2 kI~VIG~G~vG~~~A~~La~-G~~V~~~d~~~ 32 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLSL-QNEVTIVDILP 32 (402)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TSEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHhC-CCEEEEEECCH
Confidence 58999999999999999999 99999999874
No 391
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=89.24 E-value=0.37 Score=45.98 Aligned_cols=34 Identities=21% Similarity=0.424 Sum_probs=31.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
...|+|+|+|.+|.++|..|++.|. +|+|+.|..
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~ 175 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLLSTAAERIDMANRTV 175 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSH
T ss_pred CCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999998 999999874
No 392
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=89.21 E-value=0.35 Score=46.65 Aligned_cols=35 Identities=23% Similarity=0.353 Sum_probs=32.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCC-CeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDG-RRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~~ 88 (502)
...|.|||.|..|.+.|..|++.| ++|++++|++.
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L~~~G~~~V~~~dr~~~ 59 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGLGGRNAARLAAYDLRFN 59 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCSEEEEECGGGG
T ss_pred CCeEEEECccHHHHHHHHHHHHcCCCeEEEEeCCCc
Confidence 357999999999999999999999 99999999864
No 393
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=89.21 E-value=0.37 Score=43.19 Aligned_cols=32 Identities=31% Similarity=0.410 Sum_probs=29.9
Q ss_pred cEEEEC-CCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVG-AGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVG-aG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|.|+| +|-.|...|..|++.|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 589999 99999999999999999999999874
No 394
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.15 E-value=0.43 Score=45.92 Aligned_cols=34 Identities=26% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
...|.|||.|..|.+.|..|++.|+ +|.+++|++
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 68 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCH
Confidence 3579999999999999999999999 999999875
No 395
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=89.15 E-value=0.22 Score=47.21 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
+|.|||.|..|...|..|++.|++|++++|++.
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~~G~~V~~~dr~~~ 35 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVRAGFDVTVWNRNPA 35 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHHHTCCEEEECSSGG
T ss_pred eEEEEccCHHHHHHHHHHHHCCCeEEEEcCCHH
Confidence 699999999999999999999999999999853
No 396
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.08 E-value=0.49 Score=45.27 Aligned_cols=34 Identities=35% Similarity=0.588 Sum_probs=31.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..+|.|||.|..|...|..|++.|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLKQGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 3579999999999999999999999999999875
No 397
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=89.06 E-value=0.34 Score=46.79 Aligned_cols=34 Identities=24% Similarity=0.440 Sum_probs=31.5
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|.|||.|..|...|..|++.|++|++++|++
T Consensus 31 ~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~ 64 (320)
T 4dll_A 31 ARKITFLGTGSMGLPMARRLCEAGYALQVWNRTP 64 (320)
T ss_dssp CSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 3579999999999999999999999999999875
No 398
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=89.01 E-value=0.36 Score=50.41 Aligned_cols=36 Identities=22% Similarity=0.434 Sum_probs=32.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
.+..|+|||+|-.|+.+|..|++.|+ +++|+|.+.-
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~aGVG~ItLvD~D~V 361 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 361 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECCCBC
T ss_pred hCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCCC
Confidence 34689999999999999999999998 8999998854
No 399
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=88.83 E-value=0.52 Score=44.26 Aligned_cols=34 Identities=29% Similarity=0.521 Sum_probs=31.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|+|.|+|..|..++..|.+.|++|+++.|+..
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3699999999999999999999999999999854
No 400
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.79 E-value=0.25 Score=48.60 Aligned_cols=32 Identities=34% Similarity=0.497 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+|.|||+|-.|.+.|..|++.|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTTTEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 79999999999999999999999999999874
No 401
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.60 E-value=0.38 Score=48.90 Aligned_cols=35 Identities=31% Similarity=0.397 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|+|+|+|..|.++|..|+..|.+|+++|+++
T Consensus 264 ~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~ 298 (488)
T 3ond_A 264 AGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDP 298 (488)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCH
Confidence 34579999999999999999999999999999874
No 402
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=88.53 E-value=0.46 Score=48.91 Aligned_cols=35 Identities=23% Similarity=0.300 Sum_probs=32.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|.|||.|..|..+|..|+++|++|.+++|++
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAADHGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34689999999999999999999999999999975
No 403
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=88.52 E-value=0.33 Score=46.86 Aligned_cols=32 Identities=31% Similarity=0.403 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
.|.|||+|-.|.++|..|++.|+ +|.++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCCh
Confidence 58999999999999999999999 999999874
No 404
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=88.50 E-value=0.36 Score=46.67 Aligned_cols=33 Identities=21% Similarity=0.311 Sum_probs=30.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.-+|+|||+|.+|+-+|..|++.| +|+++++..
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVSTVA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHhhC-CEEEEECCC
Confidence 458999999999999999999999 799999873
No 405
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=88.48 E-value=0.52 Score=44.50 Aligned_cols=33 Identities=27% Similarity=0.430 Sum_probs=30.8
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+ |-.|.+.|..|++.|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHDSAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHSSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 47999999 9999999999999999999999874
No 406
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=88.45 E-value=0.34 Score=46.13 Aligned_cols=32 Identities=22% Similarity=0.232 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
+|.|||+|..|.++|..|++.|+ ++.++|+++
T Consensus 2 kI~ViGaG~vG~~la~~l~~~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCh
Confidence 58999999999999999999998 899999874
No 407
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=88.41 E-value=0.4 Score=49.94 Aligned_cols=35 Identities=23% Similarity=0.445 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
...|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 327 ~~kVLIVGaGGLGs~va~~La~aGVG~ItLvD~D~V 362 (598)
T 3vh1_A 327 NTKVLLLGAGTLGCYVSRALIAWGVRKITFVDNGTV 362 (598)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCCEEEEECCSBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEECCCcc
Confidence 4689999999999999999999999 8999998744
No 408
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.36 E-value=0.46 Score=44.55 Aligned_cols=34 Identities=21% Similarity=0.362 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|+|.|||..|..++..|.++|++|+++.|++.
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~ 39 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPD 39 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGG
T ss_pred CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChh
Confidence 4799999999999999999999999999999753
No 409
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=88.35 E-value=0.36 Score=46.42 Aligned_cols=33 Identities=21% Similarity=0.333 Sum_probs=30.6
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~ 86 (502)
...|.|||.|..|...|..|++.|+ +|++++|+
T Consensus 24 ~~~I~iIG~G~mG~~~A~~L~~~G~~~V~~~dr~ 57 (312)
T 3qsg_A 24 AMKLGFIGFGEAASAIASGLRQAGAIDMAAYDAA 57 (312)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHSCCEEEEECSS
T ss_pred CCEEEEECccHHHHHHHHHHHHCCCCeEEEEcCC
Confidence 3579999999999999999999999 99999996
No 410
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=88.30 E-value=0.37 Score=45.33 Aligned_cols=34 Identities=24% Similarity=0.329 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|-+|.+.|..|++.|.+|+|+.|+.
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~ 152 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLLQAQQNIVLANRTF 152 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 4579999999999999999999999999999874
No 411
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=88.29 E-value=0.44 Score=49.94 Aligned_cols=35 Identities=26% Similarity=0.366 Sum_probs=32.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
-.|+|+|+|..|..+|..|.+.|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDRKPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCCEEEEECChHH
Confidence 68999999999999999999999999999999653
No 412
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=88.21 E-value=0.53 Score=43.73 Aligned_cols=34 Identities=32% Similarity=0.473 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
.. .|+|+|+|-+|.+++..|.+.|. +|.|+.|..
T Consensus 108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~ 142 (253)
T 3u62_A 108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTI 142 (253)
T ss_dssp CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCH
T ss_pred CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35 89999999999999999999998 899999974
No 413
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=88.18 E-value=0.44 Score=44.78 Aligned_cols=32 Identities=31% Similarity=0.503 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|.|||+|..|.+.|..|.+.|++|.+++|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 58999999999999999999999999999874
No 414
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=88.18 E-value=0.37 Score=45.80 Aligned_cols=33 Identities=27% Similarity=0.457 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|.+++|++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 479999999999999999999999999999874
No 415
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=88.17 E-value=0.41 Score=48.70 Aligned_cols=33 Identities=30% Similarity=0.360 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
...|+|||||.+|...|..|.+.|.+|+|++.+
T Consensus 12 ~~~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~ 44 (457)
T 1pjq_A 12 DRDCLIVGGGDVAERKARLLLEAGARLTVNALT 44 (457)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHTTBEEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCcCEEEEEcCC
Confidence 457999999999999999999999999999976
No 416
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.16 E-value=0.47 Score=46.59 Aligned_cols=34 Identities=26% Similarity=0.461 Sum_probs=31.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..+|.|||.|..|...|..|++.|++|++++|++
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRKGGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHhCCCEEEEEeCCH
Confidence 4589999999999999999999999999999974
No 417
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=88.11 E-value=0.44 Score=46.03 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=30.6
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
....|.|||+|..|.++|..|+..|+ ++.|+|.+
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~ 43 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCC
Confidence 34589999999999999999999998 89999985
No 418
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=88.04 E-value=0.35 Score=45.61 Aligned_cols=34 Identities=32% Similarity=0.415 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
...|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 151 (277)
T 3don_A 117 DAYILILGAGGASKGIANELYKIVRPTLTVANRTM 151 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCG
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 4579999999999999999999999 899999875
No 419
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=88.02 E-value=0.44 Score=45.90 Aligned_cols=34 Identities=24% Similarity=0.496 Sum_probs=30.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
...+|.|||||-+|.++|..|+..|. .+.++|.+
T Consensus 5 ~~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 5 KGNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLD 40 (317)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence 34689999999999999999999885 89999876
No 420
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=87.98 E-value=0.42 Score=48.93 Aligned_cols=35 Identities=29% Similarity=0.432 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+.+|.|||+|..|.++|..|++.|++|.+++|++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La~~G~~V~v~~r~~ 48 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIESRGYTVSIFNRSR 48 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHTTTCCEEEECSSH
T ss_pred CCCeEEEEccHHHHHHHHHHHHhCCCeEEEEeCCH
Confidence 45689999999999999999999999999999874
No 421
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.98 E-value=0.37 Score=45.94 Aligned_cols=33 Identities=27% Similarity=0.405 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|++++|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHhCCCeEEEEcCCH
Confidence 479999999999999999999999999999874
No 422
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=87.98 E-value=0.54 Score=45.18 Aligned_cols=35 Identities=26% Similarity=0.369 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 153 ~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~ 188 (315)
T 3tnl_A 153 IGKKMTICGAGGAATAICIQAALDGVKEISIFNRKD 188 (315)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred cCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCC
Confidence 34579999999999999999999999 899999873
No 423
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=87.95 E-value=0.58 Score=45.24 Aligned_cols=34 Identities=18% Similarity=0.182 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
...|.|||+|..|.++|..|+..|+ .+.++|.+.
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~~g~~~ev~L~Di~~ 56 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLMKDLADEVALVDVME 56 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHHHCCCSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEECCH
Confidence 4589999999999999999999998 899999863
No 424
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=87.91 E-value=0.54 Score=44.47 Aligned_cols=35 Identities=34% Similarity=0.471 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|-+|.++|..|++.|. +|+|+.|+.
T Consensus 126 ~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~ 161 (283)
T 3jyo_A 126 KLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDT 161 (283)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCH
Confidence 34589999999999999999999999 699998873
No 425
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=87.82 E-value=5.3 Score=39.61 Aligned_cols=50 Identities=20% Similarity=0.195 Sum_probs=35.4
Q ss_pred HHHHHHHHcCCCeEEEece-EEEEEeeCCeEEEEEEEeCCCcEEEEecCEEEEecCCC
Q 010765 142 QRMREKAASLPNVRLEQGT-VTSLLEENGTIKGVQYKTKDGQELRAYAPLTIVCDGCF 198 (502)
Q Consensus 142 ~~L~~~a~~~~~v~i~~~~-v~~~~~~~~~v~~v~~~~~~G~~~~v~ad~vI~ADG~~ 198 (502)
..+...+++. + +++.++ |+++..++++ |.+.+.+|++ ++||.||.|.|..
T Consensus 208 ~l~~~~~~~~-g-~i~~~~~V~~i~~~~~~---v~v~~~~g~~--~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 208 DLVDAMSQEI-P-EIRLQTVVTGIDQSGDV---VNVTVKDGHA--FQAHSVIVATPMN 258 (431)
T ss_dssp HHHHHHHTTC-S-CEESSCCEEEEECSSSS---EEEEETTSCC--EEEEEEEECSCGG
T ss_pred HHHHHHHhhC-C-ceEeCCEEEEEEEcCCe---EEEEECCCCE--EEeCEEEEecCcc
Confidence 3344444444 6 899998 9999887764 4466677864 4599999999953
No 426
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=87.75 E-value=0.9 Score=44.84 Aligned_cols=38 Identities=26% Similarity=0.391 Sum_probs=33.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEP 90 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~ 90 (502)
....|+|+|+|..|..+|..+.+.|++|++++..+..+
T Consensus 11 ~~~~IlIlG~G~lg~~la~aa~~lG~~viv~d~~~~~p 48 (377)
T 3orq_A 11 FGATIGIIGGGQLGKMMAQSAQKMGYKVVVLDPSEDCP 48 (377)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCTTCT
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECCCCCh
Confidence 34679999999999999999999999999999875543
No 427
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=87.65 E-value=0.52 Score=48.19 Aligned_cols=34 Identities=26% Similarity=0.483 Sum_probs=31.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.+|.|||.|..|..+|..|+++|++|.+++|++.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~~~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTVS 38 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSTH
T ss_pred CEEEEEChhHHHHHHHHHHHHCCCEEEEEeCCHH
Confidence 5799999999999999999999999999999853
No 428
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=87.62 E-value=0.59 Score=46.26 Aligned_cols=36 Identities=25% Similarity=0.193 Sum_probs=33.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
....++|+|||..|.++|..++..|++|+|+|.++.
T Consensus 203 P~~rL~IfGAGhva~ala~~a~~lg~~V~v~D~R~~ 238 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGAFLGYRVTVCDARPV 238 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHHHTTCEEEEEESCTT
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCchh
Confidence 457999999999999999999999999999998854
No 429
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=87.56 E-value=0.41 Score=45.95 Aligned_cols=32 Identities=34% Similarity=0.480 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHhhCC--CeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG--RRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G--~~v~lvEr~~ 87 (502)
.|.|||+|-.|.++|..|++.| .+|.++|++.
T Consensus 3 kI~VIGaG~~G~~la~~L~~~g~~~~V~l~d~~~ 36 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANE 36 (309)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEcCCH
Confidence 6999999999999999999999 6999999974
No 430
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=87.44 E-value=0.6 Score=41.71 Aligned_cols=32 Identities=31% Similarity=0.514 Sum_probs=29.9
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|+|.|| |-.|..++..|.++|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCc
Confidence 5899997 9999999999999999999999985
No 431
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=87.43 E-value=0.5 Score=43.87 Aligned_cols=34 Identities=21% Similarity=0.325 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC----CeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDG----RRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G----~~v~lvEr~~~ 88 (502)
..|.|||+|-.|.+.|..|++.| ++|.+++|++.
T Consensus 5 m~i~iiG~G~mG~~~a~~l~~~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIANANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHTSSCGGGEEEECSSCC
T ss_pred CEEEEECcCHHHHHHHHHHHHCCCCCCCeEEEEeCCcc
Confidence 47999999999999999999999 79999999854
No 432
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=87.32 E-value=0.71 Score=42.55 Aligned_cols=36 Identities=14% Similarity=0.317 Sum_probs=31.3
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 54 PTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 54 ~~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
...|+|.|| |-.|.++|..|+++|.+|++++|+...
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~ 58 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENP 58 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCccc
Confidence 346899997 688999999999999999999998653
No 433
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=87.30 E-value=0.48 Score=45.56 Aligned_cols=32 Identities=25% Similarity=0.471 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
.|.|||+|..|.++|..|++.|+ .+.++|.++
T Consensus 2 kv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVARQDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHHHTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCch
Confidence 58999999999999999999998 899999975
No 434
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=87.24 E-value=0.54 Score=44.52 Aligned_cols=33 Identities=36% Similarity=0.576 Sum_probs=29.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+|+|-.|.++|..|++.| +|+++.|+.
T Consensus 128 ~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~ 160 (287)
T 1nvt_A 128 DKNIVIYGAGGAARAVAFELAKDN-NIIIANRTV 160 (287)
T ss_dssp SCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHCC-CEEEEECCH
Confidence 357999999999999999999999 999998863
No 435
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=87.23 E-value=0.49 Score=45.26 Aligned_cols=34 Identities=21% Similarity=0.405 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~~ 88 (502)
..|.|||||-.|...|..|+..|+ .+.|+|.+..
T Consensus 15 ~kV~ViGaG~vG~~~a~~l~~~g~~~ev~L~Di~~~ 50 (303)
T 2i6t_A 15 NKITVVGGGELGIACTLAISAKGIADRLVLLDLSEG 50 (303)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECCC--
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCcc
Confidence 589999999999999999999998 9999999854
No 436
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=87.23 E-value=0.53 Score=44.26 Aligned_cols=32 Identities=28% Similarity=0.554 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
.|.|||+|..|.+.|..|++.|+ +|.++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCH
Confidence 59999999999999999999998 999999874
No 437
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=87.19 E-value=0.73 Score=40.55 Aligned_cols=34 Identities=29% Similarity=0.429 Sum_probs=31.1
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|+|.|| |-.|..++..|.++|++|.++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChh
Confidence 36999999 99999999999999999999999754
No 438
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=87.18 E-value=0.65 Score=44.12 Aligned_cols=35 Identities=26% Similarity=0.445 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|.|||+|..|..+|..|...|.+|++++|..
T Consensus 154 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~ 188 (293)
T 3d4o_A 154 HGANVAVLGLGRVGMSVARKFAALGAKVKVGARES 188 (293)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCH
Confidence 34579999999999999999999999999999874
No 439
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=87.16 E-value=0.42 Score=48.09 Aligned_cols=34 Identities=21% Similarity=0.331 Sum_probs=31.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..+.-|||.|..|+.+|..|++.|++|+++|+++
T Consensus 11 ~~~~~ViGlGyvGlp~A~~La~~G~~V~~~D~~~ 44 (431)
T 3ojo_A 11 GSKLTVVGLGYIGLPTSIMFAKHGVDVLGVDINQ 44 (431)
T ss_dssp -CEEEEECCSTTHHHHHHHHHHTTCEEEEECSCH
T ss_pred CCccEEEeeCHHHHHHHHHHHHCCCEEEEEECCH
Confidence 3467899999999999999999999999999985
No 440
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=87.04 E-value=0.48 Score=51.16 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=31.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|.|||+|..|...|..|++.|++|+++|+++.
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~~ 346 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALILSNYPVILKEVNEK 346 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHTTTCCEEEECSSHH
T ss_pred cEEEEEcCCHhhHHHHHHHHhCCCEEEEEECCHH
Confidence 3699999999999999999999999999999853
No 441
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=87.03 E-value=0.39 Score=47.43 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=30.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCC-------CeEEEEecCCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG-------RRVHVIERDVT 88 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G-------~~v~lvEr~~~ 88 (502)
.|.|||+|-.|.+.|..|++.| ++|++++|++.
T Consensus 23 kI~iIGaG~mG~alA~~L~~~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 23 KISILGSGNWASAISKVVGTNAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp CEEEECCSHHHHHHHHHHHHHHHHCTTBCSCEEEECCSCC
T ss_pred EEEEECcCHHHHHHHHHHHHcCCccCCCCCeEEEEECChh
Confidence 6999999999999999999999 99999999754
No 442
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=86.99 E-value=0.48 Score=44.63 Aligned_cols=34 Identities=29% Similarity=0.488 Sum_probs=30.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|||+|.+|.+.|..|.+.|.+|.+++|++
T Consensus 129 ~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~ 162 (275)
T 2hk9_A 129 EKSILVLGAGGASRAVIYALVKEGAKVFLWNRTK 162 (275)
T ss_dssp GSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSH
T ss_pred CCEEEEECchHHHHHHHHHHHHcCCEEEEEECCH
Confidence 3579999999999999999999999999999873
No 443
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.99 E-value=0.49 Score=44.83 Aligned_cols=32 Identities=25% Similarity=0.300 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMKHGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHHTTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 58999999999999999999999999999874
No 444
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=86.97 E-value=0.48 Score=43.99 Aligned_cols=32 Identities=34% Similarity=0.509 Sum_probs=29.8
Q ss_pred cEEEECCCHHHHHHHHHHhhCC-CeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDG-RRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G-~~v~lvEr~~ 87 (502)
.|.|||+|-.|.+.|..|++.| ++|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHHCCCCeEEEECCCH
Confidence 5899999999999999999999 9999999874
No 445
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.95 E-value=0.49 Score=47.26 Aligned_cols=35 Identities=29% Similarity=0.341 Sum_probs=32.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|+|+|.|..|..+|..|...|.+|+++|+++
T Consensus 219 ~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp 253 (435)
T 3gvp_A 219 GGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDP 253 (435)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred cCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCCh
Confidence 45689999999999999999999999999999874
No 446
>1tt5_B Ubiquitin-activating enzyme E1C isoform 1; cell cycle, ligase; 2.60A {Homo sapiens} SCOP: c.111.1.2 PDB: 3dbl_B 3dbr_B 3dbh_B 3gzn_B* 1yov_B 1r4m_B 1r4n_B*
Probab=86.93 E-value=0.58 Score=47.15 Aligned_cols=35 Identities=34% Similarity=0.610 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
+..|+|||+|-.|..+|..|++.|+ +++|+|.+.-
T Consensus 40 ~~~VlvvG~GGlGs~va~~La~aGvg~i~ivD~D~V 75 (434)
T 1tt5_B 40 TCKVLVIGAGGLGCELLKNLALSGFRQIHVIDMDTI 75 (434)
T ss_dssp TCCEEEECSSTHHHHHHHHHHHTTCCCEEEEECCBC
T ss_pred CCEEEEECcCHHHHHHHHHHHHcCCCEEEEEcCCEe
Confidence 5689999999999999999999999 8999998743
No 447
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=86.93 E-value=0.67 Score=44.18 Aligned_cols=35 Identities=29% Similarity=0.430 Sum_probs=31.9
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|.|||+|..|..+|..|...|.+|++++|.+
T Consensus 156 ~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~ 190 (300)
T 2rir_A 156 HGSQVAVLGLGRTGMTIARTFAALGANVKVGARSS 190 (300)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34579999999999999999999999999999874
No 448
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.86 E-value=0.44 Score=48.82 Aligned_cols=33 Identities=24% Similarity=0.443 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~ 87 (502)
..|.|||+|..|+.+|..|++. |++|+++|+++
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNT 44 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999998 79999999874
No 449
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=86.83 E-value=0.43 Score=47.60 Aligned_cols=30 Identities=27% Similarity=0.419 Sum_probs=28.0
Q ss_pred cEEEECCCHHHHHHHHHHhh-CCCeEEEEec
Q 010765 56 DVIIVGAGVAGAALAHTLGK-DGRRVHVIER 85 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~-~G~~v~lvEr 85 (502)
+|.|||+|-.|.+.|..|++ .|++|+++++
T Consensus 4 kI~ViGaG~~G~~~a~~La~~~G~~V~~~~~ 34 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAASRDGVEVRVLTL 34 (404)
T ss_dssp EEEEECCSHHHHHHHHHHTTSTTEEEEEECC
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCEEEEEeC
Confidence 69999999999999999998 5999999993
No 450
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=86.83 E-value=0.61 Score=44.88 Aligned_cols=34 Identities=26% Similarity=0.530 Sum_probs=30.4
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
...|.|||+|..|.++|+.|++.|. ++.++|++.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~ 41 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANE 41 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCc
Confidence 3589999999999999999999886 899999874
No 451
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=86.70 E-value=0.7 Score=43.42 Aligned_cols=35 Identities=23% Similarity=0.337 Sum_probs=31.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....++|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 119 ~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~ 154 (272)
T 3pwz_A 119 RNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDM 154 (272)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCH
T ss_pred cCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35689999999999999999999997 999998863
No 452
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=86.69 E-value=0.59 Score=44.15 Aligned_cols=35 Identities=20% Similarity=0.301 Sum_probs=31.5
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 121 ~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~ 156 (282)
T 3fbt_A 121 KNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNP 156 (282)
T ss_dssp TTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCH
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCH
Confidence 35689999999999999999999998 899999874
No 453
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=86.66 E-value=0.72 Score=44.90 Aligned_cols=33 Identities=27% Similarity=0.384 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||.|..|.+.|..|.+.|++|.+++|++
T Consensus 9 ~kIgIIG~G~mG~slA~~L~~~G~~V~~~dr~~ 41 (341)
T 3ktd_A 9 RPVCILGLGLIGGSLLRDLHAANHSVFGYNRSR 41 (341)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECSCH
T ss_pred CEEEEEeecHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 469999999999999999999999999999875
No 454
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=86.65 E-value=0.73 Score=43.54 Aligned_cols=35 Identities=20% Similarity=0.359 Sum_probs=31.2
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|-+|.+.|..|++.|. +|.|+.|..
T Consensus 125 ~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~ 160 (281)
T 3o8q_A 125 KGATILLIGAGGAARGVLKPLLDQQPASITVTNRTF 160 (281)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSH
T ss_pred cCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCH
Confidence 34679999999999999999999997 999999873
No 455
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=86.59 E-value=0.74 Score=44.16 Aligned_cols=35 Identities=20% Similarity=0.406 Sum_probs=31.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|-+|.++|..|++.|. +|+|+.|..
T Consensus 147 ~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~ 182 (312)
T 3t4e_A 147 RGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKD 182 (312)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCC
Confidence 34689999999999999999999998 899999873
No 456
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.55 E-value=0.6 Score=47.83 Aligned_cols=33 Identities=27% Similarity=0.483 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|..|...|..|+++|++|.+++|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La~~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMNDHGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 369999999999999999999999999999874
No 457
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.55 E-value=0.75 Score=43.39 Aligned_cols=33 Identities=21% Similarity=0.443 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC---eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR---RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~---~v~lvEr~~ 87 (502)
..|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 4 ~~I~iIG~G~mG~aia~~l~~~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLIANGYDPNRICVTNRSL 39 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHHHTTCCGGGEEEECSSS
T ss_pred CEEEEEcccHHHHHHHHHHHHCCCCCCeEEEEeCCH
Confidence 579999999999999999999999 999999975
No 458
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=86.51 E-value=0.68 Score=41.49 Aligned_cols=32 Identities=31% Similarity=0.563 Sum_probs=30.0
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|+|.|| |-.|..++..|.++|++|.++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4999999 9999999999999999999999974
No 459
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=86.50 E-value=0.33 Score=47.42 Aligned_cols=34 Identities=32% Similarity=0.457 Sum_probs=31.2
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC-------CeEEEEecCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDG-------RRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G-------~~v~lvEr~~~ 88 (502)
..|.|||+|-.|.+.|..|++.| ++|.+++|++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGGNAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCcccCCCCeEEEEEcChh
Confidence 37999999999999999999999 89999999754
No 460
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=86.49 E-value=0.5 Score=44.56 Aligned_cols=31 Identities=26% Similarity=0.370 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.|.|||+|..|...|..|++ |++|.+++|++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~~-g~~V~~~~~~~ 33 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLAR-RFPTLVWNRTF 33 (289)
T ss_dssp CEEEECCSTTHHHHHHHHHT-TSCEEEECSST
T ss_pred eEEEEcccHHHHHHHHHHhC-CCeEEEEeCCH
Confidence 69999999999999999999 99999999874
No 461
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.46 E-value=0.52 Score=48.25 Aligned_cols=35 Identities=34% Similarity=0.465 Sum_probs=31.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..-.|+|+|+|..|..+|..|...|.+|+++|+++
T Consensus 273 ~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 273 GGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDP 307 (494)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCH
T ss_pred CcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 34579999999999999999999999999999874
No 462
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=86.41 E-value=0.74 Score=44.56 Aligned_cols=34 Identities=18% Similarity=0.304 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
....|.|||+|-.|.++|+.|+..|+ .+.|+|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILMKDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHhCCCCceEEEEeCC
Confidence 34689999999999999999999998 89999986
No 463
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=86.29 E-value=0.59 Score=44.39 Aligned_cols=33 Identities=24% Similarity=0.323 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|-.|...|..|++.|++|.+++|++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLKEGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHHTTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 479999999999999999999999999999874
No 464
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=86.28 E-value=0.74 Score=42.88 Aligned_cols=34 Identities=35% Similarity=0.492 Sum_probs=31.0
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.. .|+|||+|-.|.+.|..|.+.|.+|.+++|+.
T Consensus 116 ~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~ 149 (263)
T 2d5c_A 116 KG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTP 149 (263)
T ss_dssp CS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCH
Confidence 34 89999999999999999999999999999873
No 465
>1y8q_A Ubiquitin-like 1 activating enzyme E1A; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_A* 3kyc_A* 3kyd_A*
Probab=86.26 E-value=0.74 Score=44.90 Aligned_cols=35 Identities=23% Similarity=0.383 Sum_probs=32.0
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
+..|+|||+|..|..+|..|++.|+ +++|+|.+.-
T Consensus 36 ~~~VlivG~GGlG~~ia~~La~~Gvg~itlvD~d~V 71 (346)
T 1y8q_A 36 ASRVLLVGLKGLGAEIAKNLILAGVKGLTMLDHEQV 71 (346)
T ss_dssp TCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCCCEEEEEECCCc
Confidence 5689999999999999999999999 8999998743
No 466
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=86.12 E-value=0.75 Score=44.46 Aligned_cols=37 Identities=22% Similarity=0.404 Sum_probs=31.1
Q ss_pred CCCCcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 52 GSPTDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 52 ~~~~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.....|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~ 54 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS 54 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC
Confidence 34457999999 99999999999999999999999864
No 467
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=86.09 E-value=0.73 Score=44.78 Aligned_cols=33 Identities=36% Similarity=0.378 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|-.|.+.|..|++.|++|++++++.
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHHTTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHHCcCEEEEEECCh
Confidence 369999999999999999999999999999874
No 468
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=86.05 E-value=1.1 Score=44.24 Aligned_cols=37 Identities=19% Similarity=0.339 Sum_probs=32.7
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
....|+|+|+|..|..+|..+.+.|++|.+++.++..
T Consensus 13 ~~k~IlIlG~G~~g~~la~aa~~~G~~vi~~d~~~~~ 49 (389)
T 3q2o_A 13 PGKTIGIIGGGQLGRMMALAAKEMGYKIAVLDPTKNS 49 (389)
T ss_dssp TTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSTTC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCCCC
Confidence 3458999999999999999999999999999987543
No 469
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.85 E-value=0.67 Score=47.44 Aligned_cols=32 Identities=44% Similarity=0.637 Sum_probs=30.3
Q ss_pred cEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
+|.|||+|..|...|..|+++|++|.+++|++
T Consensus 3 kIgVIG~G~mG~~lA~~La~~G~~V~v~dr~~ 34 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIAEKGFKVAVFNRTY 34 (478)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred EEEEEChHHHHHHHHHHHHHCCCEEEEEeCCH
Confidence 69999999999999999999999999999874
No 470
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=85.81 E-value=1.1 Score=43.12 Aligned_cols=34 Identities=26% Similarity=0.439 Sum_probs=30.9
Q ss_pred CcEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 55 TDVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 55 ~dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
..|+|.|| |..|..++..|.+.|++|+++.|...
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~ 55 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWLPQGHEILVIDNFAT 55 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCc
Confidence 47999998 99999999999999999999999643
No 471
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=85.71 E-value=0.75 Score=44.32 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCC----CeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDG----RRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G----~~v~lvEr~~ 87 (502)
..|.|||+|-.|.+.|..|.+.| ++|++++|++
T Consensus 23 mkI~iIG~G~mG~ala~~L~~~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTAAGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHHTTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCCcceEEEECCCc
Confidence 47999999999999999999999 7999999874
No 472
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=85.57 E-value=0.89 Score=42.96 Aligned_cols=34 Identities=21% Similarity=0.368 Sum_probs=30.9
Q ss_pred CCcEEEEC-CCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 54 PTDVIIVG-AGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVG-aG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
...|+|+| +|.+|.++|..|++.|.+|+++.|+.
T Consensus 119 gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~ 153 (287)
T 1lu9_A 119 GKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKL 153 (287)
T ss_dssp TCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCH
Confidence 45799999 89999999999999999999999863
No 473
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.52 E-value=0.89 Score=41.84 Aligned_cols=33 Identities=12% Similarity=0.236 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCC----eEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGR----RVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~----~v~lvEr~~ 87 (502)
..|.|||+|-.|.+.|..|.+.|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMINKNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHhCCCCCCCeEEEEeCCH
Confidence 479999999999999999999998 999999974
No 474
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.39 E-value=0.83 Score=42.28 Aligned_cols=33 Identities=15% Similarity=0.284 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|-.|...|..|.+.|.+|.+++|++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQTPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTTSSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHhCCCeEEEECCCH
Confidence 479999999999999999999999999999874
No 475
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=85.29 E-value=0.72 Score=44.28 Aligned_cols=35 Identities=23% Similarity=0.372 Sum_probs=31.5
Q ss_pred CCCCcEEEECCC-HHHHHHHHHHhhCCCeEEEEecC
Q 010765 52 GSPTDVIIVGAG-VAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 52 ~~~~dVvIVGaG-~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
-....|+|||+| ++|..+|..|.+.|.+|++++|.
T Consensus 175 l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~ 210 (320)
T 1edz_A 175 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVN 210 (320)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSS
T ss_pred CCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCc
Confidence 356789999999 67999999999999999999987
No 476
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.18 E-value=0.82 Score=46.71 Aligned_cols=33 Identities=27% Similarity=0.414 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.+|.|||+|..|...|..|+++|++|.+++|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~~~G~~V~v~dr~~ 38 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVESRGYTVAIYNRTT 38 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CcEEEEeeHHHHHHHHHHHHhCCCEEEEEcCCH
Confidence 579999999999999999999999999999874
No 477
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=85.16 E-value=0.83 Score=44.16 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=30.4
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
.+.+|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 8 ~~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~ 43 (326)
T 2zqz_A 8 DHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIF 43 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 34689999999999999999999886 79999985
No 478
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=85.15 E-value=0.49 Score=48.29 Aligned_cols=33 Identities=21% Similarity=0.391 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHhhC--CCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKD--GRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~--G~~v~lvEr~~ 87 (502)
..|.|||+|..|+.+|..|++. |++|+++++++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCH
Confidence 4799999999999999999999 89999999874
No 479
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=85.13 E-value=0.74 Score=44.13 Aligned_cols=32 Identities=34% Similarity=0.397 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 56 DVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 56 dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
+|.|||||-.|.++|..|+..|+ .+.|+|.+.
T Consensus 1 KI~IiGaG~vG~~~a~~l~~~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMMRGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHHHTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHhCCCCEEEEEcCCh
Confidence 48999999999999999999898 699999874
No 480
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=85.00 E-value=0.6 Score=44.52 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=27.9
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
.+|-+||-|..|...|..|.++|++|++++|.+..
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~~~G~~V~v~dr~~~~ 40 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILLEAGYELVVWNRTASK 40 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHHHTTCEEEEC------
T ss_pred CcEEEEecHHHHHHHHHHHHHCCCeEEEEeCCHHH
Confidence 47999999999999999999999999999998653
No 481
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.90 E-value=0.72 Score=42.93 Aligned_cols=33 Identities=36% Similarity=0.567 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCe-EEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRR-VHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~-v~lvEr~~ 87 (502)
..|.|||+|-.|...|..|++.|++ |.+++|++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYRKGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHHHTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHHCCCeEEEEEeCCH
Confidence 4799999999999999999999998 89999874
No 482
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.87 E-value=0.61 Score=50.29 Aligned_cols=33 Identities=18% Similarity=0.401 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 55 TDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 55 ~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..|.|||+|..|...|..|++.|++|+++|+++
T Consensus 315 ~kV~VIGaG~MG~~iA~~la~aG~~V~l~D~~~ 347 (715)
T 1wdk_A 315 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINE 347 (715)
T ss_dssp SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSH
T ss_pred CEEEEECCChhhHHHHHHHHhCCCEEEEEECCH
Confidence 369999999999999999999999999999985
No 483
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=84.83 E-value=0.99 Score=42.62 Aligned_cols=34 Identities=29% Similarity=0.531 Sum_probs=31.2
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCCC
Q 010765 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVTE 89 (502)
Q Consensus 56 dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~~ 89 (502)
+|+|.|| |..|..++..|.++|++|+++-|++..
T Consensus 2 kILVTGatGfIG~~L~~~L~~~G~~V~~l~R~~~~ 36 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNARGHEVTLVSRKPGP 36 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCc
Confidence 5999999 999999999999999999999998653
No 484
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=84.73 E-value=0.75 Score=45.41 Aligned_cols=35 Identities=26% Similarity=0.344 Sum_probs=32.3
Q ss_pred CCCcEEEECC-CHHHHHHHHHHhhCCC---eEEEEecCC
Q 010765 53 SPTDVIIVGA-GVAGAALAHTLGKDGR---RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGa-G~aGl~~A~~La~~G~---~v~lvEr~~ 87 (502)
....|+|+|| |.+|+.++-.+...|. +|+++|++.
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a~~lGa~~~~V~v~D~~~ 251 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLLHKVGIPDANILKWDIKE 251 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHHHHTTCCGGGEEEECHHH
T ss_pred CCCeEEEEcCCCHHHHHHHHHHHhCCCCcCceEEeeccc
Confidence 4679999999 9999999999999998 999999975
No 485
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=84.72 E-value=0.77 Score=45.85 Aligned_cols=35 Identities=34% Similarity=0.491 Sum_probs=31.3
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
....|+|+|+|..|..+|..|...|. +|++++|..
T Consensus 166 ~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~ 201 (404)
T 1gpj_A 166 HDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTY 201 (404)
T ss_dssp TTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSH
T ss_pred cCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 34579999999999999999999998 899999863
No 486
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=84.70 E-value=0.94 Score=42.02 Aligned_cols=35 Identities=20% Similarity=0.221 Sum_probs=30.7
Q ss_pred CCCcEEEECC-C-HHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGA-G-VAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGa-G-~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
....|+|.|| | -.|.++|..|+++|.+|++++|+.
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~ 57 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHE 57 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCH
Confidence 3456999999 7 599999999999999999999874
No 487
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=84.68 E-value=1.2 Score=45.76 Aligned_cols=35 Identities=23% Similarity=0.392 Sum_probs=33.1
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
.++|++|||+|++|+++|..|++.|.+|+|+|+..
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~~v~~~e~~~ 38 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGVQTLMLEMGQ 38 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCEEEEESSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCCcEEEEeCCC
Confidence 45899999999999999999999999999999986
No 488
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=84.66 E-value=0.95 Score=44.03 Aligned_cols=34 Identities=24% Similarity=0.317 Sum_probs=30.1
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCC--eEEEEecCC
Q 010765 54 PTDVIIVGA-GVAGAALAHTLGKDGR--RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGa-G~aGl~~A~~La~~G~--~v~lvEr~~ 87 (502)
..+|.|||+ |-.|.++|..|...|. ++.++|.+.
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~~g~~~evvLiDi~~ 44 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAMMRLTPNLCLYDPFA 44 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHHTTCCSCEEEECSCH
T ss_pred CCEEEEECCCChHHHHHHHHHHhcCCCCEEEEEeCCc
Confidence 457999998 9999999999999995 899999863
No 489
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=84.47 E-value=0.77 Score=43.11 Aligned_cols=34 Identities=24% Similarity=0.458 Sum_probs=30.7
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDV 87 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~ 87 (502)
...|+|+|+|-+|.++|..|.+.|. +|+|+.|..
T Consensus 119 ~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~ 153 (271)
T 1npy_A 119 NAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNV 153 (271)
T ss_dssp TSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCH
T ss_pred CCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCH
Confidence 3579999999999999999999997 799998873
No 490
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=84.42 E-value=0.66 Score=44.92 Aligned_cols=33 Identities=21% Similarity=0.339 Sum_probs=29.4
Q ss_pred CCcEEEECC-CHHHHHHHHHHhhCCC-------eEEEEecC
Q 010765 54 PTDVIIVGA-GVAGAALAHTLGKDGR-------RVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGa-G~aGl~~A~~La~~G~-------~v~lvEr~ 86 (502)
..+|+|+|| |-.|.+++..|...|+ .+.++|+.
T Consensus 5 ~~KI~ViGaaG~VG~~l~~~L~~~~~~~~~~~~ev~l~Di~ 45 (329)
T 1b8p_A 5 PMRVAVTGAAGQICYSLLFRIANGDMLGKDQPVILQLLEIP 45 (329)
T ss_dssp CEEEEESSTTSHHHHHHHHHHHTTTTTCTTCCEEEEEECCS
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCcCCCCCCEEEEEcCC
Confidence 358999998 9999999999999886 79999876
No 491
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=84.34 E-value=1.1 Score=44.85 Aligned_cols=37 Identities=24% Similarity=0.279 Sum_probs=32.7
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.....|+|+|+|..|..++..+.+.|++|.+++.++.
T Consensus 33 ~~~~~IlIlG~G~lg~~~~~aa~~lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 33 LPGAWLGMVGGGQLGRMFCFAAQSMGYRVAVLDPDPA 69 (419)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCTT
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCc
Confidence 3456899999999999999999999999999987654
No 492
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=84.18 E-value=1.1 Score=40.88 Aligned_cols=33 Identities=33% Similarity=0.445 Sum_probs=30.0
Q ss_pred cEEEECC-CHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 56 DVIIVGA-GVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 56 dVvIVGa-G~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
.|+|.|| |-.|..+|..|+++|++|+++.|+..
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~ 36 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQA 36 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChh
Confidence 4899998 99999999999999999999999753
No 493
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=84.17 E-value=0.52 Score=46.07 Aligned_cols=36 Identities=22% Similarity=0.194 Sum_probs=32.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
....++|+|||..+.++|..++..|++|+|+|.++.
T Consensus 198 p~~~L~I~GaGhva~aLa~la~~lgf~V~v~D~R~~ 233 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFASNVGFYTVVTDWRPN 233 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHHHHTEEEEEEESCGG
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCCeEEEECCCcc
Confidence 356899999999999999999999999999998854
No 494
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=84.14 E-value=1.4 Score=44.92 Aligned_cols=40 Identities=30% Similarity=0.513 Sum_probs=35.8
Q ss_pred CCCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCCCCC
Q 010765 52 GSPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVTEPD 91 (502)
Q Consensus 52 ~~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~~~~ 91 (502)
+.++||+|||+|++|+++|..|++.|.+|+|+||++...+
T Consensus 18 ~~~~dv~iiG~G~~g~~~a~~l~~~g~~v~~~e~~~~~Gg 57 (475)
T 3p1w_A 18 GEHYDVIILGTGLKECILSGLLSHYGKKILVLDRNPYYGG 57 (475)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHTTCCEEEECSSSSSCG
T ss_pred cccCCEEEECCCHHHHHHHHHHHHCCCcEEEEeccCCCCC
Confidence 3468999999999999999999999999999999865543
No 495
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=84.14 E-value=0.85 Score=43.90 Aligned_cols=33 Identities=21% Similarity=0.499 Sum_probs=29.8
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC--eEEEEecC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR--RVHVIERD 86 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~--~v~lvEr~ 86 (502)
..+|.|||||-+|.++|+.|+..+. .+.|+|.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~ 39 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVV 39 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCC
Confidence 3689999999999999999999887 79999985
No 496
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=84.11 E-value=1.1 Score=44.09 Aligned_cols=34 Identities=24% Similarity=0.386 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERD 86 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~ 86 (502)
....|+|+|+|-.|..+|..|.+.|.+|++.|++
T Consensus 172 ~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~ 205 (364)
T 1leh_A 172 EGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVN 205 (364)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSC
T ss_pred CcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCC
Confidence 4467999999999999999999999999999864
No 497
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=83.86 E-value=1.1 Score=44.77 Aligned_cols=34 Identities=21% Similarity=0.345 Sum_probs=31.2
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~~ 88 (502)
...|+|+|+|..|..++..+.+.|++|.+++ .+.
T Consensus 24 ~~~I~ilGgG~lg~~l~~aa~~lG~~v~~~d-~~~ 57 (403)
T 3k5i_A 24 SRKVGVLGGGQLGRMLVESANRLNIQVNVLD-ADN 57 (403)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCEEEEEE-STT
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCCEEEEEE-CCC
Confidence 5689999999999999999999999999999 643
No 498
>1y8q_B Anthracycline-, ubiquitin-like 2 activating enzyme E1B; SUMO, heterodimer, UBL, ligase; HET: ATP; 2.25A {Homo sapiens} PDB: 1y8r_B* 3kyc_B* 3kyd_B* 2px9_A
Probab=83.51 E-value=0.86 Score=48.03 Aligned_cols=35 Identities=31% Similarity=0.465 Sum_probs=31.9
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC-eEEEEecCCC
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR-RVHVIERDVT 88 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~-~v~lvEr~~~ 88 (502)
...|+|||+|-.|+.+|..|++.|+ +++|+|.+.-
T Consensus 17 ~s~VlVVGaGGLGsevak~La~aGVG~ItlvD~D~V 52 (640)
T 1y8q_B 17 GGRVLVVGAGGIGCELLKNLVLTGFSHIDLIDLDTI 52 (640)
T ss_dssp HCEEEEECCSHHHHHHHHHHHHHTCCEEEEEECCBC
T ss_pred cCeEEEECcCHHHHHHHHHHHHcCCCeEEEecCCEE
Confidence 4689999999999999999999998 8999998754
No 499
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=83.49 E-value=1.3 Score=43.08 Aligned_cols=35 Identities=26% Similarity=0.247 Sum_probs=30.8
Q ss_pred CCCcEEEECCCHHHHHHHHHHhhCCCeEEEEecCC
Q 010765 53 SPTDVIIVGAGVAGAALAHTLGKDGRRVHVIERDV 87 (502)
Q Consensus 53 ~~~dVvIVGaG~aGl~~A~~La~~G~~v~lvEr~~ 87 (502)
..-.|+|+|+|..|++++..+...|.+|+++++.+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~ 210 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNE 210 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCH
Confidence 34579999999999999988888999999999874
No 500
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=83.48 E-value=1 Score=45.23 Aligned_cols=31 Identities=35% Similarity=0.516 Sum_probs=29.1
Q ss_pred CCcEEEECCCHHHHHHHHHHhhCCC---eEEEEe
Q 010765 54 PTDVIIVGAGVAGAALAHTLGKDGR---RVHVIE 84 (502)
Q Consensus 54 ~~dVvIVGaG~aGl~~A~~La~~G~---~v~lvE 84 (502)
+..|+|+|||-+|.++|..|.+.|. ++.|++
T Consensus 186 ~~rvlvlGAGgAg~aia~~L~~~G~~~~~I~vvd 219 (439)
T 2dvm_A 186 EITLALFGAGAAGFATLRILTEAGVKPENVRVVE 219 (439)
T ss_dssp TCCEEEECCSHHHHHHHHHHHHTTCCGGGEEEEE
T ss_pred CCEEEEECccHHHHHHHHHHHHcCCCcCeEEEEE
Confidence 4589999999999999999999998 899999
Done!