Query 010769
Match_columns 502
No_of_seqs 795 out of 4255
Neff 10.2
Searched_HMMs 29240
Date Mon Mar 25 13:52:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010769.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010769hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 2.7E-44 9.2E-49 349.5 37.7 301 138-483 29-333 (344)
2 4g56_B MGC81050 protein; prote 100.0 5.1E-43 1.7E-47 342.9 36.0 308 137-489 40-351 (357)
3 1vyh_C Platelet-activating fac 100.0 2.6E-42 8.8E-47 344.4 36.3 287 136-480 105-410 (410)
4 3ow8_A WD repeat-containing pr 100.0 3.4E-41 1.2E-45 324.9 35.0 286 136-479 29-319 (321)
5 1got_B GT-beta; complex (GTP-b 100.0 1.2E-40 4.1E-45 324.0 38.1 286 137-478 53-340 (340)
6 3iz6_a 40S ribosomal protein R 100.0 9.5E-41 3.2E-45 329.8 35.5 299 136-484 63-378 (380)
7 2pbi_B Guanine nucleotide-bind 100.0 1.1E-39 3.7E-44 319.0 40.2 290 137-478 62-354 (354)
8 2ynn_A Coatomer subunit beta'; 100.0 4.1E-40 1.4E-44 315.0 35.7 289 137-482 11-303 (304)
9 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.1E-39 3.8E-44 317.7 36.0 306 138-486 14-340 (345)
10 2ynn_A Coatomer subunit beta'; 100.0 1.7E-38 5.8E-43 303.8 35.4 250 194-491 17-269 (304)
11 1erj_A Transcriptional repress 100.0 5.1E-38 1.7E-42 311.7 37.4 299 137-482 62-390 (393)
12 4ery_A WD repeat-containing pr 100.0 8.7E-38 3E-42 299.8 36.3 287 136-480 20-311 (312)
13 3frx_A Guanine nucleotide-bind 100.0 1.1E-37 3.6E-42 300.3 36.6 288 136-482 14-318 (319)
14 1vyh_C Platelet-activating fac 100.0 6.1E-38 2.1E-42 312.8 34.8 250 194-492 112-380 (410)
15 2hes_X YDR267CP; beta-propelle 100.0 7E-38 2.4E-42 303.1 34.1 304 137-481 12-328 (330)
16 3ow8_A WD repeat-containing pr 100.0 2.1E-37 7E-42 298.5 34.2 256 193-492 35-290 (321)
17 2xzm_R RACK1; ribosome, transl 100.0 6.5E-37 2.2E-41 297.9 38.0 289 137-483 19-342 (343)
18 1nr0_A Actin interacting prote 100.0 2.7E-37 9.1E-42 324.1 37.4 293 138-487 17-361 (611)
19 2pm9_A Protein WEB1, protein t 100.0 6.7E-38 2.3E-42 312.5 28.5 301 138-486 11-342 (416)
20 4aez_A CDC20, WD repeat-contai 100.0 2.3E-36 7.9E-41 300.6 36.7 300 137-494 89-393 (401)
21 3i2n_A WD repeat-containing pr 100.0 9.2E-37 3.1E-41 297.6 32.6 296 137-484 16-356 (357)
22 1nr0_A Actin interacting prote 100.0 3E-36 1E-40 316.1 38.4 299 136-484 56-400 (611)
23 3k26_A Polycomb protein EED; W 100.0 6.6E-37 2.3E-41 299.5 31.2 306 136-481 15-366 (366)
24 1got_B GT-beta; complex (GTP-b 100.0 2.9E-36 9.8E-41 293.0 35.0 250 194-492 59-312 (340)
25 1gxr_A ESG1, transducin-like e 100.0 1.6E-35 5.3E-40 286.3 38.8 288 137-480 49-336 (337)
26 2pm9_A Protein WEB1, protein t 100.0 6.5E-37 2.2E-41 305.4 29.1 306 137-482 65-415 (416)
27 2ymu_A WD-40 repeat protein; u 100.0 4.4E-36 1.5E-40 312.7 34.7 278 136-478 300-577 (577)
28 4g56_B MGC81050 protein; prote 100.0 1.2E-36 4E-41 297.7 27.5 252 194-487 46-307 (357)
29 4gqb_B Methylosome protein 50; 100.0 6.6E-36 2.3E-40 290.4 32.5 251 138-438 81-333 (344)
30 2pm7_B Protein transport prote 100.0 1.5E-35 5.1E-40 282.3 33.9 249 194-481 13-285 (297)
31 2pbi_B Guanine nucleotide-bind 100.0 2.2E-35 7.7E-40 288.3 35.1 252 194-492 68-326 (354)
32 3vl1_A 26S proteasome regulato 100.0 3.5E-36 1.2E-40 300.7 29.8 286 140-483 57-367 (420)
33 1r5m_A SIR4-interacting protei 100.0 7.5E-36 2.6E-40 297.9 31.3 290 138-483 44-363 (425)
34 1sq9_A Antiviral protein SKI8; 100.0 7.6E-36 2.6E-40 295.9 30.4 293 136-483 13-397 (397)
35 3ei3_B DNA damage-binding prot 100.0 1.9E-35 6.6E-40 291.9 32.9 289 137-481 71-382 (383)
36 4aow_A Guanine nucleotide-bind 100.0 1.1E-34 3.8E-39 280.9 37.3 295 136-483 35-339 (340)
37 2ymu_A WD-40 repeat protein; u 100.0 5.8E-35 2E-39 304.2 37.2 291 136-492 259-549 (577)
38 1k8k_C P40, ARP2/3 complex 41 100.0 7E-36 2.4E-40 293.2 28.0 294 138-485 7-365 (372)
39 2j04_B YDR362CP, TAU91; beta p 100.0 1.2E-35 4.2E-40 303.2 30.3 311 138-482 132-518 (524)
40 1gxr_A ESG1, transducin-like e 100.0 8.2E-35 2.8E-39 281.2 34.6 292 138-486 8-301 (337)
41 2xyi_A Probable histone-bindin 100.0 1.9E-34 6.5E-39 289.4 38.1 263 188-482 126-411 (430)
42 3iz6_a 40S ribosomal protein R 100.0 6.9E-36 2.4E-40 294.9 26.5 250 194-488 70-336 (380)
43 3zwl_B Eukaryotic translation 100.0 1E-34 3.5E-39 284.0 34.0 289 137-486 30-351 (369)
44 1erj_A Transcriptional repress 100.0 2.7E-34 9.4E-39 284.8 37.4 271 191-492 65-352 (393)
45 4e54_B DNA damage-binding prot 100.0 1.5E-35 5.3E-40 297.9 28.0 290 137-484 117-433 (435)
46 3dm0_A Maltose-binding peripla 100.0 1.5E-34 5.1E-39 308.0 37.1 286 137-481 380-693 (694)
47 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.7E-35 1.9E-39 284.4 30.9 247 194-483 20-285 (345)
48 3odt_A Protein DOA1; ubiquitin 100.0 2E-34 6.8E-39 275.6 34.1 287 136-487 15-302 (313)
49 3dwl_C Actin-related protein 2 100.0 6.9E-36 2.4E-40 294.2 23.9 292 138-479 10-377 (377)
50 4h5i_A Guanine nucleotide-exch 100.0 1.5E-34 5E-39 283.6 32.4 305 141-486 16-348 (365)
51 4ery_A WD repeat-containing pr 100.0 2.6E-34 8.9E-39 275.6 33.1 249 194-492 27-279 (312)
52 4gga_A P55CDC, cell division c 100.0 1.6E-33 5.6E-38 281.8 40.0 289 140-489 106-403 (420)
53 3frx_A Guanine nucleotide-bind 100.0 2E-34 6.9E-39 277.4 32.1 248 194-488 21-274 (319)
54 1r5m_A SIR4-interacting protei 100.0 1.2E-34 3.9E-39 289.3 31.5 298 138-480 107-424 (425)
55 2xzm_R RACK1; ribosome, transl 100.0 6.1E-34 2.1E-38 276.9 32.9 243 207-486 37-290 (343)
56 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-33 4.8E-38 273.2 33.5 255 194-487 15-343 (351)
57 3bg1_A Protein SEC13 homolog; 100.0 4.9E-35 1.7E-39 281.3 22.2 249 194-481 17-293 (316)
58 2hes_X YDR267CP; beta-propelle 100.0 1.6E-33 5.6E-38 272.4 31.1 246 194-483 18-282 (330)
59 3gre_A Serine/threonine-protei 100.0 3.5E-34 1.2E-38 288.0 27.3 303 136-478 60-437 (437)
60 3dw8_B Serine/threonine-protei 100.0 3.2E-33 1.1E-37 281.5 33.3 319 137-480 26-445 (447)
61 4a11_B DNA excision repair pro 100.0 7.2E-33 2.5E-37 274.9 35.4 303 137-488 41-372 (408)
62 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-33 1E-37 303.2 34.2 291 137-484 11-305 (814)
63 3jrp_A Fusion protein of prote 100.0 2.4E-33 8.4E-38 275.4 30.2 250 194-482 15-288 (379)
64 3vl1_A 26S proteasome regulato 100.0 1.8E-33 6.3E-38 281.0 29.4 286 140-481 98-419 (420)
65 4ggc_A P55CDC, cell division c 100.0 8.5E-32 2.9E-36 258.1 38.5 281 142-483 28-317 (318)
66 1yfq_A Cell cycle arrest prote 100.0 6.6E-33 2.3E-37 268.8 31.1 285 137-478 9-321 (342)
67 4e54_B DNA damage-binding prot 100.0 2.9E-33 9.9E-38 281.3 26.7 257 193-493 122-399 (435)
68 3dm0_A Maltose-binding peripla 100.0 1.4E-32 4.9E-37 292.7 33.0 250 194-489 386-640 (694)
69 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-32 5.1E-37 273.1 30.3 295 141-484 36-345 (402)
70 2pm7_B Protein transport prote 100.0 1.8E-32 6E-37 261.0 29.5 255 136-436 6-285 (297)
71 3v7d_B Cell division control p 100.0 3.3E-32 1.1E-36 275.8 32.5 286 138-490 120-430 (464)
72 3sfz_A APAF-1, apoptotic pepti 100.0 2.3E-32 7.8E-37 309.7 34.4 294 136-485 612-1038(1249)
73 2j04_B YDR362CP, TAU91; beta p 100.0 2.6E-33 8.8E-38 286.1 23.9 238 207-482 171-429 (524)
74 2aq5_A Coronin-1A; WD40 repeat 100.0 2.2E-32 7.5E-37 271.9 29.0 245 206-484 43-302 (402)
75 1p22_A F-BOX/WD-repeat protein 100.0 2.4E-32 8.1E-37 274.7 29.5 280 137-487 131-420 (435)
76 3dwl_C Actin-related protein 2 100.0 2E-33 6.9E-38 276.6 20.8 250 193-481 14-281 (377)
77 2oaj_A Protein SNI1; WD40 repe 100.0 1.1E-31 3.7E-36 292.2 35.1 169 138-343 57-244 (902)
78 1k8k_C P40, ARP2/3 complex 41 100.0 4.7E-32 1.6E-36 265.9 29.1 248 194-481 12-274 (372)
79 1sq9_A Antiviral protein SKI8; 100.0 5.1E-32 1.7E-36 268.3 28.6 250 194-489 20-330 (397)
80 3bg1_A Protein SEC13 homolog; 100.0 1.1E-32 3.9E-37 264.7 23.1 254 136-435 10-292 (316)
81 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-31 1.1E-35 267.0 34.5 280 137-488 116-398 (445)
82 1pgu_A Actin interacting prote 100.0 1.5E-31 5.2E-36 280.2 32.8 303 137-491 16-338 (615)
83 3mmy_A MRNA export factor; mRN 100.0 6.4E-32 2.2E-36 264.0 27.8 290 136-482 36-347 (368)
84 3dw8_B Serine/threonine-protei 100.0 6.8E-32 2.3E-36 271.7 28.6 258 193-485 31-377 (447)
85 3zwl_B Eukaryotic translation 100.0 1.1E-30 3.9E-35 255.2 36.3 247 194-491 36-314 (369)
86 4aow_A Guanine nucleotide-bind 100.0 5.5E-31 1.9E-35 254.9 33.3 249 194-488 42-293 (340)
87 2xyi_A Probable histone-bindin 100.0 1E-31 3.6E-36 269.5 28.6 267 137-437 126-411 (430)
88 3mkq_A Coatomer beta'-subunit; 100.0 2.7E-31 9.1E-36 288.0 33.6 249 194-491 17-269 (814)
89 3ei3_B DNA damage-binding prot 100.0 3.7E-31 1.3E-35 261.1 30.9 253 194-491 77-349 (383)
90 3gre_A Serine/threonine-protei 100.0 2.6E-32 9E-37 274.3 20.9 255 193-491 66-369 (437)
91 1yfq_A Cell cycle arrest prote 100.0 3.3E-31 1.1E-35 256.9 27.6 249 193-491 14-292 (342)
92 3sfz_A APAF-1, apoptotic pepti 100.0 2.1E-31 7.3E-36 301.8 30.3 302 136-492 879-1218(1249)
93 4gq1_A NUP37; propeller, trans 100.0 2.2E-31 7.5E-36 263.8 26.2 249 206-481 98-389 (393)
94 2ovr_B FBW7, F-BOX/WD repeat p 100.0 1.6E-30 5.4E-35 262.1 32.7 277 137-482 157-443 (445)
95 3v7d_B Cell division control p 100.0 2.7E-30 9.2E-35 261.7 33.3 232 208-487 131-387 (464)
96 3k26_A Polycomb protein EED; W 100.0 1.5E-31 5E-36 261.5 23.1 261 194-486 22-323 (366)
97 1pgu_A Actin interacting prote 100.0 2.1E-30 7.1E-35 271.6 32.9 281 136-480 60-365 (615)
98 3i2n_A WD repeat-containing pr 100.0 7.2E-31 2.4E-35 255.8 27.4 247 192-484 20-294 (357)
99 3jro_A Fusion protein of prote 100.0 3.1E-31 1.1E-35 284.4 27.1 251 194-483 13-287 (753)
100 4aez_A CDC20, WD repeat-contai 100.0 5.5E-30 1.9E-34 254.5 32.3 234 209-486 103-341 (401)
101 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.1E-29 3.7E-34 256.4 33.4 241 193-481 105-391 (450)
102 3f3f_A Nucleoporin SEH1; struc 100.0 3.9E-30 1.3E-34 249.0 28.8 271 136-438 8-339 (351)
103 3odt_A Protein DOA1; ubiquitin 100.0 8.6E-30 2.9E-34 243.4 29.6 240 194-491 22-265 (313)
104 3vu4_A KMHSV2; beta-propeller 100.0 7.8E-30 2.7E-34 249.1 28.9 284 136-487 16-342 (355)
105 4gga_A P55CDC, cell division c 100.0 8.6E-29 2.9E-33 247.5 37.2 253 193-492 108-364 (420)
106 1p22_A F-BOX/WD-repeat protein 100.0 3.7E-29 1.3E-33 251.3 32.5 224 207-483 141-367 (435)
107 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-29 5.4E-34 245.8 25.4 232 206-484 45-295 (343)
108 2vdu_B TRNA (guanine-N(7)-)-me 100.0 6.3E-29 2.2E-33 250.8 30.6 207 263-482 99-342 (450)
109 2j04_A TAU60, YPL007P, hypothe 100.0 2E-29 7E-34 251.7 26.3 264 138-480 14-296 (588)
110 3lrv_A PRE-mRNA-splicing facto 100.0 5.7E-29 1.9E-33 241.8 28.3 282 143-481 40-333 (343)
111 4a11_B DNA excision repair pro 100.0 2.9E-28 9.8E-33 241.7 33.5 275 193-491 46-333 (408)
112 1l0q_A Surface layer protein; 100.0 3.7E-28 1.3E-32 240.1 33.6 279 152-491 3-285 (391)
113 3jrp_A Fusion protein of prote 100.0 6.8E-29 2.3E-33 243.7 27.5 213 261-483 6-242 (379)
114 3mmy_A MRNA export factor; mRN 100.0 9.9E-29 3.4E-33 241.3 27.9 251 193-491 42-314 (368)
115 3jro_A Fusion protein of prote 100.0 9E-30 3.1E-34 273.0 22.1 257 136-436 6-285 (753)
116 4ggc_A P55CDC, cell division c 100.0 1.5E-27 5.2E-32 228.4 35.4 252 194-492 29-284 (318)
117 2oaj_A Protein SNI1; WD40 repe 100.0 9.8E-29 3.4E-33 268.9 30.1 238 192-479 19-310 (902)
118 3bws_A Protein LP49; two-domai 100.0 6.1E-28 2.1E-32 242.0 33.2 283 140-481 123-432 (433)
119 3bws_A Protein LP49; two-domai 100.0 1.2E-27 3.9E-32 240.0 32.2 301 139-488 60-397 (433)
120 4gq1_A NUP37; propeller, trans 100.0 6.6E-29 2.3E-33 246.0 21.7 297 184-492 9-359 (393)
121 3vu4_A KMHSV2; beta-propeller 100.0 1.6E-27 5.4E-32 232.7 30.3 239 193-483 22-273 (355)
122 4h5i_A Guanine nucleotide-exch 100.0 1.1E-27 3.7E-32 234.8 26.2 260 191-490 15-309 (365)
123 2j04_A TAU60, YPL007P, hypothe 100.0 2.5E-27 8.7E-32 236.6 22.5 237 193-492 18-265 (588)
124 2w18_A PALB2, fancn, partner a 100.0 2.9E-26 9.9E-31 215.4 26.7 196 264-479 134-355 (356)
125 1l0q_A Surface layer protein; 99.9 1.2E-25 4.1E-30 222.1 29.7 238 209-489 2-241 (391)
126 2w18_A PALB2, fancn, partner a 99.9 5.8E-26 2E-30 213.4 23.1 186 208-434 144-355 (356)
127 1nir_A Nitrite reductase; hemo 99.9 2.6E-23 8.7E-28 213.8 30.0 312 142-490 181-523 (543)
128 1nir_A Nitrite reductase; hemo 99.9 4.2E-23 1.4E-27 212.1 30.3 287 145-488 143-465 (543)
129 1ri6_A Putative isomerase YBHE 99.9 2.7E-23 9.2E-28 200.9 27.1 284 151-480 4-307 (343)
130 2hqs_A Protein TOLB; TOLB, PAL 99.9 4.8E-23 1.6E-27 205.2 29.3 231 209-488 143-393 (415)
131 3u4y_A Uncharacterized protein 99.9 2.8E-22 9.4E-27 193.2 31.7 284 145-483 3-306 (331)
132 2ecf_A Dipeptidyl peptidase IV 99.9 1.5E-22 5E-27 217.1 29.6 293 139-481 36-413 (741)
133 2hqs_A Protein TOLB; TOLB, PAL 99.9 9.8E-22 3.3E-26 195.7 32.2 268 138-463 116-411 (415)
134 3hfq_A Uncharacterized protein 99.9 8.9E-21 3E-25 184.1 31.0 291 153-485 4-323 (347)
135 2ojh_A Uncharacterized protein 99.9 1.5E-21 5.1E-26 184.0 23.8 253 167-471 23-293 (297)
136 3vgz_A Uncharacterized protein 99.9 1.6E-20 5.6E-25 182.2 31.4 286 139-470 40-334 (353)
137 2oit_A Nucleoporin 214KDA; NH2 99.9 3.1E-21 1.1E-25 192.9 26.9 218 139-385 36-279 (434)
138 2z3z_A Dipeptidyl aminopeptida 99.9 1.9E-20 6.4E-25 199.6 31.3 296 140-483 82-437 (706)
139 2ojh_A Uncharacterized protein 99.9 3.9E-21 1.3E-25 181.1 22.8 228 214-484 17-261 (297)
140 3scy_A Hypothetical bacterial 99.9 5.7E-20 1.9E-24 179.4 31.5 294 146-484 8-342 (361)
141 1ri6_A Putative isomerase YBHE 99.9 5E-20 1.7E-24 177.8 30.2 278 138-461 36-334 (343)
142 3u4y_A Uncharacterized protein 99.9 1.8E-20 6.1E-25 180.5 26.1 238 208-484 9-255 (331)
143 1xfd_A DIP, dipeptidyl aminope 99.9 8E-21 2.7E-25 203.0 25.3 290 141-482 18-394 (723)
144 1pby_B Quinohemoprotein amine 99.9 2.1E-20 7.2E-25 180.0 25.8 278 152-489 2-318 (337)
145 2oit_A Nucleoporin 214KDA; NH2 99.9 4.4E-21 1.5E-25 191.8 21.3 250 206-481 45-333 (434)
146 3vgz_A Uncharacterized protein 99.9 2.3E-20 8E-25 181.1 25.6 240 206-488 49-310 (353)
147 2ecf_A Dipeptidyl peptidase IV 99.9 4E-20 1.4E-24 198.2 28.4 289 140-482 109-460 (741)
148 1k32_A Tricorn protease; prote 99.9 5.7E-20 2E-24 204.2 28.2 290 137-482 201-503 (1045)
149 1jmx_B Amine dehydrogenase; ox 99.9 1.2E-19 4.1E-24 175.7 25.9 248 203-488 5-332 (349)
150 1k32_A Tricorn protease; prote 99.9 7.9E-20 2.7E-24 203.0 27.5 286 139-483 295-639 (1045)
151 1xfd_A DIP, dipeptidyl aminope 99.9 2.2E-19 7.4E-24 191.9 29.1 306 141-484 62-446 (723)
152 2z3z_A Dipeptidyl aminopeptida 99.8 5.2E-19 1.8E-23 188.5 26.6 281 141-483 27-393 (706)
153 3o4h_A Acylamino-acid-releasin 99.8 4.4E-19 1.5E-23 184.7 24.3 274 139-481 21-315 (582)
154 3hfq_A Uncharacterized protein 99.8 1.6E-17 5.4E-22 161.1 32.4 267 140-441 40-324 (347)
155 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.1E-18 2.8E-22 164.5 26.1 282 153-482 4-342 (365)
156 1pby_B Quinohemoprotein amine 99.8 3.1E-18 1.1E-22 164.7 22.2 234 210-488 2-276 (337)
157 3pe7_A Oligogalacturonate lyas 99.8 8.6E-18 2.9E-22 165.4 25.5 287 142-481 38-382 (388)
158 3scy_A Hypothetical bacterial 99.8 7.5E-17 2.6E-21 157.2 31.9 287 138-458 48-360 (361)
159 3o4h_A Acylamino-acid-releasin 99.8 6.6E-19 2.3E-23 183.4 17.5 227 206-485 30-278 (582)
160 1z68_A Fibroblast activation p 99.8 7.7E-18 2.6E-22 179.8 25.9 299 142-485 62-447 (719)
161 1z68_A Fibroblast activation p 99.8 1.7E-18 5.8E-23 184.9 19.6 282 143-481 19-391 (719)
162 1jmx_B Amine dehydrogenase; ox 99.8 2.5E-16 8.6E-21 152.2 26.4 238 144-439 4-328 (349)
163 3c5m_A Oligogalacturonate lyas 99.7 1.2E-16 4E-21 157.4 22.5 300 140-480 36-381 (396)
164 1q7f_A NHL, brain tumor CG1071 99.7 5.7E-15 2E-19 138.8 30.0 237 206-484 38-283 (286)
165 3pe7_A Oligogalacturonate lyas 99.7 1.6E-15 5.3E-20 149.2 26.7 242 203-484 41-332 (388)
166 3fvz_A Peptidyl-glycine alpha- 99.7 3.5E-15 1.2E-19 143.5 28.1 202 264-482 88-323 (329)
167 1jof_A Carboxy-CIS,CIS-muconat 99.7 6.6E-15 2.2E-19 143.8 29.5 249 140-438 40-343 (365)
168 4a5s_A Dipeptidyl peptidase 4 99.7 4.9E-16 1.7E-20 166.2 20.9 242 206-484 25-356 (740)
169 4a5s_A Dipeptidyl peptidase 4 99.7 4E-15 1.4E-19 159.2 27.6 287 141-479 18-396 (740)
170 3azo_A Aminopeptidase; POP fam 99.7 2.8E-15 9.4E-20 158.4 26.0 297 138-484 22-372 (662)
171 2oiz_A Aromatic amine dehydrog 99.7 1.3E-14 4.6E-19 141.2 28.3 271 167-488 32-343 (361)
172 2xdw_A Prolyl endopeptidase; a 99.7 4E-14 1.4E-18 150.7 32.1 289 149-483 81-416 (710)
173 2dg1_A DRP35, lactonase; beta 99.7 1.2E-13 4.1E-18 132.8 31.5 268 141-470 7-300 (333)
174 1rwi_B Serine/threonine-protei 99.7 5.8E-14 2E-18 130.6 26.1 235 206-484 32-267 (270)
175 3fvz_A Peptidyl-glycine alpha- 99.6 2.7E-14 9.4E-19 137.2 24.3 257 140-436 24-322 (329)
176 2oiz_A Aromatic amine dehydrog 99.6 9E-14 3.1E-18 135.3 28.1 263 144-462 54-360 (361)
177 2bkl_A Prolyl endopeptidase; m 99.6 4.5E-14 1.5E-18 149.9 27.9 284 148-484 76-400 (695)
178 2gop_A Trilobed protease; beta 99.6 8.5E-14 2.9E-18 134.5 27.3 264 140-480 15-330 (347)
179 3c5m_A Oligogalacturonate lyas 99.6 5.7E-15 2E-19 145.3 18.0 234 203-484 41-332 (396)
180 2z2n_A Virginiamycin B lyase; 99.6 2.4E-12 8.2E-17 121.2 34.9 281 139-482 14-296 (299)
181 1q7f_A NHL, brain tumor CG1071 99.6 6.7E-13 2.3E-17 124.6 28.0 242 138-438 28-282 (286)
182 1qks_A Cytochrome CD1 nitrite 99.6 5.3E-13 1.8E-17 136.8 28.5 311 141-489 198-546 (567)
183 3azo_A Aminopeptidase; POP fam 99.6 5.5E-14 1.9E-18 148.4 20.4 249 144-439 81-372 (662)
184 3e5z_A Putative gluconolactona 99.6 4.3E-13 1.5E-17 126.7 23.7 227 206-483 36-288 (296)
185 1pjx_A Dfpase, DIISOPROPYLFLUO 99.6 2.8E-12 9.5E-17 121.9 28.2 248 193-482 20-300 (314)
186 2dg1_A DRP35, lactonase; beta 99.6 9.4E-13 3.2E-17 126.5 24.6 236 205-486 13-267 (333)
187 1qks_A Cytochrome CD1 nitrite 99.6 5.8E-12 2E-16 129.1 31.7 279 149-482 165-478 (567)
188 2xdw_A Prolyl endopeptidase; a 99.5 3.3E-12 1.1E-16 135.9 30.5 254 138-438 123-416 (710)
189 1rwi_B Serine/threonine-protei 99.5 1.4E-12 4.8E-17 121.1 24.0 241 141-438 25-266 (270)
190 3dsm_A Uncharacterized protein 99.5 1.1E-12 3.7E-17 126.0 23.5 235 208-488 53-308 (328)
191 3no2_A Uncharacterized protein 99.5 3.1E-12 1.1E-16 119.3 25.8 211 208-468 4-230 (276)
192 1yr2_A Prolyl oligopeptidase; 99.5 4.5E-12 1.5E-16 135.5 27.4 288 148-483 115-443 (741)
193 2qc5_A Streptogramin B lactona 99.5 5.4E-11 1.8E-15 111.9 31.5 277 140-479 20-298 (300)
194 2mad_H Methylamine dehydrogena 99.5 7.1E-11 2.4E-15 115.1 32.6 292 146-488 27-357 (373)
195 3e5z_A Putative gluconolactona 99.5 5.7E-12 1.9E-16 118.9 24.2 204 264-487 25-251 (296)
196 2gop_A Trilobed protease; beta 99.5 2E-12 6.7E-17 124.9 21.3 230 140-438 59-332 (347)
197 2z2n_A Virginiamycin B lyase; 99.5 7.1E-11 2.4E-15 111.0 30.2 229 206-479 23-253 (299)
198 3sjl_D Methylamine dehydrogena 99.5 3.4E-11 1.2E-15 116.1 27.4 295 145-489 38-371 (386)
199 2bkl_A Prolyl endopeptidase; m 99.5 7E-12 2.4E-16 133.0 24.1 257 137-442 118-403 (695)
200 3dsm_A Uncharacterized protein 99.4 1.8E-11 6E-16 117.4 23.5 198 267-486 44-258 (328)
201 3no2_A Uncharacterized protein 99.4 1.4E-11 4.9E-16 114.8 20.9 188 280-489 6-203 (276)
202 3g4e_A Regucalcin; six bladed 99.4 8.8E-11 3E-15 110.9 26.5 226 206-471 21-263 (297)
203 3hrp_A Uncharacterized protein 99.4 5.1E-11 1.8E-15 117.7 25.4 230 206-479 139-408 (409)
204 1xip_A Nucleoporin NUP159; bet 99.4 9.5E-12 3.3E-16 120.4 18.5 173 268-467 39-231 (388)
205 2qc5_A Streptogramin B lactona 99.4 9.5E-10 3.2E-14 103.3 30.7 229 206-479 28-258 (300)
206 1xip_A Nucleoporin NUP159; bet 99.4 5.9E-11 2E-15 114.9 22.1 175 206-423 46-231 (388)
207 3c75_H MADH, methylamine dehyd 99.4 1.8E-10 6.3E-15 113.0 24.6 293 149-488 82-409 (426)
208 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 5.1E-10 1.7E-14 106.1 26.0 243 141-436 19-299 (314)
209 1yr2_A Prolyl oligopeptidase; 99.3 2.4E-10 8.2E-15 122.1 25.9 249 140-438 163-443 (741)
210 3iuj_A Prolyl endopeptidase; h 99.3 1.9E-10 6.6E-15 121.8 22.8 236 206-483 137-407 (693)
211 2ghs_A AGR_C_1268P; regucalcin 99.3 3.3E-09 1.1E-13 101.4 28.3 223 206-472 57-294 (326)
212 3iuj_A Prolyl endopeptidase; h 99.3 1E-09 3.4E-14 116.3 26.5 254 138-441 127-410 (693)
213 2qe8_A Uncharacterized protein 99.2 4.3E-10 1.5E-14 108.5 20.2 282 141-477 18-317 (343)
214 3hrp_A Uncharacterized protein 99.2 6E-09 2.1E-13 102.8 27.8 239 140-434 131-408 (409)
215 2mad_H Methylamine dehydrogena 99.2 1.7E-08 5.8E-13 98.2 30.1 241 144-439 70-353 (373)
216 3g4e_A Regucalcin; six bladed 99.2 5.5E-09 1.9E-13 98.4 25.4 208 265-488 11-236 (297)
217 3sjl_D Methylamine dehydrogena 99.2 5.9E-09 2E-13 100.5 25.2 259 144-460 82-384 (386)
218 1mda_H Methylamine dehydrogena 99.2 9.4E-10 3.2E-14 106.1 17.9 266 167-489 47-354 (368)
219 1npe_A Nidogen, entactin; glyc 99.1 6.6E-08 2.3E-12 89.4 27.0 207 267-489 36-246 (267)
220 2ghs_A AGR_C_1268P; regucalcin 99.1 3.5E-08 1.2E-12 94.2 24.6 197 269-486 51-264 (326)
221 3dr2_A Exported gluconolactona 99.1 2.5E-08 8.6E-13 94.2 22.7 223 206-478 53-303 (305)
222 3c75_H MADH, methylamine dehyd 99.1 3.9E-08 1.3E-12 96.5 24.3 242 144-439 122-405 (426)
223 2ece_A 462AA long hypothetical 99.0 1.9E-07 6.7E-12 90.6 27.3 232 207-468 93-399 (462)
224 3dr2_A Exported gluconolactona 99.0 3.8E-08 1.3E-12 93.0 21.7 225 141-427 46-298 (305)
225 2hz6_A Endoplasmic reticulum t 99.0 6E-11 2E-15 115.6 1.5 184 279-487 9-198 (369)
226 1fwx_A Nitrous oxide reductase 99.0 1.5E-08 5.1E-13 101.9 17.6 247 207-483 99-433 (595)
227 2hz6_A Endoplasmic reticulum t 99.0 2.3E-10 7.7E-15 111.5 4.3 204 208-462 8-216 (369)
228 1kb0_A Quinohemoprotein alcoho 98.9 8.4E-08 2.9E-12 100.8 23.2 242 208-489 127-515 (677)
229 1yiq_A Quinohemoprotein alcoho 98.9 6E-08 2E-12 102.2 21.6 243 208-489 120-513 (689)
230 1npe_A Nidogen, entactin; glyc 98.9 1.5E-06 5.2E-11 80.1 28.4 216 206-462 44-263 (267)
231 1mda_H Methylamine dehydrogena 98.9 7.3E-08 2.5E-12 92.9 18.8 251 144-459 69-366 (368)
232 1fwx_A Nitrous oxide reductase 98.9 1.1E-07 3.9E-12 95.5 20.6 255 212-481 18-361 (595)
233 1ijq_A LDL receptor, low-densi 98.9 4.1E-06 1.4E-10 79.3 30.4 211 267-489 30-246 (316)
234 3q7m_A Lipoprotein YFGL, BAMB; 98.9 1.2E-06 4.1E-11 85.2 26.6 223 209-478 143-375 (376)
235 1yiq_A Quinohemoprotein alcoho 98.9 6.5E-07 2.2E-11 94.2 26.0 184 270-468 238-536 (689)
236 2iwa_A Glutamine cyclotransfer 98.8 4.8E-07 1.6E-11 82.5 21.1 198 268-483 22-239 (266)
237 3q7m_A Lipoprotein YFGL, BAMB; 98.8 2.6E-06 8.9E-11 82.8 27.9 228 208-488 102-344 (376)
238 1kb0_A Quinohemoprotein alcoho 98.8 9.5E-07 3.2E-11 92.8 26.0 201 268-483 244-569 (677)
239 3hxj_A Pyrrolo-quinoline quino 98.8 2.7E-07 9.1E-12 87.8 20.0 218 209-481 107-324 (330)
240 2ece_A 462AA long hypothetical 98.8 1E-07 3.5E-12 92.5 16.8 199 270-481 85-352 (462)
241 3v65_B Low-density lipoprotein 98.8 4.7E-06 1.6E-10 81.3 28.1 210 267-489 116-326 (386)
242 2qe8_A Uncharacterized protein 98.8 1E-07 3.6E-12 91.6 15.6 212 267-483 17-280 (343)
243 3p5b_L Low density lipoprotein 98.8 1.5E-05 5.3E-10 78.0 30.4 212 266-488 111-327 (400)
244 3v64_C Agrin; beta propeller, 98.7 1.6E-05 5.5E-10 76.3 28.9 208 267-488 73-282 (349)
245 2fp8_A Strictosidine synthase; 98.7 6.2E-06 2.1E-10 78.3 25.5 258 193-481 21-313 (322)
246 2p4o_A Hypothetical protein; p 98.7 1.4E-05 4.9E-10 75.1 27.1 231 190-469 31-277 (306)
247 3hxj_A Pyrrolo-quinoline quino 98.7 1.1E-06 3.7E-11 83.5 18.8 180 281-486 109-288 (330)
248 2iwa_A Glutamine cyclotransfer 98.6 4.6E-06 1.6E-10 76.0 20.8 198 191-437 21-238 (266)
249 3nol_A Glutamine cyclotransfer 98.6 9.3E-06 3.2E-10 73.2 21.2 182 269-468 45-243 (262)
250 3qqz_A Putative uncharacterize 98.6 9.1E-05 3.1E-09 67.0 27.7 204 264-479 24-251 (255)
251 3nok_A Glutaminyl cyclase; bet 98.6 6.3E-06 2.2E-10 74.2 19.6 180 268-468 56-253 (268)
252 1kv9_A Type II quinohemoprotei 98.6 2.4E-06 8E-11 89.7 19.4 242 208-489 116-496 (668)
253 3m0c_C LDL receptor, low-densi 98.6 6.1E-05 2.1E-09 79.9 30.3 212 266-488 423-639 (791)
254 1k3i_A Galactose oxidase precu 98.6 5E-06 1.7E-10 87.3 21.5 277 144-470 190-530 (656)
255 4a2l_A BT_4663, two-component 98.6 0.00017 5.9E-09 77.4 33.8 198 266-484 262-483 (795)
256 3mbr_X Glutamine cyclotransfer 98.5 2.7E-05 9.2E-10 69.5 22.1 183 267-468 21-222 (243)
257 3sov_A LRP-6, low-density lipo 98.5 9.4E-05 3.2E-09 69.9 27.3 208 267-488 35-245 (318)
258 3v64_C Agrin; beta propeller, 98.5 0.0002 6.9E-09 68.6 29.7 241 141-438 35-277 (349)
259 4a2l_A BT_4663, two-component 98.5 0.00015 5.1E-09 77.9 30.9 279 142-484 133-439 (795)
260 1n7d_A LDL receptor, low-densi 98.5 1.6E-06 5.6E-11 91.2 14.5 211 267-488 406-621 (699)
261 3v65_B Low-density lipoprotein 98.4 0.00015 5E-09 70.7 27.3 202 192-438 117-320 (386)
262 2fp8_A Strictosidine synthase; 98.4 8E-05 2.7E-09 70.5 23.5 242 141-438 20-315 (322)
263 2ad6_A Methanol dehydrogenase 98.4 8.2E-05 2.8E-09 76.4 25.0 242 208-489 114-502 (571)
264 2xe4_A Oligopeptidase B; hydro 98.4 0.00024 8.3E-09 75.6 29.3 254 141-442 175-464 (751)
265 1w6s_A Methanol dehydrogenase 98.3 9.2E-05 3.1E-09 76.1 23.7 59 426-488 452-510 (599)
266 1kv9_A Type II quinohemoprotei 98.3 6.9E-05 2.4E-09 78.5 23.0 161 267-440 230-492 (668)
267 1ijq_A LDL receptor, low-densi 98.3 0.00032 1.1E-08 66.2 25.2 181 289-481 10-195 (316)
268 3nol_A Glutamine cyclotransfer 98.3 1.8E-05 6E-10 71.4 14.4 169 300-489 32-209 (262)
269 3nok_A Glutaminyl cyclase; bet 98.3 3E-05 1E-09 69.8 15.9 168 300-489 44-218 (268)
270 3v9f_A Two-component system se 98.3 0.00075 2.6E-08 72.2 29.8 198 266-483 362-570 (781)
271 1k3i_A Galactose oxidase precu 98.3 2.1E-05 7.2E-10 82.5 17.2 203 268-483 244-499 (656)
272 1flg_A Protein (quinoprotein e 98.2 0.00048 1.7E-08 70.7 26.7 60 426-489 465-524 (582)
273 2p4o_A Hypothetical protein; p 98.2 0.00032 1.1E-08 65.8 23.4 226 141-424 33-277 (306)
274 3v9f_A Two-component system se 98.2 0.0037 1.3E-07 66.8 33.9 204 267-483 163-394 (781)
275 3tc9_A Hypothetical hydrolase; 98.2 0.00031 1E-08 69.4 22.6 205 266-480 178-429 (430)
276 4a0p_A LRP6, LRP-6, low-densit 98.2 0.0025 8.4E-08 66.0 30.0 207 267-488 37-244 (628)
277 2xe4_A Oligopeptidase B; hydro 98.1 8.8E-05 3E-09 79.0 18.6 197 268-479 175-398 (751)
278 2ad6_A Methanol dehydrogenase 98.1 0.0014 4.8E-08 67.2 26.7 164 290-469 273-526 (571)
279 3sov_A LRP-6, low-density lipo 98.1 0.0031 1.1E-07 59.4 26.7 203 193-439 37-241 (318)
280 3p5b_L Low density lipoprotein 98.1 0.0016 5.5E-08 63.5 25.3 189 281-482 85-278 (400)
281 4hw6_A Hypothetical protein, I 98.1 0.0011 3.6E-08 65.6 24.0 205 266-480 181-432 (433)
282 3amr_A 3-phytase; beta-propell 98.1 0.00073 2.5E-08 63.5 21.3 195 279-480 40-262 (355)
283 1flg_A Protein (quinoprotein e 98.0 0.0026 8.9E-08 65.3 26.8 164 289-467 291-546 (582)
284 3mbr_X Glutamine cyclotransfer 98.0 0.00042 1.4E-08 61.8 17.9 169 300-489 10-187 (243)
285 4hw6_A Hypothetical protein, I 98.0 0.0013 4.4E-08 65.0 23.0 208 267-489 139-380 (433)
286 3s94_A LRP-6, low-density lipo 98.0 0.0025 8.6E-08 65.8 25.3 210 266-488 39-250 (619)
287 3tc9_A Hypothetical hydrolase; 97.9 0.0013 4.4E-08 64.9 21.9 159 267-436 137-301 (430)
288 3kya_A Putative phosphatase; s 97.9 0.0026 9E-08 63.1 23.5 213 267-488 186-482 (496)
289 3m0c_C LDL receptor, low-densi 97.9 0.0041 1.4E-07 65.9 26.2 161 267-438 471-634 (791)
290 3kya_A Putative phosphatase; s 97.9 0.004 1.4E-07 61.8 23.6 218 268-490 140-417 (496)
291 1n7d_A LDL receptor, low-densi 97.8 0.00017 5.8E-09 75.8 14.4 162 268-438 454-616 (699)
292 2ism_A Putative oxidoreductase 97.7 0.016 5.4E-07 55.4 25.2 238 192-468 32-332 (352)
293 2p9w_A MAL S 1 allergenic prot 97.7 0.011 3.8E-07 55.0 22.8 204 267-481 13-265 (334)
294 2xbg_A YCF48-like protein; pho 97.7 0.034 1.2E-06 52.3 27.2 195 267-479 122-320 (327)
295 3qqz_A Putative uncharacterize 97.6 0.0068 2.3E-07 54.7 19.6 169 304-482 21-205 (255)
296 2g8s_A Glucose/sorbosone dehyd 97.6 0.051 1.8E-06 51.8 27.6 243 193-467 20-339 (353)
297 1w6s_A Methanol dehydrogenase 97.6 0.0043 1.5E-07 63.7 19.9 192 281-487 64-348 (599)
298 3s94_A LRP-6, low-density lipo 97.6 0.061 2.1E-06 55.4 28.5 203 267-482 349-552 (619)
299 3ei3_A DNA damage-binding prot 97.6 0.071 2.4E-06 59.1 30.4 291 139-486 553-918 (1158)
300 4a0p_A LRP6, LRP-6, low-densit 97.5 0.044 1.5E-06 56.6 26.9 207 267-486 340-554 (628)
301 2xzh_A Clathrin heavy chain 1; 97.5 0.059 2E-06 49.8 24.8 198 272-486 72-295 (365)
302 1bpo_A Protein (clathrin); cla 97.4 0.092 3.1E-06 50.5 24.7 199 271-486 70-294 (494)
303 3amr_A 3-phytase; beta-propell 97.4 0.034 1.2E-06 52.2 21.5 146 288-439 98-267 (355)
304 2xzh_A Clathrin heavy chain 1; 97.4 0.089 3E-06 48.6 28.0 246 206-488 75-339 (365)
305 2vpj_A Kelch-like protein 12; 97.3 0.011 3.7E-07 54.9 17.5 185 279-483 63-280 (301)
306 2p9w_A MAL S 1 allergenic prot 97.3 0.015 5.1E-07 54.2 17.5 164 306-481 9-215 (334)
307 2vpj_A Kelch-like protein 12; 97.3 0.027 9.3E-07 52.1 19.7 148 279-442 113-284 (301)
308 1bpo_A Protein (clathrin); cla 97.2 0.16 5.4E-06 48.9 29.2 244 206-487 74-337 (494)
309 3ii7_A Kelch-like protein 7; p 97.2 0.029 1E-06 52.1 19.1 186 279-483 56-274 (306)
310 2xn4_A Kelch-like protein 2; s 97.1 0.019 6.4E-07 53.3 16.9 186 279-483 62-278 (302)
311 2xbg_A YCF48-like protein; pho 97.1 0.19 6.4E-06 47.2 25.3 151 265-434 161-320 (327)
312 3ii7_A Kelch-like protein 7; p 97.1 0.048 1.6E-06 50.6 19.3 150 279-444 102-280 (306)
313 3ei3_A DNA damage-binding prot 97.1 0.56 1.9E-05 52.0 31.2 192 185-416 548-748 (1158)
314 1zgk_A Kelch-like ECH-associat 97.1 0.016 5.6E-07 54.0 15.9 186 279-483 71-289 (308)
315 3a9g_A Putative uncharacterize 97.0 0.25 8.4E-06 47.0 25.9 198 267-469 73-330 (354)
316 1xi4_A Clathrin heavy chain; a 96.9 0.26 8.9E-06 54.6 25.3 244 206-487 74-337 (1630)
317 3sre_A PON1, serum paraoxonase 96.9 0.13 4.3E-06 48.9 20.1 183 267-462 112-326 (355)
318 3sre_A PON1, serum paraoxonase 96.7 0.3 1E-05 46.2 21.6 187 268-471 51-287 (355)
319 4asc_A Kelch repeat and BTB do 96.6 0.1 3.4E-06 48.7 17.7 186 279-483 46-279 (315)
320 1zgk_A Kelch-like ECH-associat 96.6 0.24 8.1E-06 45.9 19.9 148 279-442 122-293 (308)
321 3pbp_A Nucleoporin NUP82; beta 96.5 0.21 7.2E-06 48.0 18.2 142 288-432 40-208 (452)
322 2xn4_A Kelch-like protein 2; s 96.4 0.46 1.6E-05 43.7 20.7 145 279-439 109-279 (302)
323 3das_A Putative oxidoreductase 96.4 0.69 2.3E-05 43.6 25.8 248 193-472 34-330 (347)
324 2ism_A Putative oxidoreductase 96.2 0.4 1.4E-05 45.5 19.2 64 354-423 269-332 (352)
325 1tl2_A L10, protein (tachylect 96.1 0.16 5.4E-06 44.2 14.0 185 279-482 4-209 (236)
326 3pbp_A Nucleoporin NUP82; beta 96.1 0.58 2E-05 45.0 19.0 121 354-477 67-208 (452)
327 1xi4_A Clathrin heavy chain; a 96.0 0.52 1.8E-05 52.3 20.6 197 273-486 72-294 (1630)
328 2uvk_A YJHT; unknown function, 95.9 0.29 9.8E-06 46.4 16.7 57 428-487 286-348 (357)
329 4asc_A Kelch repeat and BTB do 95.7 1.3 4.5E-05 40.9 20.6 101 279-385 99-222 (315)
330 2woz_A Kelch repeat and BTB do 95.6 0.51 1.7E-05 43.8 16.9 185 279-483 57-289 (318)
331 3ott_A Two-component system se 95.5 3.1 0.0001 43.9 30.5 185 268-477 104-303 (758)
332 3ott_A Two-component system se 95.2 3.8 0.00013 43.1 24.3 190 267-483 63-262 (758)
333 2uvk_A YJHT; unknown function, 95.2 0.79 2.7E-05 43.2 16.8 60 376-445 286-351 (357)
334 2zwa_A Leucine carboxyl methyl 94.7 0.53 1.8E-05 49.2 15.1 193 279-483 398-637 (695)
335 2be1_A Serine/threonine-protei 94.4 0.098 3.4E-06 49.2 7.7 194 280-486 11-236 (339)
336 3sbq_A Nitrous-oxide reductase 94.2 5.1 0.00017 40.0 22.7 261 212-482 73-409 (638)
337 1cru_A Protein (soluble quinop 93.9 4.1 0.00014 40.0 18.7 110 310-424 27-162 (454)
338 2woz_A Kelch repeat and BTB do 93.8 1.3 4.5E-05 40.9 14.6 182 281-483 18-233 (318)
339 1tl2_A L10, protein (tachylect 93.6 0.76 2.6E-05 39.9 11.1 103 267-379 41-158 (236)
340 2be1_A Serine/threonine-protei 93.6 4.8 0.00016 37.6 18.6 103 280-385 112-232 (339)
341 3s25_A Hypothetical 7-bladed b 93.6 4.4 0.00015 37.2 20.1 174 273-478 110-290 (302)
342 1cru_A Protein (soluble quinop 93.5 6.2 0.00021 38.6 30.6 58 418-475 370-430 (454)
343 2zwa_A Leucine carboxyl methyl 93.2 2.9 0.0001 43.6 17.3 105 279-385 501-636 (695)
344 3a9g_A Putative uncharacterize 93.1 6 0.0002 37.3 21.0 209 267-482 29-297 (354)
345 3b7f_A Glycosyl hydrolase, BNR 91.3 10 0.00035 36.1 24.7 181 267-460 55-288 (394)
346 3b7f_A Glycosyl hydrolase, BNR 91.3 10 0.00035 36.0 19.7 99 280-380 23-143 (394)
347 2g8s_A Glucose/sorbosone dehyd 90.5 11 0.00039 35.2 21.4 60 353-422 271-339 (353)
348 3s25_A Hypothetical 7-bladed b 89.3 12 0.00041 34.3 15.2 176 276-481 23-216 (302)
349 3q6k_A 43.2 kDa salivary prote 88.5 17 0.00058 34.4 23.1 171 290-469 124-342 (381)
350 3qhy_B Beta-lactamase inhibito 88.1 15 0.0005 33.2 21.3 186 268-484 64-249 (282)
351 1sqj_A OXG-RCBH, oligoxylogluc 87.9 30 0.001 36.5 22.1 150 266-426 14-190 (789)
352 3sbq_A Nitrous-oxide reductase 87.3 6.2 0.00021 39.4 12.1 103 333-436 299-408 (638)
353 2ca6_A RAN GTPase-activating p 84.4 0.34 1.2E-05 46.5 1.8 15 26-40 323-337 (386)
354 2cn3_A Xyloglucanase, beta-1,4 83.6 46 0.0016 34.7 22.7 106 268-374 24-153 (737)
355 2wg3_C Hedgehog-interacting pr 82.8 37 0.0013 33.1 30.0 74 395-469 265-354 (463)
356 2wg3_C Hedgehog-interacting pr 82.7 38 0.0013 33.1 15.7 113 353-472 14-160 (463)
357 4gq2_M Nucleoporin NUP120; bet 82.2 15 0.00051 39.8 13.7 39 267-306 236-274 (950)
358 4hvt_A Ritya.17583.B, post-pro 81.7 53 0.0018 34.1 21.4 234 205-483 137-431 (711)
359 1sqj_A OXG-RCBH, oligoxylogluc 80.3 34 0.0012 36.1 15.5 154 309-471 14-190 (789)
360 4fhn_B Nucleoporin NUP120; pro 74.1 27 0.00091 38.7 12.9 39 267-306 238-276 (1139)
361 2zux_A YESW protein; beta-prop 73.5 77 0.0026 31.6 24.1 180 264-462 176-426 (591)
362 4gq2_M Nucleoporin NUP120; bet 71.3 39 0.0013 36.5 13.1 33 406-439 237-269 (950)
363 2cn3_A Xyloglucanase, beta-1,4 69.7 80 0.0027 32.9 14.8 109 310-426 23-153 (737)
364 3das_A Putative oxidoreductase 68.3 77 0.0026 29.5 23.4 209 267-482 32-293 (347)
365 4b1v_M Phosphatase and actin r 65.5 1.9 6.4E-05 23.4 0.6 12 7-18 21-32 (32)
366 3a0f_A Xyloglucanase; beta-pro 62.2 1.5E+02 0.0053 30.8 16.7 156 308-472 19-203 (763)
367 3a0f_A Xyloglucanase; beta-pro 59.8 1.7E+02 0.0058 30.5 23.2 156 264-427 18-203 (763)
368 3l6v_A GYRA, DNA gyrase subuni 56.4 1.3E+02 0.0045 28.2 23.6 72 267-340 99-179 (370)
369 3no0_A DNA gyrase subunit A; D 55.9 1.1E+02 0.0038 27.2 21.1 210 266-483 23-248 (276)
370 4fp9_B Mterf domain-containing 51.9 3.7 0.00013 38.3 0.5 9 10-18 225-233 (335)
371 3f7f_A Nucleoporin NUP120; nuc 49.8 23 0.0008 36.5 6.0 38 267-307 222-259 (729)
372 2zuy_A YESX protein; beta-prop 47.2 2.3E+02 0.008 28.4 23.8 183 264-462 180-430 (620)
373 1suu_A DNA gyrase subunit A; t 46.5 1.7E+02 0.0058 26.5 25.7 206 207-436 6-231 (312)
374 3uc1_A DNA gyrase subunit A; D 46.1 1.8E+02 0.0061 26.7 21.1 166 267-436 95-279 (327)
375 2m0n_A Putative uncharacterize 45.5 17 0.00058 27.3 3.1 33 4-37 13-55 (112)
376 4fhn_B Nucleoporin NUP120; pro 43.5 42 0.0015 37.1 7.5 33 406-439 239-271 (1139)
377 3f7f_A Nucleoporin NUP120; nuc 40.5 1.1E+02 0.0037 31.6 9.2 38 405-445 222-259 (729)
378 3zwu_A Alkaline phosphatase PH 38.5 1.1E+02 0.0036 31.0 8.8 59 407-467 478-548 (592)
379 1zi0_A DNA gyrase subunit A; b 37.2 2.3E+02 0.008 25.5 23.9 166 267-436 95-277 (307)
380 3l6v_A GYRA, DNA gyrase subuni 35.0 2.8E+02 0.0097 25.8 26.4 250 207-480 5-315 (370)
381 2lky_A Uncharacterized protein 34.7 7.5 0.00026 29.2 -0.2 33 4-37 13-55 (112)
382 2kvc_A Putative uncharacterize 33.8 7.6 0.00026 28.7 -0.3 33 3-36 10-52 (103)
383 1suu_A DNA gyrase subunit A; t 32.1 2.9E+02 0.0098 25.0 22.6 104 279-385 114-232 (312)
384 4a9v_A PHOX; hydrolase, beta-p 32.0 1.9E+02 0.0064 29.0 9.1 65 406-472 477-553 (592)
385 3ol3_A Putative uncharacterize 31.1 8.5 0.00029 28.7 -0.4 33 3-36 15-57 (107)
386 3qhy_B Beta-lactamase inhibito 27.4 3.2E+02 0.011 24.1 25.7 165 267-462 102-266 (282)
387 4fp9_B Mterf domain-containing 27.1 8.3 0.00029 35.8 -1.4 7 24-30 263-269 (335)
388 3no0_A DNA gyrase subunit A; D 24.1 3.7E+02 0.013 23.7 18.7 163 266-436 67-246 (276)
389 3q6k_A 43.2 kDa salivary prote 23.9 4.5E+02 0.015 24.6 21.1 117 267-384 152-306 (381)
390 3nzj_F Proteasome component C1 22.0 33 0.0011 31.0 1.6 34 5-42 216-249 (288)
391 1wp5_A Topoisomerase IV; broke 20.7 4.8E+02 0.016 23.7 24.7 246 207-481 3-277 (323)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.7e-44 Score=349.53 Aligned_cols=301 Identities=20% Similarity=0.243 Sum_probs=238.9
Q ss_pred CccccccccccCCCceEEEEEecCCcc--eeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVS--HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~--~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
+...|.++.|+|+|++|++++ ++.+. ...++.|.........-.............+++| +|+ +.|++|
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------s~d-~~l~~~ 99 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTW-------VGE-RGILVA 99 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEE-------ETT-TEEEEE
T ss_pred ccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEE-------eCC-CeEEEE
Confidence 566799999999999999887 43221 1234455432221101000111111223467777 566 478899
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.||.|+|||+.+.+.... ......+|.+.|++|+|+|+ +.+|++|+.|++|++||
T Consensus 100 s~dg~v~lWd~~~~~~~~~-----------------------~~~~~~~H~~~V~~v~~spd-g~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 100 SDSGAVELWELDENETLIV-----------------------SKFCKYEHDDIVSTVSVLSS-GTQAVSGSKDICIKVWD 155 (344)
T ss_dssp ETTSEEEEEEECTTSSCEE-----------------------EEEEEECCSSCEEEEEECTT-SSEEEEEETTSCEEEEE
T ss_pred ECCCEEEEEeccCCCceeE-----------------------eeccccCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEE
Confidence 9999999999986543321 12234589999999999999 56999999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce--EeecCCeEEEEeCCCCCCEEEEEeC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v~~v~~~p~~~~~l~~~~~ 373 (502)
+.+++++.++.+|...|++++|++++..+|++++.|++|++||+++++..... ..+...+.+++|+|.+..++++|+.
T Consensus 156 ~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~ 235 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE 235 (344)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEET
T ss_pred CCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEecc
Confidence 99999999999999999999999998778999999999999999988765433 2345578999999988889999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEE
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
||.|++||+++. +++..+.+|...|++++|+|++..+|++|+.|++|+|||+.+++ +....+|.+.|+
T Consensus 236 dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~---~~~~~~H~~~V~ 303 (344)
T 4gqb_B 236 NGTVSLVDTKST---------SCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSE---LFRSQAHRDFVR 303 (344)
T ss_dssp TSEEEEEESCC-----------CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCE---EEEECCCSSCEE
T ss_pred CCcEEEEECCCC---------cEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCc---EEEEcCCCCCEE
Confidence 999999999986 77889999999999999999987789999999999999999886 445688999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 454 SVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 454 ~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
+++|+|+++++|++||.||+|++|++.+..
T Consensus 304 ~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 304 DATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 999999998889999999999999997754
No 2
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=5.1e-43 Score=342.87 Aligned_cols=308 Identities=19% Similarity=0.236 Sum_probs=234.7
Q ss_pred CCccccccccccCCCceEEEEEecCCc-ceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDV-SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~-~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
.|+..|.+++|+|+|++||+|+.+... --..|++|+......................|++| +|++.+ +++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~-------s~d~~~-l~~ 111 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAW-------VSEKGI-LVA 111 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEE-------ETTTEE-EEE
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEE-------cCCCCE-EEE
Confidence 488899999999999999999864310 01256777654432111111000111122368888 577765 456
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.+|.|+|||+....... .......+|...|++|+|+|+ +.+|++|+.|++|++||
T Consensus 112 s~dg~v~lWd~~~~~~~~-----------------------~~~~~~~~h~~~V~~v~~spd-g~~l~sgs~dg~v~iwd 167 (357)
T 4g56_B 112 SDSGAVELWEILEKESLL-----------------------VNKFAKYEHDDIVKTLSVFSD-GTQAVSGGKDFSVKVWD 167 (357)
T ss_dssp ETTSCEEEC--------C-----------------------CCCEEECCCSSCEEEEEECSS-SSEEEEEETTSCEEEEE
T ss_pred ECCCEEEEeeccccceeE-----------------------EEeeccCCCCCCEEEEEECCC-CCEEEEEeCCCeEEEEE
Confidence 789999999997543322 112234479999999999999 56999999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE--eecCCeEEEEeCCCCCCEEEEEeC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~ 373 (502)
+.+++++..+.+|...|++++|++++..+|++++.||+|++||+++++...... .+...+.+++|+|++..+|++|+.
T Consensus 168 ~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~ 247 (357)
T 4g56_B 168 LSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDE 247 (357)
T ss_dssp TTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEES
T ss_pred CCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeec
Confidence 999999999999999999999999987789999999999999999877654332 356679999999998889999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEE
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
|+.|++||+++. .++..+.+|...|++++|+|++..+|++|+.|++|+|||+.+++ +....+|.+.|+
T Consensus 248 d~~i~~wd~~~~---------~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~---~~~~~~H~~~V~ 315 (357)
T 4g56_B 248 TGNVSLVNIKNP---------DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSE---VFRDLSHRDFVT 315 (357)
T ss_dssp SSCEEEEESSCG---------GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCE---EEEECCCSSCEE
T ss_pred ccceeEEECCCC---------cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCc---EeEECCCCCCEE
Confidence 999999999986 77888999999999999999987899999999999999999886 234457999999
Q ss_pred EEEEcC-CCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 454 SVAFSE-DSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 454 ~~~~sp-d~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+++|+| ++. +|++|+.||+|++|++.+........
T Consensus 316 ~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~~~~~~~i 351 (357)
T 4g56_B 316 GVAWSPLDHS-KFTTVGWDHKVLHHHLPSEGRTENLI 351 (357)
T ss_dssp EEEECSSSTT-EEEEEETTSCEEEEECC---------
T ss_pred EEEEeCCCCC-EEEEEcCCCeEEEEECCCCCcccccc
Confidence 999999 666 69999999999999997765544443
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.6e-42 Score=344.45 Aligned_cols=287 Identities=22% Similarity=0.379 Sum_probs=246.6
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.++.|+|++++|++|+.++ .++||.+..... ...+..|.. ...|+.| +|++++||+|
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg---~i~vwd~~~~~~-~~~l~~h~~-----~V~~v~~-------~~~~~~l~sg 168 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDA---TIKVWDYETGDF-ERTLKGHTD-----SVQDISF-------DHSGKLLASC 168 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSS---CEEEEETTTCCC-CEEECCCSS-----CEEEEEE-------CTTSSEEEEE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcE-EEEEeccCC-----cEEEEEE-------cCCCCEEEEE
Confidence 35889999999999999999999887 567776654432 112223332 2367777 7899999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|++|+|||+.... ....+.+|...|.+++|+|+ +.+|++|+.|++|++||
T Consensus 169 s~D~~i~iwd~~~~~---------------------------~~~~~~~h~~~V~~v~~~p~-~~~l~s~s~D~~i~~wd 220 (410)
T 1vyh_C 169 SADMTIKLWDFQGFE---------------------------CIRTMHGHDHNVSSVSIMPN-GDHIVSASRDKTIKMWE 220 (410)
T ss_dssp ETTSCCCEEETTSSC---------------------------EEECCCCCSSCEEEEEECSS-SSEEEEEETTSEEEEEE
T ss_pred eCCCeEEEEeCCCCc---------------------------eeEEEcCCCCCEEEEEEeCC-CCEEEEEeCCCeEEEEE
Confidence 999999999997532 22345689999999999999 56999999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCC-----------
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA----------- 364 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~----------- 364 (502)
+.+++++.++.+|...|.++.|+|++ .+|++|+.|++|++||+++.........|...|.+++|+|++
T Consensus 221 ~~~~~~~~~~~~h~~~v~~~~~~~~g-~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~ 299 (410)
T 1vyh_C 221 VQTGYCVKTFTGHREWVRMVRPNQDG-TLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGS 299 (410)
T ss_dssp TTTCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSC
T ss_pred CCCCcEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccc
Confidence 99999999999999999999999999 899999999999999999888776666888999999999963
Q ss_pred --------CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010769 365 --------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 365 --------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
..++++|+.||.|++||++++ .++..+.+|...|++++|+|++ .+|++|+.|++|++||+.+
T Consensus 300 ~~~~~~~~g~~l~sgs~D~~i~iwd~~~~---------~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~ 369 (410)
T 1vyh_C 300 ETKKSGKPGPFLLSGSRDKTIKMWDVSTG---------MCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKN 369 (410)
T ss_dssp C-------CCEEEEEETTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTT
T ss_pred cccccCCCCCEEEEEeCCCeEEEEECCCC---------ceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCC
Confidence 348999999999999999986 7788899999999999999998 8999999999999999988
Q ss_pred CCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
++ ++..+.+|...|++++|+|++++ |++|+.||+|+||+++
T Consensus 370 ~~--~~~~~~~h~~~v~~l~~~~~~~~-l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 370 KR--CMKTLNAHEHFVTSLDFHKTAPY-VVTGSVDQTVKVWECR 410 (410)
T ss_dssp SC--CCEEEECCSSCEEEEEECSSSSC-EEEEETTSEEEEEC--
T ss_pred Cc--eEEEEcCCCCcEEEEEEcCCCCE-EEEEeCCCcEEEEeCC
Confidence 77 56677889999999999999995 9999999999999864
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.4e-41 Score=324.94 Aligned_cols=286 Identities=20% Similarity=0.310 Sum_probs=243.0
Q ss_pred CCCccccccccccCC----CceEEEEEecCCcceeEEEEEecCCCCC-CceeeeeccccCCCcceeeeecCCCCCCCCCC
Q 010769 136 DEDSEDLEDMTINPN----DAVIVCARNEDDVSHLEVYILEESDGGD-PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~----~~~l~~~~~~~~~~~l~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~ 210 (502)
..|.+.|.+++|+|+ +.+|++|+.++ .++||.+....... ..+..|.. ...++.| ++++.
T Consensus 29 ~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~---~v~vW~~~~~~~~~~~~l~gh~~-----~v~~~~~-------~~~~~ 93 (321)
T 3ow8_A 29 QAHDDAIWSVAWGTNKKENSETVVTGSLDD---LVKVWKWRDERLDLQWSLEGHQL-----GVVSVDI-------SHTLP 93 (321)
T ss_dssp TSSSSCEEEEEEC-------CEEEEEETTS---CEEEEEEETTEEEEEEEECCCSS-----CEEEEEE-------CSSSS
T ss_pred ccCCCcEEEEEEecCCCCCCCEEEEEcCCC---CEEEEECCCCCeeeeeeeccCCC-----CEEEEEE-------CCCCC
Confidence 458999999999985 56899999887 67999887543200 01112222 2256666 78899
Q ss_pred EEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCc
Q 010769 211 FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ 290 (502)
Q Consensus 211 ~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~ 290 (502)
++++|+.|+.|+|||+..+.. ...+..|...+.+++|+|+ +.+|++|+.+|.
T Consensus 94 ~l~s~s~D~~i~lWd~~~~~~---------------------------~~~~~~~~~~~~~~~~spd-g~~l~~g~~dg~ 145 (321)
T 3ow8_A 94 IAASSSLDAHIRLWDLENGKQ---------------------------IKSIDAGPVDAWTLAFSPD-SQYLATGTHVGK 145 (321)
T ss_dssp EEEEEETTSEEEEEETTTTEE---------------------------EEEEECCTTCCCCEEECTT-SSEEEEECTTSE
T ss_pred EEEEEeCCCcEEEEECCCCCE---------------------------EEEEeCCCccEEEEEECCC-CCEEEEEcCCCc
Confidence 999999999999999975322 2233467788999999999 569999999999
Q ss_pred EEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEE
Q 010769 291 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 291 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 370 (502)
|++|++.+++....+..|...|.+++|+|++ ++|++|+.||.|++||+++++.......|...|.+++|+|++. +|++
T Consensus 146 v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~-~l~s 223 (321)
T 3ow8_A 146 VNIFGVESGKKEYSLDTRGKFILSIAYSPDG-KYLASGAIDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQ-LLVT 223 (321)
T ss_dssp EEEEETTTCSEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSC-EEEE
T ss_pred EEEEEcCCCceeEEecCCCceEEEEEECCCC-CEEEEEcCCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCC-EEEE
Confidence 9999999999999999999999999999999 8999999999999999998877665667888999999999876 8999
Q ss_pred EeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCC
Q 010769 371 SLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG 450 (502)
Q Consensus 371 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~ 450 (502)
++.||.|++||++.. .....+.+|...|.+++|+|++ .+|++++.|++|++||+.+++ ++..+..|.+
T Consensus 224 ~s~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~--~~~~~~~h~~ 291 (321)
T 3ow8_A 224 ASDDGYIKIYDVQHA---------NLAGTLSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT--CVHTFFDHQD 291 (321)
T ss_dssp ECTTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE--EEEEECCCSS
T ss_pred EcCCCeEEEEECCCc---------ceeEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE--EEEEEcCCCC
Confidence 999999999999976 6778889999999999999998 899999999999999999887 6778889999
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
.|.+++|+|++. .|++++.||.|+|||+
T Consensus 292 ~v~~v~~s~~g~-~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 292 QVWGVKYNGNGS-KIVSVGDDQEIHIYDC 319 (321)
T ss_dssp CEEEEEECTTSS-EEEEEETTCCEEEEEC
T ss_pred cEEEEEECCCCC-EEEEEeCCCeEEEEeC
Confidence 999999999999 5899999999999996
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.2e-40 Score=323.97 Aligned_cols=286 Identities=18% Similarity=0.315 Sum_probs=237.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .++||....... ......| .....++.| +|++++||+|+
T Consensus 53 gH~~~v~~~~~s~d~~~l~s~s~Dg---~v~iWd~~~~~~--~~~~~~~----~~~v~~~~~-------s~~~~~l~s~~ 116 (340)
T 1got_B 53 GHLAKIYAMHWGTDSRLLLSASQDG---KLIIWDSYTTNK--VHAIPLR----SSWVMTCAY-------APSGNYVACGG 116 (340)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTT---EEEEEETTTCCE--EEEEECS----SSCEEEEEE-------CTTSSEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEeCCC---cEEEEECCCCCc--ceEeecC----CccEEEEEE-------CCCCCEEEEEe
Confidence 4888999999999999999999887 455554432221 1111112 233456666 79999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.|+.|+||++...... ......+.+|...|.++.|+++ + .|++++.|++|++||+
T Consensus 117 ~d~~v~iw~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~-~-~l~s~s~d~~i~~wd~ 171 (340)
T 1got_B 117 LDNICSIYNLKTREGN-----------------------VRVSRELAGHTGYLSCCRFLDD-N-QIVTSSGDTTCALWDI 171 (340)
T ss_dssp TTCEEEEEETTTCSBS-----------------------CEEEEEEECCSSCEEEEEEEET-T-EEEEEETTSCEEEEET
T ss_pred CCCeEEEEECccCCCc-----------------------ceeEEEecCCCccEEEEEECCC-C-cEEEEECCCcEEEEEC
Confidence 9999999999753211 1222345589999999999987 3 5899999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
.+++++..+.+|...|.+++|+|++ .+|++|+.|+.|++||++++........|...|.+++|+|++. +|++|+.||.
T Consensus 172 ~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~d~~ 249 (340)
T 1got_B 172 ETGQQTTTFTGHTGDVMSLSLAPDT-RLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGN-AFATGSDDAT 249 (340)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCCcEEEEEcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCC-EEEEEcCCCc
Confidence 9999999999999999999999998 8999999999999999998887766667889999999999865 8999999999
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEe--cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEE
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLH--AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 454 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 454 (502)
|++||+++. ..+..+. .+...|++++|+|++ .+|++|+.|+.|++||+.+.+ .+..+.+|.+.|.+
T Consensus 250 v~iwd~~~~---------~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~~~~h~~~v~~ 317 (340)
T 1got_B 250 CRLFDLRAD---------QELMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKAD--RAGVLAGHDNRVSC 317 (340)
T ss_dssp EEEEETTTT---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC--EEEEEECCSSCEEE
T ss_pred EEEEECCCC---------cEEEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCc--EeeEeecCCCcEEE
Confidence 999999976 4444443 234579999999998 999999999999999999887 56677899999999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 455 VAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 455 ~~~spd~~~llasg~~dg~i~vwd 478 (502)
++|+|++.+ |++|+.||.|+|||
T Consensus 318 ~~~s~dg~~-l~s~s~D~~i~iWd 340 (340)
T 1got_B 318 LGVTDDGMA-VATGSWDSFLKIWN 340 (340)
T ss_dssp EEECTTSSC-EEEEETTSCEEEEC
T ss_pred EEEcCCCCE-EEEEcCCccEEecC
Confidence 999999995 99999999999996
No 6
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=9.5e-41 Score=329.77 Aligned_cols=299 Identities=21% Similarity=0.319 Sum_probs=240.0
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .++||....... ...+..|. ....+++| +|++++||+|
T Consensus 63 ~gH~~~V~~~~~sp~~~~l~s~s~D~---~v~iWd~~~~~~--~~~~~~h~----~~v~~~~~-------s~~g~~las~ 126 (380)
T 3iz6_a 63 QGHSGKVYSLDWTPEKNWIVSASQDG---RLIVWNALTSQK--THAIKLHC----PWVMECAF-------APNGQSVACG 126 (380)
T ss_dssp CCCSSCEEEEEECTTSSCEEEEETTS---EEEEEETTTTEE--EEEEECCC----TTCCCCEE-------CTTSSEEEEC
T ss_pred cccccEEEEEEEcCCCCEEEEEeCCC---eEEEEECCCCcc--ceEEecCC----CCEEEEEE-------CCCCCEEEEe
Confidence 45899999999999999999999887 556665433221 11111221 22355555 8999999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|+.|+||++....... ........+.+|...|.++.|+|++...|++|+.|++|++||
T Consensus 127 ~~d~~v~iw~~~~~~~~~--------------------~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd 186 (380)
T 3iz6_a 127 GLDSACSIFNLSSQADRD--------------------GNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWD 186 (380)
T ss_dssp CSSSCCEEEECCCCSSCC--------------------CSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEEC
T ss_pred eCCCcEEEEECCCCcccc--------------------CCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEE
Confidence 999999999997532111 112233456789999999999998777899999999999999
Q ss_pred CCCCeeeEEe-----ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC-CCccceEeecCCeEEEEeCCCCCCEEE
Q 010769 296 VAAGKCNLTL-----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 296 ~~~~~~~~~~-----~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~~~v~~v~~~p~~~~~l~ 369 (502)
+.+++++..+ .+|...|.+++|++.++.+|++|+.|++|++||++.. ........|...|.+++|+|++. +|+
T Consensus 187 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~ 265 (380)
T 3iz6_a 187 VTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQ-RFG 265 (380)
T ss_dssp TTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSS-EEE
T ss_pred cCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCC-eEE
Confidence 9999988877 6799999999999855589999999999999999854 44454567889999999999875 899
Q ss_pred EEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCC-------CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010769 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD-------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 370 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~-------~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
+|+.||.|++||++++ ..+..+..+. ..|++++|+|++ .+|++|+.||.|++||+..++. +
T Consensus 266 s~s~D~~i~lwd~~~~---------~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~~~--~ 333 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTG---------HQLQVYNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLAEM--V 333 (380)
T ss_dssp EECSSSCEEEEETTTT---------EEEEEECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTCCE--E
T ss_pred EEcCCCeEEEEECCCC---------cEEEEecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCCce--E
Confidence 9999999999999986 4444444332 358999999998 9999999999999999988873 3
Q ss_pred EEe----cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 443 ASR----NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 443 ~~~----~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
..+ .+|.+.|++++|+|++. +|++|+.||+|+||++...+.
T Consensus 334 ~~~~~~~~~h~~~v~~l~~s~dg~-~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 334 LNLGTLQNSHEGRISCLGLSSDGS-ALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp EEECCSCSSCCCCCCEEEECSSSS-EEEEECTTSCEEEEECCSSSS
T ss_pred EEEecccCCCCCceEEEEECCCCC-EEEEeeCCCCEEEEecCCCcc
Confidence 333 67999999999999999 599999999999999976543
No 7
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=1.1e-39 Score=318.96 Aligned_cols=290 Identities=17% Similarity=0.256 Sum_probs=237.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .++||...... . .+.-........+++| +|+|++||+|+
T Consensus 62 gH~~~V~~~~~s~d~~~l~s~s~Dg---~v~vWd~~~~~-----~-~~~~~~~~~~v~~~~~-------sp~g~~lasg~ 125 (354)
T 2pbi_B 62 GHGNKVLCMDWCKDKRRIVSSSQDG---KVIVWDSFTTN-----K-EHAVTMPCTWVMACAY-------APSGCAIACGG 125 (354)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTS---EEEEEETTTCC-----E-EEEEECSSSCCCEEEE-------CTTSSEEEEES
T ss_pred CCCCeEEEEEECCCCCEEEEEeCCC---eEEEEECCCCC-----c-ceEEecCCCCEEEEEE-------CCCCCEEEEee
Confidence 4889999999999999999999887 45555433221 1 1111111233456666 89999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.|+.|++|++....... .......+.+|...|.+++|+|+ +..|++|+.|++|++||+
T Consensus 126 ~d~~i~v~~~~~~~~~~---------------------~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~s~D~~v~lwd~ 183 (354)
T 2pbi_B 126 LDNKCSVYPLTFDKNEN---------------------MAAKKKSVAMHTNYLSACSFTNS-DMQILTASGDGTCALWDV 183 (354)
T ss_dssp TTSEEEEEECCCCTTCC---------------------SGGGCEEEEECSSCEEEEEECSS-SSEEEEEETTSEEEEEET
T ss_pred CCCCEEEEEEecccccc---------------------ccccceeeeccCCcEEEEEEeCC-CCEEEEEeCCCcEEEEeC
Confidence 99999999986432111 01222344579999999999999 568999999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCC-CcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
.+++++..+.+|...|.+++|+|.. +.+|++|+.||+|++||+++++.......|...|.+++|+|++. +|++++.|+
T Consensus 184 ~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~ 262 (354)
T 2pbi_B 184 ESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGD-AFASGSDDA 262 (354)
T ss_dssp TTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCC-EEEEEeCCC
Confidence 9999999999999999999998853 27999999999999999999887766667889999999999865 899999999
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEec--CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEE
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
.|++||++.. ..+..+.. +...+++++|+|++ .+|++|+.|+.|++||+.+++ .+..+.+|.+.|+
T Consensus 263 ~v~lwd~~~~---------~~~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~--~~~~l~~h~~~v~ 330 (354)
T 2pbi_B 263 TCRLYDLRAD---------REVAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGS--RVSILFGHENRVS 330 (354)
T ss_dssp CEEEEETTTT---------EEEEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS--EEEEECCCSSCEE
T ss_pred eEEEEECCCC---------cEEEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCc--eEEEEECCCCcEE
Confidence 9999999976 33444433 34578999999998 999999999999999998887 5667789999999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 454 SVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 454 ~~~~spd~~~llasg~~dg~i~vwd 478 (502)
+++|+|++.+ |++|+.||+|+||+
T Consensus 331 ~l~~spdg~~-l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGTA-FCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSSC-EEEEETTSEEEEEC
T ss_pred EEEECCCCCE-EEEEcCCCCEEecC
Confidence 9999999995 99999999999996
No 8
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.1e-40 Score=314.99 Aligned_cols=289 Identities=20% Similarity=0.259 Sum_probs=234.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|.+.|.+++|+|++++|++|+.++ .++||.+..... ...+..|. ....++.| +|++++|++|+
T Consensus 11 ~h~~~V~~~~fsp~~~~l~s~~~dg---~v~lWd~~~~~~--~~~~~~~~----~~v~~~~~-------~~~~~~l~s~s 74 (304)
T 2ynn_A 11 NRSDRVKGIDFHPTEPWVLTTLYSG---RVELWNYETQVE--VRSIQVTE----TPVRAGKF-------IARKNWIIVGS 74 (304)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTS---EEEEEETTTTEE--EEEEECCS----SCEEEEEE-------EGGGTEEEEEE
T ss_pred CCCCceEEEEECCCCCEEEEEcCCC---cEEEEECCCCce--eEEeeccC----CcEEEEEE-------eCCCCEEEEEC
Confidence 4778999999999999999999887 556666543321 11112222 22356666 68899999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.|+.|+|||+.++. ....+.+|...|++++|+|+ +.+|++|+.|++|++||+
T Consensus 75 ~d~~i~vwd~~~~~---------------------------~~~~~~~h~~~v~~~~~~~~-~~~l~sgs~D~~v~lWd~ 126 (304)
T 2ynn_A 75 DDFRIRVFNYNTGE---------------------------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNW 126 (304)
T ss_dssp TTSEEEEEETTTCC---------------------------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEEG
T ss_pred CCCEEEEEECCCCc---------------------------EEEEEeCCCCcEEEEEEcCC-CCEEEEECCCCeEEEEEC
Confidence 99999999997533 22345589999999999999 569999999999999999
Q ss_pred CCC-eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCC-CCCEEEEEeC
Q 010769 297 AAG-KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH-AEHSFVVSLE 373 (502)
Q Consensus 297 ~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~-~~~~l~~~~~ 373 (502)
.++ .+...+.+|...|.+++|+|.++.+|++|+.|++|++||++......... .+...+..+.|+|. ...++++|+.
T Consensus 127 ~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~ 206 (304)
T 2ynn_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASD 206 (304)
T ss_dssp GGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEET
T ss_pred CCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcC
Confidence 887 56677899999999999999655899999999999999998776554333 34577999999874 2348999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEE
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
||.|++||+++. .++..+.+|...|.+++|+|++ .+|++|+.||+|++||+.+.+ ++..+..|...++
T Consensus 207 D~~i~iWd~~~~---------~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~--~~~~~~~~~~~~~ 274 (304)
T 2ynn_A 207 DLTIKIWDYQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSW 274 (304)
T ss_dssp TSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC--EEEEECCSSSSEE
T ss_pred CCeEEEEeCCCC---------ccceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc--eeeeccCCCccEE
Confidence 999999999986 7888999999999999999998 899999999999999999987 5677888889999
Q ss_pred EEEEcCCCCcE-EEEEeCCCcEEEEECCCC
Q 010769 454 SVAFSEDSPFV-LAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 454 ~~~~spd~~~l-lasg~~dg~i~vwd~~~~ 482 (502)
+++|+|++... +++|+.+ .+.+|++...
T Consensus 275 ~~~~~~~~~~~~~asg~~~-g~~~~~~~~~ 303 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGFDN-GFTVLSLGND 303 (304)
T ss_dssp EEEECTTCGGGCEEEEETT-EEEEEECC--
T ss_pred EEEECCCCCceEEEEecCC-ceEEEEeccC
Confidence 99999988643 6666554 5888888653
No 9
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.1e-39 Score=317.73 Aligned_cols=306 Identities=22% Similarity=0.360 Sum_probs=235.2
Q ss_pred Ccc-ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCC-CceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 138 DSE-DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGD-PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 138 ~~~-~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
|.+ .|.+++|+|++++||+|+.++ .++||......... ..+...|. ....+++| +|++++||+|
T Consensus 14 h~~~~v~~l~~sp~g~~las~~~D~---~i~iw~~~~~~~~~~~~~~~~h~----~~v~~~~~-------sp~g~~l~s~ 79 (345)
T 3fm0_A 14 HPDSRCWFLAWNPAGTLLASCGGDR---RIRIWGTEGDSWICKSVLSEGHQ----RTVRKVAW-------SPCGNYLASA 79 (345)
T ss_dssp STTSCEEEEEECTTSSCEEEEETTS---CEEEEEEETTEEEEEEEECSSCS----SCEEEEEE-------CTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCEEEEEcCCC---eEEEEEcCCCcceeeeeeccccC----CcEEEEEE-------CCCCCEEEEE
Confidence 555 899999999999999999887 67888776542100 01111122 23367777 7999999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|+.|+||++.... ......+.+|...|.+++|+|+ +++|++|+.|++|++||
T Consensus 80 s~D~~v~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~v~~sp~-~~~l~s~s~D~~v~iwd 133 (345)
T 3fm0_A 80 SFDATTCIWKKNQDD-------------------------FECVTTLEGHENEVKSVAWAPS-GNLLATCSRDKSVWVWE 133 (345)
T ss_dssp ETTSCEEEEEECCC--------------------------EEEEEEECCCSSCEEEEEECTT-SSEEEEEETTSCEEEEE
T ss_pred ECCCcEEEEEccCCC-------------------------eEEEEEccCCCCCceEEEEeCC-CCEEEEEECCCeEEEEE
Confidence 999999999986421 1223345689999999999999 67999999999999999
Q ss_pred CCCC---eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc--cceEeecCCeEEEEeCCCCCCEEEE
Q 010769 296 VAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS--GFKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 296 ~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~--~~~~~~~~~v~~v~~~p~~~~~l~~ 370 (502)
+.++ .++..+.+|...|.+++|+|++ .+|++|+.|++|++|+++..... .....|...|.+++|+|++. +|++
T Consensus 134 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~-~l~s 211 (345)
T 3fm0_A 134 VDEEDEYECVSVLNSHTQDVKHVVWHPSQ-ELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQ-RLAS 211 (345)
T ss_dssp ECTTSCEEEEEEECCCCSCEEEEEECSSS-SCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSS-EEEE
T ss_pred CCCCCCeEEEEEecCcCCCeEEEEECCCC-CEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCC-EEEE
Confidence 9876 4567788999999999999999 89999999999999999876432 33456788999999999875 8999
Q ss_pred EeCCCeEEEEECCCCCCCCCC------CCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC----e
Q 010769 371 SLEDGTIKGFDIRTAKSDPDS------TSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ----P 439 (502)
Q Consensus 371 ~~~dg~i~i~d~~~~~~~~~~------~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~----~ 439 (502)
++.||.|++|+.......... ....++..+.+ |...|.+++|+|++ .+|++++.|+.|++|+..... +
T Consensus 212 ~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~~~~ 290 (345)
T 3fm0_A 212 CSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDPQQP 290 (345)
T ss_dssp EETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCTTSC
T ss_pred EeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCccee
Confidence 999999999997543211100 00122334444 88999999999998 889999999999999987542 1
Q ss_pred e---EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 440 S---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 440 ~---~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
. ......+|...|++++|+|+++.+||+|+.||+|++|++.+++.+.
T Consensus 291 ~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~~~~ 340 (345)
T 3fm0_A 291 TFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPEGLH 340 (345)
T ss_dssp CEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC-----
T ss_pred eEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCCCcc
Confidence 1 1223468999999999999986679999999999999998877654
No 10
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.7e-38 Score=303.76 Aligned_cols=250 Identities=19% Similarity=0.297 Sum_probs=216.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|++++||+|+.||.|+|||+.+.. ....+..|..+|.+++
T Consensus 17 ~~~~f-------sp~~~~l~s~~~dg~v~lWd~~~~~---------------------------~~~~~~~~~~~v~~~~ 62 (304)
T 2ynn_A 17 KGIDF-------HPTEPWVLTTLYSGRVELWNYETQV---------------------------EVRSIQVTETPVRAGK 62 (304)
T ss_dssp EEEEE-------CSSSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEcCCCcEEEEECCCCc---------------------------eeEEeeccCCcEEEEE
Confidence 67776 8999999999999999999997532 2223457889999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc-cceEeec
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~ 352 (502)
|+|+ +++|++|+.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||+++.... .....|.
T Consensus 63 ~~~~-~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~ 140 (304)
T 2ynn_A 63 FIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (304)
T ss_dssp EEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTEEEEEECCCC
T ss_pred EeCC-CCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcchhhhhcccC
Confidence 9999 6699999999999999999999999999999999999999999 89999999999999999876443 3345688
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCC-CCCEEEEEeCCCcEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPL-VPNLLATGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~-~~~~l~t~s~dg~i~ 430 (502)
..|.+++|+|.+..+|++|+.||.|++||++.. .+...+ ..|...+..+.|+|. ...+|++|+.|++|+
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~ 211 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIK 211 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCC---------CccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEE
Confidence 899999999976679999999999999999876 334444 456788999999873 227999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+||+++++ ++..+.+|...|.+++|+|+++ +|++|+.||+|+|||+.+++.+..+..+
T Consensus 212 iWd~~~~~--~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~Dg~i~iWd~~~~~~~~~~~~~ 269 (304)
T 2ynn_A 212 IWDYQTKS--CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (304)
T ss_dssp EEETTTTE--EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCCEEEEECCS
T ss_pred EEeCCCCc--cceeeCCCCCCEEEEEECCCCC-EEEEEcCCCeEEEEECCCCceeeeccCC
Confidence 99999887 6778889999999999999999 5999999999999999998887665443
No 11
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=5.1e-38 Score=311.66 Aligned_cols=299 Identities=22% Similarity=0.334 Sum_probs=231.7
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccc--------------cCCCcceeeeecCC
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHII--------------IPAFPLCMAWLDCP 202 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~--------------~~~~~~~~~w~~~~ 202 (502)
.|...|.+++|+|+|++||+|+. + .++||.+..... ......|... ...+..+++|
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~-~---~v~i~~~~~g~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~---- 131 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCN-K---TTQVYRVSDGSL--VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCF---- 131 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECB-S---CEEEEETTTCCE--EEEECC-----------------CCCCBEEEEEE----
T ss_pred CCCCEEEEEEECCCCCEEEEEcC-C---cEEEEEecCCCE--EEEecCccccccccccccccccCCCceeEEEEEE----
Confidence 48889999999999999999863 3 456666543321 0001111100 0011345555
Q ss_pred CCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 203 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+|+|++||+|+.|+.|+|||+... .....+.+|...|.+++|+|+ +.+|
T Consensus 132 ---s~dg~~l~s~~~d~~i~iwd~~~~---------------------------~~~~~~~~h~~~v~~~~~~p~-~~~l 180 (393)
T 1erj_A 132 ---SPDGKFLATGAEDRLIRIWDIENR---------------------------KIVMILQGHEQDIYSLDYFPS-GDKL 180 (393)
T ss_dssp ---CTTSSEEEEEETTSCEEEEETTTT---------------------------EEEEEECCCSSCEEEEEECTT-SSEE
T ss_pred ---CCCCCEEEEEcCCCeEEEEECCCC---------------------------cEEEEEccCCCCEEEEEEcCC-CCEE
Confidence 899999999999999999999742 223345689999999999999 5699
Q ss_pred EEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce-------EeecCCe
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-------WAVAADV 355 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-------~~~~~~v 355 (502)
++|+.|++|++||+.++++...+. +...+.+++|+|..+.+|++|+.||.|++||++++...... ..|...|
T Consensus 181 ~s~s~d~~v~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 181 VSGSGDRTVRIWDLRTGQCSLTLS-IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCE
T ss_pred EEecCCCcEEEEECCCCeeEEEEE-cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCE
Confidence 999999999999999999888876 56789999999944489999999999999999987654322 3567889
Q ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC---CCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD---STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 356 ~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~---~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.+++|+|++. ++++|+.||.|++||+++...... .....+...+.+|...|.+++|+|++ .+|++|+.|+.|++|
T Consensus 260 ~~v~~~~~g~-~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~iw 337 (393)
T 1erj_A 260 YSVVFTRDGQ-SVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND-EYILSGSKDRGVLFW 337 (393)
T ss_dssp EEEEECTTSS-EEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG-CEEEEEETTSEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC-CEEEEEeCCCeEEEE
Confidence 9999999875 899999999999999986532110 00123456778999999999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcC------CCCcEEEEEeCCCcEEEEECCCC
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSE------DSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~sp------d~~~llasg~~dg~i~vwd~~~~ 482 (502)
|+.+++ .+..+.+|.+.|.+++|++ ++. +|++|+.||+|+||++...
T Consensus 338 d~~~~~--~~~~l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 338 DKKSGN--PLLMLQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp ETTTCC--EEEEEECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC
T ss_pred ECCCCe--EEEEECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccccc
Confidence 999987 4667788999999999986 566 6999999999999998653
No 12
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=8.7e-38 Score=299.81 Aligned_cols=287 Identities=20% Similarity=0.344 Sum_probs=234.1
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .++||....... ...+..|. ....++.| +|++++|++|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg---~i~iw~~~~~~~--~~~~~~h~----~~v~~~~~-------~~~~~~l~s~ 83 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADK---LIKIWGAYDGKF--EKTISGHK----LGISDVAW-------SSDSNLLVSA 83 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCE--EEEECCCS----SCEEEEEE-------CTTSSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCC---eEEEEeCCCccc--chhhccCC----CceEEEEE-------cCCCCEEEEE
Confidence 45888999999999999999999887 456665433221 11122222 22367777 7899999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|+.|+|||+..... ...+.+|...|.+++|+|+ +++|++|+.|++|++||
T Consensus 84 ~~d~~i~vwd~~~~~~---------------------------~~~~~~~~~~v~~~~~~~~-~~~l~s~~~d~~i~iwd 135 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKC---------------------------LKTLKGHSNYVFCCNFNPQ-SNLIVSGSFDESVRIWD 135 (312)
T ss_dssp ETTSEEEEEETTTCCE---------------------------EEEEECCSSCEEEEEECSS-SSEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEECCCCcE---------------------------EEEEcCCCCCEEEEEEcCC-CCEEEEEeCCCcEEEEE
Confidence 9999999999975322 2234579999999999999 66999999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCCCCCEEEEEeCC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~d 374 (502)
+.+++++..+..|...|.+++|+|++ .+|++++.||.|++||+++.+...... .+...+.+++|+|++. ++++++.+
T Consensus 136 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~d 213 (312)
T 4ery_A 136 VKTGKCLKTLPAHSDPVSAVHFNRDG-SLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGK-YILAATLD 213 (312)
T ss_dssp TTTCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSS-EEEEEETT
T ss_pred CCCCEEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCC-EEEEEcCC
Confidence 99999999999999999999999998 899999999999999999876544332 3456799999999876 89999999
Q ss_pred CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE--EEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCE
Q 010769 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT--ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 375 g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~--l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
|.|++||+++. ..+..+.+|...+.+ ..+++.+..+|++|+.||.|++||+.+++ .+..+.+|...|
T Consensus 214 ~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~h~~~v 282 (312)
T 4ery_A 214 NTLKLWDYSKG---------KCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE--IVQKLQGHTDVV 282 (312)
T ss_dssp TEEEEEETTTT---------EEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC--EEEEECCCSSCE
T ss_pred CeEEEEECCCC---------cEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch--hhhhhhccCCcE
Confidence 99999999986 667778778765433 34554444899999999999999999887 577888999999
Q ss_pred EEEEEcCCCCcEEEEEe--CCCcEEEEECC
Q 010769 453 FSVAFSEDSPFVLAIGG--SKGKLEIWDTL 480 (502)
Q Consensus 453 ~~~~~spd~~~llasg~--~dg~i~vwd~~ 480 (502)
.+++|+|+++ +|++++ .|+.|++|+..
T Consensus 283 ~~~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 283 ISTACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEEEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred EEEeecCcCC-ceEEEEccCCccEEEecCC
Confidence 9999999999 577776 69999999863
No 13
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.1e-37 Score=300.31 Aligned_cols=288 Identities=17% Similarity=0.295 Sum_probs=231.5
Q ss_pred CCCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCC---CceeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010769 136 DEDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGD---PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~---~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~ 211 (502)
..|...|.+++|+|++ ++|++|+.++ .+++|.+....... ...+..|. ....++.| +|++++
T Consensus 14 ~gH~~~V~~l~~~~~~~~~l~s~s~D~---~v~~W~~~~~~~~~~~~~~~~~~h~----~~v~~~~~-------s~dg~~ 79 (319)
T 3frx_A 14 EGHNGWVTSLATSAGQPNLLLSASRDK---TLISWKLTGDDQKFGVPVRSFKGHS----HIVQDCTL-------TADGAY 79 (319)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTS---EEEEEEEEEETTEEEEEEEEEECCS----SCEEEEEE-------CTTSSE
T ss_pred ccccceEEEEEccCCCccEEEEecCCc---cEEEecCCCCCccccccceEEeCCc----ccEEEEEE-------CCCCCE
Confidence 4589999999999975 8999999887 67888776433200 01112222 22256666 789999
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
|++|+.|++|+|||+.++. ....+.+|...|.+++|+|+ +.+|++|+.|++|
T Consensus 80 l~s~s~D~~v~~wd~~~~~---------------------------~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~D~~i 131 (319)
T 3frx_A 80 ALSASWDKTLRLWDVATGE---------------------------TYQRFVGHKSDVMSVDIDKK-ASMIISGSRDKTI 131 (319)
T ss_dssp EEEEETTSEEEEEETTTTE---------------------------EEEEEECCSSCEEEEEECTT-SCEEEEEETTSCE
T ss_pred EEEEeCCCEEEEEECCCCC---------------------------eeEEEccCCCcEEEEEEcCC-CCEEEEEeCCCeE
Confidence 9999999999999997532 22345589999999999999 5699999999999
Q ss_pred EEEECCCCeeeEEeccCCCCeEEEEEcCCC-----CcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCC
Q 010769 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHS-----PQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~-----~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 366 (502)
++||+. ++++..+.+|...|.++.|+|.. ..+|++++.|+.|++||+++.........|...|.+++|+|++.
T Consensus 132 ~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~- 209 (319)
T 3frx_A 132 KVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGT- 209 (319)
T ss_dssp EEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSS-
T ss_pred EEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCC-
Confidence 999986 56778888999999999999864 24899999999999999998776666667899999999999876
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec
Q 010769 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN 446 (502)
Q Consensus 367 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~ 446 (502)
+|++++.||.|++||+++. ..+..+.. ...|.+++|+|++ .+|++++.+ .+++|++..... +..+.
T Consensus 210 ~l~s~~~dg~i~iwd~~~~---------~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~~~~--~~~~~ 275 (319)
T 3frx_A 210 LIASAGKDGEIMLWNLAAK---------KAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDPQYL--VDDLR 275 (319)
T ss_dssp EEEEEETTCEEEEEETTTT---------EEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETTEEE--EEEEC
T ss_pred EEEEEeCCCeEEEEECCCC---------cEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCcCee--eeccC
Confidence 8999999999999999986 56666664 5689999999998 888887755 599999987652 32222
Q ss_pred --------CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 447 --------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 447 --------~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.|...+.+++|+|+|++ |++|+.||.|+|||+.++
T Consensus 276 ~~~~~~~~~~~~~v~~~~~spdg~~-l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 276 PEFAGYSKAAEPHAVSLAWSADGQT-LFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CCCTTCCGGGCCCEEEEEECTTSSE-EEEEETTSCEEEEEEEEC
T ss_pred ccccccccCcCcceeEEEECCCCCE-EEEeecCceEEEEEEeec
Confidence 24567999999999995 899999999999999764
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=6.1e-38 Score=312.81 Aligned_cols=250 Identities=22% Similarity=0.331 Sum_probs=223.9
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|+.| +|++++||+|+.||.|+|||+.++.. ...+.+|...|++++
T Consensus 112 ~~~~~-------~p~~~~l~s~s~Dg~i~vwd~~~~~~---------------------------~~~l~~h~~~V~~v~ 157 (410)
T 1vyh_C 112 TRVIF-------HPVFSVMVSASEDATIKVWDYETGDF---------------------------ERTLKGHTDSVQDIS 157 (410)
T ss_dssp EEEEE-------CSSSSEEEEEESSSCEEEEETTTCCC---------------------------CEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEeCCCeEEEEECCCCcE---------------------------EEEEeccCCcEEEEE
Confidence 67777 78999999999999999999975332 234568999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecC
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA 353 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 353 (502)
|+|+ +.+|++|+.|++|+|||+.+++++.++.+|...|.+++|+|++ .+|++|+.|++|++||++++........|..
T Consensus 158 ~~~~-~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~ 235 (410)
T 1vyh_C 158 FDHS-GKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGYCVKTFTGHRE 235 (410)
T ss_dssp ECTT-SSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred EcCC-CCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcEEEEEeCCCc
Confidence 9999 5699999999999999999999999999999999999999998 8999999999999999999887776778889
Q ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC-----------------
Q 010769 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV----------------- 416 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~----------------- 416 (502)
.|.++.|+|++. ++++|+.||.|++||+++. .....+..|...|.+++|+|++
T Consensus 236 ~v~~~~~~~~g~-~l~s~s~D~~v~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 236 WVRMVRPNQDGT-LIASCSNDQTVRVWVVATK---------ECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred cEEEEEECCCCC-EEEEEcCCCeEEEEECCCC---------ceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 999999999865 8999999999999999886 6778889999999999999962
Q ss_pred --CCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 417 --PNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 417 --~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+.+|++|+.|++|++||++++. ++..+.+|.+.|++++|+|++.+ |++|+.||.|++||+.+++++..+.+|.
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~--~~~~~~~h~~~v~~v~~~~~g~~-l~s~s~D~~i~vwd~~~~~~~~~~~~h~ 380 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGM--CLMTLVGHDNWVRGVLFHSGGKF-ILSCADDKTLRVWDYKNKRCMKTLNAHE 380 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTE--EEEEEECCSSCEEEEEECSSSSC-EEEEETTTEEEEECCTTSCCCEEEECCS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCc--eEEEEECCCCcEEEEEEcCCCCE-EEEEeCCCeEEEEECCCCceEEEEcCCC
Confidence 2689999999999999999887 56777889999999999999995 8899999999999999988877665543
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-38 Score=303.09 Aligned_cols=304 Identities=19% Similarity=0.308 Sum_probs=220.9
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCcee-eeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLY-VHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
.|...|.++.|+|+ +|++|+.++ .+++|.+..... .+. ............+++| +|++++||+|
T Consensus 12 ~h~~~v~~~~~s~~--~las~~~D~---~i~lw~~~~~~~---~~~~~~~~~~h~~~v~~v~~-------sp~~~~las~ 76 (330)
T 2hes_X 12 LYKEKIWSFDFSQG--ILATGSTDR---KIKLVSVKYDDF---TLIDVLDETAHKKAIRSVAW-------RPHTSLLAAG 76 (330)
T ss_dssp CCSSCEEEEEEETT--EEEEEESSS---CEEEEECSSSCC---EEEEEECTTCCCSCEEEEEE-------CTTSSEEEEE
T ss_pred cCCCceeeeccCCC--EEEEEcCCC---EEEEEEecCCCe---EEEEEEecCCccCCEEEEEE-------CCCCCEEEEE
Confidence 47889999999998 899998887 567777654321 111 1100001223367777 7899999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|+.|+||++...... .........+.+|...|++++|+|+ +.+|++|+.|++|++||
T Consensus 77 s~D~~v~iw~~~~~~~~--------------------~~~~~~~~~~~~h~~~V~~v~~sp~-g~~las~s~D~~v~iwd 135 (330)
T 2hes_X 77 SFDSTVSIWAKEESADR--------------------TFEMDLLAIIEGHENEVKGVAWSND-GYYLATCSRDKSVWIWE 135 (330)
T ss_dssp ETTSCEEEEEC---------------------------CCCEEEEEEC----CEEEEEECTT-SCEEEEEETTSCEEEEE
T ss_pred eCCCcEEEEEcccCcCc--------------------cccceeEEEEcCCCCcEEEEEECCC-CCEEEEEeCCCEEEEEe
Confidence 99999999998531100 0012233456689999999999999 56999999999999999
Q ss_pred CCC----CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC--CCccceEeecCCeEEEEeCCCC-CCEE
Q 010769 296 VAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS--THSGFKWAVAADVESLAWDPHA-EHSF 368 (502)
Q Consensus 296 ~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~~~~~~v~~v~~~p~~-~~~l 368 (502)
+.. .+++..+.+|...|.+++|+|++ .+|++|+.|++|++||++.. ........|...|.+++|+|++ ...+
T Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l 214 (330)
T 2hes_X 136 TDESGEEYECISVLQEHSQDVKHVIWHPSE-ALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRL 214 (330)
T ss_dssp CCTTCCCCEEEEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEE
T ss_pred ccCCCCCeEEEEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEE
Confidence 943 25678889999999999999998 89999999999999998765 3344445788899999999973 3478
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-ec
Q 010769 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-RN 446 (502)
Q Consensus 369 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-~~ 446 (502)
++|+.|++|++|+++........ .......+.. |...|.+++|++. .+|++++.||.|++|++.++....... ..
T Consensus 215 ~s~s~D~~v~iw~~~~~~~~~~~-~~~~~~~~~~~h~~~v~~v~~s~~--~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 291 (330)
T 2hes_X 215 CSGSDDSTVRVWKYMGDDEDDQQ-EWVCEAILPDVHKRQVYNVAWGFN--GLIASVGADGVLAVYEEVDGEWKVFAKRAL 291 (330)
T ss_dssp EEEETTSCEEEEEEEEECTTSCE-EEEEEEECCSCCSSCEEEEEECTT--SCEEEEETTSCEEEEEEETTEEEEEEEESC
T ss_pred EEEeCCCeEEEEEecCCCccccc-eeEEeeecccccccceEEEEEcCC--CEEEEEeCCCEEEEEEcCCCceEEEecccc
Confidence 99999999999999764210000 0012333443 8999999999974 589999999999999998775333333 35
Q ss_pred CCCC-CEEEEEEcC--CCCcEEEEEeCCCcEEEEECCC
Q 010769 447 PKAG-AVFSVAFSE--DSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 447 ~~~~-~v~~~~~sp--d~~~llasg~~dg~i~vwd~~~ 481 (502)
.|.. .|.+++|+| ++. +|++|+.||+|+||++.+
T Consensus 292 ~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 292 CHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred ccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 6776 899999999 577 599999999999999865
No 16
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-37 Score=298.47 Aligned_cols=256 Identities=21% Similarity=0.343 Sum_probs=222.0
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++|.+. ..+++.+||+|+.|++|+||++.... ......+.+|...|.++
T Consensus 35 V~~v~~~~~---~~~~~~~l~tgs~D~~v~vW~~~~~~-------------------------~~~~~~l~gh~~~v~~~ 86 (321)
T 3ow8_A 35 IWSVAWGTN---KKENSETVVTGSLDDLVKVWKWRDER-------------------------LDLQWSLEGHQLGVVSV 86 (321)
T ss_dssp EEEEEEC----------CEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEE
T ss_pred EEEEEEecC---CCCCCCEEEEEcCCCCEEEEECCCCC-------------------------eeeeeeeccCCCCEEEE
Confidence 378888421 11357899999999999999986321 11223456899999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 352 (502)
+|+++ ..++++|+.|++|++||+.+++++..+..|...+.+++|+|++ .+|++|+.+|.|++|++++.........+.
T Consensus 87 ~~~~~-~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~ 164 (321)
T 3ow8_A 87 DISHT-LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGKKEYSLDTRG 164 (321)
T ss_dssp EECSS-SSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCSEEEEEECSS
T ss_pred EECCC-CCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCceeEEecCCC
Confidence 99999 5699999999999999999999999999999999999999999 899999999999999999887766566677
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
..+.+++|+|++. ++++|+.||.|++||++++ +.+..+.+|..+|.+++|+|++ .+|++|+.|+.|++|
T Consensus 165 ~~v~~~~~spdg~-~lasg~~dg~i~iwd~~~~---------~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iw 233 (321)
T 3ow8_A 165 KFILSIAYSPDGK-YLASGAIDGIINIFDIATG---------KLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIY 233 (321)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEETTTT---------EEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEE
T ss_pred ceEEEEEECCCCC-EEEEEcCCCeEEEEECCCC---------cEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEE
Confidence 8899999999876 8999999999999999986 7788899999999999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
|++... ....+.+|...|.+++|+|++. +|++|+.|++|+|||+.+++++....++.
T Consensus 234 d~~~~~--~~~~~~~h~~~v~~~~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~h~ 290 (321)
T 3ow8_A 234 DVQHAN--LAGTLSGHASWVLNVAFCPDDT-HFVSSSSDKSVKVWDVGTRTCVHTFFDHQ 290 (321)
T ss_dssp ETTTCC--EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred ECCCcc--eeEEEcCCCCceEEEEECCCCC-EEEEEeCCCcEEEEeCCCCEEEEEEcCCC
Confidence 999887 5677889999999999999999 59999999999999999999888776654
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.5e-37 Score=297.95 Aligned_cols=289 Identities=18% Similarity=0.292 Sum_probs=224.6
Q ss_pred CCccccccccc-----cC-CCceEEEEEecCCcceeEEEEEecCCCCC------CceeeeeccccCCCcceeeeecCCCC
Q 010769 137 EDSEDLEDMTI-----NP-NDAVIVCARNEDDVSHLEVYILEESDGGD------PNLYVHHHIIIPAFPLCMAWLDCPLK 204 (502)
Q Consensus 137 ~~~~~v~~~~~-----~p-~~~~l~~~~~~~~~~~l~v~~~~~~~~~~------~~l~~~~~~~~~~~~~~~~w~~~~~~ 204 (502)
.|.+.|.++.| +| ++++|++|+.++ +++||.+....... ..+..|. ....++.|
T Consensus 19 gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~---~v~iWd~~~~~~~~~~~~~~~~l~~h~-----~~V~~~~~------ 84 (343)
T 2xzm_R 19 GHSDWVTSIVAGFSQKENEDSPVLISGSRDK---TVMIWKLYEEEQNGYFGIPHKALTGHN-----HFVSDLAL------ 84 (343)
T ss_dssp CCSSCEEEEEECCCSSTTCCCCEEEEEETTS---CEEEEEECSSCCSSBSEEEEEEECCCS-----SCEEEEEE------
T ss_pred cchhhhhheeeEEEeecCCCCCEEEEEcCCC---EEEEEECCcCCcccccccccchhccCC-----CceEEEEE------
Confidence 48889999999 76 899999999887 67888876543210 0111222 22356766
Q ss_pred CCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 205 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 205 ~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|++.+|++|+.|++|+|||+.+.. ....+.+|...|.+++|+|+ +.+|++
T Consensus 85 -~~~~~~l~s~s~D~~v~lwd~~~~~---------------------------~~~~~~~h~~~v~~v~~sp~-~~~l~s 135 (343)
T 2xzm_R 85 -SQENCFAISSSWDKTLRLWDLRTGT---------------------------TYKRFVGHQSEVYSVAFSPD-NRQILS 135 (343)
T ss_dssp -CSSTTEEEEEETTSEEEEEETTSSC---------------------------EEEEEECCCSCEEEEEECSS-TTEEEE
T ss_pred -CCCCCEEEEEcCCCcEEEEECCCCc---------------------------EEEEEcCCCCcEEEEEECCC-CCEEEE
Confidence 7899999999999999999997532 22244589999999999999 569999
Q ss_pred EecCCcEEEEECCCCeeeEEe---ccCCCCeEEEEEcCCCC---------cEEEEEECCCcEEEEeCCCCCCccceEeec
Q 010769 285 ASADKQVKIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSP---------QILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~---------~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 352 (502)
|+.|++|++||+... ....+ ..|...|.+++|+|.+. .+|++++.||.|++||.+ .........|.
T Consensus 136 ~~~d~~i~~wd~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~~~~~h~ 213 (343)
T 2xzm_R 136 AGAEREIKLWNILGE-CKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRYTFKAHE 213 (343)
T ss_dssp EETTSCEEEEESSSC-EEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEEEEECCS
T ss_pred EcCCCEEEEEeccCC-ceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeEEEcCcc
Confidence 999999999999843 33333 37889999999999862 589999999999999954 33333455788
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
..|.+++|+|++. +|++|+.||.|++||++.. ..+...+ .+...|.+++|+|++ .+|+++ .|+.|++|
T Consensus 214 ~~v~~~~~s~~g~-~l~sgs~dg~v~iwd~~~~--------~~~~~~~-~~~~~v~~v~~sp~~-~~la~~-~d~~v~iw 281 (343)
T 2xzm_R 214 SNVNHLSISPNGK-YIATGGKDKKLLIWDILNL--------TYPQREF-DAGSTINQIAFNPKL-QWVAVG-TDQGVKIF 281 (343)
T ss_dssp SCEEEEEECTTSS-EEEEEETTCEEEEEESSCC--------SSCSEEE-ECSSCEEEEEECSSS-CEEEEE-ESSCEEEE
T ss_pred ccceEEEECCCCC-EEEEEcCCCeEEEEECCCC--------cccceee-cCCCcEEEEEECCCC-CEEEEE-CCCCEEEE
Confidence 8999999999876 8999999999999999654 2333333 355679999999987 666654 57889999
Q ss_pred ECCCCCeeEEEEec-----------CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 433 DLSNNQPSCIASRN-----------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 433 d~~~~~~~~~~~~~-----------~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++.+.+...+..+. +|...|.+++|+|++++ |++|+.||.|++|++.++.
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~-l~sg~~Dg~v~~w~~~~g~ 342 (343)
T 2xzm_R 282 NLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKK-LFAGFTDGVIRTFSFETSA 342 (343)
T ss_dssp ESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCC-EEEEETTSEEEEEEEEEEE
T ss_pred EeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCe-EEEecCCceEEEEEEEccC
Confidence 99887644333333 67788999999999995 8999999999999987653
No 18
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=2.7e-37 Score=324.13 Aligned_cols=293 Identities=18% Similarity=0.268 Sum_probs=233.8
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
+...+.++.|+|+|++|++++. + .+.+|... .......+..|... ..|++| +|+|++||+|+.
T Consensus 17 ~~g~~~~~~~spdg~~l~~~~~-~---~v~l~~~~--~~~~~~~~~~h~~~----v~~~~~-------spdg~~lasg~~ 79 (611)
T 1nr0_A 17 ARGTAVVLGNTPAGDKIQYCNG-T---SVYTVPVG--SLTDTEIYTEHSHQ----TTVAKT-------SPSGYYCASGDV 79 (611)
T ss_dssp CTTCCCCCEECTTSSEEEEEET-T---EEEEEETT--CSSCCEEECCCSSC----EEEEEE-------CTTSSEEEEEET
T ss_pred ccCceeEEeeCCCCCEEEeCCC-C---EEEEecCC--CcccCeEecCCCCc----eEEEEE-------CCCCcEEEEEeC
Confidence 4667899999999999999873 3 45555543 32222334334322 256666 899999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC----CcEEE
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKI 293 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D----g~v~v 293 (502)
||+|+|||+..... .....+.+|...|.+++|+|++ .+|++++.+ ++|++
T Consensus 80 d~~v~lWd~~~~~~-------------------------~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~ 133 (611)
T 1nr0_A 80 HGNVRIWDTTQTTH-------------------------ILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFL 133 (611)
T ss_dssp TSEEEEEESSSTTC-------------------------CEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEE
T ss_pred CCCEEEeECCCCcc-------------------------eeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEE
Confidence 99999999864221 1122345799999999999994 578777765 46888
Q ss_pred EECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeC
Q 010769 294 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 294 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 373 (502)
|| +++....+.+|...|.+++|+|+++..|++|+.|++|++||.+..+.......|...|.+++|+|++. +|++++.
T Consensus 134 wd--~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~-~las~s~ 210 (611)
T 1nr0_A 134 FD--TGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGS-LFASTGG 210 (611)
T ss_dssp TT--TCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSS-EEEEEET
T ss_pred ee--CCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCC-EEEEEEC
Confidence 87 56677889999999999999999856799999999999999987766655667889999999999876 8999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEe-------cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeE-----
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC----- 441 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~----- 441 (502)
|+.|++||+.++ ..+..+. +|...|.+++|+|++ .+|++++.|++|++||+.+++...
T Consensus 211 D~~i~lwd~~~g---------~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~ 280 (611)
T 1nr0_A 211 DGTIVLYNGVDG---------TKTGVFEDDSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVG 280 (611)
T ss_dssp TSCEEEEETTTC---------CEEEECBCTTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECC
T ss_pred CCcEEEEECCCC---------cEeeeeccccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCC
Confidence 999999999876 4444552 799999999999998 999999999999999998765321
Q ss_pred ------------------------------------EEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010769 442 ------------------------------------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 442 ------------------------------------~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~ 485 (502)
...+.+|...|++++|+|+++ +|++++.|++|++||+.++...
T Consensus 281 ~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~~~ 359 (611)
T 1nr0_A 281 TRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGISN 359 (611)
T ss_dssp SSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCEE
T ss_pred CCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCcee
Confidence 234457899999999999999 5999999999999999988765
Q ss_pred cc
Q 010769 486 SN 487 (502)
Q Consensus 486 ~~ 487 (502)
..
T Consensus 360 ~~ 361 (611)
T 1nr0_A 360 RV 361 (611)
T ss_dssp EC
T ss_pred ee
Confidence 43
No 19
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.7e-38 Score=312.53 Aligned_cols=301 Identities=17% Similarity=0.281 Sum_probs=242.8
Q ss_pred CccccccccccCCCc-eEEEE----------EecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCC
Q 010769 138 DSEDLEDMTINPNDA-VIVCA----------RNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~-~l~~~----------~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s 206 (502)
+...|.+++|+|+++ +|++| +.++ .++||.+.............| .....|+.| +
T Consensus 11 ~~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~---~v~iw~~~~~~~~~~~~~~~~----~~~v~~~~~-------s 76 (416)
T 2pm9_A 11 EFSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDS---SLELWSLLAADSEKPIASLQV----DSKFNDLDW-------S 76 (416)
T ss_dssp EEEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCC---CCEEEESSSGGGCSCSCCCCC----SSCEEEEEE-------C
T ss_pred hhhhcceEeeCCCCCCEEEEEecCcccccccCCCC---eEEEEEccCCCCCcEEEEEec----CCceEEEEE-------C
Confidence 346799999999987 88888 4444 567777765432111111122 233468887 7
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|++++||+|+.||.|+||++...... ......+.+|...|++++|+|+++.+|++|+
T Consensus 77 ~~~~~l~~~~~dg~v~vw~~~~~~~~-----------------------~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 133 (416)
T 2pm9_A 77 HNNKIIAGALDNGSLELYSTNEANNA-----------------------INSMARFSNHSSSVKTVKFNAKQDNVLASGG 133 (416)
T ss_dssp SSSSCEEEEESSSCEEEECCSSTTSC-----------------------CCEEEECCCSSSCCCEEEECSSSTTBEEEEC
T ss_pred CCCCeEEEEccCCeEEEeeccccccc-----------------------ccchhhccCCccceEEEEEcCCCCCEEEEEc
Confidence 89999999999999999999742110 1233455689999999999998667999999
Q ss_pred cCCcEEEEECCCCe------eeEE---eccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee------
Q 010769 287 ADKQVKIWDVAAGK------CNLT---LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV------ 351 (502)
Q Consensus 287 ~Dg~v~vwd~~~~~------~~~~---~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~------ 351 (502)
.||+|++||+.+++ .... +..|...|.+++|+|++..+|++++.||.|++||+++.+.......+
T Consensus 134 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 213 (416)
T 2pm9_A 134 NNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGI 213 (416)
T ss_dssp SSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCC
T ss_pred CCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccccccc
Confidence 99999999999876 3333 36799999999999996589999999999999999987765544333
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCC---eEEEEECCCCCCCCCCCCCCccEEEe-cCCCCeeEEEEcC-CCCCEEEEEeCC
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDG---TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNP-LVPNLLATGSTD 426 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg---~i~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp-~~~~~l~t~s~d 426 (502)
...+.+++|+|++..++++++.++ .|++||+++. ..++..+. +|...|++++|+| ++ .+|++++.|
T Consensus 214 ~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~--------~~~~~~~~~~~~~~v~~~~~s~~~~-~~l~s~~~d 284 (416)
T 2pm9_A 214 KQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNA--------NTPLQTLNQGHQKGILSLDWCHQDE-HLLLSSGRD 284 (416)
T ss_dssp CCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTST--------TSCSBCCCSCCSSCEEEEEECSSCS-SCEEEEESS
T ss_pred CCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCC--------CCCcEEeecCccCceeEEEeCCCCC-CeEEEEeCC
Confidence 678999999999877999999998 9999999986 35566677 8999999999999 55 999999999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+.|++||+.+++ .+..+..|.+.|++++|+|+++.+|++++.||.|+||++.+.....
T Consensus 285 g~v~~wd~~~~~--~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~ 342 (416)
T 2pm9_A 285 NTVLLWNPESAE--QLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTL 342 (416)
T ss_dssp SEEEEECSSSCC--EEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSS
T ss_pred CCEEEeeCCCCc--cceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCc
Confidence 999999999887 5677778999999999999994479999999999999998877543
No 20
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-36 Score=300.57 Aligned_cols=300 Identities=21% Similarity=0.303 Sum_probs=232.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.+...+....+.+++..+++++.++ .|++|+...+ ...............+++| +|++++|++|+
T Consensus 89 ~~~~~~~~~~~~~s~~~l~~~~~d~-----~v~lw~~~~~---~~~~~~~~~~~~~v~~v~~-------s~~~~~l~~~~ 153 (401)
T 4aez_A 89 GIIDDYYLNLLDWSNLNVVAVALER-----NVYVWNADSG---SVSALAETDESTYVASVKW-------SHDGSFLSVGL 153 (401)
T ss_dssp TCCCCTTCBCEEECTTSEEEEEETT-----EEEEEETTTC---CEEEEEECCTTCCEEEEEE-------CTTSSEEEEEE
T ss_pred CCcCCceEEEEeecCCCEEEEECCC-----eEEEeeCCCC---cEeEeeecCCCCCEEEEEE-------CCCCCEEEEEC
Confidence 4555555555555556677888777 5555555444 2221111112344578888 78999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.+|.|+||++.... ....+.+|...|.+++|++ ++|++|+.||.|++||+
T Consensus 154 ~dg~i~iwd~~~~~---------------------------~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~ 203 (401)
T 4aez_A 154 GNGLVDIYDVESQT---------------------------KLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDV 203 (401)
T ss_dssp TTSCEEEEETTTCC---------------------------EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEET
T ss_pred CCCeEEEEECcCCe---------------------------EEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEec
Confidence 99999999997532 2224457999999999954 49999999999999999
Q ss_pred C-CCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEe--C
Q 010769 297 A-AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL--E 373 (502)
Q Consensus 297 ~-~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~--~ 373 (502)
. .+..+..+.+|...|.+++|+|++ .+|++|+.||.|++||+++.........+...|.+++|+|++..++++++ .
T Consensus 204 ~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~ 282 (401)
T 4aez_A 204 RIANHQIGTLQGHSSEVCGLAWRSDG-LQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTM 282 (401)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTT
T ss_pred ccCcceeeEEcCCCCCeeEEEEcCCC-CEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCC
Confidence 8 567788889999999999999988 89999999999999999987776656678899999999999888888876 7
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEE--EeCCCcEEEEECCCCCeeEEEEecCCCCC
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT--GSTDKMVKLWDLSNNQPSCIASRNPKAGA 451 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t--~s~dg~i~vwd~~~~~~~~~~~~~~~~~~ 451 (502)
+|.|++||+++. .++..+. |...|.+++|+|++ .+|++ |+.||.|++|++.++.......+.+|.+.
T Consensus 283 d~~i~i~d~~~~---------~~~~~~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~ 351 (401)
T 4aez_A 283 DKQIHFWNAATG---------ARVNTVD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTR 351 (401)
T ss_dssp TCEEEEEETTTC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSC
T ss_pred CCEEEEEECCCC---------CEEEEEe-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccceeEEEecCCCCC
Confidence 999999999976 5566664 67889999999998 77777 44899999999998876667777889999
Q ss_pred EEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCCCC
Q 010769 452 VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKYSK 494 (502)
Q Consensus 452 v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~~~ 494 (502)
|.+++|+|+++ +|++++.||.|++|++.+++.+.+.......
T Consensus 352 v~~~~~s~dg~-~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~ 393 (401)
T 4aez_A 352 VLYSALSPDGR-ILSTAASDENLKFWRVYDGDHVKRPIPITKT 393 (401)
T ss_dssp CCEEEECTTSS-EEEEECTTSEEEEEECCC-------------
T ss_pred EEEEEECCCCC-EEEEEeCCCcEEEEECCCCccccccccccCC
Confidence 99999999999 5999999999999999999988776554443
No 21
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=9.2e-37 Score=297.57 Aligned_cols=296 Identities=17% Similarity=0.225 Sum_probs=228.6
Q ss_pred CCccccccccccCCCceEE-EEEecCCcceeEEEEEecCCCCCCcee-eeeccccCCCcceeeeecCCCCCCCC---CCE
Q 010769 137 EDSEDLEDMTINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLY-VHHHIIIPAFPLCMAWLDCPLKDREK---GNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~-~~~~~~~~~~l~v~~~~~~~~~~~~l~-~~~~~~~~~~~~~~~w~~~~~~~s~~---~~~ 211 (502)
.|...|.+++|+|++..++ +|+.+.....+.||.+..... ..+. ..| .....|+.| +|+ +++
T Consensus 16 ~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~--~~~~~~~~----~~~v~~~~~-------~~~~~~~~~ 82 (357)
T 3i2n_A 16 GFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL--KLLREIEK----AKPIKCGTF-------GATSLQQRY 82 (357)
T ss_dssp ECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE--EEEEEEEE----SSCEEEEEC-------TTCCTTTCC
T ss_pred CCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc--cceeeecc----cCcEEEEEE-------cCCCCCCce
Confidence 4888999999999996555 554411123677777765432 0111 123 233477777 565 799
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEe------cCCCCcEEEEE
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW------NKEFRNILASA 285 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~------~~~~~~~l~sg 285 (502)
|++|+.+|.|++|++.... .....+.+|...|.++.| +|+ +.+|++|
T Consensus 83 l~~~~~dg~i~iwd~~~~~--------------------------~~~~~~~~~~~~v~~~~~~~~~~~s~~-~~~l~~~ 135 (357)
T 3i2n_A 83 LATGDFGGNLHIWNLEAPE--------------------------MPVYSVKGHKEIINAIDGIGGLGIGEG-APEIVTG 135 (357)
T ss_dssp EEEEETTSCEEEECTTSCS--------------------------SCSEEECCCSSCEEEEEEESGGGCC-C-CCEEEEE
T ss_pred EEEecCCCeEEEEeCCCCC--------------------------ccEEEEEecccceEEEeeccccccCCC-ccEEEEE
Confidence 9999999999999997532 122345579999999955 667 5699999
Q ss_pred ecCCcEEEEECCCCe-eeEEeccCCC----CeEEEE----EcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeE
Q 010769 286 SADKQVKIWDVAAGK-CNLTLEHHTD----KVQAVA----WNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVE 356 (502)
Q Consensus 286 s~Dg~v~vwd~~~~~-~~~~~~~h~~----~v~~l~----~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~ 356 (502)
+.||.|++||+.+++ ++..+..|.. .|.++. |+|++ .+|++++.||.|++||+++..... ...+...+.
T Consensus 136 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~-~~~~~~~v~ 213 (357)
T 3i2n_A 136 SRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMALRW-ETNIKNGVC 213 (357)
T ss_dssp ETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTEEEE-EEECSSCEE
T ss_pred eCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCceee-ecCCCCceE
Confidence 999999999999887 6777766554 899998 67888 899999999999999999877633 567788999
Q ss_pred EEEeCC---CCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccE-----EEecCCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010769 357 SLAWDP---HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF-----TLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 357 ~v~~~p---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~-----~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
+++|+| ++. ++++++.+|.|++||+++. .+.. .+..|...|++++|+|+++.+|++++.||.
T Consensus 214 ~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 283 (357)
T 3i2n_A 214 SLEFDRKDISMN-KLVATSLEGKFHVFDMRTQ---------HPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG 283 (357)
T ss_dssp EEEESCSSSSCC-EEEEEESTTEEEEEEEEEE---------ETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE
T ss_pred EEEcCCCCCCCC-EEEEECCCCeEEEEeCcCC---------CcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc
Confidence 999999 554 8999999999999999876 3333 334899999999999998448999999999
Q ss_pred EEEEECCCCCe-----------------eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 429 VKLWDLSNNQP-----------------SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 429 i~vwd~~~~~~-----------------~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
|++||++.... ..+..+..|.+.|++++|+|++++++++++.||.|+||++.+...
T Consensus 284 i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 284 LHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 99999986432 357778889999999999999997444899999999999987654
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3e-36 Score=316.10 Aligned_cols=299 Identities=15% Similarity=0.154 Sum_probs=237.0
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|+|++||+|+.++ .++||............+..| .....+++| +|++++||++
T Consensus 56 ~~h~~~v~~~~~spdg~~lasg~~d~---~v~lWd~~~~~~~~~~~~~~~----~~~v~~v~f-------s~dg~~l~~~ 121 (611)
T 1nr0_A 56 TEHSHQTTVAKTSPSGYYCASGDVHG---NVRIWDTTQTTHILKTTIPVF----SGPVKDISW-------DSESKRIAAV 121 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---EEEEEESSSTTCCEEEEEECS----SSCEEEEEE-------CTTSCEEEEE
T ss_pred cCCCCceEEEEECCCCcEEEEEeCCC---CEEEeECCCCcceeeEeeccc----CCceEEEEE-------CCCCCEEEEE
Confidence 35888999999999999999999887 567776543322000011112 223467777 8999999998
Q ss_pred cCC----CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 216 SME----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 216 ~~d----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
+.+ +.|++|+... ....+.+|...|++++|+|++..+|++|+.|++|
T Consensus 122 ~~~~~~~~~v~~wd~~~-----------------------------~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v 172 (611)
T 1nr0_A 122 GEGRERFGHVFLFDTGT-----------------------------SNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTV 172 (611)
T ss_dssp ECCSSCSEEEEETTTCC-----------------------------BCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCE
T ss_pred ECCCCceeEEEEeeCCC-----------------------------CcceecCCCCCceEEEECCCCCeEEEEEeCCCeE
Confidence 865 4788887531 1123458999999999999966679999999999
Q ss_pred EEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-------eecCCeEEEEeCCCC
Q 010769 292 KIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-------AVAADVESLAWDPHA 364 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~v~~~p~~ 364 (502)
++||..+++++.++.+|...|.+++|+|++ .+|++|+.|++|++||++++....... .|...|.+++|+|++
T Consensus 173 ~lwd~~~~~~~~~l~~H~~~V~~v~fspdg-~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg 251 (611)
T 1nr0_A 173 AIFEGPPFKFKSTFGEHTKFVHSVRYNPDG-SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDG 251 (611)
T ss_dssp EEEETTTBEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTS
T ss_pred EEEECCCCeEeeeeccccCceEEEEECCCC-CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCC
Confidence 999999999999999999999999999999 899999999999999998876544331 588899999999987
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCC----------------------------------CCCCccEEEecCCCCeeEE
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDS----------------------------------TSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~----------------------------------~~~~~~~~~~~h~~~v~~l 410 (502)
. +|++++.|++|++||++++...... ....+...+.+|...|+++
T Consensus 252 ~-~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l 330 (611)
T 1nr0_A 252 T-KIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITAL 330 (611)
T ss_dssp S-EEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEE
T ss_pred C-EEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEE
Confidence 6 8999999999999999875321000 0011234556899999999
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 411 SYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
+|+|++ .+|++++.|++|++||+.++.. ...+ ..|...|.+++|++++. |++++.|+.+++|++.++..
T Consensus 331 ~~spdg-~~l~s~s~D~~v~~Wd~~~~~~--~~~~~~~h~~~v~~~~~s~~~~--l~s~s~d~~v~~w~~~~~~~ 400 (611)
T 1nr0_A 331 SSSADG-KTLFSADAEGHINSWDISTGIS--NRVFPDVHATMITGIKTTSKGD--LFTVSWDDHLKVVPAGGSGV 400 (611)
T ss_dssp EECTTS-SEEEEEETTSCEEEEETTTCCE--EECSSCSCSSCEEEEEECTTSC--EEEEETTTEEEEECSSSSSS
T ss_pred EEeCCC-CEEEEEeCCCcEEEEECCCCce--eeecccCCcceEEEEEECCCCc--EEEEEcCCceEEeecCCccc
Confidence 999998 9999999999999999998873 3333 56889999999998874 78899999999999877543
No 23
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=6.6e-37 Score=299.46 Aligned_cols=306 Identities=15% Similarity=0.199 Sum_probs=235.9
Q ss_pred CCCccccccccccCC----CceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010769 136 DEDSEDLEDMTINPN----DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~----~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~ 211 (502)
+.|...|.+++|+|+ ..++++++.++ .+.||.+..... ...+..|..........+++|.+- ..+++++
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~---~v~vw~~~~~~~-~~~~~~~~~~~~~~~v~~~~~~~~---~~~~~~~ 87 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSN---RVTLYECHSQGE-IRLLQSYVDADADENFYTCAWTYD---SNTSHPL 87 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETT---EEEEEEECGGGC-EEEEEEEECSCTTCCEEEEEEEEC---TTTCCEE
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCC---EEEEEEcCCCcE-EEeeeeccccCCCCcEEEEEeccC---CCCCCCE
Confidence 358899999999994 55666666665 567777764432 112223333223345578888421 1122789
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
|++|+.||.|+||++.... ....+.+|...|.+++|+|..+.+|++|+.||+|
T Consensus 88 l~~~~~dg~i~v~d~~~~~---------------------------~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i 140 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITMQ---------------------------CIKHYVGHGNAINELKFHPRDPNLLLSVSKDHAL 140 (366)
T ss_dssp EEEEETTCEEEEECTTTCC---------------------------EEEEEESCCSCEEEEEECSSCTTEEEEEETTSCE
T ss_pred EEEecCCCEEEEEEchhce---------------------------EeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeE
Confidence 9999999999999987532 2223457999999999999437799999999999
Q ss_pred EEEECCCCeeeEEe---ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-------------------
Q 010769 292 KIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW------------------- 349 (502)
Q Consensus 292 ~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~------------------- 349 (502)
++||+.+++.+..+ ..|...|.+++|+|++ .+|++++.||.|++||+++........
T Consensus 141 ~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 141 RLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEETTTTEEEEEECSTTSCSSCEEEEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEeecCeEEEEecccccccCceeEEEECCCC-CEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 99999999999888 6899999999999998 899999999999999998754332111
Q ss_pred ---------eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC-----CCCCCccEEEecCCCCeeEEEEcCC
Q 010769 350 ---------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-----STSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 350 ---------~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
.+...|.+++|+ + .++++++.+|.|++||+++...... ......+..+..|...|++++|+|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 296 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMD 296 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEEC
T ss_pred ccCccccccCCcceEEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCC
Confidence 177889999998 3 3899999999999999987632100 0011346777889999999999998
Q ss_pred --CCCEEEEEeCCCcEEEEECCCCCee--EEEEecCC--CCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 416 --VPNLLATGSTDKMVKLWDLSNNQPS--CIASRNPK--AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 416 --~~~~l~t~s~dg~i~vwd~~~~~~~--~~~~~~~~--~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+ .+|++|+.||.|++||+.++++. ....+..| ...|++++|+|+++ +|++++.||.|++||+.+
T Consensus 297 ~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~ 366 (366)
T 3k26_A 297 FWQ-KMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRLR 366 (366)
T ss_dssp TTS-SEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred CCC-cEEEEEecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEecC
Confidence 7 99999999999999999987642 34455666 78999999999999 599999999999999853
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=2.9e-36 Score=293.02 Aligned_cols=250 Identities=21% Similarity=0.298 Sum_probs=215.7
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.++.| +|++++|++|+.||.|+|||+..... ...+..|...|.+++
T Consensus 59 ~~~~~-------s~d~~~l~s~s~Dg~v~iWd~~~~~~---------------------------~~~~~~~~~~v~~~~ 104 (340)
T 1got_B 59 YAMHW-------GTDSRLLLSASQDGKLIIWDSYTTNK---------------------------VHAIPLRSSWVMTCA 104 (340)
T ss_dssp EEEEE-------CTTSSEEEEEETTTEEEEEETTTCCE---------------------------EEEEECSSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCcEEEEECCCCCc---------------------------ceEeecCCccEEEEE
Confidence 67777 78999999999999999999875322 223346889999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCC----eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 349 (502)
|+|+ +.+|++|+.|+.|++|++.++ +....+.+|...|.++.|++++ .+++++.|++|++||++++.......
T Consensus 105 ~s~~-~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~~~~~~~ 181 (340)
T 1got_B 105 YAPS-GNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQQTTTFT 181 (340)
T ss_dssp ECTT-SSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred ECCC-CCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCcEEEEEc
Confidence 9999 569999999999999999875 4566788999999999999876 58999999999999999887776666
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
.|...|.+++|+|++. ++++|+.||.|++||+++. .+...+.+|...|++++|+|++ .+|++|+.|++|
T Consensus 182 ~h~~~v~~~~~~~~~~-~l~sg~~d~~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v 250 (340)
T 1got_B 182 GHTGDVMSLSLAPDTR-LFVSGACDASAKLWDVREG---------MCRQTFTGHESDINAICFFPNG-NAFATGSDDATC 250 (340)
T ss_dssp CCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------SEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCCCceEEEEECCCCC-EEEEEeCCCcEEEEECCCC---------eeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcE
Confidence 7889999999999865 8999999999999999986 6788899999999999999998 999999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
++||++..+.........+...|.+++|+|+++ +|++|+.||.|++||+.++..+..+.+|.
T Consensus 251 ~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~~~~h~ 312 (340)
T 1got_B 251 RLFDLRADQELMTYSHDNIICGITSVSFSKSGR-LLLAGYDDFNCNVWDALKADRAGVLAGHD 312 (340)
T ss_dssp EEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred EEEECCCCcEEEEEccCCcccceEEEEECCCCC-EEEEECCCCeEEEEEcccCcEeeEeecCC
Confidence 999999887544444444556899999999999 59999999999999999988877665543
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=1.6e-35 Score=286.27 Aligned_cols=288 Identities=16% Similarity=0.294 Sum_probs=236.2
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++++ ++ .+.+|.+....... .+.............++.| +|++++|++|+
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~-dg---~i~iw~~~~~~~~~-~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~~ 116 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGG-KG---CVKVWDISHPGNKS-PVSQLDCLNRDNYIRSCKL-------LPDGCTLIVGG 116 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEEC-BS---EEEEEETTSTTCCS-CSEEEECSCTTSBEEEEEE-------CTTSSEEEEEE
T ss_pred cCCCceEEEEEecCCcEEEEcC-CC---eEEEEECCCCCcee-eeecccccCCCCcEEEEEE-------cCCCCEEEEEc
Confidence 4788999999999999999998 65 56666655433211 1111110112233467777 78999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.+|.|++|++.... ......+..|...|.+++|+|+ +.+|++++.||.|++||+
T Consensus 117 ~d~~i~~~d~~~~~-------------------------~~~~~~~~~~~~~i~~~~~~~~-~~~l~~~~~dg~v~~~d~ 170 (337)
T 1gxr_A 117 EASTLSIWDLAAPT-------------------------PRIKAELTSSAPACYALAISPD-SKVCFSCCSDGNIAVWDL 170 (337)
T ss_dssp SSSEEEEEECCCC---------------------------EEEEEEECSSSCEEEEEECTT-SSEEEEEETTSCEEEEET
T ss_pred CCCcEEEEECCCCC-------------------------cceeeecccCCCceEEEEECCC-CCEEEEEeCCCcEEEEeC
Confidence 99999999997532 1122344578899999999998 669999999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
.+++.+..+..|...|.+++|+|++ .+|++++.||.|++||+++.+... ...+...+.+++|+|++. ++++++.+|.
T Consensus 171 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~-~~~~~~~v~~~~~s~~~~-~l~~~~~~~~ 247 (337)
T 1gxr_A 171 HNQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQLQ-QHDFTSQIFSLGYCPTGE-WLAVGMESSN 247 (337)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEECTTSS-EEEEEETTSC
T ss_pred CCCceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCceEe-eecCCCceEEEEECCCCC-EEEEEcCCCc
Confidence 9999999999999999999999998 899999999999999999876554 456788899999999875 8999999999
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEE
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
|++||+++. ....+..|...|.+++|+|++ .+|++++.||.|++|++.+++.. . ...|...|.+++
T Consensus 248 i~~~~~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~~~~~~~~~~~--~-~~~~~~~v~~~~ 313 (337)
T 1gxr_A 248 VEVLHVNKP----------DKYQLHLHESCVLSLKFAYCG-KWFVSTGKDNLLNAWRTPYGASI--F-QSKESSSVLSCD 313 (337)
T ss_dssp EEEEETTSS----------CEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCCEE--E-EEECSSCEEEEE
T ss_pred EEEEECCCC----------CeEEEcCCccceeEEEECCCC-CEEEEecCCCcEEEEECCCCeEE--E-EecCCCcEEEEE
Confidence 999999875 245678899999999999998 89999999999999999998743 2 234678899999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECC
Q 010769 457 FSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 457 ~spd~~~llasg~~dg~i~vwd~~ 480 (502)
|+|+++ +|++++.||.|++|++.
T Consensus 314 ~s~~~~-~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 314 ISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp ECTTSC-EEEEEETTSCEEEEEEE
T ss_pred ECCCCC-EEEEecCCCeEEEEEEe
Confidence 999999 58899999999999973
No 26
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.5e-37 Score=305.36 Aligned_cols=306 Identities=19% Similarity=0.254 Sum_probs=241.0
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCC-CCEEEEe
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREK-GNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~-~~~la~g 215 (502)
.|...|.+++|+|++++|++|+.++ .+.+|.+.........+. .-........|+.| +|+ +++|++|
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg---~v~vw~~~~~~~~~~~~~--~~~~h~~~v~~~~~-------~~~~~~~l~s~ 132 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNG---SLELYSTNEANNAINSMA--RFSNHSSSVKTVKF-------NAKQDNVLASG 132 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSS---CEEEECCSSTTSCCCEEE--ECCCSSSCCCEEEE-------CSSSTTBEEEE
T ss_pred ecCCceEEEEECCCCCeEEEEccCC---eEEEeecccccccccchh--hccCCccceEEEEE-------cCCCCCEEEEE
Confidence 4778999999999999999999887 567776655221110111 11112233467777 677 8999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.||.|++||+......... ..........+|...|.+++|+|+++.+|++|+.||.|++||
T Consensus 133 ~~dg~v~iwd~~~~~~~~~~------------------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd 194 (416)
T 2pm9_A 133 GNNGEIFIWDMNKCTESPSN------------------YTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWD 194 (416)
T ss_dssp CSSSCEEBCBTTTTSSCTTT------------------CCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEE
T ss_pred cCCCeEEEEECCCCcccccc------------------ccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEE
Confidence 99999999999764311000 001111234579999999999999778999999999999999
Q ss_pred CCCCeeeEEeccC------CCCeEEEEEcCCCCcEEEEEECCC---cEEEEeCCCCC-CccceE-eecCCeEEEEeCCCC
Q 010769 296 VAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARIST-HSGFKW-AVAADVESLAWDPHA 364 (502)
Q Consensus 296 ~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s~~~dg---~i~vwd~~~~~-~~~~~~-~~~~~v~~v~~~p~~ 364 (502)
+.+++++..+..| ...|.+++|+|++..+|++++.++ .|++||+++.. ...... .|...|.+++|+|.+
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 195 LKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp TTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred CCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 9999999988776 789999999999878999999999 99999999864 444444 688999999999944
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE--
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI-- 442 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~-- 442 (502)
..++++++.||.|++||+++. .++..+..|...|.+++|+|+++.+|++++.|+.|++|++........
T Consensus 275 ~~~l~s~~~dg~v~~wd~~~~---------~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~ 345 (416)
T 2pm9_A 275 EHLLLSSGRDNTVLLWNPESA---------EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQ 345 (416)
T ss_dssp SSCEEEEESSSEEEEECSSSC---------CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC-
T ss_pred CCeEEEEeCCCCEEEeeCCCC---------ccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccc
Confidence 558999999999999999986 778889999999999999999878999999999999999987652111
Q ss_pred -------------EEe------------------cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 443 -------------ASR------------------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 443 -------------~~~------------------~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
... ..|..++.+++|+|+|+ +|++|+.||.|+||++.+.
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 346 ETETKQQESETDFWNNVSREESKEKPSVFHLQAPTWYGEPSPAAHWAFGGK-LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp ---------------------CCSCCCSSCCCCCSTTCCCSCCCEEETTTE-EECBCTTSSCBCCBCCCCC
T ss_pred cccccccCCcccccccccccccccccccccccCCccccCCccceEEeeCCe-EEEEeCCCCeEEEEEeccC
Confidence 000 11567788999999999 5999999999999999864
No 27
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.4e-36 Score=312.71 Aligned_cols=278 Identities=24% Similarity=0.381 Sum_probs=231.4
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++++.++ .+++|..+.... ..+..| ...+.+++| +|++++|++|
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~---~i~~w~~~~~~~--~~~~~~-----~~~v~~~~~-------s~~g~~l~~~ 362 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDK---TVKLWNRNGQHL--QTLTGH-----SSSVWGVAF-------SPDGQTIASA 362 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTSCEE--EEECCC-----SSCEEEEEE-------CTTSSEEEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCC---eEEEEeCCCCee--EEEeCC-----CCCEEEEEE-------CCCCCEEEEE
Confidence 34778999999999999999999887 566765432211 111112 222356655 7999999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.+|.|++|+... .....+.+|...|.+++|+|+ +.+|++++.|+.|++||
T Consensus 363 ~~dg~v~~~~~~~----------------------------~~~~~~~~~~~~v~~~~~s~d-g~~l~~~~~d~~v~~~~ 413 (577)
T 2ymu_A 363 SDDKTVKLWNRNG----------------------------QLLQTLTGHSSSVRGVAFSPD-GQTIASASDDKTVKLWN 413 (577)
T ss_dssp ETTSEEEEEETTC----------------------------CEEEEEECCSSCEEEEEECTT-SSCEEEEETTSEEEEEC
T ss_pred eCCCEEEEEcCCC----------------------------CEEEEecCCCCCeEEEEECCC-CCEEEEEeCCCEEEEEe
Confidence 9999999999642 122234579999999999999 56899999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
. +++.+..+.+|...|++++|+|++ .+|++++.|+.|++||... +.......|...|.+++|+|++. ++++++.|+
T Consensus 414 ~-~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~v~~w~~~~-~~~~~~~~~~~~v~~~~~spd~~-~las~~~d~ 489 (577)
T 2ymu_A 414 R-NGQLLQTLTGHSSSVWGVAFSPDD-QTIASASDDKTVKLWNRNG-QLLQTLTGHSSSVRGVAFSPDGQ-TIASASDDK 489 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTS-CEEEEEECCSSCEEEEEECTTSC-EEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCC-CEEEEEcCCCEEEEEECCC-CEEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCC
Confidence 5 577888899999999999999999 8999999999999999753 44445667889999999999876 899999999
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEE
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||.. + ..+..+.+|...|++++|+|++ ++|++++.|+.|+|||.. ++ ++..+.+|.+.|+++
T Consensus 490 ~i~iw~~~-~---------~~~~~~~~h~~~v~~l~~s~dg-~~l~s~~~dg~v~lwd~~-~~--~~~~~~~h~~~v~~~ 555 (577)
T 2ymu_A 490 TVKLWNRN-G---------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVWGV 555 (577)
T ss_dssp EEEEEETT-S---------CEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-SC--EEEEEECCSSCEEEE
T ss_pred EEEEEcCC-C---------CEEEEEeCCCCCEEEEEEcCCC-CEEEEEECcCEEEEEeCC-CC--EEEEEcCCCCCEEEE
Confidence 99999954 2 6788899999999999999998 899999999999999964 44 567788999999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEE
Q 010769 456 AFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 456 ~~spd~~~llasg~~dg~i~vwd 478 (502)
+|+|++++ |++++.|++|++||
T Consensus 556 ~fs~dg~~-l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 556 AFSPDGQT-IASASSDKTVKLWN 577 (577)
T ss_dssp EECTTSSC-EEEEETTSCEEEEC
T ss_pred EEcCCCCE-EEEEeCCCEEEEeC
Confidence 99999995 88999999999997
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.2e-36 Score=297.69 Aligned_cols=252 Identities=19% Similarity=0.214 Sum_probs=203.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecC------CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccc
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSM------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD 267 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~------dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 267 (502)
.|++| ||+|++||+|+. |+.|++|+....... ........+|..
T Consensus 46 ~~v~f-------SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~-----------------------~~~~~~~~~~~~ 95 (357)
T 4g56_B 46 GAVRY-------RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPN-----------------------ESLCTAGVQTEA 95 (357)
T ss_dssp EEEEE-------CSSSCEEEEEECSSSSSCCEEEEEESSCC---C-----------------------GGGCSEEEECSS
T ss_pred EEEEE-------CCCCCEEEEEcCCCCccccCeEEEEECCCCCcc-----------------------eeEecccCCCCC
Confidence 56666 899999999997 678889987643221 112223346889
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeE----EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~----~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 343 (502)
.|++++|+|+ + .+++++.||+|+|||+.+++... ...+|...|++++|+|++ ++|++|+.|++|++||+++++
T Consensus 96 ~V~~~~~s~d-~-~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~ 172 (357)
T 4g56_B 96 GVTDVAWVSE-K-GILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA 172 (357)
T ss_dssp CEEEEEEETT-T-EEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE
T ss_pred CEEEEEEcCC-C-CEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc
Confidence 9999999998 4 56678899999999999886543 335799999999999999 899999999999999999988
Q ss_pred CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE
Q 010769 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.......|...|.+++|+|++..++++++.||.|++||++++.. ........|...+++++|+|+++.+|++|
T Consensus 173 ~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~-------~~~~~~~~~~~~v~~v~~sp~~~~~la~g 245 (357)
T 4g56_B 173 VLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKP-------ATRIDFCASDTIPTSVTWHPEKDDTFACG 245 (357)
T ss_dssp EEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSC-------BCBCCCTTCCSCEEEEEECTTSTTEEEEE
T ss_pred EEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCce-------eeeeeeccccccccchhhhhcccceEEEe
Confidence 77766678899999999998877899999999999999998732 22233456778899999999877899999
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
+.|+.|++||+++++ ++..+..|...|++++|+|++..+||+|+.||+|+|||+.+++.++.
T Consensus 246 ~~d~~i~~wd~~~~~--~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 246 DETGNVSLVNIKNPD--SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp ESSSCEEEEESSCGG--GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred ecccceeEEECCCCc--EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 999999999999887 46677889999999999999865799999999999999999877653
No 29
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.6e-36 Score=290.41 Aligned_cols=251 Identities=18% Similarity=0.231 Sum_probs=203.2
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
++..|.+++|+|++ .|++|+.++ .++||.++..... ...............|++| +|+|++||+|+.
T Consensus 81 ~~~~v~~~~~s~d~-~l~~~s~dg---~v~lWd~~~~~~~--~~~~~~~~~H~~~V~~v~~-------spdg~~l~sgs~ 147 (344)
T 4gqb_B 81 TEAGVADLTWVGER-GILVASDSG---AVELWELDENETL--IVSKFCKYEHDDIVSTVSV-------LSSGTQAVSGSK 147 (344)
T ss_dssp ESSCEEEEEEETTT-EEEEEETTS---EEEEEEECTTSSC--EEEEEEEECCSSCEEEEEE-------CTTSSEEEEEET
T ss_pred cCCCEEEEEEeCCC-eEEEEECCC---EEEEEeccCCCce--eEeeccccCCCCCEEEEEE-------CCCCCEEEEEeC
Confidence 45679999999986 566777776 6788877665431 1111100011223367777 799999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
|+.|+|||+.++ .....+.+|...|++++|+|++..+|++|+.|++|++||++
T Consensus 148 d~~i~iwd~~~~---------------------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~ 200 (344)
T 4gqb_B 148 DICIKVWDLAQQ---------------------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTR 200 (344)
T ss_dssp TSCEEEEETTTT---------------------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred CCeEEEEECCCC---------------------------cEEEEEcCcCCceEEEEecCCCCCceeeecccccccccccc
Confidence 999999999753 23335568999999999999977899999999999999999
Q ss_pred CCeeeEEec--cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 298 AGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 298 ~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
++++...+. .|...+.+++|+|.+..+|++|+.||+|++||+++++....+..|...|.+++|+|++..+|++|+.||
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~ 280 (344)
T 4gqb_B 201 CPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDC 280 (344)
T ss_dssp SSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTS
T ss_pred ccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCC
Confidence 999888774 456689999999988789999999999999999999888777889999999999999877899999999
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
+|++||++++ .+..+.+|...|++++|+|+++.+|++|+.|++|++|++.+..
T Consensus 281 ~i~vwd~~~~----------~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 281 SLAVLDSSLS----------ELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp CEEEECTTCC----------EEEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred eEEEEECCCC----------cEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 9999999875 3456789999999999999987789999999999999998754
No 30
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.5e-35 Score=282.30 Aligned_cols=249 Identities=23% Similarity=0.333 Sum_probs=203.0
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|+.|+||++.... ......+.+|...|++++
T Consensus 13 ~~~~~-------s~~g~~las~s~D~~v~iw~~~~~~-------------------------~~~~~~l~gH~~~V~~v~ 60 (297)
T 2pm7_B 13 HDAVM-------DYYGKRMATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 60 (297)
T ss_dssp EEEEE-------CTTSSEEEEEETTSCEEEEEBCSSC-------------------------BCCCEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCEEEEEecCCCC-------------------------cEEEEEEccccCCeEEEE
Confidence 56666 7999999999999999999986321 122335568999999999
Q ss_pred ecCC-CCcEEEEEecCCcEEEEECCCCe--eeEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCC--cc
Q 010769 274 WNKE-FRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SG 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~ 346 (502)
|++. .+.+|++|+.|++|+|||+.+++ .+..+.+|...|.+++|+|+ + .+|++++.|++|++||++.... ..
T Consensus 61 ~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~~~~ 139 (297)
T 2pm7_B 61 WAHPKFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTTSPI 139 (297)
T ss_dssp ECCGGGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCBCCE
T ss_pred ecCCCcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCceeee
Confidence 9863 25699999999999999999874 56677889999999999997 5 7999999999999999987642 23
Q ss_pred ceEeecCCeEEEEeCCCC------------CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC
Q 010769 347 FKWAVAADVESLAWDPHA------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....|...|.+++|+|.+ ..+|++|+.|+.|++||+++.... ......+.+|...|.+++|+|
T Consensus 140 ~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~-----~~~~~~l~~H~~~V~~v~~sp 214 (297)
T 2pm7_B 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 214 (297)
T ss_dssp EEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred eeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCce-----EEEEEEecCCCCceEEEEECC
Confidence 345678899999999963 358999999999999999875210 014567889999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCe-eEEEEe--cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 415 LV--PNLLATGSTDKMVKLWDLSNNQP-SCIASR--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~-~~~~~~--~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
++ +.+|++++.|++|+|||+..... .....+ ..|...|.+++|+|++++ ||+++.||.|+||+...
T Consensus 215 ~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 215 TVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENL 285 (297)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEETTSCEEEEEECT
T ss_pred CCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCE-EEEEcCCCcEEEEEECC
Confidence 85 48999999999999999987431 112222 567889999999999994 99999999999999863
No 31
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=2.2e-35 Score=288.29 Aligned_cols=252 Identities=21% Similarity=0.313 Sum_probs=216.2
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||+|+|||...... ...+..|...|.+++
T Consensus 68 ~~~~~-------s~d~~~l~s~s~Dg~v~vWd~~~~~~---------------------------~~~~~~~~~~v~~~~ 113 (354)
T 2pbi_B 68 LCMDW-------CKDKRRIVSSSQDGKVIVWDSFTTNK---------------------------EHAVTMPCTWVMACA 113 (354)
T ss_dssp EEEEE-------CTTSSEEEEEETTSEEEEEETTTCCE---------------------------EEEEECSSSCCCEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCeEEEEECCCCCc---------------------------ceEEecCCCCEEEEE
Confidence 68888 78999999999999999999864321 122345788999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCC------eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAG------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
|+|+ +.+|++|+.|+.+++|++... .....+.+|...|.+++|+|++ ..|++++.|++|++||+++++....
T Consensus 114 ~sp~-g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~~~~~ 191 (354)
T 2pbi_B 114 YAPS-GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQLLQS 191 (354)
T ss_dssp ECTT-SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCCEEEE
T ss_pred ECCC-CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCeEEEE
Confidence 9999 569999999999999998643 3456677899999999999998 8899999999999999999887776
Q ss_pred eEeecCCeEEEEeCCCC-CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 348 KWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
...|...|.+++|+|.. ..+|++|+.||.|++||++++ .++..+..|...|++++|+|++ .+|++|+.|
T Consensus 192 ~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~---------~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D 261 (354)
T 2pbi_B 192 FHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSG---------QCVQAFETHESDVNSVRYYPSG-DAFASGSDD 261 (354)
T ss_dssp EECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred EcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCeEEEEEeCCC-CEEEEEeCC
Confidence 77888999999999853 358999999999999999986 6788889999999999999998 899999999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
++|++||++..+.........+...+.+++|+|++. +|++|+.|+.|++||+.++..+..+.+|.
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~-~l~~g~~d~~i~vwd~~~~~~~~~l~~h~ 326 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGR-LLFAGYNDYTINVWDVLKGSRVSILFGHE 326 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCSEEEEECCCS
T ss_pred CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCC-EEEEEECCCcEEEEECCCCceEEEEECCC
Confidence 999999999887544444444556799999999999 59999999999999999998877666554
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=3.5e-36 Score=300.74 Aligned_cols=286 Identities=16% Similarity=0.183 Sum_probs=221.9
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
..+.+++|+|++++|++|+.++ .+.+|.+..... ......|. . .++.+ +++++++||+|+.+|
T Consensus 57 ~~~~~~~~s~~g~~l~~~~~d~---~v~i~d~~~~~~--~~~~~~~~-----~-~~~~~------~~~~~~~l~~~~~dg 119 (420)
T 3vl1_A 57 DAGKGNTFEKVGSHLYKARLDG---HDFLFNTIIRDG--SKMLKRAD-----Y-TAVDT------AKLQMRRFILGTTEG 119 (420)
T ss_dssp BCCTTCEEEEEETTEEEEEETT---EEEEEECCSEET--TTTSCSCC-----E-EEEEE------ECSSSCEEEEEETTS
T ss_pred ccccceeeeecCCeEEEEEcCC---cEEEEEecccce--eeEEecCC-----c-eEEEE------EecCCCEEEEEECCC
Confidence 4567899999999999999987 445555443321 11111111 1 22222 178999999999999
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|+||++... .....+.+|...|++++|+|+ +.+|++|+.|++|++||+.++
T Consensus 120 ~i~iwd~~~~---------------------------~~~~~~~~h~~~v~~~~~~~~-~~~l~s~s~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 120 DIKVLDSNFN---------------------------LQREIDQAHVSEITKLKFFPS-GEALISSSQDMQLKIWSVKDG 171 (420)
T ss_dssp CEEEECTTSC---------------------------EEEEETTSSSSCEEEEEECTT-SSEEEEEETTSEEEEEETTTC
T ss_pred CEEEEeCCCc---------------------------ceeeecccccCccEEEEECCC-CCEEEEEeCCCeEEEEeCCCC
Confidence 9999998642 222344589999999999999 569999999999999999999
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe---ec---------------------CCe
Q 010769 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---VA---------------------ADV 355 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~---------------------~~v 355 (502)
+.+..+.+|...|.+++|+|++ .+|++++.||.|++||+++++....... +. ..+
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRG-RNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTT-TEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 9999999999999999999998 8999999999999999998765443322 22 345
Q ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 010769 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 434 (502)
Q Consensus 356 ~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~ 434 (502)
.+++|+|++. ++++|+.+|.|++||+++. ..+..+ ..|...|++++|+|++..+|++|+.||.|++||+
T Consensus 251 ~~~~~s~~~~-~l~~~~~dg~i~i~d~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~ 320 (420)
T 3vl1_A 251 NNLEFGTYGK-YVIAGHVSGVITVHNVFSK---------EQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDL 320 (420)
T ss_dssp CTTCSSCTTE-EEEEEETTSCEEEEETTTC---------CEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred cceEEcCCCC-EEEEEcCCCeEEEEECCCC---------ceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEc
Confidence 5556678664 8999999999999999987 344444 4688999999999998449999999999999999
Q ss_pred CCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 435 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++++.........|...|.++.|. ++. +|++++.||.|++|++....
T Consensus 321 ~~~~~~~~~~~~~~~~~v~~~~~~-~~~-~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 321 RSPECPVGEFLINEGTPINNVYFA-AGA-LFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp TCTTSCSEEEEESTTSCEEEEEEE-TTE-EEEEETTTEEEEEEEECCTT
T ss_pred CCCcCchhhhhccCCCCceEEEeC-CCC-EEEEecCCccEEEEeccCCC
Confidence 987532222223367788888665 666 59999999999999998743
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.5e-36 Score=297.94 Aligned_cols=290 Identities=16% Similarity=0.285 Sum_probs=236.7
Q ss_pred CccccccccccCCCc-eEEEEEecCCcceeEEEEE----ecCCCC---CCceeeeeccc-------cCCCcceeeeecCC
Q 010769 138 DSEDLEDMTINPNDA-VIVCARNEDDVSHLEVYIL----EESDGG---DPNLYVHHHII-------IPAFPLCMAWLDCP 202 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~-~l~~~~~~~~~~~l~v~~~----~~~~~~---~~~l~~~~~~~-------~~~~~~~~~w~~~~ 202 (502)
|...|.+++|+|+++ +|++|+.++ .+.+|.+ ...... .......+... ......|++|
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---- 116 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNS---VARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAW---- 116 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBT---EEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEE----
T ss_pred ccCceEEEEECCCCCcEEEEecCCc---eEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEE----
Confidence 557899999999999 999999876 6677777 433200 00111111000 1223467777
Q ss_pred CCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 203 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+|++++|++|+.+|.|+||+.. ......+.+|...|.+++|+|+ +.+|
T Consensus 117 ---s~~~~~l~~~~~dg~i~i~~~~----------------------------~~~~~~~~~~~~~v~~~~~~~~-~~~l 164 (425)
T 1r5m_A 117 ---SHDGNSIVTGVENGELRLWNKT----------------------------GALLNVLNFHRAPIVSVKWNKD-GTHI 164 (425)
T ss_dssp ---CTTSSEEEEEETTSCEEEEETT----------------------------SCEEEEECCCCSCEEEEEECTT-SSEE
T ss_pred ---cCCCCEEEEEeCCCeEEEEeCC----------------------------CCeeeeccCCCccEEEEEECCC-CCEE
Confidence 7899999999999999999943 1222344579999999999999 5699
Q ss_pred EEEecCCcEEEEECCCCeeeEEeccCCCC---------------eEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLEHHTDK---------------VQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~---------------v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
++++.|+.|++||+.+++.+..+..+... +.++.|++++ .+++++.+|.|++||+++......
T Consensus 165 ~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~~~~~~ 242 (425)
T 1r5m_A 165 ISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEKTPTGK 242 (425)
T ss_dssp EEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCSSCSEE
T ss_pred EEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCCceeee
Confidence 99999999999999999999999887777 9999999976 689999999999999998877766
Q ss_pred eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
...+...|.+++|+|++. ++++++.+|.|++||+++. ..+..+..|...|.+++|+|++ +|++++.|+
T Consensus 243 ~~~~~~~i~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~ 310 (425)
T 1r5m_A 243 LIGHHGPISVLEFNDTNK-LLLSASDDGTLRIWHGGNG---------NSQNCFYGHSQSIVSASWVGDD--KVISCSMDG 310 (425)
T ss_dssp ECCCSSCEEEEEEETTTT-EEEEEETTSCEEEECSSSB---------SCSEEECCCSSCEEEEEEETTT--EEEEEETTS
T ss_pred eccCCCceEEEEECCCCC-EEEEEcCCCEEEEEECCCC---------ccceEecCCCccEEEEEECCCC--EEEEEeCCC
Confidence 667889999999999876 8999999999999999986 6778888999999999999976 999999999
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
.|++||+.+++ .+..+..|...|.+++|+|++. +|++++.+|.|++|++.++.
T Consensus 311 ~i~i~d~~~~~--~~~~~~~~~~~i~~~~~s~~~~-~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 311 SVRLWSLKQNT--LLALSIVDGVPIFAGRISQDGQ-KYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp EEEEEETTTTE--EEEEEECTTCCEEEEEECTTSS-EEEEEETTSCEEEEECHHHH
T ss_pred cEEEEECCCCc--EeEecccCCccEEEEEEcCCCC-EEEEEECCCeEEEEECCCCc
Confidence 99999999887 5666778889999999999999 58999999999999998877
No 34
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=7.6e-36 Score=295.86 Aligned_cols=293 Identities=14% Similarity=0.186 Sum_probs=232.5
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCC----CceeeeeccccCCCcceeeeecCCCCCCCC---
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGD----PNLYVHHHIIIPAFPLCMAWLDCPLKDREK--- 208 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~--- 208 (502)
..|...|.+++|+| ++|++|+.++ .+.||.+....... ...+..| .....|+.| +|+
T Consensus 13 ~~h~~~i~~~~~~~--~~l~s~~~dg---~i~iw~~~~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~ 76 (397)
T 1sq9_A 13 KAHDADIFSVSACN--SFTVSCSGDG---YLKVWDNKLLDNENPKDKSYSHFVH----KSGLHHVDV-------LQAIER 76 (397)
T ss_dssp SCSSSCEEEEEECS--SEEEEEETTS---EEEEEESBCCTTCCGGGGEEEEECC----TTCEEEEEE-------EEEEET
T ss_pred hhhhcCeEEEEecC--CeEEEEcCCC---EEEEEECCCcccccCCCcceEEecC----CCcEEEEEE-------eccccc
Confidence 35889999999999 8999999887 55666665443100 0111122 233467877 567
Q ss_pred -C---CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCc-----ccceeeEEec----
Q 010769 209 -G---NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH-----TDSVLGLAWN---- 275 (502)
Q Consensus 209 -~---~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h-----~~~V~~l~~~---- 275 (502)
+ ++|++|+.||.|++|++....... ......+..| ...|.+++|+
T Consensus 77 ~g~~~~~l~s~~~dg~i~iw~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 134 (397)
T 1sq9_A 77 DAFELCLVATTSFSGDLLFYRITREDETK----------------------KVIFEKLDLLDSDMKKHSFWALKWGASND 134 (397)
T ss_dssp TTEEEEEEEEEETTSCEEEEEEEECTTTC----------------------CEEEEEECCSCTTGGGSCEEEEEEECCC-
T ss_pred CCccccEEEEEcCCCCEEEEEccCCcccc----------------------cccceeecccccccCCCcEEEEEEeeccC
Confidence 8 999999999999999987533210 1112334456 5899999999
Q ss_pred CCCCcE-EEEEecCCcEEEEECCC------CeeeE-----Ee-------ccCCCCeEEEEEcCCCCcEEEEEECCCcEEE
Q 010769 276 KEFRNI-LASASADKQVKIWDVAA------GKCNL-----TL-------EHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 276 ~~~~~~-l~sgs~Dg~v~vwd~~~------~~~~~-----~~-------~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 336 (502)
|+ +.+ |++|+.||.|++||+.+ ++.+. .+ ..|...|.+++|+|++ +|++++.||.|++
T Consensus 135 ~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i 211 (397)
T 1sq9_A 135 RL-LSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQI 211 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEE
T ss_pred CC-CceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEE
Confidence 88 557 99999999999999998 66665 66 4489999999999988 8999999999999
Q ss_pred EeCCCCCCccceEe---e---cCCeEEEEeCCCCCCEEEEEeCC---CeEEEEECCCCCCCCCCCCCCccEEEec-----
Q 010769 337 KDARISTHSGFKWA---V---AADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHA----- 402 (502)
Q Consensus 337 wd~~~~~~~~~~~~---~---~~~v~~v~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~----- 402 (502)
||+++.+....... | ...+.+++|+|++. +|++++.+ |.|++||+++. .++..+..
T Consensus 212 ~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~-~l~~~~~d~~~g~i~i~d~~~~---------~~~~~~~~~~~~~ 281 (397)
T 1sq9_A 212 SELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGS-LLAIAHDSNSFGCITLYETEFG---------ERIGSLSVPTHSS 281 (397)
T ss_dssp EETTTTEEEEEEECCC---CCCCCEEEEEECSSTT-EEEEEEEETTEEEEEEEETTTC---------CEEEEECBC----
T ss_pred EECCCCceeEEEeccccccccCCccceEEECCCCC-EEEEEecCCCCceEEEEECCCC---------cccceeccCcccc
Confidence 99998776665555 6 88999999999865 89999999 99999999986 67778887
Q ss_pred --------CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec------CC---------------CCCEE
Q 010769 403 --------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN------PK---------------AGAVF 453 (502)
Q Consensus 403 --------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~------~~---------------~~~v~ 453 (502)
|...|.+++|+|++ .+|++++.||.|++||+.+++. +..+. .| ...|+
T Consensus 282 ~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~ 358 (397)
T 1sq9_A 282 QASLGEFAHSSWVMSLSFNDSG-ETLCSAGWDGKLRFWDVKTKER--ITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVF 358 (397)
T ss_dssp ----CCBSBSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTEE--EEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEE
T ss_pred cccccccccCCcEEEEEECCCC-CEEEEEeCCCeEEEEEcCCCce--eEEEecccCcccchhhhhccccccccccCCcee
Confidence 99999999999998 8999999999999999998874 45555 66 89999
Q ss_pred EEEEcCCC----------CcEEEEEeCCCcEEEEECCCCc
Q 010769 454 SVAFSEDS----------PFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 454 ~~~~spd~----------~~llasg~~dg~i~vwd~~~~~ 483 (502)
+++|+|++ . +|++|+.||.|++|++.+++
T Consensus 359 ~~~~~~~g~~~~~~~~~~~-~l~s~~~dg~i~iw~~~~g~ 397 (397)
T 1sq9_A 359 DVKFLKKGWRSGMGADLNE-SLCCVCLDRSIRWFREAGGK 397 (397)
T ss_dssp EEEEECTTTSBSTTCTTSC-EEEEEETTTEEEEEEEEC--
T ss_pred EEEeccccccccccccccc-eEEEecCCCcEEEEEcCCCC
Confidence 99999998 5 69999999999999998763
No 35
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.9e-35 Score=291.86 Aligned_cols=289 Identities=13% Similarity=0.143 Sum_probs=219.3
Q ss_pred CCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCC-CCCEEEE
Q 010769 137 EDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAV 214 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~-~~~~la~ 214 (502)
.|...|.+++|+|++ ++|++|+.++ .+.||.+..... ..... .........++.| +| ++++|++
T Consensus 71 ~h~~~v~~~~~~~~~~~~l~s~~~dg---~i~iwd~~~~~~--~~~~~--~~~h~~~v~~~~~-------~~~~~~~l~s 136 (383)
T 3ei3_B 71 PFDRRVTSLEWHPTHPTTVAVGSKGG---DIILWDYDVQNK--TSFIQ--GMGPGDAITGMKF-------NQFNTNQLFV 136 (383)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEEBTS---CEEEEETTSTTC--EEEEC--CCSTTCBEEEEEE-------ETTEEEEEEE
T ss_pred CCCCCEEEEEECCCCCCEEEEEcCCC---eEEEEeCCCccc--ceeee--cCCcCCceeEEEe-------CCCCCCEEEE
Confidence 478899999999999 9999999887 456666654332 11111 0011233367887 57 6899999
Q ss_pred ecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
|+.|+.|++||+.. ... .......+|...|.+++|+|+ +.+|++|+.|+.|++|
T Consensus 137 ~~~d~~i~iwd~~~-~~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~i~ 190 (383)
T 3ei3_B 137 SSIRGATTLRDFSG-SVI------------------------QVFAKTDSWDYWYCCVDVSVS-RQMLATGDSTGRLLLL 190 (383)
T ss_dssp EETTTEEEEEETTS-CEE------------------------EEEECCCCSSCCEEEEEEETT-TTEEEEEETTSEEEEE
T ss_pred EeCCCEEEEEECCC-Cce------------------------EEEeccCCCCCCeEEEEECCC-CCEEEEECCCCCEEEE
Confidence 99999999999973 111 111122356788999999999 5699999999999999
Q ss_pred ECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC---ccceEeecCCeEEEEeCC-CCCCEEEE
Q 010769 295 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SGFKWAVAADVESLAWDP-HAEHSFVV 370 (502)
Q Consensus 295 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~~~~~~~~~~v~~v~~~p-~~~~~l~~ 370 (502)
|+ +++++..+..|...|.+++|+|++..+|++++.|+.|++||+++... ......+...|.+++|+| ++. +|++
T Consensus 191 d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~l~~ 268 (383)
T 3ei3_B 191 GL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDST-KLLT 268 (383)
T ss_dssp ET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSC-EEEE
T ss_pred EC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCC-EEEE
Confidence 99 57888899999999999999999944999999999999999998432 222347889999999999 765 8999
Q ss_pred EeCCCeEEEEECCCCCCCCCCCCCCccEEEecC-------C----------CCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 371 SLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------D----------KAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 371 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h-------~----------~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
++.||.|++||+++.. ....+..| . ..+..++|+|++ .+ +++.|+.|++||
T Consensus 269 ~~~d~~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg-~~--s~s~d~~i~iwd 336 (383)
T 3ei3_B 269 TDQRNEIRVYSSYDWS---------KPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD-QL--LLNDKRTIDIYD 336 (383)
T ss_dssp EESSSEEEEEETTBTT---------SCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT-TT--CTTCCCCEEEEE
T ss_pred EcCCCcEEEEECCCCc---------cccccccccccccccccceEEeccCCCCceEEEecCCc-cc--ccCCCCeEEEEe
Confidence 9999999999999863 33333333 2 334446666666 33 778999999999
Q ss_pred CCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 434 LSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+.+++.........|.+.+.+++|+|+++ +|++|+ ||.|+||++.+
T Consensus 337 ~~~~~~~~~l~~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 337 ANSGGLVHQLRDPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp TTTCCEEEEECBTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred cCCCceeeeecCCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 99988533333333567788889999999 488886 89999999875
No 36
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1.1e-34 Score=280.92 Aligned_cols=295 Identities=18% Similarity=0.282 Sum_probs=229.8
Q ss_pred CCCccccccccccCC-CceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEE
Q 010769 136 DEDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~ 214 (502)
..|.+.|++++|+|+ +++||+|+.++ +++||.+....... ......-......+.++.| +|++++|++
T Consensus 35 ~GH~~~V~~v~~sp~~~~~l~S~s~D~---~i~vWd~~~~~~~~-~~~~~~l~~h~~~V~~~~~-------s~dg~~l~s 103 (340)
T 4aow_A 35 KGHNGWVTQIATTPQFPDMILSASRDK---TIIMWKLTRDETNY-GIPQRALRGHSHFVSDVVI-------SSDGQFALS 103 (340)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTS---CEEEEEECCSSSCS-EEEEEEECCCSSCEEEEEE-------CTTSSEEEE
T ss_pred CCccCCEEEEEEeCCCCCEEEEEcCCC---eEEEEECCCCCccc-ceeeEEEeCCCCCEEEEEE-------CCCCCEEEE
Confidence 359999999999998 68999999887 67889887654311 0111100011233467777 799999999
Q ss_pred ecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
|+.|+.|++|+..... .......+...+..+.+++. ..+|++|+.|+.+++|
T Consensus 104 ~~~d~~i~~~~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~-~~~l~s~s~d~~~~~~ 155 (340)
T 4aow_A 104 GSWDGTLRLWDLTTGT---------------------------TTRRFVGHTKDVLSVAFSSD-NRQIVSGSRDKTIKLW 155 (340)
T ss_dssp EETTSEEEEEETTTTE---------------------------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCEEEE
T ss_pred EcccccceEEeecccc---------------------------eeeeecCCCCceeEEEEeec-CccceeecCCCeEEEE
Confidence 9999999999986422 12223357778889999998 5689999999999999
Q ss_pred ECCCCee-eEEeccCCCCeEEEEEcCCCC-cEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEe
Q 010769 295 DVAAGKC-NLTLEHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSL 372 (502)
Q Consensus 295 d~~~~~~-~~~~~~h~~~v~~l~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~ 372 (502)
|+..... ...+.+|...+.+++|++.+. .++++++.|+.|++||+++.........|...|.+++|+|++. +|++|+
T Consensus 156 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s 234 (340)
T 4aow_A 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGS-LCASGG 234 (340)
T ss_dssp CTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEE
T ss_pred EeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCC-EEEEEe
Confidence 9876654 444578999999999998753 4678999999999999999887776677889999999999875 899999
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeE-------EEEe
Q 010769 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSC-------IASR 445 (502)
Q Consensus 373 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~-------~~~~ 445 (502)
.||.|++||+++. .++..+. +...|.+++|+|++ .+++++.|+.|++||++...... ....
T Consensus 235 ~Dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~~~~~--~~~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 302 (340)
T 4aow_A 235 KDGQAMLWDLNEG---------KHLYTLD-GGDIINALCFSPNR--YWLCAATGPSIKIWDLEGKIIVDELKQEVISTSS 302 (340)
T ss_dssp TTCEEEEEETTTT---------EEEEEEE-CSSCEEEEEECSSS--SEEEEEETTEEEEEETTTTEEEEEECCC------
T ss_pred CCCeEEEEEeccC---------ceeeeec-CCceEEeeecCCCC--ceeeccCCCEEEEEECCCCeEEEeccccceeeec
Confidence 9999999999976 5666665 45689999999975 45566779999999998765321 1223
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 446 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
..|...|++++|+|++++ |++|+.||.|+|||+.+|.
T Consensus 303 ~~h~~~v~~l~~s~dg~~-l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 303 KAEPPQCTSLAWSADGQT-LFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -CCCCCEEEEEECTTSSE-EEEEETTSCEEEEEEEC--
T ss_pred cCCCCCEEEEEECCCCCE-EEEEeCCCEEEEEeCCCcC
Confidence 468889999999999994 8999999999999999886
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=5.8e-35 Score=304.24 Aligned_cols=291 Identities=23% Similarity=0.346 Sum_probs=238.2
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.++.|+|++++|++++.++ .+++|. ........+..|. ....++++ +|++++|+++
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~---~i~~w~--~~~~~~~~~~~h~-----~~v~~~~~-------~~~~~~l~t~ 321 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDK---TVKLWN--RNGQLLQTLTGHS-----SSVWGVAF-------SPDGQTIASA 321 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEE--TTSCEEEEECCCS-----SCEEEEEE-------CTTSSEEEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCC---EEEEEe--CCCcEEEEEecCC-----CCeEEEEE-------CCCCCEEEEE
Confidence 34778899999999999999999887 455554 3322011111222 22355555 7999999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.|+.|++|++... ....+.+|...|.+++|+|+ +.+|++|+.|++|++|+
T Consensus 322 ~~d~~i~~w~~~~~----------------------------~~~~~~~~~~~v~~~~~s~~-g~~l~~~~~dg~v~~~~ 372 (577)
T 2ymu_A 322 SDDKTVKLWNRNGQ----------------------------HLQTLTGHSSSVWGVAFSPD-GQTIASASDDKTVKLWN 372 (577)
T ss_dssp ETTSCEEEEETTSC----------------------------EEEEECCCSSCEEEEEECTT-SSEEEEEETTSEEEEEE
T ss_pred eCCCeEEEEeCCCC----------------------------eeEEEeCCCCCEEEEEECCC-CCEEEEEeCCCEEEEEc
Confidence 99999999998631 11234578999999999999 56999999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
. +++.+..+.+|...|.+++|+|++ .+|++++.|+.|++||.. .+.......|...|.+++|+|++. ++++++.|+
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg-~~l~~~~~d~~v~~~~~~-~~~~~~~~~~~~~v~~~~~s~d~~-~l~~~~~d~ 448 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDDQ-TIASASDDK 448 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTS-SCEEEEETTSEEEEECTT-CCEEEEEECCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCC-CEEEEEeCCCEEEEEeCC-CCEEEEecCCCCCeEEEEECCCCC-EEEEEcCCC
Confidence 5 578888899999999999999999 889999999999999964 444445667889999999999875 899999999
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEE
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||.. ...+..+.+|...|++++|+|++ .+|++++.|+.|++||.. ++ ++..+.+|...|+++
T Consensus 449 ~v~~w~~~----------~~~~~~~~~~~~~v~~~~~spd~-~~las~~~d~~i~iw~~~-~~--~~~~~~~h~~~v~~l 514 (577)
T 2ymu_A 449 TVKLWNRN----------GQLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRN-GQ--LLQTLTGHSSSVRGV 514 (577)
T ss_dssp EEEEEETT----------SCEEEEEECCSSCEEEEEECTTS-CEEEEEETTSEEEEEETT-SC--EEEEEECCSSCEEEE
T ss_pred EEEEEECC----------CCEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEcCC-CC--EEEEEeCCCCCEEEE
Confidence 99999964 26678889999999999999998 999999999999999964 44 567788899999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 456 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 456 ~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+|+|++++ |++++.||.|+|||. +++++..+.+|.
T Consensus 515 ~~s~dg~~-l~s~~~dg~v~lwd~-~~~~~~~~~~h~ 549 (577)
T 2ymu_A 515 AFSPDGQT-IASASDDKTVKLWNR-NGQLLQTLTGHS 549 (577)
T ss_dssp EECTTSSC-EEEEETTSEEEEECT-TSCEEEEEECCS
T ss_pred EEcCCCCE-EEEEECcCEEEEEeC-CCCEEEEEcCCC
Confidence 99999995 899999999999996 667776665553
No 38
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=7e-36 Score=293.16 Aligned_cols=294 Identities=14% Similarity=0.139 Sum_probs=230.7
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+|++++|++|+.++ .+.+|............+..| .....++.| +|++++|++|+.
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~d~---~v~i~~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~~~~~ 72 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPNNH---EVHIYEKSGNKWVQVHELKEH----NGQVTGVDW-------APDSNRIVTCGT 72 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECSSS---EEEEEEEETTEEEEEEEEECC----SSCEEEEEE-------ETTTTEEEEEET
T ss_pred cCCCeEEEEECCCCCEEEEEeCCC---EEEEEeCCCCcEEeeeeecCC----CCcccEEEE-------eCCCCEEEEEcC
Confidence 678899999999999999998776 566666654420000112222 233467777 689999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
||.|++|++..... .....+..|...|.+++|+|+ +.+|++|+.|+.|++||+.
T Consensus 73 dg~i~vwd~~~~~~-------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~v~i~d~~ 126 (372)
T 1k8k_C 73 DRNAYVWTLKGRTW-------------------------KPTLVILRINRAARCVRWAPN-EKKFAVGSGSRVISICYFE 126 (372)
T ss_dssp TSCEEEEEEETTEE-------------------------EEEEECCCCSSCEEEEEECTT-SSEEEEEETTSSEEEEEEE
T ss_pred CCeEEEEECCCCee-------------------------eeeEEeecCCCceeEEEECCC-CCEEEEEeCCCEEEEEEec
Confidence 99999999864321 112233468899999999999 5699999999999999998
Q ss_pred CCee---e-EEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCC------------------CCCCccceEeecCCe
Q 010769 298 AGKC---N-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR------------------ISTHSGFKWAVAADV 355 (502)
Q Consensus 298 ~~~~---~-~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~------------------~~~~~~~~~~~~~~v 355 (502)
.++. . .....|...|.+++|+|++ .+|++++.||.|++||++ ..........+...+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 205 (372)
T 1k8k_C 127 QENDWWVCKHIKKPIRSTVLSLDWHPNS-VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWV 205 (372)
T ss_dssp TTTTEEEEEEECTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCE
T ss_pred CCCcceeeeeeecccCCCeeEEEEcCCC-CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeE
Confidence 8762 3 3336789999999999998 899999999999999975 233333333677889
Q ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010769 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 356 ~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
.+++|+|++. ++++++.||.|++||+++. .++..+..|..+|.+++|+|++ .+|++| .|+.|++|++.
T Consensus 206 ~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~ 273 (372)
T 1k8k_C 206 HGVCFSANGS-RVAWVSHDSTVCLADADKK---------MAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYD 273 (372)
T ss_dssp EEEEECSSSS-EEEEEETTTEEEEEEGGGT---------TEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCEEEEEECCCC---------ceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEcc
Confidence 9999999875 8999999999999999986 7788889999999999999987 777777 89999999998
Q ss_pred C--CCeeEE------------------------------------EEe-cCCCCCEEEEEEc-CCC---CcEEEEEeCCC
Q 010769 436 N--NQPSCI------------------------------------ASR-NPKAGAVFSVAFS-EDS---PFVLAIGGSKG 472 (502)
Q Consensus 436 ~--~~~~~~------------------------------------~~~-~~~~~~v~~~~~s-pd~---~~llasg~~dg 472 (502)
. +...++ ..+ .+|...|++++|+ +++ . +|++|+.||
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~-~l~s~~~Dg 352 (372)
T 1k8k_C 274 SAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCS-QFCTTGMDG 352 (372)
T ss_dssp TTTTEEEECCCCCCC--------CHHHHHHHCCCCC---------CCCSSSSSSCEEEEEEEESTTTSCS-EEEEEETTS
T ss_pred CcCceEEEeeccCccccchhhhcchhhhhhhcccccccccCccccccccccccCCcceeEEecCCCccee-eEEEecCCC
Confidence 7 321110 222 4889999999976 555 6 699999999
Q ss_pred cEEEEECCCCccc
Q 010769 473 KLEIWDTLSDAGI 485 (502)
Q Consensus 473 ~i~vwd~~~~~~~ 485 (502)
.|++|++.+++.+
T Consensus 353 ~i~~W~~~~~~~~ 365 (372)
T 1k8k_C 353 GMSIWDVRSLESA 365 (372)
T ss_dssp EEEEEEHHHHHHH
T ss_pred ceEEEEecChhHh
Confidence 9999999886654
No 39
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-35 Score=303.17 Aligned_cols=311 Identities=11% Similarity=0.080 Sum_probs=226.5
Q ss_pred CccccccccccCCC---------ceEEEEEecC----------------CcceeEEEEEecCCCCCC--ceeeeeccccC
Q 010769 138 DSEDLEDMTINPND---------AVIVCARNED----------------DVSHLEVYILEESDGGDP--NLYVHHHIIIP 190 (502)
Q Consensus 138 ~~~~v~~~~~~p~~---------~~l~~~~~~~----------------~~~~l~v~~~~~~~~~~~--~l~~~~~~~~~ 190 (502)
....|.+++|+|++ ++||+|+..+ ..+.++||.++....... ....||..
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~--- 208 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFG--- 208 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCC---
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCC---
Confidence 35689999999987 7888877442 124688998876542000 00233322
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccccee
Q 010769 191 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 270 (502)
Q Consensus 191 ~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 270 (502)
.+.+++|.+. ..+++++.+||+|+.||+|+||++........... ........+.+|...|+
T Consensus 209 -~V~~v~wsp~-~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~----------------~~~~p~~~l~~h~~~v~ 270 (524)
T 2j04_B 209 -EVWDLKWHEG-CHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFK----------------MCEKPSLTLSLADSLIT 270 (524)
T ss_dssp -SEEEEEECSS-CCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEE----------------CCCSCSEEECCTTTCEE
T ss_pred -cEEEEEECCC-CCCCCCCceEEEEecCCeEEEEEcCCCccccccce----------------eecCceEEEEcCCCCEE
Confidence 2367888532 01223478999999999999999975432210000 00112234568999999
Q ss_pred eEEecCCCCcEEEEEecCCcEEEEECCCCe-eeEEeccCCCCeEEE--EEcCCCCcEEEEEECCCcEEEEeCCCCCCccc
Q 010769 271 GLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAV--AWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~-~~~~~~~h~~~v~~l--~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
+++|++. . .|++|+.||+|++||+.++. +...+.+|...|.+| .|+|++.++|++|+.|++|+|||+++.+....
T Consensus 271 sv~~s~~-~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~ 348 (524)
T 2j04_B 271 TFDFLSP-T-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT 348 (524)
T ss_dssp EEEESSS-S-EEEEEETTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE
T ss_pred EEEecCC-C-eEEEEeCCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc
Confidence 9999986 3 89999999999999999764 456688999999999 46676547899999999999999998776554
Q ss_pred eEeecC--CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 348 KWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 348 ~~~~~~--~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+.. .|.+++|+|++. .+++++.+++|++||+++. ..+..+.+|...|++++|+|++ .+|++|+.
T Consensus 349 ~~~~~~~~~v~~v~fsp~~~-~l~s~~~d~tv~lwd~~~~---------~~~~~l~gH~~~V~sva~Sp~g-~~l~Sgs~ 417 (524)
T 2j04_B 349 TVSRFRGSNLVPVVYCPQIY-SYIYSDGASSLRAVPSRAA---------FAVHPLVSRETTITAIGVSRLH-PMVLAGSA 417 (524)
T ss_dssp EEEECSCCSCCCEEEETTTT-EEEEECSSSEEEEEETTCT---------TCCEEEEECSSCEEEEECCSSC-CBCEEEET
T ss_pred cccccccCcccceEeCCCcC-eEEEeCCCCcEEEEECccc---------ccceeeecCCCceEEEEeCCCC-CeEEEEEC
Confidence 445543 488999999876 6899999999999999986 5667888999999999999998 88999999
Q ss_pred CCcEEEEECCCCC------------------------------------------eeEEEEecCCCCCEEEEEEcCCCC-
Q 010769 426 DKMVKLWDLSNNQ------------------------------------------PSCIASRNPKAGAVFSVAFSEDSP- 462 (502)
Q Consensus 426 dg~i~vwd~~~~~------------------------------------------~~~~~~~~~~~~~v~~~~~spd~~- 462 (502)
|++|++||+.... ..++..+.+|.+.|++++|+|+++
T Consensus 418 Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~ 497 (524)
T 2j04_B 418 DGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAG 497 (524)
T ss_dssp TTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTT
T ss_pred CCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCc
Confidence 9999999853210 011233456788999999999963
Q ss_pred -cEEEEEeCCCcEEEEECCCC
Q 010769 463 -FVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 463 -~llasg~~dg~i~vwd~~~~ 482 (502)
.+||+|+.+|.|+||++...
T Consensus 498 ~~~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 498 GKCYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp TTEEEEECTTSEEEEEECSCC
T ss_pred cHHHHhhccCceEEEEEcccc
Confidence 26999999999999998654
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=8.2e-35 Score=281.23 Aligned_cols=292 Identities=13% Similarity=0.150 Sum_probs=234.6
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
+...|.+++|+|+|++++++...+.. .+| .... ...............|+.| +|++++|++++
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~---~~~--~~~~----~~~~~~~~~h~~~v~~~~~-------~~~~~~l~~~~- 70 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDAL---IGP--GIPR----HARQINTLNHGEVVCAVTI-------SNPTRHVYTGG- 70 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSS---SST--TCCS----EEEEEEEECCSSCCCEEEE-------CSSSSEEEEEC-
T ss_pred cCCceeEEEECCCCCEEEeecCCCcE---ecc--ccCC----ccccceeccCCCceEEEEE-------ecCCcEEEEcC-
Confidence 45689999999999999988766521 111 1111 1111111112334477777 78999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
+|.|+||++.......+.. .....+|...|.+++|+|+ +++|++++.||.|++||+.
T Consensus 71 dg~i~iw~~~~~~~~~~~~----------------------~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~~~d~~ 127 (337)
T 1gxr_A 71 KGCVKVWDISHPGNKSPVS----------------------QLDCLNRDNYIRSCKLLPD-GCTLIVGGEASTLSIWDLA 127 (337)
T ss_dssp BSEEEEEETTSTTCCSCSE----------------------EEECSCTTSBEEEEEECTT-SSEEEEEESSSEEEEEECC
T ss_pred CCeEEEEECCCCCceeeee----------------------cccccCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEEECC
Confidence 9999999997644322211 1122368899999999999 5699999999999999999
Q ss_pred CCe--eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 298 AGK--CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 298 ~~~--~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
+++ ....+..|...|.+++|+|++ .+|++++.+|.|++||+++.+.......+...+.+++|+|++. ++++++.+|
T Consensus 128 ~~~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~l~~~~~dg 205 (337)
T 1gxr_A 128 APTPRIKAELTSSAPACYALAISPDS-KVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGT-KLWTGGLDN 205 (337)
T ss_dssp CC--EEEEEEECSSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred CCCcceeeecccCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEEECCCCC-EEEEEecCC
Confidence 887 667778899999999999998 8999999999999999998876665556888999999999865 899999999
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEE
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.|++||+++. ..+..+ .|...+.+++|+|++ .+|++++.++.|++||+.+.+ ......|...|.++
T Consensus 206 ~i~~~d~~~~---------~~~~~~-~~~~~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~---~~~~~~~~~~v~~~ 271 (337)
T 1gxr_A 206 TVRSWDLREG---------RQLQQH-DFTSQIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPD---KYQLHLHESCVLSL 271 (337)
T ss_dssp EEEEEETTTT---------EEEEEE-ECSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSSC---EEEECCCSSCEEEE
T ss_pred cEEEEECCCC---------ceEeee-cCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCC---eEEEcCCccceeEE
Confidence 9999999976 444444 478899999999998 899999999999999999886 34567888999999
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 456 AFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 456 ~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+|+|+++ +|++++.+|.|++|++.+++.+.
T Consensus 272 ~~~~~~~-~l~~~~~dg~i~~~~~~~~~~~~ 301 (337)
T 1gxr_A 272 KFAYCGK-WFVSTGKDNLLNAWRTPYGASIF 301 (337)
T ss_dssp EECTTSS-EEEEEETTSEEEEEETTTCCEEE
T ss_pred EECCCCC-EEEEecCCCcEEEEECCCCeEEE
Confidence 9999999 58899999999999999988763
No 41
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.9e-34 Score=289.44 Aligned_cols=263 Identities=19% Similarity=0.336 Sum_probs=218.1
Q ss_pred ccCCCcceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc
Q 010769 188 IIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT 266 (502)
Q Consensus 188 ~~~~~~~~~~w~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~ 266 (502)
..+..+.+++| +|+ +++||+|+.+|.|+||++....... ...........+.+|.
T Consensus 126 ~h~~~v~~l~~-------~p~~~~~lat~~~dg~V~vwd~~~~~~~~-----------------~~~~~~~~~~~~~~h~ 181 (430)
T 2xyi_A 126 NHEGEVNRARY-------MPQNACVIATKTPSSDVLVFDYTKHPSKP-----------------EPSGECQPDLRLRGHQ 181 (430)
T ss_dssp EESSCCSEEEE-------ETTEEEEEEEECSSSCEEEEEGGGSCSSC-----------------CTTCCCCCSEEEECCS
T ss_pred cCCCcEEEEEE-------CCCCCcEEEEECCCCcEEEEECCCccccc-----------------CccccCCCcEEecCCC
Confidence 34455678887 565 7899999999999999996421110 0001123344556899
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCee-------eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~-------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 339 (502)
..|++|+|+|++..+|++|+.||+|++|++.++.. ...+.+|...|.+++|+|.+..+|++++.||.|++||+
T Consensus 182 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~ 261 (430)
T 2xyi_A 182 KEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDT 261 (430)
T ss_dssp SCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEET
T ss_pred CCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEEC
Confidence 99999999999666999999999999999987422 45677899999999999966699999999999999999
Q ss_pred CCCC---CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC
Q 010769 340 RIST---HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 340 ~~~~---~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
++.. .......+...|++++|+|++..++++|+.+|.|++||+++. ..++..+..|...|++++|+|++
T Consensus 262 ~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~--------~~~~~~~~~h~~~v~~i~~sp~~ 333 (430)
T 2xyi_A 262 RNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL--------KLKLHSFESHKDEIFQVQWSPHN 333 (430)
T ss_dssp TCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT--------TSCSEEEECCSSCEEEEEECSSC
T ss_pred CCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC--------CCCeEEeecCCCCEEEEEECCCC
Confidence 9873 344345778899999999998888999999999999999986 36788899999999999999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCC------------eeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQ------------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~------------~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
+.+|++++.|+.|+|||+.... +..+..+.+|...|++++|+|+++++|++++.||.|+||++...
T Consensus 334 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 334 ETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 7789999999999999998722 24677888899999999999999978999999999999999754
No 42
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=6.9e-36 Score=294.92 Aligned_cols=250 Identities=22% Similarity=0.328 Sum_probs=210.5
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||+|+|||+.+.. ....+..|...|.+++
T Consensus 70 ~~~~~-------sp~~~~l~s~s~D~~v~iWd~~~~~---------------------------~~~~~~~h~~~v~~~~ 115 (380)
T 3iz6_a 70 YSLDW-------TPEKNWIVSASQDGRLIVWNALTSQ---------------------------KTHAIKLHCPWVMECA 115 (380)
T ss_dssp EEEEE-------CTTSSCEEEEETTSEEEEEETTTTE---------------------------EEEEEECCCTTCCCCE
T ss_pred EEEEE-------cCCCCEEEEEeCCCeEEEEECCCCc---------------------------cceEEecCCCCEEEEE
Confidence 68888 7999999999999999999986532 2234457999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCe-------eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGK-------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~-------~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
|+|+ +.+|++|+.|+.|++|++.+.. ....+.+|...|.++.|+|.+...|++|+.|++|++||++++....
T Consensus 116 ~s~~-g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~ 194 (380)
T 3iz6_a 116 FAPN-GQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRIS 194 (380)
T ss_dssp ECTT-SSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEE
T ss_pred ECCC-CCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEE
Confidence 9999 5699999999999999987532 3456789999999999999876789999999999999999887654
Q ss_pred ce-----EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEE
Q 010769 347 FK-----WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 347 ~~-----~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
.. ..|...|.+++|++.+..+|++|+.||.|++||++.. ...+..+.+|...|++++|+|++ .+|+
T Consensus 195 ~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~--------~~~~~~~~~h~~~v~~v~~~p~~-~~l~ 265 (380)
T 3iz6_a 195 IFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRIT--------SRAVRTYHGHEGDINSVKFFPDG-QRFG 265 (380)
T ss_dssp EECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTT--------CCCCEEECCCSSCCCEEEECTTS-SEEE
T ss_pred EeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCC--------CcceEEECCcCCCeEEEEEecCC-CeEE
Confidence 33 3567889999998866679999999999999999865 36788899999999999999998 8999
Q ss_pred EEeCCCcEEEEECCCCCeeEEEEecC-----CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 422 TGSTDKMVKLWDLSNNQPSCIASRNP-----KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 422 t~s~dg~i~vwd~~~~~~~~~~~~~~-----~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+|+.|++|++||+++++......... +...|++++|+|+++ +|++|+.||.|++||+.+++.+...
T Consensus 266 s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~g~~dg~i~vwd~~~~~~~~~~ 336 (380)
T 3iz6_a 266 TGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGR-LLFAGYSNGDCYVWDTLLAEMVLNL 336 (380)
T ss_dssp EECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSS-EEEEECTTSCEEEEETTTCCEEEEE
T ss_pred EEcCCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCC-EEEEEECCCCEEEEECCCCceEEEE
Confidence 99999999999999987433332211 223489999999999 5889999999999999988876554
No 43
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1e-34 Score=284.03 Aligned_cols=289 Identities=13% Similarity=0.168 Sum_probs=233.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.+++|+|++++|++|+.++ .+.||.+.... ....+..|. ....++.| +|++++|++++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~dg---~i~vwd~~~~~--~~~~~~~h~----~~v~~~~~-------~~~~~~l~s~~ 93 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSKDS---SASVWYSLNGE--RLGTLDGHT----GTIWSIDV-------DCFTKYCVTGS 93 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEESSS---CEEEEETTTCC--EEEEECCCS----SCEEEEEE-------CTTSSEEEEEE
T ss_pred EeeceEEEEEEcCCCCEEEEEeCCC---EEEEEeCCCch--hhhhhhhcC----CcEEEEEE-------cCCCCEEEEEe
Confidence 4888999999999999999999887 44555543322 111122222 23367777 78999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC-----CcE
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD-----KQV 291 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D-----g~v 291 (502)
.||.|++|++....... .+ .|...|.+++|+|+ +.+|++++.+ +.|
T Consensus 94 ~dg~i~iwd~~~~~~~~---------------------------~~-~~~~~v~~~~~~~~-~~~l~~~~~~~~~~~g~i 144 (369)
T 3zwl_B 94 ADYSIKLWDVSNGQCVA---------------------------TW-KSPVPVKRVEFSPC-GNYFLAILDNVMKNPGSI 144 (369)
T ss_dssp TTTEEEEEETTTCCEEE---------------------------EE-ECSSCEEEEEECTT-SSEEEEEECCBTTBCCEE
T ss_pred CCCeEEEEECCCCcEEE---------------------------Ee-ecCCCeEEEEEccC-CCEEEEecCCccCCCCEE
Confidence 99999999997533211 12 27788999999999 5689999998 999
Q ss_pred EEEECCCCe-----------eeEEeccCCC--CeEEEEEcCCCCcEEEEEECCCcEEEEeCCC-CCCccceEeecCCeEE
Q 010769 292 KIWDVAAGK-----------CNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAVAADVES 357 (502)
Q Consensus 292 ~vwd~~~~~-----------~~~~~~~h~~--~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~~~~v~~ 357 (502)
++||+..+. .+..+..|.. .+.+++|+|++ .+|++++.+|.|++||+++ .........+...|.+
T Consensus 145 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~ 223 (369)
T 3zwl_B 145 NIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISD 223 (369)
T ss_dssp EEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEE
T ss_pred EEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeE
Confidence 999997653 3344555666 99999999998 8999999999999999998 4545545567889999
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC----------
Q 010769 358 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---------- 427 (502)
Q Consensus 358 v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---------- 427 (502)
++|+|++. +|++++.+|.|++||+++. ..+..+. +...+.+++|+|++ .++++++.++
T Consensus 224 ~~~~~~~~-~l~~~~~d~~i~v~d~~~~---------~~~~~~~-~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 224 MQFSPDLT-YFITSSRDTNSFLVDVSTL---------QVLKKYE-TDCPLNTAVITPLK-EFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp EEECTTSS-EEEEEETTSEEEEEETTTC---------CEEEEEE-CSSCEEEEEECSSS-SEEEEEECCC----------
T ss_pred EEECCCCC-EEEEecCCceEEEEECCCC---------ceeeeec-CCCCceeEEecCCC-ceEEEeecCCCceEEEEecC
Confidence 99999865 8999999999999999986 5555555 78899999999998 8899988888
Q ss_pred ----cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 428 ----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 428 ----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
.+++||+.+++ .+..+..|.+.|++++|+|+++ +|++++.||.|+||++.++....
T Consensus 292 ~~~~~i~~~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~ 351 (369)
T 3zwl_B 292 EGKFEARFYHKIFEE--EIGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSYFDF 351 (369)
T ss_dssp ---CEEEEEETTTCC--EEEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHHHTC
T ss_pred CCcceeEEEecCCCc--chhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECccccchh
Confidence 89999999987 5667788999999999999999 59999999999999998766543
No 44
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=2.7e-34 Score=284.80 Aligned_cols=271 Identities=20% Similarity=0.325 Sum_probs=211.5
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccccee
Q 010769 191 AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 270 (502)
Q Consensus 191 ~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 270 (502)
....|++| +|+|++||+|+ ++.++||++..+..+.. +...... ..............+...|.
T Consensus 65 ~~V~~v~f-------spdg~~la~g~-~~~v~i~~~~~g~~~~~---l~~~~~~------~~~~~~~~~~~~~~~~~~v~ 127 (393)
T 1erj_A 65 SVVCCVKF-------SNDGEYLATGC-NKTTQVYRVSDGSLVAR---LSDDSAA------NKDPENLNTSSSPSSDLYIR 127 (393)
T ss_dssp SCCCEEEE-------CTTSSEEEEEC-BSCEEEEETTTCCEEEE---ECC-----------------------CCCCBEE
T ss_pred CEEEEEEE-------CCCCCEEEEEc-CCcEEEEEecCCCEEEE---ecCcccc------ccccccccccccCCCceeEE
Confidence 34478877 89999999987 68999999976543321 1110000 00000000111123445699
Q ss_pred eEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe
Q 010769 271 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 350 (502)
+++|+|+ +.+|++|+.|++|+|||+.+++.+..+.+|...|.+++|+|++ .+|++++.|++|++||++++.... ...
T Consensus 128 ~v~~s~d-g~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~s~s~d~~v~iwd~~~~~~~~-~~~ 204 (393)
T 1erj_A 128 SVCFSPD-GKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSG-DKLVSGSGDRTVRIWDLRTGQCSL-TLS 204 (393)
T ss_dssp EEEECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEE-EEE
T ss_pred EEEECCC-CCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCC-CEEEEecCCCcEEEEECCCCeeEE-EEE
Confidence 9999999 5699999999999999999999999999999999999999999 899999999999999999876544 445
Q ss_pred ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-------ecCCCCeeEEEEcCCCCCEEEEE
Q 010769 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-------HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 351 ~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-------~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
+...+.+++|+|....++++|+.||.|++||++++ ..+..+ .+|...|.+++|+|++ .+|++|
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~---------~~~~~~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~ 274 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETG---------FLVERLDSENESGTGHKDSVYSVVFTRDG-QSVVSG 274 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTC---------CEEEEEC------CCCSSCEEEEEECTTS-SEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCC---------cEEEeecccccCCCCCCCCEEEEEECCCC-CEEEEE
Confidence 67789999999955569999999999999999876 334333 5799999999999998 899999
Q ss_pred eCCCcEEEEECCCCC----------eeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 424 STDKMVKLWDLSNNQ----------PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 424 s~dg~i~vwd~~~~~----------~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+.|+.|++||+++.. ..+...+.+|...|.+++|+|++.+ |++|+.||.|++||+.+++.+..+.+|.
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-l~sgs~D~~v~iwd~~~~~~~~~l~~h~ 352 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEY-ILSGSKDRGVLFWDKKSGNPLLMLQGHR 352 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCE-EEEEETTSEEEEEETTTCCEEEEEECCS
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCE-EEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 999999999997642 1245567789999999999999995 8999999999999999998876655543
No 45
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=1.5e-35 Score=297.88 Aligned_cols=290 Identities=14% Similarity=0.202 Sum_probs=214.1
Q ss_pred CCccccccccccCC-CceEEEEEecCCcceeEEEEEecCCCCCCcee--eeeccccCCCcceeeeecCCCCCCC-CCCEE
Q 010769 137 EDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESDGGDPNLY--VHHHIIIPAFPLCMAWLDCPLKDRE-KGNFM 212 (502)
Q Consensus 137 ~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~w~~~~~~~s~-~~~~l 212 (502)
.|+..|++|+|+|+ +++||+|+.++ .+.||.+..... ..+. ..|. ....|++| +| ++++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg---~i~lWd~~~~~~--~~~~~~~gH~----~~V~~l~f-------~p~~~~~l 180 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGG---DIMLWNFGIKDK--PTFIKGIGAG----GSITGLKF-------NPLNTNQF 180 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTS---CEEEECSSCCSC--CEEECCCSSS----CCCCEEEE-------CSSCTTEE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCC---EEEEEECCCCCc--eeEEEccCCC----CCEEEEEE-------eCCCCCEE
Confidence 46778999999995 57899999887 567776654432 1111 1122 23378888 55 68999
Q ss_pred EEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEE
Q 010769 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~ 292 (502)
++|+.||+|+|||+..... ........+...+.+++|+|+ +.+|++|+.||+|+
T Consensus 181 ~s~s~D~~v~iwd~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~-~~~l~~g~~dg~i~ 234 (435)
T 4e54_B 181 YASSMEGTTRLQDFKGNIL-------------------------RVFASSDTINIWFCSLDVSAS-SRMVVTGDNVGNVI 234 (435)
T ss_dssp EEECSSSCEEEEETTSCEE-------------------------EEEECCSSCSCCCCCEEEETT-TTEEEEECSSSBEE
T ss_pred EEEeCCCEEEEeeccCCce-------------------------eEEeccCCCCccEEEEEECCC-CCEEEEEeCCCcEe
Confidence 9999999999999864210 111112245567899999999 56999999999999
Q ss_pred EEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc---ceEeecCCeEEEEeCCCCCCEEE
Q 010769 293 IWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG---FKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 293 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~---~~~~~~~~v~~v~~~p~~~~~l~ 369 (502)
+||+. ++.+..+.+|...|++++|+|++..+|++|+.|+.|++||+++..... ....|...|.+++|+|++. +|+
T Consensus 235 ~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~-~l~ 312 (435)
T 4e54_B 235 LLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGA-RLL 312 (435)
T ss_dssp EEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSS-EEE
T ss_pred eeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCC-eeE
Confidence 99986 566778899999999999999997789999999999999998766433 2346788999999999876 899
Q ss_pred EEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC------CeeEEEEcCCCCCEEEEEe------------CCCcEEE
Q 010769 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------AVCTISYNPLVPNLLATGS------------TDKMVKL 431 (502)
Q Consensus 370 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~------~v~~l~~sp~~~~~l~t~s------------~dg~i~v 431 (502)
+++.||.|++||+++. .....+..|.. .+..+.|+|.+ .++++++ .++.|++
T Consensus 313 s~~~D~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~i~i 382 (435)
T 4e54_B 313 TTDQKSEIRVYSASQW---------DCPLGLIPHPHRHFQHLTPIKAAWHPRY-NLIVVGRYPDPNFKSCTPYELRTIDV 382 (435)
T ss_dssp EEESSSCEEEEESSSS---------SSEEEECCCCCCCCSSSCCCBCEECSSS-SCEEEECCCCTTSCCSSTTCCCCEEE
T ss_pred EEcCCCEEEEEECCCC---------ccceEEecccccccccceeEEEEEcCCC-CEEEEEEcCCCCeEEEEecCCCEEEE
Confidence 9999999999999986 33444443332 23344566655 4444433 3467999
Q ss_pred EECCCCCeeEEEE-ecCCCCCEEEE-EEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 432 WDLSNNQPSCIAS-RNPKAGAVFSV-AFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 432 wd~~~~~~~~~~~-~~~~~~~v~~~-~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
||..+++. +.. ..+|...|.++ +|+|+|.+ |++|+ |+.|+||++.+++.
T Consensus 383 wd~~~g~~--~~~l~~~~~~~v~s~~~fspdg~~-lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 383 FDGNSGKM--MCQLYDPESSGISSLNEFNPMGDT-LASAM-GYHILIWSQQEART 433 (435)
T ss_dssp ECSSSCCE--EEEECCSSCCCCCCEEEECTTSSC-EEEEC-SSEEEECCCC----
T ss_pred EECCCCcE--EEEEeCCCCCcEEEEEEECCCCCE-EEEEc-CCcEEEEECCcCee
Confidence 99999874 333 35677888887 69999994 77765 88999999988764
No 46
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.5e-34 Score=308.01 Aligned_cols=286 Identities=20% Similarity=0.320 Sum_probs=223.8
Q ss_pred CCccccccccccCCC-ceEEEEEecCCcceeEEEEEecCCCCC----CceeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010769 137 EDSEDLEDMTINPND-AVIVCARNEDDVSHLEVYILEESDGGD----PNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~-~~l~~~~~~~~~~~l~v~~~~~~~~~~----~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~ 211 (502)
.|.+.|.+++|+|++ ++|++|+.++ .++||.+....... ..+..|. ....|+.| +|++++
T Consensus 380 ~H~~~V~~v~~~~~~~~~l~s~s~D~---~i~~W~~~~~~~~~~~~~~~~~~h~-----~~v~~v~~-------s~~g~~ 444 (694)
T 3dm0_A 380 AHTDMVTAIATPIDNADIIVSASRDK---SIILWKLTKDDKAYGVAQRRLTGHS-----HFVEDVVL-------SSDGQF 444 (694)
T ss_dssp CCSSCEEEEECCTTCCSEEEEEETTS---EEEEEECCCSTTCSCEEEEEEECCS-----SCEEEEEE-------CTTSSE
T ss_pred cCCceeEEEEecCCCCCEEEEEeCCC---cEEEEEccCCCcccccccceecCCC-----CcEEEEEE-------CCCCCE
Confidence 489999999999975 6888998887 67777766443210 0122222 23357766 789999
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
|++|+.||.|+|||+.... ....+.+|...|++++|+|+ +.+|+||+.|++|
T Consensus 445 l~sgs~Dg~v~vwd~~~~~---------------------------~~~~~~~h~~~v~~~~~s~~-~~~l~s~s~D~~i 496 (694)
T 3dm0_A 445 ALSGSWDGELRLWDLAAGV---------------------------STRRFVGHTKDVLSVAFSLD-NRQIVSASRDRTI 496 (694)
T ss_dssp EEEEETTSEEEEEETTTTE---------------------------EEEEEECCSSCEEEEEECTT-SSCEEEEETTSCE
T ss_pred EEEEeCCCcEEEEECCCCc---------------------------ceeEEeCCCCCEEEEEEeCC-CCEEEEEeCCCEE
Confidence 9999999999999997532 22345589999999999999 5689999999999
Q ss_pred EEEECCCCeeeEEe---ccCCCCeEEEEEcCCCC-cEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCE
Q 010769 292 KIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSP-QILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 292 ~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 367 (502)
++||+......... .+|...|.+++|+|++. .+|++|+.|++|++||++..+.......|.+.|.+++|+|++. +
T Consensus 497 ~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~-~ 575 (694)
T 3dm0_A 497 KLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGS-L 575 (694)
T ss_dssp EEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSS-E
T ss_pred EEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCC-E
Confidence 99998755433322 46889999999999863 5899999999999999998877766677899999999999875 8
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC
Q 010769 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP 447 (502)
Q Consensus 368 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~ 447 (502)
+++|+.||.|++||++++ ..+..+. +...|.+++|+|++ .+|++++ ++.|+|||+.++... ..+..
T Consensus 576 l~sg~~Dg~i~iwd~~~~---------~~~~~~~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~~~~--~~~~~ 641 (694)
T 3dm0_A 576 CASGGKDGVVLLWDLAEG---------KKLYSLE-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESKSIV--EDLKV 641 (694)
T ss_dssp EEEEETTSBCEEEETTTT---------EEEECCB-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTTEEE--EEECC
T ss_pred EEEEeCCCeEEEEECCCC---------ceEEEec-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCCCCh--hhhcc
Confidence 999999999999999986 4455444 45679999999987 7776665 566999999987632 22221
Q ss_pred -------------------CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 448 -------------------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 448 -------------------~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+...+++++|+|+++ +|++|+.||.|+||++..
T Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~-~l~sgs~Dg~i~iW~i~~ 693 (694)
T 3dm0_A 642 DLKAEAEKADNSGPAATKRKVIYCTSLNWSADGS-TLFSGYTDGVIRVWGIGR 693 (694)
T ss_dssp CCC----------------CCCCEEEEEECTTSS-EEEEEETTSEEEEEEC--
T ss_pred ccccccccccccccccCCceeEEeeeEEEcCCCC-EEEEEcCCCeEEEEeccC
Confidence 122478999999999 599999999999999853
No 47
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.7e-35 Score=284.44 Aligned_cols=247 Identities=23% Similarity=0.394 Sum_probs=204.8
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|+.|+||++...... .......+|...|.+++
T Consensus 20 ~~l~~-------sp~g~~las~~~D~~i~iw~~~~~~~~------------------------~~~~~~~~h~~~v~~~~ 68 (345)
T 3fm0_A 20 WFLAW-------NPAGTLLASCGGDRRIRIWGTEGDSWI------------------------CKSVLSEGHQRTVRKVA 68 (345)
T ss_dssp EEEEE-------CTTSSCEEEEETTSCEEEEEEETTEEE------------------------EEEEECSSCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEcCCCeEEEEEcCCCcce------------------------eeeeeccccCCcEEEEE
Confidence 56776 899999999999999999998642110 11112357999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCC--eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc---cce
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFK 348 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~ 348 (502)
|+|+ +.+|++|+.|++|++|++..+ +++..+.+|...|.+++|+|++ ++|++|+.|++|++||++..... ...
T Consensus 69 ~sp~-g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~~~~~~~ 146 (345)
T 3fm0_A 69 WSPC-GNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEYECVSVL 146 (345)
T ss_dssp ECTT-SSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCEEEEEEE
T ss_pred ECCC-CCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCeEEEEEe
Confidence 9999 569999999999999999876 4678899999999999999998 89999999999999999876532 223
Q ss_pred EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010769 349 WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 349 ~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
..|...|.+++|+|++. +|++++.|+.|++|+++... ..+...+.+|...|++++|+|++ .+|++|+.|++
T Consensus 147 ~~h~~~v~~~~~~p~~~-~l~s~s~d~~i~~w~~~~~~-------~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~ 217 (345)
T 3fm0_A 147 NSHTQDVKHVVWHPSQE-LLASASYDDTVKLYREEEDD-------WVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRT 217 (345)
T ss_dssp CCCCSCEEEEEECSSSS-CEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSC
T ss_pred cCcCCCeEEEEECCCCC-EEEEEeCCCcEEEEEecCCC-------EEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCe
Confidence 45778899999999876 89999999999999998652 13457788999999999999998 99999999999
Q ss_pred EEEEECCCCC-------------eeEEEEecC-CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 429 VKLWDLSNNQ-------------PSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 429 i~vwd~~~~~-------------~~~~~~~~~-~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
|+||+..... ..++..+.+ |...|++++|+|++. .|++++.|+.|++|++..+.
T Consensus 218 v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~-~l~s~~~d~~i~vw~~~~~~ 285 (345)
T 3fm0_A 218 VRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTG-ALATACGDDAIRVFQEDPNS 285 (345)
T ss_dssp EEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTC-CEEEEETTSCEEEEEECTTS
T ss_pred EEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCC-EEEEEeCCCeEEEEEeCCCC
Confidence 9999963321 123444444 888999999999999 59999999999999987654
No 48
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2e-34 Score=275.63 Aligned_cols=287 Identities=18% Similarity=0.225 Sum_probs=232.8
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++| |++++|++|+.++ .+.+|.+..... ......| .....++.| +|++++|++|
T Consensus 15 ~~h~~~v~~~~~-~~~~~l~s~~~dg---~v~vw~~~~~~~--~~~~~~~----~~~v~~~~~-------~~~~~~l~~~ 77 (313)
T 3odt_A 15 KGHDQDVRDVVA-VDDSKVASVSRDG---TVRLWSKDDQWL--GTVVYTG----QGFLNSVCY-------DSEKELLLFG 77 (313)
T ss_dssp CCCSSCEEEEEE-EETTEEEEEETTS---EEEEEEESSSEE--EEEEEEC----SSCEEEEEE-------ETTTTEEEEE
T ss_pred hCCCCCcEEEEe-cCCCEEEEEEcCC---cEEEEECCCCEE--EEEeecC----CccEEEEEE-------CCCCCEEEEe
Confidence 358899999999 9999999999887 566666643321 1222222 334467777 6899999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.+|.|++|++...... .....+.+|...|.+++|+ +.+|++|+.||.|++||
T Consensus 78 ~~dg~i~~~~~~~~~~~------------------------~~~~~~~~~~~~i~~~~~~---~~~l~~~~~d~~i~~~d 130 (313)
T 3odt_A 78 GKDTMINGVPLFATSGE------------------------DPLYTLIGHQGNVCSLSFQ---DGVVISGSWDKTAKVWK 130 (313)
T ss_dssp ETTSCEEEEETTCCTTS------------------------CC-CEECCCSSCEEEEEEE---TTEEEEEETTSEEEEEE
T ss_pred cCCCeEEEEEeeecCCC------------------------CcccchhhcccCEEEEEec---CCEEEEEeCCCCEEEEc
Confidence 99999999999753221 2233445799999999994 34899999999999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe-ecCCeEEEEeCCCCCCEEEEEeCC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~p~~~~~l~~~~~d 374 (502)
.++.+..+..|...+.++.|+|....+|++++.||.|++||... ....... +...+.+++|+|++. +++++.+
T Consensus 131 --~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~--~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~d 204 (313)
T 3odt_A 131 --EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDK--VIKTFSGIHNDVVRHLAVVDDGH--FISCSND 204 (313)
T ss_dssp --TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTE--EEEEECSSCSSCEEEEEEEETTE--EEEEETT
T ss_pred --CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCc--eEEEEeccCcccEEEEEEcCCCe--EEEccCC
Confidence 77888889999999999999984448999999999999999432 2222223 778899999999764 8999999
Q ss_pred CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEE
Q 010769 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFS 454 (502)
Q Consensus 375 g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~ 454 (502)
|.|++||+++. .++..+..|...|++++|+|++ .|++++.||.|++||+.+++ .+..+..|...|.+
T Consensus 205 g~i~i~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~--~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 205 GLIKLVDMHTG---------DVLRTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGS--LKQVITLPAISIWS 271 (313)
T ss_dssp SEEEEEETTTC---------CEEEEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCC--EEEEEECSSSCEEE
T ss_pred CeEEEEECCch---------hhhhhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCc--eeEEEeccCceEEE
Confidence 99999999986 7788889999999999999987 48899999999999999987 56666778889999
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 455 VAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 455 ~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
++|+|++. +++++.||.|++|++.+++.+..
T Consensus 272 ~~~~~~~~--~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 272 VDCMSNGD--IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp EEECTTSC--EEEEETTSCEEEEESCGGGCCC-
T ss_pred EEEccCCC--EEEEeCCCcEEEEeCCCCceeeh
Confidence 99999998 55689999999999998876654
No 49
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=6.9e-36 Score=294.25 Aligned_cols=292 Identities=11% Similarity=0.177 Sum_probs=215.4
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCC-CCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESD-GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
+...|.+++|+|++++|++|+.++ .+.||...... .....+..|. ....+++| +|++++|++|+
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~---~i~iw~~~~~~~~~~~~~~~h~-----~~v~~~~~-------s~~~~~l~s~s 74 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATN---QVELYEQDGNGWKHARTFSDHD-----KIVTCVDW-------APKSNRIVTCS 74 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSS---CBCEEEEETTEEEECCCBCCCS-----SCEEEEEE-------CTTTCCEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCC---EEEEEEccCCceEEEEEEecCC-----ceEEEEEE-------eCCCCEEEEEe
Confidence 356899999999999999998876 56888877542 1111222332 22367777 78999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.|+.|+|||+...... .....+.+|...|++++|+|+ +.+|++|+.|++|++||+
T Consensus 75 ~d~~v~vwd~~~~~~~------------------------~~~~~~~~~~~~v~~~~~~~~-~~~l~~~~~d~~i~iwd~ 129 (377)
T 3dwl_C 75 QDRNAYVYEKRPDGTW------------------------KQTLVLLRLNRAATFVRWSPN-EDKFAVGSGARVISVCYF 129 (377)
T ss_dssp TTSSEEEC------CC------------------------CCEEECCCCSSCEEEEECCTT-SSCCEEEESSSCEEECCC
T ss_pred CCCeEEEEEcCCCCce------------------------eeeeEecccCCceEEEEECCC-CCEEEEEecCCeEEEEEE
Confidence 9999999999754311 122344579999999999998 569999999999999999
Q ss_pred CCCe---eeEEecc-CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC------------------CccceEeecCC
Q 010769 297 AAGK---CNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST------------------HSGFKWAVAAD 354 (502)
Q Consensus 297 ~~~~---~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~------------------~~~~~~~~~~~ 354 (502)
.+++ +...+.. |...|.+++|+|++ .+|++++.|+.|++||++... ..... .|...
T Consensus 130 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 207 (377)
T 3dwl_C 130 EQENDWWVSKHLKRPLRSTILSLDWHPNN-VLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGW 207 (377)
T ss_dssp -----CCCCEEECSSCCSCEEEEEECTTS-SEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSS
T ss_pred CCcccceeeeEeecccCCCeEEEEEcCCC-CEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCce
Confidence 9887 4777877 99999999999998 899999999999999986322 12222 67788
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEEC
Q 010769 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDL 434 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~ 434 (502)
|.+++|+|++. ++++++.||.|++||+++.... ...+..+..|...|.+++|+|++ .+|++|+.++.+ +|+.
T Consensus 208 v~~~~~sp~~~-~l~~~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~-~~~~ 279 (377)
T 3dwl_C 208 VHAVGFSPSGN-ALAYAGHDSSVTIAYPSAPEQP-----PRALITVKLSQLPLRSLLWANES-AIVAAGYNYSPI-LLQG 279 (377)
T ss_dssp EEEEEECTTSS-CEEEEETTTEEC-CEECSTTSC-----EEECCCEECSSSCEEEEEEEETT-EEEEEESSSSEE-EECC
T ss_pred EEEEEECCCCC-EEEEEeCCCcEEEEECCCCCCc-----ceeeEeecCCCCceEEEEEcCCC-CEEEEEcCCcEE-EEEe
Confidence 99999999876 8999999999999999987210 01167788999999999999998 888888766655 7766
Q ss_pred CCCCe-------------------------------------eEEE-------------EecCCCCCEEEEEEcCCCCc-
Q 010769 435 SNNQP-------------------------------------SCIA-------------SRNPKAGAVFSVAFSEDSPF- 463 (502)
Q Consensus 435 ~~~~~-------------------------------------~~~~-------------~~~~~~~~v~~~~~spd~~~- 463 (502)
..... .... ....|.+.|+++++.+....
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~~~~ 359 (377)
T 3dwl_C 280 NESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGTPGN 359 (377)
T ss_dssp CC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEETTE
T ss_pred CCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCCCCc
Confidence 52110 0000 01238899999998765543
Q ss_pred --EEEEEeCCCcEEEEEC
Q 010769 464 --VLAIGGSKGKLEIWDT 479 (502)
Q Consensus 464 --llasg~~dg~i~vwd~ 479 (502)
.|++||.||.|+|||+
T Consensus 360 ~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 360 ITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp EEEEEEEETTSEEEEECC
T ss_pred eEEEEeecCCCcEEEecC
Confidence 5999999999999986
No 50
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.5e-34 Score=283.64 Aligned_cols=305 Identities=11% Similarity=0.109 Sum_probs=217.3
Q ss_pred ccccccccCCCceEEEEEecCC----cceeEEEEEecCCCCC-CceeeeeccccC---CCcceeeeecCCCCCCCCCCEE
Q 010769 141 DLEDMTINPNDAVIVCARNEDD----VSHLEVYILEESDGGD-PNLYVHHHIIIP---AFPLCMAWLDCPLKDREKGNFM 212 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~----~~~l~v~~~~~~~~~~-~~l~~~~~~~~~---~~~~~~~w~~~~~~~s~~~~~l 212 (502)
+|.+++|+|++++||+|+.+.. ...|++|.++...... ..+..++...+. ..+.|+.+ +++.+
T Consensus 16 PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~---------~~~~~ 86 (365)
T 4h5i_A 16 PAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDA---------SKGII 86 (365)
T ss_dssp CEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEE---------ETTEE
T ss_pred CEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEe---------CCCEE
Confidence 6999999999999999975432 1247788776554310 112222322222 12345543 45555
Q ss_pred EEe-----------cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcE
Q 010769 213 AVG-----------SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 281 (502)
Q Consensus 213 a~g-----------~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 281 (502)
++| +.++.||+|++........... .........+...+.+++|+|++. +
T Consensus 87 ~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~fSpDg~-~ 147 (365)
T 4h5i_A 87 LVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLT------------------SVDFDASTNADDYTKLVYISREGT-V 147 (365)
T ss_dssp EEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEE------------------EECSSCCCCTTCCEEEEEECTTSS-C
T ss_pred EEEECCCccEEEEecCCCcEEEEEecCCCceEEEee------------------eeceeecCCcccCEEEEEEcCCCC-E
Confidence 554 5577899998864332111000 011112234566799999999954 5
Q ss_pred EE--EEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc--eEeecCCeEE
Q 010769 282 LA--SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--KWAVAADVES 357 (502)
Q Consensus 282 l~--sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~v~~ 357 (502)
|+ +++.|++|+|||+.+++++..+. |...|.+|+|+|++ .+|++++. +.+++|+..++..... ...+...+.+
T Consensus 148 la~as~~~d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 224 (365)
T 4h5i_A 148 AAIASSKVPAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDG-KVVAYITG-SSLEVISTVTGSCIARKTDFDKNWSLSK 224 (365)
T ss_dssp EEEEESCSSCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTS-SEEEEECS-SCEEEEETTTCCEEEEECCCCTTEEEEE
T ss_pred EEEEECCCCCEEEEeECCCCcEEEEeC-CCCceEEEEEccCC-ceEEeccc-eeEEEEEeccCcceeeeecCCCCCCEEE
Confidence 54 45579999999999999998886 77889999999999 88888875 5566777666554322 2345667999
Q ss_pred EEeCCCCCCEEEEEeCCC----eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 358 LAWDPHAEHSFVVSLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 358 v~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
++|+|++. ++++++.++ .+++|++...... ......+..|..+|++++|+|++ ++||+|+.|++|+|||
T Consensus 225 v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~-----~~~~~~~~~~~~~V~~~~~Spdg-~~lasgs~D~~V~iwd 297 (365)
T 4h5i_A 225 INFIADDT-VLIAASLKKGKGIVLTKISIKSGNTS-----VLRSKQVTNRFKGITSMDVDMKG-ELAVLASNDNSIALVK 297 (365)
T ss_dssp EEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEE-----EEEEEEEESSCSCEEEEEECTTS-CEEEEEETTSCEEEEE
T ss_pred EEEcCCCC-EEEEEecCCcceeEEeecccccceec-----ceeeeeecCCCCCeEeEEECCCC-CceEEEcCCCEEEEEE
Confidence 99999876 677777666 6888998765210 12245677899999999999998 9999999999999999
Q ss_pred CCCCCeeEEEE-ecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 434 LSNNQPSCIAS-RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 434 ~~~~~~~~~~~-~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+.+++ ++.. ..+|.++|++++|+||++ +||+|+.|++|+||++..+....
T Consensus 298 ~~~~~--~~~~~~~gH~~~V~~v~fSpdg~-~laS~S~D~tvrvw~ip~~~~~~ 348 (365)
T 4h5i_A 298 LKDLS--MSKIFKQAHSFAITEVTISPDST-YVASVSAANTIHIIKLPLNYANY 348 (365)
T ss_dssp TTTTE--EEEEETTSSSSCEEEEEECTTSC-EEEEEETTSEEEEEECCTTTTC-
T ss_pred CCCCc--EEEEecCcccCCEEEEEECCCCC-EEEEEeCCCeEEEEEcCCCCcCc
Confidence 99987 4555 478999999999999999 59999999999999997654433
No 51
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=2.6e-34 Score=275.56 Aligned_cols=249 Identities=25% Similarity=0.412 Sum_probs=210.5
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|++++||+|+.||.|+||++.... ....+.+|...|.+++
T Consensus 27 ~~~~~-------s~~~~~l~s~~~dg~i~iw~~~~~~---------------------------~~~~~~~h~~~v~~~~ 72 (312)
T 4ery_A 27 SSVKF-------SPNGEWLASSSADKLIKIWGAYDGK---------------------------FEKTISGHKLGISDVA 72 (312)
T ss_dssp EEEEE-------CTTSSEEEEEETTSCEEEEETTTCC---------------------------EEEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEeeCCCeEEEEeCCCcc---------------------------cchhhccCCCceEEEE
Confidence 67777 7899999999999999999986422 2223457999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecC
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA 353 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 353 (502)
|+|+ +++|++|+.|+.|++||+.+++++..+.+|...|.+++|+|++ .+|++|+.|+.|++||+++.+.......+..
T Consensus 73 ~~~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 150 (312)
T 4ery_A 73 WSSD-SNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGKCLKTLPAHSD 150 (312)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCCEEEEECCCSS
T ss_pred EcCC-CCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCEEEEEecCCCC
Confidence 9999 5799999999999999999999999999999999999999998 8999999999999999998877665667888
Q ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.|.+++|+|++. ++++++.||.|++||+++. ..+..+ ..+..++.+++|+|++ .+|++++.|+.|++|
T Consensus 151 ~v~~~~~~~~~~-~l~~~~~d~~i~~wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iw 219 (312)
T 4ery_A 151 PVSAVHFNRDGS-LIVSSSYDGLCRIWDTASG---------QCLKTLIDDDNPPVSFVKFSPNG-KYILAATLDNTLKLW 219 (312)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEETTTC---------CEEEEECCSSCCCEEEEEECTTS-SEEEEEETTTEEEEE
T ss_pred cEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC---------ceeeEEeccCCCceEEEEECCCC-CEEEEEcCCCeEEEE
Confidence 999999999865 8999999999999999986 444444 4567789999999998 899999999999999
Q ss_pred ECCCCCeeEEEEecCCCCCE--EEEEEc-CCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 433 DLSNNQPSCIASRNPKAGAV--FSVAFS-EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v--~~~~~s-pd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
|+++++ ++..+.+|...+ ....|+ +++. +|++|+.||.|++||+.+++.+..+.++.
T Consensus 220 d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~~~~~~~~~h~ 279 (312)
T 4ery_A 220 DYSKGK--CLKTYTGHKNEKYCIFANFSVTGGK-WIVSGSEDNLVYIWNLQTKEIVQKLQGHT 279 (312)
T ss_dssp ETTTTE--EEEEECSSCCSSSCCCEEEECSSSC-EEEECCTTSCEEEEETTTCCEEEEECCCS
T ss_pred ECCCCc--EEEEEEecCCceEEEEEEEEeCCCc-EEEEECCCCEEEEEECCCchhhhhhhccC
Confidence 999887 455566665432 223444 5666 69999999999999999998887665553
No 52
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=1.6e-33 Score=281.79 Aligned_cols=289 Identities=21% Similarity=0.349 Sum_probs=226.0
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
-..+.|.|+++ ++||+|. ++ .|++|+...+....++..+ .......|++| +|+|++||+|+.||
T Consensus 106 ~y~~~l~wS~~-n~lAvgl-d~-----tV~lWd~~tg~~~~~~~~~--~~~~~V~sv~f-------spdg~~lasgs~Dg 169 (420)
T 4gga_A 106 YYLNLVDWSSG-NVLAVAL-DN-----SVYLWSASSGDILQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSA 169 (420)
T ss_dssp TTCBCEEECTT-SEEEEEE-TT-----EEEEEETTTCCEEEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTS
T ss_pred ccceeEEECCC-CEEEEEe-CC-----EEEEEECCCCCEEEEEEec--CCCCcEEEEEE-------CCCCCEEEEEECCC
Confidence 34677999975 5777775 55 5555555444111111111 11233478888 79999999999999
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|+||++.+.. ....+.+|...|.+++|++ .+|++|+.|+.+++||....
T Consensus 170 ~v~iWd~~~~~---------------------------~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~ 219 (420)
T 4gga_A 170 EVQLWDVQQQK---------------------------RLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVA 219 (420)
T ss_dssp CEEEEETTTTE---------------------------EEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSS
T ss_pred eEEEEEcCCCc---------------------------EEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeeccc
Confidence 99999997532 2334568999999999975 48999999999999998864
Q ss_pred -eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc----cceEeecCCeEEEEeCCCCCCEEEEE--e
Q 010769 300 -KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GFKWAVAADVESLAWDPHAEHSFVVS--L 372 (502)
Q Consensus 300 -~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~v~~v~~~p~~~~~l~~~--~ 372 (502)
..+..+.+|...+..+.|+|.+ .++++++.|+.+++|+.+..... .....+...|.+++|+|.+..+++++ +
T Consensus 220 ~~~~~~~~~h~~~~~~~~~~~~g-~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs 298 (420)
T 4gga_A 220 EHHVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGT 298 (420)
T ss_dssp SCEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECT
T ss_pred ceeeEEecccccceeeeeecCCC-CeeeeeeccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeec
Confidence 4567788999999999999999 89999999999999999876542 23346778899999999988887764 4
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe--CCCcEEEEECCCCCeeEEEEecCCCC
Q 010769 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASRNPKAG 450 (502)
Q Consensus 373 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~dg~i~vwd~~~~~~~~~~~~~~~~~ 450 (502)
.|+.|++||++++ .....+.. ...+.++.|+|++ ..+++++ .|+.|+|||+.+++ ++..+.+|.+
T Consensus 299 ~D~~I~iwd~~t~---------~~~~~~~~-~~~v~~~~~~~~~-~~lv~~sg~~d~~I~iwd~~~~~--~v~~l~gH~~ 365 (420)
T 4gga_A 299 SDRHIRIWNVCSG---------ACLSAVDA-HSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTS 365 (420)
T ss_dssp TTCEEEEEETTTT---------EEEEEEEC-SSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSS
T ss_pred CCCEEEEEeCCcc---------ccceeecc-ccceeeeeecCCC-CeEEEEEecCCCEEEEEECCCCc--EEEEEcCCCC
Confidence 7999999999986 55666654 4578999999998 5555544 69999999999987 6778899999
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.|++++|+|+|.+ |++|+.|++|+|||+......++.-
T Consensus 366 ~V~~l~~spdg~~-l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 366 RVLSLTMSPDGAT-VASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp CEEEEEECTTSSC-EEEEETTTEEEEECCSCSSCC----
T ss_pred CEEEEEEcCCCCE-EEEEecCCeEEEEECCCCCccchhh
Confidence 9999999999995 9999999999999998776655443
No 53
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=2e-34 Score=277.38 Aligned_cols=248 Identities=19% Similarity=0.272 Sum_probs=207.2
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.+++| +|+ +++|++|+.|++|++|++..... +.......+.+|...|.++
T Consensus 21 ~~l~~-------~~~~~~~l~s~s~D~~v~~W~~~~~~~----------------------~~~~~~~~~~~h~~~v~~~ 71 (319)
T 3frx_A 21 TSLAT-------SAGQPNLLLSASRDKTLISWKLTGDDQ----------------------KFGVPVRSFKGHSHIVQDC 71 (319)
T ss_dssp EEEEE-------CSSCTTEEEEEETTSEEEEEEEEEETT----------------------EEEEEEEEEECCSSCEEEE
T ss_pred EEEEc-------cCCCccEEEEecCCccEEEecCCCCCc----------------------cccccceEEeCCcccEEEE
Confidence 57777 564 58999999999999999853211 1122334566899999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 352 (502)
+|+|+ +.+|++|+.|++|+|||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||++.. .......|.
T Consensus 72 ~~s~d-g~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-~~~~~~~h~ 148 (319)
T 3frx_A 72 TLTAD-GAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-CLATLLGHN 148 (319)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-EEEEECCCS
T ss_pred EECCC-CCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-eEEEEeccC
Confidence 99999 5699999999999999999999999999999999999999998 89999999999999999753 334455788
Q ss_pred CCeEEEEeCCCC-----CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 353 ADVESLAWDPHA-----EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 353 ~~v~~v~~~p~~-----~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
..+.+++|+|.. ...+++++.|+.|++||+++. .....+.+|...|.+++|+|++ .+|++|+.||
T Consensus 149 ~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~---------~~~~~~~~h~~~v~~~~~sp~g-~~l~s~~~dg 218 (319)
T 3frx_A 149 DWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQF---------QIEADFIGHNSNINTLTASPDG-TLIASAGKDG 218 (319)
T ss_dssp SCEEEEEECCC------CCEEEEEETTSCEEEEETTTT---------EEEEEECCCCSCEEEEEECTTS-SEEEEEETTC
T ss_pred CcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcc---------hhheeecCCCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 899999999853 337999999999999999876 6677888999999999999998 9999999999
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|++||+.+.+. +..+.. ...|.+++|+|++. +|++++. +.+++|++.....+...
T Consensus 219 ~i~iwd~~~~~~--~~~~~~-~~~v~~~~~sp~~~-~la~~~~-~~i~v~~~~~~~~~~~~ 274 (319)
T 3frx_A 219 EIMLWNLAAKKA--MYTLSA-QDEVFSLAFSPNRY-WLAAATA-TGIKVFSLDPQYLVDDL 274 (319)
T ss_dssp EEEEEETTTTEE--EEEEEC-CSCEEEEEECSSSS-EEEEEET-TEEEEEEETTEEEEEEE
T ss_pred eEEEEECCCCcE--EEEecC-CCcEEEEEEcCCCC-EEEEEcC-CCcEEEEeCcCeeeecc
Confidence 999999998873 444444 36799999999998 4776665 46999999877665443
No 54
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.2e-34 Score=289.33 Aligned_cols=298 Identities=12% Similarity=0.164 Sum_probs=234.1
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+|++++|++|+.++ .+.+|. .... ....+..| .....++.| +|++++|++++.
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg---~i~i~~--~~~~-~~~~~~~~----~~~v~~~~~-------~~~~~~l~~~~~ 169 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENG---ELRLWN--KTGA-LLNVLNFH----RAPIVSVKW-------NKDGTHIISMDV 169 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTS---CEEEEE--TTSC-EEEEECCC----CSCEEEEEE-------CTTSSEEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCC---eEEEEe--CCCC-eeeeccCC----CccEEEEEE-------CCCCCEEEEEec
Confidence 577999999999999999999887 445554 2222 11111122 233467777 789999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
+|.|++|++.............. ............+...|.+++|+|+ + .+++++.+|.|++||+.
T Consensus 170 d~~i~iwd~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~g~i~~~d~~ 235 (425)
T 1r5m_A 170 ENVTILWNVISGTVMQHFELKET------------GGSSINAENHSGDGSLGVDVEWVDD-D-KFVIPGPKGAIFVYQIT 235 (425)
T ss_dssp TCCEEEEETTTTEEEEEECCC---------------------------CCCBSCCEEEET-T-EEEEECGGGCEEEEETT
T ss_pred CCeEEEEECCCCcEEEEeecccc------------CccceeeccccCCcceeeEEEEcCC-C-EEEEEcCCCeEEEEEcC
Confidence 99999999976433221110000 0000000111122333999999998 3 68999999999999999
Q ss_pred CCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeE
Q 010769 298 AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTI 377 (502)
Q Consensus 298 ~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i 377 (502)
+++.+..+..|...|.+++|+|++ .+|++++.||.|++||+++.........+...+.+++|+|++ ++++++.+|.|
T Consensus 236 ~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i 312 (425)
T 1r5m_A 236 EKTPTGKLIGHHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSV 312 (425)
T ss_dssp CSSCSEEECCCSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEE
T ss_pred CCceeeeeccCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCccceEecCCCccEEEEEECCCC--EEEEEeCCCcE
Confidence 999999999999999999999998 899999999999999999887776666788999999999976 89999999999
Q ss_pred EEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC------------------e
Q 010769 378 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ------------------P 439 (502)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~------------------~ 439 (502)
++||+++. ..+..+..|...|.+++|+|++ .+|++++.||.|++||+.+.. .
T Consensus 313 ~i~d~~~~---------~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (425)
T 1r5m_A 313 RLWSLKQN---------TLLALSIVDGVPIFAGRISQDG-QKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPI 382 (425)
T ss_dssp EEEETTTT---------EEEEEEECTTCCEEEEEECTTS-SEEEEEETTSCEEEEECHHHHC--------------CEEC
T ss_pred EEEECCCC---------cEeEecccCCccEEEEEEcCCC-CEEEEEECCCeEEEEECCCCccceeeeecccccccCcccc
Confidence 99999886 6788888999999999999998 899999999999999998765 0
Q ss_pred eEEEEecCCCC--CEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 440 SCIASRNPKAG--AVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 440 ~~~~~~~~~~~--~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
..+..+..|.. .|++++|+|+++ +|++++.||.|++|++.
T Consensus 383 ~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 383 PLYASYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp CEEEEECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred hhhhhhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 14666777766 999999999999 58899999999999985
No 55
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=6.1e-34 Score=276.94 Aligned_cols=243 Identities=21% Similarity=0.292 Sum_probs=196.4
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+++++||+|+.|++|+||++....... ........+.+|...|.+++|+|+ +.+|++|+
T Consensus 37 ~d~~~l~sgs~D~~v~iWd~~~~~~~~--------------------~~~~~~~~l~~h~~~V~~~~~~~~-~~~l~s~s 95 (343)
T 2xzm_R 37 EDSPVLISGSRDKTVMIWKLYEEEQNG--------------------YFGIPHKALTGHNHFVSDLALSQE-NCFAISSS 95 (343)
T ss_dssp CCCCEEEEEETTSCEEEEEECSSCCSS--------------------BSEEEEEEECCCSSCEEEEEECSS-TTEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCcCCccc--------------------ccccccchhccCCCceEEEEECCC-CCEEEEEc
Confidence 489999999999999999986432211 011223356689999999999999 56999999
Q ss_pred cCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc--eEeecCCeEEEEeCCCC
Q 010769 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--KWAVAADVESLAWDPHA 364 (502)
Q Consensus 287 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--~~~~~~~v~~v~~~p~~ 364 (502)
.|++|++||+.+++++..+.+|...|.+++|+|++ .+|++++.|++|++||++....... ...+...|.+++|+|.+
T Consensus 96 ~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 174 (343)
T 2xzm_R 96 WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIM 174 (343)
T ss_dssp TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCC
T ss_pred CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeecccc
Confidence 99999999999999999999999999999999999 8999999999999999974322111 11467789999999976
Q ss_pred C---------CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010769 365 E---------HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 365 ~---------~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
. .++++++.||.|++||.+ ......+.+|...|.+++|+|++ .+|++|+.|+.|++||+.
T Consensus 175 ~~~~~~~~~~~~l~s~~~d~~i~iwd~~----------~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~iwd~~ 243 (343)
T 2xzm_R 175 KSANKVQPFAPYFASVGWDGRLKVWNTN----------FQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLIWDIL 243 (343)
T ss_dssp CSCSCCCSSCCEEEEEETTSEEEEEETT----------TEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEEEESS
T ss_pred ccccccCCCCCEEEEEcCCCEEEEEcCC----------CceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEEEECC
Confidence 2 489999999999999943 25667888999999999999998 999999999999999995
Q ss_pred CCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 436 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
.... ....+ .+...|.+++|+|++. +|+ ++.++.|++|++.++..+.
T Consensus 244 ~~~~-~~~~~-~~~~~v~~v~~sp~~~-~la-~~~d~~v~iw~~~~~~~~~ 290 (343)
T 2xzm_R 244 NLTY-PQREF-DAGSTINQIAFNPKLQ-WVA-VGTDQGVKIFNLMTQSKAP 290 (343)
T ss_dssp CCSS-CSEEE-ECSSCEEEEEECSSSC-EEE-EEESSCEEEEESSSCCSCS
T ss_pred CCcc-cceee-cCCCcEEEEEECCCCC-EEE-EECCCCEEEEEeCCCCCCc
Confidence 4332 11222 2345699999999998 455 4567889999998876543
No 56
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-33 Score=273.22 Aligned_cols=255 Identities=20% Similarity=0.308 Sum_probs=212.6
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||.|+||++...... ......+.+|...|++++
T Consensus 15 ~~~~~-------~~~~~~l~~~~~dg~i~iw~~~~~~~~-----------------------~~~~~~~~~~~~~v~~~~ 64 (351)
T 3f3f_A 15 HDVVY-------DFYGRHVATCSSDQHIKVFKLDKDTSN-----------------------WELSDSWRAHDSSIVAID 64 (351)
T ss_dssp EEEEE-------CSSSSEEEEEETTSEEEEEEECSSSCC-----------------------EEEEEEEECCSSCEEEEE
T ss_pred eEEEE-------cCCCCEEEEeeCCCeEEEEECCCCCCc-----------------------ceecceeccCCCcEEEEE
Confidence 78888 789999999999999999999753211 123334568999999999
Q ss_pred ecCC-CCcEEEEEecCCcEEEEECCCC---------eeeEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCC
Q 010769 274 WNKE-FRNILASASADKQVKIWDVAAG---------KCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~Dg~v~vwd~~~~---------~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~ 341 (502)
|+|. .+.+|++|+.||+|++||+.++ +++..+..|...|.+++|+|+ + .+|++++.||.|++||+++
T Consensus 65 ~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~ 143 (351)
T 3f3f_A 65 WASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALE 143 (351)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSS
T ss_pred EcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCC
Confidence 9994 2579999999999999999887 668888899999999999999 7 8999999999999999998
Q ss_pred CCCccceE-------------eecCCeEEEEeCCC--CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCC
Q 010769 342 STHSGFKW-------------AVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA 406 (502)
Q Consensus 342 ~~~~~~~~-------------~~~~~v~~v~~~p~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~ 406 (502)
........ .+...+.+++|+|. ....+++++.++.+.+|+..... ...+..+.+|...
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~-------~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 144 PSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGK-------LHVAAKLPGHKSL 216 (351)
T ss_dssp TTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSC-------EEEEEECCCCCSC
T ss_pred hHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCc-------eeeeeecCCCCcc
Confidence 77544322 35667999999997 35589999999999888877652 1346777889999
Q ss_pred eeEEEEcCCCC---CEEEEEeCCCcEEEEECCCCC--------------------------------------------e
Q 010769 407 VCTISYNPLVP---NLLATGSTDKMVKLWDLSNNQ--------------------------------------------P 439 (502)
Q Consensus 407 v~~l~~sp~~~---~~l~t~s~dg~i~vwd~~~~~--------------------------------------------~ 439 (502)
|++++|+|+++ .+|++|+.||.|++||++... .
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 99999999864 699999999999999998641 2
Q ss_pred eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 440 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 440 ~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
..+..+.+|.+.|++++|+|+++ +|++|+.||.|+||++.++..+..
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~~~~~ 343 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSNEFKC 343 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTSCEEE
T ss_pred cEEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCcchhh
Confidence 45667788999999999999999 499999999999999998876543
No 57
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=4.9e-35 Score=281.33 Aligned_cols=249 Identities=22% Similarity=0.329 Sum_probs=199.6
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.+++| +|+|++||+|+.|++|+|||+.... ......+.+|...|++++
T Consensus 17 ~~v~~-------s~~g~~lasgs~D~~v~lwd~~~~~-------------------------~~~~~~l~gH~~~V~~v~ 64 (316)
T 3bg1_A 17 HDAQM-------DYYGTRLATCSSDRSVKIFDVRNGG-------------------------QILIADLRGHEGPVWQVA 64 (316)
T ss_dssp EEEEE-------CGGGCEEEEEETTTEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEE
T ss_pred EEeeE-------cCCCCEEEEEeCCCeEEEEEecCCC-------------------------cEEEEEEcCCCccEEEEE
Confidence 67777 7899999999999999999986421 112234568999999999
Q ss_pred ecCC-CCcEEEEEecCCcEEEEECCCC--eeeEEeccCCCCeEEEEEcCCC-CcEEEEEECCCcEEEEeCCCCCC---cc
Q 010769 274 WNKE-FRNILASASADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHS-PQILLSGSFDRSVVMKDARISTH---SG 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~---~~ 346 (502)
|++. .+++|++|+.|++|++||+.++ +.+..+.+|...|.+++|+|++ ..+|++|+.|++|++|+++.... ..
T Consensus 65 ~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~ 144 (316)
T 3bg1_A 65 WAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKK 144 (316)
T ss_dssp ECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECC
T ss_pred eCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceee
Confidence 9753 3569999999999999999987 4667788999999999999983 27899999999999999987532 12
Q ss_pred ceEeecCCeEEEEeCCCC----------------CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEE
Q 010769 347 FKWAVAADVESLAWDPHA----------------EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~----------------~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 410 (502)
....|...+.+++|+|+. ..+|++|+.|+.|++||++.... ..++..+.+|...|.++
T Consensus 145 ~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~------~~~~~~l~~h~~~V~~v 218 (316)
T 3bg1_A 145 INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ------WKEEQKLEAHSDWVRDV 218 (316)
T ss_dssp BTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC------EEEEECCBCCSSCEEEE
T ss_pred eeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc------cceeeecccCCCceEEE
Confidence 233567789999999963 24799999999999999975310 13456678999999999
Q ss_pred EEcCCC---CCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 411 SYNPLV---PNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 411 ~~sp~~---~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+|+|++ ..+|++|+.|++|++|++..... .....+..|.+.|++++|+|+++ +||+|+.||.|+||+...
T Consensus 219 ~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~-~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 219 AWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITAN-ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp ECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTC-CEEEEESSSCEEEEEECT
T ss_pred EecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCC-EEEEEcCCCeEEEEEECC
Confidence 999975 37899999999999999976310 01122345678999999999999 499999999999999863
No 58
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.6e-33 Score=272.37 Aligned_cols=246 Identities=21% Similarity=0.348 Sum_probs=192.6
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.++.| +++ +||+|+.|+.|+||++....... .......+|...|.+|+
T Consensus 18 ~~~~~-------s~~--~las~~~D~~i~lw~~~~~~~~~-----------------------~~~~~~~~h~~~v~~v~ 65 (330)
T 2hes_X 18 WSFDF-------SQG--ILATGSTDRKIKLVSVKYDDFTL-----------------------IDVLDETAHKKAIRSVA 65 (330)
T ss_dssp EEEEE-------ETT--EEEEEESSSCEEEEECSSSCCEE-----------------------EEEECTTCCCSCEEEEE
T ss_pred eeecc-------CCC--EEEEEcCCCEEEEEEecCCCeEE-----------------------EEEEecCCccCCEEEEE
Confidence 56666 444 99999999999999996421100 00001124999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCC-------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC---
Q 010769 274 WNKEFRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST--- 343 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~--- 343 (502)
|+|+ +.+|++|+.|++|+||++.. .+++..+.+|...|.+++|+|++ .+|++|+.|++|++||++...
T Consensus 66 ~sp~-~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~ 143 (330)
T 2hes_X 66 WRPH-TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEY 143 (330)
T ss_dssp ECTT-SSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCC
T ss_pred ECCC-CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCe
Confidence 9999 56999999999999999853 45677889999999999999998 899999999999999995432
Q ss_pred -CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC-CCEEE
Q 010769 344 -HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV-PNLLA 421 (502)
Q Consensus 344 -~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~ 421 (502)
.......|...|.+++|+|++. +|++++.|+.|++||++... ..++..+.+|...|.+++|+|++ ..+|+
T Consensus 144 ~~~~~~~~h~~~v~~v~~~p~~~-~l~s~s~D~~i~iW~~~~~~-------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~ 215 (330)
T 2hes_X 144 ECISVLQEHSQDVKHVIWHPSEA-LLASSSYDDTVRIWKDYDDD-------WECVAVLNGHEGTVWSSDFDKTEGVFRLC 215 (330)
T ss_dssp EEEEEECCCSSCEEEEEECSSSS-EEEEEETTSCEEEEEEETTE-------EEEEEEECCCSSCEEEEEECCSSSSCEEE
T ss_pred EEEEEeccCCCceEEEEECCCCC-EEEEEcCCCeEEEEECCCCC-------eeEEEEccCCCCcEEEEEecCCCCeeEEE
Confidence 2223446788999999999865 89999999999999987641 25677889999999999999983 26899
Q ss_pred EEeCCCcEEEEECCCCCe------eEEEEecC-CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 422 TGSTDKMVKLWDLSNNQP------SCIASRNP-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 422 t~s~dg~i~vwd~~~~~~------~~~~~~~~-~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
+|+.|++|++|++..... .+...+.. |...|.+++|++++ +|++++.||.|+||++.++.
T Consensus 216 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~~~ 282 (330)
T 2hes_X 216 SGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVDGE 282 (330)
T ss_dssp EEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEETTE
T ss_pred EEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCCCc
Confidence 999999999999865421 23444444 88999999999776 48999999999999998763
No 59
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.5e-34 Score=288.03 Aligned_cols=303 Identities=13% Similarity=0.156 Sum_probs=223.5
Q ss_pred CCCccccccccccC-CCceEEEEEecCCcceeEEEEEec---CCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCE
Q 010769 136 DEDSEDLEDMTINP-NDAVIVCARNEDDVSHLEVYILEE---SDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF 211 (502)
Q Consensus 136 ~~~~~~v~~~~~~p-~~~~l~~~~~~~~~~~l~v~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~ 211 (502)
..|...|.+++|+| ++++|++|+.++ .++||.+.. .......+...|. ....|++| +|++++
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg---~v~vwd~~~~~~~~~~~~~~~~~h~----~~v~~~~~-------~~~~~~ 125 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQG---VIKIWNLKEIIVGEVYSSSLTYDCS----STVTQITM-------IPNFDA 125 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTS---EEEEEEHHHHHTTCCCSCSEEEECS----SCEEEEEE-------CTTSSE
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCc---eEEEeECcccccCcccceeeeccCC----CCEEEEEE-------eCCCCE
Confidence 45789999999999 999999999887 667777665 2211112222333 33478888 689999
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE--ecCCCCcEEEEEecCC
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA--WNKEFRNILASASADK 289 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~--~~~~~~~~l~sgs~Dg 289 (502)
|++|+.||.|+||++...........+.. ...........++...+.++. ++++ +.+|++|+.||
T Consensus 126 l~s~s~dg~i~vwd~~~~~~~~~~~~~~~------------~~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~d~ 192 (437)
T 3gre_A 126 FAVSSKDGQIIVLKVNHYQQESEVKFLNC------------ECIRKINLKNFGKNEYAVRMRAFVNEE-KSLLVALTNLS 192 (437)
T ss_dssp EEEEETTSEEEEEEEEEEEETTEEEEEEE------------EEEEEEEGGGGSSCCCEEEEEEEECSS-CEEEEEEETTS
T ss_pred EEEEeCCCEEEEEEeccccCCceeecccc------------ceeEEEEccCcccccCceEEEEEEcCC-CCEEEEEeCCC
Confidence 99999999999999852100000000000 000001111111667788888 5577 67999999999
Q ss_pred cEEEEECCCCeeeEEecc--CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCC---
Q 010769 290 QVKIWDVAAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH--- 363 (502)
Q Consensus 290 ~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~--- 363 (502)
+|++||+.+++++..+.. |...|++++|+|++ .+|++|+.||.|++||+++........ .+...|.+++|+|.
T Consensus 193 ~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~ 271 (437)
T 3gre_A 193 RVIIFDIRTLERLQIIENSPRHGAVSSICIDEEC-CVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGK 271 (437)
T ss_dssp EEEEEETTTCCEEEEEECCGGGCCEEEEEECTTS-CEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCT
T ss_pred eEEEEeCCCCeeeEEEccCCCCCceEEEEECCCC-CEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCC
Confidence 999999999999999987 89999999999998 899999999999999999876554322 55668999977763
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe------------------------c--CCCCeeEEEEcCCCC
Q 010769 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH------------------------A--HDKAVCTISYNPLVP 417 (502)
Q Consensus 364 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~------------------------~--h~~~v~~l~~sp~~~ 417 (502)
...++++|+.||.|++||++++. .+..+. + |...|++++|+ ++
T Consensus 272 ~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~- 340 (437)
T 3gre_A 272 NSVIVVGGSSKTFLTIWNFVKGH---------CQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND- 340 (437)
T ss_dssp TEEEEEEESTTEEEEEEETTTTE---------EEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-
T ss_pred CccEEEEEcCCCcEEEEEcCCCc---------EEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-
Confidence 23489999999999999998762 222222 2 66779999999 45
Q ss_pred CEEEEEeCCCcEEEEECCCCCeeEEEEe-----------------------------------cCCCCCEEEEEEcCC--
Q 010769 418 NLLATGSTDKMVKLWDLSNNQPSCIASR-----------------------------------NPKAGAVFSVAFSED-- 460 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~~~~~~~~~-----------------------------------~~~~~~v~~~~~spd-- 460 (502)
.+|++|+.|+.|++||+.+++....... ..|...|++++|+++
T Consensus 341 ~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~ 420 (437)
T 3gre_A 341 KILLTDEATSSIVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDE 420 (437)
T ss_dssp EEEEEEGGGTEEEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSS
T ss_pred eEEEecCCCCeEEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCC
Confidence 8999999999999999998764322221 128899999999998
Q ss_pred CCcEEEEEeCCCcEEEEE
Q 010769 461 SPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 461 ~~~llasg~~dg~i~vwd 478 (502)
+. +|++|+.||.|+||+
T Consensus 421 ~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 421 TP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp SE-EEEEEETTSCEEEEC
T ss_pred ce-EEEEEcCCceEEEeC
Confidence 55 799999999999995
No 60
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.2e-33 Score=281.51 Aligned_cols=319 Identities=13% Similarity=0.209 Sum_probs=220.4
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCC----CC-----ceeeeec--------cccCCCcceeeee
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGG----DP-----NLYVHHH--------IIIPAFPLCMAWL 199 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~----~~-----~l~~~~~--------~~~~~~~~~~~w~ 199 (502)
.+.+.|.+++|+|++++||+|+.++ .+.||.+...... .. ..+..|. ..+.....++.|
T Consensus 26 ~~~~~V~~v~~s~~g~~la~g~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~- 101 (447)
T 3dw8_B 26 AEADIISTVEFNHSGELLATGDKGG---RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW- 101 (447)
T ss_dssp CGGGSEEEEEECSSSSEEEEEETTS---EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE-
T ss_pred cccCcEEEEEECCCCCEEEEEcCCC---eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE-
Confidence 3678999999999999999999887 5677776654310 00 1111221 001134577887
Q ss_pred cCCCCCCCCC--CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhh-ccccC------------CccccccccCC
Q 010769 200 DCPLKDREKG--NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKK-KSKKG------------KKSSIKYKKGS 264 (502)
Q Consensus 200 ~~~~~~s~~~--~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~-~~~~~------------~~~~~~~~~~~ 264 (502)
+|++ .+|++|+.|+.|+||++...........+.......... ..... ..........+
T Consensus 102 ------~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 175 (447)
T 3dw8_B 102 ------LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANA 175 (447)
T ss_dssp ------CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSC
T ss_pred ------cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccC
Confidence 6777 899999999999999986532210000000000000000 00000 00001122468
Q ss_pred cccceeeEEecCCCCcEEEEEecCCcEEEEECCC-CeeeE-------EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEE
Q 010769 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAA-GKCNL-------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~-~~~~~-------~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 336 (502)
|...|++++|+|+ +.+|++| .|++|++||+.+ ++++. .+.+|...|.+++|+|+++.+|++|+.||.|++
T Consensus 176 h~~~v~~~~~~~~-~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~i 253 (447)
T 3dw8_B 176 HTYHINSISINSD-YETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRL 253 (447)
T ss_dssp CSSCCCEEEECTT-SSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred CCcceEEEEEcCC-CCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEE
Confidence 9999999999998 5689998 799999999984 44444 356899999999999998789999999999999
Q ss_pred EeCCCCCC----ccceEeecC------------CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE
Q 010769 337 KDARISTH----SGFKWAVAA------------DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL 400 (502)
Q Consensus 337 wd~~~~~~----~~~~~~~~~------------~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 400 (502)
||+++... ......+.. .|.+++|+|++. ++++++. |.|++||+++. ..++..+
T Consensus 254 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~-~~v~iwd~~~~--------~~~~~~~ 323 (447)
T 3dw8_B 254 CDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR-YMMTRDY-LSVKVWDLNME--------NRPVETY 323 (447)
T ss_dssp EETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS-EEEEEES-SEEEEEETTCC--------SSCSCCE
T ss_pred EECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC-EEEEeeC-CeEEEEeCCCC--------cccccee
Confidence 99998775 333334443 899999999865 7888888 99999999973 2666777
Q ss_pred ecCCCC---------------eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe--------------------
Q 010769 401 HAHDKA---------------VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-------------------- 445 (502)
Q Consensus 401 ~~h~~~---------------v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-------------------- 445 (502)
..|... +..++|+|++ .+|++|+.||.|++||+.+++...+...
T Consensus 324 ~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (447)
T 3dw8_B 324 QVHEYLRSKLCSLYENDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGK 402 (447)
T ss_dssp ESCGGGTTTHHHHHHTSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSC
T ss_pred eccccccccccccccccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCC
Confidence 777532 3349999998 8999999999999999998874322111
Q ss_pred ----------cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 446 ----------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 446 ----------~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
..+...|.+++|+|++. +||+++.++ +++|..+
T Consensus 403 ~~~~~~~~~~~~~~~~i~~~~~~p~~~-~la~~~~~~-~~~~~~~ 445 (447)
T 3dw8_B 403 RKKDEISVDSLDFNKKILHTAWHPKEN-IIAVATTNN-LYIFQDK 445 (447)
T ss_dssp CCTTCEEGGGCCTTSCCCEEEECSSSS-EEEEECSSC-EEEEECC
T ss_pred cccccccccccccCCceeEEEECCCCC-EEEEEecce-eeeeccc
Confidence 12345688999999999 588877664 8888754
No 61
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=7.2e-33 Score=274.92 Aligned_cols=303 Identities=14% Similarity=0.218 Sum_probs=224.3
Q ss_pred CCccccccccccC-CCceEEEEEecCCcceeEEEEEecCCCCCCceeee---------eccccCCCcceeeeecCCCCCC
Q 010769 137 EDSEDLEDMTINP-NDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVH---------HHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 137 ~~~~~v~~~~~~p-~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~---------~~~~~~~~~~~~~w~~~~~~~s 206 (502)
.|...|.+++|+| ++++|++|+.++ .+.||.+...... ..+.. +.........++.| +
T Consensus 41 ~h~~~v~~~~~s~~~~~~l~~~~~dg---~i~iw~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~ 108 (408)
T 4a11_B 41 IHGGGINTLDIEPVEGRYMLSGGSDG---VIVLYDLENSSRQ--SYYTCKAVCSIGRDHPDVHRYSVETVQW-------Y 108 (408)
T ss_dssp CCSSCEEEEEECTTTCCEEEEEETTS---CEEEEECCCCSSS--SCEEECEEEEECTTCTTCCSSCEEEEEE-------C
T ss_pred ccCCcEEEEEEecCCCCEEEEEcCCC---eEEEEECCCCccc--ceEeccccccccccccccCCCcEEEEEE-------c
Confidence 3888999999999 999999999887 5677776654431 11110 00012233467777 5
Q ss_pred C-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC--CcEEE
Q 010769 207 E-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF--RNILA 283 (502)
Q Consensus 207 ~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~--~~~l~ 283 (502)
| ++++|++|+.||.|++|++....... . ..+...+.++.|++.+ ..+|+
T Consensus 109 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~---------------------------~-~~~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 109 PHDTGMFTSSSFDKTLKVWDTNTLQTAD---------------------------V-FNFEETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp TTCTTCEEEEETTSEEEEEETTTTEEEE---------------------------E-EECSSCEEEEEECSSCSSCCEEE
T ss_pred cCCCcEEEEEeCCCeEEEeeCCCCccce---------------------------e-ccCCCceeeeEeecCCCCCcEEE
Confidence 6 78899999999999999997532211 1 1366789999999863 34999
Q ss_pred EEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce---------------
Q 010769 284 SASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--------------- 348 (502)
Q Consensus 284 sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--------------- 348 (502)
+|+.+|.|++||+.+++.+..+..|...|.+++|+|++..+|++++.||.|++||++........
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESA 240 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTS
T ss_pred EEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccc
Confidence 99999999999999999999999999999999999999557999999999999999876522211
Q ss_pred -EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 349 -WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 349 -~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
..+...|.+++|+|++. ++++++.||.|++||+++....... ...........+. +.+.......+++++.++
T Consensus 241 ~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~vwd~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 314 (408)
T 4a11_B 241 NTAHNGKVNGLCFTSDGL-HLLTVGTDNRMRLWNSSNGENTLVN----YGKVCNNSKKGLK-FTVSCGCSSEFVFVPYGS 314 (408)
T ss_dssp SCSCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCCBCCCC----CCCCCCCCSSCCC-CEECCSSSSCEEEEEETT
T ss_pred cccccCceeEEEEcCCCC-EEEEecCCCeEEEEECCCCccceec----cccccccccccce-eEEecCCCceEEEEecCC
Confidence 35778899999999865 8999999999999999987321100 0000011111222 222222236677778899
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|++||+.+++ .+..+.+|.+.|++++|+|+++ +|++|+.||.|++|++.+++.+...
T Consensus 315 ~i~v~d~~~~~--~~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 315 TIAVYTVYSGE--QITMLKGHYKTVDCCVFQSNFQ-ELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEEEETTTCC--EEEEECCCSSCEEEEEEETTTT-EEEEEETTSCEEEEEECC-------
T ss_pred EEEEEECcCCc--ceeeeccCCCeEEEEEEcCCCC-EEEEECCCCeEEEEeCCCCCccCCC
Confidence 99999999987 5777888999999999999999 5999999999999999998877543
No 62
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-33 Score=303.20 Aligned_cols=291 Identities=19% Similarity=0.252 Sum_probs=238.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|.+.|.+++|+|++++|++|+.++ .+.||.+..... ...+..| .....|+.| +|++++||+|+
T Consensus 11 ~h~~~v~~i~~sp~~~~la~~~~~g---~v~iwd~~~~~~--~~~~~~~----~~~v~~~~~-------s~~~~~l~~~~ 74 (814)
T 3mkq_A 11 NRSDRVKGIDFHPTEPWVLTTLYSG---RVEIWNYETQVE--VRSIQVT----ETPVRAGKF-------IARKNWIIVGS 74 (814)
T ss_dssp EECSCEEEEEECSSSSEEEEEETTS---EEEEEETTTTEE--EEEEECC----SSCEEEEEE-------EGGGTEEEEEE
T ss_pred cCCCceEEEEECCCCCEEEEEeCCC---EEEEEECCCCce--EEEEecC----CCcEEEEEE-------eCCCCEEEEEe
Confidence 4788999999999999999999876 455555443221 1111122 233478888 68999999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.+|.|+||++.++. ....+.+|...|++++|+|+ +.+|++|+.||+|++|++
T Consensus 75 ~dg~i~vw~~~~~~---------------------------~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~dg~i~vw~~ 126 (814)
T 3mkq_A 75 DDFRIRVFNYNTGE---------------------------KVVDFEAHPDYIRSIAVHPT-KPYVLSGSDDLTVKLWNW 126 (814)
T ss_dssp TTSEEEEEETTTCC---------------------------EEEEEECCSSCEEEEEECSS-SSEEEEEETTSEEEEEEG
T ss_pred CCCeEEEEECCCCc---------------------------EEEEEecCCCCEEEEEEeCC-CCEEEEEcCCCEEEEEEC
Confidence 99999999997532 22234579999999999999 568999999999999999
Q ss_pred CCC-eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec-CCeEEEEeCC--CCCCEEEEEe
Q 010769 297 AAG-KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA-ADVESLAWDP--HAEHSFVVSL 372 (502)
Q Consensus 297 ~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~-~~v~~v~~~p--~~~~~l~~~~ 372 (502)
.++ .....+.+|...|.+++|+|.++.+|++++.||.|++||++..........+. ..+.+++|+| ++. ++++++
T Consensus 127 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~~~~ 205 (814)
T 3mkq_A 127 ENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP-YMITAS 205 (814)
T ss_dssp GGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC-EEEEEC
T ss_pred CCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC-EEEEEe
Confidence 987 77788889999999999999333899999999999999998877655444443 7899999999 655 899999
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCE
Q 010769 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 373 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
.+|.|++||+++. ..+..+..|...|++++|+|++ .+|++++.||.|++||+.+++ .+..+..|...+
T Consensus 206 ~dg~i~~~d~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~v 273 (814)
T 3mkq_A 206 DDLTIKIWDYQTK---------SCVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK--VEKTLNVGLERS 273 (814)
T ss_dssp TTSEEEEEETTTT---------EEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS--EEEEECCSSSSE
T ss_pred CCCEEEEEECCCC---------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc--EEEEeecCCCcE
Confidence 9999999999886 6788889999999999999998 899999999999999999887 566777888999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 453 ~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
.+++|+|++..++++++.++.+.+|++.....
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (814)
T 3mkq_A 274 WCIATHPTGRKNYIASGFDNGFTVLSLGNDEP 305 (814)
T ss_dssp EEEEECTTCGGGEEEEEETTEEEEEECSCCSC
T ss_pred EEEEEccCCCceEEEEEeCCCEEEEEcCCCCc
Confidence 99999999976545556677899999876543
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.4e-33 Score=275.45 Aligned_cols=250 Identities=23% Similarity=0.360 Sum_probs=207.2
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||.|+||++.... ......+.+|...|++++
T Consensus 15 ~~~~~-------s~~~~~l~~~~~dg~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~~~ 62 (379)
T 3jrp_A 15 HDAVL-------DYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 62 (379)
T ss_dssp EEEEE-------CSSSSEEEEEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEECCCcEEEEecCCCc-------------------------ceeeeEecCCCCcEEEEE
Confidence 67877 7899999999999999999986311 223334568999999999
Q ss_pred ecCC-CCcEEEEEecCCcEEEEECCCCe--eeEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCCcc--
Q 010769 274 WNKE-FRNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHSG-- 346 (502)
Q Consensus 274 ~~~~-~~~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~-- 346 (502)
|+++ .+.+|++|+.||.|++||+.+++ .+..+..|...|.+++|+|+ + .+|++++.|+.|++||++......
T Consensus 63 ~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~~~~ 141 (379)
T 3jrp_A 63 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPI 141 (379)
T ss_dssp ECCGGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCCCEE
T ss_pred eCCCCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCceeeE
Confidence 9865 24699999999999999999987 77888889999999999999 6 899999999999999999874432
Q ss_pred ceEeecCCeEEEEeCCC------------CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC
Q 010769 347 FKWAVAADVESLAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....+...|.+++|+|. ...++++++.||.|++||++..... ......+.+|...|.+++|+|
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~-----~~~~~~~~~h~~~v~~~~~sp 216 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 216 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc-----eeeEEEEecccCcEeEEEECC
Confidence 34467889999999994 3458999999999999999876210 124567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCe---eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 415 LV--PNLLATGSTDKMVKLWDLSNNQP---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~---~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
++ +.+|++++.||.|++||+..... ..+.....|...|++++|+|++++ |++++.||.|++|++...
T Consensus 217 ~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~-l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 217 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLE 288 (379)
T ss_dssp CCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC-EEEEESSSSEEEEEEEET
T ss_pred CCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCE-EEEecCCCcEEEEeCCCC
Confidence 93 39999999999999999998642 223333458889999999999995 888999999999999854
No 64
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=1.8e-33 Score=280.95 Aligned_cols=286 Identities=13% Similarity=0.153 Sum_probs=220.6
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
..+....++|++++|++|+.++ .+.||.+. .......+..| .....|++| +|++++|++|+.|+
T Consensus 98 ~~~~~~~~~~~~~~l~~~~~dg---~i~iwd~~--~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l~s~s~d~ 161 (420)
T 3vl1_A 98 DYTAVDTAKLQMRRFILGTTEG---DIKVLDSN--FNLQREIDQAH----VSEITKLKF-------FPSGEALISSSQDM 161 (420)
T ss_dssp CEEEEEEECSSSCEEEEEETTS---CEEEECTT--SCEEEEETTSS----SSCEEEEEE-------CTTSSEEEEEETTS
T ss_pred CceEEEEEecCCCEEEEEECCC---CEEEEeCC--Ccceeeecccc----cCccEEEEE-------CCCCCEEEEEeCCC
Confidence 4455567899999999999887 44555443 32111111122 334478877 78999999999999
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|++||+...... ..+.+|...|.+++|+|+ +.+|++|+.||+|++||+.++
T Consensus 162 ~i~iwd~~~~~~~---------------------------~~~~~h~~~v~~~~~~~~-~~~l~s~~~d~~v~iwd~~~~ 213 (420)
T 3vl1_A 162 QLKIWSVKDGSNP---------------------------RTLIGHRATVTDIAIIDR-GRNVLSASLDGTIRLWECGTG 213 (420)
T ss_dssp EEEEEETTTCCCC---------------------------EEEECCSSCEEEEEEETT-TTEEEEEETTSCEEEEETTTT
T ss_pred eEEEEeCCCCcCc---------------------------eEEcCCCCcEEEEEEcCC-CCEEEEEcCCCcEEEeECCCC
Confidence 9999999753322 234579999999999999 569999999999999999999
Q ss_pred eeeEEecc---CCCCeEEE---------------------EEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCC
Q 010769 300 KCNLTLEH---HTDKVQAV---------------------AWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAAD 354 (502)
Q Consensus 300 ~~~~~~~~---h~~~v~~l---------------------~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~ 354 (502)
+++..+.. |...|.++ +|+|++ .+|++|+.||.|++||+++........ .+...
T Consensus 214 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~ 292 (420)
T 3vl1_A 214 TTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYG-KYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCS 292 (420)
T ss_dssp EEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTT-EEEEEEETTSCEEEEETTTCCEEEEECCTTSSC
T ss_pred ceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCC-CEEEEEcCCCeEEEEECCCCceeEEcccccCCC
Confidence 99988864 34445544 457777 899999999999999999877654333 35678
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
+.+++|+|++..++++|+.||.|++||+++. ..++..+.. |...|+++.+. ++ .+|++++.|+.|++|+
T Consensus 293 v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~--------~~~~~~~~~~~~~~v~~~~~~-~~-~~l~s~~~d~~v~iw~ 362 (420)
T 3vl1_A 293 CNSLTVDGNNANYIYAGYENGMLAQWDLRSP--------ECPVGEFLINEGTPINNVYFA-AG-ALFVSSGFDTSIKLDI 362 (420)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCT--------TSCSEEEEESTTSCEEEEEEE-TT-EEEEEETTTEEEEEEE
T ss_pred ceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC--------cCchhhhhccCCCCceEEEeC-CC-CEEEEecCCccEEEEe
Confidence 9999999988778999999999999999987 355677776 67788888665 45 7999999999999999
Q ss_pred CCCCCe-------eEEEEecCCCCCEEEEEEcCCCC---cEEEEEeCCCcEEEEECCC
Q 010769 434 LSNNQP-------SCIASRNPKAGAVFSVAFSEDSP---FVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 434 ~~~~~~-------~~~~~~~~~~~~v~~~~~spd~~---~llasg~~dg~i~vwd~~~ 481 (502)
+..... ........|.+.|.+++|+|++. . |++.|.+|.+.+|++..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~-l~a~g~~g~~~~~~~~~ 419 (420)
T 3vl1_A 363 ISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGE-VLEVGKNNFCALYNLSN 419 (420)
T ss_dssp ECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCE-EEEEETTTEEEEEESCC
T ss_pred ccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcce-EEEEcCCceEEEEeccC
Confidence 877321 01223456788999999999998 6 44566789999999864
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=8.5e-32 Score=258.07 Aligned_cols=281 Identities=20% Similarity=0.341 Sum_probs=217.7
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcE
Q 010769 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAI 221 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I 221 (502)
.+.|.|+|++ +||+|. ++ +++||....+.. ..+...| .......|+.| +|++++||+|+.||.|
T Consensus 28 ~~~l~WS~~~-~lAvg~-D~---tV~iWd~~tg~~--~~~~~~~--~~~~~V~~v~~-------~~~~~~l~sgs~Dg~v 91 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVAL-DN---SVYLWSASSGDI--LQLLQME--QPGEYISSVAW-------IKEGNYLAVGTSSAEV 91 (318)
T ss_dssp CBCEEECTTS-EEEEEE-TT---EEEEEETTTCCE--EEEEECC--STTCCEEEEEE-------CTTSSEEEEEETTSEE
T ss_pred ceEEEECCCC-EEEEEe-CC---EEEEEECCCCCE--EEEEEec--CCCCeEEEEEE-------CCCCCEEEEEECCCcE
Confidence 5779999886 677664 54 455555443321 1111111 11223467777 7999999999999999
Q ss_pred EEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC-e
Q 010769 222 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG-K 300 (502)
Q Consensus 222 ~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~-~ 300 (502)
+||++.++. ....+.+|...+.++++.+ .+|++|+.++.+++|+.... .
T Consensus 92 ~iw~~~~~~---------------------------~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~ 141 (318)
T 4ggc_A 92 QLWDVQQQK---------------------------RLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH 141 (318)
T ss_dssp EEEETTTTE---------------------------EEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC
T ss_pred EEeecCCce---------------------------eEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce
Confidence 999997532 2234457888888877764 48999999999999998876 4
Q ss_pred eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc----ceEeecCCeEEEEeCCCCCCEEE--EEeCC
Q 010769 301 CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFV--VSLED 374 (502)
Q Consensus 301 ~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~----~~~~~~~~v~~v~~~p~~~~~l~--~~~~d 374 (502)
.+..+.+|...+.++.|++.+ .+|++++.||.|++||+++++... ....+.+.|.++.++|.+..++. +++.+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 220 (318)
T 4ggc_A 142 HVATLSGHSQEVCGLRWAPDG-RHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSD 220 (318)
T ss_dssp EEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTT
T ss_pred eEEEEcCccCceEEEEEcCCC-CEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCC
Confidence 567788999999999999999 899999999999999998765432 23345678999999998877654 45678
Q ss_pred CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE--eCCCcEEEEECCCCCeeEEEEecCCCCCE
Q 010769 375 GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 375 g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~--s~dg~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
+.|++||.+.. .......+...+..+.|+|.+ ..++++ +.|+.|++||+++++ ++..+.+|.+.|
T Consensus 221 ~~i~lwd~~~~----------~~~~~~~~~~~v~~~~~~~~~-~~~~~~sg~~d~~i~iwd~~~~~--~~~~l~gH~~~V 287 (318)
T 4ggc_A 221 RHIRIWNVCSG----------ACLSAVDAHSQVCSILWSPHY-KELISGHGFAQNQLVIWKYPTMA--KVAELKGHTSRV 287 (318)
T ss_dssp CEEEEEETTTC----------CEEEEEECSSCEEEEEEETTT-TEEEEEECTTTCCEEEEETTTCC--EEEEECCCSSCE
T ss_pred CEEEEEecccc----------cccccccceeeeeeeeecccc-cceEEEEEcCCCEEEEEECCCCc--EEEEEcCCCCCE
Confidence 99999999875 234445677889999999998 555544 479999999999988 577888999999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 453 ~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++++|+|++++ |++|+.||+|+|||+....
T Consensus 288 ~~l~~spdg~~-l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 288 LSLTMSPDGAT-VASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEEEECTTSSC-EEEEETTTEEEEECCSCCC
T ss_pred EEEEEcCCCCE-EEEEecCCeEEEEECCCCC
Confidence 99999999995 9999999999999997643
No 66
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=6.6e-33 Score=268.81 Aligned_cols=285 Identities=16% Similarity=0.212 Sum_probs=227.1
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCC-EEEEe
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGN-FMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~-~la~g 215 (502)
.|.+.|.+++|+|++++|++|+.++ .+.||.+..... ...............|+.| +|+++ +|++|
T Consensus 9 ~h~~~v~~~~~s~~~~~l~~~~~d~---~v~iw~~~~~~~---~~~~~~~~~~~~~v~~~~~-------~~~~~~~l~~~ 75 (342)
T 1yfq_A 9 APKDYISDIKIIPSKSLLLITSWDG---SLTVYKFDIQAK---NVDLLQSLRYKHPLLCCNF-------IDNTDLQIYVG 75 (342)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTS---EEEEEEEETTTT---EEEEEEEEECSSCEEEEEE-------EESSSEEEEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCC---eEEEEEeCCCCc---cccceeeeecCCceEEEEE-------CCCCCcEEEEE
Confidence 4888999999999999999999886 667777765542 1111111122344578888 67899 99999
Q ss_pred cCCCcEEEeeC-CCCCCCCceeeeCCcchhhhhhccccCCccccccccCC--cccceeeEEecCCCCcEEEEEecCCcEE
Q 010769 216 SMEPAIEIWDL-DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS--HTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 216 ~~dg~I~iwdl-~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~V~~l~~~~~~~~~l~sgs~Dg~v~ 292 (502)
+.+|.|++|++ ..... ..+.+ |...|.+++|+| +.+|++++.|+.|+
T Consensus 76 ~~dg~i~~wd~~~~~~~----------------------------~~~~~~~~~~~v~~l~~~~--~~~l~s~~~d~~i~ 125 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF----------------------------QALTNNEANLGICRICKYG--DDKLIAASWDGLIE 125 (342)
T ss_dssp ETTSCEEEECSSSSSSE----------------------------EECBSCCCCSCEEEEEEET--TTEEEEEETTSEEE
T ss_pred cCCCeEEEEEeccCCce----------------------------EeccccCCCCceEEEEeCC--CCEEEEEcCCCeEE
Confidence 99999999998 64211 23446 999999999999 45999999999999
Q ss_pred EEECCC---------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC-CCCcc--ceEeecCCeEEEEe
Q 010769 293 IWDVAA---------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSG--FKWAVAADVESLAW 360 (502)
Q Consensus 293 vwd~~~---------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~--~~~~~~~~v~~v~~ 360 (502)
+||+.+ ++++..+. |...|.+++|+|++ +++++.++.|++||++. ..... ....+...+.+++|
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~ 201 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVAL 201 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEE
T ss_pred EEcccccccccccccCCeeeEEe-eCCceEEEEecCCc---EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEE
Confidence 999988 77777777 89999999999865 99999999999999998 54322 23356778999999
Q ss_pred CC-CCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC---------CeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 361 DP-HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---------AVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 361 ~p-~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
+| ++. ++++++.+|.|++|+++...... .......+..|.. .|.+++|+|++ .+|++++.||.|+
T Consensus 202 ~~~~~~-~l~~~~~dg~i~i~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~ 276 (342)
T 1yfq_A 202 LPKEQE-GYACSSIDGRVAVEFFDDQGDDY---NSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIIS 276 (342)
T ss_dssp CSGGGC-EEEEEETTSEEEEEECCTTCCST---TCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEE
T ss_pred CCCCCC-EEEEEecCCcEEEEEEcCCCccc---ccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEE
Confidence 99 765 89999999999999998651000 0155667777755 99999999998 8999999999999
Q ss_pred EEECCCCCeeEEEEecCC-CCCEEEEEEcCCCCcEEEEEeCCCc-EEEEE
Q 010769 431 LWDLSNNQPSCIASRNPK-AGAVFSVAFSEDSPFVLAIGGSKGK-LEIWD 478 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~-~~~v~~~~~spd~~~llasg~~dg~-i~vwd 478 (502)
+||+.+++ .+..+..| .+.|.+++ |++. +|++|+.||. .+.|.
T Consensus 277 vwd~~~~~--~~~~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 277 CWNLQTRK--KIKNFAKFNEDSVVKIA--CSDN-ILCLATSDDTFKTNAA 321 (342)
T ss_dssp EEETTTTE--EEEECCCCSSSEEEEEE--ECSS-EEEEEEECTHHHHCSS
T ss_pred EEcCccHh--HhhhhhcccCCCceEec--CCCC-eEEEEecCCccccccc
Confidence 99999887 56677887 99999999 9998 5999999998 44444
No 67
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.9e-33 Score=281.29 Aligned_cols=257 Identities=16% Similarity=0.202 Sum_probs=199.5
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
..|++| +| ++++||+|+.||.|+|||+...+. .....+.+|.+.|++
T Consensus 122 V~~l~~-------~P~~~~~lasGs~dg~i~lWd~~~~~~-------------------------~~~~~~~gH~~~V~~ 169 (435)
T 4e54_B 122 ATSLAW-------HPTHPSTVAVGSKGGDIMLWNFGIKDK-------------------------PTFIKGIGAGGSITG 169 (435)
T ss_dssp EEEEEE-------CSSCTTCEEEEETTSCEEEECSSCCSC-------------------------CEEECCCSSSCCCCE
T ss_pred EEEEEE-------eCCCCCEEEEEeCCCEEEEEECCCCCc-------------------------eeEEEccCCCCCEEE
Confidence 478888 66 578999999999999999975322 122345589999999
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc--CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 349 (502)
|+|+|.++++|+||+.||+|++||+.++........ +...+.+++|+|++ .+|++|+.||.|++||++... .....
T Consensus 170 l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~~-~~~~~ 247 (435)
T 4e54_B 170 LKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGKE-LWNLR 247 (435)
T ss_dssp EEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSCB-CCCSB
T ss_pred EEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcce-eEEEe
Confidence 999996578999999999999999987655443333 34567899999999 899999999999999997644 33456
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
.|...|.+++|+|++..++++|+.|+.|++||+++... ........+|...|++++|+|++ .+|++++.||.|
T Consensus 248 ~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~------~~~~~~~~~h~~~v~~~~~spdg-~~l~s~~~D~~i 320 (435)
T 4e54_B 248 MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG------KASFLYSLPHRHPVNAACFSPDG-ARLLTTDQKSEI 320 (435)
T ss_dssp CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS------SSCCSBCCBCSSCEEECCBCTTS-SEEEEEESSSCE
T ss_pred cccceEEeeeecCCCceEEEEecCcceeeEEecccccc------cceEEEeeeccccccceeECCCC-CeeEEEcCCCEE
Confidence 78899999999999888999999999999999998632 12333446799999999999998 899999999999
Q ss_pred EEEECCCCCeeEEEEecCCCC------CEEEEEEcCCCCcEEEEEe------------CCCcEEEEECCCCccccccccC
Q 010769 430 KLWDLSNNQPSCIASRNPKAG------AVFSVAFSEDSPFVLAIGG------------SKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~------~v~~~~~spd~~~llasg~------------~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+|||+.++.. ...+..|.. .+..+.|+|++.+ +++++ .++.|++||+.+++.+..++..
T Consensus 321 ~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~ 397 (435)
T 4e54_B 321 RVYSASQWDC--PLGLIPHPHRHFQHLTPIKAAWHPRYNL-IVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDP 397 (435)
T ss_dssp EEEESSSSSS--EEEECCCCCCCCSSSCCCBCEECSSSSC-EEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCS
T ss_pred EEEECCCCcc--ceEEecccccccccceeEEEEEcCCCCE-EEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCC
Confidence 9999998763 333333221 2334556666653 33332 3467999999999988877654
Q ss_pred CC
Q 010769 492 YS 493 (502)
Q Consensus 492 ~~ 493 (502)
+.
T Consensus 398 ~~ 399 (435)
T 4e54_B 398 ES 399 (435)
T ss_dssp SC
T ss_pred CC
Confidence 33
No 68
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.4e-32 Score=292.71 Aligned_cols=250 Identities=22% Similarity=0.315 Sum_probs=207.7
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +++ +++|++|+.|++|+||++....... ......+.+|...|.++
T Consensus 386 ~~v~~-------~~~~~~~l~s~s~D~~i~~W~~~~~~~~~----------------------~~~~~~~~~h~~~v~~v 436 (694)
T 3dm0_A 386 TAIAT-------PIDNADIIVSASRDKSIILWKLTKDDKAY----------------------GVAQRRLTGHSHFVEDV 436 (694)
T ss_dssp EEEEC-------CTTCCSEEEEEETTSEEEEEECCCSTTCS----------------------CEEEEEEECCSSCEEEE
T ss_pred EEEEe-------cCCCCCEEEEEeCCCcEEEEEccCCCccc----------------------ccccceecCCCCcEEEE
Confidence 67766 554 6899999999999999997532211 12223456899999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc---eE
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KW 349 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---~~ 349 (502)
+|+|+ +.+|++|+.||+|+|||+.+++++..+.+|...|.+++|+|++ .+|++|+.|++|++||+........ ..
T Consensus 437 ~~s~~-g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~ 514 (694)
T 3dm0_A 437 VLSSD-GQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECKYTISEGGE 514 (694)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSTT
T ss_pred EECCC-CCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcceeeccCCC
Confidence 99999 5699999999999999999999999999999999999999999 8899999999999999865432211 12
Q ss_pred eecCCeEEEEeCCCCC-CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCc
Q 010769 350 AVAADVESLAWDPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM 428 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~ 428 (502)
.|...|.+++|+|++. ..+++++.||.|++||+++. .....+.+|...|++++|+|++ .+|++|+.||+
T Consensus 515 ~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~---------~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~ 584 (694)
T 3dm0_A 515 GHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNC---------KLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGV 584 (694)
T ss_dssp SCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTC---------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSB
T ss_pred CCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCC---------cEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCe
Confidence 4667899999999763 47999999999999999976 6778889999999999999998 99999999999
Q ss_pred EEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 429 VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 429 i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
|++||+++++ .+..+.. ...|.+++|+|++. +|+++ .++.|+|||+.++..+....
T Consensus 585 i~iwd~~~~~--~~~~~~~-~~~v~~~~~sp~~~-~l~~~-~~~~i~iwd~~~~~~~~~~~ 640 (694)
T 3dm0_A 585 VLLWDLAEGK--KLYSLEA-NSVIHALCFSPNRY-WLCAA-TEHGIKIWDLESKSIVEDLK 640 (694)
T ss_dssp CEEEETTTTE--EEECCBC-SSCEEEEEECSSSS-EEEEE-ETTEEEEEETTTTEEEEEEC
T ss_pred EEEEECCCCc--eEEEecC-CCcEEEEEEcCCCc-EEEEE-cCCCEEEEECCCCCChhhhc
Confidence 9999999887 4445443 46799999999987 46555 46679999999988776543
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=1.5e-32 Score=273.13 Aligned_cols=295 Identities=18% Similarity=0.281 Sum_probs=224.5
Q ss_pred ccccccccCCCceEEE-EEecCCcceeEEEEEecCCC---CCCceeeeeccccCCCcceeeeecCCCCCCC-CCCEEEEe
Q 010769 141 DLEDMTINPNDAVIVC-ARNEDDVSHLEVYILEESDG---GDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVG 215 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~-~~~~~~~~~l~v~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~-~~~~la~g 215 (502)
....+.++|+...+++ ++.++ .+.||.+..... ....+..|. ....+++| +| ++++||+|
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g---~i~v~~~~~~~~~~~~~~~~~~h~-----~~V~~~~~-------~p~~~~~l~s~ 100 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGG---AFLVLPLGKTGRVDKNVPLVCGHT-----APVLDIAW-------CPHNDNVIASG 100 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSC---CEEEEETTCCEECCTTCCCBCCCS-----SCEEEEEE-------CTTCTTEEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCC---EEEEEECccCCCCCCCCceEecCC-----CCEEEEEe-------CCCCCCEEEEE
Confidence 4456888888876665 45555 466666643321 011222232 22378888 67 89999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.||.|+||++........ .......+.+|...|.+++|+|++.++|++|+.||+|++||
T Consensus 101 s~dg~v~vw~~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 160 (402)
T 2aq5_A 101 SEDCTVMVWEIPDGGLVLP--------------------LREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWD 160 (402)
T ss_dssp ETTSEEEEEECCTTCCSSC--------------------BCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEE
T ss_pred eCCCeEEEEEccCCCCccc--------------------cCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEE
Confidence 9999999999976432211 01233455689999999999999667999999999999999
Q ss_pred CCCCeeeEEe--ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce-EeecCC-eEEEEeCCCCCCEEEEE
Q 010769 296 VAAGKCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WAVAAD-VESLAWDPHAEHSFVVS 371 (502)
Q Consensus 296 ~~~~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~~~-v~~v~~~p~~~~~l~~~ 371 (502)
+.+++++..+ ..|...|++++|+|++ .+|++++.||.|++||++++...... ..+.+. +.++.|+|++. ++++|
T Consensus 161 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~g 238 (402)
T 2aq5_A 161 VGTGAAVLTLGPDVHPDTIYSVDWSRDG-ALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGK-ILTTG 238 (402)
T ss_dssp TTTTEEEEEECTTTCCSCEEEEEECTTS-SCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTE-EEEEE
T ss_pred CCCCCccEEEecCCCCCceEEEEECCCC-CEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCc-EEEEe
Confidence 9999999999 8899999999999998 89999999999999999987766544 345554 89999999864 78888
Q ss_pred ---eCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEE-EEEeCCCcEEEEECCCCCe-eEEEEe
Q 010769 372 ---LEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL-ATGSTDKMVKLWDLSNNQP-SCIASR 445 (502)
Q Consensus 372 ---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l-~t~s~dg~i~vwd~~~~~~-~~~~~~ 445 (502)
+.++.|++||+++.. .++... ..|...+.+++|+|++ .+| ++|+.|+.|++|++.++++ ......
T Consensus 239 ~~~~~d~~i~iwd~~~~~--------~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~ 309 (402)
T 2aq5_A 239 FSRMSERQVALWDTKHLE--------EPLSLQELDTSSGVLLPFFDPDT-NIVYLCGKGDSSIRYFEITSEAPFLHYLSM 309 (402)
T ss_dssp ECTTCCEEEEEEETTBCS--------SCSEEEECCCCSSCEEEEEETTT-TEEEEEETTCSCEEEEEECSSTTCEEEEEE
T ss_pred ccCCCCceEEEEcCcccc--------CCceEEeccCCCceeEEEEcCCC-CEEEEEEcCCCeEEEEEecCCCcceEeecc
Confidence 789999999999862 333333 3577889999999998 555 5666899999999998873 222222
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 446 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
..|.+.|.+++|+|++.+ ++ +.++.+++|++.++..
T Consensus 310 ~~~~~~v~~~~~sp~~~~-~~--s~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 310 FSSKESQRGMGYMPKRGL-EV--NKCEIARFYKLHERKC 345 (402)
T ss_dssp ECCSSCCSEEEECCGGGS-CG--GGTEEEEEEEEETTEE
T ss_pred cccCCcccceEEeccccc-ce--ecceeEEEEEcCCCcE
Confidence 336789999999999985 54 3566999999988654
No 70
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.8e-32 Score=261.05 Aligned_cols=255 Identities=16% Similarity=0.221 Sum_probs=196.7
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCC--CCCEEE
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE--KGNFMA 213 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~--~~~~la 213 (502)
..|.+.|.+++|+|++++||+|+.++ .++||.+..........+..|.. ...+++| ++ ++++||
T Consensus 6 ~~h~~~V~~~~~s~~g~~las~s~D~---~v~iw~~~~~~~~~~~~l~gH~~----~V~~v~~-------s~~~~g~~l~ 71 (297)
T 2pm7_B 6 NAHNEMIHDAVMDYYGKRMATCSSDK---TIKIFEVEGETHKLIDTLTGHEG----PVWRVDW-------AHPKFGTILA 71 (297)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTS---CEEEEEBCSSCBCCCEEECCCSS----CEEEEEE-------CCGGGCSEEE
T ss_pred cCCcCceEEEEECCCCCEEEEEeCCC---EEEEEecCCCCcEEEEEEccccC----CeEEEEe-------cCCCcCCEEE
Confidence 34888999999999999999999887 56777775432211122222322 2367777 43 489999
Q ss_pred EecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC-CcEEEEEecCCcEE
Q 010769 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~Dg~v~ 292 (502)
+|+.|++|+|||+..... .....+.+|...|.+++|+|+. +.+|++|+.|++|+
T Consensus 72 s~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~ 126 (297)
T 2pm7_B 72 SCSYDGKVMIWKEENGRW-------------------------SQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVS 126 (297)
T ss_dssp EEETTTEEEEEEBSSSCB-------------------------CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEcCCCEEEEEEcCCCce-------------------------EEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEE
Confidence 999999999999874321 1122345799999999999972 46999999999999
Q ss_pred EEECCCCe--eeEEeccCCCCeEEEEEcCCC------------CcEEEEEECCCcEEEEeCCCCCC----ccceEeecCC
Q 010769 293 IWDVAAGK--CNLTLEHHTDKVQAVAWNHHS------------PQILLSGSFDRSVVMKDARISTH----SGFKWAVAAD 354 (502)
Q Consensus 293 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~~------------~~~l~s~~~dg~i~vwd~~~~~~----~~~~~~~~~~ 354 (502)
+||+.++. ....+.+|...|.+++|+|.+ ..+|++|+.|++|++||++.... ...+..|...
T Consensus 127 ~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp EEEBCSSSCBCCEEEECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEecCCCceeeeeeecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCc
Confidence 99998763 245677899999999999973 26899999999999999987652 2234467889
Q ss_pred eEEEEeCCCC--CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE--ecCCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 355 VESLAWDPHA--EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL--HAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 355 v~~v~~~p~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|.+++|+|++ ..+|++++.|++|++||++.... ......+ ..|...|.+++|+|++ .+|++++.|+.|+
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~------~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~ 279 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQG------PWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVT 279 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTS------CCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEE
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCC------ccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEE
Confidence 9999999985 46899999999999999986421 0111222 4678899999999998 8999999999999
Q ss_pred EEECCC
Q 010769 431 LWDLSN 436 (502)
Q Consensus 431 vwd~~~ 436 (502)
||+...
T Consensus 280 lw~~~~ 285 (297)
T 2pm7_B 280 LWKENL 285 (297)
T ss_dssp EEEECT
T ss_pred EEEECC
Confidence 999764
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=3.3e-32 Score=275.78 Aligned_cols=286 Identities=16% Similarity=0.245 Sum_probs=225.3
Q ss_pred Ccccc-ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 138 DSEDL-EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 138 ~~~~v-~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
|...+ .++. +++++|++|+.++ .+++|....... ...+..| .....|+.| ++++ +|++|+
T Consensus 120 h~~~v~~~~~--~~~~~l~sgs~dg---~i~vwd~~~~~~--~~~~~~h----~~~V~~l~~-------~~~~-~l~s~s 180 (464)
T 3v7d_B 120 HMTSVITCLQ--FEDNYVITGADDK---MIRVYDSINKKF--LLQLSGH----DGGVWALKY-------AHGG-ILVSGS 180 (464)
T ss_dssp CSSSCEEEEE--EETTEEEEEETTS---CEEEEETTTTEE--EEEECCC----SSCEEEEEE-------CSTT-EEEEEE
T ss_pred CCCCcEEEEE--ECCCEEEEEcCCC---cEEEEECCCCcE--EEEEeCC----CcCEEEEEE-------cCCC-EEEEEe
Confidence 55554 5444 4678999999887 456665433321 1111122 233477777 5666 999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCC-CCcEEEEEecCCcEEEEE
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNILASASADKQVKIWD 295 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~l~sgs~Dg~v~vwd 295 (502)
.||.|++||+.++. ....+.+|...|.+++|++. .+.+|++|+.||+|++||
T Consensus 181 ~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd 233 (464)
T 3v7d_B 181 TDRTVRVWDIKKGC---------------------------CTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWK 233 (464)
T ss_dssp TTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEE
T ss_pred CCCCEEEEECCCCc---------------------------EEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEee
Confidence 99999999997532 22345579999999999852 257999999999999999
Q ss_pred CCCCee-----------------------eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec
Q 010769 296 VAAGKC-----------------------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 296 ~~~~~~-----------------------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 352 (502)
+.++.. +..+.+|...|.++. +++ .+|++|+.||.|++||+++.+.......|.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~ 310 (464)
T 3v7d_B 234 LPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMKCLYILSGHT 310 (464)
T ss_dssp CCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred CCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCcEEEEecCCC
Confidence 987652 556788999998885 445 789999999999999999888776666788
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
..|.+++|+|++. .+++|+.||.|++||++++ .++..+.+|...|.+++|++ .+|++++.||.|++|
T Consensus 311 ~~v~~~~~~~~~~-~l~sg~~dg~i~vwd~~~~---------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vw 377 (464)
T 3v7d_B 311 DRIYSTIYDHERK-RCISASMDTTIRIWDLENG---------ELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGW 377 (464)
T ss_dssp SCEEEEEEETTTT-EEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEE
T ss_pred CCEEEEEEcCCCC-EEEEEeCCCcEEEEECCCC---------cEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEE
Confidence 9999999999866 8999999999999999986 78889999999999999984 799999999999999
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
|+.+... .... .+...+..++|+|++. +|++|+ +|.|++||+.+++.+...+.
T Consensus 378 d~~~~~~--~~~~-~~~~~~~~~~~~~~~~-~l~~~~-dg~i~iwd~~~g~~~~~~~~ 430 (464)
T 3v7d_B 378 DANDYSR--KFSY-HHTNLSAITTFYVSDN-ILVSGS-ENQFNIYNLRSGKLVHANIL 430 (464)
T ss_dssp ETTTCCE--EEEE-ECTTCCCEEEEEECSS-EEEEEE-TTEEEEEETTTCCEEESCTT
T ss_pred ECCCCce--eeee-cCCCCccEEEEEeCCC-EEEEec-CCeEEEEECCCCcEEehhhc
Confidence 9998763 2222 2556678889999998 577777 89999999999998876443
No 72
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.3e-32 Score=309.75 Aligned_cols=294 Identities=17% Similarity=0.288 Sum_probs=235.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..|...|.+++|+|++++|++|+.++ .+.||....... ...+.. | .....|++| +|++++||+|
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~---~i~vw~~~~~~~-~~~~~~-h----~~~v~~~~~-------s~~~~~l~s~ 675 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADK---TLQVFKAETGEK-LLDIKA-H----EDEVLCCAF-------SSDDSYIATC 675 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEETTTCCE-EEEECC-C----SSCEEEEEE-------CTTSSEEEEE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCC---eEEEEECCCCCE-EEEecc-C----CCCEEEEEE-------ecCCCEEEEE
Confidence 35889999999999999999999887 456665544321 001112 2 223367777 7999999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCC-CCcEEEEEecCCcEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKE-FRNILASASADKQVKIW 294 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~-~~~~l~sgs~Dg~v~vw 294 (502)
+.||.|+|||+.++. ....+.+|...|.+++|+|+ ...++++|+.|++|++|
T Consensus 676 ~~d~~v~vwd~~~~~---------------------------~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vw 728 (1249)
T 3sfz_A 676 SADKKVKIWDSATGK---------------------------LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLW 728 (1249)
T ss_dssp ETTSEEEEEETTTCC---------------------------EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEE
T ss_pred eCCCeEEEEECCCCc---------------------------eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEE
Confidence 999999999997532 22344579999999999995 25589999999999999
Q ss_pred ECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce--------------------------
Q 010769 295 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-------------------------- 348 (502)
Q Consensus 295 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-------------------------- 348 (502)
|+.+++++..+.+|...|++++|+|++ .+|++++.||.|++||+++.......
T Consensus 729 d~~~~~~~~~~~~h~~~v~~~~~sp~~-~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 807 (1249)
T 3sfz_A 729 DLNQKECRNTMFGHTNSVNHCRFSPDD-ELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWS 807 (1249)
T ss_dssp ETTSSSEEEEECCCSSCEEEEEECSST-TEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBC
T ss_pred ECCCcchhheecCCCCCEEEEEEecCC-CEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEEC
Confidence 999999999999999999999999998 89999999999999998765321100
Q ss_pred -----------------------------EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEE
Q 010769 349 -----------------------------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 349 -----------------------------~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
..+...+.+++|+|++. ++++++.+|.|++|++.+. ..+..
T Consensus 808 ~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~l~~~~~dg~v~vwd~~~~---------~~~~~ 877 (1249)
T 3sfz_A 808 ADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDH-LAVIALSQYCVELWNIDSR---------LKVAD 877 (1249)
T ss_dssp TTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSSTT-EEEEECSSSCEEEEETTTT---------EEEEE
T ss_pred CCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCCC-EEEEEeCCCeEEEEEcCCC---------ceeee
Confidence 03456788999999865 8999999999999999876 67788
Q ss_pred EecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC------------------------------------------
Q 010769 400 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN------------------------------------------ 437 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~------------------------------------------ 437 (502)
+.+|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 878 ~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 956 (1249)
T 3sfz_A 878 CRGHLSWVHGVMFSPDG-SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI 956 (1249)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE
T ss_pred cCCCccceEEEEECCCC-CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE
Confidence 88999999999999987 88999999999999985320
Q ss_pred -----------------------------------CeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 438 -----------------------------------QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 438 -----------------------------------~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.........+|.+.|++++|+|++++ |++++.||.|++|++.++
T Consensus 957 ~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~-l~s~~~dg~i~vwd~~~~ 1035 (1249)
T 3sfz_A 957 DYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKT-LISSSEDSVIQVWNWQTG 1035 (1249)
T ss_dssp EEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSC-EEEECSSSBEEEEETTTT
T ss_pred EEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCE-EEEEcCCCEEEEEECCCC
Confidence 00123344578889999999999995 889999999999999988
Q ss_pred ccc
Q 010769 483 AGI 485 (502)
Q Consensus 483 ~~~ 485 (502)
..+
T Consensus 1036 ~~~ 1038 (1249)
T 3sfz_A 1036 DYV 1038 (1249)
T ss_dssp EEE
T ss_pred ceE
Confidence 765
No 73
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-33 Score=286.07 Aligned_cols=238 Identities=12% Similarity=0.135 Sum_probs=184.6
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC-----CcE
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-----RNI 281 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-----~~~ 281 (502)
|++++||+|+.|++|+||++....... .....+.+|.+.|++|+|+|.+ +.+
T Consensus 171 ~~~~~laS~s~D~tI~iWd~~~~~~~~-----------------------~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~ 227 (524)
T 2j04_B 171 EHLEMFDKEKHSSCIQIFKMNTSTLHC-----------------------VKVQTIVHSFGEVWDLKWHEGCHAPHLVGC 227 (524)
T ss_dssp -----------CEEEEEEEEETTTCCE-----------------------EEEEEEEECCCSEEEEEECSSCCCSSSSCE
T ss_pred hhhhhhccCCCCceEEEEEccCCCCCc-----------------------eEEEEEEecCCcEEEEEECCCCCCCCCCce
Confidence 444555667788999999986533210 0111234678899999999962 469
Q ss_pred EEEEecCCcEEEEECCCCee-----------eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceE
Q 010769 282 LASASADKQVKIWDVAAGKC-----------NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKW 349 (502)
Q Consensus 282 l~sgs~Dg~v~vwd~~~~~~-----------~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~ 349 (502)
||+|+.||+|+|||+.++.. ...+.+|...|++++|++.+ .|++|+.||+|++||++++.... ...
T Consensus 228 LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~--~lasgs~DgtV~lWD~~~~~~~~~~~~ 305 (524)
T 2j04_B 228 LSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT--TVVCGFKNGFVAEFDLTDPEVPSFYDQ 305 (524)
T ss_dssp EEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS--EEEEEETTSEEEEEETTBCSSCSEEEE
T ss_pred EEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC--eEEEEeCCCEEEEEECCCCCCceEEee
Confidence 99999999999999987642 24678899999999999854 79999999999999999765433 355
Q ss_pred eecCCeEEE--EeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC--CeeEEEEcCCCCCEEEEEeC
Q 010769 350 AVAADVESL--AWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 350 ~~~~~v~~v--~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~l~t~s~ 425 (502)
.|...|.+| +|+|++..+|++++.||+|++||+++. .++..+.+|.. .|.+++|+|++ ..|++++.
T Consensus 306 ~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~---------~~~~~~~~~~~~~~v~~v~fsp~~-~~l~s~~~ 375 (524)
T 2j04_B 306 VHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDI---------ATTKTTVSRFRGSNLVPVVYCPQI-YSYIYSDG 375 (524)
T ss_dssp CSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGH---------HHHCEEEEECSCCSCCCEEEETTT-TEEEEECS
T ss_pred cccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCC---------CcccccccccccCcccceEeCCCc-CeEEEeCC
Confidence 788999999 567765468999999999999999976 55556666653 58899999998 78999999
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
|++|++||++++. ++..+.+|.+.|++++|+|++++ |++|+.||+|++||+...
T Consensus 376 d~tv~lwd~~~~~--~~~~l~gH~~~V~sva~Sp~g~~-l~Sgs~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 376 ASSLRAVPSRAAF--AVHPLVSRETTITAIGVSRLHPM-VLAGSADGSLIITNAARR 429 (524)
T ss_dssp SSEEEEEETTCTT--CCEEEEECSSCEEEEECCSSCCB-CEEEETTTEEECCBSCSS
T ss_pred CCcEEEEECcccc--cceeeecCCCceEEEEeCCCCCe-EEEEECCCEEEEEechHh
Confidence 9999999999877 34556679999999999999994 899999999999998653
No 74
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=2.2e-32 Score=271.92 Aligned_cols=245 Identities=22% Similarity=0.303 Sum_probs=201.9
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+.. ++++|+.+|.|+||++...... ......+.+|...|++++|+|.++.+|++
T Consensus 43 ~~~~~~~~~~~~~~g~i~v~~~~~~~~~-----------------------~~~~~~~~~h~~~V~~~~~~p~~~~~l~s 99 (402)
T 2aq5_A 43 NPKFMALICEASGGGAFLVLPLGKTGRV-----------------------DKNVPLVCGHTAPVLDIAWCPHNDNVIAS 99 (402)
T ss_dssp CSSEEEEEBCCSSSCCEEEEETTCCEEC-----------------------CTTCCCBCCCSSCEEEEEECTTCTTEEEE
T ss_pred CCCeEEEEEEEcCCCEEEEEECccCCCC-----------------------CCCCceEecCCCCEEEEEeCCCCCCEEEE
Confidence 55543 4445889999999999642111 12223456899999999999933779999
Q ss_pred EecCCcEEEEECCCC-------eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce--EeecCCe
Q 010769 285 ASADKQVKIWDVAAG-------KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK--WAVAADV 355 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~--~~~~~~v 355 (502)
|+.||+|+||++.++ +++..+.+|...|.+++|+|++.++|++++.||.|++||+++++..... ..|...|
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v 179 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTI 179 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCE
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCce
Confidence 999999999999987 6678889999999999999998679999999999999999988766544 4578899
Q ss_pred EEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCC-eeEEEEcCCCCCEEEEE---eCCCcEE
Q 010769 356 ESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKA-VCTISYNPLVPNLLATG---STDKMVK 430 (502)
Q Consensus 356 ~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~-v~~l~~sp~~~~~l~t~---s~dg~i~ 430 (502)
.+++|+|++. +|++++.||.|++||+++. ..+..+ ..|.+. +.++.|+|++ .+|++| +.|+.|+
T Consensus 180 ~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~ 248 (402)
T 2aq5_A 180 YSVDWSRDGA-LICTSCRDKRVRVIEPRKG---------TVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVA 248 (402)
T ss_dssp EEEEECTTSS-CEEEEETTSEEEEEETTTT---------EEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEE
T ss_pred EEEEECCCCC-EEEEEecCCcEEEEeCCCC---------ceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEE
Confidence 9999999765 7999999999999999986 666777 688776 8999999997 889998 7899999
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
+||+++...........+...+.+++|+|++.+++++|+.||.|++|++.+++.
T Consensus 249 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 249 LWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp EEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred EEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 999998764222333356678999999999997556777899999999999885
No 75
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=2.4e-32 Score=274.65 Aligned_cols=280 Identities=21% Similarity=0.382 Sum_probs=219.6
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.+ ++++|++|+.++ .+.+|....... ...+..|. ....|+.| ++++|++|+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg---~i~iwd~~~~~~--~~~~~~h~----~~v~~l~~---------~~~~l~sg~ 190 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDN---TIKIWDKNTLEC--KRILTGHT----GSVLCLQY---------DERVIITGS 190 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSS---CEEEEESSSCCE--EEEECCCS----SCEEEEEC---------CSSEEEEEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCC---eEEEEeCCCCeE--EEEEcCCC----CcEEEEEE---------CCCEEEEEc
Confidence 45667877766 899999999887 456665543221 11122222 22356654 688999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.||.|+|||+.++.. ...+.+|...|.+++|++. +|++|+.||+|++||+
T Consensus 191 ~dg~i~vwd~~~~~~---------------------------~~~~~~h~~~v~~l~~~~~---~l~s~s~dg~i~vwd~ 240 (435)
T 1p22_A 191 SDSTVRVWDVNTGEM---------------------------LNTLIHHCEAVLHLRFNNG---MMVTCSKDRSIAVWDM 240 (435)
T ss_dssp TTSCEEEEESSSCCE---------------------------EEEECCCCSCEEEEECCTT---EEEEEETTSCEEEEEC
T ss_pred CCCeEEEEECCCCcE---------------------------EEEEcCCCCcEEEEEEcCC---EEEEeeCCCcEEEEeC
Confidence 999999999975322 2344579999999999754 8999999999999999
Q ss_pred CCCeee---EEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeC
Q 010769 297 AAGKCN---LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 297 ~~~~~~---~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 373 (502)
.++... ..+.+|...|.+++| ++ .+|++|+.||.|++||++++........+...+.++.|++ .++++|+.
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~--~~-~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~g~~ 314 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDF--DD-KYIVSASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRD---RLVVSGSS 314 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEE--ET-TEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEET---TEEEEEET
T ss_pred CCCCCceeeeEecCCCCcEEEEEe--CC-CEEEEEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCC---CEEEEEeC
Confidence 987655 677889999999999 44 7899999999999999999887776777889999999953 48999999
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe-------eEEEEec
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP-------SCIASRN 446 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~-------~~~~~~~ 446 (502)
||.|++||++++ .++..+.+|...|.+++|. + .+|++|+.||.|++||+.++.. .++..+.
T Consensus 315 dg~i~iwd~~~~---------~~~~~~~~h~~~v~~~~~~--~-~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 382 (435)
T 1p22_A 315 DNTIRLWDIECG---------ACLRVLEGHEELVRCIRFD--N-KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLV 382 (435)
T ss_dssp TSCEEEEETTTC---------CEEEEECCCSSCEEEEECC--S-SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEEC
T ss_pred CCeEEEEECCCC---------CEEEEEeCCcCcEEEEEec--C-CEEEEEeCCCcEEEEECCCCCCccccccchheeecc
Confidence 999999999986 7788899999999999993 3 8999999999999999865431 1577788
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 447 PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 447 ~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
.|.+.|++++| ++. .|++|+.||.|++||+.+......
T Consensus 383 ~h~~~v~~l~~--~~~-~l~s~s~Dg~i~iwd~~~~~~~~~ 420 (435)
T 1p22_A 383 EHSGRVFRLQF--DEF-QIVSSSHDDTILIWDFLNDPAAQA 420 (435)
T ss_dssp CCSSCCCCEEE--CSS-CEEECCSSSEEEEEC---------
T ss_pred CCCCCeEEEEe--CCC-EEEEEeCCCEEEEEECCCCCCccc
Confidence 99999999999 566 489999999999999988766543
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2e-33 Score=276.61 Aligned_cols=250 Identities=14% Similarity=0.157 Sum_probs=192.7
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|++++||+|+.|+.|+||++.... ......+.+|...|+++
T Consensus 14 v~~~~~-------s~~g~~l~~~~~d~~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v~~~ 61 (377)
T 3dwl_C 14 SYEHAF-------NSQRTEFVTTTATNQVELYEQDGNG-------------------------WKHARTFSDHDKIVTCV 61 (377)
T ss_dssp CSCCEE-------CSSSSEEECCCSSSCBCEEEEETTE-------------------------EEECCCBCCCSSCEEEE
T ss_pred EEEEEE-------CCCCCEEEEecCCCEEEEEEccCCc-------------------------eEEEEEEecCCceEEEE
Confidence 367777 7999999999999999999986421 12333456899999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCe---eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC---cc
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGK---CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH---SG 346 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~---~~ 346 (502)
+|+|+ +++|++|+.|++|++||+.+++ +...+..|...|.+++|+|++ .+|++++.|+.|++||++.... ..
T Consensus 62 ~~s~~-~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~~~~ 139 (377)
T 3dwl_C 62 DWAPK-SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWWVSK 139 (377)
T ss_dssp EECTT-TCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CCCCE
T ss_pred EEeCC-CCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccceeee
Confidence 99999 5699999999999999999877 677788899999999999998 8999999999999999998763 33
Q ss_pred ceEe-ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCC---------CCCCccEEEecCCCCeeEEEEcCCC
Q 010769 347 FKWA-VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS---------TSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 347 ~~~~-~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---------~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
.... |...|.+++|+|++. ++++++.||.|++||++........ ....++..+ .|...|++++|+|++
T Consensus 140 ~~~~~h~~~v~~~~~~~~~~-~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~ 217 (377)
T 3dwl_C 140 HLKRPLRSTILSLDWHPNNV-LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSG 217 (377)
T ss_dssp EECSSCCSCEEEEEECTTSS-EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTS
T ss_pred EeecccCCCeEEEEEcCCCC-EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECCCC
Confidence 3334 788999999999765 8999999999999999743211100 001234444 899999999999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
.+|++++.|+.|++||+.+++. ..+..+..|...|.+++|+|++. +|++|+.++ +.+|+...
T Consensus 218 -~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~~~-~~~~~~~~ 281 (377)
T 3dwl_C 218 -NALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESA-IVAAGYNYS-PILLQGNE 281 (377)
T ss_dssp -SCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTE-EEEEESSSS-EEEECCCC
T ss_pred -CEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCC-EEEEEcCCc-EEEEEeCC
Confidence 8999999999999999998874 12566778999999999999998 477776655 45777653
No 77
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=292.21 Aligned_cols=169 Identities=14% Similarity=0.180 Sum_probs=128.6
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
|...|.+++|+| +++|++++.++ .++||.+.... .+..+. .+....|+.| +|++++|++|+.
T Consensus 57 ~~~~V~~l~fsp-g~~L~S~s~D~---~v~lWd~~~~~----~~~~~~---~~~~V~~v~~-------sp~g~~l~sgs~ 118 (902)
T 2oaj_A 57 DRSAIKEMRFVK-GIYLVVINAKD---TVYVLSLYSQK----VLTTVF---VPGKITSIDT-------DASLDWMLIGLQ 118 (902)
T ss_dssp SCCCEEEEEEET-TTEEEEEETTC---EEEEEETTTCS----EEEEEE---CSSCEEEEEC-------CTTCSEEEEEET
T ss_pred CCCCEEEEEEcC-CCEEEEEECcC---eEEEEECCCCc----EEEEEc---CCCCEEEEEE-------CCCCCEEEEEcC
Confidence 567899999999 88999998876 56666654432 222111 2233466666 899999999999
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccc-cccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIK-YKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
||.|++||+...... +..+ . ..... ..+.+|...|++|+|+|++..+|++|+.||+| +||+
T Consensus 119 dg~V~lwd~~~~~~~-~~~i-~---------------~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~ 180 (902)
T 2oaj_A 119 NGSMIVYDIDRDQLS-SFKL-D---------------NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSL 180 (902)
T ss_dssp TSCEEEEETTTTEEE-EEEE-C---------------CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEET
T ss_pred CCcEEEEECCCCccc-ccee-c---------------cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEEC
Confidence 999999999754321 1000 0 00000 23468999999999999756789999999999 9999
Q ss_pred CCCeeeEEeccC------------------CCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC
Q 010769 297 AAGKCNLTLEHH------------------TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 297 ~~~~~~~~~~~h------------------~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 343 (502)
.+++++..+..| ...|++++|+|++ .+|++|+.||+|++||+++++
T Consensus 181 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~ 244 (902)
T 2oaj_A 181 VENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGH 244 (902)
T ss_dssp TTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCC
T ss_pred CCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCc
Confidence 999998888765 5789999999998 899999999999999997654
No 78
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=4.7e-32 Score=265.89 Aligned_cols=248 Identities=17% Similarity=0.224 Sum_probs=204.9
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|+.| +|++++||+|+.++.|+||++.... ......+.+|...|.+++
T Consensus 12 ~~~~~-------s~~~~~l~~~~~d~~v~i~~~~~~~-------------------------~~~~~~~~~h~~~v~~~~ 59 (372)
T 1k8k_C 12 SCHAW-------NKDRTQIAICPNNHEVHIYEKSGNK-------------------------WVQVHELKEHNGQVTGVD 59 (372)
T ss_dssp CEEEE-------CTTSSEEEEECSSSEEEEEEEETTE-------------------------EEEEEEEECCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCEEEEEeCCCCc-------------------------EEeeeeecCCCCcccEEE
Confidence 67777 7899999999999999999986421 112334557999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc----cc
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS----GF 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~----~~ 347 (502)
|+|+ +.+|++|+.||.|++||+.+++.... +..|...|.+++|+|++ .+|++++.++.|++||++..... ..
T Consensus 60 ~~~~-~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~ 137 (372)
T 1k8k_C 60 WAPD-SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHI 137 (372)
T ss_dssp EETT-TTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEE
T ss_pred EeCC-CCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeee
Confidence 9998 56999999999999999998875444 46789999999999998 89999999999999999987642 11
Q ss_pred eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC---------CCCCCccEEEecCCCCeeEEEEcCCCCC
Q 010769 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD---------STSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~---------~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
...+...|.+++|+|++. ++++++.+|.|++||++....... ......+..+..|...|.+++|+|++ .
T Consensus 138 ~~~~~~~i~~~~~~~~~~-~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~ 215 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSV-LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-S 215 (372)
T ss_dssp CTTCCSCEEEEEECTTSS-EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-S
T ss_pred ecccCCCeeEEEEcCCCC-EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-C
Confidence 234578899999999765 899999999999999763211100 01136677778899999999999998 8
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+|++++.|+.|++||+++++ .+..+..|..+|.+++|+|++. +|++| .++.|++|++.+
T Consensus 216 ~l~~~~~d~~i~i~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 216 RVAWVSHDSTVCLADADKKM--AVATLASETLPLLAVTFITESS-LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEETTTEEEEEEGGGTT--EEEEEECSSCCEEEEEEEETTE-EEEEE-TTSSCEEEEEET
T ss_pred EEEEEeCCCEEEEEECCCCc--eeEEEccCCCCeEEEEEecCCC-EEEEE-eCCeEEEEEccC
Confidence 99999999999999999887 5666778888999999999998 46666 899999999988
No 79
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=5.1e-32 Score=268.31 Aligned_cols=250 Identities=15% Similarity=0.236 Sum_probs=209.3
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +| ++|++|+.||.|+||++.......+ ......+.+|...|++++
T Consensus 20 ~~~~~-------~~--~~l~s~~~dg~i~iw~~~~~~~~~~---------------------~~~~~~~~~h~~~v~~~~ 69 (397)
T 1sq9_A 20 FSVSA-------CN--SFTVSCSGDGYLKVWDNKLLDNENP---------------------KDKSYSHFVHKSGLHHVD 69 (397)
T ss_dssp EEEEE-------CS--SEEEEEETTSEEEEEESBCCTTCCG---------------------GGGEEEEECCTTCEEEEE
T ss_pred EEEEe-------cC--CeEEEEcCCCEEEEEECCCcccccC---------------------CCcceEEecCCCcEEEEE
Confidence 68888 45 8999999999999999976432211 223344558999999999
Q ss_pred ecCC---CC---cEEEEEecCCcEEEEECCCCee-----eEEeccC-----CCCeEEEEEc----CCCCcE-EEEEECCC
Q 010769 274 WNKE---FR---NILASASADKQVKIWDVAAGKC-----NLTLEHH-----TDKVQAVAWN----HHSPQI-LLSGSFDR 332 (502)
Q Consensus 274 ~~~~---~~---~~l~sgs~Dg~v~vwd~~~~~~-----~~~~~~h-----~~~v~~l~~~----~~~~~~-l~s~~~dg 332 (502)
|+|+ .+ .+|++|+.||.|++|++.+++. +..+..| ...|.+++|+ |++ .+ |++++.||
T Consensus 70 ~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg 148 (397)
T 1sq9_A 70 VLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKG 148 (397)
T ss_dssp EEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTS
T ss_pred EecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCC
Confidence 9998 23 5899999999999999998887 8888888 5999999999 988 77 99999999
Q ss_pred cEEEEeCCC------CCCcc-----ceE-------eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCC
Q 010769 333 SVVMKDARI------STHSG-----FKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQ 394 (502)
Q Consensus 333 ~i~vwd~~~------~~~~~-----~~~-------~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~ 394 (502)
.|++||++. ..... ... .+...+.+++|+|++ ++++++.+|.|++||+++.
T Consensus 149 ~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~~--------- 217 (397)
T 1sq9_A 149 TTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELSTL--------- 217 (397)
T ss_dssp CEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTTT---------
T ss_pred cEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCCC---------
Confidence 999999998 55443 332 257789999999986 8999999999999999986
Q ss_pred CccEEEec---C---CCCeeEEEEcCCCCCEEEEEeCC---CcEEEEECCCCCeeEEEEecC-------------CCCCE
Q 010769 395 QSSFTLHA---H---DKAVCTISYNPLVPNLLATGSTD---KMVKLWDLSNNQPSCIASRNP-------------KAGAV 452 (502)
Q Consensus 395 ~~~~~~~~---h---~~~v~~l~~sp~~~~~l~t~s~d---g~i~vwd~~~~~~~~~~~~~~-------------~~~~v 452 (502)
.++..+.. | ...|.+++|+|++ .+|++++.| +.|++||+++++ .+..+.. |...|
T Consensus 218 ~~~~~~~~~~~h~~~~~~i~~i~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v 294 (397)
T 1sq9_A 218 RPLYNFESQHSMINNSNSIRSVKFSPQG-SLLAIAHDSNSFGCITLYETEFGE--RIGSLSVPTHSSQASLGEFAHSSWV 294 (397)
T ss_dssp EEEEEEECCC---CCCCCEEEEEECSST-TEEEEEEEETTEEEEEEEETTTCC--EEEEECBC--------CCBSBSSCE
T ss_pred ceeEEEeccccccccCCccceEEECCCC-CEEEEEecCCCCceEEEEECCCCc--ccceeccCcccccccccccccCCcE
Confidence 67788888 9 9999999999998 899999999 999999999887 4555666 88999
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 453 ~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+++|+|+++ +|++++.||.|+|||+.+++.+....
T Consensus 295 ~~~~~~~~~~-~l~~~~~dg~i~iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 295 MSLSFNDSGE-TLCSAGWDGKLRFWDVKTKERITTLN 330 (397)
T ss_dssp EEEEECSSSS-EEEEEETTSEEEEEETTTTEEEEEEE
T ss_pred EEEEECCCCC-EEEEEeCCCeEEEEEcCCCceeEEEe
Confidence 9999999999 58999999999999999998877665
No 80
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.1e-32 Score=264.75 Aligned_cols=254 Identities=20% Similarity=0.265 Sum_probs=194.4
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCC-CCceeeeeccccCCCcceeeeecCCCCCCC--CCCEE
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGG-DPNLYVHHHIIIPAFPLCMAWLDCPLKDRE--KGNFM 212 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~--~~~~l 212 (502)
..|.+.|.+++|+|++++||+|+.++ .++||.+...... ...+..|. ....+++| ++ ++++|
T Consensus 10 ~~H~~~V~~v~~s~~g~~lasgs~D~---~v~lwd~~~~~~~~~~~l~gH~-----~~V~~v~~-------~~~~~~~~l 74 (316)
T 3bg1_A 10 TSHEDMIHDAQMDYYGTRLATCSSDR---SVKIFDVRNGGQILIADLRGHE-----GPVWQVAW-------AHPMYGNIL 74 (316)
T ss_dssp ----CCEEEEEECGGGCEEEEEETTT---EEEEEEEETTEEEEEEEEECCS-----SCEEEEEE-------CCGGGSSCE
T ss_pred ccccCeEEEeeEcCCCCEEEEEeCCC---eEEEEEecCCCcEEEEEEcCCC-----ccEEEEEe-------CCCCCCCEE
Confidence 45889999999999999999999887 6788877654210 00122232 23367777 43 48999
Q ss_pred EEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC-CcEEEEEecCCcE
Q 010769 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQV 291 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~Dg~v 291 (502)
|+|+.|++|+|||+..... .....+.+|...|++++|+|+. +.+|++|+.|++|
T Consensus 75 ~s~s~D~~v~iWd~~~~~~-------------------------~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i 129 (316)
T 3bg1_A 75 ASCSYDRKVIIWREENGTW-------------------------EKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI 129 (316)
T ss_dssp EEEETTSCEEEECCSSSCC-------------------------CEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE
T ss_pred EEEECCCEEEEEECCCCcc-------------------------eEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE
Confidence 9999999999999864211 1122345799999999999973 4689999999999
Q ss_pred EEEECCCCe---eeEEeccCCCCeEEEEEcCCC----------------CcEEEEEECCCcEEEEeCCCCC---CccceE
Q 010769 292 KIWDVAAGK---CNLTLEHHTDKVQAVAWNHHS----------------PQILLSGSFDRSVVMKDARIST---HSGFKW 349 (502)
Q Consensus 292 ~vwd~~~~~---~~~~~~~h~~~v~~l~~~~~~----------------~~~l~s~~~dg~i~vwd~~~~~---~~~~~~ 349 (502)
++|++..+. ....+.+|...|.+++|+|+. ..+|++|+.|++|++||++... ....+.
T Consensus 130 ~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~ 209 (316)
T 3bg1_A 130 SLLTYTGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE 209 (316)
T ss_dssp EEEEECSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB
T ss_pred EEEecCCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc
Confidence 999998763 245567899999999999973 2689999999999999997542 233345
Q ss_pred eecCCeEEEEeCCCC---CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 350 AVAADVESLAWDPHA---EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~---~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.|...|.+++|+|++ ..+|++++.||+|++|+++..... ......+..|...|.+++|+|++ .+|++++.|
T Consensus 210 ~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~-----~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D 283 (316)
T 3bg1_A 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSN-----TWSPKLLHKFNDVVWHVSWSITA-NILAVSGGD 283 (316)
T ss_dssp CCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCC-----CCBCCEEEECSSCEEEEEECTTT-CCEEEEESS
T ss_pred cCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCcccc-----chhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCC
Confidence 688899999999975 358999999999999999863110 11234456789999999999998 899999999
Q ss_pred CcEEEEECC
Q 010769 427 KMVKLWDLS 435 (502)
Q Consensus 427 g~i~vwd~~ 435 (502)
++|+||+..
T Consensus 284 ~~v~lw~~~ 292 (316)
T 3bg1_A 284 NKVTLWKES 292 (316)
T ss_dssp SCEEEEEEC
T ss_pred CeEEEEEEC
Confidence 999999975
No 81
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-31 Score=267.00 Aligned_cols=280 Identities=21% Similarity=0.350 Sum_probs=225.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|.+.|.. ++.+++++|++|+.++ .+.+|.+..... ...+..|. ....++.| ++++|++|+
T Consensus 116 ~h~~~v~~-~~~~~g~~l~sg~~dg---~i~vwd~~~~~~--~~~~~~h~----~~v~~~~~---------~~~~l~s~~ 176 (445)
T 2ovr_B 116 GHDDHVIT-CLQFCGNRIVSGSDDN---TLKVWSAVTGKC--LRTLVGHT----GGVWSSQM---------RDNIIISGS 176 (445)
T ss_dssp CSTTSCEE-EEEEETTEEEEEETTS---CEEEEETTTCCE--EEECCCCS----SCEEEEEE---------ETTEEEEEE
T ss_pred ccCCCcEE-EEEEcCCEEEEEECCC---cEEEEECCCCcE--EEEEcCCC----CCEEEEEe---------cCCEEEEEe
Confidence 36665533 4666799999999887 456665543321 11112222 22356665 377999999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.||.|++||+..+. ....+.+|...|.+++|++. .|++|+.||+|++||+
T Consensus 177 ~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~v~~~~~~~~---~l~s~s~dg~i~~wd~ 226 (445)
T 2ovr_B 177 TDRTLKVWNAETGE---------------------------CIHTLYGHTSTVRCMHLHEK---RVVSGSRDATLRVWDI 226 (445)
T ss_dssp TTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEEETT---EEEEEETTSEEEEEES
T ss_pred CCCeEEEEECCcCc---------------------------EEEEECCCCCcEEEEEecCC---EEEEEeCCCEEEEEEC
Confidence 99999999997532 22344579999999999743 7999999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
.+++++..+.+|...|.++.| ++ .++++|+.||.|++||+++.........+...+.+++|+ +..+++++.||.
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~---~~~l~~~~~d~~ 300 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQY--DG-RRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFD---GIHVVSGSLDTS 300 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEE--CS-SCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEEC---SSEEEEEETTSC
T ss_pred CCCcEEEEEcCCcccEEEEEE--CC-CEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEEC---CCEEEEEeCCCe
Confidence 999999999999999999999 44 789999999999999999887766566788899999993 348999999999
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC---CCCCEE
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP---KAGAVF 453 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~---~~~~v~ 453 (502)
|++||++++ ..+..+.+|...+.++.+++ .+|++|+.||.|++||+++++. +..+.. |...|+
T Consensus 301 i~i~d~~~~---------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~--~~~~~~~~~~~~~v~ 366 (445)
T 2ovr_B 301 IRVWDVETG---------NCIHTLTGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQC--LQTLQGPNKHQSAVT 366 (445)
T ss_dssp EEEEETTTC---------CEEEEECCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE--EEEECSTTSCSSCEE
T ss_pred EEEEECCCC---------CEEEEEcCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcE--EEEEccCCCCCCCEE
Confidence 999999986 77888899999999998863 7999999999999999998874 445544 888999
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 454 SVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 454 ~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+++|++ . +|++|+.||.|++||+.+++.+...
T Consensus 367 ~~~~~~--~-~l~s~~~dg~v~iwd~~~~~~~~~~ 398 (445)
T 2ovr_B 367 CLQFNK--N-FVITSSDDGTVKLWDLKTGEFIRNL 398 (445)
T ss_dssp EEEECS--S-EEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEEECC--C-EEEEEeCCCeEEEEECCCCceeeee
Confidence 999964 4 5999999999999999999888766
No 82
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=1.5e-31 Score=280.20 Aligned_cols=303 Identities=13% Similarity=0.193 Sum_probs=237.2
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCC--CCCceeeeeccccCCC-cceeeeecCCCCCCC--CCCE
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG--GDPNLYVHHHIIIPAF-PLCMAWLDCPLKDRE--KGNF 211 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~--~~~~l~~~~~~~~~~~-~~~~~w~~~~~~~s~--~~~~ 211 (502)
.|...|.+++|+|++++|++++ ++ .+.||.+..... .....+..| ... +.|++| +| ++++
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~-~~---~v~v~~~~~~~~~~~~~~~~~~h----~~~~v~~~~~-------sp~~~~~~ 80 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPC-GK---SAFVRCLDDGDSKVPPVVQFTGH----GSSVVTTVKF-------SPIKGSQY 80 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEE-TT---EEEEEECCSSCCSSCSEEEECTT----TTSCEEEEEE-------CSSTTCCE
T ss_pred CccCceeEEEECCCCCEEEEec-CC---eEEEEECCCCCCccccceEEecC----CCceEEEEEE-------CcCCCCCE
Confidence 3678899999999999999998 43 566666654310 111112222 222 467777 78 9999
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC---
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD--- 288 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D--- 288 (502)
||+|+.||.|+||++........ ........+..|...|.+++|+|+ +.+|++++.+
T Consensus 81 l~s~~~dg~v~vw~~~~~~~~~~-------------------~~~~~~~~~~~~~~~v~~~~~s~~-~~~l~~~~~~~~~ 140 (615)
T 1pgu_A 81 LCSGDESGKVIVWGWTFDKESNS-------------------VEVNVKSEFQVLAGPISDISWDFE-GRRLCVVGEGRDN 140 (615)
T ss_dssp EEEEETTSEEEEEEEEEEGGGTE-------------------EEEEEEEEEECCSSCEEEEEECTT-SSEEEEEECCSSC
T ss_pred EEEecCCCEEEEEeCCCCccccc-------------------ccccccchhhcccccEEEEEEeCC-CCEEEEeccCCCC
Confidence 99999999999999953210000 012233345578999999999999 5688898887
Q ss_pred -CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecC---CeEEEEeCCCC
Q 010769 289 -KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAA---DVESLAWDPHA 364 (502)
Q Consensus 289 -g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---~v~~v~~~p~~ 364 (502)
+.|++|| .++.+..+.+|...|.+++|+|++..+|++++.|+.|++||+++.+.......+.. .|.+++|+|++
T Consensus 141 ~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 141 FGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp SEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred ccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 6888888 67788899999999999999999955899999999999999988776665556777 89999999982
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-e---cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H---AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~---~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
..++++++.+|.|++||++++ ..+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||+.+++.
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~---------~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~~- 286 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSG---------EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSKC- 286 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTC---------CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTEE-
T ss_pred CCEEEEEeCCCeEEEEECCCC---------CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCcE-
Confidence 348999999999999999886 666777 5 899999999999 66 9999999999999999998874
Q ss_pred EEEEecCC----CCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 441 CIASRNPK----AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 441 ~~~~~~~~----~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+..+..+ ...+.++.|. ++. .+++++.+|.|++||+.+++.+....++
T Consensus 287 -~~~~~~~~~~~~~~~~~~~~~-~~~-~l~~~~~~g~i~~~d~~~~~~~~~~~~~ 338 (615)
T 1pgu_A 287 -VQKWTLDKQQLGNQQVGVVAT-GNG-RIISLSLDGTLNFYELGHDEVLKTISGH 338 (615)
T ss_dssp -EEEEECCTTCGGGCEEEEEEE-ETT-EEEEEETTSCEEEEETTEEEEEEEECCC
T ss_pred -EEEEcCCCCcccCceeEEEeC-CCC-eEEEEECCCCEEEEECCCCcEEEEEeCC
Confidence 4444444 3678888886 777 5889999999999999987776655443
No 83
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=6.4e-32 Score=264.02 Aligned_cols=290 Identities=14% Similarity=0.269 Sum_probs=222.8
Q ss_pred CCCccccccccccCC---CceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEE
Q 010769 136 DEDSEDLEDMTINPN---DAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM 212 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~---~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~l 212 (502)
..|.+.|.+++|+|+ +++|++|+.++ .+.||.+..........+..| .....++.| +|++++|
T Consensus 36 ~~h~~~v~~~~~~~~~~~g~~l~~~~~dg---~i~iw~~~~~~~~~~~~~~~h----~~~v~~~~~-------~~~~~~l 101 (368)
T 3mmy_A 36 SSPDDSIGCLSFSPPTLPGNFLIAGSWAN---DVRCWEVQDSGQTIPKAQQMH----TGPVLDVCW-------SDDGSKV 101 (368)
T ss_dssp SCCSSCEEEEEECCTTSSSEEEEEEETTS---EEEEEEECTTSCEEEEEEEEC----SSCEEEEEE-------CTTSSEE
T ss_pred cCCCCceEEEEEcCCCCCceEEEEECCCC---cEEEEEcCCCCceeEEEeccc----cCCEEEEEE-------CcCCCEE
Confidence 468999999999999 59999999887 567777765332110112223 233467777 7899999
Q ss_pred EEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEe--cCCCCcEEEEEecCCc
Q 010769 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW--NKEFRNILASASADKQ 290 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~--~~~~~~~l~sgs~Dg~ 290 (502)
++|+.||.|+|||+...... .+.+|...|++++| +|+ +.+|++|+.||.
T Consensus 102 ~s~~~dg~v~iwd~~~~~~~----------------------------~~~~~~~~v~~~~~~~~~~-~~~l~~~~~dg~ 152 (368)
T 3mmy_A 102 FTASCDKTAKMWDLSSNQAI----------------------------QIAQHDAPVKTIHWIKAPN-YSCVMTGSWDKT 152 (368)
T ss_dssp EEEETTSEEEEEETTTTEEE----------------------------EEEECSSCEEEEEEEECSS-CEEEEEEETTSE
T ss_pred EEEcCCCcEEEEEcCCCCce----------------------------eeccccCceEEEEEEeCCC-CCEEEEccCCCc
Confidence 99999999999999753211 13369999999999 888 668999999999
Q ss_pred EEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE--eecCCeEEEEeCCCCC---
Q 010769 291 VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAE--- 365 (502)
Q Consensus 291 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~p~~~--- 365 (502)
|++||+.+++++..+..|. .+.++.+.+ ..+++++.++.+++|+++......... .....+.++++.+...
T Consensus 153 i~vwd~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (368)
T 3mmy_A 153 LKFWDTRSSNPMMVLQLPE-RCYCADVIY---PMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKP 228 (368)
T ss_dssp EEEECSSCSSCSEEEECSS-CEEEEEEET---TEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCE
T ss_pred EEEEECCCCcEEEEEecCC-CceEEEecC---CeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCC
Confidence 9999999999998888654 677777775 468889999999999998764332111 2334455665544322
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC------------CeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 366 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
..+++++.+|.|++|+++.... ...+..+..|.. +|++++|+|++ .+|++++.||.|++||
T Consensus 229 ~~~~~~~~dg~i~i~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd 301 (368)
T 3mmy_A 229 TGFALGSIEGRVAIHYINPPNP------AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWD 301 (368)
T ss_dssp EEEEEEETTSEEEEEESSCSCH------HHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEE
T ss_pred CeEEEecCCCcEEEEecCCCCc------cccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEE
Confidence 2399999999999999987521 145667777765 79999999998 8999999999999999
Q ss_pred CCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 434 LSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 434 ~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
+.+++ ++..+..|...|.+++|+|++.+ |++|+.|+..+.|++...
T Consensus 302 ~~~~~--~~~~~~~~~~~v~~~~~s~~g~~-l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 302 KDART--KLKTSEQLDQPISACCFNHNGNI-FAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp TTTTE--EEEECCCCSSCEEEEEECTTSSC-EEEEECCCSTTCGGGCCT
T ss_pred CCCCc--EEEEecCCCCCceEEEECCCCCe-EEEEecccccccccccCC
Confidence 99887 57778889999999999999995 888888876665555443
No 84
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=6.8e-32 Score=271.74 Aligned_cols=258 Identities=16% Similarity=0.283 Sum_probs=198.2
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc------
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT------ 266 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~------ 266 (502)
..|++| +|+|++||+|+.||.|+||++.......+ ...........+.+|.
T Consensus 31 V~~v~~-------s~~g~~la~g~~dg~v~iw~~~~~~~~~~----------------~~~~~~~~~~~~~~h~~~~~~~ 87 (447)
T 3dw8_B 31 ISTVEF-------NHSGELLATGDKGGRVVIFQQEQENKIQS----------------HSRGEYNVYSTFQSHEPEFDYL 87 (447)
T ss_dssp EEEEEE-------CSSSSEEEEEETTSEEEEEEECC-----C----------------CCCCCEEEEEEEECCCCEEEGG
T ss_pred EEEEEE-------CCCCCEEEEEcCCCeEEEEEecCCCCCCc----------------ccccceeEeccccccccccccc
Confidence 367777 79999999999999999999976432110 0001122344556787
Q ss_pred ------cceeeEEecCCCC-cEEEEEecCCcEEEEECCCCeee-------------------------------------
Q 010769 267 ------DSVLGLAWNKEFR-NILASASADKQVKIWDVAAGKCN------------------------------------- 302 (502)
Q Consensus 267 ------~~V~~l~~~~~~~-~~l~sgs~Dg~v~vwd~~~~~~~------------------------------------- 302 (502)
..|++++|+|++. .+|++|+.|++|++|++.+++..
T Consensus 88 ~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (447)
T 3dw8_B 88 KSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEAS 167 (447)
T ss_dssp GTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEE
T ss_pred ccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeecc
Confidence 8899999999942 68999999999999999765432
Q ss_pred --EE-eccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc--------eEeecCCeEEEEeCCCCCCEEEEE
Q 010769 303 --LT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF--------KWAVAADVESLAWDPHAEHSFVVS 371 (502)
Q Consensus 303 --~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------~~~~~~~v~~v~~~p~~~~~l~~~ 371 (502)
.. ..+|...|.+++|+|++ .+|++| .|+.|++||++....... ...|...|.+++|+|++..+|++|
T Consensus 168 ~~~~~~~~h~~~v~~~~~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~ 245 (447)
T 3dw8_B 168 PRRIFANAHTYHINSISINSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYS 245 (447)
T ss_dssp EEEEECSCCSSCCCEEEECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEE
T ss_pred ceEEeccCCCcceEEEEEcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEE
Confidence 12 36799999999999998 888888 799999999984332221 235778899999999885699999
Q ss_pred eCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC------------CeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CC
Q 010769 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK------------AVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQ 438 (502)
Q Consensus 372 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~------------~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~ 438 (502)
+.||.|++||+++.... ...+..+..|.. .|.+++|+|++ .+|++++. +.|++||++. ++
T Consensus 246 ~~dg~i~iwd~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~-~~v~iwd~~~~~~ 318 (447)
T 3dw8_B 246 SSKGTIRLCDMRASALC-----DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSG-RYMMTRDY-LSVKVWDLNMENR 318 (447)
T ss_dssp ETTSCEEEEETTTCSSS-----CTTCEEECCC-----CCHHHHHTTCEEEEEECTTS-SEEEEEES-SEEEEEETTCCSS
T ss_pred eCCCeEEEEECcCCccc-----cceeeEeccCCCccccccccccCceEEEEEECCCC-CEEEEeeC-CeEEEEeCCCCcc
Confidence 99999999999987310 122677777775 89999999998 89999998 9999999987 55
Q ss_pred eeEEEEecCCCCC---------------EEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010769 439 PSCIASRNPKAGA---------------VFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 439 ~~~~~~~~~~~~~---------------v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~ 485 (502)
+ +..+..|... ++.++|+|++++ |++|+.||.|+|||+.+++.+
T Consensus 319 ~--~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~-l~s~s~dg~v~iwd~~~~~~~ 377 (447)
T 3dw8_B 319 P--VETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV-VMTGSYNNFFRMFDRNTKRDI 377 (447)
T ss_dssp C--SCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE-EEEECSTTEEEEEETTTCCEE
T ss_pred c--cceeeccccccccccccccccccccceEEEECCCCCE-EEEeccCCEEEEEEcCCCcce
Confidence 3 3444445321 345999999995 899999999999999998775
No 85
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-30 Score=255.23 Aligned_cols=247 Identities=15% Similarity=0.266 Sum_probs=210.3
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.||.|+||++.... ....+.+|...|.+++
T Consensus 36 ~~~~~-------s~~~~~l~~~~~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~v~~~~ 81 (369)
T 3zwl_B 36 TQVKY-------NKEGDLLFSCSKDSSASVWYSLNGE---------------------------RLGTLDGHTGTIWSID 81 (369)
T ss_dssp EEEEE-------CTTSCEEEEEESSSCEEEEETTTCC---------------------------EEEEECCCSSCEEEEE
T ss_pred EEEEE-------cCCCCEEEEEeCCCEEEEEeCCCch---------------------------hhhhhhhcCCcEEEEE
Confidence 67777 7899999999999999999987532 2234557999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCCCCccc-
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSGF- 347 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~~- 347 (502)
|+|+ +.+|++++.||+|++||+.+++++..+. |...|.+++|+|++ .+|++++.+ +.|++||++.......
T Consensus 82 ~~~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~-~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~ 158 (369)
T 3zwl_B 82 VDCF-TKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCG-NYFLAILDNVMKNPGSINIYEIERDSATHEL 158 (369)
T ss_dssp ECTT-SSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTS-SEEEEEECCBTTBCCEEEEEEEEECTTTCCE
T ss_pred EcCC-CCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCC-CEEEEecCCccCCCCEEEEEEecCCccceee
Confidence 9998 6699999999999999999999999888 88999999999999 899999998 9999999987654321
Q ss_pred ----------eEeecC--CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 348 ----------KWAVAA--DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 348 ----------~~~~~~--~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
...+.. .+.+++|+|++. ++++++.+|.|++||+++. ...+..+..|...|.+++|+|+
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~--------~~~~~~~~~~~~~v~~~~~~~~ 229 (369)
T 3zwl_B 159 TKVSEEPIHKIITHEGLDAATVAGWSTKGK-YIIAGHKDGKISKYDVSNN--------YEYVDSIDLHEKSISDMQFSPD 229 (369)
T ss_dssp EEECSSCSEEEECCTTCCCEEEEEECGGGC-EEEEEETTSEEEEEETTTT--------TEEEEEEECCSSCEEEEEECTT
T ss_pred cccccceeeeccCCcCccceeEEEEcCCCC-EEEEEcCCCEEEEEECCCC--------cEeEEEEecCCCceeEEEECCC
Confidence 223333 899999999865 8999999999999999984 3778888999999999999999
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC--------------cEEEEECCC
Q 010769 416 VPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG--------------KLEIWDTLS 481 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg--------------~i~vwd~~~ 481 (502)
+ .+|++++.|+.|++||+.+++. +..+. +...+.+++|+|++++ +++++.++ .+++||+.+
T Consensus 230 ~-~~l~~~~~d~~i~v~d~~~~~~--~~~~~-~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 230 L-TYFITSSRDTNSFLVDVSTLQV--LKKYE-TDCPLNTAVITPLKEF-IILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp S-SEEEEEETTSEEEEEETTTCCE--EEEEE-CSSCEEEEEECSSSSE-EEEEECCC-------------CEEEEEETTT
T ss_pred C-CEEEEecCCceEEEEECCCCce--eeeec-CCCCceeEEecCCCce-EEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 8 8999999999999999999874 33333 6678999999999995 77777777 899999999
Q ss_pred CccccccccC
Q 010769 482 DAGISNRFSK 491 (502)
Q Consensus 482 ~~~~~~~~~~ 491 (502)
++.+....++
T Consensus 305 ~~~~~~~~~~ 314 (369)
T 3zwl_B 305 EEEIGRVQGH 314 (369)
T ss_dssp CCEEEEEECC
T ss_pred Ccchhheecc
Confidence 9887766544
No 86
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=5.5e-31 Score=254.92 Aligned_cols=249 Identities=17% Similarity=0.253 Sum_probs=208.4
Q ss_pred ceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 194 LCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +|+ +++||+|+.|++|+|||+....... ......+.+|...|.++
T Consensus 42 ~~v~~-------sp~~~~~l~S~s~D~~i~vWd~~~~~~~~----------------------~~~~~~l~~h~~~V~~~ 92 (340)
T 4aow_A 42 TQIAT-------TPQFPDMILSASRDKTIIMWKLTRDETNY----------------------GIPQRALRGHSHFVSDV 92 (340)
T ss_dssp EEEEE-------CTTCTTEEEEEETTSCEEEEEECCSSSCS----------------------EEEEEEECCCSSCEEEE
T ss_pred EEEEE-------eCCCCCEEEEEcCCCeEEEEECCCCCccc----------------------ceeeEEEeCCCCCEEEE
Confidence 78888 676 7899999999999999997543322 22233566899999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEee
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~ 351 (502)
+|+|+ +.+|++|+.|+.|++|+............+...+..+.+++.+ .+|++++.|+.+++||+....... ....+
T Consensus 93 ~~s~d-g~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~ 170 (340)
T 4aow_A 93 VISSD-GQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN-RQIVSGSRDKTIKLWNTLGVCKYTVQDESH 170 (340)
T ss_dssp EECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEEEEECSSSC
T ss_pred EECCC-CCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC-ccceeecCCCeEEEEEeCCCceEEEEeccc
Confidence 99999 5699999999999999999999888888889999999999998 889999999999999987654332 22356
Q ss_pred cCCeEEEEeCCCCC-CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 352 AADVESLAWDPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 352 ~~~v~~v~~~p~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
...+.+++|++++. .++++++.|+.|++||+++. ..+..+.+|..+|++++|+|++ .+|++|+.|+.|+
T Consensus 171 ~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~---------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~Dg~i~ 240 (340)
T 4aow_A 171 SEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANC---------KLKTNHIGHTGYLNTVTVSPDG-SLCASGGKDGQAM 240 (340)
T ss_dssp SSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEECTTS-SEEEEEETTCEEE
T ss_pred cCcccceEEccCCCCcEEEEEcCCCEEEEEECCCC---------ceeeEecCCCCcEEEEEECCCC-CEEEEEeCCCeEE
Confidence 77899999988754 36788999999999999986 7788889999999999999998 8999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+||+++.+ .+..+.. ...|.++.|+|++. +++++.|+.|+|||+.++..+...
T Consensus 241 iwd~~~~~--~~~~~~~-~~~v~~~~~~~~~~--~~~~~~d~~i~iwd~~~~~~~~~~ 293 (340)
T 4aow_A 241 LWDLNEGK--HLYTLDG-GDIINALCFSPNRY--WLCAATGPSIKIWDLEGKIIVDEL 293 (340)
T ss_dssp EEETTTTE--EEEEEEC-SSCEEEEEECSSSS--EEEEEETTEEEEEETTTTEEEEEE
T ss_pred EEEeccCc--eeeeecC-CceEEeeecCCCCc--eeeccCCCEEEEEECCCCeEEEec
Confidence 99999887 3444443 36799999999986 455677999999999987766543
No 87
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1e-31 Score=269.49 Aligned_cols=267 Identities=20% Similarity=0.341 Sum_probs=206.9
Q ss_pred CCccccccccccCC-CceEEEEEecCCcceeEEEEEecCC--------CCCCceeeeeccccCCCcceeeeecCCCCCCC
Q 010769 137 EDSEDLEDMTINPN-DAVIVCARNEDDVSHLEVYILEESD--------GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE 207 (502)
Q Consensus 137 ~~~~~v~~~~~~p~-~~~l~~~~~~~~~~~l~v~~~~~~~--------~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~ 207 (502)
.|...|.+++|+|+ +++|++++.++ .+.||.+.... ......+..|. ..+.++.| +|
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg---~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~----~~v~~l~~-------~~ 191 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSS---DVLVFDYTKHPSKPEPSGECQPDLRLRGHQ----KEGYGLSW-------NP 191 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSS---CEEEEEGGGSCSSCCTTCCCCCSEEEECCS----SCCCCEEE-------CT
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCC---cEEEEECCCcccccCccccCCCcEEecCCC----CCeEEEEe-------CC
Confidence 47789999999998 67888888776 46677665421 11111122232 23478888 67
Q ss_pred CCC-EEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 208 KGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
++. +|++|+.||.|+||++........ .......+.+|...|.+++|+|.++.+|++++
T Consensus 192 ~~~~~l~s~~~dg~i~vwd~~~~~~~~~--------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 192 NLNGYLLSASDDHTICLWDINATPKEHR--------------------VIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp TSTTEEEEECTTSCEEEEETTSCCBGGG--------------------EEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCCCeEEEEeCCCeEEEEeCCCCCCCCc--------------------eeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 777 999999999999999975321110 01122345589999999999996688999999
Q ss_pred cCCcEEEEECCCC---eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC-CccceEeecCCeEEEEeCC
Q 010769 287 ADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDP 362 (502)
Q Consensus 287 ~Dg~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~v~~~p 362 (502)
.||.|++||++++ +++..+..|...|++++|+|++..+|++|+.||.|++||++... .......|...|.+++|+|
T Consensus 252 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp 331 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSP 331 (430)
T ss_dssp TTSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECS
T ss_pred CCCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECC
Confidence 9999999999987 57778888999999999999996789999999999999999854 3444556889999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCCCCCC-----CCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010769 363 HAEHSFVVSLEDGTIKGFDIRTAKSDPD-----STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 363 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~-----~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
++..++++++.||.|++||++....... ......+..+.+|...|++++|+|+++.+|++++.||.|+||++...
T Consensus 332 ~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 332 HNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp SCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 9888899999999999999987421100 00014567778899999999999998559999999999999998753
No 88
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=2.7e-31 Score=287.98 Aligned_cols=249 Identities=19% Similarity=0.292 Sum_probs=215.6
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| +|++++||+|+.+|.|+||++.++. ....+.+|...|++++
T Consensus 17 ~~i~~-------sp~~~~la~~~~~g~v~iwd~~~~~---------------------------~~~~~~~~~~~v~~~~ 62 (814)
T 3mkq_A 17 KGIDF-------HPTEPWVLTTLYSGRVEIWNYETQV---------------------------EVRSIQVTETPVRAGK 62 (814)
T ss_dssp EEEEE-------CSSSSEEEEEETTSEEEEEETTTTE---------------------------EEEEEECCSSCEEEEE
T ss_pred EEEEE-------CCCCCEEEEEeCCCEEEEEECCCCc---------------------------eEEEEecCCCcEEEEE
Confidence 68888 8999999999999999999987532 2223457999999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC-CCccceEeec
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~~ 352 (502)
|+|+ +.+|++|+.||.|++||+.+++.+..+.+|...|++++|+|++ .+|++++.||.|++|++++. ........+.
T Consensus 63 ~s~~-~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~ 140 (814)
T 3mkq_A 63 FIAR-KNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWALEQTFEGHE 140 (814)
T ss_dssp EEGG-GTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSEEEEEEECCS
T ss_pred EeCC-CCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCceEEEEEcCCC
Confidence 9999 5699999999999999999999999999999999999999999 88999999999999999886 3344455678
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCC-CCeeEEEEcC--CCCCEEEEEeCCCcE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD-KAVCTISYNP--LVPNLLATGSTDKMV 429 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp--~~~~~l~t~s~dg~i 429 (502)
..|.+++|+|.++..+++++.+|.|++||++.. .....+..+. ..+.+++|+| ++ .+|++++.||.|
T Consensus 141 ~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~---------~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i 210 (814)
T 3mkq_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS---------TPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTI 210 (814)
T ss_dssp SCEEEEEEETTEEEEEEEEETTSEEEEEETTCS---------SCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEE
T ss_pred CcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC---------cceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEE
Confidence 899999999944558999999999999999876 4555555544 8999999999 76 899999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
++||+.+++ .+..+..|.+.|.+++|+|+++ +|++++.||.|++||+.++..+.....+
T Consensus 211 ~~~d~~~~~--~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 269 (814)
T 3mkq_A 211 KIWDYQTKS--CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYKVEKTLNVG 269 (814)
T ss_dssp EEEETTTTE--EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCSEEEEECCS
T ss_pred EEEECCCCc--EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCcEEEEeecC
Confidence 999999887 5667778999999999999999 5999999999999999998877655433
No 89
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=3.7e-31 Score=261.12 Aligned_cols=253 Identities=17% Similarity=0.194 Sum_probs=199.8
Q ss_pred ceeeeecCCCCCCCCC-CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 194 LCMAWLDCPLKDREKG-NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~-~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++| +|++ ++||+|+.||.|+||++...... ......+|...|.++
T Consensus 77 ~~~~~-------~~~~~~~l~s~~~dg~i~iwd~~~~~~~-------------------------~~~~~~~h~~~v~~~ 124 (383)
T 3ei3_B 77 TSLEW-------HPTHPTTVAVGSKGGDIILWDYDVQNKT-------------------------SFIQGMGPGDAITGM 124 (383)
T ss_dssp EEEEE-------CSSCTTEEEEEEBTSCEEEEETTSTTCE-------------------------EEECCCSTTCBEEEE
T ss_pred EEEEE-------CCCCCCEEEEEcCCCeEEEEeCCCcccc-------------------------eeeecCCcCCceeEE
Confidence 67777 7888 99999999999999999753221 112234799999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc---CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH---HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~---h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 349 (502)
+|+|+++.+|++|+.|+.|++||+.. ..+..+.. |...|.+++|+|++ .+|++|+.|+.|++||++ ........
T Consensus 125 ~~~~~~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~-~~~~~~~~ 201 (383)
T 3ei3_B 125 KFNQFNTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSR-QMLATGDSTGRLLLLGLD-GHEIFKEK 201 (383)
T ss_dssp EEETTEEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTT-TEEEEEETTSEEEEEETT-SCEEEEEE
T ss_pred EeCCCCCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCC-CEEEEECCCCCEEEEECC-CCEEEEec
Confidence 99995467999999999999999986 44555543 44889999999999 899999999999999995 44444456
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC-CCCCEEEEEeCCCc
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGSTDKM 428 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~t~s~dg~ 428 (502)
.|...|.+++|+|++..++++++.|+.|++||+++.... ...+..+ .|...|.+++|+| ++ .+|++++.|+.
T Consensus 202 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~ 274 (383)
T 3ei3_B 202 LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-----NSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNE 274 (383)
T ss_dssp CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-----TCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSE
T ss_pred cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-----cceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCc
Confidence 788999999999988778999999999999999974210 1334444 7999999999999 87 89999999999
Q ss_pred EEEEECCCCCeeEEEEec-----CC----------CCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 429 VKLWDLSNNQPSCIASRN-----PK----------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 429 i~vwd~~~~~~~~~~~~~-----~~----------~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
|++||+++.+........ .| .+.+..++|+|++.+ +|+.||.|+|||+.+++.+..+..+
T Consensus 275 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~---s~s~d~~i~iwd~~~~~~~~~l~~~ 349 (383)
T 3ei3_B 275 IRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL---LLNDKRTIDIYDANSGGLVHQLRDP 349 (383)
T ss_dssp EEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT---CTTCCCCEEEEETTTCCEEEEECBT
T ss_pred EEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc---ccCCCCeEEEEecCCCceeeeecCC
Confidence 999999987643222211 11 134556777777763 7789999999999999988776543
No 90
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.6e-32 Score=274.28 Aligned_cols=255 Identities=14% Similarity=0.147 Sum_probs=199.6
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
..|++| +| ++++||+|+.||.|+||++...... ........ .+|...|++
T Consensus 66 V~~~~~-------s~~~~~~l~s~s~dg~v~vwd~~~~~~~---------------------~~~~~~~~-~~h~~~v~~ 116 (437)
T 3gre_A 66 ITSSAV-------SPGETPYLITGSDQGVIKIWNLKEIIVG---------------------EVYSSSLT-YDCSSTVTQ 116 (437)
T ss_dssp EEEEEE-------ECSSSCEEEEEETTSEEEEEEHHHHHTT---------------------CCCSCSEE-EECSSCEEE
T ss_pred eEEEEE-------CCCCCCEEEEecCCceEEEeECcccccC---------------------cccceeee-ccCCCCEEE
Confidence 378887 68 8999999999999999998641100 00111111 158999999
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECC---CCeeeEEecc------------CCCCeEEEE--EcCCCCcEEEEEECCCcE
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVA---AGKCNLTLEH------------HTDKVQAVA--WNHHSPQILLSGSFDRSV 334 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~---~~~~~~~~~~------------h~~~v~~l~--~~~~~~~~l~s~~~dg~i 334 (502)
++|+|+ +.+|++|+.||+|++||+. +++.+..+.. +...+.++. +++++ .+|++|+.||.|
T Consensus 117 ~~~~~~-~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i 194 (437)
T 3gre_A 117 ITMIPN-FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRV 194 (437)
T ss_dssp EEECTT-SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEE
T ss_pred EEEeCC-CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeE
Confidence 999998 6699999999999999994 5544443332 455666666 55677 899999999999
Q ss_pred EEEeCCCCCCccceEe--ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe-cCCCCeeEEE
Q 010769 335 VMKDARISTHSGFKWA--VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTIS 411 (502)
Q Consensus 335 ~vwd~~~~~~~~~~~~--~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 411 (502)
++||+++.+....... |...|.+++|+|++. ++++|+.||.|++||+++. .++..+. .|..+|++++
T Consensus 195 ~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~~---------~~~~~~~~~~~~~v~~~~ 264 (437)
T 3gre_A 195 IIFDIRTLERLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRFN---------VLIRSWSFGDHAPITHVE 264 (437)
T ss_dssp EEEETTTCCEEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTTT---------EEEEEEBCTTCEEEEEEE
T ss_pred EEEeCCCCeeeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCCc---------cEEEEEecCCCCceEEEE
Confidence 9999999887665555 788999999999865 8999999999999999986 6667665 7888999997
Q ss_pred EcC----CCCCEEEEEeCCCcEEEEECCCCCeeEEEEe----------------------cC--CCCCEEEEEEcCCCCc
Q 010769 412 YNP----LVPNLLATGSTDKMVKLWDLSNNQPSCIASR----------------------NP--KAGAVFSVAFSEDSPF 463 (502)
Q Consensus 412 ~sp----~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~----------------------~~--~~~~v~~~~~spd~~~ 463 (502)
|+| ++ .+|++|+.||.|++||+++++....... .+ |...|++++|+ ++.
T Consensus 265 ~~~~~s~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~- 341 (437)
T 3gre_A 265 VCQFYGKNS-VIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK- 341 (437)
T ss_dssp ECTTTCTTE-EEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE-
T ss_pred eccccCCCc-cEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce-
Confidence 765 34 6999999999999999998874322221 11 56678899999 666
Q ss_pred EEEEEeCCCcEEEEECCCCccccccccC
Q 010769 464 VLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 464 llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
+|++|+.||.|++||+.+++.+..+.++
T Consensus 342 ~l~s~~~d~~i~~wd~~~~~~~~~~~~~ 369 (437)
T 3gre_A 342 ILLTDEATSSIVMFSLNELSSSKAVISP 369 (437)
T ss_dssp EEEEEGGGTEEEEEETTCGGGCEEEECC
T ss_pred EEEecCCCCeEEEEECCCcccceEEecc
Confidence 5999999999999999999988766654
No 91
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=3.3e-31 Score=256.86 Aligned_cols=249 Identities=12% Similarity=0.139 Sum_probs=204.9
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|++++|++|+.||.|+||++...... .......+|...|+++
T Consensus 14 v~~~~~-------s~~~~~l~~~~~d~~v~iw~~~~~~~~------------------------~~~~~~~~~~~~v~~~ 62 (342)
T 1yfq_A 14 ISDIKI-------IPSKSLLLITSWDGSLTVYKFDIQAKN------------------------VDLLQSLRYKHPLLCC 62 (342)
T ss_dssp EEEEEE-------EGGGTEEEEEETTSEEEEEEEETTTTE------------------------EEEEEEEECSSCEEEE
T ss_pred EEEEEE-------cCCCCEEEEEcCCCeEEEEEeCCCCcc------------------------ccceeeeecCCceEEE
Confidence 368887 688999999999999999998753211 0112233799999999
Q ss_pred EecCCCCc-EEEEEecCCcEEEEEC-CCCeeeEEecc--CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC-------
Q 010769 273 AWNKEFRN-ILASASADKQVKIWDV-AAGKCNLTLEH--HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI------- 341 (502)
Q Consensus 273 ~~~~~~~~-~l~sgs~Dg~v~vwd~-~~~~~~~~~~~--h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~------- 341 (502)
+|+|+ +. +|++|+.||.|++||+ .+++. ..+.+ |...|.+++|+| + .+|++++.|+.|++||+++
T Consensus 63 ~~~~~-~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~ 138 (342)
T 1yfq_A 63 NFIDN-TDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIA 138 (342)
T ss_dssp EEEES-SSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEE
T ss_pred EECCC-CCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEccccccccccc
Confidence 99999 77 8999999999999999 77755 67788 999999999999 6 8999999999999999987
Q ss_pred --CCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCC-CCCCCCCCCCCccEEEecCCCCeeEEEEcC-CCC
Q 010769 342 --STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT-AKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVP 417 (502)
Q Consensus 342 --~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~-~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~ 417 (502)
.+... ...+...+.+++|+|++ +++++.+|.|++||+++ ... ........|...|.+++|+| ++
T Consensus 139 ~~~~~~~-~~~~~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~-------~~~~~~~~~~~~i~~i~~~~~~~- 206 (342)
T 1yfq_A 139 VKNLNSN-NTKVKNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDD-------NGTIEESGLKYQIRDVALLPKEQ- 206 (342)
T ss_dssp EEESCSS-SSSSCCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTC-------CCEEEECSCSSCEEEEEECSGGG-
T ss_pred ccCCeee-EEeeCCceEEEEecCCc---EEEEeCCCeEEEEECCccccc-------cceeeecCCCCceeEEEECCCCC-
Confidence 55444 23378899999999854 99999999999999997 521 23345567889999999999 87
Q ss_pred CEEEEEeCCCcEEEEECCCC------CeeEEEEecCCC---------CCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 418 NLLATGSTDKMVKLWDLSNN------QPSCIASRNPKA---------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~------~~~~~~~~~~~~---------~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.+|++++.||.|++|++... + ....+..|. +.|.+++|+|++++ |++|+.||.|++||+.++
T Consensus 207 ~~l~~~~~dg~i~i~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~-l~~~~~dg~i~vwd~~~~ 283 (342)
T 1yfq_A 207 EGYACSSIDGRVAVEFFDDQGDDYNSS--KRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKF-LYTAGSDGIISCWNLQTR 283 (342)
T ss_dssp CEEEEEETTSEEEEEECCTTCCSTTCT--TCEEEECCCCCTTCCSSCCCEEEEEECTTTCC-EEEEETTSCEEEEETTTT
T ss_pred CEEEEEecCCcEEEEEEcCCCcccccc--cceeeecccccccccccceeEEEEEEcCCCCE-EEEecCCceEEEEcCccH
Confidence 89999999999999999876 4 334445554 49999999999995 889999999999999999
Q ss_pred ccccccccC
Q 010769 483 AGISNRFSK 491 (502)
Q Consensus 483 ~~~~~~~~~ 491 (502)
+.+.....+
T Consensus 284 ~~~~~~~~~ 292 (342)
T 1yfq_A 284 KKIKNFAKF 292 (342)
T ss_dssp EEEEECCCC
T ss_pred hHhhhhhcc
Confidence 887765544
No 92
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=2.1e-31 Score=301.80 Aligned_cols=302 Identities=21% Similarity=0.273 Sum_probs=240.3
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCC-------------------------ce--eeee---
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDP-------------------------NL--YVHH--- 185 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~-------------------------~l--~~~~--- 185 (502)
..|...|.++.|+|++++|++++.++ .+.+|.......... .+ ...+
T Consensus 879 ~~h~~~v~~v~~spdg~~l~s~s~dg---~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 955 (1249)
T 3sfz_A 879 RGHLSWVHGVMFSPDGSSFLTASDDQ---TIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQ 955 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTS---CEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCC
T ss_pred CCCccceEEEEECCCCCEEEEEeCCC---eEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcce
Confidence 35788999999999999999999887 567776442111000 00 0000
Q ss_pred -ccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCC
Q 010769 186 -HIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS 264 (502)
Q Consensus 186 -~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (502)
.........|+.| +|+++++++|+.+|.|++|++.... ....+.+
T Consensus 956 ~~~~~~~~i~~~~~-------sp~g~~l~~g~~~g~i~i~d~~~~~---------------------------~~~~~~~ 1001 (1249)
T 3sfz_A 956 IDYLPEAQVSCCCL-------SPHLEYVAFGDEDGAIKIIELPNNR---------------------------VFSSGVG 1001 (1249)
T ss_dssp EEEECCSCEEEEEE-------CTTSSEEEEEETTSCCEEEETTTTS---------------------------CEEECCC
T ss_pred EEEcccCcEEEEEE-------cCCCCEEEEEcCCCCEEEEEcCCCc---------------------------eeeeccc
Confidence 0001122344444 8999999999999999999997532 2223457
Q ss_pred cccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC
Q 010769 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 344 (502)
|...|++++|+|+ +.+|++++.||+|++||+.+++... +..|...|.++.|+|++ .+++++.||.|++||+.+++.
T Consensus 1002 h~~~v~~l~~s~d-g~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~v~~~~~~~~~--~l~~~~~dg~v~vwd~~~~~~ 1077 (1249)
T 3sfz_A 1002 HKKAVRHIQFTAD-GKTLISSSEDSVIQVWNWQTGDYVF-LQAHQETVKDFRLLQDS--RLLSWSFDGTVKVWNVITGRI 1077 (1249)
T ss_dssp CSSCCCCEEECSS-SSCEEEECSSSBEEEEETTTTEEEC-CBCCSSCEEEEEECSSS--EEEEEESSSEEEEEETTTTCC
T ss_pred CCCceEEEEECCC-CCEEEEEcCCCEEEEEECCCCceEE-EecCCCcEEEEEEcCCC--cEEEEECCCcEEEEECCCCce
Confidence 9999999999999 5699999999999999999998764 45799999999999965 688999999999999999988
Q ss_pred ccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe
Q 010769 345 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 345 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
......|...|.+++|+|++. ++++++.||.|++||+.+. .++..+.+|...|++++|+|++ .+|++|+
T Consensus 1078 ~~~~~~~~~~v~~~~~s~d~~-~l~s~s~d~~v~iwd~~~~---------~~~~~l~~h~~~v~~~~~s~dg-~~lat~~ 1146 (1249)
T 3sfz_A 1078 ERDFTCHQGTVLSCAISSDAT-KFSSTSADKTAKIWSFDLL---------SPLHELKGHNGCVRCSAFSLDG-ILLATGD 1146 (1249)
T ss_dssp CEEEECCSSCCCCEEECSSSS-SCEEECCSSCCCEECSSSS---------SCSBCCCCCSSCEEEEEECSSS-SEEEEEE
T ss_pred eEEEcccCCcEEEEEECCCCC-EEEEEcCCCcEEEEECCCc---------ceeeeeccCCCcEEEEEECCCC-CEEEEEe
Confidence 877778899999999999876 7999999999999999886 6677788999999999999998 9999999
Q ss_pred CCCcEEEEECCCCCeeEE-------EEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 425 TDKMVKLWDLSNNQPSCI-------ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 425 ~dg~i~vwd~~~~~~~~~-------~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
.||.|++||+.+++.... .....|.+.|++++|+|++.+ |++++ |.|++||+.+++.+.....+.
T Consensus 1147 ~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~-l~s~~--g~v~vwd~~~g~~~~~~~~~~ 1218 (1249)
T 3sfz_A 1147 DNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKT-LVSAG--GYLKWWNVATGDSSQTFYTNG 1218 (1249)
T ss_dssp TTSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSC-EEEES--SSEEEBCSSSCBCCCCCCCSS
T ss_pred CCCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCE-EEECC--CeEEEEECCCCceeeeeeccC
Confidence 999999999998763221 122568889999999999996 66665 899999999999887665543
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=100.00 E-value=2.2e-31 Score=263.85 Aligned_cols=249 Identities=10% Similarity=0.112 Sum_probs=179.1
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecC--------C
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK--------E 277 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~--------~ 277 (502)
++++++||+|+.|++|+||++....... ......+.+|.+.|++|+|+| +
T Consensus 98 ~~~~~~las~~~d~~v~lw~~~~~~~~~----------------------~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d 155 (393)
T 4gq1_A 98 PVYSLFLACVCQDNTVRLIITKNETIIT----------------------QHVLGGKSGHHNFVNDIDIADVYSADNRLA 155 (393)
T ss_dssp CEEEEEEEEEETTSCEEEEEEETTEEEE----------------------EEEECTTTSCSSCEEEEEEEEEECTTCSEE
T ss_pred CCCCCEEEEEeCCCcEEEEECCCCccce----------------------eeeecccCCCCCceEEEEEccccccccCCC
Confidence 5678899999999999999987533211 122335679999999999998 4
Q ss_pred CCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc----------
Q 010769 278 FRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---------- 347 (502)
Q Consensus 278 ~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---------- 347 (502)
+++|||||.|++|+|||+.++.++..+..|...|.+++|+|++..+|++|+.||+|++||+++++....
T Consensus 156 -~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~ 234 (393)
T 4gq1_A 156 -EQVIASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNP 234 (393)
T ss_dssp -EEEEEEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCC
T ss_pred -CCEEEEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccc
Confidence 579999999999999999999888888889999999999999867899999999999999987653221
Q ss_pred ---------------eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCC----------CCCCccEEEec
Q 010769 348 ---------------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS----------TSQQSSFTLHA 402 (502)
Q Consensus 348 ---------------~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~----------~~~~~~~~~~~ 402 (502)
...+...+.++.|++.....+++++.|+.+++||++........ ...........
T Consensus 235 ~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (393)
T 4gq1_A 235 WLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISL 314 (393)
T ss_dssp CSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECS
T ss_pred eEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccc
Confidence 12345668889987433458999999999999999876321100 00011122222
Q ss_pred CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 403 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 403 h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+...+..+.+.+.+..++++|+.||+|++||+.+++. ......|..+|++++|+|+|+ +||+++.+| +.+|.+..
T Consensus 315 ~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~--~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL~g 389 (393)
T 4gq1_A 315 FPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDS--NSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRLMG 389 (393)
T ss_dssp SCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTC--CEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEEGG
T ss_pred cCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcE--EEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEEeC
Confidence 2333333333333435677888999999999998874 344556778999999999999 488887665 77776643
No 94
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=1.6e-30 Score=262.08 Aligned_cols=277 Identities=24% Similarity=0.349 Sum_probs=223.4
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...|.++.|+ +++|++|+.++ .+.+|.+..... ...+..| .....|+.| ++++|++|+
T Consensus 157 ~h~~~v~~~~~~--~~~l~s~~~dg---~i~vwd~~~~~~--~~~~~~h----~~~v~~~~~---------~~~~l~s~s 216 (445)
T 2ovr_B 157 GHTGGVWSSQMR--DNIIISGSTDR---TLKVWNAETGEC--IHTLYGH----TSTVRCMHL---------HEKRVVSGS 216 (445)
T ss_dssp CCSSCEEEEEEE--TTEEEEEETTS---CEEEEETTTTEE--EEEECCC----SSCEEEEEE---------ETTEEEEEE
T ss_pred CCCCCEEEEEec--CCEEEEEeCCC---eEEEEECCcCcE--EEEECCC----CCcEEEEEe---------cCCEEEEEe
Confidence 578899999997 67999999887 456665543321 0111112 222356665 477899999
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
.||.|++||+.... ....+.+|...|.+++| + +.+|++|+.||.|++||+
T Consensus 217 ~dg~i~~wd~~~~~---------------------------~~~~~~~~~~~v~~~~~--~-~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 217 RDATLRVWDIETGQ---------------------------CLHVLMGHVAAVRCVQY--D-GRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp TTSEEEEEESSSCC---------------------------EEEEEECCSSCEEEEEE--C-SSCEEEEETTSCEEEEEG
T ss_pred CCCEEEEEECCCCc---------------------------EEEEEcCCcccEEEEEE--C-CCEEEEEcCCCEEEEEEC
Confidence 99999999997532 22234579999999999 3 458999999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
.+++++..+.+|...|.++.| ++ .++++++.||.|++||+++++.......+...+.++.+++ .++++|+.||.
T Consensus 267 ~~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~ 340 (445)
T 2ovr_B 267 ETETCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKD---NILVSGNADST 340 (445)
T ss_dssp GGTEEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEET---TEEEEEETTSC
T ss_pred CCCcEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEEeC---CEEEEEeCCCe
Confidence 999999999999999999999 44 7899999999999999999887766667788899888864 38999999999
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEec---CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe---cCCCC
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHA---HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR---NPKAG 450 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~---h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~---~~~~~ 450 (502)
|++||++++ ..+..+.. |...|++++|++ .+|++|+.||.|++||+.+++....... ..|.+
T Consensus 341 i~vwd~~~~---------~~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 408 (445)
T 2ovr_B 341 VKIWDIKTG---------QCLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGG 408 (445)
T ss_dssp EEEEETTTC---------CEEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEEECTTGGGTC
T ss_pred EEEEECCCC---------cEEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCceeeeeeccccCCCCc
Confidence 999999886 66777765 889999999974 7999999999999999999884332211 46788
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCc----EEEEECCCC
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGK----LEIWDTLSD 482 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~----i~vwd~~~~ 482 (502)
.|++++|+|++. +|++|+.||+ |.|||+...
T Consensus 409 ~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 409 VVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred eEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 999999999998 5999999998 999999764
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=2.7e-30 Score=261.70 Aligned_cols=232 Identities=19% Similarity=0.341 Sum_probs=199.0
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
++++|++|+.||.|++||+.... ....+.+|...|++++|+|+ + +|++|+.
T Consensus 131 ~~~~l~sgs~dg~i~vwd~~~~~---------------------------~~~~~~~h~~~V~~l~~~~~-~-~l~s~s~ 181 (464)
T 3v7d_B 131 EDNYVITGADDKMIRVYDSINKK---------------------------FLLQLSGHDGGVWALKYAHG-G-ILVSGST 181 (464)
T ss_dssp ETTEEEEEETTSCEEEEETTTTE---------------------------EEEEECCCSSCEEEEEECST-T-EEEEEET
T ss_pred CCCEEEEEcCCCcEEEEECCCCc---------------------------EEEEEeCCCcCEEEEEEcCC-C-EEEEEeC
Confidence 57899999999999999987532 23345589999999999998 3 8999999
Q ss_pred CCcEEEEECCCCeeeEEeccCCCCeEEEEEcC--CCCcEEEEEECCCcEEEEeCCCCCCcc-------------------
Q 010769 288 DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSG------------------- 346 (502)
Q Consensus 288 Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~------------------- 346 (502)
||+|++||+.+++++..+.+|...|.+++|++ ++ .+|++|+.||.|++||+++.....
T Consensus 182 dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 182 DRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp TSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCT
T ss_pred CCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCe
Confidence 99999999999999999999999999999984 55 899999999999999998765321
Q ss_pred ----ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEE
Q 010769 347 ----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 347 ----~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
....+...+.++. +++ .++++++.||.|++||+++. .++..+.+|...|.+++|+|++ .+|++
T Consensus 261 ~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~~~~-~~l~s 327 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQM---------KCLYILSGHTDRIYSTIYDHER-KRCIS 327 (464)
T ss_dssp TEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTT---------EEEEEECCCSSCEEEEEEETTT-TEEEE
T ss_pred EEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCC---------cEEEEecCCCCCEEEEEEcCCC-CEEEE
Confidence 1224556677764 433 48999999999999999986 7788899999999999999998 89999
Q ss_pred EeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 423 GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
|+.||.|++||+.+++ ++..+.+|...|.+++|++ . .|++|+.||.|++||+.++.....
T Consensus 328 g~~dg~i~vwd~~~~~--~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~v~vwd~~~~~~~~~ 387 (464)
T 3v7d_B 328 ASMDTTIRIWDLENGE--LMYTLQGHTALVGLLRLSD--K-FLVSAAADGSIRGWDANDYSRKFS 387 (464)
T ss_dssp EETTSCEEEEETTTTE--EEEEECCCSSCEEEEEECS--S-EEEEEETTSEEEEEETTTCCEEEE
T ss_pred EeCCCcEEEEECCCCc--EEEEEeCCCCcEEEEEEcC--C-EEEEEeCCCcEEEEECCCCceeee
Confidence 9999999999999887 6778889999999999984 4 599999999999999998775543
No 96
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.5e-31 Score=261.47 Aligned_cols=261 Identities=15% Similarity=0.212 Sum_probs=205.0
Q ss_pred ceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 194 LCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 194 ~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
.|++|.+. ++ ...++++++.++.|+||++.....+.... ......|...|+++
T Consensus 22 ~~i~~~p~----~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~----------------------~~~~~~~~~~v~~~ 75 (366)
T 3k26_A 22 FGVQFNWH----SKEGDPLVFATVGSNRVTLYECHSQGEIRLLQ----------------------SYVDADADENFYTC 75 (366)
T ss_dssp EEEEECTT----CCTTSCEEEEEEETTEEEEEEECGGGCEEEEE----------------------EEECSCTTCCEEEE
T ss_pred EEEEEecc----cCCCCceEEEECCCCEEEEEEcCCCcEEEeee----------------------eccccCCCCcEEEE
Confidence 67777321 11 35566666667899999997543322111 11122477899999
Q ss_pred EecCCC---CcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcC-CCCcEEEEEECCCcEEEEeCCCCCCccce
Q 010769 273 AWNKEF---RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 273 ~~~~~~---~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 348 (502)
+|+|++ +.+|++|+.||.|++||+.+++.+..+.+|...|.+++|+| ++ .+|++++.||.|++||+++++.....
T Consensus 76 ~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~ 154 (366)
T 3k26_A 76 AWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDTLVAIF 154 (366)
T ss_dssp EEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCeEEEEe
Confidence 999984 24899999999999999999999999999999999999999 55 89999999999999999987765544
Q ss_pred ---EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC-------------------CCCCCccEEEecCCCC
Q 010769 349 ---WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-------------------STSQQSSFTLHAHDKA 406 (502)
Q Consensus 349 ---~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------------------~~~~~~~~~~~~h~~~ 406 (502)
..+...|.+++|+|++. ++++++.||.|++||+++...... ............|...
T Consensus 155 ~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (366)
T 3k26_A 155 GGVEGHRDEVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNY 233 (366)
T ss_dssp CSTTSCSSCEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSC
T ss_pred cccccccCceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcce
Confidence 36888999999999765 899999999999999986521000 0000112233449999
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe------------eEEEEecCCCCCEEEEEEcCC--CCcEEEEEeCCC
Q 010769 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP------------SCIASRNPKAGAVFSVAFSED--SPFVLAIGGSKG 472 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~------------~~~~~~~~~~~~v~~~~~spd--~~~llasg~~dg 472 (502)
|.+++|+ + .+|++++.|+.|++||+.+... ..+..+..|...|++++|+|+ +. +|++|+.||
T Consensus 234 v~~~~~~--~-~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~-~l~~~~~dg 309 (366)
T 3k26_A 234 VDCVRWL--G-DLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQK-MLALGNQVG 309 (366)
T ss_dssp CCEEEEE--T-TEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSS-EEEEECTTS
T ss_pred EEEEEEc--C-CEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCc-EEEEEecCC
Confidence 9999999 4 7999999999999999987653 457777889999999999999 88 599999999
Q ss_pred cEEEEECCCCcccc
Q 010769 473 KLEIWDTLSDAGIS 486 (502)
Q Consensus 473 ~i~vwd~~~~~~~~ 486 (502)
.|++||+.+++.+.
T Consensus 310 ~i~vwd~~~~~~~~ 323 (366)
T 3k26_A 310 KLYVWDLEVEDPHK 323 (366)
T ss_dssp CEEEEECCSSSGGG
T ss_pred cEEEEECCCCCCcc
Confidence 99999999987654
No 97
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.98 E-value=2.1e-30 Score=271.58 Aligned_cols=281 Identities=12% Similarity=0.191 Sum_probs=221.4
Q ss_pred CCCccc-cccccccC--CCceEEEEEecCCcceeEEEEEecC------CCCCCceeeeeccccCCCcceeeeecCCCCCC
Q 010769 136 DEDSED-LEDMTINP--NDAVIVCARNEDDVSHLEVYILEES------DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 136 ~~~~~~-v~~~~~~p--~~~~l~~~~~~~~~~~l~v~~~~~~------~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s 206 (502)
..|... |.+++|+| ++++|++|+.++ .+.||.+... .. .+ .+.-........++.| +
T Consensus 60 ~~h~~~~v~~~~~sp~~~~~~l~s~~~dg---~v~vw~~~~~~~~~~~~~---~~-~~~~~~~~~~v~~~~~-------s 125 (615)
T 1pgu_A 60 TGHGSSVVTTVKFSPIKGSQYLCSGDESG---KVIVWGWTFDKESNSVEV---NV-KSEFQVLAGPISDISW-------D 125 (615)
T ss_dssp CTTTTSCEEEEEECSSTTCCEEEEEETTS---EEEEEEEEEEGGGTEEEE---EE-EEEEECCSSCEEEEEE-------C
T ss_pred ecCCCceEEEEEECcCCCCCEEEEecCCC---EEEEEeCCCCcccccccc---cc-cchhhcccccEEEEEE-------e
Confidence 457888 99999999 999999999876 6788887533 11 11 1110111233467776 7
Q ss_pred CCCCEEEEecCC----CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 207 EKGNFMAVGSME----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 207 ~~~~~la~g~~d----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
|++++|++++.+ +.|++|+.. .....+.+|...|.+++|+|++..+|
T Consensus 126 ~~~~~l~~~~~~~~~~~~v~~~d~~-----------------------------~~~~~~~~~~~~v~~~~~~~~~~~~l 176 (615)
T 1pgu_A 126 FEGRRLCVVGEGRDNFGVFISWDSG-----------------------------NSLGEVSGHSQRINACHLKQSRPMRS 176 (615)
T ss_dssp TTSSEEEEEECCSSCSEEEEETTTC-----------------------------CEEEECCSCSSCEEEEEECSSSSCEE
T ss_pred CCCCEEEEeccCCCCccEEEEEECC-----------------------------CcceeeecCCccEEEEEECCCCCcEE
Confidence 999999999988 789999842 12224457999999999999966689
Q ss_pred EEEecCCcEEEEECCCCeeeEEeccCCC---CeEEEEEcCC-CCcEEEEEECCCcEEEEeCCCCCCccce-E---eecCC
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLEHHTD---KVQAVAWNHH-SPQILLSGSFDRSVVMKDARISTHSGFK-W---AVAAD 354 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~~---~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~---~~~~~ 354 (502)
++|+.|+.|++||+.+++++..+..|.. .|.+++|+|+ + .+|++++.||.|++||+++++..... . .+...
T Consensus 177 ~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~ 255 (615)
T 1pgu_A 177 MTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSG-EFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGG 255 (615)
T ss_dssp EEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTC-CEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSC
T ss_pred EEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCC-CEEEEEeCCCeEEEEECCCCCEeEEecccccccCCc
Confidence 9999999999999999999999999999 9999999999 7 89999999999999999988776644 3 78889
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC----CCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH----DKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|.+++|+ ++ .++++++.+|.|++||+++. ..+..+..+ ...+.++.|. ++ .++++++.++.|+
T Consensus 256 v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 256 IFALSWL-DS-QKFATVGADATIRVWDVTTS---------KCVQKWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLN 322 (615)
T ss_dssp EEEEEES-SS-SEEEEEETTSEEEEEETTTT---------EEEEEEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEE
T ss_pred eEEEEEc-CC-CEEEEEcCCCcEEEEECCCC---------cEEEEEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEE
Confidence 9999999 54 48999999999999999976 566667666 3678888886 55 8999999999999
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
+||+.+++ .+..+..|.+.|.+++| |+ |++++.||.|++|++.
T Consensus 323 ~~d~~~~~--~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~ 365 (615)
T 1pgu_A 323 FYELGHDE--VLKTISGHNKGITALTV-NP----LISGSYDGRIMEWSSS 365 (615)
T ss_dssp EEETTEEE--EEEEECCCSSCEEEEET-TT----TEEEETTSCEEETTTT
T ss_pred EEECCCCc--EEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEEch
Confidence 99998865 45566677777777777 65 4445555555555543
No 98
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.98 E-value=7.2e-31 Score=255.77 Aligned_cols=247 Identities=17% Similarity=0.286 Sum_probs=197.6
Q ss_pred CcceeeeecCCCCCCCCCC-EEEEecC---CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccc
Q 010769 192 FPLCMAWLDCPLKDREKGN-FMAVGSM---EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD 267 (502)
Q Consensus 192 ~~~~~~w~~~~~~~s~~~~-~la~g~~---dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 267 (502)
...+++| +|++. ++++|+. ||.|+||++...... .....+|..
T Consensus 20 ~v~~~~~-------~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~--------------------------~~~~~~~~~ 66 (357)
T 3i2n_A 20 TVFDCKW-------VPCSAKFVTMGNFARGTGVIQLYEIQHGDLK--------------------------LLREIEKAK 66 (357)
T ss_dssp CEEEEEE-------CTTSSEEEEEEC--CCCEEEEEEEECSSSEE--------------------------EEEEEEESS
T ss_pred ceEEEEE-------cCCCceEEEecCccCCCcEEEEEeCCCCccc--------------------------ceeeecccC
Confidence 3478888 78775 5567776 899999999753211 111226889
Q ss_pred ceeeEEecCCC--CcEEEEEecCCcEEEEECCCCe-eeEEeccCCCCeEEEEE------cCCCCcEEEEEECCCcEEEEe
Q 010769 268 SVLGLAWNKEF--RNILASASADKQVKIWDVAAGK-CNLTLEHHTDKVQAVAW------NHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 268 ~V~~l~~~~~~--~~~l~sgs~Dg~v~vwd~~~~~-~~~~~~~h~~~v~~l~~------~~~~~~~l~s~~~dg~i~vwd 338 (502)
.|.+++|+|+. +.+|++|+.||.|++||+.+++ ++..+.+|...|.++.| +|++ .+|++++.||.|++||
T Consensus 67 ~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd 145 (357)
T 3i2n_A 67 PIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWD 145 (357)
T ss_dssp CEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEEC
T ss_pred cEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEe
Confidence 99999999984 4799999999999999999988 88899999999999965 5677 8999999999999999
Q ss_pred CCCCCC-ccceEeec----CCeEEEE----eCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 339 ARISTH-SGFKWAVA----ADVESLA----WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 339 ~~~~~~-~~~~~~~~----~~v~~v~----~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
+++... ......+. ..+.+++ |+|++. ++++++.+|.|++||+++. .. .....|...|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~---------~~-~~~~~~~~~v~~ 214 (357)
T 3i2n_A 146 PRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNM---------AL-RWETNIKNGVCS 214 (357)
T ss_dssp TTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTT---------EE-EEEEECSSCEEE
T ss_pred CCCCCCcceeccccCCCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccC---------ce-eeecCCCCceEE
Confidence 998763 33222333 3788888 677655 8999999999999999976 33 445678999999
Q ss_pred EEEcC---CCCCEEEEEeCCCcEEEEECCCCCeeE---EEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 410 ISYNP---LVPNLLATGSTDKMVKLWDLSNNQPSC---IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 410 l~~sp---~~~~~l~t~s~dg~i~vwd~~~~~~~~---~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++|+| ++ .+|++++.||.|++||+++.++.. ......|...|++++|+|+++.+|++|+.||.|++||+.++.
T Consensus 215 ~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 215 LEFDRKDISM-NKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEESCSSSSC-CEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred EEcCCCCCCC-CEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 99999 76 899999999999999998765322 223458899999999999998669999999999999998765
Q ss_pred c
Q 010769 484 G 484 (502)
Q Consensus 484 ~ 484 (502)
.
T Consensus 294 ~ 294 (357)
T 3i2n_A 294 Q 294 (357)
T ss_dssp C
T ss_pred c
Confidence 3
No 99
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.1e-31 Score=284.36 Aligned_cols=251 Identities=23% Similarity=0.339 Sum_probs=208.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|+.| +|++++|++|+.||.|+||++.... ......+.+|...|++++
T Consensus 13 ~~l~~-------s~dg~~latg~~dg~I~vwd~~~~~-------------------------~~~~~~l~~h~~~V~~l~ 60 (753)
T 3jro_A 13 HDAVL-------DYYGKRLATCSSDKTIKIFEVEGET-------------------------HKLIDTLTGHEGPVWRVD 60 (753)
T ss_dssp EEECC-------CSSSCCEEEEETTTEEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEE
T ss_pred EEEEE-------CCCCCeEEEEECCCcEEEEecCCCC-------------------------CccceeccCCcCceEEEE
Confidence 57766 7899999999999999999986311 223345568999999999
Q ss_pred ecCCC-CcEEEEEecCCcEEEEECCCCe--eeEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCCc--c
Q 010769 274 WNKEF-RNILASASADKQVKIWDVAAGK--CNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS--G 346 (502)
Q Consensus 274 ~~~~~-~~~l~sgs~Dg~v~vwd~~~~~--~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~--~ 346 (502)
|+|+. +++|++|+.||+|++||+.+++ .+..+.+|...|++++|+|+ + .+|++|+.||.|++||++..... .
T Consensus 61 ~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~~~~ 139 (753)
T 3jro_A 61 WAHPKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTTSPI 139 (753)
T ss_dssp ECCTTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCCCCE
T ss_pred ecCCCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCccee
Confidence 98762 4699999999999999999987 77888899999999999999 6 89999999999999999987433 3
Q ss_pred ceEeecCCeEEEEeCCC------------CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC
Q 010769 347 FKWAVAADVESLAWDPH------------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~------------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
....+...|.+++|+|. ++.++++|+.||.|++||+++.... ..+...+.+|..+|++++|+|
T Consensus 140 ~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~-----~~~~~~~~~h~~~V~~l~~sp 214 (753)
T 3jro_A 140 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT-----YVLESTLEGHSDWVRDVAWSP 214 (753)
T ss_dssp EEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTE-----EEEEEEECCCSSCEEEEEECC
T ss_pred EeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCccc-----ceeeeeecCCCCcEEEEEecc
Confidence 34467889999999995 2458999999999999999876210 144567788999999999999
Q ss_pred CC--CCEEEEEeCCCcEEEEECCCCCee---EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 415 LV--PNLLATGSTDKMVKLWDLSNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 415 ~~--~~~l~t~s~dg~i~vwd~~~~~~~---~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++ +.+|++|+.||.|++||+.++... .......|.+.|++++|+|++++ |++|+.||.|++|++.++.
T Consensus 215 ~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~-l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 215 TVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV-LALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp CCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC-EEEECSSSCEECCBCCSSS
T ss_pred CCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCE-EEEEcCCCEEEEEecCCCC
Confidence 93 399999999999999999886421 23334557889999999999995 8999999999999998644
No 100
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=5.5e-30 Score=254.53 Aligned_cols=234 Identities=23% Similarity=0.392 Sum_probs=196.8
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+..+++++.++.|+||++.++.... .....|...|++++|+|+ +.+|++|+.|
T Consensus 103 ~~~l~~~~~d~~v~lw~~~~~~~~~--------------------------~~~~~~~~~v~~v~~s~~-~~~l~~~~~d 155 (401)
T 4aez_A 103 NLNVVAVALERNVYVWNADSGSVSA--------------------------LAETDESTYVASVKWSHD-GSFLSVGLGN 155 (401)
T ss_dssp TTSEEEEEETTEEEEEETTTCCEEE--------------------------EEECCTTCCEEEEEECTT-SSEEEEEETT
T ss_pred CCCEEEEECCCeEEEeeCCCCcEeE--------------------------eeecCCCCCEEEEEECCC-CCEEEEECCC
Confidence 4567888899999999997643221 111248899999999998 6699999999
Q ss_pred CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC-CccceEeecCCeEEEEeCCCCCCE
Q 010769 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~v~~~p~~~~~ 367 (502)
|.|++||+.+++.+..+.+|...|.+++|++ .+|++|+.||.|++||++... .......|...|.+++|+|++. +
T Consensus 156 g~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~ 231 (401)
T 4aez_A 156 GLVDIYDVESQTKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGL-Q 231 (401)
T ss_dssp SCEEEEETTTCCEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSS-E
T ss_pred CeEEEEECcCCeEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCC-E
Confidence 9999999999999999999999999999953 689999999999999999544 3444557889999999999765 8
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe--CCCcEEEEECCCCCeeEEEEe
Q 010769 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--TDKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 368 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~dg~i~vwd~~~~~~~~~~~~ 445 (502)
|++|+.||.|++||+++. .++..+..|...|.+++|+|++..++++++ .|+.|++||+.++++ +..+
T Consensus 232 l~s~~~d~~v~iwd~~~~---------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--~~~~ 300 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSS---------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--VNTV 300 (401)
T ss_dssp EEEEETTSCEEEEETTCS---------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE--EEEE
T ss_pred EEEEeCCCeEEEccCCCC---------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE--EEEE
Confidence 999999999999999986 778888899999999999998878888876 799999999999874 3344
Q ss_pred cCCCCCEEEEEEcCCCCcEEEE--EeCCCcEEEEECCCCcccc
Q 010769 446 NPKAGAVFSVAFSEDSPFVLAI--GGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~llas--g~~dg~i~vwd~~~~~~~~ 486 (502)
. +...|.+++|+|++++ |++ |+.+|.|++|++.++....
T Consensus 301 ~-~~~~v~~~~~s~~~~~-l~~~~g~~dg~i~v~~~~~~~~~~ 341 (401)
T 4aez_A 301 D-AGSQVTSLIWSPHSKE-IMSTHGFPDNNLSIWSYSSSGLTK 341 (401)
T ss_dssp E-CSSCEEEEEECSSSSE-EEEEECTTTCEEEEEEEETTEEEE
T ss_pred e-CCCcEEEEEECCCCCe-EEEEeecCCCcEEEEecCCcccee
Confidence 3 4578999999999996 555 3489999999998865543
No 101
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-29 Score=256.39 Aligned_cols=241 Identities=11% Similarity=0.065 Sum_probs=189.5
Q ss_pred cceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCC--CCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccce
Q 010769 193 PLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLD--VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
+.|++| +|++++| |+|+.||.|+||++. .+.....+ ....|...|
T Consensus 105 v~~~~~-------s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~-------------------------~~~~~~~~v 152 (450)
T 2vdu_B 105 IRNLRL-------TSDESRLIACADSDKSLLVFDVDKTSKNVLKLR-------------------------KRFCFSKRP 152 (450)
T ss_dssp EEEEEE-------CTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEE-------------------------EEEECSSCE
T ss_pred eEEEEE-------cCCCCEEEEEECCCCeEEEEECcCCCCceeeee-------------------------ecccCCCCc
Confidence 456666 8999996 899999999999997 43222110 112467899
Q ss_pred eeEEecCCCCcEEEEEecCCcEEEEECCCCeeeE----EeccCCCCeEEEEEcCC---CCcEEEEEECCCcEEEEeCCCC
Q 010769 270 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNL----TLEHHTDKVQAVAWNHH---SPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~----~~~~h~~~v~~l~~~~~---~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
++++|+|+ +.+|++|+.+|.|++|++.+++... .+.+|...|++++|+|+ + .+|++|+.|+.|++||++++
T Consensus 153 ~~~~~sp~-~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~-~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 153 NAISIAED-DTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGH-QFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSC-EEEEEEETTSCEEEEEESCT
T ss_pred eEEEEcCC-CCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCC-cEEEEEcCCCcEEEEECCCC
Confidence 99999999 5699999999999999998877554 77889999999999999 7 89999999999999999988
Q ss_pred CCccc-eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe--------------------
Q 010769 343 THSGF-KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------------------- 401 (502)
Q Consensus 343 ~~~~~-~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------------------- 401 (502)
..... ...|...|.+++|+ ++. +|++++.|+.|++||++++ ..+..+.
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~-~l~s~~~d~~v~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDY-LLLSAGGDDKIFAWDWKTG---------KNLSTFDYNSLIKPYLNDQHLAPPRFQ 299 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STT-EEEEEESSSEEEEEETTTC---------CEEEEEECHHHHGGGCCTTSBC-----
T ss_pred ceeeeeecCCCCceEEEEEC-CCC-EEEEEeCCCeEEEEECCCC---------cEeeeecchhhhhhhhhhccccccccc
Confidence 76654 33688999999999 654 8999999999999999987 4444443
Q ss_pred -----cCCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEEC--CCC-CeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeC--
Q 010769 402 -----AHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDL--SNN-QPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS-- 470 (502)
Q Consensus 402 -----~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~--~~~-~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~-- 470 (502)
.+...|.+++|+|++ .+|++++ .++.|++|++ ... ....+..+..+ +.|.+++|+|++. ++++++.
T Consensus 300 ~~~~~~~~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~~-~v~~~~~~~ 376 (450)
T 2vdu_B 300 NENNDIIEFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSAHNDEF-QVTLDNKES 376 (450)
T ss_dssp -----CBCCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEETTEE-EEEECCTTC
T ss_pred ccccccceEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEecCCcE-EEEEecccC
Confidence 234679999999988 7888888 8999999999 443 33456666667 8899999999642 3443332
Q ss_pred ----CCcEEEEECCC
Q 010769 471 ----KGKLEIWDTLS 481 (502)
Q Consensus 471 ----dg~i~vwd~~~ 481 (502)
+..|.+|.+..
T Consensus 377 ~~~~~~~i~v~~~~~ 391 (450)
T 2vdu_B 377 SGVQKNFAKFIEYNL 391 (450)
T ss_dssp CSSCCCSEEEEEEET
T ss_pred CCCCCcceEEEEEEc
Confidence 45588888754
No 102
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=3.9e-30 Score=248.95 Aligned_cols=271 Identities=15% Similarity=0.276 Sum_probs=205.1
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceee-eeccccCCCcceeeeecCCCCCCC--CCCEE
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYV-HHHIIIPAFPLCMAWLDCPLKDRE--KGNFM 212 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~w~~~~~~~s~--~~~~l 212 (502)
..|.+.|.+++|+|++++|++|+.++ .++||.+..... .... +.-........|++| +| ++++|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg---~i~iw~~~~~~~---~~~~~~~~~~~~~~v~~~~~-------~~~~d~~~l 74 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQ---HIKVFKLDKDTS---NWELSDSWRAHDSSIVAIDW-------ASPEYGRII 74 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTS---EEEEEEECSSSC---CEEEEEEEECCSSCEEEEEE-------CCGGGCSEE
T ss_pred cccccceeEEEEcCCCCEEEEeeCCC---eEEEEECCCCCC---cceecceeccCCCcEEEEEE-------cCCCCCCEE
Confidence 45889999999999999999999887 667777765432 1111 110112233478888 56 59999
Q ss_pred EEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC-CcEEEEEecCCcE
Q 010769 213 AVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQV 291 (502)
Q Consensus 213 a~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~Dg~v 291 (502)
++|+.||.|+|||+........ .........+.+|...|.+++|+|+. +.+|++|+.||.|
T Consensus 75 ~s~~~dg~v~vwd~~~~~~~~~------------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v 136 (351)
T 3f3f_A 75 ASASYDKTVKLWEEDPDQEECS------------------GRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGIL 136 (351)
T ss_dssp EEEETTSCEEEEEECTTSCTTS------------------SCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEE
T ss_pred EEEcCCCeEEEEecCCCccccc------------------ccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcE
Confidence 9999999999999976432110 01123344556899999999999983 3589999999999
Q ss_pred EEEECCCCeeeEEec-------------cCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCC--ccceEeecCC
Q 010769 292 KIWDVAAGKCNLTLE-------------HHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH--SGFKWAVAAD 354 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~-------------~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~--~~~~~~~~~~ 354 (502)
++||+.+++.+..+. .|...+.+++|+|. .+.+|++++.++.+.+|+...... ......|...
T Consensus 137 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 137 RLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp EEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSC
T ss_pred EEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcc
Confidence 999998876544432 57889999999997 238999999999998888776654 2223357889
Q ss_pred eEEEEeCCCCC---CEEEEEeCCCeEEEEECCCCCCCCC-------------------------------------CCCC
Q 010769 355 VESLAWDPHAE---HSFVVSLEDGTIKGFDIRTAKSDPD-------------------------------------STSQ 394 (502)
Q Consensus 355 v~~v~~~p~~~---~~l~~~~~dg~i~i~d~~~~~~~~~-------------------------------------~~~~ 394 (502)
|.+++|+|++. .+|++++.||.|++||++....... ....
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 99999999873 5899999999999999987421000 0001
Q ss_pred CccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 395 QSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 395 ~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
..+..+.+|...|++++|+|++ .+|++|+.||.|++|++.+++
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTG-TILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTTS
T ss_pred cEEEEEecccccEEEEEEcCCC-CEEEEecCCCcEEEEecCcCc
Confidence 4556677899999999999998 899999999999999999865
No 103
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.6e-30 Score=243.37 Aligned_cols=240 Identities=15% Similarity=0.157 Sum_probs=200.8
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|+.| +++++|++|+.||.|+||++.... ....+..|...|.+++
T Consensus 22 ~~~~~--------~~~~~l~s~~~dg~v~vw~~~~~~---------------------------~~~~~~~~~~~v~~~~ 66 (313)
T 3odt_A 22 RDVVA--------VDDSKVASVSRDGTVRLWSKDDQW---------------------------LGTVVYTGQGFLNSVC 66 (313)
T ss_dssp EEEEE--------EETTEEEEEETTSEEEEEEESSSE---------------------------EEEEEEECSSCEEEEE
T ss_pred EEEEe--------cCCCEEEEEEcCCcEEEEECCCCE---------------------------EEEEeecCCccEEEEE
Confidence 56666 468999999999999999986421 2223446889999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCC---eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 350 (502)
|+|+ +.+|++|+.||.|++|++... +.+..+..|...|.++.|+ + .+|++++.||.|++|| ..........
T Consensus 67 ~~~~-~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~~~~~~~~ 140 (313)
T 3odt_A 67 YDSE-KELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGSLVYNLQA 140 (313)
T ss_dssp EETT-TTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTEEEEEEEC
T ss_pred ECCC-CCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCcEEEeccc
Confidence 9999 669999999999999998754 6677888999999999993 4 7899999999999999 3444444556
Q ss_pred ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 351 ~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
+...+.+++|.|.....+++++.+|.|++||.. .....+.. |...|.+++|+|++ . +++++.||.|
T Consensus 141 ~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-----------~~~~~~~~~~~~~i~~~~~~~~~-~-~~~~~~dg~i 207 (313)
T 3odt_A 141 HNASVWDAKVVSFSENKFLTASADKTIKLWQND-----------KVIKTFSGIHNDVVRHLAVVDDG-H-FISCSNDGLI 207 (313)
T ss_dssp CSSCEEEEEEEETTTTEEEEEETTSCEEEEETT-----------EEEEEECSSCSSCEEEEEEEETT-E-EEEEETTSEE
T ss_pred CCCceeEEEEccCCCCEEEEEECCCCEEEEecC-----------ceEEEEeccCcccEEEEEEcCCC-e-EEEccCCCeE
Confidence 888999999998555689999999999999943 55666666 89999999999987 4 9999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
++||+++++ .+..+..|.+.|++++|+|++. |++++.||.|++||+.+++.+.....+
T Consensus 208 ~i~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~--l~~~~~dg~v~iwd~~~~~~~~~~~~~ 265 (313)
T 3odt_A 208 KLVDMHTGD--VLRTYEGHESFVYCIKLLPNGD--IVSCGEDRTVRIWSKENGSLKQVITLP 265 (313)
T ss_dssp EEEETTTCC--EEEEEECCSSCEEEEEECTTSC--EEEEETTSEEEEECTTTCCEEEEEECS
T ss_pred EEEECCchh--hhhhhhcCCceEEEEEEecCCC--EEEEecCCEEEEEECCCCceeEEEecc
Confidence 999999887 5667778999999999999994 788999999999999999877665444
No 104
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.97 E-value=7.8e-30 Score=249.11 Aligned_cols=284 Identities=12% Similarity=0.151 Sum_probs=204.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEE-EE
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AV 214 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~l-a~ 214 (502)
..|...|.+++|+|++++|++|+.++ ++||..+... .++..+. .. ..++.+ .++++++ ++
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~----~~iw~~~~~~----~~~~~~~---~~-~~~~~~-------~~~~~~~~~~ 76 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKS----FEIYNVHPVA----HIMSQEM---RH-LSKVRM-------LHRTNYVAFV 76 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSE----EEEEEETTEE----EEEEEEC---SC-CCEEEE-------CTTSSEEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCE----EEEEecCCcc----eeeeeec---CC-eEEEEE-------cCCCCEEEEE
Confidence 45888999999999999999987553 5677765332 1221111 11 233444 4556666 56
Q ss_pred ecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 215 GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 215 g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
|+.++.|+|||+.++..+. .+ .|...|.+++|+++ .++++ .++.|++|
T Consensus 77 ~~~d~~v~iWd~~~~~~~~---------------------------~~-~~~~~v~~v~~~~~---~~~~~-~~~~i~i~ 124 (355)
T 3vu4_A 77 TGVKEVVHIWDDVKKQDVS---------------------------RI-KVDAPVKDLFLSRE---FIVVS-YGDVISVF 124 (355)
T ss_dssp CSSTTEEEEEETTTTEEEE---------------------------EE-ECSSCEEEEEECSS---EEEEE-ETTEEEEE
T ss_pred ECCccEEEEEECCCCcEEE---------------------------EE-ECCCceEEEEEcCC---EEEEE-EcCEEEEE
Confidence 8888999999987533221 11 25678999999987 34444 47899999
Q ss_pred ECCCC-eeeEEeccCCCCeEEEEEcCCCCcEEEE-EECCCcEEEEeCCCCC----------------CccceEeecCCeE
Q 010769 295 DVAAG-KCNLTLEHHTDKVQAVAWNHHSPQILLS-GSFDRSVVMKDARIST----------------HSGFKWAVAADVE 356 (502)
Q Consensus 295 d~~~~-~~~~~~~~h~~~v~~l~~~~~~~~~l~s-~~~dg~i~vwd~~~~~----------------~~~~~~~~~~~v~ 356 (502)
|+.++ +.+..+.. +...+++++ . .++++ |+.+|.|++||+++.. .......|...|.
T Consensus 125 d~~~~~~~~~~~~~---~~~~~~~s~-~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~ 199 (355)
T 3vu4_A 125 KFGNPWKRITDDIR---FGGVCEFSN-G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIK 199 (355)
T ss_dssp ESSTTCCBSSCCEE---EEEEEEEET-T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEE
T ss_pred ECCCCceeeEEecc---CCceEEEEc-c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceE
Confidence 99988 77766654 455566666 2 33333 6899999999999755 1344567889999
Q ss_pred EEEeCCCCCCEEEEEeCCCe-EEEEECCCCCCCCCCCCCCccEEEe-c-CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 357 SLAWDPHAEHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSSFTLH-A-HDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 357 ~v~~~p~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~-~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
+++|+|++. +|++|+.||+ |++||++++ ..+..+. + |...|++++|+|++ .+|++++.|++|++||
T Consensus 200 ~~~~s~~g~-~l~s~s~d~~~v~iwd~~~~---------~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~ 268 (355)
T 3vu4_A 200 MVRLNRKSD-MVATCSQDGTIIRVFKTEDG---------VLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFE 268 (355)
T ss_dssp EEEECTTSS-EEEEEETTCSEEEEEETTTC---------CEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEE
T ss_pred EEEECCCCC-EEEEEeCCCCEEEEEECCCC---------cEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEE
Confidence 999999865 8999999998 999999987 6777787 5 99999999999998 9999999999999999
Q ss_pred CCCCCeeEEEE--------------------e-cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 434 LSNNQPSCIAS--------------------R-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 434 ~~~~~~~~~~~--------------------~-~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
+.......... + .........++|++++. .|++++.||.+++|++..+....+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~-~l~~~~~dg~~~~~~~~~~~~~~~ 342 (355)
T 3vu4_A 269 IFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS-LVVVWPHTRMIETFKVVFDDEMER 342 (355)
T ss_dssp SSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE-EEEEETTTTEEEEEEEEEETTTTE
T ss_pred ccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCC-EEEEEeCCCeEEEEEEEcCCCCce
Confidence 97653211111 1 11122346789999998 488899999999999987665443
No 105
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=8.6e-29 Score=247.47 Aligned_cols=253 Identities=23% Similarity=0.428 Sum_probs=207.5
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..+++| |+ +++||+|. |++|+|||+.++.... ...+.+|...|++|
T Consensus 108 ~~~l~w-------S~-~n~lAvgl-d~tV~lWd~~tg~~~~-------------------------~~~~~~~~~~V~sv 153 (420)
T 4gga_A 108 LNLVDW-------SS-GNVLAVAL-DNSVYLWSASSGDILQ-------------------------LLQMEQPGEYISSV 153 (420)
T ss_dssp CBCEEE-------CT-TSEEEEEE-TTEEEEEETTTCCEEE-------------------------EEECCSTTCCEEEE
T ss_pred ceeEEE-------CC-CCEEEEEe-CCEEEEEECCCCCEEE-------------------------EEEecCCCCcEEEE
Confidence 346777 54 46888886 8999999998654322 12344788999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc-cceEee
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~ 351 (502)
+|+|+ +.+||+|+.||+|+|||+.+++++..+.+|...+.++.|++ .+|++|+.|+.+++||.+..... .....|
T Consensus 154 ~fspd-g~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h 229 (420)
T 4gga_A 154 AWIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGH 229 (420)
T ss_dssp EECTT-SSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECC
T ss_pred EECCC-CCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccceeeEEeccc
Confidence 99999 56999999999999999999999999999999999999864 68999999999999999876554 334567
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE--eCCCcE
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG--STDKMV 429 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~--s~dg~i 429 (502)
...+..+.|+|.+. ++++++.||.|++|+....... ...+.....|...|.+++|+|.++.+++++ +.|++|
T Consensus 230 ~~~~~~~~~~~~g~-~l~s~~~D~~v~i~~~~~~~~~-----~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I 303 (420)
T 4gga_A 230 SQEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHI 303 (420)
T ss_dssp SSCEEEEEECTTSS-EEEEEETTSCEEEEESSCCSSC-----SCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEE
T ss_pred ccceeeeeecCCCC-eeeeeeccccceEEeecccccc-----ceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEE
Confidence 88999999999876 8999999999999999876321 245677888999999999999887888765 479999
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCccccccccCC
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~-~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
++||+.+++ +...+..+ ..+.++.|+|++..++++++ .|+.|+|||+.+++++..+.+|.
T Consensus 304 ~iwd~~t~~--~~~~~~~~-~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 304 RIWNVCSGA--CLSAVDAH-SQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp EEEETTTTE--EEEEEECS-SCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred EEEeCCccc--cceeeccc-cceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 999999987 34444444 57999999999997554433 68999999999999988776654
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=3.7e-29 Score=251.30 Aligned_cols=224 Identities=27% Similarity=0.484 Sum_probs=195.8
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
.++++|++|+.||.|+|||+.+.. ....+.+|...|++++| + +.+|++|+
T Consensus 141 ~d~~~l~~g~~dg~i~iwd~~~~~---------------------------~~~~~~~h~~~v~~l~~--~-~~~l~sg~ 190 (435)
T 1p22_A 141 YDDQKIVSGLRDNTIKIWDKNTLE---------------------------CKRILTGHTGSVLCLQY--D-ERVIITGS 190 (435)
T ss_dssp CCSSEEEEEESSSCEEEEESSSCC---------------------------EEEEECCCSSCEEEEEC--C-SSEEEEEE
T ss_pred ECCCEEEEEeCCCeEEEEeCCCCe---------------------------EEEEEcCCCCcEEEEEE--C-CCEEEEEc
Confidence 379999999999999999987532 22345589999999999 3 45999999
Q ss_pred cCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc---cceEeecCCeEEEEeCCC
Q 010769 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS---GFKWAVAADVESLAWDPH 363 (502)
Q Consensus 287 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~---~~~~~~~~~v~~v~~~p~ 363 (502)
.||+|++||+.+++++..+.+|...|.+++|++ .+|++|+.||.|++||+++.... .....|...|.+++|+
T Consensus 191 ~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~-- 265 (435)
T 1p22_A 191 SDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFD-- 265 (435)
T ss_dssp TTSCEEEEESSSCCEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEE--
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeC--
Confidence 999999999999999999999999999999974 58999999999999999987765 3344678899999993
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010769 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+.++++|+.||.|++||+++. ..+..+.+|...|.+++|+ + .+|++|+.||.|++||+++++ ++.
T Consensus 266 -~~~l~s~~~dg~i~vwd~~~~---------~~~~~~~~~~~~v~~~~~~--~-~~l~~g~~dg~i~iwd~~~~~--~~~ 330 (435)
T 1p22_A 266 -DKYIVSASGDRTIKVWNTSTC---------EFVRTLNGHKRGIACLQYR--D-RLVVSGSSDNTIRLWDIECGA--CLR 330 (435)
T ss_dssp -TTEEEEEETTSEEEEEETTTC---------CEEEEEECCSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTCC--EEE
T ss_pred -CCEEEEEeCCCeEEEEECCcC---------cEEEEEcCCCCcEEEEEeC--C-CEEEEEeCCCeEEEEECCCCC--EEE
Confidence 348999999999999999986 7788899999999999996 3 799999999999999999987 577
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
.+.+|...|.+++| ++. +|++|+.||.|++||+.++.
T Consensus 331 ~~~~h~~~v~~~~~--~~~-~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 331 VLEGHEELVRCIRF--DNK-RIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp EECCCSSCEEEEEC--CSS-EEEEEETTSCEEEEEHHHHT
T ss_pred EEeCCcCcEEEEEe--cCC-EEEEEeCCCcEEEEECCCCC
Confidence 78889999999999 566 59999999999999997765
No 107
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=245.76 Aligned_cols=232 Identities=6% Similarity=0.032 Sum_probs=180.4
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
.+++++|++|+.||.|++||+..+..+.. + ....|.++.|+|. +++|
T Consensus 45 ~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~---------------------------~--~~~~v~~~~~~~~----~~s~ 91 (343)
T 3lrv_A 45 YYDKWVCMCRCEDGALHFTQLKDSKTITT---------------------------I--TTPNPRTGGEHPA----IISR 91 (343)
T ss_dssp SEEEEEEEEEEETTEEEEEEESSSSCEEE---------------------------E--EEECCCTTCCCCS----EEEE
T ss_pred cCCCCEEEEECCCCcEEEEECCCCcEEEE---------------------------E--ecCCceeeeeCCc----eEEe
Confidence 46799999999999999999976433221 1 1466888889887 8999
Q ss_pred ecCCcEEEEECC---------CCeeeEEec-cCCCCeEEEEEcC--CCCcEEEEEECCCcEEEEeCCCCCCccce-Eeec
Q 010769 286 SADKQVKIWDVA---------AGKCNLTLE-HHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFK-WAVA 352 (502)
Q Consensus 286 s~Dg~v~vwd~~---------~~~~~~~~~-~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~~ 352 (502)
+.|++|++|+.. +++.+..+. .|...|.+++|+| ++ .+|++++.||+|++||+++++..... ..+.
T Consensus 92 s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~ 170 (343)
T 3lrv_A 92 GPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQYIVHSAKSD 170 (343)
T ss_dssp CSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCEEEEECCCSS
T ss_pred cCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcEEEEEecCCC
Confidence 999999999665 555455543 6778999999999 88 89999999999999999988764332 2345
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCcc-EEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS-FTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
..+.+++|+|++. ++++|+.||.|++||+++. ..+ ..+.. |..+|++++|+|++ .+|++++ ++.|+
T Consensus 171 ~~i~~~~~~pdg~-~lasg~~dg~i~iwd~~~~---------~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~ 238 (343)
T 3lrv_A 171 VEYSSGVLHKDSL-LLALYSPDGILDVYNLSSP---------DQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVV 238 (343)
T ss_dssp CCCCEEEECTTSC-EEEEECTTSCEEEEESSCT---------TSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEE
T ss_pred CceEEEEECCCCC-EEEEEcCCCEEEEEECCCC---------CCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEE
Confidence 5799999999875 8999999999999999987 334 67777 99999999999998 8999999 55999
Q ss_pred EEECCCCCeeE-EEEecCCCCCE--EEEEEcCCCCcEEEEEeC-CCcEEEEECCCCcc
Q 010769 431 LWDLSNNQPSC-IASRNPKAGAV--FSVAFSEDSPFVLAIGGS-KGKLEIWDTLSDAG 484 (502)
Q Consensus 431 vwd~~~~~~~~-~~~~~~~~~~v--~~~~~spd~~~llasg~~-dg~i~vwd~~~~~~ 484 (502)
+||+++.+... +..+..|...+ .+++|+|++++ |++++. ++.|+||++.+...
T Consensus 239 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-l~~~s~~d~~i~v~~~~~~~~ 295 (343)
T 3lrv_A 239 CFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSGKN-MIAYSNESNSLTIYKFDKKTK 295 (343)
T ss_dssp EEETTSSTTCBSSCCCBC-----CCEEEEECTTSSE-EEEEETTTTEEEEEEECTTTC
T ss_pred EEEcCCCCcceeecccccccccccceEEEECCCCCE-EEEecCCCCcEEEEEEccccc
Confidence 99999876321 11112233333 46999999996 777777 99999999976554
No 108
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.3e-29 Score=250.76 Aligned_cols=207 Identities=15% Similarity=0.096 Sum_probs=173.0
Q ss_pred CCcccceeeEEecCCCCcEEEEEecCCcEEEEECC--CCeeeEEec--cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEe
Q 010769 263 GSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 263 ~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~--~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 338 (502)
.+|...|++++|+|++..++++|+.||+|+|||+. +++++..+. .|...|++++|+|++ .+|++|+.+|.|++|+
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDD-TTVIIADKFGDVYSID 177 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCC-CEEEEEeCCCcEEEEe
Confidence 46788999999999955445999999999999999 888888875 567899999999999 8999999999999999
Q ss_pred CCCCCCcc----ceEeecCCeEEEEeCCC--CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEE-EecCCCCeeEEE
Q 010769 339 ARISTHSG----FKWAVAADVESLAWDPH--AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT-LHAHDKAVCTIS 411 (502)
Q Consensus 339 ~~~~~~~~----~~~~~~~~v~~v~~~p~--~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~h~~~v~~l~ 411 (502)
+....... ....|...|.+++|+|+ +..+|++++.|+.|++||+++. ..+.. +.+|...|.+++
T Consensus 178 ~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~---------~~~~~~~~~h~~~v~~~~ 248 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC---------FIVDKWLFGHKHFVSSIC 248 (450)
T ss_dssp TTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT---------TCEEEECCCCSSCEEEEE
T ss_pred cCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC---------ceeeeeecCCCCceEEEE
Confidence 98876543 56678899999999997 2348999999999999999876 45555 568999999999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec-----------------------CCCCCEEEEEEcCCCCcEEEEE
Q 010769 412 YNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN-----------------------PKAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 412 ~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~-----------------------~~~~~v~~~~~spd~~~llasg 468 (502)
|+ ++ .+|++++.|+.|++||+.+++........ .....|.+++|+|++++ |+++
T Consensus 249 ~s-d~-~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~-l~~~ 325 (450)
T 2vdu_B 249 CG-KD-YLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF-VAFF 325 (450)
T ss_dssp EC-ST-TEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE-EEEE
T ss_pred EC-CC-CEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE-EEEE
Confidence 99 76 99999999999999999998854333321 23457999999999996 5555
Q ss_pred e-CCCcEEEEEC--CCC
Q 010769 469 G-SKGKLEIWDT--LSD 482 (502)
Q Consensus 469 ~-~dg~i~vwd~--~~~ 482 (502)
+ .++.|+||++ .++
T Consensus 326 ~~~d~~i~iw~~~~~~~ 342 (450)
T 2vdu_B 326 VEATKCIIILEMSEKQK 342 (450)
T ss_dssp ETTCSEEEEEEECSSST
T ss_pred ECCCCeEEEEEeccCCC
Confidence 5 8999999999 554
No 109
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-29 Score=251.68 Aligned_cols=264 Identities=9% Similarity=0.067 Sum_probs=198.1
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
-...|.+++|+|+|++||+|+.++ +++ +.... ..+..|.. ...++++ +|+| .
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~---TV~----d~~~~--~~l~gh~~-----~v~~V~F-------sPdg-------~ 65 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDI---SIG----QPKYA--KDINCNSK-----NLFHVKE-------FPLE-------F 65 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSE---EEE----EECCC--SCCSSBGG-----GTEEEEE-------ECCC-------C
T ss_pred hhccEEEEEECCCCCEEEEEcCCc---eee----ccccc--ceecCCCc-----cEEEEEE-------CCCC-------C
Confidence 357899999999999999999886 333 22221 12222222 2245555 6777 4
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
++.+.+|+... .. ...+ .|...|.+++|+|+ +.+||+++.||+|++|+..
T Consensus 66 ~~~~~~~~~~~---~~-------------------------~~~~-~~~~~V~~vawSPd-G~~LAs~s~dg~V~iwd~~ 115 (588)
T 2j04_A 66 ENKLDFELAQQ---NG-------------------------LLNS-QPVCYPRVCKPSPI-DDWMAVLSNNGNVSVFKDN 115 (588)
T ss_dssp CCTTTTSCCCS---SC-------------------------SSTT-SCSCCEEEEEECSS-SSCEEEEETTSCEEEEETT
T ss_pred cceEEEEeCCC---ce-------------------------Eeec-CCCCcEEEEEECCC-CCEEEEEeCCCcEEEEeCC
Confidence 55555554331 11 1111 45789999999999 5699999999999999954
Q ss_pred CCeeeEEeccCCC-----CeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC-------ccce----EeecCCeEEEEeC
Q 010769 298 AGKCNLTLEHHTD-----KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH-------SGFK----WAVAADVESLAWD 361 (502)
Q Consensus 298 ~~~~~~~~~~h~~-----~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~-------~~~~----~~~~~~v~~v~~~ 361 (502)
. ++..+. |.. .|.+++|+|+| ++|++|+.||+|++||+..+.. .... .+|...|.+++|+
T Consensus 116 ~--~l~~l~-~~~~~~~~sv~svafSPDG-~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawS 191 (588)
T 2j04_A 116 K--MLTNLD-SKGNLSSRTYHCFEWNPIE-SSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWY 191 (588)
T ss_dssp E--EEEECC-CSSCSTTTCEEEEEECSSS-SCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEE
T ss_pred c--eeeecc-CCCccccccEEEEEEcCCC-CEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEc
Confidence 4 666677 665 59999999999 9999999999999999998753 1111 2345689999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 362 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 362 p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
|++ +++++.|+.|++|++..... .....++ .+|...|.+++|+ + ..||+++ +++|++||+.+++.
T Consensus 192 Pdg---Laass~D~tVrlWd~~~~~~------~~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~~~- 257 (588)
T 2j04_A 192 EDV---LVAALSNNSVFSMTVSASSH------QPVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNYSI- 257 (588)
T ss_dssp TTE---EEEEETTCCEEEECCCSSSS------CCCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTTEE-
T ss_pred CCc---EEEEeCCCeEEEEECCCCcc------ccceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCCeE-
Confidence 976 78888999999999987621 0123456 4788999999999 5 7888887 69999999998763
Q ss_pred EEEEecCCCCCEEEEEE--cCCCCcEEEEEeCCCcEEEEECC
Q 010769 441 CIASRNPKAGAVFSVAF--SEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~--spd~~~llasg~~dg~i~vwd~~ 480 (502)
.....+|.+.|..++| +|++. .|++++.+|+ ++|...
T Consensus 258 -~~~~~gh~~~V~~va~~~s~d~~-~La~a~edG~-klw~~d 296 (588)
T 2j04_A 258 -SSLKTGSLENFHIIPLNHEKEST-ILLMSNKTSY-KVLLED 296 (588)
T ss_dssp -EEEECSCCSCCCEEEETTCSSCE-EEEECSSCEE-EEEESS
T ss_pred -EEEEcCCCceEEEEEeeeCCCCC-EEEEEcCCCC-EEEeec
Confidence 2233379999999999 99998 6999999999 999985
No 110
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.7e-29 Score=241.82 Aligned_cols=282 Identities=9% Similarity=0.041 Sum_probs=198.7
Q ss_pred ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEE
Q 010769 143 EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIE 222 (502)
Q Consensus 143 ~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~ 222 (502)
....+.+++++|++|+.++ .+++|.+.... .+..... ..+.++.| +|. +++|+.|+.|+
T Consensus 40 ~~~~~~~d~~~l~sg~~Dg---~v~iwd~~~~~----~~~~~~~----~~v~~~~~-------~~~---~~s~s~D~~i~ 98 (343)
T 3lrv_A 40 LNKSMYYDKWVCMCRCEDG---ALHFTQLKDSK----TITTITT----PNPRTGGE-------HPA---IISRGPCNRLL 98 (343)
T ss_dssp ECSSSSEEEEEEEEEEETT---EEEEEEESSSS----CEEEEEE----ECCCTTCC-------CCS---EEEECSTTEEE
T ss_pred hhhhhcCCCCEEEEECCCC---cEEEEECCCCc----EEEEEec----CCceeeee-------CCc---eEEecCCCeEE
Confidence 3446668899999999998 55666665443 2222221 11233333 555 99999999999
Q ss_pred EeeCCCCCCCCceeeeCCcchhhhhhccccCCccc-cccccCCcccceeeEEecC--CCCcEEEEEecCCcEEEEECCCC
Q 010769 223 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSS-IKYKKGSHTDSVLGLAWNK--EFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 223 iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~h~~~V~~l~~~~--~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
+|+........ . ..... ......+|...|.+++|+| + +.+|++|+.||+|++||+.++
T Consensus 99 ~w~~~~~~~~~-----~-------------~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~~~l~s~s~dg~i~~wd~~~~ 159 (343)
T 3lrv_A 99 LLYPGNQITIL-----D-------------SKTNKVLREIEVDSANEIIYMYGHNEVN-TEYFIWADNRGTIGFQSYEDD 159 (343)
T ss_dssp EEETTTEEEEE-----E-------------TTTCCEEEEEECCCSSCEEEEECCC----CCEEEEEETTCCEEEEESSSS
T ss_pred EEEccCceEEe-----e-------------cCCcceeEEeecCCCCCEEEEEcCCCCC-CCEEEEEeCCCcEEEEECCCC
Confidence 99886311000 0 00011 1122336778999999999 8 569999999999999999999
Q ss_pred eeeEEec-cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc-cceEe-ecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 300 KCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWA-VAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 300 ~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~-~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
+++..+. .|...|.+++|+|++ .+|++|+.||.|++||++++... ..... |...|.+++|+|++. ++++++ ++.
T Consensus 160 ~~~~~~~~~~~~~i~~~~~~pdg-~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~-~l~s~~-~~~ 236 (343)
T 3lrv_A 160 SQYIVHSAKSDVEYSSGVLHKDS-LLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGY-WMVVEC-DQT 236 (343)
T ss_dssp CEEEEECCCSSCCCCEEEECTTS-CEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSS-EEEEEE-SSB
T ss_pred cEEEEEecCCCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCC-EEEEEe-CCe
Confidence 9877663 456689999999999 89999999999999999998876 33444 789999999999875 788888 559
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCCCCee--EEEEcCCCCCEEEEEeC-CCcEEEEECCCCCeeEEEEecCCCCCEE
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC--TISYNPLVPNLLATGST-DKMVKLWDLSNNQPSCIASRNPKAGAVF 453 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~--~l~~sp~~~~~l~t~s~-dg~i~vwd~~~~~~~~~~~~~~~~~~v~ 453 (502)
|++||+++.... ..+..+..|...+. +++|+|++ .+|++++. |+.|++|++....... .. .++.
T Consensus 237 v~iwd~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~~~~~--~~----~~~~ 303 (343)
T 3lrv_A 237 VVCFDLRKDVGT------LAYPTYTIPEFKTGTVTYDIDDSG-KNMIAYSNESNSLTIYKFDKKTKNW--TK----DEES 303 (343)
T ss_dssp EEEEETTSSTTC------BSSCCCBC-----CCEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCSE--EE----EEEE
T ss_pred EEEEEcCCCCcc------eeecccccccccccceEEEECCCC-CEEEEecCCCCcEEEEEEcccccce--Ee----cCce
Confidence 999999987321 11222222444444 69999998 89999888 9999999997654221 11 5677
Q ss_pred EEEEcC---CCCcEEEEEeCCCcEEEEECCC
Q 010769 454 SVAFSE---DSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 454 ~~~~sp---d~~~llasg~~dg~i~vwd~~~ 481 (502)
.++|.| +... |++++.+|.+.++-...
T Consensus 304 ~~~~~~~~~~~~~-l~~~~~d~~~~~~~~~~ 333 (343)
T 3lrv_A 304 ALCLQSDTADFTD-MDVVCGDGGIAAILKTN 333 (343)
T ss_dssp ECCC----CCCCE-EEEEEETTEEEEEEECS
T ss_pred eEecCccccccce-eEEEecCCceEEEEecC
Confidence 888988 7774 77888899888876543
No 111
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.9e-28 Score=241.70 Aligned_cols=275 Identities=17% Similarity=0.191 Sum_probs=205.7
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
..|++| +| ++++||+|+.||.|+||++.............. .........+|...|.+
T Consensus 46 v~~~~~-------s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~v~~ 104 (408)
T 4a11_B 46 INTLDI-------EPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAV--------------CSIGRDHPDVHRYSVET 104 (408)
T ss_dssp EEEEEE-------CTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEE--------------EEECTTCTTCCSSCEEE
T ss_pred EEEEEE-------ecCCCCEEEEEcCCCeEEEEECCCCcccceEecccc--------------ccccccccccCCCcEEE
Confidence 378887 78 899999999999999999987554433211000 00011123469999999
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCC--cEEEEEECCCcEEEEeCCCCCCccceE
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSP--QILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~ 349 (502)
++|+|+++.+|++|+.||.|++||+.+++.+..+. +...+.++.|++.+. .++++++.+|.|++||++++.......
T Consensus 105 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~ 183 (408)
T 4a11_B 105 VQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ 183 (408)
T ss_dssp EEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC
T ss_pred EEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec
Confidence 99999657799999999999999999999888887 788899999998652 499999999999999999888777666
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC-------CCCCCccEEEecCCCCeeEEEEcCCCCCEEEE
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD-------STSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~-------~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
.+...|.+++|+|++..++++++.+|.|++||+++...... ............|...|.+++|+|++ .+|++
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~ 262 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDG-LHLLT 262 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTS-SEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCC-CEEEE
Confidence 78899999999999887899999999999999987631000 00011122226789999999999988 89999
Q ss_pred EeCCCcEEEEECCCCCeeEEEEec---CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccC
Q 010769 423 GSTDKMVKLWDLSNNQPSCIASRN---PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~~~~~---~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
++.||.|++||+.+++........ .....+........+. .+++++.++.|++||+.+++.+....++
T Consensus 263 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~v~d~~~~~~~~~~~~~ 333 (408)
T 4a11_B 263 VGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSS-EFVFVPYGSTIAVYTVYSGEQITMLKGH 333 (408)
T ss_dssp EETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSS-CEEEEEETTEEEEEETTTCCEEEEECCC
T ss_pred ecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCc-eEEEEecCCEEEEEECcCCcceeeeccC
Confidence 999999999999987642221111 1111121122222333 3666788999999999999888766544
No 112
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.97 E-value=3.7e-28 Score=240.14 Aligned_cols=279 Identities=13% Similarity=0.113 Sum_probs=207.9
Q ss_pred ceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCCCCC
Q 010769 152 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLDVID 230 (502)
Q Consensus 152 ~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~~~~ 230 (502)
.++++++.++ .|++|+...........+| ..+.+++| +|++++| ++++.++.|++||+.++.
T Consensus 3 ~l~vs~~~d~-----~v~v~d~~~~~~~~~~~~~-----~~~~~~~~-------s~dg~~l~~~~~~d~~i~v~d~~~~~ 65 (391)
T 1l0q_A 3 FAYIANSESD-----NISVIDVTSNKVTATIPVG-----SNPMGAVI-------SPDGTKVYVANAHSNDVSIIDTATNN 65 (391)
T ss_dssp EEEEEETTTT-----EEEEEETTTTEEEEEEECS-----SSEEEEEE-------CTTSSEEEEEEGGGTEEEEEETTTTE
T ss_pred EEEEEcCCCC-----EEEEEECCCCeEEEEeecC-----CCcceEEE-------CCCCCEEEEECCCCCeEEEEECCCCe
Confidence 4566666665 5555554443111111222 33567777 7899876 677789999999997533
Q ss_pred CCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCC
Q 010769 231 EVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTD 310 (502)
Q Consensus 231 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~ 310 (502)
... .+..| ..|.+++|+|++..++++++.++.|++||+.+++.+..+..| .
T Consensus 66 ~~~---------------------------~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~-~ 116 (391)
T 1l0q_A 66 VIA---------------------------TVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTG-K 116 (391)
T ss_dssp EEE---------------------------EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECS-S
T ss_pred EEE---------------------------EEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCC-C
Confidence 211 11223 389999999996655567777899999999999998888754 5
Q ss_pred CeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC
Q 010769 311 KVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD 390 (502)
Q Consensus 311 ~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~ 390 (502)
.+.+++|+|++..++++++.++.|++||+++++... .......+.+++|+|++..++++++.++.|++||+++.
T Consensus 117 ~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~----- 190 (391)
T 1l0q_A 117 SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVIN-TVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTN----- 190 (391)
T ss_dssp SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTT-----
T ss_pred CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE-EEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCC-----
Confidence 789999999994455788889999999998876554 34445678999999998766678889999999999876
Q ss_pred CCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe---CCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEE
Q 010769 391 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS---TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s---~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llas 467 (502)
.....+. +...+.+++|+|++ .+|++++ .++.|++||+.+++. +..+..+ ..+.+++|+|++++++++
T Consensus 191 ----~~~~~~~-~~~~~~~~~~~~~g-~~l~~~~~~~~~~~v~~~d~~~~~~--~~~~~~~-~~~~~~~~s~dg~~l~~s 261 (391)
T 1l0q_A 191 ----SVIDTVK-VEAAPSGIAVNPEG-TKAYVTNVDKYFNTVSMIDTGTNKI--TARIPVG-PDPAGIAVTPDGKKVYVA 261 (391)
T ss_dssp ----EEEEEEE-CSSEEEEEEECTTS-SEEEEEEECSSCCEEEEEETTTTEE--EEEEECC-SSEEEEEECTTSSEEEEE
T ss_pred ----eEEEEEe-cCCCccceEECCCC-CEEEEEecCcCCCcEEEEECCCCeE--EEEEecC-CCccEEEEccCCCEEEEE
Confidence 4444444 56688999999998 6677666 789999999998874 4444444 358899999999977788
Q ss_pred EeCCCcEEEEECCCCccccccccC
Q 010769 468 GGSKGKLEIWDTLSDAGISNRFSK 491 (502)
Q Consensus 468 g~~dg~i~vwd~~~~~~~~~~~~~ 491 (502)
++.++.|++||+.+++.+.....+
T Consensus 262 ~~~d~~v~v~d~~~~~~~~~~~~~ 285 (391)
T 1l0q_A 262 LSFXNTVSVIDTATNTITATMAVG 285 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECS
T ss_pred cCCCCEEEEEECCCCcEEEEEECC
Confidence 889999999999998877655433
No 113
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.8e-29 Score=243.69 Aligned_cols=213 Identities=24% Similarity=0.366 Sum_probs=183.7
Q ss_pred ccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC--CCeeeEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEE
Q 010769 261 KKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVM 336 (502)
Q Consensus 261 ~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~--~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~v 336 (502)
.+.+|...|++++|+|+ +.+|++|+.||.|+||++. +++.+..+.+|...|++++|++. + .+|++++.||.|++
T Consensus 6 ~~~~h~~~v~~~~~s~~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~i 83 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYY-GKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYDGKVLI 83 (379)
T ss_dssp CEEECCCCEEEEEECSS-SSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSCEEE
T ss_pred EecCCcccEEEEEEcCC-CCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCC-CEEEEeccCCEEEE
Confidence 45689999999999999 5699999999999999998 66778889999999999999877 6 89999999999999
Q ss_pred EeCCCCC--CccceEeecCCeEEEEeCCCC-CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEc
Q 010769 337 KDARIST--HSGFKWAVAADVESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN 413 (502)
Q Consensus 337 wd~~~~~--~~~~~~~~~~~v~~v~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 413 (502)
||+++.. .......+...|.+++|+|+. ..++++++.+|.|++||++.... .....+..|...|.+++|+
T Consensus 84 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~-------~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 84 WKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT-------TSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp EEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC-------CCEEEEECCTTCEEEEEEC
T ss_pred EEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc-------eeeEEecCCCCceEEEEEc
Confidence 9999876 334344578899999999982 34899999999999999987631 4455678899999999999
Q ss_pred CC------------CCCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCCEEEEEEcCC---CCcEEEEEeCCCcEEE
Q 010769 414 PL------------VPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSED---SPFVLAIGGSKGKLEI 476 (502)
Q Consensus 414 p~------------~~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd---~~~llasg~~dg~i~v 476 (502)
|. .+.+|++++.|+.|++||++.... .....+..|...|.+++|+|+ +. +|++++.||.|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~dg~i~i 235 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRS-YLASVSQDRTCII 235 (379)
T ss_dssp CCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSE-EEEEEETTSCEEE
T ss_pred CccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCC-eEEEEeCCCEEEE
Confidence 94 238999999999999999987653 355677889999999999999 66 6999999999999
Q ss_pred EECCCCc
Q 010769 477 WDTLSDA 483 (502)
Q Consensus 477 wd~~~~~ 483 (502)
||+.++.
T Consensus 236 wd~~~~~ 242 (379)
T 3jrp_A 236 WTQDNEQ 242 (379)
T ss_dssp EEESSTT
T ss_pred EeCCCCC
Confidence 9999864
No 114
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=9.9e-29 Score=241.34 Aligned_cols=251 Identities=19% Similarity=0.308 Sum_probs=196.9
Q ss_pred cceeeeecCCCCCCCC---CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccce
Q 010769 193 PLCMAWLDCPLKDREK---GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~---~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
..|++| +|+ |++|++|+.||.|+||++.... ......+.+|...|
T Consensus 42 v~~~~~-------~~~~~~g~~l~~~~~dg~i~iw~~~~~~-------------------------~~~~~~~~~h~~~v 89 (368)
T 3mmy_A 42 IGCLSF-------SPPTLPGNFLIAGSWANDVRCWEVQDSG-------------------------QTIPKAQQMHTGPV 89 (368)
T ss_dssp EEEEEE-------CCTTSSSEEEEEEETTSEEEEEEECTTS-------------------------CEEEEEEEECSSCE
T ss_pred eEEEEE-------cCCCCCceEEEEECCCCcEEEEEcCCCC-------------------------ceeEEEeccccCCE
Confidence 378888 677 6999999999999999997421 11223445799999
Q ss_pred eeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEE--cCCCCcEEEEEECCCcEEEEeCCCCCCccc
Q 010769 270 LGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
++++|+|+ +.+|++|+.||.|++||+.+++.+. +..|...|.+++| +|++ .+|++++.||.|++||+++.+...
T Consensus 90 ~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~~- 165 (368)
T 3mmy_A 90 LDVCWSDD-GSKVFTASCDKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSNPMM- 165 (368)
T ss_dssp EEEEECTT-SSEEEEEETTSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSSCSE-
T ss_pred EEEEECcC-CCEEEEEcCCCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCcEEE-
Confidence 99999998 6699999999999999999998776 4569999999999 8888 899999999999999999887665
Q ss_pred eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCC---CCEEEEE
Q 010769 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLV---PNLLATG 423 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~---~~~l~t~ 423 (502)
.......+.++.+.+ . .+++++.++.+++|+++... ...... ..+...+.++++.+.. +..++++
T Consensus 166 ~~~~~~~~~~~~~~~--~-~~~~~~~~~~i~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (368)
T 3mmy_A 166 VLQLPERCYCADVIY--P-MAVVATAERGLIVYQLENQP--------SEFRRIESPLKHQHRCVAIFKDKQNKPTGFALG 234 (368)
T ss_dssp EEECSSCEEEEEEET--T-EEEEEEGGGCEEEEECSSSC--------EEEEECCCSCSSCEEEEEEEECTTSCEEEEEEE
T ss_pred EEecCCCceEEEecC--C-eeEEEeCCCcEEEEEecccc--------chhhhccccccCCCceEEEcccCCCCCCeEEEe
Confidence 444556777777775 3 78888999999999998752 222222 2234455666665543 1339999
Q ss_pred eCCCcEEEEECCCCCe-eEEEEecCCCC------------CEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010769 424 STDKMVKLWDLSNNQP-SCIASRNPKAG------------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~-~~~~~~~~~~~------------~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
+.||.|++|++..... ..+..+..|.. .|++++|+|++++ |++|+.||.|++||+.+++++.....
T Consensus 235 ~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-l~s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 235 SIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGT-LATVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp ETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCC-EEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCE-EEEEccCCeEEEEECCCCcEEEEecC
Confidence 9999999999998743 23445555554 7999999999995 89999999999999999988776554
Q ss_pred C
Q 010769 491 K 491 (502)
Q Consensus 491 ~ 491 (502)
+
T Consensus 314 ~ 314 (368)
T 3mmy_A 314 L 314 (368)
T ss_dssp C
T ss_pred C
Confidence 3
No 115
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9e-30 Score=273.00 Aligned_cols=257 Identities=16% Similarity=0.226 Sum_probs=198.9
Q ss_pred CCCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCC--CCEEE
Q 010769 136 DEDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREK--GNFMA 213 (502)
Q Consensus 136 ~~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~--~~~la 213 (502)
..|...|.+++|+|++++|++|+.++ .+.||.+..........+..| .....|+.| +++ +++|+
T Consensus 6 ~gH~~~V~~l~~s~dg~~latg~~dg---~I~vwd~~~~~~~~~~~l~~h----~~~V~~l~~-------s~~~~~~~l~ 71 (753)
T 3jro_A 6 NAHNELIHDAVLDYYGKRLATCSSDK---TIKIFEVEGETHKLIDTLTGH----EGPVWRVDW-------AHPKFGTILA 71 (753)
T ss_dssp --CCCCEEEECCCSSSCCEEEEETTT---EEEEEEEETTEEEEEEEECCC----SSCEEEEEE-------CCTTSCSEEE
T ss_pred ccCcceeEEEEECCCCCeEEEEECCC---cEEEEecCCCCCccceeccCC----cCceEEEEe-------cCCCCCCEEE
Confidence 45889999999999999999999887 677777763322100111112 233467877 555 99999
Q ss_pred EecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC-CcEEEEEecCCcEE
Q 010769 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF-RNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~-~~~l~sgs~Dg~v~ 292 (502)
+|+.||.|++|++.... ......+.+|...|++++|+|+. +.+|++|+.||+|+
T Consensus 72 s~s~Dg~I~vwd~~~~~-------------------------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~ 126 (753)
T 3jro_A 72 SCSYDGKVLIWKEENGR-------------------------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVS 126 (753)
T ss_dssp EEETTSCEEEEEEETTE-------------------------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEE
T ss_pred EEeCCCeEEEEECCCCc-------------------------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEE
Confidence 99999999999986421 11233445799999999999983 45999999999999
Q ss_pred EEECCCCe--eeEEeccCCCCeEEEEEcCC------------CCcEEEEEECCCcEEEEeCCCCCCc----cceEeecCC
Q 010769 293 IWDVAAGK--CNLTLEHHTDKVQAVAWNHH------------SPQILLSGSFDRSVVMKDARISTHS----GFKWAVAAD 354 (502)
Q Consensus 293 vwd~~~~~--~~~~~~~h~~~v~~l~~~~~------------~~~~l~s~~~dg~i~vwd~~~~~~~----~~~~~~~~~ 354 (502)
+||+.++. ....+.+|...|.+++|+|. ++.+|++|+.||.|++||+++.... .....|...
T Consensus 127 vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 127 VVEFKENGTTSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp EEECCSSSCCCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred EEEeecCCCcceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCc
Confidence 99998873 44566789999999999995 2389999999999999999887532 223357889
Q ss_pred eEEEEeCCCC--CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 355 VESLAWDPHA--EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 355 v~~v~~~p~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
|.+++|+|++ +.++++++.||.|++||+++..... .........|...|++++|+|++ .+|++|+.||.|++|
T Consensus 207 V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~----~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vw 281 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPW----KKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLW 281 (753)
T ss_dssp EEEEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCC----BCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECC
T ss_pred EEEEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcc----eeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEE
Confidence 9999999984 4589999999999999999863211 12333445688999999999998 899999999999999
Q ss_pred ECCC
Q 010769 433 DLSN 436 (502)
Q Consensus 433 d~~~ 436 (502)
++..
T Consensus 282 d~~~ 285 (753)
T 3jro_A 282 KENL 285 (753)
T ss_dssp BCCS
T ss_pred ecCC
Confidence 9974
No 116
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=1.5e-27 Score=228.42 Aligned_cols=252 Identities=21% Similarity=0.365 Sum_probs=203.1
Q ss_pred ceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE
Q 010769 194 LCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA 273 (502)
Q Consensus 194 ~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~ 273 (502)
.|++| |+++ +||+|. |++|+|||+.+++.+. ...+.+|...|++++
T Consensus 29 ~~l~W-------S~~~-~lAvg~-D~tV~iWd~~tg~~~~-------------------------~~~~~~~~~~V~~v~ 74 (318)
T 4ggc_A 29 NLVDW-------SSGN-VLAVAL-DNSVYLWSASSGDILQ-------------------------LLQMEQPGEYISSVA 74 (318)
T ss_dssp BCEEE-------CTTS-EEEEEE-TTEEEEEETTTCCEEE-------------------------EEECCSTTCCEEEEE
T ss_pred eEEEE-------CCCC-EEEEEe-CCEEEEEECCCCCEEE-------------------------EEEecCCCCeEEEEE
Confidence 46778 6654 788775 8999999998654322 123457889999999
Q ss_pred ecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc-cceEeec
Q 010769 274 WNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS-GFKWAVA 352 (502)
Q Consensus 274 ~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~~~ 352 (502)
|+|+ +++|++|+.||+|++|++.+++++..+.+|...+.++.+.+ .++++++.++.+++|+....... .....|.
T Consensus 75 ~~~~-~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (318)
T 4ggc_A 75 WIKE-GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEHHVATLSGHS 150 (318)
T ss_dssp ECTT-SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSCEEEEEECCS
T ss_pred ECCC-CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCceeEEEEcCcc
Confidence 9999 56999999999999999999999999999999998877764 68999999999999999876543 3345678
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEE--EEeCCCcEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA--TGSTDKMVK 430 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~--t~s~dg~i~ 430 (502)
..+.++.|++.+. ++++++.||.|++||++++... .........|.+.|.+++++|.++.+++ +++.+++|+
T Consensus 151 ~~~~~~~~~~~~~-~l~s~~~d~~i~iwd~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~ 224 (318)
T 4ggc_A 151 QEVCGLRWAPDGR-HLASGGNDNLVNVWPSAPGEGG-----WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIR 224 (318)
T ss_dssp SCEEEEEECTTSS-EEEEEETTSCEEEEESSCBTTB-----SCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEE
T ss_pred CceEEEEEcCCCC-EEEEEecCcceeEEECCCCccc-----ccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEE
Confidence 8999999999875 8999999999999999876321 2345667788899999999998766654 566789999
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEE-eCCCcEEEEECCCCccccccccCC
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG-GSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg-~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+|+....... ....+...+..+.|+|++.++++++ +.|+.|+|||+.+++++..+.+|.
T Consensus 225 lwd~~~~~~~---~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~ 284 (318)
T 4ggc_A 225 IWNVCSGACL---SAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 284 (318)
T ss_dssp EEETTTCCEE---EEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred EEeccccccc---ccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCC
Confidence 9999988732 2234557799999999998755443 378999999999999988776654
No 117
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.8e-29 Score=268.93 Aligned_cols=238 Identities=16% Similarity=0.189 Sum_probs=192.7
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
.+.|++| +|++++||+|+.||.|+||+...... . ....|...|.+
T Consensus 19 ~V~~laf-------spdg~~lAsgs~Dg~I~lw~~~~~~~---------------------------~-~~~~~~~~V~~ 63 (902)
T 2oaj_A 19 KPIAAAF-------DFTQNLLAIATVTGEVHIYGQQQVEV---------------------------V-IKLEDRSAIKE 63 (902)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTSEEEEECSTTCEE---------------------------E-EECSSCCCEEE
T ss_pred CcEEEEE-------CCCCCEEEEEeCCCEEEEEeCCCcEE---------------------------E-EEcCCCCCEEE
Confidence 3468877 79999999999999999999764211 1 11247889999
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc------
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS------ 345 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~------ 345 (502)
|+|+| +. +|++++.|++|+|||+.+++++..+. |...|++++|+|++ .+|++|+.||.|++||+++....
T Consensus 64 l~fsp-g~-~L~S~s~D~~v~lWd~~~~~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~ 139 (902)
T 2oaj_A 64 MRFVK-GI-YLVVINAKDTVYVLSLYSQKVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDN 139 (902)
T ss_dssp EEEET-TT-EEEEEETTCEEEEEETTTCSEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECC
T ss_pred EEEcC-CC-EEEEEECcCeEEEEECCCCcEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceecc
Confidence 99999 45 99999999999999999999998886 67899999999999 89999999999999999876642
Q ss_pred -----cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC-----------------
Q 010769 346 -----GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH----------------- 403 (502)
Q Consensus 346 -----~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h----------------- 403 (502)
.....|.+.|.+++|+|++...+++|+.+|.| +||+++. .++..+..|
T Consensus 140 ~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~ 209 (902)
T 2oaj_A 140 LQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN---------EIKQSFIYELPPFAPGGDFSEKTNEK 209 (902)
T ss_dssp HHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTT---------EEEEEECCCBCTTCCCSTTCCCTTSC
T ss_pred ccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC---------ceEEEEecccCCcCCCcccccccccc
Confidence 11234678899999999766689999999999 9999986 455555544
Q ss_pred -CCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec----------------CCCCCEEEEEEc----CCCC
Q 010769 404 -DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN----------------PKAGAVFSVAFS----EDSP 462 (502)
Q Consensus 404 -~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~----------------~~~~~v~~~~~s----pd~~ 462 (502)
...|++++|+|++ .+|++|+.||+|++||++++++.....+. .|..+|++++|+ |++.
T Consensus 210 h~~~V~~v~fspdg-~~lasgs~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~ 288 (902)
T 2oaj_A 210 RTPKVIQSLYHPNS-LHIITIHEDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT 288 (902)
T ss_dssp BCCCEEEEEECTTS-SEEEEEETTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE
T ss_pred cCCCeEEEEEcCCC-CEEEEEECCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC
Confidence 5789999999998 99999999999999999998754332221 134579999995 5554
Q ss_pred cEEEEEeCC-----CcEEEEEC
Q 010769 463 FVLAIGGSK-----GKLEIWDT 479 (502)
Q Consensus 463 ~llasg~~d-----g~i~vwd~ 479 (502)
.+|++|+.+ ..+++|++
T Consensus 289 ~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 289 SLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp EEEEEEECSTTSSCCCEEEEEE
T ss_pred EEEEeCCCCCCCCCceEEEEec
Confidence 578888776 37899985
No 118
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=6.1e-28 Score=241.96 Aligned_cols=283 Identities=8% Similarity=0.038 Sum_probs=210.6
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeee-e--c-cccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVH-H--H-IIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~-~--~-~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..+.+++|+|++.++++++.++ .+.+| +.... .+... . . ......+.++.| ++++++++++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~---~i~~~--d~~~g---~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~~~s~ 187 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDE---GMDVL--DINSG---QTVRLSPPEKYKKKLGFVETISI-------PEHNELWVSQ 187 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSS---SEEEE--ETTTC---CEEEECCCHHHHTTCCEEEEEEE-------GGGTEEEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCC---eEEEE--ECCCC---eEeeecCcccccccCCceeEEEE-------cCCCEEEEEE
Confidence 4567999999666666665554 34444 44433 21110 0 0 001122355666 6789999999
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+.++.|++||+..... ...+..|...+.+++|+|++..++++++.++.|++||
T Consensus 188 ~~d~~v~~~d~~~~~~---------------------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 188 MQANAVHVFDLKTLAY---------------------------KATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp GGGTEEEEEETTTCCE---------------------------EEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCceE---------------------------EEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 9999999999975322 1223368889999999999665556777899999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEE--------CCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCE
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS--------FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHS 367 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~--------~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~ 367 (502)
+.+++.+..+..+ ..+.+++|+|++ .+|++++ .||.|++||+++++... ...+...+.+++|+|++..+
T Consensus 241 ~~~~~~~~~~~~~-~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 241 RKTKLEIRKTDKI-GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKLID-TIGPPGNKRHIVSGNTENKI 317 (433)
T ss_dssp TTTTEEEEECCCC-SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEEEE-EEEEEECEEEEEECSSTTEE
T ss_pred CCCCcEEEEecCC-CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcEEe-eccCCCCcceEEECCCCCEE
Confidence 9999998888754 569999999999 6777777 58899999999876544 44566789999999998767
Q ss_pred EEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC---------------CCcEEEE
Q 010769 368 FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST---------------DKMVKLW 432 (502)
Q Consensus 368 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~---------------dg~i~vw 432 (502)
+++++.++.|++||+.+. ..+..+. +...+.+++|+|++ .+|++++. ||.|++|
T Consensus 318 ~~~~~~~~~v~v~d~~~~---------~~~~~~~-~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~ 386 (433)
T 3bws_A 318 YVSDMCCSKIEVYDLKEK---------KVQKSIP-VFDKPNTIALSPDG-KYLYVSCRGPNHPTEGYLKKGLVLGKVYVI 386 (433)
T ss_dssp EEEETTTTEEEEEETTTT---------EEEEEEE-CSSSEEEEEECTTS-SEEEEEECCCCCTTTCTTSCCSSCCEEEEE
T ss_pred EEEecCCCEEEEEECCCC---------cEEEEec-CCCCCCeEEEcCCC-CEEEEEecCCCccccccccccccceEEEEE
Confidence 788899999999999875 4555554 77889999999998 77777665 5799999
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
|+.+++. +..+.. ...+.+++|+|++++++++++.++.|++|++..
T Consensus 387 d~~~~~~--~~~~~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 387 DTTTDTV--KEFWEA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp ETTTTEE--EEEEEC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred ECCCCcE--EEEecC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 9998874 333433 457999999999996444444599999999863
No 119
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.96 E-value=1.2e-27 Score=239.95 Aligned_cols=301 Identities=11% Similarity=0.072 Sum_probs=223.0
Q ss_pred cccccccc---ccCCCceEEEEEecCCc-----------ceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCC
Q 010769 139 SEDLEDMT---INPNDAVIVCARNEDDV-----------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLK 204 (502)
Q Consensus 139 ~~~v~~~~---~~p~~~~l~~~~~~~~~-----------~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~ 204 (502)
...+..++ |+|+++.+++++..... ..+.||.++.... .+........+..+.++.|
T Consensus 60 ~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~~~~~~~~~~~~~~~~------ 130 (433)
T 3bws_A 60 NIALVEMAIPVYKDEKEIELKLSSPGFQNSSYRIRKPEELNEKLIALDKEGI---THRFISRFKTGFQPKSVRF------ 130 (433)
T ss_dssp TEEEEEEEEECCCTTCCEEEEEECTTBCCEEEEESSGGGGTTCEEECCBTTC---SEEEEEEEECSSCBCCCEE------
T ss_pred CCccEEEEEeeccCCCcEEEEEEccccCcceeeecccCCCceEEEEECCCCC---cceEEEEEcCCCCceEEEE------
Confidence 34567777 88888877766543321 1126676665433 3333333334455567776
Q ss_pred CCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 205 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 205 ~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|++.++++++.++.|++||+.++..... .....+.+|...|.+++|+++ +.++++
T Consensus 131 -s~~~~~~~~~~~~~~i~~~d~~~g~~~~~----------------------~~~~~~~~~~~~v~~~~~~~~-~~~~~s 186 (433)
T 3bws_A 131 -IDNTRLAIPLLEDEGMDVLDINSGQTVRL----------------------SPPEKYKKKLGFVETISIPEH-NELWVS 186 (433)
T ss_dssp -SSSSEEEEEBTTSSSEEEEETTTCCEEEE----------------------CCCHHHHTTCCEEEEEEEGGG-TEEEEE
T ss_pred -eCCCeEEEEeCCCCeEEEEECCCCeEeee----------------------cCcccccccCCceeEEEEcCC-CEEEEE
Confidence 67888899999999999999976432210 011123478899999999998 679999
Q ss_pred EecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 364 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~ 364 (502)
++.|+.|++||+.+++.+..+..|...+.+++|+|++..++++++.++.|++||+++++... .......+.+++|+|++
T Consensus 187 ~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~-~~~~~~~~~~~~~~~~g 265 (433)
T 3bws_A 187 QMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR-KTDKIGLPRGLLLSKDG 265 (433)
T ss_dssp EGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-ECCCCSEEEEEEECTTS
T ss_pred ECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-EecCCCCceEEEEcCCC
Confidence 99999999999999999999988999999999999994444666689999999998776543 33345568999999987
Q ss_pred CCEEEEEe--------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010769 365 EHSFVVSL--------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 365 ~~~l~~~~--------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
. .+++++ .+|.|++||++++ ..+.. ..|...+.+++|+|++..++++++.++.|++||+.+
T Consensus 266 ~-~l~~~~~~~~~~~~~dg~i~~~d~~~~---------~~~~~-~~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~ 334 (433)
T 3bws_A 266 K-ELYIAQFSASNQESGGGRLGIYSMDKE---------KLIDT-IGPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE 334 (433)
T ss_dssp S-EEEEEEEESCTTCSCCEEEEEEETTTT---------EEEEE-EEEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT
T ss_pred C-EEEEEECCCCccccCCCeEEEEECCCC---------cEEee-ccCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC
Confidence 6 566655 5889999999875 33333 346668999999999856778889999999999998
Q ss_pred CCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeC---------------CCcEEEEECCCCcccccc
Q 010769 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS---------------KGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~---------------dg~i~vwd~~~~~~~~~~ 488 (502)
++. +..+. +...+.+++|+|++++ |++++. ||.|++||+.+++.+...
T Consensus 335 ~~~--~~~~~-~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 335 KKV--QKSIP-VFDKPNTIALSPDGKY-LYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp TEE--EEEEE-CSSSEEEEEECTTSSE-EEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred CcE--EEEec-CCCCCCeEEEcCCCCE-EEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 763 33333 5577999999999996 555554 579999999998876554
No 120
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=6.6e-29 Score=246.00 Aligned_cols=297 Identities=12% Similarity=0.079 Sum_probs=184.6
Q ss_pred eeccccCCCcceeeeecCCCCCCCC-CCEEEEecCCCcEEEeeCCCCCCCCc----eeeeCCcchhhhhhccccCCcccc
Q 010769 184 HHHIIIPAFPLCMAWLDCPLKDREK-GNFMAVGSMEPAIEIWDLDVIDEVQP----HVILGGIDEEKKKKKSKKGKKSSI 258 (502)
Q Consensus 184 ~~~~~~~~~~~~~~w~~~~~~~s~~-~~~la~g~~dg~I~iwdl~~~~~~~~----~~~l~~~~~~~~~~~~~~~~~~~~ 258 (502)
-|..+++.+|+++.|... +++ ++++++| .++.|++|+......... ...+......... .........
T Consensus 9 ~~~lpl~~~p~~~~w~~~----~~~~~~l~a~g-~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 81 (393)
T 4gq1_A 9 QYQLPLNVRPYTTTWCSQ----SPSCSNLLAIG-HDTGITIYCASEEQTPGSTGLTLQELFTIQTGLPT--LHLSFSSSC 81 (393)
T ss_dssp EEECCTTCCEEEEEECTT----SGGGTTEEEEE-ESSEEEEEEEEECCSSSCCSEEEEEEEEEECSSCE--EEEEECTTC
T ss_pred ceEecCCCCCeEEEEeCC----CCCCCCEEEEE-CCCCEEEEECCCCCcccccccceeeeEEEecCCCe--eeEeecCCc
Confidence 356778899999999643 444 4555555 578899998643211110 0000000000000 000000011
Q ss_pred ccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeee-----EEeccCCCCeEEEEEcC--------CCCcEE
Q 010769 259 KYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-----LTLEHHTDKVQAVAWNH--------HSPQIL 325 (502)
Q Consensus 259 ~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~-----~~~~~h~~~v~~l~~~~--------~~~~~l 325 (502)
......|...+....+.++ ..+|++|+.|++|+|||+.++.+. ..+.+|.+.|++++|+| ++ ++|
T Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~-~~l 159 (393)
T 4gq1_A 82 SYSENLHDGDGNVNSSPVY-SLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAE-QVI 159 (393)
T ss_dssp EEECC----------CCEE-EEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEE-EEE
T ss_pred cccccccCCCcceeecCCC-CCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCC-CEE
Confidence 1122234333444444444 678999999999999999988643 34689999999999997 55 899
Q ss_pred EEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCC------------
Q 010769 326 LSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTS------------ 393 (502)
Q Consensus 326 ~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~------------ 393 (502)
++|+.|++|+|||+++.........+...+.+++|+|++..+|++++.||.|++||+++.........
T Consensus 160 as~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 160 ASVGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EEEETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EEEECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 99999999999999988777777889999999999998877899999999999999988643211000
Q ss_pred ----CCccEEEecCCCCeeEEEEc-CCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEE-------------
Q 010769 394 ----QQSSFTLHAHDKAVCTISYN-PLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV------------- 455 (502)
Q Consensus 394 ----~~~~~~~~~h~~~v~~l~~s-p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~------------- 455 (502)
........+|...+.++.|+ |++ ..|++++.|+++++||+..++. ...+..|...+..+
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg-~~l~s~s~d~~i~vwd~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~ 316 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDG-SGILAMCKSGAWLRWNLFANND--YNEISDSTMKLGPKNLLPNVQGISLFP 316 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTT-CEEEEECTTSEEEEEEC---------------------CCSCSEEEECSSC
T ss_pred ccccceeeeecccccccceeeeeecCCC-CEEEEEeCCCCEEEEECccCCC--CceEeeecCccccEEEccccccccccC
Confidence 00112234688899999997 566 8999999999999999987652 22222333323222
Q ss_pred -----EEc-CCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 456 -----AFS-EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 456 -----~~s-pd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
.|+ +.+..++++|+.||.|+|||+.++..+.....+.
T Consensus 317 ~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~ 359 (393)
T 4gq1_A 317 SLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLG 359 (393)
T ss_dssp CSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECS
T ss_pred cceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCC
Confidence 233 3344457788889999999999998877665543
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.6e-27 Score=232.70 Aligned_cols=239 Identities=11% Similarity=0.170 Sum_probs=179.8
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|++| +|+|++||+|+.++ ++||++....... . .+...+..+
T Consensus 22 V~~v~f-------s~dg~~la~g~~~~-~~iw~~~~~~~~~---------------------------~--~~~~~~~~~ 64 (355)
T 3vu4_A 22 VTDYEF-------NQDQSCLILSTLKS-FEIYNVHPVAHIM---------------------------S--QEMRHLSKV 64 (355)
T ss_dssp CCEEEE-------CTTSSEEEEECSSE-EEEEEETTEEEEE---------------------------E--EECSCCCEE
T ss_pred eEEEEE-------CCCCCEEEEEcCCE-EEEEecCCcceee---------------------------e--eecCCeEEE
Confidence 368777 89999999998775 7899986422110 0 112247778
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC-CCccceEee
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS-THSGFKWAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~-~~~~~~~~~ 351 (502)
++.+....++++|+.|++|+|||+.+++++..+. |...|.++.|+++. ++++ .++.|++||+.+. +.......
T Consensus 65 ~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~~---~~~~-~~~~i~i~d~~~~~~~~~~~~~- 138 (355)
T 3vu4_A 65 RMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSREF---IVVS-YGDVISVFKFGNPWKRITDDIR- 138 (355)
T ss_dssp EECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSSE---EEEE-ETTEEEEEESSTTCCBSSCCEE-
T ss_pred EEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCCE---EEEE-EcCEEEEEECCCCceeeEEecc-
Confidence 8888754445678889999999999999999887 66799999999864 4443 4789999999987 44433322
Q ss_pred cCCeEEEEeCCCCCCEEEE--EeCCCeEEEEECCCCCCCCCC------CCCCc-cEEEecCCCCeeEEEEcCCCCCEEEE
Q 010769 352 AADVESLAWDPHAEHSFVV--SLEDGTIKGFDIRTAKSDPDS------TSQQS-SFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~--~~~dg~i~i~d~~~~~~~~~~------~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
....+++++ . ++++ |+.+|.|++||+++....... ....+ +..+.+|...|++++|+|++ .+|++
T Consensus 139 --~~~~~~~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g-~~l~s 212 (355)
T 3vu4_A 139 --FGGVCEFSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKS-DMVAT 212 (355)
T ss_dssp --EEEEEEEET--T-EEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTS-SEEEE
T ss_pred --CCceEEEEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCC-CEEEE
Confidence 444556666 3 4554 689999999999975210000 00023 78889999999999999998 99999
Q ss_pred EeCCCc-EEEEECCCCCeeEEEEec-C-CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 423 GSTDKM-VKLWDLSNNQPSCIASRN-P-KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 423 ~s~dg~-i~vwd~~~~~~~~~~~~~-~-~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
|+.|++ |++||+++++ ++..+. + |.+.|++++|+|++. +|++++.|++|+|||+..+.
T Consensus 213 ~s~d~~~v~iwd~~~~~--~~~~~~~g~h~~~v~~~~~s~~~~-~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 213 CSQDGTIIRVFKTEDGV--LVREFRRGLDRADVVDMKWSTDGS-KLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp EETTCSEEEEEETTTCC--EEEEEECTTCCSCEEEEEECTTSC-EEEEEETTCEEEEEESSCCS
T ss_pred EeCCCCEEEEEECCCCc--EEEEEEcCCCCCcEEEEEECCCCC-EEEEEECCCEEEEEEccCCC
Confidence 999998 9999999988 455555 4 889999999999999 59999999999999998764
No 122
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=1.1e-27 Score=234.77 Aligned_cols=260 Identities=8% Similarity=0.054 Sum_probs=189.9
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecCCC-------cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccC
Q 010769 191 AFPLCMAWLDCPLKDREKGNFMAVGSMEP-------AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG 263 (502)
Q Consensus 191 ~~~~~~~w~~~~~~~s~~~~~la~g~~dg-------~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (502)
.+.+|++| +|++++||+|+.+. .|+||+++......... ........+.
T Consensus 15 ~PV~sv~f-------s~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~-----------------~~~~~~~~l~ 70 (365)
T 4h5i_A 15 YPAYGAKF-------LNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQ-----------------FHILSEFALE 70 (365)
T ss_dssp SCEEEEEE-------EETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHH-----------------EEEEEEEECC
T ss_pred CCEEEEEE-------eCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeee-----------------eeeeeEEEcc
Confidence 33478877 68999999997543 59999987533211100 0011223466
Q ss_pred CcccceeeEEecCCCCcEEEEE-----------ecCCcEEEEECCCCee----eEEe-----ccCCCCeEEEEEcCCCCc
Q 010769 264 SHTDSVLGLAWNKEFRNILASA-----------SADKQVKIWDVAAGKC----NLTL-----EHHTDKVQAVAWNHHSPQ 323 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sg-----------s~Dg~v~vwd~~~~~~----~~~~-----~~h~~~v~~l~~~~~~~~ 323 (502)
+|...|++++++++ .+++| +.|+++++|++..... +... ..+...+.+++|+|+| +
T Consensus 71 ~~~~~v~s~~~~~~---~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg-~ 146 (365)
T 4h5i_A 71 DNDDSPTAIDASKG---IILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREG-T 146 (365)
T ss_dssp TTSCCCCEEEEETT---EEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTS-S
T ss_pred CCCCceEEEEeCCC---EEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCC-C
Confidence 88999999988754 56655 4578899999865432 1111 2244568999999999 6
Q ss_pred EEEE--EECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe
Q 010769 324 ILLS--GSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH 401 (502)
Q Consensus 324 ~l~s--~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~ 401 (502)
++++ ++.|++|++||+++..... ...+...|.+++|+|++. ++++++ ++.+.+|+..++. ........
T Consensus 147 ~la~as~~~d~~i~iwd~~~~~~~~-~~~~~~~V~~v~fspdg~-~l~s~s-~~~~~~~~~~~~~-------~~~~~~~~ 216 (365)
T 4h5i_A 147 VAAIASSKVPAIMRIIDPSDLTEKF-EIETRGEVKDLHFSTDGK-VVAYIT-GSSLEVISTVTGS-------CIARKTDF 216 (365)
T ss_dssp CEEEEESCSSCEEEEEETTTTEEEE-EEECSSCCCEEEECTTSS-EEEEEC-SSCEEEEETTTCC-------EEEEECCC
T ss_pred EEEEEECCCCCEEEEeECCCCcEEE-EeCCCCceEEEEEccCCc-eEEecc-ceeEEEEEeccCc-------ceeeeecC
Confidence 6654 4478999999999877655 456788899999999876 677776 4556677766651 11223345
Q ss_pred cCCCCeeEEEEcCCCCCEEEEEeCCC----cEEEEECCCCCee--EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEE
Q 010769 402 AHDKAVCTISYNPLVPNLLATGSTDK----MVKLWDLSNNQPS--CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLE 475 (502)
Q Consensus 402 ~h~~~v~~l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~--~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~ 475 (502)
.|...|.+++|+|++ .++++++.++ .+++|++...... ....+..|...|++++|+|+|+ +||+|+.|++|+
T Consensus 217 ~~~~~v~~v~fspdg-~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~-~lasgs~D~~V~ 294 (365)
T 4h5i_A 217 DKNWSLSKINFIADD-TVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGE-LAVLASNDNSIA 294 (365)
T ss_dssp CTTEEEEEEEEEETT-EEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSC-EEEEEETTSCEE
T ss_pred CCCCCEEEEEEcCCC-CEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCC-ceEEEcCCCEEE
Confidence 688899999999998 8899988887 5888998776532 3455678889999999999999 599999999999
Q ss_pred EEECCCCcccccccc
Q 010769 476 IWDTLSDAGISNRFS 490 (502)
Q Consensus 476 vwd~~~~~~~~~~~~ 490 (502)
|||+.+++++.....
T Consensus 295 iwd~~~~~~~~~~~~ 309 (365)
T 4h5i_A 295 LVKLKDLSMSKIFKQ 309 (365)
T ss_dssp EEETTTTEEEEEETT
T ss_pred EEECCCCcEEEEecC
Confidence 999999998887653
No 123
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.5e-27 Score=236.62 Aligned_cols=237 Identities=11% Similarity=0.054 Sum_probs=176.8
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..+++| +|||+++|+++.|++|+ +..... .+.+|...|.++
T Consensus 18 v~sv~~-------SpDG~~iASas~D~TV~--d~~~~~------------------------------~l~gh~~~v~~V 58 (588)
T 2j04_A 18 KNNLTW-------ARDGTLYLTTFPDISIG--QPKYAK------------------------------DINCNSKNLFHV 58 (588)
T ss_dssp SCCEEE-------CTTSCEEEECSSSEEEE--EECCCS------------------------------CCSSBGGGTEEE
T ss_pred EEEEEE-------CCCCCEEEEEcCCceee--cccccc------------------------------eecCCCccEEEE
Confidence 356666 89999999999999999 643211 124799999999
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~ 352 (502)
+|+|++ .++++.+|+.... .+..+ .|...|.+++|+|+| .+|++++.||.|++|+... ..... .+.
T Consensus 59 ~FsPdg--------~~~~~~~~~~~~~-~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~--~l~~l-~~~ 124 (588)
T 2j04_A 59 KEFPLE--------FENKLDFELAQQN-GLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK--MLTNL-DSK 124 (588)
T ss_dssp EEECCC--------CCCTTTTSCCCSS-CSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE--EEEEC-CCS
T ss_pred EECCCC--------CcceEEEEeCCCc-eEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc--eeeec-cCC
Confidence 999995 4566666654322 22233 458899999999999 8999999999999999644 22211 233
Q ss_pred C-----CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE----ecCCCCeeEEEEcCCCCCEEEEE
Q 010769 353 A-----DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL----HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 353 ~-----~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
. .+.+++|+|+|. ++++|+.||+|++||+..+..... ....+.++ .+|...|.+++|+|+| ++++
T Consensus 125 ~~~~~~sv~svafSPDG~-~LAsgs~DGtVkIWd~~~~~l~~~--~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laas 198 (588)
T 2j04_A 125 GNLSSRTYHCFEWNPIES-SIVVGNEDGELQFFSIRKNSENTP--EFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAA 198 (588)
T ss_dssp SCSTTTCEEEEEECSSSS-CEEEEETTSEEEEEECCCCTTTCC--CCEEEEEEECSCTTCCCCEEEEEEETTE---EEEE
T ss_pred CccccccEEEEEEcCCCC-EEEEEcCCCEEEEEECCCCccccc--cceeeeeeecccccccccEEEEEEcCCc---EEEE
Confidence 3 499999999876 899999999999999987621000 00024565 5677899999999976 8889
Q ss_pred eCCCcEEEEECCCCCee-EEEEe-cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccccCC
Q 010769 424 STDKMVKLWDLSNNQPS-CIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRFSKY 492 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~-~~~~~-~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~~~~ 492 (502)
+.|++|++|++..+... ....+ .+|...|.+++|+ +. .||+++ +++|++||+.++......++|.
T Consensus 199 s~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g~-~LASa~-~~tIkLWd~~~~~~~~~~~gh~ 265 (588)
T 2j04_A 199 LSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--DY-KVVLTC-PGYVHKIDLKNYSISSLKTGSL 265 (588)
T ss_dssp ETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--TT-EEEEEC-SSEEEEEETTTTEEEEEECSCC
T ss_pred eCCCeEEEEECCCCccccceeeecccccCcEEEEEEE--CC-EEEEEe-CCeEEEEECCCCeEEEEEcCCC
Confidence 99999999999887632 22344 4788899999999 55 578776 6999999999887744444543
No 124
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.9e-26 Score=215.42 Aligned_cols=196 Identities=16% Similarity=0.158 Sum_probs=148.5
Q ss_pred CcccceeeEEecCCCCcEEEEEe--cCCcEEEEEC-CCCeeeEEeccCCCCeEEEEEcC---CCCcEEEEEECCCcEEEE
Q 010769 264 SHTDSVLGLAWNKEFRNILASAS--ADKQVKIWDV-AAGKCNLTLEHHTDKVQAVAWNH---HSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs--~Dg~v~vwd~-~~~~~~~~~~~h~~~v~~l~~~~---~~~~~l~s~~~dg~i~vw 337 (502)
+|...|+++ ++ ++++.+++ .|++|++|++ ..++.+..+.+|...+..++|++ ++ .+|++|+.|++|+||
T Consensus 134 g~~~~v~~l---~~-g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIW 208 (356)
T 2w18_A 134 GNIKAVLGL---TK-RRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIW 208 (356)
T ss_dssp EEEEEEEEE---TT-TEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEE
T ss_pred CCeEEEEec---CC-CcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEE
Confidence 455555554 34 54555543 5999999999 45888888889999999999998 55 899999999999999
Q ss_pred eCCCCCCccceEee---cCCeEEEEeCCCCCCE-----------EEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE---
Q 010769 338 DARISTHSGFKWAV---AADVESLAWDPHAEHS-----------FVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL--- 400 (502)
Q Consensus 338 d~~~~~~~~~~~~~---~~~v~~v~~~p~~~~~-----------l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~--- 400 (502)
|+++++....+..+ ...+.+++|+|++..+ +++|+.|++|++||..++ +.+..+
T Consensus 209 Dl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---------k~l~v~~~~ 279 (356)
T 2w18_A 209 NLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT---------LSVGVMLYC 279 (356)
T ss_dssp ETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTT---------EEEEEEEEC
T ss_pred ECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC---------EEEEEEEee
Confidence 99999876655433 2357788999987532 256788999999999876 443333
Q ss_pred --ecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEE-EEEEcCCCCcEEEEEeCCCcEEEE
Q 010769 401 --HAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVF-SVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 401 --~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~-~~~~spd~~~llasg~~dg~i~vw 477 (502)
.+|...+.+..++ + .++++++.|++|+|||+.+++ ++.++.+|...+. +++|+|+|+ +|++|+.|++|+||
T Consensus 280 ~p~Gh~~~~lsg~~s--g-~~lASgS~DgTIkIWDl~tGk--~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklW 353 (356)
T 2w18_A 280 LPPGQAGRFLEGDVK--D-HCAAAILTSGTIAIWDLLLGQ--CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVY 353 (356)
T ss_dssp CCTTCCCCEEEEEEE--T-TEEEEEETTSCEEEEETTTCS--EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEE
T ss_pred ccCCCcceeEccccC--C-CEEEEEcCCCcEEEEECCCCc--EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEe
Confidence 3566655555555 4 789999999999999999998 6777888876655 689999999 59999999999999
Q ss_pred EC
Q 010769 478 DT 479 (502)
Q Consensus 478 d~ 479 (502)
|+
T Consensus 354 d~ 355 (356)
T 2w18_A 354 HY 355 (356)
T ss_dssp EE
T ss_pred cC
Confidence 96
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=1.2e-25 Score=222.12 Aligned_cols=238 Identities=14% Similarity=0.097 Sum_probs=186.1
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+.++++++.++.|++||+..+... ..+..| ..+.+++|+|++..++++++.|
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~~~---------------------------~~~~~~-~~~~~~~~s~dg~~l~~~~~~d 53 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNKVT---------------------------ATIPVG-SNPMGAVISPDGTKVYVANAHS 53 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEE---------------------------EEEECS-SSEEEEEECTTSSEEEEEEGGG
T ss_pred CEEEEEcCCCCEEEEEECCCCeEE---------------------------EEeecC-CCcceEEECCCCCEEEEECCCC
Confidence 357889999999999999753221 122234 4589999999966556888899
Q ss_pred CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEE
Q 010769 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 368 (502)
++|++||+.+++.+..+..+. .+.+++|+|++..++++++.++.|++||+.+++... ...+...+.+++|+|++..++
T Consensus 54 ~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~-~~~~~~~~~~~~~s~dg~~l~ 131 (391)
T 1l0q_A 54 NDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG-TVKTGKSPLGLALSPDGKKLY 131 (391)
T ss_dssp TEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-EEECSSSEEEEEECTTSSEEE
T ss_pred CeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-EEeCCCCcceEEECCCCCEEE
Confidence 999999999999998887655 899999999994445666678999999999876654 445567789999999987666
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC
Q 010769 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK 448 (502)
Q Consensus 369 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~ 448 (502)
++++.++.|++||++++ +.+..+..| ..+.+++|+|++..++++++.++.|++||+++++. +.... +
T Consensus 132 ~~~~~~~~v~~~d~~~~---------~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~--~~~~~-~ 198 (391)
T 1l0q_A 132 VTNNGDKTVSVINTVTK---------AVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV--IDTVK-V 198 (391)
T ss_dssp EEETTTTEEEEEETTTT---------EEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE--EEEEE-C
T ss_pred EEeCCCCEEEEEECCCC---------cEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE--EEEEe-c
Confidence 78888999999999876 556666554 45799999999844457888899999999998863 33333 4
Q ss_pred CCCEEEEEEcCCCCcEEEEEe--CCCcEEEEECCCCccccccc
Q 010769 449 AGAVFSVAFSEDSPFVLAIGG--SKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 449 ~~~v~~~~~spd~~~llasg~--~dg~i~vwd~~~~~~~~~~~ 489 (502)
...+.+++|+|++.++++++. .++.|++||+.+++.+....
T Consensus 199 ~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~ 241 (391)
T 1l0q_A 199 EAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIP 241 (391)
T ss_dssp SSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEE
T ss_pred CCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEe
Confidence 467999999999996444443 68999999999887765543
No 126
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.8e-26 Score=213.37 Aligned_cols=186 Identities=13% Similarity=0.139 Sum_probs=140.6
Q ss_pred CCCEEEEec--CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecC---CCCcEE
Q 010769 208 KGNFMAVGS--MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK---EFRNIL 282 (502)
Q Consensus 208 ~~~~la~g~--~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~---~~~~~l 282 (502)
+++++.+++ .++.|++|++... .+....+.+|...+..++|++ + +.+|
T Consensus 144 ~g~lv~ss~~g~d~~V~~~~~s~d--------------------------G~~~~s~~~~~~~v~~l~fs~~~g~-~~~L 196 (356)
T 2w18_A 144 KRRLVSSSGTLSDQQVEVMTFAED--------------------------GGGKENQFLMPPEETILTFAEVQGM-QEAL 196 (356)
T ss_dssp TTEEEEEESSSTTCEEEEEEECTT--------------------------SCEEEEEEECCCSSCEEEEEEEETS-TTEE
T ss_pred CCcEEEecccCCCCcEEEEEECCC--------------------------CceeeeeccCCCceeeEEeeccCCC-CceE
Confidence 577777744 6899999998531 112223447888999999998 4 5799
Q ss_pred EEEecCCcEEEEECCCCeeeEEeccCC---CCeEEEEEcCCCCcEE------------EEEECCCcEEEEeCCCCCCccc
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLEHHT---DKVQAVAWNHHSPQIL------------LSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~---~~v~~l~~~~~~~~~l------------~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
++|+.|++|+|||+.++++++++.+|. ..+.+++|+|++ .++ ++|+.|++|++||..++.....
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG-~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v 275 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMG-LLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGV 275 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETT-EEEEEEC------------CCEEEEEEETTTTEEEEE
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCC-CEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEE
Confidence 999999999999999999999997643 467888999998 655 6688999999999988765432
Q ss_pred eE-----eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCee-EEEEcCCCCCEEE
Q 010769 348 KW-----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVC-TISYNPLVPNLLA 421 (502)
Q Consensus 348 ~~-----~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~-~l~~sp~~~~~l~ 421 (502)
.. ++...+.+..++ ..++++++.||+|++||+.++ +.+.++.+|...+. +++|+|++ .+|+
T Consensus 276 ~~~~~p~Gh~~~~lsg~~s---g~~lASgS~DgTIkIWDl~tG---------k~l~tL~gH~~~vvs~vafSPDG-~~La 342 (356)
T 2w18_A 276 MLYCLPPGQAGRFLEGDVK---DHCAAAILTSGTIAIWDLLLG---------QCTALLPPVSDQHWSFVKWSGTD-SHLL 342 (356)
T ss_dssp EEECCCTTCCCCEEEEEEE---TTEEEEEETTSCEEEEETTTC---------SEEEEECCC--CCCCEEEECSSS-SEEE
T ss_pred EEeeccCCCcceeEccccC---CCEEEEEcCCCcEEEEECCCC---------cEEEEecCCCCCeEEEEEECCCC-CEEE
Confidence 21 222233333333 237899999999999999987 78889998987655 58999998 9999
Q ss_pred EEeCCCcEEEEEC
Q 010769 422 TGSTDKMVKLWDL 434 (502)
Q Consensus 422 t~s~dg~i~vwd~ 434 (502)
+|+.|++|+|||+
T Consensus 343 SGS~D~TIklWd~ 355 (356)
T 2w18_A 343 AGQKDGNIFVYHY 355 (356)
T ss_dssp EECTTSCEEEEEE
T ss_pred EEECCCcEEEecC
Confidence 9999999999985
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=2.6e-23 Score=213.76 Aligned_cols=312 Identities=11% Similarity=0.087 Sum_probs=216.4
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCC----CCCEEEEecC
Q 010769 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE----KGNFMAVGSM 217 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~----~~~~la~g~~ 217 (502)
+..+.|+|++++|++++.++ .+.+|....... . ..........|..+++ +| +|++|++++.
T Consensus 181 ~~~v~~spdg~~l~v~~~d~---~V~v~D~~~~t~---~--~~~~i~~g~~p~~va~-------sp~~~~dg~~l~v~~~ 245 (543)
T 1nir_A 181 VHISRMSASGRYLLVIGRDA---RIDMIDLWAKEP---T--KVAEIKIGIEARSVES-------SKFKGYEDRYTIAGAY 245 (543)
T ss_dssp EEEEEECTTSCEEEEEETTS---EEEEEETTSSSC---E--EEEEEECCSEEEEEEE-------CCSTTCTTTEEEEEEE
T ss_pred cceEEECCCCCEEEEECCCC---eEEEEECcCCCC---c--EEEEEecCCCcceEEe-------CCCcCCCCCEEEEEEc
Confidence 77899999999999998775 444444411322 1 2222223334455554 88 9999999985
Q ss_pred -CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccc-ceeeEEecCCCCcEEEEEecCCcEEEEE
Q 010769 218 -EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASADKQVKIWD 295 (502)
Q Consensus 218 -dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~Dg~v~vwd 295 (502)
+++|.|||..+...+..+...+. . ......|.. .+.++.++|+++.++++...+++|.+||
T Consensus 246 ~~~~v~v~D~~t~~~~~~i~~~g~----------------~-~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd 308 (543)
T 1nir_A 246 WPPQFAIMDGETLEPKQIVSTRGM----------------T-VDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVN 308 (543)
T ss_dssp ESSEEEEEETTTCCEEEEEECCEE----------------C-SSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEE
T ss_pred cCCeEEEEeccccccceeecccCc----------------c-cCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEE
Confidence 79999999876544332211100 0 000001333 7899999998788888999999999999
Q ss_pred CCCCeeeE--EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe----ecCCeEEEEeCCCCCCEEE
Q 010769 296 VAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 296 ~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~l~ 369 (502)
+.+.+.+. .+. +...+..+.|+|++..+++++..+++|.+||+.+++....... |.+....+ ++|++..+++
T Consensus 309 ~~~~~~l~~~~i~-~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~ 386 (543)
T 1nir_A 309 YKDIDNLTVTSIG-AAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWS 386 (543)
T ss_dssp CTTSSSCEEEEEE-CCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEE
T ss_pred ecCCCcceeEEec-cCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEE
Confidence 98876543 443 5667889999999943445556689999999998876543321 33333333 4676555666
Q ss_pred EEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe-------CCCcEEEEECCCCCee-
Q 010769 370 VSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQPS- 440 (502)
Q Consensus 370 ~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-------~dg~i~vwd~~~~~~~- 440 (502)
++. .+++|.+||+.+..... ...+.+.++..|...+..++++|++ ++|++++ .+++|.|||+.+.+..
T Consensus 387 s~~~~d~~V~v~d~~~~~~~~--~~~~~v~~l~~~g~~~~~v~~~pdg-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~ 463 (543)
T 1nir_A 387 TSHLGDGSISLIGTDPKNHPQ--YAWKKVAELQGQGGGSLFIKTHPKS-SHLYVDTTFNPDARISQSVAVFDLKNLDAKY 463 (543)
T ss_dssp EEBSSSSEEEEEECCTTTCTT--TBTSEEEEEECSCSCCCCEECCTTC-CEEEECCTTCSSHHHHTCEEEEETTCTTSCC
T ss_pred eccCCCceEEEEEeCCCCCch--hcCeEEEEEEcCCCCceEEEcCCCC-CcEEEecCCCCCcccCceEEEEECCCCCCCe
Confidence 665 68999999998721100 0037788999999999999999998 8888877 2679999999988743
Q ss_pred EEEE------ecCCCCCEEEEEEcCCCCcEEEEEe----CCCcEEEEECCCCcccccccc
Q 010769 441 CIAS------RNPKAGAVFSVAFSEDSPFVLAIGG----SKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 441 ~~~~------~~~~~~~v~~~~~spd~~~llasg~----~dg~i~vwd~~~~~~~~~~~~ 490 (502)
.... +..+...+..+.|+|+|.+++++.. .++.|.|||..+++++.++-.
T Consensus 464 ~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~~ 523 (543)
T 1nir_A 464 QVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVVKD 523 (543)
T ss_dssp EEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEEEEEECC
T ss_pred EEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceEEEeecC
Confidence 1211 1345678999999999998666543 479999999999998866553
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.92 E-value=4.2e-23 Score=212.14 Aligned_cols=287 Identities=12% Similarity=0.102 Sum_probs=208.7
Q ss_pred ccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEe
Q 010769 145 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIW 224 (502)
Q Consensus 145 ~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iw 224 (502)
..++|++.++++++.++ .|.+|+.... .+. ........+.++.+ +|+|++|++++.++.|++|
T Consensus 143 ~~~~p~~~~~vs~~~d~-----~V~v~D~~t~---~~~--~~i~~g~~~~~v~~-------spdg~~l~v~~~d~~V~v~ 205 (543)
T 1nir_A 143 NDLDLPNLFSVTLRDAG-----QIALVDGDSK---KIV--KVIDTGYAVHISRM-------SASGRYLLVIGRDARIDMI 205 (543)
T ss_dssp SCCCGGGEEEEEEGGGT-----EEEEEETTTC---CEE--EEEECSTTEEEEEE-------CTTSCEEEEEETTSEEEEE
T ss_pred cccCCCCEEEEEEcCCC-----eEEEEECCCc---eEE--EEEecCcccceEEE-------CCCCCEEEEECCCCeEEEE
Confidence 35889998888887776 5555565443 222 11111111344444 8999999999999999999
Q ss_pred eC--CCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecC----CCCcEEEEEe-cCCcEEEEECC
Q 010769 225 DL--DVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK----EFRNILASAS-ADKQVKIWDVA 297 (502)
Q Consensus 225 dl--~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~----~~~~~l~sgs-~Dg~v~vwd~~ 297 (502)
|+ .+...+ ..+. +...+.+++|+| ++ .+|++++ .+++|.|||..
T Consensus 206 D~~~~t~~~~---------------------------~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~ 256 (543)
T 1nir_A 206 DLWAKEPTKV---------------------------AEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGE 256 (543)
T ss_dssp ETTSSSCEEE---------------------------EEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETT
T ss_pred ECcCCCCcEE---------------------------EEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEecc
Confidence 99 432211 1111 335679999999 85 4677766 58999999999
Q ss_pred CCeeeEEecc----------CC-CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEeecCCeEEEEeCCCCC
Q 010769 298 AGKCNLTLEH----------HT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 298 ~~~~~~~~~~----------h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~v~~~p~~~ 365 (502)
+++++.++.. |. ..+.++.++|+++.++++...++.|.+||+.+.+... ....+...+..+.|+|++.
T Consensus 257 t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~ 336 (543)
T 1nir_A 257 TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHR 336 (543)
T ss_dssp TCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSC
T ss_pred ccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCC
Confidence 9999888754 22 3789999999887888888899999999998765433 1334556788999999987
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec----CCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECCCCC--
Q 010769 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ-- 438 (502)
Q Consensus 366 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~~~~-- 438 (502)
.+++++..++.|.+||+.++ +.+..+.. |.+....+ ++|++..++++++ .|++|.|||+.+..
T Consensus 337 ~l~va~~~~~~v~v~D~~tg---------~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~ 406 (543)
T 1nir_A 337 YFMTAANNSNKVAVIDSKDR---------RLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP 406 (543)
T ss_dssp EEEEEEGGGTEEEEEETTTT---------EEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT
T ss_pred EEEEEecCCCeEEEEECCCC---------eEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc
Confidence 55666667899999999987 55555553 55444443 4777547777776 58999999998711
Q ss_pred ---eeEEEEecCCCCCEEEEEEcCCCCcEEEEEe-------CCCcEEEEECCCCcccccc
Q 010769 439 ---PSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-------SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 439 ---~~~~~~~~~~~~~v~~~~~spd~~~llasg~-------~dg~i~vwd~~~~~~~~~~ 488 (502)
..++.++..|.+.+..++|+|++++ |++++ .+++|.|||+.+++.+.+.
T Consensus 407 ~~~~~~v~~l~~~g~~~~~v~~~pdg~~-l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~ 465 (543)
T 1nir_A 407 QYAWKKVAELQGQGGGSLFIKTHPKSSH-LYVDTTFNPDARISQSVAVFDLKNLDAKYQV 465 (543)
T ss_dssp TTBTSEEEEEECSCSCCCCEECCTTCCE-EEECCTTCSSHHHHTCEEEEETTCTTSCCEE
T ss_pred hhcCeEEEEEEcCCCCceEEEcCCCCCc-EEEecCCCCCcccCceEEEEECCCCCCCeEE
Confidence 2367888888888889999999996 66655 2679999999999877443
No 129
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.92 E-value=2.7e-23 Score=200.86 Aligned_cols=284 Identities=10% Similarity=0.139 Sum_probs=182.4
Q ss_pred CceEEEE-EecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-CcEEEeeCCC
Q 010769 151 DAVIVCA-RNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-PAIEIWDLDV 228 (502)
Q Consensus 151 ~~~l~~~-~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d-g~I~iwdl~~ 228 (502)
+++|+++ +.++ .+.+|.++... .+...........|.+++| +|++++|++++.+ +.|.+|+++.
T Consensus 4 ~~~l~~~~~~~~---~v~~~~~~~~~----~~~~~~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~v~~~~~~~ 69 (343)
T 1ri6_A 4 KQTVYIASPESQ---QIHVWNLNHEG----ALTLTQVVDVPGQVQPMVV-------SPDKRYLYVGVRPEFRVLAYRIAP 69 (343)
T ss_dssp EEEEEEEEGGGT---EEEEEEECTTS----CEEEEEEEECSSCCCCEEE-------CTTSSEEEEEETTTTEEEEEEECT
T ss_pred eEEEEEeCCCCC---eEEEEEECCCC----cEEEeeeEecCCCCceEEE-------CCCCCEEEEeecCCCeEEEEEecC
Confidence 3455555 4444 56666665321 2222222233445667777 8999998888876 9999999972
Q ss_pred CCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC---CCCeeeEEe
Q 010769 229 IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV---AAGKCNLTL 305 (502)
Q Consensus 229 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~---~~~~~~~~~ 305 (502)
.... ......+..+ ..+.+++|+|++..+++++..++.|.+||+ ...+.+..+
T Consensus 70 ~~~~-----------------------~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~ 125 (343)
T 1ri6_A 70 DDGA-----------------------LTFAAESALP-GSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV 125 (343)
T ss_dssp TTCC-----------------------EEEEEEEECS-SCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE
T ss_pred CCCc-----------------------eeeccccccC-CCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccc
Confidence 1110 0011111122 378999999995544445555899999999 444555555
Q ss_pred ccCCCCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCCC-CCCccc-----eEeecCCeEEEEeCCCCCCEEEEEeCCCeEE
Q 010769 306 EHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI-STHSGF-----KWAVAADVESLAWDPHAEHSFVVSLEDGTIK 378 (502)
Q Consensus 306 ~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~-~~~~~~-----~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~ 378 (502)
..+ ..+.+++|+|++ +++++++ .++.|.+||+.+ +..... .......+..++|+|++..+++++..++.|.
T Consensus 126 ~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~ 203 (343)
T 1ri6_A 126 EGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVD 203 (343)
T ss_dssp CCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEE
T ss_pred cCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEE
Confidence 543 468899999999 5566665 899999999987 433211 1112346889999999875556666899999
Q ss_pred EEECCCCCCCCCCCCCCccEEEec------CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC--CCCeeEEEEecCCCC
Q 010769 379 GFDIRTAKSDPDSTSQQSSFTLHA------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS--NNQPSCIASRNPKAG 450 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~--~~~~~~~~~~~~~~~ 450 (502)
+|++...... ......... ....+.+++|+|++..+++++..++.|++|++. ++....+.....+..
T Consensus 204 ~~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~ 278 (343)
T 1ri6_A 204 VWELKDPHGN-----IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ 278 (343)
T ss_dssp EEESSCTTSC-----CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS
T ss_pred EEEecCCCCc-----EEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc
Confidence 9999642110 011222221 123567899999984444466679999999998 444444444444433
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
+.+++|+|+++++++++..++.|.+|++.
T Consensus 279 -~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 279 -PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp -CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred -cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 88999999999755554478999999554
No 130
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=4.8e-23 Score=205.18 Aligned_cols=231 Identities=11% Similarity=0.113 Sum_probs=170.7
Q ss_pred CCEEEEecCC------CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 209 GNFMAVGSME------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 209 ~~~la~g~~d------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+..++.++.+ +.|++||++... ...+.+|...|.+++|+|+ +..|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~----------------------------~~~l~~~~~~v~~~~~Spd-g~~l 193 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYN----------------------------QFVVHRSPQPLMSPAWSPD-GSKL 193 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCS----------------------------CEEEEEESSCEEEEEECTT-SSEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCC----------------------------CEEEeCCCCcceeeEEcCC-CCEE
Confidence 5666666554 799999986311 1123368889999999999 5588
Q ss_pred EEEecCC---cEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCc--EEEEeCCCCCCccceEeecCCeEE
Q 010769 283 ASASADK---QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRS--VVMKDARISTHSGFKWAVAADVES 357 (502)
Q Consensus 283 ~sgs~Dg---~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~--i~vwd~~~~~~~~~~~~~~~~v~~ 357 (502)
++++.++ .|++||+.++++. .+..|...+.+++|+|++..++++++.++. |++||++++... ....+...+.+
T Consensus 194 a~~s~~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~ 271 (415)
T 2hqs_A 194 AYVTFESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR-QVTDGRSNNTE 271 (415)
T ss_dssp EEEECTTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE-ECCCCSSCEEE
T ss_pred EEEEecCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE-eCcCCCCcccc
Confidence 8888875 9999999998875 466688899999999999434447776665 999999886653 34456778999
Q ss_pred EEeCCCCCCEEEEEe-CCC--eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC---CcEEE
Q 010769 358 LAWDPHAEHSFVVSL-EDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD---KMVKL 431 (502)
Q Consensus 358 v~~~p~~~~~l~~~~-~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d---g~i~v 431 (502)
++|+|++. .+++++ .++ .|++||+.++ ....+..|...+.+++|+|++ ++|++++.+ ..|++
T Consensus 272 ~~~spdg~-~l~~~s~~~g~~~i~~~d~~~~----------~~~~l~~~~~~~~~~~~spdG-~~l~~~~~~~g~~~i~~ 339 (415)
T 2hqs_A 272 PTWFPDSQ-NLAFTSDQAGRPQVYKVNINGG----------APQRITWEGSQNQDADVSSDG-KFMVMVSSNGGQQHIAK 339 (415)
T ss_dssp EEECTTSS-EEEEEECTTSSCEEEEEETTSS----------CCEECCCSSSEEEEEEECTTS-SEEEEEEECSSCEEEEE
T ss_pred eEECCCCC-EEEEEECCCCCcEEEEEECCCC----------CEEEEecCCCcccCeEECCCC-CEEEEEECcCCceEEEE
Confidence 99999987 455544 455 6777788765 234455677789999999998 777776654 58999
Q ss_pred EECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC---cEEEEECCCCcccccc
Q 010769 432 WDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLSDAGISNR 488 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg---~i~vwd~~~~~~~~~~ 488 (502)
||+.+++. ..+..+. .+.+++|+|+|++ |++++.++ .|++||+.++ .+.++
T Consensus 340 ~d~~~~~~---~~l~~~~-~~~~~~~spdg~~-l~~~s~~~~~~~l~~~d~~g~-~~~~l 393 (415)
T 2hqs_A 340 QDLATGGV---QVLSSTF-LDETPSLAPNGTM-VIYSSSQGMGSVLNLVSTDGR-FKARL 393 (415)
T ss_dssp EETTTCCE---EECCCSS-SCEEEEECTTSSE-EEEEEEETTEEEEEEEETTSC-CEEEC
T ss_pred EECCCCCE---EEecCCC-CcCCeEEcCCCCE-EEEEEcCCCccEEEEEECCCC-cEEEe
Confidence 99998873 3344443 7999999999996 55566555 7999998743 34443
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.92 E-value=2.8e-22 Score=193.20 Aligned_cols=284 Identities=8% Similarity=0.010 Sum_probs=189.1
Q ss_pred ccccCCCceE-EEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC-CCcEE
Q 010769 145 MTINPNDAVI-VCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-EPAIE 222 (502)
Q Consensus 145 ~~~~p~~~~l-~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~-dg~I~ 222 (502)
..|.++++.+ +++..++ .|++|+.... .+....... ...+ ++.| +|+|++|++++. ++.|.
T Consensus 3 ~~~~~~~~~~~v~~~~~~-----~v~~~d~~~~---~~~~~~~~~-~~~~-~~~~-------s~dg~~l~~~~~~~~~i~ 65 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLR-----RISFFSTDTL---EILNQITLG-YDFV-DTAI-------TSDCSNVVVTSDFCQTLV 65 (331)
T ss_dssp ----CCCCEEEEEEGGGT-----EEEEEETTTC---CEEEEEECC-CCEE-EEEE-------CSSSCEEEEEESTTCEEE
T ss_pred eeEcCCCCEEEEEecCCC-----eEEEEeCccc---ceeeeEEcc-CCcc-eEEE-------cCCCCEEEEEeCCCCeEE
Confidence 3456666654 4444444 6666665544 222211111 1122 5555 899987666655 88999
Q ss_pred EeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCC---cEEEEECCCC
Q 010769 223 IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK---QVKIWDVAAG 299 (502)
Q Consensus 223 iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg---~v~vwd~~~~ 299 (502)
+||+...... ...+..+..++.+++|+|++ .+|+++..++ .|.+||+.++
T Consensus 66 ~~d~~~~~~~--------------------------~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~ 118 (331)
T 3u4y_A 66 QIETQLEPPK--------------------------VVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKN 118 (331)
T ss_dssp EEECSSSSCE--------------------------EEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTT
T ss_pred EEECCCCcee--------------------------EEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCC
Confidence 9999754320 11122344555559999995 4666555543 8999999999
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCc-EEEEeCCCCCCcc----ceEeecCCeEEEEeCCCCCCEEEEEeCC
Q 010769 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRS-VVMKDARISTHSG----FKWAVAADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~-i~vwd~~~~~~~~----~~~~~~~~v~~v~~~p~~~~~l~~~~~d 374 (502)
+.+..+.. ...+.+++|+|++..++++...++. |.+|++....... ........+..++|+|++..+++++..+
T Consensus 119 ~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~ 197 (331)
T 3u4y_A 119 KFISTIPI-PYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIG 197 (331)
T ss_dssp EEEEEEEC-CTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTT
T ss_pred CeEEEEEC-CCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCC
Confidence 98888764 4457899999999556666677788 9999998644321 1223345689999999987666667779
Q ss_pred CeEEEEECCCCCCCCCCCCCCc---cEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC---
Q 010769 375 GTIKGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK--- 448 (502)
Q Consensus 375 g~i~i~d~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~--- 448 (502)
+.|++||+.++ .. +..+. +...+..++|+|++..++++...++.|.+||+.+++...+.....+
T Consensus 198 ~~v~v~d~~~~---------~~~~~~~~~~-~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~ 267 (331)
T 3u4y_A 198 NSIGILETQNP---------ENITLLNAVG-TNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLI 267 (331)
T ss_dssp TEEEEEECSST---------TSCEEEEEEE-CSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCC
T ss_pred CeEEEEECCCC---------cccceeeecc-CCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeeccccccccc
Confidence 99999999876 33 55555 3466789999999833445555678899999998875444433322
Q ss_pred -CC---CEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 449 -AG---AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 449 -~~---~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
.. ....++|+|+++++++++..++.|.+||+.+..
T Consensus 268 ~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 268 DPRPLFGANQMALNKTETKLFISANISRELKVFTISGKV 306 (331)
T ss_dssp CCGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCE
T ss_pred CCCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCc
Confidence 11 224589999999766777777899999997654
No 132
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=1.5e-22 Score=217.12 Aligned_cols=293 Identities=10% Similarity=0.121 Sum_probs=203.9
Q ss_pred ccccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCceeeeeccccC---------------------CCccee
Q 010769 139 SEDLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIIIP---------------------AFPLCM 196 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~---------------------~~~~~~ 196 (502)
...+.+++|+|+|++|++++. +++.....||+|+...+....+..++... + ....++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVL-PGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC---------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcc-cccccccchhhhhhhhhhhccccCccee
Confidence 346889999999999999987 54333456777776554222222222111 0 012334
Q ss_pred eeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecC
Q 010769 197 AWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNK 276 (502)
Q Consensus 197 ~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~ 276 (502)
.| ||+|++|++++. +.|++|++...... ....+..|...+.+++|+|
T Consensus 115 ~~-------SpDg~~l~~~~~-~~i~~~d~~~~~~~-------------------------~~~~l~~~~~~~~~~~~SP 161 (741)
T 2ecf_A 115 QW-------SPDAQRLLFPLG-GELYLYDLKQEGKA-------------------------AVRQLTHGEGFATDAKLSP 161 (741)
T ss_dssp EE-------CTTSSEEEEEET-TEEEEEESSSCSTT-------------------------SCCBCCCSSSCEEEEEECT
T ss_pred EE-------CCCCCEEEEEeC-CcEEEEECCCCCcc-------------------------eEEEcccCCcccccccCCC
Confidence 44 999999999986 99999999753100 1112335778899999999
Q ss_pred CCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCC----------------eEEEEEcCCCCcEEEEEECCC--------
Q 010769 277 EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDK----------------VQAVAWNHHSPQILLSGSFDR-------- 332 (502)
Q Consensus 277 ~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~----------------v~~l~~~~~~~~~l~s~~~dg-------- 332 (502)
++ .+|++++ ++.|++||+.+++.......+... +.++.|+|+| +.|++++.++
T Consensus 162 DG-~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d~~~~~~~~~ 238 (741)
T 2ecf_A 162 KG-GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARIDESPVPVQKR 238 (741)
T ss_dssp TS-SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEECTTSCEEEE
T ss_pred CC-CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCC-CEEEEEEEcCCCCceEec
Confidence 94 5787777 469999999998876655444432 4789999999 7777776655
Q ss_pred -------------------------cEEEEeCCC-CCCccceE--eecCCeEEEEeCCCCCCEEEEEe----CCCeEEEE
Q 010769 333 -------------------------SVVMKDARI-STHSGFKW--AVAADVESLAWDPHAEHSFVVSL----EDGTIKGF 380 (502)
Q Consensus 333 -------------------------~i~vwd~~~-~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~----~dg~i~i~ 380 (502)
.|.+||+.+ ++...... .+...+.+++| |++..+++++. .++.|++|
T Consensus 239 ~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~ 317 (741)
T 2ecf_A 239 YEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEV 317 (741)
T ss_dssp EEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEE
T ss_pred CCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEE
Confidence 788999987 66433222 24567899999 99874444433 35679999
Q ss_pred ECCCCCCCCCCCCCCccEEEecCCC----CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEE-
Q 010769 381 DIRTAKSDPDSTSQQSSFTLHAHDK----AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSV- 455 (502)
Q Consensus 381 d~~~~~~~~~~~~~~~~~~~~~h~~----~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~- 455 (502)
|+.++ .....+..+.. .+.+++|+|++ +++++++.+|.++||.+..... ...+..+...|.++
T Consensus 318 d~~~g---------~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~~~~~~--~~~l~~~~~~v~~~~ 385 (741)
T 2ecf_A 318 TLASN---------QQRVLAHETSPTWVPLHNSLRFLDDG-SILWSSERTGFQHLYRIDSKGK--AAALTHGNWSVDELL 385 (741)
T ss_dssp ETTTC---------CEEEEEEEECSSCCCCCSCCEECTTS-CEEEEECTTSSCEEEEECSSSC--EEESCCSSSCEEEEE
T ss_pred ECCCC---------ceEEEEEcCCCCcCCcCCceEECCCC-eEEEEecCCCccEEEEEcCCCC--eeeeeecceEEEeEe
Confidence 99876 44444444443 45789999998 6899999999888887763222 45566677778887
Q ss_pred EEcCCCCcEEEEEeCCC--cEEEEECCC
Q 010769 456 AFSEDSPFVLAIGGSKG--KLEIWDTLS 481 (502)
Q Consensus 456 ~~spd~~~llasg~~dg--~i~vwd~~~ 481 (502)
.|+|+++.++++++.++ .++||++..
T Consensus 386 ~~s~dg~~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 386 AVDEKAGLAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp EEETTTTEEEEEECSSCTTCBEEEEEET
T ss_pred EEeCCCCEEEEEEeCCCCceEEEEEEEc
Confidence 59999997666776666 899999864
No 133
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.91 E-value=9.8e-22 Score=195.72 Aligned_cols=268 Identities=15% Similarity=0.034 Sum_probs=186.6
Q ss_pred CccccccccccC--------------CCceEEEEEecCCc-ceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCC
Q 010769 138 DSEDLEDMTINP--------------NDAVIVCARNEDDV-SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCP 202 (502)
Q Consensus 138 ~~~~v~~~~~~p--------------~~~~l~~~~~~~~~-~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~ 202 (502)
|...+..+++++ .+..|+.++..... ..-.|++|+........+.. |. ....+++|
T Consensus 116 ~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~-~~----~~v~~~~~---- 186 (415)
T 2hqs_A 116 NKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHR-SP----QPLMSPAW---- 186 (415)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEE-ES----SCEEEEEE----
T ss_pred ChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCCCCCEEEeC-CC----CcceeeEE----
Confidence 556677777775 15555555544211 01245555543322222223 32 23467777
Q ss_pred CCCCCCCCEEEEecCCC---cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCC
Q 010769 203 LKDREKGNFMAVGSMEP---AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg---~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
+|+|++||+++.++ .|++||+.++... .+..|...+.+++|+|++.
T Consensus 187 ---Spdg~~la~~s~~~~~~~i~~~d~~tg~~~----------------------------~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 187 ---SPDGSKLAYVTFESGRSALVIQTLANGAVR----------------------------QVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp ---CTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------------------EEECCSSCEEEEEECTTSS
T ss_pred ---cCCCCEEEEEEecCCCcEEEEEECCCCcEE----------------------------EeecCCCcccCEEEcCCCC
Confidence 89999999999875 9999999753211 2235777899999999965
Q ss_pred cEEEEEecCCc--EEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEEC-CC--cEEEEeCCCCCCccceEeecCC
Q 010769 280 NILASASADKQ--VKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF-DR--SVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 280 ~~l~sgs~Dg~--v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-dg--~i~vwd~~~~~~~~~~~~~~~~ 354 (502)
.++++++.++. |++||+.++++ ..+..|...+.+++|+|++ +.|++++. ++ .|.+||+.++.... ...+...
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg-~~l~~~s~~~g~~~i~~~d~~~~~~~~-l~~~~~~ 312 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDS-QNLAFTSDQAGRPQVYKVNINGGAPQR-ITWEGSQ 312 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSSCCEE-CCCSSSE
T ss_pred EEEEEEecCCCceEEEEECCCCCE-EeCcCCCCcccceEECCCC-CEEEEEECCCCCcEEEEEECCCCCEEE-EecCCCc
Confidence 44447777665 99999998876 5677788899999999999 66776665 45 67777888765432 2334567
Q ss_pred eEEEEeCCCCCCEEEEEeC--CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC---cE
Q 010769 355 VESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---MV 429 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---~i 429 (502)
+.+++|+|++..+++++.. ++.|++||+.++ .. ..+..|. .+.+++|+|++ ++|++++.++ .|
T Consensus 313 ~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~---------~~-~~l~~~~-~~~~~~~spdg-~~l~~~s~~~~~~~l 380 (415)
T 2hqs_A 313 NQDADVSSDGKFMVMVSSNGGQQHIAKQDLATG---------GV-QVLSSTF-LDETPSLAPNG-TMVIYSSSQGMGSVL 380 (415)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEETTTC---------CE-EECCCSS-SCEEEEECTTS-SEEEEEEEETTEEEE
T ss_pred ccCeEECCCCCEEEEEECcCCceEEEEEECCCC---------CE-EEecCCC-CcCCeEEcCCC-CEEEEEEcCCCccEE
Confidence 8899999998744444443 358999999875 22 3455554 89999999998 7787777766 79
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCc
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
++||+.... ...+..|.+.|.+++|+|.-.|
T Consensus 381 ~~~d~~g~~---~~~l~~~~~~v~~~~~~~~~~~ 411 (415)
T 2hqs_A 381 NLVSTDGRF---KARLPATDGQVKFPAWSPYLHH 411 (415)
T ss_dssp EEEETTSCC---EEECCCSSSEEEEEEECCCCCC
T ss_pred EEEECCCCc---EEEeeCCCCCCcCCcccccccc
Confidence 999998654 5667888899999999997543
No 134
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.89 E-value=8.9e-21 Score=184.05 Aligned_cols=291 Identities=11% Similarity=0.102 Sum_probs=186.0
Q ss_pred eEEEEEec-CCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC--CCcEEEeeCCCC
Q 010769 153 VIVCARNE-DDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM--EPAIEIWDLDVI 229 (502)
Q Consensus 153 ~l~~~~~~-~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~--dg~I~iwdl~~~ 229 (502)
.+++|+.. +....+.+|.++...+ .+...........|..++| +|+|++++++.. ++.|.+|++...
T Consensus 4 ~~~vg~y~~~~~~~i~v~~~d~~tg---~~~~~~~~~~~~~p~~~a~-------spdg~l~~~~~~~~~~~v~~~~~~~g 73 (347)
T 3hfq_A 4 RILFGTYTKKTSQGIYQGTLDTTAK---TLTNDGLLAATQNPTYLAL-------SAKDCLYSVDKEDDEGGIAAWQIDGQ 73 (347)
T ss_dssp EEEEEECCSSSCCEEEEEEEETTTT---EEEEEEEEEECSCCCCEEE-------CTTCEEEEEEEETTEEEEEEEEEETT
T ss_pred EEEEEeccCCCCCCEEEEEEcCCCC---eEEEeeeeeccCCcceEEE-------ccCCeEEEEEecCCCceEEEEEecCC
Confidence 34555432 2223678888887655 3332222222344555655 899994444432 689999998542
Q ss_pred CCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe-cCCcEEEEECCC-C--eeeEEe
Q 010769 230 DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWDVAA-G--KCNLTL 305 (502)
Q Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~Dg~v~vwd~~~-~--~~~~~~ 305 (502)
.. .....+..+...+..++|+|++. +|++++ .+++|.+|++.. + +.+..+
T Consensus 74 ~~-------------------------~~~~~~~~~~~~p~~~a~spdg~-~l~~~~~~~~~v~v~~~~~~g~~~~~~~~ 127 (347)
T 3hfq_A 74 TA-------------------------HKLNTVVAPGTPPAYVAVDEARQ-LVYSANYHKGTAEVMKIAADGALTLTDTV 127 (347)
T ss_dssp EE-------------------------EEEEEEEEESCCCSEEEEETTTT-EEEEEETTTTEEEEEEECTTSCEEEEEEE
T ss_pred cE-------------------------EEeeeeecCCCCCEEEEECCCCC-EEEEEeCCCCEEEEEEeCCCCCeeeccee
Confidence 21 11111224667789999999954 666666 789999999962 3 333333
Q ss_pred cc---------CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE----eecCCeEEEEeCCCCCCEEEEEe
Q 010769 306 EH---------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW----AVAADVESLAWDPHAEHSFVVSL 372 (502)
Q Consensus 306 ~~---------h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~----~~~~~v~~v~~~p~~~~~l~~~~ 372 (502)
.. +...+.+++|+|++ +++++...++.|.+|++.......... .....+..++|+|++..+++++.
T Consensus 128 ~~~~~~p~~~~~~~~~~~~~~spdg-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~ 206 (347)
T 3hfq_A 128 QHSGHGPRPEQDGSHIHYTDLTPDN-RLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGE 206 (347)
T ss_dssp ECCCCCSSTTCSSCCEEEEEECTTS-CEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ecCCCCCCccccCCCceEEEECCCC-cEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeC
Confidence 21 12348899999999 577777778999999998322221111 12336788999999875666677
Q ss_pred CCCeEEEEECCCCCCCCCCCCCCccEEEecCC------CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CCeeEEEEe
Q 010769 373 EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD------KAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASR 445 (502)
Q Consensus 373 ~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~------~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~~~~~~~~ 445 (502)
.++.|.+|++...... ...+..+.... ..+..++|+|+|..+++++..++.|.+|++.. +....+...
T Consensus 207 ~~~~v~v~~~~~~~g~-----~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~ 281 (347)
T 3hfq_A 207 LSSQIASLKYDTQTGA-----FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQI 281 (347)
T ss_dssp TTTEEEEEEEETTTTE-----EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEE
T ss_pred CCCEEEEEEecCCCCc-----eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEE
Confidence 8899999998752100 01222333222 34888999999833446677789999999973 344455555
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEE--ECCCCccc
Q 010769 446 NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW--DTLSDAGI 485 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~llasg~~dg~i~vw--d~~~~~~~ 485 (502)
..+...+..++|+|+++++++++..++.|.+| |..+++..
T Consensus 282 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l~ 323 (347)
T 3hfq_A 282 STEGDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKLS 323 (347)
T ss_dssp ECSSSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred ecCCCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeEE
Confidence 65566688999999999755555556899999 44555543
No 135
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.5e-21 Score=184.01 Aligned_cols=253 Identities=12% Similarity=0.076 Sum_probs=176.1
Q ss_pred EEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCC-CCCCCceeeeCCcchhh
Q 010769 167 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDV-IDEVQPHVILGGIDEEK 245 (502)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~-~~~~~~~~~l~~~~~~~ 245 (502)
.|++|+........+..| ...+.++.| +|+|++|++++ ++.|++|++.. .....
T Consensus 23 ~i~~~d~~~~~~~~~~~~-----~~~v~~~~~-------spdg~~l~~~~-~~~i~~~d~~~~~~~~~------------ 77 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQT-----PELFEAPNW-------SPDGKYLLLNS-EGLLYRLSLAGDPSPEK------------ 77 (297)
T ss_dssp EEEEEETTTTEEEEEEEE-----SSCCEEEEE-------CTTSSEEEEEE-TTEEEEEESSSCCSCEE------------
T ss_pred eEEEEeCCCCceeeeccC-----CcceEeeEE-------CCCCCEEEEEc-CCeEEEEeCCCCCCceE------------
Confidence 555565544321122222 334467777 89999999987 78999999975 32211
Q ss_pred hhhccccCCccccccccCCc-ccceeeEEecCCCCcEEEEEe--cCCcEEEE--ECCCCeeeEEeccCCCCeEEEEEcCC
Q 010769 246 KKKKSKKGKKSSIKYKKGSH-TDSVLGLAWNKEFRNILASAS--ADKQVKIW--DVAAGKCNLTLEHHTDKVQAVAWNHH 320 (502)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~~h-~~~V~~l~~~~~~~~~l~sgs--~Dg~v~vw--d~~~~~~~~~~~~h~~~v~~l~~~~~ 320 (502)
....| ...|.+++|+|+ +.+|++++ .++.+.|| ++.+++ ...+..+ ..+.+++|+|+
T Consensus 78 ---------------~~~~~~~~~~~~~~~spd-g~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~-~~~~~~~~spd 139 (297)
T 2ojh_A 78 ---------------VDTGFATICNNDHGISPD-GALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKN-LPSYWHGWSPD 139 (297)
T ss_dssp ---------------CCCTTCCCBCSCCEECTT-SSEEEEEECTTTSSCEEEEEETTCCC-CEECCSS-SSEEEEEECTT
T ss_pred ---------------eccccccccccceEECCC-CCEEEEEEeCCCCcceEEEEECCCCc-eEEeecC-CCccceEECCC
Confidence 11123 477899999999 45788887 33445555 545554 3445433 35899999999
Q ss_pred CCcEEEEEECCCcEEEEeCCCCC-CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEE
Q 010769 321 SPQILLSGSFDRSVVMKDARIST-HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 321 ~~~~l~s~~~dg~i~vwd~~~~~-~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
+..++++++.++.+.+|++.... .......+...+.+++|+|++..+++++..++.+++|++... ......
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~--------~~~~~~ 211 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD--------GSSVER 211 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT--------SSCEEE
T ss_pred CCEEEEEECCCCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCC--------CCCcEE
Confidence 94455588899999999965332 222234556789999999998754555556899999998743 245667
Q ss_pred EecCCCCeeEEEEcCCCCCEEEEEeCC-----------CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEE
Q 010769 400 LHAHDKAVCTISYNPLVPNLLATGSTD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg 468 (502)
+..|...+.+++|+|++ .+|++++.+ +.|++||+.+++...+.....|...+.+++|+|+++++++++
T Consensus 212 ~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 290 (297)
T 2ojh_A 212 ITDSAYGDWFPHPSPSG-DKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVR 290 (297)
T ss_dssp CCCCSEEEEEEEECTTS-SEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEE
T ss_pred EecCCcccCCeEECCCC-CEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEE
Confidence 77788889999999998 777777665 569999999887666666667778899999999999755544
Q ss_pred eCC
Q 010769 469 GSK 471 (502)
Q Consensus 469 ~~d 471 (502)
..+
T Consensus 291 ~~~ 293 (297)
T 2ojh_A 291 YFP 293 (297)
T ss_dssp ECC
T ss_pred ecc
Confidence 443
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.89 E-value=1.6e-20 Score=182.21 Aligned_cols=286 Identities=11% Similarity=0.064 Sum_probs=195.1
Q ss_pred ccccccccccCCCceEEEEEecCCc--ceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEE-EEe
Q 010769 139 SEDLEDMTINPNDAVIVCARNEDDV--SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFM-AVG 215 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~~--~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~l-a~g 215 (502)
...+..++|+|+++.|++++..+.. ..-.|++|+.... .+. ........|.++.| +|+|+++ +++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~---~~~--~~~~~~~~~~~~~~-------s~dg~~l~v~~ 107 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL---EVT--QAIHNDLKPFGATI-------NNTTQTLWFGN 107 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC---CEE--EEEEESSCCCSEEE-------ETTTTEEEEEE
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC---eEE--EEEecCCCcceEEE-------CCCCCEEEEEe
Confidence 3457789999999999888754210 0126777776554 222 11223344566666 7888855 455
Q ss_pred cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe--cCCcEEE
Q 010769 216 SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS--ADKQVKI 293 (502)
Q Consensus 216 ~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs--~Dg~v~v 293 (502)
..++.|.+||+.+.........-.. . .........+.+++|+|++. ++++++ .++.|.+
T Consensus 108 ~~~~~v~~~d~~~~~~~~~~~~~~~---------------~---~~~~~~~~~~~~~~~s~dg~-~l~~~~~~~~~~i~~ 168 (353)
T 3vgz_A 108 TVNSAVTAIDAKTGEVKGRLVLDDR---------------K---RTEEVRPLQPRELVADDATN-TVYISGIGKESVIWV 168 (353)
T ss_dssp TTTTEEEEEETTTCCEEEEEESCCC---------------C---CCSSCCCCEEEEEEEETTTT-EEEEEEESSSCEEEE
T ss_pred cCCCEEEEEeCCCCeeEEEEecCCC---------------c---cccccCCCCCceEEECCCCC-EEEEEecCCCceEEE
Confidence 6679999999976543222110000 0 00001112378899999965 454444 5789999
Q ss_pred EECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe----ecCCeEEEEeCCCCCCEEE
Q 010769 294 WDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA----VAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 294 wd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~----~~~~v~~v~~~p~~~~~l~ 369 (502)
||+.+++.+..+..+...+.+++|+|++ ..|++++.++.|.+||+.+.+....... +...+..++|+|++..+++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 247 (353)
T 3vgz_A 169 VDGGNIKLKTAIQNTGKMSTGLALDSEG-KRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFI 247 (353)
T ss_dssp EETTTTEEEEEECCCCTTCCCCEEETTT-TEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEE
T ss_pred EcCCCCceEEEecCCCCccceEEECCCC-CEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEE
Confidence 9999999998887666678999999999 7888888899999999988765543222 2345778999999875555
Q ss_pred EEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC
Q 010769 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA 449 (502)
Q Consensus 370 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~ 449 (502)
+...++.|.+||+.++ ..+..+..+. ..+++|+|++..++++...++.|.+||+.+++. +..+.. .
T Consensus 248 ~~~~~~~v~~~d~~~~---------~~~~~~~~~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~--~~~~~~-~ 313 (353)
T 3vgz_A 248 TDSKAAEVLVVDTRNG---------NILAKVAAPE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKV--VKTFDT-P 313 (353)
T ss_dssp EESSSSEEEEEETTTC---------CEEEEEECSS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEE--EEEEEC-C
T ss_pred EeCCCCEEEEEECCCC---------cEEEEEEcCC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeE--EEEEec-C
Confidence 6666799999999876 4555555433 267999999844556666799999999998874 333333 3
Q ss_pred CCEEEEEEcCCCCcEEEEEeC
Q 010769 450 GAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 450 ~~v~~~~~spd~~~llasg~~ 470 (502)
..+.+++|+|++++++++...
T Consensus 314 ~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 314 THPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp SEEEEEEECTTSCEEEEEEEC
T ss_pred CCCCeEEEcCCCCEEEEEEcc
Confidence 468999999999975555544
No 137
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.89 E-value=3.1e-21 Score=192.93 Aligned_cols=218 Identities=11% Similarity=0.103 Sum_probs=150.4
Q ss_pred ccccccccccCCCceEEEEEecCCcceeEEEEEecCCC------CCCceee---eeccccCCCcceeeeecCCCCCCCCC
Q 010769 139 SEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG------GDPNLYV---HHHIIIPAFPLCMAWLDCPLKDREKG 209 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~------~~~~l~~---~~~~~~~~~~~~~~w~~~~~~~s~~~ 209 (502)
...++.++++|++.+|++++.++ +.||....... ....+.. ......+..+.+++| +|+|
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg----v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~-------spdg 104 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG----LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLAL-------SCDN 104 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE----EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEE-------CTTS
T ss_pred CCCccEEEEecCCCEEEEECCCE----EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEE-------cCCC
Confidence 44689999999999999987653 45543321100 0001110 011223444577777 8999
Q ss_pred CEEE----EecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 210 NFMA----VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 210 ~~la----~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
++|| +|+.|+.|+|||+....... ....+.......+.+|...|.+|+|+|+.+++|++|
T Consensus 105 ~~lav~~~sgs~d~~v~iwd~~~~~~~~----------------~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 105 LTLSACMMSSEYGSIIAFFDVRTFSNEA----------------KQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp CEEEEEEEETTTEEEEEEEEHHHHHCTT----------------CSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred CEEEEEEeccCCCceEEEEEccccccCC----------------cCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 9999 78999999999986420000 000001112334567999999999999867899999
Q ss_pred ecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee-------cCCeEEE
Q 010769 286 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-------AADVESL 358 (502)
Q Consensus 286 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~v 358 (502)
+.||+|++||++++..+....+|...|++++|+|++ .+|++|+.||+|++||++ .........+ ...+.++
T Consensus 169 s~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg-~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 169 LADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKG-KQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp ETTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTS-SCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred ECCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCC-CEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 999999999999998777777789999999999998 899999999999999998 3322211111 2378999
Q ss_pred EeCCCCCCEEEEEeCCC------eEEEEECCCC
Q 010769 359 AWDPHAEHSFVVSLEDG------TIKGFDIRTA 385 (502)
Q Consensus 359 ~~~p~~~~~l~~~~~dg------~i~i~d~~~~ 385 (502)
+|++++..+++.+..+| .+++|++++.
T Consensus 247 ~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 247 LWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99986543333344443 3899999875
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.88 E-value=1.9e-20 Score=199.63 Aligned_cols=296 Identities=13% Similarity=0.074 Sum_probs=195.8
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
..|.+++|+|+ +.++++. ++ .||+|+.... .+.... .....+.++.| ||+|++||++ .++
T Consensus 82 ~~v~~~~~spd-~~~~~~~-~~-----~i~~~d~~~~---~~~~l~--~~~~~~~~~~~-------SpdG~~la~~-~~~ 141 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT-QG-----GLVGFDMLAR---KVTYLF--DTNEETASLDF-------SPVGDRVAYV-RNH 141 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE-TT-----EEEEEETTTT---EEEEEE--CCTTCCTTCEE-------CTTSSEEEEE-ETT
T ss_pred cCceeEEECCC-CeEEEEE-CC-----EEEEEECCCC---ceEEcc--CCcccccCCcC-------CCCCCEEEEE-ECC
Confidence 46899999999 6666654 34 6666665544 221111 01222345555 8999999995 679
Q ss_pred cEEEeeCCC-----CCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe--------
Q 010769 220 AIEIWDLDV-----IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-------- 286 (502)
Q Consensus 220 ~I~iwdl~~-----~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-------- 286 (502)
.|++|++.. +..... ...+. . ....... ....+...+.+++|+|++ .+|++++
T Consensus 142 ~i~v~~~~~~~~~~g~~~~~-~~~~~-~----------~~~~g~~-~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~ 207 (706)
T 2z3z_A 142 NLYIARGGKLGEGMSRAIAV-TIDGT-E----------TLVYGQA-VHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKP 207 (706)
T ss_dssp EEEEEECBCTTSCCCCCEES-CSCCB-T----------TEEESSC-CGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCC
T ss_pred eEEEEecCcccccCCCcEEe-ccCCC-C----------CeEcccc-hhhhhcCCCceEEECCCC-CEEEEEEECCCCCce
Confidence 999999975 332110 00000 0 0000000 111223446899999994 5777776
Q ss_pred -------------------------cCCcEEEEECCCCeeeEEec--cCCCCeEEEEEcCCCCcEEEEEECCC-----cE
Q 010769 287 -------------------------ADKQVKIWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDR-----SV 334 (502)
Q Consensus 287 -------------------------~Dg~v~vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg-----~i 334 (502)
.+..|++||+.+++...... .|...+.+++|+|++ +.|++++.++ .|
T Consensus 208 ~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~v 286 (706)
T 2z3z_A 208 TPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDE-NILYVAEVNRAQNECKV 286 (706)
T ss_dssp EEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTS-SEEEEEEECTTSCEEEE
T ss_pred EEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCC-CEEEEEEeCCCCCeeEE
Confidence 44679999999988655442 467789999999999 7777777665 89
Q ss_pred EEEeCCCCCCccceEee--cC---CeEEEEeCC--CCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCe
Q 010769 335 VMKDARISTHSGFKWAV--AA---DVESLAWDP--HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 407 (502)
Q Consensus 335 ~vwd~~~~~~~~~~~~~--~~---~v~~v~~~p--~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v 407 (502)
++||+.++......... .. .+.+++|+| ++. +++++..+|.+++|.+... ...+..+..|...+
T Consensus 287 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~g~~~l~~~~~~--------~~~~~~l~~~~~~v 357 (706)
T 2z3z_A 287 NAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRDGWNHLYLYDTT--------GRLIRQVTKGEWEV 357 (706)
T ss_dssp EEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTTSSCEEEEEETT--------SCEEEECCCSSSCE
T ss_pred EEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccCCccEEEEEECC--------CCEEEecCCCCeEE
Confidence 99999887333222221 21 246789999 876 7888888999999988632 25566677777778
Q ss_pred eE-EEEcCCCCCEEEEEeCCC----cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC---CcEEEEEC
Q 010769 408 CT-ISYNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDT 479 (502)
Q Consensus 408 ~~-l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d---g~i~vwd~ 479 (502)
.. ++|+|++..++++++.++ .|..||+.++... .+ .+...+.+++|+|++++++++++.. +.|++||+
T Consensus 358 ~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~~~---~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~ 433 (706)
T 2z3z_A 358 TNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGKTK---DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNI 433 (706)
T ss_dssp EEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCCCE---ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEES
T ss_pred EeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCCce---ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEEC
Confidence 77 799999844445555555 6777788776532 22 2556799999999999755554544 56999999
Q ss_pred CCCc
Q 010769 480 LSDA 483 (502)
Q Consensus 480 ~~~~ 483 (502)
.+++
T Consensus 434 ~~~~ 437 (706)
T 2z3z_A 434 GKGS 437 (706)
T ss_dssp SSCE
T ss_pred CCCe
Confidence 8876
No 139
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.88 E-value=3.9e-21 Score=181.12 Aligned_cols=228 Identities=10% Similarity=0.031 Sum_probs=167.2
Q ss_pred EecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEE
Q 010769 214 VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 214 ~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~v 293 (502)
.++.++.|++||+..... ..+..|...|.+++|+|+ +.+|++++ ++.|++
T Consensus 17 ~~~~~~~i~~~d~~~~~~----------------------------~~~~~~~~~v~~~~~spd-g~~l~~~~-~~~i~~ 66 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKM----------------------------RVVWQTPELFEAPNWSPD-GKYLLLNS-EGLLYR 66 (297)
T ss_dssp -CCCCEEEEEEETTTTEE----------------------------EEEEEESSCCEEEEECTT-SSEEEEEE-TTEEEE
T ss_pred CCCcceeEEEEeCCCCce----------------------------eeeccCCcceEeeEECCC-CCEEEEEc-CCeEEE
Confidence 456789999999874221 122357889999999999 55787776 789999
Q ss_pred EECCC-CeeeEEeccC-CCCeEEEEEcCCCCcEEEEEE--CCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEE
Q 010769 294 WDVAA-GKCNLTLEHH-TDKVQAVAWNHHSPQILLSGS--FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFV 369 (502)
Q Consensus 294 wd~~~-~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~ 369 (502)
||+.+ ++....+..+ ...+.+++|+|++ ++|++++ .++.+.||.+...............+.+++|+|++..+++
T Consensus 67 ~d~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~ 145 (297)
T 2ojh_A 67 LSLAGDPSPEKVDTGFATICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTY 145 (297)
T ss_dssp EESSSCCSCEECCCTTCCCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEE
T ss_pred EeCCCCCCceEeccccccccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEE
Confidence 99999 8777666555 4788999999999 7888888 3345555555332222223334445889999999886666
Q ss_pred EEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECC-CCCeeEEEEecC
Q 010769 370 VSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLS-NNQPSCIASRNP 447 (502)
Q Consensus 370 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~-~~~~~~~~~~~~ 447 (502)
++..++.+++|++... ......+..|...+.+++|+|++ .+|++++ .++.+++|++. ... ....+..
T Consensus 146 ~~~~~~~~~l~~~~~~--------~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~~~~~~~~--~~~~~~~ 214 (297)
T 2ojh_A 146 CGIRDQVFDIYSMDID--------SGVETRLTHGEGRNDGPDYSPDG-RWIYFNSSRTGQMQIWRVRVDGS--SVERITD 214 (297)
T ss_dssp EEEETTEEEEEEEETT--------TCCEEECCCSSSCEEEEEECTTS-SEEEEEECTTSSCEEEEEETTSS--CEEECCC
T ss_pred EECCCCceEEEEEECC--------CCcceEcccCCCccccceECCCC-CEEEEEecCCCCccEEEECCCCC--CcEEEec
Confidence 8888999999997543 23445667788899999999998 6555544 68999999886 333 3455666
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCC-----------CcEEEEECCCCcc
Q 010769 448 KAGAVFSVAFSEDSPFVLAIGGSK-----------GKLEIWDTLSDAG 484 (502)
Q Consensus 448 ~~~~v~~~~~spd~~~llasg~~d-----------g~i~vwd~~~~~~ 484 (502)
+...+.+++|+|++++ |++++.+ +.|++||+.+++.
T Consensus 215 ~~~~~~~~~~s~dg~~-l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 215 SAYGDWFPHPSPSGDK-VVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp CSEEEEEEEECTTSSE-EEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred CCcccCCeEECCCCCE-EEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 7778999999999996 5555544 5699999988765
No 140
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.88 E-value=5.7e-20 Score=179.43 Aligned_cols=294 Identities=10% Similarity=0.121 Sum_probs=185.1
Q ss_pred cccCCCceEEEEEecC-CcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC----Cc
Q 010769 146 TINPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME----PA 220 (502)
Q Consensus 146 ~~~p~~~~l~~~~~~~-~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d----g~ 220 (502)
...+...++++|+... ....+.+|.++...+ .+...... ....|..++| +|+|++|++++.+ +.
T Consensus 8 ~~~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g---~~~~~~~~-~~~~p~~l~~-------spdg~~l~~~~~~~~~~~~ 76 (361)
T 3scy_A 8 STTDSELTMLVGTYTSGNSKGIYTFRFNEETG---ESLPLSDA-EVANPSYLIP-------SADGKFVYSVNEFSKDQAA 76 (361)
T ss_dssp CGGGGEEEEEEEECCSSSCCEEEEEEEETTTC---CEEEEEEE-ECSCCCSEEE-------CTTSSEEEEEECCSSTTCE
T ss_pred hhCCCceEEEEEeccCCCCCCEEEEEEeCCCC---CEEEeecc-cCCCCceEEE-------CCCCCEEEEEEccCCCCCc
Confidence 3445556677775432 234677888876655 33332222 3344556666 8999999998875 79
Q ss_pred EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCe
Q 010769 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 300 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~ 300 (502)
|.+|+++..... .........+......+++ +++.++++...+++|.+|++....
T Consensus 77 v~~~~~~~~~g~-----------------------~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g 131 (361)
T 3scy_A 77 VSAFAFDKEKGT-----------------------LHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG 131 (361)
T ss_dssp EEEEEEETTTTE-----------------------EEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS
T ss_pred EEEEEEeCCCCc-----------------------EEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC
Confidence 999998642110 0111111224456777888 534344444468899999997543
Q ss_pred eeEEe------cc--------CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC------c-------cceEeecC
Q 010769 301 CNLTL------EH--------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH------S-------GFKWAVAA 353 (502)
Q Consensus 301 ~~~~~------~~--------h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~------~-------~~~~~~~~ 353 (502)
.+..+ .+ +...+.+++|+|++..+++++..++.|.+|++..... . ........
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 211 (361)
T 3scy_A 132 ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGS 211 (361)
T ss_dssp CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTC
T ss_pred cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCC
Confidence 32211 11 1234688999999933455555689999999876542 1 11122345
Q ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe---cCCCCeeEEEEcCCCCCEEEEEeC--CCc
Q 010769 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPLVPNLLATGST--DKM 428 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~~~~~l~t~s~--dg~ 428 (502)
.+..++|+|++..+++++..++.|.+|++.++. ...+..+. .+......++|+|++ ++|+++.. ++.
T Consensus 212 ~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-------~~~~~~~~~~~~~~~~~~~i~~spdg-~~l~v~~~~~~~~ 283 (361)
T 3scy_A 212 GPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-------LDEIQTVAADTVNAQGSGDIHLSPDG-KYLYASNRLKADG 283 (361)
T ss_dssp CEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-------EEEEEEEESCSSCCCCEEEEEECTTS-SEEEEEECSSSCE
T ss_pred CCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-------eEEeEEEecCCCCCCCcccEEECCCC-CEEEEECCCCCCE
Confidence 678999999987444445479999999998541 12222232 233456899999998 66655554 589
Q ss_pred EEEEECC--CCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC--CCCcc
Q 010769 429 VKLWDLS--NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT--LSDAG 484 (502)
Q Consensus 429 i~vwd~~--~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~--~~~~~ 484 (502)
|.+|++. +++...+..... ...+.+++|+|+|+++++++..++.|.+|.+ .+++.
T Consensus 284 i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 284 VAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 9999996 455444444444 4567899999999975555557789999655 45544
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=5e-20 Score=177.79 Aligned_cols=278 Identities=10% Similarity=0.089 Sum_probs=178.6
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
+...+..++|+|++++|++++.++ ..+.+|.++...+ .+...........|.++.| +|++++|++++.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~--~~v~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-------s~dg~~l~~~~~ 103 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPE--FRVLAYRIAPDDG---ALTFAAESALPGSLTHIST-------DHQGQFVFVGSY 103 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTT--TEEEEEEECTTTC---CEEEEEEEECSSCCSEEEE-------CTTSSEEEEEET
T ss_pred cCCCCceEEECCCCCEEEEeecCC--CeEEEEEecCCCC---ceeeccccccCCCCcEEEE-------cCCCCEEEEEec
Confidence 345688899999999998888763 3667777763333 3332222333445667777 799998876654
Q ss_pred -CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe-cCCcEEEEE
Q 010769 218 -EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-ADKQVKIWD 295 (502)
Q Consensus 218 -dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~Dg~v~vwd 295 (502)
++.|.+|++..+.. ........ ....+.+++|+|++. +|++++ .++.|++||
T Consensus 104 ~~~~i~~~d~~~~~~------------------------~~~~~~~~-~~~~~~~~~~s~dg~-~l~~~~~~~~~v~~~d 157 (343)
T 1ri6_A 104 NAGNVSVTRLEDGLP------------------------VGVVDVVE-GLDGCHSANISPDNR-TLWVPALKQDRICLFT 157 (343)
T ss_dssp TTTEEEEEEEETTEE------------------------EEEEEEEC-CCTTBCCCEECTTSS-EEEEEEGGGTEEEEEE
T ss_pred CCCeEEEEECCCCcc------------------------cccccccc-CCCCceEEEECCCCC-EEEEecCCCCEEEEEE
Confidence 78999999841110 01111111 234588999999955 555555 899999999
Q ss_pred CCC-CeeeE----Eecc-CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC--CCCccceE-e-e------cCCeEEEE
Q 010769 296 VAA-GKCNL----TLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGFKW-A-V------AADVESLA 359 (502)
Q Consensus 296 ~~~-~~~~~----~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~--~~~~~~~~-~-~------~~~v~~v~ 359 (502)
+.+ ++... .+.. ....+.+++|+|++..+++++..++.|.+|++.. +....... . . ...+..++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ 237 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIH 237 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceE
Confidence 987 65432 2222 3457889999999943445555899999999964 22211111 1 1 12466899
Q ss_pred eCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe-CCCcEEEE--ECCC
Q 010769 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLW--DLSN 436 (502)
Q Consensus 360 ~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vw--d~~~ 436 (502)
|+|++..+++++..++.|.+|++...... ...+..+..+.. +.+++|+|++ ++|++++ .++.|.+| |..+
T Consensus 238 ~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-----~~~~~~~~~~~~-~~~~~~s~dg-~~l~~~~~~~~~v~v~~~d~~~ 310 (343)
T 1ri6_A 238 ITPDGRHLYACDRTASLITVFSVSEDGSV-----LSKEGFQPTETQ-PRGFNVDHSG-KYLIAAGQKSHHISVYEIVGEQ 310 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEEECTTSCC-----EEEEEEEECSSS-CCCEEECTTS-SEEEEECTTTCEEEEEEEETTT
T ss_pred ECCCCCEEEEEecCCCEEEEEEEcCCCCc-----eEEeeeecCCCc-cceEEECCCC-CEEEEecCCCCeEEEEEEcCCC
Confidence 99998755556668999999999842100 133444444444 8999999998 6666665 68999999 4446
Q ss_pred CCeeEEEEecCCCCCEEEEEEcCCC
Q 010769 437 NQPSCIASRNPKAGAVFSVAFSEDS 461 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~ 461 (502)
++...+..+... ....+++|.|+.
T Consensus 311 g~~~~~~~~~~g-~~p~~i~~~~~~ 334 (343)
T 1ri6_A 311 GLLHEKGRYAVG-QGPMWVVVNAHE 334 (343)
T ss_dssp TEEEEEEEEECS-SSCCEEEEEEEC
T ss_pred ceeeEccccccC-CCCeeEEEEccc
Confidence 654444444432 335566666543
No 142
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=1.8e-20 Score=180.48 Aligned_cols=238 Identities=10% Similarity=0.076 Sum_probs=173.7
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..+++++.++.|++||+.++..... ...+...+ +++|+|++..+++++..
T Consensus 9 ~~~~~v~~~~~~~v~~~d~~~~~~~~~---------------------------~~~~~~~~-~~~~s~dg~~l~~~~~~ 60 (331)
T 3u4y_A 9 SNFGIVVEQHLRRISFFSTDTLEILNQ---------------------------ITLGYDFV-DTAITSDCSNVVVTSDF 60 (331)
T ss_dssp CCEEEEEEGGGTEEEEEETTTCCEEEE---------------------------EECCCCEE-EEEECSSSCEEEEEEST
T ss_pred CCEEEEEecCCCeEEEEeCcccceeee---------------------------EEccCCcc-eEEEcCCCCEEEEEeCC
Confidence 355578888899999999976432211 11234455 99999996545555555
Q ss_pred CCcEEEEECCCCee-eEEeccCCCCeEEEEEcCCCCcEEEEEECCC---cEEEEeCCCCCCccceEeecCCeEEEEeCCC
Q 010769 288 DKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDR---SVVMKDARISTHSGFKWAVAADVESLAWDPH 363 (502)
Q Consensus 288 Dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg---~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~ 363 (502)
++.|.+||+.+++. ...+..+..+..+++|+|++ ++|+++..++ .|.+||+.+.+... .........+++|+|+
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~spd 138 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAISPN 138 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEECTT
T ss_pred CCeEEEEECCCCceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEECCC
Confidence 89999999999987 77777676666669999999 6677555543 89999998876544 3455667899999999
Q ss_pred CCCEEEEEeCCCe-EEEEECCCCCCCCCCCCCCcc---EEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010769 364 AEHSFVVSLEDGT-IKGFDIRTAKSDPDSTSQQSS---FTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 364 ~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~---~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
+..+++++..++. |.+|++.... ... .....+...+.+++|+|++..+++++..++.|++||+.+++.
T Consensus 139 g~~l~~~~~~~~~~i~~~~~~~~g--------~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 139 GNGLILIDRSSANTVRRFKIDADG--------VLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp SSCEEEEEETTTTEEEEEEECTTC--------CEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred CCEEEEEecCCCceEEEEEECCCC--------cEeecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 8877777777788 9999998541 111 222234556899999999844556666789999999998874
Q ss_pred -eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 440 -SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 440 -~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
..+..+.. ...+..++|+|+|++++++...++.|.+||+.+++.
T Consensus 211 ~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 11333433 356788999999997666666678899999998876
No 143
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.87 E-value=8e-21 Score=203.02 Aligned_cols=290 Identities=9% Similarity=0.017 Sum_probs=187.0
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC--
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-- 218 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d-- 218 (502)
.+.+++|+|+|+++++ +.++ .|++|+...+....+..+|... ...+.+++| ||+|++||+++.+
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg-----~i~~~d~~~g~~~~~~~~~~~~-~~~v~~~~~-------SpDg~~l~~~~~~~~ 83 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKG-----TVRLWNVETNTSTVLIEGKKIE-SLRAIRYEI-------SPDREYALFSYNVEP 83 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSS-----CEEEBCGGGCCCEEEECTTTTT-TTTCSEEEE-------CTTSSEEEEEESCCC
T ss_pred cccccEEcCCCcEEEE-eCCC-----CEEEEECCCCcEEEEecccccc-ccccceEEE-------CCCCCEEEEEecCcc
Confidence 4678999999997765 4444 4555555444222333333211 001345555 8999999999764
Q ss_pred -------CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 219 -------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 219 -------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
+.|.+||+.++.. . ......+|...+.+++|+|++ +.||+++. +.|
T Consensus 84 ~~~~~~~~~i~~~d~~~~~~-~------------------------~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i 136 (723)
T 1xfd_A 84 IYQHSYTGYYVLSKIPHGDP-Q------------------------SLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNI 136 (723)
T ss_dssp CSSSCCCSEEEEEESSSCCC-E------------------------ECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEE
T ss_pred ceeecceeeEEEEECCCCce-E------------------------eccCCccccccccccEECCCC-CEEEEEEC-CeE
Confidence 7788999976432 0 011123566679999999994 57777776 799
Q ss_pred EEEECCCCeeeEEeccCCCCe------------------EEEEEcCCCCcEEEEEECCC---------------------
Q 010769 292 KIWDVAAGKCNLTLEHHTDKV------------------QAVAWNHHSPQILLSGSFDR--------------------- 332 (502)
Q Consensus 292 ~vwd~~~~~~~~~~~~h~~~v------------------~~l~~~~~~~~~l~s~~~dg--------------------- 332 (502)
++|++.+++.......+...+ .+++|+|+| +.|++++.++
T Consensus 137 ~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (723)
T 1xfd_A 137 YYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSIYPTVKP 215 (723)
T ss_dssp EEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSSSCCCEE
T ss_pred EEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcCCCccee
Confidence 999999988776665444333 789999999 7777776543
Q ss_pred -------------cEEEEeCCCCCCccceEee------cCCeEEEEeCCCCCCEEEEEeC----CCeEEEEECCCCCCCC
Q 010769 333 -------------SVVMKDARISTHSGFKWAV------AADVESLAWDPHAEHSFVVSLE----DGTIKGFDIRTAKSDP 389 (502)
Q Consensus 333 -------------~i~vwd~~~~~~~~~~~~~------~~~v~~v~~~p~~~~~l~~~~~----dg~i~i~d~~~~~~~~ 389 (502)
.|++||+.++........+ ...+.+++|+|++. ++++... +..|++||+.++
T Consensus 216 ~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~~d~~~g---- 290 (723)
T 1xfd_A 216 YHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTLCDATTG---- 290 (723)
T ss_dssp EECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEEEETTTC----
T ss_pred ccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEEEeCCCC----
Confidence 7999999877643222222 45688999999986 5544432 357999999876
Q ss_pred CCCCCCccEEEe-cCCCCe----eEEEEcCCCCCEEEE-EeCCC------cEEEEE-CCCCCeeEEEEecCCCCCEEE-E
Q 010769 390 DSTSQQSSFTLH-AHDKAV----CTISYNPLVPNLLAT-GSTDK------MVKLWD-LSNNQPSCIASRNPKAGAVFS-V 455 (502)
Q Consensus 390 ~~~~~~~~~~~~-~h~~~v----~~l~~sp~~~~~l~t-~s~dg------~i~vwd-~~~~~~~~~~~~~~~~~~v~~-~ 455 (502)
.....+. .+...+ ..++|+|+|..++++ +..++ .|.+|| ...+...+...+..+...+.. +
T Consensus 291 -----~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~ 365 (723)
T 1xfd_A 291 -----VCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKIL 365 (723)
T ss_dssp -----CEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEE
T ss_pred -----cceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeee
Confidence 3333333 234444 378999999555554 55677 577777 344431012223333344554 6
Q ss_pred EEcCCCCcEEEEEeCC--CcEEEEECCCC
Q 010769 456 AFSEDSPFVLAIGGSK--GKLEIWDTLSD 482 (502)
Q Consensus 456 ~~spd~~~llasg~~d--g~i~vwd~~~~ 482 (502)
+|+|+++++++++..+ +.++||++...
T Consensus 366 ~~spdg~~l~~~~~~~~~~~~~l~~~~~~ 394 (723)
T 1xfd_A 366 AYDEKGNKIYFLSTEDLPRRRQLYSANTV 394 (723)
T ss_dssp EEETTTTEEEEEESSSCTTCCEEEEECSS
T ss_pred EEcCCCCEEEEEEcCCCCcceEEEEEeCC
Confidence 9999999755555555 78999998653
No 144
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.87 E-value=2.1e-20 Score=180.00 Aligned_cols=278 Identities=15% Similarity=0.157 Sum_probs=188.2
Q ss_pred ceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCC---CcceeeeecCCCCCCCCCCEE-EEecCCCcEEEeeCC
Q 010769 152 AVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFM-AVGSMEPAIEIWDLD 227 (502)
Q Consensus 152 ~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~w~~~~~~~s~~~~~l-a~g~~dg~I~iwdl~ 227 (502)
++|++++.++ .|++|+.... .+. ....++. .|.++.| +|+++++ ++++.++.|.+||+.
T Consensus 2 ~~~v~~~~~~-----~v~~~d~~~~---~~~--~~~~~~~~~~~~~~~~~-------s~dg~~l~v~~~~~~~v~~~d~~ 64 (337)
T 1pby_B 2 DYILAPARPD-----KLVVIDTEKM---AVD--KVITIADAGPTPMVPMV-------APGGRIAYATVNKSESLVKIDLV 64 (337)
T ss_dssp EEEEEEETTT-----EEEEEETTTT---EEE--EEEECTTCTTCCCCEEE-------CTTSSEEEEEETTTTEEEEEETT
T ss_pred cEEEEcCCCC-----eEEEEECCCC---cEE--EEEEcCCCCCCccceEE-------cCCCCEEEEEeCCCCeEEEEECC
Confidence 4677887776 6666665543 221 1122233 3566666 7898765 556667899999997
Q ss_pred CCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe------------cCCcEEEEE
Q 010769 228 VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS------------ADKQVKIWD 295 (502)
Q Consensus 228 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs------------~Dg~v~vwd 295 (502)
+......... + ....|...+.+++|+|++ .+|++++ .++.|.+||
T Consensus 65 ~~~~~~~~~~-~---------------------~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d 121 (337)
T 1pby_B 65 TGETLGRIDL-S---------------------TPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYD 121 (337)
T ss_dssp TCCEEEEEEC-C---------------------BTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEE
T ss_pred CCCeEeeEEc-C---------------------CcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEE
Confidence 6432211100 0 000133467899999995 4666665 579999999
Q ss_pred CCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC
Q 010769 296 VAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg 375 (502)
+.+++.+..+.. ...+.+++|+|++ ++|+++ ++.|.+||+.+.+.... .........+.|+|++..+++++..++
T Consensus 122 ~~~~~~~~~~~~-~~~~~~~~~s~dg-~~l~~~--~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~ 196 (337)
T 1pby_B 122 AETLSRRKAFEA-PRQITMLAWARDG-SKLYGL--GRDLHVMDPEAGTLVED-KPIQSWEAETYAQPDVLAVWNQHESSG 196 (337)
T ss_dssp TTTTEEEEEEEC-CSSCCCEEECTTS-SCEEEE--SSSEEEEETTTTEEEEE-ECSTTTTTTTBCCCBCCCCCCCCTTTT
T ss_pred CCCCcEEEEEeC-CCCcceeEECCCC-CEEEEe--CCeEEEEECCCCcEeee-eeccccCCCceeCCCccEEeeeccCCC
Confidence 999988877764 4568889999999 656666 68999999987764432 222221123478888775444443333
Q ss_pred -----------------------eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 376 -----------------------TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 376 -----------------------~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
.|.+||+.+.. .....+..+...+.+++|+|++ ++|+++ ++.|++|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~--------~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~ 265 (337)
T 1pby_B 197 VMATPFYTARKDIDPADPTAYRTGLLTMDLETGE--------MAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESF 265 (337)
T ss_dssp EEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC--------EEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEE
T ss_pred ceeeeeeccccccccccccccccceEEEeCCCCC--------ceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEE
Confidence 46899998762 2234455677788999999998 777777 6899999
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
|+.+++.. ..+.. ...+.+++|+|++++ |++++.++.|++||+.+++.+..+-
T Consensus 266 d~~~~~~~--~~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~i~v~d~~~~~~~~~~~ 318 (337)
T 1pby_B 266 DLEKNASI--KRVPL-PHSYYSVNVSTDGST-VWLGGALGDLAAYDAETLEKKGQVD 318 (337)
T ss_dssp ETTTTEEE--EEEEC-SSCCCEEEECTTSCE-EEEESBSSEEEEEETTTCCEEEEEE
T ss_pred ECCCCcCc--ceecC-CCceeeEEECCCCCE-EEEEcCCCcEEEEECcCCcEEEEEE
Confidence 99988743 33332 245789999999996 5566889999999999998776553
No 145
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.87 E-value=4.4e-21 Score=191.80 Aligned_cols=250 Identities=15% Similarity=0.169 Sum_probs=168.5
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEE--
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA-- 283 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~-- 283 (502)
++++.+|++|+.++ |+||+......... .+.. ..............|...|++++|+|++ ++|+
T Consensus 45 s~~~~~l~~~~~dg-v~v~~~~~~~~~~~---~~~~---------~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~lav~ 110 (434)
T 2oit_A 45 SNKYGLVFAGGASG-LQIFPTKNLLIQNK---PGDD---------PNKIVDKVQGLLVPMKFPIHHLALSCDN-LTLSAC 110 (434)
T ss_dssp ETTTTEEEEEETTE-EEEEEHHHHCCCCC---TTCC---------TTCEEECCCCEEECCSSCEEEEEECTTS-CEEEEE
T ss_pred ecCCCEEEEECCCE-EEEEEchHhhhhcc---cccC---------cccccccCccccccCCCcccEEEEcCCC-CEEEEE
Confidence 67889999999888 88987642111000 0000 0000000000112467789999999994 5777
Q ss_pred --EEecCCcEEEEECCCC--------e---eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe
Q 010769 284 --SASADKQVKIWDVAAG--------K---CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 284 --sgs~Dg~v~vwd~~~~--------~---~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~ 350 (502)
+|+.|++|+|||+.++ + .+..+.+|...|.+++|+|+++.+|++++.||+|++||+++.........
T Consensus 111 ~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~~~~~~~~ 190 (434)
T 2oit_A 111 MMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETVKVCATLP 190 (434)
T ss_dssp EEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSEEEEEEEC
T ss_pred EeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCcceeeccC
Confidence 7889999999998754 2 24556779999999999998558999999999999999998755444455
Q ss_pred ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-------CCCCeeEEEEcCCCCCEEEE-
Q 010769 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-------HDKAVCTISYNPLVPNLLAT- 422 (502)
Q Consensus 351 ~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-------h~~~v~~l~~sp~~~~~l~t- 422 (502)
|...|.+++|+|++. +|++|+.||.|++||++ + .....+.. |...|.+++|++++ .++++
T Consensus 191 ~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~---------~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~ 258 (434)
T 2oit_A 191 STVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-L---------QEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVY 258 (434)
T ss_dssp GGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-C---------CEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEE
T ss_pred CCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-C---------cccccccCCcccCCCCceeEEEEEEecCc-eEEEEE
Confidence 778999999999865 79999999999999998 3 22233332 33489999999976 55443
Q ss_pred EeCCCc------EEEEECCCCC---eeEEEEec-------CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 423 GSTDKM------VKLWDLSNNQ---PSCIASRN-------PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 423 ~s~dg~------i~vwd~~~~~---~~~~~~~~-------~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
++.+|. +++|+++... +.....+. ....+-..+.+.++...++++++..+.|.|.....
T Consensus 259 ~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~~ 333 (434)
T 2oit_A 259 AAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQS 333 (434)
T ss_dssp EETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEECT
T ss_pred ccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEecC
Confidence 444533 8999998652 11222211 22223334445577776667666667777777543
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=2.3e-20 Score=181.08 Aligned_cols=240 Identities=13% Similarity=0.085 Sum_probs=177.5
Q ss_pred CCCCCEEEEecC-------CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCC
Q 010769 206 REKGNFMAVGSM-------EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEF 278 (502)
Q Consensus 206 s~~~~~la~g~~-------dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~ 278 (502)
+|++++|++++. ++.|.+||+.+....... .....+.+++|+|++
T Consensus 49 s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~----------------------------~~~~~~~~~~~s~dg 100 (353)
T 3vgz_A 49 SQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI----------------------------HNDLKPFGATINNTT 100 (353)
T ss_dssp ETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE----------------------------EESSCCCSEEEETTT
T ss_pred CCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE----------------------------ecCCCcceEEECCCC
Confidence 789988888774 468999998754322111 122347889999996
Q ss_pred CcEEEEEecCCcEEEEECCCCeeeEEeccCCCC---------eEEEEEcCCCCcEEEEEE--CCCcEEEEeCCCCCCccc
Q 010769 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDK---------VQAVAWNHHSPQILLSGS--FDRSVVMKDARISTHSGF 347 (502)
Q Consensus 279 ~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~---------v~~l~~~~~~~~~l~s~~--~dg~i~vwd~~~~~~~~~ 347 (502)
..+++++..++.|.+||+.+++.+..+..+... +.++.|+|++ ..+++++ .++.|.+||+.+.+....
T Consensus 101 ~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~~~~~ 179 (353)
T 3vgz_A 101 QTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIKLKTA 179 (353)
T ss_dssp TEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTEEEEE
T ss_pred CEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCceEEE
Confidence 656677777899999999999988888654432 7899999999 5455444 478999999988765543
Q ss_pred eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec----CCCCeeEEEEcCCCCCEEEEE
Q 010769 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----HDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.......+.+++|+|++. .++++..++.|.+||+.+. .....+.. +...+.+++|+|++..++++.
T Consensus 180 ~~~~~~~~~~~~~s~dg~-~l~~~~~~~~i~~~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~ 249 (353)
T 3vgz_A 180 IQNTGKMSTGLALDSEGK-RLYTTNADGELITIDTADN---------KILSRKKLLDDGKEHFFINISLDTARQRAFITD 249 (353)
T ss_dssp ECCCCTTCCCCEEETTTT-EEEEECTTSEEEEEETTTT---------EEEEEEECCCSSSCCCEEEEEEETTTTEEEEEE
T ss_pred ecCCCCccceEEECCCCC-EEEEEcCCCeEEEEECCCC---------eEEEEEEcCCCCCCcccceEEECCCCCEEEEEe
Confidence 222455688999999876 6788888999999999876 45555543 455688899999984444555
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..++.|.+||+.+++....... .. ...++|+|++++++++...++.|.+||+.+++.+...
T Consensus 250 ~~~~~v~~~d~~~~~~~~~~~~--~~--~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~ 310 (353)
T 3vgz_A 250 SKAAEVLVVDTRNGNILAKVAA--PE--SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTF 310 (353)
T ss_dssp SSSSEEEEEETTTCCEEEEEEC--SS--CCCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEEc--CC--CceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEE
Confidence 5569999999998875333332 22 2568999999976777767899999999988876543
No 147
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.87 E-value=4e-20 Score=198.17 Aligned_cols=289 Identities=12% Similarity=0.121 Sum_probs=195.2
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCC---CCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDG---GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~---~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
..|.+++|+|+|++|++++. + .||+|+.... ....+..| ...+.++.| ||+|++||+++
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~-~-----~i~~~d~~~~~~~~~~~l~~~-----~~~~~~~~~-------SPDG~~la~~~ 170 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLG-G-----ELYLYDLKQEGKAAVRQLTHG-----EGFATDAKL-------SPKGGFVSFIR 170 (741)
T ss_dssp EESCCCEECTTSSEEEEEET-T-----EEEEEESSSCSTTSCCBCCCS-----SSCEEEEEE-------CTTSSEEEEEE
T ss_pred cCcceeEECCCCCEEEEEeC-C-----cEEEEECCCCCcceEEEcccC-----CcccccccC-------CCCCCEEEEEe
Confidence 45899999999999999886 3 6666665443 22222222 122355666 89999999987
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCc--------ccceeeEEecCCCCcEEEEEecC
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH--------TDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h--------~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
++.|++|++..+..... ... . .. ....++ ...+.+++|+|++ .+|++++.|
T Consensus 171 -~~~i~~~d~~~g~~~~~---~~~-------------~-~~--~~~~g~~~~v~~~~~~~~~~~~~SpDg-~~l~~~~~d 229 (741)
T 2ecf_A 171 -GRNLWVIDLASGRQMQL---TAD-------------G-ST--TIGNGIAEFVADEEMDRHTGYWWAPDD-SAIAYARID 229 (741)
T ss_dssp -TTEEEEEETTTTEEEEC---CCC-------------C-CS--SEEESCCCHHHHHHSCCCCSEEECTTS-SCEEEEEEE
T ss_pred -CCcEEEEecCCCCEEEe---ccC-------------C-cc--ceeccccceeeeeccccccceEECCCC-CEEEEEEEc
Confidence 46999999975322110 000 0 00 000011 1235889999995 577777766
Q ss_pred C---------------------------------cEEEEECCC-CeeeEEec--cCCCCeEEEEEcCCCCcEEEEEEC--
Q 010769 289 K---------------------------------QVKIWDVAA-GKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF-- 330 (502)
Q Consensus 289 g---------------------------------~v~vwd~~~-~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~-- 330 (502)
+ .|++||+.+ ++...... .|...+.+++| |+| +.|++++.
T Consensus 230 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg-~~l~~~~~~~ 307 (741)
T 2ecf_A 230 ESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDP-QHLSFQRQSR 307 (741)
T ss_dssp CTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EET-TEEEEEEEET
T ss_pred CCCCceEecCCCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCC-CEEEEEEecc
Confidence 5 889999988 87654443 47788999999 999 66665543
Q ss_pred ---CCcEEEEeCCCCCCccceEeecC----CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC
Q 010769 331 ---DRSVVMKDARISTHSGFKWAVAA----DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH 403 (502)
Q Consensus 331 ---dg~i~vwd~~~~~~~~~~~~~~~----~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h 403 (502)
+..|++||+.++........+.. .+..++|+|++. +++++..+|.+++|.+... .. ...+..|
T Consensus 308 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~--------~~-~~~l~~~ 377 (741)
T 2ecf_A 308 DQKKLDLVEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSK--------GK-AAALTHG 377 (741)
T ss_dssp TSSEEEEEEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSS--------SC-EEESCCS
T ss_pred cCCeEEEEEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCC--------CC-eeeeeec
Confidence 56799999998776543333332 346899999987 8888899998888877633 24 6667778
Q ss_pred CCCeeEE-EEcCCCCCEEEEEeCCC--cEEEEECCC-CCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC---CcEEE
Q 010769 404 DKAVCTI-SYNPLVPNLLATGSTDK--MVKLWDLSN-NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEI 476 (502)
Q Consensus 404 ~~~v~~l-~~sp~~~~~l~t~s~dg--~i~vwd~~~-~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d---g~i~v 476 (502)
...+..+ .|+|++..++++++.++ .++||++.. +. ....+.. ...+.+++|+|++++++++++.. ..+.+
T Consensus 378 ~~~v~~~~~~s~dg~~l~~~~~~~~~~~~~l~~~~~~g~--~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l 454 (741)
T 2ecf_A 378 NWSVDELLAVDEKAGLAYFRAGIESARESQIYAVPLQGG--QPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIEL 454 (741)
T ss_dssp SSCEEEEEEEETTTTEEEEEECSSCTTCBEEEEEETTCC--CCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEE
T ss_pred ceEEEeEeEEeCCCCEEEEEEeCCCCceEEEEEEEcCCC--Ceeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEE
Confidence 8888887 59999844555666665 899998864 32 2233333 56688999999999765555543 46889
Q ss_pred EECCCC
Q 010769 477 WDTLSD 482 (502)
Q Consensus 477 wd~~~~ 482 (502)
|+...+
T Consensus 455 ~~~~~~ 460 (741)
T 2ecf_A 455 FRANGE 460 (741)
T ss_dssp EETTSC
T ss_pred EEcCCC
Confidence 987543
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.86 E-value=5.7e-20 Score=204.16 Aligned_cols=290 Identities=12% Similarity=0.093 Sum_probs=210.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|...+.++.|+|+ .+++++..++ ...||.++........+. +|. . ..+..| +|+|++||++.
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg---~~~l~~~~~~g~~~~~l~-~~~----~-~~~~~~-------SpDG~~la~~~ 263 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDG---FGQIYSTDLDGKDLRKHT-SFT----D-YYPRHL-------NTDGRRILFSK 263 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTS---SCEEEEEETTSCSCEECC-CCC----S-SCEEEE-------EESSSCEEEEE
T ss_pred CCCCcccceEEeCC-EEEEEEeccC---ceEEEEEeCCCCcceEec-CCC----C-cceeeE-------cCCCCEEEEEe
Confidence 46778899999988 5555554443 568999886443211222 221 1 123344 78999999984
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEec-CCCCcEEEEEecCCcEEEEE
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN-KEFRNILASASADKQVKIWD 295 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~~l~sgs~Dg~v~vwd 295 (502)
++.|.+|++... .+ ..+... ..........|...|.+++|+ |+ +..|++++ ++.|.+|+
T Consensus 264 -~~~i~~~d~~~~-~l---~~l~~~-------------~~~~~~~~~~~~~~v~~~~~S~pd-G~~la~~~-~~~i~~~~ 323 (1045)
T 1k32_A 264 -GGSIYIFNPDTE-KI---EKIEIG-------------DLESPEDRIISIPSKFAEDFSPLD-GDLIAFVS-RGQAFIQD 323 (1045)
T ss_dssp -TTEEEEECTTTC-CE---EECCCC-------------CCCBCCSEEEECGGGGEEEEEECG-GGCEEEEE-TTEEEEEC
T ss_pred -CCEEEEecCCce-Ee---eeeccC-------------cccccccccccccccceeeecCCC-CCEEEEEE-cCEEEEEc
Confidence 899999998321 11 111100 000011122466789999999 99 45677776 78999999
Q ss_pred CCCCeeeEEeccCCC-CeEEEEEcCCCCcEEEEEECCCcEE-EEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeC
Q 010769 296 VAAGKCNLTLEHHTD-KVQAVAWNHHSPQILLSGSFDRSVV-MKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 296 ~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~~dg~i~-vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~ 373 (502)
+..+... .+..|.. .+.+++|+ ++ ..|++++.++.+. +|++......... .+...+.+++|+|++. .+++++.
T Consensus 324 ~~~~~~~-~~~~~~~~~~~~~~~s-dg-~~l~~~s~~~~l~~~~d~~~~~~~~l~-~~~~~~~~~~~SpDG~-~la~~~~ 398 (1045)
T 1k32_A 324 VSGTYVL-KVPEPLRIRYVRRGGD-TK-VAFIHGTREGDFLGIYDYRTGKAEKFE-ENLGNVFAMGVDRNGK-FAVVAND 398 (1045)
T ss_dssp TTSSBEE-ECSCCSCEEEEEECSS-SE-EEEEEEETTEEEEEEEETTTCCEEECC-CCCCSEEEEEECTTSS-EEEEEET
T ss_pred CCCCceE-EccCCCcceEEeeeEc-CC-CeEEEEECCCceEEEEECCCCCceEec-CCccceeeeEECCCCC-EEEEECC
Confidence 9887654 4666777 89999999 87 7888888888888 8998876544433 5667899999999876 7888899
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC----------cEEEEECCCCCeeEEE
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK----------MVKLWDLSNNQPSCIA 443 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg----------~i~vwd~~~~~~~~~~ 443 (502)
++.|++||+.++ ........|...+.+++|+|+| ++|++++.++ .|++||+.+++ ..
T Consensus 399 ~~~v~~~d~~tg---------~~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~---~~ 465 (1045)
T 1k32_A 399 RFEIMTVDLETG---------KPTVIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK---IF 465 (1045)
T ss_dssp TSEEEEEETTTC---------CEEEEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE---EE
T ss_pred CCeEEEEECCCC---------ceEEeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc---EE
Confidence 999999999876 4555556899999999999998 7777776544 89999999875 45
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.+..|...+.+++|+|+|++ |++++.++...+|+....
T Consensus 466 ~l~~~~~~~~~~~~spdG~~-l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 466 AATTENSHDYAPAFDADSKN-LYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp ECSCSSSBEEEEEECTTSCE-EEEEESCCCCCEECSSSS
T ss_pred EeeCCCcccCCceEcCCCCE-EEEEecccCCcCcchhcc
Confidence 66677788999999999995 777888888888886543
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.86 E-value=1.2e-19 Score=175.70 Aligned_cols=248 Identities=11% Similarity=0.044 Sum_probs=170.4
Q ss_pred CCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 203 LKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 203 ~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+++++++.++++++.++.|++||+.+....... . .++...+..++|+|++..++
T Consensus 5 ~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~-------------------------~-~~~~~~~~~~~~s~dg~~~~ 58 (349)
T 1jmx_B 5 PALKAGHEYMIVTNYPNNLHVVDVASDTVYKSC-------------------------V-MPDKFGPGTAMMAPDNRTAY 58 (349)
T ss_dssp CCCCTTCEEEEEEETTTEEEEEETTTTEEEEEE-------------------------E-CSSCCSSCEEEECTTSSEEE
T ss_pred ccccCCCEEEEEeCCCCeEEEEECCCCcEEEEE-------------------------e-cCCCCCCceeEECCCCCEEE
Confidence 344778999999999999999999753321110 0 01222578899999965556
Q ss_pred EEEecCCcEEEEECCCCeeeEEeccCC------CCeEEEEEcCCCCcEEEEEECC------------CcEEEEeCCCCCC
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLEHHT------DKVQAVAWNHHSPQILLSGSFD------------RSVVMKDARISTH 344 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~~h~------~~v~~l~~~~~~~~~l~s~~~d------------g~i~vwd~~~~~~ 344 (502)
+++..++.|.+||+.+++.+..+..+. ..+.+++|+|++ ++|++++.+ +.|.+||+.+++.
T Consensus 59 v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 137 (349)
T 1jmx_B 59 VLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE 137 (349)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG
T ss_pred EEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCC-CEEEEEcccccccccccccCCCeEEEEECCCccc
Confidence 677788999999999998887775332 237889999999 777777754 8999999987543
Q ss_pred cc--ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCC-------------------------c-
Q 010769 345 SG--FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQ-------------------------S- 396 (502)
Q Consensus 345 ~~--~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-------------------------~- 396 (502)
.. ....+...+.+++|+|++. +++ ++ +.|++||+.++.......... .
T Consensus 138 ~~~~~~~~~~~~~~~~~~s~dg~-l~~-~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (349)
T 1jmx_B 138 AKPVRTFPMPRQVYLMRAADDGS-LYV-AG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSML 213 (349)
T ss_dssp BCCSEEEECCSSCCCEEECTTSC-EEE-ES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEE
T ss_pred cceeeeccCCCcccceeECCCCc-EEE-cc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEee
Confidence 22 2334455688999999886 444 43 349999998763210000000 0
Q ss_pred ---------------------------------cEEEecCCCCeeEEEEcC-CCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010769 397 ---------------------------------SFTLHAHDKAVCTISYNP-LVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 397 ---------------------------------~~~~~~h~~~v~~l~~sp-~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
...+..+...+.+++|+| ++ ++|+++ ++.|.+||+.+++...
T Consensus 214 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~~~~- 289 (349)
T 1jmx_B 214 YTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRKLIK- 289 (349)
T ss_dssp EEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTEEEE-
T ss_pred eeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCeEEE-
Confidence 000001223566788899 88 777777 8899999999887432
Q ss_pred EEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.+.. ...+.+++|+|++++ |++++.++.|++||+.+++.+.++
T Consensus 290 -~~~~-~~~~~~~~~s~dg~~-l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 290 -AANL-DHTYYCVAFDKKGDK-LYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp -EEEC-SSCCCEEEECSSSSC-EEEESBSSEEEEEETTTTEEEEEE
T ss_pred -EEcC-CCCccceEECCCCCE-EEEecCCCeEEEEeccccceeeee
Confidence 3322 234678999999986 555777899999999998877654
No 150
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.85 E-value=7.9e-20 Score=203.02 Aligned_cols=286 Identities=10% Similarity=0.010 Sum_probs=202.8
Q ss_pred cccccccccc-CCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 139 SEDLEDMTIN-PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 139 ~~~v~~~~~~-p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
...+.++.|+ |+|+.|++++ .+ .||.++........+..|... .+.++. |+ +|+.|++++.
T Consensus 295 ~~~v~~~~~S~pdG~~la~~~-~~-----~i~~~~~~~~~~~~~~~~~~~----~~~~~~-------~s-dg~~l~~~s~ 356 (1045)
T 1k32_A 295 IPSKFAEDFSPLDGDLIAFVS-RG-----QAFIQDVSGTYVLKVPEPLRI----RYVRRG-------GD-TKVAFIHGTR 356 (1045)
T ss_dssp CGGGGEEEEEECGGGCEEEEE-TT-----EEEEECTTSSBEEECSCCSCE----EEEEEC-------SS-SEEEEEEEET
T ss_pred ccccceeeecCCCCCEEEEEE-cC-----EEEEEcCCCCceEEccCCCcc----eEEeee-------Ec-CCCeEEEEEC
Confidence 4478999999 9999999987 33 677776554311111111110 123334 48 8999999988
Q ss_pred CCcEE-EeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEEC
Q 010769 218 EPAIE-IWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDV 296 (502)
Q Consensus 218 dg~I~-iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~ 296 (502)
++.|. +|++..... ..+.+|...+.+++|+|+ +.+|++++.++.|++||+
T Consensus 357 ~~~l~~~~d~~~~~~----------------------------~~l~~~~~~~~~~~~SpD-G~~la~~~~~~~v~~~d~ 407 (1045)
T 1k32_A 357 EGDFLGIYDYRTGKA----------------------------EKFEENLGNVFAMGVDRN-GKFAVVANDRFEIMTVDL 407 (1045)
T ss_dssp TEEEEEEEETTTCCE----------------------------EECCCCCCSEEEEEECTT-SSEEEEEETTSEEEEEET
T ss_pred CCceEEEEECCCCCc----------------------------eEecCCccceeeeEECCC-CCEEEEECCCCeEEEEEC
Confidence 87888 888764210 112267788999999999 568999999999999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC----------CcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCC
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----------RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----------g~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~ 366 (502)
.+++....+..|...+.+++|+|+| ++|++++.+ +.|++||+.++. ......+...+.+++|+|++.
T Consensus 408 ~tg~~~~~~~~~~~~v~~~~~SpDG-~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~- 484 (1045)
T 1k32_A 408 ETGKPTVIERSREAMITDFTISDNS-RFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSK- 484 (1045)
T ss_dssp TTCCEEEEEECSSSCCCCEEECTTS-CEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSC-
T ss_pred CCCceEEeccCCCCCccceEECCCC-CeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCC-
Confidence 9999888777899999999999999 777776654 489999998765 333445566788899999987
Q ss_pred EEEEEeCCCeEEEEECCCCCCC---------------------------------CCCC-CCCccEEEecCCCCeeEEEE
Q 010769 367 SFVVSLEDGTIKGFDIRTAKSD---------------------------------PDST-SQQSSFTLHAHDKAVCTISY 412 (502)
Q Consensus 367 ~l~~~~~dg~i~i~d~~~~~~~---------------------------------~~~~-~~~~~~~~~~h~~~v~~l~~ 412 (502)
.++.++.++....|+....... .... ....+..+..|.+.+..+++
T Consensus 485 ~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~ 564 (1045)
T 1k32_A 485 NLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIP 564 (1045)
T ss_dssp EEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEE
T ss_pred EEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEE
Confidence 6777777776666765432110 0000 01123455567788999999
Q ss_pred cCCCCCEEEE-------------EeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 413 NPLVPNLLAT-------------GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 413 sp~~~~~l~t-------------~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
+|++ .++++ ......|.+||+.+++...+. ..+.+++|+|||++ |++++.+ .|++||+
T Consensus 565 s~dg-~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~------~~v~~~~~S~DG~~-l~~~~~~-~i~~~d~ 635 (1045)
T 1k32_A 565 LESS-ILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKVTEVK------NNLTDLRLSADRKT-VMVRKDD-GKIYTFP 635 (1045)
T ss_dssp CSSE-EEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCEEEEE------EEEEEEEECTTSCE-EEEEETT-SCEEEEE
T ss_pred cCCC-eEEEEecccCcccccccccCCCceEEEEECCCCcEEEee------cCcceEEECCCCCE-EEEEcCC-cEEEEeC
Confidence 9988 66664 123457889999888743322 55889999999996 6666655 8999999
Q ss_pred CCCc
Q 010769 480 LSDA 483 (502)
Q Consensus 480 ~~~~ 483 (502)
.+++
T Consensus 636 ~~~~ 639 (1045)
T 1k32_A 636 LEKP 639 (1045)
T ss_dssp SSCT
T ss_pred ccCc
Confidence 8876
No 151
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=2.2e-19 Score=191.91 Aligned_cols=306 Identities=13% Similarity=0.095 Sum_probs=185.7
Q ss_pred ccccccccCCCceEEEEEecCCcc----eeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVS----HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~----~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
.|.+++|+|+|++|++++.+.... .-.+|+|+...+....+.. .. .....+.++ +|||+|++||.++
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~-~~-~~~~~~~~~-------~~SPdG~~la~~~ 132 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDP-PE-VSNAKLQYA-------GWGPKGQQLIFIF 132 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCC-TT-CCSCCCSBC-------CBCSSTTCEEEEE
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccC-Cc-ccccccccc-------EECCCCCEEEEEE
Confidence 489999999999999997654221 1256666655441111111 00 001112333 4499999999998
Q ss_pred CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc---------cceeeEEecCCCCcEEEEEec
Q 010769 217 MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT---------DSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 217 ~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~---------~~V~~l~~~~~~~~~l~sgs~ 287 (502)
. +.|++|++..+.... +... ......+.++. ..+.+++|+|++ ..|++++.
T Consensus 133 ~-~~i~~~~~~~g~~~~---~~~~---------------~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~ 192 (723)
T 1xfd_A 133 E-NNIYYCAHVGKQAIR---VVST---------------GKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAI 192 (723)
T ss_dssp T-TEEEEESSSSSCCEE---EECC---------------CBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEE
T ss_pred C-CeEEEEECCCCceEE---EecC---------------CCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEE
Confidence 6 799999997643221 1000 00000001111 234789999995 57777765
Q ss_pred CC----------------------------------cEEEEECCCCeeeEEeccC------CCCeEEEEEcCCCCcEEEE
Q 010769 288 DK----------------------------------QVKIWDVAAGKCNLTLEHH------TDKVQAVAWNHHSPQILLS 327 (502)
Q Consensus 288 Dg----------------------------------~v~vwd~~~~~~~~~~~~h------~~~v~~l~~~~~~~~~l~s 327 (502)
++ +|++||+.++++...+..+ ...+.+++|+|+| ++|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~ 271 (723)
T 1xfd_A 193 NDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST-KVAVT 271 (723)
T ss_dssp ECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEE
T ss_pred CCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC-eEEEE
Confidence 43 7999999988866666544 5678999999999 67766
Q ss_pred EEC----CCcEEEEeCCCCCCccceEee-cCCe----EEEEeCCCCCCEEEE-EeCCC------eEEEEEC-CCCCCCCC
Q 010769 328 GSF----DRSVVMKDARISTHSGFKWAV-AADV----ESLAWDPHAEHSFVV-SLEDG------TIKGFDI-RTAKSDPD 390 (502)
Q Consensus 328 ~~~----dg~i~vwd~~~~~~~~~~~~~-~~~v----~~v~~~p~~~~~l~~-~~~dg------~i~i~d~-~~~~~~~~ 390 (502)
.+. +..|++||+.+++.......+ ...+ ..++|+|++..++++ +..++ .|.+||+ .....
T Consensus 272 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~--- 348 (723)
T 1xfd_A 272 WLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSN--- 348 (723)
T ss_dssp EEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSS---
T ss_pred EEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCc---
Confidence 543 357999999887755433222 3333 378999999876665 56677 5667773 33210
Q ss_pred CCCCCccEEEecCCCCeeE-EEEcCCCCCEEEEEeC-C--CcEEEEECCCCCeeEEEEecC---CCCCEEEEEEcCCCCc
Q 010769 391 STSQQSSFTLHAHDKAVCT-ISYNPLVPNLLATGST-D--KMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSPF 463 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~-l~~sp~~~~~l~t~s~-d--g~i~vwd~~~~~~~~~~~~~~---~~~~v~~~~~spd~~~ 463 (502)
.+...+..+...+.. ++|+|++ +.|+..+. + +.++||++..........+.. |...+..++|+|++++
T Consensus 349 ----~~~~~l~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~ 423 (723)
T 1xfd_A 349 ----DNIQSITSGDWDVTKILAYDEKG-NKIYFLSTEDLPRRRQLYSANTVGNFNRQCLSCDLVENCTYFSASFSHSMDF 423 (723)
T ss_dssp ----CCCCBSCCSSSCEEEEEEEETTT-TEEEEEESSSCTTCCEEEEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSSE
T ss_pred ----cceeEeecCCeEEEeeeEEcCCC-CEEEEEEcCCCCcceEEEEEeCCCCCCcceecccccCCCCeEEEEECCCCCE
Confidence 012333333344544 6999998 66655444 4 789999986532111222222 5567889999999997
Q ss_pred EEEEEeCCC--cEEEEECCCCcc
Q 010769 464 VLAIGGSKG--KLEIWDTLSDAG 484 (502)
Q Consensus 464 llasg~~dg--~i~vwd~~~~~~ 484 (502)
++++.+..+ ...+++..++..
T Consensus 424 l~~~~~~~~~p~~~~~~~~~~~~ 446 (723)
T 1xfd_A 424 FLLKCEGPGVPMVTVHNTTDKKK 446 (723)
T ss_dssp EEEECCSSSSCCEEEEETTTCCE
T ss_pred EEEEccCCCCCeEEEEECCCCCE
Confidence 665554443 334556544443
No 152
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.83 E-value=5.2e-19 Score=188.46 Aligned_cols=281 Identities=10% Similarity=0.088 Sum_probs=185.8
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCC--Cceeeeecccc------------CCCcceeeeecCCCCCC
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGD--PNLYVHHHIII------------PAFPLCMAWLDCPLKDR 206 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~--~~l~~~~~~~~------------~~~~~~~~w~~~~~~~s 206 (502)
.+..+.|. +..++.++.++ + +|+...+.. ..+..++.... ...+.+++| |
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~----i---~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~-------s 90 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDD----L---VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLD-------A 90 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTE----E---EEEC-------CEEEEHHHHHTTC-----------CCCEEEEE-------T
T ss_pred cCCCCcCc--CCeEEEEeCCc----E---EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEE-------C
Confidence 46778888 55666665442 4 444444333 34444443210 012345555 8
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|+ ++++.+. ++.|++||+.+... ..+..+...+.+++|+|++ ..|+++
T Consensus 91 pd-~~~~~~~-~~~i~~~d~~~~~~----------------------------~~l~~~~~~~~~~~~SpdG-~~la~~- 138 (706)
T 2z3z_A 91 GR-GLVVLFT-QGGLVGFDMLARKV----------------------------TYLFDTNEETASLDFSPVG-DRVAYV- 138 (706)
T ss_dssp TT-TEEEEEE-TTEEEEEETTTTEE----------------------------EEEECCTTCCTTCEECTTS-SEEEEE-
T ss_pred CC-CeEEEEE-CCEEEEEECCCCce----------------------------EEccCCcccccCCcCCCCC-CEEEEE-
Confidence 89 6655553 59999999975321 1122356678999999995 577774
Q ss_pred cCCcEEEEECCC-----CeeeEEeccCCCC--------------eEEEEEcCCCCcEEEEEE------------------
Q 010769 287 ADKQVKIWDVAA-----GKCNLTLEHHTDK--------------VQAVAWNHHSPQILLSGS------------------ 329 (502)
Q Consensus 287 ~Dg~v~vwd~~~-----~~~~~~~~~h~~~--------------v~~l~~~~~~~~~l~s~~------------------ 329 (502)
.++.|++|++.+ ++.......+... +.++.|+|+| ++|++++
T Consensus 139 ~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~ 217 (706)
T 2z3z_A 139 RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLE 217 (706)
T ss_dssp ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSS
T ss_pred ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCC
Confidence 679999999998 7766544433333 4899999999 7777776
Q ss_pred ---------------CCCcEEEEeCCCCCCccceE--eecCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEECCCCCC
Q 010769 330 ---------------FDRSVVMKDARISTHSGFKW--AVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRTAKS 387 (502)
Q Consensus 330 ---------------~dg~i~vwd~~~~~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~dg-----~i~i~d~~~~~~ 387 (502)
.+..|.+||+.++....... .+...+.+++|+|++. .+++++.++ .|++||+.++
T Consensus 218 ~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~~~~~~~~v~~~d~~~g-- 294 (706)
T 2z3z_A 218 AESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDEN-ILYVAEVNRAQNECKVNAYDAETG-- 294 (706)
T ss_dssp CEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSS-EEEEEEECTTSCEEEEEEEETTTC--
T ss_pred CceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCC-EEEEEEeCCCCCeeEEEEEECCCC--
Confidence 44679999998766433222 2345689999999987 566655554 8999999875
Q ss_pred CCCCCCCCccEEEe--cCCC---CeeEEEEcC--CCCCEEEEEeCCCcEEEEECC-CCCeeEEEEecCCCCCEEE-EEEc
Q 010769 388 DPDSTSQQSSFTLH--AHDK---AVCTISYNP--LVPNLLATGSTDKMVKLWDLS-NNQPSCIASRNPKAGAVFS-VAFS 458 (502)
Q Consensus 388 ~~~~~~~~~~~~~~--~h~~---~v~~l~~sp--~~~~~l~t~s~dg~i~vwd~~-~~~~~~~~~~~~~~~~v~~-~~~s 458 (502)
.....+. .+.. .+.+++|+| ++ ++|++++.++.++||.+. ++. .+..+..+...+.+ ++|+
T Consensus 295 -------~~~~~~~~~~~~~~~~~~~~~~~sp~~dg-~~l~~~~~~g~~~l~~~~~~~~--~~~~l~~~~~~v~~~~~~s 364 (706)
T 2z3z_A 295 -------RFVRTLFVETDKHYVEPLHPLTFLPGSNN-QFIWQSRRDGWNHLYLYDTTGR--LIRQVTKGEWEVTNFAGFD 364 (706)
T ss_dssp -------CEEEEEEEEECSSCCCCCSCCEECTTCSS-EEEEEECTTSSCEEEEEETTSC--EEEECCCSSSCEEEEEEEC
T ss_pred -------ceeeEEEEccCCCeECccCCceeecCCCC-EEEEEEccCCccEEEEEECCCC--EEEecCCCCeEEEeeeEEc
Confidence 1222222 2222 347789999 88 799999999999999876 333 35556667777876 7999
Q ss_pred CCCCcEEEEEeCCC----cEEEEECCCCc
Q 010769 459 EDSPFVLAIGGSKG----KLEIWDTLSDA 483 (502)
Q Consensus 459 pd~~~llasg~~dg----~i~vwd~~~~~ 483 (502)
|+++.++++++.++ .|..|++.++.
T Consensus 365 pdg~~l~~~~~~~~~~~~~l~~~d~~~~~ 393 (706)
T 2z3z_A 365 PKGTRLYFESTEASPLERHFYCIDIKGGK 393 (706)
T ss_dssp TTSSEEEEEESSSCTTCBEEEEEETTCCC
T ss_pred CCCCEEEEEecCCCCceEEEEEEEcCCCC
Confidence 99997666666665 67777777654
No 153
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=4.4e-19 Score=184.72 Aligned_cols=274 Identities=8% Similarity=0.009 Sum_probs=187.5
Q ss_pred ccccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 139 SEDLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
...|.+++|+|+|+.||.++. ++ .++||.++.... ..+..|+... ...+. |+|+ +++++++.
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g---~~~lw~~~~g~~--~~lt~~~~~~----~~~~~-------~spd-~~l~~~~~ 83 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEG---SVNAYLYDGGET--VKLNREPINS----VLDPH-------YGVG-RVILVRDV 83 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETT---EEEEEEEETTEE--EECCSSCCSE----ECEEC-------TTCS-EEEEEEEC
T ss_pred ccchheeecCCCCCeEEEEEccCC---ceeEEEEcCCCc--Eeeecccccc----ccccc-------CCCC-eEEEEecc
Confidence 446899999999999999887 44 678998754321 1122222111 12334 4888 77777765
Q ss_pred ---CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 218 ---EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 218 ---dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
+...+||.++..+.-. ...... ...+...+|+|++..++++.+.++.+.+|
T Consensus 84 ~~g~~~~~l~~~~~~~~g~----------------------~~~l~~----~~~~~~~~~s~dg~~~~~~s~~~~~~~l~ 137 (582)
T 3o4h_A 84 SKGAEQHALFKVNTSRPGE----------------------EQRLEA----VKPMRILSGVDTGEAVVFTGATEDRVALY 137 (582)
T ss_dssp STTSCCEEEEEEETTSTTC----------------------CEECTT----SCSBEEEEEEECSSCEEEEEECSSCEEEE
T ss_pred CCCCcceEEEEEeccCCCc----------------------cccccC----CCCceeeeeCCCCCeEEEEecCCCCceEE
Confidence 4566777664310000 000011 11233567888865555555555556699
Q ss_pred ECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC----CcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEE
Q 010769 295 DVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 295 d~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~ 370 (502)
|+.++++......+. .+++|+|+| ++|++++.+ +.|++||+.++.... ...+...+..++|+|+|. .+++
T Consensus 138 d~~~g~~~~l~~~~~---~~~~~spDG-~~la~~~~~~~~~~~i~~~d~~~g~~~~-l~~~~~~~~~~~~SpDG~-~l~~ 211 (582)
T 3o4h_A 138 ALDGGGLRELARLPG---FGFVSDIRG-DLIAGLGFFGGGRVSLFTSNLSSGGLRV-FDSGEGSFSSASISPGMK-VTAG 211 (582)
T ss_dssp EEETTEEEEEEEESS---CEEEEEEET-TEEEEEEEEETTEEEEEEEETTTCCCEE-ECCSSCEEEEEEECTTSC-EEEE
T ss_pred EccCCcEEEeecCCC---ceEEECCCC-CEEEEEEEcCCCCeEEEEEcCCCCCceE-eecCCCccccceECCCCC-EEEE
Confidence 999987765554333 789999999 888877766 789999998877543 445667789999999987 5667
Q ss_pred EeCCC--eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEE--------EcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 371 SLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS--------YNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 371 ~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~--------~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
+..+| .|++||+.++ ... .+..|...+..++ |+|+| .++++++.++.+++|++ ++.
T Consensus 212 ~~~~~~~~i~~~d~~~~---------~~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~- 277 (582)
T 3o4h_A 212 LETAREARLVTVDPRDG---------SVE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GER- 277 (582)
T ss_dssp EECSSCEEEEEECTTTC---------CEE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEE-
T ss_pred ccCCCeeEEEEEcCCCC---------cEE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCe-
Confidence 78888 8999999876 333 5667777777777 99999 99999999999999999 542
Q ss_pred EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC---cEEEEECCC
Q 010769 441 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG---KLEIWDTLS 481 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~spd~~~llasg~~dg---~i~vwd~~~ 481 (502)
.. ...+.+.+++|+ ++. ++++++.+. .+.+|+..+
T Consensus 278 -~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 278 -VE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp -EC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred -ec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 21 334678999999 887 466666664 466676653
No 154
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.83 E-value=1.6e-17 Score=161.06 Aligned_cols=267 Identities=9% Similarity=0.136 Sum_probs=167.5
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec-CC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-ME 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~-~d 218 (502)
.....++|+|+++ |++++..+....+.+|..+.... .... ........|..++| +|+|++|++++ .+
T Consensus 40 ~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~---~~~~-~~~~~~~~p~~~a~-------spdg~~l~~~~~~~ 107 (347)
T 3hfq_A 40 QNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTA---HKLN-TVVAPGTPPAYVAV-------DEARQLVYSANYHK 107 (347)
T ss_dssp SCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEE---EEEE-EEEEESCCCSEEEE-------ETTTTEEEEEETTT
T ss_pred CCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcE---EEee-eeecCCCCCEEEEE-------CCCCCEEEEEeCCC
Confidence 4567899999999 55555432223455555533221 1111 11112344566666 79999888887 67
Q ss_pred CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC-
Q 010769 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA- 297 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~- 297 (502)
+.|.+|++...........+.. .. .... ...+...+.+++|+|++. +++++..++.|.+|++.
T Consensus 108 ~~v~v~~~~~~g~~~~~~~~~~-----------~~--~~p~--~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 108 GTAEVMKIAADGALTLTDTVQH-----------SG--HGPR--PEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp TEEEEEEECTTSCEEEEEEEEC-----------CC--CCSS--TTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECT
T ss_pred CEEEEEEeCCCCCeeecceeec-----------CC--CCCC--ccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECC
Confidence 9999999964222211111100 00 0000 112345688999999966 78777788999999998
Q ss_pred CCeee--EEecc-CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC--CCCccce--Eeec------CCeEEEEeCCCC
Q 010769 298 AGKCN--LTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI--STHSGFK--WAVA------ADVESLAWDPHA 364 (502)
Q Consensus 298 ~~~~~--~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~--~~~~~~~--~~~~------~~v~~v~~~p~~ 364 (502)
+++.. ..+.. ....+..++|+|++..+++++..++.|.+|++.. +...... .... ..+..++|+|++
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG 251 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDG 251 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTS
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCC
Confidence 55432 22222 2346788999999943555567789999999875 2211111 1111 347889999998
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC-CCcEEEE--ECCCCCeeE
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLW--DLSNNQPSC 441 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~-dg~i~vw--d~~~~~~~~ 441 (502)
..+++++..++.|.+|++..... ...+..+..+...+.+++|+|++ ++|++++. ++.|.+| |..+++...
T Consensus 252 ~~l~v~~~~~~~v~v~~~~~~g~------~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~d~~tg~l~~ 324 (347)
T 3hfq_A 252 HFLYVSNRGYNTLAVFAVTADGH------LTLIQQISTEGDFPRDFDLDPTE-AFVVVVNQNTDNATLYARDLTSGKLSL 324 (347)
T ss_dssp CEEEEEEETTTEEEEEEECGGGC------EEEEEEEECSSSCCCEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEE
T ss_pred CEEEEEeCCCCEEEEEEECCCCc------EEEeEEEecCCCCcCeEEECCCC-CEEEEEEcCCCcEEEEEEeCCCCeEEe
Confidence 75556777799999999973210 24455666667778999999998 66666665 5899999 555666433
No 155
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.81 E-value=8.1e-18 Score=164.48 Aligned_cols=282 Identities=11% Similarity=0.079 Sum_probs=173.5
Q ss_pred eEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccC--CCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCC-CC
Q 010769 153 VIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIP--AFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD-VI 229 (502)
Q Consensus 153 ~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~-~~ 229 (502)
.|++|+.... ..+.+|.++...+ .+......... ..|..++| +|+|++|++++.+ .|.+|++. .+
T Consensus 4 ~~~vg~~~~~-~~i~~~~~d~~~g---~l~~~~~~~~~~~~~~~~~a~-------spdg~~l~~~~~~-~v~~~~~~~~g 71 (365)
T 1jof_A 4 HLMIGTWTPP-GAIFTVQFDDEKL---TCKLIKRTEIPQDEPISWMTF-------DHERKNIYGAAMK-KWSSFAVKSPT 71 (365)
T ss_dssp EEEEEESSSS-CEEEEEEEETTTT---EEEEEEEEECCTTCCCSEEEE-------CTTSSEEEEEEBT-EEEEEEEEETT
T ss_pred EEEEEEccCC-CcEEEEEEECCCC---CEEEeeEEccCCCCCCcEEEE-------CCCCCEEEEEccc-eEEEEEECCCC
Confidence 3455554321 2355555655444 44322222112 23455555 8999999998887 99999985 32
Q ss_pred CCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCc-EEEEEe-------------cCCcEEEEE
Q 010769 230 DEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN-ILASAS-------------ADKQVKIWD 295 (502)
Q Consensus 230 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~-~l~sgs-------------~Dg~v~vwd 295 (502)
.... ......+ +.+.+++|+|+++. ++++++ .+|++.+|+
T Consensus 72 ~~~~-------------------------~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~ 125 (365)
T 1jof_A 72 EIVH-------------------------EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFS 125 (365)
T ss_dssp EEEE-------------------------EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEE
T ss_pred CEEE-------------------------eeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEc
Confidence 1100 0000011 23567899999543 345553 689999999
Q ss_pred CC-CCeeeEEec----cCCCCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCC-CCCCccc-eEe---ecCCeEEEEeCCCC
Q 010769 296 VA-AGKCNLTLE----HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDAR-ISTHSGF-KWA---VAADVESLAWDPHA 364 (502)
Q Consensus 296 ~~-~~~~~~~~~----~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~-~~~~~~~-~~~---~~~~v~~v~~~p~~ 364 (502)
+. .++....+. .+...+.+++|+|+| ++|+++. .++.|.+|++. +++.... ... +...+..++|+|++
T Consensus 126 ~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg 204 (365)
T 1jof_A 126 VSETGKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG 204 (365)
T ss_dssp ECTTCCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS
T ss_pred cCCCCcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC
Confidence 97 465544443 255789999999999 6666655 46899999998 5543221 112 24568999999998
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCcc---EEEe-------cCCC------CeeEEE-EcCCCCCEEEEEeCC-
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS---FTLH-------AHDK------AVCTIS-YNPLVPNLLATGSTD- 426 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~---~~~~-------~h~~------~v~~l~-~sp~~~~~l~t~s~d- 426 (502)
..+++++..++.|.+|++.... .... ..+. +|.. .+..++ |+|+| ++|++++..
T Consensus 205 ~~l~v~~~~~~~v~v~~~~~~~-------g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG-~~l~v~~~~~ 276 (365)
T 1jof_A 205 NYLYALMEAGNRICEYVIDPAT-------HMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSG-KYMFASSRAN 276 (365)
T ss_dssp SEEEEEETTTTEEEEEEECTTT-------CCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTS-SEEEEEEEES
T ss_pred CEEEEEECCCCeEEEEEEeCCC-------CcEEEccceEEcCCCCcCCcccccccccccccEEEECCCC-CEEEEECCCC
Confidence 7444444457899999875321 0211 1121 1222 478999 99998 666665542
Q ss_pred C-----cEEEEECC-CCCeeEEEE-ecCCCCCEEEEEEcC---CCCcEEEEEeC-CCcEEEEECCCC
Q 010769 427 K-----MVKLWDLS-NNQPSCIAS-RNPKAGAVFSVAFSE---DSPFVLAIGGS-KGKLEIWDTLSD 482 (502)
Q Consensus 427 g-----~i~vwd~~-~~~~~~~~~-~~~~~~~v~~~~~sp---d~~~llasg~~-dg~i~vwd~~~~ 482 (502)
+ .|.+|++. +++...+.. ...+...+..++|+| +|++ |++++. ++.|+||++...
T Consensus 277 ~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~-l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 277 KFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEW-MAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp STTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTE-EEEECSSSCEEEEEEEETT
T ss_pred CCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCE-EEEEEcCCCeEEEEEEchh
Confidence 2 89999996 555332222 333334466789999 8996 555555 589999999766
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.80 E-value=3.1e-18 Score=164.72 Aligned_cols=234 Identities=11% Similarity=0.050 Sum_probs=166.4
Q ss_pred CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccc-ceeeEEecCCCCcEEEEEecC
Q 010769 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~D 288 (502)
++|++++.++.|++||+.+....... ..++.. .+.+++|+|++..++++++.+
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~--------------------------~~~~~~~~~~~~~~s~dg~~l~v~~~~~ 55 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVI--------------------------TIADAGPTPMVPMVAPGGRIAYATVNKS 55 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEE--------------------------ECTTCTTCCCCEEECTTSSEEEEEETTT
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEE--------------------------EcCCCCCCccceEEcCCCCEEEEEeCCC
Confidence 57899999999999999753322110 012222 478899999966666777788
Q ss_pred CcEEEEECCCCeeeEEecc-C----CCCeEEEEEcCCCCcEEEEEE------------CCCcEEEEeCCCCCCccceEee
Q 010769 289 KQVKIWDVAAGKCNLTLEH-H----TDKVQAVAWNHHSPQILLSGS------------FDRSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~-h----~~~v~~l~~~~~~~~~l~s~~------------~dg~i~vwd~~~~~~~~~~~~~ 351 (502)
+.|.+||+.+++.+..+.. + ...+.+++|+|++ ++|++++ .++.|.+||+.+.+... ....
T Consensus 56 ~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~-~~~~ 133 (337)
T 1pby_B 56 ESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRK-AFEA 133 (337)
T ss_dssp TEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEE-EEEC
T ss_pred CeEEEEECCCCCeEeeEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCcEEE-EEeC
Confidence 9999999999988877653 2 1267789999999 6677765 57999999998765443 3344
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC----
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---- 427 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---- 427 (502)
...+.+++|+|++.. ++++ ++.|++||+.++ .....+..+.. ...+.|+|++..+++++..++
T Consensus 134 ~~~~~~~~~s~dg~~-l~~~--~~~i~~~d~~~~---------~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~~~~ 200 (337)
T 1pby_B 134 PRQITMLAWARDGSK-LYGL--GRDLHVMDPEAG---------TLVEDKPIQSW-EAETYAQPDVLAVWNQHESSGVMAT 200 (337)
T ss_dssp CSSCCCEEECTTSSC-EEEE--SSSEEEEETTTT---------EEEEEECSTTT-TTTTBCCCBCCCCCCCCTTTTEEEE
T ss_pred CCCcceeEECCCCCE-EEEe--CCeEEEEECCCC---------cEeeeeecccc-CCCceeCCCccEEeeeccCCCceee
Confidence 567888999998874 5555 689999999876 44444543331 113378888743433333333
Q ss_pred -------------------cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 428 -------------------MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 -------------------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.+||+.+++.. ......+...+.+++|+|++++ |+++ ++.|++||+.+++.+...
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~~~~~~~~~~~~~~~~s~dg~~-l~~~--~~~v~~~d~~~~~~~~~~ 276 (337)
T 1pby_B 201 PFYTARKDIDPADPTAYRTGLLTMDLETGEMA-MREVRIMDVFYFSTAVNPAKTR-AFGA--YNVLESFDLEKNASIKRV 276 (337)
T ss_dssp EEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-EEEEEECSSCEEEEEECTTSSE-EEEE--ESEEEEEETTTTEEEEEE
T ss_pred eeeccccccccccccccccceEEEeCCCCCce-EeecCCCCCceeeEEECCCCCE-EEEe--CCeEEEEECCCCcCccee
Confidence 4689999998854 4455556677899999999996 5555 689999999988776543
No 157
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.80 E-value=8.6e-18 Score=165.39 Aligned_cols=287 Identities=10% Similarity=0.031 Sum_probs=178.3
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcE
Q 010769 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAI 221 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I 221 (502)
+...+|+|+|+.|+.++..+. ...||+++........+..++... .....| +|+|++|+.++.++.|
T Consensus 38 ~~~~~~SpDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~~~~~----~~~~~~-------spdg~~l~~~~~~~~l 104 (388)
T 3pe7_A 38 FYQKCFTRDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEGRGDN----TFGGFL-------SPDDDALFYVKDGRNL 104 (388)
T ss_dssp TTSCCBCTTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCSSCBC----SSSCEE-------CTTSSEEEEEETTTEE
T ss_pred hcCccCCCCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeCCCCC----ccceEE-------cCCCCEEEEEeCCCeE
Confidence 344899999999999987332 447888886654211122122111 113344 8999999999999999
Q ss_pred EEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEE--ecCCCCcEEEEE--------------
Q 010769 222 EIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLA--WNKEFRNILASA-------------- 285 (502)
Q Consensus 222 ~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~--~~~~~~~~l~sg-------------- 285 (502)
++||+.++.... ....+...+.... ++|++ .+++..
T Consensus 105 ~~~d~~~g~~~~---------------------------~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~ 156 (388)
T 3pe7_A 105 MRVDLATLEENV---------------------------VYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWK 156 (388)
T ss_dssp EEEETTTCCEEE---------------------------EEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHH
T ss_pred EEEECCCCccee---------------------------eeechhhcccccceeECCCC-CeeccccccCcccccccccc
Confidence 999997643211 1112333343333 47884 455532
Q ss_pred --------ecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcC-CCCcEEEEEECC------CcEEEEeCCCCCCccceEe
Q 010769 286 --------SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 286 --------s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~ 350 (502)
..+..|.+||+.+++... +..+...+..+.|+| ++ ..|+.+... ..|.++++...........
T Consensus 157 ~~~~~~~~~~~~~l~~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~ 234 (388)
T 3pe7_A 157 KFHEFYFTKPCCRLMRVDLKTGESTV-ILQENQWLGHPIYRPYDD-STVAFCHEGPHDLVDARMWLINEDGTNMRKVKTH 234 (388)
T ss_dssp HHHHHGGGCCCEEEEEEETTTCCEEE-EEEESSCEEEEEEETTEE-EEEEEEECSCTTTSSCSEEEEETTSCCCEESCCC
T ss_pred hhhhhhccCCcceEEEEECCCCceEE-eecCCccccccEECCCCC-CEEEEEEecCCCCCcceEEEEeCCCCceEEeeeC
Confidence 234689999999886544 444667899999999 88 666666553 3788888766544332221
Q ss_pred ec-CCeEEEEeCCCCCCEEEEEeCCC----eEEEEECCCCCCCCCCCCCCccEEEecCCC---CeeEEEEcCCCCCEEEE
Q 010769 351 VA-ADVESLAWDPHAEHSFVVSLEDG----TIKGFDIRTAKSDPDSTSQQSSFTLHAHDK---AVCTISYNPLVPNLLAT 422 (502)
Q Consensus 351 ~~-~~v~~v~~~p~~~~~l~~~~~dg----~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~l~t 422 (502)
.. ..+..++|+|++..+++++..++ .|++||+.++.. ..+..+..+.. ....++|+|+|..++++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~-------~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~ 307 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLEN-------RQLTSMPACSHLMSNYDGSLMVGDGSDAPVD 307 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCE-------EEEEEECCEEEEEECTTSSEEEEEECCC---
T ss_pred CCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCce-------EEEEcCCCceeeeecCCCCeEccCCCcceeE
Confidence 11 24778899999886656555433 399999987621 22223322110 12234789998444433
Q ss_pred E--------eCCCcEEEEECCCCCeeEEEEecCCCC-----------CEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 423 G--------STDKMVKLWDLSNNQPSCIASRNPKAG-----------AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 423 ~--------s~dg~i~vwd~~~~~~~~~~~~~~~~~-----------~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
. ..+..|++||+.+++...+.. +.. .+.+++|+|||++++.++..+|...||.+.-
T Consensus 308 ~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~---~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 308 VQDDSGYKIENDPFLYVFNMKNGTQHRVAR---HDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp ---------CCCCEEEEEETTTTEEEEEEE---CCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred eeeccccccCCCCEEEEEeccCCceEEecc---ccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 2 456789999999876433332 333 4778899999997666666778777776644
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=7.5e-17 Score=157.21 Aligned_cols=287 Identities=8% Similarity=0.081 Sum_probs=173.4
Q ss_pred CccccccccccCCCceEEEEEecC-CcceeEEEEEecCCCCCCceeeeeccc-cCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 138 DSEDLEDMTINPNDAVIVCARNED-DVSHLEVYILEESDGGDPNLYVHHHII-IPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~-~~~~l~v~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
+......++|+|++++|++++.++ ....+.+|.++...+ .+....... ....|..+.+ ++++|+++
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~~~~p~~~~~---------dg~~l~~~ 115 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTMGADPCYLTT---------NGKNIVTA 115 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECSSSCEEEEEE---------CSSEEEEE
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccCCCCcEEEEE---------CCCEEEEE
Confidence 345677899999999999988752 124678888886543 332222111 1223333332 67777666
Q ss_pred c-CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 216 S-MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 216 ~-~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
+ .++.|.+|++.....+......-. .. .........+...+.+++|+|++..+++++..++.|.+|
T Consensus 116 ~~~~~~v~~~~~~~~g~~~~~~~~~~----------~~---g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~ 182 (361)
T 3scy_A 116 NYSGGSITVFPIGQDGALLPASDVIE----------FK---GSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKF 182 (361)
T ss_dssp ETTTTEEEEEEBCTTSCBCSCSEEEE----------CC---CCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred ECCCCEEEEEEeCCCCcCcccceeEE----------cc---CCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEE
Confidence 5 578999999975333221110000 00 000000112344578999999965455666668999999
Q ss_pred ECCCCe-------e------eEEeccCCCCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCCCCCCccceE-----eecCCe
Q 010769 295 DVAAGK-------C------NLTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKW-----AVAADV 355 (502)
Q Consensus 295 d~~~~~-------~------~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~-----~~~~~v 355 (502)
++.... . ......+...+..++|+|++ +++++++ .++.|.+|++.++....... .+....
T Consensus 183 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg-~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~ 261 (361)
T 3scy_A 183 NINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDG-KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGS 261 (361)
T ss_dssp EECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCE
T ss_pred EEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCC-CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCc
Confidence 887543 1 11122345668899999999 6665555 68999999998654321111 112346
Q ss_pred EEEEeCCCCCCEEEEEeC-CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEE
Q 010769 356 ESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS-TDKMVKLWD 433 (502)
Q Consensus 356 ~~v~~~p~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd 433 (502)
..++|+|++..++++... ++.|.+|++...... ...+..+.. ...+.+++|+|++ ++|++++ .++.|.+|.
T Consensus 262 ~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~-----~~~~~~~~~-g~~~~~~~~spdg-~~l~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 262 GDIHLSPDGKYLYASNRLKADGVAIFKVDETNGT-----LTKVGYQLT-GIHPRNFIITPNG-KYLLVACRDTNVIQIFE 334 (361)
T ss_dssp EEEEECTTSSEEEEEECSSSCEEEEEEECTTTCC-----EEEEEEEEC-SSCCCEEEECTTS-CEEEEEETTTTEEEEEE
T ss_pred ccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCc-----EEEeeEecC-CCCCceEEECCCC-CEEEEEECCCCCEEEEE
Confidence 799999998744444445 589999999632100 123444444 5678899999998 6666666 678999965
Q ss_pred C--CCCCeeEEEEecCCCCCEEEEEEc
Q 010769 434 L--SNNQPSCIASRNPKAGAVFSVAFS 458 (502)
Q Consensus 434 ~--~~~~~~~~~~~~~~~~~v~~~~~s 458 (502)
+ .+++...+ ....+...+.|+.|.
T Consensus 335 ~d~~~g~~~~~-~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 335 RDQATGLLTDI-KKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTTCCEEEC-SCCEECSSEEEEEEE
T ss_pred EECCCCcEeec-ceeeeCCCCeEEEEc
Confidence 4 45653211 112244568888885
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.80 E-value=6.6e-19 Score=183.35 Aligned_cols=227 Identities=11% Similarity=0.090 Sum_probs=164.8
Q ss_pred CCCCCEEEEecC-CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc-cceeeEEecCCCCcEEE
Q 010769 206 REKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILA 283 (502)
Q Consensus 206 s~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~~~~~~~~l~ 283 (502)
+|||++||+++. +|.++||+++.+.. ..+..|. ..|.+++|+|+ .+++
T Consensus 30 ~~DG~~la~~s~~~g~~~lw~~~~g~~----------------------------~~lt~~~~~~~~~~~~spd--~~l~ 79 (582)
T 3o4h_A 30 VVDGDKLLVVGFSEGSVNAYLYDGGET----------------------------VKLNREPINSVLDPHYGVG--RVIL 79 (582)
T ss_dssp EETTTEEEEEEEETTEEEEEEEETTEE----------------------------EECCSSCCSEECEECTTCS--EEEE
T ss_pred CCCCCeEEEEEccCCceeEEEEcCCCc----------------------------EeeecccccccccccCCCC--eEEE
Confidence 799999999887 99999999743211 1122344 68999999998 4777
Q ss_pred EEec---CCcEEEEECCC---CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEE
Q 010769 284 SASA---DKQVKIWDVAA---GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVES 357 (502)
Q Consensus 284 sgs~---Dg~v~vwd~~~---~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~ 357 (502)
+++. +...+||.+.. +... .+..+ ..+...+|+|++..++++++.++.+.+||+.++.... ...+.. .+
T Consensus 80 ~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~-~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~-l~~~~~--~~ 154 (582)
T 3o4h_A 80 VRDVSKGAEQHALFKVNTSRPGEEQ-RLEAV-KPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRE-LARLPG--FG 154 (582)
T ss_dssp EEECSTTSCCEEEEEEETTSTTCCE-ECTTS-CSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEE-EEEESS--CE
T ss_pred EeccCCCCcceEEEEEeccCCCccc-cccCC-CCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEE-eecCCC--ce
Confidence 7775 45556655433 2222 34322 2344678888886666666666667799998776443 223333 88
Q ss_pred EEeCCCCCCEEEEEeCC----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC--cEEE
Q 010769 358 LAWDPHAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK--MVKL 431 (502)
Q Consensus 358 v~~~p~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg--~i~v 431 (502)
++|+|+|. .++.++.+ +.|++||+.++ . ...+..|...+..++|+|+| +.|+++..++ .|++
T Consensus 155 ~~~spDG~-~la~~~~~~~~~~~i~~~d~~~g---------~-~~~l~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~i~~ 222 (582)
T 3o4h_A 155 FVSDIRGD-LIAGLGFFGGGRVSLFTSNLSSG---------G-LRVFDSGEGSFSSASISPGM-KVTAGLETAREARLVT 222 (582)
T ss_dssp EEEEEETT-EEEEEEEEETTEEEEEEEETTTC---------C-CEEECCSSCEEEEEEECTTS-CEEEEEECSSCEEEEE
T ss_pred EEECCCCC-EEEEEEEcCCCCeEEEEEcCCCC---------C-ceEeecCCCccccceECCCC-CEEEEccCCCeeEEEE
Confidence 99999987 56655555 67999999875 2 34677888899999999999 8888888888 8999
Q ss_pred EECCCCCeeEEEEecCCCCCEEEEE--------EcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010769 432 WDLSNNQPSCIASRNPKAGAVFSVA--------FSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~--------~spd~~~llasg~~dg~i~vwd~~~~~~~ 485 (502)
||+.+++.. ....|...+..++ |+||| .++++++.+|.+++|++ ++.+
T Consensus 223 ~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~~~ 278 (582)
T 3o4h_A 223 VDPRDGSVE---DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GERV 278 (582)
T ss_dssp ECTTTCCEE---ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TEEE
T ss_pred EcCCCCcEE---EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CCee
Confidence 999988743 4556666666666 99999 58999999999999999 5443
No 160
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=7.7e-18 Score=179.81 Aligned_cols=299 Identities=12% Similarity=0.094 Sum_probs=189.4
Q ss_pred cccccccCCCceEEEEEecCCc----ceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 142 LEDMTINPNDAVIVCARNEDDV----SHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~----~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
+.+++|+|+|++|+.++..... ..-.||+|+...+ .... ...+.....++.| ||+|++||.+.
T Consensus 62 ~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g---~~~~--~~~l~~~~~~~~~-------SPDG~~la~~~- 128 (719)
T 1z68_A 62 ASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNG---EFVR--GNELPRPIQYLCW-------SPVGSKLAYVY- 128 (719)
T ss_dssp CSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT---EECC--SSCCCSSBCCEEE-------CSSTTCEEEEE-
T ss_pred eeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCC---cccc--ceecCcccccceE-------CCCCCEEEEEE-
Confidence 8899999999999998762100 0126777765544 2200 0111222344555 89999999986
Q ss_pred CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccce---------eeEEecCCCCcEEEEEecC
Q 010769 218 EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV---------LGLAWNKEFRNILASASAD 288 (502)
Q Consensus 218 dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V---------~~l~~~~~~~~~l~sgs~D 288 (502)
++.|++|++.++....- ... ......+.+|...| .+++|+|++ ..|++++.|
T Consensus 129 ~~~i~~~~~~~g~~~~l--~~~----------------~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d 189 (719)
T 1z68_A 129 QNNIYLKQRPGDPPFQI--TFN----------------GRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFN 189 (719)
T ss_dssp TTEEEEESSTTSCCEEC--CCC----------------CBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEE
T ss_pred CCeEEEEeCCCCCcEEE--ecC----------------CCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEEC
Confidence 78999999976543210 000 00001122343333 589999994 578887765
Q ss_pred C----------------------------------cEEEEECCCCeee--------EEeccCCCCeEEEEEcCCCCcEEE
Q 010769 289 K----------------------------------QVKIWDVAAGKCN--------LTLEHHTDKVQAVAWNHHSPQILL 326 (502)
Q Consensus 289 g----------------------------------~v~vwd~~~~~~~--------~~~~~h~~~v~~l~~~~~~~~~l~ 326 (502)
. .|++||+.+++.. ..+.+|...+.+++|+|++ ++++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~ 268 (719)
T 1z68_A 190 DTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCL 268 (719)
T ss_dssp CTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEE
T ss_pred CCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEE
Confidence 2 7899999988753 1234588889999999997 7777
Q ss_pred EEECCC----cEEEEe----CCCCCCccce----EeecCCeE-----EEEeCCCCCCEEE-EEeCCC--eEEEEECCCCC
Q 010769 327 SGSFDR----SVVMKD----ARISTHSGFK----WAVAADVE-----SLAWDPHAEHSFV-VSLEDG--TIKGFDIRTAK 386 (502)
Q Consensus 327 s~~~dg----~i~vwd----~~~~~~~~~~----~~~~~~v~-----~v~~~p~~~~~l~-~~~~dg--~i~i~d~~~~~ 386 (502)
+....+ .|.+|| +.+++..... ..+...+. .+.|+|++..+++ ++..+| .|.+|++...
T Consensus 269 ~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~- 347 (719)
T 1z68_A 269 QWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVE- 347 (719)
T ss_dssp EEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCST-
T ss_pred EEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCC-
Confidence 654332 488899 7766655444 34555565 7899999886555 344556 4666676544
Q ss_pred CCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC----CCcEEEEECCC--CCeeEEEEec----CCCCCEEEEE
Q 010769 387 SDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSN--NQPSCIASRN----PKAGAVFSVA 456 (502)
Q Consensus 387 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~----dg~i~vwd~~~--~~~~~~~~~~----~~~~~v~~~~ 456 (502)
. ...+..+...+..+.++ ++..+++++.. ++.+++|.+.. +.. ....+. ++...+..+.
T Consensus 348 --------~-~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g~~-~~~~l~~~~~~~~~~~~~~~ 416 (719)
T 1z68_A 348 --------N-AIQITSGKWEAINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSYPP-SKKCVTCHLRKERCQYYTAS 416 (719)
T ss_dssp --------T-CEECSCSSSCEEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSSSC-CEEESSTTTTTTTBCBEEEE
T ss_pred --------c-eEecccCceEEEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCCCC-CceeccCccCCCCCceEEEE
Confidence 2 34555566667777777 66344445444 47888988754 321 012222 2556788999
Q ss_pred EcCCCCcEEEEEeCC--CcEEEEECCCCccc
Q 010769 457 FSEDSPFVLAIGGSK--GKLEIWDTLSDAGI 485 (502)
Q Consensus 457 ~spd~~~llasg~~d--g~i~vwd~~~~~~~ 485 (502)
|+|++++++++++.. ..+.+|++.+++.+
T Consensus 417 ~s~dg~~l~~~~s~~~~p~~~l~d~~~g~~~ 447 (719)
T 1z68_A 417 FSDYAKYYALVCYGPGIPISTLHDGRTDQEI 447 (719)
T ss_dssp ECGGGSSEEEEECCBSSCEEEEECSSSCCEE
T ss_pred ECCCCCEEEEEcCCCCCCeEEEEECCCCCEE
Confidence 999999766665544 46889999888754
No 161
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.79 E-value=1.7e-18 Score=184.87 Aligned_cols=282 Identities=9% Similarity=0.058 Sum_probs=179.6
Q ss_pred ccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC-----
Q 010769 143 EDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM----- 217 (502)
Q Consensus 143 ~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~----- 217 (502)
.+++|+|++++++++ .++ .||+|+...+....+..++... .....++.| ||+|++||+++.
T Consensus 19 ~~~~~s~dg~~~~~~-~d~-----~i~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~-------SpDg~~la~~~~~~~~~ 84 (719)
T 1z68_A 19 FFPNWISGQEYLHQS-ADN-----NIVLYNIETGQSYTILSNRTMK-SVNASNYGL-------SPDRQFVYLESDYSKLW 84 (719)
T ss_dssp CCCEESSSSEEEEEC-TTS-----CEEEEESSSCCEEEEECHHHHH-TTTCSEEEE-------CTTSSEEEEEEEEEECS
T ss_pred CccEECCCCeEEEEc-CCC-----CEEEEEcCCCcEEEEEcccccc-ccceeeEEE-------CCCCCeEEEEecCceeE
Confidence 368999999766554 344 5556665544222333333221 001245555 899999999876
Q ss_pred ----CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEE
Q 010769 218 ----EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKI 293 (502)
Q Consensus 218 ----dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~v 293 (502)
++.|++||+.++....+ . . ....+.+++|+|+| +.||+++ ++.|++
T Consensus 85 ~~s~~~~i~~~d~~~g~~~~~---------------------~----~---l~~~~~~~~~SPDG-~~la~~~-~~~i~~ 134 (719)
T 1z68_A 85 RYSYTATYYIYDLSNGEFVRG---------------------N----E---LPRPIQYLCWSPVG-SKLAYVY-QNNIYL 134 (719)
T ss_dssp SSCEEEEEEEEETTTTEECCS---------------------S----C---CCSSBCCEEECSST-TCEEEEE-TTEEEE
T ss_pred EeecceEEEEEECCCCccccc---------------------e----e---cCcccccceECCCC-CEEEEEE-CCeEEE
Confidence 68999999976432110 0 0 12458899999995 4777765 789999
Q ss_pred EECCCCeeeEEe-ccCCCCe-----------------EEEEEcCCCCcEEEEEECCC-----------------------
Q 010769 294 WDVAAGKCNLTL-EHHTDKV-----------------QAVAWNHHSPQILLSGSFDR----------------------- 332 (502)
Q Consensus 294 wd~~~~~~~~~~-~~h~~~v-----------------~~l~~~~~~~~~l~s~~~dg----------------------- 332 (502)
|++.+++..... .++...| .+++|+|+| +.|++++.|.
T Consensus 135 ~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 213 (719)
T 1z68_A 135 KQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNG-KFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIP 213 (719)
T ss_dssp ESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTS-SEEEEEEEECTTSCEEEEEECCSSSSCEEEEEE
T ss_pred EeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCccceeec
Confidence 999988765433 2333322 489999999 7788777542
Q ss_pred -----------cEEEEeCCCCCCc---cc-----eEeecCCeEEEEeCCCCCCEEEEEeCC----CeEEEEE----CCCC
Q 010769 333 -----------SVVMKDARISTHS---GF-----KWAVAADVESLAWDPHAEHSFVVSLED----GTIKGFD----IRTA 385 (502)
Q Consensus 333 -----------~i~vwd~~~~~~~---~~-----~~~~~~~v~~v~~~p~~~~~l~~~~~d----g~i~i~d----~~~~ 385 (502)
.|++||+.++... .. ...+...+.+++|+|++ .++++.... ..|.+|| +.++
T Consensus 214 yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d~~~~~~~g 292 (719)
T 1z68_A 214 YPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICDFREDWQTW 292 (719)
T ss_dssp CCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEEECSSSSSE
T ss_pred CCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEcccCCCCCC
Confidence 7889999876532 11 11245568999999985 355554322 2488899 6655
Q ss_pred CCCCCCCCCCccEE--EecCCCCee-----EEEEcCCCCCEEE-EEeCCC--cEEEEECCCCCeeEEEEecCCCCCEEEE
Q 010769 386 KSDPDSTSQQSSFT--LHAHDKAVC-----TISYNPLVPNLLA-TGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 386 ~~~~~~~~~~~~~~--~~~h~~~v~-----~l~~sp~~~~~l~-t~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 455 (502)
.. ..+.. ...|...+. .+.|+|+|..+++ ++..+| .|.+|++.+++. ..+..+...+..+
T Consensus 293 ~~-------~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~---~~lt~~~~~v~~~ 362 (719)
T 1z68_A 293 DC-------PKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA---IQITSGKWEAINI 362 (719)
T ss_dssp EC-------CGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC---EECSCSSSCEEEE
T ss_pred ce-------EEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce---EecccCceEEEEE
Confidence 21 11111 145677676 8899999854444 344555 477778777652 3344455568887
Q ss_pred EEcCCCCcEEEEEeC----CCcEEEEECCC
Q 010769 456 AFSEDSPFVLAIGGS----KGKLEIWDTLS 481 (502)
Q Consensus 456 ~~spd~~~llasg~~----dg~i~vwd~~~ 481 (502)
.++ ++..+++++.. .+.+++|.+..
T Consensus 363 ~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 363 FRV-TQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp EEE-CSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred EEE-eCCEEEEEEecCCCCCceEEEEEEeC
Confidence 777 88766666554 47889998764
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.76 E-value=2.5e-16 Score=152.20 Aligned_cols=238 Identities=9% Similarity=0.084 Sum_probs=156.7
Q ss_pred cccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCC--CcceeeeecCCCCCCCCCCEE-EEecCCCc
Q 010769 144 DMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA--FPLCMAWLDCPLKDREKGNFM-AVGSMEPA 220 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~--~~~~~~w~~~~~~~s~~~~~l-a~g~~dg~ 220 (502)
.+++++++.++++++.++ .|++|+.... .+.. ....+. .|..+.| +|+++++ +++..++.
T Consensus 4 g~~~~~~~~~~v~~~~~~-----~v~~~d~~~~---~~~~--~~~~~~~~~~~~~~~-------s~dg~~~~v~~~~~~~ 66 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPN-----NLHVVDVASD---TVYK--SCVMPDKFGPGTAMM-------APDNRTAYVLNNHYGD 66 (349)
T ss_dssp CCCCCTTCEEEEEEETTT-----EEEEEETTTT---EEEE--EEECSSCCSSCEEEE-------CTTSSEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCC-----eEEEEECCCC---cEEE--EEecCCCCCCceeEE-------CCCCCEEEEEeCCCCc
Confidence 467888999999998777 6777776544 2221 112222 3556665 7898865 45567899
Q ss_pred EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC------------
Q 010769 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD------------ 288 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D------------ 288 (502)
|.+||+.+......... + .....+...+.+++|+|++ .+|++++.+
T Consensus 67 i~~~d~~t~~~~~~~~~-~--------------------~~~~~~~~~~~~~~~spdg-~~l~~~~~~~~~~~~~~~~~~ 124 (349)
T 1jmx_B 67 IYGIDLDTCKNTFHANL-S--------------------SVPGEVGRSMYSFAISPDG-KEVYATVNPTQRLNDHYVVKP 124 (349)
T ss_dssp EEEEETTTTEEEEEEES-C--------------------CSTTEEEECSSCEEECTTS-SEEEEEEEEEEECSSCEEECC
T ss_pred EEEEeCCCCcEEEEEEc-c--------------------cccccccccccceEECCCC-CEEEEEcccccccccccccCC
Confidence 99999975432211000 0 0000013447899999995 577777755
Q ss_pred CcEEEEECCCCee---eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe---------------
Q 010769 289 KQVKIWDVAAGKC---NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA--------------- 350 (502)
Q Consensus 289 g~v~vwd~~~~~~---~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~--------------- 350 (502)
+.|.+||+.+++. +..+. +...+.+++|+|++ + +++++ +.|.+||+.+++.......
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~dg-~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFP-MPRQVYLMRAADDG-S-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLY 199 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEE-CCSSCCCEEECTTS-C-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCC
T ss_pred CeEEEEECCCccccceeeecc-CCCcccceeECCCC-c-EEEcc--CcEEEEeCCCCceeccccccccCCccccCcccee
Confidence 8999999988543 33444 34468899999999 5 44443 4499999987653221100
Q ss_pred -----------------------------------------------------ecCCeEEEEeCC-CCCCEEEEEeCCCe
Q 010769 351 -----------------------------------------------------VAADVESLAWDP-HAEHSFVVSLEDGT 376 (502)
Q Consensus 351 -----------------------------------------------------~~~~v~~v~~~p-~~~~~l~~~~~dg~ 376 (502)
....+..++|+| ++. +++++ ++.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~-~l~~~--~~~ 276 (349)
T 1jmx_B 200 FWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPN-QIYGV--LNR 276 (349)
T ss_dssp CCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTT-EEEEE--ESE
T ss_pred eecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCC-EEEEE--cCe
Confidence 011355677889 776 56666 889
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
|.+||+.+. +.+..+. ....+.+++|+|++ ++|++++.++.|++||+.+.+.
T Consensus 277 v~~~d~~~~---------~~~~~~~-~~~~~~~~~~s~dg-~~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 277 LAKYDLKQR---------KLIKAAN-LDHTYYCVAFDKKG-DKLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp EEEEETTTT---------EEEEEEE-CSSCCCEEEECSSS-SCEEEESBSSEEEEEETTTTEE
T ss_pred EEEEECccC---------eEEEEEc-CCCCccceEECCCC-CEEEEecCCCeEEEEeccccce
Confidence 999999876 4444544 33457899999998 6666678889999999998874
No 163
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.75 E-value=1.2e-16 Score=157.45 Aligned_cols=300 Identities=11% Similarity=0.013 Sum_probs=173.6
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
..+.+++|+|+|+.|+.+...+. ...||+++........+..++. ....+..| +|+|++|+.++.++
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g--~~~l~~~d~~~~~~~~l~~~~~----~~~~~~~~-------spdg~~l~~~~~~~ 102 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDG--NRNYYLLNLETQQAVQLTEGKG----DNTFGGFI-------STDERAFFYVKNEL 102 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTS--SCEEEEEETTTTEEEECCCSSC----BCTTTCEE-------CTTSSEEEEEETTT
T ss_pred eeeecCcCCCCCCEEEEEEecCC--CceEEEEECCCCcEEEeecCCC----CccccceE-------CCCCCEEEEEEcCC
Confidence 34788999999999988876532 2367888765541111111111 11112344 89999999999999
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc----cceeeEEecCCCCcEEEEE-----ecCCc
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT----DSVLGLAWNKEFRNILASA-----SADKQ 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~----~~V~~l~~~~~~~~~l~sg-----s~Dg~ 290 (502)
.|++|++..+.... ...... .. .. . .. ...+.... .....+.|+|++. .++.+ ..+..
T Consensus 103 ~l~~~d~~~~~~~~-~~~~~~--~~-----~~--~-g~-~l~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 103 NLMKVDLETLEEQV-IYTVDE--EW-----KG--Y-GT-WVANSDCTKLVGIEILKRDWQPLTS-WEKFAEFYHTNPTCR 169 (396)
T ss_dssp EEEEEETTTCCEEE-EEECCT--TE-----EE--E-EE-EEECTTSSEEEEEEEEGGGCCCCCS-HHHHHHHHHTCCCEE
T ss_pred cEEEEECCCCCcEE-EEeccc--cc-----CC--C-CC-EEEeccCCccccccccccccCCCCc-ceeeeeeccCCCcce
Confidence 99999987643211 000000 00 00 0 00 00000000 0001145778744 44433 45678
Q ss_pred EEEEECCCCeeeEEeccCCCCeEEEEEcC-CCCcEEEEEECC------CcEEEEeCCCCCCccceEee-cCCeEEEEeCC
Q 010769 291 VKIWDVAAGKCNLTLEHHTDKVQAVAWNH-HSPQILLSGSFD------RSVVMKDARISTHSGFKWAV-AADVESLAWDP 362 (502)
Q Consensus 291 v~vwd~~~~~~~~~~~~h~~~v~~l~~~~-~~~~~l~s~~~d------g~i~vwd~~~~~~~~~~~~~-~~~v~~v~~~p 362 (502)
|.+||+.+++..... .+...+..+.|+| ++ ..|+.++.+ ..|.+|++............ ...+..++|+|
T Consensus 170 l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg-~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~sp 247 (396)
T 3c5m_A 170 LIKVDIETGELEVIH-QDTAWLGHPIYRPFDD-STVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIP 247 (396)
T ss_dssp EEEEETTTCCEEEEE-EESSCEEEEEEETTEE-EEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECT
T ss_pred EEEEECCCCcEEeec-cCCcccccceECCCCC-CEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECC
Confidence 999999988765544 4677899999999 66 555555443 36888888765433222211 22477899999
Q ss_pred CCCCEEEEEeCC----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC-CCCCEEEEEe-------------
Q 010769 363 HAEHSFVVSLED----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP-LVPNLLATGS------------- 424 (502)
Q Consensus 363 ~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~t~s------------- 424 (502)
++..+++++..+ +.|++||+.++ .. ..+..... .. +.|+| ++ ++|++++
T Consensus 248 dg~~l~~~~~~~~~~~~~l~~~d~~~g---------~~-~~l~~~~~-~~-~~~s~~dg-~~l~~~~~~~p~~~~~~~~~ 314 (396)
T 3c5m_A 248 DGSAMAYVSYFKGQTDRVIYKANPETL---------EN-EEVMVMPP-CS-HLMSNFDG-SLMVGDGCDAPVDVADADSY 314 (396)
T ss_dssp TSSCEEEEEEETTTCCEEEEEECTTTC---------CE-EEEEECCS-EE-EEEECSSS-SEEEEEECCC----------
T ss_pred CCCEEEEEecCCCCccceEEEEECCCC---------Ce-EEeeeCCC-CC-CCccCCCC-ceEEEecCCcceeecccccc
Confidence 987555554432 44999999875 22 11221222 33 88999 88 6777654
Q ss_pred ---CCCcEEEEECCCCCeeEEEEecCCC--------CCEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 425 ---TDKMVKLWDLSNNQPSCIASRNPKA--------GAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 425 ---~dg~i~vwd~~~~~~~~~~~~~~~~--------~~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
.++.|++||+.+++...+....... ..+..++|+|+|+++++++..++...||.+.
T Consensus 315 ~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 315 NIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred ccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 3478999999887643333222100 0256678999999756555556665565543
No 164
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=5.7e-15 Score=138.82 Aligned_cols=237 Identities=14% Similarity=0.145 Sum_probs=164.9
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEec-CCCCcEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN-KEFRNILAS 284 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~-~~~~~~l~s 284 (502)
+++++++++.+.++.|.+|+... .... .++. .....+|...+.++++. ++ ++++++
T Consensus 38 ~~~g~l~v~~~~~~~i~~~d~~g-~~~~---~~~~------------------~~~~~~~~~~p~~i~~~~~~-g~l~v~ 94 (286)
T 1q7f_A 38 NAQNDIIVADTNNHRIQIFDKEG-RFKF---QFGE------------------CGKRDSQLLYPNRVAVVRNS-GDIIVT 94 (286)
T ss_dssp CTTCCEEEEEGGGTEEEEECTTS-CEEE---EECC------------------BSSSTTCBSSEEEEEEETTT-TEEEEE
T ss_pred CCCCCEEEEECCCCEEEEECCCC-cEEE---Eecc------------------cCCCcccccCceEEEEEcCC-CeEEEE
Confidence 68899888888899999999762 2111 1100 00112455678999995 55 556665
Q ss_pred Eec-CCcEEEEECCCCeeeEEec-cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe---ecCCeEEEE
Q 010769 285 ASA-DKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---VAADVESLA 359 (502)
Q Consensus 285 gs~-Dg~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---~~~~v~~v~ 359 (502)
... ++.|.+|+ .+++.+..+. .+...+.++++++++ +++++...++.|.+|+... .... ... ....+..++
T Consensus 95 ~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g-~~~~-~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 95 ERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNG-NVLH-KFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTS-CEEE-EEECTTTCSSEEEEE
T ss_pred cCCCCCEEEEEC-CCCcEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCC-CEEE-EeCCCCccCCcEEEE
Confidence 543 88999999 5677776664 344678999999998 7888777889999999653 2222 222 224588999
Q ss_pred eCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC--CCCeeEEEEcCCCCCEEEEEeCCC-cEEEEECCC
Q 010769 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDK-MVKLWDLSN 436 (502)
Q Consensus 360 ~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~t~s~dg-~i~vwd~~~ 436 (502)
++|++. ++++...++.|++|+... ..+..+..+ ...+.+++++|++ +++++...++ .|.+|+..
T Consensus 171 ~~~~g~-l~v~~~~~~~i~~~~~~g----------~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~- 237 (286)
T 1q7f_A 171 VNDKQE-IFISDNRAHCVKVFNYEG----------QYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQD- 237 (286)
T ss_dssp ECSSSE-EEEEEGGGTEEEEEETTC----------CEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTT-
T ss_pred ECCCCC-EEEEECCCCEEEEEcCCC----------CEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCC-
Confidence 999765 666777789999999743 344444433 3578999999998 8888887775 99999965
Q ss_pred CCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 437 NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 437 ~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
++.............+.+++++|+|. ++++ +.+++|++|++.....
T Consensus 238 g~~~~~~~~~~~~~~~~~i~~~~~g~-l~vs-~~~~~v~v~~~~~~~p 283 (286)
T 1q7f_A 238 GQLISALESKVKHAQCFDVALMDDGS-VVLA-SKDYRLYIYRYVQLAP 283 (286)
T ss_dssp SCEEEEEEESSCCSCEEEEEEETTTE-EEEE-ETTTEEEEEECSCCCC
T ss_pred CCEEEEEcccCCCCcceeEEECCCCc-EEEE-CCCCeEEEEEcccccc
Confidence 44322233333334588999999997 5666 5789999999866544
No 165
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=1.6e-15 Score=149.18 Aligned_cols=242 Identities=10% Similarity=0.014 Sum_probs=159.9
Q ss_pred CCCCCCCCEEEEecC-CCc--EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCC
Q 010769 203 LKDREKGNFMAVGSM-EPA--IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~-dg~--I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
++|||+|++||.++. +|. |.+|++.++.. .....+|...+.++.|+|+ +
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~---------------------------~~lt~~~~~~~~~~~~spd-g 92 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVA---------------------------TQLTEGRGDNTFGGFLSPD-D 92 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEE---------------------------EECCCSSCBCSSSCEECTT-S
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCce---------------------------EEeeeCCCCCccceEEcCC-C
Confidence 455999999999887 664 77778764321 1122345556667889999 5
Q ss_pred cEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEE--cCCCCcEEEEE----------------------ECCCcEE
Q 010769 280 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAW--NHHSPQILLSG----------------------SFDRSVV 335 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~--~~~~~~~l~s~----------------------~~dg~i~ 335 (502)
..|+.++.++.|++||+.+++....+..+...+....| ++++ .+++.. ..+..|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 171 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLM 171 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEE
Confidence 58888898999999999999877766666665654444 8888 666532 2446799
Q ss_pred EEeCCCCCCccceEeecCCeEEEEeCC-CCCCEEEEEeC-----CCeEEEEECCCCCCCCCCCCCCccEEEecCC--CCe
Q 010769 336 MKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLE-----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAV 407 (502)
Q Consensus 336 vwd~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~l~~~~~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~--~~v 407 (502)
+||+.++.... ...+...+..++|+| ++..++++... ...|.++|+... ....+..+. ..+
T Consensus 172 ~~d~~~g~~~~-l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~----------~~~~l~~~~~~~~~ 240 (388)
T 3pe7_A 172 RVDLKTGESTV-ILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT----------NMRKVKTHAEGESC 240 (388)
T ss_dssp EEETTTCCEEE-EEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC----------CCEESCCCCTTEEE
T ss_pred EEECCCCceEE-eecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC----------ceEEeeeCCCCccc
Confidence 99998876433 445667789999999 87644344432 337888887643 233343343 357
Q ss_pred eEEEEcCCCCCEEEEEeCCC----cEEEEECCCCCeeEEEEecCCCCC---EEEEEEcCCCCcEEEEE--------eCCC
Q 010769 408 CTISYNPLVPNLLATGSTDK----MVKLWDLSNNQPSCIASRNPKAGA---VFSVAFSEDSPFVLAIG--------GSKG 472 (502)
Q Consensus 408 ~~l~~sp~~~~~l~t~s~dg----~i~vwd~~~~~~~~~~~~~~~~~~---v~~~~~spd~~~llasg--------~~dg 472 (502)
..++|+|+|..+++++..++ .|++||+.+++...+.....+... ...+.|+|+|++++++. ..+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 78999999944444443322 399999999886555554431100 11136999999755443 4566
Q ss_pred cEEEEECCCCcc
Q 010769 473 KLEIWDTLSDAG 484 (502)
Q Consensus 473 ~i~vwd~~~~~~ 484 (502)
.|++||+.+++.
T Consensus 321 ~i~~~d~~~~~~ 332 (388)
T 3pe7_A 321 FLYVFNMKNGTQ 332 (388)
T ss_dssp EEEEEETTTTEE
T ss_pred EEEEEeccCCce
Confidence 899999988764
No 166
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.72 E-value=3.5e-15 Score=143.46 Aligned_cols=202 Identities=19% Similarity=0.126 Sum_probs=148.4
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCe-eeEEe---------ccCCCCeEEEEEcC-CCCcEEEEEE-CC
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTL---------EHHTDKVQAVAWNH-HSPQILLSGS-FD 331 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~-~~~~~---------~~h~~~v~~l~~~~-~~~~~l~s~~-~d 331 (502)
++-....+|+++|++ +++++.+.++.|++|+..... .+..+ ..+......|+++| ++ .++++.+ .+
T Consensus 88 ~~~~~p~gia~d~~g-~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~ 165 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDG-NYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCN 165 (329)
T ss_dssp TTCSSEEEEEECTTS-CEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSC
T ss_pred CccCCceEEEECCCC-CEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCC
Confidence 345678999999994 588888889999999976542 45555 23455789999999 55 7888876 69
Q ss_pred CcEEEEeCCCCCCccceEee----------cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-
Q 010769 332 RSVVMKDARISTHSGFKWAV----------AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL- 400 (502)
Q Consensus 332 g~i~vwd~~~~~~~~~~~~~----------~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~- 400 (502)
+.|++|+.. +......... -.....++++|++..++++...++.|++|+..++ ..+..+
T Consensus 166 ~~I~~~~~~-g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G---------~~~~~~~ 235 (329)
T 3fvz_A 166 SRIVQFSPS-GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTK---------EFVREIK 235 (329)
T ss_dssp CEEEEECTT-SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTC---------CEEEEEC
T ss_pred CeEEEEcCC-CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCC---------cEEEEEe
Confidence 999999943 3332212111 1237899999985667888888999999999865 445555
Q ss_pred -ecCCCCeeEEEEcCCCCCEEEEEe-------CCCcEEEEECCCCCeeEEEEe---cCCCCCEEEEEEcCCCCcEEEEEe
Q 010769 401 -HAHDKAVCTISYNPLVPNLLATGS-------TDKMVKLWDLSNNQPSCIASR---NPKAGAVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 401 -~~h~~~v~~l~~sp~~~~~l~t~s-------~dg~i~vwd~~~~~~~~~~~~---~~~~~~v~~~~~spd~~~llasg~ 469 (502)
..+...+.+++|+| + .++++.+ .+..|++|++.+++. +..+ ..+...+..++++|+|. ++++..
T Consensus 236 ~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~~p~~ia~~~dG~-lyvad~ 310 (329)
T 3fvz_A 236 HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGEI--IDVFKPVRKHFDMPHDIVASEDGT-VYIGDA 310 (329)
T ss_dssp CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCCE--EEEECCSSSCCSSEEEEEECTTSE-EEEEES
T ss_pred ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCeE--EEEEcCCCCccCCeeEEEECCCCC-EEEEEC
Confidence 34566788999999 3 4444433 345899999998873 4443 35667799999999995 788888
Q ss_pred CCCcEEEEECCCC
Q 010769 470 SKGKLEIWDTLSD 482 (502)
Q Consensus 470 ~dg~i~vwd~~~~ 482 (502)
.+++|++|++...
T Consensus 311 ~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 311 HTNTVWKFTLTEK 323 (329)
T ss_dssp SSCCEEEEEEEEC
T ss_pred CCCEEEEEeCCcc
Confidence 8999999998653
No 167
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.72 E-value=6.6e-15 Score=143.75 Aligned_cols=249 Identities=9% Similarity=0.038 Sum_probs=156.7
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCE--EEEec-
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNF--MAVGS- 216 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~--la~g~- 216 (502)
..+..++|+|++++|++++.+ .+.+|.++. .+ .+...........|.++ .++|+|++ ++++.
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~----~v~~~~~~~-~g---~~~~~~~~~~~g~~~~~-------~~spdg~~l~~~~~~~ 104 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMK----KWSSFAVKS-PT---EIVHEASHPIGGHPRAN-------DADTNTRAIFLLAAKQ 104 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBT----EEEEEEEEE-TT---EEEEEEEEECCSSGGGG-------CTTSCCEEEEEEECSS
T ss_pred CCCcEEEECCCCCEEEEEccc----eEEEEEECC-CC---CEEEeeEeecCCCCccE-------EECCCCCEEEEEEecC
Confidence 357789999999999888754 567777652 22 22111111111224444 34899994 55654
Q ss_pred ------------CCCcEEEeeCCC-CCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEE
Q 010769 217 ------------MEPAIEIWDLDV-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILA 283 (502)
Q Consensus 217 ------------~dg~I~iwdl~~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~ 283 (502)
.+|.+.+|+++. +....... .....+...+.+++|+|++. +|+
T Consensus 105 ~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~-----------------------~~~~~~~~~~~~~~~spdG~-~l~ 160 (365)
T 1jof_A 105 PPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQ-----------------------NYEYQENTGIHGMVFDPTET-YLY 160 (365)
T ss_dssp TTCCEEEEEESSSCCEEEEEEECTTCCEEEEEE-----------------------EEECCTTCCEEEEEECTTSS-EEE
T ss_pred CcceeccceeecCCceEEEEccCCCCcCcceEe-----------------------eEEeCCCCcceEEEECCCCC-EEE
Confidence 689999999963 21110000 00012456789999999954 566
Q ss_pred EEe-cCCcEEEEECC-CCeee--EEec--cCCCCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCCC--CCCcc---ceEee
Q 010769 284 SAS-ADKQVKIWDVA-AGKCN--LTLE--HHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARI--STHSG---FKWAV 351 (502)
Q Consensus 284 sgs-~Dg~v~vwd~~-~~~~~--~~~~--~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~--~~~~~---~~~~~ 351 (502)
++. .++.|++|++. +++.. ..+. .|...+..++|+|++ ++|++++ .++.|.+|++.. ++... .....
T Consensus 161 ~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg-~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~ 239 (365)
T 1jof_A 161 SADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTG-NYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI 239 (365)
T ss_dssp EEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS
T ss_pred EEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCC-CEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC
Confidence 554 46899999998 67643 3333 245679999999999 6666665 478999998753 33211 01111
Q ss_pred -------cC------CeEEEE-eCCCCCCEEEEEeC-CC-----eEEEEECCCCCCCCCCCCCCccE---EEecCCCCee
Q 010769 352 -------AA------DVESLA-WDPHAEHSFVVSLE-DG-----TIKGFDIRTAKSDPDSTSQQSSF---TLHAHDKAVC 408 (502)
Q Consensus 352 -------~~------~v~~v~-~~p~~~~~l~~~~~-dg-----~i~i~d~~~~~~~~~~~~~~~~~---~~~~h~~~v~ 408 (502)
.. .+..++ |+|++. +++++.. .+ .|.+|++... ..... ....+...+.
T Consensus 240 ~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~--------g~~~~~~~~~~~~~~~~~ 310 (365)
T 1jof_A 240 PPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDC--------GSIEKQLFLSPTPTSGGH 310 (365)
T ss_dssp CTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTT--------SCEEEEEEEEECSSCCTT
T ss_pred CCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCC--------CCEEEeeeeeecCCCCcc
Confidence 11 478899 999987 4555433 33 8999999632 12222 2334555678
Q ss_pred EEEEcC---CCCCEEEEEeC-CCcEEEEECCCCC
Q 010769 409 TISYNP---LVPNLLATGST-DKMVKLWDLSNNQ 438 (502)
Q Consensus 409 ~l~~sp---~~~~~l~t~s~-dg~i~vwd~~~~~ 438 (502)
.++|+| ++ ++|++++. ++.|++|++....
T Consensus 311 ~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~~ 343 (365)
T 1jof_A 311 SNAVSPCPWSD-EWMAITDDQEGWLEIYRWKDEF 343 (365)
T ss_dssp CCCEEECTTCT-TEEEEECSSSCEEEEEEEETTE
T ss_pred cceecCCCcCC-CEEEEEEcCCCeEEEEEEchhh
Confidence 899999 77 77887776 4899999987653
No 168
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=4.9e-16 Score=166.24 Aligned_cols=242 Identities=12% Similarity=0.153 Sum_probs=155.9
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|+|.+|+++ ++.|++|++.++.+. .++.+. ....+......++|||++ .+|+.+
T Consensus 25 ~~dg~~~~~~--~~~i~~~~~~~~~~~---~~~~~~-------------------~~~~~~~~~~~~~~Spdg-~~l~~~ 79 (740)
T 4a5s_A 25 ISDHEYLYKQ--ENNILVFNAEYGNSS---VFLENS-------------------TFDEFGHSINDYSISPDG-QFILLE 79 (740)
T ss_dssp CSSSEEEEEE--TTEEEEEETTTCCEE---EEECTT-------------------TTTTCCSCCCEEEECTTS-SEEEEE
T ss_pred CCCCcEEEEc--CCcEEEEECCCCceE---EEEech-------------------hhhhhcccccceEECCCC-CEEEEE
Confidence 7999999997 899999999865432 111110 001122233458999994 577887
Q ss_pred ecC---------CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eec---
Q 010769 286 SAD---------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVA--- 352 (502)
Q Consensus 286 s~D---------g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~--- 352 (502)
+.+ +.+.+||+.++++. .+..|...+...+|+|+| +.|+.+ .++.|++|++.++....... ...
T Consensus 80 ~~~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i~~~~~~~~~~~~lt~~g~~~~~ 156 (740)
T 4a5s_A 80 YNYVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVG-HKLAYV-WNNDIYVKIEPNLPSYRITWTGKEDII 156 (740)
T ss_dssp EEEEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSST-TCEEEE-ETTEEEEESSTTSCCEECCSCCBTTTE
T ss_pred ECCeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCC-CEEEEE-ECCeEEEEECCCCceEEEcCCCCccce
Confidence 776 56679999999865 466678899999999999 667666 47899999998766443221 111
Q ss_pred --------------CCeEEEEeCCCCCCEEEEEeCCC-----------------------------------eEEEEECC
Q 010769 353 --------------ADVESLAWDPHAEHSFVVSLEDG-----------------------------------TIKGFDIR 383 (502)
Q Consensus 353 --------------~~v~~v~~~p~~~~~l~~~~~dg-----------------------------------~i~i~d~~ 383 (502)
+....+.|+|+|..++++...++ .|++||+.
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~ 236 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTD 236 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETT
T ss_pred ecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECC
Confidence 12235899999875444433222 46667776
Q ss_pred C---CCCCCCCCCCCccEEEe------cCCCCeeEEEEcCCCCCEEEEEeC----CCcEEEEECCCCC-------eeEEE
Q 010769 384 T---AKSDPDSTSQQSSFTLH------AHDKAVCTISYNPLVPNLLATGST----DKMVKLWDLSNNQ-------PSCIA 443 (502)
Q Consensus 384 ~---~~~~~~~~~~~~~~~~~------~h~~~v~~l~~sp~~~~~l~t~s~----dg~i~vwd~~~~~-------~~~~~ 443 (502)
+ +.. .....+. +|...+..++|+|++ ++++.... +..|++||+.+++ ...+.
T Consensus 237 ~~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~wspdg-~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~ 308 (740)
T 4a5s_A 237 SLSSVTN-------ATSIQITAPASMLIGDHYLCDVTWATQE-RISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHI 308 (740)
T ss_dssp SCCSSSC-------CCEEEECCCHHHHTSCEEEEEEEEEETT-EEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEE
T ss_pred CCCCCCc-------ceEEEecCCccCCCCCeEEEEEEEeCCC-eEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEee
Confidence 5 310 0222333 277789999999998 65554432 3369999998876 11111
Q ss_pred EecCCCCCEE-----EEEEcCCCCcEEEEEe-CCC--cEEEEECCCCcc
Q 010769 444 SRNPKAGAVF-----SVAFSEDSPFVLAIGG-SKG--KLEIWDTLSDAG 484 (502)
Q Consensus 444 ~~~~~~~~v~-----~~~~spd~~~llasg~-~dg--~i~vwd~~~~~~ 484 (502)
. ..+.+.|. ...|+|||+.++...+ .+| .|++|++.++..
T Consensus 309 ~-~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~ 356 (740)
T 4a5s_A 309 E-MSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC 356 (740)
T ss_dssp E-ECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC
T ss_pred e-ccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce
Confidence 1 33444443 6889999996442444 444 588888876554
No 169
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.70 E-value=4e-15 Score=159.20 Aligned_cols=287 Identities=9% Similarity=0.084 Sum_probs=171.2
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC--
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-- 218 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d-- 218 (502)
...++.|+|++.+|+++ ++ .|+.|+...+....+...|... . ..+.+ ..+.+||+|++||.++.+
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~-----~i~~~~~~~~~~~~~~~~~~~~--~--~~~~~--~~~~~Spdg~~l~~~~~~~~ 84 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--EN-----NILVFNAEYGNSSVFLENSTFD--E--FGHSI--NDYSISPDGQFILLEYNYVK 84 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TT-----EEEEEETTTCCEEEEECTTTTT--T--CCSCC--CEEEECTTSSEEEEEEEEEE
T ss_pred cccccEECCCCcEEEEc--CC-----cEEEEECCCCceEEEEechhhh--h--hcccc--cceEECCCCCEEEEEECCee
Confidence 35678999999988886 54 5566665444222333333211 1 11111 012238999999999876
Q ss_pred -------CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcE
Q 010769 219 -------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQV 291 (502)
Q Consensus 219 -------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v 291 (502)
+.+.+||+.++... .+..|...+...+|||+| +.||.+ .++.|
T Consensus 85 ~~r~~~~~~~~~~d~~~~~~~----------------------------~l~~~~~~~~~~~~SPdG-~~la~~-~~~~i 134 (740)
T 4a5s_A 85 QWRHSYTASYDIYDLNKRQLI----------------------------TEERIPNNTQWVTWSPVG-HKLAYV-WNNDI 134 (740)
T ss_dssp CSSSCEEEEEEEEETTTTEEC----------------------------CSSCCCTTEEEEEECSST-TCEEEE-ETTEE
T ss_pred eEEEccceEEEEEECCCCcEE----------------------------EcccCCCcceeeEECCCC-CEEEEE-ECCeE
Confidence 56679999753221 233567789999999995 467776 46899
Q ss_pred EEEECCCCeeeEE-eccCCCCe-----------------EEEEEcCCCCcEEEEEECCC---------------------
Q 010769 292 KIWDVAAGKCNLT-LEHHTDKV-----------------QAVAWNHHSPQILLSGSFDR--------------------- 332 (502)
Q Consensus 292 ~vwd~~~~~~~~~-~~~h~~~v-----------------~~l~~~~~~~~~l~s~~~dg--------------------- 332 (502)
++|++.+++..+. ..++...+ .++.|+|+| +.|+.++.|.
T Consensus 135 ~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg-~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNG-TFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTS-SEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCC-CEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 9999988875442 22333323 358999999 7677664321
Q ss_pred ---------------cEEEEeCCC---CCC---ccceE-----eecCCeEEEEeCCCCCCEEEEEeC---CCeEEEEECC
Q 010769 333 ---------------SVVMKDARI---STH---SGFKW-----AVAADVESLAWDPHAEHSFVVSLE---DGTIKGFDIR 383 (502)
Q Consensus 333 ---------------~i~vwd~~~---~~~---~~~~~-----~~~~~v~~v~~~p~~~~~l~~~~~---dg~i~i~d~~ 383 (502)
.|++||+.+ +.. ..... .+...+..++|+|++..+++.... +..|.+||+.
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~ 293 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYD 293 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEE
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECC
Confidence 478888887 532 11111 144458899999997633333322 2369999998
Q ss_pred CCCCCCCCCCCCccEEE--ecCCCCee-----EEEEcCCCCCEEE-EEeC-CC--cEEEEECCCCCeeEEEEecCCCCCE
Q 010769 384 TAKSDPDSTSQQSSFTL--HAHDKAVC-----TISYNPLVPNLLA-TGST-DK--MVKLWDLSNNQPSCIASRNPKAGAV 452 (502)
Q Consensus 384 ~~~~~~~~~~~~~~~~~--~~h~~~v~-----~l~~sp~~~~~l~-t~s~-dg--~i~vwd~~~~~~~~~~~~~~~~~~v 452 (502)
++...... ..+..+ ..|...|. .++|+|+| +.|+ ..+. +| .|++|++.++... .+......|
T Consensus 294 tg~~~~~~---~~~~~l~~~~~~~~v~~~~~~~p~fspDG-~~l~~~~s~~~G~~~l~~~~~~~~~~~---~lT~g~~~v 366 (740)
T 4a5s_A 294 ESSGRWNC---LVARQHIEMSTTGWVGRFRPSEPHFTLDG-NSFYKIISNEEGYRHICYFQIDKKDCT---FITKGTWEV 366 (740)
T ss_dssp TTTTEEEE---CGGGCEEEECSSSCSSSSSCCCCEECTTS-SEEEEEEECTTSCEEEEEEETTCSSCE---ESCCSSSCE
T ss_pred CCccccce---eEEEEeeeccCCceEccCcCCCceEcCCC-CEEEEEEEcCCCceEEEEEECCCCceE---ecccCCEEE
Confidence 86200000 011222 45665554 78999999 5554 5553 43 5888998877632 333334456
Q ss_pred EEEEEcCCCCcEEEEEeC----CCcEEEEEC
Q 010769 453 FSVAFSEDSPFVLAIGGS----KGKLEIWDT 479 (502)
Q Consensus 453 ~~~~~spd~~~llasg~~----dg~i~vwd~ 479 (502)
..+.+ +++..++++++. .+...||.+
T Consensus 367 ~~~~~-~d~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 367 IGIEA-LTSDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp EEEEE-ECSSEEEEEESCGGGCTTCBEEEEE
T ss_pred EEEEE-EeCCEEEEEEecCCCCCceeEEEEE
Confidence 65542 446666666655 234445544
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=2.8e-15 Score=158.43 Aligned_cols=297 Identities=9% Similarity=0.012 Sum_probs=178.3
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccC----CCcceeeeecCCCCCCCCCCE-E
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIP----AFPLCMAWLDCPLKDREKGNF-M 212 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~----~~~~~~~w~~~~~~~s~~~~~-l 212 (502)
|...+..++++++..+++.+..+.+ ....||.+... +....+..+...... .......|. .||+|++ |
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~-~~~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~SPDg~~~l 94 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEA-GRATLVRRRAD-GAEESALPAPWNVRNRVFEYSGFPWAGV-----PRPAGGPLL 94 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTT-TEEEEEEECTT-SCEEESSCTTCCBCCCGGGTCCCCEEEE-----CCSSSSCEE
T ss_pred cCCccceeEEcCCeEEEEecCcccC-CcEEEEEECCC-CCcceeCCCCccccccccccCCccceee-----eecCCCeEE
Confidence 5667889999987655555532221 35688887332 211112222211100 000022231 1489998 7
Q ss_pred EEecC-CCcEEEeeCC--C-CCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 213 AVGSM-EPAIEIWDLD--V-IDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 213 a~g~~-dg~I~iwdl~--~-~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+.++. +..|.+|++. . .. ... + . ......|...+.+++|+|++ +.|++++.+
T Consensus 95 a~~~~~~~~l~~~~~~~~g~~~-~~~--l-~-------------------~~~~~~~~~~~~~~~~spDg-~~l~~~~~~ 150 (662)
T 3azo_A 95 VFTHFGDQRLYAFEPDAPGGAV-PRP--L-T-------------------PVSAVGGGLRWADPVLLPER-GEVWCMAEE 150 (662)
T ss_dssp EEEBTTTCCEEEECTTSTTCCC-CEE--C-S-------------------CCCCSTTCEEEEEEEEETTT-TEEEEEEEE
T ss_pred EEEECCCCeEEEEcCCCCCCCC-CEe--c-c-------------------CCccCCCCccccCcEECCCC-CEEEEEEec
Confidence 76654 4556666554 1 11 100 0 0 00001166788999999995 577777776
Q ss_pred ----------CcEEEEECCC------CeeeEEec-cCCCCeEEEEEcCCCCcEEEEEECC--------CcEEEEeCC-CC
Q 010769 289 ----------KQVKIWDVAA------GKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMKDAR-IS 342 (502)
Q Consensus 289 ----------g~v~vwd~~~------~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~d--------g~i~vwd~~-~~ 342 (502)
..|++|++.+ ++. ..+. .+...+..++|+|+| +.|+.++.+ ..|.+||+. ++
T Consensus 151 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG-~~la~~~~~~~~~~~~~~~i~~~d~~~~g 228 (662)
T 3azo_A 151 FTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDG-RQAVWLAWDHPRMPWEGTELKTARVTEDG 228 (662)
T ss_dssp ECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTS-SEEEEEEECTTCCTTTCEEEEEEEECTTS
T ss_pred ccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCC-CEEEEEECCCCCCCCCCcEEEEEEECCCC
Confidence 5899999988 554 4454 566788889999999 777766644 379999998 45
Q ss_pred ---CCccceEeecCCeEEEEeCCCCCCEEEEEeCCC--eEEEEECCCCCCCCCCCCCCccEEEecCC-CC--------ee
Q 010769 343 ---THSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHD-KA--------VC 408 (502)
Q Consensus 343 ---~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~h~-~~--------v~ 408 (502)
........+...+..++|+|++. +++++..++ .|.+||+.++ . ...+..+. .. +.
T Consensus 229 ~~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~~~~~---------~-~~~l~~~~~~~~~p~w~~~~~ 297 (662)
T 3azo_A 229 RFADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRTGWWNLHRVDPATG---------A-ATQLCRREEEFAGPLWTPGMR 297 (662)
T ss_dssp CEEEEEEEEEETTBCEEEEEECTTSC-EEEEECTTSSCEEEEECTTTC---------C-EEESSCCSSBSSCCCCSTTCC
T ss_pred cccccEEeCCCCCceEcceEECCCCe-EEEEECCCCCeEEEEEECCCC---------c-eeecccccccccCccccccCc
Confidence 22222223357899999999987 788888888 5666665443 1 11222121 11 56
Q ss_pred EEEEcCCCCCEEEEEeCCCcEEEE--ECCCCCeeEEEEecCCCCCEEEE-EEcCCCCcEEEEEeCCC--cEEEEECCCCc
Q 010769 409 TISYNPLVPNLLATGSTDKMVKLW--DLSNNQPSCIASRNPKAGAVFSV-AFSEDSPFVLAIGGSKG--KLEIWDTLSDA 483 (502)
Q Consensus 409 ~l~~sp~~~~~l~t~s~dg~i~vw--d~~~~~~~~~~~~~~~~~~v~~~-~~spd~~~llasg~~dg--~i~vwd~~~~~ 483 (502)
+++|+|++ .++++++. +.++|| |+.+++ +..+..+.+.+..+ +++++. .++++++.+. .|.+|++.+++
T Consensus 298 ~~~~~~~~-~~~~~~~~-~~~~l~~~d~~~~~---~~~l~~~~~~~~~~~s~~~~~-~~~~~~~~~~~~~i~~~d~~~g~ 371 (662)
T 3azo_A 298 WFAPLANG-LIAVVHGK-GAAVLGILDPESGE---LVDAAGPWTEWAATLTVSGTR-AVGVAASPRTAYEVVELDTVTGR 371 (662)
T ss_dssp SEEECTTS-CEEEEEBS-SSCEEEEEETTTTE---EEECCSSCCEEEEEEEEETTE-EEEEEEETTEEEEEEEEETTTCC
T ss_pred eEeEeCCC-EEEEEEEc-CccEEEEEECCCCc---EEEecCCCCeEEEEEecCCCE-EEEEEcCCCCCCEEEEEECCCCc
Confidence 78999987 89999988 999999 555554 45566667777776 554433 2344445554 46666766665
Q ss_pred c
Q 010769 484 G 484 (502)
Q Consensus 484 ~ 484 (502)
.
T Consensus 372 ~ 372 (662)
T 3azo_A 372 A 372 (662)
T ss_dssp E
T ss_pred e
Confidence 4
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.69 E-value=1.3e-14 Score=141.19 Aligned_cols=271 Identities=10% Similarity=0.071 Sum_probs=170.3
Q ss_pred EEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC----------CCcEEEeeCCCCCCCCcee
Q 010769 167 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM----------EPAIEIWDLDVIDEVQPHV 236 (502)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~----------dg~I~iwdl~~~~~~~~~~ 236 (502)
.|++|+.... .+. ........| .+.+ +|+|++|++++. ++.|.+||+.+......+.
T Consensus 32 ~v~v~D~~t~---~~~--~~i~~g~~p-~i~~-------spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~ 98 (361)
T 2oiz_A 32 RVHVYDYTNG---KFL--GMVPTAFNG-HVQV-------SNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEIS 98 (361)
T ss_dssp EEEEEETTTC---CEE--EEEECCEEE-EEEE-------CTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEE
T ss_pred eEEEEECCCC---eEE--EEecCCCCC-ceEE-------CCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEE
Confidence 7777776554 332 122222333 4444 899999998863 5679999987544332221
Q ss_pred eeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcEEEEECCCCeeeEE-eccCCCCeE
Q 010769 237 ILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWDVAAGKCNLT-LEHHTDKVQ 313 (502)
Q Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v~vwd~~~~~~~~~-~~~h~~~v~ 313 (502)
+.. ....+......++++|+++ +|+++.. +++|.+||+.+++.+.. +.. . ...
T Consensus 99 ~~~---------------------~~~~~g~~p~~i~~spdg~-~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~-~-~~~ 154 (361)
T 2oiz_A 99 LPP---------------------KRVQGLNYDGLFRQTTDGK-FIVLQNASPATSIGIVDVAKGDYVEDVTAA-A-GCW 154 (361)
T ss_dssp ECT---------------------TBCCBCCCGGGEEECTTSS-EEEEEEESSSEEEEEEETTTTEEEEEEGGG-T-TEE
T ss_pred cCc---------------------cccccCCCcceEEECCCCC-EEEEECCCCCCeEEEEECCCCcEEEEEecC-C-Ccc
Confidence 110 0011334577899999954 6766653 68999999999998888 653 2 233
Q ss_pred EEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce------EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCC
Q 010769 314 AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 387 (502)
Q Consensus 314 ~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~------~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~ 387 (502)
.+.+.|.+...+++.+.||.+.+|++......... +........+.+++++. .++..+.++.|.++|+.....
T Consensus 155 ~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~~~v~v~d~~~~~~ 233 (361)
T 2oiz_A 155 SVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKD-KAHFVSYYGNVYSADFSGDEV 233 (361)
T ss_dssp EEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSS-EEEEEBTTSEEEEEECSSSSC
T ss_pred eeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCC-EEEEEeCCCeEEEEEecCCCc
Confidence 46678887678899999999999998653222101 00111111223345444 455566789999999875411
Q ss_pred CCCCCCCCccEEEec------C----CCCeeEEEEcCCCCCEEEEEe----------CCCcEEEEECCCCCeeEEEEecC
Q 010769 388 DPDSTSQQSSFTLHA------H----DKAVCTISYNPLVPNLLATGS----------TDKMVKLWDLSNNQPSCIASRNP 447 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~------h----~~~v~~l~~sp~~~~~l~t~s----------~dg~i~vwd~~~~~~~~~~~~~~ 447 (502)
.....+.. + ......++|+|++..++++.+ ..+.|.+||+.+.+ .+..+..
T Consensus 234 -------~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~--~v~~i~~ 304 (361)
T 2oiz_A 234 -------KVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ--RVARIPG 304 (361)
T ss_dssp -------EEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE--EEEEEEC
T ss_pred -------eecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc--EEEEEec
Confidence 11111110 0 111223789999845444443 13479999999987 4555555
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC--cccccc
Q 010769 448 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD--AGISNR 488 (502)
Q Consensus 448 ~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~--~~~~~~ 488 (502)
+. +.+++|+|+|++ |++++. +.|.+||+.++ +.+.++
T Consensus 305 ~~--p~~ia~spdg~~-l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 305 RD--ALSMTIDQQRNL-MLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp TT--CCEEEEETTTTE-EEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred CC--eeEEEECCCCCE-EEEeCC-CeEEEEECCCCcceeeEEe
Confidence 54 899999999995 555665 99999999999 877764
No 172
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.68 E-value=4e-14 Score=150.74 Aligned_cols=289 Identities=10% Similarity=0.031 Sum_probs=182.3
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC-----cEEE
Q 010769 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP-----AIEI 223 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg-----~I~i 223 (502)
|+|+.++.....+....-.+|..+...+.. .+..........-...+ ..+.|||+|++||.++.++ .|++
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~-~~lld~~~l~~~~~~~~----~~~~~SPDg~~la~~~~~~G~~~~~i~v 155 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEA-RVFLDPNILSDDGTVAL----RGYAFSEDGEYFAYGLSASGSDWVTIKF 155 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCC-EEEECGGGGCTTSCEEE----EEEEECTTSSEEEEEEEETTCSCEEEEE
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCc-EEEECHHHhccCCCEEE----EEEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 888888887766544344677776533311 11111111111100011 1123389999999876543 8999
Q ss_pred eeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCc-------------
Q 010769 224 WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ------------- 290 (502)
Q Consensus 224 wdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~------------- 290 (502)
||+.++..... .. ....+.+++|+|++ ..|+.++.++.
T Consensus 156 ~d~~tg~~~~~--------------------------~~--~~~~~~~~~wspDg-~~l~~~~~~~~~~~~~~~~~~~~~ 206 (710)
T 2xdw_A 156 MKVDGAKELPD--------------------------VL--ERVKFSCMAWTHDG-KGMFYNAYPQQDGKSDGTETSTNL 206 (710)
T ss_dssp EETTTTEEEEE--------------------------EE--EEECSCCEEECTTS-SEEEEEECCCCSSCCSSSCCCCCC
T ss_pred EECCCCCCCcc--------------------------cc--cCcccceEEEEeCC-CEEEEEEECCccccccccccccCC
Confidence 99986432210 00 11236789999995 57777777665
Q ss_pred ---EEEEECCCCee----eEEeccCCCCeEEEEEcCCCCcEEEEEEC-----CCcEEEEeCCC------CC-CccceEee
Q 010769 291 ---VKIWDVAAGKC----NLTLEHHTDKVQAVAWNHHSPQILLSGSF-----DRSVVMKDARI------ST-HSGFKWAV 351 (502)
Q Consensus 291 ---v~vwd~~~~~~----~~~~~~h~~~v~~l~~~~~~~~~l~s~~~-----dg~i~vwd~~~------~~-~~~~~~~~ 351 (502)
|++|++.+++. +.....|...+..+.|+|+| ++|+.++. +..|.+||+.+ +. .......+
T Consensus 207 ~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 207 HQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 99999988762 22223355668899999999 55655543 56899999986 43 22323333
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCC---CeEEEEECCCCCCCCCCCCCCccEEEecCCC--CeeEEEEcCCCCCEEEEEeCC
Q 010769 352 AADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--AVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~--~v~~l~~sp~~~~~l~t~s~d 426 (502)
...+.. .|+|++..+++.+..+ +.|.+||+.+.. ......+..|.. .+..++|++.+ .++++...+
T Consensus 286 ~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~-~lv~~~~~~ 356 (710)
T 2xdw_A 286 FEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE-------ESKWKVLVPEHEKDVLEWVACVRSN-FLVLCYLHD 356 (710)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC-------GGGCEEEECCCSSCEEEEEEEETTT-EEEEEEEET
T ss_pred CCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC-------cccceeccCCCCCCeEEEEEEEcCC-EEEEEEEEC
Confidence 444444 4888877555555433 369999987651 012345555544 68889998755 788888888
Q ss_pred Cc--EEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCc
Q 010769 427 KM--VKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDA 483 (502)
Q Consensus 427 g~--i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~---dg~i~vwd~~~~~ 483 (502)
+. |++|++.+++ .+..+..+.+.+..++++|++..++++.++ .++|++||+.+++
T Consensus 357 g~~~l~~~~~~~g~--~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 357 VKNTLQLHDLATGA--LLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TEEEEEEEETTTCC--EEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CEEEEEEEECCCCC--EEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 85 5667876665 344555567789999999999765555443 3689999998876
No 173
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.67 E-value=1.2e-13 Score=132.77 Aligned_cols=268 Identities=9% Similarity=0.023 Sum_probs=172.3
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCc
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA 220 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~ 220 (502)
.|.++.|+|.+..++....+. .+++|.-. .+.... .-...+.++.| +++|++++++..++.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-------~~~~~~--~~~~~~~~~~~-------~~~g~l~~~~~~~~~ 67 (333)
T 2dg1_A 7 DLPTLFYSGKSNSAVPIISES---ELQTITAE-------PWLEIS--KKGLQLEGLNF-------DRQGQLFLLDVFEGN 67 (333)
T ss_dssp CCCBCCSCGGGGCSSCCCCGG---GSCEEECE-------EEEEEE--SSCCCEEEEEE-------CTTSCEEEEETTTCE
T ss_pred ccceeeecCCccceeEEeecc---cCcccccc-------eeEEEe--ccCccccCcEE-------CCCCCEEEEECCCCE
Confidence 477888898888777665554 34454111 111100 01123356666 688998888888999
Q ss_pred EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC----CcEEEEEC
Q 010769 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD----KQVKIWDV 296 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D----g~v~vwd~ 296 (502)
|.+|+....... .....+...+.+++|+|++ .+++++..+ +.|.+||.
T Consensus 68 i~~~d~~~~~~~---------------------------~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~ 119 (333)
T 2dg1_A 68 IFKINPETKEIK---------------------------RPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATE 119 (333)
T ss_dssp EEEECTTTCCEE---------------------------EEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECT
T ss_pred EEEEeCCCCcEE---------------------------EEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeC
Confidence 999998642211 0111345679999999994 577766666 68999999
Q ss_pred CCCeeeEEec--cCCCCeEEEEEcCCCCcEEEEEEC------CCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEE
Q 010769 297 AAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 297 ~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 368 (502)
.+++....+. .+...+.++.++|++ +++++... .+.|..++..+..... .......+..++|+|++..++
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 120 NGDNLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTVTP-IIQNISVANGIALSTDEKVLW 197 (333)
T ss_dssp TSCSCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCEEE-EEEEESSEEEEEECTTSSEEE
T ss_pred CCCEEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEEEE-eecCCCcccceEECCCCCEEE
Confidence 8876543332 245679999999998 66666543 3556666665443322 223345678999999876555
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCCCCCccE--------EEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSF--------TLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 369 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--------~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
++.+.++.|.+|++.+.. ..+. .+..+ ..+..+++++++ +++++...++.|.+||.. ++.
T Consensus 198 v~~~~~~~i~~~d~~~~g--------~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~-g~~- 265 (333)
T 2dg1_A 198 VTETTANRLHRIALEDDG--------VTIQPFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKR-GYP- 265 (333)
T ss_dssp EEEGGGTEEEEEEECTTS--------SSEEEEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTT-SCE-
T ss_pred EEeCCCCeEEEEEecCCC--------cCcccccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCC-CCE-
Confidence 666678899999996421 1111 11122 467889999998 777777778899999984 442
Q ss_pred EEEEecCCC------CCEEEEEEcCCCCcEEEEEeC
Q 010769 441 CIASRNPKA------GAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 441 ~~~~~~~~~------~~v~~~~~spd~~~llasg~~ 470 (502)
+..+..+. ..+.+++|+|++..|++++..
T Consensus 266 -~~~~~~~~~~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 266 -IGQILIPGRDEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp -EEEEECTTGGGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred -EEEEEcCCCccccccCcceEEECCCCCEEEEEeCc
Confidence 22332222 268899999998755555443
No 174
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.65 E-value=5.8e-14 Score=130.58 Aligned_cols=235 Identities=11% Similarity=0.061 Sum_probs=161.6
Q ss_pred CCCCCEEE-EecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REKGNFMA-VGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~~la-~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++|++++ +.+.++.|.+|+...... ......+...+.+|++.+++ +++++
T Consensus 32 ~~~g~l~v~~~~~~~~i~~~~~~~~~~---------------------------~~~~~~~~~~p~~i~~~~~g-~l~v~ 83 (270)
T 1rwi_B 32 DSAGNVYVTSEGMYGRVVKLATGSTGT---------------------------TVLPFNGLYQPQGLAVDGAG-TVYVT 83 (270)
T ss_dssp CTTCCEEEEECSSSCEEEEECC--------------------------------EECCCCSCCSCCCEEECTTC-CEEEE
T ss_pred CCCCCEEEEccCCCCcEEEecCCCccc---------------------------ceEeeCCcCCcceeEECCCC-CEEEE
Confidence 68888777 557788999998653210 00011233567899999984 46655
Q ss_pred EecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHA 364 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~ 364 (502)
.. ++.|.+||................+.++++.+++ +++++...++.|.+|+..+.............+..+++++++
T Consensus 84 ~~-~~~i~~~d~~~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g 161 (270)
T 1rwi_B 84 DF-NNRVVTLAAGSNNQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSG 161 (270)
T ss_dssp ET-TTEEEEECTTCSCCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTC
T ss_pred cC-CCEEEEEeCCCceEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCceeEeeccccCCCceeEEEeCCC
Confidence 55 8899999987654432222233678999999988 777777778899999765543322111222457889999977
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~ 444 (502)
. ++++...++.|.+|+.... ........+...+.++++++++ .++++...++.|.+|+...... ...
T Consensus 162 ~-l~v~~~~~~~i~~~~~~~~---------~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~--~~~ 228 (270)
T 1rwi_B 162 N-VYVTDTDNNRVVKLEAESN---------NQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS--TVL 228 (270)
T ss_dssp C-EEEEEGGGTEEEEECTTTC---------CEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC--EEC
T ss_pred C-EEEEECCCCEEEEEecCCC---------ceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc--eee
Confidence 5 6666667889999998754 2211122233668899999988 7888877788999999876542 222
Q ss_pred ecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 445 RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 445 ~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
...+...+.+++++++|. ++++...++.|++|++...+.
T Consensus 229 ~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 229 PFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp CCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEECCCGGGS
T ss_pred ccCCCCCceeEEECCCCC-EEEEECCCCEEEEEcCCCccc
Confidence 223335689999999998 788888899999999876554
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=2.7e-14 Score=137.22 Aligned_cols=257 Identities=10% Similarity=0.104 Sum_probs=172.7
Q ss_pred cccccccccCCCceEEEEEecCCcc-------------------eeEEEEEecCCCCCCceeeeeccccCCCcceeeeec
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVS-------------------HLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLD 200 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~-------------------~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~ 200 (502)
..+..++++|+|+++++.+.+.... .-.|++++...+ .+...-....-..|..+++
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g---~~~~~~~~~~~~~p~gia~-- 98 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA---EILQSSGKNLFYLPHGLSI-- 98 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC---CEEEEECTTTCSSEEEEEE--
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC---eEEeccCCCccCCceEEEE--
Confidence 4688999999999998887653110 014777776544 3322111111123455554
Q ss_pred CCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCc
Q 010769 201 CPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 280 (502)
Q Consensus 201 ~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~ 280 (502)
+++|+++++.+.++.|++|+.+... .....++... ....-.++.....+|+++|+.+.
T Consensus 99 -----d~~g~l~v~d~~~~~v~~~~~~g~~--~~~~~~~~~~---------------~~g~~~~~~~~P~~ia~~~~~g~ 156 (329)
T 3fvz_A 99 -----DTDGNYWVTDVALHQVFKLDPHSKE--GPLLILGRSM---------------QPGSDQNHFCQPTDVAVEPSTGA 156 (329)
T ss_dssp -----CTTSCEEEEETTTTEEEEECTTCSS--CCSEEESBTT---------------BCCCSTTCCSSEEEEEECTTTCC
T ss_pred -----CCCCCEEEEECCCCEEEEEeCCCCe--EEEEEecccC---------------CCCCCccccCCCcEEEEeCCCCe
Confidence 7899999999989999999986421 1111221100 00001235567899999994366
Q ss_pred EEEEEe-cCCcEEEEECCCCeeeEEeccCC----------CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE
Q 010769 281 ILASAS-ADKQVKIWDVAAGKCNLTLEHHT----------DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW 349 (502)
Q Consensus 281 ~l~sgs-~Dg~v~vwd~~~~~~~~~~~~h~----------~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~ 349 (502)
++++.+ .++.|++|+ .+++.+..+.... .....|+++|++..++++...++.|++|+..+++......
T Consensus 157 lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 157 VFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 777776 689999999 5677777764322 3489999999844888888889999999998665443221
Q ss_pred --eecCCeEEEEeCCCCCCEEEEE-------eCCCeEEEEECCCCCCCCCCCCCCccEEE---ecCCCCeeEEEEcCCCC
Q 010769 350 --AVAADVESLAWDPHAEHSFVVS-------LEDGTIKGFDIRTAKSDPDSTSQQSSFTL---HAHDKAVCTISYNPLVP 417 (502)
Q Consensus 350 --~~~~~v~~v~~~p~~~~~l~~~-------~~dg~i~i~d~~~~~~~~~~~~~~~~~~~---~~h~~~v~~l~~sp~~~ 417 (502)
.+...+..++|+| + ..+.+. ..+..|++|+..++ ..+..+ ..+...+.+|+++|+|
T Consensus 236 ~~~~~~~~~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g---------~~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 236 HASFGRNVFAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSG---------EIIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp CTTTTTCEEEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTC---------CEEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ccccCCCcceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCC---------eEEEEEcCCCCccCCeeEEEECCCC-
Confidence 2345688899998 2 223322 23458999999876 555555 3566779999999998
Q ss_pred CEEEEEeCCCcEEEEECCC
Q 010769 418 NLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~ 436 (502)
.++++...++.|++|++..
T Consensus 304 ~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp EEEEEESSSCCEEEEEEEE
T ss_pred CEEEEECCCCEEEEEeCCc
Confidence 8999999999999999754
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.65 E-value=9e-14 Score=135.31 Aligned_cols=263 Identities=14% Similarity=0.147 Sum_probs=169.3
Q ss_pred cccccCCCceEEEEEec------CCcceeEEEEEecCCCCCCceeeeeccccC-------CCcceeeeecCCCCCCCCCC
Q 010769 144 DMTINPNDAVIVCARNE------DDVSHLEVYILEESDGGDPNLYVHHHIIIP-------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~------~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~-------~~~~~~~w~~~~~~~s~~~~ 210 (502)
.+.|+|++++|.++... +. ..-.|.+|+.... .+ .....++ ..|..+.+ +|+|+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~-~~~~v~v~d~~t~---~~--~~~i~~~~~~~~~g~~p~~i~~-------spdg~ 120 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGK-RSDVVEVWDADKL---TF--EKEISLPPKRVQGLNYDGLFRQ-------TTDGK 120 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSC-EEEEEEEEETTTC---CE--EEEEEECTTBCCBCCCGGGEEE-------CTTSS
T ss_pred ceEECCCCCEEEEEEecccccccCC-CCCEEEEEECcCC---cE--EEEEEcCccccccCCCcceEEE-------CCCCC
Confidence 78999999999988641 00 0114555555432 21 1112111 33445544 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+|+++.. ++.|.+||+.+...+. .+..+ .....+.+.|.+...+++.+.|
T Consensus 121 ~l~v~n~~~~~~v~v~d~~~~~~~~---------------------------~~i~~-~~~~~v~~~p~~~~~~~~~~~d 172 (361)
T 2oiz_A 121 FIVLQNASPATSIGIVDVAKGDYVE---------------------------DVTAA-AGCWSVIPQPNRPRSFMTICGD 172 (361)
T ss_dssp EEEEEEESSSEEEEEEETTTTEEEE---------------------------EEGGG-TTEEEEEECTTSSSEEEEEETT
T ss_pred EEEEECCCCCCeEEEEECCCCcEEE---------------------------EEecC-CCcceeEEcCCCCeeEEEECCC
Confidence 9999874 5799999997532111 00011 1123356778766788899999
Q ss_pred CcEEEEECCC-CeeeE------EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce-Ee----------
Q 010769 289 KQVKIWDVAA-GKCNL------TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WA---------- 350 (502)
Q Consensus 289 g~v~vwd~~~-~~~~~------~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~---------- 350 (502)
|.+.+|++.. ++... .+..+..++ .+.+++++ ..++..+.++.|.++|+......... +.
T Consensus 173 g~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~ 250 (361)
T 2oiz_A 173 GGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDK-DKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKN 250 (361)
T ss_dssp SSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECS-SEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTT
T ss_pred CcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccC-CEEEEEeCCCeEEEEEecCCCceecccccccCccccccc
Confidence 9999999865 55441 122222222 23345666 55666778899999999755432111 11
Q ss_pred -ecCCeEEEEeCCCCCCEEEEEe----------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCE
Q 010769 351 -VAADVESLAWDPHAEHSFVVSL----------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 351 -~~~~v~~v~~~p~~~~~l~~~~----------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.......++|+|++..++++.. ..+.|.+||+.+. +.+.++..+. +.+++|+|++ ++
T Consensus 251 ~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~---------~~v~~i~~~~--p~~ia~spdg-~~ 318 (361)
T 2oiz_A 251 WVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK---------QRVARIPGRD--ALSMTIDQQR-NL 318 (361)
T ss_dssp CEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT---------EEEEEEECTT--CCEEEEETTT-TE
T ss_pred cccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC---------cEEEEEecCC--eeEEEECCCC-CE
Confidence 0112223789998775444443 1358999999986 7778888777 8999999998 68
Q ss_pred EEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCC
Q 010769 420 LATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 420 l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
|++++. +.|.+||+.++++..+..+..+......++++|+|.
T Consensus 319 l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 319 MLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp EEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred EEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 887776 999999999984346666656667788999999985
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.65 E-value=4.5e-14 Score=149.95 Aligned_cols=284 Identities=9% Similarity=-0.016 Sum_probs=178.9
Q ss_pred cCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCC---CcceeeeecCCCCCCCCCCEEE-----EecCCC
Q 010769 148 NPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPA---FPLCMAWLDCPLKDREKGNFMA-----VGSMEP 219 (502)
Q Consensus 148 ~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~w~~~~~~~s~~~~~la-----~g~~dg 219 (502)
+|+|..++....++....-.+|..+...+....|. ..+..... ......| ||+|++|| .|+.+.
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~-d~~~~a~~~~~~~~~~~~-------SPDG~~la~~~~~~G~~~~ 147 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLL-DPNGWSKDGTVSLGTWAV-------SWDGKKVAFAQKPNAADEA 147 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEE-CGGGSSSSSCEEEEEEEE-------CTTSSEEEEEEEETTCSCC
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEE-chHHhccCCCEEEEEEEE-------CCCCCEEEEEECCCCCceE
Confidence 48899888888766433457888775433111221 11110000 0123333 89999999 455557
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccc--eeeEEecCCCCcEEEEEecCCc-------
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS--VLGLAWNKEFRNILASASADKQ------- 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~--V~~l~~~~~~~~~l~sgs~Dg~------- 290 (502)
.|++||+.++..+.. .+... ...++|+|++ ..|+.++.+..
T Consensus 148 ~i~v~dl~tg~~~~~-----------------------------~~~~~~~~~~~~wspDg-~~l~~~~~d~~~~~~~~~ 197 (695)
T 2bkl_A 148 VLHVIDVDSGEWSKV-----------------------------DVIEGGKYATPKWTPDS-KGFYYEWLPTDPSIKVDE 197 (695)
T ss_dssp EEEEEETTTCCBCSS-----------------------------CCBSCCTTCCCEECTTS-SEEEEEECCCCTTSCGGG
T ss_pred EEEEEECCCCCCcCC-----------------------------cccCcccccceEEecCC-CEEEEEEecCCCCCcccc
Confidence 899999986543210 01111 2678999995 57888887766
Q ss_pred ------EEEEECCCCe----eeEEeccCCCCeEEEEEcCCCCcEEEEEECCC----cEEEEeCCCCCCccceEeecCCeE
Q 010769 291 ------VKIWDVAAGK----CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTHSGFKWAVAADVE 356 (502)
Q Consensus 291 ------v~vwd~~~~~----~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~~~~~~~~~~~v~ 356 (502)
|++|++.+++ ++.....|...+.++.|+|+| ++|+.++.++ .|.+|+..++.. .........+.
T Consensus 198 ~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~ 275 (695)
T 2bkl_A 198 RPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKY 275 (695)
T ss_dssp GGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCE
T ss_pred CCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCceE
Confidence 9999998876 333334466788999999999 5566555444 566666544432 22344455566
Q ss_pred EEEeCCCCCCEEEEEe---CCCeEEEEECCCCCCCCCCCCCCccEEEecC--CCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010769 357 SLAWDPHAEHSFVVSL---EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 357 ~v~~~p~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
...| +++. +++.+. .++.|.+||+.++.. .....+..| ...+..++|+ .+ .++++...++..+|
T Consensus 276 ~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~-------~~~~~l~~~~~~~~l~~~~~~-~~-~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 276 EVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPAR-------ASWKEIVPEDSSASLLSVSIV-GG-HLSLEYLKDATSEV 344 (695)
T ss_dssp EEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSG-------GGCEEEECCCSSCEEEEEEEE-TT-EEEEEEEETTEEEE
T ss_pred EEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCc-------cCCeEEecCCCCCeEEEEEEE-CC-EEEEEEEECCEEEE
Confidence 6667 5566 555554 358899999876510 112344333 4457888888 34 78889999998888
Q ss_pred EECC-CCCeeEEEEecCC-CCCEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCcc
Q 010769 432 WDLS-NNQPSCIASRNPK-AGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDAG 484 (502)
Q Consensus 432 wd~~-~~~~~~~~~~~~~-~~~v~~~~~spd~~~llasg~~---dg~i~vwd~~~~~~ 484 (502)
|.+. .++ ....+..+ .+.+..++++|++..++++.++ .++|++||+.+++.
T Consensus 345 ~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 345 RVATLKGK--PVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp EEEETTCC--EEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEeCCCC--eeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 7654 233 23344433 5678889999999765544443 36799999988763
No 178
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.64 E-value=8.5e-14 Score=134.52 Aligned_cols=264 Identities=12% Similarity=0.095 Sum_probs=164.9
Q ss_pred cccccccccCCCceEEEEEecC----CcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEe
Q 010769 140 EDLEDMTINPNDAVIVCARNED----DVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g 215 (502)
..+..+++ +|+.|+...... +...-.||+++.... ..... ....+..| ||+|++||.+
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~---~~~~l------~~~~~~~~-------SpDg~~la~~ 76 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNN---ARRFI------ENATMPRI-------SPDGKKIAFM 76 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTC---CEEEE------ESCEEEEE-------CTTSSEEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCC---ceEEc------ccCCCeEE-------CCCCCEEEEE
Confidence 45667777 888887764321 112347888876654 21111 22244555 8999999987
Q ss_pred cCC---C--cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec---
Q 010769 216 SME---P--AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--- 287 (502)
Q Consensus 216 ~~d---g--~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--- 287 (502)
+.+ + .|.+|++..+... .+..+.. +.+++|+|++. .|+.++.
T Consensus 77 ~~~~~~~~~~l~~~~~~~g~~~----------------------------~l~~~~~-~~~~~wspdg~-~l~~~~~~~~ 126 (347)
T 2gop_A 77 RANEEKKVSEIWVADLETLSSK----------------------------KILEAKN-IRSLEWNEDSR-KLLIVGFKRR 126 (347)
T ss_dssp EEETTTTEEEEEEEETTTTEEE----------------------------EEEEESE-EEEEEECTTSS-EEEEEEECCC
T ss_pred EeccCCCcceEEEEECCCCceE----------------------------EEEcCCC-ccceeECCCCC-EEEEEEccCC
Confidence 654 3 3777777542110 0111223 89999999954 6666553
Q ss_pred ------------------------CCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCC-------cEEE
Q 010769 288 ------------------------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR-------SVVM 336 (502)
Q Consensus 288 ------------------------Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg-------~i~v 336 (502)
...|.+||+.+++.+..+.. . .+..+.|+|++ +++++..++ ...|
T Consensus 127 ~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l 202 (347)
T 2gop_A 127 EDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDI 202 (347)
T ss_dssp C---------CCCC---------CEEEEEEEETTTTEEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEE
T ss_pred CcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccccE
Confidence 25799999998887455554 3 78899999998 666666542 3445
Q ss_pred EeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeC-------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 337 KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE-------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 337 wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
|.+.++. ....... ..+..+ +|++..+++++.. ...|.+|| ++ ........|...+..
T Consensus 203 ~~~d~~~-~~~l~~~-~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~---------~~~~l~~~~~~~~~~ 267 (347)
T 2gop_A 203 YIWEDGK-EEKMFEK-VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GK---------EVMGILDEVDRGVGQ 267 (347)
T ss_dssp EEEETTE-EEEEEEE-ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SS---------CEEESSTTCCSEEEE
T ss_pred EEeCCCc-eEEeccC-cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CC---------ceEeccccCCcccCC
Confidence 5444333 2222333 444443 8988755455433 24688888 32 222223445677876
Q ss_pred -EEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcE-EEEECC
Q 010769 410 -ISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKL-EIWDTL 480 (502)
Q Consensus 410 -l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i-~vwd~~ 480 (502)
+.|+ ++ ++++++.++.++|| +.+++. ..+..+.+.|.+++|+| . ++++++.++.. .||.+.
T Consensus 268 ~~~~s-dg--~~~~~~~~~~~~l~-~~~g~~---~~~~~~~~~v~~~~~s~--~-~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 268 AKIKD-GK--VYFTLFEEGSVNLY-IWDGEI---KPIAKGRHWIMGFDVDE--I-VVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEET-TE--EEEEEEETTEEEEE-EESSSE---EEEECSSSEEEEEEESS--S-EEEEEECSSSCCEEEEES
T ss_pred ccEEc-Cc--EEEEEecCCcEEEE-EcCCce---EEEecCCCeEEeeeeeC--c-EEEEEcCCCChHHheEeC
Confidence 8998 64 88889999999999 875543 22333467899999999 4 56777777654 777776
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=5.7e-15 Score=145.31 Aligned_cols=234 Identities=9% Similarity=0.014 Sum_probs=150.2
Q ss_pred CCCCCCCCEEEEecCC---CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCC
Q 010769 203 LKDREKGNFMAVGSME---PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFR 279 (502)
Q Consensus 203 ~~~s~~~~~la~g~~d---g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~ 279 (502)
++|+|+|++||..... ..|.+|++..+... ....++......+.|+|+ +
T Consensus 41 ~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~---------------------------~l~~~~~~~~~~~~~spd-g 92 (396)
T 3c5m_A 41 KCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAV---------------------------QLTEGKGDNTFGGFISTD-E 92 (396)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTTEEE---------------------------ECCCSSCBCTTTCEECTT-S
T ss_pred CcCCCCCCEEEEEEecCCCceEEEEECCCCcEE---------------------------EeecCCCCccccceECCC-C
Confidence 3448999998877543 36778887643210 011122223344789999 5
Q ss_pred cEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEE-------------------EEEcCCCCcEEEEE-----ECCCcEE
Q 010769 280 NILASASADKQVKIWDVAAGKCNLTLEHHTDKVQA-------------------VAWNHHSPQILLSG-----SFDRSVV 335 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~-------------------l~~~~~~~~~l~s~-----~~dg~i~ 335 (502)
..|+.++.++.|++|++.+++....+..+...... +.|+|++ ..++.+ ..+..|.
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEE
Confidence 58888888889999999988766555544443222 3467776 333332 4567899
Q ss_pred EEeCCCCCCccceEeecCCeEEEEeCC-CCCCEEEEEeCC------CeEEEEECCCCCCCCCCCCCCccEEEecC--CCC
Q 010769 336 MKDARISTHSGFKWAVAADVESLAWDP-HAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH--DKA 406 (502)
Q Consensus 336 vwd~~~~~~~~~~~~~~~~v~~v~~~p-~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~h--~~~ 406 (502)
+||+.++.... .......+..+.|+| ++. .++..+.+ ..|.+|++... ....+..+ ...
T Consensus 172 ~~d~~~g~~~~-~~~~~~~~~~~~~sp~dg~-~l~~~~~~~~~~~~~~l~~~d~~~~----------~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 172 KVDIETGELEV-IHQDTAWLGHPIYRPFDDS-TVGFCHEGPHDLVDARMWLVNEDGS----------NVRKIKEHAEGES 239 (396)
T ss_dssp EEETTTCCEEE-EEEESSCEEEEEEETTEEE-EEEEEECSCSSSCSCCCEEEETTSC----------CCEESSCCCTTEE
T ss_pred EEECCCCcEEe-eccCCcccccceECCCCCC-EEEEEecCCCCCCCceEEEEECCCC----------ceeEeeccCCCcc
Confidence 99998766543 345667789999999 565 34443333 36888888654 12222222 235
Q ss_pred eeEEEEcCCCCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcC-CCCcEEEEEe-----------
Q 010769 407 VCTISYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE-DSPFVLAIGG----------- 469 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~sp-d~~~llasg~----------- 469 (502)
+..++|+|++ +.|+.++.+ +.|++||+.+++...+..... .. +.|+| ++++ |++++
T Consensus 240 ~~~~~~spdg-~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~----~~-~~~s~~dg~~-l~~~~~~~p~~~~~~~ 312 (396)
T 3c5m_A 240 CTHEFWIPDG-SAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPP----CS-HLMSNFDGSL-MVGDGCDAPVDVADAD 312 (396)
T ss_dssp EEEEEECTTS-SCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCS----EE-EEEECSSSSE-EEEEECCC--------
T ss_pred ccceEECCCC-CEEEEEecCCCCccceEEEEECCCCCeEEeeeCCC----CC-CCccCCCCce-EEEecCCcceeecccc
Confidence 7889999998 555554433 449999999887544443322 33 89999 9994 55544
Q ss_pred -----CCCcEEEEECCCCcc
Q 010769 470 -----SKGKLEIWDTLSDAG 484 (502)
Q Consensus 470 -----~dg~i~vwd~~~~~~ 484 (502)
.++.|++||+.++..
T Consensus 313 ~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 313 SYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp --CCCCCCEEEEEETTTTBC
T ss_pred ccccCCCCcEEEEecccCce
Confidence 346899999987764
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.63 E-value=2.4e-12 Score=121.19 Aligned_cols=281 Identities=10% Similarity=0.085 Sum_probs=183.7
Q ss_pred ccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC
Q 010769 139 SEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 139 ~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d 218 (502)
...+.++.+.|+|+++++....+ .|+.|+.. . .+...........|.++.+ +++|+++++...+
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~~~-----~v~~~d~~-~---~~~~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~ 77 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHKAN-----MISCINLD-G---KITEYPLPTPDAKVMCLTI-------SSDGEVWFTENAA 77 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETTTT-----EEEEECTT-C---CEEEEECSSTTCCEEEEEE-------CTTSCEEEEETTT
T ss_pred CCCccceEECCCCCEEEEecCCC-----cEEEEcCC-C---CeEEecCCcccCceeeEEE-------CCCCCEEEeCCCC
Confidence 35688999999999887765444 67777655 3 2222111111234455544 6788888887778
Q ss_pred CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCC
Q 010769 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA 298 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~ 298 (502)
+.|..|+... . ... .....+...+.++++.++ +.++++...++.|.+||. +
T Consensus 78 ~~i~~~~~~g-~-~~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~d~-~ 128 (299)
T 2z2n_A 78 NKIGRITKKG-I-IKE-------------------------YTLPNPDSAPYGITEGPN-GDIWFTEMNGNRIGRITD-D 128 (299)
T ss_dssp TEEEEECTTS-C-EEE-------------------------EECSSTTCCEEEEEECTT-SCEEEEETTTTEEEEECT-T
T ss_pred CeEEEECCCC-c-EEE-------------------------EeCCCcCCCceeeEECCC-CCEEEEecCCceEEEECC-C
Confidence 8899998751 1 100 001123456889999998 457777767889999998 5
Q ss_pred CeeeE-EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCCCCCEEEEEeCCCe
Q 010769 299 GKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGT 376 (502)
Q Consensus 299 ~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~dg~ 376 (502)
++... .+..+...+.++++.+++ .++++...++.|..|+. ++....... .....+..+++++++. ++++....+.
T Consensus 129 g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~ 205 (299)
T 2z2n_A 129 GKIREYELPNKGSYPSFITLGSDN-ALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA-LWFVEIIGNK 205 (299)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS-EEEEETTTTE
T ss_pred CCEEEecCCCCCCCCceEEEcCCC-CEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC-EEEEccCCce
Confidence 54433 223345678999999998 77777767789999998 444322111 1234578999999765 5666666889
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEE
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
|.+|+. ++. ........+...+.++++.+++ .++++...++.|.+||. +++. .......+...+.+++
T Consensus 206 i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i~ 273 (299)
T 2z2n_A 206 IGRITT-SGE--------ITEFKIPTPNARPHAITAGAGI-DLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGIC 273 (299)
T ss_dssp EEEECT-TCC--------EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEEE
T ss_pred EEEECC-CCc--------EEEEECCCCCCCceeEEECCCC-CEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceEE
Confidence 999998 541 1122233455678999999987 66666667789999998 3432 2233344456799999
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 457 FSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 457 ~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
+ +++. ++++. ..+.|..++..++
T Consensus 274 ~-~~g~-l~v~~-~~~~l~~~~~~~~ 296 (299)
T 2z2n_A 274 F-DGET-IWFAM-ECDKIGKLTLIKD 296 (299)
T ss_dssp E-CSSC-EEEEE-TTTEEEEEEEC--
T ss_pred e-cCCC-EEEEe-cCCcEEEEEcCcc
Confidence 9 8887 45543 3567888887664
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=6.7e-13 Score=124.58 Aligned_cols=242 Identities=12% Similarity=0.130 Sum_probs=160.9
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeecc----ccCCCcceeeeecCCCCCCCCCCEEE
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHI----IIPAFPLCMAWLDCPLKDREKGNFMA 213 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~----~~~~~~~~~~w~~~~~~~s~~~~~la 213 (502)
+-....+++++|+++++++...++ .|+.|+.... .+...... .....|.++++. .+++++++
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~-----~i~~~d~~g~---~~~~~~~~~~~~~~~~~p~~i~~~------~~~g~l~v 93 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNH-----RIQIFDKEGR---FKFQFGECGKRDSQLLYPNRVAVV------RNSGDIIV 93 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGT-----EEEEECTTSC---EEEEECCBSSSTTCBSSEEEEEEE------TTTTEEEE
T ss_pred ccCCCceEEECCCCCEEEEECCCC-----EEEEECCCCc---EEEEecccCCCcccccCceEEEEE------cCCCeEEE
Confidence 345678899999999888877665 6777765432 22111100 001234454442 35677777
Q ss_pred EecC-CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEE
Q 010769 214 VGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVK 292 (502)
Q Consensus 214 ~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~ 292 (502)
+... ++.|++|+.+. ..+. . ....+...+.+|++.+++ +++++.+.++.|.
T Consensus 94 ~~~~~~~~i~~~d~~g-~~~~---~-----------------------~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~ 145 (286)
T 1q7f_A 94 TERSPTHQIQIYNQYG-QFVR---K-----------------------FGATILQHPRGVTVDNKG-RIIVVECKVMRVI 145 (286)
T ss_dssp EECGGGCEEEEECTTS-CEEE---E-----------------------ECTTTCSCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred EcCCCCCEEEEECCCC-cEEE---E-----------------------ecCccCCCceEEEEeCCC-CEEEEECCCCEEE
Confidence 6643 78999999432 1110 0 011244568999999984 5777777889999
Q ss_pred EEECCCCeeeEEec--cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec---CCeEEEEeCCCCCCE
Q 010769 293 IWDVAAGKCNLTLE--HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA---ADVESLAWDPHAEHS 367 (502)
Q Consensus 293 vwd~~~~~~~~~~~--~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~---~~v~~v~~~p~~~~~ 367 (502)
+|+.. ++.+..+. .+...+.++++++++ +++++...++.|++|+.... ... ..... ..+..+++++++. +
T Consensus 146 ~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~-~~~-~~~~~g~~~~p~~i~~d~~G~-l 220 (286)
T 1q7f_A 146 IFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQ-EIFISDNRAHCVKVFNYEGQ-YLR-QIGGEGITNYPIGVGINSNGE-I 220 (286)
T ss_dssp EECTT-SCEEEEEECTTTCSSEEEEEECSSS-EEEEEEGGGTEEEEEETTCC-EEE-EESCTTTSCSEEEEEECTTCC-E
T ss_pred EEcCC-CCEEEEeCCCCccCCcEEEEECCCC-CEEEEECCCCEEEEEcCCCC-EEE-EEccCCccCCCcEEEECCCCC-E
Confidence 99964 56565553 345678999999998 77777778999999997542 221 22222 4688999999874 6
Q ss_pred EEEEeCCC-eEEEEECCCCCCCCCCCCCCccEEEecCC--CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 368 FVVSLEDG-TIKGFDIRTAKSDPDSTSQQSSFTLHAHD--KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 368 l~~~~~dg-~i~i~d~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
+++...++ .|.+|+... ..+..+..+. ..+.+++++|++ .++++ +.++.|++|++....
T Consensus 221 ~v~~~~~~~~i~~~~~~g----------~~~~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 221 LIADNHNNFNLTIFTQDG----------QLISALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp EEEECSSSCEEEEECTTS----------CEEEEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCCC
T ss_pred EEEeCCCCEEEEEECCCC----------CEEEEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEccccc
Confidence 77776675 999999542 4455555443 347799999988 66666 579999999986644
No 182
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.60 E-value=5.3e-13 Score=136.84 Aligned_cols=311 Identities=10% Similarity=0.040 Sum_probs=197.7
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCC----CCCCEEEEec
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDR----EKGNFMAVGS 216 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s----~~~~~la~g~ 216 (502)
.+..+.|+|++++|.+++.++ .|++|+.... .+.....+.....|..+.+ + |+|+++++++
T Consensus 198 ~p~~v~~SpDGr~lyv~~~dg-----~V~viD~~~~---t~~~v~~i~~G~~P~~ia~-------s~~~~pDGk~l~v~n 262 (567)
T 1qks_A 198 AVHISRLSASGRYLFVIGRDG-----KVNMIDLWMK---EPTTVAEIKIGSEARSIET-------SKMEGWEDKYAIAGA 262 (567)
T ss_dssp CEEEEEECTTSCEEEEEETTS-----EEEEEETTSS---SCCEEEEEECCSEEEEEEE-------CCSTTCTTTEEEEEE
T ss_pred CccceEECCCCCEEEEEcCCC-----eEEEEECCCC---CCcEeEEEecCCCCceeEE-------ccccCCCCCEEEEEE
Confidence 345789999999999987655 6777776311 1112233344444555555 6 6999988876
Q ss_pred CC-CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccc-ceeeEEecCCCCcEEEEEecCCcEEEE
Q 010769 217 ME-PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTD-SVLGLAWNKEFRNILASASADKQVKIW 294 (502)
Q Consensus 217 ~d-g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~-~V~~l~~~~~~~~~l~sgs~Dg~v~vw 294 (502)
.. +.|.|+|..+.+.+....+.+. .......|.. .+..+..++++..++++....|.|.++
T Consensus 263 ~~~~~v~ViD~~t~~~~~~i~~~~~-----------------~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~v 325 (567)
T 1qks_A 263 YWPPQYVIMDGETLEPKKIQSTRGM-----------------TYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLV 325 (567)
T ss_dssp EETTEEEEEETTTCCEEEEEECCEE-----------------CTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEE
T ss_pred ccCCeEEEEECCCCcEEEEEecccc-----------------ccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEE
Confidence 55 8999999876544332221110 0000011333 677888888877677777788999999
Q ss_pred ECCCCee--eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee-c---CCeEEEE-eCCCCCCE
Q 010769 295 DVAAGKC--NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-A---ADVESLA-WDPHAEHS 367 (502)
Q Consensus 295 d~~~~~~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-~---~~v~~v~-~~p~~~~~ 367 (502)
|....+. +..+. .......+.|+|++..++++...++.|.++|+.+.+..... .. . .+-..+. ++|++..+
T Consensus 326 d~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i-~vgg~~Phpg~g~~~~~p~~g~v 403 (567)
T 1qks_A 326 DYTDLNNLKTTEIS-AERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIE-DTGGQTPHPGRGANFVHPTFGPV 403 (567)
T ss_dssp ETTCSSEEEEEEEE-CCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE-ECSSSSBCCTTCEEEEETTTEEE
T ss_pred ecCCCccceeeeee-ccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEE-eccCcCCCCccceeeECCCCCcE
Confidence 9887542 22332 34567789999999545555657899999999987654322 22 1 1101222 57765545
Q ss_pred EEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC-------CCcEEEEECCCC--
Q 010769 368 FVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-------DKMVKLWDLSNN-- 437 (502)
Q Consensus 368 l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~-------dg~i~vwd~~~~-- 437 (502)
++++. .++.|.++|..+..... ...+.+.++......-..+.++|++ ++|.+... .++|.|+|+.+.
T Consensus 404 ~~t~~~g~~~Vsvid~~~~~~~~--~~~kvv~~i~~~g~g~~~i~~~p~~-~~l~v~~~~~~~~~~~~~v~v~d~~~~~~ 480 (567)
T 1qks_A 404 WATSHMGDDSVALIGTDPEGHPD--NAWKILDSFPALGGGSLFIKTHPNS-QYLYVDATLNPEAEISGSVAVFDIKAMTG 480 (567)
T ss_dssp EEEEBSSSSEEEEEECCTTTCTT--TBTSEEEEEECSCSCCCCEECCTTC-SEEEEECTTCSSHHHHTCEEEEEGGGCCC
T ss_pred EEeCCCCCCeEEEecCCCCCCcc--ccCEEEEEEecCCCCCEEEEeCCCC-CeEEEecCCCCCcccCceEEEEECCcccc
Confidence 55554 56899999998732110 0025566666554444568899998 66666542 358999999876
Q ss_pred ---CeeEEEEec--------CCCCCEEEEEEcCCCCcEEEEEe----CCCcEEEEECCCCccccccc
Q 010769 438 ---QPSCIASRN--------PKAGAVFSVAFSEDSPFVLAIGG----SKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 438 ---~~~~~~~~~--------~~~~~v~~~~~spd~~~llasg~----~dg~i~vwd~~~~~~~~~~~ 489 (502)
.. ....+. .....+..+.|+|+|.+++++.. .++.|.|+|..+.+.+.++-
T Consensus 481 ~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i~ 546 (567)
T 1qks_A 481 DGSDP-EFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLELKHVIK 546 (567)
T ss_dssp SSSCC-CEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTEEEEEEC
T ss_pred cccCC-CcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCceEEEEeC
Confidence 21 111221 12357899999999998777754 36899999999998776554
No 183
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.58 E-value=5.5e-14 Score=148.42 Aligned_cols=249 Identities=10% Similarity=-0.031 Sum_probs=151.0
Q ss_pred ccccc--CCCce-EEEEEecCCcceeEEEEEecC--C-CCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 144 DMTIN--PNDAV-IVCARNEDDVSHLEVYILEES--D-GGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 144 ~~~~~--p~~~~-l~~~~~~~~~~~l~v~~~~~~--~-~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
.+.|+ |+|+. |+.+... ..+||.++.. . .....+.............++.| +|+|++|++++.
T Consensus 81 ~~~~~~SPDg~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~-------spDg~~l~~~~~ 149 (662)
T 3azo_A 81 PWAGVPRPAGGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVL-------LPERGEVWCMAE 149 (662)
T ss_dssp CEEEECCSSSSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEE-------ETTTTEEEEEEE
T ss_pred cceeeeecCCCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEE-------CCCCCEEEEEEe
Confidence 44454 99998 7766533 2478988865 2 21111211100000111234555 899999999887
Q ss_pred C----------CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccC-CcccceeeEEecCCCCcEEEEEe
Q 010769 218 E----------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG-SHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 218 d----------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+ ..|++|++....... ......+. .+...+..++|+|++ .+|+.++
T Consensus 150 ~~~~~~~~~~~~~i~~~~~~~~~~~~----------------------~~~~~~l~~~~~~~~~~~~~SpDG-~~la~~~ 206 (662)
T 3azo_A 150 EFTGEGPSDVRRFLAAVPLDGSAAAD----------------------RSAVRELSDDAHRFVTGPRLSPDG-RQAVWLA 206 (662)
T ss_dssp EECSSSTTCEEEEEEEEETTSTTTTC----------------------GGGSEESSCSCSSEECCCEECTTS-SEEEEEE
T ss_pred cccCCCCCCceeEEEEEECCCCcccc----------------------CCceeEEEecCCCcccCceECCCC-CEEEEEE
Confidence 6 589999986410000 00011122 345678899999995 5777776
Q ss_pred cC--------CcEEEEECC-CC---eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCC--cEEEEeCCCCCCccceEeec
Q 010769 287 AD--------KQVKIWDVA-AG---KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVA 352 (502)
Q Consensus 287 ~D--------g~v~vwd~~-~~---~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~ 352 (502)
.+ ..|++||+. ++ +......+|...+..+.|+|+| ++++++..++ .|.+|++.++........+.
T Consensus 207 ~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg-~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~ 285 (662)
T 3azo_A 207 WDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDG-SLIVATDRTGWWNLHRVDPATGAATQLCRREE 285 (662)
T ss_dssp ECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTS-CEEEEECTTSSCEEEEECTTTCCEEESSCCSS
T ss_pred CCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCC-eEEEEECCCCCeEEEEEECCCCceeecccccc
Confidence 55 379999999 57 4444445567889999999999 5888888888 56666665544322111111
Q ss_pred C--------CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEE-EEcCCCCCEEEE-
Q 010769 353 A--------DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI-SYNPLVPNLLAT- 422 (502)
Q Consensus 353 ~--------~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l-~~sp~~~~~l~t- 422 (502)
. .+.+++|+|++. +++++.. +.+++|.+... ...+..+..|...+..+ ++++ ..++++
T Consensus 286 ~~~~p~w~~~~~~~~~~~~~~-~~~~~~~-~~~~l~~~d~~--------~~~~~~l~~~~~~~~~~~s~~~--~~~~~~~ 353 (662)
T 3azo_A 286 EFAGPLWTPGMRWFAPLANGL-IAVVHGK-GAAVLGILDPE--------SGELVDAAGPWTEWAATLTVSG--TRAVGVA 353 (662)
T ss_dssp BSSCCCCSTTCCSEEECTTSC-EEEEEBS-SSCEEEEEETT--------TTEEEECCSSCCEEEEEEEEET--TEEEEEE
T ss_pred cccCccccccCceEeEeCCCE-EEEEEEc-CccEEEEEECC--------CCcEEEecCCCCeEEEEEecCC--CEEEEEE
Confidence 1 146788888765 7888888 99999944322 12356667777777777 5544 344444
Q ss_pred EeCCC--cEEEEECCCCCe
Q 010769 423 GSTDK--MVKLWDLSNNQP 439 (502)
Q Consensus 423 ~s~dg--~i~vwd~~~~~~ 439 (502)
++.+. .|.+||+.+++.
T Consensus 354 ~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 354 ASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EETTEEEEEEEEETTTCCE
T ss_pred cCCCCCCEEEEEECCCCce
Confidence 44443 466667777764
No 184
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.57 E-value=4.3e-13 Score=126.67 Aligned_cols=227 Identities=10% Similarity=0.057 Sum_probs=153.8
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+++ +++++..++.|.+|+.... .. .+..+...+.+++++++ +.++++
T Consensus 36 d~~g~~l~~~~~~~~~i~~~~~~~~--~~---------------------------~~~~~~~~~~~l~~~~d-g~l~v~ 85 (296)
T 3e5z_A 36 VPARSAVIFSDVRQNRTWAWSDDGQ--LS---------------------------PEMHPSHHQNGHCLNKQ-GHLIAC 85 (296)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTSC--EE---------------------------EEESSCSSEEEEEECTT-CCEEEE
T ss_pred eCCCCEEEEEeCCCCEEEEEECCCC--eE---------------------------EEECCCCCcceeeECCC-CcEEEE
Confidence 68888 7888888999999998742 11 11235567899999999 457777
Q ss_pred EecCCcEEEEECCCCeeeEEeccC----CCCeEEEEEcCCCCcEEEEE----E-------------CCCcEEEEeCCCCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSG----S-------------FDRSVVMKDARIST 343 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~----~-------------~dg~i~vwd~~~~~ 343 (502)
...++.|.+||..+++........ ...+..++++|+| +++++. + ..+.|..++.. +
T Consensus 86 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g- 162 (296)
T 3e5z_A 86 SHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G- 162 (296)
T ss_dssp ETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S-
T ss_pred ecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-C-
Confidence 766789999999888754433221 2356789999999 777763 2 13455555554 2
Q ss_pred CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCc---cEEEecCCCCeeEEEEcCCCCCEE
Q 010769 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS---SFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
..............++|+|++.. +++.+.++.|.+|++... ... ...+..+...+.+++++++| +++
T Consensus 163 ~~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~--------g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~ 232 (296)
T 3e5z_A 163 TLSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNAR--------GETEYQGVHFTVEPGKTDGLRVDAGG-LIW 232 (296)
T ss_dssp CEEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSS--------SCEEEEEEEECCSSSCCCSEEEBTTS-CEE
T ss_pred CEEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCC--------CcCcCCCeEeeCCCCCCCeEEECCCC-CEE
Confidence 22223344556789999999874 477788899999999732 122 12223355667899999998 665
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEE-cCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF-SEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~-spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++. ++.|.+|+.. ++ .+..+..+.. +.+++| .|++.. |.+++.+ .+.-+++.+..
T Consensus 233 v~~--~~~v~~~~~~-g~--~~~~~~~~~~-~~~~~f~~~d~~~-L~v~t~~-~l~~~~~~~~~ 288 (296)
T 3e5z_A 233 ASA--GDGVHVLTPD-GD--ELGRVLTPQT-TSNLCFGGPEGRT-LYMTVST-EFWSIETNVRG 288 (296)
T ss_dssp EEE--TTEEEEECTT-SC--EEEEEECSSC-CCEEEEESTTSCE-EEEEETT-EEEEEECSCCB
T ss_pred EEc--CCeEEEECCC-CC--EEEEEECCCC-ceeEEEECCCCCE-EEEEcCC-eEEEEEccccc
Confidence 555 7889999986 44 3444555555 889999 688885 5555555 45556665544
No 185
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.56 E-value=2.8e-12 Score=121.87 Aligned_cols=248 Identities=10% Similarity=0.079 Sum_probs=161.8
Q ss_pred cceeeeecCCCCCCCCCCEEEE-------ecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCc
Q 010769 193 PLCMAWLDCPLKDREKGNFMAV-------GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSH 265 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~-------g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h 265 (502)
|.++.| +++++++++ ++.++.|.+|+....... ... .....++
T Consensus 20 ~~~~~~-------~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~----------------------~~~~~~~ 69 (314)
T 1pjx_A 20 AEGPVF-------DKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VIC----------------------KPEVNGY 69 (314)
T ss_dssp CEEEEE-------CTTSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEE----------------------CCEETTE
T ss_pred ccCceE-------CCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEE----------------------ecccCCC
Confidence 456666 678888888 677899999997643211 000 0001134
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEE-ecc----CCCCeEEEEEcCCCCcEEEEEECC---------
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT-LEH----HTDKVQAVAWNHHSPQILLSGSFD--------- 331 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~-~~~----h~~~v~~l~~~~~~~~~l~s~~~d--------- 331 (502)
...+.++++.++++++++ ++..+.|.+||.. ++.... ... ....+.++++.+++ +++++...+
T Consensus 70 ~~~~~~i~~~~~~g~l~v-~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 70 GGIPAGCQCDRDANQLFV-ADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTR 146 (314)
T ss_dssp ECCEEEEEECSSSSEEEE-EETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCB
T ss_pred CCCCceEEEecCCCcEEE-EECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccc
Confidence 567899999998333444 4444579999988 765433 221 12358899999998 766666544
Q ss_pred ------CcEEEEeCCCCCCccceEeecCCeEEEEeC----CCCCCEEEEEeCCCeEEEEECC-CCCCCCCCCCCCccEEE
Q 010769 332 ------RSVVMKDARISTHSGFKWAVAADVESLAWD----PHAEHSFVVSLEDGTIKGFDIR-TAKSDPDSTSQQSSFTL 400 (502)
Q Consensus 332 ------g~i~vwd~~~~~~~~~~~~~~~~v~~v~~~----p~~~~~l~~~~~dg~i~i~d~~-~~~~~~~~~~~~~~~~~ 400 (502)
+.|..|+.. ++. ............++|+ |++..++++...++.|.+|++. .+.... ......+
T Consensus 147 ~~~~~~~~l~~~~~~-g~~-~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~----~~~~~~~ 220 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQM-IQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIEN----KKVWGHI 220 (314)
T ss_dssp TTSSSCEEEEEECTT-SCE-EEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEE----EEEEEEC
T ss_pred cccCCCCeEEEECCC-CCE-EEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCcccc----ceEEEEC
Confidence 567777765 332 2233344567889999 9876455555678999999976 221000 0112223
Q ss_pred ecCC-CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 401 HAHD-KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 401 ~~h~-~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
..+. ..+..++++++| +++++...++.|.+||..+++... .+..+...+.+++|+|++.+++++...++.|..|++
T Consensus 221 ~~~~~~~p~~i~~d~~G-~l~v~~~~~~~i~~~d~~~g~~~~--~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~ 297 (314)
T 1pjx_A 221 PGTHEGGADGMDFDEDN-NLLVANWGSSHIEVFGPDGGQPKM--RIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp CCCSSCEEEEEEEBTTC-CEEEEEETTTEEEEECTTCBSCSE--EEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred CCCCCCCCCceEECCCC-CEEEEEcCCCEEEEEcCCCCcEeE--EEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeC
Confidence 3333 567889999988 788887788899999998665322 233445679999999999866666666789999998
Q ss_pred CCC
Q 010769 480 LSD 482 (502)
Q Consensus 480 ~~~ 482 (502)
...
T Consensus 298 ~~~ 300 (314)
T 1pjx_A 298 QRN 300 (314)
T ss_dssp SSC
T ss_pred CCC
Confidence 754
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.55 E-value=9.4e-13 Score=126.46 Aligned_cols=236 Identities=8% Similarity=0.035 Sum_probs=158.8
Q ss_pred CCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 205 DREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 205 ~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
|++++..++..+.++.++.|.-. ....+..+...+.+++|+++ +.++++
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~------------------------------~~~~~~~~~~~~~~~~~~~~-g~l~~~ 61 (333)
T 2dg1_A 13 YSGKSNSAVPIISESELQTITAE------------------------------PWLEISKKGLQLEGLNFDRQ-GQLFLL 61 (333)
T ss_dssp SCGGGGCSSCCCCGGGSCEEECE------------------------------EEEEEESSCCCEEEEEECTT-SCEEEE
T ss_pred ecCCccceeEEeecccCcccccc------------------------------eeEEEeccCccccCcEECCC-CCEEEE
Confidence 36777777777778888888321 11112245566789999998 457778
Q ss_pred EecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC----CcEEEEeCCCCCCccceE--eecCCeEEE
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGFKW--AVAADVESL 358 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~~~--~~~~~v~~v 358 (502)
+..++.|.+||..+++....+..+...+.+++|++++ +++++...+ +.|.+||..+........ .....+..+
T Consensus 62 ~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i 140 (333)
T 2dg1_A 62 DVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDM 140 (333)
T ss_dssp ETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEE
T ss_pred ECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccce
Confidence 8889999999998887665444566789999999998 777776666 689999988765432111 123468899
Q ss_pred EeCCCCCCEEEEEeC------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEE
Q 010769 359 AWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLW 432 (502)
Q Consensus 359 ~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vw 432 (502)
+++|++. ++++... .+.|..|+..+. .+..+..+...+.+++|+|++..++++.+.++.|.+|
T Consensus 141 ~~d~~g~-l~v~~~~~~~~~~~~~l~~~~~~~~----------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~ 209 (333)
T 2dg1_A 141 VFDSKGG-FYFTDFRGYSTNPLGGVYYVSPDFR----------TVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRI 209 (333)
T ss_dssp EECTTSC-EEEEECCCBTTBCCEEEEEECTTSC----------CEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEE
T ss_pred EECCCCC-EEEEeccccccCCCceEEEEeCCCC----------EEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEE
Confidence 9999875 4554432 356666665543 1222323334578999999983355566668899999
Q ss_pred ECCC-CCeeE------EEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 433 DLSN-NQPSC------IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 433 d~~~-~~~~~------~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
++.. +.... ......+ ..+..++++++|. ++++...++.|.+|+. .++.+.
T Consensus 210 d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~-l~v~~~~~~~v~~~d~-~g~~~~ 267 (333)
T 2dg1_A 210 ALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDN-LYVAMYGQGRVLVFNK-RGYPIG 267 (333)
T ss_dssp EECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCC-EEEEEETTTEEEEECT-TSCEEE
T ss_pred EecCCCcCcccccceEEEecCCC-CCCCceEECCCCC-EEEEEcCCCEEEEECC-CCCEEE
Confidence 9964 22111 1112222 4678899999998 5776667789999998 455443
No 187
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.55 E-value=5.8e-12 Score=129.10 Aligned_cols=279 Identities=12% Similarity=0.066 Sum_probs=182.3
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCC-
Q 010769 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLD- 227 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~- 227 (502)
|.+.++++...++ .|++++.... .+. ..+.+...|.++.+ +|+|++|++++.++.|.+||+.
T Consensus 165 ~~~~~~V~~~~~~-----~V~viD~~t~---~v~--~~i~~g~~p~~v~~-------SpDGr~lyv~~~dg~V~viD~~~ 227 (567)
T 1qks_A 165 LENLFSVTLRDAG-----QIALIDGSTY---EIK--TVLDTGYAVHISRL-------SASGRYLFVIGRDGKVNMIDLWM 227 (567)
T ss_dssp GGGEEEEEETTTT-----EEEEEETTTC---CEE--EEEECSSCEEEEEE-------CTTSCEEEEEETTSEEEEEETTS
T ss_pred CCceEEEEeCCCC-----eEEEEECCCC---eEE--EEEeCCCCccceEE-------CCCCCEEEEEcCCCeEEEEECCC
Confidence 4344445554444 7777876654 222 22233334444444 8999999999999999999985
Q ss_pred -CCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEec----CCCCcEEEEEecCCcEEEEECCCCeee
Q 010769 228 -VIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN----KEFRNILASASADKQVKIWDVAAGKCN 302 (502)
Q Consensus 228 -~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~----~~~~~~l~sgs~Dg~v~vwd~~~~~~~ 302 (502)
+...+. .+.. ......++|+ |+++.++++...+++|.|+|..+.+.+
T Consensus 228 ~t~~~v~---------------------------~i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~ 279 (567)
T 1qks_A 228 KEPTTVA---------------------------EIKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK 279 (567)
T ss_dssp SSCCEEE---------------------------EEEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE
T ss_pred CCCcEeE---------------------------EEec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE
Confidence 321111 1111 1235789999 686655666667799999999999888
Q ss_pred EEecc----------CC-CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEeecCCeEEEEeCCCCCCEEEE
Q 010769 303 LTLEH----------HT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWAVAADVESLAWDPHAEHSFVV 370 (502)
Q Consensus 303 ~~~~~----------h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~~~~~v~~v~~~p~~~~~l~~ 370 (502)
.++.. |. ..+..+..++.++.++++....|.|.++|........ ...........+.|+|++..++++
T Consensus 280 ~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va 359 (567)
T 1qks_A 280 KIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITA 359 (567)
T ss_dssp EEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEE
T ss_pred EEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEE
Confidence 77642 22 2678899999887777777788999999987654322 122334457788999998866667
Q ss_pred EeCCCeEEEEECCCCCCCCCCCCCCccEEEec-----CCCCeeEEEEcCCCCCEEEEEe-CCCcEEEEECCCCC-----e
Q 010769 371 SLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-----HDKAVCTISYNPLVPNLLATGS-TDKMVKLWDLSNNQ-----P 439 (502)
Q Consensus 371 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~~~~~l~t~s-~dg~i~vwd~~~~~-----~ 439 (502)
...++.|.++|+.+. +.+..+.. |.+....+ ++|++..+.+++. .++.|.++|....+ .
T Consensus 360 ~~~sn~V~ViD~~t~---------kl~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~ 429 (567)
T 1qks_A 360 ANARNKLVVIDTKEG---------KLVAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAW 429 (567)
T ss_dssp EGGGTEEEEEETTTT---------EEEEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBT
T ss_pred eCCCCeEEEEECCCC---------cEEEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccC
Confidence 778899999999986 44444433 33222222 5787535556654 46899999998722 2
Q ss_pred eEEEEecCCCCCEEEEEEcCCCCcEEEEEeC------CCcEEEEECCCC
Q 010769 440 SCIASRNPKAGAVFSVAFSEDSPFVLAIGGS------KGKLEIWDTLSD 482 (502)
Q Consensus 440 ~~~~~~~~~~~~v~~~~~spd~~~llasg~~------dg~i~vwd~~~~ 482 (502)
..+..+......-..+.++|+++++.+.... .++|.|+|+.+.
T Consensus 430 kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 430 KILDSFPALGGGSLFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAM 478 (567)
T ss_dssp SEEEEEECSCSCCCCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGC
T ss_pred EEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcc
Confidence 2444544433333447789999975554311 358999999876
No 188
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.55 E-value=3.3e-12 Score=135.94 Aligned_cols=254 Identities=9% Similarity=0.022 Sum_probs=165.6
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecC
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM 217 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~ 217 (502)
+...+..+.|+|+|++||.+...+......||+++...+ ...... ........+.| +|+|+.|+.++.
T Consensus 123 ~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg---~~~~~~--~~~~~~~~~~w-------spDg~~l~~~~~ 190 (710)
T 2xdw_A 123 GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA---KELPDV--LERVKFSCMAW-------THDGKGMFYNAY 190 (710)
T ss_dssp SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT---EEEEEE--EEEECSCCEEE-------CTTSSEEEEEEC
T ss_pred CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---CCCccc--ccCcccceEEE-------EeCCCEEEEEEE
Confidence 334678899999999999887765433346777776554 222110 00001234566 899999999988
Q ss_pred CCc----------------EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcE
Q 010769 218 EPA----------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNI 281 (502)
Q Consensus 218 dg~----------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~ 281 (502)
++. |++|++.+..... ........|...+..+.|+|+++ +
T Consensus 191 ~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------------------~~v~~~~~~~~~~~~~~~SpDg~-~ 246 (710)
T 2xdw_A 191 PQQDGKSDGTETSTNLHQKLYYHVLGTDQSED-----------------------ILCAEFPDEPKWMGGAELSDDGR-Y 246 (710)
T ss_dssp CCCSSCCSSSCCCCCCCCEEEEEETTSCGGGC-----------------------EEEECCTTCTTCEEEEEECTTSC-E
T ss_pred CCccccccccccccCCCCEEEEEECCCCcccc-----------------------eEEeccCCCCeEEEEEEEcCCCC-E
Confidence 765 9999986532110 11112223556688999999965 5
Q ss_pred EEEEec-----CCcEEEEECCC------Ce-eeEEeccCCCCeEEEEEcCCCCcEEEEEECC---CcEEEEeCCCCCC--
Q 010769 282 LASASA-----DKQVKIWDVAA------GK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTH-- 344 (502)
Q Consensus 282 l~sgs~-----Dg~v~vwd~~~------~~-~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~-- 344 (502)
|+.++. +..|++||+.+ +. ....+..+...+.. .|++++..+++.+..+ +.|.+|++.++..
T Consensus 247 l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~ 325 (710)
T 2xdw_A 247 VLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESK 325 (710)
T ss_dssp EEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGG
T ss_pred EEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCccc
Confidence 555543 56899999986 43 35556666666655 4888884555554433 3699999987642
Q ss_pred ccceEeecC--CeEEEEeCCCCCCEEEEEeCCCe--EEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEE
Q 010769 345 SGFKWAVAA--DVESLAWDPHAEHSFVVSLEDGT--IKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 345 ~~~~~~~~~--~v~~v~~~p~~~~~l~~~~~dg~--i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
......+.. .+..++|++. ..++++...++. |.+|++.++ ..+..+..+.+.+.+++++|++..++
T Consensus 326 ~~~l~~~~~~~~~~~~~~~~~-~~lv~~~~~~g~~~l~~~~~~~g---------~~~~~l~~~~~~v~~~~~s~d~~~l~ 395 (710)
T 2xdw_A 326 WKVLVPEHEKDVLEWVACVRS-NFLVLCYLHDVKNTLQLHDLATG---------ALLKIFPLEVGSVVGYSGQKKDTEIF 395 (710)
T ss_dssp CEEEECCCSSCEEEEEEEETT-TEEEEEEEETTEEEEEEEETTTC---------CEEEEECCCSSEEEEEECCTTCSEEE
T ss_pred ceeccCCCCCCeEEEEEEEcC-CEEEEEEEECCEEEEEEEECCCC---------CEEEecCCCCceEEEEecCCCCCEEE
Confidence 122333333 5778899864 457788888885 566676554 45566777778889999999874555
Q ss_pred EEEeC---CCcEEEEECCCCC
Q 010769 421 ATGST---DKMVKLWDLSNNQ 438 (502)
Q Consensus 421 ~t~s~---dg~i~vwd~~~~~ 438 (502)
++.+. .+.|++||+.+++
T Consensus 396 ~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 396 YQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEEECSSCCCEEEEEETTSSS
T ss_pred EEEeCCCCCCEEEEEECCCCc
Confidence 55443 4789999998876
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.54 E-value=1.4e-12 Score=121.09 Aligned_cols=241 Identities=9% Similarity=0.032 Sum_probs=158.2
Q ss_pred ccccccccCCCceEE-EEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 141 DLEDMTINPNDAVIV-CARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~-~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
...++++.|++++++ +....+ .|+.++.... ...... ......|.++.+ +++|+++++.. ++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~-----~i~~~~~~~~---~~~~~~-~~~~~~p~~i~~-------~~~g~l~v~~~-~~ 87 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYG-----RVVKLATGST---GTTVLP-FNGLYQPQGLAV-------DGAGTVYVTDF-NN 87 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSC-----EEEEECC--------EECC-CCSCCSCCCEEE-------CTTCCEEEEET-TT
T ss_pred CccceEECCCCCEEEEccCCCC-----cEEEecCCCc---ccceEe-eCCcCCcceeEE-------CCCCCEEEEcC-CC
Confidence 567789999999777 434444 6667765432 111110 011123455555 67888766666 88
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|.+|+....... .........+.+|++.++ ++++++...++.|.+|+..+.
T Consensus 88 ~i~~~d~~~~~~~---------------------------~~~~~~~~~p~~i~~~~~-g~l~v~~~~~~~i~~~~~~~~ 139 (270)
T 1rwi_B 88 RVVTLAAGSNNQT---------------------------VLPFDGLNYPEGLAVDTQ-GAVYVADRGNNRVVKLAAGSK 139 (270)
T ss_dssp EEEEECTTCSCCE---------------------------ECCCCSCSSEEEEEECTT-CCEEEEEGGGTEEEEECTTCC
T ss_pred EEEEEeCCCceEe---------------------------eeecCCcCCCcceEECCC-CCEEEEECCCCEEEEEECCCc
Confidence 9999997642110 000122356889999998 457777777889999986655
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEE
Q 010769 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKG 379 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i 379 (502)
............+.++++++++ +++++...++.|.+|+................+..+++++++ .++++...++.|.+
T Consensus 140 ~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 140 TQTVLPFTGLNDPDGVAVDNSG-NVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVK 217 (270)
T ss_dssp SCEECCCCSCCSCCCEEECTTC-CEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEE
T ss_pred eeEeeccccCCCceeEEEeCCC-CEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEE
Confidence 4433223334567899999988 777777778899999987654332222222568899999987 46777777889999
Q ss_pred EECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 380 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
|+.... ........+...+.++++++++ +++++...++.|++|++...+
T Consensus 218 ~~~~~~---------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 218 LLAGST---------TSTVLPFTGLNTPLAVAVDSDR-TVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp ECTTCS---------CCEECCCCSCSCEEEEEECTTC-CEEEEEGGGTEEEEECCCGGG
T ss_pred EcCCCC---------cceeeccCCCCCceeEEECCCC-CEEEEECCCCEEEEEcCCCcc
Confidence 998654 1111112233568999999998 788888889999999987654
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.54 E-value=1.1e-12 Score=125.97 Aligned_cols=235 Identities=9% Similarity=0.019 Sum_probs=159.7
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
++++.++...++.|.+||..+...+.. + ........|++++++ .++++...
T Consensus 53 ~~~lyv~~~~~~~v~viD~~t~~~~~~---------------------------i-~~~~~p~~i~~~~~g-~lyv~~~~ 103 (328)
T 3dsm_A 53 DGIGWIVVNNSHVIFAIDINTFKEVGR---------------------------I-TGFTSPRYIHFLSDE-KAYVTQIW 103 (328)
T ss_dssp TTEEEEEEGGGTEEEEEETTTCCEEEE---------------------------E-ECCSSEEEEEEEETT-EEEEEEBS
T ss_pred CCEEEEEEcCCCEEEEEECcccEEEEE---------------------------c-CCCCCCcEEEEeCCC-eEEEEECC
Confidence 355666666679999999976432221 1 123567889998884 45555548
Q ss_pred CCcEEEEECCCCeeeEEeccCC-----CCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCCCCCCccceEeecCCeEEEEeC
Q 010769 288 DKQVKIWDVAAGKCNLTLEHHT-----DKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKWAVAADVESLAWD 361 (502)
Q Consensus 288 Dg~v~vwd~~~~~~~~~~~~h~-----~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~ 361 (502)
++.|.+||+.+++....+.... .....+++ .+..++++.. .++.|.++|+.+.+... ..........++++
T Consensus 104 ~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~-~i~~g~~p~~i~~~ 180 (328)
T 3dsm_A 104 DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVD-ELTIGIQPTSLVMD 180 (328)
T ss_dssp CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEE-EEECSSCBCCCEEC
T ss_pred CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEE-EEEcCCCccceEEc
Confidence 8999999999999887775332 14566777 3425555544 48999999999876544 33444556788999
Q ss_pred CCCCCEEEEEeCC----------CeEEEEECCCCCCCCCCCCCCccEEEecC-CCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 362 PHAEHSFVVSLED----------GTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 362 p~~~~~l~~~~~d----------g~i~i~d~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
|++. +++++..+ +.|.++|..+. +....+... ......++|+|++ +.|+++.. .|.
T Consensus 181 ~dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~---------~v~~~~~~~~g~~p~~la~~~d~-~~lyv~~~--~v~ 247 (328)
T 3dsm_A 181 KYNK-MWTITDGGYEGSPYGYEAPSLYRIDAETF---------TVEKQFKFKLGDWPSEVQLNGTR-DTLYWINN--DIW 247 (328)
T ss_dssp TTSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTT---------EEEEEEECCTTCCCEEEEECTTS-CEEEEESS--SEE
T ss_pred CCCC-EEEEECCCccCCccccCCceEEEEECCCC---------eEEEEEecCCCCCceeEEEecCC-CEEEEEcc--EEE
Confidence 9875 55555443 78999999876 444444432 2368999999988 66666544 899
Q ss_pred EEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEE----eCCCcEEEEECCCCcccccc
Q 010769 431 LWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG----GSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 431 vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg----~~dg~i~vwd~~~~~~~~~~ 488 (502)
+||+.+++................++++|++..++++. ..++.|.+||.. ++.+.++
T Consensus 248 ~~d~~t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i 308 (328)
T 3dsm_A 248 RMPVEADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEF 308 (328)
T ss_dssp EEETTCSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEE
T ss_pred EEECCCCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEE
Confidence 99998876321111122245688999999665577776 678899999998 7766543
No 191
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.54 E-value=3.1e-12 Score=119.30 Aligned_cols=211 Identities=12% Similarity=0.027 Sum_probs=154.1
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcc-cceeeEEecCCCCcEEEEEe
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHT-DSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~-~~V~~l~~~~~~~~~l~sgs 286 (502)
.+++|++++.++.|.+||..+++.+. .+..+. ..+.++.+.|+ +++|+ +
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w---------------------------~~~~~~~~~~~~~~~~pd-G~ilv--s 53 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVW---------------------------EYPLEKGWECNSVAATKA-GEILF--S 53 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEE---------------------------EEECCTTCCCCEEEECTT-SCEEE--E
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEE---------------------------EeCCCccCCCcCeEECCC-CCEEE--e
Confidence 47899999999999999986644332 222232 46788999999 45777 4
Q ss_pred cCCcEEEEECCCCeeeEEeccC-CCCeEEEEEcCCCCcEEEEEEC-CCcEEEEeCCCCCCccceEee-------cCCeEE
Q 010769 287 ADKQVKIWDVAAGKCNLTLEHH-TDKVQAVAWNHHSPQILLSGSF-DRSVVMKDARISTHSGFKWAV-------AADVES 357 (502)
Q Consensus 287 ~Dg~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~-dg~i~vwd~~~~~~~~~~~~~-------~~~v~~ 357 (502)
.++.|..||. +++.+..+..+ ...+.++.+.++| +++++.+. ++.|..++. .++... .+.. ......
T Consensus 54 ~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~-~Gk~l~-~~~~~~~~~~~~~~~~~ 129 (276)
T 3no2_A 54 YSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNM-KGEVLS-KTEFETGIERPHAQFRQ 129 (276)
T ss_dssp CBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECT-TSCEEE-EEEECCSCSSGGGSCSC
T ss_pred CCCCEEEECC-CCCEEEEEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeC-CCCEEE-EEeccCCCCcccccccC
Confidence 5788999998 89999988764 3578899999999 88888776 777877775 333222 2221 123445
Q ss_pred EEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010769 358 LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 358 v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
+++.+++. ++++...++.|..||.. + +.++++..+ ..+.++.+.+++ +++++++.++.|..+|..++
T Consensus 130 v~~~~~G~-~lv~~~~~~~v~~~d~~-G---------~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG 196 (276)
T 3no2_A 130 INKNKKGN-YLVPLFATSEVREIAPN-G---------QLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESN 196 (276)
T ss_dssp CEECTTSC-EEEEETTTTEEEEECTT-S---------CEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTC
T ss_pred ceECCCCC-EEEEecCCCEEEEECCC-C---------CEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCC
Confidence 66788765 78888899999999987 6 677887765 345677888887 88888888889999999988
Q ss_pred CeeEEEEecC------CCCCEEEEEEcCCCCcEEEEE
Q 010769 438 QPSCIASRNP------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 438 ~~~~~~~~~~------~~~~v~~~~~spd~~~llasg 468 (502)
+. +..+.. ....+..++..++|. ++++.
T Consensus 197 ~~--~w~~~~~~~~~~~l~~~~~~~~~~~G~-i~v~~ 230 (276)
T 3no2_A 197 RI--VRRVNANDIEGVQLFFVAQLFPLQNGG-LYICN 230 (276)
T ss_dssp CE--EEEEEGGGSBSCCCSEEEEEEECTTSC-EEEEE
T ss_pred cE--EEEecCCCCCCccccccccceEcCCCC-EEEEe
Confidence 84 444321 123478899999998 46655
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.51 E-value=4.5e-12 Score=135.54 Aligned_cols=288 Identities=9% Similarity=0.031 Sum_probs=171.9
Q ss_pred cCCCceEEEEEecCCcceeEEEEEecC---CCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-----C
Q 010769 148 NPNDAVIVCARNEDDVSHLEVYILEES---DGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME-----P 219 (502)
Q Consensus 148 ~p~~~~l~~~~~~~~~~~l~v~~~~~~---~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d-----g 219 (502)
+|+|+.++....++....-.+|..+.. ......|. ..+...... .|....+.|||+|++||.++.+ .
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ll-d~~~l~~~~----~~~~~~~~~SPDG~~la~~~~~~G~e~~ 189 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLL-DPNTWAKDG----ATALDAWAASDDGRLLAYSVQDGGSDWR 189 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEE-CGGGCC--------EEEEEEEECTTSSEEEEEEEETTCSEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEE-CHHHhccCC----CEEEEeEEECCCCCEEEEEEcCCCCceE
Confidence 389999998887765445678888754 22111111 110000000 0111123338999999987654 4
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCc---------
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQ--------- 290 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~--------- 290 (502)
.|++||+.++..+.. ..+...+..++|+|+ . .|+.++.++.
T Consensus 190 ~i~v~dl~tg~~~~~----------------------------~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~ 239 (741)
T 1yr2_A 190 TVKFVGVADGKPLAD----------------------------ELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQAL 239 (741)
T ss_dssp EEEEEETTTCCEEEE----------------------------EEEEEESCCCEESTT-S-EEEEEECCCC--------C
T ss_pred EEEEEECCCCCCCCc----------------------------cCCCceeccEEEECC-C-EEEEEEecCcccccccccC
Confidence 699999986443210 011122467899999 6 5555555543
Q ss_pred -----EEEEECCCCee--eEEe--ccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCC--CCccceEeecCC
Q 010769 291 -----VKIWDVAAGKC--NLTL--EHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS--THSGFKWAVAAD 354 (502)
Q Consensus 291 -----v~vwd~~~~~~--~~~~--~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~--~~~~~~~~~~~~ 354 (502)
|++|++.++.. ...+ ..+...+.++.|+|+| ++|+..+.+ ..|.+||+.++ ............
T Consensus 240 ~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 318 (741)
T 1yr2_A 240 NYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA 318 (741)
T ss_dssp CCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS
T ss_pred CCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc
Confidence 89999987652 2223 3334468899999999 666655543 38999999876 312223333344
Q ss_pred eEEEEeCCCCCCEEEEEeC---CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010769 355 VESLAWDPHAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
+.... +|++..+++.+.. ++.|.+||+.+.. ......+..+...+..++++ +..++++...++..+|
T Consensus 319 ~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~~-------~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l 388 (741)
T 1yr2_A 319 QWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGST-------PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQV 388 (741)
T ss_dssp CEEEE-EEETTEEEEEECTTCTTCEEEEEECSSSS-------CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEE
T ss_pred eEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCCc-------cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEE
Confidence 44443 3777644444432 4569999987631 01222234444556677777 3378888888998777
Q ss_pred EECC-CCCeeEEEEecC-CCCCEEEEEEcCCCCcEEEEEeC---CCcEEEEECCCCc
Q 010769 432 WDLS-NNQPSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGS---KGKLEIWDTLSDA 483 (502)
Q Consensus 432 wd~~-~~~~~~~~~~~~-~~~~v~~~~~spd~~~llasg~~---dg~i~vwd~~~~~ 483 (502)
|.+. .+. ....+.. ..+.+..++++|++..++++.++ .++|++||+.+++
T Consensus 389 ~~~~~~g~--~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 389 LAFDLDGK--PAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEETTSC--EEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTE
T ss_pred EEEeCCCC--ceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 7554 233 2333433 35778999999998865544443 3689999998876
No 193
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.50 E-value=5.4e-11 Score=111.90 Aligned_cols=277 Identities=10% Similarity=0.064 Sum_probs=178.5
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
....++.+.+++++.++....+ .|+.++.. . .+...........|.++.+ .++++++++...++
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~~~-----~v~~~~~~-~---~~~~~~~~~~~~~~~~i~~-------~~~g~l~v~~~~~~ 83 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHKAN-----KISSLDQS-G---RIKEFEVPTPDAKVMCLIV-------SSLGDIWFTENGAN 83 (300)
T ss_dssp CCEEEEEECTTSCEEEEETTTT-----EEEEECTT-S---CEEEEECSSTTCCEEEEEE-------CTTSCEEEEETTTT
T ss_pred CCcceeeECCCCCEEEEcCCCC-----eEEEECCC-C---ceEEEECCCCCCcceeEEE-------CCCCCEEEEecCCC
Confidence 4677899999999888775555 67777655 3 2222111011133445544 67888888777778
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|.+|+.. ... .. .........+.++++.++ +.++++...++.|..|+.. +
T Consensus 84 ~v~~~d~~-g~~-~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~~~~~~i~~~~~~-g 134 (300)
T 2qc5_A 84 KIGKLSKK-GGF-TE-------------------------YPLPQPDSGPYGITEGLN-GDIWFTQLNGDRIGKLTAD-G 134 (300)
T ss_dssp EEEEECTT-SCE-EE-------------------------EECSSTTCCEEEEEECST-TCEEEEETTTTEEEEECTT-S
T ss_pred eEEEECCC-CCe-EE-------------------------ecCCCCCCCCccceECCC-CCEEEEccCCCeEEEECCC-C
Confidence 89999875 211 10 011122356889999988 4577776668899999987 6
Q ss_pred eeeE-EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCCCCCEEEEEeCCCeE
Q 010769 300 KCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPHAEHSFVVSLEDGTI 377 (502)
Q Consensus 300 ~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~~~~~l~~~~~dg~i 377 (502)
+... .+......+.++++.+++ +++++...++.|..++. .+....... .....+..+++++++ .++++....+.|
T Consensus 135 ~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i 211 (300)
T 2qc5_A 135 TIYEYDLPNKGSYPAFITLGSDN-ALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKI 211 (300)
T ss_dssp CEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEE
T ss_pred CEEEccCCCCCCCceeEEECCCC-CEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEE
Confidence 5442 233345678999999998 66666666788999998 433322111 123457899999976 456666667789
Q ss_pred EEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEE
Q 010769 378 KGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAF 457 (502)
Q Consensus 378 ~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 457 (502)
.+|+. .+ ......+..+...+.++++.+++ ++.++...++.|..|+. +++. ...........+.++++
T Consensus 212 ~~~~~-~g--------~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~ 279 (300)
T 2qc5_A 212 GRITT-TG--------EISEYDIPTPNARPHAITAGKNS-EIWFTEWGANQIGRITN-DNTI-QEYQLQTENAEPHGITF 279 (300)
T ss_dssp EEECT-TC--------CEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECT-TSCE-EEEECCSTTCCCCCEEE
T ss_pred EEEcC-CC--------cEEEEECCCCCCCceEEEECCCC-CEEEeccCCCeEEEECC-CCcE-EEEECCccCCccceeEe
Confidence 99998 33 11222233345678999999987 66666666789999998 4442 22333334456889999
Q ss_pred cCCCCcEEEEEeCCCcEEEEEC
Q 010769 458 SEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 458 spd~~~llasg~~dg~i~vwd~ 479 (502)
+++|. ++++ +.. .|..++.
T Consensus 280 ~~~g~-l~v~-~~~-~i~~~~p 298 (300)
T 2qc5_A 280 GKDGS-VWFA-LKC-KIGKLNL 298 (300)
T ss_dssp CTTSC-EEEE-CSS-EEEEEEE
T ss_pred CCCCC-EEEE-ccC-ceEEeCC
Confidence 99998 4554 334 6777765
No 194
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.50 E-value=7.1e-11 Score=115.07 Aligned_cols=292 Identities=12% Similarity=0.045 Sum_probs=175.2
Q ss_pred cccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec---------
Q 010769 146 TINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS--------- 216 (502)
Q Consensus 146 ~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~--------- 216 (502)
...|+++.+.++...+......|++|+.... .+. ........| .+. ++|+|++|+++.
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~---~~~--~~i~~g~~p-~i~-------~spDg~~lyv~n~~~~~~~rg 93 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSG---SIL--GHVNGGFLP-NPV-------AAHSGSEFALASTSFSRIAKG 93 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCC---eEE--EEecCCCCC-CeE-------ECCCCCEEEEEeccccccccC
Confidence 3447777776664311111116777776554 322 222222223 333 389999999886
Q ss_pred -CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcEEE
Q 010769 217 -MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKI 293 (502)
Q Consensus 217 -~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v~v 293 (502)
.++.|.+||..+........+.+. . .. .+......++|+|+++ +|+.++. ++.|.+
T Consensus 94 ~~~~~v~viD~~t~~~~~~i~~~~~---------------~----~~-~~g~~p~~~~~spDG~-~l~v~n~~~~~~v~v 152 (373)
T 2mad_H 94 KRTDYVEVFDPVTFLPIADIELPDA---------------P----RF-DVGPYSWMNANTPNNA-DLLFFQFAAGPAVGL 152 (373)
T ss_pred CCCCeEEEEECCCCcEEEEEECCCc---------------c----cc-ccCCCccceEECCCCC-EEEEEecCCCCeEEE
Confidence 367899999975443322211100 0 00 0112345899999955 6666653 578999
Q ss_pred EECCCCeeeEE-eccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-----eecCC-eEEEEeCCCCCC
Q 010769 294 WDVAAGKCNLT-LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-----AVAAD-VESLAWDPHAEH 366 (502)
Q Consensus 294 wd~~~~~~~~~-~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~~~~~-v~~v~~~p~~~~ 366 (502)
+| .+++.+.. +.. .. ++.+.|.+...+++.+.||.+.+++. +++...... ....+ .....+.+++..
T Consensus 153 iD-~t~~~~~~~i~~-~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 226 (373)
T 2mad_H 153 VV-QGGSSDDQLLSS-PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGR 226 (373)
T ss_pred EE-CCCCEEeEEcCC-Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCE
Confidence 99 99998887 642 22 24556776677888889999999999 665442111 11111 123445565554
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec----------CCCCeeEEEEcCCCCCEEEEEe---------CCC
Q 010769 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA----------HDKAVCTISYNPLVPNLLATGS---------TDK 427 (502)
Q Consensus 367 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~----------h~~~v~~l~~sp~~~~~l~t~s---------~dg 427 (502)
++++. ..+.|.+.|+..... ..+..+.. .......+.++|++.+++++.. ..+
T Consensus 227 ~~~~~-~~~~v~vid~~~~~~-------~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~ 298 (373)
T 2mad_H 227 IVWPV-YSGKILQADISAAGA-------TNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAK 298 (373)
T ss_pred EEEEc-CCceEEEEeccCCcc-------eEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCC
Confidence 44444 678999999875421 11111111 1223445788998844444332 135
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCcccccc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~-~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.++|+.+.+. +..+. ..+...+++|+|||+++++++. .++.|.+||+.+++.+.+.
T Consensus 299 ~V~VID~~t~~v--v~~i~-~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~i 357 (373)
T 2mad_H 299 EVTSVTGLVGQT--SSQIS-LGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQST 357 (373)
T ss_pred eEEEEECCCCEE--EEEEE-CCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEeee
Confidence 799999998874 33333 2235889999999995466665 5899999999999988773
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.50 E-value=5.7e-12 Score=118.90 Aligned_cols=204 Identities=7% Similarity=0.034 Sum_probs=144.8
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 343 (502)
.+.....+++|+|++..+++++..++.|.+|+..++ ...+..+...+.++++++++ .++++...++.|.+||..+++
T Consensus 25 ~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 25 DGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp CCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTC-CEEEEETTTTEEEEECSTTCC
T ss_pred cCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCC-cEEEEecCCCeEEEEcCCCCc
Confidence 455678899999995548889999999999999887 56666677889999999998 777766667899999997766
Q ss_pred CccceEee----cCCeEEEEeCCCCCCEEEE----Ee-------------CCCeEEEEECCCCCCCCCCCCCCccEEEec
Q 010769 344 HSGFKWAV----AADVESLAWDPHAEHSFVV----SL-------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHA 402 (502)
Q Consensus 344 ~~~~~~~~----~~~v~~v~~~p~~~~~l~~----~~-------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 402 (502)
........ ...+..++++|++. ++++ |+ ..+.|..++.. + .+..+..
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----------~~~~~~~ 169 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----------TLSAPIR 169 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----------CEEEEEC
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C----------CEEEeec
Confidence 43321111 23466799999875 5555 32 13456666554 2 2333455
Q ss_pred CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC-CCCe-eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECC
Q 010769 403 HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS-NNQP-SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 403 h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~-~~~~-~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~ 480 (502)
+......++|+|++ ++|++.+.++.|++|++. .++. .....+..+.+.+.+++++++|. ++++. ++.|.+|+..
T Consensus 170 ~~~~~~gi~~s~dg-~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~-l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 170 DRVKPNGLAFLPSG-NLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGL-IWASA--GDGVHVLTPD 245 (296)
T ss_dssp CCSSEEEEEECTTS-CEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSC-EEEEE--TTEEEEECTT
T ss_pred CCCCCccEEECCCC-CEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCC-EEEEc--CCeEEEECCC
Confidence 66678999999998 666888888999999997 4443 11222233455677899999998 45544 7889999986
Q ss_pred CCccccc
Q 010769 481 SDAGISN 487 (502)
Q Consensus 481 ~~~~~~~ 487 (502)
++.+..
T Consensus 246 -g~~~~~ 251 (296)
T 3e5z_A 246 -GDELGR 251 (296)
T ss_dssp -SCEEEE
T ss_pred -CCEEEE
Confidence 554443
No 196
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.49 E-value=2e-12 Score=124.89 Aligned_cols=230 Identities=12% Similarity=0.162 Sum_probs=145.0
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC-
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME- 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d- 218 (502)
..+..+.|+|+|+.|+.++..++.....||+++...+....+..++ . ..++.| +|+|+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~-----~-~~~~~w-------spdg~~l~~~~~~~ 125 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAK-----N-IRSLEW-------NEDSRKLLIVGFKR 125 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEES-----E-EEEEEE-------CTTSSEEEEEEECC
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCC-----C-ccceeE-------CCCCCEEEEEEccC
Confidence 3567899999999999887654223557888886554211222222 1 355666 8999999888642
Q ss_pred --------------------------CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 219 --------------------------PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 219 --------------------------g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
..|.+|++..+.... .+.. . .+..+
T Consensus 126 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~---------------------------~l~~-~-~~~~~ 176 (347)
T 2gop_A 126 REDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE---------------------------EFEK-P-RFSSG 176 (347)
T ss_dssp CC---------CCCC---------CEEEEEEEETTTTEEEE---------------------------EEEE-E-TTCEE
T ss_pred CCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe---------------------------eecC-C-Ccccc
Confidence 468888876422100 1111 2 67889
Q ss_pred EecCCCCcEEEEEecCC-------cEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC--------CcEEEE
Q 010769 273 AWNKEFRNILASASADK-------QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMK 337 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg-------~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d--------g~i~vw 337 (502)
+|+|++ ++++++.++ ...||.+.+++. ..+..+ ..+.++ +|+| +.|+.++.+ ..|.+|
T Consensus 177 ~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~-~~~~~~--spdg-~~l~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK-VSFYAV--DSDG-ERILLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE--EEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-ESEEEE--EECS-SCEEEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe--EEEEEecccccccccccccEEEeCCCce-EEeccC-cceeeE--CCCC-CEEEEEEccccCCccccceEEEE
Confidence 999994 777776542 344554445554 334334 455544 8999 556655543 468888
Q ss_pred eCCCCCCccceEeecCCeEE-EEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC
Q 010769 338 DARISTHSGFKWAVAADVES-LAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 338 d~~~~~~~~~~~~~~~~v~~-v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
| ++........+...+.. +.|+ ++ ++++++.++.+++| +.++ .. ..+..+...|.+++|+|
T Consensus 250 d--~~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~-~~~g---------~~-~~~~~~~~~v~~~~~s~-- 311 (347)
T 2gop_A 250 D--GKEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY-IWDG---------EI-KPIAKGRHWIMGFDVDE-- 311 (347)
T ss_dssp C--SSCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE-EESS---------SE-EEEECSSSEEEEEEESS--
T ss_pred C--CCceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE-EcCC---------ce-EEEecCCCeEEeeeeeC--
Confidence 8 33322222233456775 8998 65 88888999999999 8732 33 34445677899999998
Q ss_pred CCEEEEEeCCCcE-EEEECCCCC
Q 010769 417 PNLLATGSTDKMV-KLWDLSNNQ 438 (502)
Q Consensus 417 ~~~l~t~s~dg~i-~vwd~~~~~ 438 (502)
.++++++.++.. .||.+. ++
T Consensus 312 -~~~~~~~~~~~~~~l~~~~-g~ 332 (347)
T 2gop_A 312 -IVVYLKETATRLRELFTWD-GE 332 (347)
T ss_dssp -SEEEEEECSSSCCEEEEES-SS
T ss_pred -cEEEEEcCCCChHHheEeC-Cc
Confidence 467777766654 777765 44
No 197
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.48 E-value=7.1e-11 Score=111.03 Aligned_cols=229 Identities=8% Similarity=0.041 Sum_probs=157.6
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
.++|+++++...++.|.+|+.. .. ... .....+...+.+|++.++ +.++++.
T Consensus 23 d~~g~l~v~~~~~~~v~~~d~~-~~-~~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~ 74 (299)
T 2z2n_A 23 SDKGKVWITQHKANMISCINLD-GK-ITE-------------------------YPLPTPDAKVMCLTISSD-GEVWFTE 74 (299)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-CC-EEE-------------------------EECSSTTCCEEEEEECTT-SCEEEEE
T ss_pred CCCCCEEEEecCCCcEEEEcCC-CC-eEE-------------------------ecCCcccCceeeEEECCC-CCEEEeC
Confidence 6789888777667899999976 21 110 011123467899999998 4577766
Q ss_pred ecCCcEEEEECCCCee-eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-eecCCeEEEEeCCC
Q 010769 286 SADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-AVAADVESLAWDPH 363 (502)
Q Consensus 286 s~Dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~v~~~p~ 363 (502)
..++.|..|+.. ++. ...+......+.++++.+++ .++++...++.|.+||. .+....... .....+..++++++
T Consensus 75 ~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~ 151 (299)
T 2z2n_A 75 NAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKIREYELPNKGSYPSFITLGSD 151 (299)
T ss_dssp TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTT
T ss_pred CCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCEEEecCCCCCCCCceEEEcCC
Confidence 668899999986 432 22222345678999999988 77777777889999998 433222111 12346889999997
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010769 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+. ++++....+.|..||. ++. ........+...+.++++.+++ .++++....+.|.+|+. +++.. ..
T Consensus 152 g~-l~v~~~~~~~i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~~-~~ 218 (299)
T 2z2n_A 152 NA-LWFTENQNNAIGRITE-SGD--------ITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEIT-EF 218 (299)
T ss_dssp SC-EEEEETTTTEEEEECT-TCC--------EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEE-EE
T ss_pred CC-EEEEeCCCCEEEEEcC-CCc--------EEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcEE-EE
Confidence 64 6666666789999998 441 1112233345568899999987 77777666888999999 66532 23
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
....+...+.+++++++|. ++++...++.|.+|+.
T Consensus 219 ~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~ 253 (299)
T 2z2n_A 219 KIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS 253 (299)
T ss_dssp ECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET
T ss_pred ECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC
Confidence 3344556799999999998 5666556789999998
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.47 E-value=3.4e-11 Score=116.06 Aligned_cols=295 Identities=12% Similarity=0.080 Sum_probs=179.9
Q ss_pred ccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec--------
Q 010769 145 MTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS-------- 216 (502)
Q Consensus 145 ~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~-------- 216 (502)
....|+++.+.++........-.|++++.... .+ -..+.....|- +.. +|+|++|.+++
T Consensus 38 ~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~---~v--~~~I~vG~~P~-va~-------spDG~~lyVan~~~~r~~~ 104 (386)
T 3sjl_D 38 EAPAPDARRVYVNDPAHFAAVTQQFVIDGEAG---RV--IGMIDGGFLPN-PVV-------ADDGSFIAHASTVFSRIAR 104 (386)
T ss_dssp CCCCCCTTEEEEEECGGGCSSEEEEEEETTTT---EE--EEEEEECSSCE-EEE-------CTTSSCEEEEEEEEEETTE
T ss_pred eccCCCCCEEEEEcCcccCCCCEEEEEECCCC---eE--EEEEECCCCCc-EEE-------CCCCCEEEEEccccccccc
Confidence 45579999888886531000127888887654 32 23333444442 433 89999988775
Q ss_pred --CCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcEE
Q 010769 217 --MEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVK 292 (502)
Q Consensus 217 --~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v~ 292 (502)
.++.|.+||..+......+.+.++ ...........++|+|+++ +|+.+.. ++.|.
T Consensus 105 G~~~~~VsviD~~t~~v~~~I~v~~g--------------------~r~~~g~~P~~~a~spDGk-~lyVan~~~~~~Vs 163 (386)
T 3sjl_D 105 GERTDYVEVFDPVTLLPTADIELPDA--------------------PRFLVGTYPWMTSLTPDGK-TLLFYQFSPAPAVG 163 (386)
T ss_dssp EEEEEEEEEECTTTCCEEEEEEETTC--------------------CCCCBSCCGGGEEECTTSS-EEEEEECSSSCEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEECCCc--------------------cccccCCCCceEEEcCCCC-EEEEEEcCCCCeEE
Confidence 357899999987544332221100 0000122456799999965 5555543 68999
Q ss_pred EEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC-CCCccceEee----cCCe-EEEEeC-CCCC
Q 010769 293 IWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHSGFKWAV----AADV-ESLAWD-PHAE 365 (502)
Q Consensus 293 vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~~~~~~~----~~~v-~~v~~~-p~~~ 365 (502)
++|+.+++.+.++... + + ....|.+.+.+++.+.||.+.+.++.. ++........ ...+ ....|. +++
T Consensus 164 VID~~t~~vv~tI~v~-g-~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG- 238 (386)
T 3sjl_D 164 VVDLEGKAFKRMLDVP-D-C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG- 238 (386)
T ss_dssp EEETTTTEEEEEEECC-S-E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-
T ss_pred EEECCCCcEEEEEECC-C-c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-
Confidence 9999999999988532 1 1 223355557788889999999999876 3332101011 0111 123553 444
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe----------cCCCCeeEEEEcCCCCCEEEEEeC---------C
Q 010769 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH----------AHDKAVCTISYNPLVPNLLATGST---------D 426 (502)
Q Consensus 366 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~----------~h~~~v~~l~~sp~~~~~l~t~s~---------d 426 (502)
.++..+.+|.|+++|+..... .....+. ........++++|.+.+++++-.. .
T Consensus 239 -~~~~vs~~g~V~v~d~~~~~~-------~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~ 310 (386)
T 3sjl_D 239 -RLVWPTYTGKIHQIDLSSGDA-------KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTAS 310 (386)
T ss_dssp -EEEEEBTTSEEEEEECTTSSC-------EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCE
T ss_pred -cEEEEeCCCEEEEEECCCCcc-------eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCC
Confidence 233455689999999976521 1111111 112334457788987444444321 2
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCC-cEEEEEeCCCcEEEEECCCCccccccc
Q 010769 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP-FVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~-~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.|.++|+.+.+........ ..+.+|++++|++ .++++...++.|.++|..+++.++++-
T Consensus 311 ~~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 311 RFVVVLDAKTGERLAKFEMG---HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEEEEETTTCCEEEEEEEE---EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred CEEEEEECCCCeEEEEEECC---CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 56999999999854333332 3688999999996 445555668999999999999887653
No 199
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.46 E-value=7e-12 Score=133.02 Aligned_cols=257 Identities=9% Similarity=-0.005 Sum_probs=161.8
Q ss_pred CCccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCc-ceeeeecCCCCCCCCCCEEEEe
Q 010769 137 EDSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFP-LCMAWLDCPLKDREKGNFMAVG 215 (502)
Q Consensus 137 ~~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~-~~~~w~~~~~~~s~~~~~la~g 215 (502)
.|...+..+.|||+|++||.+...+......||+++...+ .... ...++... ..+.| +|+|+.|+.+
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg---~~~~--~~~~~~~~~~~~~w-------spDg~~l~~~ 185 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSG---EWSK--VDVIEGGKYATPKW-------TPDSKGFYYE 185 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTC---CBCS--SCCBSCCTTCCCEE-------CTTSSEEEEE
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCC---CCcC--CcccCcccccceEE-------ecCCCEEEEE
Confidence 3455788999999999999776543221236666665554 2210 00111111 34455 8999999999
Q ss_pred cCCCc-------------EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEE
Q 010769 216 SMEPA-------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 216 ~~dg~-------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l 282 (502)
+.+.. |++|++.+..... ........|...+.++.|+|++. +|
T Consensus 186 ~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~-----------------------~lv~~~~~~~~~~~~~~~SpDG~-~l 241 (695)
T 2bkl_A 186 WLPTDPSIKVDERPGYTTIRYHTLGTEPSKD-----------------------TVVHERTGDPTTFLQSDLSRDGK-YL 241 (695)
T ss_dssp ECCCCTTSCGGGGGGGCEEEEEETTSCGGGC-----------------------EEEECCCCCTTCEEEEEECTTSC-CE
T ss_pred EecCCCCCccccCCCCCEEEEEECCCCchhc-----------------------eEEEecCCCCEEEEEEEECCCCC-EE
Confidence 88766 9999987532111 11222234667789999999965 55
Q ss_pred EEEecCC----cEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEE---CCCcEEEEeCCCCCCc--cceEee--
Q 010769 283 ASASADK----QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS---FDRSVVMKDARISTHS--GFKWAV-- 351 (502)
Q Consensus 283 ~sgs~Dg----~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---~dg~i~vwd~~~~~~~--~~~~~~-- 351 (502)
+.++.++ .|.+|+..+++. ..+..+...+....| +++ .+++++. .++.|.+||+.++... .....+
T Consensus 242 ~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~~~~~~~-~~g-~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 318 (695)
T 2bkl_A 242 FVYILRGWSENDVYWKRPGEKDF-RLLVKGVGAKYEVHA-WKD-RFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDS 318 (695)
T ss_dssp EEEEEETTTEEEEEEECTTCSSC-EEEEECSSCCEEEEE-ETT-EEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCS
T ss_pred EEEEeCCCCceEEEEEcCCCCce-EEeecCCCceEEEEe-cCC-cEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCC
Confidence 5555554 677777655543 444445556666667 667 4555544 2588999999876531 222322
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC-CCCeeEEEEcCCCCCEEEEEeC---CC
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-DKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
...+..++|+ +..++++...++..++|.+... ......+..+ ...+..++++|++..++++.+. .+
T Consensus 319 ~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 388 (695)
T 2bkl_A 319 SASLLSVSIV--GGHLSLEYLKDATSEVRVATLK--------GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPR 388 (695)
T ss_dssp SCEEEEEEEE--TTEEEEEEEETTEEEEEEEETT--------CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEE
T ss_pred CCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC--------CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 3347788887 3458888889998888866532 1334445444 5678888999988445544433 46
Q ss_pred cEEEEECCCCCeeEE
Q 010769 428 MVKLWDLSNNQPSCI 442 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~ 442 (502)
+|++||+.+++...+
T Consensus 389 ~v~~~d~~~g~~~~l 403 (695)
T 2bkl_A 389 QIYKTSVSTGKSELW 403 (695)
T ss_dssp EEEEEETTTCCEEEE
T ss_pred EEEEEECCCCcEEEE
Confidence 799999998774333
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.44 E-value=1.8e-11 Score=117.45 Aligned_cols=198 Identities=7% Similarity=-0.041 Sum_probs=140.7
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
....++.+.. ..++++...++.|.+||..+++.+.++. .......+++++++ .++++...++.|.+||+.+.+...
T Consensus 44 ~~~~~i~~~~--~~lyv~~~~~~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 44 DVAQSMVIRD--GIGWIVVNNSHVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp SCEEEEEEET--TEEEEEEGGGTEEEEEETTTCCEEEEEE-CCSSEEEEEEEETT-EEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ccceEEEEEC--CEEEEEEcCCCEEEEEECcccEEEEEcC-CCCCCcEEEEeCCC-eEEEEECCCCeEEEEECCCCeEEE
Confidence 4467777754 4566677778999999999999988885 35678899998888 666665589999999998876543
Q ss_pred ceEeecC------CeEEEEeCCCCCCEEEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCE
Q 010769 347 FKWAVAA------DVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~~~~~~------~v~~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
...... ....+++ .+..++++.. .++.|.+||+.+. ..+..+... .....++++|++ ++
T Consensus 120 -~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~---------~~~~~i~~g-~~p~~i~~~~dG-~l 185 (328)
T 3dsm_A 120 -YIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETD---------KVVDELTIG-IQPTSLVMDKYN-KM 185 (328)
T ss_dssp -EEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTT---------EEEEEEECS-SCBCCCEECTTS-EE
T ss_pred -EEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCC---------eEEEEEEcC-CCccceEEcCCC-CE
Confidence 233333 5566777 3444444444 4889999999886 445555433 345789999988 66
Q ss_pred EEEEeCC----------CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 420 LATGSTD----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 420 l~t~s~d----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
++++..+ +.|.+||..+++........ .......++|+|++.++++ +.. .|.+||+.+++...
T Consensus 186 ~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~-~g~~p~~la~~~d~~~lyv-~~~--~v~~~d~~t~~~~~ 258 (328)
T 3dsm_A 186 WTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFK-LGDWPSEVQLNGTRDTLYW-INN--DIWRMPVEADRVPV 258 (328)
T ss_dssp EEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECC-TTCCCEEEEECTTSCEEEE-ESS--SEEEEETTCSSCCS
T ss_pred EEEECCCccCCccccCCceEEEEECCCCeEEEEEecC-CCCCceeEEEecCCCEEEE-Ecc--EEEEEECCCCceee
Confidence 6666554 78999999988743222222 1236889999999986444 433 89999999887653
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.42 E-value=1.4e-11 Score=114.82 Aligned_cols=188 Identities=15% Similarity=0.106 Sum_probs=142.1
Q ss_pred cEEEEEecCCcEEEEECCCCeeeEEeccCC-CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeec--CCeE
Q 010769 280 NILASASADKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVA--ADVE 356 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--~~v~ 356 (502)
++|++++.++.|.+||..+|+.+.++..+. ..+.++.+.|+| ++|+ +.++.|..||. +++... .+... ..+.
T Consensus 6 ~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~~~W-~~~~~~~~~~~ 80 (276)
T 3no2_A 6 HLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGRELW-NIAAPAGCEMQ 80 (276)
T ss_dssp EEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSCEEE-EEECCTTCEEE
T ss_pred cEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCCEEE-EEcCCCCcccc
Confidence 689999999999999999999999998765 578999999999 7777 45788999998 555433 23322 4678
Q ss_pred EEEeCCCCCCEEEEEeC-CCeEEEEECCCCCCCCCCCCCCccEEEec------CCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 357 SLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHA------HDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 357 ~v~~~p~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
++.+.|++. ++++.+. ++.|..++. .+ +.++.+.. +......+++.+++ ++|++.+.++.|
T Consensus 81 ~~~~~~dG~-~lv~~~~~~~~v~~vd~-~G---------k~l~~~~~~~~~~~~~~~~~~v~~~~~G-~~lv~~~~~~~v 148 (276)
T 3no2_A 81 TARILPDGN-ALVAWCGHPSTILEVNM-KG---------EVLSKTEFETGIERPHAQFRQINKNKKG-NYLVPLFATSEV 148 (276)
T ss_dssp EEEECTTSC-EEEEEESTTEEEEEECT-TS---------CEEEEEEECCSCSSGGGSCSCCEECTTS-CEEEEETTTTEE
T ss_pred ccEECCCCC-EEEEecCCCCEEEEEeC-CC---------CEEEEEeccCCCCcccccccCceECCCC-CEEEEecCCCEE
Confidence 889999876 6666665 778888775 33 44555432 22345567788988 899999999999
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+||.. ++ .+..+... ..+.++.+.+++. ++++++.+++|..+|..+++.+.+.-
T Consensus 149 ~~~d~~-G~--~~w~~~~~-~~~~~~~~~~~g~-~~v~~~~~~~v~~~d~~tG~~~w~~~ 203 (276)
T 3no2_A 149 REIAPN-GQ--LLNSVKLS-GTPFSSAFLDNGD-CLVACGDAHCFVQLNLESNRIVRRVN 203 (276)
T ss_dssp EEECTT-SC--EEEEEECS-SCCCEEEECTTSC-EEEECBTTSEEEEECTTTCCEEEEEE
T ss_pred EEECCC-CC--EEEEEECC-CCccceeEcCCCC-EEEEeCCCCeEEEEeCcCCcEEEEec
Confidence 999998 77 34444433 3456788899998 57777778899999999898876654
No 202
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.42 E-value=8.8e-11 Score=110.85 Aligned_cols=226 Identities=9% Similarity=0.065 Sum_probs=148.8
Q ss_pred CC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 RE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
++ ++.++++....+.|..|+..+.... . ..+...+.++++++++. ++++
T Consensus 21 ~~~~~~l~~~d~~~~~i~~~d~~~~~~~--------------------------~---~~~~~~~~~i~~~~dG~-l~v~ 70 (297)
T 3g4e_A 21 EEVSNSLLFVDIPAKKVCRWDSFTKQVQ--------------------------R---VTMDAPVSSVALRQSGG-YVAT 70 (297)
T ss_dssp ETTTTEEEEEETTTTEEEEEETTTCCEE--------------------------E---EECSSCEEEEEEBTTSS-EEEE
T ss_pred ECCCCEEEEEECCCCEEEEEECCCCcEE--------------------------E---EeCCCceEEEEECCCCC-EEEE
Confidence 45 4677788888899999998642210 0 01345789999999954 4444
Q ss_pred EecCCcEEEEECCCCeeeEEecc----CCCCeEEEEEcCCCCcEEEEEECC---------CcEEEEeCCCCCCccceEee
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSFD---------RSVVMKDARISTHSGFKWAV 351 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~~~d---------g~i~vwd~~~~~~~~~~~~~ 351 (502)
. ++.|.+||..+++....... ....+..++++|+| +++++.... ..-.+|.+............
T Consensus 71 -~-~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~ 147 (297)
T 3g4e_A 71 -I-GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ 147 (297)
T ss_dssp -E-TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE
T ss_pred -E-CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec
Confidence 4 56899999988865433221 12357889999999 665544321 23455555433322223344
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECC--CCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIR--TAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~--~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
......++|+|++..++++.+..+.|..|++. ++... .......+..+......+++.++| ++.++....+.|
T Consensus 148 ~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~----~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v 222 (297)
T 3g4e_A 148 VDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQIS----NRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRV 222 (297)
T ss_dssp ESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEE----EEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEE
T ss_pred cccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCccc----CcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEE
Confidence 45678999999987666777778999999974 32100 001122233344567899999998 777877778889
Q ss_pred EEEECCCCCeeEEEEecCCCCCEEEEEEc-CCCCcEEEEEeCC
Q 010769 430 KLWDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSK 471 (502)
Q Consensus 430 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~s-pd~~~llasg~~d 471 (502)
.+||..+++. +..+..+...+++++|. |++..|+++....
T Consensus 223 ~~~d~~tG~~--~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 223 IRLDPVTGKR--LQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp EEECTTTCCE--EEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred EEEcCCCceE--EEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 9999988873 44445555679999998 8888777766544
No 203
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.42 E-value=5.1e-11 Score=117.67 Aligned_cols=230 Identities=8% Similarity=0.012 Sum_probs=153.9
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+++++++++...++.|++|++....... .... ..... ++|++++ ..|+++
T Consensus 139 d~~g~lyv~d~~~~~I~~id~~~g~~~~---------------------------~~~~-~~~~~-ia~~~~g-~~l~~~ 188 (409)
T 3hrp_A 139 VGNNTVLAYQRDDPRVRLISVDDNKVTT---------------------------VHPG-FKGGK-PAVTKDK-QRVYSI 188 (409)
T ss_dssp CSTTEEEEEETTTTEEEEEETTTTEEEE---------------------------EEET-CCBCB-CEECTTS-SEEEEE
T ss_pred eCCCCEEEEecCCCcEEEEECCCCEEEE---------------------------eecc-CCCCc-eeEecCC-CcEEEE
Confidence 7889988888888999999986422110 0011 12233 8999994 477777
Q ss_pred ecCC--cEEEEECCCCeeeEEe----ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc----eEeecCCe
Q 010769 286 SADK--QVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF----KWAVAADV 355 (502)
Q Consensus 286 s~Dg--~v~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~----~~~~~~~v 355 (502)
..++ .|.+|+...+.....+ ......+.+++++|++..+ +.+..++.|+.||..+...... ........
T Consensus 189 d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~l-yv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~ 267 (409)
T 3hrp_A 189 GWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWL-YFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTN 267 (409)
T ss_dssp BSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEE-EEECTTCEEEEEETTTCCEEEEEECCCCSCCCCS
T ss_pred ecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeE-EEEECCCcEEEEECCCCCEEEEecccccCCCCCC
Confidence 7755 7999998766543333 2245678899999955254 4477788999999986653221 11111111
Q ss_pred -E-EEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC---------------CCCeeEEEEcCCCCC
Q 010769 356 -E-SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH---------------DKAVCTISYNPLVPN 418 (502)
Q Consensus 356 -~-~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~sp~~~~ 418 (502)
. .++|+|.+..++++...++.|+.|+.... +..+.++ -.....++++|++ .
T Consensus 268 P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~-----------~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~ 335 (409)
T 3hrp_A 268 PGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE-----------CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-N 335 (409)
T ss_dssp SCCEEEEETTTTEEEEEETTTTEEEEECTTCC-----------EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-C
T ss_pred ccccEEEeCCCCEEEEEeCCCCEEEEEecCCC-----------EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-C
Confidence 2 89999976667777778899999987632 2222222 1347899999998 7
Q ss_pred EEEEEe-CCCcEEEEECCCCCeeEEEEecC------------CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 419 LLATGS-TDKMVKLWDLSNNQPSCIASRNP------------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 419 ~l~t~s-~dg~i~vwd~~~~~~~~~~~~~~------------~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
++++-+ .++.|+.|++.++....+..... .......+++++++. ++++-..+++|+.+.+
T Consensus 336 lyvad~~~~~~I~~~~~~~G~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g~-lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGYVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEGG-YWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTEEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSSE-EEEEESTTCEEEEEEE
T ss_pred EEEEeCCCCCEEEEEECCCCEEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCCC-EEEEECCCCeEEEEEe
Confidence 888877 88999999987776333322210 124588999999976 6887778888888765
No 204
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.40 E-value=9.5e-12 Score=120.42 Aligned_cols=173 Identities=14% Similarity=0.115 Sum_probs=129.6
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCe-----------eeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEE
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGK-----------CNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM 336 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~-----------~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v 336 (502)
.+..|++++. ..++++|+.+ .+++|++...+ ....+ .+.. |+.|+| ++ .+|+++ .++.|++
T Consensus 39 ~~nlLais~~-~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNS-KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETT-TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEEE
T ss_pred cccEEEEcCC-CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEEE
Confidence 6899999999 5588888887 46669875432 11222 3556 999999 66 788888 8899999
Q ss_pred EeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC
Q 010769 337 KDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 337 wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
||+++.........+...+.++.+.+. .+++++.+|.|.+||+... ... . +...|+|++|+|.|
T Consensus 111 ~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~---------~~~-~---~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 111 LDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTK---------STK-Q---LAQNVTSFDVTNSQ 174 (388)
T ss_dssp EESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTC---------CEE-E---EEESEEEEEECSSE
T ss_pred EEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCC---------ccc-c---ccCCceEEEEcCCc
Confidence 999987655445566777888887763 2888899999999999976 222 1 44689999999976
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeeEEEEe------c---CCCCCEEEEEEcCCCCcEEEE
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQPSCIASR------N---PKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~~~~~~~------~---~~~~~v~~~~~spd~~~llas 467 (502)
++.|..||++++|+...........+ . +|...|.++.|.+++.++++-
T Consensus 175 ---~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y 231 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVF 231 (388)
T ss_dssp ---EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEE
T ss_pred ---eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEE
Confidence 67899999999998877652112233 2 367889999999999875443
No 205
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.38 E-value=9.5e-10 Score=103.28 Aligned_cols=229 Identities=9% Similarity=0.027 Sum_probs=156.9
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
.++|++.++...++.|.+|+.. ... .. .....+...+.++++.++ ++++++.
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~-~~~-~~-------------------------~~~~~~~~~~~~i~~~~~-g~l~v~~ 79 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQS-GRI-KE-------------------------FEVPTPDAKVMCLIVSSL-GDIWFTE 79 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTT-SCE-EE-------------------------EECSSTTCCEEEEEECTT-SCEEEEE
T ss_pred CCCCCEEEEcCCCCeEEEECCC-Cce-EE-------------------------EECCCCCCcceeEEECCC-CCEEEEe
Confidence 6788888887778999999875 211 10 011123457889999988 4566666
Q ss_pred ecCCcEEEEECCCCeeeE-EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe-ecCCeEEEEeCCC
Q 010769 286 SADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA-VAADVESLAWDPH 363 (502)
Q Consensus 286 s~Dg~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~-~~~~v~~v~~~p~ 363 (502)
..++.|.+||.. ++... .+......+.++++.+++ .++++...++.|..++.. +........ ....+..+++.++
T Consensus 80 ~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~ 156 (300)
T 2qc5_A 80 NGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSD 156 (300)
T ss_dssp TTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTT
T ss_pred cCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCEEEccCCCCCCCceeEEECCC
Confidence 667899999988 55432 223244678999999988 777777668899999986 333221111 2356889999997
Q ss_pred CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010769 364 AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 364 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
+. ++++...++.|..|+. .+. ........+...+.++++.+++ .+.++....+.|.+|+. +++.. ..
T Consensus 157 g~-l~v~~~~~~~i~~~~~-~g~--------~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~-~g~~~-~~ 223 (300)
T 2qc5_A 157 NA-LWFTENQNNSIGRITN-TGK--------LEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITT-TGEIS-EY 223 (300)
T ss_dssp SS-EEEEETTTTEEEEECT-TCC--------EEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCEE-EE
T ss_pred CC-EEEEecCCCeEEEECC-CCc--------EEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcC-CCcEE-EE
Confidence 65 6666666789999998 331 1122223344578899999987 77777666778999998 44422 22
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
....+...+.++++++++. ++++...++.|..|+.
T Consensus 224 ~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~ 258 (300)
T 2qc5_A 224 DIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN 258 (300)
T ss_dssp ECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT
T ss_pred ECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC
Confidence 3334456789999999998 5666656789999998
No 206
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.38 E-value=5.9e-11 Score=114.89 Aligned_cols=175 Identities=13% Similarity=0.133 Sum_probs=125.1
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
++...+|++|+.+ .+.||++....... .......... ....+.. |+.|+| + +++|+++
T Consensus 46 s~~~gll~a~~~~-~l~v~~~~~l~~~~----------------~~~~~~~~~~-~~~~lp~-V~~l~f--d-~~~L~v~ 103 (388)
T 1xip_A 46 SNSKSLFVAASGS-KAVVGELQLLRDHI----------------TSDSTPLTFK-WEKEIPD-VIFVCF--H-GDQVLVS 103 (388)
T ss_dssp ETTTTEEEEEETT-EEEEEEHHHHHHHH----------------HSSSCCCCCS-EEEECTT-EEEEEE--E-TTEEEEE
T ss_pred cCCCCEEEEeCCC-EEEEEEhhHhhhhh----------------ccccccccce-EEeeCCC-eeEEEE--C-CCEEEEE
Confidence 6788899999887 55569875322000 0000001110 1123556 999999 5 5688888
Q ss_pred ecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCC
Q 010769 286 SADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 286 s~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 365 (502)
.++.|++||+.+......+..|...+.++.+.+. .+++++.||.|.+||+...... .+...|+|++|+|.|
T Consensus 104 -~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~~----~~~~~Vs~v~WSpkG- 174 (388)
T 1xip_A 104 -TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKSTK----QLAQNVTSFDVTNSQ- 174 (388)
T ss_dssp -ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCEE----EEEESEEEEEECSSE-
T ss_pred -cCCcEEEEEchhhhccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCccc----cccCCceEEEEcCCc-
Confidence 8899999999877665666677888988887754 2888899999999999876643 255689999999976
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCCCCCCCc--cEEE------e---cCCCCeeEEEEcCCCCCEEEEE
Q 010769 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS--SFTL------H---AHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 366 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~------~---~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
+++|..||.+++|+.... .. ...+ . +|...|.+|.|.+++ .++++-
T Consensus 175 --~~vg~~dg~i~~~~~~~~---------~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 175 --LAVLLKDRSFQSFAWRNG---------EMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp --EEEEETTSCEEEEEEETT---------EEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred --eEEEEcCCcEEEEcCCCc---------cccccceecCCcccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 678999999999988764 21 2333 2 378899999999987 666663
No 207
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.36 E-value=1.8e-10 Score=112.96 Aligned_cols=293 Identities=12% Similarity=0.070 Sum_probs=175.9
Q ss_pred CCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec----------CC
Q 010769 149 PNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------ME 218 (502)
Q Consensus 149 p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~----------~d 218 (502)
|+++.+.++........-.|++++.... .+...+.+...| .+.+ +|+|++|.++. .+
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~-----~vv~~I~vG~~P-gia~-------SpDgk~lyVan~~~~~~~~G~~~ 148 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTG-----RILGMTDGGFLP-HPVA-------AEDGSFFAQASTVFERIARGKRT 148 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTT-----EEEEEEEECSSC-EEEE-------CTTSSCEEEEEEEEEETTEEEEE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCC-----EEEEEEECCCCC-ceEE-------CCCCCEEEEEeccccccccCCCC
Confidence 5556565555421000027777776644 233444555556 5555 89999988886 36
Q ss_pred CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcEEEEEC
Q 010769 219 PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKIWDV 296 (502)
Q Consensus 219 g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v~vwd~ 296 (502)
+.|.++|..+......+.+-+. + .+ ........+.|+|+++ +|+.+.. +++|.+.|+
T Consensus 149 ~~VsviD~~t~~vv~~I~v~g~---------------~----r~-~~g~~P~~~~~spDGk-~lyV~n~~~~~~VsVID~ 207 (426)
T 3c75_H 149 DYVEVFDPVTFLPIADIELPDA---------------P----RF-LVGTYQWMNALTPDNK-NLLFYQFSPAPAVGVVDL 207 (426)
T ss_dssp EEEEEECTTTCCEEEEEEETTC---------------C----CC-CBSCCGGGSEECTTSS-EEEEEECSSSCEEEEEET
T ss_pred CEEEEEECCCCcEEEEEECCCc---------------c----cc-ccCCCcceEEEcCCCC-EEEEEecCCCCeEEEEEC
Confidence 7899999986544332221100 0 00 0112356789999955 6666653 689999999
Q ss_pred CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc---eEee-cCC-eEEEEeCCCCCCEEEEE
Q 010769 297 AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---KWAV-AAD-VESLAWDPHAEHSFVVS 371 (502)
Q Consensus 297 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~~-~~~-v~~v~~~p~~~~~l~~~ 371 (502)
.+++.+.++..-. . ....|.+...+++.+.||.+.+.++...+.... .+.. ..+ ...+.|.+++.. ++..
T Consensus 208 ~t~kvv~~I~v~g--~--~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~-~~~~ 282 (426)
T 3c75_H 208 EGKTFDRMLDVPD--C--YHIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGR-LVWP 282 (426)
T ss_dssp TTTEEEEEEECCS--E--EEEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCE-EEEE
T ss_pred CCCeEEEEEEcCC--c--eeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCE-EEEE
Confidence 9999988886321 1 334455556777888888888888844433210 0101 011 123467887764 4444
Q ss_pred eCCCeEEEEECCCCCCCCCCCCCCccEEEe--------cCCCCeeEEEEcCCCCCEEEEEe---------CCCcEEEEEC
Q 010769 372 LEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--------AHDKAVCTISYNPLVPNLLATGS---------TDKMVKLWDL 434 (502)
Q Consensus 372 ~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~~~~~l~t~s---------~dg~i~vwd~ 434 (502)
+..+.|.+.|+....... ...+.+. ........++++|++.+++++.. ..+.|.++|+
T Consensus 283 s~~g~V~ViD~~~~~~~v-----~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~ 357 (426)
T 3c75_H 283 TYTGKIFQADLTAEGATF-----RAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNA 357 (426)
T ss_dssp BTTSEEEEEEECSSCEEE-----CCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEET
T ss_pred eCCCcEEEEeccCCceEE-----eeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEEC
Confidence 567899999986541100 0001110 01112234689999845555433 1357999999
Q ss_pred CCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCcccccc
Q 010769 435 SNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 435 ~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~-~dg~i~vwd~~~~~~~~~~ 488 (502)
.+.+........ ....++.|+|+++.+++++. .++.|.|+|+.+++.++++
T Consensus 358 ~T~kvv~~I~vg---~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 358 ETGERINKIELG---HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp TTCCEEEEEEEE---EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CCCeEEEEEECC---CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 999843333322 24788999999983355555 6899999999999998775
No 208
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.34 E-value=5.1e-10 Score=106.10 Aligned_cols=243 Identities=10% Similarity=0.113 Sum_probs=150.9
Q ss_pred ccccccccCCCceEEE-------EEecCCcceeEEEEEecCCCCCCceeeeec---cccCCCcceeeeecCCCCCCCC-C
Q 010769 141 DLEDMTINPNDAVIVC-------ARNEDDVSHLEVYILEESDGGDPNLYVHHH---IIIPAFPLCMAWLDCPLKDREK-G 209 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~-------~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~---~~~~~~~~~~~w~~~~~~~s~~-~ 209 (502)
...+++|.|+++++++ +...+ .|+.|+.... .+..... ......|.++.+ +++ +
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~-----~i~~~d~~~g---~~~~~~~~~~~~~~~~~~~i~~-------~~~~g 83 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAG-----EILRIDLKTG---KKTVICKPEVNGYGGIPAGCQC-------DRDAN 83 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECC-----EEEEECTTTC---CEEEEECCEETTEECCEEEEEE-------CSSSS
T ss_pred CccCceECCCCCEEEEEeccccCCCCCC-----EEEEEeCCCC---cEEEEEecccCCCCCCCceEEE-------ecCCC
Confidence 4567889999988887 45555 7777875443 2221111 001234455555 677 6
Q ss_pred CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC-
Q 010769 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD- 288 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D- 288 (502)
+++++.. .+.|.+|+.. +... ... .. .....+...+.++++.+++ +++++...+
T Consensus 84 ~l~v~~~-~~~l~~~d~~-g~~~-~~~-~~--------------------~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~ 138 (314)
T 1pjx_A 84 QLFVADM-RLGLLVVQTD-GTFE-EIA-KK--------------------DSEGRRMQGCNDCAFDYEG-NLWITAPAGE 138 (314)
T ss_dssp EEEEEET-TTEEEEEETT-SCEE-ECC-SB--------------------CTTSCBCBCCCEEEECTTS-CEEEEECBCB
T ss_pred cEEEEEC-CCCEEEEeCC-CCEE-EEE-ec--------------------cCCCccccCCcCEEECCCC-CEEEEecCcc
Confidence 6555554 3478889876 3211 000 00 0001123468899999984 566666554
Q ss_pred --------------CcEEEEECCCCeeeEEeccCCCCeEEEEEc----CCCCcEEEEEECCCcEEEEeCC-CCCCcc--c
Q 010769 289 --------------KQVKIWDVAAGKCNLTLEHHTDKVQAVAWN----HHSPQILLSGSFDRSVVMKDAR-ISTHSG--F 347 (502)
Q Consensus 289 --------------g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~----~~~~~~l~s~~~dg~i~vwd~~-~~~~~~--~ 347 (502)
+.|..|+.. ++..... .+......++|+ |++..++++...++.|.+|++. .+.... .
T Consensus 139 ~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~ 216 (314)
T 1pjx_A 139 VAPADYTRSMQEKFGSIYCFTTD-GQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKV 216 (314)
T ss_dssp CTTSCCCBTTSSSCEEEEEECTT-SCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEE
T ss_pred cccccccccccCCCCeEEEECCC-CCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceE
Confidence 567777765 5543332 234457889999 9883344555568899999986 222111 1
Q ss_pred eEeec----CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCC-EEEE
Q 010769 348 KWAVA----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN-LLAT 422 (502)
Q Consensus 348 ~~~~~----~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~t 422 (502)
..... ..+..+++++++. ++++...++.|.+||..++ ..+..+..+...+.+++|+|++ + ++++
T Consensus 217 ~~~~~~~~~~~p~~i~~d~~G~-l~v~~~~~~~i~~~d~~~g---------~~~~~~~~~~~~~~~i~~~~dg-~~l~v~ 285 (314)
T 1pjx_A 217 WGHIPGTHEGGADGMDFDEDNN-LLVANWGSSHIEVFGPDGG---------QPKMRIRCPFEKPSNLHFKPQT-KTIFVT 285 (314)
T ss_dssp EEECCCCSSCEEEEEEEBTTCC-EEEEEETTTEEEEECTTCB---------SCSEEEECSSSCEEEEEECTTS-SEEEEE
T ss_pred EEECCCCCCCCCCceEECCCCC-EEEEEcCCCEEEEEcCCCC---------cEeEEEeCCCCCceeEEECCCC-CEEEEE
Confidence 11111 4578899999864 6666667889999998755 4455566666789999999998 6 5556
Q ss_pred EeCCCcEEEEECCC
Q 010769 423 GSTDKMVKLWDLSN 436 (502)
Q Consensus 423 ~s~dg~i~vwd~~~ 436 (502)
...++.|..|++..
T Consensus 286 ~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 286 EHENNAVWKFEWQR 299 (314)
T ss_dssp ETTTTEEEEEECSS
T ss_pred eCCCCeEEEEeCCC
Confidence 66678899999865
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.33 E-value=2.4e-10 Score=122.11 Aligned_cols=249 Identities=12% Similarity=0.054 Sum_probs=154.8
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCC-cceeeeecCCCCCCCCCCEEEEecCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAF-PLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~w~~~~~~~s~~~~~la~g~~d 218 (502)
..+..+.|+|+|++||.+...+..-...||+++...+ .....+ ++.. ...+.| +|+ +.|+.++.+
T Consensus 163 ~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg---~~~~~~---~~~~~~~~~~w-------spD-~~l~~~~~~ 228 (741)
T 1yr2_A 163 TALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADG---KPLADE---LKWVKFSGLAW-------LGN-DALLYSRFA 228 (741)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTC---CEEEEE---EEEEESCCCEE-------STT-SEEEEEECC
T ss_pred EEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCC---CCCCcc---CCCceeccEEE-------ECC-CEEEEEEec
Confidence 4678899999999999987664332356777776665 322111 1110 123445 899 988888776
Q ss_pred Cc--------------EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 219 PA--------------IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 219 g~--------------I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+. |++|++.+..... ........|...+.++.|+|++. +|+.
T Consensus 229 ~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------------------~lv~~~~~~~~~~~~~~~SpDG~-~l~~ 284 (741)
T 1yr2_A 229 EPKEGQAFQALNYNQTVWLHRLGTPQSAD-----------------------QPVFATPELPKRGHGASVSSDGR-WVVI 284 (741)
T ss_dssp CC--------CCCCCEEEEEETTSCGGGC-----------------------EEEECCTTCTTCEEEEEECTTSC-EEEE
T ss_pred CcccccccccCCCCCEEEEEECCCCchhC-----------------------EEEeccCCCCeEEEEEEECCCCC-EEEE
Confidence 54 8888875432110 11112223444688999999955 5665
Q ss_pred EecC-----CcEEEEECCCC--eeeEEeccCCCCeEEEEEcCCCCcEEEEEEC----CCcEEEEeCCCCC-CccceEe-e
Q 010769 285 ASAD-----KQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQILLSGSF----DRSVVMKDARIST-HSGFKWA-V 351 (502)
Q Consensus 285 gs~D-----g~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~----dg~i~vwd~~~~~-~~~~~~~-~ 351 (502)
.+.+ ..|++||+.++ ++...+..+...+....+ |++ ..|+..+. ++.|.+|++.++. ....... .
T Consensus 285 ~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~-~dg-~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~ 362 (741)
T 1yr2_A 285 TSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVD-GVG-DQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES 362 (741)
T ss_dssp EEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEE-EET-TEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC
T ss_pred EEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEe-ccC-CEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC
Confidence 5544 38999999877 314555555555555544 777 55555554 3459999988742 2222222 2
Q ss_pred cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeC---CC
Q 010769 352 AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
...+..+.|. +..++++...++..++|.+... ......+.. +...+..++++|++..++++.+. .+
T Consensus 363 ~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~--------g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~ 432 (741)
T 1yr2_A 363 KDNLESVGIA--GNRLFASYIHDAKSQVLAFDLD--------GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPA 432 (741)
T ss_dssp SSEEEEEEEE--BTEEEEEEEETTEEEEEEEETT--------SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEE
T ss_pred CCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCC--------CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCC
Confidence 3346677776 4557888888998777765422 133444443 35678899999988555555443 47
Q ss_pred cEEEEECCCCC
Q 010769 428 MVKLWDLSNNQ 438 (502)
Q Consensus 428 ~i~vwd~~~~~ 438 (502)
+|++||+.+++
T Consensus 433 ~i~~~d~~tg~ 443 (741)
T 1yr2_A 433 TVLALDPATAK 443 (741)
T ss_dssp EEEEEETTTTE
T ss_pred EEEEEECCCCc
Confidence 89999998876
No 210
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.30 E-value=1.9e-10 Score=121.79 Aligned_cols=236 Identities=15% Similarity=0.100 Sum_probs=148.5
Q ss_pred CCCCCEEEEe-----cCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCc
Q 010769 206 REKGNFMAVG-----SMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRN 280 (502)
Q Consensus 206 s~~~~~la~g-----~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~ 280 (502)
||+|++||.+ +....|+|||+.++..+.. . .+......++|+ ++ .
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~--------------------------~--~~~~k~~~~~Ws-Dg-~ 186 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLET--------------------------P--LKDVKFSGISWL-GN-E 186 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEE--------------------------E--EEEEESCCCEEE-TT-T
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCcc--------------------------c--cCCceeccEEEe-CC-C
Confidence 8999999953 3336799999986542110 0 011113578899 85 4
Q ss_pred EEEEEecCC-------------cEEEEECCCCe----eeEEecc-CCCCeEEEEEcCCCCcEEEEEEC---CCcEEEEeC
Q 010769 281 ILASASADK-------------QVKIWDVAAGK----CNLTLEH-HTDKVQAVAWNHHSPQILLSGSF---DRSVVMKDA 339 (502)
Q Consensus 281 ~l~sgs~Dg-------------~v~vwd~~~~~----~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~---dg~i~vwd~ 339 (502)
.|+.++.+. .|++|++.++. ++..... |...+.++.|+|++..++++.+. .+.|.++|+
T Consensus 187 ~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~ 266 (693)
T 3iuj_A 187 GFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDL 266 (693)
T ss_dssp EEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEET
T ss_pred EEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEEC
Confidence 666666664 39999998764 3333344 55567899999999545455543 258999999
Q ss_pred CCCCC-ccceEeecCCeEEEEeCCCCCCEEEEEeCC---CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 340 RISTH-SGFKWAVAADVESLAWDPHAEHSFVVSLED---GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 340 ~~~~~-~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d---g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
.++.. .............. |++++..+++.+..+ +.|..+++.+.. ......+..|...+. .|+++
T Consensus 267 ~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~-------~~~~~~l~~~~~~~~--~~s~~ 336 (693)
T 3iuj_A 267 SQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPG-------PAHWRDLIPERQQVL--TVHSG 336 (693)
T ss_dssp TSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCC-------GGGCEEEECCCSSCE--EEEEE
T ss_pred CCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCC-------ccccEEEecCCCCEE--EEEEE
Confidence 87642 22233333444444 666677666666543 679999998752 112345666666655 88888
Q ss_pred CCCEEEEEeCCC--cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC---CcEEEEECCCCc
Q 010769 416 VPNLLATGSTDK--MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK---GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~dg--~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d---g~i~vwd~~~~~ 483 (502)
+..++++...++ .|++|++..... ....+ ...+.+..+.+++++..++++.++. +.|+.||+.+++
T Consensus 337 g~~lv~~~~~~g~~~l~~~d~~g~~~-~~l~~-p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 337 SGYLFAEYMVDATARVEQFDYEGKRV-REVAL-PGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp TTEEEEEEEETTEEEEEEECTTSCEE-EEECC-SSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCC
T ss_pred CCEEEEEEEECCeeEEEEEECCCCee-EEeec-CCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCe
Confidence 844444444555 588999875542 22222 2446688888899988655554432 789999997765
No 211
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.28 E-value=3.3e-09 Score=101.42 Aligned_cols=223 Identities=12% Similarity=0.049 Sum_probs=141.2
Q ss_pred CCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+|+ +.+++++...+.|.+|+...... . .. .+...+.+++|++++ .++++
T Consensus 57 ~~~~~~l~~~d~~~~~i~~~d~~~~~~------------------------~--~~---~~~~~v~~i~~~~dg-~l~v~ 106 (326)
T 2ghs_A 57 DPASGTAWWFNILERELHELHLASGRK------------------------T--VH---ALPFMGSALAKISDS-KQLIA 106 (326)
T ss_dssp ETTTTEEEEEEGGGTEEEEEETTTTEE------------------------E--EE---ECSSCEEEEEEEETT-EEEEE
T ss_pred eCCCCEEEEEECCCCEEEEEECCCCcE------------------------E--EE---ECCCcceEEEEeCCC-eEEEE
Confidence 565 66777777789999999864211 0 00 123568999999994 45554
Q ss_pred EecCCcEEEEECCCCeeeEEecc----CCCCeEEEEEcCCCCcEEEEEEC------CCcEEEEeCCCCCCccceEeecCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLSGSF------DRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s~~~------dg~i~vwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.+||..+++....... ....+..+.++|+| +++++... .+.|..++ .++. .........
T Consensus 107 -~~-~gl~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~ 180 (326)
T 2ghs_A 107 -SD-DGLFLRDTATGVLTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISI 180 (326)
T ss_dssp -ET-TEEEEEETTTCCEEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESS
T ss_pred -EC-CCEEEEECCCCcEEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcc
Confidence 44 4599999988875433221 12358899999999 66555432 24555555 3322 222233345
Q ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEECC--CC-CCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEE
Q 010769 355 VESLAWDPHAEHSFVVSLEDGTIKGFDIR--TA-KSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKL 431 (502)
Q Consensus 355 v~~v~~~p~~~~~l~~~~~dg~i~i~d~~--~~-~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~v 431 (502)
...++|+|++..++++.+.++.|.+|++. ++ .... ......+........++++.++| .+.++....+.|.+
T Consensus 181 ~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~----~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~ 255 (326)
T 2ghs_A 181 PNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGK----AEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDR 255 (326)
T ss_dssp EEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSC----CEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEE
T ss_pred cCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccC----ceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEE
Confidence 78899999987555666678899999986 32 1100 01122222334567889999988 77776666788999
Q ss_pred EECCCCCeeEEEEecCCCCCEEEEEEc-CCCCcEEEEEeCCC
Q 010769 432 WDLSNNQPSCIASRNPKAGAVFSVAFS-EDSPFVLAIGGSKG 472 (502)
Q Consensus 432 wd~~~~~~~~~~~~~~~~~~v~~~~~s-pd~~~llasg~~dg 472 (502)
|+. +++ .+..+..+...+++++|+ |++..++++....+
T Consensus 256 ~d~-~g~--~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 256 YDT-DGN--HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp ECT-TCC--EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred ECC-CCC--EEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 998 454 233444455679999998 88886666655553
No 212
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.27 E-value=1e-09 Score=116.28 Aligned_cols=254 Identities=12% Similarity=0.103 Sum_probs=159.0
Q ss_pred CccccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCC-cceeeeecCCCCCCCCCCEEEEec
Q 010769 138 DSEDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAF-PLCMAWLDCPLKDREKGNFMAVGS 216 (502)
Q Consensus 138 ~~~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~w~~~~~~~s~~~~~la~g~ 216 (502)
+...+..+.|||+|++||.+...+..-...||+++...+ .....+ ++.. ...+.| + |++.|+.++
T Consensus 127 ~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg---~~~~~~---~~~~k~~~~~W-------s-Dg~~l~y~~ 192 (693)
T 3iuj_A 127 GTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK---QPLETP---LKDVKFSGISW-------L-GNEGFFYSS 192 (693)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC---SEEEEE---EEEEESCCCEE-------E-TTTEEEEEE
T ss_pred CcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC---CCCccc---cCCceeccEEE-------e-CCCEEEEEE
Confidence 445678889999999999877544332357777776655 322111 1111 123445 8 899999888
Q ss_pred CCC-------------cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCC-cccceeeEEecCCCCcEE
Q 010769 217 MEP-------------AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNKEFRNIL 282 (502)
Q Consensus 217 ~dg-------------~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~~l 282 (502)
.+. .|++|++.+..... ........ |...+.++.|+|+++.++
T Consensus 193 ~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~-----------------------~~v~~~~~~~~~~~~~~~~SpDg~~l~ 249 (693)
T 3iuj_A 193 YDKPDGSELSARTDQHKVYFHRLGTAQEDD-----------------------RLVFGAIPAQHHRYVGATVTEDDRFLL 249 (693)
T ss_dssp SSCCC-------CCCCEEEEEETTSCGGGC-----------------------EEEESCSGGGCCSEEEEEECTTSCEEE
T ss_pred ecCcccccccccCCCcEEEEEECCCCcccc-----------------------eEEEecCCCCCeEEEEEEEcCCCCEEE
Confidence 774 38888886432111 11122223 455678899999976555
Q ss_pred EEEecC---CcEEEEECCCCe-eeEEeccCCCCeEEEEEcCCCCcEEEEEECC---CcEEEEeCCCCCCc--cceEeecC
Q 010769 283 ASASAD---KQVKIWDVAAGK-CNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---RSVVMKDARISTHS--GFKWAVAA 353 (502)
Q Consensus 283 ~sgs~D---g~v~vwd~~~~~-~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g~i~vwd~~~~~~~--~~~~~~~~ 353 (502)
++.+.+ ..|++||+.++. ....+..+....... |++++..+++++..+ +.|.++++.++... .....+..
T Consensus 250 ~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 250 ISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp EEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred EEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 555432 589999998763 345555566666555 666665666666554 67999999876541 22344444
Q ss_pred CeEEEEeCCCCCCEEEEEeCCC--eEEEEECCCCCCCCCCCCCCccEEEe-cCCCCeeEEEEcCCCCCEEEEEeC---CC
Q 010769 354 DVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLH-AHDKAVCTISYNPLVPNLLATGST---DK 427 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~t~s~---dg 427 (502)
.+. .|++++..++++...+| .|++|++... ....+. ...+.+..+.+++++..++++.+. -+
T Consensus 329 ~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~----------~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~ 396 (693)
T 3iuj_A 329 QVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK----------RVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPP 396 (693)
T ss_dssp SCE--EEEEETTEEEEEEEETTEEEEEEECTTSC----------EEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCC
T ss_pred CEE--EEEEECCEEEEEEEECCeeEEEEEECCCC----------eeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCC
Confidence 454 88888776666666666 5888887643 223332 234567778888888566665543 27
Q ss_pred cEEEEECCCCCeeE
Q 010769 428 MVKLWDLSNNQPSC 441 (502)
Q Consensus 428 ~i~vwd~~~~~~~~ 441 (502)
.|+.||+.+++...
T Consensus 397 ~l~~~d~~~g~~~~ 410 (693)
T 3iuj_A 397 TLYRFEPKSGAISL 410 (693)
T ss_dssp EEEEECTTTCCEEE
T ss_pred EEEEEECCCCeEEE
Confidence 89999998876433
No 213
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.25 E-value=4.3e-10 Score=108.45 Aligned_cols=282 Identities=13% Similarity=0.054 Sum_probs=165.8
Q ss_pred ccccccccCCCceEEEEEe-cCCcceeEEEEEecCCCCCCceeeee-----ccccCCCcceeeeecCCCCCCCCCCEEEE
Q 010769 141 DLEDMTINPNDAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHH-----HIIIPAFPLCMAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~-----~~~~~~~~~~~~w~~~~~~~s~~~~~la~ 214 (502)
..+.++++|+|+++++... .+.. ..||.++ .+ .+...- ....-..|.++.+ +++++++++
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~--~~l~~~~--~g---~~~~~p~~~~~~~~~~~~p~gv~~-------d~~g~L~v~ 83 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPE--MQVAELT--QD---GLIPFPPQSGNAIITFDTVLGIKS-------DGNGIVWML 83 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCS--CSEEEEE--TT---EEEESCCCCSSCCCCCSCEEEEEE-------CSSSEEEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCc--eEEEEEC--CC---CeecCCCcccCcccceeEeeEEEE-------cCCCcEEEE
Confidence 5678899999999888642 2211 5677776 22 222110 0000122344444 678887776
Q ss_pred ecC-----CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe---
Q 010769 215 GSM-----EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS--- 286 (502)
Q Consensus 215 g~~-----dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs--- 286 (502)
-.. .+.|.+||+.++.....+. +. .....+...+..+++.++++.++++.+
T Consensus 84 D~g~~~~~~~~i~~~d~~tg~~~~~~~-~~--------------------~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~ 142 (343)
T 2qe8_A 84 DNGNQSKSVPKLVAWDTLNNQLSRVIY-LP--------------------PPITLSNSFVNDLAVDLIHNFVYISDPAPD 142 (343)
T ss_dssp ECHHHHTSCCEEEEEETTTTEEEEEEE-CC--------------------TTTSCTTCCCCEEEEETTTTEEEEEECCSG
T ss_pred cCCCCcCCCCeEEEEECCCCeEEEEEE-CC--------------------hhhcccccccceEEEecCCCEEEEEcCccC
Confidence 543 5789999987543221110 00 001123356789999986565666666
Q ss_pred cCCcEEEEECCCCeeeEEeccCCCCeE-EEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCC
Q 010769 287 ADKQVKIWDVAAGKCNLTLEHHTDKVQ-AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 287 ~Dg~v~vwd~~~~~~~~~~~~h~~~v~-~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 365 (502)
.++.|.+||+.+++..+.+.+|..... ...+.+++ ..+.+.+.++.+..|. ..+..++|+|++.
T Consensus 143 ~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g-~~~~~~~~~g~~~~~~--------------~~~~gia~s~dg~ 207 (343)
T 2qe8_A 143 DKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDG-VPVQIGQPDGTVIRPH--------------LGVNGIVLDAENE 207 (343)
T ss_dssp GGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETT-EECBEECTTSCEECCC--------------CCEEEEEECTTSC
T ss_pred CCCeEEEEECCCCCEEEEecCCCcccccccceeECC-EEEEeccCCCceecee--------------cccceeEeccCCC
Confidence 688999999998887777765432111 12334455 5566667777765543 2357799999876
Q ss_pred CEEEEEeCC-CeEEEEECCCCCCCCCCCCCC--ccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010769 366 HSFVVSLED-GTIKGFDIRTAKSDPDSTSQQ--SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 366 ~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~--~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
.++++... ..|..++........ ..... ......++......++++++| .++++...++.|.+||..+++...+
T Consensus 208 -~ly~~~~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~~~g~~g~pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~~~~ 284 (343)
T 2qe8_A 208 -WLYLSPMHSTSMYRIKSADLSNLQ-LTDAELGSKIERYSEKPICDGISIDKDH-NIYVGDLAHSAIGVITSADRAYKLL 284 (343)
T ss_dssp -EEEEEESSCSEEEEEEHHHHTCTT-CCHHHHHTTCEEEEECCSCSCEEECTTC-CEEEEEGGGTEEEEEETTTTEEEEE
T ss_pred -EEEEEeCCCCeEEEEEHHHhcCCC-CChhhhhcceEecccCCCCceEEECCCC-CEEEEccCCCeEEEEECCCCCEEEE
Confidence 45555444 466666643110000 00000 011222445567789999997 8888888899999999855553333
Q ss_pred EEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010769 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vw 477 (502)
.. ..+...+.+++|.+++. ++++.+..+.+.+|
T Consensus 285 ~~-~~~~~~p~~va~~~~g~-l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 285 VT-DEKLSWTDSFNFGSDGY-LYFDCNQLHHSAPL 317 (343)
T ss_dssp EE-CGGGSCEEEEEECTTSC-EEEEECCGGGSGGG
T ss_pred EE-CCceecCCeeEECCCCc-EEEEeCcccccccc
Confidence 32 22345689999999987 67776655444333
No 214
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=6e-09 Score=102.78 Aligned_cols=239 Identities=11% Similarity=0.059 Sum_probs=152.2
Q ss_pred cccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 140 EDLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 140 ~~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
.....++|+|+++++++....+ .|+.++.... .+...... ...|. +.| ++++++|+++..++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~-----~I~~id~~~g---~~~~~~~~--~~~~~-ia~-------~~~g~~l~~~d~~~ 192 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDP-----RVRLISVDDN---KVTTVHPG--FKGGK-PAV-------TKDKQRVYSIGWEG 192 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTT-----EEEEEETTTT---EEEEEEET--CCBCB-CEE-------CTTSSEEEEEBSST
T ss_pred CCceEEEEeCCCCEEEEecCCC-----cEEEEECCCC---EEEEeecc--CCCCc-eeE-------ecCCCcEEEEecCC
Confidence 3567889999999777776544 7777776544 33222111 11222 444 78899988888766
Q ss_pred --cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECC
Q 010769 220 --AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVA 297 (502)
Q Consensus 220 --~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~ 297 (502)
.|.+|+........ .++ .....+...+.+++++|+++ .|+.+..++.|+.||+.
T Consensus 193 ~~~I~~~d~~~~~~~~---~~g--------------------~~~~~~~~~p~~iav~p~~g-~lyv~d~~~~I~~~d~~ 248 (409)
T 3hrp_A 193 THTVYVYMKASGWAPT---RIG--------------------QLGSTFSGKIGAVALDETEE-WLYFVDSNKNFGRFNVK 248 (409)
T ss_dssp TCEEEEEEGGGTTCEE---EEE--------------------ECCTTSCSCCCBCEECTTSS-EEEEECTTCEEEEEETT
T ss_pred CceEEEEEcCCCceeE---Eee--------------------eccchhcCCcEEEEEeCCCC-eEEEEECCCcEEEEECC
Confidence 67777764211100 000 00011345678999999545 44457778899999998
Q ss_pred CCeeeEE----eccCCCCe--EEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee---------------cCCeE
Q 010769 298 AGKCNLT----LEHHTDKV--QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV---------------AADVE 356 (502)
Q Consensus 298 ~~~~~~~----~~~h~~~v--~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~---------------~~~v~ 356 (502)
++..... ..++...- ..++|+|++..++++-..++.|+.|+.... ....... -....
T Consensus 249 ~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~ 326 (409)
T 3hrp_A 249 TQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPN 326 (409)
T ss_dssp TCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEE
T ss_pred CCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCe
Confidence 7754322 22222222 399999965477777778899999987643 1112221 13478
Q ss_pred EEEeCCCCCCEEEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecC---------------CCCeeEEEEcCCCCCEE
Q 010769 357 SLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH---------------DKAVCTISYNPLVPNLL 420 (502)
Q Consensus 357 ~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h---------------~~~v~~l~~sp~~~~~l 420 (502)
.++++|++. ++++-+ .++.|+.|++..+ .+..+.++ -.....+++++++ .++
T Consensus 327 gia~d~dG~-lyvad~~~~~~I~~~~~~~G----------~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~ly 394 (409)
T 3hrp_A 327 GMTVDEDGN-FYIVDGFKGYCLRKLDILDG----------YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYW 394 (409)
T ss_dssp EEEECTTCC-EEEEETTTTCEEEEEETTTT----------EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEE
T ss_pred EEEEeCCCC-EEEEeCCCCCEEEEEECCCC----------EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEE
Confidence 999999876 677777 7899999997654 23333333 2357889999986 788
Q ss_pred EEEeCCCcEEEEEC
Q 010769 421 ATGSTDKMVKLWDL 434 (502)
Q Consensus 421 ~t~s~dg~i~vwd~ 434 (502)
++-..++.|+.+++
T Consensus 395 Vad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 395 IAEAWGKAIRKYAV 408 (409)
T ss_dssp EEESTTCEEEEEEE
T ss_pred EEECCCCeEEEEEe
Confidence 88888888887764
No 215
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.22 E-value=1.7e-08 Score=98.18 Aligned_cols=241 Identities=10% Similarity=0.011 Sum_probs=147.5
Q ss_pred cccccCCCceEEEEEecCC-----cceeEEEEEecCCCCCCceeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010769 144 DMTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~-----~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~w~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++..... ...=.|.+|+.... .. -....++ ..|..+.| +|+|+
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~---~~--~~~i~~~~~~~~~~g~~p~~~~~-------spDG~ 137 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTF---LP--IADIELPDAPRFDVGPYSWMNAN-------TPNNA 137 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCC---cE--EEEEECCCccccccCCCccceEE-------CCCCC
Confidence 8999999999998863100 00014556665432 21 1212221 23444444 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+|++++. ++.|.++| .+...... . . ... .|+.+.|.+...+++.+.|
T Consensus 138 ~l~v~n~~~~~~v~viD-~t~~~~~~------------------------~--i-~~~---~~~~~~~~~~~~~~~~~~d 186 (373)
T 2mad_H 138 DLLFFQFAAGPAVGLVV-QGGSSDDQ------------------------L--L-SSP---TCYHIHPGAPSTFYLLCAQ 186 (373)
T ss_pred EEEEEecCCCCeEEEEE-CCCCEEeE------------------------E--c-CCC---ceEEEEeCCCceEEEEcCC
Confidence 9999874 47899999 76432111 0 0 011 1244556656677888899
Q ss_pred CcEEEEECCCCeeeEEec-----cCCCCe-EEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEe-----------
Q 010769 289 KQVKIWDVAAGKCNLTLE-----HHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA----------- 350 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~-----~h~~~v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~----------- 350 (502)
|.+.+++. +++.+.... ....++ ....+.+++..++++ +..+.+.+.|+....... ..+.
T Consensus 187 g~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~ 264 (373)
T 2mad_H 187 GGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWP-VYSGKILQADISAAGATNKAPIDALSGGRKADTW 264 (373)
T ss_pred CCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEE-cCCceEEEEeccCCcceEeeeeeecCCcccccce
Confidence 99999999 887663322 111221 234556666344444 467899999987543211 1111
Q ss_pred ecCCeEEEEeCCCCCCEEEEEe---------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEE
Q 010769 351 VAADVESLAWDPHAEHSFVVSL---------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 351 ~~~~v~~v~~~p~~~~~l~~~~---------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
.......+.++|++..++++.. ..+.|.++|+.+. +.+.++.. .....+++|+|++..+++
T Consensus 265 ~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~---------~vv~~i~~-g~~p~~i~~s~Dg~~~l~ 334 (373)
T 2mad_H 265 RPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVG---------QTSSQISL-GHDVDAISVAQDGGPDLY 334 (373)
T ss_pred ecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCC---------EEEEEEEC-CCCcCeEEECCCCCeEEE
Confidence 1223445788998774444432 2357999999886 56666643 345899999999843777
Q ss_pred EEe-CCCcEEEEECCCCCe
Q 010769 422 TGS-TDKMVKLWDLSNNQP 439 (502)
Q Consensus 422 t~s-~dg~i~vwd~~~~~~ 439 (502)
++. .++.|.+||+.+++.
T Consensus 335 v~~~~~~~V~ViD~~t~~v 353 (373)
T 2mad_H 335 ALSAGTEVLHIYDAGAGDQ 353 (373)
T ss_pred EEcCCCCeEEEEECCCCCE
Confidence 776 589999999999884
No 216
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=5.5e-09 Score=98.44 Aligned_cols=208 Identities=9% Similarity=0.051 Sum_probs=137.8
Q ss_pred cccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC
Q 010769 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 344 (502)
+..-.-+..|+++.+.++++....+.|..||..+++. ..+. ....+.++++++++ ++++ +. ++.|.+||..++..
T Consensus 11 ~~~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG-~l~v-~~-~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 11 NCRCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSG-GYVA-TI-GTKFCALNWKEQSA 85 (297)
T ss_dssp CCSBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTS-SEEE-EE-TTEEEEEETTTTEE
T ss_pred CCccccCCeEECCCCEEEEEECCCCEEEEEECCCCcE-EEEe-CCCceEEEEECCCC-CEEE-EE-CCeEEEEECCCCcE
Confidence 3345668899997677888888889999999988765 3333 45689999999999 6444 44 56899999886654
Q ss_pred ccceEee----cCCeEEEEeCCCCCCEEEEEeC---------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEE
Q 010769 345 SGFKWAV----AADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTIS 411 (502)
Q Consensus 345 ~~~~~~~----~~~v~~v~~~p~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 411 (502)
....... ...+..++++|++. ++++... ...-.+|.+... ..+..+..+....+.++
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~---------g~~~~~~~~~~~pngi~ 155 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPD---------HHVKKYFDQVDISNGLD 155 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTT---------SCEEEEEEEESBEEEEE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECC---------CCEEEEeeccccccceE
Confidence 3211111 13478899999876 4443322 122344444322 11222333344568999
Q ss_pred EcCCCCCEEEEEeCCCcEEEEEC--CCCCee---EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 412 YNPLVPNLLATGSTDKMVKLWDL--SNNQPS---CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 412 ~sp~~~~~l~t~s~dg~i~vwd~--~~~~~~---~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
|+|++..++++.+..+.|.+|++ .++... ....+..+.+....++++++|. +.++....+.|.+||..+++.+.
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~-lwva~~~~~~v~~~d~~tG~~~~ 234 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK-LWVACYNGGRVIRLDPVTGKRLQ 234 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC-EEEEEETTTEEEEECTTTCCEEE
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC-EEEEEcCCCEEEEEcCCCceEEE
Confidence 99998445566777889999997 444421 2223333346788999999997 67777777889999998888765
Q ss_pred cc
Q 010769 487 NR 488 (502)
Q Consensus 487 ~~ 488 (502)
.+
T Consensus 235 ~i 236 (297)
T 3g4e_A 235 TV 236 (297)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 217
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.20 E-value=5.9e-09 Score=100.46 Aligned_cols=259 Identities=10% Similarity=0.061 Sum_probs=155.1
Q ss_pred cccccCCCceEEEEEecC-----CcceeEEEEEecCCCCCCceeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010769 144 DMTINPNDAVIVCARNED-----DVSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~-----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~w~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++.... .-..-.|.+|+.... . .-..+.++ ..|..+.+ +|+|+
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~---~--v~~~I~v~~g~r~~~g~~P~~~a~-------spDGk 149 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTL---L--PTADIELPDAPRFLVGTYPWMTSL-------TPDGK 149 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---C--EEEEEEETTCCCCCBSCCGGGEEE-------CTTSS
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---e--EEEEEECCCccccccCCCCceEEE-------cCCCC
Confidence 389999999988775310 000115667776543 2 22222232 24555554 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+|.++.. ++.|.|+|+.+...+..+. ..+ |..+.|.+...+++.+.|
T Consensus 150 ~lyVan~~~~~~VsVID~~t~~vv~tI~-------------------------v~g------~~~~~P~g~~~~~~~~~D 198 (386)
T 3sjl_D 150 TLLFYQFSPAPAVGVVDLEGKAFKRMLD-------------------------VPD------CYHIFPTAPDTFFMHCRD 198 (386)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEE-------------------------CCS------EEEEEEEETTEEEEEETT
T ss_pred EEEEEEcCCCCeEEEEECCCCcEEEEEE-------------------------CCC------cceeecCCCceeEEECCC
Confidence 9988864 6899999997643222110 001 112335545677788899
Q ss_pred CcEEEEECCC-CeeeEEeccC----CCCeE-EEEEc-CCCCcEEEEEECCCcEEEEeCCCCCCc-cceEe----------
Q 010769 289 KQVKIWDVAA-GKCNLTLEHH----TDKVQ-AVAWN-HHSPQILLSGSFDRSVVMKDARISTHS-GFKWA---------- 350 (502)
Q Consensus 289 g~v~vwd~~~-~~~~~~~~~h----~~~v~-~l~~~-~~~~~~l~s~~~dg~i~vwd~~~~~~~-~~~~~---------- 350 (502)
|++.+.++.+ ++...+...+ ..++. ...|. ++| ++++ .+.+|.|++.|+.+.... ...+.
T Consensus 199 G~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG-~~~~-vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g 276 (386)
T 3sjl_D 199 GSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAG-RLVW-PTYTGKIHQIDLSSGDAKFLPAVEALTEAERADG 276 (386)
T ss_dssp SCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTT-EEEE-EBTTSEEEEEECTTSSCEECCCEESSCHHHHHTT
T ss_pred CCEEEEECCCCCeEEEeecceeccccccccccceeEcCCC-cEEE-EeCCCEEEEEECCCCcceeecceecccccccccc
Confidence 9999999976 5543322111 12222 23554 555 5444 666899999999765431 11111
Q ss_pred -ecCCeEEEEeCCCCCCEEEEEeC---------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEE
Q 010769 351 -VAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 351 -~~~~v~~v~~~p~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
.......+++++++..++++... .+.|.++|+.+. +.+..+... ..+.+|++++++..+|
T Consensus 277 ~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~---------kv~~~i~vg-~~~~~lavs~D~~~~l 346 (386)
T 3sjl_D 277 WRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG---------ERLAKFEMG-HEIDSINVSQDEKPLL 346 (386)
T ss_dssp EEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEE-EEECEEEECSSSSCEE
T ss_pred ccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC---------eEEEEEECC-CCcceEEECCCCCeEE
Confidence 12344457778887754444321 257999999987 566665532 3678999999984366
Q ss_pred EEE-eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCC
Q 010769 421 ATG-STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 421 ~t~-s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
+++ ..++.|.++|..+++........+| -+.|.+++|
T Consensus 347 y~tn~~~~~VsViD~~t~k~~~~i~~~~~---p~~l~~s~d 384 (386)
T 3sjl_D 347 YALSTGDKTLYIHDAESGEELRSVNQLGH---GPQVITTAD 384 (386)
T ss_dssp EEEETTTTEEEEEETTTCCEEEEECCCCS---SCCEEEECC
T ss_pred EEEcCCCCeEEEEECCCCcEEEEecCCCC---CceeEECCc
Confidence 554 5589999999999984433333333 334555554
No 218
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.17 E-value=9.4e-10 Score=106.15 Aligned_cols=266 Identities=11% Similarity=-0.025 Sum_probs=159.5
Q ss_pred EEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEec----------CCCcEEEeeCCCCCCCCcee
Q 010769 167 EVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGS----------MEPAIEIWDLDVIDEVQPHV 236 (502)
Q Consensus 167 ~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~----------~dg~I~iwdl~~~~~~~~~~ 236 (502)
.|++++.... . +-+...+...| .+.. +|+++++.++. .++.|.+||+.+......+.
T Consensus 47 ~vsvID~~t~---~--v~~~i~vG~~P-~i~~-------spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCG---V--TLGHSLGAFLS-LAVA-------GHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIE 113 (368)
T ss_dssp EEEEEETTTT---E--EEEEEEECTTC-EEEE-------CTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEE
T ss_pred eEEEEECCCC---e--EEEEEeCCCCC-ceEE-------CCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 7778876654 2 33445555556 5544 89999998886 36889999998765443322
Q ss_pred eeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcEEE--EECCCCeeeEEeccCCCCe
Q 010769 237 ILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQVKI--WDVAAGKCNLTLEHHTDKV 312 (502)
Q Consensus 237 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v~v--wd~~~~~~~~~~~~h~~~v 312 (502)
+-++ .+ .. .......++++|+++ +|+.+.. ...|.+ +|+.+ +..+.. .+.
T Consensus 114 v~~~---------------~~---~~--~g~~P~~ia~SpDGk-~lyVan~~~~~~v~V~~iD~~t---v~~i~v-~~~- 167 (368)
T 1mda_H 114 LPDA---------------PR---FS--VGPRVHIIGNCASSA-CLLFFLFGSSAAAGLSVPGASD---DQLTKS-ASC- 167 (368)
T ss_dssp ETTS---------------CS---CC--BSCCTTSEEECTTSS-CEEEEECSSSCEEEEEETTTEE---EEEEEC-SSC-
T ss_pred CCCc---------------cc---cc--cCCCcceEEEcCCCC-EEEEEccCCCCeEEEEEEchhh---ceEEEC-CCc-
Confidence 1100 00 00 012356899999955 5666653 467888 99877 444431 111
Q ss_pred EEEEEcCCCCcEEEEEECCCcEEEEeCCC-----CCCcc---ceEee-cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECC
Q 010769 313 QAVAWNHHSPQILLSGSFDRSVVMKDARI-----STHSG---FKWAV-AADVESLAWDPHAEHSFVVSLEDGTIKGFDIR 383 (502)
Q Consensus 313 ~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-----~~~~~---~~~~~-~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~ 383 (502)
....|.+...+++.+.||.+.+.++.+ ++... ..+.. ..+. . .+++..++++. . +.|.+.|+.
T Consensus 168 --~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs-~-~~V~viD~~ 239 (368)
T 1mda_H 168 --FHIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAV-A-SSILQGDIP 239 (368)
T ss_dssp --CCCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECB-S-SCCEEEECC
T ss_pred --eEEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEc-C-CEEEEEECC
Confidence 223456656777778889888888876 22211 01111 1222 3 45455444444 4 899999986
Q ss_pred CCCCCCCCCCCCccEEEe-------c---CCCCeeEEEEcCCCCCEEEEEe---C-----CCcEEEEECCCCCeeEEEEe
Q 010769 384 TAKSDPDSTSQQSSFTLH-------A---HDKAVCTISYNPLVPNLLATGS---T-----DKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~-------~---h~~~v~~l~~sp~~~~~l~t~s---~-----dg~i~vwd~~~~~~~~~~~~ 445 (502)
.... ..+..+. . +......++++|++.+++++.. . .+.+.++|+.+.+. +..+
T Consensus 240 ~~~~-------~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~v--v~~i 310 (368)
T 1mda_H 240 AAGA-------TMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQT--SGPI 310 (368)
T ss_dssp SSCC-------EEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCE--EECC
T ss_pred CCcc-------eEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeE--EEEE
Confidence 5310 1111110 0 1112223689999844444433 2 23566999999874 3333
Q ss_pred cCCCCCEEEEEEcCCCCcEEEEEe-CCCcEEEEECCCCccccccc
Q 010769 446 NPKAGAVFSVAFSEDSPFVLAIGG-SKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 446 ~~~~~~v~~~~~spd~~~llasg~-~dg~i~vwd~~~~~~~~~~~ 489 (502)
... ....+++|+|++++++++.. .++.|.++|+.+++.+.++-
T Consensus 311 ~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 311 SNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred ECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 222 25889999999987788887 69999999999999887664
No 219
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=99.11 E-value=6.6e-08 Score=89.38 Aligned_cols=207 Identities=8% Similarity=0.065 Sum_probs=138.1
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..+.+++|++.++.++++-...+.|.++++..+.....+.........+++++.+..++++-...+.|.++++.......
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~ 115 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRV 115 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEE
Confidence 35789999997566666767788999999876654433333335788999999764666666677899999987543221
Q ss_pred ceEee-cCCeEEEEeCCCCCCEEEEEeC--CCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEE
Q 010769 347 FKWAV-AADVESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 347 ~~~~~-~~~v~~v~~~p~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t 422 (502)
.... ......++++|.+..++++... .+.|..+++... ....+ ...-.....++++|++..++++
T Consensus 116 -~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~----------~~~~~~~~~~~~P~gia~d~~~~~lyv~ 184 (267)
T 1npe_A 116 -LFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT----------NRRILAQDNLGLPNGLTFDAFSSQLCWV 184 (267)
T ss_dssp -EECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC----------CCEEEECTTCSCEEEEEEETTTTEEEEE
T ss_pred -EEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC----------CcEEEEECCCCCCcEEEEcCCCCEEEEE
Confidence 2221 2457899999976644555433 478888887643 11222 1223457899999987456666
Q ss_pred EeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 423 GSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
-...+.|.++++.......+. .. ......++.. +.+++++....+.|.+++..+++.+..+.
T Consensus 185 d~~~~~I~~~~~~g~~~~~~~--~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~ 246 (267)
T 1npe_A 185 DAGTHRAECLNPAQPGRRKVL--EG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFH 246 (267)
T ss_dssp ETTTTEEEEEETTEEEEEEEE--EC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCEEEEEecCCCceEEEe--cC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEc
Confidence 667789999999765422222 22 2345667664 44567766677899999999888776654
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.08 E-value=3.5e-08 Score=94.20 Aligned_cols=197 Identities=12% Similarity=0.096 Sum_probs=130.2
Q ss_pred eeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce
Q 010769 269 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 348 (502)
..+..|+|+++.++++...++.|.+||..+++.. .+. ....+.++.|++++ +++++ +.+ .|.+||..++.... .
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg-~l~v~-~~~-gl~~~d~~~g~~~~-~ 124 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-VHA-LPFMGSALAKISDS-KQLIA-SDD-GLFLRDTATGVLTL-H 124 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETT-EEEEE-ETT-EEEEEETTTCCEEE-E
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCC-eEEEE-ECC-CEEEEECCCCcEEE-E
Confidence 4577899986677888888899999999887643 333 34679999999998 65554 444 49999987765432 1
Q ss_pred Eee-----cCCeEEEEeCCCCCCEEEEEeC------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 349 WAV-----AADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 349 ~~~-----~~~v~~v~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
... ...+..++++|++. ++++... .+.|..++ .+ .. ..+..+......++|+|++.
T Consensus 125 ~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g---------~~-~~~~~~~~~~~~i~~s~dg~ 191 (326)
T 2ghs_A 125 AELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG---------KV-TKLFADISIPNSICFSPDGT 191 (326)
T ss_dssp ECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT---------EE-EEEEEEESSEEEEEECTTSC
T ss_pred eeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC---------cE-EEeeCCCcccCCeEEcCCCC
Confidence 111 13478899999876 4444332 24566666 33 21 22222334567899999984
Q ss_pred CEEEEEeCCCcEEEEECC--CC-Ce---eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 418 NLLATGSTDKMVKLWDLS--NN-QP---SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~--~~-~~---~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
.++++.+.++.|.+|++. ++ .. ..+..+....+.+..++++++|. ++++....+.|.+|+. +++.+.
T Consensus 192 ~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~-lwva~~~~~~v~~~d~-~g~~~~ 264 (326)
T 2ghs_A 192 TGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH-IWNARWGEGAVDRYDT-DGNHIA 264 (326)
T ss_dssp EEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC-EEEEEETTTEEEEECT-TCCEEE
T ss_pred EEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC-EEEEEeCCCEEEEECC-CCCEEE
Confidence 444555667899999986 44 31 12333333445678999999998 5665556678999998 455443
No 221
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.07 E-value=2.5e-08 Score=94.21 Aligned_cols=223 Identities=15% Similarity=0.108 Sum_probs=136.8
Q ss_pred CCCCC-EEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REKGN-FMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~~~-~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++++ +++++..++.|..|+... . .. .+..+...+.++++.+++ +++++
T Consensus 53 ~~~g~~l~~~d~~~~~i~~~~~~g-~-~~---------------------------~~~~~~~~~~gl~~d~dG-~l~v~ 102 (305)
T 3dr2_A 53 WEAQRTLVWSDLVGRRVLGWREDG-T-VD---------------------------VLLDATAFTNGNAVDAQQ-RLVHC 102 (305)
T ss_dssp EGGGTEEEEEETTTTEEEEEETTS-C-EE---------------------------EEEESCSCEEEEEECTTS-CEEEE
T ss_pred eCCCCEEEEEECCCCEEEEEeCCC-C-EE---------------------------EEeCCCCccceeeECCCC-CEEEE
Confidence 57787 677777889999998732 1 10 111244568899999994 46655
Q ss_pred EecCCcEEEEECCCCeeeEEecc----CCCCeEEEEEcCCCCcEEEE----EEC-------------CCcEEEEeCCCCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEH----HTDKVQAVAWNHHSPQILLS----GSF-------------DRSVVMKDARIST 343 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~----h~~~v~~l~~~~~~~~~l~s----~~~-------------dg~i~vwd~~~~~ 343 (502)
...++.|.+|+.. ++....... ....+..+++.++| +++++ |.. .+.|..||..+++
T Consensus 103 ~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~ 180 (305)
T 3dr2_A 103 EHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP 180 (305)
T ss_dssp ETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC
T ss_pred ECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCc
Confidence 5556789999986 553322211 12346789999999 77775 332 2567778776665
Q ss_pred CccceEeecCCeEEEEeCCCCCCEEEEEeCC------CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLED------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d------g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
..... .......++|+|++. .++++... +.|.+|++..... ................+++.++|
T Consensus 181 ~~~~~--~~~~p~gl~~spdg~-~lyv~~~~~~~~~~~~i~~~~~~~~~l------~~~~~~~~~~~~~pdgi~~d~~G- 250 (305)
T 3dr2_A 181 LQRMA--DLDHPNGLAFSPDEQ-TLYVSQTPEQGHGSVEITAFAWRDGAL------HDRRHFASVPDGLPDGFCVDRGG- 250 (305)
T ss_dssp CEEEE--EESSEEEEEECTTSS-EEEEEECCC---CCCEEEEEEEETTEE------EEEEEEECCSSSCCCSEEECTTS-
T ss_pred EEEEe--cCCCCcceEEcCCCC-EEEEEecCCcCCCCCEEEEEEecCCCc------cCCeEEEECCCCCCCeEEECCCC-
Confidence 44322 445678899999876 45555443 7899999875410 00000111123456788999988
Q ss_pred CEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 418 NLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd 478 (502)
++. +++.+ .|.+|+.. ++. +..+..+. .+.+++|+|++.. |..++.++ |..++
T Consensus 251 ~lw-v~~~~-gv~~~~~~-g~~--~~~~~~~~-~~~~~~f~~d~~~-L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 251 WLW-SSSGT-GVCVFDSD-GQL--LGHIPTPG-TASNCTFDQAQQR-LFITGGPC-LWMLP 303 (305)
T ss_dssp CEE-ECCSS-EEEEECTT-SCE--EEEEECSS-CCCEEEECTTSCE-EEEEETTE-EEEEE
T ss_pred CEE-EecCC-cEEEECCC-CCE--EEEEECCC-ceeEEEEeCCCCE-EEEEcCCe-EEEEE
Confidence 544 44444 49999985 442 33333333 4888999999886 44445543 44333
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.06 E-value=3.9e-08 Score=96.47 Aligned_cols=242 Identities=10% Similarity=0.070 Sum_probs=149.8
Q ss_pred cccccCCCceEEEEEecCC-----cceeEEEEEecCCCCCCceeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010769 144 DMTINPNDAVIVCARNEDD-----VSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~~-----~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~w~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++..... ...=.|.+++.... . ....+.++ ..|..+.+ +|+|+
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~---~--vv~~I~v~g~~r~~~g~~P~~~~~-------spDGk 189 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF---L--PIADIELPDAPRFLVGTYQWMNAL-------TPDNK 189 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC---C--EEEEEEETTCCCCCBSCCGGGSEE-------CTTSS
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC---c--EEEEEECCCccccccCCCcceEEE-------cCCCC
Confidence 6899999999988864100 00116777776654 2 22223332 23444433 89999
Q ss_pred EEEEecC--CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 211 FMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 211 ~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+|.++.. ++.|.+.|+.+...+..+. . +. +....|.+...+++.+.|
T Consensus 190 ~lyV~n~~~~~~VsVID~~t~kvv~~I~-------------------------v-~g-----~~~~~p~g~~~~v~~~~d 238 (426)
T 3c75_H 190 NLLFYQFSPAPAVGVVDLEGKTFDRMLD-------------------------V-PD-----CYHIFPASPTVFYMNCRD 238 (426)
T ss_dssp EEEEEECSSSCEEEEEETTTTEEEEEEE-------------------------C-CS-----EEEEEEEETTEEEEEETT
T ss_pred EEEEEecCCCCeEEEEECCCCeEEEEEE-------------------------c-CC-----ceeeccCCCcEEEEEcCC
Confidence 9999874 5789999997643222111 0 11 123445545677778888
Q ss_pred CcEEEEECCCCeeeEE----eccCCCCe-EEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEe-----------e
Q 010769 289 KQVKIWDVAAGKCNLT----LEHHTDKV-QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA-----------V 351 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~----~~~h~~~v-~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~-----------~ 351 (502)
|++.+.++.+++.... +.....++ ..+.|.+++ ..++..+..+.|.+.|+....... ..+. .
T Consensus 239 G~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg-~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~ 317 (426)
T 3c75_H 239 GSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRS-GRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWR 317 (426)
T ss_dssp SSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTT-CEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEE
T ss_pred CCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCC-CEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccc
Confidence 9988888866665432 22112221 235678888 445555678899999986543211 0111 1
Q ss_pred cCCeEEEEeCCCCCCEEEEEe---------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEE
Q 010769 352 AADVESLAWDPHAEHSFVVSL---------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 352 ~~~v~~v~~~p~~~~~l~~~~---------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
......++++|++..++++.. ..+.|.++|+.+. +.+.++.... ...++.|+|++..++++
T Consensus 318 p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~---------kvv~~I~vg~-~P~gia~spDg~~~lyv 387 (426)
T 3c75_H 318 PGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG---------ERINKIELGH-EIDSINVSQDAEPLLYA 387 (426)
T ss_dssp ECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC---------CEEEEEEEEE-EECEEEECCSSSCEEEE
T ss_pred cCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC---------eEEEEEECCC-CcCeEEEccCCCEEEEE
Confidence 222334688998775555433 1357999999987 6666665332 47899999998427777
Q ss_pred Ee-CCCcEEEEECCCCCe
Q 010769 423 GS-TDKMVKLWDLSNNQP 439 (502)
Q Consensus 423 ~s-~dg~i~vwd~~~~~~ 439 (502)
+. .++.|.++|+.+.+.
T Consensus 388 ~n~~s~~VsVID~~t~kv 405 (426)
T 3c75_H 388 LSAGTQTLHIYDAATGEE 405 (426)
T ss_dssp EETTTTEEEEEETTTCCE
T ss_pred EcCCCCeEEEEECCCCCE
Confidence 76 599999999999984
No 223
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.03 E-value=1.9e-07 Score=90.62 Aligned_cols=232 Identities=18% Similarity=0.109 Sum_probs=138.9
Q ss_pred CCCCEEEE-ecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccc--cccccCCcccceeeEEecCCCCcEEE
Q 010769 207 EKGNFMAV-GSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSS--IKYKKGSHTDSVLGLAWNKEFRNILA 283 (502)
Q Consensus 207 ~~~~~la~-g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~h~~~V~~l~~~~~~~~~l~ 283 (502)
+++++|++ |..++.|.|+|+.+.... |... +... ....-.+ ...-..+...|++ +++
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~-p~~~----------------k~ie~~~~~~~~g-~s~Ph~~~~~pdG--i~V 152 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPRE-PKII----------------KVIEPEEVKKVSG-YSRLHTVHCGPDA--IYI 152 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTS-CEEE----------------EEECHHHHHHHHC-EEEEEEEEECSSC--EEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCC-ceee----------------eeechhhcccccC-CCcccceeECCCe--EEE
Confidence 67776655 667789999998642211 1100 0000 0000001 1134566778984 676
Q ss_pred EEecC------CcEEEEECCCCeeeEEeccCCC---CeEEEEEcCCCCcEEEEEE-------------------CCCcEE
Q 010769 284 SASAD------KQVKIWDVAAGKCNLTLEHHTD---KVQAVAWNHHSPQILLSGS-------------------FDRSVV 335 (502)
Q Consensus 284 sgs~D------g~v~vwd~~~~~~~~~~~~h~~---~v~~l~~~~~~~~~l~s~~-------------------~dg~i~ 335 (502)
++..+ |.|.++|..+.+.+.++..... .-..+.|+|++ +.+++.. ...+|.
T Consensus 153 s~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~ 231 (462)
T 2ece_A 153 SALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIH 231 (462)
T ss_dssp EEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEE
T ss_pred EcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEE
Confidence 76665 7899999999999998863222 23457889999 7777774 378999
Q ss_pred EEeCCCCCCccceEeec---CCeEEEEe--CCCCCCEEEEEe-----CCCeEEEEECCCCCCCCCCCCCCccEE--Eec-
Q 010769 336 MKDARISTHSGFKWAVA---ADVESLAW--DPHAEHSFVVSL-----EDGTIKGFDIRTAKSDPDSTSQQSSFT--LHA- 402 (502)
Q Consensus 336 vwd~~~~~~~~~~~~~~---~~v~~v~~--~p~~~~~l~~~~-----~dg~i~i~d~~~~~~~~~~~~~~~~~~--~~~- 402 (502)
+||+.+.+... ..... .....+.| +|++...++++- .+++|.+|....+. ...... +..
T Consensus 232 v~D~~~~k~~~-tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-------~~~~~vIdi~~~ 303 (462)
T 2ece_A 232 FWDLRKRKRIH-SLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-------WNAEKVIEIPAE 303 (462)
T ss_dssp EEETTTTEEEE-EEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-------EEEEEEEEECCE
T ss_pred EEECCCCcEee-EEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-------eeEEEEEeCCCc
Confidence 99999764433 23332 23445545 998875555555 67788776554321 011111 000
Q ss_pred ---------------CCCCeeEEEEcCCCCCEEEE-EeCCCcEEEEECCC-CCeeEEEEecCC--------------CCC
Q 010769 403 ---------------HDKAVCTISYNPLVPNLLAT-GSTDKMVKLWDLSN-NQPSCIASRNPK--------------AGA 451 (502)
Q Consensus 403 ---------------h~~~v~~l~~sp~~~~~l~t-~s~dg~i~vwd~~~-~~~~~~~~~~~~--------------~~~ 451 (502)
-......|.++|++ ++|++ .-..+.|.+||+.. .++..+...... .+.
T Consensus 304 ~v~~~lp~~~~~f~~~~~~pa~I~lS~DG-rfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~gg 382 (462)
T 2ece_A 304 PLEGNLPEILKPFKAVPPLVTDIDISLDD-KFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGA 382 (462)
T ss_dssp ECCSSCCGGGGGGTEECCCCCCEEECTTS-CEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSC
T ss_pred cccccccccccccccCCCceeEEEECCCC-CEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCC
Confidence 02457889999999 55554 44578999999863 333344333221 013
Q ss_pred EEEEEEcCCCCcEEEEE
Q 010769 452 VFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 452 v~~~~~spd~~~llasg 468 (502)
-..++++|||++++++.
T Consensus 383 Pr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 383 PQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCCEEECTTSSEEEEEC
T ss_pred CCEEEEcCCCCEEEEEc
Confidence 57799999999766554
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=3.8e-08 Score=93.00 Aligned_cols=225 Identities=13% Similarity=-0.000 Sum_probs=136.3
Q ss_pred ccccccccCCCce-EEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC
Q 010769 141 DLEDMTINPNDAV-IVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~-l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg 219 (502)
..+...|+|+++. ++++...+ .|+.|+.. + .+.... .....+..+.+ +++|+++++....+
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~-----~i~~~~~~-g---~~~~~~--~~~~~~~gl~~-------d~dG~l~v~~~~~~ 107 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGR-----RVLGWRED-G---TVDVLL--DATAFTNGNAV-------DAQQRLVHCEHGRR 107 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTT-----EEEEEETT-S---CEEEEE--ESCSCEEEEEE-------CTTSCEEEEETTTT
T ss_pred CccCCeEeCCCCEEEEEECCCC-----EEEEEeCC-C---CEEEEe--CCCCccceeeE-------CCCCCEEEEECCCC
Confidence 4567899999984 45544444 67777653 2 222111 12334556665 78899777766668
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCC-cccceeeEEecCCCCcEEEE----Eec-------
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNKEFRNILAS----ASA------- 287 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~~~~~~l~s----gs~------- 287 (502)
.|.+|+.+ +. .. .+.. ...+ ....+.++++.+++ .++++ |..
T Consensus 108 ~v~~~~~~-g~-~~---~~~~--------------------~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~ 161 (305)
T 3dr2_A 108 AITRSDAD-GQ-AH---LLVG--------------------RYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCP 161 (305)
T ss_dssp EEEEECTT-SC-EE---EEEC--------------------EETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCC
T ss_pred EEEEECCC-CC-EE---EEEe--------------------ccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccc
Confidence 89999875 21 11 1100 0001 12457789999995 46665 332
Q ss_pred ------CCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC------CcEEEEeCCCCCCccc-eE--eec
Q 010769 288 ------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD------RSVVMKDARISTHSGF-KW--AVA 352 (502)
Q Consensus 288 ------Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~~-~~--~~~ 352 (502)
.+.|..||..+++..... .......++|+|++ +.|+.+... +.|.+|++........ .+ ...
T Consensus 162 ~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg-~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 162 ADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDE-QTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp CCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTS-SEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred cccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCC-CEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 256778887666654433 34567889999999 656665554 7899999875431110 01 012
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
.....+++++++. +++++.+ .|.+|+... ..+..+..+. .+.+++|+|++ +.|..++.++
T Consensus 239 ~~pdgi~~d~~G~--lwv~~~~-gv~~~~~~g----------~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~ 298 (305)
T 3dr2_A 239 GLPDGFCVDRGGW--LWSSSGT-GVCVFDSDG----------QLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC 298 (305)
T ss_dssp SCCCSEEECTTSC--EEECCSS-EEEEECTTS----------CEEEEEECSS-CCCEEEECTTS-CEEEEEETTE
T ss_pred CCCCeEEECCCCC--EEEecCC-cEEEECCCC----------CEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe
Confidence 3455788898775 5555544 599998742 4555555444 58899999887 6666666554
No 225
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.00 E-value=6e-11 Score=115.61 Aligned_cols=184 Identities=16% Similarity=0.111 Sum_probs=103.6
Q ss_pred CcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee--cCCeE
Q 010769 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--AADVE 356 (502)
Q Consensus 279 ~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~ 356 (502)
+..|++++.||.|+.||..+|+.+.++.. ..+.+..+..++ .++++++.||.|+.||..+++... .+.. ...+.
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~~~ 84 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPELVQ 84 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CCSE-ECSCCHHHHHT
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCceee-eeeccCccccc
Confidence 34899999999999999999999988875 455555555666 677778899999999998776532 1111 11110
Q ss_pred -EEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECC
Q 010769 357 -SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLS 435 (502)
Q Consensus 357 -~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~ 435 (502)
+..+. .+ ..+++++.++.|+.||.+++ +.++.+..+. ...++|.+ ..+++++.++.|+.||..
T Consensus 85 ~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG---------~~~w~~~~~~----~~~~~p~~-~~v~~~~~dg~v~a~d~~ 148 (369)
T 2hz6_A 85 ASPCRS-SD-GILYMGKKQDIWYVIDLLTG---------EKQQTLSSAF----ADSLSPST-SLLYLGRTEYTITMYDTK 148 (369)
T ss_dssp TCSCC-------CCCCEEEEEEEEECCC------------------------------------EEEEEEEEEEECCCSS
T ss_pred cCceEe-cC-CEEEEEeCCCEEEEEECCCC---------cEEEEecCCC----cccccccC-CEEEEEecCCEEEEEECC
Confidence 00111 22 35778888999999999987 5556555443 23456665 788889999999999999
Q ss_pred CCCeeEEEEecCCCCCEEEEEEcCCC---CcEEEEEeCCCcEEEEECCCCccccc
Q 010769 436 NNQPSCIASRNPKAGAVFSVAFSEDS---PFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~---~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
+++..-...... .....++++. . .+++++.+|.|+.||..+++.+.+
T Consensus 149 tG~~~W~~~~~~----~~~~~~~~~~~~~~-~v~~~~~dg~v~a~d~~tG~~~W~ 198 (369)
T 2hz6_A 149 TRELRWNATYFD----YAASLPEDDVDYKM-SHFVSNGDGLVVTVDSESGDVLWI 198 (369)
T ss_dssp SSSCCCEEEEEE----ECCBCCCCCTTCCC-CEEEEETSCEEEEECTTTCCEEEE
T ss_pred CCCEEEeEeccc----ccCccccCCccccc-eEEEECCCCEEEEEECCCCcEEEE
Confidence 887432222211 1223334432 3 366688899999999999987643
No 226
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.98 E-value=1.5e-08 Score=101.87 Aligned_cols=247 Identities=10% Similarity=0.085 Sum_probs=158.7
Q ss_pred CCCCEEEEecC-CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEe-c-CCCCcEEE
Q 010769 207 EKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAW-N-KEFRNILA 283 (502)
Q Consensus 207 ~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~-~-~~~~~~l~ 283 (502)
++|++|.+... ++.|.+.|+++..+..-+. + .....+..+++ . |+++ +++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~-------------------------i-p~g~~phg~~~~~~p~~~-~v~ 151 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILE-------------------------I-PNAKGIHGLRPQKWPRSN-YVF 151 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEE-------------------------C-SSCCSEEEEEECCSSBCS-EEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEe-------------------------C-CCCCCCcceeeeecCCCc-EEE
Confidence 47888777655 4679999998754332111 0 11234667887 4 7855 555
Q ss_pred EEe------------------cCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCC-------------
Q 010769 284 SAS------------------ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR------------- 332 (502)
Q Consensus 284 sgs------------------~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg------------- 332 (502)
+++ .++.+.+.|..+.+.+.++.--. ....++++|+| .++++.+.+.
T Consensus 152 ~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~ 229 (595)
T 1fwx_A 152 CNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAE 229 (595)
T ss_dssp EEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCS
T ss_pred EecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccc
Confidence 553 35689999999999888876322 45667899998 6666666443
Q ss_pred -------------------------cEEEEeCCC--CCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCC
Q 010769 333 -------------------------SVVMKDARI--STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 385 (502)
Q Consensus 333 -------------------------~i~vwd~~~--~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~ 385 (502)
.|.+.|.++ .+.............++.++|+|..+++++..+..|.++|+.+.
T Consensus 230 ~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 230 MDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp EEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred cceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 477778776 33323345566778899999999977777888999999999854
Q ss_pred CCC--CCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC--------CeeEEEEecCCCCCE---
Q 010769 386 KSD--PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN--------QPSCIASRNPKAGAV--- 452 (502)
Q Consensus 386 ~~~--~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~--------~~~~~~~~~~~~~~v--- 452 (502)
... ........+.....-......++|+|+| ...++.-.|++|.+||+... ....+..+..|-.+-
T Consensus 310 ~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~ 388 (595)
T 1fwx_A 310 DAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLK 388 (595)
T ss_dssp HHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEE
T ss_pred ccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccce
Confidence 100 0000001122222233457889999998 77777888999999998761 112445555554322
Q ss_pred --EEEEEcCCCCcEEEEEeCC-CcE-----------EEEECCCCc
Q 010769 453 --FSVAFSEDSPFVLAIGGSK-GKL-----------EIWDTLSDA 483 (502)
Q Consensus 453 --~~~~~spd~~~llasg~~d-g~i-----------~vwd~~~~~ 483 (502)
..+.++|||+||+++.... .++ .++|+++++
T Consensus 389 ~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 389 TVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp ETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS
T ss_pred eccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc
Confidence 1234589999866655433 345 899996555
No 227
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.97 E-value=2.3e-10 Score=111.52 Aligned_cols=204 Identities=13% Similarity=0.055 Sum_probs=109.7
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
++..|++|+.+|.|+.||..+++.+... .. ..+.+..+..+ +.++++++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~---------------------------~~--~~~~s~p~~~~-g~~~v~~s~ 57 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTL---------------------------KE--DPVLQVPTHVE-EPAFLPDPN 57 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEE---------------------------EC--CCSCCCC------CCEEECTT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEe---------------------------cC--CCceecceEcC-CCEEEEeCC
Confidence 5889999999999999999765443221 11 23444444555 447777889
Q ss_pred CCcEEEEECCCCeeeEEeccCCCC-eE-EEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCC
Q 010769 288 DKQVKIWDVAAGKCNLTLEHHTDK-VQ-AVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 288 Dg~v~vwd~~~~~~~~~~~~h~~~-v~-~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~ 365 (502)
||.|+.||..+|+.+..+..+... +. +..+. .+ ..+++++.++.|+.||.++++........ . ...++|.+.
T Consensus 58 dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~~w~~~~~-~---~~~~~p~~~ 131 (369)
T 2hz6_A 58 DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEKQQTLSSA-F---ADSLSPSTS 131 (369)
T ss_dssp TCCEEEC-----CCSEECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------------------
T ss_pred CCEEEEEECCCCceeeeeeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcEEEEecCC-C---cccccccCC
Confidence 999999999999877666533211 10 00111 23 46778888999999999988764322221 1 234566544
Q ss_pred CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC--CCEEEEEeCCCcEEEEECCCCCeeEEE
Q 010769 366 HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV--PNLLATGSTDKMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 366 ~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~--~~~l~t~s~dg~i~vwd~~~~~~~~~~ 443 (502)
.+++++.++.|+.||.+++ +.++.+..+. .....+.++. ...+++++.+|.|+.||..+++. +.
T Consensus 132 -~v~~~~~dg~v~a~d~~tG---------~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~--~W 197 (369)
T 2hz6_A 132 -LLYLGRTEYTITMYDTKTR---------ELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDV--LW 197 (369)
T ss_dssp --EEEEEEEEEEECCCSSSS---------SCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCE--EE
T ss_pred -EEEEEecCCEEEEEECCCC---------CEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcE--EE
Confidence 7888888999999999987 4455543221 1222333321 14567788999999999999883 44
Q ss_pred EecCCCCCEE-EEEEcCCCC
Q 010769 444 SRNPKAGAVF-SVAFSEDSP 462 (502)
Q Consensus 444 ~~~~~~~~v~-~~~~spd~~ 462 (502)
.... .+++. ...+++++.
T Consensus 198 ~~~~-~~pv~~~~~~~~dg~ 216 (369)
T 2hz6_A 198 IQNY-ASPVVAFYVWQREGL 216 (369)
T ss_dssp EEEC-SSCEEEEEECTTSSC
T ss_pred EecC-CCceEEEEEecCCce
Confidence 4432 23443 344556653
No 228
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.95 E-value=8.4e-08 Score=100.84 Aligned_cols=242 Identities=11% Similarity=0.078 Sum_probs=148.1
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee-EEecCCCCcEEEEEe
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG-LAWNKEFRNILASAS 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~-l~~~~~~~~~l~sgs 286 (502)
.+..|++++.++.|..+|..+++.+...... ... .....+.+ .... + + .++.++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~---------------~~~-------~~~~~~~~~p~v~-~-~-~v~v~~ 181 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTF---------------EGQ-------KGSLTITGAPRVF-K-G-KVIIGN 181 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETT---------------TTC-------CSSCBCCSCCEEE-T-T-EEEECC
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCC---------------cCc-------CcCcccccCcEEE-C-C-EEEEEe
Confidence 4678888899999999999876544322110 000 00001111 1111 2 3 455554
Q ss_pred c------CCcEEEEECCCCeeeEEeccCCCC--------------------------------eEEEEEcCCCCcEEEEE
Q 010769 287 A------DKQVKIWDVAAGKCNLTLEHHTDK--------------------------------VQAVAWNHHSPQILLSG 328 (502)
Q Consensus 287 ~------Dg~v~vwd~~~~~~~~~~~~h~~~--------------------------------v~~l~~~~~~~~~l~s~ 328 (502)
. ++.|+.||..+|+.+.++...... ...++++|.+ .+++.+
T Consensus 182 ~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~ 260 (677)
T 1kb0_A 182 GGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVG 260 (677)
T ss_dssp BCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEE
T ss_pred cccccCCCCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEE
Confidence 3 799999999999988777532211 1356788887 677777
Q ss_pred ECCC-------------------cEEEEeCCCCCCccceEee---------cCCeEEEEeCCCCC--CEEEEEeCCCeEE
Q 010769 329 SFDR-------------------SVVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIK 378 (502)
Q Consensus 329 ~~dg-------------------~i~vwd~~~~~~~~~~~~~---------~~~v~~v~~~p~~~--~~l~~~~~dg~i~ 378 (502)
+.++ .|..+|.++++..-..... ......+....++. ..+++++.+|.|+
T Consensus 261 ~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~ 340 (677)
T 1kb0_A 261 TGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFF 340 (677)
T ss_dssp CCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEE
T ss_pred CCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEE
Confidence 6654 4999999887754322111 11122222222342 4788899999999
Q ss_pred EEECCCCCCCCCCCCCCccEEEecCC-----------CCe------------------------eEEEEcCCCCCEEEEE
Q 010769 379 GFDIRTAKSDPDSTSQQSSFTLHAHD-----------KAV------------------------CTISYNPLVPNLLATG 423 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~h~-----------~~v------------------------~~l~~sp~~~~~l~t~ 423 (502)
++|..++ +.++...... .++ ..++|+|+. .++++.
T Consensus 341 ~lD~~tG---------~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~-~~~yv~ 410 (677)
T 1kb0_A 341 VLDRTNG---------KFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQT-GLVYLP 410 (677)
T ss_dssp EEETTTC---------CEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTT-TEEEEE
T ss_pred EEECCCC---------CEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCC-CEEEEe
Confidence 9999987 3443332111 000 257888887 666664
Q ss_pred eC-------------------------------------------CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCC
Q 010769 424 ST-------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 424 s~-------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
.. .|.|..||+.+++. +.... +..++....+...
T Consensus 411 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~-~~~~~~~g~~~~~ 487 (677)
T 1kb0_A 411 AQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKA--AWSVE-HVSPWNGGTLTTA 487 (677)
T ss_dssp EEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEE--EEEEE-ESSSCCCCEEEET
T ss_pred ChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcE--EeecC-CCCCCcCcceEeC
Confidence 32 27799999999884 33332 2233444456666
Q ss_pred CCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 461 SPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 461 ~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+. ++++++.+|.+++||+.+++.+.+..
T Consensus 488 g~-~v~~g~~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 488 GN-VVFQGTADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CC-EEEEECCCCcEEEEECCCCceeeeee
Confidence 66 57778999999999999999987654
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.94 E-value=6e-08 Score=102.17 Aligned_cols=243 Identities=12% Similarity=0.048 Sum_probs=144.4
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe-
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS- 286 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs- 286 (502)
.+..|++++.++.|..+|..+++.+....... ... ........++ +. + + .++.++
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~---------------~~~--~~~~~~~sP~----v~-~-g-~v~vg~~ 175 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVDTRA---------------DHK--RSYTITGAPR----VV-N-G-KVVIGNG 175 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCS---------------CTT--SCCBCCSCCE----EE-T-T-EEEECCB
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeecCcC---------------CCC--CCccccCCcE----EE-C-C-EEEEEeC
Confidence 46788889999999999998766543221100 000 0000011111 11 2 3 444443
Q ss_pred -----cCCcEEEEECCCCeeeEEeccCC-------------------------------CCeEEEEEcCCCCcEEEEEEC
Q 010769 287 -----ADKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLSGSF 330 (502)
Q Consensus 287 -----~Dg~v~vwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~~l~s~~~ 330 (502)
.+|.|..||..+|+.+..+.... .....+++.|.. .+++.++.
T Consensus 176 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~ 254 (689)
T 1yiq_A 176 GAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVG 254 (689)
T ss_dssp CTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECC
T ss_pred CCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCC
Confidence 37899999999999887764210 011256788877 67888877
Q ss_pred CCc-------------------EEEEeCCCCCCccceEee---------cCCeEEEEeCCCCC--CEEEEEeCCCeEEEE
Q 010769 331 DRS-------------------VVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIKGF 380 (502)
Q Consensus 331 dg~-------------------i~vwd~~~~~~~~~~~~~---------~~~v~~v~~~p~~~--~~l~~~~~dg~i~i~ 380 (502)
++. |..+|.++++..-..... ...+.......++. ..++.++.+|.++++
T Consensus 255 ~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~l 334 (689)
T 1yiq_A 255 NGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVI 334 (689)
T ss_dssp CEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEE
Confidence 763 999999988754322211 11111111111221 268888999999999
Q ss_pred ECCCCCCCCCCCCCCccEEEecC----------------------------C-----------CCeeEEEEcCCCCCEEE
Q 010769 381 DIRTAKSDPDSTSQQSSFTLHAH----------------------------D-----------KAVCTISYNPLVPNLLA 421 (502)
Q Consensus 381 d~~~~~~~~~~~~~~~~~~~~~h----------------------------~-----------~~v~~l~~sp~~~~~l~ 421 (502)
|.++++. ++..... . ..-..++|+|.. .+++
T Consensus 335 D~~tG~~---------l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~-~~~y 404 (689)
T 1yiq_A 335 DRATGEL---------LSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDT-GLVY 404 (689)
T ss_dssp ETTTCCE---------EEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTT-TEEE
T ss_pred ECCCCCE---------eccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCC-CEEE
Confidence 9998732 2111100 0 011237888876 5666
Q ss_pred EEeC---------------------------------------------CCcEEEEECCCCCeeEEEEecCCCCCEEEEE
Q 010769 422 TGST---------------------------------------------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVA 456 (502)
Q Consensus 422 t~s~---------------------------------------------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~ 456 (502)
+.+. +|.|+.||+.+++. +.....+ .++....
T Consensus 405 v~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~--~W~~~~~-~~~~~g~ 481 (689)
T 1yiq_A 405 IPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQA--AWEVPYV-TIFNGGT 481 (689)
T ss_dssp EEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEE--EEEEEES-SSCCCCE
T ss_pred EeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCe--EeEccCC-CCccCcc
Confidence 5422 37799999999984 3333322 2233334
Q ss_pred EcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 457 FSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 457 ~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+...+. ++++|+.||.|+.||..+++.+.+.-
T Consensus 482 ~~tagg-lvf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 482 LSTAGN-LVFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred ceECCC-EEEEECCCCcEEEEECCCCccceeee
Confidence 555566 68889999999999999999886543
No 230
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.93 E-value=1.5e-06 Score=80.08 Aligned_cols=216 Identities=10% Similarity=0.023 Sum_probs=131.4
Q ss_pred CCC-CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEE
Q 010769 206 REK-GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILAS 284 (502)
Q Consensus 206 s~~-~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~s 284 (502)
+++ +.++++-...+.|.+++++.... .. ..........+|++.+.++.++++
T Consensus 44 d~~~~~ly~~d~~~~~I~~~~~~g~~~---~~------------------------~~~~~~~~p~~ia~d~~~~~lyv~ 96 (267)
T 1npe_A 44 DCVDKVVYWTDISEPSIGRASLHGGEP---TT------------------------IIRQDLGSPEGIALDHLGRTIFWT 96 (267)
T ss_dssp ETTTTEEEEEETTTTEEEEEESSSCCC---EE------------------------EECTTCCCEEEEEEETTTTEEEEE
T ss_pred ecCCCEEEEEECCCCEEEEEecCCCCc---EE------------------------EEECCCCCccEEEEEecCCeEEEE
Confidence 554 45555656678999999864211 00 001112457899999875666666
Q ss_pred EecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEEC--CCcEEEEeCCCCCCccceEeecCCeEEEEeCC
Q 010769 285 ASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSF--DRSVVMKDARISTHSGFKWAVAADVESLAWDP 362 (502)
Q Consensus 285 gs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p 362 (502)
-...+.|.++++........+.........++++|++..++++... .+.|..+++..................++++|
T Consensus 97 d~~~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~~~~~~~~~~~P~gia~d~ 176 (267)
T 1npe_A 97 DSQLDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNRRILAQDNLGLPNGLTFDA 176 (267)
T ss_dssp ETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCCEEEECTTCSCEEEEEEET
T ss_pred ECCCCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCcEEEEECCCCCCcEEEEcC
Confidence 6777899999987543222222222567899999976355555443 46888888764332211111124578899999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEE
Q 010769 363 HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCI 442 (502)
Q Consensus 363 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~ 442 (502)
++..++++-...+.|..++.... ....... .......+++. +..++++....+.|.++|..+++. +
T Consensus 177 ~~~~lyv~d~~~~~I~~~~~~g~---------~~~~~~~-~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~--~ 242 (267)
T 1npe_A 177 FSSQLCWVDAGTHRAECLNPAQP---------GRRKVLE-GLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKE--M 242 (267)
T ss_dssp TTTEEEEEETTTTEEEEEETTEE---------EEEEEEE-CCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEE--E
T ss_pred CCCEEEEEECCCCEEEEEecCCC---------ceEEEec-CCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCc--e
Confidence 87766677777889999998753 2112222 22334566654 335666665678999999988873 3
Q ss_pred EEecCCC-CCEEEEEEcCCCC
Q 010769 443 ASRNPKA-GAVFSVAFSEDSP 462 (502)
Q Consensus 443 ~~~~~~~-~~v~~~~~spd~~ 462 (502)
..+.... .....+++.|++.
T Consensus 243 ~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 243 DTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp EEECCSSCCCCCCEEEECSCC
T ss_pred EEEccccccccceeeecCccC
Confidence 3333222 2356777877764
No 231
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.90 E-value=7.3e-08 Score=92.91 Aligned_cols=251 Identities=10% Similarity=-0.020 Sum_probs=150.0
Q ss_pred cccccCCCceEEEEEecC-----CcceeEEEEEecCCCCCCceeeeeccccC--------CCcceeeeecCCCCCCCCCC
Q 010769 144 DMTINPNDAVIVCARNED-----DVSHLEVYILEESDGGDPNLYVHHHIIIP--------AFPLCMAWLDCPLKDREKGN 210 (502)
Q Consensus 144 ~~~~~p~~~~l~~~~~~~-----~~~~l~v~~~~~~~~~~~~l~~~~~~~~~--------~~~~~~~w~~~~~~~s~~~~ 210 (502)
.+.++|+++.|.++.... ....=.|.+++.... . ....+.++ ..|..+.. +|+|+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~---~--vv~~I~v~~~~~~~~g~~P~~ia~-------SpDGk 136 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF---L--PIADIELPDAPRFSVGPRVHIIGN-------CASSA 136 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC---C--EEEEEEETTSCSCCBSCCTTSEEE-------CTTSS
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC---C--EEEEEECCCccccccCCCcceEEE-------cCCCC
Confidence 689999999998886310 000116777776654 2 22333333 23555544 89999
Q ss_pred EEEEecC--CCcEEE--eeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 211 FMAVGSM--EPAIEI--WDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 211 ~la~g~~--dg~I~i--wdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
+|+++.. ...|.+ +|+.+ +..+ .. +. |+.+.|++...+++.+
T Consensus 137 ~lyVan~~~~~~v~V~~iD~~t---v~~i-------------------------~v-~~-----~~~~~p~g~~~~~~~~ 182 (368)
T 1mda_H 137 CLLFFLFGSSAAAGLSVPGASD---DQLT-------------------------KS-AS-----CFHIHPGAAATHYLGS 182 (368)
T ss_dssp CEEEEECSSSCEEEEEETTTEE---EEEE-------------------------EC-SS-----CCCCEEEETTEEECCC
T ss_pred EEEEEccCCCCeEEEEEEchhh---ceEE-------------------------EC-CC-----ceEEccCCCeEEEEEc
Confidence 9999875 357888 88853 1100 00 11 1223456566777778
Q ss_pred cCCcEEEEECCC-----CeeeEE----eccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-ceEe------
Q 010769 287 ADKQVKIWDVAA-----GKCNLT----LEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-FKWA------ 350 (502)
Q Consensus 287 ~Dg~v~vwd~~~-----~~~~~~----~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-~~~~------ 350 (502)
.||.+.+.++.+ ++.+.. +.....+. . .+++ ..++..+. +.|.+.|+....... ..+.
T Consensus 183 ~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~---~-~~~~-~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~ 256 (368)
T 1mda_H 183 CPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA---Q-ANYP-GMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGR 256 (368)
T ss_dssp CTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE---E-ETTT-TEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHH
T ss_pred CCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc---c-cccC-CEEEEEcC-CEEEEEECCCCcceEEEEEEeccccc
Confidence 899998899886 443321 11122333 3 5555 34444455 999999986532110 0110
Q ss_pred -----ecCCeEEEEeCCCCCCEEEEEe---C-----CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 351 -----VAADVESLAWDPHAEHSFVVSL---E-----DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 351 -----~~~~v~~v~~~p~~~~~l~~~~---~-----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
.......++++|++..++++.. . .+.+.++|+.+. +.+..+.... ...+++|+|++.
T Consensus 257 ~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~---------~vv~~i~vg~-~p~gi~~s~Dg~ 326 (368)
T 1mda_H 257 KADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG---------QTSGPISNGH-DSDAIIAAQDGA 326 (368)
T ss_dssp HHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC---------CEEECCEEEE-EECEEEECCSSS
T ss_pred cccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC---------eEEEEEECCC-CcceEEECCCCC
Confidence 1122233689998875554443 2 235669999987 4555554333 588999999986
Q ss_pred CEEEEEe-CCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcC
Q 010769 418 NLLATGS-TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSE 459 (502)
Q Consensus 418 ~~l~t~s-~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~sp 459 (502)
.++++.. .++.|.++|+.+.+ .+..+... .....+++.+
T Consensus 327 ~l~va~~~~~~~VsVID~~t~k--vv~~I~vg-~~P~~i~~~~ 366 (368)
T 1mda_H 327 SDNYANSAGTEVLDIYDAASDQ--DQSSVELD-KGPESLSVQN 366 (368)
T ss_dssp CEEEEEETTTTEEEEEESSSCE--EEEECCCC-SCCCEEECCC
T ss_pred EEEEEccCCCCeEEEEECCCCc--EEEEEECC-CCCCEEEeec
Confidence 6788888 69999999999987 44455433 3344555544
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.90 E-value=1.1e-07 Score=95.47 Aligned_cols=255 Identities=12% Similarity=0.132 Sum_probs=160.8
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchh------hhhhccccC----------Cccc-cccccCCcccceeeEEe
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE------KKKKKSKKG----------KKSS-IKYKKGSHTDSVLGLAW 274 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~------~~~~~~~~~----------~~~~-~~~~~~~h~~~V~~l~~ 274 (502)
|.+|+..|.++|+-+.++..+..+.++...... ..++..... .... ....-..|- ..+++
T Consensus 18 f~s~g~~g~~~v~g~ps~r~~~~i~vf~~~~~~g~g~~~es~~~l~~~~~~~~~~~~~~~g~~~~~~gd~hh---~~~s~ 94 (595)
T 1fwx_A 18 FWSSGQSGEMRILGIPSMRELMRVPVFNRCSATGWGQTNESVRIHERTMSERTKKFLAANGKRIHDNGDLHH---VHMSF 94 (595)
T ss_dssp EECCBTTCEEEEEEETTCCEEEEEESSSCCTTTCTTTBHHHHHHHHTTCCHHHHHHHHHTTCSSCCCCCBCC---EEEEE
T ss_pred EeeCCcCceEEEEecCCcceEEEeeeecCCCCcccCCchhHHHHHhccCCccchhhhhccCceecccCCCCc---cccCC
Confidence 678899999999999998887776666543322 111111100 0000 000111121 33344
Q ss_pred ---cCCCCcEEEEEecCCcEEEEECCCCeeeEEecc-CCCCeEEEEE-c-CCCCcEEEEEE------------------C
Q 010769 275 ---NKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAW-N-HHSPQILLSGS------------------F 330 (502)
Q Consensus 275 ---~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~l~~-~-~~~~~~l~s~~------------------~ 330 (502)
.++|+.++++...++.|.+.|+.+.++...+.- ....+..+++ + |++ .++++++ .
T Consensus 95 t~g~~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~-~~v~~~~~~~~p~~~dg~~l~~~~~~ 173 (595)
T 1fwx_A 95 TEGKYDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRS-NYVFCNGEDETPLVNDGTNMEDVANY 173 (595)
T ss_dssp ETTEEEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBC-SEEEEEECSCEESSCSSSSTTCGGGE
T ss_pred CCCCcCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCC-cEEEEecccccccCCCCccccccccc
Confidence 236565666666677899999999998885532 2345788887 4 888 5666663 3
Q ss_pred CCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCC------------------------------------
Q 010769 331 DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED------------------------------------ 374 (502)
Q Consensus 331 dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d------------------------------------ 374 (502)
++.+.+.|..+.+... .....+....++++|++...++++...
T Consensus 174 ~~~vtvID~~t~~v~~-qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~ 252 (595)
T 1fwx_A 174 VNVFTAVDADKWEVAW-QVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQE 252 (595)
T ss_dssp EEEEEEEETTTTEEEE-EEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEE
T ss_pred CceEEEEECCCCeEEE-EEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeE
Confidence 4578999998755433 334444667788999887544444332
Q ss_pred -CeEEEEECCCCCCCCCCCCCCc-cEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe----------eEE
Q 010769 375 -GTIKGFDIRTAKSDPDSTSQQS-SFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP----------SCI 442 (502)
Q Consensus 375 -g~i~i~d~~~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~----------~~~ 442 (502)
+.|.+.|.++.. ... +..+.. .....++.++|+|..+++++..+.+|.++|+.+.+. ..+
T Consensus 253 i~~V~VID~~~~~-------~~~~~~~Ipv-g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~ 324 (595)
T 1fwx_A 253 LNGVKVVDGRKEA-------SSLFTRYIPI-ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVV 324 (595)
T ss_dssp ETTEEEEECSGGG-------CCSSEEEEEE-ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEE
T ss_pred ECcEEEEeCcccC-------CceeEEEEec-CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceE
Confidence 136666666520 022 334433 245688999999955666667789999999986421 123
Q ss_pred EEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 443 ASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 443 ~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
..... ......++|+|+| +++++...++.|.+||+.+
T Consensus 325 ~~v~v-G~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 325 AEPEL-GLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ECCBC-CSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred EEcCC-CCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 33332 3457889999999 6888888999999999977
No 233
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.89 E-value=4.1e-06 Score=79.31 Aligned_cols=211 Identities=12% Similarity=0.078 Sum_probs=136.3
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCC----CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
..+.+++|.+.++.++++-...+.|..+++.. ......+...-.....+++.+.+.+++++-...+.|.++++...
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45789999987565666667778999999876 22222233223456788888765466677677889999998754
Q ss_pred CCccceEeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEE
Q 010769 343 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 343 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l 420 (502)
...............++++|.+..++++.... +.|..+++... ....+ ...-.....++++|.+..++
T Consensus 110 ~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~----------~~~~~~~~~~~~P~gla~d~~~~~lY 179 (316)
T 1ijq_A 110 KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV----------DIYSLVTENIQWPNGITLDLLSGRLY 179 (316)
T ss_dssp SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC----------CeEEEEECCCCCceEEEEeccCCEEE
Confidence 33221222235678999998766555555443 78888887532 22222 22335678999998774666
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
++-+..+.|..+++.......+............+++.. + +++.+-...+.|..++..+++.+..+.
T Consensus 180 ~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~~-~-~ly~~d~~~~~V~~~~~~~g~~~~~i~ 246 (316)
T 1ijq_A 180 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGSDVNLLA 246 (316)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred EEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEEC-C-EEEEEECCCCeEEEEeCCCCcceEEEe
Confidence 666677899999998654333333322334567888853 3 467777778899999987777655443
No 234
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.87 E-value=1.2e-06 Score=85.22 Aligned_cols=223 Identities=8% Similarity=0.056 Sum_probs=132.2
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+..+++++.++.|..+|..++..+..... ............+ ... + ..++.++.+
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~------------------~~~~~~~~~~~~~----~~~-~--~~v~~g~~~ 197 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNL------------------DMPSLSLRGESAP----TTA-F--GAAVVGGDN 197 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEEC------------------CC-----CCCCCC----EEE-T--TEEEECCTT
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeC------------------CCCceeecCCCCc----EEE-C--CEEEEEcCC
Confidence 55788888899999999876544322110 0000000111111 122 2 367788889
Q ss_pred CcEEEEECCCCeeeEEeccCCCC----eEE---EEEcC--CCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEE
Q 010769 289 KQVKIWDVAAGKCNLTLEHHTDK----VQA---VAWNH--HSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLA 359 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~----v~~---l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~ 359 (502)
+.|..+|..+++.+..+...... +.. +...| .+ ..++.++.++.+..+|.++++..- ... ......+.
T Consensus 198 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~-~~v~~~~~~g~l~~~d~~tG~~~w-~~~-~~~~~~~~ 274 (376)
T 3q7m_A 198 GRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVN-GVVFALAYNGNLTALDLRSGQIMW-KRE-LGSVNDFI 274 (376)
T ss_dssp TEEEEEETTTCCEEEEEECCC-----------CCCCCCEEET-TEEEEECTTSCEEEEETTTCCEEE-EEC-CCCEEEEE
T ss_pred CEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEEC-CEEEEEecCcEEEEEECCCCcEEe-ecc-CCCCCCce
Confidence 99999999999887766432110 000 00111 12 467778889999999998876432 111 12233444
Q ss_pred eCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 360 WDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 360 ~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
.. +. .+++++.+|.|..+|..++ +.++.... ....+...... + ..|+.++.+|.|.++|..+++
T Consensus 275 ~~--~~-~l~~~~~~g~l~~~d~~tG---------~~~w~~~~~~~~~~~~~~~~--~-~~l~v~~~~g~l~~~d~~tG~ 339 (376)
T 3q7m_A 275 VD--GN-RIYLVDQNDRVMALTIDGG---------VTLWTQSDLLHRLLTSPVLY--N-GNLVVGDSEGYLHWINVEDGR 339 (376)
T ss_dssp EE--TT-EEEEEETTCCEEEEETTTC---------CEEEEECTTTTSCCCCCEEE--T-TEEEEECTTSEEEEEETTTCC
T ss_pred EE--CC-EEEEEcCCCeEEEEECCCC---------cEEEeecccCCCcccCCEEE--C-CEEEEEeCCCeEEEEECCCCc
Confidence 43 23 6888888999999999987 55665552 22233333333 2 678888999999999999998
Q ss_pred eeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 439 PSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 439 ~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd 478 (502)
.. .........+.+.....++ .|..++.+|.|+.|+
T Consensus 340 ~~--~~~~~~~~~~~~~~~~~~~--~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 340 FV--AQQKVDSSGFQTEPVAADG--KLLIQAKDGTVYSIT 375 (376)
T ss_dssp EE--EEEECCTTCBCSCCEEETT--EEEEEBTTSCEEEEE
T ss_pred EE--EEEecCCCcceeCCEEECC--EEEEEeCCCEEEEEe
Confidence 43 3333222222221111244 366788999999987
No 235
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.86 E-value=6.5e-07 Score=94.24 Aligned_cols=184 Identities=13% Similarity=0.188 Sum_probs=118.2
Q ss_pred eeEEecCCCCcEEEEEecCCc-------------------EEEEECCCCeeeEEecc--CC-------CCeEEEEEcCCC
Q 010769 270 LGLAWNKEFRNILASASADKQ-------------------VKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNHHS 321 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~Dg~-------------------v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~~~~ 321 (502)
..+++.|. ..+|+.++.++. |..||..+|+.+..++. |. ..+.......++
T Consensus 238 ~~~~~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G 316 (689)
T 1yiq_A 238 DSFAYDPE-LNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDG 316 (689)
T ss_dssp SCEEEETT-TTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETT
T ss_pred cceeEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCC
Confidence 46788887 458888887764 99999999999887753 21 122222222234
Q ss_pred C--cEEEEEECCCcEEEEeCCCCCCccce------Eeec---------------------------------CCeEEEEe
Q 010769 322 P--QILLSGSFDRSVVMKDARISTHSGFK------WAVA---------------------------------ADVESLAW 360 (502)
Q Consensus 322 ~--~~l~s~~~dg~i~vwd~~~~~~~~~~------~~~~---------------------------------~~v~~v~~ 360 (502)
. ..++.++.+|.++++|.++++.+... +... ..-..+++
T Consensus 317 ~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~ 396 (689)
T 1yiq_A 317 KPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSY 396 (689)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEE
T ss_pred cEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceE
Confidence 1 37888999999999999988764211 0000 00112677
Q ss_pred CCCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCCCCCCCCCCC
Q 010769 361 DPHAEHSFVVSLE---------------------------------------------DGTIKGFDIRTAKSDPDSTSQQ 395 (502)
Q Consensus 361 ~p~~~~~l~~~~~---------------------------------------------dg~i~i~d~~~~~~~~~~~~~~ 395 (502)
+|... ++++... +|.|+.||+.++ +
T Consensus 397 dp~~~-~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG---------~ 466 (689)
T 1yiq_A 397 NPDTG-LVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQ---------Q 466 (689)
T ss_dssp ETTTT-EEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTT---------E
T ss_pred CCCCC-EEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCC---------C
Confidence 77655 5555421 377999999987 6
Q ss_pred ccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCC-CEEEEEEcCCCCcEEEEE
Q 010769 396 SSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAG-AVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 396 ~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~-~v~~~~~spd~~~llasg 468 (502)
.+++...+.. +..-.+...+ .++++++.||.|+.||.++++. +..+....+ ...-+.|..+|+..+++.
T Consensus 467 ~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~ty~~~G~qyv~~~ 536 (689)
T 1yiq_A 467 AAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIAYAADTGEK--LWEQPAASGVMAAPVTYSVDGEQYVTFM 536 (689)
T ss_dssp EEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred eEeEccCCCC-ccCccceECC-CEEEEECCCCcEEEEECCCCcc--ceeeeCCCCcccCceEEEECCEEEEEEE
Confidence 7777765543 3333455555 7899999999999999999984 444432222 223466778887445444
No 236
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.84 E-value=4.8e-07 Score=82.51 Aligned_cols=198 Identities=10% Similarity=0.001 Sum_probs=134.8
Q ss_pred ceeeEEecCCCCcEEEEEec--CCcEEEEECCCCeeeEEeccCC-CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC
Q 010769 268 SVLGLAWNKEFRNILASASA--DKQVKIWDVAAGKCNLTLEHHT-DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~--Dg~v~vwd~~~~~~~~~~~~h~-~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 344 (502)
....|.|+++ +.++++.+. ++.|.++|+.+++.+.++.... .....+++. +..+.++.-.++.+.++|..+.+.
T Consensus 22 f~~Gl~~~~d-g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v 98 (266)
T 2iwa_A 22 FTQGLVYAEN-DTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSN 98 (266)
T ss_dssp CEEEEEECST-TEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEE
T ss_pred CcccEEEeCC-CeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCcE
Confidence 3579999998 444544443 5799999999999988875322 233455665 335666666789999999988766
Q ss_pred ccceEeec-CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC--C---CCeeEEEEcCCCCC
Q 010769 345 SGFKWAVA-ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPN 418 (502)
Q Consensus 345 ~~~~~~~~-~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h--~---~~v~~l~~sp~~~~ 418 (502)
... .... ..-..+ ++++..++ ++..++.|.++|..+. +.+..+... . ..++.+.|. ++ .
T Consensus 99 ~~~-i~~g~~~g~gl--t~Dg~~l~-vs~gs~~l~viD~~t~---------~v~~~I~Vg~~~~p~~~~nele~~-dg-~ 163 (266)
T 2iwa_A 99 IKN-FTHQMKDGWGL--ATDGKILY-GSDGTSILYEIDPHTF---------KLIKKHNVKYNGHRVIRLNELEYI-NG-E 163 (266)
T ss_dssp EEE-EECCSSSCCEE--EECSSSEE-EECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEE-EECCCCCeEEE--EECCCEEE-EECCCCeEEEEECCCC---------cEEEEEEECCCCcccccceeEEEE-CC-E
Confidence 543 3322 222334 44566544 5557889999999886 444444422 1 236678888 45 5
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 419 LLATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
+.+....++.|.+.|..+++........+ .......++|+|++..+++++...+.|.+.++....
T Consensus 164 lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEECC
T ss_pred EEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEeccc
Confidence 66666568899999999998544444321 113568999999998888988888999999987643
No 237
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.84 E-value=2.6e-06 Score=82.79 Aligned_cols=228 Identities=11% Similarity=0.087 Sum_probs=138.6
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|.+++.++.|..+|..++........ ........... + ..++.++.
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~---------------------------~~~~~~~p~~~-~--~~v~v~~~ 151 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKV---------------------------AGEALSRPVVS-D--GLVLIHTS 151 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEEC---------------------------SSCCCSCCEEE-T--TEEEEECT
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeC---------------------------CCceEcCCEEE-C--CEEEEEcC
Confidence 366788888899999999876543321110 00001111122 2 37888889
Q ss_pred CCcEEEEECCCCeeeEEeccCCCCe-----EEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCC-----eEE
Q 010769 288 DKQVKIWDVAAGKCNLTLEHHTDKV-----QAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAAD-----VES 357 (502)
Q Consensus 288 Dg~v~vwd~~~~~~~~~~~~h~~~v-----~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~-----v~~ 357 (502)
++.|..+|..+++.+..+....... ...... + ..++.++.++.|..+|..+++..-. ...... +..
T Consensus 152 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~l~~~d~~tG~~~w~-~~~~~~~~~~~~~~ 227 (376)
T 3q7m_A 152 NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGRVSAVLMEQGQMIWQ-QRISQATGSTEIDR 227 (376)
T ss_dssp TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTEEEEEETTTCCEEEE-EECCC---------
T ss_pred CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCEEEEEECCCCcEEEE-EecccCCCCccccc
Confidence 9999999999999887775422111 111222 2 4677788899999999987765321 111110 000
Q ss_pred ---EEeCCC-CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEE
Q 010769 358 ---LAWDPH-AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWD 433 (502)
Q Consensus 358 ---v~~~p~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd 433 (502)
+.-.|- ....+++++.+|.|..+|.+++ +.++.... .....+... + ..|+.++.++.|..+|
T Consensus 228 ~~~~~~~p~~~~~~v~~~~~~g~l~~~d~~tG---------~~~w~~~~--~~~~~~~~~--~-~~l~~~~~~g~l~~~d 293 (376)
T 3q7m_A 228 LSDVDTTPVVVNGVVFALAYNGNLTALDLRSG---------QIMWKREL--GSVNDFIVD--G-NRIYLVDQNDRVMALT 293 (376)
T ss_dssp --CCCCCCEEETTEEEEECTTSCEEEEETTTC---------CEEEEECC--CCEEEEEEE--T-TEEEEEETTCCEEEEE
T ss_pred ccccCCCcEEECCEEEEEecCcEEEEEECCCC---------cEEeeccC--CCCCCceEE--C-CEEEEEcCCCeEEEEE
Confidence 101110 1236888888999999999887 55555442 234445444 3 6788888899999999
Q ss_pred CCCCCeeEEEEec-CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 434 LSNNQPSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 434 ~~~~~~~~~~~~~-~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..+++. +.... .....+...... +. .|.+++.+|.|.++|..+++.+.+.
T Consensus 294 ~~tG~~--~w~~~~~~~~~~~~~~~~--~~-~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 294 IDGGVT--LWTQSDLLHRLLTSPVLY--NG-NLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TTTCCE--EEEECTTTTSCCCCCEEE--TT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCCCcE--EEeecccCCCcccCCEEE--CC-EEEEEeCCCeEEEEECCCCcEEEEE
Confidence 999884 33333 111222222232 23 3777888999999999999877543
No 238
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.83 E-value=9.5e-07 Score=92.81 Aligned_cols=201 Identities=9% Similarity=0.121 Sum_probs=128.4
Q ss_pred ceeeEEecCCCCcEEEEEecCC-------------------cEEEEECCCCeeeEEecc--CC-------CCeEEEEEcC
Q 010769 268 SVLGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWNH 319 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg-------------------~v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~~ 319 (502)
....+++.|. ..+|+.++.++ +|..+|..+|+.+..++. |. .....+....
T Consensus 244 ~w~~~~~d~~-~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~ 322 (677)
T 1kb0_A 244 MWDSMTFDAE-LNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKI 322 (677)
T ss_dssp CCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEE
T ss_pred cccceeEcCC-CCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEeccc
Confidence 3456788888 45777776654 599999999999887753 21 1122223333
Q ss_pred CCC--cEEEEEECCCcEEEEeCCCCCCccceEeec----------CC-e------------------------EEEEeCC
Q 010769 320 HSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA----------AD-V------------------------ESLAWDP 362 (502)
Q Consensus 320 ~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~----------~~-v------------------------~~v~~~p 362 (502)
+|. ..++.++.+|.|+++|.++++.+....... +. + ..++++|
T Consensus 323 dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp 402 (677)
T 1kb0_A 323 AGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNP 402 (677)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEET
T ss_pred CCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcC
Confidence 442 578889999999999999887643211000 00 0 1467788
Q ss_pred CCCCEEEEEeC-------------------------------------------CCeEEEEECCCCCCCCCCCCCCccEE
Q 010769 363 HAEHSFVVSLE-------------------------------------------DGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 363 ~~~~~l~~~~~-------------------------------------------dg~i~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
+.. ++++... .|.|..||+.++ +.++.
T Consensus 403 ~~~-~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG---------~~~W~ 472 (677)
T 1kb0_A 403 QTG-LVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ---------KAAWS 472 (677)
T ss_dssp TTT-EEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---------EEEEE
T ss_pred CCC-EEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---------cEEee
Confidence 765 5655432 278999999887 66777
Q ss_pred EecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC-CCCCEEEEEEcCCCCcEEEEEeC--------
Q 010769 400 LHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP-KAGAVFSVAFSEDSPFVLAIGGS-------- 470 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~v~~~~~spd~~~llasg~~-------- 470 (502)
... ..++.+..+...+ .++++++.||.+++||..+++. +..+.. +.....-+.|..+|+..+++.+.
T Consensus 473 ~~~-~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~~tG~~--lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~ 548 (677)
T 1kb0_A 473 VEH-VSPWNGGTLTTAG-NVVFQGTADGRLVAYHAATGEK--LWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLA 548 (677)
T ss_dssp EEE-SSSCCCCEEEETT-TEEEEECTTSEEEEEETTTCCE--EEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHH
T ss_pred cCC-CCCCcCcceEeCC-CEEEEECCCCcEEEEECCCCce--eeeeeCCCCcccCCEEEEeCCEEEEEEeccCCcccccc
Confidence 653 3445555566666 6888899999999999999984 334332 22222345567788644544332
Q ss_pred --------CCcEEEEECCCCc
Q 010769 471 --------KGKLEIWDTLSDA 483 (502)
Q Consensus 471 --------dg~i~vwd~~~~~ 483 (502)
.+.+.+|.+....
T Consensus 549 ~~~~~~~~~~~l~~f~l~~~a 569 (677)
T 1kb0_A 549 ARATERQGPGTVYTFVVGGKA 569 (677)
T ss_dssp CCSCSCCCCCEEEEEEETCBC
T ss_pred ccccccCCCCeEEEEeccccc
Confidence 3678888886433
No 239
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.83 E-value=2.7e-07 Score=87.82 Aligned_cols=218 Identities=12% Similarity=0.063 Sum_probs=141.5
Q ss_pred CCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecC
Q 010769 209 GNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASAD 288 (502)
Q Consensus 209 ~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~D 288 (502)
+..|.+|+.++.|..++.. +..... ...+...+.++...++ + .|+.|+.+
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~---------------------------~~~~~~~~~~~~~~~~-g-~l~vgt~~ 156 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWR---------------------------FKTKKAIYATPIVSED-G-TIYVGSND 156 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEE---------------------------EECSSCCCSCCEECTT-S-CEEEECTT
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEE---------------------------EcCCCceeeeeEEcCC-C-EEEEEcCC
Confidence 5567778888999999876 322111 0112234556666666 3 36678888
Q ss_pred CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEE
Q 010769 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSF 368 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l 368 (502)
+.|..||.. ++.+..+......+.++...+++ . +..++ +.|..+| .++............+.++...+++ .+
T Consensus 157 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g-~-l~v~t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g--~l 228 (330)
T 3hxj_A 157 NYLYAINPD-GTEKWRFKTNDAITSAASIGKDG-T-IYFGS--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG--TI 228 (330)
T ss_dssp SEEEEECTT-SCEEEEEECSSCCCSCCEECTTC-C-EEEES--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS--CE
T ss_pred CEEEEECCC-CCEeEEEecCCCceeeeEEcCCC-E-EEEEe--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC--eE
Confidence 999999998 88777776556667777787777 4 44444 8899999 5443322112223457777787765 47
Q ss_pred EEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC
Q 010769 369 VVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK 448 (502)
Q Consensus 369 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~ 448 (502)
++++.++.|..++. ++ ..++.+......+.++.+.+++ .|..++.+|.|..+|. +++. +......
T Consensus 229 ~v~t~~~gl~~~~~-~g---------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~ggl~~~d~-~g~~--~~~~~~~ 293 (330)
T 3hxj_A 229 YVTSLDGHLYAINP-DG---------TEKWRFKTGKRIESSPVIGNTD--TIYFGSYDGHLYAINP-DGTE--KWNFETG 293 (330)
T ss_dssp EEEETTTEEEEECT-TS---------CEEEEEECSSCCCSCCEECTTS--CEEEECTTCEEEEECT-TSCE--EEEEECS
T ss_pred EEEcCCCeEEEECC-CC---------CEeEEeeCCCCccccceEcCCC--eEEEecCCCCEEEECC-CCcE--EEEEEcC
Confidence 77888888888874 32 4455555555545566666544 5777888888999996 5553 3333334
Q ss_pred CCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 449 AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 449 ~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
...+.++...+++. |..|+.+|.+++.....
T Consensus 294 ~~~~~~~~~d~~g~--l~~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 294 SWIIATPVIDENGT--IYFGTRNGKFYALFNLE 324 (330)
T ss_dssp SCCCSCCEECTTCC--EEEECTTSCEEEEEC--
T ss_pred CccccceEEcCCCE--EEEEcCCCeEEEEeccc
Confidence 45577778888886 55688999999887654
No 240
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.82 E-value=1e-07 Score=92.54 Aligned_cols=199 Identities=16% Similarity=0.168 Sum_probs=131.1
Q ss_pred eeEEec--CCCCcEEEEEecCCcEEEEECCCC----eeeEEec-------cCCCCeEEEEEcCCCCcEEEEEECC-----
Q 010769 270 LGLAWN--KEFRNILASASADKQVKIWDVAAG----KCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFD----- 331 (502)
Q Consensus 270 ~~l~~~--~~~~~~l~sgs~Dg~v~vwd~~~~----~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~~~d----- 331 (502)
.+..++ ++.+.++++|..+++|.|+|+.+. +.+.++. ........+...|++ +++++..+
T Consensus 85 ~~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g~~ 162 (462)
T 2ece_A 85 LCPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEGEG 162 (462)
T ss_dssp GSTTCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTSCS
T ss_pred cccccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCCCC
Confidence 344456 776667777888999999999755 6666663 111245667888998 66666555
Q ss_pred -CcEEEEeCCCCCCccceEeec-C---CeEEEEeCCCCCCEEEEEe-------------------CCCeEEEEECCCCCC
Q 010769 332 -RSVVMKDARISTHSGFKWAVA-A---DVESLAWDPHAEHSFVVSL-------------------EDGTIKGFDIRTAKS 387 (502)
Q Consensus 332 -g~i~vwd~~~~~~~~~~~~~~-~---~v~~v~~~p~~~~~l~~~~-------------------~dg~i~i~d~~~~~~ 387 (502)
|.|.++|..+.+... .+... . -...+.|+|++. .++++. ...+|.+||+.+.
T Consensus 163 ~g~v~vlD~~T~~v~~-~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~-- 238 (462)
T 2ece_A 163 PGGILMLDHYSFEPLG-KWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKR-- 238 (462)
T ss_dssp CCEEEEECTTTCCEEE-ECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTT--
T ss_pred CCeEEEEECCCCeEEE-EEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEECCCC--
Confidence 789999999887654 33222 1 123477899866 666663 3689999999875
Q ss_pred CCCCCCCCccEEEecC-C-CCeeEEEE--cCCCCCEEEEEe-----CCCcEEEEECCCCCeeEEEE--ecCC--------
Q 010769 388 DPDSTSQQSSFTLHAH-D-KAVCTISY--NPLVPNLLATGS-----TDKMVKLWDLSNNQPSCIAS--RNPK-------- 448 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~h-~-~~v~~l~~--sp~~~~~l~t~s-----~dg~i~vwd~~~~~~~~~~~--~~~~-------- 448 (502)
+.+.++... . .....+.| +|++...++++- .+++|.+|....+....... ....
T Consensus 239 -------k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 239 -------KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp -------EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCG
T ss_pred -------cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccc
Confidence 455555542 1 23445555 999844444555 67788887765543222221 1110
Q ss_pred --------CCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 449 --------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 449 --------~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
......|.++||+++|+++.-..+.|.+||+..
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d 352 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISN 352 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSS
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 234678999999999888777789999999963
No 241
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.80 E-value=4.7e-06 Score=81.27 Aligned_cols=210 Identities=6% Similarity=0.043 Sum_probs=138.2
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..+..|+|.+..+.++++-...+.|..+++..+.....+.........+++.+.+..++++-...+.|.+.++.......
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~ 195 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 195 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEE
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEE
Confidence 45789999987565666666778999999887654444433334566788887664677777777889888887543322
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...........++++|.+..++++-... +.|..+++... .........-.....|+|+|.+..+.++-+.
T Consensus 196 l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~---------~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~ 266 (386)
T 3v65_B 196 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS---------GRRIIADTHLFWPNGLTIDYAGRRMYWVDAK 266 (386)
T ss_dssp EECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEEGGGTEEEEEETT
T ss_pred eecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC---------CcEEEEECCCCCeeeEEEeCCCCEEEEEECC
Confidence 1212234578899999777556665555 78888887643 1222222233457899999876466666667
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.+.|..+++.......+ ..........+++.. + .++.+-...+.|..++..+++.+..+.
T Consensus 267 ~~~I~~~d~dG~~~~~~--~~~~~~~P~giav~~-~-~ly~td~~~~~V~~~~~~~G~~~~~i~ 326 (386)
T 3v65_B 267 HHVIERANLDGSHRKAV--ISQGLPHPFAITVFE-D-SLYWTDWHTKSINSANKFTGKNQEIIR 326 (386)
T ss_dssp TTEEEEECTTSCSCEEE--ECSSCSSEEEEEEET-T-EEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCEEEEEeCCCCeeEEE--EECCCCCceEEEEEC-C-EEEEeeCCCCeEEEEECCCCcceEEEc
Confidence 78899999876543222 222345677888833 3 467777778889999976766554443
No 242
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.78 E-value=1e-07 Score=91.61 Aligned_cols=212 Identities=9% Similarity=0.044 Sum_probs=126.0
Q ss_pred cceeeEEecCCCCcEEEEEe--cCCcEEEEECCCCeeeEEe-------ccCCCCeEEEEEcCCCCcEEEEEEC-----CC
Q 010769 267 DSVLGLAWNKEFRNILASAS--ADKQVKIWDVAAGKCNLTL-------EHHTDKVQAVAWNHHSPQILLSGSF-----DR 332 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs--~Dg~v~vwd~~~~~~~~~~-------~~h~~~v~~l~~~~~~~~~l~s~~~-----dg 332 (502)
..+..|++++++ .++++.. .++.++||.+.+++.. .+ ..|-..+..+++.+++ +++++-.. ++
T Consensus 17 ~~p~~va~~~~g-~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTPDG-RLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECTTS-CEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCC
T ss_pred CCcceEEECCCC-CEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCC
Confidence 578999999995 4777754 2343555655455532 22 2345689999999998 66555433 57
Q ss_pred cEEEEeCCCCCCccceEe------ecCCeEEEEeCCCCCCEEEEEe---CCCeEEEEECCCCCCCCCC------CCCCcc
Q 010769 333 SVVMKDARISTHSGFKWA------VAADVESLAWDPHAEHSFVVSL---EDGTIKGFDIRTAKSDPDS------TSQQSS 397 (502)
Q Consensus 333 ~i~vwd~~~~~~~~~~~~------~~~~v~~v~~~p~~~~~l~~~~---~dg~i~i~d~~~~~~~~~~------~~~~~~ 397 (502)
.|.+||+.+++....... ....+..+++++.+...+++.. .++.|.+||+.++...... ......
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~ 173 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDID 173 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCC
T ss_pred eEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccc
Confidence 899999987764332211 1234688999986554455554 6789999998765210000 000000
Q ss_pred EEEec--------------CCCCeeEEEEcCCCCCEEEEEeCCC-cEEEEECC---CCCe-----eEEEEecCCCCCEEE
Q 010769 398 FTLHA--------------HDKAVCTISYNPLVPNLLATGSTDK-MVKLWDLS---NNQP-----SCIASRNPKAGAVFS 454 (502)
Q Consensus 398 ~~~~~--------------h~~~v~~l~~sp~~~~~l~t~s~dg-~i~vwd~~---~~~~-----~~~~~~~~~~~~v~~ 454 (502)
....+ ....+..|+|+|++ +.|+.+...+ .|..++.. .... .......++.+....
T Consensus 174 ~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg-~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdg 252 (343)
T 2qe8_A 174 LVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAEN-EWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDG 252 (343)
T ss_dssp CEETTEECBEECTTSCEECCCCCEEEEEECTTS-CEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSC
T ss_pred eeECCEEEEeccCCCceeceecccceeEeccCC-CEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCce
Confidence 00000 01246889999998 7777766655 45444431 1110 000011122234567
Q ss_pred EEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 455 VAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 455 ~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
++++++|. ++++....+.|.+||..+++
T Consensus 253 ia~d~~G~-l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 253 ISIDKDHN-IYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp EEECTTCC-EEEEEGGGTEEEEEETTTTE
T ss_pred EEECCCCC-EEEEccCCCeEEEEECCCCC
Confidence 89999997 68888888999999985554
No 243
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.76 E-value=1.5e-05 Score=77.99 Aligned_cols=212 Identities=12% Similarity=0.054 Sum_probs=138.2
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCC----eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 341 (502)
...+..|+|.+..+.++.+-...+.|+.+++... .....+.........|++.+.+.+++++-...+.|.+.++..
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 4568899999875656666666788999998752 223333334456788999886547777777788999999876
Q ss_pred CCCccceEeecCCeEEEEeCCCCCCEEEEEeC-CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEE
Q 010769 342 STHSGFKWAVAADVESLAWDPHAEHSFVVSLE-DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~-dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
................++++|.+..++++-.. .+.|...++... .........-.....|++++.+..+.
T Consensus 191 ~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~---------~~~~~~~~~l~~P~glavd~~~~~lY 261 (400)
T 3p5b_L 191 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLY 261 (400)
T ss_dssp CSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC---------ccEEEEECCCCceEEEEEEeCCCEEE
Confidence 54333222233457899999976645554433 478888888643 22222223335678999998774555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
++-+..+.|..+|+.......+...........++++.. .+++.+-...+.|..++..+++.+..+
T Consensus 262 ~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v~~--~~lywtd~~~~~V~~~~~~~G~~~~~i 327 (400)
T 3p5b_L 262 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLL 327 (400)
T ss_dssp EEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEEET--TEEEEEESSSCSEEEEESSSCCCCEEE
T ss_pred EEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEEeC--CEEEEecCCCCeEEEEEcCCCCceEEE
Confidence 665667889999997665444443333345567787743 346777777789999997777665444
No 244
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.73 E-value=1.6e-05 Score=76.31 Aligned_cols=208 Identities=5% Similarity=0.052 Sum_probs=137.5
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..+..|+|.+..+.++.+-...+.|..+++..+.....+.........+++.+.+..++++-...+.|.+.++.......
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~ 152 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKV 152 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEE
Confidence 34789999987565666666778999999886654443433334567888987664777777778899999987544322
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEEe
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~s 424 (502)
...........++++|.+..++++-... +.|..+++... ....+ ...-.....|+++|.+..+.++-+
T Consensus 153 l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~----------~~~~~~~~~~~~PnGla~d~~~~~lY~aD~ 222 (349)
T 3v64_C 153 LLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS----------GRRIIADTHLFWPNGLTIDYAGRRMYWVDA 222 (349)
T ss_dssp EECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------SCEESCCSSCSCEEEEEEETTTTEEEEEET
T ss_pred EEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC----------CcEEEEECCCCCcceEEEeCCCCEEEEEEC
Confidence 1112234578899999777566665555 78988887643 11222 122345689999987746666666
Q ss_pred CCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 425 TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 425 ~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
..+.|..+++.......+. .........+++. .+ .++.+-...+.|..++..+++.+..+
T Consensus 223 ~~~~I~~~~~dG~~~~~~~--~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 223 KHHVIERANLDGSHRKAVI--SQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGKNQEII 282 (349)
T ss_dssp TTTEEEEEETTSCSCEEEE--CSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCEEEEEeCCCCceEEEE--eCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCCccEEe
Confidence 7788999998765432222 2234567788883 33 46777777788998886666655443
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.72 E-value=6.2e-06 Score=78.30 Aligned_cols=258 Identities=9% Similarity=-0.019 Sum_probs=143.3
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
|-++.| .++++++.++..++.|..|+...... ..+......... . ... .............+.+|
T Consensus 21 p~~i~~-------d~~g~~l~v~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~-~---~~~---g~~~~~~~~~~~~p~gi 85 (322)
T 2fp8_A 21 PNSFTF-------DSTNKGFYTSVQDGRVIKYEGPNSGF-VDFAYASPYWNK-A---FCE---NSTDAEKRPLCGRTYDI 85 (322)
T ss_dssp CCCEEC-------CTTCSSEEEECTTSEEEEECCTTTCE-EEEEESCTTCCH-H---HHT---TCCCGGGHHHHCCEEEE
T ss_pred ceEEEE-------cCCCCEEEEEcCCCeEEEECCCCCce-EEEecccccccc-c---ccc---cccchhccccCCCCceE
Confidence 455655 67888888888889999998764211 110000000000 0 000 00000000112357889
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEec----c-CCCCeEEEEEcC-CCCcEEEEEEC----------------
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLE----H-HTDKVQAVAWNH-HSPQILLSGSF---------------- 330 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~----~-h~~~v~~l~~~~-~~~~~l~s~~~---------------- 330 (502)
++.+..+ .|+.+...+.|..+|..++.. ..+. + .......+++.+ +| ++.++-..
T Consensus 86 ~~~~~~g-~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~ 162 (322)
T 2fp8_A 86 SYNLQNN-QLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSD 162 (322)
T ss_dssp EEETTTT-EEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTC
T ss_pred EEcCCCC-cEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccC
Confidence 9997324 455555555688898776543 2221 1 123578899999 88 66665432
Q ss_pred -CCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 331 -DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 331 -dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
.+.|..||..+..... ..........++|+|++..++++-+..+.|..|++..... .....+....+ ...
T Consensus 163 ~~g~v~~~d~~~~~~~~-~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~-------~~~~~~~~~~g-P~g 233 (322)
T 2fp8_A 163 KTGRLIKYDPSTKETTL-LLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKK-------GTAEVLVKIPN-PGN 233 (322)
T ss_dssp CCEEEEEEETTTTEEEE-EEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTT-------TCEEEEEECSS-EEE
T ss_pred CCceEEEEeCCCCEEEE-eccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcC-------CccceEEeCCC-CCC
Confidence 3678888876554322 2222345677999998764555556778999999875311 11111111223 788
Q ss_pred EEEcCCCCCEEEEEeC----------CCcEEEEECCCCCeeEEEEecC-C-CCCEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010769 410 ISYNPLVPNLLATGST----------DKMVKLWDLSNNQPSCIASRNP-K-AGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~----------dg~i~vwd~~~~~~~~~~~~~~-~-~~~v~~~~~spd~~~llasg~~dg~i~vw 477 (502)
+++.++| ++.++... .+.|..+|.. ++......... . ...++++++ .++. |+++....+.|.++
T Consensus 234 i~~d~~G-~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~~~~~~-~~g~-L~v~~~~~~~i~~~ 309 (322)
T 2fp8_A 234 IKRNADG-HFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHFEQIQE-HDGL-LYIGTLFHGSVGIL 309 (322)
T ss_dssp EEECTTS-CEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCCCEEEE-ETTE-EEEECSSCSEEEEE
T ss_pred eEECCCC-CEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccceEEEE-eCCE-EEEeecCCCceEEE
Confidence 9999988 66555543 4668888874 44322222221 1 234666666 3554 67666677889999
Q ss_pred ECCC
Q 010769 478 DTLS 481 (502)
Q Consensus 478 d~~~ 481 (502)
++..
T Consensus 310 ~~~~ 313 (322)
T 2fp8_A 310 VYDK 313 (322)
T ss_dssp EC--
T ss_pred eccc
Confidence 8754
No 246
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.69 E-value=1.4e-05 Score=75.14 Aligned_cols=231 Identities=14% Similarity=0.096 Sum_probs=136.5
Q ss_pred CCCcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccce
Q 010769 190 PAFPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSV 269 (502)
Q Consensus 190 ~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V 269 (502)
..+|..+.| +++++++++-...+.|..|+.+.. ... ... ....+
T Consensus 31 ~~~pegia~-------~~~g~lyv~d~~~~~I~~~d~~g~--~~~------------------------~~~---~~~~p 74 (306)
T 2p4o_A 31 NTFLENLAS-------APDGTIFVTNHEVGEIVSITPDGN--QQI------------------------HAT---VEGKV 74 (306)
T ss_dssp TCCEEEEEE-------CTTSCEEEEETTTTEEEEECTTCC--EEE------------------------EEE---CSSEE
T ss_pred CCCcceEEE-------CCCCCEEEEeCCCCeEEEECCCCc--eEE------------------------EEe---CCCCc
Confidence 355667777 678887777777889999887531 000 001 12358
Q ss_pred eeEEecCCCCcEEEEEec-CC-cEEEEECCCCeeeEEec-cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 270 LGLAWNKEFRNILASASA-DK-QVKIWDVAAGKCNLTLE-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 270 ~~l~~~~~~~~~l~sgs~-Dg-~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
.+|++.+++. ++++... ++ .|..++..+++...... ........++..+.+ ..+++-...+.|.++|........
T Consensus 75 ~gia~~~dG~-l~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v 152 (306)
T 2p4o_A 75 SGLAFTSNGD-LVATGWNADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSI 152 (306)
T ss_dssp EEEEECTTSC-EEEEEECTTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEE
T ss_pred eeEEEcCCCc-EEEEeccCCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeE
Confidence 8999999954 5554433 22 47777777776543222 112233455555544 455555468889999876432110
Q ss_pred c----------eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC
Q 010769 347 F----------KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 347 ~----------~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
. ....-.....+ +|++..++++-+..+.|..|++..... ......+.. ......+++.++|
T Consensus 153 ~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~------~~~~~~~~~-~~~P~gi~vd~dG 223 (306)
T 2p4o_A 153 WLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK------PGEPEIFVE-QTNIDDFAFDVEG 223 (306)
T ss_dssp EEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSC------BCCCEEEEE-SCCCSSEEEBTTC
T ss_pred EEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC------CCccEEEec-cCCCCCeEECCCC
Confidence 0 00011123444 677665666667788999999875200 011111211 1346789999998
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEc---CCCCcEEEEEe
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFS---EDSPFVLAIGG 469 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~s---pd~~~llasg~ 469 (502)
+++++....+.|.+++.. ++...+..........++++|. |++..|+++..
T Consensus 224 -~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 224 -NLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp -CEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred -CEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 777777778889999975 5432233333334568999998 88876666554
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.67 E-value=1.1e-06 Score=83.50 Aligned_cols=180 Identities=10% Similarity=0.006 Sum_probs=121.0
Q ss_pred EEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeEEEEe
Q 010769 281 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVESLAW 360 (502)
Q Consensus 281 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~ 360 (502)
.|..++.++.|..+|.. ++....+..+...+.++...+++ . +..++.++.|..+|.. +............+.++..
T Consensus 109 ~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g-~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~ 184 (330)
T 3hxj_A 109 ILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDG-T-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASI 184 (330)
T ss_dssp EEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTS-C-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEE
T ss_pred EEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCC-E-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEE
Confidence 67788889999999988 77776666555566777777766 4 6667888999999988 4433222222344566667
Q ss_pred CCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 361 DPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 361 ~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
.+++. +++++ +.|..|| .++ ...+........+.++...+++ .|..++.++.|..++. +++.
T Consensus 185 d~~g~--l~v~t--~~l~~~d-~~g---------~~~~~~~~~~~~~~~~~~~~~g--~l~v~t~~~gl~~~~~-~g~~- 246 (330)
T 3hxj_A 185 GKDGT--IYFGS--DKVYAIN-PDG---------TEKWNFYAGYWTVTRPAISEDG--TIYVTSLDGHLYAINP-DGTE- 246 (330)
T ss_dssp CTTCC--EEEES--SSEEEEC-TTS---------CEEEEECCSSCCCSCCEECTTS--CEEEEETTTEEEEECT-TSCE-
T ss_pred cCCCE--EEEEe--CEEEEEC-CCC---------cEEEEEccCCcceeceEECCCC--eEEEEcCCCeEEEECC-CCCE-
Confidence 66543 66666 8899999 554 5566666566778888888865 4566677788888875 3432
Q ss_pred EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 441 CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 441 ~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+.........+.++.+.+++. |..++.+|.|..+|. +++.+.
T Consensus 247 -~~~~~~~~~~~~~~~~~~~g~--l~v~t~~ggl~~~d~-~g~~~~ 288 (330)
T 3hxj_A 247 -KWRFKTGKRIESSPVIGNTDT--IYFGSYDGHLYAINP-DGTEKW 288 (330)
T ss_dssp -EEEEECSSCCCSCCEECTTSC--EEEECTTCEEEEECT-TSCEEE
T ss_pred -eEEeeCCCCccccceEcCCCe--EEEecCCCCEEEECC-CCcEEE
Confidence 333333333344566666775 566788888999996 555543
No 248
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.64 E-value=4.6e-06 Score=75.99 Aligned_cols=198 Identities=9% Similarity=-0.012 Sum_probs=127.9
Q ss_pred CCcceeeeecCCCCCCCCCCEEEEecC--CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccc
Q 010769 191 AFPLCMAWLDCPLKDREKGNFMAVGSM--EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDS 268 (502)
Q Consensus 191 ~~~~~~~w~~~~~~~s~~~~~la~g~~--dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 268 (502)
.+|..+.+ ++++.+.++.+. ++.|+++|+.++..+.... +..+ ..
T Consensus 21 ~f~~Gl~~-------~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~-------------------------l~~~-~f 67 (266)
T 2iwa_A 21 AFTQGLVY-------AENDTLFESTGLYGRSSVRQVALQTGKVENIHK-------------------------MDDS-YF 67 (266)
T ss_dssp CCEEEEEE-------CSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE-------------------------CCTT-CC
T ss_pred CCcccEEE-------eCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe-------------------------cCCC-cc
Confidence 34556666 676655555443 5799999998755433211 1111 11
Q ss_pred eeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce
Q 010769 269 VLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 348 (502)
...+++.. ..+.++.-.++.|.++|..+.+.+.++......-.. +++++..++ ++..++.|.++|..+.+.....
T Consensus 68 geGi~~~g--~~lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~g~g--lt~Dg~~l~-vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 68 GEGLTLLN--EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQMKDGWG--LATDGKILY-GSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEEEEEET--TEEEEEETTCSEEEEEETTTTEEEEEEECCSSSCCE--EEECSSSEE-EECSSSEEEEECTTTCCEEEEE
T ss_pred eEEEEEeC--CEEEEEEecCCEEEEEECCCCcEEEEEECCCCCeEE--EEECCCEEE-EECCCCeEEEEECCCCcEEEEE
Confidence 22455543 445566667899999999999999988532122233 445664444 5557899999999887655432
Q ss_pred Eeec-----CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC-------------CCCeeEE
Q 010769 349 WAVA-----ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------------DKAVCTI 410 (502)
Q Consensus 349 ~~~~-----~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h-------------~~~v~~l 410 (502)
.... ..++.+.|. ++ .+++....++.|.+.|..++ +.+..+... ....++|
T Consensus 143 ~Vg~~~~p~~~~nele~~-dg-~lyvn~~~~~~V~vID~~tg---------~V~~~I~~~g~~~~~~~~~~~~~~v~nGI 211 (266)
T 2iwa_A 143 NVKYNGHRVIRLNELEYI-NG-EVWANIWQTDCIARISAKDG---------TLLGWILLPNLRKKLIDEGFRDIDVLNGI 211 (266)
T ss_dssp ECEETTEECCCEEEEEEE-TT-EEEEEETTSSEEEEEETTTC---------CEEEEEECHHHHHHHHHTTCTTCCCEEEE
T ss_pred EECCCCcccccceeEEEE-CC-EEEEecCCCCeEEEEECCCC---------cEEEEEECCCcccccccccccccCceEEE
Confidence 2111 236677777 44 35555556889999999987 555555421 1356899
Q ss_pred EEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010769 411 SYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
+|+|++..+++|+...+.|.+.++...
T Consensus 212 a~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 212 AWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp EEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred EEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 999998788888888899988887654
No 249
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.59 E-value=9.3e-06 Score=73.16 Aligned_cols=182 Identities=10% Similarity=0.080 Sum_probs=120.3
Q ss_pred eeeEEecCCCCcEEEEEecCC--cEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 269 VLGLAWNKEFRNILASASADK--QVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 269 V~~l~~~~~~~~~l~sgs~Dg--~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
...|.|+ + +.++.+++.+| .|+++|+.+++.+.++.... ........+.+..+.++.-.++.+.+||..+.+...
T Consensus 45 tqGL~~~-~-~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~-~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ 121 (262)
T 3nol_A 45 TEGFFYR-N-GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK-RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVR 121 (262)
T ss_dssp EEEEEEE-T-TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT-TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred cceEEEE-C-CEEEEECCCCCCceEEEEECCCCcEEEEEecCC-ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEE
Confidence 4788898 4 46777777776 89999999999988886433 333322222343566666678999999999887665
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC--C---CCeeEEEEcCCCCCEEE
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--D---KAVCTISYNPLVPNLLA 421 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h--~---~~v~~l~~sp~~~~~l~ 421 (502)
.......-..+++ ++. .++.+..++.|.++|..+. +.+.++... . ..++.+.|. +| .+.+
T Consensus 122 -ti~~~~eG~glt~--dg~-~L~~SdGs~~i~~iDp~T~---------~v~~~I~V~~~g~~~~~lNELe~~-~G-~lya 186 (262)
T 3nol_A 122 -SFNYDGEGWGLTH--NDQ-YLIMSDGTPVLRFLDPESL---------TPVRTITVTAHGEELPELNELEWV-DG-EIFA 186 (262)
T ss_dssp -EEECSSCCCCEEE--CSS-CEEECCSSSEEEEECTTTC---------SEEEEEECEETTEECCCEEEEEEE-TT-EEEE
T ss_pred -EEECCCCceEEec--CCC-EEEEECCCCeEEEEcCCCC---------eEEEEEEeccCCccccccceeEEE-CC-EEEE
Confidence 3333333334443 455 4555555788999999886 445544432 2 334557776 44 5565
Q ss_pred EEeCCCcEEEEECCCCCeeEEEEecC----------CCCCEEEEEEcCCCCcEEEEE
Q 010769 422 TGSTDKMVKLWDLSNNQPSCIASRNP----------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 422 t~s~dg~i~vwd~~~~~~~~~~~~~~----------~~~~v~~~~~spd~~~llasg 468 (502)
..-.++.|.+.|..+++........+ .....+.|+|+|++..++++|
T Consensus 187 n~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 187 NVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 55568899999999998654444421 123578999999988656654
No 250
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.58 E-value=9.1e-05 Score=67.03 Aligned_cols=204 Identities=12% Similarity=0.146 Sum_probs=133.3
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc-CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
+-...+..|+|+|+++.++++...++.|...|+. ++.++++.. -....-.|++.+++ .++++.-.++.+.++++...
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~~~l~~~~v~~~ 101 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDN-QFVISDERDYAIYVISLTPN 101 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTT-EEEEEETTTTEEEEEEECTT
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCC-EEEEEECCCCcEEEEEcCCC
Confidence 4556799999999866566667788999999988 888777732 23567888998887 66666667788999887655
Q ss_pred CCcc--ceE-------eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-------ecCCCC
Q 010769 343 THSG--FKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-------HAHDKA 406 (502)
Q Consensus 343 ~~~~--~~~-------~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-------~~h~~~ 406 (502)
.... ... ........++|+|.+.. |+++.......+|.+..... ...+..+ ..+...
T Consensus 102 ~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~-L~va~E~~p~~i~~~~g~~~------~~~l~i~~~~~~~~~~~~~d 174 (255)
T 3qqz_A 102 SEVKILKKIKIPLQESPTNCGFEGLAYSRQDHT-FWFFKEKNPIEVYKVNGLLS------SNELHISKDKALQRQFTLDD 174 (255)
T ss_dssp CCEEEEEEEECCCSSCCCSSCCEEEEEETTTTE-EEEEEESSSEEEEEEESTTC------SSCCEEEECHHHHHTCCSSC
T ss_pred CeeeeeeeeccccccccccCCcceEEEeCCCCE-EEEEECcCCceEEEEccccc------CCceeeecchhhccccccCC
Confidence 4311 111 12344699999998764 44444444444444431100 0111111 113346
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC-------CCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK-------AGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~-------~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
+.+++++|....+++.....+.|.++|.... +.....+... ...--.|+|.++|+ ++++ +.-+.++++.-
T Consensus 175 ~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~-~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv-sE~n~~y~f~~ 251 (255)
T 3qqz_A 175 VSGAEFNQQKNTLLVLSHESRALQEVTLVGE-VIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV-SEPNRFYRFTP 251 (255)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEECTTCC-EEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE-ETTTEEEEEEC
T ss_pred ceeEEEcCCCCeEEEEECCCCeEEEEcCCCC-EEEEEEcCCccCCcccccCCCCeeEECCCCC-EEEE-cCCceEEEEEe
Confidence 7999999987677777777888999997754 5455555421 13568999999997 5554 66666666643
No 251
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.58 E-value=6.3e-06 Score=74.25 Aligned_cols=180 Identities=7% Similarity=-0.004 Sum_probs=123.0
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeE--EEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQ--AVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~--~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 345 (502)
-...|.|+. +.++.+.+.+|.|+++|+.+++.+.++ . ..... .+++. +..+.++.-.++.+.+||..+.+..
T Consensus 56 ftqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l-~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl~~~ 129 (268)
T 3nok_A 56 FTQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME-R-LGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPPQRE 129 (268)
T ss_dssp CEEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE-E-CTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTTEEE
T ss_pred ccceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE-C-CCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcCcEE
Confidence 347888874 468888889999999999999988877 3 23333 35554 4466777778999999999987766
Q ss_pred cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec--CCC---CeeEEEEcCCCCCEE
Q 010769 346 GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HDK---AVCTISYNPLVPNLL 420 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--h~~---~v~~l~~sp~~~~~l 420 (502)
.. +.....-..+++ ++. .|+++..++.|.++|..+. +.+.++.. +.. .++.+.|. +| .+.
T Consensus 130 ~t-i~~~~eGwGLt~--Dg~-~L~vSdGs~~l~~iDp~T~---------~v~~~I~V~~~g~~v~~lNeLe~~-dG-~ly 194 (268)
T 3nok_A 130 RT-TRYSGEGWGLCY--WNG-KLVRSDGGTMLTFHEPDGF---------ALVGAVQVKLRGQPVELINELECA-NG-VIY 194 (268)
T ss_dssp EE-EECSSCCCCEEE--ETT-EEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-EEE
T ss_pred EE-EeCCCceeEEec--CCC-EEEEECCCCEEEEEcCCCC---------eEEEEEEeCCCCcccccccccEEe-CC-EEE
Confidence 53 333333344554 344 5666667899999999886 44444443 222 34667777 44 555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCCEEEEEEcCCCCcEEEEE
Q 010769 421 ATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~llasg 468 (502)
+..-....|.+.|..+++......+.+ .....+.|+|+|++..+++||
T Consensus 195 anvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 195 ANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 555568899999999998544444321 224678999999887667765
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.57 E-value=2.4e-06 Score=89.71 Aligned_cols=242 Identities=10% Similarity=0.074 Sum_probs=139.7
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|++++.++.|..+|..+++.+....... .. ........++ +. + + .++.++.
T Consensus 116 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~----------------~~--~~~~~~~~P~----v~-~-~-~v~vg~~ 170 (668)
T 1kv9_A 116 WGDKVYVGTLDGRLIALDAKTGKAIWSQQTTD----------------PA--KPYSITGAPR----VV-K-G-KVIIGNG 170 (668)
T ss_dssp EBTEEEEECTTSEEEEEETTTCCEEEEEECSC----------------TT--SSCBCCSCCE----EE-T-T-EEEECCB
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEeeeeccCC----------------CC--CcceecCCCE----EE-C-C-EEEEeCC
Confidence 36778888999999999998765543221100 00 0000001111 11 2 3 4555543
Q ss_pred ------CCcEEEEECCCCeeeEEeccCC-------------------------------CCeEEEEEcCCCCcEEEEEEC
Q 010769 288 ------DKQVKIWDVAAGKCNLTLEHHT-------------------------------DKVQAVAWNHHSPQILLSGSF 330 (502)
Q Consensus 288 ------Dg~v~vwd~~~~~~~~~~~~h~-------------------------------~~v~~l~~~~~~~~~l~s~~~ 330 (502)
+|.|..+|..+|+.+.++.... .....+++.+.. .+++.++.
T Consensus 171 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~ 249 (668)
T 1kv9_A 171 GAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTG 249 (668)
T ss_dssp CTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECC
T ss_pred CCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCC
Confidence 5899999999999988774210 011246777776 67777776
Q ss_pred CC-------------------cEEEEeCCCCCCccceEee---------cCCeEEEEeCCCCC--CEEEEEeCCCeEEEE
Q 010769 331 DR-------------------SVVMKDARISTHSGFKWAV---------AADVESLAWDPHAE--HSFVVSLEDGTIKGF 380 (502)
Q Consensus 331 dg-------------------~i~vwd~~~~~~~~~~~~~---------~~~v~~v~~~p~~~--~~l~~~~~dg~i~i~ 380 (502)
++ .|..+|.++++..-..... ..+.....+..++. ..+++++.+|.++++
T Consensus 250 ~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 250 NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 65 3899999888754322111 02222222222332 258888999999999
Q ss_pred ECCCCCCCCCCCCCCccEEEecCC------------C------------------------CeeEEEEcCCCCCEEEEE-
Q 010769 381 DIRTAKSDPDSTSQQSSFTLHAHD------------K------------------------AVCTISYNPLVPNLLATG- 423 (502)
Q Consensus 381 d~~~~~~~~~~~~~~~~~~~~~h~------------~------------------------~v~~l~~sp~~~~~l~t~- 423 (502)
|..+++ .+....... . .-..++++|.. .+++..
T Consensus 330 D~~tG~---------~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~-g~~yv~~ 399 (668)
T 1kv9_A 330 DRTNGK---------LISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGT-GLVYIPY 399 (668)
T ss_dssp ETTTCC---------EEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTT-TEEEEEE
T ss_pred ECCCCC---------EeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCC-CEEEEec
Confidence 998873 221111000 0 01126777765 444431
Q ss_pred -----------------------------------eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEE
Q 010769 424 -----------------------------------STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 424 -----------------------------------s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg 468 (502)
..+|.|..||+.+++. +.....+ .+.....+...+. +++++
T Consensus 400 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~--~W~~~~~-~~~~~~~~~t~gg-~vf~g 475 (668)
T 1kv9_A 400 QEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKA--AWKVPYP-THWNGGTLSTAGN-LVFQG 475 (668)
T ss_dssp EECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEE--EEEEEES-SSCCCCEEEETTT-EEEEE
T ss_pred cccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcE--EEEccCC-CCCcCceeEeCCC-EEEEE
Confidence 1347899999999984 3333221 2222223334455 57778
Q ss_pred eCCCcEEEEECCCCccccccc
Q 010769 469 GSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 469 ~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.+|.|++||..+++.+.+.-
T Consensus 476 ~~dg~l~a~d~~tG~~l~~~~ 496 (668)
T 1kv9_A 476 TAAGQMHAYSADKGEALWQFE 496 (668)
T ss_dssp CTTSEEEEEETTTCCEEEEEE
T ss_pred CCcccchhhhhhcChhheEec
Confidence 999999999999999886553
No 253
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.57 E-value=6.1e-05 Score=79.86 Aligned_cols=212 Identities=12% Similarity=0.064 Sum_probs=137.2
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCC----eeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAG----KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~----~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~ 341 (502)
...+..|+|.+..+.++++-...+.|+.+++... .....+.........|++.+.+.+++++-...+.|.+.++..
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG 502 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 502 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCC
Confidence 3567889999865656666667788999998753 223333333456778899887757777777789999999876
Q ss_pred CCCccceEeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEE
Q 010769 342 STHSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
................|+++|....++++-... +.|...++... .....+...-.....|++.+...+++
T Consensus 503 ~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~---------~~~~lv~~~l~~P~GLavD~~~~~LY 573 (791)
T 3m0c_C 503 VKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLY 573 (791)
T ss_dssp SSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------CEEEEECSSCSCEEEEEEETTTTEEE
T ss_pred CeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC---------ceEEEEeCCCCCceEEEEecCCCeEE
Confidence 543332222334578999999766455554333 78888888643 22222233335688999998764555
Q ss_pred EEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 421 ATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
++=...+.|..+++.......+...........+|++..+ +|+.+-...+.|...+..+++.+..+
T Consensus 574 waD~~~~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~~~--~lYwtD~~~~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 574 WVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 639 (791)
T ss_dssp EEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEETT--EEEEEETTTTEEEEEETTTCCCCEEE
T ss_pred EEeCCCCcEEEEecCCCceEEEecCCCccCCCCEEEEeCC--EEEEEECCCCEEEEEeCCCCcceEEe
Confidence 5555677899999977654444333233344667777443 46777777788998888777665544
No 254
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.56 E-value=5e-06 Score=87.27 Aligned_cols=277 Identities=9% Similarity=-0.016 Sum_probs=142.4
Q ss_pred cccccC-CCceEEEEEecCCc------ceeEEEEEecCCCCCCceeeeeccccCCCcce--eeeecCCCCCCCCCCEEEE
Q 010769 144 DMTINP-NDAVIVCARNEDDV------SHLEVYILEESDGGDPNLYVHHHIIIPAFPLC--MAWLDCPLKDREKGNFMAV 214 (502)
Q Consensus 144 ~~~~~p-~~~~l~~~~~~~~~------~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~w~~~~~~~s~~~~~la~ 214 (502)
.+++.| ++++++.|+...+. ..-.++.|+.....-..+. ....+....| ... ..+++++++
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~---~~~~~~~~~~~~~~~-------~~~g~lyv~ 259 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT---VTVTKHDMFCPGISM-------DGNGQIVVT 259 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE---EEECSCCCSSCEEEE-------CTTSCEEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc---ccCCCCCCccccccC-------CCCCCEEEe
Confidence 556677 88888888754421 2236788877665211111 1111111122 222 468999999
Q ss_pred ecC-CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe-cC----
Q 010769 215 GSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS-AD---- 288 (502)
Q Consensus 215 g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs-~D---- 288 (502)
|+. ++.+++||..+..- . ....+. ....-.++...++ +.+++.|+ .+
T Consensus 260 GG~~~~~v~~yd~~t~~W-~------------------------~~~~~~-~~R~~~s~~~~~d-g~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 260 GGNDAKKTSLYDSSSDSW-I------------------------PGPDMQ-VARGYQSSATMSD-GRVFTIGGSWSGGVF 312 (656)
T ss_dssp CSSSTTCEEEEEGGGTEE-E------------------------ECCCCS-SCCSSCEEEECTT-SCEEEECCCCCSSSC
T ss_pred CCCCCCceEEecCcCCce-e------------------------ECCCCC-ccccccceEEecC-CeEEEEeCcccCCcc
Confidence 985 45899999763210 0 000000 1111123445556 45777777 34
Q ss_pred -CcEEEEECCCCeeeEEe----ccCCCCeEEEEEcCCCCcEEEEEECCC---------cEEEEeCCCCCCccceEeec--
Q 010769 289 -KQVKIWDVAAGKCNLTL----EHHTDKVQAVAWNHHSPQILLSGSFDR---------SVVMKDARISTHSGFKWAVA-- 352 (502)
Q Consensus 289 -g~v~vwd~~~~~~~~~~----~~h~~~v~~l~~~~~~~~~l~s~~~dg---------~i~vwd~~~~~~~~~~~~~~-- 352 (502)
..+.+||..+++....- ......-....+..++ .+++.|+.+| .+..||..+..-........
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~-~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~ 391 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDN-HAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSN 391 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTC-SCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEET
T ss_pred cccceEeCCCCCcceeCCCccccccccccccceeecCC-ceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccc
Confidence 57999999887643320 0000000001122333 4555565544 46778877654221111111
Q ss_pred -------CCeEEEEeCCCCCCEEEEEeCCC-----------eEEEEECCCCCCCCCCCCCCccEEE---ecCCC-CeeEE
Q 010769 353 -------ADVESLAWDPHAEHSFVVSLEDG-----------TIKGFDIRTAKSDPDSTSQQSSFTL---HAHDK-AVCTI 410 (502)
Q Consensus 353 -------~~v~~v~~~p~~~~~l~~~~~dg-----------~i~i~d~~~~~~~~~~~~~~~~~~~---~~h~~-~v~~l 410 (502)
..-.++.|...+..++++|+.++ .|.+||..+. . ...+ ..+.. .-.++
T Consensus 392 ~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~---------~-W~~~~~~~mp~~R~~~~~ 461 (656)
T 1k3i_A 392 RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTS---------P-NTVFASNGLYFARTFHTS 461 (656)
T ss_dssp TEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSC---------C-EEEECTTCCSSCCBSCEE
T ss_pred cccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCC---------C-eeEEccCCCCCCcccCCe
Confidence 12344555444455777777532 5777776653 1 1111 11222 22344
Q ss_pred EEcCCCCCEEEEEeCC-----------CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeC
Q 010769 411 SYNPLVPNLLATGSTD-----------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGS 470 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~d-----------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~ 470 (502)
...|++ ++++.|+.+ ..+.+||..+.+...+...........+..+.|+++ ++++||.
T Consensus 462 ~~l~~g-~i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~-v~v~GG~ 530 (656)
T 1k3i_A 462 VVLPDG-STFITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGR-VFNGGGG 530 (656)
T ss_dssp EECTTS-CEEEECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSC-EEEEECC
T ss_pred EECCCC-CEEEECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcE-EEecCCC
Confidence 566777 888888754 468999998876433322222222233455679998 6888875
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.55 E-value=0.00017 Score=77.36 Aligned_cols=198 Identities=10% Similarity=0.117 Sum_probs=130.6
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEec-------cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEe
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 338 (502)
...|.++...+++. |..|+.. -|.+|+..+++...... .....|.++...++| . |-.|+.++-|..|+
T Consensus 262 ~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g-~-lWigt~~~Gl~~~~ 336 (795)
T 4a2l_A 262 SNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQG-G-MWLGTYFGGLNYYH 336 (795)
T ss_dssp CSBEEEEEECTTSC--EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTS-C-EEEEESSSCEEEEC
T ss_pred CCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCc-C-EEEEECCCCeEEeC
Confidence 35699999888743 4445555 58999988776543321 123579999999887 4 66678888899998
Q ss_pred CCCCCCccceE------eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe---------cC
Q 010769 339 ARISTHSGFKW------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AH 403 (502)
Q Consensus 339 ~~~~~~~~~~~------~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---------~h 403 (502)
........... .....|.++...+++. +.+|+.++-|..|+..+.. ...+. ..
T Consensus 337 ~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~--lWiGt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~~~l~ 404 (795)
T 4a2l_A 337 PIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKN--LWIGTNDGGLNLYNPITQR----------FTSYTLQEDESARGIG 404 (795)
T ss_dssp GGGGSSEEECCCTTSSSCSCSSEEEEEECTTSC--EEEEESSSCEEEECTTTCC----------EEEECCC------CCS
T ss_pred CCcccceEEcCCCCCCCCCCCeeEEEEECCCCC--EEEEECCCCeEEEcCCCCc----------EEEEecCCCCcccCCC
Confidence 76543221110 1234588998888654 7788888889999987541 11111 12
Q ss_pred CCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEec--CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 404 DKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 404 ~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~--~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
...|.++...+++ .+|..|+.++.|.+||..+++........ .....|.++...+++. +.+ |+. +.|.+|+..+
T Consensus 405 ~~~v~~i~~d~~g-~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-lwi-gt~-~Gl~~~~~~~ 480 (795)
T 4a2l_A 405 SNNIKAVYVDEKK-SLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGN-LWL-GTL-SALVRFNPEQ 480 (795)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSC-EEE-EES-SCEEEEETTT
T ss_pred CccEEEEEEcCCC-CEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCC-EEE-Eec-CceeEEeCCC
Confidence 4568899888876 64667777777999999887632221100 2345799999999887 343 444 4588999876
Q ss_pred Ccc
Q 010769 482 DAG 484 (502)
Q Consensus 482 ~~~ 484 (502)
+..
T Consensus 481 ~~~ 483 (795)
T 4a2l_A 481 RSF 483 (795)
T ss_dssp TEE
T ss_pred CeE
Confidence 543
No 256
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.53 E-value=2.7e-05 Score=69.55 Aligned_cols=183 Identities=12% Similarity=0.084 Sum_probs=121.2
Q ss_pred cceeeEEecCCCCcEEEEEecCC--cEEEEECCCCeeeEEeccCCCC-eEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC
Q 010769 267 DSVLGLAWNKEFRNILASASADK--QVKIWDVAAGKCNLTLEHHTDK-VQAVAWNHHSPQILLSGSFDRSVVMKDARIST 343 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg--~v~vwd~~~~~~~~~~~~h~~~-v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~ 343 (502)
.-...|.|++. .++.+.+..| .|+++|+.+++.+.++...... --.++.. +..+++..-.++.+.+||..+.+
T Consensus 21 ~ftqGL~~~~~--~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLRG--HLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEETT--EEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEECC--EEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEECCcCc
Confidence 44668999863 4666766654 8999999999998887543221 1234443 43666667778999999999877
Q ss_pred CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec--CC---CCeeEEEEcCCCCC
Q 010769 344 HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HD---KAVCTISYNPLVPN 418 (502)
Q Consensus 344 ~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--h~---~~v~~l~~sp~~~~ 418 (502)
... .......-..+++ ++. .++++..++.|.++|..+. +.+.++.. +. ..++.+.+. +| .
T Consensus 97 ~~~-ti~~~~~Gwglt~--dg~-~L~vSdgs~~l~~iDp~t~---------~~~~~I~V~~~g~~~~~lNeLe~~-~G-~ 161 (243)
T 3mbr_X 97 PRA-RFRYPGEGWALTS--DDS-HLYMSDGTAVIRKLDPDTL---------QQVGSIKVTAGGRPLDNLNELEWV-NG-E 161 (243)
T ss_dssp EEE-EEECSSCCCEEEE--CSS-CEEEECSSSEEEEECTTTC---------CEEEEEECEETTEECCCEEEEEEE-TT-E
T ss_pred EEE-EEeCCCCceEEee--CCC-EEEEECCCCeEEEEeCCCC---------eEEEEEEEccCCcccccceeeEEe-CC-E
Confidence 655 3333334445554 345 4555666889999999886 44444443 22 244566666 34 5
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecC-----------CCCCEEEEEEcCCCCcEEEEE
Q 010769 419 LLATGSTDKMVKLWDLSNNQPSCIASRNP-----------KAGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~-----------~~~~v~~~~~spd~~~llasg 468 (502)
+.+..-.+..|.+.|..+++......+.+ .....+.|+++|++..+++||
T Consensus 162 lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 162 LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 55555567889999999998554444331 123578999999888666665
No 257
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.52 E-value=9.4e-05 Score=69.85 Aligned_cols=208 Identities=10% Similarity=0.092 Sum_probs=135.5
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeee-EEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCN-LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS 345 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~-~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~ 345 (502)
..+..|.|.+..+.++.+-...+.|..+++..+... ..+...-.....+++.+.+..++++-...+.|.++++......
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~ 114 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK 114 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE
Confidence 356789999875656666677789999998766321 2222223456778888766477777777889999998754332
Q ss_pred cceEeecCCeEEEEeCCCCCCEEEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEE
Q 010769 346 GFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
............++++|.+..++++-. ..+.|..+++... ....+ ...-...+.|+++|.+..+.++-
T Consensus 115 ~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~----------~~~~~~~~~l~~Pnglavd~~~~~lY~aD 184 (318)
T 3sov_A 115 VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS----------SRFIIINSEIYWPNGLTLDYEEQKLYWAD 184 (318)
T ss_dssp EEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC----------SCEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC----------CeEEEEECCCCCccEEEEeccCCEEEEEE
Confidence 222123345788999987664444442 3678888887643 12222 22234568999999764666666
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+..+.|..+++.......+. .........+++..+ .++.+-...+.|..++..+++.+..+
T Consensus 185 ~~~~~I~~~d~dG~~~~~~~--~~~~~~P~glav~~~--~lywtd~~~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 185 AKLNFIHKSNLDGTNRQAVV--KGSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREI 245 (318)
T ss_dssp TTTTEEEEEETTSCSCEEEE--CSCCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCCCEEEEEcCCCCceEEEe--cCCCCCceEEEEeCC--EEEEEecCCCeEEEEECCCCCceEEE
Confidence 67788999999765432332 223455778888643 36777677789999999887765444
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.51 E-value=0.0002 Score=68.59 Aligned_cols=241 Identities=10% Similarity=0.006 Sum_probs=142.5
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCC-CCCEEEEecCCC
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDRE-KGNFMAVGSMEP 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~-~~~~la~g~~dg 219 (502)
...+....+. .+|+.+... .|+.++.... .+.... .....|..++| .+ ++.++.+-...+
T Consensus 35 ~~~C~~~~~~-~~ll~~~~~------~I~~i~~~g~---~~~~~~--~~~~~~~~l~~-------d~~~~~ly~~D~~~~ 95 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANRI------DIRQVLPHRS---EYTLLL--NNLENAIALDF-------HHRRELVFWSDVTLD 95 (349)
T ss_dssp SSCEEESSSC-CEEEEECBS------CEEEECTTSC---CEEEEE--CSCSCEEEEEE-------ETTTTEEEEEETTTT
T ss_pred CCcccccccC-ceeEeeccc------ceEEEeCCCC---eeEEee--cCCCceEEEEE-------eccccEEEEEeccCC
Confidence 4455566664 444444333 4555554432 111111 11233566676 44 455555656678
Q ss_pred cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCC
Q 010769 220 AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAG 299 (502)
Q Consensus 220 ~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~ 299 (502)
.|..++++...... ...........|++.+.+++++++-...+.|.+.++...
T Consensus 96 ~I~r~~~~g~~~~~---------------------------~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 148 (349)
T 3v64_C 96 RILRANLNGSNVEE---------------------------VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA 148 (349)
T ss_dssp EEEEEETTSCSCEE---------------------------EECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred ceEEEecCCCCceE---------------------------EEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCC
Confidence 89888886422100 001112345788888765667777777789999998755
Q ss_pred eeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-CcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEE
Q 010769 300 KCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIK 378 (502)
Q Consensus 300 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~ 378 (502)
.....+...-.....+++.|.+..++++-... +.|..+++............-.....++|+|.+..++++-...+.|.
T Consensus 149 ~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~ 228 (349)
T 3v64_C 149 HRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIE 228 (349)
T ss_dssp SCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred ceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEE
Confidence 43333333445678999999774666665555 78888888754332211122345788999987776666667788999
Q ss_pred EEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 379 GFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
.+++... .....+........++++. .+ .++++-...+.|..++..+++
T Consensus 229 ~~~~dG~---------~~~~~~~~~~~~P~giav~-~~-~ly~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 229 RANLDGS---------HRKAVISQGLPHPFAITVF-ED-SLYWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEETTSC---------SCEEEECSSCSSEEEEEEE-TT-EEEEEETTTTEEEEEETTTCC
T ss_pred EEeCCCC---------ceEEEEeCCCCCceEEEEE-CC-EEEEecCCCCeEEEEEccCCC
Confidence 9998643 2222222234456777774 23 666666677888888855554
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.48 E-value=0.00015 Score=77.88 Aligned_cols=279 Identities=10% Similarity=0.137 Sum_probs=165.5
Q ss_pred cccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeec-cccCCCcceeeeecCCCCCCCCCCEEEEecCCCc
Q 010769 142 LEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH-IIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEPA 220 (502)
Q Consensus 142 v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~-~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg~ 220 (502)
|.++...+++++.+++. . .|+.|+.... .+..... ........++.. .++++ |.+|+.++-
T Consensus 133 i~~i~~d~~g~lwi~t~--~-----gl~~~~~~~~---~~~~~~~~~~~~~~i~~i~~-------d~~g~-lwigt~~~G 194 (795)
T 4a2l_A 133 VNGIEEISPEQLLISTP--E-----GLIMFDIKES---KFIDDSFSTAMHKTIASTLY-------RQGDQ-IYIGTSTDG 194 (795)
T ss_dssp CCEEEEEETTEEEEEET--T-----EEEEEETTTT---EEECSSSCHHHHTCCEEEEE-------EETTE-EEEEESSSC
T ss_pred EEEEEECCCCCEEEEEC--C-----ceEEEECCCC---EEEeccCCCCCCcceEEEEE-------CCCCC-EEEEECCCC
Confidence 77888888888776553 3 5777775543 2221111 000000122221 23455 444666555
Q ss_pred EEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCe
Q 010769 221 IEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGK 300 (502)
Q Consensus 221 I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~ 300 (502)
|..|+........ . ....+...|.++...++ + .|..|+.++-|.+|+..+++
T Consensus 195 l~~~~~~~~~~~~------------------------~--~~~~~~~~i~~i~~d~~-g-~lwigt~~~Gl~~~~~~~~~ 246 (795)
T 4a2l_A 195 LYTYSITQKTFEK------------------------V--IPILGTKQIQAILQQSP-T-RIWVATEGAGLFLINPKTKE 246 (795)
T ss_dssp EEEEETTTCCEEE------------------------C--C----CCCEEEEEEEET-T-EEEEEEBSSCEEEEETTTTE
T ss_pred EEEEeCCCCeEEE------------------------e--cCCCCCCeeEEEEEcCC-C-CEEEEECCCCeEEEeCCCCe
Confidence 8888865321100 0 00113456888887776 3 35556655559999988776
Q ss_pred eeEEecc-------CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-------eecCCeEEEEeCCCCCC
Q 010769 301 CNLTLEH-------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW-------AVAADVESLAWDPHAEH 366 (502)
Q Consensus 301 ~~~~~~~-------h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-------~~~~~v~~v~~~p~~~~ 366 (502)
....... ....|.++...+++ . |..|+.. -|.+|+..+........ -....|.++...+++.
T Consensus 247 ~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~- 322 (795)
T 4a2l_A 247 IKNYLHSPSNPKSISSNYIRSLAMDSQN-R-LWIGTFN-DLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGG- 322 (795)
T ss_dssp EEEECCCTTCTTSCSCSBEEEEEECTTS-C-EEEEESS-CEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSC-
T ss_pred EEEeecCCCCccccCCCeEEEEEEcCCC-C-EEEEeCC-hhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcC-
Confidence 5432221 23579999998887 4 4455555 58889877554322110 1234689999988764
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe-------cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010769 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 367 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-------~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
+.+|+.++-|..|+..+.. ...+. .....|.++...+++ .|-.|+.++-|..|+..+++.
T Consensus 323 -lWigt~~~Gl~~~~~~~~~----------~~~~~~~~~~~~l~~~~V~~i~~d~~g--~lWiGt~~~Gl~~~~~~~~~~ 389 (795)
T 4a2l_A 323 -MWLGTYFGGLNYYHPIRNR----------FKNIRNIPYKNSLSDNVVSCIVEDKDK--NLWIGTNDGGLNLYNPITQRF 389 (795)
T ss_dssp -EEEEESSSCEEEECGGGGS----------SEEECCCTTSSSCSCSSEEEEEECTTS--CEEEEESSSCEEEECTTTCCE
T ss_pred -EEEEECCCCeEEeCCCccc----------ceEEcCCCCCCCCCCCeeEEEEECCCC--CEEEEECCCCeEEEcCCCCcE
Confidence 7788888889999876431 11111 124568899888866 355677777799999887763
Q ss_pred eEEEEe------cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 440 SCIASR------NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 440 ~~~~~~------~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
...... ......|.++...+++. +|..|+.++.|.+|+..+++.
T Consensus 390 ~~~~~~~~~~~~~l~~~~v~~i~~d~~g~-~lWigt~~~Gl~~~d~~~~~~ 439 (795)
T 4a2l_A 390 TSYTLQEDESARGIGSNNIKAVYVDEKKS-LVYIGTHAGGLSILHRNSGQV 439 (795)
T ss_dssp EEECCC------CCSCSCEEEEEEETTTT-EEEEEETTTEEEEEETTTCCE
T ss_pred EEEecCCCCcccCCCCccEEEEEEcCCCC-EEEEEeCcCceeEEeCCCCcE
Confidence 222111 11235799999988887 355677777799999887653
No 260
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=98.46 E-value=1.6e-06 Score=91.20 Aligned_cols=211 Identities=12% Similarity=0.067 Sum_probs=128.6
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCC----CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAA----GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~----~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
..+..|+|.+..+.++++-...+.|+.+++.. ......+.........|++.+.+.+++++-...+.|.++++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 45678899987554555555668899999875 22222222222345678888665466666667789999998754
Q ss_pred CCccceEeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEE
Q 010769 343 THSGFKWAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLA 421 (502)
Q Consensus 343 ~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~ 421 (502)
...............++++|.+..++++-... +.|..+++... .....+...-...+.|+|+|.+..+++
T Consensus 486 ~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~---------~~~~l~~~~l~~PnGlavd~~~~~LY~ 556 (699)
T 1n7d_A 486 KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV---------DIYSLVTENIQWPNGITLDLLSGRLYW 556 (699)
T ss_dssp CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC---------CCCEESCSSCSSCCCEEECTTTCCEEE
T ss_pred ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCC---------CeeEEEeCCCCCccEEEEeccCCEEEE
Confidence 33221111224467888998766555544333 67887776532 111111122345678999998757777
Q ss_pred EEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 422 TGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 422 t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+-+..+.|.++++.......+............|++..+ +++++....+.|..++..+++.+..+
T Consensus 557 aD~~~~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~~~d~~~G~~~~~i 621 (699)
T 1n7d_A 557 VDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIFSANRLTGSDVNLL 621 (699)
T ss_dssp EETTTTEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEEEEETTTEEEEECC
T ss_pred EecCCCeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEEEEEccCCCceEEe
Confidence 777788899999976543333222222233445666554 46777777789999998877765544
No 261
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.45 E-value=0.00015 Score=70.67 Aligned_cols=202 Identities=10% Similarity=0.006 Sum_probs=126.6
Q ss_pred CcceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccccee
Q 010769 192 FPLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL 270 (502)
Q Consensus 192 ~~~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~ 270 (502)
.|..++| .+ ++.++.+-...+.|..++++.... . . ..........
T Consensus 117 ~~~gl~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~-~--~------------------------~~~~~~~~p~ 162 (386)
T 3v65_B 117 NAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNV-E--E------------------------VVSTGLESPG 162 (386)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCCE-E--E------------------------EECSSCSCCC
T ss_pred ccEEEEE-------ecCCCeEEEEeCCCCcEEEEecCCCCc-E--E------------------------EEeCCCCCcc
Confidence 3566776 44 455666666678898888864210 0 0 0011123456
Q ss_pred eEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-CcEEEEeCCCCCCccceE
Q 010769 271 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSGFKW 349 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~~~~ 349 (502)
.|++.+.+++++++-...+.|.+.++........+...-.....|++.|.+..++++-... +.|..+++..........
T Consensus 163 glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~ 242 (386)
T 3v65_B 163 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIAD 242 (386)
T ss_dssp CEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC
T ss_pred EEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEE
Confidence 7888876566777777778899998875443333443446788999999774656655555 788888876543322111
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcE
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMV 429 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i 429 (502)
..-.....++|+|.+..++++-+..+.|..+++... .....+........+|++.. + .++++-...+.|
T Consensus 243 ~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~---------~~~~~~~~~~~~P~giav~~-~-~ly~td~~~~~V 311 (386)
T 3v65_B 243 THLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS---------HRKAVISQGLPHPFAITVFE-D-SLYWTDWHTKSI 311 (386)
T ss_dssp SSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC---------SCEEEECSSCSSEEEEEEET-T-EEEEEETTTTEE
T ss_pred CCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC---------eeEEEEECCCCCceEEEEEC-C-EEEEeeCCCCeE
Confidence 223347889999877766666677888999998643 22222222344567788743 3 677777778889
Q ss_pred EEEECCCCC
Q 010769 430 KLWDLSNNQ 438 (502)
Q Consensus 430 ~vwd~~~~~ 438 (502)
..++..+++
T Consensus 312 ~~~~~~~G~ 320 (386)
T 3v65_B 312 NSANKFTGK 320 (386)
T ss_dssp EEEETTTCC
T ss_pred EEEECCCCc
Confidence 999865554
No 262
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.40 E-value=8e-05 Score=70.49 Aligned_cols=242 Identities=8% Similarity=-0.003 Sum_probs=134.9
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeec------------------cccCCCcceeeeecCC
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHH------------------IIIPAFPLCMAWLDCP 202 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~------------------~~~~~~~~~~~w~~~~ 202 (502)
.-+.+++.|+++++.++...+ .|+.|+.... .+..... ......|.++.+
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~-----~i~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~---- 87 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDG-----RVIKYEGPNS---GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISY---- 87 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTS-----EEEEECCTTT---CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEE----
T ss_pred CceEEEEcCCCCEEEEEcCCC-----eEEEECCCCC---ceEEEecccccccccccccccchhccccCCCCceEEE----
Confidence 346788999999787777665 7888865543 2221110 001123555554
Q ss_pred CCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCC-cccceeeEEecC-CCC
Q 010769 203 LKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGS-HTDSVLGLAWNK-EFR 279 (502)
Q Consensus 203 ~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-h~~~V~~l~~~~-~~~ 279 (502)
.+ +++++++.. .+.|.+++...... .. +.. ...+ .......+++.+ ++
T Consensus 88 ---~~~~g~l~v~d~-~~~i~~~d~~~g~~-~~---~~~--------------------~~~~~~~~~p~~i~~d~~~G- 138 (322)
T 2fp8_A 88 ---NLQNNQLYIVDC-YYHLSVVGSEGGHA-TQ---LAT--------------------SVDGVPFKWLYAVTVDQRTG- 138 (322)
T ss_dssp ---ETTTTEEEEEET-TTEEEEECTTCEEC-EE---EES--------------------EETTEECSCEEEEEECTTTC-
T ss_pred ---cCCCCcEEEEEC-CCCEEEEeCCCCEE-EE---ecc--------------------cCCCCcccccceEEEecCCC-
Confidence 45 565544433 34477777653210 00 000 0001 123467899999 74
Q ss_pred cEEEEEec-----------------CCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 280 NILASASA-----------------DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 280 ~~l~sgs~-----------------Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
++.++-.. .+.|..||..+++....... -.....|+|++++..++++-+..+.|.+|++...
T Consensus 139 ~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~ 217 (322)
T 2fp8_A 139 IVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGP 217 (322)
T ss_dssp CEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSST
T ss_pred EEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCCCeEEEEECCCC
Confidence 45554322 36788999877764332221 2345679999998335555566789999998753
Q ss_pred CCc--cceEeecCCeEEEEeCCCCCCEEEEEeC----------CCeEEEEECCCCCCCCCCCCCCccEEEecCC----CC
Q 010769 343 THS--GFKWAVAADVESLAWDPHAEHSFVVSLE----------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD----KA 406 (502)
Q Consensus 343 ~~~--~~~~~~~~~v~~v~~~p~~~~~l~~~~~----------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~----~~ 406 (502)
... .......+ ...+++.+++. ++++... .+.|..+|.. + ..+..+.... ..
T Consensus 218 ~~~~~~~~~~~~g-P~gi~~d~~G~-l~va~~~~~~~~~~~~~~~~v~~~d~~-G---------~~~~~~~~~~g~~~~~ 285 (322)
T 2fp8_A 218 KKGTAEVLVKIPN-PGNIKRNADGH-FWVSSSEELDGNMHGRVDPKGIKFDEF-G---------NILEVIPLPPPFAGEH 285 (322)
T ss_dssp TTTCEEEEEECSS-EEEEEECTTSC-EEEEEEEETTSSTTSCEEEEEEEECTT-S---------CEEEEEECCTTTTTSC
T ss_pred cCCccceEEeCCC-CCCeEECCCCC-EEEEecCcccccccCCCccEEEEECCC-C---------CEEEEEECCCCCcccc
Confidence 221 11112233 77899999875 5554433 4668888764 2 3444444332 34
Q ss_pred eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCC
Q 010769 407 VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQ 438 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~ 438 (502)
++++++. .+ .++++....+.|.++++....
T Consensus 286 ~~~~~~~-~g-~L~v~~~~~~~i~~~~~~~~~ 315 (322)
T 2fp8_A 286 FEQIQEH-DG-LLYIGTLFHGSVGILVYDKKG 315 (322)
T ss_dssp CCEEEEE-TT-EEEEECSSCSEEEEEEC----
T ss_pred ceEEEEe-CC-EEEEeecCCCceEEEeccccc
Confidence 6667663 33 666666677889999886544
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.39 E-value=8.2e-05 Score=76.38 Aligned_cols=242 Identities=9% Similarity=0.014 Sum_probs=135.7
Q ss_pred CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec
Q 010769 208 KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA 287 (502)
Q Consensus 208 ~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~ 287 (502)
.+..|++++.++.|..+|..+++.+......+ .. ........++ .. + + .++.++.
T Consensus 114 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~----------------~~--~~~~~~~~P~----v~-~-g-~v~vg~~ 168 (571)
T 2ad6_A 114 GAGQIVKKQANGHLLALDAKTGKINWEVEVCD----------------PK--VGSTLTQAPF----VA-K-D-TVLMGCS 168 (571)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC----------------GG--GTCBCCSCCE----EE-T-T-EEEEECB
T ss_pred ECCEEEEEeCCCEEEEEECCCCCEEEEecCCC----------------CC--ccceeccCCE----EE-C-C-EEEEEec
Confidence 36678888889999999998765443211100 00 0000011111 11 2 3 5555654
Q ss_pred ------CCcEEEEECCCCeeeEEeccCCCC-------------------------------------e-EEEEEcCCCCc
Q 010769 288 ------DKQVKIWDVAAGKCNLTLEHHTDK-------------------------------------V-QAVAWNHHSPQ 323 (502)
Q Consensus 288 ------Dg~v~vwd~~~~~~~~~~~~h~~~-------------------------------------v-~~l~~~~~~~~ 323 (502)
++.|..+|..+|+.+.++...... + ..+++.+.. .
T Consensus 169 ~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g 247 (571)
T 2ad6_A 169 GAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-N 247 (571)
T ss_dssp CGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-T
T ss_pred CCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-C
Confidence 799999999999988776432110 0 124555655 4
Q ss_pred EEEEEECC----------------CcEEEEeCCCCCCccceEeec---------CCeEEEEeCCCCC--CEEEEEeCCCe
Q 010769 324 ILLSGSFD----------------RSVVMKDARISTHSGFKWAVA---------ADVESLAWDPHAE--HSFVVSLEDGT 376 (502)
Q Consensus 324 ~l~s~~~d----------------g~i~vwd~~~~~~~~~~~~~~---------~~v~~v~~~p~~~--~~l~~~~~dg~ 376 (502)
.++.++.+ +.|..+|.++++..-...... ....-+...+++. .+++.++.+|.
T Consensus 248 ~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~~~G~ 327 (571)
T 2ad6_A 248 LFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHIDRNGI 327 (571)
T ss_dssp EEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEECTTSE
T ss_pred eEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeCCCcE
Confidence 55555432 358899998877542211110 0111112112332 35777889999
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEecCC-------------CCe--------------------------eEEEEcCCCC
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLHAHD-------------KAV--------------------------CTISYNPLVP 417 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~~h~-------------~~v--------------------------~~l~~sp~~~ 417 (502)
++++|..++ +.++...... .++ ..++++|..
T Consensus 328 l~~lD~~tG---------~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~- 397 (571)
T 2ad6_A 328 LYTLNRENG---------NLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES- 397 (571)
T ss_dssp EEEEETTTC---------CEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT-
T ss_pred EEEEECCCC---------CEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC-
Confidence 999999887 3333332111 111 246778776
Q ss_pred CEEEEEe-------------------------------------CCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCC
Q 010769 418 NLLATGS-------------------------------------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSED 460 (502)
Q Consensus 418 ~~l~t~s-------------------------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd 460 (502)
.+|++.+ .+|.|..||+.+++..-..... ..+.+..+...
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~---~~~~~~~~~t~ 474 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK---FAAWGGTLYTK 474 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES---SCCCSBCEEET
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC---CCccceeEEEC
Confidence 4555443 3578999999998843222222 12222222223
Q ss_pred CCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 461 SPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 461 ~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+. ++.+++.+|.|+.||..+++.+.+..
T Consensus 475 gg-~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 475 GG-LVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp TT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred CC-EEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 44 46668899999999999999886543
No 264
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.38 E-value=0.00024 Score=75.56 Aligned_cols=254 Identities=7% Similarity=-0.016 Sum_probs=132.9
Q ss_pred cccccccc-CCCceEEEEEecCCcceeEEEEEecCCC-CCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCC
Q 010769 141 DLEDMTIN-PNDAVIVCARNEDDVSHLEVYILEESDG-GDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSME 218 (502)
Q Consensus 141 ~v~~~~~~-p~~~~l~~~~~~~~~~~l~v~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~d 218 (502)
.+....|+ |+|++||.+..........||+++...+ . .+.. .+.+....+.|+|+|+.|+....+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~--~l~~-----------~~~~~~~~~~WspDg~~l~y~~~d 241 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQ--TIAD-----------KVSGTNGEIVWGPDHTSLFYVTKD 241 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTC--CCCC-----------CEEEECSCCEECSSTTEEEEEEEC
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCE--eCCc-----------cccCceeeEEEecCCCEEEEEEEC
Confidence 56778999 9999999887643222346777776543 2 1100 111112233348999888877665
Q ss_pred -----CcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEec--CCcE
Q 010769 219 -----PAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASA--DKQV 291 (502)
Q Consensus 219 -----g~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~--Dg~v 291 (502)
..|.++++.+...... .... ..+......+.|+|+++.++++... ...|
T Consensus 242 ~~~~~~~v~~~~lgt~~~~~~-----------------------lv~~-~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l 297 (751)
T 2xe4_A 242 ETLRENKVWRHVMGKLQSEDV-----------------------CLYE-EHNPLFSAFMYKAADTNTLCIGSQSPETAEV 297 (751)
T ss_dssp TTCCEEEEEEEETTSCGGGCE-----------------------EEEE-CCCTTCEEEEEECTTSSEEEEEEECSSCEEE
T ss_pred CCCCCCEEEEEECCCCchhcE-----------------------EEEe-cCCCceEEEEEECCCCCEEEEEecCCCCceE
Confidence 2566777654221100 0000 0122345678999996644444432 3468
Q ss_pred EEEECCCC--ee-eEEe-ccCCCCeEEEEEcCCCCcEEEEEECC----CcEEEEeCCCCCCccc-eEeecC--CeEEEEe
Q 010769 292 KIWDVAAG--KC-NLTL-EHHTDKVQAVAWNHHSPQILLSGSFD----RSVVMKDARISTHSGF-KWAVAA--DVESLAW 360 (502)
Q Consensus 292 ~vwd~~~~--~~-~~~~-~~h~~~v~~l~~~~~~~~~l~s~~~d----g~i~vwd~~~~~~~~~-~~~~~~--~v~~v~~ 360 (502)
.++|+.++ .. +..+ ........++.|+..+ .+++.+..+ ..|..+++.++..... ...+.. .+..+.+
T Consensus 298 ~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~-~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~ 376 (751)
T 2xe4_A 298 HLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTS-HLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV 376 (751)
T ss_dssp EEEESSSCTTCCCEEESSCCCTTCCEEEEEETTT-EEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE
T ss_pred EEEECCCCCCCceeEEeecCCCCceEEEeeeeCC-EEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE
Confidence 88898875 23 1333 3344566677765544 566665554 3566677654322222 233333 3455555
Q ss_pred CCCCCCEEEEEeCCCe--EEEEECC------CCCCCCCCCCCCccEEEecCC-CCeeEEEE----cCCCCCEEEEEeCC-
Q 010769 361 DPHAEHSFVVSLEDGT--IKGFDIR------TAKSDPDSTSQQSSFTLHAHD-KAVCTISY----NPLVPNLLATGSTD- 426 (502)
Q Consensus 361 ~p~~~~~l~~~~~dg~--i~i~d~~------~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~----sp~~~~~l~t~s~d- 426 (502)
. +..++++...+|. |.++++. .. ......+.... ..+..+.+ ++++..++++.+..
T Consensus 377 ~--~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~--------g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~ 446 (751)
T 2xe4_A 377 R--SNYLVVAGRRAGLTRIWTMMADSQDGVFKA--------GTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLA 446 (751)
T ss_dssp C--SSEEEEEEEETTEEEEEEEECCTTTSCCCT--------TTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETT
T ss_pred E--CCEEEEEEEeCCEEEEEEEecccccccccC--------CccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCC
Confidence 4 4557777778886 4555641 11 11022222111 12333332 34554566665543
Q ss_pred --CcEEEEECCCCCeeEE
Q 010769 427 --KMVKLWDLSNNQPSCI 442 (502)
Q Consensus 427 --g~i~vwd~~~~~~~~~ 442 (502)
..+..+|+.+++...+
T Consensus 447 ~P~~~~~~d~~~~~~~~l 464 (751)
T 2xe4_A 447 TPNTWFDVSPQDHSRTAV 464 (751)
T ss_dssp EEEEEEEECTTTCCEEEE
T ss_pred CCCEEEEEECCCCcEEEE
Confidence 3577788877664333
No 265
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.34 E-value=9.2e-05 Score=76.10 Aligned_cols=59 Identities=12% Similarity=0.059 Sum_probs=37.3
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.|.|..||+.+++. +...... .++.+-.....+. ++..++.||.|+.||..+++.+-+.
T Consensus 452 ~G~l~A~D~~tG~~--~W~~~~~-~~~~~g~~~tagg-~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 452 LGQIKAYNAITGDY--KWEKMER-FAVWGGTMATAGD-LVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CEEEEEECTTTCCE--EEEEEES-SCCCSBCEEETTT-EEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCCE--EeEecCC-CCccCcceEecCC-EEEEECCCCeEEEEECCCCCEEEEe
Confidence 47788999998874 3332211 1111111122344 5666899999999999999988654
No 266
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.33 E-value=6.9e-05 Score=78.54 Aligned_cols=161 Identities=10% Similarity=0.130 Sum_probs=102.9
Q ss_pred cceeeEEecCCCCcEEEEEecCC-------------------cEEEEECCCCeeeEEecc--CC-------CCeEEEEEc
Q 010769 267 DSVLGLAWNKEFRNILASASADK-------------------QVKIWDVAAGKCNLTLEH--HT-------DKVQAVAWN 318 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg-------------------~v~vwd~~~~~~~~~~~~--h~-------~~v~~l~~~ 318 (502)
.....+++.|. ..+++.++.++ .|..+|+.+|+.+..++. |. .+.....+.
T Consensus 230 ~~w~~~a~d~~-~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~ 308 (668)
T 1kv9_A 230 TVWDSMAYDPE-LDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELN 308 (668)
T ss_dssp CCCSCEEEETT-TTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEE
T ss_pred ccccceEEcCC-CCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEec
Confidence 33456788887 45777887665 499999999999888753 22 223222333
Q ss_pred CCCC--cEEEEEECCCcEEEEeCCCCCCccceE--------eec----CC------------------------eEEEEe
Q 010769 319 HHSP--QILLSGSFDRSVVMKDARISTHSGFKW--------AVA----AD------------------------VESLAW 360 (502)
Q Consensus 319 ~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~--------~~~----~~------------------------v~~v~~ 360 (502)
.++. ..++.++.+|.++++|..+++.+.... ... .+ -..+++
T Consensus 309 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~ 388 (668)
T 1kv9_A 309 IDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSF 388 (668)
T ss_dssp ETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEE
T ss_pred cCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceE
Confidence 3441 268889999999999999887542110 000 00 012566
Q ss_pred CCCCCCEEEEEe------------------------------------CCCeEEEEECCCCCCCCCCCCCCccEEEecCC
Q 010769 361 DPHAEHSFVVSL------------------------------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHD 404 (502)
Q Consensus 361 ~p~~~~~l~~~~------------------------------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~ 404 (502)
+|... ++++.. .+|.|..||+.++ +.+++...+.
T Consensus 389 dp~~g-~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG---------~~~W~~~~~~ 458 (668)
T 1kv9_A 389 NPGTG-LVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQ---------KAAWKVPYPT 458 (668)
T ss_dssp ETTTT-EEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTT---------EEEEEEEESS
T ss_pred CCCCC-EEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCC---------cEEEEccCCC
Confidence 66544 344311 2378999999887 6677766443
Q ss_pred CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 405 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 405 ~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
+.....+...+ .++++++.|+.|++||..+++..
T Consensus 459 -~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~~l 492 (668)
T 1kv9_A 459 -HWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGEAL 492 (668)
T ss_dssp -SCCCCEEEETT-TEEEEECTTSEEEEEETTTCCEE
T ss_pred -CCcCceeEeCC-CEEEEECCcccchhhhhhcChhh
Confidence 23333334444 78888999999999999999843
No 267
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=98.31 E-value=0.00032 Score=66.20 Aligned_cols=181 Identities=11% Similarity=0.009 Sum_probs=118.1
Q ss_pred CcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC---CCccceEe-ecCCeEEEEeCCCC
Q 010769 289 KQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS---THSGFKWA-VAADVESLAWDPHA 364 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~---~~~~~~~~-~~~~v~~v~~~p~~ 364 (502)
..|+..++.+.+....+. ....+..++|++.+..++++-...+.|..+++... ........ .......+++++.+
T Consensus 10 ~~I~~i~~~~~~~~~~~~-~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~ 88 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIH 88 (316)
T ss_dssp SSEEEEETTSCCCEEEEC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTT
T ss_pred CeEEEEECCCcceEehhc-CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecC
Confidence 569999998876655554 34568899999877466666667789999998762 11111121 12346788888766
Q ss_pred CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC-CcEEEEECCCCCeeEEE
Q 010769 365 EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD-KMVKLWDLSNNQPSCIA 443 (502)
Q Consensus 365 ~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d-g~i~vwd~~~~~~~~~~ 443 (502)
.+++++-...+.|.++++... .....+.........+++.|.++.++++.... +.|..+++.......+
T Consensus 89 ~~ly~~d~~~~~I~~~~~~g~---------~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~~~~- 158 (316)
T 1ijq_A 89 SNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL- 158 (316)
T ss_dssp TEEEEEETTTTEEEEEETTSS---------SEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEEEE-
T ss_pred CeEEEEECCCCEEEEEeCCCC---------ceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCeEEE-
Confidence 656666677889999998643 22222222335678999999764555554433 6888888865442222
Q ss_pred EecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 444 SRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 444 ~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
..........++++|++..++.+-...+.|..+++..
T Consensus 159 -~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 159 -VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp -ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred -EECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 1223456889999998776677666778999999864
No 268
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.26 E-value=1.8e-05 Score=71.35 Aligned_cols=169 Identities=8% Similarity=0.012 Sum_probs=111.6
Q ss_pred eeeEEeccCCC--CeEEEEEcCCCCcEEEEEECCC--cEEEEeCCCCCCccceEeecCCeE--EEEeCCCCCCEEEEEeC
Q 010769 300 KCNLTLEHHTD--KVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVAADVE--SLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 300 ~~~~~~~~h~~--~v~~l~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v~--~v~~~p~~~~~l~~~~~ 373 (502)
+.+.++. |.. ..+.|.|+ ++ .++.+.+.+| .|+++|+.+++.... ........ .++.. +..++++...
T Consensus 32 ~vv~~~p-hd~~~ftqGL~~~-~~-~LyestG~~g~S~v~~vD~~Tgkv~~~-~~l~~~~FgeGit~~--g~~ly~ltw~ 105 (262)
T 3nol_A 32 QIVHSYP-HDTKAFTEGFFYR-NG-YFYESTGLNGRSSIRKVDIESGKTLQQ-IELGKRYFGEGISDW--KDKIVGLTWK 105 (262)
T ss_dssp EEEEEEE-CCTTCEEEEEEEE-TT-EEEEEEEETTEEEEEEECTTTCCEEEE-EECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred EEEEEec-CCCCcccceEEEE-CC-EEEEECCCCCCceEEEEECCCCcEEEE-EecCCccceeEEEEe--CCEEEEEEee
Confidence 3456664 443 34889998 55 7777887766 899999999887653 33344433 34443 4556666667
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC---CC
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK---AG 450 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~---~~ 450 (502)
++.+.+||..+. +.+.++.... .-..++ +++ ..|+.+..++.|.++|..+.+.......... ..
T Consensus 106 ~~~v~v~D~~t~---------~~~~ti~~~~-eG~glt--~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 106 NGLGFVWNIRNL---------RQVRSFNYDG-EGWGLT--HND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp SSEEEEEETTTC---------CEEEEEECSS-CCCCEE--ECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred CCEEEEEECccC---------cEEEEEECCC-CceEEe--cCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 999999999987 6666666432 223444 455 4444444578899999998875333333211 13
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.++.+.|. +|. +++..-.+..|.+.|..+++.+..+-
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id 209 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIID 209 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEE
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEE
Confidence 45667786 665 67766678899999999999876654
No 269
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.26 E-value=3e-05 Score=69.83 Aligned_cols=168 Identities=8% Similarity=0.009 Sum_probs=115.5
Q ss_pred eeeEEeccCC--CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEeecCCeE--EEEeCCCCCCEEEEEeCCC
Q 010769 300 KCNLTLEHHT--DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAVAADVE--SLAWDPHAEHSFVVSLEDG 375 (502)
Q Consensus 300 ~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~--~v~~~p~~~~~l~~~~~dg 375 (502)
+.+.++. |. ...+.|.|+. + .++++.+.+|.|+++|+.+++..... ...... .+++. +..++++...++
T Consensus 44 ~Vv~~~p-hd~~~ftqGL~~~~-~-~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~--g~~Ly~ltw~~~ 116 (268)
T 3nok_A 44 HIIREYP-HATNAFTQGLVFHQ-G-HFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASD--GERLYQLTWTEG 116 (268)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T-EEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEEC--SSCEEEEESSSC
T ss_pred EEEEEEc-CCCccccceEEEEC-C-EEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEe--CCEEEEEEccCC
Confidence 4455563 44 3457889874 3 78888889999999999999887654 444443 35554 455777777899
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC---CCCE
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK---AGAV 452 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~---~~~v 452 (502)
.+.+||..+. +.+.++... ..-..++ +++ ..|+.+..++.|.++|..+.+.........+ ...+
T Consensus 117 ~v~V~D~~Tl---------~~~~ti~~~-~eGwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~l 183 (268)
T 3nok_A 117 LLFTWSGMPP---------QRERTTRYS-GEGWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELI 183 (268)
T ss_dssp EEEEEETTTT---------EEEEEEECS-SCCCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred EEEEEECCcC---------cEEEEEeCC-CceeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccc
Confidence 9999999987 666666643 2234555 445 5555555688999999999875433333222 2345
Q ss_pred EEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 453 FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 453 ~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+.+.|. +|. +++..-....|.+.|..+++.+..+-
T Consensus 184 NeLe~~-dG~-lyanvw~s~~I~vIDp~TG~V~~~Id 218 (268)
T 3nok_A 184 NELECA-NGV-IYANIWHSSDVLEIDPATGTVVGVID 218 (268)
T ss_dssp EEEEEE-TTE-EEEEETTCSEEEEECTTTCBEEEEEE
T ss_pred cccEEe-CCE-EEEEECCCCeEEEEeCCCCcEEEEEE
Confidence 677887 665 67666567899999999999876543
No 270
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.26 E-value=0.00075 Score=72.23 Aligned_cols=198 Identities=9% Similarity=0.044 Sum_probs=123.6
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEe---ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTL---EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~---~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
...|.++...+++ .|..|+.++-|.+|+..+++..... ......|.++...+++ . |..|+.++.|..++.++.
T Consensus 362 ~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~-lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 362 NKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-N-LWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp SSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-C-EEEEETTEEEEEECSSSC
T ss_pred CcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-C-EEEEeccCCEEEEcCCCC
Confidence 3568999888773 3556776677999998765432211 1234678999888777 4 555777777899988765
Q ss_pred CCccceE--eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec-----CCCCeeEEEEcCC
Q 010769 343 THSGFKW--AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA-----HDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~~~--~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~ 415 (502)
+...... .....|.++...+++ .+.+|+. +-|..|+..+.. ....... ....|.++...++
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g--~lwigt~-~Gl~~~~~~~~~---------~~~~~~~~~~~~~~~~i~~i~~d~~ 505 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNK--KIWIGTH-AGVFVIDLASKK---------VIHHYDTSNSQLLENFVRSIAQDSE 505 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTS--EEEEEET-TEEEEEESSSSS---------CCEEECTTTSSCSCSCEEEEEECTT
T ss_pred cEEEeccCCCCCCeEEEEEECCCC--CEEEEEC-CceEEEeCCCCe---------EEecccCcccccccceeEEEEEcCC
Confidence 4322111 123568888888755 4666776 568889987652 1111111 1357889988887
Q ss_pred CCCEEEEEeCCCcEEEEECCCCCeeEEEEec-CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 416 VPNLLATGSTDKMVKLWDLSNNQPSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
+ . |..|+..+-|..|+..+.+........ .....|.++...++|. +. .|+..|.|..||..+++
T Consensus 506 g-~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lW-i~T~~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 506 G-R-FWIGTFGGGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQ-MW-LATGEGLVCFPSARNFD 570 (781)
T ss_dssp C-C-EEEEESSSCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSC-EE-EEETTEEEEESCTTTCC
T ss_pred C-C-EEEEEcCCCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCC-EE-EEECCCceEEECCCCCc
Confidence 6 4 444555444888988776522211111 1235689999999997 33 34556654888887654
No 271
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.26 E-value=2.1e-05 Score=82.49 Aligned_cols=203 Identities=11% Similarity=0.170 Sum_probs=109.1
Q ss_pred ceeeEEecCCCCcEEEEEe-cCCcEEEEECCCCeeeEEeccCCC-CeEEEEEcCCCCcEEEEEE-CC-----CcEEEEeC
Q 010769 268 SVLGLAWNKEFRNILASAS-ADKQVKIWDVAAGKCNLTLEHHTD-KVQAVAWNHHSPQILLSGS-FD-----RSVVMKDA 339 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs-~Dg~v~vwd~~~~~~~~~~~~h~~-~v~~l~~~~~~~~~l~s~~-~d-----g~i~vwd~ 339 (502)
...++++..+ +.+++.|+ .+..+.+||+.+++....-..+.. .-.+++..+++ ++++.|+ .+ ..+.+||.
T Consensus 244 ~~~~~~~~~~-g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~ 321 (656)
T 1k3i_A 244 FCPGISMDGN-GQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSP 321 (656)
T ss_dssp SSCEEEECTT-SCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEET
T ss_pred ccccccCCCC-CCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCC-eEEEEeCcccCCcccccceEeCC
Confidence 3445667777 45788887 456899999987754432221221 22345566677 7888888 44 56899998
Q ss_pred CCCCCccce----EeecCCeEEEEeCCCCCCEEEEEeCCC---------eEEEEECCCCCCCCCCCCCCccEEEecC---
Q 010769 340 RISTHSGFK----WAVAADVESLAWDPHAEHSFVVSLEDG---------TIKGFDIRTAKSDPDSTSQQSSFTLHAH--- 403 (502)
Q Consensus 340 ~~~~~~~~~----~~~~~~v~~v~~~p~~~~~l~~~~~dg---------~i~i~d~~~~~~~~~~~~~~~~~~~~~h--- 403 (502)
.+..-.... ......-....+..+ ..+++.|+.+| .+..||..+. ........+
T Consensus 322 ~t~~W~~~~~~~~~p~~~~~~~~~~~~~-~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~---------~w~~~~~~~~~~ 391 (656)
T 1k3i_A 322 SSKTWTSLPNAKVNPMLTADKQGLYRSD-NHAWLFGWKKGSVFQAGPSTAMNWYYTSGS---------GDVKSAGKRQSN 391 (656)
T ss_dssp TTTEEEEETTSCSGGGCCCCTTGGGTTT-CSCCEEECGGGCEEECCSSSEEEEEECSTT---------CEEEEEEECEET
T ss_pred CCCcceeCCCccccccccccccceeecC-CceEEEECCCCcEEEecCccceeeeecCCc---------ceeecCCccccc
Confidence 764311100 000000000112222 23455555444 4677887764 111111111
Q ss_pred ------CCCeeEEEEcCCCCCEEEEEeCCC-----------cEEEEECCCCCeeEEEEecCCCCC-EEEEEEcCCCCcEE
Q 010769 404 ------DKAVCTISYNPLVPNLLATGSTDK-----------MVKLWDLSNNQPSCIASRNPKAGA-VFSVAFSEDSPFVL 465 (502)
Q Consensus 404 ------~~~v~~l~~sp~~~~~l~t~s~dg-----------~i~vwd~~~~~~~~~~~~~~~~~~-v~~~~~spd~~~ll 465 (502)
...-.++.|...+.++++.|+.++ .|.+||..+.....+..-..+... -.++...|++. ++
T Consensus 392 ~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~-i~ 470 (656)
T 1k3i_A 392 RGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS-TF 470 (656)
T ss_dssp TEECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC-EE
T ss_pred cccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC-EE
Confidence 112244444443447888887542 578888887764333200112222 23456778888 68
Q ss_pred EEEeCC-----------CcEEEEECCCCc
Q 010769 466 AIGGSK-----------GKLEIWDTLSDA 483 (502)
Q Consensus 466 asg~~d-----------g~i~vwd~~~~~ 483 (502)
+.||.+ ..+.+||..+++
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~ 499 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDT 499 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEEEGGGTE
T ss_pred EECCcccCcCcCCCCcccceEEEcCCCCc
Confidence 888754 468999987654
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.24 E-value=0.00048 Score=70.73 Aligned_cols=60 Identities=8% Similarity=0.088 Sum_probs=38.4
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
+|.|..||+.+++..-...... ++..-.....+. +++.|+.||.|+.||..+++.+-+.-
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg-lvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL---PLWAGVLATAGN-LVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS---CCCSCCEEETTT-EEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC---CCcccceEeCCC-EEEEECCCCcEEEEECCCCCEEEEec
Confidence 5789999999988432222211 111111112244 57779999999999999999886543
No 273
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.24 E-value=0.00032 Score=65.81 Aligned_cols=226 Identities=8% Similarity=0.059 Sum_probs=124.4
Q ss_pred ccccccccCCCceEEEEEecCCcceeEEEEEecCCCCCCceeeeeccccCCCcceeeeecCCCCCCCCCCEEEEecCCC-
Q 010769 141 DLEDMTINPNDAVIVCARNEDDVSHLEVYILEESDGGDPNLYVHHHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSMEP- 219 (502)
Q Consensus 141 ~v~~~~~~p~~~~l~~~~~~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~dg- 219 (502)
..+.+++.|+++++++....+ +|+.++.... +... ...+..|.++.+ .++|+++++.....
T Consensus 33 ~pegia~~~~g~lyv~d~~~~-----~I~~~d~~g~----~~~~--~~~~~~p~gia~-------~~dG~l~vad~~~~~ 94 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVG-----EIVSITPDGN----QQIH--ATVEGKVSGLAF-------TSNGDLVATGWNADS 94 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTT-----EEEEECTTCC----EEEE--EECSSEEEEEEE-------CTTSCEEEEEECTTS
T ss_pred CcceEEECCCCCEEEEeCCCC-----eEEEECCCCc----eEEE--EeCCCCceeEEE-------cCCCcEEEEeccCCc
Confidence 456789999998777765554 7888875542 1111 123345566655 67888766654332
Q ss_pred -cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCCcEEEEECCC
Q 010769 220 -AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADKQVKIWDVAA 298 (502)
Q Consensus 220 -~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~ 298 (502)
.|..++...+.. .... .. ........++..+. ...+++-+..+.|.++|..+
T Consensus 95 ~~v~~~d~~~g~~-~~~~------------------------~~-~~~~~~~g~~~~~~-~~~~v~d~~~g~i~~~d~~~ 147 (306)
T 2p4o_A 95 IPVVSLVKSDGTV-ETLL------------------------TL-PDAIFLNGITPLSD-TQYLTADSYRGAIWLIDVVQ 147 (306)
T ss_dssp CEEEEEECTTSCE-EEEE------------------------EC-TTCSCEEEEEESSS-SEEEEEETTTTEEEEEETTT
T ss_pred ceEEEEcCCCCeE-EEEE------------------------eC-CCccccCcccccCC-CcEEEEECCCCeEEEEeCCC
Confidence 355555443221 1000 00 01112233444444 44555555688999999876
Q ss_pred Cee-eEEec---------cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCC-CCCc-cceEeecCCeEEEEeCCCCCC
Q 010769 299 GKC-NLTLE---------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARI-STHS-GFKWAVAADVESLAWDPHAEH 366 (502)
Q Consensus 299 ~~~-~~~~~---------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~-~~~~-~~~~~~~~~v~~v~~~p~~~~ 366 (502)
++. +.... ..-.....| ++++..++++-...+.|..|++.. +... ...+........+++++++.
T Consensus 148 ~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~- 224 (306)
T 2p4o_A 148 PSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGN- 224 (306)
T ss_dssp TEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCC-
T ss_pred CcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCC-
Confidence 532 21110 111234555 677745666666788999999875 2211 11122223466788898874
Q ss_pred EEEEEeCCCeEEEEECCCCCCCCCCCCCCc--cEEEecCCCCeeEEEEc---CCCCCEEEEEe
Q 010769 367 SFVVSLEDGTIKGFDIRTAKSDPDSTSQQS--SFTLHAHDKAVCTISYN---PLVPNLLATGS 424 (502)
Q Consensus 367 ~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~~~~~h~~~v~~l~~s---p~~~~~l~t~s 424 (502)
++++....+.|.+++.. + .. +..+...-...++++|. |++..++++.+
T Consensus 225 l~va~~~~~~V~~~~~~-G---------~~~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 225 LYGATHIYNSVVRIAPD-R---------STTIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEECBTTCCEEEECTT-C---------CEEEEECGGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred EEEEeCCCCeEEEECCC-C---------CEEEEeecccccCCceEEEEecccCCCCEEEEECC
Confidence 66666667889999865 2 22 11223333568899998 77634444443
No 274
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.21 E-value=0.0037 Score=66.85 Aligned_cols=204 Identities=11% Similarity=0.060 Sum_probs=123.9
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEec-------cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-------HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~-------~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 339 (502)
..|.++...++ + .|..|+..+-|..|+..+++...... .....|.++...+++ . |..|+.. -|.+||.
T Consensus 163 ~~i~~i~~d~~-g-~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lwigt~~-Gl~~~d~ 237 (781)
T 3v9f_A 163 EQTWTATEAED-G-KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDVRCIYKDTNG-N-IWIGTSK-GLALFNA 237 (781)
T ss_dssp CCEEEEEEEET-T-EEEEEETTTEEEEEETTTTEEEEECC--------CCSSEEEEEECTTC-C-EEEEETT-EEEEEET
T ss_pred cceEEEEECCC-C-CEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCceeEEEEcCCC-C-EEEEeCC-cHheECC
Confidence 45888887766 3 45556766569999988775432211 113568899888877 4 4445555 6888998
Q ss_pred CCCCCccceE-------eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEE-------EecCCC
Q 010769 340 RISTHSGFKW-------AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT-------LHAHDK 405 (502)
Q Consensus 340 ~~~~~~~~~~-------~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-------~~~h~~ 405 (502)
.+........ .....|.++...+++ .+.+|+..+-|.+++..+....... ...... ......
T Consensus 238 ~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~~~~--~~~f~~~~~~~~~~~l~~~ 313 (781)
T 3v9f_A 238 NTETFTNFHNNPGNIHGALSSYIFSIKQLKDN--KLWIATELNGIMILDLQQNQFLLPE--QIRFEFIREGDNNYSLSNA 313 (781)
T ss_dssp TTTEEEC-----------CCCCEEEEEECTTS--EEEEEESSSCEEEEETTCC-----------CEEECBCSSTTSBSSS
T ss_pred CCCcEEEEEcCCCccccccCceEEEEEECCCC--CEEEEeCCCCeEEECCCCCeeeeee--ccccccccCCCCCCCCCCC
Confidence 7654332111 123568888888755 5777887667888998765210000 000000 012345
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEE-------ecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIAS-------RNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~-------~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd 478 (502)
.|.++...+++ .|-.|+.++-|..|+........... .......|.++...+++. |-.|+.++.|..|+
T Consensus 314 ~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~--lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 314 SARYIFQDSFN--NIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGK--LWIGTDGGGINVFE 389 (781)
T ss_dssp CEEEEEECSSC--CEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSC--EEEEEBSSCEEEEE
T ss_pred eEEEEEEeCCC--CEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCC--EEEEeCCCcEEEEE
Confidence 78899888876 35566666779999987665322211 011235699999999887 44566566789999
Q ss_pred CCCCc
Q 010769 479 TLSDA 483 (502)
Q Consensus 479 ~~~~~ 483 (502)
..++.
T Consensus 390 ~~~~~ 394 (781)
T 3v9f_A 390 NGKRV 394 (781)
T ss_dssp TTEEE
T ss_pred CCCCe
Confidence 86543
No 275
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.17 E-value=0.00031 Score=69.39 Aligned_cols=205 Identities=7% Similarity=0.097 Sum_probs=114.0
Q ss_pred ccceeeEEecCCCCcEEEEEecCC----cEEEEECCCCeee--EEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeC
Q 010769 266 TDSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCN--LTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDA 339 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg----~v~vwd~~~~~~~--~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~ 339 (502)
......|+|++++..++++....+ .+.+.+. .+... ..+. .......++++|.+..++++-...+.|..++.
T Consensus 178 ~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~-~g~~~~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~ 255 (430)
T 3tc9_A 178 LSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR-ESGFKVITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDF 255 (430)
T ss_dssp CSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG-GGTSCSEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEET
T ss_pred CCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC-CCceeeeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEEC
Confidence 355789999999543444444222 2333442 33221 2222 12345678899944377777777889999998
Q ss_pred CCCCCccceEee--cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC--------------
Q 010769 340 RISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------------- 403 (502)
Q Consensus 340 ~~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h-------------- 403 (502)
....... .... ......++|+|++..++++-...+.|..++....... ......+.+.
T Consensus 256 ~~~~~~~-~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~~~~-----~~~~~~~ag~~g~~g~~dg~~~~a 329 (430)
T 3tc9_A 256 TTQETTP-LFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWKTKR-----LTTPYIVCGQQGAKDWVDGVGKKA 329 (430)
T ss_dssp TTTEEEE-EEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTE-----ECCCEEEEECTTCBCCBCEEGGGC
T ss_pred CCCcEEE-EEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCCccccc-----ccceEEEeccCCCCCCCCCCCcce
Confidence 7654321 1222 2347889999998756666677889999886532000 0001111111
Q ss_pred -CCCee-EEEEc--------CCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-----cC----------CCCCEEEEEEc
Q 010769 404 -DKAVC-TISYN--------PLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-----NP----------KAGAVFSVAFS 458 (502)
Q Consensus 404 -~~~v~-~l~~s--------p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-----~~----------~~~~v~~~~~s 458 (502)
-.... .++.. +.+ .++++-...+.|+.++. .+....+... .+ .-.....++++
T Consensus 330 ~~~~P~~gv~v~~~~y~~~D~~g-~lyvaD~~n~~I~~i~~-~G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd 407 (430)
T 3tc9_A 330 RMHAPRQGTFVKNPAYKGSSDEY-DFYFCDRENHCIRILTP-QGRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYD 407 (430)
T ss_dssp BBSSEEEEEEEECGGGTTSSCCE-EEEEEEGGGTEEEEECT-TSEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEE
T ss_pred EeCCCcceEEEccccccccCCCC-eEEEEECCCcEEEEECC-CCcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEE
Confidence 01122 44443 223 45555555677888883 4443222221 00 01257889999
Q ss_pred CCCCcEEEEEeCCCcEEEEECC
Q 010769 459 EDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 459 pd~~~llasg~~dg~i~vwd~~ 480 (502)
|++..|+++-..+.+|+.+++.
T Consensus 408 ~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 408 EERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp TTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCCEEEEEECCCCeEEEEccC
Confidence 9544467766667788887753
No 276
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.16 E-value=0.0025 Score=66.01 Aligned_cols=207 Identities=11% Similarity=0.060 Sum_probs=137.1
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..+..|+|.+..+.++.+-...+.|..+++........+.........|++.+.+.+++++-...+.|.+.++.......
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~ 116 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQV 116 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEE
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEE
Confidence 45789999998666666667788999999876544333433334577888887765677777778899999987544322
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEE-eCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~-~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
.....-.....++++|....++++- +..+.|...++... ....+...-.....|++.+.+.++.++-..
T Consensus 117 l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~----------~~~~l~~~~~~P~GlalD~~~~~LY~aD~~ 186 (628)
T 4a0p_A 117 LVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS----------ERTTLVPNVGRANGLTIDYAKRRLYWTDLD 186 (628)
T ss_dssp EECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC----------SCEEEECSCSSEEEEEEETTTTEEEEEETT
T ss_pred EEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC----------ceEEEECCCCCcceEEEccccCEEEEEECC
Confidence 2212334578999998666444443 23567888877643 222333345567899999977466666667
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.+.|..+++.......+.. .......+++..+ +++.+-...+.|...|..+++....+
T Consensus 187 ~~~I~~~d~dG~~~~v~~~---~l~~P~glav~~~--~ly~tD~~~~~I~~~dk~tg~~~~~l 244 (628)
T 4a0p_A 187 TNLIESSNMLGLNREVIAD---DLPHPFGLTQYQD--YIYWTDWSRRSIERANKTSGQNRTII 244 (628)
T ss_dssp TTEEEEEETTSCSCEEEEE---CCSCEEEEEEETT--EEEEEETTTTEEEEEETTTCCSCEEE
T ss_pred CCEEEEEcCCCCceEEeec---cCCCceEEEEECC--EEEEecCCCCEEEEEECCCCCceEEE
Confidence 7889999997765422222 2334668888653 46777666789999998777654433
No 277
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.12 E-value=8.8e-05 Score=78.96 Aligned_cols=197 Identities=9% Similarity=0.054 Sum_probs=110.2
Q ss_pred ceeeEEec-CCCCcEEEEEecCC----cEEEEECCCC-eeeE-EeccCCCCeEEEEEcCCCCcEEEEEECC-----CcEE
Q 010769 268 SVLGLAWN-KEFRNILASASADK----QVKIWDVAAG-KCNL-TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVV 335 (502)
Q Consensus 268 ~V~~l~~~-~~~~~~l~sgs~Dg----~v~vwd~~~~-~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~ 335 (502)
.+...+|+ |+|..++++.+.+| +|+++|+.++ +.+. .+. .....+.|+|++ +.|+....+ ..|.
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~---~~~~~~~WspDg-~~l~y~~~d~~~~~~~v~ 250 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS---GTNGEIVWGPDH-TSLFYVTKDETLRENKVW 250 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE---EECSCCEECSST-TEEEEEEECTTCCEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc---CceeeEEEecCC-CEEEEEEECCCCCCCEEE
Confidence 67889999 99654444544444 4999999998 6321 111 123468899999 444444443 2577
Q ss_pred EEeCCCCCCcc-ceEe--ecCCeEEEEeCCCCCCEEEEEeC--CCeEEEEECCCCCCCCCCCCCCc-cEEEe-cCCCCee
Q 010769 336 MKDARISTHSG-FKWA--VAADVESLAWDPHAEHSFVVSLE--DGTIKGFDIRTAKSDPDSTSQQS-SFTLH-AHDKAVC 408 (502)
Q Consensus 336 vwd~~~~~~~~-~~~~--~~~~v~~v~~~p~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~-~~~~~-~h~~~v~ 408 (502)
++++.++.... ..+. .......+.|+|++..++++... ...|+++|+.++.. .. +..+. .......
T Consensus 251 ~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~-------~~~~~~l~~~~~~~~~ 323 (751)
T 2xe4_A 251 RHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNA-------HNTLEIVRPREKGVRY 323 (751)
T ss_dssp EEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTT-------CCCEEESSCCCTTCCE
T ss_pred EEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCC-------CceeEEeecCCCCceE
Confidence 88887654321 1221 22346678999998855555533 34688888876410 11 02222 2334555
Q ss_pred EEEEcCCCCCEEEEEeCC----CcEEEEECCC-CCeeE-EEEecCCCCCEEEEEEcCCCCcEEEEEeCCCc--EEEEEC
Q 010769 409 TISYNPLVPNLLATGSTD----KMVKLWDLSN-NQPSC-IASRNPKAGAVFSVAFSEDSPFVLAIGGSKGK--LEIWDT 479 (502)
Q Consensus 409 ~l~~sp~~~~~l~t~s~d----g~i~vwd~~~-~~~~~-~~~~~~~~~~v~~~~~spd~~~llasg~~dg~--i~vwd~ 479 (502)
++.|+. +..+++....+ ..|..+++.+ ..... +.... ....+..+.+. +.+++++...+|. |.++++
T Consensus 324 s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~-~~~~l~~~~~~--~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 324 DVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHS-EDVFMESIAVR--SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp EEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCC-SSEEEEEEEEC--SSEEEEEEEETTEEEEEEEEC
T ss_pred EEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCC-CCcEEEEEEEE--CCEEEEEEEeCCEEEEEEEec
Confidence 565554 43555554443 3567777764 22112 22211 11134555554 5567888888885 555564
No 278
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.11 E-value=0.0014 Score=67.18 Aligned_cols=164 Identities=15% Similarity=0.109 Sum_probs=96.0
Q ss_pred cEEEEECCCCeeeEEecc--C--------CCCeEEEEEcCCCC--cEEEEEECCCcEEEEeCCCCCCccceEeecC----
Q 010769 290 QVKIWDVAAGKCNLTLEH--H--------TDKVQAVAWNHHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVAA---- 353 (502)
Q Consensus 290 ~v~vwd~~~~~~~~~~~~--h--------~~~v~~l~~~~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~---- 353 (502)
.|..+|..+|+.+..++. | ..++. +....+|. .+++.++.+|.+.++|..+++.+... ....
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~-~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLIVAE-KVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEEEEE-ESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEEeee-cccCCccc
Confidence 699999999998887753 2 12222 22223452 35777888999999999887653211 1100
Q ss_pred ----------Ce--------------------------EEEEeCCCCCCEEEEEe-------------------------
Q 010769 354 ----------DV--------------------------ESLAWDPHAEHSFVVSL------------------------- 372 (502)
Q Consensus 354 ----------~v--------------------------~~v~~~p~~~~~l~~~~------------------------- 372 (502)
++ ..++++|... ++++..
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~ 429 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESR-TLYAGLNHICMDWEPFMLPYRAGQFFVGATL 429 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTT-EEEEEEECEEEEEEECCCCCCTTSCCCCEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCC-EEEEEchhccccccccccccccCCccccccc
Confidence 01 2356677655 454442
Q ss_pred ------------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee
Q 010769 373 ------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS 440 (502)
Q Consensus 373 ------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~ 440 (502)
..|.|..||+.++ +.+++..... .+.+..+...+ .+++.++.|+.|+.||.++++.
T Consensus 430 ~~~~~~~~~~~~~~g~l~a~D~~tG---------~~~W~~~~~~-~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~tG~~- 497 (571)
T 2ad6_A 430 AMYPGPNGPTKKEMGQIRAFDLTTG---------KAKWTKWEKF-AAWGGTLYTKG-GLVWYATLDGYLKALDNKDGKE- 497 (571)
T ss_dssp EEEECTTSTTSCCCEEEEEECTTTC---------CEEEEEEESS-CCCSBCEEETT-TEEEEECTTSEEEEEETTTCCE-
T ss_pred eeccCccccCCCCCCeEEEEECCCC---------CEEEEecCCC-CccceeEEECC-CEEEEEcCCCeEEEEECCCCCE-
Confidence 3478999999887 5666665332 22222222234 6777799999999999999984
Q ss_pred EEEEecCCCC-CEEEEEEcCCCCcEEEEEe
Q 010769 441 CIASRNPKAG-AVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 441 ~~~~~~~~~~-~v~~~~~spd~~~llasg~ 469 (502)
+..+..... .-..+.+..++...+++.+
T Consensus 498 -lw~~~~~~~~~~~p~~~~~~G~~yv~~~~ 526 (571)
T 2ad6_A 498 -LWNFKMPSGGIGSPMTYSFKGKQYIGSMY 526 (571)
T ss_dssp -EEEEECSSCCCSCCEEEEETTEEEEEEEE
T ss_pred -EEEEeCCCCcEeeeEEEEECCEEEEEEEC
Confidence 333332211 1112335567764344433
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=98.08 E-value=0.0031 Score=59.36 Aligned_cols=203 Identities=11% Similarity=-0.013 Sum_probs=125.4
Q ss_pred cceeeeecCCCCCCC-CCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 193 PLCMAWLDCPLKDRE-KGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~-~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
+..++| .+ ++.++.+-...+.|..++++........ ....-.....
T Consensus 37 ~~~ld~-------d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~--------------------------~~~~l~~p~g 83 (318)
T 3sov_A 37 AAAVDF-------VFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--------------------------VVSGLLSPDG 83 (318)
T ss_dssp EEEEEE-------EGGGTEEEEEETTTTEEEEEETTSSSCCCEE--------------------------EEECCSCCCE
T ss_pred cEEEEE-------EeCCCEEEEEECCCCcEEEEEccCCCceEEE--------------------------EcCCCCCccE
Confidence 356677 33 4566666666788988888643211100 0011234667
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEE-CCCcEEEEeCCCCCCccceEe
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGS-FDRSVVMKDARISTHSGFKWA 350 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~-~dg~i~vwd~~~~~~~~~~~~ 350 (502)
|++.+.+++++++-...+.|.++++........+.........+++.|.++.++++-. ..+.|..+++...........
T Consensus 84 lavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~ 163 (318)
T 3sov_A 84 LACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRFIIINS 163 (318)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCEEEECS
T ss_pred EEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeEEEEEC
Confidence 8888765667777777789999998754333333344556789999987635444442 357888888764332221111
Q ss_pred ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEE
Q 010769 351 VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVK 430 (502)
Q Consensus 351 ~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~ 430 (502)
.-.....++|+|.+..++++-+..+.|..+++... ..............++++.. ..++.+-...+.|.
T Consensus 164 ~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---------~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~ 232 (318)
T 3sov_A 164 EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---------NRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSIL 232 (318)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEE
T ss_pred CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---------ceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEE
Confidence 22346889999977766666677889999998643 11111222334556777753 36677766778899
Q ss_pred EEECCCCCe
Q 010769 431 LWDLSNNQP 439 (502)
Q Consensus 431 vwd~~~~~~ 439 (502)
.++..+++.
T Consensus 233 ~~~~~~G~~ 241 (318)
T 3sov_A 233 ACNKYTGEG 241 (318)
T ss_dssp EEETTTCCS
T ss_pred EEECCCCCc
Confidence 999876653
No 280
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=98.07 E-value=0.0016 Score=63.52 Aligned_cols=189 Identities=11% Similarity=0.004 Sum_probs=121.8
Q ss_pred EEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC---CccceEe-ecCCeE
Q 010769 281 ILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST---HSGFKWA-VAADVE 356 (502)
Q Consensus 281 ~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~---~~~~~~~-~~~~v~ 356 (502)
+|+.+. ...|+..++........+. ....+..|+|++.+..++++-...+.|+.+++.... ....... ......
T Consensus 85 ~ll~~~-~~~I~~i~l~~~~~~~~~~-~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~ 162 (400)
T 3p5b_L 85 YLFFTN-RHEVRKMTLDRSEYTSLIP-NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPD 162 (400)
T ss_dssp EEEEEE-TTEEEEECTTSCSCEEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEE
T ss_pred eeEEec-cceeEEEccCCcceeEecc-ccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcc
Confidence 444433 4689999988765544443 456788999998774666666677889999886532 1111111 234567
Q ss_pred EEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC-CCcEEEEECC
Q 010769 357 SLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST-DKMVKLWDLS 435 (502)
Q Consensus 357 ~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~-dg~i~vwd~~ 435 (502)
.+++.+.+.+++++-...+.|.+.++... .....+...-.....|++.|.++.++.+-.. .+.|...++.
T Consensus 163 glavD~~~~~lY~~d~~~~~I~~~~~~g~---------~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d 233 (400)
T 3p5b_L 163 GLAVDWIHSNIYWTDSVLGTVSVADTKGV---------KRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 233 (400)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTTC---------SEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT
T ss_pred cEEEEecCCceEEEECCCCeEEEEeCCCC---------ceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC
Confidence 88888766667777777889999988754 2222233334457899999976355555433 4789999987
Q ss_pred CCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 436 NNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
......+ ..........|++++++..|+.+-...+.|..+++...
T Consensus 234 G~~~~~~--~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 234 GVDIYSL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCccEEE--EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 6553222 22334568899999887766666566778999998643
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.07 E-value=0.0011 Score=65.55 Aligned_cols=205 Identities=8% Similarity=0.093 Sum_probs=114.4
Q ss_pred ccceeeEEecCCCCcEEEEEecC---Cc-EEEEECCCCee-eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCC
Q 010769 266 TDSVLGLAWNKEFRNILASASAD---KQ-VKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 340 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~D---g~-v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 340 (502)
.....+|+|++++. ++++.... .. +...+...+.. ...+. .-.....++++|.+..++++-..++.|+.++..
T Consensus 181 ~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~ 258 (433)
T 4hw6_A 181 IGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRASGFTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPA 258 (433)
T ss_dssp CSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGGGTTCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTT
T ss_pred CCCccEEEECCCCC-EEEEcCCCCcccceEEEEECCCCeecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECC
Confidence 34588999999955 55554321 11 33333221111 01111 223456788999443766666678889999987
Q ss_pred CCCCccceEee--cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecC---------------
Q 010769 341 ISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAH--------------- 403 (502)
Q Consensus 341 ~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h--------------- 403 (502)
++......... ......++|+|++..++++-...+.|+.++....... ......+.+.
T Consensus 259 ~g~~~~~~~~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~~~-----~~~~~~~ag~~g~~g~~dg~~~~a~ 333 (433)
T 4hw6_A 259 TGTLTEEEVMMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRETGK-----LAVPYIVCGQHSSPGWVDGMGTGAR 333 (433)
T ss_dssp TCCEEEEEEECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTTCC-----BCCCEEEEECTTCCCCBCEEGGGSB
T ss_pred CCeEEEEEeccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCCcc-----cCcEEEEEecCCCCccCCCcccceE
Confidence 65541212221 1223469999988756666677889999886532100 0011111111
Q ss_pred CCCeeEEEE---------cCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecC---------------CCCCEEEEEEc-
Q 010769 404 DKAVCTISY---------NPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNP---------------KAGAVFSVAFS- 458 (502)
Q Consensus 404 ~~~v~~l~~---------sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~---------------~~~~v~~~~~s- 458 (502)
-.....+++ .+.+ .++++-...+.|+.++. ++....+..... .-.....|+++
T Consensus 334 ~~~P~giav~~n~~y~~dd~~g-~lyvaD~~n~~I~~~~~-~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~ 411 (433)
T 4hw6_A 334 LWGPNQGIFVKNEAYAGEEDEY-DFYFCDRDSHTVRVLTP-EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDM 411 (433)
T ss_dssp CSSEEEEEEEECGGGTTSSCCE-EEEEEETTTTEEEEECT-TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEET
T ss_pred EcCCccEEEEccccccccCCCC-cEEEEECCCCEEEEECC-CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEEC
Confidence 123567888 5655 66666667788999985 443222221100 01236788998
Q ss_pred CCCCcEEEEEeCCCcEEEEECC
Q 010769 459 EDSPFVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 459 pd~~~llasg~~dg~i~vwd~~ 480 (502)
+++. |+++=..+++|+.+++.
T Consensus 412 ~~g~-lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 412 KRKC-FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTE-EEEEEGGGTEEEEEEEC
T ss_pred CCCE-EEEEeCCCCEEEEEecC
Confidence 5555 56666666778877653
No 282
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.00073 Score=63.52 Aligned_cols=195 Identities=11% Similarity=0.176 Sum_probs=122.1
Q ss_pred CcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCC----CCc--EEEEEEC---CCcEEEEeCC--CCCCccc
Q 010769 279 RNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHH----SPQ--ILLSGSF---DRSVVMKDAR--ISTHSGF 347 (502)
Q Consensus 279 ~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~----~~~--~l~s~~~---dg~i~vwd~~--~~~~~~~ 347 (502)
..+++.....+-+.+||+ +|+.++.+.. +.++.+..-|. +.. ++++... +++|.+|++. +......
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i 116 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSM 116 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEEC
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeec
Confidence 346666677789999999 8888888863 56777776662 101 3344443 5789999773 3221111
Q ss_pred e-----Eeec-CCeEEEEe--CCCCC-CEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCC
Q 010769 348 K-----WAVA-ADVESLAW--DPHAE-HSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 348 ~-----~~~~-~~v~~v~~--~p~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
. .... ..+..+|+ +|.+. .++++...+|.+..|++....... ...+.+.++.. .+.+-.+...+.. .
T Consensus 117 ~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~--~~~~lVR~f~l-gsq~EgcvvDd~~-g 192 (355)
T 3amr_A 117 TDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGY--ISGKKVRAFKM-NSQTEGMAADDEY-G 192 (355)
T ss_dssp SCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSC--EEEEEEEEEEC-SSCEEEEEEETTT-T
T ss_pred cccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCc--ccceEEEEecC-CCCcceEEEcCCC-C
Confidence 0 0111 44555666 77543 468888889999999985321000 00245556554 4578888888876 7
Q ss_pred EEEEEeCCCcEEEEECCCC---CeeEEEEec-CC-CCCEEEEEE--cCCCC-cEEEEEeCCCcEEEEECC
Q 010769 419 LLATGSTDKMVKLWDLSNN---QPSCIASRN-PK-AGAVFSVAF--SEDSP-FVLAIGGSKGKLEIWDTL 480 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~---~~~~~~~~~-~~-~~~v~~~~~--spd~~-~llasg~~dg~i~vwd~~ 480 (502)
.|+.+-.+..|..++.... ....+.... ++ ...+..|++ .+++. |+|+++-.+.++.|||..
T Consensus 193 ~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 193 RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 8999998877777775422 122333332 22 236888888 45555 777777677899999997
No 283
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.02 E-value=0.0026 Score=65.28 Aligned_cols=164 Identities=14% Similarity=0.160 Sum_probs=96.5
Q ss_pred CcEEEEECCCCeeeEEecc--CC--------CCeEEEEEc-CCCC--cEEEEEECCCcEEEEeCCCCCCccceEeec---
Q 010769 289 KQVKIWDVAAGKCNLTLEH--HT--------DKVQAVAWN-HHSP--QILLSGSFDRSVVMKDARISTHSGFKWAVA--- 352 (502)
Q Consensus 289 g~v~vwd~~~~~~~~~~~~--h~--------~~v~~l~~~-~~~~--~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~--- 352 (502)
+.|..+|+.+|+.+..++. |. .++. +... .++. .+++.++.+|.++++|.++++.+.......
T Consensus 291 ~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~ 369 (582)
T 1flg_A 291 SGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNIT 369 (582)
T ss_dssp SEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCC
T ss_pred ceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCcc
Confidence 5899999999999888743 32 1222 2221 3442 368889999999999998876532111000
Q ss_pred ---------CC---------------------------------eEEEEeCCCCCCEEEEEe------------------
Q 010769 353 ---------AD---------------------------------VESLAWDPHAEHSFVVSL------------------ 372 (502)
Q Consensus 353 ---------~~---------------------------------v~~v~~~p~~~~~l~~~~------------------ 372 (502)
+. -..++++|... ++++..
T Consensus 370 ~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g-~~yv~~~~~~~~~~~~~~~~~~g~ 448 (582)
T 1flg_A 370 WASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTG-LFYVPANHWKEDYWTEEVSYTKGS 448 (582)
T ss_dssp SEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTC-CEEEEEECEEEEEEECCCCCCTTS
T ss_pred ccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCC-EEEEechhcceeeecccccccCCC
Confidence 00 01345666544 343322
Q ss_pred ---------------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC
Q 010769 373 ---------------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN 437 (502)
Q Consensus 373 ---------------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~ 437 (502)
..|.|..||+.++ +.+++...+. ++..-.+...+ .+++.++.|+.++.||.+++
T Consensus 449 ~~~g~~~~~~p~~~~~~G~l~A~D~~tG---------~~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 449 AYLGMGFRIKRMYDDHVGSLRAMDPVSG---------KVVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp CCCCEEEEEEESCSSCSEEEEEECTTTC---------CEEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTC
T ss_pred ceeccceeecCCCCCCcceEEEEECCCC---------CEEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCC
Confidence 2578999999887 6666665432 22221111223 67888999999999999999
Q ss_pred CeeEEEEecCCCCCE-EEEEEcCCCCcEEEE
Q 010769 438 QPSCIASRNPKAGAV-FSVAFSEDSPFVLAI 467 (502)
Q Consensus 438 ~~~~~~~~~~~~~~v-~~~~~spd~~~llas 467 (502)
+. +..+....+.+ .-+.|..+|+..+++
T Consensus 518 ~~--lW~~~~~~g~~a~P~~y~~~G~qYv~~ 546 (582)
T 1flg_A 518 KE--LWKFQTGSGIVSPPITWEQDGEQYLGV 546 (582)
T ss_dssp CE--EEEEECSSCCCSCCEEEEETTEEEEEE
T ss_pred CE--EEEecCCCCcccCceEEEECCEEEEEE
Confidence 84 44443322211 125566777633433
No 284
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.01 E-value=0.00042 Score=61.83 Aligned_cols=169 Identities=9% Similarity=-0.005 Sum_probs=111.6
Q ss_pred eeeEEeccCC--CCeEEEEEcCCCCcEEEEEECCC--cEEEEeCCCCCCccceEeecCCe--EEEEeCCCCCCEEEEEeC
Q 010769 300 KCNLTLEHHT--DKVQAVAWNHHSPQILLSGSFDR--SVVMKDARISTHSGFKWAVAADV--ESLAWDPHAEHSFVVSLE 373 (502)
Q Consensus 300 ~~~~~~~~h~--~~v~~l~~~~~~~~~l~s~~~dg--~i~vwd~~~~~~~~~~~~~~~~v--~~v~~~p~~~~~l~~~~~ 373 (502)
+.+.++. |. ...+.|.|++ + .++.+.+..| .|+.+|+.+++... ........ ..++.. +..++.+...
T Consensus 10 ~v~~~~p-hd~~~ftqGL~~~~-~-~LyestG~~g~S~v~~vD~~tgkv~~-~~~l~~~~fgeGi~~~--~~~ly~ltw~ 83 (243)
T 3mbr_X 10 RVVKRYP-HDTTAFTEGLFYLR-G-HLYESTGETGRSSVRKVDLETGRILQ-RAEVPPPYFGAGIVAW--RDRLIQLTWR 83 (243)
T ss_dssp EEEEEEE-CCTTCCEEEEEEET-T-EEEEEECCTTSCEEEEEETTTCCEEE-EEECCTTCCEEEEEEE--TTEEEEEESS
T ss_pred EEEEEcC-CCCccccccEEEEC-C-EEEEECCCCCCceEEEEECCCCCEEE-EEeCCCCcceeEEEEe--CCEEEEEEee
Confidence 3455663 44 4578999987 4 6777777754 89999999988665 33333333 333443 4556666778
Q ss_pred CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCC---CC
Q 010769 374 DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPK---AG 450 (502)
Q Consensus 374 dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~---~~ 450 (502)
++.+.+||..+. +.+.++.... .-..++ +++..++++ ..++.|.++|..+.+.........+ ..
T Consensus 84 ~~~v~v~D~~tl---------~~~~ti~~~~-~Gwglt--~dg~~L~vS-dgs~~l~~iDp~t~~~~~~I~V~~~g~~~~ 150 (243)
T 3mbr_X 84 NHEGFVYDLATL---------TPRARFRYPG-EGWALT--SDDSHLYMS-DGTAVIRKLDPDTLQQVGSIKVTAGGRPLD 150 (243)
T ss_dssp SSEEEEEETTTT---------EEEEEEECSS-CCCEEE--ECSSCEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECC
T ss_pred CCEEEEEECCcC---------cEEEEEeCCC-CceEEe--eCCCEEEEE-CCCCeEEEEeCCCCeEEEEEEEccCCcccc
Confidence 999999999987 6666666433 224554 455345554 4588899999999875433333222 13
Q ss_pred CEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccccc
Q 010769 451 AVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNRF 489 (502)
Q Consensus 451 ~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~~ 489 (502)
.++.+.|. +|. +++..-.+..|.+.|..+++.+..+-
T Consensus 151 ~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 151 NLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp CEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred cceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEE
Confidence 45667776 565 67666567799999999999876654
No 285
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.99 E-value=0.0013 Score=64.96 Aligned_cols=208 Identities=7% Similarity=0.081 Sum_probs=122.6
Q ss_pred cceeeEEecCC--CCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC---C-cEEEEeCC
Q 010769 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD---R-SVVMKDAR 340 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d---g-~i~vwd~~ 340 (502)
....+|+|.|+ .+ .|+.+...+.|+.+++.+++...... .......++|++++ .++++.... . .+..++..
T Consensus 139 ~~P~gvavd~~s~~g-~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~~P~giavd~dG-~lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYD-DLYWVGQRDAFRHVDFVNQYVDIKTT-NIGQCADVNFTLNG-DMVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp SCCCEEEECTTTTTC-EEEEECBTSCEEEEETTTTEEEEECC-CCSCEEEEEECTTC-CEEEEECCSCTTSEEEEEECGG
T ss_pred CCCceEEEccccCCC-EEEEEeCCCCEEEEECCCCEEEEeec-CCCCccEEEECCCC-CEEEEcCCCCcccceEEEEECC
Confidence 35678999984 34 45555444899999998877654433 45568999999999 555544322 1 23333332
Q ss_pred CCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-e-cCCCCeeEEEEcCCCCC
Q 010769 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-H-AHDKAVCTISYNPLVPN 418 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~-~h~~~v~~l~~sp~~~~ 418 (502)
.................++++|....++++-..++.|+.++..++ .....+ . .....-..++|+|++..
T Consensus 216 ~~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g---------~~~~~~~~~~~~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 216 SGFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATG---------TLTEEEVMMDTKGSNFHIVWHPTGDW 286 (433)
T ss_dssp GTTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTC---------CEEEEEEECSCCSSCEEEEECTTSSE
T ss_pred CCeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCC---------eEEEEEeccCCCCCcccEEEeCCCCE
Confidence 211111122234456778899954556666667888999998754 221111 1 11223346999999833
Q ss_pred EEEEEeCCCcEEEEECCC--CCe---eEEEEecC------------CCCCEEEEEE---------cCCCCcEEEEEeCCC
Q 010769 419 LLATGSTDKMVKLWDLSN--NQP---SCIASRNP------------KAGAVFSVAF---------SEDSPFVLAIGGSKG 472 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~--~~~---~~~~~~~~------------~~~~v~~~~~---------spd~~~llasg~~dg 472 (502)
++++-...+.|+.+++.. +.. ..+....+ .......+++ .+++. ++++-...+
T Consensus 287 LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~-lyvaD~~n~ 365 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYD-FYFCDRDSH 365 (433)
T ss_dssp EEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEE-EEEEETTTT
T ss_pred EEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCc-EEEEECCCC
Confidence 666666678899988653 221 11211101 1123667999 67776 566666678
Q ss_pred cEEEEECCCCccccccc
Q 010769 473 KLEIWDTLSDAGISNRF 489 (502)
Q Consensus 473 ~i~vwd~~~~~~~~~~~ 489 (502)
+|+.++. ++ .+....
T Consensus 366 ~I~~~~~-~G-~v~t~~ 380 (433)
T 4hw6_A 366 TVRVLTP-EG-RVTTYA 380 (433)
T ss_dssp EEEEECT-TS-EEEEEE
T ss_pred EEEEECC-CC-CEEEEE
Confidence 8999985 34 344443
No 286
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.95 E-value=0.0025 Score=65.84 Aligned_cols=210 Identities=9% Similarity=0.075 Sum_probs=129.7
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCCee-eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCC
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~ 344 (502)
-..+..|+|++.++.++.+-...+.|..+++..... ...+...-.....|++.+.+.+++++-...+.|.+.++.....
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~ 118 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLR 118 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCE
Confidence 345789999987565555655678899999875532 2233333357889999987656777777789999999876543
Q ss_pred ccceEeecCCeEEEEeCCCCCCEEEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE
Q 010769 345 SGFKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 345 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
.......-.....++++|.+..++++-. ..+.|...++... .........-...+.|++.+.+.+++++-
T Consensus 119 ~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~~~~P~Glald~~~~~LY~aD 189 (619)
T 3s94_A 119 KVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS---------SRFIIINSEIYWPNGLTLDYEEQKLYWAD 189 (619)
T ss_dssp EEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSSEEEEEEETTTTEEEEEE
T ss_pred EEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC---------ceEEEEeCCCCCCcEEEEEccCCEEEEEe
Confidence 3222223345778999887664455442 2467777776532 12222222345678999999764666666
Q ss_pred eCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 424 STDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
+..+.|..+++.......+.. ........+++..+ +++.+-...+.|...|..+++.+..+
T Consensus 190 ~~~~~I~~~~~dG~~~~~~~~--~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d~~tg~~~~~i 250 (619)
T 3s94_A 190 AKLNFIHKSNLDGTNRQAVVK--GSLPHPFALTLFED--ILYWTDWSTHSILACNKYTGEGLREI 250 (619)
T ss_dssp TTTCCEEEESSSCCEEC-----------CCCEEESSS--EEEEECTTTCSEEEEESSSCCCCEEC
T ss_pred CCCCeEEEecCCCCccEEEEe--CCCCCceEEEEeCC--EEEEecCCCCEEEEEECCCCcccEEE
Confidence 667889999987654322222 11222356777666 46776666788999999887755433
No 287
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.94 E-value=0.0013 Score=64.89 Aligned_cols=159 Identities=11% Similarity=0.178 Sum_probs=99.0
Q ss_pred cceeeEEecC-CCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCC----cEEEEeCCC
Q 010769 267 DSVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARI 341 (502)
Q Consensus 267 ~~V~~l~~~~-~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~ 341 (502)
.....|+++| +.+ .|+.+...+.|+.+|+..++...... .......|+|++++..++++....+ .+.+++..
T Consensus 137 ~~P~~lavdp~~~g-~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~- 213 (430)
T 3tc9_A 137 GGAVWLSFDPKNHN-HLYLVGEQHPTRLIDFEKEYVSTVYS-GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRE- 213 (430)
T ss_dssp SCCCEEEEETTEEE-EEEEEEBTEEEEEEETTTTEEEEEEC-CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGG-
T ss_pred CCCCEEEECCCCCC-eEEEEeCCCcEEEEECCCCEEEEEec-CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCC-
Confidence 3567899998 434 45555555889999998776544443 4566889999999932444444332 23334432
Q ss_pred CCCc-cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEE
Q 010769 342 STHS-GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLL 420 (502)
Q Consensus 342 ~~~~-~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 420 (502)
+... ............++++|.+..++++-...+.|+.|+...... ..+.... .......++|+|++..++
T Consensus 214 g~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-------~~~~~~~-~~~~P~gia~~pdG~~ly 285 (430)
T 3tc9_A 214 SGFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-------TPLFTIQ-DSGWEFHIQFHPSGNYAY 285 (430)
T ss_dssp GTSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-------EEEEECS-SSSCCEEEEECTTSSEEE
T ss_pred CceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-------EEEEEcC-CCCcceeEEEcCCCCEEE
Confidence 2222 112223455678889995555677777788999999875410 0111111 224567899999983366
Q ss_pred EEEeCCCcEEEEECCC
Q 010769 421 ATGSTDKMVKLWDLSN 436 (502)
Q Consensus 421 ~t~s~dg~i~vwd~~~ 436 (502)
++-...+.|..++...
T Consensus 286 v~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 286 IVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEETTTTEEEEEEEET
T ss_pred EEECCCCEEEEEeCCc
Confidence 6666788899987653
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.92 E-value=0.0026 Score=63.14 Aligned_cols=213 Identities=8% Similarity=0.079 Sum_probs=120.0
Q ss_pred cceeeEEe-------cCCCCcEEEEEecCC------cEEEEECCC-Ceee-----EEeccCCCCeEEEEEcCCCCcEEEE
Q 010769 267 DSVLGLAW-------NKEFRNILASASADK------QVKIWDVAA-GKCN-----LTLEHHTDKVQAVAWNHHSPQILLS 327 (502)
Q Consensus 267 ~~V~~l~~-------~~~~~~~l~sgs~Dg------~v~vwd~~~-~~~~-----~~~~~h~~~v~~l~~~~~~~~~l~s 327 (502)
.....|+| ++++..++++...++ .|.+.+... +... ..+... .....++.+|.+..++++
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~giavdp~~g~LYvt 264 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCNGATIHPINGELYFN 264 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCCCEEECTTTCCEEEE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-CCceEEEEcCCCCeEEEE
Confidence 46889999 999553444443332 266665333 2221 122211 234577889966577777
Q ss_pred EECCCcEEEEeCC-------CCCC-----------ccceEee--cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCC
Q 010769 328 GSFDRSVVMKDAR-------ISTH-----------SGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKS 387 (502)
Q Consensus 328 ~~~dg~i~vwd~~-------~~~~-----------~~~~~~~--~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~ 387 (502)
-..++.|..+|+. ++.. ....... ......++|+|++..++++-+....|+.++......
T Consensus 265 d~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~ 344 (496)
T 3kya_A 265 SYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKK 344 (496)
T ss_dssp ETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTT
T ss_pred ECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcc
Confidence 7788899999987 4443 0011222 244679999999874555556788899876543210
Q ss_pred CCCCCCCCccEEEecC---C------------CCee-EEEEc-------CCCCCEEEEEeCCCcEEEEECCCCCeeEEEE
Q 010769 388 DPDSTSQQSSFTLHAH---D------------KAVC-TISYN-------PLVPNLLATGSTDKMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 388 ~~~~~~~~~~~~~~~h---~------------~~v~-~l~~s-------p~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~ 444 (502)
. ......+.+. . .... .++.. +.+ .++++-+..+.|+.++ .++....+.-
T Consensus 345 ~-----~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~gv~vd~~~~~~~~~g-~lyVaD~~N~rIr~i~-~~G~v~TiaG 417 (496)
T 3kya_A 345 E-----FITPYNFVGGYKQSGYRDDVGTEARMNNPCQGVFVKNPDYTGEEEY-DFYFVDRLNFCVRKVT-PEGIVSTYAG 417 (496)
T ss_dssp E-----ECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEEEEEECTTCCSSCCE-EEEEEEGGGTEEEEEC-TTCBEEEEEE
T ss_pred e-----ecccEEecCCCCCCcccCCcccccccCCCeEEEEEccccccccCCC-eEEEEECCCCEEEEEe-CCCCEEEEec
Confidence 0 0000112111 0 1223 44443 334 6666666778899998 4454333322
Q ss_pred ec-----------C----------CCCCEEEEEEcCC-CCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 445 RN-----------P----------KAGAVFSVAFSED-SPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 445 ~~-----------~----------~~~~v~~~~~spd-~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
.. + .-.....|+++++ +. |+++=..+.+|+.+++....++...
T Consensus 418 ~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~~g~-lyVaD~~N~rIrki~~~~~~~~~~~ 482 (496)
T 3kya_A 418 RGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDVKEM-FYVHDQVGHTIRTISMEQEENVAGD 482 (496)
T ss_dssp SCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETTTTE-EEEEETTTTEEEEEEECCCC-----
T ss_pred ccccccccCccccccCCCCchhhhhcCCCcEEEEECCCCE-EEEEeCCCCEEEEEECCCCcccccC
Confidence 10 1 1124678999997 65 6676667789999999887766543
No 289
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.90 E-value=0.0041 Score=65.94 Aligned_cols=161 Identities=11% Similarity=-0.014 Sum_probs=103.0
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-CcEEEEeCCCCCCc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHS 345 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~ 345 (502)
.....|++.+.+++++++-...+.|.+.++........+...-.....|++.|.++.++++-... +.|...++......
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~ 550 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY 550 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE
Confidence 45678888887667777778889999999875544333333445688999999864555554333 67888888654432
Q ss_pred cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEec--CCCCeeEEEEcCCCCCEEEEE
Q 010769 346 GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHA--HDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 346 ~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~t~ 423 (502)
......-.....|++++.+..++++-...+.|..+++... .....+.. .-....+|++.. .+++++-
T Consensus 551 ~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~---------~~~~v~~~~~~l~~P~glav~~--~~lYwtD 619 (791)
T 3m0c_C 551 SLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---------NRKTILEDEKRLAHPFSLAVFE--DKVFWTD 619 (791)
T ss_dssp EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---------SCEEEEECTTTTSSEEEEEEET--TEEEEEE
T ss_pred EEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC---------ceEEEecCCCccCCCCEEEEeC--CEEEEEE
Confidence 2221222467889999877755566566778999998653 12122222 123345666643 3566666
Q ss_pred eCCCcEEEEECCCCC
Q 010769 424 STDKMVKLWDLSNNQ 438 (502)
Q Consensus 424 s~dg~i~vwd~~~~~ 438 (502)
...+.|...+..+++
T Consensus 620 ~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 620 IINEAIFSANRLTGS 634 (791)
T ss_dssp TTTTEEEEEETTTCC
T ss_pred CCCCEEEEEeCCCCc
Confidence 667888888876654
No 290
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.86 E-value=0.004 Score=61.81 Aligned_cols=218 Identities=11% Similarity=0.069 Sum_probs=124.9
Q ss_pred ceeeEEecC-CCCcEEEEEecCCcEEEEECCCCeeeEEeccC---CCCeEEEEE-------cCCCCcEEEEEECCC-c--
Q 010769 268 SVLGLAWNK-EFRNILASASADKQVKIWDVAAGKCNLTLEHH---TDKVQAVAW-------NHHSPQILLSGSFDR-S-- 333 (502)
Q Consensus 268 ~V~~l~~~~-~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h---~~~v~~l~~-------~~~~~~~l~s~~~dg-~-- 333 (502)
....|+|.| +.++++++....+.|++.|+..+.....+... ......|+| ++++ ..|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G-~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEA-EYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTT-CEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCC-CEEEEEeCCCCCcc
Confidence 467899998 44555555554578999999887766544322 235889999 9998 5455554443 2
Q ss_pred ----EEEEeCCC-CCCcc----ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECC-------CCCCCCC-CCC---
Q 010769 334 ----VVMKDARI-STHSG----FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIR-------TAKSDPD-STS--- 393 (502)
Q Consensus 334 ----i~vwd~~~-~~~~~----~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~-------~~~~~~~-~~~--- 393 (502)
|.+++... +.... ...........++.+|.+..++++-..++.|..+|+. ++..... ...
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred cCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 66666333 12210 1222334566788999777777788889999999997 4421000 000
Q ss_pred -CCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC--CCe---eEEEEecCCC------------CCEE-E
Q 010769 394 -QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN--NQP---SCIASRNPKA------------GAVF-S 454 (502)
Q Consensus 394 -~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~--~~~---~~~~~~~~~~------------~~v~-~ 454 (502)
...+... ........|+|+|++..++++-+..+.|+.++... +.. ..+.-..+.. .... .
T Consensus 299 ~~~~l~~~-~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTI-ADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEEC-SSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEec-CCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 0011111 22344679999999833455556678898866533 221 1222211111 1234 4
Q ss_pred EEEc-------CCCCcEEEEEeCCCcEEEEECCCCcccccccc
Q 010769 455 VAFS-------EDSPFVLAIGGSKGKLEIWDTLSDAGISNRFS 490 (502)
Q Consensus 455 ~~~s-------pd~~~llasg~~dg~i~vwd~~~~~~~~~~~~ 490 (502)
++.. +++. |+++=....+|+.++. ++ .+.++.+
T Consensus 378 v~vd~~~~~~~~~g~-lyVaD~~N~rIr~i~~-~G-~v~TiaG 417 (496)
T 3kya_A 378 VFVKNPDYTGEEEYD-FYFVDRLNFCVRKVTP-EG-IVSTYAG 417 (496)
T ss_dssp EEEECTTCCSSCCEE-EEEEEGGGTEEEEECT-TC-BEEEEEE
T ss_pred EEEccccccccCCCe-EEEEECCCCEEEEEeC-CC-CEEEEec
Confidence 4454 4555 5666667788999983 44 4444443
No 291
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.84 E-value=0.00017 Score=75.83 Aligned_cols=162 Identities=10% Similarity=-0.016 Sum_probs=99.3
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-CcEEEEeCCCCCCcc
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-RSVVMKDARISTHSG 346 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-g~i~vwd~~~~~~~~ 346 (502)
....|++.+.+++++++-...+.|.++++........+.........|++.|.++.++++-... +.|.++++.......
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 3566788765566666666778999999876544333333334567889998764555544333 678887775433222
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.....-.....|+|+|.+..++++-+..+.|..+++.... ...+......-....+|++.. ..++++....
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~-------~~~~~~~~~~~~~P~glavd~--~~lywtd~~~ 604 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGN-------RKTILEDEKRLAHPFSLAVFE--DKVFWTDIIN 604 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSC-------CEEECCCSSSCSSCCCCEEET--TEEEEECSTT
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCc-------eEEEEecCCcCCCceEeEEEC--CEEEEEeCCC
Confidence 1111223467899999877777777778899999986431 011111111122344556654 2567777777
Q ss_pred CcEEEEECCCCC
Q 010769 427 KMVKLWDLSNNQ 438 (502)
Q Consensus 427 g~i~vwd~~~~~ 438 (502)
+.|..++..+++
T Consensus 605 ~~V~~~d~~~G~ 616 (699)
T 1n7d_A 605 EAIFSANRLTGS 616 (699)
T ss_dssp TCEEEEETTTEE
T ss_pred CeEEEEEccCCC
Confidence 889999987765
No 292
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.73 E-value=0.016 Score=55.36 Aligned_cols=238 Identities=11% Similarity=0.142 Sum_probs=121.6
Q ss_pred CcceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceee
Q 010769 192 FPLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLG 271 (502)
Q Consensus 192 ~~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~ 271 (502)
.|..++| .|+|+++++ ...|.|++++ +. . ..+.. ... ...........
T Consensus 32 ~P~~ia~-------~pdG~l~V~-e~~g~I~~i~-~g-~-~~~~~--------------------~~~-v~~~g~~~p~g 79 (352)
T 2ism_A 32 VPWALAF-------LPDGGMLIA-ERPGRIRLFR-EG-R-LSTYA--------------------ELS-VYHRGESGLLG 79 (352)
T ss_dssp CEEEEEE-------CTTSCEEEE-ETTTEEEEEE-TT-E-EEEEE--------------------ECC-CCCSTTCSEEE
T ss_pred CceEEEE-------cCCCeEEEE-eCCCeEEEEE-CC-C-ccEee--------------------cce-EeecCCCCcee
Confidence 3556666 688985555 4569999988 31 1 11000 000 11122356789
Q ss_pred EEecCC---CCcEEEEEecC-----CcEEEEECCCCe-----ee-EEec---cCCCCeEEEEEcCCCCcEEEEEEC----
Q 010769 272 LAWNKE---FRNILASASAD-----KQVKIWDVAAGK-----CN-LTLE---HHTDKVQAVAWNHHSPQILLSGSF---- 330 (502)
Q Consensus 272 l~~~~~---~~~~l~sgs~D-----g~v~vwd~~~~~-----~~-~~~~---~h~~~v~~l~~~~~~~~~l~s~~~---- 330 (502)
|+|+|+ ++.+.++-+.. +.|..|++..+. .+ ..+. ........|+|.|+| .++++.+.
T Consensus 80 ia~~pdf~~~g~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~ 158 (352)
T 2ism_A 80 LALHPRFPQEPYVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYER 158 (352)
T ss_dssp EEECTTTTTSCEEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCG
T ss_pred EEECCCCCCCCEEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCC
Confidence 999997 45455444433 678888876431 12 2232 111123689999999 66665432
Q ss_pred ---------CCcEEEEeCCCCC-----------CccceEeec-CCeEEEEeCCCCCCEEEEEeCCCe--------EEEEE
Q 010769 331 ---------DRSVVMKDARIST-----------HSGFKWAVA-ADVESLAWDPHAEHSFVVSLEDGT--------IKGFD 381 (502)
Q Consensus 331 ---------dg~i~vwd~~~~~-----------~~~~~~~~~-~~v~~v~~~p~~~~~l~~~~~dg~--------i~i~d 381 (502)
.|.|.-++....- .....+... .....++|+|....++++-..... |.+.
T Consensus 159 ~~~~d~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i- 237 (352)
T 2ism_A 159 ELAQDLASLGGKILRLTPEGEPAPGNPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLI- 237 (352)
T ss_dssp GGGGCTTCSSSEEEEECTTSSBCTTCTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEE-
T ss_pred ccccCCCCCceEEEEEcCCCCCCCCCcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEe-
Confidence 2456666654310 011122221 235678899944445554433332 3333
Q ss_pred CCCCCCC--C-------CCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee----EEEEecCC
Q 010769 382 IRTAKSD--P-------DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS----CIASRNPK 448 (502)
Q Consensus 382 ~~~~~~~--~-------~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~----~~~~~~~~ 448 (502)
..+... + ......++..+. +......++|. .+ .++++....+.|...++...... ....+...
T Consensus 238 -~~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~ 313 (352)
T 2ism_A 238 -VPGGNYGWPRVVGRGNDPRYRDPLYFWP-QGFPPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWRVLRVETALSG 313 (352)
T ss_dssp -CTTCBCCTTTCCSCCCCTTSCCCSEECT-TCCCEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEES
T ss_pred -ccCCcCCCCcccCCCCCCCCcCCeEecC-CCCCCcceEEE-CC-EEEEEECCCCEEEEEEECCCCcceeecchheeccc
Confidence 222100 0 000013444443 33346778884 34 66666666677887777644310 01111122
Q ss_pred CCCEEEEEEcCCCCcEEEEE
Q 010769 449 AGAVFSVAFSEDSPFVLAIG 468 (502)
Q Consensus 449 ~~~v~~~~~spd~~~llasg 468 (502)
.+.+..+++.|+|. |+++.
T Consensus 314 ~~rp~~v~~~pdG~-lyv~~ 332 (352)
T 2ism_A 314 FGRLREVQVGPDGA-LYVTT 332 (352)
T ss_dssp SCCEEEEEECTTSC-EEEEE
T ss_pred CCCeeEEEECCCCc-EEEEE
Confidence 36789999999997 45544
No 293
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.73 E-value=0.011 Score=55.02 Aligned_cols=204 Identities=10% Similarity=0.030 Sum_probs=119.2
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEE-ecc----CC--CCeEEEEE---cCCCCcEEEEEE-------
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLT-LEH----HT--DKVQAVAW---NHHSPQILLSGS------- 329 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~-~~~----h~--~~v~~l~~---~~~~~~~l~s~~------- 329 (502)
----+++|.+..+.++++.-..++|..|+...+..... +.. .. ..+..|.| .|.+ +++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~af~~ 91 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAKSFNF 91 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETTTTCT
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccccccc
Confidence 33457899887454444444789999999876543332 322 11 14579999 5776 7777544
Q ss_pred ------CCCcEEEEeCC---CCCCccceE--e-----------ecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCC
Q 010769 330 ------FDRSVVMKDAR---ISTHSGFKW--A-----------VAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAK 386 (502)
Q Consensus 330 ------~dg~i~vwd~~---~~~~~~~~~--~-----------~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~ 386 (502)
.+..|..||+. +++.....- . .......++..++|. ..++++.. +.|..++.....
T Consensus 92 ~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~Gn-aYVt~s~~~~~I~rV~pdG~~ 170 (334)
T 2p9w_A 92 ADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGN-SYVAFALGMPAIARVSADGKT 170 (334)
T ss_dssp TSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSC-EEEEEEESSCEEEEECTTSCC
T ss_pred cccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCC-EEEeCCCCCCeEEEEeCCCCE
Confidence 26779999998 555432111 0 112477899999875 66667767 777666655320
Q ss_pred CCCCCCCCCccEEEe----cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-cC---CCCCEEEE-EE
Q 010769 387 SDPDSTSQQSSFTLH----AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-NP---KAGAVFSV-AF 457 (502)
Q Consensus 387 ~~~~~~~~~~~~~~~----~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-~~---~~~~v~~~-~~ 457 (502)
...+-+. ......+.|+++|++ ++|++....|.|..+|+.......+... .+ .......| ..
T Consensus 171 --------~~~~~~~~~~~~~~~G~nGIv~~pdg-~~Liv~~~~g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~ 241 (334)
T 2p9w_A 171 --------VSTFAWESGNGGQRPGYSGITFDPHS-NKLIAFGGPRALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTV 241 (334)
T ss_dssp --------EEEEEECCCCSSSCCSCSEEEEETTT-TEEEEESSSSSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEE
T ss_pred --------EeeeeecCCCcccccCcceEEEeCCC-CEEEEEcCCCeEEEEcCCCCcceeecccccCCcccccCccccccc
Confidence 1111111 112347799999998 6666655599999999985321012111 01 11123343 33
Q ss_pred cCCCCcEEEEEeCCCcEEEEECCC
Q 010769 458 SEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 458 spd~~~llasg~~dg~i~vwd~~~ 481 (502)
-.+|..+|++.+..+.+.+.+...
T Consensus 242 ~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 242 PVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EETTEEEEEEEETTEEEEEECSST
T ss_pred ccCCEEEEEEcCCCCEEEEECCCC
Confidence 346764466666666666655443
No 294
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.71 E-value=0.034 Score=52.33 Aligned_cols=195 Identities=10% Similarity=0.055 Sum_probs=101.5
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCee-eEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEE-EeCCCCCC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC-NLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVM-KDARISTH 344 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~-~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~v-wd~~~~~~ 344 (502)
..+..|.+.++ +.+++++ .+|.|..- ...++. ......+...+..+.+.+++ .+++++ ..|.+.. .|-....-
T Consensus 122 ~~~~~i~~~~~-~~~~~~~-~~g~v~~S-~DgG~tW~~~~~~~~~~~~~~~~~~~~-~~~~~g-~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 122 GSPRLIKALGN-GSAEMIT-NVGAIYRT-KDSGKNWQALVQEAIGVMRNLNRSPSG-EYVAVS-SRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SCEEEEEEEET-TEEEEEE-TTCCEEEE-SSTTSSEEEEECSCCCCEEEEEECTTS-CEEEEE-TTSSEEEEECTTCSSC
T ss_pred CCeEEEEEECC-CCEEEEe-CCccEEEE-cCCCCCCEEeecCCCcceEEEEEcCCC-cEEEEE-CCCcEEEEeCCCCCce
Confidence 44677777665 4455544 45654321 122322 12223455678999999977 655554 4555544 33211111
Q ss_pred ccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEE
Q 010769 345 SGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 345 ~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
..........+..+.+.+++. +++.+.+|.+++.....+.. ...+..- ..+...+.++.+.+.+ .+++++
T Consensus 197 ~~~~~~~~~~~~~~~~~~~g~--~~~~~~~G~~~~s~~D~G~t------W~~~~~~~~~~~~~~~~v~~~~~~-~~~~~g 267 (327)
T 2xbg_A 197 EPHNRTTSRRLHNMGFTPDGR--LWMIVNGGKIAFSDPDNSEN------WGELLSPLRRNSVGFLDLAYRTPN-EVWLAG 267 (327)
T ss_dssp EEEECCSSSCEEEEEECTTSC--EEEEETTTEEEEEETTEEEE------ECCCBCTTSSCCSCEEEEEESSSS-CEEEEE
T ss_pred eECCCCCCCccceeEECCCCC--EEEEeCCceEEEecCCCCCe------eEeccCCcccCCcceEEEEecCCC-EEEEEe
Confidence 111112345678888988754 55566788877764221100 0000000 0122357888898865 555554
Q ss_pred eCCCcEEEEECCCCCeeEEEEe-cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEEC
Q 010769 424 STDKMVKLWDLSNNQPSCIASR-NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDT 479 (502)
Q Consensus 424 s~dg~i~vwd~~~~~~~~~~~~-~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~ 479 (502)
.++.| ++....++.-..... ......+.++.|.+++. +++++.+|.|.-++-
T Consensus 268 -~~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~--~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 268 -GAGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ--GFILGQKGILLRYVT 320 (327)
T ss_dssp -STTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE--EEEECSTTEEEEECC
T ss_pred -CCCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc--eEEEcCCceEEEEcC
Confidence 46766 455554442111111 12235678888876554 556678898776654
No 295
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.63 E-value=0.0068 Score=54.67 Aligned_cols=169 Identities=9% Similarity=0.134 Sum_probs=107.8
Q ss_pred EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee--cCCeEEEEeCCCCCCEEEEEeCCCeEEEEE
Q 010769 304 TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFD 381 (502)
Q Consensus 304 ~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~--~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d 381 (502)
.+.+-...+..++|+|++..++++...++.|...|.. ++... .... ......+++.+++. ++++.-.++.+.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~-~i~l~g~~D~EGIa~~~~g~-~~vs~E~~~~l~~~~ 97 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIR-TIPLDFVKDLETIEYIGDNQ-FVISDERDYAIYVIS 97 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEE-EEECSSCSSEEEEEECSTTE-EEEEETTTTEEEEEE
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEE-EEecCCCCChHHeEEeCCCE-EEEEECCCCcEEEEE
Confidence 4455556799999999875677778889999999987 44333 3322 25788999987653 555555678899998
Q ss_pred CCCCCCCCCCCCCCccEEEe------cCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC---CCeeEEEE-----ecC
Q 010769 382 IRTAKSDPDSTSQQSSFTLH------AHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN---NQPSCIAS-----RNP 447 (502)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~---~~~~~~~~-----~~~ 447 (502)
+..... ...+.... .......+++|+|.+ ..|+++.......+|.+.. .....+.. ...
T Consensus 98 v~~~~~------i~~~~~~~~~~~~~~~N~g~EGLA~d~~~-~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~ 170 (255)
T 3qqz_A 98 LTPNSE------VKILKKIKIPLQESPTNCGFEGLAYSRQD-HTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQF 170 (255)
T ss_dssp ECTTCC------EEEEEEEECCCSSCCCSSCCEEEEEETTT-TEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTC
T ss_pred cCCCCe------eeeeeeeccccccccccCCcceEEEeCCC-CEEEEEECcCCceEEEEcccccCCceeeecchhhcccc
Confidence 876521 01111111 234557899999987 4555555444444544431 11111211 112
Q ss_pred CCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 448 KAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 448 ~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
+...+.+++++|....+++.+.....|.++|....
T Consensus 171 ~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 171 TLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp CSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC
T ss_pred ccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC
Confidence 34457899999988778888888889999997643
No 296
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.61 E-value=0.051 Score=51.76 Aligned_cols=243 Identities=11% Similarity=0.103 Sum_probs=121.9
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
|..++| .|+|++|.++...|.|++++.+.. ...++. ...............|
T Consensus 20 P~~i~~-------~pdG~~l~V~e~~G~i~~~~~~g~-~~~~~~--------------------~~~~v~~~g~~g~~gi 71 (353)
T 2g8s_A 20 PWALAF-------LPDNHGMLITLRGGELRHWQAGKG-LSAPLS--------------------GVPDVWAHGQGGLLDV 71 (353)
T ss_dssp EEEEEE-------CSTTCCEEEEETTTEEEEEETTTE-ECCCCB--------------------SCCCCCCSTTCSEEEE
T ss_pred cEEEEE-------cCCCCEEEEEeCCceEEEEeCCCc-eeeEec--------------------CCcccccCCCCCceeE
Confidence 456666 688983445556799998875321 000000 0000111223457899
Q ss_pred EecCC---CCcEEEEEec-------CCcEEEEECCCC-------eeeE-Eecc---CCCCeEEEEEcCCCCcEEEEEEC-
Q 010769 273 AWNKE---FRNILASASA-------DKQVKIWDVAAG-------KCNL-TLEH---HTDKVQAVAWNHHSPQILLSGSF- 330 (502)
Q Consensus 273 ~~~~~---~~~~l~sgs~-------Dg~v~vwd~~~~-------~~~~-~~~~---h~~~v~~l~~~~~~~~~l~s~~~- 330 (502)
+|+|+ ++.+.++-+. ...|..|++... +.+. .+.. .......|.|.|+| .++++.+.
T Consensus 72 a~~pdf~~~g~lYv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~Gd~ 150 (353)
T 2g8s_A 72 VLAPDFAQSRRIWLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKG-YLFIALGEN 150 (353)
T ss_dssp EECTTHHHHCEEEEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSS-EEEEEECCT
T ss_pred EECCCCCCCCEEEEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCC-cEEEEECCC
Confidence 99995 3544444333 235666666532 1111 1110 11123579999999 66665443
Q ss_pred ------------CCcEEEEeCCCCCC-----------ccceEeec-CCeEEEEeCCCCCCEEEEEe-CCCeEEEEECCCC
Q 010769 331 ------------DRSVVMKDARISTH-----------SGFKWAVA-ADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTA 385 (502)
Q Consensus 331 ------------dg~i~vwd~~~~~~-----------~~~~~~~~-~~v~~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~ 385 (502)
.|.|.-++....-. ....+... .....++|+|....++++-. .++.=.+.-+..+
T Consensus 151 ~~~~~~q~~~~~~g~I~ri~~dG~~p~~npf~~~~~~~~~i~a~G~rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G 230 (353)
T 2g8s_A 151 NQRPTAQDLDKLQGKLVRLTDQGEIPDDNPFIKESGVRAEIWSYGIRNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKG 230 (353)
T ss_dssp TCGGGGGCTTSCTTEEEEEETTSCCCTTCTTTTSTTSCTTEEEECCSEEEEEEEETTTTEEEEEEECSBSCEEEECCCTT
T ss_pred CCCCccCCCCCCCeEEEEECCCCCCCCCCCCcCCCCCCccEEEEcCcCccceEEECCCCCEEEEecCCCCCcEEeEeccC
Confidence 24566666653200 11123222 23678999994343333322 1211122222211
Q ss_pred CCC----------------------CCCCCCCccEEEecCCCCeeEEEEcC-------CCCCEEEEEeCCCcEEEEECCC
Q 010769 386 KSD----------------------PDSTSQQSSFTLHAHDKAVCTISYNP-------LVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 386 ~~~----------------------~~~~~~~~~~~~~~h~~~v~~l~~sp-------~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
... .......++..+..| .....+.|.. ++ .++++....+.|...++..
T Consensus 231 ~nyGwp~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g-~l~v~~~~~~~v~~~~~~~ 308 (353)
T 2g8s_A 231 KNYGWPLATWGINYSGFKIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQ-KLFIGALKDKDVIVMSVNG 308 (353)
T ss_dssp CBCCTTTBCSSBCTTSSCCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTT-EEEEEETTTTEEEEEEEET
T ss_pred CcCCCCCccCCCCCCCCccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCC-cEEEEEccCCEEEEEEeCC
Confidence 100 000012344444433 4567788864 24 6777766778888888776
Q ss_pred CCeeEEEEe-cCCCCCEEEEEEcCCCCcEEEE
Q 010769 437 NQPSCIASR-NPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 437 ~~~~~~~~~-~~~~~~v~~~~~spd~~~llas 467 (502)
++......+ ......+..+++.|+|. |+++
T Consensus 309 ~~~~~~~~~~~~~~~rp~~v~~~pdG~-lyv~ 339 (353)
T 2g8s_A 309 DKVTEDGRILTDRGQRIRDVRTGPDGY-LYVL 339 (353)
T ss_dssp TEEEEEEEESGGGCCCEEEEEECTTSC-EEEE
T ss_pred CeEeeeEEcccCCCCceeEEEECCCCc-EEEE
Confidence 543222222 22235799999999998 4554
No 297
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.59 E-value=0.0043 Score=63.68 Aligned_cols=192 Identities=12% Similarity=0.115 Sum_probs=118.2
Q ss_pred EEEEEec-CCcEEEEEC-CCCeeeEEeccCCCC-----------eEEEEEcCCCC---cEEEEEECCCcEEEEeCCCCCC
Q 010769 281 ILASASA-DKQVKIWDV-AAGKCNLTLEHHTDK-----------VQAVAWNHHSP---QILLSGSFDRSVVMKDARISTH 344 (502)
Q Consensus 281 ~l~sgs~-Dg~v~vwd~-~~~~~~~~~~~h~~~-----------v~~l~~~~~~~---~~l~s~~~dg~i~vwd~~~~~~ 344 (502)
.|+.++. ++.|.-+|. .+|+.+.++...... ...+.+.|.+. ..++.++.++.|..+|..+++.
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~ 143 (599)
T 1w6s_A 64 KMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETGET 143 (599)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTCCE
T ss_pred EEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCCCE
Confidence 6777777 889999999 899988877532211 12244433331 2377888999999999998875
Q ss_pred ccceEeecC-----CeEE-EEeCCCCCCEEEEEe------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCC------
Q 010769 345 SGFKWAVAA-----DVES-LAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA------ 406 (502)
Q Consensus 345 ~~~~~~~~~-----~v~~-v~~~p~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~------ 406 (502)
.-.. .... .+.+ -... +. .+++++ .+|.|+.+|.+++ +.++++......
T Consensus 144 ~W~~-~~~~~~~~~~~~ssP~v~--~g-~V~vg~~g~e~g~~g~v~A~D~~TG---------~~~W~~~~~~~~~~~~~~ 210 (599)
T 1w6s_A 144 VWKV-ENSDIKVGSTLTIAPYVV--KD-KVIIGSSGAELGVRGYLTAYDVKTG---------EQVWRAYATGPDKDLLLA 210 (599)
T ss_dssp EEEE-ECCCGGGTCBCCSCCEEE--TT-EEEECCBCGGGTCCCEEEEEETTTC---------CEEEEEESSSCHHHHTBC
T ss_pred EEee-cCCCCCccceeecCCEEE--CC-EEEEEecccccCCCCeEEEEECCCC---------cEEEEEcCCCCccccccc
Confidence 4221 1111 1111 0111 23 566655 3799999999987 555555432111
Q ss_pred -------------------------------e-eEEEEcCCCCCEEEEEeCC----------------CcEEEEECCCCC
Q 010769 407 -------------------------------V-CTISYNPLVPNLLATGSTD----------------KMVKLWDLSNNQ 438 (502)
Q Consensus 407 -------------------------------v-~~l~~sp~~~~~l~t~s~d----------------g~i~vwd~~~~~ 438 (502)
+ ..+++.+.. .+++.++.+ +.|..+|..+++
T Consensus 211 p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~-g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~ 289 (599)
T 1w6s_A 211 SDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGT-NLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGE 289 (599)
T ss_dssp TTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCC
T ss_pred cccccccccccccccccccCCCcceecCCCccccceeEeCCC-CEEEEeCCCCccccCcccCCCccccceEEEEeCCCCc
Confidence 0 134555655 566666654 379999999998
Q ss_pred eeEEEEecCCC--------CCEEEEEEc-CCCC--cEEEEEeCCCcEEEEECCCCccccc
Q 010769 439 PSCIASRNPKA--------GAVFSVAFS-EDSP--FVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 439 ~~~~~~~~~~~--------~~v~~~~~s-pd~~--~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
..-.+....|. .++. +... .+|+ .+++.++.+|.++++|..+++.+..
T Consensus 290 ~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 290 AKFGYQKTPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp EEEEEESSTTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred eeeEeecCCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 54444444332 2232 2222 4562 2577788999999999999998754
No 298
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.58 E-value=0.061 Score=55.44 Aligned_cols=203 Identities=6% Similarity=0.039 Sum_probs=125.5
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..+.+|+|.+..+.++++-...+.|+.+++........+...-.....+++.+.+.+++++-+..+.|.+.++.......
T Consensus 349 ~~~~~ld~d~~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~~~ 428 (619)
T 3s94_A 349 RHAIAIDYDPVEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMRKI 428 (619)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE
T ss_pred CccEEEEEEcCCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeEEE
Confidence 45778999986565666666678899999876443333333335677888887664777777778899999987654322
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEe-CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSL-EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~-~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
.....-.....++++|..+.++++-. ..+.|...++... .........-...+.|++.+...++.++=+.
T Consensus 429 l~~~~l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~---------~~~~l~~~~l~~P~GlalD~~~~~LY~aD~~ 499 (619)
T 3s94_A 429 LISEDLEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGS---------DRVVLVNTSLGWPNGLALDYDEGKIYWGDAK 499 (619)
T ss_dssp EECTTCCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTEEEEEETT
T ss_pred EEECCCCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCC---------ccEEEEeCCCCCCeeeEEcccCCEEEEEECC
Confidence 11122345789999997554444432 2467777766532 1111222234567899999876455555556
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.+.|..+++.......+.. .......+++...+ +++.+-...+.|...+..++
T Consensus 500 ~~~I~~~~~dG~~~~~~~~--~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~g 552 (619)
T 3s94_A 500 TDKIEVMNTDGTGRRVLVE--DKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRSA 552 (619)
T ss_dssp TTEEEEEESSSCCCEEEEE--CCCCSSCCEEEETT--EEEEECTTSSCEEEEESSSC
T ss_pred CCEEEEEecCCCceEEEec--cCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCCC
Confidence 6789999987654332322 11222345565544 46666555667777777776
No 299
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.57 E-value=0.071 Score=59.05 Aligned_cols=291 Identities=11% Similarity=0.113 Sum_probs=145.2
Q ss_pred ccccccccccCC------CceEEEEEe-cCCcceeEEEEEecCCCCCCceeeeecccc--CCCcceeeeecCCCCCCCCC
Q 010769 139 SEDLEDMTINPN------DAVIVCARN-EDDVSHLEVYILEESDGGDPNLYVHHHIII--PAFPLCMAWLDCPLKDREKG 209 (502)
Q Consensus 139 ~~~v~~~~~~p~------~~~l~~~~~-~~~~~~l~v~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~w~~~~~~~s~~~ 209 (502)
+.+|.|+.+.|. .+++++|.. ++ +++|+.+.. . .. .+...+ ...|-.+....+ ...
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~---tv~I~sL~~--l---~~--~~~~~L~~~~~p~si~l~~~-----~~~ 617 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDI---SARILKLPS--F---EL--LHKEMLGGEIIPRSILMTTF-----ESS 617 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTT---EEEEEETTT--C---CE--EEEEECCSSCCEEEEEEEEE-----TTE
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCC---EEEEEECCC--C---Ce--EEEEECCCCCCCcEEEEEEe-----CCC
Confidence 357899999864 368899986 54 556665542 1 11 121122 224444433322 245
Q ss_pred CEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEecCC
Q 010769 210 NFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASASADK 289 (502)
Q Consensus 210 ~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs~Dg 289 (502)
.+|.+|-.||.+.-+.++........ .....+ | +.++.-..+...+..-++++|. .
T Consensus 618 ~~L~igl~dG~l~~~~~d~~tg~l~d---------------------~r~~~L-G-~~pv~L~~~~~~~~~~V~a~s~-r 673 (1158)
T 3ei3_A 618 HYLLCALGDGALFYFGLNIETGLLSD---------------------RKKVTL-G-TQPTVLRTFRSLSTTNVFACSD-R 673 (1158)
T ss_dssp EEEEEEETTSEEEEEEECTTTCCEEE---------------------EEEEEC-C-SSCCEEEEEESSSCEEEEEESS-S
T ss_pred cEEEEEeCCCeEEEEEEcCCCCcccc---------------------ceeEEc-C-CCceEEEEEeeCCceeEEEECC-C
Confidence 78999999999877776532111000 000011 1 2344333343333333333333 3
Q ss_pred cEEEEECCCCeeeE-EeccCCCCe-EEEEEcCCC-CcEEEEEECCCcEEEEeCCCCCC-ccceEeecCCeEEEEeCCCCC
Q 010769 290 QVKIWDVAAGKCNL-TLEHHTDKV-QAVAWNHHS-PQILLSGSFDRSVVMKDARISTH-SGFKWAVAADVESLAWDPHAE 365 (502)
Q Consensus 290 ~v~vwd~~~~~~~~-~~~~h~~~v-~~l~~~~~~-~~~l~s~~~dg~i~vwd~~~~~~-~~~~~~~~~~v~~v~~~p~~~ 365 (502)
...++--+ ++... .+. -..+ ....|+... +.-++.. .++.++|.-+..... ..........+..++++|..+
T Consensus 674 p~liy~~~-~~l~~s~l~--~~~v~~~~~F~se~~~~g~v~~-~~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~ 749 (1158)
T 3ei3_A 674 PTVIYSSN-HKLVFSNVN--LKEVNYMCPLNSDGYPDSLALA-NNSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQ 749 (1158)
T ss_dssp CEEEEESS-SSEEEEEBS--SSCCCEEEEECCSSSTTEEEEE-CSSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGT
T ss_pred CEEEEEcC-CceEEeccC--hHHhceEeccCcccCCCcEEEE-cCCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCC
Confidence 33334322 22221 111 1123 233454322 2334433 355699888754322 222345567788999998766
Q ss_pred CEEEEEeCC------------------------------------------------CeEEEEECCCCCCCCCCCCCCcc
Q 010769 366 HSFVVSLED------------------------------------------------GTIKGFDIRTAKSDPDSTSQQSS 397 (502)
Q Consensus 366 ~~l~~~~~d------------------------------------------------g~i~i~d~~~~~~~~~~~~~~~~ 397 (502)
.++++.+.. +.|+++|-.+. ..+
T Consensus 750 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~---------~~i 820 (1158)
T 3ei3_A 750 CFGVLSSRIEVQDTSGGTTALRPSASTQALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTF---------EVL 820 (1158)
T ss_dssp EEEEEEEEEEEECSSSSEEESSCCHHHHCSEEEECCCCCC----------CCCEEEEEEEEEEETTTC---------CEE
T ss_pred EEEEEEEeccccccccccchhhhhhhhhhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCC---------eEE
Confidence 333333211 12333443332 222
Q ss_pred EEEecC-CCCeeEEE---EcCCCCCEEEEEe----------CCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCc
Q 010769 398 FTLHAH-DKAVCTIS---YNPLVPNLLATGS----------TDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 398 ~~~~~h-~~~v~~l~---~sp~~~~~l~t~s----------~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
..+.-. ...+.+++ |......+|+.|+ ..|.|++|++...+...+.... ..++|++++--. | +
T Consensus 821 ~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL~lv~~~~-v~g~v~al~~~~-g-~ 897 (1158)
T 3ei3_A 821 HAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKLQTVAEKE-VKGAVYSMVEFN-G-K 897 (1158)
T ss_dssp EEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEEEEEEEEE-ESSCEEEEEEET-T-E
T ss_pred EEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEEEEEEEEE-cCCcCEEEeeeC-C-E
Confidence 222111 12233433 3333346888876 3478999999766654454433 467898887543 4 3
Q ss_pred EEEEEeCCCcEEEEECCCCcccc
Q 010769 464 VLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 464 llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+|++. ..+|++|++...+.++
T Consensus 898 Lla~i--g~~l~vy~l~~~~~L~ 918 (1158)
T 3ei3_A 898 LLASI--NSTVRLYEWTTEKELR 918 (1158)
T ss_dssp EEEEE--TTEEEEEEECTTSCEE
T ss_pred EEEEc--CCEEEEEECCCCceEE
Confidence 56544 4689999998766544
No 300
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.55 E-value=0.044 Score=56.62 Aligned_cols=207 Identities=8% Similarity=0.044 Sum_probs=129.0
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc------CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCC
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDAR 340 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~------h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~ 340 (502)
..+..|+|.+..+.++.+=...+.|+.+++........+.. ....+..|++...+.+++++-+..+.|.+.++.
T Consensus 340 ~~~~~ld~d~~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~~~ 419 (628)
T 4a0p_A 340 RNVRAIDYDPLDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTRLD 419 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCceEEEEecCCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEECC
Confidence 44778888887555555555667888888764433223322 234688999998875677777778899999986
Q ss_pred CCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCC--eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCC
Q 010769 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
.................++++|....++++-.... .|...++... .........-...+.|++.+...+
T Consensus 420 G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~---------~~~~l~~~~l~~P~gla~D~~~~~ 490 (628)
T 4a0p_A 420 GRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGT---------EREVLFFSGLSKPIALALDSRLGK 490 (628)
T ss_dssp SCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSC---------SCEEEECSSCSCEEEEEEETTTTE
T ss_pred CCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCC---------CcEEEEeccCCCccEEEEeCCCCE
Confidence 43222212223356889999996554555543333 5666666532 121222223446789999997645
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
+..+=+..+.|..+++.......+.. .......++++.. + +++.+-.....|...|..+++...
T Consensus 491 LYw~D~~~~~I~~~~~dG~~r~~~~~--~~~~~P~glav~~-~-~ly~tD~~~~~i~~~~k~~G~~~~ 554 (628)
T 4a0p_A 491 LFWADSDLRRIESSDLSGANRIVLED--SNILQPVGLTVFE-N-WLYWIDKQQQMIEKIDMTGREGRT 554 (628)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEEC--SSCSCEEEEEEET-T-EEEEEETTTTEEEEEETTSSSCCE
T ss_pred EEEEeCCCCEEEEEeCCCCceEEEEc--CCCCCcEEEEEEC-C-EEEEEECCCCeEEEEECcCCCCcE
Confidence 55555567889999997655322221 2334567888765 3 367776667788888888776543
No 301
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.51 E-value=0.059 Score=49.79 Aligned_cols=198 Identities=11% Similarity=0.129 Sum_probs=127.6
Q ss_pred EEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe-
Q 010769 272 LAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA- 350 (502)
Q Consensus 272 l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~- 350 (502)
.-.||. .++||.-. ..++.|+|+++.+.+..+.. ...|.-=.|-... .|+-.+ +..|+-|++.....+...+.
T Consensus 72 AIMnP~-~~ViALra-g~~LQiFnletK~klks~~~-~e~VvfWkWis~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR 145 (365)
T 2xzh_A 72 AIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDR 145 (365)
T ss_dssp EEECSS-SSEEEEEE-TTEEEEEETTTTEEEEEEEC-SSCEEEEEECSSS--EEEEEE-SSEEEEEESSTTCCCEEEEEC
T ss_pred eeeCCC-ccEEEEec-CCeEEEechHHhhhhcceec-CCccEEEEecCCC--eEEEEc-CCcEEEEcccCCCCCceeeec
Confidence 345887 66776655 68899999999999888874 4577777776654 444443 46799999976444433332
Q ss_pred e----cCCeEEEEeCCCCCCEEEEEe------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC--CCC
Q 010769 351 V----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL--VPN 418 (502)
Q Consensus 351 ~----~~~v~~v~~~p~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~ 418 (502)
| ...|.....+++...++++|- -.|.+.+|.... +..+.+.+|...-..+.+..+ ...
T Consensus 146 ~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~~ 215 (365)
T 2xzh_A 146 HSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEEST 215 (365)
T ss_dssp CGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTT----------TEEEEECCSEEEEEEECCTTCSSCEE
T ss_pred chhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecc----------cccceeeeeeeeeEEEecCCCCCCce
Confidence 2 345777788888877777664 347789999885 455666777554433332211 112
Q ss_pred EEEEEeC---CCcEEEEECCCC---Ce---eEEEE--ec--CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccc
Q 010769 419 LLATGST---DKMVKLWDLSNN---QP---SCIAS--RN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGI 485 (502)
Q Consensus 419 ~l~t~s~---dg~i~vwd~~~~---~~---~~~~~--~~--~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~ 485 (502)
+++.+.. .+.++|.++... .+ ..... +. .......++..++... ++..-+.-|.|++||+.++.++
T Consensus 216 lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg-viyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 216 LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp EEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCEE
T ss_pred EEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC-EEEEEeCCcEEEEEEcccCcEE
Confidence 3443333 257889988443 11 01111 11 1244566888888877 5777789999999999999987
Q ss_pred c
Q 010769 486 S 486 (502)
Q Consensus 486 ~ 486 (502)
.
T Consensus 295 ~ 295 (365)
T 2xzh_A 295 Y 295 (365)
T ss_dssp E
T ss_pred E
Confidence 4
No 302
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.42 E-value=0.092 Score=50.52 Aligned_cols=199 Identities=11% Similarity=0.145 Sum_probs=129.2
Q ss_pred eEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceE-
Q 010769 271 GLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKW- 349 (502)
Q Consensus 271 ~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~- 349 (502)
+.-.||. .++||.=. ..++.|+|+++...+..+.. ...|.-=.|-... .|+-.+ +..|+-|++.....+...+
T Consensus 70 sAIMnP~-~~iiALra-g~~lQiFnle~K~klks~~~-~e~VvfWkWis~~--~l~lVT-~taVyHWsi~~~s~P~kvFd 143 (494)
T 1bpo_A 70 SAIMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFD 143 (494)
T ss_dssp EEEECSS-SSCEEEEE-TTEEEEEETTTTEEEEEEEC-SSCCCEEEEEETT--EEEEEC-SSEEEEEESSSSCCCEEEEE
T ss_pred eeeeCCC-CcEEEEec-CCeEEEEchHHhhhhcceec-CCCceEEEecCCC--eEEEEc-CCeeEEecccCCCCchhhee
Confidence 3456787 55666654 68999999999998888875 4456666776544 444433 5689999997644433333
Q ss_pred ee----cCCeEEEEeCCCCCCEEEEEe------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC--CC
Q 010769 350 AV----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL--VP 417 (502)
Q Consensus 350 ~~----~~~v~~v~~~p~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~ 417 (502)
.| ...|.....+++...++++|- -.|.+.+|.... +....+.+|...-..+.+..+ ..
T Consensus 144 R~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er----------~~sQ~ieGhaa~F~~~~~~g~~~~~ 213 (494)
T 1bpo_A 144 RHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR----------KVSQPIEGHAASFAQFKMEGNAEES 213 (494)
T ss_dssp CCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT----------CCEEEECCSEEEEEEEECTTCSSEE
T ss_pred cchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc----------cccchheeeeeeeEEEecCCCCCCc
Confidence 22 345777788888887777664 347789999885 455667777665544443321 11
Q ss_pred CEEEEEeCC---CcEEEEECCCC---C-e--eEEEE--e--cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 418 NLLATGSTD---KMVKLWDLSNN---Q-P--SCIAS--R--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 418 ~~l~t~s~d---g~i~vwd~~~~---~-~--~~~~~--~--~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
.+++.+... +.++|.++... . + ..... + ........++..++... ++..-+.-|.|++||+.++.+
T Consensus 214 ~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg-viyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 214 TLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT-EEEEEETTSEEEEEETTTCCE
T ss_pred eEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC-EEEEEecCceEEEEeccccee
Confidence 344444443 68999988543 1 1 01111 1 12244566888888877 577778999999999999998
Q ss_pred cc
Q 010769 485 IS 486 (502)
Q Consensus 485 ~~ 486 (502)
+.
T Consensus 293 i~ 294 (494)
T 1bpo_A 293 IY 294 (494)
T ss_dssp EE
T ss_pred ee
Confidence 74
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.40 E-value=0.034 Score=52.18 Aligned_cols=146 Identities=10% Similarity=0.128 Sum_probs=90.5
Q ss_pred CCcEEEEECC--CCeeeEEecc------CC-CCeEEEEE--cCCCC-cEEEEEECCCcEEEEeCCCC---CC---ccceE
Q 010769 288 DKQVKIWDVA--AGKCNLTLEH------HT-DKVQAVAW--NHHSP-QILLSGSFDRSVVMKDARIS---TH---SGFKW 349 (502)
Q Consensus 288 Dg~v~vwd~~--~~~~~~~~~~------h~-~~v~~l~~--~~~~~-~~l~s~~~dg~i~vwd~~~~---~~---~~~~~ 349 (502)
+++|++|++. ++. +..+.. .. ..+..+++ +|... .++++...+|.+..|++... .. ....+
T Consensus 98 ~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f 176 (355)
T 3amr_A 98 KNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF 176 (355)
T ss_dssp CCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe
Confidence 5789999773 333 444421 11 45666777 67543 46888888999999998432 11 12345
Q ss_pred eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe-cC-CCCeeEEEE--cCCCCCEEEEEe-
Q 010769 350 AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH-AH-DKAVCTISY--NPLVPNLLATGS- 424 (502)
Q Consensus 350 ~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~-~h-~~~v~~l~~--sp~~~~~l~t~s- 424 (502)
...+.+..+...+... .|+++-++..|..|+........ ...+..+. ++ ...+..|++ .+++..+|++++
T Consensus 177 ~lgsq~EgcvvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~----~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQ 251 (355)
T 3amr_A 177 KMNSQTEGMAADDEYG-RLYIAEEDEAIWKFSAEPDGGSN----GTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQ 251 (355)
T ss_dssp ECSSCEEEEEEETTTT-EEEEEETTTEEEEEECSTTSCSC----CEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEG
T ss_pred cCCCCcceEEEcCCCC-eEEEecccceEEEEeCCcCCCCC----ceEEEEecCCccccCcceEEEEecCCCCEEEEEEcC
Confidence 6678899999998655 78888888777777755331100 12232221 12 246788888 455533555555
Q ss_pred CCCcEEEEECC-CCCe
Q 010769 425 TDKMVKLWDLS-NNQP 439 (502)
Q Consensus 425 ~dg~i~vwd~~-~~~~ 439 (502)
.++++.+||.. +.+.
T Consensus 252 G~~s~~Vydr~~~~~~ 267 (355)
T 3amr_A 252 GNSSYAIYDRQGKNKY 267 (355)
T ss_dssp GGTEEEEEESSTTCCE
T ss_pred CCCEEEEEECCCCCcE
Confidence 57799999997 4553
No 304
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.37 E-value=0.089 Score=48.64 Aligned_cols=246 Identities=13% Similarity=0.172 Sum_probs=144.4
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ...+.|+|+++...+.. + .....|.-=.|-.. +.|+-.
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks-------------------------~---~~~e~VvfWkWis~--~~L~lV 123 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------H---TMTDDVTFWKWISL--NTVALV 123 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEE-------------------------E---ECSSCEEEEEECSS--SEEEEE
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcc-------------------------e---ecCCccEEEEecCC--CeEEEE
Confidence 67888888765 57999999985222111 1 12356777788765 355555
Q ss_pred ecCCcEEEEECCC-CeeeEEeccC----CCCeEEEEEcCCCCcEEEEEE------CCCcEEEEeCCCCCCccceEeecCC
Q 010769 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~Dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.-|++.. ..+++.|..| ...|..-..+++..-++++|- -.|.+.+|......... ..+|.+.
T Consensus 124 T~-taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 201 (365)
T 2xzh_A 124 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 201 (365)
T ss_dssp ES-SEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEE-ECCSEEE
T ss_pred cC-CcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccce-eeeeeee
Confidence 54 5799999974 3566666444 356777777888844444443 23678888887543221 2222222
Q ss_pred eEEEEeC--CCCCCEEEEEeC---CCeEEEEECCCCCCCCCCCCCCccEEEe---cCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 355 VESLAWD--PHAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 355 v~~v~~~--p~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
...+... +....+|+.+.. .+.+++.++............+.+..+. +...-..++..++.. .+++.-+.-
T Consensus 202 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~ky-gviyviTK~ 280 (365)
T 2xzh_A 202 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITKY 280 (365)
T ss_dssp EEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTT-TEEEEEETT
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccC-CEEEEEeCC
Confidence 2222221 111223333322 2689999985541111010011111111 123445677888866 788888999
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccccc
Q 010769 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISNR 488 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~~ 488 (502)
|.|++||+.++. +++.-.-...+|+..+-+..... +++-...|.|.--.+.....+..+
T Consensus 281 G~ihlyDleTgt--~i~~nrIS~d~iF~ta~~~~~~G-i~~Vnr~GqVl~v~v~~~~ivpyi 339 (365)
T 2xzh_A 281 GYIHLYDLETGT--CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIPYI 339 (365)
T ss_dssp SEEEEEETTTCC--EEEEEECCSSCEEEEEEEGGGTE-EEEEETTCEEEEEEECTTTHHHHH
T ss_pred cEEEEEEcccCc--EEEEeccCCCceEEecccCCCCc-EEEEcCCCEEEEEEECcccEehhh
Confidence 999999999998 45544444567776666555443 445568898888888777665443
No 305
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.31 E-value=0.011 Score=54.88 Aligned_cols=185 Identities=16% Similarity=0.189 Sum_probs=94.0
Q ss_pred CcEEEEEecC-----CcEEEEECCCCe---e--eEEeccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCCC
Q 010769 279 RNILASASAD-----KQVKIWDVAAGK---C--NLTLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIST 343 (502)
Q Consensus 279 ~~~l~sgs~D-----g~v~vwd~~~~~---~--~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~ 343 (502)
+.+++.|+.+ ..+.+||+.+.+ - +..+........++.+ ++ .+++.|+.+ ..+.+||+.+.+
T Consensus 63 ~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~ 139 (301)
T 2vpj_A 63 DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQ 139 (301)
T ss_dssp TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE
T ss_pred CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCe
Confidence 4577777754 468999988765 2 2222211122222233 34 677777654 357888887643
Q ss_pred CccceEeec---CCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 344 HSGFKWAVA---ADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 344 ~~~~~~~~~---~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
-... .... ....++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ +
T Consensus 140 W~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~d~~~~~-------W~~~~~~p~~r~~~~~~~~--~ 206 (301)
T 2vpj_A 140 WSML-GDMQTAREGAGLVVA---SGVIYCLGGYDGLNILNSVEKYDPHTGH-------WTNVTPMATKRSGAGVALL--N 206 (301)
T ss_dssp EEEE-EECSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--T
T ss_pred EEEC-CCCCCCcccceEEEE---CCEEEEECCCCCCcccceEEEEeCCCCc-------EEeCCCCCcccccceEEEE--C
Confidence 2211 1111 11222233 23466666644 458888887642 0111111111111122222 2
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010769 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.+ ..+.+||+.+.+
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGR-LYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBEEEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCE-EEEEcCcCCCcccccEEEEcCCCCe
Confidence 3 677777764 4689999998875444332222222222333 454 67777765 357889987643
No 306
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.29 E-value=0.015 Score=54.17 Aligned_cols=164 Identities=10% Similarity=0.108 Sum_probs=104.1
Q ss_pred ccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEee-------cCCeEEEEe---CCCCCCEEEEEe---
Q 010769 306 EHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWAV-------AADVESLAW---DPHAEHSFVVSL--- 372 (502)
Q Consensus 306 ~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------~~~v~~v~~---~p~~~~~l~~~~--- 372 (502)
.....-..+++|++....++++.-..++|..|+...+......... ...+..+.| .|.+ .++++..
T Consensus 9 ~~~~~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~g-rL~vv~~~~~ 87 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSK-RLFAVMKNAK 87 (334)
T ss_dssp CCTTCCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCC-EEEEEEEETT
T ss_pred cCcccCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCC-cEEEEEcccc
Confidence 3334455678999876455555558999999998754332221111 113578999 6764 3555433
Q ss_pred ----------CCCeEEEEECC---CCCCCCCCCCCCccEEEe--cC-----------CCCeeEEEEcCCCCCEEEEEeCC
Q 010769 373 ----------EDGTIKGFDIR---TAKSDPDSTSQQSSFTLH--AH-----------DKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 373 ----------~dg~i~i~d~~---~~~~~~~~~~~~~~~~~~--~h-----------~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.+..|..||+. ++ +.++... .. ......++..++| +..++++.-
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg---------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~ 157 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENS---------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALG 157 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTC---------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEES
T ss_pred cccccccccCCCCEEEEEcCCcCCCC---------CEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCC
Confidence 26789999998 55 4444332 11 1247899999998 888888877
Q ss_pred -CcEEEEECCCCCeeEEEE-e--cCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 427 -KMVKLWDLSNNQPSCIAS-R--NPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 427 -g~i~vwd~~~~~~~~~~~-~--~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
+.|..++........... . .......+.|+++|++..|++ ....|.|..+|+.+
T Consensus 158 ~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv-~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 158 MPAIARVSADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIA-FGGPRALTAFDVSK 215 (334)
T ss_dssp SCEEEEECTTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEE-ESSSSSEEEEECSS
T ss_pred CCeEEEEeCCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEE-EcCCCeEEEEcCCC
Confidence 887777776543221111 1 111223678999999985454 44499999999884
No 307
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=97.27 E-value=0.027 Score=52.14 Aligned_cols=148 Identities=16% Similarity=0.176 Sum_probs=74.2
Q ss_pred CcEEEEEecC-----CcEEEEECCCCeeeE--EeccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCCCCcc
Q 010769 279 RNILASASAD-----KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~D-----g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 113 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 189 (301)
T 2vpj_A 113 DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTGHWTN 189 (301)
T ss_dssp TEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCCcEEe
Confidence 4567777654 368899988765332 22211112222222 34 677777754 458888887643211
Q ss_pred ce--EeecCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCE
Q 010769 347 FK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~--~~~~~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.. ........++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+.........+.+ ++ .+
T Consensus 190 ~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~-~i 256 (301)
T 2vpj_A 190 VTPMATKRSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDS-------WTTVTSMTTPRCYVGATVL--RG-RL 256 (301)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE-------EEEECCCSSCCBSCEEEEE--TT-EE
T ss_pred CCCCCcccccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCc-------EEECCCCCCcccceeEEEE--CC-EE
Confidence 00 000111223333 24467777654 468899987652 0111111111111122222 33 67
Q ss_pred EEEEeCC-----CcEEEEECCCCCeeEE
Q 010769 420 LATGSTD-----KMVKLWDLSNNQPSCI 442 (502)
Q Consensus 420 l~t~s~d-----g~i~vwd~~~~~~~~~ 442 (502)
++.|+.+ ..|.+||+.+.+...+
T Consensus 257 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 284 (301)
T 2vpj_A 257 YAIAGYDGNSLLSSIECYDPIIDSWEVV 284 (301)
T ss_dssp EEECCBCSSSBEEEEEEEETTTTEEEEE
T ss_pred EEEcCcCCCcccccEEEEcCCCCeEEEc
Confidence 7777765 3578899888764333
No 308
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.24 E-value=0.16 Score=48.93 Aligned_cols=244 Identities=13% Similarity=0.180 Sum_probs=146.2
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ..++.|||+++...+.. + .....|.-=.|-.. +.|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnle~K~klks-------------------------~---~~~e~VvfWkWis~--~~l~lV 122 (494)
T 1bpo_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------H---TMTDDVTFWKWISL--NTVALV 122 (494)
T ss_dssp CSSSSCEEEEE-TTEEEEEETTTTEEEEE-------------------------E---ECSSCCCEEEEEET--TEEEEE
T ss_pred CCCCcEEEEec-CCeEEEEchHHhhhhcc-------------------------e---ecCCCceEEEecCC--CeEEEE
Confidence 67788888765 68999999985222111 1 12346777777655 355555
Q ss_pred ecCCcEEEEECCC-CeeeEEeccC----CCCeEEEEEcCCCCcEEEEEE------CCCcEEEEeCCCCCCccceEeecCC
Q 010769 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~Dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.-|++.. ..+++.|..| ...|..-..+++..-++++|- -.|.+.+|......... ..+|.+.
T Consensus 123 T~-taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~-ieGhaa~ 200 (494)
T 1bpo_A 123 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (494)
T ss_dssp CS-SEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEE-ECCSEEE
T ss_pred cC-CeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccch-heeeeee
Confidence 44 5799999964 3566666444 356777778888844444443 24678889887654322 3333333
Q ss_pred eEEEEeCC--CCCCEEEEEeC---CCeEEEEECCCCCCCCCCCCCCccEEE----ecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 355 VESLAWDP--HAEHSFVVSLE---DGTIKGFDIRTAKSDPDSTSQQSSFTL----HAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 355 v~~v~~~p--~~~~~l~~~~~---dg~i~i~d~~~~~~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+.... ....+|+.+.. .+.+++.++.......... .+....+ .....--.++..++.. .+++.-+.
T Consensus 201 F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f-~kk~vdv~fppe~~~DFPvamqvs~ky-gviyviTK 278 (494)
T 1bpo_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-PKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 278 (494)
T ss_dssp EEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCC-CCEEEECCCCTTSTTCCEEEEEEETTT-TEEEEEET
T ss_pred eEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCc-cceeeeeeCCcccccCceeEEEecccC-CEEEEEec
Confidence 33333221 11223333333 3789999996541111000 1111111 1123445678888876 78888899
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
-|.|++||+.++. +++.-.-...+|+..+-...... +++-...|.|.--.+.....+..
T Consensus 279 ~G~i~lyDleTgt--~i~~nrIs~~~iF~t~~~~~~~G-i~~Vnr~GqVl~v~v~e~~ivpy 337 (494)
T 1bpo_A 279 YGYIHLYDLETGT--CIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIPY 337 (494)
T ss_dssp TSEEEEEETTTCC--EEEEEECCSSCEEEEEEETTTTE-EEEEETTCEEEEEEECTTTHHHH
T ss_pred CceEEEEecccce--eeeeecccCCceEEecccCCCCc-EEEEccCceEEEEEEccccchhh
Confidence 9999999999998 44444445567777776666554 45556889888888877666544
No 309
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.19 E-value=0.029 Score=52.09 Aligned_cols=186 Identities=15% Similarity=0.134 Sum_probs=94.4
Q ss_pred CcEEEEEecC----CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC------CcEEEEeCCCCCCcc
Q 010769 279 RNILASASAD----KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD------RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~D----g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d------g~i~vwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 56 ~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 56 NVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TEEEEECCBSSSBCCEEEEEETTTTEEEEEECCSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 4577777754 6788999988754322 2211112222223 34 677777765 458888887643111
Q ss_pred c--eEeecCCeEEEEeCCCCCCEEEEEeC---------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 347 F--KWAVAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 347 ~--~~~~~~~v~~v~~~p~~~~~l~~~~~---------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
. .........++.+ +..+++.|+. -..+.+||+.+.. ...+..+...... .++... +
T Consensus 133 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~-~~~~~~-~ 200 (306)
T 3ii7_A 133 KPSMLTQRCSHGMVEA---NGLIYVCGGSLGNNVSGRVLNSCEVYDPATET-------WTELCPMIEARKN-HGLVFV-K 200 (306)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEESCTTTCEECCCEEEEETTTTE-------EEEECCCSSCCBS-CEEEEE-T
T ss_pred CCCCcCCcceeEEEEE---CCEEEEECCCCCCCCcccccceEEEeCCCCCe-------EEECCCccchhhc-ceEEEE-C
Confidence 0 0000111222233 2345666643 3458889887652 0111111111111 122222 2
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010769 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+...........++.+ ++. +++.||.+ ..+.+||+.+.+
T Consensus 201 ~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 201 D-KIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSI-VYVLAGFQGVGRLGHILEYNTETDK 274 (306)
T ss_dssp T-EEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTE-EEEEECBCSSSBCCEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCE-EEEEeCcCCCeeeeeEEEEcCCCCe
Confidence 3 677777653 3588999988764443322222222233333 444 78888854 468999987754
No 310
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=97.13 E-value=0.019 Score=53.34 Aligned_cols=186 Identities=16% Similarity=0.155 Sum_probs=92.9
Q ss_pred CcEEEEEecC-----CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECCC-----cEEEEeCCCCCCcc
Q 010769 279 RNILASASAD-----KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFDR-----SVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~D-----g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~dg-----~i~vwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++ .+++.|+.++ .+.+||+.+..-..
T Consensus 62 ~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 62 GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TEEEEESCBCSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CEEEEEeCcCCCccccceEEECCCCCceeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 4577777654 3588999887753322 2211112222223 34 7777787654 46778876543111
Q ss_pred c--eEeecCCeEEEEeCCCCCCEEEEEeC-------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 347 F--KWAVAADVESLAWDPHAEHSFVVSLE-------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 347 ~--~~~~~~~v~~v~~~p~~~~~l~~~~~-------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
. .........++.+ +..+++.|+. -..+.+||+.+..- ..+..+.........+.+ ++
T Consensus 139 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~- 205 (302)
T 2xn4_A 139 VAPMNTRRSSVGVGVV---GGLLYAVGGYDVASRQCLSTVECYNATTNEW-------TYIAEMSTRRSGAGVGVL--NN- 205 (302)
T ss_dssp ECCCSSCCBSCEEEEE---TTEEEEECCEETTTTEECCCEEEEETTTTEE-------EEECCCSSCCBSCEEEEE--TT-
T ss_pred cCCCCCcccCceEEEE---CCEEEEEeCCCCCCCccccEEEEEeCCCCcE-------EECCCCccccccccEEEE--CC-
Confidence 0 0000111222233 2346666653 23588899876420 111111111111122222 23
Q ss_pred CEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC-----cEEEEECCCCc
Q 010769 418 NLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-----KLEIWDTLSDA 483 (502)
Q Consensus 418 ~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg-----~i~vwd~~~~~ 483 (502)
.+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.++ .+.+||+.++.
T Consensus 206 ~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 206 LLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCAV--NGL-LYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp EEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEECCBCSSSBCCCEEEEETTTTE
T ss_pred EEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCccccCeEEEE--CCE-EEEECCcCCCcccccEEEEcCCCCe
Confidence 777777754 3689999988765444332221111222222 444 677787653 48999997654
No 311
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.10 E-value=0.19 Score=47.17 Aligned_cols=151 Identities=9% Similarity=0.016 Sum_probs=83.4
Q ss_pred cccceeeEEecCCCCcEEEEEecCCcEEEEEC--CCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 265 HTDSVLGLAWNKEFRNILASASADKQVKIWDV--AAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 265 h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~--~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
+...+..+.+.++ +.+++.+...+..+-+|- .+.+.+. ......+..+.+.+++ .+ +.++.+|.+++.....+
T Consensus 161 ~~~~~~~~~~~~~-~~~~~~g~~G~~~~S~d~gG~tW~~~~--~~~~~~~~~~~~~~~g-~~-~~~~~~G~~~~s~~D~G 235 (327)
T 2xbg_A 161 AIGVMRNLNRSPS-GEYVAVSSRGSFYSTWEPGQTAWEPHN--RTTSRRLHNMGFTPDG-RL-WMIVNGGKIAFSDPDNS 235 (327)
T ss_dssp CCCCEEEEEECTT-SCEEEEETTSSEEEEECTTCSSCEEEE--CCSSSCEEEEEECTTS-CE-EEEETTTEEEEEETTEE
T ss_pred CCcceEEEEEcCC-CcEEEEECCCcEEEEeCCCCCceeECC--CCCCCccceeEECCCC-CE-EEEeCCceEEEecCCCC
Confidence 4456889999987 446665544333344442 2333332 2345678899998887 54 45566788777632211
Q ss_pred CCccc-eE---eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe---cCCCCeeEEEEcCC
Q 010769 343 THSGF-KW---AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---AHDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~-~~---~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~ 415 (502)
..-.. .. .....+.++.+.+.+. +++++.+|.| ++....+ ..-..+. .+...+.++.|.+.
T Consensus 236 ~tW~~~~~~~~~~~~~~~~v~~~~~~~--~~~~g~~g~i-~~S~DgG---------~tW~~~~~~~~~~~~~~~v~~~~~ 303 (327)
T 2xbg_A 236 ENWGELLSPLRRNSVGFLDLAYRTPNE--VWLAGGAGAL-LCSQDGG---------QTWQQDVDVKKVPSNFYKILFFSP 303 (327)
T ss_dssp EEECCCBCTTSSCCSCEEEEEESSSSC--EEEEESTTCE-EEESSTT---------SSCEECGGGTTSSSCCCEEEEEET
T ss_pred CeeEeccCCcccCCcceEEEEecCCCE--EEEEeCCCeE-EEeCCCC---------cccEEcCccCCCCCCeEEEEEECC
Confidence 11000 00 1123578888987543 4444557766 3333333 2222222 12456788888753
Q ss_pred CCCEEEEEeCCCcEEEEEC
Q 010769 416 VPNLLATGSTDKMVKLWDL 434 (502)
Q Consensus 416 ~~~~l~t~s~dg~i~vwd~ 434 (502)
..+++++.+|.|.-++-
T Consensus 304 --~~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 304 --DQGFILGQKGILLRYVT 320 (327)
T ss_dssp --TEEEEECSTTEEEEECC
T ss_pred --CceEEEcCCceEEEEcC
Confidence 45667777888776653
No 312
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=97.08 E-value=0.048 Score=50.59 Aligned_cols=150 Identities=9% Similarity=0.050 Sum_probs=75.4
Q ss_pred CcEEEEEecC------CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEEC---------CCcEEEEeCCC
Q 010769 279 RNILASASAD------KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSF---------DRSVVMKDARI 341 (502)
Q Consensus 279 ~~~l~sgs~D------g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~---------dg~i~vwd~~~ 341 (502)
+.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++ .+++.|+. -..+.+||+.+
T Consensus 102 ~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~ 178 (306)
T 3ii7_A 102 GKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPAT 178 (306)
T ss_dssp TEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTT
T ss_pred CEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCC
Confidence 4577777765 4689999988754332 2111111222222 34 66777664 34578888876
Q ss_pred CCCccce--EeecCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcC
Q 010769 342 STHSGFK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNP 414 (502)
Q Consensus 342 ~~~~~~~--~~~~~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp 414 (502)
..-.... ........++.+ +..+++.|+.+ ..+.+||+.+.. ...+..+........++.+
T Consensus 179 ~~W~~~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~-- 246 (306)
T 3ii7_A 179 ETWTELCPMIEARKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNE-------WKMVSPMPWKGVTVKCAAV-- 246 (306)
T ss_dssp TEEEEECCCSSCCBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTE-------EEECCCCSCCBSCCEEEEE--
T ss_pred CeEEECCCccchhhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCc-------EEECCCCCCCccceeEEEE--
Confidence 5321100 000111222333 23466666543 358889987642 0111111111112223333
Q ss_pred CCCCEEEEEeCC-----CcEEEEECCCCCeeEEEE
Q 010769 415 LVPNLLATGSTD-----KMVKLWDLSNNQPSCIAS 444 (502)
Q Consensus 415 ~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~ 444 (502)
++ .+++.|+.+ ..+.+||+.+.+...+..
T Consensus 247 ~~-~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~ 280 (306)
T 3ii7_A 247 GS-IVYVLAGFQGVGRLGHILEYNTETDKWVANSK 280 (306)
T ss_dssp TT-EEEEEECBCSSSBCCEEEEEETTTTEEEEEEE
T ss_pred CC-EEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCC
Confidence 23 777888754 458899998877544433
No 313
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.07 E-value=0.56 Score=51.99 Aligned_cols=192 Identities=16% Similarity=0.137 Sum_probs=95.1
Q ss_pred eccccCCCcceeeeecCCCCCCCCCCEEEEecC-CCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccC
Q 010769 185 HHIIIPAFPLCMAWLDCPLKDREKGNFMAVGSM-EPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKG 263 (502)
Q Consensus 185 ~~~~~~~~~~~~~w~~~~~~~s~~~~~la~g~~-dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (502)
....++.-+.|+...+.. .....++++|+|.. |++|+|+.++..+.+... .++. .
T Consensus 548 ~~~~l~~evscl~i~~~~-~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~-~L~~----------------------~ 603 (1158)
T 3ei3_A 548 SHTEMEHEVACLDITPLG-DSNGLSPLCAIGLWTDISARILKLPSFELLHKE-MLGG----------------------E 603 (1158)
T ss_dssp EEEECSSCEEEEECCCCS-SSTTCCSEEEEEETTTTEEEEEETTTCCEEEEE-ECCS----------------------S
T ss_pred cccCCCCceEEEEeecCC-CCcccccEEEEEECCCCEEEEEECCCCCeEEEE-ECCC----------------------C
Confidence 334456666777653221 11123689999997 999999999753222110 0100 0
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcEEEEECC--CCeeeE---EeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEe
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVA--AGKCNL---TLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~--~~~~~~---~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 338 (502)
.-...|.-+.+ .+..+|..|-.||.+.-+.+. +|.... .+-+ +.++.-..+...+...+++.+ +....+|-
T Consensus 604 ~~p~si~l~~~--~~~~~L~igl~dG~l~~~~~d~~tg~l~d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~ 679 (1158)
T 3ei3_A 604 IIPRSILMTTF--ESSHYLLCALGDGALFYFGLNIETGLLSDRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYS 679 (1158)
T ss_dssp CCEEEEEEEEE--TTEEEEEEEETTSEEEEEEECTTTCCEEEEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEE
T ss_pred CCCcEEEEEEe--CCCcEEEEEeCCCeEEEEEEcCCCCccccceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEE
Confidence 01122333334 234688899999998666553 444321 1222 345554445444433334333 44444444
Q ss_pred CCCCCCccceEeec-CCe-EEEEeCCCC-CCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 339 ARISTHSGFKWAVA-ADV-ESLAWDPHA-EHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 339 ~~~~~~~~~~~~~~-~~v-~~v~~~p~~-~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
-+ ++ .. ..... ..+ ....|+... +.-++..+ ++.++|..+.... ...+.++. -...+..++++|.
T Consensus 680 ~~-~~-l~-~s~l~~~~v~~~~~F~se~~~~g~v~~~-~~~LrI~~i~~~~-------~~~~~~ip-L~~Tprri~y~~~ 747 (1158)
T 3ei3_A 680 SN-HK-LV-FSNVNLKEVNYMCPLNSDGYPDSLALAN-NSTLTIGTIDEIQ-------KLHIRTVP-LYESPRKICYQEV 747 (1158)
T ss_dssp SS-SS-EE-EEEBSSSCCCEEEEECCSSSTTEEEEEC-SSCEEEEEECCSS-------SEEEEEEE-CSSEEEEEEEEGG
T ss_pred cC-Cc-eE-EeccChHHhceEeccCcccCCCcEEEEc-CCceEEEEecccC-------CeeEEEEe-CCCCceEEEEcCC
Confidence 33 11 11 11211 123 233454321 23344444 4569998876541 12333333 2356778888886
Q ss_pred C
Q 010769 416 V 416 (502)
Q Consensus 416 ~ 416 (502)
.
T Consensus 748 ~ 748 (1158)
T 3ei3_A 748 S 748 (1158)
T ss_dssp G
T ss_pred C
Confidence 5
No 314
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=97.07 E-value=0.016 Score=53.96 Aligned_cols=186 Identities=11% Similarity=0.116 Sum_probs=92.6
Q ss_pred CcEEEEEec----C-----CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCC
Q 010769 279 RNILASASA----D-----KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARIS 342 (502)
Q Consensus 279 ~~~l~sgs~----D-----g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~ 342 (502)
+.+++.|+. + ..+.+||+.+.+-... +........++.+ ++ .+++.|+.+ ..+.+||+.+.
T Consensus 71 ~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~ 147 (308)
T 1zgk_A 71 GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPERD 147 (308)
T ss_dssp TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETTTT
T ss_pred CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCCCC
Confidence 446666665 2 4688999887753322 2211112222333 34 677777644 35788888754
Q ss_pred CCccc--eEeecCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC
Q 010769 343 THSGF--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL 415 (502)
Q Consensus 343 ~~~~~--~~~~~~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~ 415 (502)
+-... .........++.+ +..+++.|+.+ ..+.+||+.+..- ..+..+......-..+.+ +
T Consensus 148 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~ 215 (308)
T 1zgk_A 148 EWHLVAPMLTRRIGVGVAVL---NRLLYAVGGFDGTNRLNSAECYYPERNEW-------RMITAMNTIRSGAGVCVL--H 215 (308)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEECCBCSSCBCCCEEEEETTTTEE-------EECCCCSSCCBSCEEEEE--T
T ss_pred eEeECCCCCccccceEEEEE---CCEEEEEeCCCCCCcCceEEEEeCCCCeE-------eeCCCCCCccccceEEEE--C
Confidence 31110 0001111223333 23466666644 4588898876421 111111111111222333 2
Q ss_pred CCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC-----CcEEEEECCCCc
Q 010769 416 VPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK-----GKLEIWDTLSDA 483 (502)
Q Consensus 416 ~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d-----g~i~vwd~~~~~ 483 (502)
+ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.+ ..+.+||+.+.+
T Consensus 216 ~-~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 216 N-CIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGR-IYVLGGYDGHTFLDSVECYDPDTDT 289 (308)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCSSCBCCEEEEEETTTTE
T ss_pred C-EEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCE-EEEEcCcCCCcccceEEEEcCCCCE
Confidence 3 677777664 4599999988764433322222112222222 444 67777754 358899987654
No 315
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.02 E-value=0.25 Score=47.00 Aligned_cols=198 Identities=12% Similarity=0.073 Sum_probs=102.4
Q ss_pred cceeeEEecCC---CCcEEEEEec---C----CcEEEEECCCC-------eee-EEecc-CCCCeEEEEEcCCCCcEEEE
Q 010769 267 DSVLGLAWNKE---FRNILASASA---D----KQVKIWDVAAG-------KCN-LTLEH-HTDKVQAVAWNHHSPQILLS 327 (502)
Q Consensus 267 ~~V~~l~~~~~---~~~~l~sgs~---D----g~v~vwd~~~~-------~~~-~~~~~-h~~~v~~l~~~~~~~~~l~s 327 (502)
.....|+|+|+ ++.+.++-+. + +.|..|++... +.+ ..+.. .......|.|.|+| .++++
T Consensus 73 ~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt 151 (354)
T 3a9g_A 73 AGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYIT 151 (354)
T ss_dssp CSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEE
T ss_pred CceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEE
Confidence 56889999997 4544444432 3 56777877644 111 11221 11124679999999 66665
Q ss_pred EEC-------------CCcEEEEeCCCCCC------ccceEee-cCCeEEEEeCCCCCCEEEEEeCCC---eEEEEECCC
Q 010769 328 GSF-------------DRSVVMKDARISTH------SGFKWAV-AADVESLAWDPHAEHSFVVSLEDG---TIKGFDIRT 384 (502)
Q Consensus 328 ~~~-------------dg~i~vwd~~~~~~------~~~~~~~-~~~v~~v~~~p~~~~~l~~~~~dg---~i~i~d~~~ 384 (502)
.+. .|.|.-++....-. ....+.. ......++|+|....++++-...+ .|.+.. .
T Consensus 152 ~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~--~ 229 (354)
T 3a9g_A 152 TGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWHRASGVMVATEHGPVGHDEVNIIL--K 229 (354)
T ss_dssp CCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEECTTTCCEEEEECCSSSCCEEEEEC--T
T ss_pred ECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEeCCCCCEEEEecCCCCCcEEEEec--C
Confidence 432 24565555543200 0112221 123567899994443444433222 243332 2
Q ss_pred CCC---------CCCCCCCCccEEEecCCCCeeEEEEc-------CCCCCEEEEEeCCCcEEEEECCCC-CeeEEEEe-c
Q 010769 385 AKS---------DPDSTSQQSSFTLHAHDKAVCTISYN-------PLVPNLLATGSTDKMVKLWDLSNN-QPSCIASR-N 446 (502)
Q Consensus 385 ~~~---------~~~~~~~~~~~~~~~h~~~v~~l~~s-------p~~~~~l~t~s~dg~i~vwd~~~~-~~~~~~~~-~ 446 (502)
+.. ........++..+.........++|. .++ .++++....+.|...++... +......+ .
T Consensus 230 G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~G~~~y~g~~fp~~~G-~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~ 308 (354)
T 3a9g_A 230 GGNYGWPLATGKAGRGEFVDPVIDTGSETWAPSGASFVHGDMFPGLRG-WLLIACLRGSMLAAVNFGDNMEVRKISTFFK 308 (354)
T ss_dssp TCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEEEEEECCSSSCGGGTT-EEEEEETTTTEEEEEEECGGGCEEEEEEECT
T ss_pred CCcCCCCcccCCCCCCCCcCCEeecCCCCcCCcceEEECCCCCcccCC-cEEEEEcCCCEEEEEEECCCCcccceeeecc
Confidence 110 00000013444442223457788884 344 66666666778888888753 22112222 2
Q ss_pred CCCCCEEEEEEcCCCCcEEEEEe
Q 010769 447 PKAGAVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 447 ~~~~~v~~~~~spd~~~llasg~ 469 (502)
.....+..+++.|||. |+++..
T Consensus 309 ~~~~rp~~v~~~pDG~-lyv~~~ 330 (354)
T 3a9g_A 309 NVFGRLRDVVIDDDGG-ILISTS 330 (354)
T ss_dssp TTSCCEEEEEECTTSC-EEEEEC
T ss_pred CCCCCeeEEEECCCCc-EEEEEe
Confidence 2346789999999997 565543
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.94 E-value=0.26 Score=54.63 Aligned_cols=244 Identities=12% Similarity=0.157 Sum_probs=137.4
Q ss_pred CCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEE
Q 010769 206 REKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASA 285 (502)
Q Consensus 206 s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sg 285 (502)
+|..+.||.=. ..++.|||+++...+.. + .....|.-=.|-.. +.|+-.
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks-------------------------~---~~~e~VvfWkWis~--~~l~lV 122 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKA-------------------------H---TMTDDVTFWKWISL--NTVALV 122 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcc-------------------------c---ccCCCceEEEecCC--CeeEEE
Confidence 67788888765 68999999975222211 1 12346777778665 245444
Q ss_pred ecCCcEEEEECCC-CeeeEEeccC----CCCeEEEEEcCCCCcEEEEEE------CCCcEEEEeCCCCCCccceEeecCC
Q 010769 286 SADKQVKIWDVAA-GKCNLTLEHH----TDKVQAVAWNHHSPQILLSGS------FDRSVVMKDARISTHSGFKWAVAAD 354 (502)
Q Consensus 286 s~Dg~v~vwd~~~-~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~------~dg~i~vwd~~~~~~~~~~~~~~~~ 354 (502)
+. ..|.-|++.. ..+++.|..| ...|..-..+++..-++++|- -.|.+.+|.+....... ..+|.+.
T Consensus 123 T~-~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~-iegha~~ 200 (1630)
T 1xi4_A 123 TD-NAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQP-IEGHAAS 200 (1630)
T ss_pred cC-CeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchh-hhHhHhh
Confidence 43 5799999964 3455555444 456777777888744444443 35788899887654322 2333332
Q ss_pred eEEEEeC--CCCCCEEEEEe---CCCeEEEEECCCC-CCCCCCCCCCccEEE---ecCCCCeeEEEEcCCCCCEEEEEeC
Q 010769 355 VESLAWD--PHAEHSFVVSL---EDGTIKGFDIRTA-KSDPDSTSQQSSFTL---HAHDKAVCTISYNPLVPNLLATGST 425 (502)
Q Consensus 355 v~~v~~~--p~~~~~l~~~~---~dg~i~i~d~~~~-~~~~~~~~~~~~~~~---~~h~~~v~~l~~sp~~~~~l~t~s~ 425 (502)
...+... +....+|+.+. ..+.+++.++... ...... ..+.+..+ .....-..++..++.. .++...+.
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f-~kk~~~~~~~~~~~~Dfpv~~~vs~k~-g~iy~itk 278 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPF-PKKAVDVFFPPEAQNDFPVAMQISEKH-DVVFLITK 278 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCC-ccccccccCCcccccCcceEEEecccc-CEEEEEec
Confidence 2222221 11122333222 1368999998654 111110 01111111 1123344567778765 78888888
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCccccc
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGISN 487 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~~ 487 (502)
-|.|.+||+.++.. ++.-.-...+|+..+.++.... +++....|.|.--.+.....+.-
T Consensus 279 ~G~~~~~d~~t~~~--i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~~~~iv~y 337 (1630)
T 1xi4_A 279 YGYIHLYDLETGTC--IYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVEEENIIPY 337 (1630)
T ss_pred CceEEEEecccchh--hhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEccchhhhh
Confidence 99999999999873 4333333455665555544333 44445777777666666555443
No 317
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.87 E-value=0.13 Score=48.86 Aligned_cols=183 Identities=13% Similarity=0.093 Sum_probs=102.0
Q ss_pred cceeeEEecC--CCCcEEEEEec---CCcEEEEECCCC--e--eeEEeccC-CCCeEEEEEcCCCCcEEEEEEC------
Q 010769 267 DSVLGLAWNK--EFRNILASASA---DKQVKIWDVAAG--K--CNLTLEHH-TDKVQAVAWNHHSPQILLSGSF------ 330 (502)
Q Consensus 267 ~~V~~l~~~~--~~~~~l~sgs~---Dg~v~vwd~~~~--~--~~~~~~~h-~~~v~~l~~~~~~~~~l~s~~~------ 330 (502)
.....|.+.+ ++..+|+.+.. ..+|.+|++... . .+.++.+. -...+.+.+.++| .++++...
T Consensus 112 f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 112 FNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPY 190 (355)
T ss_dssp CCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHH
T ss_pred eeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcc
Confidence 4566677655 33334544422 467888877543 2 23344332 2457889999998 66666531
Q ss_pred -----------CCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEE
Q 010769 331 -----------DRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFT 399 (502)
Q Consensus 331 -----------dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~ 399 (502)
.|.|..++. .+ .......-...+.++|+|++..++++-+..+.|..|++..... ......
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~--~~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~------l~~~~~ 261 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSP--ND-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWT------LTPLRV 261 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECT--TC-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSC------EEEEEE
T ss_pred cccchhhccCCccEEEEEEC--Ce-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCc------EecCEE
Confidence 244555554 22 2222333456789999999886666777889999999874210 011122
Q ss_pred EecCCCCeeEEEEcC-CCCCEEEEEeCC-CcEEEEECCCCCeeEEEEecC---CCCCEEEEEEcCCCC
Q 010769 400 LHAHDKAVCTISYNP-LVPNLLATGSTD-KMVKLWDLSNNQPSCIASRNP---KAGAVFSVAFSEDSP 462 (502)
Q Consensus 400 ~~~h~~~v~~l~~sp-~~~~~l~t~s~d-g~i~vwd~~~~~~~~~~~~~~---~~~~v~~~~~spd~~ 462 (502)
+ ...+..-.+++.+ +| ++.+++..+ +.|..|+.....+..+..+.. ....+..+ |..+|+
T Consensus 262 ~-~~~g~PDGi~vD~e~G-~lwva~~~~g~~v~~~~P~~~~~s~v~rI~~~~~~~~~v~~v-~~ddG~ 326 (355)
T 3sre_A 262 L-SFDTLVDNISVDPVTG-DLWVGCHPNGMRIFFYDAENPPGSEVLRIQDILSEEPKVTVV-YAENGT 326 (355)
T ss_dssp E-ECSSEEEEEEECTTTC-CEEEEEESCHHHHHSCCTTSCCCEEEEEEECTTSSSCEEEEE-EEECSS
T ss_pred E-eCCCCCceEEEeCCCC-cEEEEecCCceEEEEECCCCCCCCEEEEEEccCCCCcEEEEE-EEcCCC
Confidence 2 2345678889998 57 666666544 345455544323333443332 23344444 444665
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.74 E-value=0.3 Score=46.18 Aligned_cols=187 Identities=6% Similarity=-0.030 Sum_probs=104.4
Q ss_pred ceeeEEecCCCCcEEEEEe-------------cCCcEEEEECCCC--eee-EEecc-----CCCCeEEEEEcC--CCCcE
Q 010769 268 SVLGLAWNKEFRNILASAS-------------ADKQVKIWDVAAG--KCN-LTLEH-----HTDKVQAVAWNH--HSPQI 324 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs-------------~Dg~v~vwd~~~~--~~~-~~~~~-----h~~~v~~l~~~~--~~~~~ 324 (502)
..-.+...|+ + ++++++ .+|.|.++|+.+. +.. ..+.+ ..-....+.+.+ ++..+
T Consensus 51 G~EDi~~~~~-G-~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILPN-G-LAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECTT-S-EEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcCC-C-eEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 3456667776 4 444444 6899999998742 221 12222 223667777755 34334
Q ss_pred EEEEEC---CCcEEEEeCCCCCCccceE-ee----cCCeEEEEeCCCCCCEEEEEe-----------------CCCeEEE
Q 010769 325 LLSGSF---DRSVVMKDARISTHSGFKW-AV----AADVESLAWDPHAEHSFVVSL-----------------EDGTIKG 379 (502)
Q Consensus 325 l~s~~~---dg~i~vwd~~~~~~~~~~~-~~----~~~v~~v~~~p~~~~~l~~~~-----------------~dg~i~i 379 (502)
|+++.. +.+|.+|++.......... .. -...+.+.+.+++. ++++.. ..|.|..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr 207 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTY 207 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEE
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEE
Confidence 544433 4678888776543322111 11 23467888888764 333332 1245555
Q ss_pred EECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCC-CCeeEEEEecCCCCCEEEEEEc
Q 010769 380 FDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSN-NQPSCIASRNPKAGAVFSVAFS 458 (502)
Q Consensus 380 ~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~-~~~~~~~~~~~~~~~v~~~~~s 458 (502)
++.. . +..+...-...+.++|+|++..++++-+..+.|..|++.. +.......+. ..+..-.+++.
T Consensus 208 ~d~~-----------~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD 274 (355)
T 3sre_A 208 YSPN-----------D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVD 274 (355)
T ss_dssp ECTT-----------C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEEC
T ss_pred EECC-----------e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEe
Confidence 5542 1 1222222345689999999855556666788999999864 3332222232 24667889999
Q ss_pred C-CCCcEEEEEeCC
Q 010769 459 E-DSPFVLAIGGSK 471 (502)
Q Consensus 459 p-d~~~llasg~~d 471 (502)
+ +|. +.+++..+
T Consensus 275 ~e~G~-lwva~~~~ 287 (355)
T 3sre_A 275 PVTGD-LWVGCHPN 287 (355)
T ss_dssp TTTCC-EEEEEESC
T ss_pred CCCCc-EEEEecCC
Confidence 9 588 45545433
No 319
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=96.65 E-value=0.1 Score=48.67 Aligned_cols=186 Identities=10% Similarity=0.044 Sum_probs=90.5
Q ss_pred CcEEEEEec----C-------CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC--------CcEEEE
Q 010769 279 RNILASASA----D-------KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD--------RSVVMK 337 (502)
Q Consensus 279 ~~~l~sgs~----D-------g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d--------g~i~vw 337 (502)
+.+++.|+. + ..+.+||+.+++-... +.........+.+ ++ .+++.|+.+ ..+.+|
T Consensus 46 ~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 46 NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPLPSPRCLFGLGEA--LN-SIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCBSSCEESCEEEEE--TT-EEEEECCEESSTTCCBCCCEEEE
T ss_pred CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECCCCCcchhceeEEEE--CC-EEEEEeCCcCCCCCcccceEEEE
Confidence 457777763 1 1277889887754221 1111111122222 33 677777742 458888
Q ss_pred eCCCCCCccc--eEeecCCeEEEEeCCCCCCEEEEEeC------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 338 DARISTHSGF--KWAVAADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 338 d~~~~~~~~~--~~~~~~~v~~v~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
|+.+.+-... .........++.+ +..+++.|+. -..+.+||..+..- ..+..+......-.+
T Consensus 123 d~~~~~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W-------~~~~~~p~~r~~~~~ 192 (315)
T 4asc_A 123 DRLSFKWGESDPLPYVVYGHTVLSH---MDLVYVIGGKGSDRKCLNKMCVYDPKKFEW-------KELAPMQTARSLFGA 192 (315)
T ss_dssp ETTTTEEEECCCCSSCCBSCEEEEE---TTEEEEECCBCTTSCBCCCEEEEETTTTEE-------EECCCCSSCCBSCEE
T ss_pred CCCCCcEeECCCCCCcccceeEEEE---CCEEEEEeCCCCCCcccceEEEEeCCCCeE-------EECCCCCCchhceEE
Confidence 8876431110 0000111222222 2346666665 24688899876420 111111111111122
Q ss_pred EEEcCCCCCEEEEEeCCC-----cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC------------
Q 010769 410 ISYNPLVPNLLATGSTDK-----MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------------ 472 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~dg-----~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg------------ 472 (502)
+.+ ++ .+++.|+.++ .+.+||+.+.+...+............+.+ ++. +++.||.++
T Consensus 193 ~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-l~v~GG~~~~~~~~~~~~~~~ 266 (315)
T 4asc_A 193 TVH--DG-RIIVAAGVTDTGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGT-LYAIGGFATLETESGELVPTE 266 (315)
T ss_dssp EEE--TT-EEEEEEEECSSSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEEEEECTTSCEEEEE
T ss_pred EEE--CC-EEEEEeccCCCCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCE-EEEECCccccCcCCccccccc
Confidence 222 33 7777777654 488999988865444332222222222332 444 677787642
Q ss_pred --cEEEEECCCCc
Q 010769 473 --KLEIWDTLSDA 483 (502)
Q Consensus 473 --~i~vwd~~~~~ 483 (502)
.+.+||+.+.+
T Consensus 267 ~~~v~~yd~~~~~ 279 (315)
T 4asc_A 267 LNDIWRYNEEEKK 279 (315)
T ss_dssp EEEEEEEETTTTE
T ss_pred cCcEEEecCCCCh
Confidence 47788987653
No 320
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=96.61 E-value=0.24 Score=45.91 Aligned_cols=148 Identities=12% Similarity=0.122 Sum_probs=73.8
Q ss_pred CcEEEEEecC-----CcEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC-----CcEEEEeCCCCCCcc
Q 010769 279 RNILASASAD-----KQVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD-----RSVVMKDARISTHSG 346 (502)
Q Consensus 279 ~~~l~sgs~D-----g~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d-----g~i~vwd~~~~~~~~ 346 (502)
+.+++.|+.+ ..+.+||+.+.+-... +........++.+ ++ .+++.|+.+ ..+.+||+.+..-..
T Consensus 122 ~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~ 198 (308)
T 1zgk_A 122 GHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERNEWRM 198 (308)
T ss_dssp TEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTTEEEE
T ss_pred CEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCCeEee
Confidence 4466666543 4688999887653322 2211112222333 34 677777764 458888887543111
Q ss_pred ce--EeecCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCE
Q 010769 347 FK--WAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNL 419 (502)
Q Consensus 347 ~~--~~~~~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~ 419 (502)
.. ........++.+ +..+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++ .+
T Consensus 199 ~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~W-------~~~~~~p~~r~~~~~~~~--~~-~i 265 (308)
T 1zgk_A 199 ITAMNTIRSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETETW-------TFVAPMKHRRSALGITVH--QG-RI 265 (308)
T ss_dssp CCCCSSCCBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTEE-------EECCCCSSCCBSCEEEEE--TT-EE
T ss_pred CCCCCCccccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCcE-------EECCCCCCCccceEEEEE--CC-EE
Confidence 00 001111223333 24467777654 4688999876420 111111111111122222 23 67
Q ss_pred EEEEeCC-----CcEEEEECCCCCeeEE
Q 010769 420 LATGSTD-----KMVKLWDLSNNQPSCI 442 (502)
Q Consensus 420 l~t~s~d-----g~i~vwd~~~~~~~~~ 442 (502)
++.|+.+ ..+.+||+.+.+...+
T Consensus 266 ~v~GG~~~~~~~~~v~~yd~~~~~W~~~ 293 (308)
T 1zgk_A 266 YVLGGYDGHTFLDSVECYDPDTDTWSEV 293 (308)
T ss_dssp EEECCBCSSCBCCEEEEEETTTTEEEEE
T ss_pred EEEcCcCCCcccceEEEEcCCCCEEeec
Confidence 7777754 3478889888765444
No 321
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.46 E-value=0.21 Score=48.02 Aligned_cols=142 Identities=17% Similarity=0.228 Sum_probs=87.9
Q ss_pred CCcEEEEECCCCeeeEEeccC----CCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc-----------ceEe--
Q 010769 288 DKQVKIWDVAAGKCNLTLEHH----TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG-----------FKWA-- 350 (502)
Q Consensus 288 Dg~v~vwd~~~~~~~~~~~~h----~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~-----------~~~~-- 350 (502)
++.||.-++.....-+.+... -..|..+..+|.| .+|+..+ +..|.|..+..+.... ..+.
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG-~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSG-DLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTS-SEEEEEC-SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCC-CEEEEec-CCeEEEEEecCccccCcccccccccceeEEEcC
Confidence 467887787744333333321 2357889999999 7666654 5678888776322110 0111
Q ss_pred -----ecCCeEEEEeCCCCCC--EEEEEeCCCeEEEEECCCCCCCCC-CCCCCccEEEecCCCCeeEEEEcCCCCCEEEE
Q 010769 351 -----VAADVESLAWDPHAEH--SFVVSLEDGTIKGFDIRTAKSDPD-STSQQSSFTLHAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 351 -----~~~~v~~v~~~p~~~~--~l~~~~~dg~i~i~d~~~~~~~~~-~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t 422 (502)
...+|..+.|||-+.. .+++-+.|+.|++||+......+. .......+.+......|.+++|.+.+ -.|..
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~-lTLYv 196 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDG-LTLYC 196 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTS-SCEEE
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCC-cEEEE
Confidence 2467999999997543 899999999999999987421111 00001112223344678999999965 66666
Q ss_pred Ee--CCCcEEEE
Q 010769 423 GS--TDKMVKLW 432 (502)
Q Consensus 423 ~s--~dg~i~vw 432 (502)
.+ ..|-|+-.
T Consensus 197 l~~t~~GDIYAl 208 (452)
T 3pbp_A 197 LNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSCEEEEE
T ss_pred EecCCCCCEEEE
Confidence 44 77777543
No 322
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=96.44 E-value=0.46 Score=43.67 Aligned_cols=145 Identities=11% Similarity=0.103 Sum_probs=71.6
Q ss_pred CcEEEEEecCC-----cEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC-------CcEEEEeCCCCCC
Q 010769 279 RNILASASADK-----QVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKDARISTH 344 (502)
Q Consensus 279 ~~~l~sgs~Dg-----~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~ 344 (502)
+.+++.|+.++ .+.+||+.+.+-... +........++.+ ++ .+++.|+.+ ..+.+||+.+..-
T Consensus 109 ~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W 185 (302)
T 2xn4_A 109 GLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GG-LLYAVGGYDVASRQCLSTVECYNATTNEW 185 (302)
T ss_dssp TEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TT-EEEEECCEETTTTEECCCEEEEETTTTEE
T ss_pred CEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CC-EEEEEeCCCCCCCccccEEEEEeCCCCcE
Confidence 45777777553 578899887654322 2211112222222 33 677777643 3578888876431
Q ss_pred ccc--eEeecCCeEEEEeCCCCCCEEEEEeCC-----CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 345 SGF--KWAVAADVESLAWDPHAEHSFVVSLED-----GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 345 ~~~--~~~~~~~v~~v~~~p~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
... .........++.+ +..+++.|+.+ ..+.+||+.+..- ..+..+.........+.+ ++
T Consensus 186 ~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~W-------~~~~~~~~~r~~~~~~~~--~~- 252 (302)
T 2xn4_A 186 TYIAEMSTRRSGAGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNAW-------RQVADMNMCRRNAGVCAV--NG- 252 (302)
T ss_dssp EEECCCSSCCBSCEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTEE-------EEECCCSSCCBSCEEEEE--TT-
T ss_pred EECCCCccccccccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCCE-------eeCCCCCCccccCeEEEE--CC-
Confidence 110 0000111223333 24467777654 3688999876420 111111111111122222 33
Q ss_pred CEEEEEeCCC-----cEEEEECCCCCe
Q 010769 418 NLLATGSTDK-----MVKLWDLSNNQP 439 (502)
Q Consensus 418 ~~l~t~s~dg-----~i~vwd~~~~~~ 439 (502)
.+++.|+.++ .+.+||+.+.+.
T Consensus 253 ~i~v~GG~~~~~~~~~v~~yd~~~~~W 279 (302)
T 2xn4_A 253 LLYVVGGDDGSCNLASVEYYNPTTDKW 279 (302)
T ss_dssp EEEEECCBCSSSBCCCEEEEETTTTEE
T ss_pred EEEEECCcCCCcccccEEEEcCCCCeE
Confidence 6777777653 488999988763
No 323
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.37 E-value=0.69 Score=43.58 Aligned_cols=248 Identities=13% Similarity=0.084 Sum_probs=125.0
Q ss_pred cceeeeecCCCCCCCCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeE
Q 010769 193 PLCMAWLDCPLKDREKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGL 272 (502)
Q Consensus 193 ~~~~~w~~~~~~~s~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l 272 (502)
|..++| .|+|.++++--..|.|++++...... .+... ............+.|
T Consensus 34 P~~ia~-------~pdG~llVter~~G~I~~v~~~~g~~-~~v~~--------------------~~~v~~~g~~GllGi 85 (347)
T 3das_A 34 PWGLAP-------LPGGDLLVSSRDEATITRVDAKTGRK-TELGE--------------------VPGVSPSGEGGLLGI 85 (347)
T ss_dssp EEEEEE-------CTTSCEEEEETTTCEEEEECTTTCCE-EEEEE--------------------CTTCCCBTTBSEEEE
T ss_pred ceEEEE-------cCCCcEEEEEecCCEEEEEECCCCcE-eeecc--------------------cCceeecCCCCceee
Confidence 455655 68898777776589999887543211 01000 000112334678999
Q ss_pred EecCC---CCcEEEEE--ecCCcEEEEECCCC----------eee-EEec-cCCCCeEEEEEcCCCCcEEEEEEC-----
Q 010769 273 AWNKE---FRNILASA--SADKQVKIWDVAAG----------KCN-LTLE-HHTDKVQAVAWNHHSPQILLSGSF----- 330 (502)
Q Consensus 273 ~~~~~---~~~~l~sg--s~Dg~v~vwd~~~~----------~~~-~~~~-~h~~~v~~l~~~~~~~~~l~s~~~----- 330 (502)
+++|+ ++.+.++- ..++.|.-|.+..+ +.+ ..+. ........|.|.|+| .++++.+.
T Consensus 86 a~~Pdf~~~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~ 164 (347)
T 3das_A 86 ALSPDYASDHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTG 164 (347)
T ss_dssp EECTTHHHHCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGG
T ss_pred EeccccccCCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCc
Confidence 99985 24333322 23456666665541 111 1221 111124569999999 66666542
Q ss_pred --------CCcEEEEeCCCCCC------ccceEeec-CCeEEEEeCCCCCCEEEEE-eCCCeEEEEECCCCCCC------
Q 010769 331 --------DRSVVMKDARISTH------SGFKWAVA-ADVESLAWDPHAEHSFVVS-LEDGTIKGFDIRTAKSD------ 388 (502)
Q Consensus 331 --------dg~i~vwd~~~~~~------~~~~~~~~-~~v~~v~~~p~~~~~l~~~-~~dg~i~i~d~~~~~~~------ 388 (502)
.|.|.-.+....-. ....+... .....++|+|++. ++++- +.++.=.+.-+..+...
T Consensus 165 ~~qd~~~~~G~IlRi~~dG~ip~~nPf~~~~i~a~G~RNp~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~ 243 (347)
T 3das_A 165 LSQDRKSLGGKILRMTPDGEPAPGNPFPGSPVYSYGHRNVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAE 243 (347)
T ss_dssp GTTCTTCSTTCEEEECTTSSBCTTCSSTTCCEEEBCCSBCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCC
T ss_pred cccCCCCCCCEEEEEeCCCCccCCCCCCCCeEEeeCCCCcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCccc
Confidence 34555555442200 01122211 2356789999654 33332 23332233323322110
Q ss_pred ---CCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe--eEEEEecCCCCCEEEEEEcCCCCc
Q 010769 389 ---PDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP--SCIASRNPKAGAVFSVAFSEDSPF 463 (502)
Q Consensus 389 ---~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~--~~~~~~~~~~~~v~~~~~spd~~~ 463 (502)
.......++..+..+....+.++|.. + .+++..-..+.|....+..... .....+....+.+..++..|||..
T Consensus 244 g~~~~~~~~~P~~~~~~~~~ap~G~~~~~-g-~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~l 321 (347)
T 3das_A 244 GKGGGSGFHDPVAQWSTDEASPSGIAYAE-G-SVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKL 321 (347)
T ss_dssp SSCCCTTCCCCSEEECTTTCCEEEEEEET-T-EEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEE
T ss_pred CCCCCccccCCcEecCCCCCCCcceEEEc-C-ceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcE
Confidence 00111244555554444667888874 3 5666655566676666654431 112223344578999999999974
Q ss_pred EEEEEeCCC
Q 010769 464 VLAIGGSKG 472 (502)
Q Consensus 464 llasg~~dg 472 (502)
.+++...+|
T Consensus 322 yv~td~~~g 330 (347)
T 3das_A 322 WLVTSNTDG 330 (347)
T ss_dssp EEEECTTSS
T ss_pred EEEEcCCCC
Confidence 333333343
No 324
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.23 E-value=0.4 Score=45.45 Aligned_cols=64 Identities=13% Similarity=0.035 Sum_probs=33.1
Q ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE
Q 010769 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATG 423 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~ 423 (502)
....++|. .+ .++++....+.|...++........ ......+......+..+++.|+| .++++.
T Consensus 269 ap~G~~~~-~G-~l~v~~~~~~~v~~v~~~~~~~~~~---~~~~~~~~~~~~rp~~v~~~pdG-~lyv~~ 332 (352)
T 2ism_A 269 PPGNLAFF-RG-DLYVAGLRGQALLRLVLEGERGRWR---VLRVETALSGFGRLREVQVGPDG-ALYVTT 332 (352)
T ss_dssp CEEEEEEE-TT-EEEEEETTTTEEEEEEEEEETTEEE---EEEEEEEEESSCCEEEEEECTTS-CEEEEE
T ss_pred CCcceEEE-CC-EEEEEECCCCEEEEEEECCCCccee---ecchheecccCCCeeEEEECCCC-cEEEEE
Confidence 34566663 23 3566666667788777764310000 00011221223568889999988 554443
No 325
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.14 E-value=0.16 Score=44.18 Aligned_cols=185 Identities=8% Similarity=0.023 Sum_probs=94.6
Q ss_pred CcEEEEEecCCcEEEEECCCCe------eeEEecc-CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc----
Q 010769 279 RNILASASADKQVKIWDVAAGK------CNLTLEH-HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF---- 347 (502)
Q Consensus 279 ~~~l~sgs~Dg~v~vwd~~~~~------~~~~~~~-h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~---- 347 (502)
..+|+....| +|+.=....+. ...++.. -=..+..++|+|++ .+.++ .+|.+.-.+..+......
T Consensus 4 ~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 4 ESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred ceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCc-cEEEE--eCCeEEEECCCCCCcccccccc
Confidence 4467777777 66655444443 1222211 12377899999977 54444 678777666544322211
Q ss_pred -eEee--cCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCcc-EEEec-CCCCeeEEEEcCCCCCEEEE
Q 010769 348 -KWAV--AADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSS-FTLHA-HDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 348 -~~~~--~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~-h~~~v~~l~~sp~~~~~l~t 422 (502)
.... -....++.|.|++. |+++ .||.|+-++-.+..... ..-. ..+.. -=..+..|.|.|+| .+.+.
T Consensus 80 t~IG~~Gw~~F~a~~fD~~G~--LYav-~dG~iyr~~pP~~~~~~----Wl~~a~~vg~~gw~~~~~lff~p~G-~Lyav 151 (236)
T 1tl2_A 80 KKIGNGGWNQFQFLFFDPNGY--LYAV-SKDKLYKASPPQSDTDN----WIARATEVGSGGWSGFKFLFFHPNG-YLYAV 151 (236)
T ss_dssp EEEECSCGGGCSEEEECTTSC--EEEE-ETTEEEEESCCCSTTCC----HHHHSEEEECSSGGGEEEEEECTTS-CEEEE
T ss_pred cEecccccccceEEEECCCCC--EEEe-CCCEEEEeCCCcCCCCc----eeccccEeccCCCCceEEEEECCCc-eEEEE
Confidence 1110 01147889999764 4444 56999877654321100 0000 11111 11467999999987 55444
Q ss_pred EeCCCcEEEEECCCCC----e-eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 423 GSTDKMVKLWDLSNNQ----P-SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~----~-~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
. |+.++-+...... . .........-.....+.|+|++. ++++. +| ++|.....
T Consensus 152 ~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f~~~G~-l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 152 H--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFFSSVGT-LFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp E--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEECTTSC-EEEEE--TT--EEEEESCC
T ss_pred e--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEECCCCc-EEEEe--CC--eEEecCCc
Confidence 4 7775443332211 0 00111112222345577999997 45544 66 45554433
No 326
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.09 E-value=0.58 Score=44.97 Aligned_cols=121 Identities=13% Similarity=0.200 Sum_probs=74.8
Q ss_pred CeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCC-C--CCCccEEEec------CCCCeeEEEEcCCCC--CEEEE
Q 010769 354 DVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDS-T--SQQSSFTLHA------HDKAVCTISYNPLVP--NLLAT 422 (502)
Q Consensus 354 ~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~-~--~~~~~~~~~~------h~~~v~~l~~sp~~~--~~l~t 422 (502)
.+..+..+|+|. +++.. .+..|.+..+..+...... . .....+.+.. ...+|..+.|+|-+. ..|++
T Consensus 67 ~i~qlvlSpsG~-lLAl~-g~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSGD-LLCLF-NDNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTSS-EEEEE-CSSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCCC-EEEEe-cCCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 577899999876 44444 4668999988843211110 0 0011223322 257799999999753 48999
Q ss_pred EeCCCcEEEEECCCCCeeEE--------EEecCCCCCEEEEEEcCCCCcEEEEEe--CCCcEEEE
Q 010769 423 GSTDKMVKLWDLSNNQPSCI--------ASRNPKAGAVFSVAFSEDSPFVLAIGG--SKGKLEIW 477 (502)
Q Consensus 423 ~s~dg~i~vwd~~~~~~~~~--------~~~~~~~~~v~~~~~spd~~~llasg~--~dg~i~vw 477 (502)
-..|+.|++||+........ +........|.+++|.+++- .|.... ..|.|+-.
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~l-TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDLEFSKDGL-TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EETTSCEEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEEEECTTSS-CEEEEECTTSCEEEEE
T ss_pred EecCCEEEEEEcccCCCCCcchhccccccCCCcccceEEEEEEcCCCc-EEEEEecCCCCCEEEE
Confidence 99999999999986321111 12222335688999988664 455544 56666543
No 327
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.05 E-value=0.52 Score=52.32 Aligned_cols=197 Identities=11% Similarity=0.122 Sum_probs=118.9
Q ss_pred EecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce-Eee
Q 010769 273 AWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK-WAV 351 (502)
Q Consensus 273 ~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~-~~~ 351 (502)
-.||. .++||.=+ ..++.|+|+.+...+.++.. ...|.-=.|-... .|+..+ +..|..|++.....+... ..+
T Consensus 72 IMnP~-~~iiALra-g~~lQiFnl~~k~klks~~~-~e~VvfWkWis~~--~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 72 IMNPA-SKVIALKA-GKTLQIFNIEMKSKMKAHTM-TDDVTFWKWISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred ccCCC-cceEEEec-CCeEEEeehHHhhhhccccc-CCCceEEEecCCC--eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 45777 55665544 68999999999888877764 4567666776554 343333 467999999753333211 122
Q ss_pred ----cCCeEEEEeCCCCCCEEEEEe------CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEc--CCCCCE
Q 010769 352 ----AADVESLAWDPHAEHSFVVSL------EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYN--PLVPNL 419 (502)
Q Consensus 352 ----~~~v~~v~~~p~~~~~l~~~~------~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s--p~~~~~ 419 (502)
...|..-..+++...++++|- -.|.+.+|.+... ....+.+|...-..+... +....+
T Consensus 146 ~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~----------~sQ~iegha~~F~~~~~~~~~~~~~l 215 (1630)
T 1xi4_A 146 SSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK----------VSQPIEGHAASFAQFKMEGNAEESTL 215 (1630)
T ss_pred hhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccc----------cchhhhHhHhhhheeccCCCCCCceE
Confidence 456777778888777777664 4578899988754 333445554433333322 111123
Q ss_pred EEEEeC---CCcEEEEECCCC---CeeE----E-EEec--CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 420 LATGST---DKMVKLWDLSNN---QPSC----I-ASRN--PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 420 l~t~s~---dg~i~vwd~~~~---~~~~----~-~~~~--~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
++.+.. .+.++|-++... .+.. + ..++ .......++..++... ++..-+.-|.|.+||+.|+.++.
T Consensus 216 ~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g-~iy~itk~G~~~~~d~~t~~~i~ 294 (1630)
T 1xi4_A 216 FCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD-VVFLITKYGYIHLYDLETGTCIY 294 (1630)
T ss_pred EEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC-EEEEEecCceEEEEecccchhhh
Confidence 332222 267888888543 1100 0 0111 1233455777888776 56677889999999999999873
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.91 E-value=0.29 Score=46.37 Aligned_cols=57 Identities=11% Similarity=0.034 Sum_probs=31.1
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC------cEEEEECCCCccccc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG------KLEIWDTLSDAGISN 487 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg------~i~vwd~~~~~~~~~ 487 (502)
.+.+||+.+.+...+.........-.++. -++. +++.||.++ .|.++++.+++.+..
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~-i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNS-LLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC---CEEEEECSSCCBSSEEEE--ETTE-EEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCCceeeCCCCCCCcccceeEE--eCCE-EEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 47899999887655544443322222222 3455 678888653 366668888776643
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=95.68 E-value=1.3 Score=40.88 Aligned_cols=101 Identities=10% Similarity=0.067 Sum_probs=51.8
Q ss_pred CcEEEEEecC--------CcEEEEECCCCeeeE--EeccCCCCeEEEEEcCCCCcEEEEEEC-C-----CcEEEEeCCCC
Q 010769 279 RNILASASAD--------KQVKIWDVAAGKCNL--TLEHHTDKVQAVAWNHHSPQILLSGSF-D-----RSVVMKDARIS 342 (502)
Q Consensus 279 ~~~l~sgs~D--------g~v~vwd~~~~~~~~--~~~~h~~~v~~l~~~~~~~~~l~s~~~-d-----g~i~vwd~~~~ 342 (502)
+.+++.|+.+ ..+.+||+.+.+-.. .+........++. .++ .+++.|+. + ..+.+||+.+.
T Consensus 99 ~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~ 175 (315)
T 4asc_A 99 NSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMD-LVYVIGGKGSDRKCLNKMCVYDPKKF 175 (315)
T ss_dssp TEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETT-EEEEECCBCTTSCBCCCEEEEETTTT
T ss_pred CEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECC-EEEEEeCCCCCCcccceEEEEeCCCC
Confidence 4566666642 458999998765322 2221111122222 233 67777776 2 46888888764
Q ss_pred CCccce--EeecCCeEEEEeCCCCCCEEEEEeCCC-----eEEEEECCCC
Q 010769 343 THSGFK--WAVAADVESLAWDPHAEHSFVVSLEDG-----TIKGFDIRTA 385 (502)
Q Consensus 343 ~~~~~~--~~~~~~v~~v~~~p~~~~~l~~~~~dg-----~i~i~d~~~~ 385 (502)
+-.... ........++.+ +..+++.|+.++ .+.+||+.+.
T Consensus 176 ~W~~~~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 176 EWKELAPMQTARSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEECCCCSSCCBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred eEEECCCCCCchhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCC
Confidence 311100 000111223333 234677776544 5888888764
No 330
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=95.64 E-value=0.51 Score=43.79 Aligned_cols=185 Identities=10% Similarity=0.092 Sum_probs=88.2
Q ss_pred CcEEEEEec----CC-------cEEEEECCCCeeeEE--eccCCCCeEEEEEcCCCCcEEEEEECC-------CcEEEEe
Q 010769 279 RNILASASA----DK-------QVKIWDVAAGKCNLT--LEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKD 338 (502)
Q Consensus 279 ~~~l~sgs~----Dg-------~v~vwd~~~~~~~~~--~~~h~~~v~~l~~~~~~~~~l~s~~~d-------g~i~vwd 338 (502)
+.+++.|+. ++ .+.+||+.+.+-... +.........+.+ ++ .+++.|+.+ ..+.+||
T Consensus 57 ~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 57 NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPPLPSARCLFGLGEV--DD-KIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSCBSSCBCSCEEEEE--TT-EEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCCCCccccccceEEE--CC-EEEEEcCccCCCCcccceEEEEe
Confidence 457777773 12 277888877654322 2111112222223 34 677777764 2477788
Q ss_pred CCCCCCccceEeec---CCeEEEEeCCCCCCEEEEEeC------CCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 339 ARISTHSGFKWAVA---ADVESLAWDPHAEHSFVVSLE------DGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 339 ~~~~~~~~~~~~~~---~~v~~v~~~p~~~~~l~~~~~------dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
+.+.+-... .... ....++.. +..+++.|+. -..+.+||+.+.. ...+..+...... .+
T Consensus 134 ~~~~~W~~~-~~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~yd~~~~~-------W~~~~~~p~~r~~-~~ 201 (318)
T 2woz_A 134 PVAAKWSEV-KNLPIKVYGHNVISH---NGMIYCLGGKTDDKKCTNRVFIYNPKKGD-------WKDLAPMKTPRSM-FG 201 (318)
T ss_dssp TTTTEEEEE-CCCSSCEESCEEEEE---TTEEEEECCEESSSCBCCCEEEEETTTTE-------EEEECCCSSCCBS-CE
T ss_pred CCCCCEeEC-CCCCCcccccEEEEE---CCEEEEEcCCCCCCCccceEEEEcCCCCE-------EEECCCCCCCccc-ce
Confidence 775431110 0001 11122222 2346666653 2358899987642 0111111111111 12
Q ss_pred EEEcCCCCCEEEEEeCC-----CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCC-------------
Q 010769 410 ISYNPLVPNLLATGSTD-----KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSK------------- 471 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~d-----g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~d------------- 471 (502)
++.. ++ .+++.|+.+ ..+.+||+.+.+...+............+.+ ++. +++.||.+
T Consensus 202 ~~~~-~~-~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-i~v~GG~~~~~~~~~~~~~~~ 276 (318)
T 2woz_A 202 VAIH-KG-KIVIAGGVTEDGLSASVEAFDLKTNKWEVMTEFPQERSSISLVSL--AGS-LYAIGGFAMIQLESKEFAPTE 276 (318)
T ss_dssp EEEE-TT-EEEEEEEEETTEEEEEEEEEETTTCCEEECCCCSSCCBSCEEEEE--TTE-EEEECCBCCBC----CCBCCB
T ss_pred EEEE-CC-EEEEEcCcCCCCccceEEEEECCCCeEEECCCCCCcccceEEEEE--CCE-EEEECCeeccCCCCceeccce
Confidence 2222 23 677777653 3477899988775443332222222222222 344 67777754
Q ss_pred -CcEEEEECCCCc
Q 010769 472 -GKLEIWDTLSDA 483 (502)
Q Consensus 472 -g~i~vwd~~~~~ 483 (502)
..+.+||+.+.+
T Consensus 277 ~~~v~~yd~~~~~ 289 (318)
T 2woz_A 277 VNDIWKYEDDKKE 289 (318)
T ss_dssp CCCEEEEETTTTE
T ss_pred eeeEEEEeCCCCE
Confidence 358889987643
No 331
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.49 E-value=3.1 Score=43.87 Aligned_cols=185 Identities=11% Similarity=0.187 Sum_probs=102.4
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEec-----cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE-----HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS 342 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~-----~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~ 342 (502)
.|.++.. .+ + .|..|+.+ -|..++..+++... +. .....|.++....++ .+. .|+.. -|..++..+.
T Consensus 104 ~i~~i~~-~~-g-~lWigt~~-Gl~~~~~~~~~~~~-~~~~~~~l~~~~i~~i~~d~~g-~lW-igt~~-Gl~~~~~~~~ 175 (758)
T 3ott_A 104 DVRTMAL-QG-D-TLWLGALN-GLYTYQLQSRKLTS-FDTRRNGLPNNTIYSIIRTKDN-QIY-VGTYN-GLCRYIPSNG 175 (758)
T ss_dssp CEEEEEE-ET-T-EEEEEETT-EEEEEETTTCCEEE-ECHHHHCCSCSCEEEEEECTTC-CEE-EEETT-EEEEEETTTT
T ss_pred eEEEEEe-cC-C-cEEEEcCC-cceeEeCCCCeEEE-eccCCCCcCCCeEEEEEEcCCC-CEE-EEeCC-CHhhCccCCC
Confidence 4666654 33 3 45556655 58889987665432 21 123568888887777 444 45554 4777887654
Q ss_pred CCccceEe-----ecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCC
Q 010769 343 THSGFKWA-----VAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVP 417 (502)
Q Consensus 343 ~~~~~~~~-----~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~ 417 (502)
........ ....|.++...+.+. .+.+|+. +-|..++..+... .....+ ....|.++...+++
T Consensus 176 ~~~~~~~~~~~~~~~~~i~~i~~d~~~~-~lWigt~-~Gl~~~~~~~~~~-------~~~~~l--~~~~i~~i~~d~~g- 243 (758)
T 3ott_A 176 KFEGIPLPVHSSQSNLFVNSLLEDTTRQ-CVWIGTE-GYLFQYFPSTGQI-------KQTEAF--HNNSIKSLALDGNG- 243 (758)
T ss_dssp EEEEECCCCCTTCSSCCEEEEEEETTTT-EEEEEEE-EEEEEEETTTTEE-------EEEEEE--EEEEEEEEEECTTC-
T ss_pred ceEEecCCCccccccceeEEEEEECCCC-EEEEEEC-CCCeEEcCCCCeE-------EeccCC--CCCeEEEEEEcCCC-
Confidence 32211111 112377887776544 4566664 4588888765410 111111 23457888877766
Q ss_pred CEEEEEeCCCcEEEEECCCCCeeEEEEec-----CCCCCEEEEEEcCCCCcEEEEEeCCCcEEEE
Q 010769 418 NLLATGSTDKMVKLWDLSNNQPSCIASRN-----PKAGAVFSVAFSEDSPFVLAIGGSKGKLEIW 477 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~~~~~~~~~~~-----~~~~~v~~~~~spd~~~llasg~~dg~i~vw 477 (502)
. |..|+.. -+.+++..+.+........ .....|.++....+|. |-.|+..| +.++
T Consensus 244 ~-lWigT~~-Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~--lWiGT~~G-l~~~ 303 (758)
T 3ott_A 244 D-LLAGTDN-GLYVYHNDTTPLQHIIHDSRNIQSLTNNIIWNIFADQEHN--IWLGTDYG-ISLS 303 (758)
T ss_dssp C-EEEEETT-EEEEECCTTSCCEEECCCTTCTTSCSCSCEEEEEECTTCC--EEEEESSS-EEEE
T ss_pred C-EEEEeCC-ceeEEecCCCcEEEEEcCCCCcCcCCcCeEEEEEEcCCCC--EEEEeCCc-cccc
Confidence 3 3344444 5888888766532221111 1234589999888887 33445555 4443
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.19 E-value=3.8 Score=43.15 Aligned_cols=190 Identities=10% Similarity=0.085 Sum_probs=109.5
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..|.++.-..+ + .|..|+.+| +..||..+.+...........|.++.. .++ .|..++.+ .|..++..+.....
T Consensus 63 ~~i~~i~~d~~-g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g--~lWigt~~-Gl~~~~~~~~~~~~ 135 (758)
T 3ott_A 63 TRIYCGVIIDN-T-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD--TLWLGALN-GLYTYQLQSRKLTS 135 (758)
T ss_dssp SCEEEEEEETT-T-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT--EEEEEETT-EEEEEETTTCCEEE
T ss_pred ceEEEEEEcCC-C-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC--cEEEEcCC-cceeEeCCCCeEEE
Confidence 56888877666 3 566666655 889998876543211112335777654 344 45556655 57888876644321
Q ss_pred ceE----eecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe--c----CCCCeeEEEEcCCC
Q 010769 347 FKW----AVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--A----HDKAVCTISYNPLV 416 (502)
Q Consensus 347 ~~~----~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--~----h~~~v~~l~~sp~~ 416 (502)
... .....|.++....++. +.+|+.. -|..|+..+.. ...+. . ....|.++...+.+
T Consensus 136 ~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~----------~~~~~~~~~~~~~~~~i~~i~~d~~~ 202 (758)
T 3ott_A 136 FDTRRNGLPNNTIYSIIRTKDNQ--IYVGTYN-GLCRYIPSNGK----------FEGIPLPVHSSQSNLFVNSLLEDTTR 202 (758)
T ss_dssp ECHHHHCCSCSCEEEEEECTTCC--EEEEETT-EEEEEETTTTE----------EEEECCCCCTTCSSCCEEEEEEETTT
T ss_pred eccCCCCcCCCeEEEEEEcCCCC--EEEEeCC-CHhhCccCCCc----------eEEecCCCccccccceeEEEEEECCC
Confidence 100 1124577888777554 5556654 47778876541 11111 1 12247888777665
Q ss_pred CCEEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCc
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDA 483 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~ 483 (502)
..|..|+. +-+..++..+.+........ ...|.++...+++. |-.|+. +-|.+++..++.
T Consensus 203 -~~lWigt~-~Gl~~~~~~~~~~~~~~~l~--~~~i~~i~~d~~g~--lWigT~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 203 -QCVWIGTE-GYLFQYFPSTGQIKQTEAFH--NNSIKSLALDGNGD--LLAGTD-NGLYVYHNDTTP 262 (758)
T ss_dssp -TEEEEEEE-EEEEEEETTTTEEEEEEEEE--EEEEEEEEECTTCC--EEEEET-TEEEEECCTTSC
T ss_pred -CEEEEEEC-CCCeEEcCCCCeEEeccCCC--CCeEEEEEEcCCCC--EEEEeC-CceeEEecCCCc
Confidence 44444443 45888998776533222221 24588898888887 333454 458888876654
No 333
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=95.19 E-value=0.79 Score=43.24 Aligned_cols=60 Identities=13% Similarity=0.037 Sum_probs=27.9
Q ss_pred eEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC------cEEEEECCCCCeeEEEEe
Q 010769 376 TIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK------MVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 376 ~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg------~i~vwd~~~~~~~~~~~~ 445 (502)
.+.+||+.+.. ...+..+......-.++.+ ++ .+++.|+.++ .|.++++.+++.......
T Consensus 286 ~~~~yd~~~~~-------W~~~~~~p~~r~~~~~~~~--~~-~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGK-------WDKSGELSQGRAYGVSLPW--NN-SLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC----------CEEEEECSSCCBSSEEEEE--TT-EEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCc-------eeeCCCCCCCcccceeEEe--CC-EEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 47788887642 1222222222222222322 33 7788888643 356668888775443333
No 334
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=94.67 E-value=0.53 Score=49.21 Aligned_cols=193 Identities=9% Similarity=0.122 Sum_probs=97.1
Q ss_pred CcEEEEEecC----CcEEEEECCCCeeeEEe-c------cCCCCeEEEEEcC-CCCcEEEEEECCC------cEEEEeCC
Q 010769 279 RNILASASAD----KQVKIWDVAAGKCNLTL-E------HHTDKVQAVAWNH-HSPQILLSGSFDR------SVVMKDAR 340 (502)
Q Consensus 279 ~~~l~sgs~D----g~v~vwd~~~~~~~~~~-~------~h~~~v~~l~~~~-~~~~~l~s~~~dg------~i~vwd~~ 340 (502)
+.+++.|+.+ ..+.+||+.+++....- . .....-.+++..+ ++ .+++.|+.++ .+.+||+.
T Consensus 398 ~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~-~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 398 NDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNN-QLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTT-EEEEECCBSSTTCBCCCCEEEETT
T ss_pred CEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCC-EEEEEcCCCCCCCccccEEEEeCC
Confidence 4477777653 46889998877543222 1 1111112333333 45 7788877543 47788887
Q ss_pred CCCCccc--eEeecCCeEEEEeCCCCCCEEEEEeCCC--eEEEEECCCCCCCCCCCCCCccEE---EecCCCCeeEEEEc
Q 010769 341 ISTHSGF--KWAVAADVESLAWDPHAEHSFVVSLEDG--TIKGFDIRTAKSDPDSTSQQSSFT---LHAHDKAVCTISYN 413 (502)
Q Consensus 341 ~~~~~~~--~~~~~~~v~~v~~~p~~~~~l~~~~~dg--~i~i~d~~~~~~~~~~~~~~~~~~---~~~h~~~v~~l~~s 413 (502)
+..-... .........++.+. + ..+++.|+.++ .+.+||..+..- ..+.. +......-.++.+.
T Consensus 477 t~~W~~~~~~p~~R~~h~~~~~~-~-~~iyv~GG~~~~~~v~~yd~~t~~W-------~~~~~~g~~p~~r~~~~a~v~~ 547 (695)
T 2zwa_A 477 TREWSMIKSLSHTRFRHSACSLP-D-GNVLILGGVTEGPAMLLYNVTEEIF-------KDVTPKDEFFQNSLVSAGLEFD 547 (695)
T ss_dssp TTEEEECCCCSBCCBSCEEEECT-T-SCEEEECCBCSSCSEEEEETTTTEE-------EECCCSSGGGGSCCBSCEEEEE
T ss_pred CCcEEECCCCCCCcccceEEEEc-C-CEEEEECCCCCCCCEEEEECCCCce-------EEccCCCCCCCcccceeEEEEe
Confidence 6421110 00011112223322 3 44777776554 689999886520 11100 11111222335555
Q ss_pred CCCCCEEEEEeC--C-----CcEEEEECCCCC------eeEEEEec-CCCCCEEEEEEcCCCCcEEEEEeC--------C
Q 010769 414 PLVPNLLATGST--D-----KMVKLWDLSNNQ------PSCIASRN-PKAGAVFSVAFSEDSPFVLAIGGS--------K 471 (502)
Q Consensus 414 p~~~~~l~t~s~--d-----g~i~vwd~~~~~------~~~~~~~~-~~~~~v~~~~~spd~~~llasg~~--------d 471 (502)
.....+++.|+. + +.+.+||+.+.. ...+.... ...... ++....++. +++.||. .
T Consensus 548 ~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~-~~~~~~~~~-iyv~GG~~~~~~~~~~ 625 (695)
T 2zwa_A 548 PVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGS-QIKYITPRK-LLIVGGTSPSGLFDRT 625 (695)
T ss_dssp TTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSC-EEEEEETTE-EEEECCBCSSCCCCTT
T ss_pred CCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccc-eEEEeCCCE-EEEECCccCCCCCCCC
Confidence 542367777765 2 358899998877 33333311 111112 222333344 6777874 3
Q ss_pred CcEEEEECCCCc
Q 010769 472 GKLEIWDTLSDA 483 (502)
Q Consensus 472 g~i~vwd~~~~~ 483 (502)
..|.+||+.++.
T Consensus 626 ~~v~~yd~~t~~ 637 (695)
T 2zwa_A 626 NSIISLDPLSET 637 (695)
T ss_dssp TSEEEEETTTTE
T ss_pred CeEEEEECCCCe
Confidence 468999998754
No 335
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.37 E-value=0.098 Score=49.16 Aligned_cols=194 Identities=11% Similarity=0.030 Sum_probs=100.4
Q ss_pred cEEEEEecCCcEEEEECCCCeeeEEeccC-CCCeEEEEEc--CCCCcEEEEE-ECCCcEEEEeCCCCCCccceEeecCCe
Q 010769 280 NILASASADKQVKIWDVAAGKCNLTLEHH-TDKVQAVAWN--HHSPQILLSG-SFDRSVVMKDARISTHSGFKWAVAADV 355 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-~~~v~~l~~~--~~~~~~l~s~-~~dg~i~vwd~~~~~~~~~~~~~~~~v 355 (502)
.+++.++.||.|.-.|..+|+.+.++... ..++....-. +.+...++.. +.||.|..++..++... .......-+
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~-~~~~~~~lv 89 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQK-LPLSIRQLV 89 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEE-EEEEHHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEE-eeeccccce
Confidence 47899999999999999999999988653 1233222111 1121333333 58999999998765321 111111111
Q ss_pred --EEEEeC-------C---CCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCC--C-----eeEEEEc---
Q 010769 356 --ESLAWD-------P---HAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDK--A-----VCTISYN--- 413 (502)
Q Consensus 356 --~~v~~~-------p---~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~--~-----v~~l~~s--- 413 (502)
.-+... + .....+++|+.+|.+...|++++ +.++.+..... . ..|....
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG---------~~~W~~~~~~~~~~~~~~~e~~~~~~d~~ 160 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNG---------EIISAFGPGSKNGYFGSQSVDCSPEEKIK 160 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEEEEEETTTC---------CEEEEESTTCBCC----------------
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCC---------cEEEEEecCCCcccccccccccccccccc
Confidence 001110 0 01337899999999999999998 66676653211 0 1111111
Q ss_pred C-CCCCEEEEEeCCCcEEEEECCCCCee--EEEEecCCCC--CE-EEEEEcCCCCcEEEEEeCCCcEEEEECCCCcccc
Q 010769 414 P-LVPNLLATGSTDKMVKLWDLSNNQPS--CIASRNPKAG--AV-FSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAGIS 486 (502)
Q Consensus 414 p-~~~~~l~t~s~dg~i~vwd~~~~~~~--~~~~~~~~~~--~v-~~~~~spd~~~llasg~~dg~i~vwd~~~~~~~~ 486 (502)
. .....|+.+..+..+.+.+ ++++.. .......... .+ .+-..+.++.+ +.++.+|.|.-+|..++..+-
T Consensus 161 ~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~~s~~~~~~~~~~~~~~~~~s~Dg~~--~~~~~dg~v~A~d~~~G~~~W 236 (339)
T 2be1_A 161 LQECENMIVIGKTIFELGIHS-YDGASYNVTYSTWQQNVLDVPLALQNTFSKDGMC--IAPFRDKSLLASDLDFRIARW 236 (339)
T ss_dssp ----CCEEEEEEEEEECEECC-TTSCCCCCEEEEEECCTTTHHHHTTCSSCSSSCC--EEEETTTEEEEECSTTCCEEE
T ss_pred cccCCCeEEEecceEEEEEEC-CCCCeEEEecccccccccccccccccccccCCcE--EEECCCCEEEEEECCCCcEEE
Confidence 0 1124566666666666655 333210 0011111100 00 00001234553 346788888888888777654
No 336
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=94.17 E-value=5.1 Score=39.97 Aligned_cols=261 Identities=9% Similarity=0.099 Sum_probs=135.6
Q ss_pred EEEecCCCcEEEeeCCCCCCCCceeeeCCcchh------hhhhccccCCccccccccCCcccceeeEEec---CCCCcEE
Q 010769 212 MAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEE------KKKKKSKKGKKSSIKYKKGSHTDSVLGLAWN---KEFRNIL 282 (502)
Q Consensus 212 la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~---~~~~~~l 282 (502)
+.+|+..|.|+|+-+.++..+..+.++...+.. ..++..... .....--..| ..+++. -+|+.++
T Consensus 73 f~SgG~sG~v~v~G~PSmR~l~~IpVF~~~~~~G~G~t~esk~il~~~--~~~~~gD~HH----p~~S~tdg~yDGrylf 146 (638)
T 3sbq_A 73 FWSGGHQGEVRVLGVPSMRELMRIPVFNVDSATGWGLTNESRHIMGDS--AKFLNGDCHH----PHISMTDGKYDGKYLF 146 (638)
T ss_dssp EEECGGGCCEEEEEETTTEEEEEECSSSCCTTTCTTTBHHHHHHHGGG--GGCCCCCCCC----CEEEEETTEEEEEEEE
T ss_pred EeecCcCceEEEEecCCcceEEEeecccCCCCcccCCchhHHHHHhcC--CCccCCCcCC----CcccccCCeeeeEEEE
Confidence 678999999999999988877766665543221 011000000 0000000111 123332 1333334
Q ss_pred EEEecCCcEEEEECCCCeeeEEec-cCCCCeEEEEEc--CCCCcEEEEEEC-------CCcE---------EE---EeCC
Q 010769 283 ASASADKQVKIWDVAAGKCNLTLE-HHTDKVQAVAWN--HHSPQILLSGSF-------DRSV---------VM---KDAR 340 (502)
Q Consensus 283 ~sgs~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~l~~~--~~~~~~l~s~~~-------dg~i---------~v---wd~~ 340 (502)
+-.-....|-..++...++-..+. .....+..++|- |.. .++++++. ||.. .+ .|..
T Consensus 147 iNdkan~RvAri~l~~~~~d~Ii~iPn~~~~Hg~~~~~~p~T-~yv~~~~e~~~P~pndg~~~~~~~~~~y~~f~~iD~~ 225 (638)
T 3sbq_A 147 INDKANSRVARIRLDIMKCDKMITVPNVQAIHGLRLQKVPHT-KYVFANAEFIIPHPNDGKVFDLQDENSYTMYNAIDAE 225 (638)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTCSCEEEEEECCSSBC-CEEEEEECSCEESSCSSSCCCTTSTTEEEEEEEEETT
T ss_pred EecCCCcceEEEECCcEeeceeEeCCCCcCcccccccccCCc-cEEEecceeeccCCCCCcccccCChhhceEEEEEcCC
Confidence 444466778888888887765553 245677888886 454 56666654 2221 11 1111
Q ss_pred CCCCccceEeecCCeEEEEeCCCCCCEEEEEeCC--------------CeEEEEECCCC-------CCCCCC--------
Q 010769 341 ISTHSGFKWAVAADVESLAWDPHAEHSFVVSLED--------------GTIKGFDIRTA-------KSDPDS-------- 391 (502)
Q Consensus 341 ~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d--------------g~i~i~d~~~~-------~~~~~~-------- 391 (502)
+.+ +.......+....+...+++...|.++... ..+.++++... ......
T Consensus 226 tm~-v~~Qv~v~gnld~~~~~~~g~~af~t~yNsE~~~~l~em~~~e~D~~~vfn~~~ie~~vk~G~~~~~~g~gv~ViD 304 (638)
T 3sbq_A 226 TME-MAFQVIVDGNLDNTDADYTGRFAAATCYNSEKAFDLGGMMRNERDWVVVFDIHAVEAAVKAGDFITLGDSKTPVLD 304 (638)
T ss_dssp TCS-EEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCSSCEEEEEEEHHHHHHHHHTTCCBCCTTCCCCEEE
T ss_pred ccE-EEEEEEcCCChhhcCCCCCCCEEEEeeeccccCcChhhcCcccccEEEEecHHHHHHHHhcCCeEEECCCCeeEEc
Confidence 111 111112233344445566665444443211 12444443210 000000
Q ss_pred -CC----CCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCC-----------CeeEEEEecCCCCCEEEE
Q 010769 392 -TS----QQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNN-----------QPSCIASRNPKAGAVFSV 455 (502)
Q Consensus 392 -~~----~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~-----------~~~~~~~~~~~~~~v~~~ 455 (502)
.. ...+..+..-.....++.++|+|..++++|-.+.++.|+|+... +-......... -.....
T Consensus 305 ~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~G-lGPlHt 383 (638)
T 3sbq_A 305 GRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELG-LGPLHT 383 (638)
T ss_dssp CSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCC-SCEEEE
T ss_pred cccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCC-CcccEE
Confidence 00 01122222233456788999999556666667999999998741 11123333333 346778
Q ss_pred EEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 456 AFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 456 ~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
+|.++|. ...+---|..|.-|++...
T Consensus 384 ~Fd~~G~-aYTtlfidSqvvkWni~~a 409 (638)
T 3sbq_A 384 TFDGRGN-AYTTLFIDSQVVKWNMEEA 409 (638)
T ss_dssp EECSSSE-EEEEETTTTEEEEEEHHHH
T ss_pred EECCCCc-eEeeeeecceEEEEeccHH
Confidence 9999994 6777778999999999653
No 337
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.89 E-value=4.1 Score=39.96 Aligned_cols=110 Identities=12% Similarity=0.187 Sum_probs=58.3
Q ss_pred CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccceEe---------ecCCeEEEEeCCC---CCCEEEEEeC----
Q 010769 310 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFKWA---------VAADVESLAWDPH---AEHSFVVSLE---- 373 (502)
Q Consensus 310 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~---------~~~~v~~v~~~p~---~~~~l~~~~~---- 373 (502)
.....|+|.|+| +++++-...+.|++++...+.... ... ....+..|+|+|+ +..++++-+.
T Consensus 27 ~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 27 NKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 456799999999 666554433468888765433211 111 1345678999995 4433333322
Q ss_pred --------CCeEEEEECCCCCCCCCCCCCCccEE-Eec-CCCCeeEEEEcCCCCCEEEEEe
Q 010769 374 --------DGTIKGFDIRTAKSDPDSTSQQSSFT-LHA-HDKAVCTISYNPLVPNLLATGS 424 (502)
Q Consensus 374 --------dg~i~i~d~~~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~t~s 424 (502)
...|.-|+........ ...+.+.. +.. .......|+|.|+| .+.++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~--~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTL--EKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEE--EEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCc--CCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEEC
Confidence 2356666654321000 00112221 221 12347899999998 5555544
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=93.82 E-value=1.3 Score=40.92 Aligned_cols=182 Identities=13% Similarity=0.138 Sum_probs=86.5
Q ss_pred EEEEEecCCcEEEEECCCCeeeE-EeccCCCCeEEEEEcCCCCcEEEEEEC----CC-------cEEEEeCCCCCCccc-
Q 010769 281 ILASASADKQVKIWDVAAGKCNL-TLEHHTDKVQAVAWNHHSPQILLSGSF----DR-------SVVMKDARISTHSGF- 347 (502)
Q Consensus 281 ~l~sgs~Dg~v~vwd~~~~~~~~-~~~~h~~~v~~l~~~~~~~~~l~s~~~----dg-------~i~vwd~~~~~~~~~- 347 (502)
+++.|+. .+.+||..+++-.. .+..............++ .+++.|+. ++ .+.+||..+.+-...
T Consensus 18 i~~~GG~--~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~ 94 (318)
T 2woz_A 18 ILLVNDT--AAVAYDPMENECYLTALAEQIPRNHSSIVTQQN-QVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP 94 (318)
T ss_dssp EEEECSS--EEEEEETTTTEEEEEEECTTSCSSEEEEECSSS-CEEEEESSCC-------CCCBEEEEEETTTTEEEECS
T ss_pred hhhcccc--ceEEECCCCCceecccCCccCCccceEEEEECC-EEEEECCcccCccccCCCccccEEEEeCCCCcEEECC
Confidence 4444543 48899998876543 122111112222223344 77888873 12 167788765431110
Q ss_pred -eEeecCCeEEEEeCCCCCCEEEEEeCC-------CeEEEEECCCCCCCCCCCCCCccEEEecCCCC--eeEEEEcCCCC
Q 010769 348 -KWAVAADVESLAWDPHAEHSFVVSLED-------GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKA--VCTISYNPLVP 417 (502)
Q Consensus 348 -~~~~~~~v~~v~~~p~~~~~l~~~~~d-------g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~--v~~l~~sp~~~ 417 (502)
..........+.+ +..+++.|+.+ ..+.+||..+.. ...+.....+ -.+++. .++
T Consensus 95 ~~p~~r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~----------W~~~~~~p~~r~~~~~~~-~~~- 159 (318)
T 2woz_A 95 PLPSARCLFGLGEV---DDKIYVVAGKDLQTEASLDSVLCYDPVAAK----------WSEVKNLPIKVYGHNVIS-HNG- 159 (318)
T ss_dssp CBSSCBCSCEEEEE---TTEEEEEEEEBTTTCCEEEEEEEEETTTTE----------EEEECCCSSCEESCEEEE-ETT-
T ss_pred CCCccccccceEEE---CCEEEEEcCccCCCCcccceEEEEeCCCCC----------EeECCCCCCcccccEEEE-ECC-
Confidence 0000111222333 23466666643 247888887642 1111111111 011222 233
Q ss_pred CEEEEEeC------CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC-----cEEEEECCCCc
Q 010769 418 NLLATGST------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-----KLEIWDTLSDA 483 (502)
Q Consensus 418 ~~l~t~s~------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg-----~i~vwd~~~~~ 483 (502)
.+++.|+. -..+.+||+.+.+...+............+.+ ++. +++.||.++ .+.+||+.+.+
T Consensus 160 ~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 160 MIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp EEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCC
T ss_pred EEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCE-EEEEcCcCCCCccceEEEEECCCCe
Confidence 66666664 23589999998865444322222221222222 344 677777543 47789987654
No 339
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=93.59 E-value=0.76 Score=39.93 Aligned_cols=103 Identities=5% Similarity=-0.004 Sum_probs=59.9
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCee------eEEe-c-cCCCCeEEEEEcCCCCcEEEEEECCCcEEEEe
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC------NLTL-E-HHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~------~~~~-~-~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 338 (502)
..+.+|+|+|+ +.+. +. .+|.+.-.+..+... -..+ . +... ..++.|.|++ .+.++ .||.|+-++
T Consensus 41 ~~~~~laf~P~-G~LY-aV-~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G-~LYav--~dG~iyr~~ 113 (236)
T 1tl2_A 41 SNFKFLFLSPG-GELY-GV-LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNG-YLYAV--SKDKLYKAS 113 (236)
T ss_dssp TTCSEEEECTT-SCEE-EE-ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTS-CEEEE--ETTEEEEES
T ss_pred ccceeEEECCC-ccEE-EE-eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCC-CEEEe--CCCEEEEeC
Confidence 36779999997 4344 44 677766666544221 1111 0 1111 4788999998 55554 569888777
Q ss_pred CCCCCCccce---Ee-ec---CCeEEEEeCCCCCCEEEEEeCCCeEEE
Q 010769 339 ARISTHSGFK---WA-VA---ADVESLAWDPHAEHSFVVSLEDGTIKG 379 (502)
Q Consensus 339 ~~~~~~~~~~---~~-~~---~~v~~v~~~p~~~~~l~~~~~dg~i~i 379 (502)
-.+....... .. .. ..+..|.+.|++. |++.. ++.++-
T Consensus 114 pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~--Lyav~-dg~lyr 158 (236)
T 1tl2_A 114 PPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGY--LYAVH-GQQFYK 158 (236)
T ss_dssp CCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSC--EEEEE-TTEEEE
T ss_pred CCcCCCCceeccccEeccCCCCceEEEEECCCce--EEEEe-CCcEEe
Confidence 5432222110 01 11 3689999999874 55555 887543
No 340
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=93.56 E-value=4.8 Score=37.61 Aligned_cols=103 Identities=6% Similarity=0.071 Sum_probs=55.9
Q ss_pred cEEEEEecCCcEEEEECCCCeeeEEeccCC--CC-----eEEEEEc---C-CCCcEEEEEECCCcEEEEeCCCCCCccce
Q 010769 280 NILASASADKQVKIWDVAAGKCNLTLEHHT--DK-----VQAVAWN---H-HSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~--~~-----v~~l~~~---~-~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 348 (502)
..+++|+.+|++...|+.+|+.+..+.... .. ..|.... . .....++.+..+..+.+.+ +++..-...
T Consensus 112 g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~~v~ig~~~y~v~~~~-~sG~~W~~~ 190 (339)
T 2be1_A 112 EKVYTGSMRTIMYTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECENMIVIGKTIFELGIHS-YDGASYNVT 190 (339)
T ss_dssp EEEEECEEEEEEEEEETTTCCEEEEESTTCBCC--------------------CCEEEEEEEEEECEECC-TTSCCCCCE
T ss_pred CEEEEEecCCEEEEEECCCCcEEEEEecCCCcccccccccccccccccccccCCCeEEEecceEEEEEEC-CCCCeEEEe
Confidence 478999999999999999999999886321 10 1111111 0 1114677777777777766 333211100
Q ss_pred Ee-ecCC-eE-----EEEeCCCCCCEEEEEeCCCeEEEEECCCC
Q 010769 349 WA-VAAD-VE-----SLAWDPHAEHSFVVSLEDGTIKGFDIRTA 385 (502)
Q Consensus 349 ~~-~~~~-v~-----~v~~~p~~~~~l~~~~~dg~i~i~d~~~~ 385 (502)
.. .... +. +-..+.++ .+++++.+|.|..+|..++
T Consensus 191 ~s~~~~~~~~~~~~~~~~~s~Dg--~~~~~~~dg~v~A~d~~~G 232 (339)
T 2be1_A 191 YSTWQQNVLDVPLALQNTFSKDG--MCIAPFRDKSLLASDLDFR 232 (339)
T ss_dssp EEEEECCTTTHHHHTTCSSCSSS--CCEEEETTTEEEEECSTTC
T ss_pred cccccccccccccccccccccCC--cEEEECCCCEEEEEECCCC
Confidence 00 0000 00 00001122 3356788999999998876
No 341
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.56 E-value=4.4 Score=37.20 Aligned_cols=174 Identities=7% Similarity=-0.006 Sum_probs=86.1
Q ss_pred EecCCCCcEEEEEe----cCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccce
Q 010769 273 AWNKEFRNILASAS----ADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGFK 348 (502)
Q Consensus 273 ~~~~~~~~~l~sgs----~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~ 348 (502)
.|++.+. .|+-.. ....|...++.... ...+..+.. ..|++.+..++.+......|.+.++....... .
T Consensus 110 ~~s~~g~-~Iy~~~~~~~~~~~Iy~~~~dGs~-~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~-l 182 (302)
T 3s25_A 110 YASLIGN-YIYYLHYDTQTATSLYRIRIDGEE-KKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL-F 182 (302)
T ss_dssp EEEEETT-EEEEEEESSSSCEEEEEEETTSCC-CEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE-E
T ss_pred EEEEeCC-EEEEEeecCCCCceEEEEECCCCC-eEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE-E
Confidence 5677744 555444 33455555655333 334433332 34566774545454446778887776544322 1
Q ss_pred EeecCCeEEEEeCCCCCCEEEEEeCC-CeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEe--C
Q 010769 349 WAVAADVESLAWDPHAEHSFVVSLED-GTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGS--T 425 (502)
Q Consensus 349 ~~~~~~v~~v~~~p~~~~~l~~~~~d-g~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s--~ 425 (502)
..+... ..++|.+..++.+...+ ..|..-++... ....+. ...+ ..|+|.+ .+|+-++ .
T Consensus 183 --~~~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~----------~~~~Lt--~~~~--~~~~~~g-~~Iy~~~~~~ 244 (302)
T 3s25_A 183 --YDCNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP----------NPVVLT--EANI--EHYNVYG-SLIFYQRGGD 244 (302)
T ss_dssp --ECSCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC----------CCEECS--CSCE--EEEEEET-TEEEEEECSS
T ss_pred --eCCCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC----------CeEEEe--CCCc--ceEEECC-CEEEEEECCC
Confidence 122222 33558777555554433 35666665543 122222 2233 3367777 5555442 3
Q ss_pred CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEE
Q 010769 426 DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWD 478 (502)
Q Consensus 426 dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd 478 (502)
.+.|..-++.......+.. . .+.. +++.+.++..+--..+.|..-+
T Consensus 245 ~~~i~~~~~DG~~r~~l~~--~---~~~~--i~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 245 NPALCVVKNDGTGFKELAK--G---EFCN--INVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp SCEEEEEETTSCCCEEEEE--S---CEEE--EEECSSEEEEEETTTCCEEEEE
T ss_pred CcEEEEEECCCCccEEeeC--C---ccce--EEEeCCEEEEEECCCCeEEEEE
Confidence 4567777776554323322 1 2333 3445555555554455554444
No 342
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.47 E-value=6.2 Score=38.63 Aligned_cols=58 Identities=12% Similarity=0.078 Sum_probs=32.1
Q ss_pred CEEEEEeCCCcEEEEECCC-CC-ee-EEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEE
Q 010769 418 NLLATGSTDKMVKLWDLSN-NQ-PS-CIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLE 475 (502)
Q Consensus 418 ~~l~t~s~dg~i~vwd~~~-~~-~~-~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~ 475 (502)
.+|+..-..+.|....+.. +. .. ....+....+.+..|++.|||..|+++....|.|.
T Consensus 370 ~lfv~~~~~~~i~~v~l~~~g~~~~~~~~~~~~~~~R~~dv~~gpDG~~Lyv~~d~~G~i~ 430 (454)
T 1cru_A 370 TLLVPSLKRGVIFRIKLDPTYSTTYDDAVPMFKSNNRYRDVIASPDGNVLYVLTDTAGNVQ 430 (454)
T ss_dssp EEEEEBSSSCCEEEEEECTTSSSEEEEEEEESCCSSCEEEEEECTTSSCEEEEECSSCCEE
T ss_pred cEEEeecCCCEEEEEEECCCCCeeeeeeeeecccCCCceeEEECCCCCEEEEEECCCCCCc
Confidence 3444444456677777664 22 11 11122223468999999999973344444556544
No 343
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.21 E-value=2.9 Score=43.55 Aligned_cols=105 Identities=9% Similarity=0.027 Sum_probs=57.4
Q ss_pred CcEEEEEecCC--cEEEEECCCCeeeEE-----eccCCCCeEEEEEcCCCCcEEEEEECC-------CcEEEEeCCCCCC
Q 010769 279 RNILASASADK--QVKIWDVAAGKCNLT-----LEHHTDKVQAVAWNHHSPQILLSGSFD-------RSVVMKDARISTH 344 (502)
Q Consensus 279 ~~~l~sgs~Dg--~v~vwd~~~~~~~~~-----~~~h~~~v~~l~~~~~~~~~l~s~~~d-------g~i~vwd~~~~~~ 344 (502)
+.+++.|+.++ .+.+||+.+.+-... +........++.+......+++.|+.+ ..+.+||+.+..-
T Consensus 501 ~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w 580 (695)
T 2zwa_A 501 GNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENA 580 (695)
T ss_dssp SCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCS
T ss_pred CEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCcc
Confidence 45777787655 699999988754322 111222233455565523778888762 3588899887661
Q ss_pred -ccceE----ee--c--CCeEEEEeCCCCCCEEEEEeC--------CCeEEEEECCCC
Q 010769 345 -SGFKW----AV--A--ADVESLAWDPHAEHSFVVSLE--------DGTIKGFDIRTA 385 (502)
Q Consensus 345 -~~~~~----~~--~--~~v~~v~~~p~~~~~l~~~~~--------dg~i~i~d~~~~ 385 (502)
....| .. . ....++.+. + ..+++.|+. ...|.+||+.+.
T Consensus 581 ~~~~~W~~~~~~p~~~R~~~~~~~~~-~-~~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 581 TEPITVIKKLQHPLFQRYGSQIKYIT-P-RKLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp SCCEEEEEEEECGGGCCBSCEEEEEE-T-TEEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred ccceEEEEcCCCCCCCcccceEEEeC-C-CEEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 00011 10 1 112233332 1 346666663 345888998765
No 344
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=93.06 E-value=6 Score=37.25 Aligned_cols=209 Identities=11% Similarity=0.038 Sum_probs=106.1
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCe-eeEEec---cCCCCeEEEEEcCC---CCcEEEEEEC---C----C
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGK-CNLTLE---HHTDKVQAVAWNHH---SPQILLSGSF---D----R 332 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~-~~~~~~---~h~~~v~~l~~~~~---~~~~l~s~~~---d----g 332 (502)
.....|+|.|++ . |+.+...|.|++++ ..++ .+..+. ........|+++|+ +..++++-+. + +
T Consensus 29 ~~P~~ia~~pdG-~-l~V~e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLGGG-R-YLVTERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEETT-E-EEEEETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcCCC-e-EEEEeCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 346889999994 3 55556679999997 4454 222221 12356889999997 4355554442 3 5
Q ss_pred cEEEEeCCCCC--C--ccce-Eee----cCCeEEEEeCCCCCCEEEEEeC-------------CCeEEEEECCCCCCCCC
Q 010769 333 SVVMKDARIST--H--SGFK-WAV----AADVESLAWDPHAEHSFVVSLE-------------DGTIKGFDIRTAKSDPD 390 (502)
Q Consensus 333 ~i~vwd~~~~~--~--~~~~-~~~----~~~v~~v~~~p~~~~~l~~~~~-------------dg~i~i~d~~~~~~~~~ 390 (502)
.|..|+..... . .... ... ......++|.|++. ++++.+. .|.|..++........+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~-Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM-LYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC-EEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc-EEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 67777765431 1 0111 111 12346799999875 4444222 24566665542210000
Q ss_pred CCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC---cEEEEECCC--------C------CeeEEEEecCCCCCEE
Q 010769 391 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK---MVKLWDLSN--------N------QPSCIASRNPKAGAVF 453 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg---~i~vwd~~~--------~------~~~~~~~~~~~~~~v~ 453 (502)
+.....++ ..+| .....++|+|....++++-.... .|.+..... + ....+...........
T Consensus 185 pf~~~~i~-a~G~-rnp~Gla~d~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~~~~~ap~ 262 (354)
T 3a9g_A 185 PFPNSPIW-SYGH-RNPQGIDWHRASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTGSETWAPS 262 (354)
T ss_dssp SSTTCCEE-EECC-SCCCEEEECTTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECTTCCCCEE
T ss_pred CCCCCcEE-EEcc-CCcceEEEeCCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecCCCCcCCc
Confidence 00001122 1233 33578999994326555533322 133322111 0 0011223211224577
Q ss_pred EEEEc-------CCCCcEEEEEeCCCcEEEEECCCC
Q 010769 454 SVAFS-------EDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 454 ~~~~s-------pd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.++|. .++. ++++.-..+.|...++...
T Consensus 263 G~~~y~g~~fp~~~G~-l~v~~~~~~~v~~~~~~~~ 297 (354)
T 3a9g_A 263 GASFVHGDMFPGLRGW-LLIACLRGSMLAAVNFGDN 297 (354)
T ss_dssp EEEECCSSSCGGGTTE-EEEEETTTTEEEEEEECGG
T ss_pred ceEEECCCCCcccCCc-EEEEEcCCCEEEEEEECCC
Confidence 88884 4565 5666556678888888753
No 345
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.34 E-value=10 Score=36.08 Aligned_cols=181 Identities=12% Similarity=0.066 Sum_probs=85.7
Q ss_pred cceeeEEecCCCCcEEEEEecCC----cEEEEECCCCeeeEEec------c--------CCCCeEEEEEcCCC-CcEEEE
Q 010769 267 DSVLGLAWNKEFRNILASASADK----QVKIWDVAAGKCNLTLE------H--------HTDKVQAVAWNHHS-PQILLS 327 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg----~v~vwd~~~~~~~~~~~------~--------h~~~v~~l~~~~~~-~~~l~s 327 (502)
..|.+|++.|.....|..+...| .|...+ ..++.-..+. . ....|.+|++.|.+ +..|.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56999999983233455555554 344332 2232211111 0 11257789998743 355666
Q ss_pred EECCCcEEEEeCCCCC--Cccce----------------EeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCC
Q 010769 328 GSFDRSVVMKDARIST--HSGFK----------------WAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDP 389 (502)
Q Consensus 328 ~~~dg~i~vwd~~~~~--~~~~~----------------~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~ 389 (502)
++..+.|...+-.... ..... ......+.+|.++|..+..+++++..+.|...+-. +
T Consensus 134 g~~~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~Dg-G---- 208 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTDA-G---- 208 (394)
T ss_dssp EEETTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEESST-T----
T ss_pred EecCCcEEEEcCCCCCeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEECCC-C----
Confidence 6656655544322111 11000 00123478899998544456666555544443211 1
Q ss_pred CCCCCCccEEEec-------------CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEecCCC---CCEE
Q 010769 390 DSTSQQSSFTLHA-------------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASRNPKA---GAVF 453 (502)
Q Consensus 390 ~~~~~~~~~~~~~-------------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~---~~v~ 453 (502)
.....+.. ....+.+|.+.|..+..|..++..+ |...+-.......+ ...... ..+.
T Consensus 209 -----~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~G~tW~~~-~~~l~~~~~~~~~ 281 (394)
T 3b7f_A 209 -----TDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRREGVWKRI-GDAMPREVGDIGF 281 (394)
T ss_dssp -----SSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETTTTEEECG-GGGSCTTTCSCEE
T ss_pred -----CCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCCCCcceEC-CCCCCCCCccceE
Confidence 11111100 0134888999997556777776554 44443222211111 100111 3467
Q ss_pred EEEEcCC
Q 010769 454 SVAFSED 460 (502)
Q Consensus 454 ~~~~spd 460 (502)
+++++|.
T Consensus 282 ~i~~~p~ 288 (394)
T 3b7f_A 282 PIVVHQR 288 (394)
T ss_dssp EEEECSS
T ss_pred EEEECCC
Confidence 7888864
No 346
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=91.29 E-value=10 Score=36.04 Aligned_cols=99 Identities=9% Similarity=-0.001 Sum_probs=49.3
Q ss_pred cEEEEEecCCcEEEEECCC-CeeeEEe--ccCCCCeEEEEEcCCCCcEEEEEECCC----cEEEEeCCCCCC---ccce-
Q 010769 280 NILASASADKQVKIWDVAA-GKCNLTL--EHHTDKVQAVAWNHHSPQILLSGSFDR----SVVMKDARISTH---SGFK- 348 (502)
Q Consensus 280 ~~l~sgs~Dg~v~vwd~~~-~~~~~~~--~~h~~~v~~l~~~~~~~~~l~s~~~dg----~i~vwd~~~~~~---~~~~- 348 (502)
..|..|...| +.+++... ++.-..+ ......|.+|.+.|..+..|.+++..| .|...+ ..+.. ....
T Consensus 23 g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~tW~~~~~~~ 100 (394)
T 3b7f_A 23 VMLLVATIKG-AWFLASDPARRTWELRGPVFLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGGNWTEATRPP 100 (394)
T ss_dssp CEEEEEETTE-EEEEEECTTSCSEEEEEEESTTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTSCCEECSBCC
T ss_pred CEEEEEecCc-eEEEECCCCCCCceECCccCCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCCCceECCccc
Confidence 4677777776 55554332 2211111 123457999999984334455555454 344332 11111 1100
Q ss_pred -Ee---------ecCCeEEEEeCCCC-CCEEEEEeCCCeEEEE
Q 010769 349 -WA---------VAADVESLAWDPHA-EHSFVVSLEDGTIKGF 380 (502)
Q Consensus 349 -~~---------~~~~v~~v~~~p~~-~~~l~~~~~dg~i~i~ 380 (502)
.. ....|.++++.|.+ +..+++++..+.|...
T Consensus 101 ~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S 143 (394)
T 3b7f_A 101 AFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRS 143 (394)
T ss_dssp CCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEE
T ss_pred cCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEE
Confidence 00 11247788898743 4467777666665544
No 347
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=90.50 E-value=11 Score=35.23 Aligned_cols=60 Identities=12% Similarity=0.186 Sum_probs=34.8
Q ss_pred CCeEEEEeCCC------CCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccE--EE-ecCCCCeeEEEEcCCCCCEEEE
Q 010769 353 ADVESLAWDPH------AEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSF--TL-HAHDKAVCTISYNPLVPNLLAT 422 (502)
Q Consensus 353 ~~v~~v~~~p~------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~--~~-~~h~~~v~~l~~sp~~~~~l~t 422 (502)
..+..+.|... ...++++....+.|...++... .... .+ ......+..+++.|+| .++++
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~---------~~~~~~~~~~~~~~rp~~v~~~pdG-~lyv~ 339 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGD---------KVTEDGRILTDRGQRIRDVRTGPDG-YLYVL 339 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETT---------EEEEEEEESGGGCCCEEEEEECTTS-CEEEE
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCC---------eEeeeEEcccCCCCceeEEEECCCC-cEEEE
Confidence 34566666532 1346666667778888877643 1111 12 1223578899999988 54443
No 348
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.27 E-value=12 Score=34.26 Aligned_cols=176 Identities=7% Similarity=0.029 Sum_probs=86.3
Q ss_pred CCCCcEEEEEec-CCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECC-------------CcEEEEeCCC
Q 010769 276 KEFRNILASASA-DKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFD-------------RSVVMKDARI 341 (502)
Q Consensus 276 ~~~~~~l~sgs~-Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~d-------------g~i~vwd~~~ 341 (502)
.+++.+.++... ++.|...+..... ...+.. .. +--+++++..+..+...+ ..|+..++..
T Consensus 23 ~~g~~iy~~n~~d~~~ly~~~~dg~~-~~~l~~--~~--~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg 97 (302)
T 3s25_A 23 ESDGEVFFSNTNDNGRLYAMNIDGSN-IHKLSN--DT--AMYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNG 97 (302)
T ss_dssp EETTEEEEEEGGGTTEEEEEETTSCS-CEEEEE--EE--EEEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTS
T ss_pred EeCCEEEEEeCCCCceEEEEcCCCCC-CEEccC--Cc--eeeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCC
Confidence 443433333322 4556666644332 333332 11 234567774555554443 3566666665
Q ss_pred CCCccceEeecCCeEEEEeCCCCCCEEEEE---eCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCC
Q 010769 342 STHSGFKWAVAADVESLAWDPHAEHSFVVS---LEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN 418 (502)
Q Consensus 342 ~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~---~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~ 418 (502)
..... . .... +..|++.+..++++. .....|+..++.. .....+..+.. .+++|.+..
T Consensus 98 ~~~~~--l-~~~~--~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG----------s~~~~lt~~~~----~~~~~~g~~ 158 (302)
T 3s25_A 98 HGSTV--L-DPDP--CIYASLIGNYIYYLHYDTQTATSLYRIRIDG----------EEKKKIKNHYL----FTCNTSDRY 158 (302)
T ss_dssp CCCEE--E-ECSC--EEEEEEETTEEEEEEESSSSCEEEEEEETTS----------CCCEEEESSCC----CCSEEETTE
T ss_pred CcceE--e-ecCC--ccEEEEeCCEEEEEeecCCCCceEEEEECCC----------CCeEEEeCCCc----eEeeEECCE
Confidence 54222 1 1122 225667776555554 2344555555553 22334443432 345677744
Q ss_pred EEEEEeCCCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC-cEEEEECCC
Q 010769 419 LLATGSTDKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG-KLEIWDTLS 481 (502)
Q Consensus 419 ~l~t~s~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg-~i~vwd~~~ 481 (502)
+..+.....+|.+.++.......+ .. +... ..++|++.+|+.+...++ .|..-++..
T Consensus 159 iy~t~~g~~~Iy~~~l~g~~~~~l--~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 159 FYYNNPKNGQLYRYDTASQSEALF--YD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp EEEECTTTCCEEEEETTTTEEEEE--EC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred EEEEeCCCceEEEEECCCCCEEEE--eC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 444544467888888877654333 22 2232 235688887555543332 455555543
No 349
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=88.47 E-value=17 Score=34.42 Aligned_cols=171 Identities=6% Similarity=0.086 Sum_probs=96.6
Q ss_pred cEEEEECCCC--eeeEEecc------CCCCeEEEEEc---CC---CCcEEEEE-ECCCcEEEEeCCCCCCccce------
Q 010769 290 QVKIWDVAAG--KCNLTLEH------HTDKVQAVAWN---HH---SPQILLSG-SFDRSVVMKDARISTHSGFK------ 348 (502)
Q Consensus 290 ~v~vwd~~~~--~~~~~~~~------h~~~v~~l~~~---~~---~~~~l~s~-~~dg~i~vwd~~~~~~~~~~------ 348 (502)
.|.+||+.+. +.++++.- ..+.+..+.+. |. +..++..+ +..+.|.|+|+.+++.....
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 5777888888 87777642 13457777777 22 11343333 45678999999876543211
Q ss_pred ------------EeecCCeEEEEeCCC----CCCEEEEEeCCCeEEEEEC---CCCCCCCCCCCCCccEEEecC--CCCe
Q 010769 349 ------------WAVAADVESLAWDPH----AEHSFVVSLEDGTIKGFDI---RTAKSDPDSTSQQSSFTLHAH--DKAV 407 (502)
Q Consensus 349 ------------~~~~~~v~~v~~~p~----~~~~l~~~~~dg~i~i~d~---~~~~~~~~~~~~~~~~~~~~h--~~~v 407 (502)
+.....+..++++|+ +..+.+.......++-... +.... ...+..+... ....
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~V~T~~L~~~~~------~~~v~~~G~kg~~s~~ 277 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYSVNTKELKQKGG------KLNPELLGNRGKYNDA 277 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEEEEHHHHSSTTC------CCCCEEEEECCTTCCE
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEEEEHHHhhCcch------hhceEEeeecCCCCCc
Confidence 011346788889887 4434444444334444432 22210 1222222211 1334
Q ss_pred eEEEEc-CCCCCEEEEEeCCCcEEEEECCC-----CCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEe
Q 010769 408 CTISYN-PLVPNLLATGSTDKMVKLWDLSN-----NQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGG 469 (502)
Q Consensus 408 ~~l~~s-p~~~~~l~t~s~dg~i~vwd~~~-----~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~ 469 (502)
..+++. .+| .++++--..+.|..|+..+ ... .+.........+..+.+.+++. |.+.++
T Consensus 278 ~~~~~D~~~G-~ly~~~~~~~aI~~w~~~~~~~~~~n~-~~l~~d~~l~~pd~~~i~~~g~-Lwv~sn 342 (381)
T 3q6k_A 278 IALAYDPKTK-VIFFAEANTKQVSCWNTQKMPLRMKNT-DVVYTSSRFVFGTDISVDSKGG-LWFMSN 342 (381)
T ss_dssp EEEEECTTTC-EEEEEESSSSEEEEEETTSCSBCGGGE-EEEEECTTCCSEEEEEECTTSC-EEEEEC
T ss_pred ceEEEeCCCC-eEEEEeccCCeEEEEeCCCCccccCce-EEEEECCCccccCeEEECCCCe-EEEEEC
Confidence 456675 455 7777777888999999876 122 2233333556788888888876 555543
No 350
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=88.12 E-value=15 Score=33.23 Aligned_cols=186 Identities=16% Similarity=0.135 Sum_probs=101.2
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCccc
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSGF 347 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~ 347 (502)
.|..|+.... +.++. . ||.|..|-....-.+..-..-...|..++.... ..+.-. +|.|..|-.........
T Consensus 64 ~i~~ia~G~~--hs~~l-~-~G~v~~wG~n~~Gqlg~P~~~~~~v~~ia~G~~---hs~al~-~G~v~~wG~n~~gqlg~ 135 (282)
T 3qhy_B 64 GVDAIAAGNY--HSLAL-K-DGEVIAWGGNEDGQTTVPAEARSGVDAIAAGAW---ASYALK-DGKVIAWGDDSDGQTTV 135 (282)
T ss_dssp CCCEEEECSS--EEEEE-E-TTEEEEEECCTTSTTCCCGGGSSSEEEEEEETT---EEEEEE-TTEEEEEECCTTSTTSC
T ss_pred CEEEEEeCCC--EEEEE-E-CCEEEEeeCCCCCCCCCCcccCCCeEEEECcCC---EEEEEe-CCeEEEecCCCCCcCCC
Confidence 5777776554 34444 4 899999986542211111111346777776654 333444 99999998765333222
Q ss_pred eEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 348 KWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 348 ~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
.......|..++.-.. +.++ -. +|.|+.|-........ .+ ......|..++.... ..++. .+|
T Consensus 136 ~~~~~~~i~~i~~G~~--~~~~-l~-~G~v~~wG~n~~gqlg-----~p----~~~~~~v~~i~~G~~--hs~al--~~G 198 (282)
T 3qhy_B 136 PAEAQSGVTALDGGVY--TALA-VK-NGGVIAWGDNYFGQTT-----VP----AEAQSGVDDVAGGIF--HSLAL--KDG 198 (282)
T ss_dssp CGGGGSSEEEEEECSS--EEEE-EE-TTEEEEEECCTTSTTS-----CC----GGGGSSEEEEEECSS--EEEEE--ETT
T ss_pred CccCCCCeEEEEcccC--EEEE-EE-CCEEEEecCCCCCCCC-----Cc----eecCCCeEEEEecCC--EEEEE--ECC
Confidence 2223455777766432 2333 33 7999999876542111 01 011345777766542 33444 599
Q ss_pred cEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEEEECCCCcc
Q 010769 428 MVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEIWDTLSDAG 484 (502)
Q Consensus 428 ~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~vwd~~~~~~ 484 (502)
.|+.|=.......-+ . ......|..++...... ++.. +|.|+.|=.....+
T Consensus 199 ~v~~wG~n~~gqlg~-p-~~~~~~v~~i~~G~~h~--~al~--~g~v~~wG~n~~gq 249 (282)
T 3qhy_B 199 KVIAWGDNRYKQTTV-P-TEALSGVSAIASGEWYS--LALK--NGKVIAWGSSRTAP 249 (282)
T ss_dssp EEEEEECCTTSTTCC-C-GGGGSSCCEEEECSSCE--EEEE--TTEEEEESTTCCCC
T ss_pred eEEEEECCCCCCCCC-C-cccCCCceEEEcCCCEE--EEEE--CCEEEEecCCCCcc
Confidence 999997654321110 0 01123466676655443 4433 88999997765443
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=87.93 E-value=30 Score=36.54 Aligned_cols=150 Identities=11% Similarity=0.128 Sum_probs=80.4
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccC-------CCCeEEEEEcCCCCcEEEEEECCCc----E
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSFDRS----V 334 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~~~dg~----i 334 (502)
...|.+|+++|.....++.+...+.|...+ ..|+.-..+..+ ...|.+|++.|..+..++++..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 458999999998667788888777776665 334322223221 2469999999865555655543311 2
Q ss_pred EEEeCCCCCCccceEee--------c--CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe---
Q 010769 335 VMKDARISTHSGFKWAV--------A--ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH--- 401 (502)
Q Consensus 335 ~vwd~~~~~~~~~~~~~--------~--~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~--- 401 (502)
.||-.......-..... . ..+..++++|..+..++++...+.| |-....- +.-..+.
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl--~~S~DgG--------~TW~~~~~~~ 162 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGI--WKSSDRA--------KTWTNVTSIP 162 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCE--EEESSTT--------SSCEEETTSC
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCE--EEECCCC--------cccCCCccCc
Confidence 33332221111000110 0 1356788888666677777644433 3222221 1111111
Q ss_pred ---cCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 402 ---AHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 402 ---~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
.....+..+.++|..+..|+.+..+
T Consensus 163 ~~~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 163 DAFTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CCCSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cccCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899988655566666554
No 352
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=87.26 E-value=6.2 Score=39.36 Aligned_cols=103 Identities=10% Similarity=-0.025 Sum_probs=67.6
Q ss_pred cEEEEeCCC----CCCccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCC--C-CCCCccEEEecCCC
Q 010769 333 SVVMKDARI----STHSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPD--S-TSQQSSFTLHAHDK 405 (502)
Q Consensus 333 ~i~vwd~~~----~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~--~-~~~~~~~~~~~h~~ 405 (502)
.|.+.|.+. ................+..+|+|.++++.|--+.++.++|++....... . .....+.....-.-
T Consensus 299 gv~ViD~~~~~~~~~~~~~~iP~pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl 378 (638)
T 3sbq_A 299 KTPVLDGRKKDGKDSKFTRYVPVPKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL 378 (638)
T ss_dssp CCCEEECSCBTTBCCSSEEEEEESSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS
T ss_pred CeeEEccccccccCCceEEEEeCCCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC
Confidence 467777776 3334445566777788999999997777788899999999985311000 0 00111222222234
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010769 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
.....+|.+.| +...|.-.|..|.-|++..
T Consensus 379 GPlHt~Fd~~G-~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 379 GPLHTTFDGRG-NAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp CEEEEEECSSS-EEEEEETTTTEEEEEEHHH
T ss_pred cccEEEECCCC-ceEeeeeecceEEEEeccH
Confidence 56778999987 6666667899999999865
No 353
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=84.41 E-value=0.34 Score=46.51 Aligned_cols=15 Identities=20% Similarity=0.333 Sum_probs=7.1
Q ss_pred HHHHHHHHccccccc
Q 010769 26 EEIEEIINSGALEHE 40 (502)
Q Consensus 26 ~~~~~~~~~~~~~~~ 40 (502)
+.+.+++.+....++
T Consensus 323 ~~l~~~l~~~~~~~l 337 (386)
T 2ca6_A 323 DEIREVFSTRGRGEL 337 (386)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHhhhcCcchh
Confidence 445555555444443
No 354
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=83.55 E-value=46 Score=34.73 Aligned_cols=106 Identities=15% Similarity=0.122 Sum_probs=60.8
Q ss_pred ceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccC-------CCCeEEEEEcCCCCcEEEEEECC-------Cc
Q 010769 268 SVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHH-------TDKVQAVAWNHHSPQILLSGSFD-------RS 333 (502)
Q Consensus 268 ~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h-------~~~v~~l~~~~~~~~~l~s~~~d-------g~ 333 (502)
.|..|+++|.....++.+...+.|..++ ..++.-..+..+ ...|.+|+++|..+..++++... +.
T Consensus 24 ~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 24 FMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp CCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred eeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 7999999998666777787667776665 233322223221 24589999999665555555421 12
Q ss_pred EEEEeCCCCCCccceEeec----------CCeEEEEeCCCCCCEEEEEeCC
Q 010769 334 VVMKDARISTHSGFKWAVA----------ADVESLAWDPHAEHSFVVSLED 374 (502)
Q Consensus 334 i~vwd~~~~~~~~~~~~~~----------~~v~~v~~~p~~~~~l~~~~~d 374 (502)
..||-.......-...... ..+.+++++|..+..++++...
T Consensus 103 ~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 3444433222111111110 1246799999877778887743
No 355
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.83 E-value=37 Score=33.13 Aligned_cols=74 Identities=8% Similarity=-0.066 Sum_probs=36.8
Q ss_pred CccEEEecCC-CCeeEEEEcCCC-----CCEEEEEeCCCcEEEEECCCCCee-EEEEe---------cCCCCCEEEEEEc
Q 010769 395 QSSFTLHAHD-KAVCTISYNPLV-----PNLLATGSTDKMVKLWDLSNNQPS-CIASR---------NPKAGAVFSVAFS 458 (502)
Q Consensus 395 ~~~~~~~~h~-~~v~~l~~sp~~-----~~~l~t~s~dg~i~vwd~~~~~~~-~~~~~---------~~~~~~v~~~~~s 458 (502)
.++..+..|. ..++.+.|-... ...++.+...+.|....+...... ....+ ....+.+..+.+.
T Consensus 265 ~P~~~~~~~~g~Ap~G~~~Y~G~~fP~~~g~~f~~~~~g~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~r~~~v~~~ 344 (463)
T 2wg3_C 265 PSLLEFKPFSNGPLVGGFVYRGCQSERLYGSYVFGDRNGNFLTLQQSPVTKQWQEKPLCLGTSGSCRGYFSGHILGFGED 344 (463)
T ss_dssp CCCEECCC----CEEEEEECCCSSCTTTTTCEEEEETTSCEEEEEC-----CCEEEEECEEETTSSCSCCCSEEEEEEEC
T ss_pred CCeEEeeCCCCccccceEEEeCCCChhhcceEEEecCCCcEEEEEeCCCCceeeEEEeecCCcccccccccCcceEEEEC
Confidence 4566655442 567888875321 112444444577666666443211 11111 1124679999999
Q ss_pred CCCCcEEEEEe
Q 010769 459 EDSPFVLAIGG 469 (502)
Q Consensus 459 pd~~~llasg~ 469 (502)
|+|. |+++..
T Consensus 345 pdG~-Lyv~~~ 354 (463)
T 2wg3_C 345 ELGE-VYILSS 354 (463)
T ss_dssp TTCC-EEEEEE
T ss_pred CCCC-EEEEec
Confidence 9998 455443
No 356
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=82.67 E-value=38 Score=33.10 Aligned_cols=113 Identities=11% Similarity=0.134 Sum_probs=61.8
Q ss_pred CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEe---------cCCCCeeEEEEcCC---CCCEE
Q 010769 353 ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLH---------AHDKAVCTISYNPL---VPNLL 420 (502)
Q Consensus 353 ~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~---------~h~~~v~~l~~sp~---~~~~l 420 (502)
.....|+|.|++...++++...|.|++++...... ..++..+. .....+..|+|+|+ ...+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~------~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lY 87 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIF------KEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLY 87 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBC------SSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEE
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCee------eeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEE
Confidence 45678999998753466667889999997532210 01222111 12456889999995 21333
Q ss_pred EEEeC--C----------CcEEEEECCCC--------CeeEEEEec--CCCCCEEEEEEcCCCCcEEEEEeCCC
Q 010769 421 ATGST--D----------KMVKLWDLSNN--------QPSCIASRN--PKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 421 ~t~s~--d----------g~i~vwd~~~~--------~~~~~~~~~--~~~~~v~~~~~spd~~~llasg~~dg 472 (502)
++-+. + ..|.-|.+... ....+.... .....-..|+|.|||. |+++.|..+
T Consensus 88 v~yt~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~-LYv~~Gd~~ 160 (463)
T 2wg3_C 88 VSYTTNQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF-LYIILGDGM 160 (463)
T ss_dssp EEEEECCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC-EEEEECCTT
T ss_pred EEEeCCCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc-EEEEeCCCC
Confidence 33332 1 13444655421 112232222 1122367899999997 666666543
No 357
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=82.24 E-value=15 Score=39.79 Aligned_cols=39 Identities=23% Similarity=0.490 Sum_probs=32.8
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEec
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 306 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~ 306 (502)
..|.++...++ ..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~-~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETT-TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCC-CcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 45677777777 5699999999999999999999988763
No 358
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=81.72 E-value=53 Score=34.11 Aligned_cols=234 Identities=14% Similarity=0.144 Sum_probs=0.0
Q ss_pred CCCCCCEEEEecCCC-----cEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCccccee---------
Q 010769 205 DREKGNFMAVGSMEP-----AIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVL--------- 270 (502)
Q Consensus 205 ~s~~~~~la~g~~dg-----~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~--------- 270 (502)
++|++++++.+-..| .|+++|+.+...+. +.+.
T Consensus 137 ~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~---------------------------------~~~~~~~k~~~~~ 183 (711)
T 4hvt_A 137 CFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK---------------------------------NGFEPITNSGKLL 183 (711)
T ss_dssp CSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT---------------------------------TCSCCBCTTCCBC
T ss_pred cCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC---------------------------------CCccccccccccc
Q ss_pred ----eE-EecCCCCcEEEEE----------ecCCcEEEEECCCC--eeeEEeccCCCCeEEEEEcCCCCc-----EEEEE
Q 010769 271 ----GL-AWNKEFRNILASA----------SADKQVKIWDVAAG--KCNLTLEHHTDKVQAVAWNHHSPQ-----ILLSG 328 (502)
Q Consensus 271 ----~l-~~~~~~~~~l~sg----------s~Dg~v~vwd~~~~--~~~~~~~~h~~~v~~l~~~~~~~~-----~l~s~ 328 (502)
++ +|... ..++++. +.-..|+.|.+-+. +-...+.+....+..-.+....+. .+++.
T Consensus 184 ~~~~~~~~W~d~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 262 (711)
T 4hvt_A 184 EGKFTYPTWINK-DTIIFNLVLHKNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISA 262 (711)
T ss_dssp CEETCCEEEEET-TEEEECCCCSTTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEE
T ss_pred ccccceeeEECC-CEEEEEeCCCCCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEE
Q ss_pred E---CCCcEEEEeCCCCCCccceEeecCCeEEEEeCCCCCCEEEEEeC---------CCeEEEEECCC-------CCCCC
Q 010769 329 S---FDRSVVMKDARISTHSGFKWAVAADVESLAWDPHAEHSFVVSLE---------DGTIKGFDIRT-------AKSDP 389 (502)
Q Consensus 329 ~---~dg~i~vwd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~---------dg~i~i~d~~~-------~~~~~ 389 (502)
+ ....+.+.+...+.............. +..+..+..++.+.+. .+.|...++.. .
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~---- 337 (711)
T 4hvt_A 263 NKDFYNYDNYILDTKYKNLKLQKINMPSDAT-LQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDK---- 337 (711)
T ss_dssp ESSSSCEEEEEEECSSSSCEEEECCSCTTCE-EEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGC----
T ss_pred ecccCceeEEEEcCCCCCCcceEeecCCcce-EeeeECCEEEEEECcccccccccCCCCeEEEEECCccccccccc----
Q ss_pred CCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCCCc--EEEEECCCCCeeEEE-EecCCCCCEEEEEEcCCCCcEEE
Q 010769 390 DSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTDKM--VKLWDLSNNQPSCIA-SRNPKAGAVFSVAFSEDSPFVLA 466 (502)
Q Consensus 390 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~dg~--i~vwd~~~~~~~~~~-~~~~~~~~v~~~~~spd~~~lla 466 (502)
.....+..+.....--.+...+..++++...++. |.++++.++...... ......+.+..+.+++++..+++
T Consensus 338 -----~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~ 412 (711)
T 4hvt_A 338 -----TSLKILFTPTANEVFNFISTTKDRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALI 412 (711)
T ss_dssp -----TTCEEEECCCTTEEEEEEEECSSCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEE
T ss_pred -----ccceEEECCCCCCeEEEEEEECCEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEE
Q ss_pred EEeCC---CcEEEEECCCCc
Q 010769 467 IGGSK---GKLEIWDTLSDA 483 (502)
Q Consensus 467 sg~~d---g~i~vwd~~~~~ 483 (502)
+.++. +.+..+|+. ++
T Consensus 413 ~~ss~~~P~~~~~~d~~-~~ 431 (711)
T 4hvt_A 413 TIENSIVPPTIYLWVKT-HE 431 (711)
T ss_dssp EEECSSSCCEEEEECTT-SC
T ss_pred EEecCCCCCEEEEEeCC-Cc
No 359
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=80.34 E-value=34 Score=36.08 Aligned_cols=154 Identities=12% Similarity=0.018 Sum_probs=77.0
Q ss_pred CCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC--CccceEe----ecCCeEEEEeCCCCCCEEEEEeCCCe----EE
Q 010769 309 TDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST--HSGFKWA----VAADVESLAWDPHAEHSFVVSLEDGT----IK 378 (502)
Q Consensus 309 ~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~----~~~~v~~v~~~p~~~~~l~~~~~dg~----i~ 378 (502)
...|.+|.++|..+..+++++..+.|...+=.... .+..... ....+.+++++|..+..++++..... -.
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~~ 93 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWAA 93 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCCE
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCcccE
Confidence 46899999999877788888877776554321110 0000000 12468999999865556666543311 23
Q ss_pred EEECCCCCCCCCCCCCCccEEEec---------CCCCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe-c--
Q 010769 379 GFDIRTAKSDPDSTSQQSSFTLHA---------HDKAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR-N-- 446 (502)
Q Consensus 379 i~d~~~~~~~~~~~~~~~~~~~~~---------h~~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~-~-- 446 (502)
||-....- ..-..+.. ....+..++++|..+..++.+...+.|. .....++.-..... .
T Consensus 94 v~~S~DgG--------~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~gl~-~S~DgG~TW~~~~~~~~~ 164 (789)
T 1sqj_A 94 FYVSEDRG--------QSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEGIW-KSSDRAKTWTNVTSIPDA 164 (789)
T ss_dssp EEEESSTT--------SEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSCEE-EESSTTSSCEEETTSCCC
T ss_pred EEEECCCC--------CcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCCEE-EECCCCcccCCCccCccc
Confidence 33322221 11111110 0113567888886556677766444332 12222221111111 1
Q ss_pred -CCCCCEEEEEEcCCCCcEEEEEeCC
Q 010769 447 -PKAGAVFSVAFSEDSPFVLAIGGSK 471 (502)
Q Consensus 447 -~~~~~v~~~~~spd~~~llasg~~d 471 (502)
.....+..+.++|.....|.++..+
T Consensus 165 ~~~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 165 FTNGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp CSTTTCEEEEEECTTSTTCEEEEESS
T ss_pred cCCCCCeEEEEECCCCCCEEEEEEcC
Confidence 1124578899988543234445443
No 360
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=74.11 E-value=27 Score=38.72 Aligned_cols=39 Identities=23% Similarity=0.490 Sum_probs=31.8
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEec
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLE 306 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~ 306 (502)
..+.+++..++ ..++++-+.|+++|||++.+++++.+..
T Consensus 238 ~~~vs~~~~~~-~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 238 NTIISMIFLST-YNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp TCBSCCEEETT-TTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred ceeEEeeccCC-ccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566666666 5689999999999999999999988763
No 361
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=73.52 E-value=77 Score=31.61 Aligned_cols=180 Identities=14% Similarity=0.211 Sum_probs=95.3
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCc----------------------------EEEEECCCCeeeEEeccC--CCC--
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQ----------------------------VKIWDVAAGKCNLTLEHH--TDK-- 311 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~----------------------------v~vwd~~~~~~~~~~~~h--~~~-- 311 (502)
.|-..+.-..|..+|..-++....+|+ |.|++=.+|+.+.++... ...
T Consensus 176 a~yt~~~V~DlDGDGkaEIvv~TadGt~dg~g~~ig~~~~dyrn~~g~il~GpEyL~vfdG~TG~~l~~~~~~p~rg~~~ 255 (591)
T 2zux_A 176 AHYTQFMVYDLDGDGKAEVAMKTADGTKDGTGKVIGNANADYRNEQGRVLSGPEYLTVFQGSTGKELVTANFEPARGNVS 255 (591)
T ss_dssp TTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSSTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCCGG
T ss_pred cccCceeEEEcCCCCcceEEEEccCCcccCCceEecccccccccccceeecCCcEEEEEeCCCCCEEecccCCCCCCccc
Confidence 366678888888888778888877776 778887788777665321 111
Q ss_pred -------------eEEEEEc-CCCCcEEEEEEC--CCcEEEEeCCCCCCccceEeec--------------CCeEEEEeC
Q 010769 312 -------------VQAVAWN-HHSPQILLSGSF--DRSVVMKDARISTHSGFKWAVA--------------ADVESLAWD 361 (502)
Q Consensus 312 -------------v~~l~~~-~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~--------------~~v~~v~~~ 361 (502)
..++++. -+.+.++++-+. ...|..||.+..+... .|... ..+....+.
T Consensus 256 ~WGD~ygnR~drf~~~vayLDG~~Ps~v~~rGyYtr~~v~A~d~~~~~L~~-~W~~d~~~~~~~~~~gqg~h~~~vaDVD 334 (591)
T 2zux_A 256 DWGDSYGNRVDRFLAGIAYLDGQRPSLIMTRGYYAKTMLVAYNFRDGKLSK-LWTLDSSKSGNEAFAGQGNHNLSIADVD 334 (591)
T ss_dssp GGTCSSSSGGGCEEEEEECTTSSSCEEEEEECCSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGSSCCCSCCEEECCS
T ss_pred ccccccccccccceeeEEECCCCCceEEEeccccceeEEEEEECCCCceEE-EEEecCCCCCcccccccCCCCCeeEeCC
Confidence 2233332 112223322211 1247778876654322 33221 123333444
Q ss_pred CCCCCEEEEEe----CCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCC-EEEEEeCCC----cEEEE
Q 010769 362 PHAEHSFVVSL----EDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPN-LLATGSTDK----MVKLW 432 (502)
Q Consensus 362 p~~~~~l~~~~----~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~t~s~dg----~i~vw 432 (502)
-+|..-++.|+ .||++ +|... .+|...+....|.|+.+. -++.+..++ -..+.
T Consensus 335 gDG~dEIv~Gs~~iD~dG~~-L~st~-----------------~gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~ 396 (591)
T 2zux_A 335 GDGKDEIIFGSMAVDHDGKG-MYSTG-----------------LGHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFR 396 (591)
T ss_dssp SSSSCEEEETTEEECTTSCE-EEECS-----------------CCCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEE
T ss_pred CCCCceEEEeeeEECCCCCE-eeeCC-----------------CCCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEE
Confidence 45544455443 23332 33322 267777777778887533 344444431 35567
Q ss_pred ECCCCCeeEEEEecCCCCCEEEEEEcCCCC
Q 010769 433 DLSNNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 433 d~~~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
|..+++.........+.+......|.|+.+
T Consensus 397 dA~tG~vlw~~~~~~d~Gr~~~~Didp~~p 426 (591)
T 2zux_A 397 DAATGKILWGVYAGKDVGRGMAADIDPRYP 426 (591)
T ss_dssp ETTTCCEEEEECCSSCCCCEEEECCCTTSS
T ss_pred ECCCCcEEEEcCCCCCCCceeEEecCCCCC
Confidence 888887422222233456666666666644
No 362
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=71.26 E-value=39 Score=36.50 Aligned_cols=33 Identities=30% Similarity=0.331 Sum_probs=27.5
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010769 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
.+.+++..++. .+++|-+.|+++|+|++.+++.
T Consensus 237 ~~~~~~~~~~~-~~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 237 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp CEEEEEEETTT-TEEEEEETTCEEEEEETTTTEE
T ss_pred eEEEEeecCCC-cEEEEEECCCEEEEEECCCCCe
Confidence 45667777765 7999999999999999999874
No 363
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=69.67 E-value=80 Score=32.88 Aligned_cols=109 Identities=11% Similarity=0.012 Sum_probs=59.4
Q ss_pred CCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCC--CccceEe----ecCCeEEEEeCCCCCCEEEEEeCC-------Ce
Q 010769 310 DKVQAVAWNHHSPQILLSGSFDRSVVMKDARIST--HSGFKWA----VAADVESLAWDPHAEHSFVVSLED-------GT 376 (502)
Q Consensus 310 ~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~--~~~~~~~----~~~~v~~v~~~p~~~~~l~~~~~d-------g~ 376 (502)
+.|..|+++|.++..++++...+.|...+-.... .+..... ....+.+|+++|..+..++++... +.
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~~ 102 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPNM 102 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccCC
Confidence 3799999999876777777766666555422111 0000000 124589999999665566665432 12
Q ss_pred EEEEECCCCCCCCCCCCCCccEEEe-cC--------CCCeeEEEEcCCCCCEEEEEeCC
Q 010769 377 IKGFDIRTAKSDPDSTSQQSSFTLH-AH--------DKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 377 i~i~d~~~~~~~~~~~~~~~~~~~~-~h--------~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
..+|-....- +.-..+. .. ...+.+|+++|..+..|+.+...
T Consensus 103 ~~l~~S~DgG--------~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~ 153 (737)
T 2cn3_A 103 GAILRSTDRG--------ETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRC 153 (737)
T ss_dssp CEEEEESSSS--------SSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECST
T ss_pred ccEEEeCCCC--------CCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeecc
Confidence 3444443331 1111111 01 01246899999776777777643
No 364
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=68.32 E-value=77 Score=29.48 Aligned_cols=209 Identities=13% Similarity=0.105 Sum_probs=104.2
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCee--eEEe----ccCCCCeEEEEEcCC---CCcEEEEEE--CCCcEE
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKC--NLTL----EHHTDKVQAVAWNHH---SPQILLSGS--FDRSVV 335 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~--~~~~----~~h~~~v~~l~~~~~---~~~~l~s~~--~dg~i~ 335 (502)
...+.|+|.|++ .++++--..|.|++++...++. +..+ .........|+++|+ +..+.++-+ .++.|.
T Consensus 32 ~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV 110 (347)
T ss_dssp SSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE
T ss_pred CCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE
Confidence 457899999995 4665554489999998765543 2222 123456889999995 324444322 345565
Q ss_pred EEeCCCCC-----C--ccceE-ee----cCCeEEEEeCCCCCCEEEEEe-------------CCCeEEEEECCCCCCCCC
Q 010769 336 MKDARIST-----H--SGFKW-AV----AADVESLAWDPHAEHSFVVSL-------------EDGTIKGFDIRTAKSDPD 390 (502)
Q Consensus 336 vwd~~~~~-----~--~~~~~-~~----~~~v~~v~~~p~~~~~l~~~~-------------~dg~i~i~d~~~~~~~~~ 390 (502)
-|.+.... . ....+ .. ......+.|.|++. ++++.+ ..|.|.-++........+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~-Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKM-LYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSC-EEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCC-EEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 56554421 1 11111 11 12345699999875 444432 135555555432211111
Q ss_pred CCCCCccEEEecCCCCeeEEEEcCCCCCEEEEE-eCCCcEEEEECCCCC----------------eeEEEEecCCCCCEE
Q 010769 391 STSQQSSFTLHAHDKAVCTISYNPLVPNLLATG-STDKMVKLWDLSNNQ----------------PSCIASRNPKAGAVF 453 (502)
Q Consensus 391 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~-s~dg~i~vwd~~~~~----------------~~~~~~~~~~~~~v~ 453 (502)
+.....++. .+|. ....++|+|++ .+.++= +.++.=.|--+..+. ...+.....+.....
T Consensus 190 Pf~~~~i~a-~G~R-Np~Gla~dp~G-~L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~~~~~~ap~ 266 (347)
T 3das_A 190 PFPGSPVYS-YGHR-NVQGLAWDDKQ-RLFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQWSTDEASPS 266 (347)
T ss_dssp SSTTCCEEE-BCCS-BCCEEEECTTC-CEEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEECTTTCCEE
T ss_pred CCCCCeEEe-eCCC-CcceEEECCCC-CEEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEecCCCCCCCc
Confidence 100011221 2343 45789999976 555442 333322222222211 011222222223566
Q ss_pred EEEEcCCCCcEEEEEeCCCcEEEEECCCC
Q 010769 454 SVAFSEDSPFVLAIGGSKGKLEIWDTLSD 482 (502)
Q Consensus 454 ~~~~spd~~~llasg~~dg~i~vwd~~~~ 482 (502)
.|+|.. +. ++...-..+.|....+...
T Consensus 267 G~~~~~-g~-~~~~~l~~~~l~~v~~~~~ 293 (347)
T 3das_A 267 GIAYAE-GS-VWMAGLRGERLWRIPLKGT 293 (347)
T ss_dssp EEEEET-TE-EEEEESTTCSEEEEEEETT
T ss_pred ceEEEc-Cc-eeeccccCCEEEEEEecCC
Confidence 777764 43 4555555556666666544
No 365
>4b1v_M Phosphatase and actin regulator 1; structural protein, nucleotide-binding, transcription regula transcription, muscle protein, ATP-binding; HET: ATP LAB; 1.75A {Mus musculus}
Probab=65.49 E-value=1.9 Score=23.40 Aligned_cols=12 Identities=17% Similarity=0.418 Sum_probs=8.8
Q ss_pred eccCCCCccCCc
Q 010769 7 WVPKGASKAVPE 18 (502)
Q Consensus 7 ~~~~g~~~~~~~ 18 (502)
-|+||+.|+.|+
T Consensus 21 likrgvlke~~~ 32 (32)
T 4b1v_M 21 LIKRGVLKEIYD 32 (32)
T ss_dssp HHHTTSCCCC--
T ss_pred HHHhhhhhhcCC
Confidence 378999999985
No 366
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=62.23 E-value=1.5e+02 Score=30.84 Aligned_cols=156 Identities=12% Similarity=-0.031 Sum_probs=75.9
Q ss_pred CCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCC--CCccceE-----e----ecCCeEEEEeCCCCCCEEEEEeCC--
Q 010769 308 HTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARIS--THSGFKW-----A----VAADVESLAWDPHAEHSFVVSLED-- 374 (502)
Q Consensus 308 h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~--~~~~~~~-----~----~~~~v~~v~~~p~~~~~l~~~~~d-- 374 (502)
-.+.|.+|.++|.++..++++...|.|....=... +.+.... . ....+.+++++|..+..++++...
T Consensus 19 ~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~~~ 98 (763)
T 3a0f_A 19 GGGFISGLVAHPTEKDLIYARTDIGGTYRWNAAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGDYV 98 (763)
T ss_dssp BCSCEEEEEECSSSTTCEEEEESSSCEEEEETTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECSCT
T ss_pred CCCceeEEEeCCCCCCEEEEEeccCcEEEECCCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecccc
Confidence 45689999999998888888887676544331110 0000000 0 123588999998655556655431
Q ss_pred ---CeEEEEECCCCCCCCCCCCCCccEEEecC-------CCC--eeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCee-E
Q 010769 375 ---GTIKGFDIRTAKSDPDSTSQQSSFTLHAH-------DKA--VCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPS-C 441 (502)
Q Consensus 375 ---g~i~i~d~~~~~~~~~~~~~~~~~~~~~h-------~~~--v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~-~ 441 (502)
....+|-....- +.-..+... .+. ...++++|..+..++.++..+.|. .....++.- .
T Consensus 99 ~~~~~~~i~~S~DgG--------~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~-~S~DgG~TW~~ 169 (763)
T 3a0f_A 99 QWDPWAAFLVSDDRG--------KTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW-RSTDRAQTWSR 169 (763)
T ss_dssp TTCSCCEEEEESSTT--------SSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE-EESSTTSSCEE
T ss_pred cCCCCceEEEECCCC--------CCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE-EECCCCcCccc
Confidence 112333333221 111111100 111 246888887656666666554332 222222211 1
Q ss_pred EEEec---CCCCCEEEEEEcCCCCcEEEEEeCCC
Q 010769 442 IASRN---PKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 442 ~~~~~---~~~~~v~~~~~spd~~~llasg~~dg 472 (502)
+..+. .....+..++++|..+..+.++..++
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 170 MNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 11111 01134778899886532344455544
No 367
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=59.82 E-value=1.7e+02 Score=30.53 Aligned_cols=156 Identities=13% Similarity=0.052 Sum_probs=79.7
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc------------CCCCeEEEEEcCCCCcEEEEEECC
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH------------HTDKVQAVAWNHHSPQILLSGSFD 331 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~------------h~~~v~~l~~~~~~~~~l~s~~~d 331 (502)
+-...|.+|.++|.+...++.+...|.|.... ..|+.-..+.. ....+.+|+++|..+..++++...
T Consensus 18 g~~g~i~~i~~~p~~~~~~y~~~~~ggv~~S~-DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~ia~dp~~~~~~~~~~g~ 96 (763)
T 3a0f_A 18 SGGGFISGLVAHPTEKDLIYARTDIGGTYRWN-AAKWEWEPITDFIINNALAGNGANLLGTESIALDPHNPDRLYLAQGD 96 (763)
T ss_dssp CBCSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCBTTCSSSCCCCCCSEEEEECCTTCTTCEEEEECS
T ss_pred cCCCceeEEEeCCCCCCEEEEEeccCcEEEEC-CCCCCeeECccCccccccCCCcccccceeEEEECCCCCCEEEEEecc
Confidence 34568999999998777888887777665554 23332222211 224589999998655555554431
Q ss_pred -----CcEEEEeCC-CCCCccceE-ee------cCC--eEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCc
Q 010769 332 -----RSVVMKDAR-ISTHSGFKW-AV------AAD--VESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQS 396 (502)
Q Consensus 332 -----g~i~vwd~~-~~~~~~~~~-~~------~~~--v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~ 396 (502)
....||-.. .++.-.... .. .+. ...++++|..+..++++...+.|. -....-... ..
T Consensus 97 ~~~~~~~~~i~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~v~p~~~~~v~a~~~~~~l~--~S~DgG~TW-----~~ 169 (763)
T 3a0f_A 97 YVQWDPWAAFLVSDDRGKTFKQYRSPVPMGANDMGRNGGERLAVNPHWTDELWFGSRTQGLW--RSTDRAQTW-----SR 169 (763)
T ss_dssp CTTTCSCCEEEEESSTTSSCEEEECSSCCCTTSTTTTSBCCEEECTTSTTCEEEECSSSCEE--EESSTTSSC-----EE
T ss_pred cccCCCCceEEEECCCCCCceeccCCcccCccccCccccceEEECCCCCCEEEEEeCCCcEE--EECCCCcCc-----cc
Confidence 113333322 222111111 00 111 146888887666677776554433 222221100 11
Q ss_pred cEEEe---cCCCCeeEEEEcCCCCCEEEEEeCCC
Q 010769 397 SFTLH---AHDKAVCTISYNPLVPNLLATGSTDK 427 (502)
Q Consensus 397 ~~~~~---~h~~~v~~l~~sp~~~~~l~t~s~dg 427 (502)
+..+. .....+..|+++|..+..++.+..++
T Consensus 170 ~~~~~~~~~~~~~~~~i~~~p~~~~~~~~~~~~~ 203 (763)
T 3a0f_A 170 MNQLPDSSTYGIGIISVIFDPKNVGTAYVASHAV 203 (763)
T ss_dssp CTTSCCCSCTTTCEEEEEECSSSTTCEEEEESST
T ss_pred cccCcccCCCccceEEEEECCCCCCEEEEEEeCC
Confidence 10011 11234778899887655566666554
No 368
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=56.39 E-value=1.3e+02 Score=28.17 Aligned_cols=72 Identities=18% Similarity=0.130 Sum_probs=44.0
Q ss_pred cceeeEEecCC--CCcEEEEEecCCcEEEEECCC-------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEE
Q 010769 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~Dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 337 (502)
..|.++...++ ...+|+.++..|.++...+.. |.....+.. .+.+..+...... ..++..+..|.+..+
T Consensus 99 e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~-~~i~l~T~~G~~irf 176 (370)
T 3l6v_A 99 ERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD-RDVLLFASNGKTVRF 176 (370)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC-ceEEEEeCCCeEEEE
Confidence 45555543321 235888999999999987642 222333433 4455555554444 567778888988888
Q ss_pred eCC
Q 010769 338 DAR 340 (502)
Q Consensus 338 d~~ 340 (502)
...
T Consensus 177 ~~~ 179 (370)
T 3l6v_A 177 GES 179 (370)
T ss_dssp EGG
T ss_pred Ecc
Confidence 754
No 369
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=55.93 E-value=1.1e+02 Score=27.22 Aligned_cols=210 Identities=12% Similarity=0.006 Sum_probs=112.4
Q ss_pred ccceeeEEecCCCCcEEEEEecCCcEEE---EECCCCeeeEEeccCCCCeEEEEEcCC-CCcEEEEEECCCcEEEEeCCC
Q 010769 266 TDSVLGLAWNKEFRNILASASADKQVKI---WDVAAGKCNLTLEHHTDKVQAVAWNHH-SPQILLSGSFDRSVVMKDARI 341 (502)
Q Consensus 266 ~~~V~~l~~~~~~~~~l~sgs~Dg~v~v---wd~~~~~~~~~~~~h~~~v~~l~~~~~-~~~~l~s~~~dg~i~vwd~~~ 341 (502)
.+.+..+.-..... .|+.-+..|.++- |++..++....+. ....|..+.. ++ ...+++..+..|.++...+..
T Consensus 23 gD~~~~~~~~~t~~-~ll~fT~~G~v~~~~~~~lp~~~~~~ll~-~~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~ 99 (276)
T 3no0_A 23 KAPVVNILRVPFTE-GLFLVSNRGRVYWIAGSQALQGSKVSLKS-REEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAE 99 (276)
T ss_dssp CCCEEEEEEEETTS-CEEEEETTSEEEEECSHHHHTSEECCCSS-TTCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGG
T ss_pred CCeEEEEEEECCCC-EEEEEcCCCeEEEEEhhhCccCcccccCC-CCCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHH
Confidence 35566655544433 4555666776654 3433322111133 3566777654 32 236899999999999988654
Q ss_pred CC-----CccceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCC
Q 010769 342 ST-----HSGFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLV 416 (502)
Q Consensus 342 ~~-----~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~ 416 (502)
-. ...........+..+..... ...++..+..|.+..+...................+.. ...|.++...+..
T Consensus 100 ~~~~~~G~~~i~lkegD~l~~~~~~~~-~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~-~d~vv~~~~~~~~ 177 (276)
T 3no0_A 100 FEYKAQGMPIIKLTEGDEVVSIASSVD-ETHILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEK-NDETSGLRIWNGE 177 (276)
T ss_dssp TTTCSTTEECSCCCTTCCEEEEEECCS-SCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCT-TCCEEEEEEESSC
T ss_pred hhhhcCCeEEEecCCCCEEEEEEEeCC-CCEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCC-CCEEEEEEEeCCC
Confidence 32 11111222345555555543 33688888999998887654322111000112222322 2445555544444
Q ss_pred CCEEEEEeCCCcEEEEECCCCCe-----eEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCCcEEE--EECCCCc
Q 010769 417 PNLLATGSTDKMVKLWDLSNNQP-----SCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKGKLEI--WDTLSDA 483 (502)
Q Consensus 417 ~~~l~t~s~dg~i~vwd~~~~~~-----~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg~i~v--wd~~~~~ 483 (502)
..++..+..|.++...+..-.. .-+..+ ...+.+..+....... -++..+.+|.+.. +++..-.
T Consensus 178 -~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-~~~~~lv~~~~~~~~~-~i~~~t~~G~~ir~~~~~~~i~ 248 (276)
T 3no0_A 178 -PYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-GTKDTLVDLIPIKEEV-ELLITTKNGKAFYDKINQKDIP 248 (276)
T ss_dssp -SEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-CSSSCEEEEEEESSEE-EEEEEETTSCEEEEEEEGGGSC
T ss_pred -CEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-cCCCcEEEEEEeCCCC-EEEEEcCCCeEEEeeeCHHHCC
Confidence 6888889999999887643211 012222 2334555554433333 2555677888877 8775433
No 370
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=51.92 E-value=3.7 Score=38.27 Aligned_cols=9 Identities=11% Similarity=0.106 Sum_probs=3.9
Q ss_pred CCCCccCCc
Q 010769 10 KGASKAVPE 18 (502)
Q Consensus 10 ~g~~~~~~~ 18 (502)
+|.++.-|.
T Consensus 225 lG~~q~~~~ 233 (335)
T 4fp9_B 225 LGRYQTPDK 233 (335)
T ss_dssp HTSCCCCCS
T ss_pred cCCccCCCc
Confidence 455544333
No 371
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=49.80 E-value=23 Score=36.51 Aligned_cols=38 Identities=13% Similarity=0.218 Sum_probs=31.0
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEecc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEH 307 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~ 307 (502)
..|.++.+. ..+|++-+.|+++|+|++.+++++.+..-
T Consensus 222 ~~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 456666653 35999999999999999999999887754
No 372
>2zuy_A YESX protein; beta-propeller, lyase; 1.65A {Bacillus subtilis}
Probab=47.17 E-value=2.3e+02 Score=28.37 Aligned_cols=183 Identities=13% Similarity=0.178 Sum_probs=98.3
Q ss_pred CcccceeeEEecCCCCcEEEEEecCCcE----------------------------EEEECCCCeeeEEeccC--CCC--
Q 010769 264 SHTDSVLGLAWNKEFRNILASASADKQV----------------------------KIWDVAAGKCNLTLEHH--TDK-- 311 (502)
Q Consensus 264 ~h~~~V~~l~~~~~~~~~l~sgs~Dg~v----------------------------~vwd~~~~~~~~~~~~h--~~~-- 311 (502)
.|-..+.-..|..+|..-++....+|++ .|++-.+|+.+.++... ...
T Consensus 180 ahyt~~~V~DlDGDGkaEIvv~TadGt~dg~g~vigd~~~dyr~~~g~il~G~eyL~vfdG~TG~~l~t~~~~p~rg~~~ 259 (620)
T 2zuy_A 180 AHYTQFMVYDLDGDGKAEIAMKTADGTTDGKGHIIGDEQADFRNEQGRILSGPEYLTVFKGETGEALTTVEYEPPRGKLE 259 (620)
T ss_dssp TTSCCCEEECSSSSSSCEEEEEECTTCBCTTSCBCSCTTCCCBCTTSCBCSSCCEEEEEETTTCCEEEEEECSSCCCSGG
T ss_pred cccCceeEEEcCCCCcceEEEEccCCcccCcceeecccccccccccceEecCCeEEEEEcCCCcceeeecccCCCcCccc
Confidence 3667788888888887788888777764 77887778776655321 111
Q ss_pred -------------eEEEEEcC-CCCcEEEEEEC--CCcEEEEeCCCCCCccceEeec--------------CCeEEEEeC
Q 010769 312 -------------VQAVAWNH-HSPQILLSGSF--DRSVVMKDARISTHSGFKWAVA--------------ADVESLAWD 361 (502)
Q Consensus 312 -------------v~~l~~~~-~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~--------------~~v~~v~~~ 361 (502)
..++++.. +.+.++++-+. -..|..||.+..+... .|... ..+....+.
T Consensus 260 ~WGD~yGnR~drf~~~vayLDG~~Ps~v~~rG~Ytr~~v~A~d~~~g~L~~-~W~~ds~~~~~~~~~gqg~H~~svaDVD 338 (620)
T 2zuy_A 260 DWGDGYGNRMDRFLAGTAYLDGERPSLVMARGYYTRTVLVAYDFRNGRLKK-RWVFDSNQPGHEAYAGQGNHSLSVADVD 338 (620)
T ss_dssp GGTSSSSTTTTCEEEEEECTTCC-CEEEEEECSSSSCEEEEEEEETTEEEE-EEEEETTSTTCGGGTTCCCSSCEEECCS
T ss_pred cccccccccccccceeEEecCCCCceEEEecCcccceeEEEEEccCCceee-eeEecCCCCcccccccccCcCceEEecC
Confidence 22333321 11223333221 2346667776544322 23221 123333344
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEE-ecCCCCeeEEEEcCCCCCEEEEE-eCC----CcEEEEECC
Q 010769 362 PHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTL-HAHDKAVCTISYNPLVPNLLATG-STD----KMVKLWDLS 435 (502)
Q Consensus 362 p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~t~-s~d----g~i~vwd~~ 435 (502)
-+|..-++.|+ .++|-. ...++.. .+|...+..-.|.|+.+.+.+.+ ..+ .-..++|.+
T Consensus 339 GDG~dEIv~Gs-----~~iD~d----------G~~L~st~~gHGDa~hv~d~dP~rpGlev~~~~E~~~~~~G~~~~DA~ 403 (620)
T 2zuy_A 339 GDGKDEIIYGA-----MAVDHD----------GTGLYSTGLGHGDAMHVGDLDPSRKGLEVFQVHEDATKPYGLSLRDAG 403 (620)
T ss_dssp SSSSCEEEETT-----EEECTT----------SSEEEECSCCCCSCEEEECSCTTSSSCEEEEECCCTTSSCSEEEEETT
T ss_pred CCCceeEEEee-----eEECCC----------CCEEeecCCCCCceeEEEecCCCCCCCEEEEEecCCCCCCceEEEECC
Confidence 44444455443 122211 1223222 26777788888888866655544 333 247789999
Q ss_pred CCCeeEEEEecCCCCCEEEEEEcCCCC
Q 010769 436 NNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 436 ~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
+++..-......+.+......|.|+.+
T Consensus 404 tG~vlw~~~~~~D~Gr~~~~Didp~~p 430 (620)
T 2zuy_A 404 TGEILWGVHAGTDVGRGMAAHIDPSYK 430 (620)
T ss_dssp TCCEEEEECCSSCCCEEEEECCCTTSS
T ss_pred CCcEEEEecCcccCCceEEEecCCCCC
Confidence 998433222334566677777777755
No 373
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=46.47 E-value=1.7e+02 Score=26.54 Aligned_cols=206 Identities=11% Similarity=0.051 Sum_probs=108.8
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
++..++++.+.+|.|+--.+........ .........+..+ +.+..+..... ...++..+
T Consensus 6 ~~e~~~v~~T~~G~iKr~~~~~~~~~~~------------------~~~g~~~~~lke~-D~l~~~~~~~~-~~~ll~~T 65 (312)
T 1suu_A 6 QKENIVVMLTKKGFLKRLSQNEYKLQGT------------------GGKGLSSFDLNDG-DEIVIALCVNT-HDYLFMIS 65 (312)
T ss_dssp --CEEEEEEETTCBEEEEEGGGSCBCCS------------------SCCCEECCCCCTT-CCEEEEEEEET-TCEEEEEE
T ss_pred CCCCEEEEEeCCCEEEEeEHHHhhcccc------------------CCCCceecccCCC-CEEEEEEEECC-CCEEEEEE
Confidence 4567889999999999887653221110 0001111122222 44555444444 34677778
Q ss_pred cCCcEEEEECC---CC------ee---eEEeccCCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCCc------c
Q 010769 287 ADKQVKIWDVA---AG------KC---NLTLEHHTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTHS------G 346 (502)
Q Consensus 287 ~Dg~v~vwd~~---~~------~~---~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~------~ 346 (502)
..|.++-.... .. .+ ...+. ....|.++...+. ....|+..+..|.++...+..-... .
T Consensus 66 ~~G~~~~~~~~~ip~~~r~~~G~~i~~~l~l~-~~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~ 144 (312)
T 1suu_A 66 NEGKLYLINAYEIKDSSRASKGQNISELINLG-DQEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIV 144 (312)
T ss_dssp TTSEEEEEEGGGSCC-------CBGGGTSCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEEC
T ss_pred CCCeEEEEEHHHCCCCCccCCCcChhhccCCC-CCCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEE
Confidence 88887766542 11 11 11122 2345555543321 2267888899999998877432211 1
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........+..+..... ...++..+..|.+..+....-..............+.. ...|.++.....+ ..|++.+..
T Consensus 145 i~L~~~d~lv~~~~~~~-~~~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~-~d~vv~~~~v~~~-~~l~~vt~~ 221 (312)
T 1suu_A 145 IKLNDKDFVTSAEIVFK-DEKVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKE-GDLFVKVLSVKEN-PYLLIVSEN 221 (312)
T ss_dssp BCCCTTCCEEEEEEECT-TCEEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCT-TCCEEEEEECTTC-SEEEEEETT
T ss_pred EecCCCCEEEEEEEeCC-CCEEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCC-CCEEEEEEEECCC-CeEEEEECC
Confidence 11122345555554432 33688888999999998765321111111122222332 3455565554444 568888999
Q ss_pred CcEEEEECCC
Q 010769 427 KMVKLWDLSN 436 (502)
Q Consensus 427 g~i~vwd~~~ 436 (502)
|..+...+..
T Consensus 222 G~~kr~~~~e 231 (312)
T 1suu_A 222 GYGKRLNMSK 231 (312)
T ss_dssp SEEEEEEGGG
T ss_pred CceEEEEHHH
Confidence 9999988754
No 374
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.06 E-value=1.8e+02 Score=26.67 Aligned_cols=166 Identities=12% Similarity=0.021 Sum_probs=89.6
Q ss_pred cceeeEEecCC--CCcEEEEEecCCcEEEEECCC-------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEE
Q 010769 267 DSVLGLAWNKE--FRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~~--~~~~l~sgs~Dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 337 (502)
..|.++...++ ...+++.++..|.|+.-.+.. +.....++. .+.+..+...... ..++..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~ill~T~~G~~~rf 172 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDLLLVSANGQSIRF 172 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEEEEEECCCeEEEE
Confidence 44555433321 145899999999999987653 222233443 3455555444444 567778889998888
Q ss_pred eCC--CCCCcc--------ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCe
Q 010769 338 DAR--ISTHSG--------FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAV 407 (502)
Q Consensus 338 d~~--~~~~~~--------~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v 407 (502)
... .-.... ........|.++...+.+ ..++..+..|.++.-.+.................+..-...+
T Consensus 173 ~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~-~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~l 251 (327)
T 3uc1_A 173 SATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREG-TYLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRL 251 (327)
T ss_dssp ECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTT-CEEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSE
T ss_pred ECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCC-CEEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeE
Confidence 766 211100 111223446666555433 378888899999988765432111000011111222212345
Q ss_pred eEEEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010769 408 CTISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 408 ~~l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
..+...... ..++..+..|.+.-+....
T Consensus 252 v~~~~~~~~-~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 252 VGALIVDDD-SELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp EEEEEECTT-CEEEEEEGGGCEEEEEGGG
T ss_pred EEEEEeCCC-ccEEEEcCCCeEEEEehhh
Confidence 444443333 4566667777777776543
No 375
>2m0n_A Putative uncharacterized protein; tuberculosis, structural genomics, seattle structural genomi for infectious disease, ssgcid; NMR {Mycobacterium abscessus}
Probab=45.53 E-value=17 Score=27.32 Aligned_cols=33 Identities=15% Similarity=0.253 Sum_probs=27.4
Q ss_pred eeeeccCCCCccCCcc----------cCCCCHHHHHHHHHcccc
Q 010769 4 AVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGAL 37 (502)
Q Consensus 4 ~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 37 (502)
.+.|++-||+.-+|.+ =.| +++|+.++...+..
T Consensus 13 ~v~WLRAGYPeGVP~~Dy~PLLALL~R~L-tdeEV~~Va~~L~~ 55 (112)
T 2m0n_A 13 EAQTQGPGSPEGVPPTDRFPLLALLRRTL-TEEQVQEVVAKLTD 55 (112)
T ss_dssp CCCCCTTSSCCSCCSCSCCGGGGCCCSSC-CHHHHHHHHHHHTC
T ss_pred hhhhHhccCCCCCCCCccHHHHHHhhccC-CHHHHHHHHHHHHh
Confidence 4789999999999987 279 99999997766543
No 376
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=43.51 E-value=42 Score=37.09 Aligned_cols=33 Identities=30% Similarity=0.331 Sum_probs=26.1
Q ss_pred CeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCe
Q 010769 406 AVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQP 439 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~ 439 (502)
.+.+++..++. .+++|-+.|+++|||++.+++.
T Consensus 239 ~~vs~~~~~~~-~~lftL~~D~~LRiWsl~t~~~ 271 (1139)
T 4fhn_B 239 TIISMIFLSTY-NVLVMLSLDYKLKVLDLSTNQC 271 (1139)
T ss_dssp CBSCCEEETTT-TEEEEEBTTCEEEEEETTTTEE
T ss_pred eeEEeeccCCc-cEEEEEeCCCEEEEEECCCCCe
Confidence 34455556655 8999999999999999999873
No 377
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=40.51 E-value=1.1e+02 Score=31.61 Aligned_cols=38 Identities=13% Similarity=0.173 Sum_probs=27.9
Q ss_pred CCeeEEEEcCCCCCEEEEEeCCCcEEEEECCCCCeeEEEEe
Q 010769 405 KAVCTISYNPLVPNLLATGSTDKMVKLWDLSNNQPSCIASR 445 (502)
Q Consensus 405 ~~v~~l~~sp~~~~~l~t~s~dg~i~vwd~~~~~~~~~~~~ 445 (502)
..|.++.+. ..+++|-+.|.++|+|++.+++.......
T Consensus 222 ~~Is~~~~~---~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLFH---ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEET---TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEeccC---CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 345655554 37999999999999999999984433333
No 378
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=38.46 E-value=1.1e+02 Score=30.98 Aligned_cols=59 Identities=14% Similarity=0.100 Sum_probs=38.4
Q ss_pred eeEEEEcCCCCCEEEEEeCC------------CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEE
Q 010769 407 VCTISYNPLVPNLLATGSTD------------KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAI 467 (502)
Q Consensus 407 v~~l~~sp~~~~~l~t~s~d------------g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llas 467 (502)
.-.|+|+|.| .+++.-..+ ..+.+.+..+++...+... +....++.++|+||++.|++.
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~-P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVG-PIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEEC-CTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeC-CCCccCcCeeECCCCCEEEEE
Confidence 3558999998 554443221 2355666666765444443 345789999999999976654
No 379
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=37.15 E-value=2.3e+02 Score=25.50 Aligned_cols=166 Identities=14% Similarity=0.055 Sum_probs=86.8
Q ss_pred cceeeEEecC--CCCcEEEEEecCCcEEEEECCC-------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEE
Q 010769 267 DSVLGLAWNK--EFRNILASASADKQVKIWDVAA-------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMK 337 (502)
Q Consensus 267 ~~V~~l~~~~--~~~~~l~sgs~Dg~v~vwd~~~-------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vw 337 (502)
..|.++...+ ....+++..+..|.++...+.. +.....+..+ +.+..+...... ..++..+..|.+..+
T Consensus 95 e~i~~~~~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~-d~lv~~~~~~~~-~~i~l~T~~G~~irf 172 (307)
T 1zi0_A 95 ERITAILPVTEFEEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG-DELIGVDLTSGE-DEVMLFSAEGKVVRF 172 (307)
T ss_dssp CCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT-CCEEEEEEECTT-CEEEEEETTSEEEEE
T ss_pred CEEEEEEEeccCCCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC-CEEEEEEEeCCC-CEEEEECCCCcEEEE
Confidence 4455554321 1134788899999999987641 2222334433 555555554444 467778888988888
Q ss_pred eCCCCCCc--------cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeE
Q 010769 338 DARISTHS--------GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCT 409 (502)
Q Consensus 338 d~~~~~~~--------~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~ 409 (502)
....-... .........|.++.....+. .+++.+..|.++-.++.................+....+.+..
T Consensus 173 ~~~~v~~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~-~ll~~T~~G~~Kr~~~~e~~~~~Rg~kG~~~~~~~~~~~~lv~ 251 (307)
T 1zi0_A 173 KESSVRAMGCNTTGVRGIRLGEGDKVVSLIVPRGDG-AILTATQNGYGKRTAVAEYPTKSRATKGVISIKVTERNGLVVG 251 (307)
T ss_dssp EGGGSCBCCTTCCCEECCCCCTTCCEEEEECCCSSC-EEEEEETTSEEEEECGGGSCCCCTTSCCEESSCCCTTTCSEEE
T ss_pred EHHHcCccCCCCCCeEeEEeCCCCEEEEEEEecCCC-EEEEEEcCCceEEEEHHHhccCCCCCCCEEeeEecCCCCeEEE
Confidence 76421111 11112234566665544333 6888899999998877543211100001112222222344544
Q ss_pred EEEcCCCCCEEEEEeCCCcEEEEECCC
Q 010769 410 ISYNPLVPNLLATGSTDKMVKLWDLSN 436 (502)
Q Consensus 410 l~~sp~~~~~l~t~s~dg~i~vwd~~~ 436 (502)
+...... .-|+..+.+|.+.-+.+..
T Consensus 252 ~~~v~~~-~~l~~~t~~g~~ir~~~~~ 277 (307)
T 1zi0_A 252 AVQVDDC-DQIMMITDAGTLVRTRVSE 277 (307)
T ss_dssp EEEECTT-CEEEEEESSCCEEEEEGGG
T ss_pred EEEeCCC-ceEEEEcCCCcEEEEeccc
Confidence 4443322 4455556667666665543
No 380
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=34.98 E-value=2.8e+02 Score=25.83 Aligned_cols=250 Identities=11% Similarity=0.079 Sum_probs=125.0
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
++..++++.+.+|.|+--.+...... ++..+......+. ..+.+..+..... ...|+..+
T Consensus 5 ~~e~~~v~lT~~GyIKr~~l~~y~~~------------------~r~g~g~~~~~lk-e~D~l~~~~~~~t-~d~ll~fT 64 (370)
T 3l6v_A 5 APEDVVVTLSHAGYAKRQPVSAYRAQ------------------RRGGRGRSAASTK-EEDFIDQLWLVNT-HDTLLTFT 64 (370)
T ss_dssp CCCCEEEEEESSCEEEEEEHHHHHHT------------------CCCCCCSEEEECS-CCCCEEEEEEECT-TCEEEEEE
T ss_pred cCCCEEEEEeCCCEEEEeeHHHhhhh------------------ccCCCCceecccC-CCCEEEEEEEecC-CCEEEEEe
Confidence 56779999999999987655321000 0000011111222 3456666655555 34566667
Q ss_pred cCCcEEEEE---CC------CCeeeEE---eccCCCCeEEEEEcC--CCCcEEEEEECCCcEEEEeCCCCCC------cc
Q 010769 287 ADKQVKIWD---VA------AGKCNLT---LEHHTDKVQAVAWNH--HSPQILLSGSFDRSVVMKDARISTH------SG 346 (502)
Q Consensus 287 ~Dg~v~vwd---~~------~~~~~~~---~~~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~------~~ 346 (502)
..|.+.-+. +. .|..+.. +. ....|.++.... ....+|+.++..|.++...+..... ..
T Consensus 65 ~~G~~~~~~~~eip~~~r~a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~a 143 (370)
T 3l6v_A 65 SSGKVFWLPVHQLPEAGSNARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIA 143 (370)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEES
T ss_pred CCCeEEEEEHHHCcCCCcccCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEE
Confidence 777765554 32 2232222 22 245666654432 1226899999999999887643221 11
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCC-----------
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPL----------- 415 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----------- 415 (502)
........+..+..... ...++..+..|.+..|....-..............+. ....|.++...+.
T Consensus 144 i~L~~~d~lv~v~~~~~-~~~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~~~~~~~~ 221 (370)
T 3l6v_A 144 INLDEGDALVGVALTDG-DRDVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLA-KGEEVVSLIVSERAGGVEDEVEDE 221 (370)
T ss_dssp SCCCTTCCEEEEEEECS-CCEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCC-TTCCEEEEEEECCC----------
T ss_pred EEeCCCCEEEEEEEeCC-CceEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeC-CCCEEEEEEEeccccccccccccc
Confidence 11122344544444432 3367788889998888765432111100011111121 2234444444331
Q ss_pred -----------------------CCCEEEEEeCCCcEEEEECCCCCe-----eEEE--EecCCCCCEEEEEEcCCCCcEE
Q 010769 416 -----------------------VPNLLATGSTDKMVKLWDLSNNQP-----SCIA--SRNPKAGAVFSVAFSEDSPFVL 465 (502)
Q Consensus 416 -----------------------~~~~l~t~s~dg~i~vwd~~~~~~-----~~~~--~~~~~~~~v~~~~~spd~~~ll 465 (502)
....|++.+..|..+...+..-.. .-+. .+....+.+..+.+..+...++
T Consensus 222 ~~~~~~~t~~g~~~~~~~~~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~d~i~ 301 (370)
T 3l6v_A 222 SAEEVVETTDGAEPAVIDVADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGSTDEVM 301 (370)
T ss_dssp -------------------------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTTCEEE
T ss_pred cccccccccccccccccccccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCCceEE
Confidence 225788999999999887654221 0111 2222234555554433333333
Q ss_pred EEEeCCCcEEEEECC
Q 010769 466 AIGGSKGKLEIWDTL 480 (502)
Q Consensus 466 asg~~dg~i~vwd~~ 480 (502)
..+..|.+.-..+.
T Consensus 302 -liT~~G~~iR~~v~ 315 (370)
T 3l6v_A 302 -LISDGGTLVRTRGS 315 (370)
T ss_dssp -EEETTCCEEEEEGG
T ss_pred -EEcCCCeEEEeeHh
Confidence 34566666555553
No 381
>2lky_A Uncharacterized protein; infectious disease, tuberculosis, DUF proteins, ssgcid, STRU genomics; NMR {Mycobacterium smegmatis str}
Probab=34.73 E-value=7.5 Score=29.20 Aligned_cols=33 Identities=21% Similarity=0.412 Sum_probs=27.8
Q ss_pred eeeeccCCCCccCCcc----------cCCCCHHHHHHHHHcccc
Q 010769 4 AVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGAL 37 (502)
Q Consensus 4 ~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~ 37 (502)
-+.|+..||+.-+|.+ -.| ++||+.++...+..
T Consensus 13 iv~WLRAGYP~GVP~~Dy~PLLALL~r~L-tdeev~~Va~~L~~ 55 (112)
T 2lky_A 13 IAAWLNAGYPEGVPGPDRVPLLALLTRRL-TNDEIKAIAEDLEK 55 (112)
T ss_dssp HHHHHHHHCSSCCCHHHHHHHHHHHTTTC-CHHHHHHHHHHHHH
T ss_pred HHHHHHccCCCCCCCcchHHHHHHHcccC-CHHHHHHHHHHHHH
Confidence 4789999999999987 489 99999997766643
No 382
>2kvc_A Putative uncharacterized protein; structural genomics, seattle structural genomi for infectious disease, ssgcid, unknown function; NMR {Mycobacterium tuberculosis}
Probab=33.78 E-value=7.6 Score=28.70 Aligned_cols=33 Identities=21% Similarity=0.488 Sum_probs=27.5
Q ss_pred ceeeeccCCCCccCCcc----------cCCCCHHHHHHHHHccc
Q 010769 3 AAVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGA 36 (502)
Q Consensus 3 ~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~ 36 (502)
|-+.|+..||+.-+|.+ -.| ++||+.++.....
T Consensus 10 siv~WLRaGYP~GVP~~Dy~PLlALL~r~L-tdeev~~Va~~L~ 52 (103)
T 2kvc_A 10 SIVAWLRAGYPEGIPPTDSFAVLALLCRRL-SHDEVKAVANELM 52 (103)
T ss_dssp HHHHHHHHHCTTCCCHHHHHHHHHHHTTTS-CHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCCCCCcchHHHHHHHhccC-CHHHHHHHHHHHH
Confidence 34789999999999987 389 9999999766654
No 383
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=32.07 E-value=2.9e+02 Score=24.98 Aligned_cols=104 Identities=13% Similarity=0.124 Sum_probs=64.5
Q ss_pred CcEEEEEecCCcEEEEECC-------CCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCc------
Q 010769 279 RNILASASADKQVKIWDVA-------AGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHS------ 345 (502)
Q Consensus 279 ~~~l~sgs~Dg~v~vwd~~-------~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~------ 345 (502)
...|+..+..|.++...+. .|.....+.. .+.+..+.....+ ..++..+..|.+..+....-...
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~-~~i~l~T~~G~~~r~~~~ev~~~gR~~~G 191 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKD-EKVICLSKKGSAFIFNSRDVRLTNRGTQG 191 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEEEGGGSCBCCTTBCC
T ss_pred CCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCC-CEEEEEeCCCcEEEEEHHHccccCCCCCC
Confidence 3467888999999988773 2333333443 4566666555444 56888889999988876531111
Q ss_pred --cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCC
Q 010769 346 --GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTA 385 (502)
Q Consensus 346 --~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~ 385 (502)
.........|..+.....+. .+++.+..|..+...+...
T Consensus 192 v~~i~L~~~d~vv~~~~v~~~~-~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 192 VCGMKLKEGDLFVKVLSVKENP-YLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp EECCCCCTTCCEEEEEECTTCS-EEEEEETTSEEEEEEGGGS
T ss_pred eEeEEeCCCCEEEEEEEECCCC-eEEEEECCCceEEEEHHHh
Confidence 11112234556655544333 5778889999999888644
No 384
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=32.04 E-value=1.9e+02 Score=29.01 Aligned_cols=65 Identities=14% Similarity=0.124 Sum_probs=41.4
Q ss_pred CeeEEEEcCCCCCEEE-EEeC-----------CCcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCCcEEEEEeCCC
Q 010769 406 AVCTISYNPLVPNLLA-TGST-----------DKMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSPFVLAIGGSKG 472 (502)
Q Consensus 406 ~v~~l~~sp~~~~~l~-t~s~-----------dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~~llasg~~dg 472 (502)
....|.|.++| .+.+ |=.. ...|..++..+++...+.. ......++.++|+||++.|+++.-.=|
T Consensus 477 sPDnL~fd~~G-~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~-~P~~aEpnGiafSPD~ktLfV~vQHPG 553 (592)
T 4a9v_A 477 SPDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMV-GPIGCEVTGISFSPDQKTLFVGIQHPG 553 (592)
T ss_dssp CEEEEEECTTC-CEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEE-CCTTCEEEEEEECTTSSEEEEEEESTT
T ss_pred CCCceEECCCC-CEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEe-CCCCccccCCEECCCCCEEEEEEeCCC
Confidence 35678999988 5444 4221 1257777777777544432 223456899999999997776654333
No 385
>3ol3_A Putative uncharacterized protein; tuberculosis, RV0543C, ortholog, iodide ION S phasing, structural genomics; HET: PG4 PGE; 1.95A {Mycobacterium smegmatis} PDB: 3ol4_A
Probab=31.07 E-value=8.5 Score=28.71 Aligned_cols=33 Identities=18% Similarity=0.412 Sum_probs=27.1
Q ss_pred ceeeeccCCCCccCCcc----------cCCCCHHHHHHHHHccc
Q 010769 3 AAVSWVPKGASKAVPEE----------AEPPSKEEIEEIINSGA 36 (502)
Q Consensus 3 ~~~~~~~~g~~~~~~~~----------~~~~~~~~~~~~~~~~~ 36 (502)
|-+.|+..||..-+|.+ =.| +++|+.++...+.
T Consensus 15 siv~WLRaGYPeGVP~~Dy~PLlALL~R~L-tddev~~Va~~L~ 57 (107)
T 3ol3_A 15 NVLGWLHKGYPEGVPPKDYFALLALLKRSL-TEDEVVRAAQAIL 57 (107)
T ss_dssp HHHHHHHHHCTTCBCGGGHHHHHHHHTCCC-CHHHHHHHHHHHH
T ss_pred HHHHHHHccCCCCCCCCccHHHHHHhcccC-CHHHHHHHHHHHH
Confidence 34789999999999987 279 9999999766553
No 386
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=27.38 E-value=3.2e+02 Score=24.09 Aligned_cols=165 Identities=17% Similarity=0.155 Sum_probs=89.3
Q ss_pred cceeeEEecCCCCcEEEEEecCCcEEEEECCCCeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEeCCCCCCcc
Q 010769 267 DSVLGLAWNKEFRNILASASADKQVKIWDVAAGKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKDARISTHSG 346 (502)
Q Consensus 267 ~~V~~l~~~~~~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~ 346 (502)
..|..++.... +.++ -. +|.|..|-....-.+..-......|..++..... .++ -. +|.|..|-........
T Consensus 102 ~~v~~ia~G~~--hs~a-l~-~G~v~~wG~n~~gqlg~~~~~~~~i~~i~~G~~~--~~~-l~-~G~v~~wG~n~~gqlg 173 (282)
T 3qhy_B 102 SGVDAIAAGAW--ASYA-LK-DGKVIAWGDDSDGQTTVPAEAQSGVTALDGGVYT--ALA-VK-NGGVIAWGDNYFGQTT 173 (282)
T ss_dssp SSEEEEEEETT--EEEE-EE-TTEEEEEECCTTSTTSCCGGGGSSEEEEEECSSE--EEE-EE-TTEEEEEECCTTSTTS
T ss_pred CCeEEEECcCC--EEEE-Ee-CCeEEEecCCCCCcCCCCccCCCCeEEEEcccCE--EEE-EE-CCEEEEecCCCCCCCC
Confidence 35777776654 2333 34 8999999865422111111123467777665432 233 34 7999999776533322
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........|..++.-.. +.++. .+|.|+.|-........ .+. .....|..++-... ..++.. +
T Consensus 174 ~p~~~~~~v~~i~~G~~--hs~al--~~G~v~~wG~n~~gqlg-----~p~----~~~~~v~~i~~G~~--h~~al~--~ 236 (282)
T 3qhy_B 174 VPAEAQSGVDDVAGGIF--HSLAL--KDGKVIAWGDNRYKQTT-----VPT----EALSGVSAIASGEW--YSLALK--N 236 (282)
T ss_dssp CCGGGGSSEEEEEECSS--EEEEE--ETTEEEEEECCTTSTTC-----CCG----GGGSSCCEEEECSS--CEEEEE--T
T ss_pred CceecCCCeEEEEecCC--EEEEE--ECCeEEEEECCCCCCCC-----CCc----ccCCCceEEEcCCC--EEEEEE--C
Confidence 11222456777776542 23444 59999999766542111 111 11235677765543 333333 9
Q ss_pred CcEEEEECCCCCeeEEEEecCCCCCEEEEEEcCCCC
Q 010769 427 KMVKLWDLSNNQPSCIASRNPKAGAVFSVAFSEDSP 462 (502)
Q Consensus 427 g~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~spd~~ 462 (502)
|.|+.|=.....+..+ ...|.+++......
T Consensus 237 g~v~~wG~n~~gq~~v------~~~v~~iaaG~~h~ 266 (282)
T 3qhy_B 237 GKVIAWGSSRTAPSSV------QSGVSSIEAGPNAA 266 (282)
T ss_dssp TEEEEESTTCCCCGGG------SSCEEEEEECSSCE
T ss_pred CEEEEecCCCCccccC------CCCcEEEEECcCeE
Confidence 9999997665442211 23466666665543
No 387
>4fp9_B Mterf domain-containing protein 2; modification enzyme, transferase; HET: SAM; 2.90A {Homo sapiens}
Probab=27.06 E-value=8.3 Score=35.84 Aligned_cols=7 Identities=43% Similarity=0.406 Sum_probs=2.9
Q ss_pred CHHHHHH
Q 010769 24 SKEEIEE 30 (502)
Q Consensus 24 ~~~~~~~ 30 (502)
+-+|++.
T Consensus 263 s~eey~~ 269 (335)
T 4fp9_B 263 SVEEFQV 269 (335)
T ss_dssp CHHHHHH
T ss_pred CHHHHHH
Confidence 3344444
No 388
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=24.12 E-value=3.7e+02 Score=23.69 Aligned_cols=163 Identities=15% Similarity=0.091 Sum_probs=90.1
Q ss_pred ccceeeEEecCC-CCcEEEEEecCCcEEEEECCC------CeeeEEeccCCCCeEEEEEcCCCCcEEEEEECCCcEEEEe
Q 010769 266 TDSVLGLAWNKE-FRNILASASADKQVKIWDVAA------GKCNLTLEHHTDKVQAVAWNHHSPQILLSGSFDRSVVMKD 338 (502)
Q Consensus 266 ~~~V~~l~~~~~-~~~~l~sgs~Dg~v~vwd~~~------~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd 338 (502)
...|..+.. ++ ...+++..+..|.|+...+.. +.....++. .+.+..+...... ..++..+..|.+..+.
T Consensus 67 ~e~i~~v~~-~~~~~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lke-gD~l~~~~~~~~~-~~ill~T~~G~~~r~~ 143 (276)
T 3no0_A 67 EEKIVGAFI-REKFGNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTE-GDEVVSIASSVDE-THILLFTKKGRVARFS 143 (276)
T ss_dssp TCCEEEEEE-GGGSCSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCT-TCCEEEEEECCSS-CEEEEEETTSEEEEEE
T ss_pred CCEEEEEEC-CcCCCCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCC-CCEEEEEEEeCCC-CEEEEEECCCEEEEEE
Confidence 345555543 31 245889999999999988654 222233332 3456666555444 5788888899988887
Q ss_pred CCCCCCc--------cceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEE
Q 010769 339 ARISTHS--------GFKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTI 410 (502)
Q Consensus 339 ~~~~~~~--------~~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 410 (502)
...-... .........|..+...+.+ ..++..+..|.++...+......... .+-+..+ .....+..+
T Consensus 144 ~~eip~~gR~a~Gv~~i~L~~~d~vv~~~~~~~~-~~ll~~T~~G~~kr~~~~e~~~~~R~--gkGv~~i-~~~~~lv~~ 219 (276)
T 3no0_A 144 VREVPPSTPGARGVQGIKLEKNDETSGLRIWNGE-PYLLVITAKGRVKKISHEEIPKTNRG--VKGTEVS-GTKDTLVDL 219 (276)
T ss_dssp GGGSCBCCTTCCCEECCCCCTTCCEEEEEEESSC-SEEEEEETTSCEEEEEGGGSCCCCTT--CCCEECC-CSSSCEEEE
T ss_pred hhhCCCcCCCCCCEEEEccCCCCEEEEEEEeCCC-CEEEEEeCCCcEEEeEHHHcccCCCC--CcceEEE-cCCCcEEEE
Confidence 5421110 0111223445555443333 37888889999998887654221111 1122222 223445544
Q ss_pred EEcCCCCCEEEEEeCCCcEEE--EECCC
Q 010769 411 SYNPLVPNLLATGSTDKMVKL--WDLSN 436 (502)
Q Consensus 411 ~~sp~~~~~l~t~s~dg~i~v--wd~~~ 436 (502)
...... ..++..+..|.+.. ++...
T Consensus 220 ~~~~~~-~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 220 IPIKEE-VELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEESSE-EEEEEEETTSCEEEEEEEGGG
T ss_pred EEeCCC-CEEEEEcCCCeEEEeeeCHHH
Confidence 333322 45666777787777 76544
No 389
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=23.87 E-value=4.5e+02 Score=24.59 Aligned_cols=117 Identities=9% Similarity=0.043 Sum_probs=65.5
Q ss_pred cceeeEEec---CC----CCcEEEEEecCCcEEEEECCCCeeeEEecc----C--------------CCCeEEEEEcCC-
Q 010769 267 DSVLGLAWN---KE----FRNILASASADKQVKIWDVAAGKCNLTLEH----H--------------TDKVQAVAWNHH- 320 (502)
Q Consensus 267 ~~V~~l~~~---~~----~~~~l~sgs~Dg~v~vwd~~~~~~~~~~~~----h--------------~~~v~~l~~~~~- 320 (502)
..+..+.+. |. +....++=+..+.|.|+|+.+++.-+.+.. . ...|..|+.+|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456777776 21 232334444577899999998876544310 0 246778888887
Q ss_pred ---CCcEEEEEECCC-cEEEEe---CCCCCCc--cceEeec---CCeEEEEeCCCCCCEEEEEeCCCeEEEEECCC
Q 010769 321 ---SPQILLSGSFDR-SVVMKD---ARISTHS--GFKWAVA---ADVESLAWDPHAEHSFVVSLEDGTIKGFDIRT 384 (502)
Q Consensus 321 ---~~~~l~s~~~dg-~i~vwd---~~~~~~~--~~~~~~~---~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~ 384 (502)
+ +.|.-....+ .+.-.. ++..... ....+.. +....++..+..+.++++--....|..|+..+
T Consensus 232 ~~~~-~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 232 SEGN-RPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp TTSC-CEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred CCCC-eEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 4 4555554443 333322 2222211 1122223 23445667643455677777888999999875
No 390
>3nzj_F Proteasome component C1; ubiquitin, protein degradation, N-terminal nucleophilic HYDR 19S regulatory particle; HET: TY5 TRO MES; 2.40A {Saccharomyces cerevisiae} PDB: 1z7q_G* 3nzw_F* 3nzx_F* 3un4_F* 3un8_F* 4b4t_G 4g4s_G* 3bdm_F* 1fnt_G* 2zcy_F*
Probab=21.98 E-value=33 Score=31.02 Aligned_cols=34 Identities=12% Similarity=0.015 Sum_probs=15.3
Q ss_pred eeeccCCCCccCCcccCCCCHHHHHHHHHccccccccc
Q 010769 5 VSWVPKGASKAVPEEAEPPSKEEIEEIINSGALEHEIE 42 (502)
Q Consensus 5 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 42 (502)
++||-+.- ..-....+ .++++++ .++.++..+++
T Consensus 216 v~vIt~~~--~~~~~~~v-p~~~~~~-~~~~~~~~~~~ 249 (288)
T 3nzj_F 216 ISWCSLSE--TNGLHKFV-KGDLLQE-AIDFAQKEING 249 (288)
T ss_dssp EEEEETTT--STTCCEEC-CHHHHHH-HHHHHHHHTC-
T ss_pred EEEEEecC--CCceEEEC-CHHHHHH-HHHHHHHHhhc
Confidence 67877611 11122334 4455555 44445555444
No 391
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=20.68 E-value=4.8e+02 Score=23.66 Aligned_cols=246 Identities=8% Similarity=0.042 Sum_probs=124.4
Q ss_pred CCCCEEEEecCCCcEEEeeCCCCCCCCceeeeCCcchhhhhhccccCCccccccccCCcccceeeEEecCCCCcEEEEEe
Q 010769 207 EKGNFMAVGSMEPAIEIWDLDVIDEVQPHVILGGIDEEKKKKKSKKGKKSSIKYKKGSHTDSVLGLAWNKEFRNILASAS 286 (502)
Q Consensus 207 ~~~~~la~g~~dg~I~iwdl~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~l~~~~~~~~~l~sgs 286 (502)
|+..++++.+.+|.|+--.+...... ......+.. .+.+..+..... ...|+..+
T Consensus 3 ~~e~~~v~lT~~G~IKr~~~~~~~~~-----------------------~~~~~~lke-~D~l~~~~~~~t-~d~ll~fT 57 (323)
T 1wp5_A 3 ASEDVIVTVTKDGYVKRTSLRSYAAS-----------------------NGQDFAMKD-TDRLLAMLEMNT-KDVLLLFT 57 (323)
T ss_dssp SCCEEEEEEETTCEEEEEEHHHHHHT-----------------------TTCCCCCCT-TCCEEEEEEEET-TSEEEEEE
T ss_pred cCCcEEEEEeCCCEEEEeEHHHhhhc-----------------------CccccccCC-CCEEEEEEEECC-CCEEEEEE
Confidence 45678889999999987655321000 000111222 244544444444 34566677
Q ss_pred cCCcEEEEEC---C------CCeeeEEe-cc-CCCCeEEEEEcCC--CCcEEEEEECCCcEEEEeCCCCCC-------cc
Q 010769 287 ADKQVKIWDV---A------AGKCNLTL-EH-HTDKVQAVAWNHH--SPQILLSGSFDRSVVMKDARISTH-------SG 346 (502)
Q Consensus 287 ~Dg~v~vwd~---~------~~~~~~~~-~~-h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~-------~~ 346 (502)
..|.+.-... . .|.++..+ .. ....|.++...+. ...+++.++..|.++...+..-.. ..
T Consensus 58 ~~Gr~~~~~~~elp~~~r~a~G~~i~~~i~L~~~e~Iv~~~~~~~~~~~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~a 137 (323)
T 1wp5_A 58 NKGNYLYCPVHELPDIRWKDLGQHIANIIPIDRDEEIIKAIPINDFELNGYFLFVTRNGMVKKTELKHYKAQRYSKPLTG 137 (323)
T ss_dssp TTSEEEEEEGGGSCBCCTTSCCEEGGGTSCCCTTCCEEEEEEESCTTSSCEEEEEETTSEEEEEEGGGGCCSCCSSCEEC
T ss_pred CCCEEEEEEHHHCcCCCCCCCCcChhhccCCCCCCEEEEEEEecccCCCceEEEEeCCCeEEEeEHHHhhhccccCceEE
Confidence 7787655543 2 23322221 11 2345665533332 125788899999999987742211 11
Q ss_pred ceEeecCCeEEEEeCCCCCCEEEEEeCCCeEEEEECCCCCCCCCCCCCCccEEEecCCCCeeEEEEcCCCCCEEEEEeCC
Q 010769 347 FKWAVAADVESLAWDPHAEHSFVVSLEDGTIKGFDIRTAKSDPDSTSQQSSFTLHAHDKAVCTISYNPLVPNLLATGSTD 426 (502)
Q Consensus 347 ~~~~~~~~v~~v~~~p~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~t~s~d 426 (502)
........+..+..... ...++..+.+|.+..+....-..............+. ....|.++...+.+...|++.+..
T Consensus 138 i~l~e~d~lv~~~~~~~-~~~i~l~T~~G~~irf~~~ev~~~gR~a~GV~~i~L~-~~d~Vv~~~~~~~~~~~ll~vt~~ 215 (323)
T 1wp5_A 138 INLKNDDQVVDVHLTDG-MNELFLVTHNGYALWFDESEVSIVGVRAAGVKGMNLK-EGDYIVSGQLITSKDESIVVATQR 215 (323)
T ss_dssp SCCCTTCCEEEEEEECS-CSEEEEEETTSEEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEECCTTCEEEEEETT
T ss_pred EEeCCCCEEEEEEEeCC-CCEEEEEeCCCcEEEEEHHHCcccCCCCcCEEEEEeC-CCCEEEEEEEEcCCCcEEEEEECC
Confidence 11222344555444432 3367888889999888875432111100011112222 234466665444442278888889
Q ss_pred CcEEEEECCCCCe-----eEEEEe---cCCCCCEEEE-EEcCCCCcEEEEEeCCCcEEEEECCC
Q 010769 427 KMVKLWDLSNNQP-----SCIASR---NPKAGAVFSV-AFSEDSPFVLAIGGSKGKLEIWDTLS 481 (502)
Q Consensus 427 g~i~vwd~~~~~~-----~~~~~~---~~~~~~v~~~-~~spd~~~llasg~~dg~i~vwd~~~ 481 (502)
|..+..++..-.. .-+... ......+..+ .+.++.. ++..+..|.+....+..
T Consensus 216 G~gKr~~~~e~~~~~Rg~kGv~~~~~~~~~~~~l~~~~~v~~~~~--i~~it~~g~~ir~~~~~ 277 (323)
T 1wp5_A 216 GAVKKMKLTEFEKATRAKRGVVILRELKANPHRISGFVVAQDSDT--IYLQTEKSFIETIKVGD 277 (323)
T ss_dssp SEEEEEEGGGSCCCCTTSCCEECSCCCSSSCCCEEEEEEECTTCE--EEEEETTSCEEEEEGGG
T ss_pred CceEEEEHHHccccCCCCCCEECeeecCCCCceEEEEEEeCCCCe--EEEEeCCCeEEEEEhhh
Confidence 9988877654110 011111 1122245533 3444443 44556777776667654
Done!