Query 010770
Match_columns 501
No_of_seqs 349 out of 2479
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 13:53:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010770.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010770hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zgk_A Kelch-like ECH-associat 100.0 3E-46 1E-50 369.1 31.8 288 13-342 8-299 (308)
2 2xn4_A Kelch-like protein 2; s 100.0 6.7E-44 2.3E-48 351.0 36.3 270 28-337 14-283 (302)
3 3ii7_A Kelch-like protein 7; p 100.0 6.4E-44 2.2E-48 351.8 33.0 272 31-342 12-284 (306)
4 2vpj_A Kelch-like protein 12; 100.0 7.9E-44 2.7E-48 350.2 31.8 267 31-337 15-285 (301)
5 2xn4_A Kelch-like protein 2; s 100.0 1.1E-42 3.8E-47 342.3 33.2 261 2-304 40-302 (302)
6 1zgk_A Kelch-like ECH-associat 100.0 3.3E-42 1.1E-46 340.2 32.3 256 2-300 49-308 (308)
7 3ii7_A Kelch-like protein 7; p 100.0 8.4E-42 2.9E-46 336.7 31.6 257 2-302 34-295 (306)
8 2vpj_A Kelch-like protein 12; 100.0 1.3E-41 4.3E-46 334.5 32.4 257 2-301 41-300 (301)
9 2uvk_A YJHT; unknown function, 100.0 8.7E-42 3E-46 344.0 29.6 287 15-336 5-348 (357)
10 4asc_A Kelch repeat and BTB do 100.0 4.6E-42 1.6E-46 340.1 23.7 271 2-309 23-305 (315)
11 2woz_A Kelch repeat and BTB do 100.0 2.9E-41 1E-45 334.8 25.7 271 2-309 34-315 (318)
12 4asc_A Kelch repeat and BTB do 100.0 5.7E-41 2E-45 332.2 27.7 261 31-336 5-283 (315)
13 2woz_A Kelch repeat and BTB do 100.0 1.9E-40 6.5E-45 329.0 30.6 271 17-336 6-293 (318)
14 2zwa_A Leucine carboxyl methyl 100.0 2.5E-38 8.6E-43 345.1 26.2 286 15-324 384-692 (695)
15 2uvk_A YJHT; unknown function, 100.0 6.2E-36 2.1E-40 301.2 25.2 253 2-285 43-351 (357)
16 2zwa_A Leucine carboxyl methyl 100.0 2.4E-33 8.3E-38 305.8 26.7 238 73-336 385-641 (695)
17 1k3i_A Galactose oxidase precu 100.0 9.9E-32 3.4E-36 292.2 28.4 277 3-311 177-531 (656)
18 1k3i_A Galactose oxidase precu 100.0 3.5E-28 1.2E-32 264.3 20.9 263 47-345 167-512 (656)
19 3mbr_X Glutamine cyclotransfer 97.8 0.0085 2.9E-07 55.5 23.3 190 77-309 21-223 (243)
20 3dsm_A Uncharacterized protein 97.7 0.022 7.5E-07 55.2 27.0 230 45-324 16-251 (328)
21 3dsm_A Uncharacterized protein 97.6 0.0081 2.8E-07 58.4 21.3 207 23-277 87-303 (328)
22 3nol_A Glutamine cyclotransfer 97.4 0.03 1E-06 52.3 21.5 187 80-309 46-244 (262)
23 3v9f_A Two-component system se 97.2 0.035 1.2E-06 60.7 22.1 215 47-312 428-648 (781)
24 4ery_A WD repeat-containing pr 97.1 0.19 6.6E-06 47.5 24.5 225 29-313 33-260 (312)
25 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.25 8.5E-06 48.3 27.8 209 26-308 99-325 (376)
26 3mbr_X Glutamine cyclotransfer 97.1 0.023 7.8E-07 52.6 16.6 140 131-308 25-166 (243)
27 3nok_A Glutaminyl cyclase; bet 97.1 0.044 1.5E-06 51.3 18.4 184 80-309 58-254 (268)
28 4a2l_A BT_4663, two-component 97.0 0.046 1.6E-06 59.9 21.5 213 48-312 429-651 (795)
29 3q7m_A Lipoprotein YFGL, BAMB; 97.0 0.15 5.3E-06 49.8 23.3 206 31-308 144-366 (376)
30 1l0q_A Surface layer protein; 97.0 0.063 2.2E-06 52.6 20.4 187 31-282 2-195 (391)
31 4aez_A CDC20, WD repeat-contai 96.9 0.089 3.1E-06 52.1 20.3 209 47-312 157-371 (401)
32 2iwa_A Glutamine cyclotransfer 96.8 0.32 1.1E-05 45.6 22.5 202 23-277 24-238 (266)
33 2iwa_A Glutamine cyclotransfer 96.8 0.33 1.1E-05 45.5 22.8 191 80-312 24-228 (266)
34 2hqs_A Protein TOLB; TOLB, PAL 96.7 0.16 5.6E-06 50.8 21.0 223 46-324 159-385 (415)
35 1k8k_C P40, ARP2/3 complex 41 96.7 0.37 1.3E-05 46.4 23.1 115 25-164 14-129 (372)
36 1rwi_B Serine/threonine-protei 96.7 0.28 9.5E-06 45.1 21.0 221 23-309 27-252 (270)
37 1gxr_A ESG1, transducin-like e 96.6 0.31 1.1E-05 46.1 21.6 219 29-313 107-329 (337)
38 3nol_A Glutamine cyclotransfer 96.6 0.037 1.3E-06 51.7 14.0 137 134-307 49-187 (262)
39 3ow8_A WD repeat-containing pr 96.5 0.58 2E-05 44.7 23.0 218 32-313 93-313 (321)
40 1l0q_A Surface layer protein; 96.5 0.12 4E-06 50.7 18.3 186 31-279 44-236 (391)
41 3v9f_A Two-component system se 96.5 0.17 5.7E-06 55.3 20.9 224 28-308 371-600 (781)
42 2hqs_A Protein TOLB; TOLB, PAL 96.5 0.17 5.9E-06 50.6 19.5 203 30-284 189-395 (415)
43 1q7f_A NHL, brain tumor CG1071 96.5 0.55 1.9E-05 43.6 24.5 230 24-308 34-268 (286)
44 4ery_A WD repeat-containing pr 96.4 0.62 2.1E-05 43.8 25.0 193 30-278 76-270 (312)
45 2ojh_A Uncharacterized protein 96.4 0.18 6.2E-06 46.5 17.9 190 44-284 20-214 (297)
46 3jrp_A Fusion protein of prote 96.4 0.14 4.9E-06 49.4 17.6 110 29-163 21-135 (379)
47 1p22_A F-BOX/WD-repeat protein 96.4 0.74 2.5E-05 45.9 23.3 216 30-313 142-357 (435)
48 3bws_A Protein LP49; two-domai 96.3 0.8 2.7E-05 45.3 23.1 200 30-280 133-338 (433)
49 3vgz_A Uncharacterized protein 96.3 0.81 2.8E-05 43.6 25.8 226 31-310 53-292 (353)
50 3bws_A Protein LP49; two-domai 96.2 0.34 1.2E-05 48.0 19.6 206 29-282 179-396 (433)
51 3ow8_A WD repeat-containing pr 96.1 0.77 2.6E-05 43.8 21.1 178 86-313 91-271 (321)
52 2z2n_A Virginiamycin B lyase; 96.1 0.86 2.9E-05 42.2 25.0 220 24-308 61-283 (299)
53 3zwl_B Eukaryotic translation 96.1 0.74 2.5E-05 43.9 21.0 110 29-163 42-152 (369)
54 2xbg_A YCF48-like protein; pho 96.0 1.1 3.8E-05 43.0 22.1 239 2-309 25-268 (327)
55 2xdw_A Prolyl endopeptidase; a 96.0 0.49 1.7E-05 50.8 21.3 217 29-283 134-376 (710)
56 3nok_A Glutaminyl cyclase; bet 96.0 0.099 3.4E-06 48.9 13.3 133 134-307 61-196 (268)
57 1gxr_A ESG1, transducin-like e 96.0 0.68 2.3E-05 43.6 20.1 222 28-312 60-287 (337)
58 4a2l_A BT_4663, two-component 95.9 0.74 2.5E-05 50.2 22.3 226 28-308 365-603 (795)
59 3jro_A Fusion protein of prote 95.9 0.1 3.5E-06 56.8 15.0 109 30-163 20-133 (753)
60 2ovr_B FBW7, F-BOX/WD repeat p 95.9 1.2 4.1E-05 44.3 22.1 175 86-312 208-382 (445)
61 4gga_A P55CDC, cell division c 95.9 0.71 2.4E-05 45.8 20.2 213 47-313 170-387 (420)
62 2xdw_A Prolyl endopeptidase; a 95.9 0.72 2.5E-05 49.5 21.6 212 43-285 95-332 (710)
63 1r5m_A SIR4-interacting protei 95.8 1.1 3.6E-05 43.8 21.2 220 29-312 118-352 (425)
64 2z2n_A Virginiamycin B lyase; 95.8 1.2 4E-05 41.2 24.0 220 23-308 18-242 (299)
65 1pjx_A Dfpase, DIISOPROPYLFLUO 95.7 0.63 2.2E-05 43.7 18.4 132 23-168 21-167 (314)
66 2ojh_A Uncharacterized protein 95.7 0.21 7.2E-06 46.0 14.5 212 28-284 50-266 (297)
67 3vgz_A Uncharacterized protein 95.6 1.6 5.6E-05 41.3 27.8 211 24-282 93-309 (353)
68 1vyh_C Platelet-activating fac 95.6 0.99 3.4E-05 44.7 19.9 108 29-166 118-227 (410)
69 3ott_A Two-component system se 95.5 1.2 4.2E-05 48.2 21.8 226 29-312 382-618 (758)
70 1kb0_A Quinohemoprotein alcoho 95.5 3 0.0001 44.6 24.4 125 26-169 74-208 (677)
71 3g4e_A Regucalcin; six bladed 95.5 1.4 4.7E-05 41.4 19.6 233 21-312 14-264 (297)
72 3zwl_B Eukaryotic translation 95.4 1.2 4E-05 42.5 19.4 112 30-162 85-206 (369)
73 2ovr_B FBW7, F-BOX/WD repeat p 95.4 2.4 8.2E-05 42.1 25.0 210 46-313 219-430 (445)
74 2xbg_A YCF48-like protein; pho 95.4 2 6.8E-05 41.2 22.8 216 30-308 89-310 (327)
75 2dg1_A DRP35, lactonase; beta 95.3 1.9 6.3E-05 40.9 20.3 128 24-169 49-178 (333)
76 3mkq_A Coatomer beta'-subunit; 95.3 0.93 3.2E-05 49.0 20.1 107 29-163 23-129 (814)
77 1nir_A Nitrite reductase; hemo 95.3 0.51 1.8E-05 49.1 17.1 152 102-285 248-416 (543)
78 2bkl_A Prolyl endopeptidase; m 95.3 1 3.5E-05 48.2 20.0 232 43-309 91-337 (695)
79 3hfq_A Uncharacterized protein 95.2 1.2 4.2E-05 42.5 18.7 97 47-161 19-116 (347)
80 2z3z_A Dipeptidyl aminopeptida 95.2 1.2 4E-05 47.5 20.1 159 102-284 235-399 (706)
81 3dwl_C Actin-related protein 2 95.2 0.16 5.3E-06 49.5 12.2 111 29-164 21-133 (377)
82 4gqb_B Methylosome protein 50; 95.1 1.4 4.9E-05 42.5 19.0 177 86-313 138-323 (344)
83 4g56_B MGC81050 protein; prote 95.1 0.89 3E-05 44.1 17.5 178 86-313 150-335 (357)
84 3azo_A Aminopeptidase; POP fam 95.1 0.75 2.6E-05 48.7 18.2 198 45-284 160-377 (662)
85 1got_B GT-beta; complex (GTP-b 95.1 2.4 8.3E-05 40.5 22.6 177 86-313 154-335 (340)
86 2z3z_A Dipeptidyl aminopeptida 95.0 0.89 3E-05 48.5 18.7 195 45-278 234-437 (706)
87 2qc5_A Streptogramin B lactona 95.0 2.2 7.4E-05 39.3 24.3 219 24-308 66-289 (300)
88 3scy_A Hypothetical bacterial 94.9 2.5 8.5E-05 40.5 20.1 112 32-162 14-129 (361)
89 1k8k_C P40, ARP2/3 complex 41 94.9 2.7 9.4E-05 40.0 24.1 110 28-161 61-172 (372)
90 3u4y_A Uncharacterized protein 94.9 2.3 7.7E-05 40.1 19.3 193 32-283 53-259 (331)
91 3e5z_A Putative gluconolactona 94.8 1.3 4.5E-05 41.3 17.3 197 25-278 74-288 (296)
92 1vyh_C Platelet-activating fac 94.7 2.3 8E-05 41.9 19.7 67 86-166 203-269 (410)
93 1qhu_A Protein (hemopexin); be 94.7 0.96 3.3E-05 45.8 16.6 59 30-112 158-216 (460)
94 2qc5_A Streptogramin B lactona 94.7 2.6 8.9E-05 38.8 25.3 221 23-308 23-247 (300)
95 3v7d_B Cell division control p 94.7 3.8 0.00013 40.7 24.3 104 32-164 133-238 (464)
96 1ri6_A Putative isomerase YBHE 94.7 2.2 7.4E-05 40.2 18.7 104 31-161 5-114 (343)
97 3fm0_A Protein CIAO1; WDR39,SG 94.6 1.5 5.2E-05 42.1 17.6 158 28-225 25-187 (345)
98 2ecf_A Dipeptidyl peptidase IV 94.6 1.4 4.7E-05 47.2 18.8 214 28-284 117-376 (741)
99 3e5z_A Putative gluconolactona 94.6 1.3 4.4E-05 41.3 16.6 208 21-283 29-253 (296)
100 1rwi_B Serine/threonine-protei 94.6 1.9 6.4E-05 39.3 17.3 191 24-276 71-264 (270)
101 2ecf_A Dipeptidyl peptidase IV 94.5 1.7 5.9E-05 46.5 19.4 129 24-169 41-188 (741)
102 2bkl_A Prolyl endopeptidase; m 94.5 0.68 2.3E-05 49.6 16.1 214 29-282 130-357 (695)
103 1r5m_A SIR4-interacting protei 94.5 3.8 0.00013 39.7 22.9 68 86-168 119-186 (425)
104 3hfq_A Uncharacterized protein 94.4 2.7 9.2E-05 40.0 18.8 124 25-168 45-178 (347)
105 3iuj_A Prolyl endopeptidase; h 94.4 1.6 5.4E-05 46.8 18.6 211 29-283 138-366 (693)
106 1sq9_A Antiviral protein SKI8; 94.4 3 0.0001 40.3 19.3 32 130-167 190-221 (397)
107 2ad6_A Methanol dehydrogenase 94.3 5.8 0.0002 41.3 22.6 121 30-168 62-193 (571)
108 1yr2_A Prolyl oligopeptidase; 94.3 1.1 3.7E-05 48.4 17.2 215 29-283 172-402 (741)
109 2pbi_B Guanine nucleotide-bind 94.3 4 0.00014 39.3 20.8 165 103-312 177-348 (354)
110 3fvz_A Peptidyl-glycine alpha- 94.3 3.8 0.00013 38.9 27.7 227 46-310 69-311 (329)
111 3vl1_A 26S proteasome regulato 94.1 2.5 8.4E-05 41.4 18.1 65 86-164 108-172 (420)
112 3mkq_A Coatomer beta'-subunit; 94.0 7.1 0.00024 42.0 23.2 108 29-164 65-174 (814)
113 3v7d_B Cell division control p 94.0 5.3 0.00018 39.7 26.3 178 84-312 277-454 (464)
114 3jrp_A Fusion protein of prote 94.0 0.91 3.1E-05 43.5 14.5 71 86-169 22-95 (379)
115 3azo_A Aminopeptidase; POP fam 94.0 1.5 5.3E-05 46.2 17.4 205 45-284 101-333 (662)
116 3c5m_A Oligogalacturonate lyas 94.0 0.62 2.1E-05 45.2 13.3 209 46-283 168-391 (396)
117 4g56_B MGC81050 protein; prote 93.9 0.57 2E-05 45.5 12.8 123 28-167 51-175 (357)
118 2aq5_A Coronin-1A; WD40 repeat 93.9 3.4 0.00012 40.3 18.7 113 30-167 93-212 (402)
119 3u4y_A Uncharacterized protein 93.9 3.6 0.00012 38.6 18.4 133 30-195 9-147 (331)
120 3vl1_A 26S proteasome regulato 93.9 5.1 0.00017 39.0 24.0 109 29-166 107-216 (420)
121 1pjx_A Dfpase, DIISOPROPYLFLUO 93.9 4.1 0.00014 37.9 19.3 200 25-277 76-300 (314)
122 1pgu_A Actin interacting prote 93.8 3.2 0.00011 42.7 19.3 232 30-312 77-319 (615)
123 1sq9_A Antiviral protein SKI8; 93.7 2.6 9E-05 40.7 17.4 112 25-162 21-157 (397)
124 1p22_A F-BOX/WD-repeat protein 93.7 2.4 8.1E-05 42.1 17.3 178 82-313 138-317 (435)
125 1ri6_A Putative isomerase YBHE 93.5 4.1 0.00014 38.1 18.0 101 46-167 60-166 (343)
126 1got_B GT-beta; complex (GTP-b 93.5 5.3 0.00018 38.0 23.4 222 29-312 65-292 (340)
127 1pgu_A Actin interacting prote 93.5 5.1 0.00017 41.2 20.0 112 24-159 23-148 (615)
128 3ei3_B DNA damage-binding prot 93.4 2.8 9.7E-05 40.4 17.0 112 32-168 87-200 (383)
129 3no2_A Uncharacterized protein 93.4 5 0.00017 37.3 23.9 213 31-308 5-230 (276)
130 1jmx_B Amine dehydrogenase; ox 93.3 2.9 9.9E-05 39.4 16.6 116 30-164 10-136 (349)
131 2ynn_A Coatomer subunit beta'; 93.3 5.2 0.00018 37.3 20.8 107 29-163 23-129 (304)
132 4e54_B DNA damage-binding prot 93.2 0.82 2.8E-05 45.6 12.9 109 30-163 131-241 (435)
133 1yr2_A Prolyl oligopeptidase; 93.1 4.9 0.00017 43.2 19.7 211 43-285 130-361 (741)
134 3pe7_A Oligogalacturonate lyas 92.7 1.2 4E-05 43.2 13.0 110 46-169 168-280 (388)
135 4ggc_A P55CDC, cell division c 92.7 6.1 0.00021 36.5 21.0 56 243-313 251-307 (318)
136 3fm0_A Protein CIAO1; WDR39,SG 92.6 3 0.0001 40.0 15.6 186 86-313 27-217 (345)
137 2pm9_A Protein WEB1, protein t 92.6 5.5 0.00019 38.6 17.9 185 87-312 126-328 (416)
138 2pm7_B Protein transport prote 92.5 6.6 0.00023 36.5 18.2 109 29-163 19-133 (297)
139 2hes_X YDR267CP; beta-propelle 92.5 6.9 0.00024 37.0 18.0 71 86-169 118-191 (330)
140 4a11_B DNA excision repair pro 92.4 5.7 0.00019 38.2 17.5 105 30-164 111-220 (408)
141 1nir_A Nitrite reductase; hemo 92.4 2.9 9.9E-05 43.3 16.0 204 46-279 248-461 (543)
142 4aez_A CDC20, WD repeat-contai 92.3 8.8 0.0003 37.3 20.7 182 46-281 113-298 (401)
143 1qks_A Cytochrome CD1 nitrite 92.2 7.2 0.00024 40.6 18.7 164 86-285 255-435 (567)
144 4aow_A Guanine nucleotide-bind 92.1 7.7 0.00026 36.2 20.0 137 29-197 96-236 (340)
145 1qhu_A Protein (hemopexin); be 91.8 12 0.00041 37.7 19.8 59 86-163 158-216 (460)
146 3sfz_A APAF-1, apoptotic pepti 91.6 15 0.0005 41.9 22.1 111 29-167 625-737 (1249)
147 3dwl_C Actin-related protein 2 91.5 1.4 4.6E-05 42.6 11.6 70 86-168 22-93 (377)
148 3jro_A Fusion protein of prote 91.4 1.3 4.5E-05 47.9 12.5 96 86-197 20-122 (753)
149 1erj_A Transcriptional repress 91.4 11 0.00038 36.6 23.9 108 29-166 133-242 (393)
150 2gop_A Trilobed protease; beta 91.1 9.1 0.00031 36.0 17.1 195 44-284 41-259 (347)
151 2dg1_A DRP35, lactonase; beta 91.1 3.8 0.00013 38.6 14.3 156 86-276 55-213 (333)
152 1xfd_A DIP, dipeptidyl aminope 91.0 7.5 0.00026 41.2 18.0 81 26-119 67-151 (723)
153 4gqb_B Methylosome protein 50; 90.7 3.5 0.00012 39.7 13.7 155 83-278 89-248 (344)
154 1q7f_A NHL, brain tumor CG1071 90.7 9.8 0.00034 34.8 23.9 179 29-251 87-268 (286)
155 3g4e_A Regucalcin; six bladed 90.6 11 0.00036 35.1 18.1 176 46-253 73-262 (297)
156 3dr2_A Exported gluconolactona 90.6 4.9 0.00017 37.7 14.3 153 47-226 108-274 (305)
157 3mmy_A MRNA export factor; mRN 90.4 12 0.0004 35.2 17.7 106 31-164 54-162 (368)
158 4a11_B DNA excision repair pro 90.3 9.1 0.00031 36.7 16.5 29 133-166 252-280 (408)
159 2vdu_B TRNA (guanine-N(7)-)-me 90.3 15 0.00052 36.3 20.1 67 87-167 210-276 (450)
160 3ott_A Two-component system se 90.3 22 0.00075 38.1 23.8 195 26-284 69-268 (758)
161 3i2n_A WD repeat-containing pr 90.0 5.9 0.0002 37.3 14.5 107 32-164 32-150 (357)
162 2fp8_A Strictosidine synthase; 89.9 13 0.00044 34.9 19.8 212 23-277 83-314 (322)
163 1yfq_A Cell cycle arrest prote 89.9 13 0.00043 34.7 18.2 105 29-162 21-131 (342)
164 4aow_A Guanine nucleotide-bind 89.9 12 0.00042 34.7 16.8 65 86-164 97-161 (340)
165 3sfz_A APAF-1, apoptotic pepti 89.8 6.7 0.00023 44.7 17.2 69 86-168 972-1040(1249)
166 2xyi_A Probable histone-bindin 89.8 12 0.00041 36.8 17.2 63 89-163 196-264 (430)
167 2vdu_B TRNA (guanine-N(7)-)-me 89.6 17 0.00058 35.9 21.4 151 32-222 116-274 (450)
168 2pbi_B Guanine nucleotide-bind 89.5 15 0.00051 35.1 21.1 93 87-196 210-304 (354)
169 3ei3_B DNA damage-binding prot 89.5 15 0.00052 35.1 18.3 145 88-276 87-236 (383)
170 2pm9_A Protein WEB1, protein t 89.5 11 0.00038 36.3 16.5 112 33-164 27-147 (416)
171 4e54_B DNA damage-binding prot 89.4 1.5 5.3E-05 43.6 10.2 98 86-197 131-230 (435)
172 3lrv_A PRE-mRNA-splicing facto 89.3 15 0.0005 34.7 20.1 192 31-278 48-246 (343)
173 3pe7_A Oligogalacturonate lyas 89.3 8.5 0.00029 36.9 15.4 216 29-284 45-281 (388)
174 4gga_A P55CDC, cell division c 89.2 17 0.00059 35.4 19.2 96 46-164 125-220 (420)
175 3c5m_A Oligogalacturonate lyas 89.1 4 0.00014 39.3 12.8 109 46-169 216-336 (396)
176 2ghs_A AGR_C_1268P; regucalcin 89.1 15 0.00052 34.6 23.1 113 31-168 61-174 (326)
177 1itv_A MMP9; adaptive molecula 88.9 6.4 0.00022 34.7 12.6 151 81-279 11-177 (195)
178 3bg1_A Protein SEC13 homolog; 88.6 9.7 0.00033 35.7 14.9 114 29-167 23-142 (316)
179 1erj_A Transcriptional repress 88.4 19 0.00065 34.8 21.0 106 86-222 134-241 (393)
180 3dr2_A Exported gluconolactona 88.0 17 0.00057 33.8 17.7 203 32-284 58-275 (305)
181 1kv9_A Type II quinohemoprotei 87.7 31 0.0011 36.5 25.3 125 27-168 64-195 (668)
182 3odt_A Protein DOA1; ubiquitin 87.7 16 0.00056 33.3 17.4 147 86-282 154-302 (313)
183 1kb0_A Quinohemoprotein alcoho 87.6 32 0.0011 36.5 21.6 125 82-226 73-208 (677)
184 1pby_B Quinohemoprotein amine 87.3 18 0.00062 33.4 17.1 121 24-167 38-168 (337)
185 3dm0_A Maltose-binding peripla 87.2 32 0.0011 36.2 21.6 192 29-279 440-635 (694)
186 2fp8_A Strictosidine synthase; 87.0 20 0.00068 33.6 19.3 231 46-308 40-300 (322)
187 1w6s_A Methanol dehydrogenase 86.6 33 0.0011 35.8 21.7 125 26-169 59-200 (599)
188 2aq5_A Coronin-1A; WD40 repeat 86.3 25 0.00084 33.9 20.7 156 86-278 93-256 (402)
189 1pex_A Collagenase-3, MMP-13; 86.3 17 0.00059 32.2 14.4 142 25-196 29-183 (207)
190 3lrv_A PRE-mRNA-splicing facto 86.2 22 0.00077 33.4 21.2 68 86-166 138-205 (343)
191 3dm0_A Maltose-binding peripla 86.2 23 0.00078 37.4 17.5 64 86-163 441-504 (694)
192 1itv_A MMP9; adaptive molecula 86.1 17 0.00058 31.9 15.6 141 25-196 12-165 (195)
193 1pex_A Collagenase-3, MMP-13; 86.1 18 0.00061 32.1 14.9 153 81-281 28-197 (207)
194 2gop_A Trilobed protease; beta 86.1 22 0.00076 33.2 21.3 58 102-169 152-214 (347)
195 3i2n_A WD repeat-containing pr 85.3 24 0.00082 32.9 15.8 67 88-164 32-101 (357)
196 3o4h_A Acylamino-acid-releasin 85.3 8.9 0.00031 39.5 13.5 98 48-166 134-231 (582)
197 3hxj_A Pyrrolo-quinoline quino 85.1 24 0.00082 32.7 16.5 101 30-168 107-211 (330)
198 2p4o_A Hypothetical protein; p 84.9 25 0.00085 32.7 23.7 116 20-163 32-148 (306)
199 3hrp_A Uncharacterized protein 84.9 31 0.0011 33.8 26.8 208 24-284 135-362 (409)
200 3o4h_A Acylamino-acid-releasin 84.7 18 0.0006 37.2 15.4 110 86-223 121-231 (582)
201 3no2_A Uncharacterized protein 84.0 26 0.00089 32.2 18.1 65 86-168 4-72 (276)
202 1yfq_A Cell cycle arrest prote 83.6 28 0.00095 32.2 15.7 69 86-169 22-96 (342)
203 3b7f_A Glycosyl hydrolase, BNR 83.3 35 0.0012 33.1 21.2 215 48-308 33-297 (394)
204 2xyi_A Probable histone-bindin 83.0 35 0.0012 33.3 16.3 27 131-162 186-213 (430)
205 3iuj_A Prolyl endopeptidase; h 82.9 51 0.0018 34.8 19.2 170 86-285 139-326 (693)
206 1yiq_A Quinohemoprotein alcoho 82.9 52 0.0018 34.9 26.5 126 29-168 69-200 (689)
207 3fvz_A Peptidyl-glycine alpha- 82.3 33 0.0011 32.2 25.1 162 86-276 154-322 (329)
208 3scy_A Hypothetical bacterial 82.1 34 0.0012 32.2 22.6 67 32-111 63-129 (361)
209 2pm7_B Protein transport prote 81.9 31 0.0011 31.6 16.9 27 31-62 67-93 (297)
210 3odt_A Protein DOA1; ubiquitin 81.6 31 0.0011 31.3 21.9 42 267-313 246-288 (313)
211 1jmx_B Amine dehydrogenase; ox 80.5 13 0.00044 34.7 11.5 69 86-167 10-79 (349)
212 3mmy_A MRNA export factor; mRN 80.3 37 0.0013 31.5 17.3 63 30-113 97-162 (368)
213 2hz6_A Endoplasmic reticulum t 78.9 4.2 0.00014 39.6 7.5 69 23-115 2-74 (369)
214 3iz6_a 40S ribosomal protein R 78.8 47 0.0016 31.7 23.7 176 103-313 181-367 (380)
215 1k32_A Tricorn protease; prote 78.6 88 0.003 34.8 21.0 192 31-283 214-416 (1045)
216 2hes_X YDR267CP; beta-propelle 78.5 43 0.0015 31.2 19.9 105 33-161 26-137 (330)
217 2ymu_A WD-40 repeat protein; u 78.2 61 0.0021 32.7 20.3 173 86-312 355-530 (577)
218 2ynn_A Coatomer subunit beta'; 77.7 43 0.0015 30.8 22.4 105 30-163 66-173 (304)
219 3gre_A Serine/threonine-protei 77.6 53 0.0018 31.8 18.3 68 136-223 180-249 (437)
220 1qks_A Cytochrome CD1 nitrite 77.5 69 0.0024 33.0 20.1 213 32-277 257-478 (567)
221 3k26_A Polycomb protein EED; W 75.6 51 0.0017 30.5 15.0 141 103-277 45-193 (366)
222 1pby_B Quinohemoprotein amine 75.2 50 0.0017 30.2 14.7 58 102-167 11-70 (337)
223 3k26_A Polycomb protein EED; W 73.8 57 0.0019 30.2 20.8 68 87-168 85-153 (366)
224 1hxn_A Hemopexin, HPX; heme, b 73.8 15 0.0005 33.0 9.0 108 29-162 27-144 (219)
225 1yiq_A Quinohemoprotein alcoho 73.5 51 0.0017 35.0 14.8 121 136-282 69-200 (689)
226 3ju4_A Endo-N-acetylneuraminid 73.4 73 0.0025 31.3 19.5 209 54-274 268-512 (670)
227 2ad6_A Methanol dehydrogenase 72.8 91 0.0031 32.1 26.7 75 210-307 444-523 (571)
228 3f3f_A Nucleoporin SEH1; struc 72.4 57 0.002 29.7 21.5 111 29-164 21-145 (351)
229 1su3_A Interstitial collagenas 72.3 52 0.0018 32.9 13.6 154 81-282 267-438 (450)
230 3ju4_A Endo-N-acetylneuraminid 72.3 78 0.0027 31.1 21.1 196 104-311 260-482 (670)
231 1k32_A Tricorn protease; prote 71.9 45 0.0015 37.2 14.5 161 29-226 306-468 (1045)
232 3c7x_A Matrix metalloproteinas 71.9 50 0.0017 28.8 12.3 108 28-164 59-177 (196)
233 1gen_A Gelatinase A; hydrolase 71.6 55 0.0019 29.1 15.0 66 80-160 34-103 (218)
234 3bg1_A Protein SEC13 homolog; 71.4 50 0.0017 30.5 12.9 70 86-168 24-96 (316)
235 1su3_A Interstitial collagenas 70.9 53 0.0018 32.9 13.2 157 24-223 267-436 (450)
236 2ghs_A AGR_C_1268P; regucalcin 70.5 70 0.0024 29.9 18.6 110 28-161 98-209 (326)
237 4a5s_A Dipeptidyl peptidase 4 70.3 92 0.0032 33.0 16.1 18 267-284 344-361 (740)
238 2p4o_A Hypothetical protein; p 69.5 70 0.0024 29.5 18.5 117 24-162 76-198 (306)
239 1gen_A Gelatinase A; hydrolase 69.3 62 0.0021 28.8 13.7 113 24-164 35-155 (218)
240 2ymu_A WD-40 repeat protein; u 69.1 99 0.0034 31.0 21.6 173 86-312 314-489 (577)
241 3ba0_A Macrophage metalloelast 68.4 63 0.0022 31.3 12.9 154 81-281 185-355 (365)
242 4d9s_A UVB-resistance protein 68.0 93 0.0032 30.3 25.8 18 128-145 182-199 (406)
243 2xe4_A Oligopeptidase B; hydro 67.9 1.3E+02 0.0045 32.0 17.9 201 30-274 185-398 (751)
244 1flg_A Protein (quinoprotein e 67.2 1.2E+02 0.0041 31.3 20.9 120 29-167 67-200 (582)
245 3ba0_A Macrophage metalloelast 66.4 77 0.0026 30.6 13.1 154 25-224 186-355 (365)
246 3b7f_A Glycosyl hydrolase, BNR 65.9 97 0.0033 29.8 16.4 150 104-284 33-216 (394)
247 3hxj_A Pyrrolo-quinoline quino 64.2 87 0.003 28.6 13.7 103 26-166 143-249 (330)
248 3gre_A Serine/threonine-protei 63.6 1.1E+02 0.0037 29.5 18.5 70 86-167 181-250 (437)
249 4d9s_A UVB-resistance protein 62.3 1.2E+02 0.0041 29.5 23.7 19 21-39 25-43 (406)
250 1z68_A Fibroblast activation p 61.7 42 0.0014 35.4 11.1 18 267-284 337-354 (719)
251 1w6s_A Methanol dehydrogenase 61.1 1.6E+02 0.0054 30.6 16.5 73 33-118 124-200 (599)
252 1kv9_A Type II quinohemoprotei 60.5 1E+02 0.0034 32.5 13.7 119 137-282 66-195 (668)
253 1nr0_A Actin interacting prote 60.5 1.6E+02 0.0053 30.3 22.5 73 86-168 201-276 (611)
254 3qhy_B Beta-lactamase inhibito 60.2 74 0.0025 29.4 11.3 56 79-146 151-206 (282)
255 3frx_A Guanine nucleotide-bind 59.2 1.1E+02 0.0038 28.1 17.5 66 86-165 76-141 (319)
256 3oyo_A Hemopexin fold protein 59.1 99 0.0034 27.6 11.8 97 85-196 69-189 (225)
257 3c7x_A Matrix metalloproteinas 58.9 91 0.0031 27.1 14.0 112 25-164 11-129 (196)
258 3mvd_K Regulator of chromosome 57.8 1.4E+02 0.0049 29.0 20.2 18 21-38 136-153 (423)
259 3kci_A Probable E3 ubiquitin-p 57.6 1.4E+02 0.0047 28.8 21.9 18 128-145 168-185 (389)
260 3kci_A Probable E3 ubiquitin-p 56.8 1.4E+02 0.0049 28.7 20.2 19 21-39 116-134 (389)
261 3oyo_A Hemopexin fold protein 56.2 50 0.0017 29.5 8.9 63 86-162 127-198 (225)
262 1xfd_A DIP, dipeptidyl aminope 55.7 1.4E+02 0.0048 31.1 14.0 109 47-169 38-150 (723)
263 3of7_A Regulator of chromosome 55.2 1.7E+02 0.0058 29.1 17.6 19 21-39 76-94 (473)
264 1a12_A RCC1, regulator of chro 54.2 1.6E+02 0.0055 28.5 18.6 18 21-38 120-137 (413)
265 4h5i_A Guanine nucleotide-exch 53.9 1.5E+02 0.005 28.0 15.5 78 83-166 227-304 (365)
266 3iz6_a 40S ribosomal protein R 53.5 1.5E+02 0.0052 28.0 21.1 67 86-167 217-285 (380)
267 2xe4_A Oligopeptidase B; hydro 51.0 2.5E+02 0.0085 29.8 16.0 164 86-281 185-360 (751)
268 3dw8_B Serine/threonine-protei 50.7 1.7E+02 0.0059 27.9 15.7 229 23-312 32-364 (447)
269 2p9w_A MAL S 1 allergenic prot 49.9 1.8E+02 0.006 27.7 14.0 147 132-311 142-305 (334)
270 1ck7_A Protein (gelatinase A); 49.8 1.3E+02 0.0044 31.5 11.9 112 26-164 449-568 (631)
271 1n7d_A LDL receptor, low-densi 48.3 2.7E+02 0.0092 29.4 17.0 205 46-308 386-601 (699)
272 3lp9_A LS-24; SEED albumin, pl 48.2 25 0.00084 31.7 5.5 62 86-163 129-202 (227)
273 1hxn_A Hemopexin, HPX; heme, b 47.8 90 0.0031 27.7 9.1 61 85-162 27-90 (219)
274 1npe_A Nidogen, entactin; glyc 47.4 1.5E+02 0.0052 26.3 26.3 198 23-280 39-242 (267)
275 3qhy_B Beta-lactamase inhibito 47.3 1.7E+02 0.0058 26.8 18.7 173 21-254 33-207 (282)
276 2p9w_A MAL S 1 allergenic prot 47.1 2E+02 0.0067 27.4 15.9 66 86-164 147-217 (334)
277 4ggc_A P55CDC, cell division c 46.5 1.6E+02 0.0055 26.3 19.7 59 46-117 45-104 (318)
278 1a12_A RCC1, regulator of chro 45.6 2.2E+02 0.0074 27.6 23.4 19 21-39 68-86 (413)
279 3frx_A Guanine nucleotide-bind 45.2 1.8E+02 0.0062 26.6 22.7 108 29-166 75-189 (319)
280 2xzm_R RACK1; ribosome, transl 44.8 1.9E+02 0.0065 26.7 17.5 62 31-112 88-150 (343)
281 3hrp_A Uncharacterized protein 44.5 2.3E+02 0.0078 27.4 18.5 151 86-277 141-299 (409)
282 1nr0_A Actin interacting prote 40.0 3.2E+02 0.011 27.8 21.1 66 88-167 161-226 (611)
283 1z68_A Fibroblast activation p 39.8 3.4E+02 0.012 28.1 16.2 66 103-169 225-298 (719)
284 1flg_A Protein (quinoprotein e 39.7 1.6E+02 0.0054 30.3 10.9 77 45-143 465-545 (582)
285 3mvd_K Regulator of chromosome 38.4 2.8E+02 0.0096 26.8 14.5 18 21-38 188-205 (423)
286 1ck7_A Protein (gelatinase A); 37.8 2.2E+02 0.0074 29.8 11.4 65 81-160 448-516 (631)
287 2mad_H Methylamine dehydrogena 36.0 2.9E+02 0.01 26.3 15.5 73 86-168 278-356 (373)
288 3f3f_A Nucleoporin SEH1; struc 35.2 2.4E+02 0.0084 25.1 17.8 65 86-163 22-91 (351)
289 1npe_A Nidogen, entactin; glyc 34.6 2.4E+02 0.0082 24.9 23.5 180 80-308 39-225 (267)
290 1n7d_A LDL receptor, low-densi 33.6 4.4E+02 0.015 27.6 16.4 151 85-278 463-616 (699)
291 3k6s_A Integrin alpha-X; cell 33.3 3.8E+02 0.013 30.1 13.2 159 21-186 335-509 (1095)
292 1ijq_A LDL receptor, low-densi 30.7 3.2E+02 0.011 25.1 26.7 205 46-308 10-225 (316)
293 3of7_A Regulator of chromosome 29.1 1.9E+02 0.0063 28.8 9.1 18 21-38 157-174 (473)
294 3v65_B Low-density lipoprotein 28.9 3.8E+02 0.013 25.5 25.9 203 46-308 96-305 (386)
295 4hvt_A Ritya.17583.B, post-pro 28.6 4E+02 0.014 28.2 11.9 102 46-166 269-385 (711)
296 3tc9_A Hypothetical hydrolase; 28.1 4.2E+02 0.014 25.7 12.8 110 30-168 149-263 (430)
297 4hvt_A Ritya.17583.B, post-pro 27.9 3.9E+02 0.013 28.2 11.7 151 101-285 268-438 (711)
298 1fwx_A Nitrous oxide reductase 27.5 4.8E+02 0.016 27.0 11.8 253 16-294 130-449 (595)
299 2cn3_A Xyloglucanase, beta-1,4 26.3 5.9E+02 0.02 26.8 30.1 86 218-310 230-322 (737)
300 2mad_H Methylamine dehydrogena 24.0 4.6E+02 0.016 24.8 24.2 81 29-116 76-161 (373)
301 1lts_C Heat-labIle enterotoxin 22.9 47 0.0016 20.8 1.9 13 444-456 15-27 (41)
302 4h5i_A Guanine nucleotide-exch 22.5 4.7E+02 0.016 24.3 23.4 173 102-312 157-334 (365)
303 2xzm_R RACK1; ribosome, transl 21.5 4.6E+02 0.016 23.9 20.7 64 86-163 87-150 (343)
304 3tc9_A Hypothetical hydrolase; 21.1 5.7E+02 0.019 24.7 13.1 147 86-275 149-300 (430)
305 2qe8_A Uncharacterized protein 20.8 4.9E+02 0.017 23.9 13.1 135 79-225 20-160 (343)
No 1
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3e-46 Score=369.14 Aligned_cols=288 Identities=18% Similarity=0.246 Sum_probs=244.0
Q ss_pred CCCCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEE
Q 010770 13 GGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF 92 (501)
Q Consensus 13 ~g~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~ 92 (501)
.++.|.+|.+|+++.++ ++||+|||. ....++++++||+.+++|..++ ++|.+|.+|++++++++||++
T Consensus 8 ~~~~~~~~~~~~~~~~~-~~i~v~GG~-~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~ 76 (308)
T 1zgk_A 8 HHSSGLVPRGSHAPKVG-RLIYTAGGY-FRQSLSYLEAYNPSNGTWLRLA---------DLQVPRSGLAGCVVGGLLYAV 76 (308)
T ss_dssp -------------CCCC-CCEEEECCB-SSSBCCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEE
T ss_pred cccCCeeeCCccccCCC-CEEEEEeCc-CCCCcceEEEEcCCCCeEeECC---------CCCcccccceEEEECCEEEEE
Confidence 35678899999999998 799999999 5677899999999999999985 478899999999999999999
Q ss_pred ccc----cCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEc
Q 010770 93 GGR----FGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (501)
Q Consensus 93 GG~----~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 168 (501)
||. .+...++++++||+.+++|+++++ +|.+|..|++++++ ++||++||.+.....+++++||+.+++|+.+
T Consensus 77 GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~ 152 (308)
T 1zgk_A 77 GGRNNSPDGNTDSSALDCYNPMTNQWSPCAP---MSVPRNRIGVGVID-GHIYAVGGSHGCIHHNSVERYEPERDEWHLV 152 (308)
T ss_dssp CCEEEETTEEEECCCEEEEETTTTEEEECCC---CSSCCBTCEEEEET-TEEEEECCEETTEECCCEEEEETTTTEEEEC
T ss_pred CCCcCCCCCCeecceEEEECCCCCeEeECCC---CCcCccccEEEEEC-CEEEEEcCCCCCcccccEEEECCCCCeEeEC
Confidence 998 555678999999999999999984 99999999999995 4999999998877889999999999999999
Q ss_pred ccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEE
Q 010770 169 PVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLL 248 (501)
Q Consensus 169 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~ 248 (501)
+ ++|.+|.+|++++++++|||+||..... .++.+++||+.+++|+.++ .+|.+|..|+++..+++||
T Consensus 153 ~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iy 219 (308)
T 1zgk_A 153 A---PMLTRRIGVGVAVLNRLLYAVGGFDGTN-------RLNSAECYYPERNEWRMIT---AMNTIRSGAGVCVLHNCIY 219 (308)
T ss_dssp C---CCSSCCBSCEEEEETTEEEEECCBCSSC-------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEE
T ss_pred C---CCCccccceEEEEECCEEEEEeCCCCCC-------cCceEEEEeCCCCeEeeCC---CCCCccccceEEEECCEEE
Confidence 8 8999999999999999999999987654 2577888999999999997 7899999999999999999
Q ss_pred EEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCCCccCcEEEecCCCCc
Q 010770 249 LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDP 328 (501)
Q Consensus 249 v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~d~w~~~~~~d~ 328 (501)
++||.+... ..+++++||+.+++|+.++. .|.+|..|++++++++|||+||.++...++++|.|+ +
T Consensus 220 v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd----~ 285 (308)
T 1zgk_A 220 AAGGYDGQD-------QLNSVERYDVETETWTFVAP---MKHRRSALGITVHQGRIYVLGGYDGHTFLDSVECYD----P 285 (308)
T ss_dssp EECCBCSSS-------BCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEE----T
T ss_pred EEeCCCCCC-------ccceEEEEeCCCCcEEECCC---CCCCccceEEEEECCEEEEEcCcCCCcccceEEEEc----C
Confidence 999987532 57899999999999999986 467999999999999999999998877788888655 5
Q ss_pred cccceecCCCCCCC
Q 010770 329 IAKRYTESPPKVLP 342 (501)
Q Consensus 329 ~~~~w~~~~~~~~~ 342 (501)
.+++|+..+..+.+
T Consensus 286 ~~~~W~~~~~~p~~ 299 (308)
T 1zgk_A 286 DTDTWSEVTRMTSG 299 (308)
T ss_dssp TTTEEEEEEECSSC
T ss_pred CCCEEeecCCCCCC
Confidence 58889877544433
No 2
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=6.7e-44 Score=351.00 Aligned_cols=270 Identities=21% Similarity=0.343 Sum_probs=238.7
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
++ +.||++||.+. ..++++++||+.+++|..+. ++|.+|..|++++++++||++||..+...++++++|
T Consensus 14 ~~-~~i~v~GG~~~-~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~ 82 (302)
T 2xn4_A 14 LP-KLMVVVGGQAP-KAIRSVECYDFKEERWHQVA---------ELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSY 82 (302)
T ss_dssp -C-EEEEEECCBSS-SBCCCEEEEETTTTEEEEEC---------CCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEE
T ss_pred CC-CEEEEECCCCC-CCCCcEEEEcCcCCcEeEcc---------cCCcccccceEEEECCEEEEEeCcCCCccccceEEE
Confidence 44 79999999865 46789999999999999985 468899999999999999999999887788999999
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeC
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVE 187 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~ 187 (501)
|+.+++|+++++ +|.+|..|+++++++ +||++||.+.....+++++||+.+++|+.++ ++|.+|.+|+++.++
T Consensus 83 d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~ 155 (302)
T 2xn4_A 83 DPVKDQWTSVAN---MRDRRSTLGAAVLNG-LLYAVGGFDGSTGLSSVEAYNIKSNEWFHVA---PMNTRRSSVGVGVVG 155 (302)
T ss_dssp ETTTTEEEEECC---CSSCCBSCEEEEETT-EEEEEEEECSSCEEEEEEEEETTTTEEEEEC---CCSSCCBSCEEEEET
T ss_pred CCCCCceeeCCC---CCccccceEEEEECC-EEEEEcCCCCCccCceEEEEeCCCCeEeecC---CCCCcccCceEEEEC
Confidence 999999999984 999999999999955 9999999988778899999999999999998 899999999999999
Q ss_pred CEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccC
Q 010770 188 KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYN 267 (501)
Q Consensus 188 ~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 267 (501)
++||++||...... ..++.+++||+.+++|+.++ ++|.+|..|++++.+++||++||.+.. ...+
T Consensus 156 ~~iyv~GG~~~~~~-----~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~-------~~~~ 220 (302)
T 2xn4_A 156 GLLYAVGGYDVASR-----QCLSTVECYNATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGP-------LVRK 220 (302)
T ss_dssp TEEEEECCEETTTT-----EECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSS-------SBCC
T ss_pred CEEEEEeCCCCCCC-----ccccEEEEEeCCCCcEEECC---CCccccccccEEEECCEEEEECCCCCC-------cccc
Confidence 99999999865431 12467888899999999997 789999999999999999999998753 3578
Q ss_pred eEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCCCccCcEEEecCCCCccccceecCC
Q 010770 268 DTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESP 337 (501)
Q Consensus 268 ~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~d~w~~~~~~d~~~~~w~~~~ 337 (501)
++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|.| |+.+++|+..+
T Consensus 221 ~~~~yd~~~~~W~~~~~---~~~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~y----d~~~~~W~~~~ 283 (302)
T 2xn4_A 221 SVEVYDPTTNAWRQVAD---MNMCRRNAGVCAVNGLLYVVGGDDGSCNLASVEYY----NPTTDKWTVVS 283 (302)
T ss_dssp CEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBCCCEEEE----ETTTTEEEECS
T ss_pred eEEEEeCCCCCEeeCCC---CCCccccCeEEEECCEEEEECCcCCCcccccEEEE----cCCCCeEEECC
Confidence 99999999999999986 46689999999999999999999887778888765 45588999774
No 3
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=6.4e-44 Score=351.82 Aligned_cols=272 Identities=19% Similarity=0.226 Sum_probs=238.3
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
+.||+|||... .+++++||+.+++|..++ ++|.+|.+|++++++++||++||.. ...++++++||+.
T Consensus 12 ~~l~~~GG~~~---~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~lyv~GG~~-~~~~~~~~~~d~~ 78 (306)
T 3ii7_A 12 DYRIALFGGSQ---PQSCRYFNPKDYSWTDIR---------CPFEKRRDAACVFWDNVVYILGGSQ-LFPIKRMDCYNVV 78 (306)
T ss_dssp CEEEEEECCSS---TTSEEEEETTTTEEEECC---------CCSCCCBSCEEEEETTEEEEECCBS-SSBCCEEEEEETT
T ss_pred ceEEEEeCCCC---CceEEEecCCCCCEecCC---------CCCcccceeEEEEECCEEEEEeCCC-CCCcceEEEEeCC
Confidence 68999999766 789999999999999986 4688999999999999999999998 6778999999999
Q ss_pred CCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCC-CCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCE
Q 010770 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (501)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 189 (501)
+++|..+++ +|.+|..|+++++++ +||++||.+ .....+++++||+.+++|+.++ ++|.+|.+|+++.++++
T Consensus 79 ~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~ 151 (306)
T 3ii7_A 79 KDSWYSKLG---PPTPRDSLAACAAEG-KIYTSGGSEVGNSALYLFECYDTRTESWHTKP---SMLTQRCSHGMVEANGL 151 (306)
T ss_dssp TTEEEEEEC---CSSCCBSCEEEEETT-EEEEECCBBTTBSCCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTE
T ss_pred CCeEEECCC---CCccccceeEEEECC-EEEEECCCCCCCcEeeeEEEEeCCCCceEeCC---CCcCCcceeEEEEECCE
Confidence 999999985 999999999999954 999999987 5567899999999999999997 89999999999999999
Q ss_pred EEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeE
Q 010770 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (501)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (501)
|||+||........ ..++.+++||+.+++|+.++ ++|.+|..|+++..+++||++||.+.. ...+++
T Consensus 152 iyv~GG~~~~~~~~---~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~-------~~~~~~ 218 (306)
T 3ii7_A 152 IYVCGGSLGNNVSG---RVLNSCEVYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGL-------GGLDNV 218 (306)
T ss_dssp EEEECCEESCTTTC---EECCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETT-------EEBCCE
T ss_pred EEEECCCCCCCCcc---cccceEEEeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCC-------CCCceE
Confidence 99999986543210 02577888899999999998 789999999999999999999998653 357899
Q ss_pred EEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCCCccCcEEEecCCCCccccceecCCCCCCC
Q 010770 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESPPKVLP 342 (501)
Q Consensus 270 ~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~d~w~~~~~~d~~~~~w~~~~~~~~~ 342 (501)
++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|.|+ +.+++|+..+..+.+
T Consensus 219 ~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~yd----~~~~~W~~~~~~~~~ 284 (306)
T 3ii7_A 219 EYYDIKLNEWKMVSP---MPWKGVTVKCAAVGSIVYVLAGFQGVGRLGHILEYN----TETDKWVANSKVRAF 284 (306)
T ss_dssp EEEETTTTEEEECCC---CSCCBSCCEEEEETTEEEEEECBCSSSBCCEEEEEE----TTTTEEEEEEEEECC
T ss_pred EEeeCCCCcEEECCC---CCCCccceeEEEECCEEEEEeCcCCCeeeeeEEEEc----CCCCeEEeCCCcccc
Confidence 999999999999986 466999999999999999999998877888888654 558889877544433
No 4
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=7.9e-44 Score=350.19 Aligned_cols=267 Identities=20% Similarity=0.337 Sum_probs=239.1
Q ss_pred cEEEEEcc-cCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEEC
Q 010770 31 SKVVVFGG-LVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 31 ~~iyv~GG-~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
+.||+||| ......++++++||+.+++|..++ ++|.+|.+|+++.++++||++||..+...++++++||+
T Consensus 15 ~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~ 85 (301)
T 2vpj_A 15 EVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLP---------SITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDY 85 (301)
T ss_dssp EEEEEECCEETTTEECCCEEEEETTTTEEEECC---------CCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEET
T ss_pred CEEEEEeCccCCCcceeEEEEEcCCCCeEEeCC---------CCChhhccccEEEECCEEEEEcCCCCCccCceEEEEEC
Confidence 79999999 666778899999999999999986 46889999999999999999999988778899999999
Q ss_pred CCCe---EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe
Q 010770 110 DIWQ---WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (501)
Q Consensus 110 ~t~~---W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (501)
.+++ |+.+++ +|.+|..|++++++ ++||++||.......+++++||+.+++|+.++ ++|.+|.+|+++++
T Consensus 86 ~~~~~~~W~~~~~---~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~ 158 (301)
T 2vpj_A 86 TADEDGVWYSVAP---MNVRRGLAGATTLG-DMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG---DMQTAREGAGLVVA 158 (301)
T ss_dssp TCCTTCCCEEECC---CSSCCBSCEEEEET-TEEEEECCBCSSCBCCEEEEEETTTTEEEEEE---ECSSCCBSCEEEEE
T ss_pred CCCCCCeeEECCC---CCCCccceeEEEEC-CEEEEEcccCCCcccceEEEEcCCCCeEEECC---CCCCCcccceEEEE
Confidence 9999 999974 99999999999995 59999999988777899999999999999998 88999999999999
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCccccccc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYY 266 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~ 266 (501)
+++||++||..... .++.+++||+.+++|+.++ ++|.+|..|+++..+++||++||.+... ..
T Consensus 159 ~~~iyv~GG~~~~~-------~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~ 221 (301)
T 2vpj_A 159 SGVIYCLGGYDGLN-------ILNSVEKYDPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA-------HL 221 (301)
T ss_dssp TTEEEEECCBCSSC-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BC
T ss_pred CCEEEEECCCCCCc-------ccceEEEEeCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc-------cc
Confidence 99999999986543 3577888999999999997 7899999999999999999999987543 47
Q ss_pred CeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCCCccCcEEEecCCCCccccceecCC
Q 010770 267 NDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKSTFGDIWWLVPEEDPIAKRYTESP 337 (501)
Q Consensus 267 ~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~d~w~~~~~~d~~~~~w~~~~ 337 (501)
+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++...++++|.|+ +.+++|+..+
T Consensus 222 ~~v~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~v~~yd----~~~~~W~~~~ 285 (301)
T 2vpj_A 222 SSVEAYNIRTDSWTTVTS---MTTPRCYVGATVLRGRLYAIAGYDGNSLLSSIECYD----PIIDSWEVVT 285 (301)
T ss_dssp CCEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEECCBCSSSBEEEEEEEE----TTTTEEEEEE
T ss_pred ceEEEEeCCCCcEEECCC---CCCcccceeEEEECCEEEEEcCcCCCcccccEEEEc----CCCCeEEEcC
Confidence 899999999999999986 466999999999999999999998877778887655 5578898764
No 5
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=100.00 E-value=1.1e-42 Score=342.30 Aligned_cols=261 Identities=18% Similarity=0.298 Sum_probs=231.4
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeE
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (501)
.+|.+++ .+|.+|.+|++++++ ++|||+||..+...++++++||+.+++|+.++ ++|.+|..|+
T Consensus 40 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 103 (302)
T 2xn4_A 40 ERWHQVA------ELPSRRCRAGMVYMA-GLVFAVGGFNGSLRVRTVDSYDPVKDQWTSVA---------NMRDRRSTLG 103 (302)
T ss_dssp TEEEEEC------CCSSCCBSCEEEEET-TEEEEESCBCSSSBCCCEEEEETTTTEEEEEC---------CCSSCCBSCE
T ss_pred CcEeEcc------cCCcccccceEEEEC-CEEEEEeCcCCCccccceEEECCCCCceeeCC---------CCCccccceE
Confidence 3688885 489999999999997 79999999988888899999999999999986 4788999999
Q ss_pred EEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCc--ccccEEEEE
Q 010770 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK--WLSDVYVLD 159 (501)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~--~~~~~~~yd 159 (501)
+++++++||++||..+...++++++||+.+++|+.+++ +|.+|..|+++++++ +||++||.+... ..+++++||
T Consensus 104 ~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd 179 (302)
T 2xn4_A 104 AAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAP---MNTRRSSVGVGVVGG-LLYAVGGYDVASRQCLSTVECYN 179 (302)
T ss_dssp EEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETT-EEEEECCEETTTTEECCCEEEEE
T ss_pred EEEECCEEEEEcCCCCCccCceEEEEeCCCCeEeecCC---CCCcccCceEEEECC-EEEEEeCCCCCCCccccEEEEEe
Confidence 99999999999999887778999999999999999974 899999999999855 999999986653 578999999
Q ss_pred CCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeE
Q 010770 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (501)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s 239 (501)
+.+++|+.++ ++|.+|.+|++++++++|||+||..... .++.+++||+.+++|+.+. .+|.+|..|+
T Consensus 180 ~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~~~~r~~~~ 246 (302)
T 2xn4_A 180 ATTNEWTYIA---EMSTRRSGAGVGVLNNLLYAVGGHDGPL-------VRKSVEVYDPTTNAWRQVA---DMNMCRRNAG 246 (302)
T ss_dssp TTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBSSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSCE
T ss_pred CCCCcEEECC---CCccccccccEEEECCEEEEECCCCCCc-------ccceEEEEeCCCCCEeeCC---CCCCccccCe
Confidence 9999999997 8999999999999999999999986543 3467888999999999998 7889999999
Q ss_pred EEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEE
Q 010770 240 ITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLY 304 (501)
Q Consensus 240 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~i 304 (501)
++..+++||++||.+.. ...+++++||+.+++|+.++.. .|.+|..|++++++++|
T Consensus 247 ~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~~--~~~~r~~~~~~~~~~~i 302 (302)
T 2xn4_A 247 VCAVNGLLYVVGGDDGS-------CNLASVEYYNPTTDKWTVVSSC--MSTGRSYAGVTVIDKRL 302 (302)
T ss_dssp EEEETTEEEEECCBCSS-------SBCCCEEEEETTTTEEEECSSC--CSSCCBSCEEEEEEC--
T ss_pred EEEECCEEEEECCcCCC-------cccccEEEEcCCCCeEEECCcc--cCcccccceEEEecccC
Confidence 99999999999998653 2578999999999999999732 47799999999998765
No 6
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=100.00 E-value=3.3e-42 Score=340.16 Aligned_cols=256 Identities=19% Similarity=0.290 Sum_probs=230.2
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEccc----CCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCc
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGL----VDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPR 77 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~----~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R 77 (501)
.+|++++ .+|.+|.+|++++++ ++|||+||. .+...++++++||+.+++|+.++ ++|.+|
T Consensus 49 ~~W~~~~------~~p~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~~r 112 (308)
T 1zgk_A 49 GTWLRLA------DLQVPRSGLAGCVVG-GLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCA---------PMSVPR 112 (308)
T ss_dssp TEEEECC------CCSSCCBSCEEEEET-TEEEEECCEEEETTEEEECCCEEEEETTTTEEEECC---------CCSSCC
T ss_pred CeEeECC------CCCcccccceEEEEC-CEEEEECCCcCCCCCCeecceEEEECCCCCeEeECC---------CCCcCc
Confidence 4799885 489999999999997 799999998 55667899999999999999986 478899
Q ss_pred ceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEE
Q 010770 78 AFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (501)
Q Consensus 78 ~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 157 (501)
..|++++++++||++||..+...++++++||+.+++|+.+++ +|.+|..|++++++ ++||++||.+.....+++++
T Consensus 113 ~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~ 188 (308)
T 1zgk_A 113 NRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAP---MLTRRIGVGVAVLN-RLLYAVGGFDGTNRLNSAEC 188 (308)
T ss_dssp BTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCC---CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEE
T ss_pred cccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCC---CCccccceEEEEEC-CEEEEEeCCCCCCcCceEEE
Confidence 999999999999999999887788999999999999999984 89999999999995 59999999988777899999
Q ss_pred EECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCcee
Q 010770 158 LDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG 237 (501)
Q Consensus 158 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~ 237 (501)
||+.+++|+.++ ++|.+|.+|++++++++|||+||..... .++.+++||+.+++|+.+. ++|.+|..
T Consensus 189 yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~ 255 (308)
T 1zgk_A 189 YYPERNEWRMIT---AMNTIRSGAGVCVLHNCIYAAGGYDGQD-------QLNSVERYDVETETWTFVA---PMKHRRSA 255 (308)
T ss_dssp EETTTTEEEECC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEECC---CCSSCCBS
T ss_pred EeCCCCeEeeCC---CCCCccccceEEEECCEEEEEeCCCCCC-------ccceEEEEeCCCCcEEECC---CCCCCccc
Confidence 999999999997 8999999999999999999999987543 2577888899999999998 78999999
Q ss_pred eEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE
Q 010770 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL 300 (501)
Q Consensus 238 ~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~ 300 (501)
|++++.+++||++||.+.. ...+++++||+.+++|+.++.+ |.+|..|+++++
T Consensus 256 ~~~~~~~~~i~v~GG~~~~-------~~~~~v~~yd~~~~~W~~~~~~---p~~r~~~~~~~l 308 (308)
T 1zgk_A 256 LGITVHQGRIYVLGGYDGH-------TFLDSVECYDPDTDTWSEVTRM---TSGRSGVGVAVT 308 (308)
T ss_dssp CEEEEETTEEEEECCBCSS-------CBCCEEEEEETTTTEEEEEEEC---SSCCBSCEEEEC
T ss_pred eEEEEECCEEEEEcCcCCC-------cccceEEEEcCCCCEEeecCCC---CCCcccceeEeC
Confidence 9999999999999998753 3678999999999999999774 669999998864
No 7
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=100.00 E-value=8.4e-42 Score=336.65 Aligned_cols=257 Identities=18% Similarity=0.273 Sum_probs=229.8
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeE
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (501)
.+|+++++ +|.+|.+|++++++ ++|||+||.. ...++++++||+.+++|..++ ++|.+|..|+
T Consensus 34 ~~W~~~~~------~p~~r~~~~~~~~~-~~lyv~GG~~-~~~~~~~~~~d~~~~~W~~~~---------~~p~~r~~~~ 96 (306)
T 3ii7_A 34 YSWTDIRC------PFEKRRDAACVFWD-NVVYILGGSQ-LFPIKRMDCYNVVKDSWYSKL---------GPPTPRDSLA 96 (306)
T ss_dssp TEEEECCC------CSCCCBSCEEEEET-TEEEEECCBS-SSBCCEEEEEETTTTEEEEEE---------CCSSCCBSCE
T ss_pred CCEecCCC------CCcccceeEEEEEC-CEEEEEeCCC-CCCcceEEEEeCCCCeEEECC---------CCCcccccee
Confidence 46998864 89999999999998 7999999998 677899999999999999986 4789999999
Q ss_pred EEEeCCEEEEEcccc-CCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcc----cccEE
Q 010770 82 AVAIDCHMFIFGGRF-GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKW----LSDVY 156 (501)
Q Consensus 82 ~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~----~~~~~ 156 (501)
+++++++|||+||.+ +...++++++||+.+++|+.+++ +|.+|..|+++++++ +||++||...... .++++
T Consensus 97 ~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~~ 172 (306)
T 3ii7_A 97 ACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPS---MLTQRCSHGMVEANG-LIYVCGGSLGNNVSGRVLNSCE 172 (306)
T ss_dssp EEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECC---CSSCCBSCEEEEETT-EEEEECCEESCTTTCEECCCEE
T ss_pred EEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCC---CcCCcceeEEEEECC-EEEEECCCCCCCCcccccceEE
Confidence 999999999999998 56678999999999999999974 999999999999855 9999999876654 89999
Q ss_pred EEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCce
Q 010770 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC 236 (501)
Q Consensus 157 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~ 236 (501)
+||+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.+++||+.+++|+.+. .+|.+|.
T Consensus 173 ~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p~~r~ 239 (306)
T 3ii7_A 173 VYDPATETWTELC---PMIEARKNHGLVFVKDKIFAVGGQNGLG-------GLDNVEYYDIKLNEWKMVS---PMPWKGV 239 (306)
T ss_dssp EEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCEETTE-------EBCCEEEEETTTTEEEECC---CCSCCBS
T ss_pred EeCCCCCeEEECC---CccchhhcceEEEECCEEEEEeCCCCCC-------CCceEEEeeCCCCcEEECC---CCCCCcc
Confidence 9999999999998 8999999999999999999999986543 3577889999999999997 7899999
Q ss_pred eeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECC
Q 010770 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGS 302 (501)
Q Consensus 237 ~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~ 302 (501)
.|+++..+++||++||.+..+ ..+++++||+.+++|+.++.+ |.+|..|+++++.+
T Consensus 240 ~~~~~~~~~~i~v~GG~~~~~-------~~~~~~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~~ 295 (306)
T 3ii7_A 240 TVKCAAVGSIVYVLAGFQGVG-------RLGHILEYNTETDKWVANSKV---RAFPVTSCLICVVD 295 (306)
T ss_dssp CCEEEEETTEEEEEECBCSSS-------BCCEEEEEETTTTEEEEEEEE---ECCSCTTCEEEEEE
T ss_pred ceeEEEECCEEEEEeCcCCCe-------eeeeEEEEcCCCCeEEeCCCc---ccccceeEEEEECC
Confidence 999999999999999987543 678999999999999999875 56899999887643
No 8
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=100.00 E-value=1.3e-41 Score=334.46 Aligned_cols=257 Identities=21% Similarity=0.325 Sum_probs=232.0
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCc---EEeceecCCCCCCCCCCCCcc
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL---WFQPECTGNGSNGQVGPGPRA 78 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l~~~~~~~~~~~~p~~R~ 78 (501)
.+|+++++ +|.+|.+|+++.++ ++||++||..+....+++++||+.+++ |+.+. ++|.+|.
T Consensus 41 ~~W~~~~~------~p~~r~~~~~~~~~-~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~---------~~p~~r~ 104 (301)
T 2vpj_A 41 QEWSFLPS------ITRKRRYVASVSLH-DRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVA---------PMNVRRG 104 (301)
T ss_dssp TEEEECCC------CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEEC---------CCSSCCB
T ss_pred CeEEeCCC------CChhhccccEEEEC-CEEEEEcCCCCCccCceEEEEECCCCCCCeeEECC---------CCCCCcc
Confidence 36888863 88899999999998 799999999887888999999999999 99985 4788999
Q ss_pred eeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEE
Q 010770 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (501)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 158 (501)
.|++++++++||++||..+...++++++||+.+++|+.+++ +|.+|..|++++++ ++||++||.+.....+++++|
T Consensus 105 ~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~ 180 (301)
T 2vpj_A 105 LAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGD---MQTAREGAGLVVAS-GVIYCLGGYDGLNILNSVEKY 180 (301)
T ss_dssp SCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEE---CSSCCBSCEEEEET-TEEEEECCBCSSCBCCCEEEE
T ss_pred ceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCC---CCCCcccceEEEEC-CEEEEECCCCCCcccceEEEE
Confidence 99999999999999999887778999999999999999985 89999999999995 599999999888789999999
Q ss_pred ECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceee
Q 010770 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH 238 (501)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~ 238 (501)
|+.+++|+.++ ++|.+|.+|+++.++++|||+||..... .++.++.||+.+++|+.+. .+|.+|..|
T Consensus 181 d~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~---~~p~~r~~~ 247 (301)
T 2vpj_A 181 DPHTGHWTNVT---PMATKRSGAGVALLNDHIYVVGGFDGTA-------HLSSVEAYNIRTDSWTTVT---SMTTPRCYV 247 (301)
T ss_dssp ETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEECCBCSSS-------BCCCEEEEETTTTEEEEEC---CCSSCCBSC
T ss_pred eCCCCcEEeCC---CCCcccccceEEEECCEEEEEeCCCCCc-------ccceEEEEeCCCCcEEECC---CCCCcccce
Confidence 99999999997 8999999999999999999999987643 2577888999999999997 789999999
Q ss_pred EEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEEC
Q 010770 239 TITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG 301 (501)
Q Consensus 239 s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~ 301 (501)
+++..+++||++||.+... ..+++++||+.+++|+.++.+ |.+|..|++++++
T Consensus 248 ~~~~~~~~i~v~GG~~~~~-------~~~~v~~yd~~~~~W~~~~~~---~~~r~~~~~~~~~ 300 (301)
T 2vpj_A 248 GATVLRGRLYAIAGYDGNS-------LLSSIECYDPIIDSWEVVTSM---GTQRCDAGVCVLR 300 (301)
T ss_dssp EEEEETTEEEEECCBCSSS-------BEEEEEEEETTTTEEEEEEEE---EEEEESCEEEEEE
T ss_pred eEEEECCEEEEEcCcCCCc-------ccccEEEEcCCCCeEEEcCCC---CcccccceEEEeC
Confidence 9999999999999986532 568999999999999999874 6699999998874
No 9
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=8.7e-42 Score=343.96 Aligned_cols=287 Identities=18% Similarity=0.208 Sum_probs=226.6
Q ss_pred CCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcC--CCcEEeceecCCCCCCCCCC-CCcceeEEEEeCCEEEE
Q 010770 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGP-GPRAFHIAVAIDCHMFI 91 (501)
Q Consensus 15 ~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~l~~~~~~~~~~~~p-~~R~~h~~~~~~~~iyv 91 (501)
++|.+|.+|++++++ ++|||+||... +++++||+. +++|+.++ ++| .+|.+|++++++++|||
T Consensus 5 ~lP~~r~~~~~~~~~-~~iyv~GG~~~----~~~~~~d~~~~~~~W~~~~---------~~p~~~R~~~~~~~~~~~lyv 70 (357)
T 2uvk_A 5 ETPVPFKSGTGAIDN-DTVYIGLGSAG----TAWYKLDTQAKDKKWTALA---------AFPGGPRDQATSAFIDGNLYV 70 (357)
T ss_dssp CCSSCCCSCEEEEET-TEEEEECGGGT----TCEEEEETTSSSCCEEECC---------CCTTCCCBSCEEEEETTEEEE
T ss_pred CCCccccceEEEEEC-CEEEEEeCcCC----CeEEEEccccCCCCeeECC---------CCCCCcCccceEEEECCEEEE
Confidence 589999999999887 79999999764 489999998 49999986 467 79999999999999999
Q ss_pred Eccc-c----CCCCCCcEEEEECCCCeEEEEecCCCC-CCcCCccEEEEEcCcEEEEEecCCCCc---------------
Q 010770 92 FGGR-F----GSRRLGDFWVLDTDIWQWSELTSFGDL-PSPRDFAAASAIGNRKIVMYGGWDGKK--------------- 150 (501)
Q Consensus 92 ~GG~-~----~~~~~~~~~~yd~~t~~W~~~~~~~~~-p~~r~~~~~~~~~~~~iyv~GG~~~~~--------------- 150 (501)
+||. . ....++++++||+.+++|+++++ + |.+|..|++++++ ++||++||.+...
T Consensus 71 ~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~---~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~~ 146 (357)
T 2uvk_A 71 FGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMS---HAPMGMAGHVTFVHN-GKAYVTGGVNQNIFNGYFEDLNEAGKDS 146 (357)
T ss_dssp ECCEEECTTSCEEECCCEEEEETTTTEEEECSC---CCSSCCSSEEEEEET-TEEEEEECCCHHHHHHHHHHHHHHTTCH
T ss_pred EcCCCCCCCccceeeccEEEEeCCCCcEEECCC---CCCcccccceEEEEC-CEEEEEeCcCCCcCcccccchhhcCCcc
Confidence 9998 3 13458999999999999999986 4 4999999999975 5999999986432
Q ss_pred -------------------ccccEEEEECCCCceEEcccCCCCCCCC-cceeEEEeCCEEEEEcccCCCCCccccccccc
Q 010770 151 -------------------WLSDVYVLDTISLEWMQLPVTGSVPPPR-CGHTATMVEKRLLIYGGRGGGGPIMGDLWALK 210 (501)
Q Consensus 151 -------------------~~~~~~~yd~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~ 210 (501)
..+++++||+.+++|+.++ ++|.+| .+|++++++++|||+||....+.. .+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~---~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~------~~ 217 (357)
T 2uvk_A 147 TAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAG---ESPWYGTAGAAVVNKGDKTWLINGEAKPGLR------TD 217 (357)
T ss_dssp HHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEE---ECSSCCCBSCEEEEETTEEEEECCEEETTEE------CC
T ss_pred cchhhhhhhhccccccccCCcccEEEEeCCCCcEEECC---CCCCCCcccccEEEECCEEEEEeeecCCCcc------cC
Confidence 4689999999999999997 788765 459999999999999998654433 34
Q ss_pred ccccccC--CCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCC----------cccccccCeEEEEEcCCCc
Q 010770 211 GLIEEEN--ETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWL----------SRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 211 ~~~~Yd~--~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~----------~~~~~~~~~v~~yd~~~~~ 278 (501)
.++.||+ .+++|+.+... +.|.+|.+|+++..+++|||+||.+..+.. .......+++++||+.+++
T Consensus 218 ~v~~~d~d~~~~~W~~~~~~-~~~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~ 296 (357)
T 2uvk_A 218 AVFELDFTGNNLKWNKLAPV-SSPDGVAGGFAGISNDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGK 296 (357)
T ss_dssp CEEEEECC---CEEEECCCS-STTTCCBSCEEEEETTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---
T ss_pred ceEEEEecCCCCcEEecCCC-CCCcccccceEEEECCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCc
Confidence 4555654 99999999732 334556788899999999999997532200 0001234689999999999
Q ss_pred eEEcccCCCCCCcccceEEEEECCEEEEEccCCCCC-ccCcEEEecCCCCccccceecC
Q 010770 279 WKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGKS-TFGDIWWLVPEEDPIAKRYTES 336 (501)
Q Consensus 279 W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~-~~~d~w~~~~~~d~~~~~w~~~ 336 (501)
|+.++. .|.+|..|+++.++++||||||.+... .++|+|.|.+. .++|...
T Consensus 297 W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~v~~l~~~----~~~~~~~ 348 (357)
T 2uvk_A 297 WDKSGE---LSQGRAYGVSLPWNNSLLIIGGETAGGKAVTDSVLITVK----DNKVTVQ 348 (357)
T ss_dssp CEEEEE---CSSCCBSSEEEEETTEEEEEEEECGGGCEEEEEEEEEC-----CCSCEEE
T ss_pred eeeCCC---CCCCcccceeEEeCCEEEEEeeeCCCCCEeeeEEEEEEc----CcEeEee
Confidence 999987 466999999999999999999988654 46899977765 7777755
No 10
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=340.15 Aligned_cols=271 Identities=20% Similarity=0.233 Sum_probs=230.1
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccC----C--CccCCceEEEEcCCCcEEeceecCCCCCCCCCCC
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLV----D--KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~----~--~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~ 75 (501)
-+|.. ++ .+.|.+|.+|++++++ ++|||+||.. . ....+++++||+.+++|+.++ ++|.
T Consensus 23 ~~W~~-~~----~~~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 87 (315)
T 4asc_A 23 NECYC-AS----LSSQVPKNHVSLVTKE-NQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMP---------PLPS 87 (315)
T ss_dssp TEEEE-EE----CCCCSCSSEEEEECTT-CCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEECC---------CBSS
T ss_pred CeEec-CC----CCCCCCccceEEEEEC-CEEEEEcCcccCCCCCccccccceEEecCCCCeEEECC---------CCCc
Confidence 36876 32 2346789999999887 7999999972 1 223467999999999999975 5789
Q ss_pred CcceeEEEEeCCEEEEEcccc---CCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecC-CCCcc
Q 010770 76 PRAFHIAVAIDCHMFIFGGRF---GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW-DGKKW 151 (501)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~-~~~~~ 151 (501)
+|.+|++++++++|||+||.+ +...++++++||+.+++|+.+++ +|.+|..|+++++++ +||++||. .....
T Consensus 88 ~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~ 163 (315)
T 4asc_A 88 PRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDP---LPYVVYGHTVLSHMD-LVYVIGGKGSDRKC 163 (315)
T ss_dssp CEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCC---CSSCCBSCEEEEETT-EEEEECCBCTTSCB
T ss_pred chhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCC---CCCcccceeEEEECC-EEEEEeCCCCCCcc
Confidence 999999999999999999985 36678999999999999999984 999999999999865 99999998 55667
Q ss_pred cccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCC
Q 010770 152 LSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQA 231 (501)
Q Consensus 152 ~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~ 231 (501)
.+++++||+.+++|+.++ ++|.+|.+|+++.++++|||+||....+ .++.+++||+.+++|+.++ ++
T Consensus 164 ~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~ 230 (315)
T 4asc_A 164 LNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTG-------LTSSAEVYSITDNKWAPFE---AF 230 (315)
T ss_dssp CCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSS-------EEEEEEEEETTTTEEEEEC---CC
T ss_pred cceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCC-------ccceEEEEECCCCeEEECC---CC
Confidence 899999999999999998 8999999999999999999999987654 3577889999999999998 78
Q ss_pred CCCceeeEEEEeCCEEEEEcCCCCCCC--CcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEcc
Q 010770 232 PSSRCGHTITSGGHYLLLFGGHGTGGW--LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (501)
Q Consensus 232 p~~r~~~s~~~~~~~i~v~GG~~~~~~--~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG 309 (501)
|.+|..|+++..+++||++||.+.... ........+++|+||+.+++|+.+ +|.+|..|++++++++||++..
T Consensus 231 p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~l~v~~~ 305 (315)
T 4asc_A 231 PQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGV-----LREIAYAAGATFLPVRLNVLRL 305 (315)
T ss_dssp SSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEE-----ESCSSCCSSCEEEEEEECGGGS
T ss_pred CCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhh-----ccCCcCccceEEeCCEEEEEEe
Confidence 999999999999999999999753100 000113578999999999999999 2458999999999999999975
No 11
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=2.9e-41 Score=334.82 Aligned_cols=271 Identities=20% Similarity=0.252 Sum_probs=227.8
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccCC---C---ccCCceEEEEcCCCcEEeceecCCCCCCCCCCC
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVD---K---RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~~---~---~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~ 75 (501)
-+|...+. ..|.+|.+|+++.++ ++|||+||... . ...+++++||+.+++|..++ ++|.
T Consensus 34 ~~W~~~~~-----~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~---------~~p~ 98 (318)
T 2woz_A 34 NECYLTAL-----AEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLP---------PLPS 98 (318)
T ss_dssp TEEEEEEE-----CTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECS---------CBSS
T ss_pred CceecccC-----CccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECC---------CCCc
Confidence 36887432 346789999998877 79999999631 1 22345999999999999985 5788
Q ss_pred CcceeEEEEeCCEEEEEcccc--CCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCC-CCccc
Q 010770 76 PRAFHIAVAIDCHMFIFGGRF--GSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWL 152 (501)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~--~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~ 152 (501)
+|..|++++++++|||+||.. +...++++++||+.+++|+.+++ +|.+|..|++++++ ++||++||.. .....
T Consensus 99 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~-~~iyv~GG~~~~~~~~ 174 (318)
T 2woz_A 99 ARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKN---LPIKVYGHNVISHN-GMIYCLGGKTDDKKCT 174 (318)
T ss_dssp CBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECC---CSSCEESCEEEEET-TEEEEECCEESSSCBC
T ss_pred cccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCC---CCCcccccEEEEEC-CEEEEEcCCCCCCCcc
Confidence 999999999999999999986 45668899999999999999984 99999999999985 5999999984 34568
Q ss_pred ccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCC
Q 010770 153 SDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP 232 (501)
Q Consensus 153 ~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p 232 (501)
+++++||+.+++|+.++ ++|.+|..|++++++++|||+||....+ .++.+++||+.+++|+.+. ++|
T Consensus 175 ~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~-------~~~~~~~yd~~~~~W~~~~---~~p 241 (318)
T 2woz_A 175 NRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIVIAGGVTEDG-------LSASVEAFDLKTNKWEVMT---EFP 241 (318)
T ss_dssp CCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEEEEEEEETTE-------EEEEEEEEETTTCCEEECC---CCS
T ss_pred ceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEEEEcCcCCCC-------ccceEEEEECCCCeEEECC---CCC
Confidence 89999999999999998 8999999999999999999999987643 3577889999999999997 789
Q ss_pred CCceeeEEEEeCCEEEEEcCCCCCCCCc--ccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEcc
Q 010770 233 SSRCGHTITSGGHYLLLFGGHGTGGWLS--RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (501)
Q Consensus 233 ~~r~~~s~~~~~~~i~v~GG~~~~~~~~--~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG 309 (501)
.+|..|+++..+++||++||........ ......+++|+||+.+++|+.+ .|.+|..|++++++++|||+..
T Consensus 242 ~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~-----~~~~r~~~~~~~~~~~iyi~~~ 315 (318)
T 2woz_A 242 QERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGM-----LKEIRYASGASCLATRLNLFKL 315 (318)
T ss_dssp SCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEE-----ESCCGGGTTCEEEEEEEEGGGC
T ss_pred CcccceEEEEECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhh-----cccccccccceeeCCEEEEEEe
Confidence 9999999999999999999986421000 0113578999999999999999 3568999999999999999853
No 12
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=100.00 E-value=5.7e-41 Score=332.24 Aligned_cols=261 Identities=20% Similarity=0.352 Sum_probs=223.1
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEcccc----C--CCCCCcE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF----G--SRRLGDF 104 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~----~--~~~~~~~ 104 (501)
+.||++|| +++++||+.+++|.. ... +.|.+|.+|++++++++|||+||.. . ....+++
T Consensus 5 ~~l~~~GG-------~~~~~yd~~~~~W~~-~~~-------~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~ 69 (315)
T 4asc_A 5 DLIFMISE-------EGAVAYDPAANECYC-ASL-------SSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYF 69 (315)
T ss_dssp EEEEEEET-------TEEEEEETTTTEEEE-EEC-------CCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEE
T ss_pred eEEEEEcC-------CceEEECCCCCeEec-CCC-------CCCCCccceEEEEECCEEEEEcCcccCCCCCccccccce
Confidence 67999999 689999999999987 322 3477999999999999999999973 1 2234569
Q ss_pred EEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCC---CCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 105 WVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD---GKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 105 ~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~---~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
++||+.+++|+.+++ +|.+|..|+++++++ +||++||.+ +....+++++||+.+++|+.++ ++|.+|.+|
T Consensus 70 ~~~d~~~~~W~~~~~---~p~~r~~~~~~~~~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~ 142 (315)
T 4asc_A 70 LQFDHLDSEWLGMPP---LPSPRCLFGLGEALN-SIYVVGGREIKDGERCLDSVMCYDRLSFKWGESD---PLPYVVYGH 142 (315)
T ss_dssp EEEETTTTEEEECCC---BSSCEESCEEEEETT-EEEEECCEESSTTCCBCCCEEEEETTTTEEEECC---CCSSCCBSC
T ss_pred EEecCCCCeEEECCC---CCcchhceeEEEECC-EEEEEeCCcCCCCCcccceEEEECCCCCcEeECC---CCCCcccce
Confidence 999999999999874 999999999999955 999999974 3567899999999999999998 899999999
Q ss_pred eEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcc
Q 010770 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSR 261 (501)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~ 261 (501)
+++.++++|||+||...... .++.+++||+.+++|+.++ ++|.+|..|+++..+++||++||.+..+
T Consensus 143 ~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~---- 209 (315)
T 4asc_A 143 TVLSHMDLVYVIGGKGSDRK------CLNKMCVYDPKKFEWKELA---PMQTARSLFGATVHDGRIIVAAGVTDTG---- 209 (315)
T ss_dssp EEEEETTEEEEECCBCTTSC------BCCCEEEEETTTTEEEECC---CCSSCCBSCEEEEETTEEEEEEEECSSS----
T ss_pred eEEEECCEEEEEeCCCCCCc------ccceEEEEeCCCCeEEECC---CCCCchhceEEEEECCEEEEEeccCCCC----
Confidence 99999999999999854433 3466778899999999998 7899999999999999999999987643
Q ss_pred cccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCC---------CccCcEEEecCCCCccccc
Q 010770 262 YDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDIWWLVPEEDPIAKR 332 (501)
Q Consensus 262 ~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~---------~~~~d~w~~~~~~d~~~~~ 332 (501)
..+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.++. ..++++|.| |+.+++
T Consensus 210 ---~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~y----d~~~~~ 279 (315)
T 4asc_A 210 ---LTSSAEVYSITDNKWAPFEA---FPQERSSLSLVSLVGTLYAIGGFATLETESGELVPTELNDIWRY----NEEEKK 279 (315)
T ss_dssp ---EEEEEEEEETTTTEEEEECC---CSSCCBSCEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEE----ETTTTE
T ss_pred ---ccceEEEEECCCCeEEECCC---CCCcccceeEEEECCEEEEECCccccCcCCccccccccCcEEEe----cCCCCh
Confidence 67899999999999999986 46799999999999999999998542 245677755 555888
Q ss_pred eecC
Q 010770 333 YTES 336 (501)
Q Consensus 333 w~~~ 336 (501)
|+..
T Consensus 280 W~~~ 283 (315)
T 4asc_A 280 WEGV 283 (315)
T ss_dssp EEEE
T ss_pred hhhh
Confidence 9876
No 13
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=100.00 E-value=1.9e-40 Score=328.96 Aligned_cols=271 Identities=19% Similarity=0.309 Sum_probs=228.5
Q ss_pred CCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEcccc
Q 010770 17 PQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF 96 (501)
Q Consensus 17 P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~ 96 (501)
..+|.++... +.||++||. ++++||+.+++|...+ . +.|.+|..|+++.++++||++||..
T Consensus 6 ~~~r~~~~~~----~~i~~~GG~-------~~~~yd~~~~~W~~~~-~-------~~~~~r~~~~~~~~~~~lyv~GG~~ 66 (318)
T 2woz_A 6 DIPRHGMFVK----DLILLVNDT-------AAVAYDPMENECYLTA-L-------AEQIPRNHSSIVTQQNQVYVVGGLY 66 (318)
T ss_dssp SSCCCCCSEE----EEEEEECSS-------EEEEEETTTTEEEEEE-E-------CTTSCSSEEEEECSSSCEEEEESSC
T ss_pred ccccccceec----chhhhcccc-------ceEEECCCCCceeccc-C-------CccCCccceEEEEECCEEEEECCcc
Confidence 3577776553 689999993 4899999999999843 2 3468899999999999999999963
Q ss_pred C------CCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCC--CCcccccEEEEECCCCceEEc
Q 010770 97 G------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD--GKKWLSDVYVLDTISLEWMQL 168 (501)
Q Consensus 97 ~------~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~--~~~~~~~~~~yd~~t~~W~~~ 168 (501)
. ....+++++||+.+++|..++ .+|.+|..|+++++++ +||++||.. .....+++++||+.+++|+.+
T Consensus 67 ~~~~~~~~~~~~~~~~~d~~~~~W~~~~---~~p~~r~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~ 142 (318)
T 2woz_A 67 VDEENKDQPLQSYFFQLDNVSSEWVGLP---PLPSARCLFGLGEVDD-KIYVVAGKDLQTEASLDSVLCYDPVAAKWSEV 142 (318)
T ss_dssp C-------CCCBEEEEEETTTTEEEECS---CBSSCBCSCEEEEETT-EEEEEEEEBTTTCCEEEEEEEEETTTTEEEEE
T ss_pred cCccccCCCccccEEEEeCCCCcEEECC---CCCccccccceEEECC-EEEEEcCccCCCCcccceEEEEeCCCCCEeEC
Confidence 1 122345999999999999997 4999999999999955 999999986 456788999999999999999
Q ss_pred ccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEE
Q 010770 169 PVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLL 248 (501)
Q Consensus 169 ~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~ 248 (501)
+ ++|.+|.+|++++++++|||+||...... .++.+++||+.+++|+.++ ++|.+|..|++++.+++||
T Consensus 143 ~---~~p~~r~~~~~~~~~~~iyv~GG~~~~~~------~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~iy 210 (318)
T 2woz_A 143 K---NLPIKVYGHNVISHNGMIYCLGGKTDDKK------CTNRVFIYNPKKGDWKDLA---PMKTPRSMFGVAIHKGKIV 210 (318)
T ss_dssp C---CCSSCEESCEEEEETTEEEEECCEESSSC------BCCCEEEEETTTTEEEEEC---CCSSCCBSCEEEEETTEEE
T ss_pred C---CCCCcccccEEEEECCEEEEEcCCCCCCC------ccceEEEEcCCCCEEEECC---CCCCCcccceEEEECCEEE
Confidence 8 89999999999999999999999865433 2466778899999999998 7899999999999999999
Q ss_pred EEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCC---------CccCcE
Q 010770 249 LFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK---------STFGDI 319 (501)
Q Consensus 249 v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~---------~~~~d~ 319 (501)
|+||.... ...+++++||+.+++|+.++. .|.+|..|+++.++++|||+||.+.. ...+|+
T Consensus 211 v~GG~~~~-------~~~~~~~~yd~~~~~W~~~~~---~p~~r~~~~~~~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v 280 (318)
T 2woz_A 211 IAGGVTED-------GLSASVEAFDLKTNKWEVMTE---FPQERSSISLVSLAGSLYAIGGFAMIQLESKEFAPTEVNDI 280 (318)
T ss_dssp EEEEEETT-------EEEEEEEEEETTTCCEEECCC---CSSCCBSCEEEEETTEEEEECCBCCBC----CCBCCBCCCE
T ss_pred EEcCcCCC-------CccceEEEEECCCCeEEECCC---CCCcccceEEEEECCEEEEECCeeccCCCCceeccceeeeE
Confidence 99998753 267899999999999999987 46699999999999999999998752 346888
Q ss_pred EEecCCCCccccceecC
Q 010770 320 WWLVPEEDPIAKRYTES 336 (501)
Q Consensus 320 w~~~~~~d~~~~~w~~~ 336 (501)
|.|+ +.+++|+..
T Consensus 281 ~~yd----~~~~~W~~~ 293 (318)
T 2woz_A 281 WKYE----DDKKEWAGM 293 (318)
T ss_dssp EEEE----TTTTEEEEE
T ss_pred EEEe----CCCCEehhh
Confidence 8655 557888866
No 14
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.5e-38 Score=345.10 Aligned_cols=286 Identities=18% Similarity=0.193 Sum_probs=230.4
Q ss_pred CCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEece-ecCCCCCCCCCCCCcceeEEEEe--CCEEEE
Q 010770 15 TVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPE-CTGNGSNGQVGPGPRAFHIAVAI--DCHMFI 91 (501)
Q Consensus 15 ~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~-~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv 91 (501)
..|.+|++|+++ ++ ++|||+||... ..++++++||+.+++|+.++ ..+ ...+|.+|.+|+++++ +++|||
T Consensus 384 ~~p~rr~g~~~~-~~-~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p----~~~~p~~R~~hs~~~~~~~~~lyv 456 (695)
T 2zwa_A 384 CPINRKFGDVDV-AG-NDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVS----SSEVPVARMCHTFTTISRNNQLLL 456 (695)
T ss_dssp CTTCCBSCEEEE-CS-SCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCC----CSCCCCCCBSCEEEEETTTTEEEE
T ss_pred CCCCCceeEEEE-EC-CEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCC----CCCCCccccceEEEEEccCCEEEE
Confidence 356778877655 55 78999999987 78899999999999999987 421 1247999999999999 999999
Q ss_pred EccccCCC-CCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEccc
Q 010770 92 FGGRFGSR-RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPV 170 (501)
Q Consensus 92 ~GG~~~~~-~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~ 170 (501)
+||.+... .++++|+||+.+++|+.++ ++|.+|..|+++++.+++|||+||.+... ++++||+.+++|+.++.
T Consensus 457 ~GG~~~~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~---~v~~yd~~t~~W~~~~~ 530 (695)
T 2zwa_A 457 IGGRKAPHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP---AMLLYNVTEEIFKDVTP 530 (695)
T ss_dssp ECCBSSTTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC---SEEEEETTTTEEEECCC
T ss_pred EcCCCCCCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC---CEEEEECCCCceEEccC
Confidence 99998744 7899999999999999997 49999999999997566999999987665 89999999999999997
Q ss_pred CCCCCCCCcceeEEEeC---CEEEEEcccCCCCCcccccccccccccccCCCCc------eEEeecCCCCCCCceeeEEE
Q 010770 171 TGSVPPPRCGHTATMVE---KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG------WTQLKLPGQAPSSRCGHTIT 241 (501)
Q Consensus 171 ~~~~p~~r~~~~~~~~~---~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~------W~~~~~~g~~p~~r~~~s~~ 241 (501)
.+.+|.+|.+|++++++ ++|||+||....+.. .++.+++||+.+++ |+.+.. .++.+|.+|+++
T Consensus 531 ~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~-----~~~~v~~yd~~~~~w~~~~~W~~~~~--~p~~~R~~~~~~ 603 (695)
T 2zwa_A 531 KDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTT-----VSDKAIIFKYDAENATEPITVIKKLQ--HPLFQRYGSQIK 603 (695)
T ss_dssp SSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSC-----BCCEEEEEEECTTCSSCCEEEEEEEE--CGGGCCBSCEEE
T ss_pred CCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCe-----eeCcEEEEEccCCccccceEEEEcCC--CCCCCcccceEE
Confidence 77799999999988876 899999998654311 34677888999999 888873 135889999999
Q ss_pred EeC-CEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCC----CCCcccceEEEEECC-EEEEEccCCCCCc
Q 010770 242 SGG-HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNE----PPPARAYHSMTCLGS-LYLLFGGFDGKST 315 (501)
Q Consensus 242 ~~~-~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~----~p~~r~~~~~~~~~~-~iyv~GG~~~~~~ 315 (501)
+.+ ++|||+||.+.... ....+++++||+.+++|+.+..... +++.+.+|+++.+++ +|||+||...+..
T Consensus 604 ~~~~~~iyv~GG~~~~~~----~~~~~~v~~yd~~t~~W~~~~~p~~~~~~~~p~~~gh~~~~~~~g~i~v~GGg~~cfs 679 (695)
T 2zwa_A 604 YITPRKLLIVGGTSPSGL----FDRTNSIISLDPLSETLTSIPISRRIWEDHSLMLAGFSLVSTSMGTIHIIGGGATCYG 679 (695)
T ss_dssp EEETTEEEEECCBCSSCC----CCTTTSEEEEETTTTEEEECCCCHHHHHHSCCCCSSCEEECC---CEEEECCEEECTT
T ss_pred EeCCCEEEEECCccCCCC----CCCCCeEEEEECCCCeEEEeeccccccCCCCccceeeeEEEeCCCEEEEEeCCccCcC
Confidence 998 99999999865331 1357899999999999996543211 123677899988876 9999999654432
Q ss_pred ----cCcEEEecC
Q 010770 316 ----FGDIWWLVP 324 (501)
Q Consensus 316 ----~~d~w~~~~ 324 (501)
++++|.+++
T Consensus 680 fGt~~n~i~~ldl 692 (695)
T 2zwa_A 680 FGSVTNVGLKLIA 692 (695)
T ss_dssp SCEEECCCEEEEE
T ss_pred ccccccceEEEEE
Confidence 456666654
No 15
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=100.00 E-value=6.2e-36 Score=301.18 Aligned_cols=253 Identities=21% Similarity=0.283 Sum_probs=201.1
Q ss_pred cceEEeeeCCCCCCCC-CCCcCcEEEEECCcEEEEEccc-C----CCccCCceEEEEcCCCcEEeceecCCCCCCCCCCC
Q 010770 2 HYWVRASSSDFGGTVP-QPRSGHSAVNIGKSKVVVFGGL-V----DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P-~~R~~h~~~~~~~~~iyv~GG~-~----~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~ 75 (501)
.+|+++++ +| .+|.+|++++++ ++||||||. . ....++++++||+.+++|+.++.. .|.
T Consensus 43 ~~W~~~~~------~p~~~R~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~--------~p~ 107 (357)
T 2uvk_A 43 KKWTALAA------FPGGPRDQATSAFID-GNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNSWVKLMSH--------APM 107 (357)
T ss_dssp CCEEECCC------CTTCCCBSCEEEEET-TEEEEECCEEECTTSCEEECCCEEEEETTTTEEEECSCC--------CSS
T ss_pred CCeeECCC------CCCCcCccceEEEEC-CEEEEEcCCCCCCCccceeeccEEEEeCCCCcEEECCCC--------CCc
Confidence 47999864 78 899999999998 799999998 3 235689999999999999998743 258
Q ss_pred CcceeEEEEeCCEEEEEccccCC----------------------------------CCCCcEEEEECCCCeEEEEecCC
Q 010770 76 PRAFHIAVAIDCHMFIFGGRFGS----------------------------------RRLGDFWVLDTDIWQWSELTSFG 121 (501)
Q Consensus 76 ~R~~h~~~~~~~~iyv~GG~~~~----------------------------------~~~~~~~~yd~~t~~W~~~~~~~ 121 (501)
+|.+|++++++++|||+||.+.. ..++++++||+.+++|+.+.+
T Consensus 108 ~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~-- 185 (357)
T 2uvk_A 108 GMAGHVTFVHNGKAYVTGGVNQNIFNGYFEDLNEAGKDSTAIDKINAHYFDKKAEDYFFNKFLLSFDPSTQQWSYAGE-- 185 (357)
T ss_dssp CCSSEEEEEETTEEEEEECCCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHSSCGGGGCCCCEEEEEETTTTEEEEEEE--
T ss_pred ccccceEEEECCEEEEEeCcCCCcCcccccchhhcCCcccchhhhhhhhccccccccCCcccEEEEeCCCCcEEECCC--
Confidence 99999999999999999998643 256899999999999999975
Q ss_pred CCCCcCCc-cEEEEEcCcEEEEEecCCCC-cccccEEEEEC--CCCceEEcccCCCCCCC--CcceeEEEeCCEEEEEcc
Q 010770 122 DLPSPRDF-AAASAIGNRKIVMYGGWDGK-KWLSDVYVLDT--ISLEWMQLPVTGSVPPP--RCGHTATMVEKRLLIYGG 195 (501)
Q Consensus 122 ~~p~~r~~-~~~~~~~~~~iyv~GG~~~~-~~~~~~~~yd~--~t~~W~~~~~~~~~p~~--r~~~~~~~~~~~lyv~GG 195 (501)
+|.+|.. |+++++++ +|||+||.+.. ...+++++||+ .+++|+.++ ++|.+ |.+|++++++++|||+||
T Consensus 186 -~p~~~~~~~~~~~~~~-~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W~~~~---~~~~~~~~~~~~~~~~~~~iyv~GG 260 (357)
T 2uvk_A 186 -SPWYGTAGAAVVNKGD-KTWLINGEAKPGLRTDAVFELDFTGNNLKWNKLA---PVSSPDGVAGGFAGISNDSLIFAGG 260 (357)
T ss_dssp -CSSCCCBSCEEEEETT-EEEEECCEEETTEECCCEEEEECC---CEEEECC---CSSTTTCCBSCEEEEETTEEEEECC
T ss_pred -CCCCCcccccEEEECC-EEEEEeeecCCCcccCceEEEEecCCCCcEEecC---CCCCCcccccceEEEECCEEEEEcC
Confidence 8876655 88888854 99999997644 35778999987 999999997 55444 668889999999999999
Q ss_pred cCCCCCc----------ccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccc
Q 010770 196 RGGGGPI----------MGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (501)
Q Consensus 196 ~~~~~~~----------~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (501)
....+.. ....-.++.+++||+.+++|+.+. .+|.+|..|+++..+++|||+||.+..+ ..
T Consensus 261 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~---~~p~~r~~~~~~~~~~~i~v~GG~~~~~------~~ 331 (357)
T 2uvk_A 261 AGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSG---ELSQGRAYGVSLPWNNSLLIIGGETAGG------KA 331 (357)
T ss_dssp EECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEE---ECSSCCBSSEEEEETTEEEEEEEECGGG------CE
T ss_pred ccccCCcccccccceeccccccceeeEEEEecCCCceeeCC---CCCCCcccceeEEeCCEEEEEeeeCCCC------CE
Confidence 7543210 111123467889999999999997 7899999999999999999999987543 35
Q ss_pred cCeEEEEEcCCCceEEcccC
Q 010770 266 YNDTIILDRLSAQWKRLPIG 285 (501)
Q Consensus 266 ~~~v~~yd~~~~~W~~v~~~ 285 (501)
.+++++|+.++++|......
T Consensus 332 ~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 332 VTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp EEEEEEEEC-CCSCEEEC--
T ss_pred eeeEEEEEEcCcEeEeeecc
Confidence 68999999999999988764
No 16
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=100.00 E-value=2.4e-33 Score=305.81 Aligned_cols=238 Identities=16% Similarity=0.196 Sum_probs=202.2
Q ss_pred CCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEe-c--CCCCCCcCCccEEEEEc-CcEEEEEecCCC
Q 010770 73 GPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELT-S--FGDLPSPRDFAAASAIG-NRKIVMYGGWDG 148 (501)
Q Consensus 73 ~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~-~--~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~ 148 (501)
.|.+|++|++ +++++|||+||... ..++++++||+.+++|+.++ + .+.+|.+|.+|+++++. +++|||+||.+.
T Consensus 385 ~p~rr~g~~~-~~~~~iyv~GG~~~-~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~ 462 (695)
T 2zwa_A 385 PINRKFGDVD-VAGNDVFYMGGSNP-YRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKA 462 (695)
T ss_dssp TTCCBSCEEE-ECSSCEEEECCBSS-SBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSS
T ss_pred CCCCceeEEE-EECCEEEEECCCCC-CCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCC
Confidence 4666766554 48999999999987 78899999999999999998 4 35689999999999994 559999999876
Q ss_pred Cc-ccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEee
Q 010770 149 KK-WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (501)
Q Consensus 149 ~~-~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~ 226 (501)
.. .++++|+||+.+++|+.++ ++|.+|.+|+++++ +++|||+||..... .+++||+.+++|+.+.
T Consensus 463 ~~~~~~dv~~yd~~t~~W~~~~---~~p~~R~~h~~~~~~~~~iyv~GG~~~~~----------~v~~yd~~t~~W~~~~ 529 (695)
T 2zwa_A 463 PHQGLSDNWIFDMKTREWSMIK---SLSHTRFRHSACSLPDGNVLILGGVTEGP----------AMLLYNVTEEIFKDVT 529 (695)
T ss_dssp TTCBCCCCEEEETTTTEEEECC---CCSBCCBSCEEEECTTSCEEEECCBCSSC----------SEEEEETTTTEEEECC
T ss_pred CCCccccEEEEeCCCCcEEECC---CCCCCcccceEEEEcCCEEEEECCCCCCC----------CEEEEECCCCceEEcc
Confidence 54 7899999999999999997 89999999999997 99999999986542 5778899999999999
Q ss_pred cCCCCCCCceeeEEEEeC---CEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc------eEEcccCCCCCCcccceEE
Q 010770 227 LPGQAPSSRCGHTITSGG---HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ------WKRLPIGNEPPPARAYHSM 297 (501)
Q Consensus 227 ~~g~~p~~r~~~s~~~~~---~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~------W~~v~~~~~~p~~r~~~~~ 297 (501)
..+.+|.+|.+|++++++ ++|||+||...++ ....+++|+||+.+++ |+.+..+ ++.+|..|++
T Consensus 530 ~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~-----~~~~~~v~~yd~~~~~w~~~~~W~~~~~~--p~~~R~~~~~ 602 (695)
T 2zwa_A 530 PKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQ-----TTVSDKAIIFKYDAENATEPITVIKKLQH--PLFQRYGSQI 602 (695)
T ss_dssp CSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTS-----SCBCCEEEEEEECTTCSSCCEEEEEEEEC--GGGCCBSCEE
T ss_pred CCCCCCCcccceeEEEEeCCCCEEEEECCcCCCC-----CeeeCcEEEEEccCCccccceEEEEcCCC--CCCCcccceE
Confidence 777799999999977755 8999999986543 2467999999999999 8888774 3579999999
Q ss_pred EEEC-CEEEEEccCCCCC---ccCcEEEecCCCCccccceecC
Q 010770 298 TCLG-SLYLLFGGFDGKS---TFGDIWWLVPEEDPIAKRYTES 336 (501)
Q Consensus 298 ~~~~-~~iyv~GG~~~~~---~~~d~w~~~~~~d~~~~~w~~~ 336 (501)
++++ ++|||+||.++.. ..+++|.|+ +.+++|+..
T Consensus 603 ~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd----~~t~~W~~~ 641 (695)
T 2zwa_A 603 KYITPRKLLIVGGTSPSGLFDRTNSIISLD----PLSETLTSI 641 (695)
T ss_dssp EEEETTEEEEECCBCSSCCCCTTTSEEEEE----TTTTEEEEC
T ss_pred EEeCCCEEEEECCccCCCCCCCCCeEEEEE----CCCCeEEEe
Confidence 9999 9999999987654 478887655 557788844
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=100.00 E-value=9.9e-32 Score=292.23 Aligned_cols=277 Identities=16% Similarity=0.163 Sum_probs=209.9
Q ss_pred ceEEeeeCCCCCCCCCCCcCcEEEEEC-CcEEEEEcccCCCc------cCCceEEEEcCCCcEEeceecCCCCCCCCCCC
Q 010770 3 YWVRASSSDFGGTVPQPRSGHSAVNIG-KSKVVVFGGLVDKR------FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPG 75 (501)
Q Consensus 3 ~W~~~~~~~~~g~~P~~R~~h~~~~~~-~~~iyv~GG~~~~~------~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~ 75 (501)
+|..+.+ .||.+|+++++. +++||++||..... ..+++++||+.+++|+.+.. +|.
T Consensus 177 ~W~~~~~--------~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~---------~~~ 239 (656)
T 1k3i_A 177 RWGPTID--------LPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTV---------TVT 239 (656)
T ss_dssp EEEEEEE--------CSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEE---------EEC
T ss_pred eeeeecc--------CCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcc---------cCC
Confidence 6888764 455777777773 58999999986532 23579999999999999874 355
Q ss_pred Cccee--EEEE-eCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEec-CCCCcc
Q 010770 76 PRAFH--IAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG-WDGKKW 151 (501)
Q Consensus 76 ~R~~h--~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG-~~~~~~ 151 (501)
+|..| ++++ .+++||++||.... ++++||+.+++|++++ .+|.+|..|+++++.+++||++|| .++...
T Consensus 240 ~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~ 312 (656)
T 1k3i_A 240 KHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGGSWSGGVF 312 (656)
T ss_dssp SCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECCCCCSSSC
T ss_pred CCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeCcccCCcc
Confidence 55444 3444 58999999997653 7999999999999997 499999999999986679999999 566667
Q ss_pred cccEEEEECCCCceEEcccCC--CCCCC----------------------------------------------------
Q 010770 152 LSDVYVLDTISLEWMQLPVTG--SVPPP---------------------------------------------------- 177 (501)
Q Consensus 152 ~~~~~~yd~~t~~W~~~~~~~--~~p~~---------------------------------------------------- 177 (501)
.+++++||+.+++|+.++..+ +++..
T Consensus 313 ~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~ 392 (656)
T 1k3i_A 313 EKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNR 392 (656)
T ss_dssp CCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETT
T ss_pred cccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCcccccc
Confidence 889999999999999973211 12211
Q ss_pred -----CcceeEEE---eCCEEEEEcccCCC--CCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe-CCE
Q 010770 178 -----RCGHTATM---VEKRLLIYGGRGGG--GPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHY 246 (501)
Q Consensus 178 -----r~~~~~~~---~~~~lyv~GG~~~~--~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~ 246 (501)
+..+++++ .+++|||+||.... ....++ ...+++||+.+++|+.+. .+.+|.+|..|++++. +++
T Consensus 393 ~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~---~~~v~~yd~~~~~W~~~~-~~~mp~~R~~~~~~~l~~g~ 468 (656)
T 1k3i_A 393 GVAPDAMCGNAVMYDAVKGKILTFGGSPDYQDSDATTN---AHIITLGEPGTSPNTVFA-SNGLYFARTFHTSVVLPDGS 468 (656)
T ss_dssp EECCCCBTCEEEEEETTTTEEEEECCBSSSSSSBCCCC---EEEEECCSTTSCCEEEEC-TTCCSSCCBSCEEEECTTSC
T ss_pred ccCCCCCCCceEeccCCCCeEEEEeCCCCCCCCCcCCc---ceEEEcCCCCCCCeeEEc-cCCCCCCcccCCeEECCCCC
Confidence 22334443 48999999997531 111111 236789999999999886 3478999999998887 999
Q ss_pred EEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE--CCEEEEEccCC
Q 010770 247 LLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFD 311 (501)
Q Consensus 247 i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 311 (501)
|||+||........ .....+++++||+.+++|+.+..+ |.+|.+|+++++ +++|||+||..
T Consensus 469 i~v~GG~~~~~~~~-~~~~~~~v~~ydp~t~~W~~~~~~---~~~R~~hs~a~ll~dg~v~v~GG~~ 531 (656)
T 1k3i_A 469 TFITGGQRRGIPFE-DSTPVFTPEIYVPEQDTFYKQNPN---SIVRVYHSISLLLPDGRVFNGGGGL 531 (656)
T ss_dssp EEEECCBSBCCTTC-CCSBCCCCEEEEGGGTEEEECCCC---SSCCCTTEEEEECTTSCEEEEECCC
T ss_pred EEEECCcccCcCcC-CCCcccceEEEcCCCCceeecCCC---CCccccccHhhcCCCcEEEecCCCC
Confidence 99999976321000 124578999999999999998874 669999998888 99999999963
No 18
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=99.96 E-value=3.5e-28 Score=264.26 Aligned_cols=263 Identities=16% Similarity=0.104 Sum_probs=194.0
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCC------CCCcEEEEECCCCeEEEEe
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR------RLGDFWVLDTDIWQWSELT 118 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~------~~~~~~~yd~~t~~W~~~~ 118 (501)
++..||+.+++|..+. |.||..|+++++ +++||++||..... ..+++++||+.+++|+.+.
T Consensus 167 ~~~~~dp~~~~W~~~~-----------~~P~~~~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~ 235 (656)
T 1k3i_A 167 SYTAPQPGLGRWGPTI-----------DLPIVPAAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT 235 (656)
T ss_dssp CCCCCCTTSCEEEEEE-----------ECSSCCSEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE
T ss_pred ccccCCCCCCeeeeec-----------cCCCCceeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc
Confidence 3556788899999875 345566666666 89999999986532 2357999999999999987
Q ss_pred cCCCCCCcCCccE--EEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcc
Q 010770 119 SFGDLPSPRDFAA--ASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGG 195 (501)
Q Consensus 119 ~~~~~p~~r~~~~--~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG 195 (501)
. +|.+|..++ +++..+++||++||.... ++++||+.+++|+.++ +||.+|..|+++++ +++|||+||
T Consensus 236 ~---~~~~~~~~~~~~~~~~~g~lyv~GG~~~~----~v~~yd~~t~~W~~~~---~~~~~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 236 V---TVTKHDMFCPGISMDGNGQIVVTGGNDAK----KTSLYDSSSDSWIPGP---DMQVARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp E---EECSCCCSSCEEEECTTSCEEEECSSSTT----CEEEEEGGGTEEEECC---CCSSCCSSCEEEECTTSCEEEECC
T ss_pred c---cCCCCCCccccccCCCCCCEEEeCCCCCC----ceEEecCcCCceeECC---CCCccccccceEEecCCeEEEEeC
Confidence 5 777776654 555567899999997653 6999999999999997 89999999999999 999999999
Q ss_pred cCCCCCcccccccccccccccCCCCceEEeecCC--CCCC----------------------------------------
Q 010770 196 RGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG--QAPS---------------------------------------- 233 (501)
Q Consensus 196 ~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g--~~p~---------------------------------------- 233 (501)
...... .++.+++||+.+++|+.++..+ +++.
T Consensus 306 ~~~~~~------~~~~~e~yd~~t~~W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~ 379 (656)
T 1k3i_A 306 SWSGGV------FEKNGEVYSPSSKTWTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGS 379 (656)
T ss_dssp CCCSSS------CCCCEEEEETTTTEEEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTT
T ss_pred cccCCc------ccccceEeCCCCCcceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCc
Confidence 543322 3567788899999999873110 1111
Q ss_pred -----------------CceeeEEEE---eCCEEEEEcCCCCCCCCcccccccC---eEEEEEcCCCceEEcccCCCCCC
Q 010770 234 -----------------SRCGHTITS---GGHYLLLFGGHGTGGWLSRYDIYYN---DTIILDRLSAQWKRLPIGNEPPP 290 (501)
Q Consensus 234 -----------------~r~~~s~~~---~~~~i~v~GG~~~~~~~~~~~~~~~---~v~~yd~~~~~W~~v~~~~~~p~ 290 (501)
++..++++. .+++||++||...... ....+ .+++||+.++.|..+. ....|.
T Consensus 380 ~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~~~----~~~~~~~~~v~~yd~~~~~W~~~~-~~~mp~ 454 (656)
T 1k3i_A 380 GDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDYQD----SDATTNAHIITLGEPGTSPNTVFA-SNGLYF 454 (656)
T ss_dssp CEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSSSS----SBCCCCEEEEECCSTTSCCEEEEC-TTCCSS
T ss_pred ceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCCCC----CCcCCcceEEEcCCCCCCCeeEEc-cCCCCC
Confidence 122344443 5899999999753110 12334 7899999999999987 122577
Q ss_pred cccceEEEEE-CCEEEEEccCCC------CCccCcEEEecCCCCccccceecCCCCCCCCCC
Q 010770 291 ARAYHSMTCL-GSLYLLFGGFDG------KSTFGDIWWLVPEEDPIAKRYTESPPKVLPENK 345 (501)
Q Consensus 291 ~r~~~~~~~~-~~~iyv~GG~~~------~~~~~d~w~~~~~~d~~~~~w~~~~~~~~~~~~ 345 (501)
+|..|+++++ +++|||+||.+. ...+.+++ .||+.+++|+...+.+.++..
T Consensus 455 ~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~~~~~v~----~ydp~t~~W~~~~~~~~~R~~ 512 (656)
T 1k3i_A 455 ARTFHTSVVLPDGSTFITGGQRRGIPFEDSTPVFTPE----IYVPEQDTFYKQNPNSIVRVY 512 (656)
T ss_dssp CCBSCEEEECTTSCEEEECCBSBCCTTCCCSBCCCCE----EEEGGGTEEEECCCCSSCCCT
T ss_pred CcccCCeEECCCCCEEEECCcccCcCcCCCCcccceE----EEcCCCCceeecCCCCCcccc
Confidence 9999999888 999999999763 23355654 466778999988655555443
No 19
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.79 E-value=0.0085 Score=55.50 Aligned_cols=190 Identities=13% Similarity=0.034 Sum_probs=118.2
Q ss_pred cceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEE
Q 010770 77 RAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 77 R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 156 (501)
-+-+.....++.+|+-.|..+. +.+.++|+.+++-..-.. +|..-++.+++..+ ++||+.... .+.++
T Consensus 21 ~ftqGL~~~~~~LyestG~~g~---S~v~~vD~~tgkv~~~~~---l~~~~fgeGi~~~~-~~ly~ltw~-----~~~v~ 88 (243)
T 3mbr_X 21 AFTEGLFYLRGHLYESTGETGR---SSVRKVDLETGRILQRAE---VPPPYFGAGIVAWR-DRLIQLTWR-----NHEGF 88 (243)
T ss_dssp CCEEEEEEETTEEEEEECCTTS---CEEEEEETTTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEESS-----SSEEE
T ss_pred cccccEEEECCEEEEECCCCCC---ceEEEEECCCCCEEEEEe---CCCCcceeEEEEeC-CEEEEEEee-----CCEEE
Confidence 3445677788999999886543 478999999998765543 55555555666665 599998653 35699
Q ss_pred EEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-eecCCCCCCC-
Q 010770 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSS- 234 (501)
Q Consensus 157 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~-~~~~g~~p~~- 234 (501)
+||+.|.+-..- .+.+..+.+++..+++||+.-|. +.+..+|+.+.+-.. +... ..+.+
T Consensus 89 v~D~~tl~~~~t-----i~~~~~Gwglt~dg~~L~vSdgs-------------~~l~~iDp~t~~~~~~I~V~-~~g~~~ 149 (243)
T 3mbr_X 89 VYDLATLTPRAR-----FRYPGEGWALTSDDSHLYMSDGT-------------AVIRKLDPDTLQQVGSIKVT-AGGRPL 149 (243)
T ss_dssp EEETTTTEEEEE-----EECSSCCCEEEECSSCEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEEC
T ss_pred EEECCcCcEEEE-----EeCCCCceEEeeCCCEEEEECCC-------------CeEEEEeCCCCeEEEEEEEc-cCCccc
Confidence 999988765432 22334567777767889997652 345666998876543 3321 11111
Q ss_pred ceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE---cccCCC------CCCcccceEEEEE--CCE
Q 010770 235 RCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR---LPIGNE------PPPARAYHSMTCL--GSL 303 (501)
Q Consensus 235 r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~---v~~~~~------~p~~r~~~~~~~~--~~~ 303 (501)
+.---+...+++||+--- ..++|.+.|+.+.+-.. +..... .+..-.-.+++.. +++
T Consensus 150 ~~lNeLe~~~G~lyanvw------------~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~ 217 (243)
T 3mbr_X 150 DNLNELEWVNGELLANVW------------LTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDR 217 (243)
T ss_dssp CCEEEEEEETTEEEEEET------------TTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTE
T ss_pred ccceeeEEeCCEEEEEEC------------CCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCE
Confidence 111234456888886332 24789999999986543 332210 1112233455555 578
Q ss_pred EEEEcc
Q 010770 304 YLLFGG 309 (501)
Q Consensus 304 iyv~GG 309 (501)
+||.|-
T Consensus 218 lfVTGK 223 (243)
T 3mbr_X 218 LFVTGK 223 (243)
T ss_dssp EEEEET
T ss_pred EEEECC
Confidence 999984
No 20
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.74 E-value=0.022 Score=55.22 Aligned_cols=230 Identities=10% Similarity=0.015 Sum_probs=129.3
Q ss_pred CCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEE-EEecCCCC
Q 010770 45 LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWS-ELTSFGDL 123 (501)
Q Consensus 45 ~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~ 123 (501)
.+.+.+||+.+++....-.... + ..+.....+.++..++++|+.... .+.+.++|+.+.+-. .++. .
T Consensus 16 ~~~l~~~d~~t~~~~~~i~~~~---n-~~~lg~~~~~i~~~~~~lyv~~~~-----~~~v~viD~~t~~~~~~i~~---~ 83 (328)
T 3dsm_A 16 NATLSYYDPATCEVENEVFYRA---N-GFKLGDVAQSMVIRDGIGWIVVNN-----SHVIFAIDINTFKEVGRITG---F 83 (328)
T ss_dssp CBEEEEEETTTTEEECSHHHHH---H-SSCCBSCEEEEEEETTEEEEEEGG-----GTEEEEEETTTCCEEEEEEC---C
T ss_pred CceEEEEECCCCEEhhhhHhhh---c-CcccCccceEEEEECCEEEEEEcC-----CCEEEEEECcccEEEEEcCC---C
Confidence 4679999999998865221100 0 123334456677789999998652 357999999988763 3431 2
Q ss_pred CCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE-cccCCCCC-CCCcceeEEEeCCEEEEEcccCCCCC
Q 010770 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-LPVTGSVP-PPRCGHTATMVEKRLLIYGGRGGGGP 201 (501)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-~~~~~~~p-~~r~~~~~~~~~~~lyv~GG~~~~~~ 201 (501)
.. -+.++...++++|+.... .+.+.++|+.+.+-.. ++. +... ....-+.++..++++|+..-..
T Consensus 84 ~~---p~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~-g~~~~~~~~p~~i~~~~~~lyv~~~~~---- 150 (328)
T 3dsm_A 84 TS---PRYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIEC-PDMDMESGSTEQMVQYGKYVYVNCWSY---- 150 (328)
T ss_dssp SS---EEEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEEC-TTCCTTTCBCCCEEEETTEEEEEECTT----
T ss_pred CC---CcEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEc-CCccccCCCcceEEEECCEEEEEcCCC----
Confidence 22 234444346699998743 3569999999987653 321 1200 0002234445788999984200
Q ss_pred cccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceE
Q 010770 202 IMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (501)
Q Consensus 202 ~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 280 (501)
-+.+.++|+.+++....-..+..| +.+++ -++++|+......... .+..-.+.++++|+.+.+..
T Consensus 151 -------~~~v~viD~~t~~~~~~i~~g~~p-----~~i~~~~dG~l~v~~~~~~~~~--~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 151 -------QNRILKIDTETDKVVDELTIGIQP-----TSLVMDKYNKMWTITDGGYEGS--PYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp -------CCEEEEEETTTTEEEEEEECSSCB-----CCCEECTTSEEEEEBCCBCTTC--SSCBCCCEEEEEETTTTEEE
T ss_pred -------CCEEEEEECCCCeEEEEEEcCCCc-----cceEEcCCCCEEEEECCCccCC--ccccCCceEEEEECCCCeEE
Confidence 145667899988765433222222 22333 4578887653221110 00011368999999988765
Q ss_pred EcccCCCCCCcccceEEEEE--CCEEEEEccCCCCCccCcEEEecC
Q 010770 281 RLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDGKSTFGDIWWLVP 324 (501)
Q Consensus 281 ~v~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~d~w~~~~ 324 (501)
..-.. |.......++.. ++.+|+..+ .+|.++.
T Consensus 217 ~~~~~---~~g~~p~~la~~~d~~~lyv~~~--------~v~~~d~ 251 (328)
T 3dsm_A 217 KQFKF---KLGDWPSEVQLNGTRDTLYWINN--------DIWRMPV 251 (328)
T ss_dssp EEEEC---CTTCCCEEEEECTTSCEEEEESS--------SEEEEET
T ss_pred EEEec---CCCCCceeEEEecCCCEEEEEcc--------EEEEEEC
Confidence 43222 112233455554 577888753 5665554
No 21
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=97.59 E-value=0.0081 Score=58.37 Aligned_cols=207 Identities=6% Similarity=-0.153 Sum_probs=114.8
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCC
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (501)
+.+++..++++|+.... .+.+.++|+.+++-...-..+.. ..... .-+.++..++++|+..- ...+
T Consensus 87 ~~i~~~~~g~lyv~~~~-----~~~v~~iD~~t~~~~~~i~~g~~----~~~~~-~p~~i~~~~~~lyv~~~----~~~~ 152 (328)
T 3dsm_A 87 RYIHFLSDEKAYVTQIW-----DYRIFIINPKTYEITGYIECPDM----DMESG-STEQMVQYGKYVYVNCW----SYQN 152 (328)
T ss_dssp EEEEEEETTEEEEEEBS-----CSEEEEEETTTTEEEEEEECTTC----CTTTC-BCCCEEEETTEEEEEEC----TTCC
T ss_pred cEEEEeCCCeEEEEECC-----CCeEEEEECCCCeEEEEEEcCCc----cccCC-CcceEEEECCEEEEEcC----CCCC
Confidence 34444344689988742 35699999998875432221110 00000 11233447889999842 1235
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCc-----ccccEEEEECCCCceEEcccCCCCCCC
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK-----WLSDVYVLDTISLEWMQLPVTGSVPPP 177 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~-----~~~~~~~yd~~t~~W~~~~~~~~~p~~ 177 (501)
.+.++|+.+++....-..+.. -+.++...++++|+........ ..+.++++|+.+.+....- ..+..
T Consensus 153 ~v~viD~~t~~~~~~i~~g~~-----p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~---~~~~g 224 (328)
T 3dsm_A 153 RILKIDTETDKVVDELTIGIQ-----PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQF---KFKLG 224 (328)
T ss_dssp EEEEEETTTTEEEEEEECSSC-----BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEE---ECCTT
T ss_pred EEEEEECCCCeEEEEEEcCCC-----ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEE---ecCCC
Confidence 799999999887654332222 2344455667888875322111 1367999999998866432 22222
Q ss_pred CcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCC-CceeeEEEE--eCCEEEEEcC
Q 010770 178 RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS-SRCGHTITS--GGHYLLLFGG 252 (501)
Q Consensus 178 r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~-~r~~~s~~~--~~~~i~v~GG 252 (501)
..-..++.. ++.+|+..+ .++++|+.+.+..... ..+. ...-.++++ .++.+|+...
T Consensus 225 ~~p~~la~~~d~~~lyv~~~---------------~v~~~d~~t~~~~~~~---~~~~~~~~p~gi~vdp~~g~lyva~~ 286 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINN---------------DIWRMPVEADRVPVRP---FLEFRDTKYYGLTVNPNNGEVYVADA 286 (328)
T ss_dssp CCCEEEEECTTSCEEEEESS---------------SEEEEETTCSSCCSSC---SBCCCSSCEEEEEECTTTCCEEEEEC
T ss_pred CCceeEEEecCCCEEEEEcc---------------EEEEEECCCCceeeee---eecCCCCceEEEEEcCCCCeEEEEcc
Confidence 233445554 567888643 2445688777653211 1111 233344555 4678999863
Q ss_pred CCCCCCCcccccccCeEEEEEcCCC
Q 010770 253 HGTGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
.+. ...+.|.+||++..
T Consensus 287 ~~y--------~~~~~V~v~d~~g~ 303 (328)
T 3dsm_A 287 IDY--------QQQGIVYRYSPQGK 303 (328)
T ss_dssp TTS--------SSEEEEEEECTTCC
T ss_pred ccc--------ccCCEEEEECCCCC
Confidence 211 02367999998843
No 22
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.42 E-value=0.03 Score=52.32 Aligned_cols=187 Identities=12% Similarity=-0.025 Sum_probs=112.2
Q ss_pred eEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEE
Q 010770 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 159 (501)
......++.+|+..|..+. +.+.++|+.+++-..-.+ ++..-++.+.+..+ ++||+.... .+.+++||
T Consensus 46 qGL~~~~~~LyestG~~g~---S~v~~vD~~Tgkv~~~~~---l~~~~FgeGit~~g-~~ly~ltw~-----~~~v~v~D 113 (262)
T 3nol_A 46 EGFFYRNGYFYESTGLNGR---SSIRKVDIESGKTLQQIE---LGKRYFGEGISDWK-DKIVGLTWK-----NGLGFVWN 113 (262)
T ss_dssp EEEEEETTEEEEEEEETTE---EEEEEECTTTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEESS-----SSEEEEEE
T ss_pred ceEEEECCEEEEECCCCCC---ceEEEEECCCCcEEEEEe---cCCccceeEEEEeC-CEEEEEEee-----CCEEEEEE
Confidence 4455568899999886542 468899999998655443 44433444455554 499998653 35699999
Q ss_pred CCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-eecCC-CCCCCcee
Q 010770 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPG-QAPSSRCG 237 (501)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~-~~~~g-~~p~~r~~ 237 (501)
+.|.+-..- .+.+-.+.+++..+++||+.-|. +.+..+|+.+.+-.. +.... ..|.....
T Consensus 114 ~~t~~~~~t-----i~~~~eG~glt~dg~~L~~SdGs-------------~~i~~iDp~T~~v~~~I~V~~~g~~~~~lN 175 (262)
T 3nol_A 114 IRNLRQVRS-----FNYDGEGWGLTHNDQYLIMSDGT-------------PVLRFLDPESLTPVRTITVTAHGEELPELN 175 (262)
T ss_dssp TTTCCEEEE-----EECSSCCCCEEECSSCEEECCSS-------------SEEEEECTTTCSEEEEEECEETTEECCCEE
T ss_pred CccCcEEEE-----EECCCCceEEecCCCEEEEECCC-------------CeEEEEcCCCCeEEEEEEeccCCccccccc
Confidence 998775432 22233666777667788886542 345566998876543 33210 11211111
Q ss_pred eEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCC--------CCCcccceEEEEE--CCEEEEE
Q 010770 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNE--------PPPARAYHSMTCL--GSLYLLF 307 (501)
Q Consensus 238 ~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~--------~p~~r~~~~~~~~--~~~iyv~ 307 (501)
-+...+++||+--- ..++|.+.|+.+.+-...-.... .+..-.-.+++.. ++.+||.
T Consensus 176 -ELe~~~G~lyan~w------------~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVT 242 (262)
T 3nol_A 176 -ELEWVDGEIFANVW------------QTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVT 242 (262)
T ss_dssp -EEEEETTEEEEEET------------TSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEE
T ss_pred -eeEEECCEEEEEEc------------cCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEE
Confidence 23445888886331 34789999999987544322211 1111233556655 4789998
Q ss_pred cc
Q 010770 308 GG 309 (501)
Q Consensus 308 GG 309 (501)
|-
T Consensus 243 GK 244 (262)
T 3nol_A 243 GK 244 (262)
T ss_dssp ET
T ss_pred CC
Confidence 84
No 23
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.035 Score=60.72 Aligned_cols=215 Identities=8% Similarity=0.008 Sum_probs=121.2
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCC
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 125 (501)
-+++||+.++++...... ..+. ..-.+.+.. ++.||+-.. .-+++||+.+++|.........+.
T Consensus 428 Gl~~~~~~~~~~~~~~~~-------~~~~-~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~ 492 (781)
T 3v9f_A 428 NISYYNTRLKKFQIIELE-------KNEL-LDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQL 492 (781)
T ss_dssp EEEEECSSSCEEEECCST-------TTCC-CCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSC
T ss_pred CEEEEcCCCCcEEEeccC-------CCCC-CeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCccccc
Confidence 488999999988876421 0111 122333333 467777421 358999999998887753211111
Q ss_pred -cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEE-eCCEEEEEcccCCCCCcc
Q 010770 126 -PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM-VEKRLLIYGGRGGGGPIM 203 (501)
Q Consensus 126 -~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~ 203 (501)
.....+++...++.|++-. . ...+++||+.+.+++.......++.... .+++. .++.|++...
T Consensus 493 ~~~~i~~i~~d~~g~lWigt-~-----~~Gl~~~~~~~~~~~~~~~~~~l~~~~i-~~i~~d~~g~lWi~T~-------- 557 (781)
T 3v9f_A 493 LENFVRSIAQDSEGRFWIGT-F-----GGGVGIYTPDMQLVRKFNQYEGFCSNTI-NQIYRSSKGQMWLATG-------- 557 (781)
T ss_dssp SCSCEEEEEECTTCCEEEEE-S-----SSCEEEECTTCCEEEEECTTTTCSCSCE-EEEEECTTSCEEEEET--------
T ss_pred ccceeEEEEEcCCCCEEEEE-c-----CCCEEEEeCCCCeEEEccCCCCCCCCee-EEEEECCCCCEEEEEC--------
Confidence 1112233334556777743 1 1348999999999988763222322211 12222 2567777432
Q ss_pred ccccccccc-ccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 204 GDLWALKGL-IEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 204 ~d~~~l~~~-~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
..+ .+||+.+++++.......+|.... .+++. .++.|++.+. +.+.+||+.+.++..
T Consensus 558 ------~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t~--------------~Gl~~~~~~~~~~~~ 616 (781)
T 3v9f_A 558 ------EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWASTN--------------TGISCYITSKKCFYT 616 (781)
T ss_dssp ------TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEECS--------------SCEEEEETTTTEEEE
T ss_pred ------CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEcC--------------CceEEEECCCCceEE
Confidence 223 677999988887764333444433 34443 4567877542 348899999999888
Q ss_pred cccCCCCCCcccce-EEEEECCEEEEEccCCC
Q 010770 282 LPIGNEPPPARAYH-SMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 282 v~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~ 312 (501)
.......+...+.. +++...+..+.|||.+|
T Consensus 617 ~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 648 (781)
T 3v9f_A 617 YDHSNNIPQGSFISGCVTKDHNGLIYFGSING 648 (781)
T ss_dssp ECGGGTCCSSCEEEEEEEECTTSCEEEEETTE
T ss_pred ecccCCccccccccCceEECCCCEEEEECCCc
Confidence 76543344444433 33333344455677665
No 24
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=97.11 E-value=0.19 Score=47.47 Aligned_cols=225 Identities=8% Similarity=0.019 Sum_probs=110.5
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++..++.|+.++ .+.++|..++.....-.. ....-.+++.. ++.+++.|+.+ ..+.+|
T Consensus 33 ~~~~~l~s~~~dg-----~i~iw~~~~~~~~~~~~~----------h~~~v~~~~~~~~~~~l~s~~~d-----~~i~vw 92 (312)
T 4ery_A 33 PNGEWLASSSADK-----LIKIWGAYDGKFEKTISG----------HKLGISDVAWSSDSNLLVSASDD-----KTLKIW 92 (312)
T ss_dssp TTSSEEEEEETTS-----CEEEEETTTCCEEEEECC----------CSSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred CCCCEEEEeeCCC-----eEEEEeCCCcccchhhcc----------CCCceEEEEEcCCCCEEEEECCC-----CEEEEE
Confidence 4456667776543 477889888776553211 11111222222 55677777654 358889
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
|..+.+-...-. .. ...-.+++...++.+++.|+.++ .+.+||+.+.+-...- +........+.+
T Consensus 93 d~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~~~~-----~~~~~~v~~~~~~ 158 (312)
T 4ery_A 93 DVSSGKCLKTLK---GH-SNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDVKTGKCLKTL-----PAHSDPVSAVHFN 158 (312)
T ss_dssp ETTTCCEEEEEE---CC-SSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTCCEEEEE-----CCCSSCEEEEEEC
T ss_pred ECCCCcEEEEEc---CC-CCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCEEEEEe-----cCCCCcEEEEEEc
Confidence 998876433221 11 11112333334557777787654 3888998877643321 111111122222
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIY 265 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~ 265 (501)
++.+++.|+.. ..+..||+.+.+....-.. .........+...++..++.|+.+
T Consensus 159 ~~~~~l~~~~~d------------~~i~~wd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~d----------- 213 (312)
T 4ery_A 159 RDGSLIVSSSYD------------GLCRIWDTASGQCLKTLID--DDNPPVSFVKFSPNGKYILAATLD----------- 213 (312)
T ss_dssp TTSSEEEEEETT------------SCEEEEETTTCCEEEEECC--SSCCCEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCCEEEEEeCC------------CcEEEEECCCCceeeEEec--cCCCceEEEEECCCCCEEEEEcCC-----------
Confidence 45667777653 2345667776654332211 111111111222345556666543
Q ss_pred cCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCC
Q 010770 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (501)
Q Consensus 266 ~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 313 (501)
+.+.+||+.+..-...-.................++.+++.|+.++.
T Consensus 214 -~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~ 260 (312)
T 4ery_A 214 -NTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL 260 (312)
T ss_dssp -TEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC
T ss_pred -CeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE
Confidence 46889998876533322211111111111222235777888876654
No 25
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.09 E-value=0.25 Score=48.34 Aligned_cols=209 Identities=16% Similarity=0.151 Sum_probs=112.2
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCc
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~ 103 (501)
..+.++.||+... ...+++||..++ .|..-.. .. ...+.+..++.||+..+ ...
T Consensus 99 ~~~~~~~v~v~~~------~g~l~a~d~~tG~~~W~~~~~-----------~~-~~~~p~~~~~~v~v~~~------~g~ 154 (376)
T 3q7m_A 99 VTVSGGHVYIGSE------KAQVYALNTSDGTVAWQTKVA-----------GE-ALSRPVVSDGLVLIHTS------NGQ 154 (376)
T ss_dssp EEEETTEEEEEET------TSEEEEEETTTCCEEEEEECS-----------SC-CCSCCEEETTEEEEECT------TSE
T ss_pred ceEeCCEEEEEcC------CCEEEEEECCCCCEEEEEeCC-----------Cc-eEcCCEEECCEEEEEcC------CCe
Confidence 3344478888543 146999999877 4755321 11 11223455788887542 236
Q ss_pred EEEEECCCCe--EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEcccCCCCCCCC-
Q 010770 104 FWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPPR- 178 (501)
Q Consensus 104 ~~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~p~~r- 178 (501)
++.||+.+++ |..-.... ....+...+.+.. ++.+|+ |.. ...++.||+.+.+ |+.-. ..|...
T Consensus 155 l~~~d~~tG~~~W~~~~~~~-~~~~~~~~~~~~~-~~~v~~-g~~-----~g~l~~~d~~tG~~~w~~~~---~~~~~~~ 223 (376)
T 3q7m_A 155 LQALNEADGAVKWTVNLDMP-SLSLRGESAPTTA-FGAAVV-GGD-----NGRVSAVLMEQGQMIWQQRI---SQATGST 223 (376)
T ss_dssp EEEEETTTCCEEEEEECCC------CCCCCCEEE-TTEEEE-CCT-----TTEEEEEETTTCCEEEEEEC---CC-----
T ss_pred EEEEECCCCcEEEEEeCCCC-ceeecCCCCcEEE-CCEEEE-EcC-----CCEEEEEECCCCcEEEEEec---ccCCCCc
Confidence 9999998775 77654210 1011111223333 557766 322 2358999987665 76543 111111
Q ss_pred -------cceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCC--ceEEeecCCCCCCCceeeEEEEeCCEEEE
Q 010770 179 -------CGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLL 249 (501)
Q Consensus 179 -------~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~--~W~~~~~~g~~p~~r~~~s~~~~~~~i~v 249 (501)
.....+..++.+|+.+.. ..+..+|+.+. .|+.-. +. ..+.+..++.+|+
T Consensus 224 ~~~~~~~~~~~p~~~~~~v~~~~~~-------------g~l~~~d~~tG~~~w~~~~-----~~---~~~~~~~~~~l~~ 282 (376)
T 3q7m_A 224 EIDRLSDVDTTPVVVNGVVFALAYN-------------GNLTALDLRSGQIMWKREL-----GS---VNDFIVDGNRIYL 282 (376)
T ss_dssp ------CCCCCCEEETTEEEEECTT-------------SCEEEEETTTCCEEEEECC-----CC---EEEEEEETTEEEE
T ss_pred ccccccccCCCcEEECCEEEEEecC-------------cEEEEEECCCCcEEeeccC-----CC---CCCceEECCEEEE
Confidence 223334567888886421 23445577665 465432 11 2345567888888
Q ss_pred EcCCCCCCCCcccccccCeEEEEEcCCCc--eEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 250 FGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
.... ..++.||+.+.+ |+.-... .+...+.+..++.||+..
T Consensus 283 ~~~~-------------g~l~~~d~~tG~~~w~~~~~~-----~~~~~~~~~~~~~l~v~~ 325 (376)
T 3q7m_A 283 VDQN-------------DRVMALTIDGGVTLWTQSDLL-----HRLLTSPVLYNGNLVVGD 325 (376)
T ss_dssp EETT-------------CCEEEEETTTCCEEEEECTTT-----TSCCCCCEEETTEEEEEC
T ss_pred EcCC-------------CeEEEEECCCCcEEEeecccC-----CCcccCCEEECCEEEEEe
Confidence 6531 358999987765 6653111 223334455678887764
No 26
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.08 E-value=0.023 Score=52.59 Aligned_cols=140 Identities=17% Similarity=0.071 Sum_probs=93.0
Q ss_pred EEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCccccccccc
Q 010770 131 AASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALK 210 (501)
Q Consensus 131 ~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~ 210 (501)
+.... ++.+|+-.|..+ .+.+..+|+.|++=..-. +++...++.+++..+++||+..... +
T Consensus 25 GL~~~-~~~LyestG~~g---~S~v~~vD~~tgkv~~~~---~l~~~~fgeGi~~~~~~ly~ltw~~------------~ 85 (243)
T 3mbr_X 25 GLFYL-RGHLYESTGETG---RSSVRKVDLETGRILQRA---EVPPPYFGAGIVAWRDRLIQLTWRN------------H 85 (243)
T ss_dssp EEEEE-TTEEEEEECCTT---SCEEEEEETTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESSS------------S
T ss_pred cEEEE-CCEEEEECCCCC---CceEEEEECCCCCEEEEE---eCCCCcceeEEEEeCCEEEEEEeeC------------C
Confidence 44444 569999988654 356899999999876654 5666677888888999999986432 5
Q ss_pred ccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceE-EcccCCCCC
Q 010770 211 GLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK-RLPIGNEPP 289 (501)
Q Consensus 211 ~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~v~~~~~~p 289 (501)
.+.+||+.+.+-..- .+.+..+.+++..++++|+.-| + +.++++|+.+.+-. .+..... +
T Consensus 86 ~v~v~D~~tl~~~~t-----i~~~~~Gwglt~dg~~L~vSdg-s------------~~l~~iDp~t~~~~~~I~V~~~-g 146 (243)
T 3mbr_X 86 EGFVYDLATLTPRAR-----FRYPGEGWALTSDDSHLYMSDG-T------------AVIRKLDPDTLQQVGSIKVTAG-G 146 (243)
T ss_dssp EEEEEETTTTEEEEE-----EECSSCCCEEEECSSCEEEECS-S------------SEEEEECTTTCCEEEEEECEET-T
T ss_pred EEEEEECCcCcEEEE-----EeCCCCceEEeeCCCEEEEECC-C------------CeEEEEeCCCCeEEEEEEEccC-C
Confidence 577889887654322 2233456788877888999765 2 57999999987643 2332111 1
Q ss_pred Cc-ccceEEEEECCEEEEEc
Q 010770 290 PA-RAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 290 ~~-r~~~~~~~~~~~iyv~G 308 (501)
.+ +.-..+..++++||+--
T Consensus 147 ~~~~~lNeLe~~~G~lyanv 166 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELLANV 166 (243)
T ss_dssp EECCCEEEEEEETTEEEEEE
T ss_pred cccccceeeEEeCCEEEEEE
Confidence 12 22234556688888543
No 27
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.06 E-value=0.044 Score=51.26 Aligned_cols=184 Identities=9% Similarity=-0.030 Sum_probs=108.0
Q ss_pred eEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEE
Q 010770 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 159 (501)
......++.||+..|..+. +.++|+++++-..-. ++..-++.+.+.. +++||+.... .+.+++||
T Consensus 58 qGL~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~-g~~Ly~ltw~-----~~~v~V~D 122 (268)
T 3nok_A 58 QGLVFHQGHFFESTGHQGT-----LRQLSLESAQPVWME----RLGNIFAEGLASD-GERLYQLTWT-----EGLLFTWS 122 (268)
T ss_dssp EEEEEETTEEEEEETTTTE-----EEECCSSCSSCSEEE----ECTTCCEEEEEEC-SSCEEEEESS-----SCEEEEEE
T ss_pred ceEEEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE----CCCCcceeEEEEe-CCEEEEEEcc-----CCEEEEEE
Confidence 5566678999999886543 889999988643322 2222233344444 4599998653 35699999
Q ss_pred CCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-eecCCCCCCCc-ee
Q 010770 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQAPSSR-CG 237 (501)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~-~~~~g~~p~~r-~~ 237 (501)
+.|.+-..- .+.+-.+.+++..+++||+.-|. +.+..+|+.+.+-.. +... ..+.+. .-
T Consensus 123 ~~Tl~~~~t-----i~~~~eGwGLt~Dg~~L~vSdGs-------------~~l~~iDp~T~~v~~~I~V~-~~g~~v~~l 183 (268)
T 3nok_A 123 GMPPQRERT-----TRYSGEGWGLCYWNGKLVRSDGG-------------TMLTFHEPDGFALVGAVQVK-LRGQPVELI 183 (268)
T ss_dssp TTTTEEEEE-----EECSSCCCCEEEETTEEEEECSS-------------SEEEEECTTTCCEEEEEECE-ETTEECCCE
T ss_pred CCcCcEEEE-----EeCCCceeEEecCCCEEEEECCC-------------CEEEEEcCCCCeEEEEEEeC-CCCcccccc
Confidence 998775532 22233467777778899998652 445666998876543 3221 111111 11
Q ss_pred eEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCC---------CCCCcccceEEEEE--CCEEEE
Q 010770 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGN---------EPPPARAYHSMTCL--GSLYLL 306 (501)
Q Consensus 238 ~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~---------~~p~~r~~~~~~~~--~~~iyv 306 (501)
--+...+++||+--- ..++|.+.|+.+.+-...-... ..+..-.-.+++.. ++++||
T Consensus 184 NeLe~~dG~lyanvw------------~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfV 251 (268)
T 3nok_A 184 NELECANGVIYANIW------------HSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFM 251 (268)
T ss_dssp EEEEEETTEEEEEET------------TCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEE
T ss_pred cccEEeCCEEEEEEC------------CCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEE
Confidence 123445888886221 2478999999998644322211 01111233455555 478888
Q ss_pred Ecc
Q 010770 307 FGG 309 (501)
Q Consensus 307 ~GG 309 (501)
.|-
T Consensus 252 TGK 254 (268)
T 3nok_A 252 TGK 254 (268)
T ss_dssp EET
T ss_pred eCC
Confidence 873
No 28
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.02 E-value=0.046 Score=59.91 Aligned_cols=213 Identities=8% Similarity=0.043 Sum_probs=117.3
Q ss_pred eEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCC---CC
Q 010770 48 VVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFG---DL 123 (501)
Q Consensus 48 v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~ 123 (501)
+++||+.++++........ ..+... -.+.+.. ++.|++-.. +-+++||+.+++|....... .+
T Consensus 429 l~~~d~~~~~~~~~~~~~~-----~l~~~~-v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~ 495 (795)
T 4a2l_A 429 LSILHRNSGQVENFNQRNS-----QLVNEN-VYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPV 495 (795)
T ss_dssp EEEEETTTCCEEEECTTTS-----CCSCSC-EEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBC
T ss_pred eeEEeCCCCcEEEeecCCC-----CcCCCe-eEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEcccccccccc
Confidence 8899999998877653210 112211 2223333 467777532 34899999999998875421 11
Q ss_pred CCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccC---CCCCCCCcceeEEEe-CCEEEEEcccCCC
Q 010770 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVT---GSVPPPRCGHTATMV-EKRLLIYGGRGGG 199 (501)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~p~~r~~~~~~~~-~~~lyv~GG~~~~ 199 (501)
+. ....+.+...++.|++... ..+++||+.+.++ ..... ..++.. .-.+++.. ++.|++-..
T Consensus 496 ~~-~~i~~i~~d~~g~lWigt~-------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigT~---- 561 (795)
T 4a2l_A 496 VS-KQITTLFRDSHKRLWIGGE-------EGLSVFKQEGLDI-QKASILPVSNVTKL-FTNCIYEASNGIIWVGTR---- 561 (795)
T ss_dssp CC-CCEEEEEECTTCCEEEEES-------SCEEEEEEETTEE-EECCCSCSCGGGGS-CEEEEEECTTSCEEEEES----
T ss_pred CC-ceEEEEEECCCCCEEEEeC-------CceEEEeCCCCeE-EEecCCCCCCCCCC-eeEEEEECCCCCEEEEeC----
Confidence 11 1112333335567877532 3499999999888 44311 011111 11122222 567777432
Q ss_pred CCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 200 GPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 200 ~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
..+.+||+.+++++.......+|.... .+++. .++.|++.+. +.+.+||+.+.+
T Consensus 562 ----------~Gl~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lWi~t~--------------~Gl~~~~~~~~~ 616 (795)
T 4a2l_A 562 ----------EGFYCFNEKDKQIKRYNTTNGLPNNVV-YGILEDSFGRLWLSTN--------------RGISCFNPETEK 616 (795)
T ss_dssp ----------SCEEEEETTTTEEEEECGGGTCSCSCE-EEEEECTTSCEEEEET--------------TEEEEEETTTTE
T ss_pred ----------CCceeECCCCCcEEEeCCCCCCchhhe-EEEEECCCCCEEEEcC--------------CceEEEcCCCCc
Confidence 234577999988887653323444433 23333 3567877552 347899999999
Q ss_pred eEEcccCCCCCCcccce-EEEEECCEEEEEccCCC
Q 010770 279 WKRLPIGNEPPPARAYH-SMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 279 W~~v~~~~~~p~~r~~~-~~~~~~~~iyv~GG~~~ 312 (501)
+.........+...+.. +++...+.-+.|||.+|
T Consensus 617 ~~~~~~~dGl~~~~f~~~~~~~~~~G~l~~g~~~G 651 (795)
T 4a2l_A 617 FRNFTESDGLQSNQFNTASYCRTSVGQMYFGGING 651 (795)
T ss_dssp EEEECGGGTCSCSCEEEEEEEECTTSCEEEEETTE
T ss_pred EEEcCCcCCCccccCccCceeECCCCeEEEecCCc
Confidence 88776543334444432 33344444455677665
No 29
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.01 E-value=0.15 Score=49.85 Aligned_cols=206 Identities=11% Similarity=0.047 Sum_probs=108.9
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCc--EEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKL--WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~--W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
+.||+..+ ...++.||+.+++ |..-... +....+...+.+..++.||+ |.. ...+..+|
T Consensus 144 ~~v~v~~~------~g~l~~~d~~tG~~~W~~~~~~-------~~~~~~~~~~~~~~~~~v~~-g~~-----~g~l~~~d 204 (376)
T 3q7m_A 144 GLVLIHTS------NGQLQALNEADGAVKWTVNLDM-------PSLSLRGESAPTTAFGAAVV-GGD-----NGRVSAVL 204 (376)
T ss_dssp TEEEEECT------TSEEEEEETTTCCEEEEEECCC------------CCCCCCEEETTEEEE-CCT-----TTEEEEEE
T ss_pred CEEEEEcC------CCeEEEEECCCCcEEEEEeCCC-------CceeecCCCCcEEECCEEEE-EcC-----CCEEEEEE
Confidence 56666433 2369999998774 7764311 11111222334455777776 321 23689999
Q ss_pred CCCCe--EEEEecCCCCCCcC-------CccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEcccCCCCCCC
Q 010770 109 TDIWQ--WSELTSFGDLPSPR-------DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPP 177 (501)
Q Consensus 109 ~~t~~--W~~~~~~~~~p~~r-------~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~p~~ 177 (501)
+.+++ |+.-.. .|... ...+..++.++.+|+.+. ...++++|+.+.+ |+.-. +.
T Consensus 205 ~~tG~~~w~~~~~---~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~------~g~l~~~d~~tG~~~w~~~~-----~~- 269 (376)
T 3q7m_A 205 MEQGQMIWQQRIS---QATGSTEIDRLSDVDTTPVVVNGVVFALAY------NGNLTALDLRSGQIMWKREL-----GS- 269 (376)
T ss_dssp TTTCCEEEEEECC---C-----------CCCCCCEEETTEEEEECT------TSCEEEEETTTCCEEEEECC-----CC-
T ss_pred CCCCcEEEEEecc---cCCCCcccccccccCCCcEEECCEEEEEec------CcEEEEEECCCCcEEeeccC-----CC-
Confidence 87664 665432 11111 011222233558887642 2358999998764 66432 11
Q ss_pred CcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCC
Q 010770 178 RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGT 255 (501)
Q Consensus 178 r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~--W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~ 255 (501)
..+.+..++.+|+.... ..+..+|+.+.+ |+.-.. ..+...+.++.++.||+...
T Consensus 270 --~~~~~~~~~~l~~~~~~-------------g~l~~~d~~tG~~~w~~~~~-----~~~~~~~~~~~~~~l~v~~~--- 326 (376)
T 3q7m_A 270 --VNDFIVDGNRIYLVDQN-------------DRVMALTIDGGVTLWTQSDL-----LHRLLTSPVLYNGNLVVGDS--- 326 (376)
T ss_dssp --EEEEEEETTEEEEEETT-------------CCEEEEETTTCCEEEEECTT-----TTSCCCCCEEETTEEEEECT---
T ss_pred --CCCceEECCEEEEEcCC-------------CeEEEEECCCCcEEEeeccc-----CCCcccCCEEECCEEEEEeC---
Confidence 23455568899987531 234556777665 654321 11222234456788887542
Q ss_pred CCCCcccccccCeEEEEEcCCCc--eEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 256 GGWLSRYDIYYNDTIILDRLSAQ--WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~--W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
...+++||+.+.+ |+.-.. ........+..++.||+..
T Consensus 327 ----------~g~l~~~d~~tG~~~~~~~~~-----~~~~~~~~~~~~~~l~v~~ 366 (376)
T 3q7m_A 327 ----------EGYLHWINVEDGRFVAQQKVD-----SSGFQTEPVAADGKLLIQA 366 (376)
T ss_dssp ----------TSEEEEEETTTCCEEEEEECC-----TTCBCSCCEEETTEEEEEB
T ss_pred ----------CCeEEEEECCCCcEEEEEecC-----CCcceeCCEEECCEEEEEe
Confidence 1358999988775 543221 1222334455688888764
No 30
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.99 E-value=0.063 Score=52.64 Aligned_cols=187 Identities=12% Similarity=0.040 Sum_probs=103.8
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-C-CEEEEEccccCCCCCCcEEEEE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~~~~~~~~~yd 108 (501)
+.+|+.|+.+ ..+.++|+.+++-...-.. . ..-.+++.. + ..||+.|+.+ ..+.++|
T Consensus 2 ~~l~vs~~~d-----~~v~v~d~~~~~~~~~~~~---------~--~~~~~~~~s~dg~~l~~~~~~d-----~~i~v~d 60 (391)
T 1l0q_A 2 TFAYIANSES-----DNISVIDVTSNKVTATIPV---------G--SNPMGAVISPDGTKVYVANAHS-----NDVSIID 60 (391)
T ss_dssp EEEEEEETTT-----TEEEEEETTTTEEEEEEEC---------S--SSEEEEEECTTSSEEEEEEGGG-----TEEEEEE
T ss_pred CEEEEEcCCC-----CEEEEEECCCCeEEEEeec---------C--CCcceEEECCCCCEEEEECCCC-----CeEEEEE
Confidence 4677777643 3589999998865543221 1 112333333 3 3677777543 3689999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
+.+++...... .+. .-.+++...++ .||+.|..+ ..+.+||+.+++....... ...-..++..
T Consensus 61 ~~~~~~~~~~~---~~~--~v~~~~~spdg~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~~-----~~~~~~~~~s~ 125 (391)
T 1l0q_A 61 TATNNVIATVP---AGS--SPQGVAVSPDGKQVYVTNMAS-----STLSVIDTTSNTVAGTVKT-----GKSPLGLALSP 125 (391)
T ss_dssp TTTTEEEEEEE---CSS--SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEEC-----SSSEEEEEECT
T ss_pred CCCCeEEEEEE---CCC--CccceEECCCCCEEEEEECCC-----CEEEEEECCCCeEEEEEeC-----CCCcceEEECC
Confidence 99887655443 111 22344444444 566655432 4589999998876554311 1112333333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~ 263 (501)
++.+|+.++.. ..+..||+.+.+....-..+.. -..++. .+..+|+.++.+
T Consensus 126 dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~~~~-----~~~~~~~~dg~~l~~~~~~~--------- 179 (391)
T 1l0q_A 126 DGKKLYVTNNGD------------KTVSVINTVTKAVINTVSVGRS-----PKGIAVTPDGTKVYVANFDS--------- 179 (391)
T ss_dssp TSSEEEEEETTT------------TEEEEEETTTTEEEEEEECCSS-----EEEEEECTTSSEEEEEETTT---------
T ss_pred CCCEEEEEeCCC------------CEEEEEECCCCcEEEEEecCCC-----cceEEECCCCCEEEEEeCCC---------
Confidence 34677776432 3456778887766544322111 123333 344676766432
Q ss_pred cccCeEEEEEcCCCceEEc
Q 010770 264 IYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 264 ~~~~~v~~yd~~~~~W~~v 282 (501)
+.+.+||+.+......
T Consensus 180 ---~~v~~~d~~~~~~~~~ 195 (391)
T 1l0q_A 180 ---MSISVIDTVTNSVIDT 195 (391)
T ss_dssp ---TEEEEEETTTTEEEEE
T ss_pred ---CEEEEEECCCCeEEEE
Confidence 4689999988765443
No 31
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.86 E-value=0.089 Score=52.11 Aligned_cols=209 Identities=16% Similarity=0.065 Sum_probs=102.0
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeE--EEEecCCCCC
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTSFGDLP 124 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W--~~~~~~~~~p 124 (501)
.+.+||+.+++....-. .....-.++..++.+++.|+.+ ..+.++|+.+..- ..+..
T Consensus 157 ~i~iwd~~~~~~~~~~~-----------~~~~~v~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~~----- 215 (401)
T 4aez_A 157 LVDIYDVESQTKLRTMA-----------GHQARVGCLSWNRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQG----- 215 (401)
T ss_dssp CEEEEETTTCCEEEEEC-----------CCSSCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEEC-----
T ss_pred eEEEEECcCCeEEEEec-----------CCCCceEEEEECCCEEEEEcCC-----CCEEEEecccCcceeeEEcC-----
Confidence 57778887765433211 1111122333355667777644 3688889874322 22211
Q ss_pred CcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCc
Q 010770 125 SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPI 202 (501)
Q Consensus 125 ~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~ 202 (501)
....-.+++...++.+++.|+.++ .+.+||..+.+-...-. .. ...-.++... +..+++.||...+
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~~~~~--~~--~~~v~~~~~~p~~~~ll~~~~gs~d--- 283 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGNDN-----VVQIWDARSSIPKFTKT--NH--NAAVKAVAWCPWQSNLLATGGGTMD--- 283 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTCSSEEEEEC--CC--SSCCCEEEECTTSTTEEEEECCTTT---
T ss_pred CCCCeeEEEEcCCCCEEEEEeCCC-----eEEEccCCCCCccEEec--CC--cceEEEEEECCCCCCEEEEecCCCC---
Confidence 111223334445667788887654 48899988765433211 11 1111233333 3467777652222
Q ss_pred ccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceE
Q 010770 203 MGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK 280 (501)
Q Consensus 203 ~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 280 (501)
..+..||..+..-...-. .... -.+++. .+..+++.+|... +.+.+||..+....
T Consensus 284 -------~~i~i~d~~~~~~~~~~~---~~~~--v~~~~~s~~~~~l~~~~g~~d-----------g~i~v~~~~~~~~~ 340 (401)
T 4aez_A 284 -------KQIHFWNAATGARVNTVD---AGSQ--VTSLIWSPHSKEIMSTHGFPD-----------NNLSIWSYSSSGLT 340 (401)
T ss_dssp -------CEEEEEETTTCCEEEEEE---CSSC--EEEEEECSSSSEEEEEECTTT-----------CEEEEEEEETTEEE
T ss_pred -------CEEEEEECCCCCEEEEEe---CCCc--EEEEEECCCCCeEEEEeecCC-----------CcEEEEecCCccce
Confidence 335567777665443321 1111 122232 3345555545432 46888998887666
Q ss_pred EcccCCCCCCcccceEEEEECCEEEEEccCCC
Q 010770 281 RLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 281 ~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 312 (501)
.+..... ...+....+..-++.+++.||.++
T Consensus 341 ~~~~~~~-h~~~v~~~~~s~dg~~l~s~~~dg 371 (401)
T 4aez_A 341 KQVDIPA-HDTRVLYSALSPDGRILSTAASDE 371 (401)
T ss_dssp EEEEEEC-CSSCCCEEEECTTSSEEEEECTTS
T ss_pred eEEEecC-CCCCEEEEEECCCCCEEEEEeCCC
Confidence 5533211 112222222233567777777665
No 32
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.83 E-value=0.32 Score=45.55 Aligned_cols=202 Identities=7% Similarity=-0.071 Sum_probs=114.7
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCC
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~ 102 (501)
|.+....++.+|+..|..+ .+.+.++|+.+++=..-.. .+........+..+++||+..- ..+
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~---------l~~~~fgeGi~~~g~~lyv~t~-----~~~ 86 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHK---------MDDSYFGEGLTLLNEKLYQVVW-----LKN 86 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEE---------CCTTCCEEEEEEETTEEEEEET-----TCS
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEe---------cCCCcceEEEEEeCCEEEEEEe-----cCC
Confidence 5555555589999877432 3679999999987554321 2333345567777889999853 335
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE-EcccCCCCCCCC-cc
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM-QLPVTGSVPPPR-CG 180 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~-~~~~~~~~p~~r-~~ 180 (501)
.+++||+.+.+=..--+.+ +|. +.+.+. ..+++|+.-| .+.++.+|+.+.+-. .+... ..+.+. .-
T Consensus 87 ~v~viD~~t~~v~~~i~~g-~~~---g~glt~-Dg~~l~vs~g------s~~l~viD~~t~~v~~~I~Vg-~~~~p~~~~ 154 (266)
T 2iwa_A 87 IGFIYDRRTLSNIKNFTHQ-MKD---GWGLAT-DGKILYGSDG------TSILYEIDPHTFKLIKKHNVK-YNGHRVIRL 154 (266)
T ss_dssp EEEEEETTTTEEEEEEECC-SSS---CCEEEE-CSSSEEEECS------SSEEEEECTTTCCEEEEEECE-ETTEECCCE
T ss_pred EEEEEECCCCcEEEEEECC-CCC---eEEEEE-CCCEEEEECC------CCeEEEEECCCCcEEEEEEEC-CCCcccccc
Confidence 7999999987543322212 122 233333 3447887643 467999999987643 33321 111121 11
Q ss_pred eeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEE-eecCCC--------CCCCceeeEEEE--eCCEEEE
Q 010770 181 HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-LKLPGQ--------APSSRCGHTITS--GGHYLLL 249 (501)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~-~~~~g~--------~p~~r~~~s~~~--~~~~i~v 249 (501)
..+...++++|+--.. -+.+.+.|+.+.+-.. +...+- .+..-.-.+.++ .++++||
T Consensus 155 nele~~dg~lyvn~~~------------~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 155 NELEYINGEVWANIWQ------------TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EEEEEETTEEEEEETT------------SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred eeEEEECCEEEEecCC------------CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 2333447888865321 1445556998876533 222110 111112234444 4568999
Q ss_pred EcCCCCCCCCcccccccCeEEEEEcCCC
Q 010770 250 FGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
.|+.. +.+++.++...
T Consensus 223 Tgk~~------------~~v~~i~l~~~ 238 (266)
T 2iwa_A 223 TGKLW------------PKLFEIKLHLV 238 (266)
T ss_dssp EETTC------------SEEEEEEEEEC
T ss_pred ECCCC------------CeEEEEEEecc
Confidence 88743 56777776543
No 33
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.83 E-value=0.33 Score=45.53 Aligned_cols=191 Identities=9% Similarity=-0.055 Sum_probs=108.5
Q ss_pred eEEEEeC-CEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEE
Q 010770 80 HIAVAID-CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVL 158 (501)
Q Consensus 80 h~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~y 158 (501)
+..+..+ +.+|+..|..+ .+.+.++|+.+++-..-.+ ++...+..+.+..+ ++||+.... .+.+++|
T Consensus 24 ~Gl~~~~dg~Lyvstg~~~---~s~v~~iD~~tg~v~~~i~---l~~~~fgeGi~~~g-~~lyv~t~~-----~~~v~vi 91 (266)
T 2iwa_A 24 QGLVYAENDTLFESTGLYG---RSSVRQVALQTGKVENIHK---MDDSYFGEGLTLLN-EKLYQVVWL-----KNIGFIY 91 (266)
T ss_dssp EEEEECSTTEEEEEECSTT---TCEEEEEETTTCCEEEEEE---CCTTCCEEEEEEET-TEEEEEETT-----CSEEEEE
T ss_pred ccEEEeCCCeEEEECCCCC---CCEEEEEECCCCCEEEEEe---cCCCcceEEEEEeC-CEEEEEEec-----CCEEEEE
Confidence 5666655 79999877422 3579999999998655433 33333334455554 499998642 3569999
Q ss_pred ECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceE-EeecCC-CCCCCce
Q 010770 159 DTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPG-QAPSSRC 236 (501)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~-~~~~~g-~~p~~r~ 236 (501)
|+.+.+=..--..+ + -.+..++..++++|+.-|. +.+..+|+.+.+-. .+.... ..|..+-
T Consensus 92 D~~t~~v~~~i~~g-~---~~g~glt~Dg~~l~vs~gs-------------~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ 154 (266)
T 2iwa_A 92 DRRTLSNIKNFTHQ-M---KDGWGLATDGKILYGSDGT-------------SILYEIDPHTFKLIKKHNVKYNGHRVIRL 154 (266)
T ss_dssp ETTTTEEEEEEECC-S---SSCCEEEECSSSEEEECSS-------------SEEEEECTTTCCEEEEEECEETTEECCCE
T ss_pred ECCCCcEEEEEECC-C---CCeEEEEECCCEEEEECCC-------------CeEEEEECCCCcEEEEEEECCCCcccccc
Confidence 99987543221111 1 2344555556789987541 34556698886643 333211 1122121
Q ss_pred eeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE---cccC------CCCCCcccceEEEEE--CCEEE
Q 010770 237 GHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR---LPIG------NEPPPARAYHSMTCL--GSLYL 305 (501)
Q Consensus 237 ~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~---v~~~------~~~p~~r~~~~~~~~--~~~iy 305 (501)
..+...++++|+--. ..++|.+.|+.+.+-.. ++.. ...+..-.-.+++.. ++++|
T Consensus 155 -nele~~dg~lyvn~~------------~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lf 221 (266)
T 2iwa_A 155 -NELEYINGEVWANIW------------QTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIF 221 (266)
T ss_dssp -EEEEEETTEEEEEET------------TSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEE
T ss_pred -eeEEEECCEEEEecC------------CCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEE
Confidence 233344788887432 24789999999876432 2210 000111123455555 46899
Q ss_pred EEccCCC
Q 010770 306 LFGGFDG 312 (501)
Q Consensus 306 v~GG~~~ 312 (501)
|.|+..+
T Consensus 222 VTgk~~~ 228 (266)
T 2iwa_A 222 VTGKLWP 228 (266)
T ss_dssp EEETTCS
T ss_pred EECCCCC
Confidence 9987554
No 34
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.71 E-value=0.16 Score=50.76 Aligned_cols=223 Identities=10% Similarity=0.035 Sum_probs=114.2
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 125 (501)
..++++|.....-..+... .......+..-+++.+++++..+. ...++++|+.+++...+.. .+
T Consensus 159 ~~i~i~d~~g~~~~~l~~~----------~~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~---~~- 222 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRS----------PQPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANGAVRQVAS---FP- 222 (415)
T ss_dssp EEEEEEETTSCSCEEEEEE----------SSCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTCCEEEEEC---CS-
T ss_pred ceEEEEcCCCCCCEEEeCC----------CCcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCCcEEEeec---CC-
Confidence 6789999886655544321 111222222235555566654332 2579999999998877653 11
Q ss_pred cCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcc
Q 010770 126 PRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (501)
Q Consensus 126 ~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (501)
....+.+...+++ |++.+..++ ...++.+|+.+.+...+. ..+. ....+... +++.+++++.....
T Consensus 223 -~~~~~~~~spdg~~la~~~~~~g---~~~i~~~d~~~~~~~~l~---~~~~--~~~~~~~spdg~~l~~~s~~~g~--- 290 (415)
T 2hqs_A 223 -RHNGAPAFSPDGSKLAFALSKTG---SLNLYVMDLASGQIRQVT---DGRS--NNTEPTWFPDSQNLAFTSDQAGR--- 290 (415)
T ss_dssp -SCEEEEEECTTSSEEEEEECTTS---SCEEEEEETTTCCEEECC---CCSS--CEEEEEECTTSSEEEEEECTTSS---
T ss_pred -CcccCEEEcCCCCEEEEEEecCC---CceEEEEECCCCCEEeCc---CCCC--cccceEECCCCCEEEEEECCCCC---
Confidence 1223344444554 554544332 246999999998877664 2111 11222222 45544444322111
Q ss_pred cccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEc
Q 010770 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 204 ~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
..++.+|+.+..-..+... .....+++. -+++.+++++.... ...++++|+.+.....+
T Consensus 291 ------~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~spdG~~l~~~~~~~g---------~~~i~~~d~~~~~~~~l 350 (415)
T 2hqs_A 291 ------PQVYKVNINGGAPQRITWE-----GSQNQDADVSSDGKFMVMVSSNGG---------QQHIAKQDLATGGVQVL 350 (415)
T ss_dssp ------CEEEEEETTSSCCEECCCS-----SSEEEEEEECTTSSEEEEEEECSS---------CEEEEEEETTTCCEEEC
T ss_pred ------cEEEEEECCCCCEEEEecC-----CCcccCeEECCCCCEEEEEECcCC---------ceEEEEEECCCCCEEEe
Confidence 2455668877765555421 112223333 34444445443221 24799999999888766
Q ss_pred ccCCCCCCcccceEEEEE-CCEEEEEccCCCCCccCcEEEecC
Q 010770 283 PIGNEPPPARAYHSMTCL-GSLYLLFGGFDGKSTFGDIWWLVP 324 (501)
Q Consensus 283 ~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~d~w~~~~ 324 (501)
... . ...+.+.. +++.+++++.++. ...+|.+++
T Consensus 351 ~~~-----~-~~~~~~~spdg~~l~~~s~~~~--~~~l~~~d~ 385 (415)
T 2hqs_A 351 SST-----F-LDETPSLAPNGTMVIYSSSQGM--GSVLNLVST 385 (415)
T ss_dssp CCS-----S-SCEEEEECTTSSEEEEEEEETT--EEEEEEEET
T ss_pred cCC-----C-CcCCeEEcCCCCEEEEEEcCCC--ccEEEEEEC
Confidence 542 1 22222222 4666666654332 235665554
No 35
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.70 E-value=0.37 Score=46.37 Aligned_cols=115 Identities=11% Similarity=0.017 Sum_probs=64.5
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCc
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~ 103 (501)
+....++.++++|+.+ ..+.+||+.++++..+..... ... .-.+++. -++.+++.|+.+ ..
T Consensus 14 ~~~s~~~~~l~~~~~d-----~~v~i~~~~~~~~~~~~~~~~-------h~~-~v~~~~~~~~~~~l~~~~~d-----g~ 75 (372)
T 1k8k_C 14 HAWNKDRTQIAICPNN-----HEVHIYEKSGNKWVQVHELKE-------HNG-QVTGVDWAPDSNRIVTCGTD-----RN 75 (372)
T ss_dssp EEECTTSSEEEEECSS-----SEEEEEEEETTEEEEEEEEEC-------CSS-CEEEEEEETTTTEEEEEETT-----SC
T ss_pred EEECCCCCEEEEEeCC-----CEEEEEeCCCCcEEeeeeecC-------CCC-cccEEEEeCCCCEEEEEcCC-----Ce
Confidence 3333456677777643 458899999987766554311 111 1222333 356667777643 35
Q ss_pred EEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 104 FWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 104 ~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+.+||..+.++...... ......-.+++...++..++.|+.++ .+.+||..+..
T Consensus 76 i~vwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~v~i~d~~~~~ 129 (372)
T 1k8k_C 76 AYVWTLKGRTWKPTLVI--LRINRAARCVRWAPNEKKFAVGSGSR-----VISICYFEQEN 129 (372)
T ss_dssp EEEEEEETTEEEEEEEC--CCCSSCEEEEEECTTSSEEEEEETTS-----SEEEEEEETTT
T ss_pred EEEEECCCCeeeeeEEe--ecCCCceeEEEECCCCCEEEEEeCCC-----EEEEEEecCCC
Confidence 88899988887665431 11122223334445667777777543 36666665543
No 36
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=96.67 E-value=0.28 Score=45.11 Aligned_cols=221 Identities=10% Similarity=-0.052 Sum_probs=109.9
Q ss_pred cEEEEECCcEEEE-EcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCC
Q 010770 23 HSAVNIGKSKVVV-FGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRR 100 (501)
Q Consensus 23 h~~~~~~~~~iyv-~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~ 100 (501)
++++...++.+|+ .... ...+.+||+.+......... .... -++++.. ++.||+...
T Consensus 27 ~~i~~~~~g~l~v~~~~~-----~~~i~~~~~~~~~~~~~~~~-------~~~~---p~~i~~~~~g~l~v~~~------ 85 (270)
T 1rwi_B 27 SGVAVDSAGNVYVTSEGM-----YGRVVKLATGSTGTTVLPFN-------GLYQ---PQGLAVDGAGTVYVTDF------ 85 (270)
T ss_dssp EEEEECTTCCEEEEECSS-----SCEEEEECC-----EECCCC-------SCCS---CCCEEECTTCCEEEEET------
T ss_pred cceEECCCCCEEEEccCC-----CCcEEEecCCCcccceEeeC-------CcCC---cceeEECCCCCEEEEcC------
Confidence 4444445577888 5332 24588898877655443211 0111 1233343 567888754
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcc
Q 010770 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (501)
Q Consensus 101 ~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (501)
...+.+||+.+.....+.. .....-.+++...++.+|+.... ...+++|+..+......... .. ..-
T Consensus 86 ~~~i~~~d~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p 152 (270)
T 1rwi_B 86 NNRVVTLAAGSNNQTVLPF----DGLNYPEGLAVDTQGAVYVADRG-----NNRVVKLAAGSKTQTVLPFT-GL---NDP 152 (270)
T ss_dssp TTEEEEECTTCSCCEECCC----CSCSSEEEEEECTTCCEEEEEGG-----GTEEEEECTTCCSCEECCCC-SC---CSC
T ss_pred CCEEEEEeCCCceEeeeec----CCcCCCcceEECCCCCEEEEECC-----CCEEEEEECCCceeEeeccc-cC---CCc
Confidence 2368899988776544321 11122234444456788887542 24588888766655433211 11 112
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe-CCEEEEEcCCCCCCC
Q 010770 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGW 258 (501)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~i~v~GG~~~~~~ 258 (501)
..++.. ++++|+..... ..+.+||+.+..-...... .. ..-.++++. ++.+|+.....
T Consensus 153 ~~i~~~~~g~l~v~~~~~------------~~i~~~~~~~~~~~~~~~~-~~---~~p~~i~~d~~g~l~v~~~~~---- 212 (270)
T 1rwi_B 153 DGVAVDNSGNVYVTDTDN------------NRVVKLEAESNNQVVLPFT-DI---TAPWGIAVDEAGTVYVTEHNT---- 212 (270)
T ss_dssp CCEEECTTCCEEEEEGGG------------TEEEEECTTTCCEEECCCS-SC---CSEEEEEECTTCCEEEEETTT----
T ss_pred eeEEEeCCCCEEEEECCC------------CEEEEEecCCCceEeeccc-CC---CCceEEEECCCCCEEEEECCC----
Confidence 334443 56788865321 3456778777654433211 11 122344443 45788765322
Q ss_pred CcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEcc
Q 010770 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (501)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG 309 (501)
+.+.+||+....-....... .....+++.. ++.+|+...
T Consensus 213 --------~~v~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 213 --------NQVVKLLAGSTTSTVLPFTG----LNTPLAVAVDSDRTVYVADR 252 (270)
T ss_dssp --------SCEEEECTTCSCCEECCCCS----CSCEEEEEECTTCCEEEEEG
T ss_pred --------CcEEEEcCCCCcceeeccCC----CCCceeEEECCCCCEEEEEC
Confidence 45899998776543322211 1122333333 467888754
No 37
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.63 E-value=0.31 Score=46.06 Aligned_cols=219 Identities=13% Similarity=0.025 Sum_probs=110.0
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++..++.|+.+ ..+.+||+.+.+........ ..... -.+++.. ++..++.|+.+ ..+.+|
T Consensus 107 ~~~~~l~~~~~d-----~~i~~~d~~~~~~~~~~~~~-------~~~~~-i~~~~~~~~~~~l~~~~~d-----g~v~~~ 168 (337)
T 1gxr_A 107 PDGCTLIVGGEA-----STLSIWDLAAPTPRIKAELT-------SSAPA-CYALAISPDSKVCFSCCSD-----GNIAVW 168 (337)
T ss_dssp TTSSEEEEEESS-----SEEEEEECCCC--EEEEEEE-------CSSSC-EEEEEECTTSSEEEEEETT-----SCEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCCcceeeecc-------cCCCc-eEEEEECCCCCEEEEEeCC-----CcEEEE
Confidence 345566666543 35889999888754433221 11111 1222222 55666677643 358899
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
|..+.+....-. . ......+++...++..++.|+.+ ..+.+||+.+.+-.... ..+.+ -.++...
T Consensus 169 d~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~---~~~~~--v~~~~~s~ 234 (337)
T 1gxr_A 169 DLHNQTLVRQFQ---G-HTDGASCIDISNDGTKLWTGGLD-----NTVRSWDLREGRQLQQH---DFTSQ--IFSLGYCP 234 (337)
T ss_dssp ETTTTEEEEEEC---C-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEEEEEE---ECSSC--EEEEEECT
T ss_pred eCCCCceeeeee---c-ccCceEEEEECCCCCEEEEEecC-----CcEEEEECCCCceEeee---cCCCc--eEEEEECC
Confidence 998886544331 1 11122333444456677777754 34889998877644332 11111 1223332
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIY 265 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~ 265 (501)
++..+++|+.. ..+..||..+..-..+. ... . .-.++.. .++.+++.|+.+
T Consensus 235 ~~~~l~~~~~~------------~~i~~~~~~~~~~~~~~---~~~-~-~v~~~~~~~~~~~l~~~~~d----------- 286 (337)
T 1gxr_A 235 TGEWLAVGMES------------SNVEVLHVNKPDKYQLH---LHE-S-CVLSLKFAYCGKWFVSTGKD----------- 286 (337)
T ss_dssp TSSEEEEEETT------------SCEEEEETTSSCEEEEC---CCS-S-CEEEEEECTTSSEEEEEETT-----------
T ss_pred CCCEEEEEcCC------------CcEEEEECCCCCeEEEc---CCc-c-ceeEEEECCCCCEEEEecCC-----------
Confidence 45666666543 23456677665543332 111 1 1122333 345566666543
Q ss_pred cCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 266 YNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 266 ~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
..+.+||+.+..-...... .....+++.. ++..++.|+.++.
T Consensus 287 -g~i~~~~~~~~~~~~~~~~-----~~~v~~~~~s~~~~~l~~~~~dg~ 329 (337)
T 1gxr_A 287 -NLLNAWRTPYGASIFQSKE-----SSSVLSCDISVDDKYIVTGSGDKK 329 (337)
T ss_dssp -SEEEEEETTTCCEEEEEEC-----SSCEEEEEECTTSCEEEEEETTSC
T ss_pred -CcEEEEECCCCeEEEEecC-----CCcEEEEEECCCCCEEEEecCCCe
Confidence 4688999887664432221 1112233332 4667777776553
No 38
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.60 E-value=0.037 Score=51.68 Aligned_cols=137 Identities=12% Similarity=0.003 Sum_probs=88.1
Q ss_pred EEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccc
Q 010770 134 AIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLI 213 (501)
Q Consensus 134 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~ 213 (501)
.+.++.+|+-.|..+ .+.+.++|+.|++=..-- +++...++.+++..+++||+..... +.+.
T Consensus 49 ~~~~~~LyestG~~g---~S~v~~vD~~Tgkv~~~~---~l~~~~FgeGit~~g~~ly~ltw~~------------~~v~ 110 (262)
T 3nol_A 49 FYRNGYFYESTGLNG---RSSIRKVDIESGKTLQQI---ELGKRYFGEGISDWKDKIVGLTWKN------------GLGF 110 (262)
T ss_dssp EEETTEEEEEEEETT---EEEEEEECTTTCCEEEEE---ECCTTCCEEEEEEETTEEEEEESSS------------SEEE
T ss_pred EEECCEEEEECCCCC---CceEEEEECCCCcEEEEE---ecCCccceeEEEEeCCEEEEEEeeC------------CEEE
Confidence 344679999988654 246889999999866544 4555566777888899999985432 5567
Q ss_pred cccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceE-EcccCCCCCCc-
Q 010770 214 EEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWK-RLPIGNEPPPA- 291 (501)
Q Consensus 214 ~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~-~v~~~~~~p~~- 291 (501)
+||+++.+-..- .+.+..+.+++..++.+|+.-| .+.++.+|+.+.+-. .+..... ..+
T Consensus 111 v~D~~t~~~~~t-----i~~~~eG~glt~dg~~L~~SdG-------------s~~i~~iDp~T~~v~~~I~V~~~-g~~~ 171 (262)
T 3nol_A 111 VWNIRNLRQVRS-----FNYDGEGWGLTHNDQYLIMSDG-------------TPVLRFLDPESLTPVRTITVTAH-GEEL 171 (262)
T ss_dssp EEETTTCCEEEE-----EECSSCCCCEEECSSCEEECCS-------------SSEEEEECTTTCSEEEEEECEET-TEEC
T ss_pred EEECccCcEEEE-----EECCCCceEEecCCCEEEEECC-------------CCeEEEEcCCCCeEEEEEEeccC-Cccc
Confidence 889987765422 1222356677777788888654 256999999986543 3333111 111
Q ss_pred ccceEEEEECCEEEEE
Q 010770 292 RAYHSMTCLGSLYLLF 307 (501)
Q Consensus 292 r~~~~~~~~~~~iyv~ 307 (501)
+.-..+...+++||+-
T Consensus 172 ~~lNELe~~~G~lyan 187 (262)
T 3nol_A 172 PELNELEWVDGEIFAN 187 (262)
T ss_dssp CCEEEEEEETTEEEEE
T ss_pred cccceeEEECCEEEEE
Confidence 1111344568888864
No 39
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.54 E-value=0.58 Score=44.70 Aligned_cols=218 Identities=11% Similarity=0.103 Sum_probs=106.2
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 111 (501)
.+++.|+.+ ..+.++|+.+++-...-.. .+. .....+..-++..++.|+.+ ..+.+||..+
T Consensus 93 ~~l~s~s~D-----~~i~lWd~~~~~~~~~~~~--------~~~-~~~~~~~spdg~~l~~g~~d-----g~v~i~~~~~ 153 (321)
T 3ow8_A 93 PIAASSSLD-----AHIRLWDLENGKQIKSIDA--------GPV-DAWTLAFSPDSQYLATGTHV-----GKVNIFGVES 153 (321)
T ss_dssp SEEEEEETT-----SEEEEEETTTTEEEEEEEC--------CTT-CCCCEEECTTSSEEEEECTT-----SEEEEEETTT
T ss_pred CEEEEEeCC-----CcEEEEECCCCCEEEEEeC--------CCc-cEEEEEECCCCCEEEEEcCC-----CcEEEEEcCC
Confidence 344555433 3577888887754332211 011 11122223355666776643 3578888877
Q ss_pred CeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEE
Q 010770 112 WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRL 190 (501)
Q Consensus 112 ~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~l 190 (501)
.+-..... .......+++...+++.++.|+.++ .+.+||+.+.+-...- .+ ...+ -.+++.. ++.+
T Consensus 154 ~~~~~~~~----~~~~~v~~~~~spdg~~lasg~~dg-----~i~iwd~~~~~~~~~~-~~-h~~~--v~~l~~spd~~~ 220 (321)
T 3ow8_A 154 GKKEYSLD----TRGKFILSIAYSPDGKYLASGAIDG-----IINIFDIATGKLLHTL-EG-HAMP--IRSLTFSPDSQL 220 (321)
T ss_dssp CSEEEEEE----CSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE-CC-CSSC--CCEEEECTTSCE
T ss_pred CceeEEec----CCCceEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCcEEEEE-cc-cCCc--eeEEEEcCCCCE
Confidence 65433221 1112223344446677888887654 4889999887644321 11 1111 1122232 5667
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeE
Q 010770 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (501)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (501)
++.|+.. ..+..||..+......- .+ .. ..-.+++. -++..++.|+.+ ..+
T Consensus 221 l~s~s~d------------g~i~iwd~~~~~~~~~~-~~--h~-~~v~~~~~sp~~~~l~s~s~D------------~~v 272 (321)
T 3ow8_A 221 LVTASDD------------GYIKIYDVQHANLAGTL-SG--HA-SWVLNVAFCPDDTHFVSSSSD------------KSV 272 (321)
T ss_dssp EEEECTT------------SCEEEEETTTCCEEEEE-CC--CS-SCEEEEEECTTSSEEEEEETT------------SCE
T ss_pred EEEEcCC------------CeEEEEECCCcceeEEE-cC--CC-CceEEEEECCCCCEEEEEeCC------------CcE
Confidence 7777653 23456677665543221 11 11 11112333 345566666643 357
Q ss_pred EEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 270 ~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
.+||+.+.+-...-... ...-.+++.. ++..++.||.++.
T Consensus 273 ~iwd~~~~~~~~~~~~h----~~~v~~v~~s~~g~~l~s~~~d~~ 313 (321)
T 3ow8_A 273 KVWDVGTRTCVHTFFDH----QDQVWGVKYNGNGSKIVSVGDDQE 313 (321)
T ss_dssp EEEETTTTEEEEEECCC----SSCEEEEEECTTSSEEEEEETTCC
T ss_pred EEEeCCCCEEEEEEcCC----CCcEEEEEECCCCCEEEEEeCCCe
Confidence 88898766432221111 1112233332 4567777776654
No 40
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=96.54 E-value=0.12 Score=50.69 Aligned_cols=186 Identities=11% Similarity=0.062 Sum_probs=99.9
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
..+|+.|+.+ ..+.++|+.+++....-.. +. .-.+++.. +..||+.|.. ...+.+||
T Consensus 44 ~~l~~~~~~d-----~~i~v~d~~~~~~~~~~~~---------~~--~v~~~~~spdg~~l~~~~~~-----~~~v~v~d 102 (391)
T 1l0q_A 44 TKVYVANAHS-----NDVSIIDTATNNVIATVPA---------GS--SPQGVAVSPDGKQVYVTNMA-----SSTLSVID 102 (391)
T ss_dssp SEEEEEEGGG-----TEEEEEETTTTEEEEEEEC---------SS--SEEEEEECTTSSEEEEEETT-----TTEEEEEE
T ss_pred CEEEEECCCC-----CeEEEEECCCCeEEEEEEC---------CC--CccceEECCCCCEEEEEECC-----CCEEEEEE
Confidence 3566766543 4689999988876553321 11 22333333 3456666542 24699999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
+.+++...... ......+++...++ .+|+.++.+ ..+++||+.+.+....-..+ ..-..++..
T Consensus 103 ~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~-----~~~~~~~~~~ 167 (391)
T 1l0q_A 103 TTSNTVAGTVK-----TGKSPLGLALSPDGKKLYVTNNGD-----KTVSVINTVTKAVINTVSVG-----RSPKGIAVTP 167 (391)
T ss_dssp TTTTEEEEEEE-----CSSSEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEECC-----SSEEEEEECT
T ss_pred CCCCeEEEEEe-----CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEecC-----CCcceEEECC
Confidence 99987655443 11222344444444 576776543 36899999988766543211 111233333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCC-EEEEEcCCCCCCCCcccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~-~i~v~GG~~~~~~~~~~~ 263 (501)
++.+|+.++.. ..+..||+.+.+...... ....-.+++. -++ .+++.+. ..
T Consensus 168 dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~-~~-------- 221 (391)
T 1l0q_A 168 DGTKVYVANFDS------------MSISVIDTVTNSVIDTVK-----VEAAPSGIAVNPEGTKAYVTNV-DK-------- 221 (391)
T ss_dssp TSSEEEEEETTT------------TEEEEEETTTTEEEEEEE-----CSSEEEEEEECTTSSEEEEEEE-CS--------
T ss_pred CCCEEEEEeCCC------------CEEEEEECCCCeEEEEEe-----cCCCccceEECCCCCEEEEEec-Cc--------
Confidence 34677766432 335677888776544331 1112223333 233 5555442 11
Q ss_pred cccCeEEEEEcCCCce
Q 010770 264 IYYNDTIILDRLSAQW 279 (501)
Q Consensus 264 ~~~~~v~~yd~~~~~W 279 (501)
....+.+||+.+..-
T Consensus 222 -~~~~v~~~d~~~~~~ 236 (391)
T 1l0q_A 222 -YFNTVSMIDTGTNKI 236 (391)
T ss_dssp -SCCEEEEEETTTTEE
T ss_pred -CCCcEEEEECCCCeE
Confidence 125789999987654
No 41
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.50 E-value=0.17 Score=55.27 Aligned_cols=224 Identities=12% Similarity=0.024 Sum_probs=119.2
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~ 106 (501)
..++.|+|-. .. .-+.+||+.++.+....... ..+. ..-++.+.. ++.|++ |.. ..-+++
T Consensus 371 d~~g~lWigt-~~-----~Gl~~~~~~~~~~~~~~~~~------~~~~-~~v~~i~~d~~g~lWi-gt~-----~~Gl~~ 431 (781)
T 3v9f_A 371 DGQGKLWIGT-DG-----GGINVFENGKRVAIYNKENR------ELLS-NSVLCSLKDSEGNLWF-GTY-----LGNISY 431 (781)
T ss_dssp CTTSCEEEEE-BS-----SCEEEEETTEEEEECC-----------CCC-SBEEEEEECTTSCEEE-EET-----TEEEEE
T ss_pred cCCCCEEEEe-CC-----CcEEEEECCCCeEEEccCCC------CCCC-cceEEEEECCCCCEEE-Eec-----cCCEEE
Confidence 3446677532 11 22889999887776652110 1111 122333333 567887 322 135889
Q ss_pred EECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCC--CCCCCCcceeEE
Q 010770 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG--SVPPPRCGHTAT 184 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~--~~p~~r~~~~~~ 184 (501)
||+.+++++..... .++ .....+.+...++.|++-.. ..+++||+.+.+|....... ..+... -.+++
T Consensus 432 ~~~~~~~~~~~~~~-~~~-~~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~-i~~i~ 501 (781)
T 3v9f_A 432 YNTRLKKFQIIELE-KNE-LLDVRVFYEDKNKKIWIGTH-------AGVFVIDLASKKVIHHYDTSNSQLLENF-VRSIA 501 (781)
T ss_dssp ECSSSCEEEECCST-TTC-CCCEEEEEECTTSEEEEEET-------TEEEEEESSSSSCCEEECTTTSSCSCSC-EEEEE
T ss_pred EcCCCCcEEEeccC-CCC-CCeEEEEEECCCCCEEEEEC-------CceEEEeCCCCeEEecccCcccccccce-eEEEE
Confidence 99999998887531 111 12223333344668877431 45999999999988775221 111111 11222
Q ss_pred Ee-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccc
Q 010770 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~ 263 (501)
.. ++.|+|-. . . ..+.+||+.+++++.......+|......-+...++.|++-..
T Consensus 502 ~d~~g~lWigt-~-~-----------~Gl~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~----------- 557 (781)
T 3v9f_A 502 QDSEGRFWIGT-F-G-----------GGVGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG----------- 557 (781)
T ss_dssp ECTTCCEEEEE-S-S-----------SCEEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-----------
T ss_pred EcCCCCEEEEE-c-C-----------CCEEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-----------
Confidence 22 56777743 1 1 2345679999988887643333333322222224567777432
Q ss_pred cccCeE-EEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 264 IYYNDT-IILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 264 ~~~~~v-~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
+.+ ++||+.+.++.........|.... .+++.. ++.|++.+
T Consensus 558 ---~Glv~~~d~~~~~~~~~~~~~gl~~~~i-~~i~~d~~g~lW~~t 600 (781)
T 3v9f_A 558 ---EGLVCFPSARNFDYQVFQRKEGLPNTHI-RAISEDKNGNIWAST 600 (781)
T ss_dssp ---TEEEEESCTTTCCCEEECGGGTCSCCCC-CEEEECSSSCEEEEC
T ss_pred ---CCceEEECCCCCcEEEccccCCCCCceE-EEEEECCCCCEEEEc
Confidence 236 889999888887755333333333 344433 46676654
No 42
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=96.50 E-value=0.17 Score=50.58 Aligned_cols=203 Identities=12% Similarity=0.077 Sum_probs=108.2
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CC-EEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~~~~~y 107 (501)
+++.+++++..++ ...++++|+.+++...+... + ....+.+.. ++ .|++.+...+ ...++.+
T Consensus 189 dg~~la~~s~~~~--~~~i~~~d~~tg~~~~l~~~---------~--~~~~~~~~spdg~~la~~~~~~g---~~~i~~~ 252 (415)
T 2hqs_A 189 DGSKLAYVTFESG--RSALVIQTLANGAVRQVASF---------P--RHNGAPAFSPDGSKLAFALSKTG---SLNLYVM 252 (415)
T ss_dssp TSSEEEEEECTTS--SCEEEEEETTTCCEEEEECC---------S--SCEEEEEECTTSSEEEEEECTTS---SCEEEEE
T ss_pred CCCEEEEEEecCC--CcEEEEEECCCCcEEEeecC---------C--CcccCEEEcCCCCEEEEEEecCC---CceEEEE
Confidence 4455555554322 25799999999887765421 1 112222222 44 4554544322 2469999
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
|+.+++...+.. . .....+.+...+++.+++++... ....++.+|+.+.+-..+... ......++..
T Consensus 253 d~~~~~~~~l~~---~--~~~~~~~~~spdg~~l~~~s~~~--g~~~i~~~d~~~~~~~~l~~~-----~~~~~~~~~sp 320 (415)
T 2hqs_A 253 DLASGQIRQVTD---G--RSNNTEPTWFPDSQNLAFTSDQA--GRPQVYKVNINGGAPQRITWE-----GSQNQDADVSS 320 (415)
T ss_dssp ETTTCCEEECCC---C--SSCEEEEEECTTSSEEEEEECTT--SSCEEEEEETTSSCCEECCCS-----SSEEEEEEECT
T ss_pred ECCCCCEEeCcC---C--CCcccceEECCCCCEEEEEECCC--CCcEEEEEECCCCCEEEEecC-----CCcccCeEECC
Confidence 999988766542 1 11222333445565555544321 134689999988876555311 1111222222
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIY 265 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~ 265 (501)
+++.+++++..... ..+..+|+.+.....+.. .. . ..+.+. -+++.+++++...+
T Consensus 321 dG~~l~~~~~~~g~---------~~i~~~d~~~~~~~~l~~---~~--~-~~~~~~spdg~~l~~~s~~~~--------- 376 (415)
T 2hqs_A 321 DGKFMVMVSSNGGQ---------QHIAKQDLATGGVQVLSS---TF--L-DETPSLAPNGTMVIYSSSQGM--------- 376 (415)
T ss_dssp TSSEEEEEEECSSC---------EEEEEEETTTCCEEECCC---SS--S-CEEEEECTTSSEEEEEEEETT---------
T ss_pred CCCEEEEEECcCCc---------eEEEEEECCCCCEEEecC---CC--C-cCCeEEcCCCCEEEEEEcCCC---------
Confidence 45544444432211 356677998888876652 11 1 222333 35555666653321
Q ss_pred cCeEEEEEcCCCceEEccc
Q 010770 266 YNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 266 ~~~v~~yd~~~~~W~~v~~ 284 (501)
...+|++|+.......+..
T Consensus 377 ~~~l~~~d~~g~~~~~l~~ 395 (415)
T 2hqs_A 377 GSVLNLVSTDGRFKARLPA 395 (415)
T ss_dssp EEEEEEEETTSCCEEECCC
T ss_pred ccEEEEEECCCCcEEEeeC
Confidence 2479999998887777655
No 43
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=96.48 E-value=0.55 Score=43.63 Aligned_cols=230 Identities=8% Similarity=0.020 Sum_probs=116.2
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE--eCCEEEEEccccCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRL 101 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~ 101 (501)
.+++..++.+|+.+.. ...+.+||+.......+...+. .......-+..++ -++.+|+.+... .
T Consensus 34 ~v~~~~~g~l~v~~~~-----~~~i~~~d~~g~~~~~~~~~~~-----~~~~~~~p~~i~~~~~~g~l~v~~~~~----~ 99 (286)
T 1q7f_A 34 GVAVNAQNDIIVADTN-----NHRIQIFDKEGRFKFQFGECGK-----RDSQLLYPNRVAVVRNSGDIIVTERSP----T 99 (286)
T ss_dssp EEEECTTCCEEEEEGG-----GTEEEEECTTSCEEEEECCBSS-----STTCBSSEEEEEEETTTTEEEEEECGG----G
T ss_pred eEEECCCCCEEEEECC-----CCEEEEECCCCcEEEEecccCC-----CcccccCceEEEEEcCCCeEEEEcCCC----C
Confidence 3444455678887543 2458899988544333322110 0001112233444 267899886321 2
Q ss_pred CcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
..+.+||.....-..+.. +....-+++++..++.+|+.... ...+++||+.......+...+.. ..-.
T Consensus 100 ~~i~~~d~~g~~~~~~~~----~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~~~~---~~p~ 167 (286)
T 1q7f_A 100 HQIQIYNQYGQFVRKFGA----TILQHPRGVTVDNKGRIIVVECK-----VMRVIIFDQNGNVLHKFGCSKHL---EFPN 167 (286)
T ss_dssp CEEEEECTTSCEEEEECT----TTCSCEEEEEECTTSCEEEEETT-----TTEEEEECTTSCEEEEEECTTTC---SSEE
T ss_pred CEEEEECCCCcEEEEecC----ccCCCceEEEEeCCCCEEEEECC-----CCEEEEEcCCCCEEEEeCCCCcc---CCcE
Confidence 468889965544433421 11122234445556788887543 24588999776554444321111 1112
Q ss_pred eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCC
Q 010770 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (501)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~ 259 (501)
.++.. ++++|+..... ..+.+||+.......+...+.. ..-.++++ .++.+|+....+.
T Consensus 168 ~i~~~~~g~l~v~~~~~------------~~i~~~~~~g~~~~~~~~~g~~---~~p~~i~~d~~G~l~v~~~~~~---- 228 (286)
T 1q7f_A 168 GVVVNDKQEIFISDNRA------------HCVKVFNYEGQYLRQIGGEGIT---NYPIGVGINSNGEILIADNHNN---- 228 (286)
T ss_dssp EEEECSSSEEEEEEGGG------------TEEEEEETTCCEEEEESCTTTS---CSEEEEEECTTCCEEEEECSSS----
T ss_pred EEEECCCCCEEEEECCC------------CEEEEEcCCCCEEEEEccCCcc---CCCcEEEECCCCCEEEEeCCCC----
Confidence 33333 57888875421 4466778766554444422211 11223444 4567888664321
Q ss_pred cccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
..|.+||+....-..+..... ....++++.. ++++|+..
T Consensus 229 -------~~i~~~~~~g~~~~~~~~~~~---~~~~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 229 -------FNLTIFTQDGQLISALESKVK---HAQCFDVALMDDGSVVLAS 268 (286)
T ss_dssp -------CEEEEECTTSCEEEEEEESSC---CSCEEEEEEETTTEEEEEE
T ss_pred -------EEEEEECCCCCEEEEEcccCC---CCcceeEEECCCCcEEEEC
Confidence 268999977655444443211 1112233333 57888874
No 44
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.44 E-value=0.62 Score=43.83 Aligned_cols=193 Identities=10% Similarity=0.102 Sum_probs=93.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEEC
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
++..++.|+.+ ..+.+||+.+++-...-.. ...........-++.+++.|+.++ .+.+||+
T Consensus 76 ~~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~~~d~-----~i~iwd~ 136 (312)
T 4ery_A 76 DSNLLVSASDD-----KTLKIWDVSSGKCLKTLKG---------HSNYVFCCNFNPQSNLIVSGSFDE-----SVRIWDV 136 (312)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTCCEEEEEEC---------CSSCEEEEEECSSSSEEEEEETTS-----CEEEEET
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEcC---------CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEEC
Confidence 34555555543 3577888877654332110 111111111222456677776543 5889999
Q ss_pred CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CC
Q 010770 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK 188 (501)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~ 188 (501)
.+.+-...-. . ....-.+++...++.+++.|+.++ .+..||+.+.+-...-.... ... -..+... ++
T Consensus 137 ~~~~~~~~~~---~-~~~~v~~~~~~~~~~~l~~~~~d~-----~i~~wd~~~~~~~~~~~~~~--~~~-~~~~~~~~~~ 204 (312)
T 4ery_A 137 KTGKCLKTLP---A-HSDPVSAVHFNRDGSLIVSSSYDG-----LCRIWDTASGQCLKTLIDDD--NPP-VSFVKFSPNG 204 (312)
T ss_dssp TTCCEEEEEC---C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEEEECCSS--CCC-EEEEEECTTS
T ss_pred CCCEEEEEec---C-CCCcEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCCceeeEEeccC--CCc-eEEEEECCCC
Confidence 8776433321 1 111112233335567778887654 48889988776543221101 111 1112222 45
Q ss_pred EEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCce-eeEEEEeCCEEEEEcCCCCCCCCcccccccC
Q 010770 189 RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRC-GHTITSGGHYLLLFGGHGTGGWLSRYDIYYN 267 (501)
Q Consensus 189 ~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~-~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~ 267 (501)
..++.|+.. ..+..||..+.+-...- .+....... .......++.+++.|+.+ .
T Consensus 205 ~~l~~~~~d------------~~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sg~~d------------g 259 (312)
T 4ery_A 205 KYILAATLD------------NTLKLWDYSKGKCLKTY-TGHKNEKYCIFANFSVTGGKWIVSGSED------------N 259 (312)
T ss_dssp SEEEEEETT------------TEEEEEETTTTEEEEEE-CSSCCSSSCCCEEEECSSSCEEEECCTT------------S
T ss_pred CEEEEEcCC------------CeEEEEECCCCcEEEEE-EecCCceEEEEEEEEeCCCcEEEEECCC------------C
Confidence 566666543 23456677665433222 111111111 112222456667777644 3
Q ss_pred eEEEEEcCCCc
Q 010770 268 DTIILDRLSAQ 278 (501)
Q Consensus 268 ~v~~yd~~~~~ 278 (501)
.+.+||+.+..
T Consensus 260 ~i~vwd~~~~~ 270 (312)
T 4ery_A 260 LVYIWNLQTKE 270 (312)
T ss_dssp CEEEEETTTCC
T ss_pred EEEEEECCCch
Confidence 58889987765
No 45
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=96.41 E-value=0.18 Score=46.46 Aligned_cols=190 Identities=8% Similarity=-0.085 Sum_probs=100.0
Q ss_pred cCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCC-CeEEEEecCCC
Q 010770 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI-WQWSELTSFGD 122 (501)
Q Consensus 44 ~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t-~~W~~~~~~~~ 122 (501)
....++++|+.+++...+.... ......+..-+++.+++++ ...++++|+.+ .+...+..
T Consensus 20 ~~~~i~~~d~~~~~~~~~~~~~----------~~v~~~~~spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~--- 80 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMRVVWQTP----------ELFEAPNWSPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDT--- 80 (297)
T ss_dssp CCEEEEEEETTTTEEEEEEEES----------SCCEEEEECTTSSEEEEEE------TTEEEEEESSSCCSCEECCC---
T ss_pred cceeEEEEeCCCCceeeeccCC----------cceEeeEECCCCCEEEEEc------CCeEEEEeCCCCCCceEecc---
Confidence 3467999999998877654321 1112222223556556654 13799999998 77666542
Q ss_pred CCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CC-EEEEEcccCCCC
Q 010770 123 LPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGG 200 (501)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~ 200 (501)
.+......+++...+++.+++++.... ....+|.++..+.+-..+.. .. . ...+... ++ .|++.++....
T Consensus 81 ~~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~~~~~~~~~~~~~~---~~-~--~~~~~~spdg~~l~~~~~~~~~- 152 (297)
T 2ojh_A 81 GFATICNNDHGISPDGALYAISDKVEF-GKSAIYLLPSTGGTPRLMTK---NL-P--SYWHGWSPDGKSFTYCGIRDQV- 152 (297)
T ss_dssp TTCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEEEETTCCCCEECCS---SS-S--EEEEEECTTSSEEEEEEEETTE-
T ss_pred ccccccccceEECCCCCEEEEEEeCCC-CcceEEEEECCCCceEEeec---CC-C--ccceEECCCCCEEEEEECCCCc-
Confidence 222122233444456666666664322 34668999988877665541 11 1 2222333 34 45545543211
Q ss_pred CcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCE-EEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 201 PIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHY-LLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 201 ~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~-i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
..++.+|..+.....+.. .+ ... ..++. -++. +++.+.... ...+|.+++....
T Consensus 153 ---------~~l~~~~~~~~~~~~~~~---~~-~~~-~~~~~s~dg~~l~~~~~~~~----------~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 153 ---------FDIYSMDIDSGVETRLTH---GE-GRN-DGPDYSPDGRWIYFNSSRTG----------QMQIWRVRVDGSS 208 (297)
T ss_dssp ---------EEEEEEETTTCCEEECCC---SS-SCE-EEEEECTTSSEEEEEECTTS----------SCEEEEEETTSSC
T ss_pred ---------eEEEEEECCCCcceEccc---CC-Ccc-ccceECCCCCEEEEEecCCC----------CccEEEECCCCCC
Confidence 234445666666655541 11 111 22232 3444 444443221 2578999887777
Q ss_pred eEEccc
Q 010770 279 WKRLPI 284 (501)
Q Consensus 279 W~~v~~ 284 (501)
...+..
T Consensus 209 ~~~~~~ 214 (297)
T 2ojh_A 209 VERITD 214 (297)
T ss_dssp EEECCC
T ss_pred cEEEec
Confidence 766654
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.37 E-value=0.14 Score=49.41 Aligned_cols=110 Identities=7% Similarity=0.044 Sum_probs=61.9
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-C--CEEEEEccccCCCCCCcEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D--CHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~--~~iyv~GG~~~~~~~~~~~ 105 (501)
.++..++.|+.+ ..+.+||.....+..+..... .. ..-.+++.. + +.+++.|+.+ ..+.
T Consensus 21 ~~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~~-------h~-~~v~~~~~~~~~~~~~l~s~~~d-----g~v~ 82 (379)
T 3jrp_A 21 YYGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG-------HE-GPVWRVDWAHPKFGTILASCSYD-----GKVL 82 (379)
T ss_dssp SSSSEEEEEETT-----SCEEEEEEETTEEEEEEEECC-------CS-SCEEEEEECCGGGCSEEEEEETT-----SCEE
T ss_pred CCCCEEEEEECC-----CcEEEEecCCCcceeeeEecC-------CC-CcEEEEEeCCCCCCCEEEEeccC-----CEEE
Confidence 445667777643 347888887777766543311 11 111223332 2 5677777654 3588
Q ss_pred EEECCCCeEEEEecCCCCCCcCCccEEEEEcC--cEEEEEecCCCCcccccEEEEECCCC
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
+||..+++|..+..... ......+++...+ +.+++.|+.++ .+.+||+.+.
T Consensus 83 iwd~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~d~-----~i~v~d~~~~ 135 (379)
T 3jrp_A 83 IWKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 135 (379)
T ss_dssp EEEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCTT
T ss_pred EEEcCCCceeEeeeecC--CCcceEEEEeCCCCCCCEEEEecCCC-----cEEEEecCCC
Confidence 89999998877654211 1112223333333 56777777543 4778888765
No 47
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.35 E-value=0.74 Score=45.87 Aligned_cols=216 Identities=13% Similarity=0.091 Sum_probs=108.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEEC
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
++..++.|+.+ ..+.+||..+.+-...-. .....-.++..++.+++.|+.++ .+.++|.
T Consensus 142 d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~-----------~h~~~v~~l~~~~~~l~sg~~dg-----~i~vwd~ 200 (435)
T 1p22_A 142 DDQKIVSGLRD-----NTIKIWDKNTLECKRILT-----------GHTGSVLCLQYDERVIITGSSDS-----TVRVWDV 200 (435)
T ss_dssp CSSEEEEEESS-----SCEEEEESSSCCEEEEEC-----------CCSSCEEEEECCSSEEEEEETTS-----CEEEEES
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeEEEEEc-----------CCCCcEEEEEECCCEEEEEcCCC-----eEEEEEC
Confidence 35677777754 358899998776543221 11112233444777778887543 5889999
Q ss_pred CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCE
Q 010770 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKR 189 (501)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~ 189 (501)
.+++-...-. .....-.++.+.+ ..++.|+.++ .+.+||+.+..-..... ...........+..++.
T Consensus 201 ~~~~~~~~~~-----~h~~~v~~l~~~~-~~l~s~s~dg-----~i~vwd~~~~~~~~~~~--~~~~~~~~v~~~~~~~~ 267 (435)
T 1p22_A 201 NTGEMLNTLI-----HHCEAVLHLRFNN-GMMVTCSKDR-----SIAVWDMASPTDITLRR--VLVGHRAAVNVVDFDDK 267 (435)
T ss_dssp SSCCEEEEEC-----CCCSCEEEEECCT-TEEEEEETTS-----CEEEEECSSSSCCEEEE--EECCCSSCEEEEEEETT
T ss_pred CCCcEEEEEc-----CCCCcEEEEEEcC-CEEEEeeCCC-----cEEEEeCCCCCCceeee--EecCCCCcEEEEEeCCC
Confidence 8876543321 1111222333434 4666676543 47888887654321100 00111111222333555
Q ss_pred EEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeE
Q 010770 190 LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDT 269 (501)
Q Consensus 190 lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v 269 (501)
.++.|+.. ..+..||+.+.+-...-. .... ...++..++.+++.|+.+ +.+
T Consensus 268 ~l~s~~~d------------g~i~vwd~~~~~~~~~~~--~~~~---~v~~~~~~~~~l~~g~~d------------g~i 318 (435)
T 1p22_A 268 YIVSASGD------------RTIKVWNTSTCEFVRTLN--GHKR---GIACLQYRDRLVVSGSSD------------NTI 318 (435)
T ss_dssp EEEEEETT------------SEEEEEETTTCCEEEEEE--CCSS---CEEEEEEETTEEEEEETT------------SCE
T ss_pred EEEEEeCC------------CeEEEEECCcCcEEEEEc--CCCC---cEEEEEeCCCEEEEEeCC------------CeE
Confidence 55666543 234566777665432221 1111 112222345566666543 358
Q ss_pred EEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCC
Q 010770 270 IILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (501)
Q Consensus 270 ~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 313 (501)
.+||+.+..-...-.. ....-.++..++..++.|+.++.
T Consensus 319 ~iwd~~~~~~~~~~~~-----h~~~v~~~~~~~~~l~sg~~dg~ 357 (435)
T 1p22_A 319 RLWDIECGACLRVLEG-----HEELVRCIRFDNKRIVSGAYDGK 357 (435)
T ss_dssp EEEETTTCCEEEEECC-----CSSCEEEEECCSSEEEEEETTSC
T ss_pred EEEECCCCCEEEEEeC-----CcCcEEEEEecCCEEEEEeCCCc
Confidence 8999887643222111 11112233447788888887654
No 48
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.31 E-value=0.8 Score=45.25 Aligned_cols=200 Identities=9% Similarity=-0.037 Sum_probs=101.1
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE--eCCEEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
++.+++.++.+ ..+.++|+.+++........ ..........++. -++.+|+.|+.+ ..+.+|
T Consensus 133 ~~~~~~~~~~~-----~~i~~~d~~~g~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~~~s~~~d-----~~v~~~ 196 (433)
T 3bws_A 133 NTRLAIPLLED-----EGMDVLDINSGQTVRLSPPE------KYKKKLGFVETISIPEHNELWVSQMQA-----NAVHVF 196 (433)
T ss_dssp SSEEEEEBTTS-----SSEEEEETTTCCEEEECCCH------HHHTTCCEEEEEEEGGGTEEEEEEGGG-----TEEEEE
T ss_pred CCeEEEEeCCC-----CeEEEEECCCCeEeeecCcc------cccccCCceeEEEEcCCCEEEEEECCC-----CEEEEE
Confidence 46777777643 35999999988766532110 0001111112222 267888887643 368999
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (501)
|+.+.+....-. . ....-.+++...++ .+|+.++.+ ..+.+||+.+.+....- . ....-..++..
T Consensus 197 d~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~l~~~~~~~-----~~i~~~d~~~~~~~~~~---~--~~~~~~~~~~~ 262 (433)
T 3bws_A 197 DLKTLAYKATVD---L-TGKWSKILLYDPIRDLVYCSNWIS-----EDISVIDRKTKLEIRKT---D--KIGLPRGLLLS 262 (433)
T ss_dssp ETTTCCEEEEEE---C-SSSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTTTEEEEEC---C--CCSEEEEEEEC
T ss_pred ECCCceEEEEEc---C-CCCCeeEEEEcCCCCEEEEEecCC-----CcEEEEECCCCcEEEEe---c--CCCCceEEEEc
Confidence 998866543321 1 11122333444343 566666543 35899999888765432 1 11112233333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~ 263 (501)
+++.+++++.........| ..+..||+.+.+-..... .+. ....++. .++.+|+.++.+
T Consensus 263 ~~g~~l~~~~~~~~~~~~~d----g~i~~~d~~~~~~~~~~~---~~~--~~~~~~~~~~g~~l~~~~~~~--------- 324 (433)
T 3bws_A 263 KDGKELYIAQFSASNQESGG----GRLGIYSMDKEKLIDTIG---PPG--NKRHIVSGNTENKIYVSDMCC--------- 324 (433)
T ss_dssp TTSSEEEEEEEESCTTCSCC----EEEEEEETTTTEEEEEEE---EEE--CEEEEEECSSTTEEEEEETTT---------
T ss_pred CCCCEEEEEECCCCccccCC----CeEEEEECCCCcEEeecc---CCC--CcceEEECCCCCEEEEEecCC---------
Confidence 4444444443221100001 356677887765443321 111 1112232 234677776533
Q ss_pred cccCeEEEEEcCCCceE
Q 010770 264 IYYNDTIILDRLSAQWK 280 (501)
Q Consensus 264 ~~~~~v~~yd~~~~~W~ 280 (501)
+.+.+||+.+.+-.
T Consensus 325 ---~~v~v~d~~~~~~~ 338 (433)
T 3bws_A 325 ---SKIEVYDLKEKKVQ 338 (433)
T ss_dssp ---TEEEEEETTTTEEE
T ss_pred ---CEEEEEECCCCcEE
Confidence 46899998876543
No 49
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=96.29 E-value=0.81 Score=43.57 Aligned_cols=226 Identities=9% Similarity=-0.048 Sum_probs=111.6
Q ss_pred cEEEEEcccCC-CccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeC-CEEEEEccccCCCCCCcEEEEE
Q 010770 31 SKVVVFGGLVD-KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAID-CHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 31 ~~iyv~GG~~~-~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~-~~iyv~GG~~~~~~~~~~~~yd 108 (501)
+.+|+...... ......++++|+.+++-......+ .+....+..-+ +.+|+.++.. +.++++|
T Consensus 53 ~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~----------~~~~~~~~s~dg~~l~v~~~~~-----~~v~~~d 117 (353)
T 3vgz_A 53 NALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHND----------LKPFGATINNTTQTLWFGNTVN-----SAVTAID 117 (353)
T ss_dssp TEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEES----------SCCCSEEEETTTTEEEEEETTT-----TEEEEEE
T ss_pred CEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecC----------CCcceEEECCCCCEEEEEecCC-----CEEEEEe
Confidence 46776653211 122467999999988654433221 11122233334 4588776532 3799999
Q ss_pred CCCCeEEEEecCCCCCC-----cCCccEEEEEcC-cEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCccee
Q 010770 109 TDIWQWSELTSFGDLPS-----PRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~-----~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (501)
+.+.+-......+.... +..-+.++...+ +.+|+.+... ...++++|+.+.+-...-. . ....-+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~----~~~i~~~d~~~~~~~~~~~---~-~~~~~~~ 189 (353)
T 3vgz_A 118 AKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK----ESVIWVVDGGNIKLKTAIQ---N-TGKMSTG 189 (353)
T ss_dssp TTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS----SCEEEEEETTTTEEEEEEC---C-CCTTCCC
T ss_pred CCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC----CceEEEEcCCCCceEEEec---C-CCCccce
Confidence 98887543332111111 011233444444 3677765321 2458999998876544321 0 1111122
Q ss_pred EEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCC
Q 010770 183 ATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGW 258 (501)
Q Consensus 183 ~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~ 258 (501)
++.. ++.+|+.... ..+..||+.+.+-......+.........++++ .++.+|+....
T Consensus 190 ~~~s~dg~~l~~~~~~-------------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~----- 251 (353)
T 3vgz_A 190 LALDSEGKRLYTTNAD-------------GELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK----- 251 (353)
T ss_dssp CEEETTTTEEEEECTT-------------SEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS-----
T ss_pred EEECCCCCEEEEEcCC-------------CeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC-----
Confidence 3333 4567775431 234567887765443321111111112223333 35567776532
Q ss_pred CcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE--CCEEEEEccC
Q 010770 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGF 310 (501)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~--~~~iyv~GG~ 310 (501)
.+.+++||+.+.+....-..+. + ..++.. ++.+|+.+..
T Consensus 252 -------~~~v~~~d~~~~~~~~~~~~~~---~---~~~~~s~dg~~l~v~~~~ 292 (353)
T 3vgz_A 252 -------AAEVLVVDTRNGNILAKVAAPE---S---LAVLFNPARNEAYVTHRQ 292 (353)
T ss_dssp -------SSEEEEEETTTCCEEEEEECSS---C---CCEEEETTTTEEEEEETT
T ss_pred -------CCEEEEEECCCCcEEEEEEcCC---C---ceEEECCCCCEEEEEECC
Confidence 2579999998877554333221 2 123322 4567776643
No 50
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=96.18 E-value=0.34 Score=47.99 Aligned_cols=206 Identities=9% Similarity=-0.056 Sum_probs=100.0
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~ 106 (501)
.++.+++.|+.+ ..+.+||+.+++....-.. ... .-.+++.. +..+|+.++.+ ..+.+
T Consensus 179 ~~~~~~~s~~~d-----~~v~~~d~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~l~~~~~~~-----~~i~~ 238 (433)
T 3bws_A 179 EHNELWVSQMQA-----NAVHVFDLKTLAYKATVDL---------TGK-WSKILLYDPIRDLVYCSNWIS-----EDISV 238 (433)
T ss_dssp GGTEEEEEEGGG-----TEEEEEETTTCCEEEEEEC---------SSS-SEEEEEEETTTTEEEEEETTT-----TEEEE
T ss_pred CCCEEEEEECCC-----CEEEEEECCCceEEEEEcC---------CCC-CeeEEEEcCCCCEEEEEecCC-----CcEEE
Confidence 345677666632 4588999987654432211 111 12223333 34677766432 36899
Q ss_pred EECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCc---ccccEEEEECCCCceEEcccCCCCCCCCcceeE
Q 010770 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---WLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 183 (501)
||+.+.+...... ......+++...++..+++++..... .-..+++||+.+.+-.... ..+. .-..+
T Consensus 239 ~d~~~~~~~~~~~-----~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~---~~~~--~~~~~ 308 (433)
T 3bws_A 239 IDRKTKLEIRKTD-----KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI---GPPG--NKRHI 308 (433)
T ss_dssp EETTTTEEEEECC-----CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE---EEEE--CEEEE
T ss_pred EECCCCcEEEEec-----CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec---cCCC--CcceE
Confidence 9999887654432 22222334444455444555432221 1346889999887654432 1111 11122
Q ss_pred EEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCC-EEEEEcCCCCCCC-
Q 010770 184 TMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGH-YLLLFGGHGTGGW- 258 (501)
Q Consensus 184 ~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~-~i~v~GG~~~~~~- 258 (501)
+.. ++.+|+.++.. ..+..||+.+.+-...-. ....-.+++. -++ .+|+.+.... ..
T Consensus 309 ~~~~~g~~l~~~~~~~------------~~v~v~d~~~~~~~~~~~-----~~~~~~~~~~s~dg~~l~~~~~~~~-~~~ 370 (433)
T 3bws_A 309 VSGNTENKIYVSDMCC------------SKIEVYDLKEKKVQKSIP-----VFDKPNTIALSPDGKYLYVSCRGPN-HPT 370 (433)
T ss_dssp EECSSTTEEEEEETTT------------TEEEEEETTTTEEEEEEE-----CSSSEEEEEECTTSSEEEEEECCCC-CTT
T ss_pred EECCCCCEEEEEecCC------------CEEEEEECCCCcEEEEec-----CCCCCCeEEEcCCCCEEEEEecCCC-ccc
Confidence 222 34688776542 345667877665433221 1111223443 233 4555443211 00
Q ss_pred --CcccccccCeEEEEEcCCCceEEc
Q 010770 259 --LSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 259 --~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
..........+++||+.+.+....
T Consensus 371 ~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 371 EGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp TCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred cccccccccceEEEEEECCCCcEEEE
Confidence 000000124799999988765443
No 51
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.11 E-value=0.77 Score=43.82 Aligned_cols=178 Identities=11% Similarity=-0.030 Sum_probs=89.3
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++.|+.+ ..+.++|..+.+-...-. ..+ ....+++...++..++.|+.++ .+.+||..+.+-
T Consensus 91 ~~~~l~s~s~D-----~~i~lWd~~~~~~~~~~~--~~~--~~~~~~~~spdg~~l~~g~~dg-----~v~i~~~~~~~~ 156 (321)
T 3ow8_A 91 TLPIAASSSLD-----AHIRLWDLENGKQIKSID--AGP--VDAWTLAFSPDSQYLATGTHVG-----KVNIFGVESGKK 156 (321)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTTEEEEEEE--CCT--TCCCCEEECTTSSEEEEECTTS-----EEEEEETTTCSE
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCCEEEEEe--CCC--ccEEEEEECCCCCEEEEEcCCC-----cEEEEEcCCCce
Confidence 44566666644 358889998876543322 111 1223445556667778877543 478888877654
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-e
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~ 243 (501)
...- .. ....-.+++.. +++.++.|+.. ..+..||+.+.+-...- .+ ...+ . .+++. -
T Consensus 157 ~~~~---~~-~~~~v~~~~~spdg~~lasg~~d------------g~i~iwd~~~~~~~~~~-~~-h~~~-v-~~l~~sp 216 (321)
T 3ow8_A 157 EYSL---DT-RGKFILSIAYSPDGKYLASGAID------------GIINIFDIATGKLLHTL-EG-HAMP-I-RSLTFSP 216 (321)
T ss_dssp EEEE---EC-SSSCEEEEEECTTSSEEEEEETT------------SCEEEEETTTTEEEEEE-CC-CSSC-C-CEEEECT
T ss_pred eEEe---cC-CCceEEEEEECCCCCEEEEEcCC------------CeEEEEECCCCcEEEEE-cc-cCCc-e-eEEEEcC
Confidence 3221 00 11111222222 56667777653 23456677766543221 11 1111 1 12333 3
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
++.+++.|+.+ ..+.+||+.+......-... ...-.+++.. ++.+++.|+.++.
T Consensus 217 d~~~l~s~s~d------------g~i~iwd~~~~~~~~~~~~h----~~~v~~~~~sp~~~~l~s~s~D~~ 271 (321)
T 3ow8_A 217 DSQLLVTASDD------------GYIKIYDVQHANLAGTLSGH----ASWVLNVAFCPDDTHFVSSSSDKS 271 (321)
T ss_dssp TSCEEEEECTT------------SCEEEEETTTCCEEEEECCC----SSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCEEEEEcCC------------CeEEEEECCCcceeEEEcCC----CCceEEEEECCCCCEEEEEeCCCc
Confidence 55677777654 35888998776543322111 1111222222 4667777876653
No 52
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=96.11 E-value=0.86 Score=42.16 Aligned_cols=220 Identities=10% Similarity=-0.047 Sum_probs=112.8
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (501)
.++...++.+|+.... ...+++||+. +....+... .....-+.++.. ++.+|+.... ..
T Consensus 61 ~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~-----~~ 120 (299)
T 2z2n_A 61 CLTISSDGEVWFTENA-----ANKIGRITKK-GIIKEYTLP---------NPDSAPYGITEGPNGDIWFTEMN-----GN 120 (299)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETT-----TT
T ss_pred eEEECCCCCEEEeCCC-----CCeEEEECCC-CcEEEEeCC---------CcCCCceeeEECCCCCEEEEecC-----Cc
Confidence 3444355677776432 1348888886 555444311 011122344444 5688886432 24
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCccee
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (501)
.++++|+ +++....... .......+++...++.+|+.... ...+++||+ +.+...+..... ...-..
T Consensus 121 ~i~~~d~-~g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~---~~~~~~ 187 (299)
T 2z2n_A 121 RIGRITD-DGKIREYELP---NKGSYPSFITLGSDNALWFTENQ-----NNAIGRITE-SGDITEFKIPTP---ASGPVG 187 (299)
T ss_dssp EEEEECT-TCCEEEEECS---STTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSST---TCCEEE
T ss_pred eEEEECC-CCCEEEecCC---CCCCCCceEEEcCCCCEEEEeCC-----CCEEEEEcC-CCcEEEeeCCCC---CCccee
Confidence 6889998 6666655421 11122234444456788886421 245899999 777776532111 111123
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCc
Q 010770 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (501)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~ 260 (501)
++.. ++++|+..... ..+.+||+ +..+.....+. +. ..-.+++. .++.+|+....
T Consensus 188 i~~~~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~--~~-~~~~~i~~~~~g~l~v~~~~------- 244 (299)
T 2z2n_A 188 ITKGNDDALWFVEIIG------------NKIGRITT-SGEITEFKIPT--PN-ARPHAITAGAGIDLWFTEWG------- 244 (299)
T ss_dssp EEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSS--TT-CCEEEEEECSTTCEEEEETT-------
T ss_pred EEECCCCCEEEEccCC------------ceEEEECC-CCcEEEEECCC--CC-CCceeEEECCCCCEEEeccC-------
Confidence 3333 46788764321 34567788 77776654221 11 12223444 35677775421
Q ss_pred ccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 261 RYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 261 ~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
.+.+.+||+ +.....+..... .....+++.-++.+|+..
T Consensus 245 -----~~~i~~~d~-~g~~~~~~~~~~---~~~~~~i~~~~g~l~v~~ 283 (299)
T 2z2n_A 245 -----ANKIGRLTS-NNIIEEYPIQIK---SAEPHGICFDGETIWFAM 283 (299)
T ss_dssp -----TTEEEEEET-TTEEEEEECSSS---SCCEEEEEECSSCEEEEE
T ss_pred -----CceEEEECC-CCceEEEeCCCC---CCccceEEecCCCEEEEe
Confidence 246899998 445544432111 112234444556777764
No 53
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.74 Score=43.91 Aligned_cols=110 Identities=9% Similarity=-0.147 Sum_probs=59.5
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++..++.|+.+ ..+.+||..+++-...-. ..... -.+++.. ++..++.|+.+ ..+.+|
T Consensus 42 ~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~---------~h~~~-v~~~~~~~~~~~l~s~~~d-----g~i~iw 101 (369)
T 3zwl_B 42 KEGDLLFSCSKD-----SSASVWYSLNGERLGTLD---------GHTGT-IWSIDVDCFTKYCVTGSAD-----YSIKLW 101 (369)
T ss_dssp TTSCEEEEEESS-----SCEEEEETTTCCEEEEEC---------CCSSC-EEEEEECTTSSEEEEEETT-----TEEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEeCCCchhhhhhh---------hcCCc-EEEEEEcCCCCEEEEEeCC-----CeEEEE
Confidence 445666776643 358899988776443221 01111 1222222 45666777643 368899
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
|+.+.+...... ......+++...++..++.++.+.......+..||+.+.
T Consensus 102 d~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~ 152 (369)
T 3zwl_B 102 DVSNGQCVATWK-----SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERD 152 (369)
T ss_dssp ETTTCCEEEEEE-----CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEEC
T ss_pred ECCCCcEEEEee-----cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCC
Confidence 998877555432 122223444445666777766542223345777776543
No 54
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.05 E-value=1.1 Score=42.99 Aligned_cols=239 Identities=15% Similarity=0.149 Sum_probs=117.9
Q ss_pred cceEEeeeCCCCCCCCCCCcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeE
Q 010770 2 HYWVRASSSDFGGTVPQPRSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHI 81 (501)
Q Consensus 2 ~~W~~~~~~~~~g~~P~~R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~ 81 (501)
..|+++.. |....-.++...+++.+|+.|-. .-+++-.-.-.+|+.+..... .......+
T Consensus 25 ~~W~~~~~-------~~~~~~~~v~~~~~~~~~~~G~~------g~i~~s~DgG~tW~~~~~~~~-------~~~~~~~~ 84 (327)
T 2xbg_A 25 NPWEAIQL-------PTTATILDMSFIDRHHGWLVGVN------ATLMETRDGGQTWEPRTLVLD-------HSDYRFNS 84 (327)
T ss_dssp CCEEEEEC-------SCSSCEEEEEESSSSCEEEEETT------TEEEEESSTTSSCEECCCCCS-------CCCCEEEE
T ss_pred CCceEeec-------CCCCcEEEEEECCCCcEEEEcCC------CeEEEeCCCCCCCeECCCCCC-------CCCccEEE
Confidence 35888752 22222233333445678886532 124443333458998753210 11112334
Q ss_pred EEEeCCEEEEEccccCCCCCCcEEEEECC-CCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEEC
Q 010770 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTD-IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDT 160 (501)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 160 (501)
+...++.+|+.|-. ..+++ ..+ -.+|+.+......|. ..+.++...++.+|+.|.. ..+++-+-
T Consensus 85 i~~~~~~~~~~g~~------g~i~~-S~DgG~tW~~~~~~~~~~~--~~~~i~~~~~~~~~~~~~~------g~v~~S~D 149 (327)
T 2xbg_A 85 VSFQGNEGWIVGEP------PIMLH-TTDGGQSWSQIPLDPKLPG--SPRLIKALGNGSAEMITNV------GAIYRTKD 149 (327)
T ss_dssp EEEETTEEEEEEET------TEEEE-ESSTTSSCEECCCCTTCSS--CEEEEEEEETTEEEEEETT------CCEEEESS
T ss_pred EEecCCeEEEEECC------CeEEE-ECCCCCCceECccccCCCC--CeEEEEEECCCCEEEEeCC------ccEEEEcC
Confidence 44456788887521 12333 333 468999864211222 2344444556788888742 13555443
Q ss_pred CCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeE
Q 010770 161 ISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (501)
Q Consensus 161 ~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s 239 (501)
.-.+|+.+.. +....-+.++.. ++.+|++|-. + .++.. -|....+|+.+.. +.+...+.
T Consensus 150 gG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~-G------~~~~S-----~d~gG~tW~~~~~----~~~~~~~~ 209 (327)
T 2xbg_A 150 SGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR-G------SFYST-----WEPGQTAWEPHNR----TTSRRLHN 209 (327)
T ss_dssp TTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT-S------SEEEE-----ECTTCSSCEEEEC----CSSSCEEE
T ss_pred CCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC-C------cEEEE-----eCCCCCceeECCC----CCCCccce
Confidence 4678999862 112223344443 4567766522 1 11221 1333678998862 22333444
Q ss_pred EEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcC-CCceEEcccCCCCCCcccceEEEEE-CCEEEEEcc
Q 010770 240 ITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL-SAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGG 309 (501)
Q Consensus 240 ~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~-~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG 309 (501)
++. .++.+|+.+.. ..+++.+.+ ..+|+.+..... +.....++++.. ++.+|+.|+
T Consensus 210 ~~~~~~g~~~~~~~~-------------G~~~~s~~D~G~tW~~~~~~~~-~~~~~~~~v~~~~~~~~~~~g~ 268 (327)
T 2xbg_A 210 MGFTPDGRLWMIVNG-------------GKIAFSDPDNSENWGELLSPLR-RNSVGFLDLAYRTPNEVWLAGG 268 (327)
T ss_dssp EEECTTSCEEEEETT-------------TEEEEEETTEEEEECCCBCTTS-SCCSCEEEEEESSSSCEEEEES
T ss_pred eEECCCCCEEEEeCC-------------ceEEEecCCCCCeeEeccCCcc-cCCcceEEEEecCCCEEEEEeC
Confidence 444 45678877642 124444333 568988764211 111222344333 567888876
No 55
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=96.04 E-value=0.49 Score=50.84 Aligned_cols=217 Identities=12% Similarity=0.048 Sum_probs=111.1
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCC----------
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS---------- 98 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~---------- 98 (501)
.+++.++|+...++.....++++|+.+++........ ......+.+-+++.++++.....
T Consensus 134 PDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~----------~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 134 EDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER----------VKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp TTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE----------ECSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC----------cccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 4456666654434444457999999999887643211 11112222225544444433322
Q ss_pred -CCCCcEEEEECCCCeEE--EEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC------C--ceEE
Q 010770 99 -RRLGDFWVLDTDIWQWS--ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS------L--EWMQ 167 (501)
Q Consensus 99 -~~~~~~~~yd~~t~~W~--~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t------~--~W~~ 167 (501)
.....++++++.+.+.. .+.. ....+....+.....+++.++++........+.++.+|..+ . .+..
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~--~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAE--FPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cCCCCEEEEEECCCCcccceEEec--cCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 22456899999877632 2221 11122333344445565544444432222256799999876 4 5777
Q ss_pred cccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCC---ceEEeecCCCCCCCceeeEEEEe-
Q 010770 168 LPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP---GWTQLKLPGQAPSSRCGHTITSG- 243 (501)
Q Consensus 168 ~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~---~W~~~~~~g~~p~~r~~~s~~~~- 243 (501)
+.. ..... .......++.||+.+...... ..+..+|+.+. .|+.+... .....-..++..
T Consensus 282 l~~---~~~~~-~~~~s~dg~~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~---~~~~~~~~~~~~~ 345 (710)
T 2xdw_A 282 LID---NFEGE-YDYVTNEGTVFTFKTNRHSPN---------YRLINIDFTDPEESKWKVLVPE---HEKDVLEWVACVR 345 (710)
T ss_dssp EEC---SSSSC-EEEEEEETTEEEEEECTTCTT---------CEEEEEETTSCCGGGCEEEECC---CSSCEEEEEEEET
T ss_pred eeC---CCCcE-EEEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCCcccceeccCC---CCCCeEEEEEEEc
Confidence 752 11111 112223367888887543211 23455577665 58887621 111122233334
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc-eEEcc
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ-WKRLP 283 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~-W~~v~ 283 (501)
++.+++...... ...++++|+.+.. ...+.
T Consensus 346 ~~~lv~~~~~~g----------~~~l~~~~~~~g~~~~~l~ 376 (710)
T 2xdw_A 346 SNFLVLCYLHDV----------KNTLQLHDLATGALLKIFP 376 (710)
T ss_dssp TTEEEEEEEETT----------EEEEEEEETTTCCEEEEEC
T ss_pred CCEEEEEEEECC----------EEEEEEEECCCCCEEEecC
Confidence 677777664332 3568999985544 44444
No 56
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=96.01 E-value=0.099 Score=48.88 Aligned_cols=133 Identities=11% Similarity=-0.002 Sum_probs=84.8
Q ss_pred EEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccc
Q 010770 134 AIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLI 213 (501)
Q Consensus 134 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~ 213 (501)
.+.++.||+..|..+. +.++|+.|++=..-. ++...++.+++..+++||+..... +.+.
T Consensus 61 ~~~~~~Ly~stG~~g~-----v~~iD~~Tgkv~~~~----l~~~~FgeGit~~g~~Ly~ltw~~------------~~v~ 119 (268)
T 3nok_A 61 VFHQGHFFESTGHQGT-----LRQLSLESAQPVWME----RLGNIFAEGLASDGERLYQLTWTE------------GLLF 119 (268)
T ss_dssp EEETTEEEEEETTTTE-----EEECCSSCSSCSEEE----ECTTCCEEEEEECSSCEEEEESSS------------CEEE
T ss_pred EEECCEEEEEcCCCCE-----EEEEECCCCcEEeEE----CCCCcceeEEEEeCCEEEEEEccC------------CEEE
Confidence 3445699999986543 889999988754321 334446677888899999985432 5567
Q ss_pred cccCCCCceEE-eecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE-cccCCCCCCc
Q 010770 214 EEENETPGWTQ-LKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPA 291 (501)
Q Consensus 214 ~Yd~~t~~W~~-~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-v~~~~~~p~~ 291 (501)
+||+++.+-.. ++ .+..+.+++..++.+|+.-| + +.++++|+.+.+-.. +..... +.+
T Consensus 120 V~D~~Tl~~~~ti~------~~~eGwGLt~Dg~~L~vSdG-s------------~~l~~iDp~T~~v~~~I~V~~~-g~~ 179 (268)
T 3nok_A 120 TWSGMPPQRERTTR------YSGEGWGLCYWNGKLVRSDG-G------------TMLTFHEPDGFALVGAVQVKLR-GQP 179 (268)
T ss_dssp EEETTTTEEEEEEE------CSSCCCCEEEETTEEEEECS-S------------SEEEEECTTTCCEEEEEECEET-TEE
T ss_pred EEECCcCcEEEEEe------CCCceeEEecCCCEEEEECC-C------------CEEEEEcCCCCeEEEEEEeCCC-Ccc
Confidence 88988765542 33 22345677778889999765 2 579999999876443 332111 111
Q ss_pred c-cceEEEEECCEEEEE
Q 010770 292 R-AYHSMTCLGSLYLLF 307 (501)
Q Consensus 292 r-~~~~~~~~~~~iyv~ 307 (501)
. .-..+...+++||+-
T Consensus 180 v~~lNeLe~~dG~lyan 196 (268)
T 3nok_A 180 VELINELECANGVIYAN 196 (268)
T ss_dssp CCCEEEEEEETTEEEEE
T ss_pred cccccccEEeCCEEEEE
Confidence 1 112345568888853
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.01 E-value=0.68 Score=43.57 Aligned_cols=222 Identities=15% Similarity=0.061 Sum_probs=107.8
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEec-eecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQP-ECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l-~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~ 105 (501)
..++.+++.|+ + ..+.+||..+...... ..... ......-.+++.. ++..++.|+.+ ..+.
T Consensus 60 ~~~~~~l~~~~-d-----g~i~iw~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~ 122 (337)
T 1gxr_A 60 SNPTRHVYTGG-K-----GCVKVWDISHPGNKSPVSQLDC------LNRDNYIRSCKLLPDGCTLIVGGEA-----STLS 122 (337)
T ss_dssp CSSSSEEEEEC-B-----SEEEEEETTSTTCCSCSEEEEC------SCTTSBEEEEEECTTSSEEEEEESS-----SEEE
T ss_pred ecCCcEEEEcC-C-----CeEEEEECCCCCceeeeecccc------cCCCCcEEEEEEcCCCCEEEEEcCC-----CcEE
Confidence 34456666666 2 4588889876542211 11000 0111112222222 45666666543 3688
Q ss_pred EEECCCCeEEEEecCCCCCCcCC-ccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEE
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTAT 184 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~ 184 (501)
+||..+.+...... ...... ..+++...++..++.|+.++ .+.+||+.+.+....- ..... .-.++.
T Consensus 123 ~~d~~~~~~~~~~~---~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~v~~~d~~~~~~~~~~---~~~~~-~i~~~~ 190 (337)
T 1gxr_A 123 IWDLAAPTPRIKAE---LTSSAPACYALAISPDSKVCFSCCSDG-----NIAVWDLHNQTLVRQF---QGHTD-GASCID 190 (337)
T ss_dssp EEECCCC--EEEEE---EECSSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEE---CCCSS-CEEEEE
T ss_pred EEECCCCCcceeee---cccCCCceEEEEECCCCCEEEEEeCCC-----cEEEEeCCCCceeeee---ecccC-ceEEEE
Confidence 99998887544332 111111 22333444566777777543 4889999887654432 11111 112222
Q ss_pred Ee-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCccc
Q 010770 185 MV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (501)
Q Consensus 185 ~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~ 262 (501)
.. ++..++.|+.. ..+..||+.+.+-.... ..+.+ -.+++. -++..+++|+.+
T Consensus 191 ~~~~~~~l~~~~~d------------g~i~~~d~~~~~~~~~~---~~~~~--v~~~~~s~~~~~l~~~~~~-------- 245 (337)
T 1gxr_A 191 ISNDGTKLWTGGLD------------NTVRSWDLREGRQLQQH---DFTSQ--IFSLGYCPTGEWLAVGMES-------- 245 (337)
T ss_dssp ECTTSSEEEEEETT------------SEEEEEETTTTEEEEEE---ECSSC--EEEEEECTTSSEEEEEETT--------
T ss_pred ECCCCCEEEEEecC------------CcEEEEECCCCceEeee---cCCCc--eEEEEECCCCCEEEEEcCC--------
Confidence 22 55566666542 33556677766543322 11111 223333 345566666533
Q ss_pred ccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCC
Q 010770 263 DIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (501)
Q Consensus 263 ~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 312 (501)
..+.+||+.+..-..+... .....++... ++.+++.|+.++
T Consensus 246 ----~~i~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~l~~~~~dg 287 (337)
T 1gxr_A 246 ----SNVEVLHVNKPDKYQLHLH-----ESCVLSLKFAYCGKWFVSTGKDN 287 (337)
T ss_dssp ----SCEEEEETTSSCEEEECCC-----SSCEEEEEECTTSSEEEEEETTS
T ss_pred ----CcEEEEECCCCCeEEEcCC-----ccceeEEEECCCCCEEEEecCCC
Confidence 3588999887654433321 1112223322 466777777554
No 58
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.93 E-value=0.74 Score=50.21 Aligned_cols=226 Identities=13% Similarity=0.025 Sum_probs=115.3
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCC-CCCCcceeEEEEe-CCE-EEEEccccCCCCCCcE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQV-GPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLGDF 104 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~-~p~~R~~h~~~~~-~~~-iyv~GG~~~~~~~~~~ 104 (501)
..++.|+|- ... .-+.+||+.++.+........ ... ......-++++.. ++. ||+- .. ..-+
T Consensus 365 d~~g~lWiG-t~~-----~Gl~~~~~~~~~~~~~~~~~~---~~~~~l~~~~v~~i~~d~~g~~lWig-t~-----~~Gl 429 (795)
T 4a2l_A 365 DKDKNLWIG-TND-----GGLNLYNPITQRFTSYTLQED---ESARGIGSNNIKAVYVDEKKSLVYIG-TH-----AGGL 429 (795)
T ss_dssp CTTSCEEEE-ESS-----SCEEEECTTTCCEEEECCC---------CCSCSCEEEEEEETTTTEEEEE-ET-----TTEE
T ss_pred CCCCCEEEE-ECC-----CCeEEEcCCCCcEEEEecCCC---CcccCCCCccEEEEEEcCCCCEEEEE-eC-----cCce
Confidence 344567762 221 138889999888877642210 000 0011222344443 566 7763 21 1348
Q ss_pred EEEECCCCeEEEEecCC-CCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCC---CCCCCCcc
Q 010770 105 WVLDTDIWQWSELTSFG-DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG---SVPPPRCG 180 (501)
Q Consensus 105 ~~yd~~t~~W~~~~~~~-~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~---~~p~~r~~ 180 (501)
++||+.++++....... .++. ..-.+++...++.|++-.. +.+++||+.+.+|+.+.... .++....
T Consensus 430 ~~~d~~~~~~~~~~~~~~~l~~-~~v~~i~~d~~g~lwigt~-------~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i- 500 (795)
T 4a2l_A 430 SILHRNSGQVENFNQRNSQLVN-ENVYAILPDGEGNLWLGTL-------SALVRFNPEQRSFTTIEKEKDGTPVVSKQI- 500 (795)
T ss_dssp EEEETTTCCEEEECTTTSCCSC-SCEEEEEECSSSCEEEEES-------SCEEEEETTTTEEEECCBCTTCCBCCCCCE-
T ss_pred eEEeCCCCcEEEeecCCCCcCC-CeeEEEEECCCCCEEEEec-------CceeEEeCCCCeEEEccccccccccCCceE-
Confidence 89999999888876411 1111 1122333334567777432 35999999999999875321 1111111
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeec---CCCCCCCceeeEEEE-eCCEEEEEcCCCC
Q 010770 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKL---PGQAPSSRCGHTITS-GGHYLLLFGGHGT 255 (501)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~---~g~~p~~r~~~s~~~-~~~~i~v~GG~~~ 255 (501)
.++... ++.|++-.. ..+.+||+.++.+ .... ....+... -.+++. .++.|++-..
T Consensus 501 ~~i~~d~~g~lWigt~--------------~Gl~~~~~~~~~~-~~~~~~~~~~l~~~~-i~~i~~d~~g~lWigT~--- 561 (795)
T 4a2l_A 501 TTLFRDSHKRLWIGGE--------------EGLSVFKQEGLDI-QKASILPVSNVTKLF-TNCIYEASNGIIWVGTR--- 561 (795)
T ss_dssp EEEEECTTCCEEEEES--------------SCEEEEEEETTEE-EECCCSCSCGGGGSC-EEEEEECTTSCEEEEES---
T ss_pred EEEEECCCCCEEEEeC--------------CceEEEeCCCCeE-EEecCCCCCCCCCCe-eEEEEECCCCCEEEEeC---
Confidence 122222 567877432 2244668877777 4331 00111111 122222 4567776432
Q ss_pred CCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
+.+++||+.+.++.........|... ..+++.- ++.|++.+
T Consensus 562 -----------~Gl~~~d~~~~~~~~~~~~~gl~~~~-i~~i~~d~~g~lWi~t 603 (795)
T 4a2l_A 562 -----------EGFYCFNEKDKQIKRYNTTNGLPNNV-VYGILEDSFGRLWLST 603 (795)
T ss_dssp -----------SCEEEEETTTTEEEEECGGGTCSCSC-EEEEEECTTSCEEEEE
T ss_pred -----------CCceeECCCCCcEEEeCCCCCCchhh-eEEEEECCCCCEEEEc
Confidence 13889999999888775433233332 2333333 46677665
No 59
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=95.88 E-value=0.1 Score=56.83 Aligned_cols=109 Identities=7% Similarity=0.052 Sum_probs=62.8
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eC--CEEEEEccccCCCCCCcEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-ID--CHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~--~~iyv~GG~~~~~~~~~~~~ 106 (501)
++..++.||.+ ..+.+||..+..+..+..... .. ..-.+++. -+ +..++.|+.++ .+.+
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~l~~-------h~-~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~v 81 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDTLTG-------HE-GPVWRVDWAHPKFGTILASCSYDG-----KVLI 81 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEEECC-------CS-SCEEEEEECCTTSCSEEEEEETTS-----CEEE
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCccceeccC-------Cc-CceEEEEecCCCCCCEEEEEeCCC-----eEEE
Confidence 45666777653 358888888777777654321 11 11122222 23 56777777543 5888
Q ss_pred EECCCCeEEEEecCCCCCCcCCccEEEEEcC--cEEEEEecCCCCcccccEEEEECCCC
Q 010770 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
+|+.+++|..+..... ....-.+++...+ +.+++.|+.++ .+.+||+.+.
T Consensus 82 wd~~~~~~~~~~~~~~--h~~~V~~v~~sp~~~~~~l~sgs~dg-----~I~vwdl~~~ 133 (753)
T 3jro_A 82 WKEENGRWSQIAVHAV--HSASVNSVQWAPHEYGPLLLVASSDG-----KVSVVEFKEN 133 (753)
T ss_dssp EEEETTEEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEECCSS
T ss_pred EECCCCcccccccccC--CCCCeEEEEECCCCCCCEEEEEeCCC-----cEEEEEeecC
Confidence 9999998877654211 1122223333334 57788887644 4778887765
No 60
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.87 E-value=1.2 Score=44.35 Aligned_cols=175 Identities=14% Similarity=0.092 Sum_probs=85.4
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.+ ..+.+||+.+.+-...-. .......++.. ++..++.|+.++ .+.+||+.+.+-
T Consensus 208 ~~~~l~s~s~d-----g~i~~wd~~~~~~~~~~~-----~~~~~v~~~~~-~~~~l~~~~~dg-----~i~iwd~~~~~~ 271 (445)
T 2ovr_B 208 HEKRVVSGSRD-----ATLRVWDIETGQCLHVLM-----GHVAAVRCVQY-DGRRVVSGAYDF-----MVKVWDPETETC 271 (445)
T ss_dssp ETTEEEEEETT-----SEEEEEESSSCCEEEEEE-----CCSSCEEEEEE-CSSCEEEEETTS-----CEEEEEGGGTEE
T ss_pred cCCEEEEEeCC-----CEEEEEECCCCcEEEEEc-----CCcccEEEEEE-CCCEEEEEcCCC-----EEEEEECCCCcE
Confidence 44455666543 358888988776443321 11111223334 456677777543 478888877654
Q ss_pred EEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCC
Q 010770 166 MQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGH 245 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~ 245 (501)
...- .........+..++..++.|+.. ..+..||+.+.+-...- .+. .. .-.++... +
T Consensus 272 ~~~~-----~~~~~~v~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~-~~~--~~-~v~~~~~~-~ 329 (445)
T 2ovr_B 272 LHTL-----QGHTNRVYSLQFDGIHVVSGSLD------------TSIRVWDVETGNCIHTL-TGH--QS-LTSGMELK-D 329 (445)
T ss_dssp EEEE-----CCCSSCEEEEEECSSEEEEEETT------------SCEEEEETTTCCEEEEE-CCC--CS-CEEEEEEE-T
T ss_pred eEEe-----cCCCCceEEEEECCCEEEEEeCC------------CeEEEEECCCCCEEEEE-cCC--cc-cEEEEEEe-C
Confidence 3321 11111122333366666666653 23456677766543222 111 11 11122333 4
Q ss_pred EEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCC
Q 010770 246 YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 246 ~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 312 (501)
..++.|+.+ ..+.+||+.+..-...-.. .......-.++..++.+++.|+.++
T Consensus 330 ~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~--~~~~~~~v~~~~~~~~~l~s~~~dg 382 (445)
T 2ovr_B 330 NILVSGNAD------------STVKIWDIKTGQCLQTLQG--PNKHQSAVTCLQFNKNFVITSSDDG 382 (445)
T ss_dssp TEEEEEETT------------SCEEEEETTTCCEEEEECS--TTSCSSCEEEEEECSSEEEEEETTS
T ss_pred CEEEEEeCC------------CeEEEEECCCCcEEEEEcc--CCCCCCCEEEEEECCCEEEEEeCCC
Confidence 455556543 3588999876653322111 0111122233444677788887665
No 61
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=95.87 E-value=0.71 Score=45.82 Aligned_cols=213 Identities=13% Similarity=0.063 Sum_probs=92.1
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCc
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSP 126 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~ 126 (501)
.+.++|+.+++-..... ... ....++..++.+++.|+.+ ..+..+|............ . ..
T Consensus 170 ~v~iWd~~~~~~~~~~~---------~h~--~~v~~~s~~~~~l~sgs~d-----~~i~~~d~~~~~~~~~~~~--~-h~ 230 (420)
T 4gga_A 170 EVQLWDVQQQKRLRNMT---------SHS--ARVGSLSWNSYILSSGSRS-----GHIHHHDVRVAEHHVATLS--G-HS 230 (420)
T ss_dssp CEEEEETTTTEEEEEEC---------CCS--SCEEEEEEETTEEEEEETT-----SEEEEEETTSSSCEEEEEE--C-CS
T ss_pred eEEEEEcCCCcEEEEEe---------CCC--CceEEEeeCCCEEEEEeCC-----CceeEeeecccceeeEEec--c-cc
Confidence 46677777665333211 111 1223344566667776643 3466677655433222110 0 11
Q ss_pred CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE--EcccCCCCCCCCcc-eeEEEe--CCEEEEEcccCCCCC
Q 010770 127 RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM--QLPVTGSVPPPRCG-HTATMV--EKRLLIYGGRGGGGP 201 (501)
Q Consensus 127 r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~--~~~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~ 201 (501)
..........++..++.|+.++ .+.++|..+.+-. .+. ........ .+++.. +..+++.||...+
T Consensus 231 ~~~~~~~~~~~g~~l~s~~~D~-----~v~i~~~~~~~~~~~~~~---~~~~~~~~V~~~~~~p~~~~~la~~~gs~D-- 300 (420)
T 4gga_A 231 QEVCGLRWAPDGRHLASGGNDN-----LVNVWPSAPGEGGWVPLQ---TFTQHQGAVKAVAWCPWQSNVLATGGGTSD-- 300 (420)
T ss_dssp SCEEEEEECTTSSEEEEEETTS-----CEEEEESSCCSSCSCCSE---EECCCSSCEEEEEECTTCTTEEEEEECTTT--
T ss_pred cceeeeeecCCCCeeeeeeccc-----cceEEeeccccccceeee---eecccCCceeeeeeCCCcccEEEEEeecCC--
Confidence 1112223334556666666543 3667776654311 111 00001111 112222 3445544432222
Q ss_pred cccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 202 IMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 202 ~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
..+..||..+..-..... .............++.+++.+|... +.|.+||..+.+ .
T Consensus 301 --------~~I~iwd~~t~~~~~~~~---~~~~v~~~~~~~~~~~lv~~sg~~d-----------~~I~iwd~~~~~--~ 356 (420)
T 4gga_A 301 --------RHIRIWNVCSGACLSAVD---AHSQVCSILWSPHYKELISGHGFAQ-----------NQLVIWKYPTMA--K 356 (420)
T ss_dssp --------CEEEEEETTTTEEEEEEE---CSSCEEEEEEETTTTEEEEEECTTT-----------CCEEEEETTTCC--E
T ss_pred --------CEEEEEeCCccccceeec---cccceeeeeecCCCCeEEEEEecCC-----------CEEEEEECCCCc--E
Confidence 234566777765443331 1111111112224556666656443 458889987654 2
Q ss_pred cccCCCCCCcccceEEEEECCEEEEEccCCCC
Q 010770 282 LPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (501)
Q Consensus 282 v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 313 (501)
+..... -..+....+..-++.+++.||.++.
T Consensus 357 v~~l~g-H~~~V~~l~~spdg~~l~S~s~D~t 387 (420)
T 4gga_A 357 VAELKG-HTSRVLSLTMSPDGATVASAAADET 387 (420)
T ss_dssp EEEECC-CSSCEEEEEECTTSSCEEEEETTTE
T ss_pred EEEEcC-CCCCEEEEEEcCCCCEEEEEecCCe
Confidence 222110 0122222222225677788886653
No 62
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=95.86 E-value=0.72 Score=49.53 Aligned_cols=212 Identities=12% Similarity=-0.007 Sum_probs=106.7
Q ss_pred ccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCC
Q 010770 43 RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (501)
Q Consensus 43 ~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~ 122 (501)
.....+|+.+...+.|..+........+ ........+.+-+++.++++...++.....++++|+.+++......
T Consensus 95 ~~~~~l~~~~~~~~~~~~lld~~~l~~~---~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--- 168 (710)
T 2xdw_A 95 QNQRVLYVQDSLEGEARVFLDPNILSDD---GTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--- 168 (710)
T ss_dssp CSSCEEEEESSTTSCCEEEECGGGGCTT---SCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE---
T ss_pred ceEEEEEEEcCCCCCcEEEECHHHhccC---CCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc---
Confidence 3456788888877788765322110000 0011112222335665555544333333479999999999876532
Q ss_pred CCCcCCccEEEEEcCcEEEEEecCCCC-----------cccccEEEEECCCCceE--EcccCCCCCCCCcceeEEEe-CC
Q 010770 123 LPSPRDFAAASAIGNRKIVMYGGWDGK-----------KWLSDVYVLDTISLEWM--QLPVTGSVPPPRCGHTATMV-EK 188 (501)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~-----------~~~~~~~~yd~~t~~W~--~~~~~~~~p~~r~~~~~~~~-~~ 188 (501)
+... ..+.+...|++.++++..+.. .....++++++.+.+.. .+. . ....+......... ++
T Consensus 169 -~~~~-~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~-~-~~~~~~~~~~~~~SpDg 244 (710)
T 2xdw_A 169 -ERVK-FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCA-E-FPDEPKWMGGAELSDDG 244 (710)
T ss_dssp -EEEC-SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEE-C-CTTCTTCEEEEEECTTS
T ss_pred -cCcc-cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEe-c-cCCCCeEEEEEEEcCCC
Confidence 1111 233444456555555544332 22456899999887643 221 1 11112222223222 44
Q ss_pred -EEEEEcccCCCCCcccccccccccccccCCC------C--ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCC
Q 010770 189 -RLLIYGGRGGGGPIMGDLWALKGLIEEENET------P--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWL 259 (501)
Q Consensus 189 -~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t------~--~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~ 259 (501)
.|++....... .. +.++.+|..+ . .+..+... .... .......++.||+.+....
T Consensus 245 ~~l~~~~~~~~~--~~------~~l~~~d~~~~~~~~~~~~~~~~l~~~---~~~~-~~~~s~dg~~l~~~s~~~~---- 308 (710)
T 2xdw_A 245 RYVLLSIREGCD--PV------NRLWYCDLQQESNGITGILKWVKLIDN---FEGE-YDYVTNEGTVFTFKTNRHS---- 308 (710)
T ss_dssp CEEEEEEECSSS--SC------CEEEEEEGGGSSSSSCSSCCCEEEECS---SSSC-EEEEEEETTEEEEEECTTC----
T ss_pred CEEEEEEEccCC--Cc------cEEEEEECcccccccCCccceEEeeCC---CCcE-EEEEeccCCEEEEEECCCC----
Confidence 44444332211 11 3344456654 3 57777621 1111 2223335778888875432
Q ss_pred cccccccCeEEEEEcCCC---ceEEcccC
Q 010770 260 SRYDIYYNDTIILDRLSA---QWKRLPIG 285 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~---~W~~v~~~ 285 (501)
....++++|+.+. .|+.+...
T Consensus 309 -----~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 309 -----PNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp -----TTCEEEEEETTSCCGGGCEEEECC
T ss_pred -----CCCEEEEEeCCCCCcccceeccCC
Confidence 2367999998875 58887653
No 63
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=95.82 E-value=1.1 Score=43.76 Aligned_cols=220 Identities=7% Similarity=-0.108 Sum_probs=101.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++.+++.|+.+ ..+.+||.....-..+.. .. ..-.+++.. ++..++.|+.+ ..+.+|
T Consensus 118 ~~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~----------~~-~~v~~~~~~~~~~~l~~~~~d-----~~i~iw 176 (425)
T 1r5m_A 118 HDGNSIVTGVEN-----GELRLWNKTGALLNVLNF----------HR-APIVSVKWNKDGTHIISMDVE-----NVTILW 176 (425)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTSCEEEEECC----------CC-SCEEEEEECTTSSEEEEEETT-----CCEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEeCCCCeeeeccC----------CC-ccEEEEEECCCCCEEEEEecC-----CeEEEE
Confidence 445677777653 347888844433333321 11 112223332 45556666543 358889
Q ss_pred ECCCCeEEEEecCCCCC-----------CcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCC
Q 010770 108 DTDIWQWSELTSFGDLP-----------SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP 176 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p-----------~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 176 (501)
|..+.+..........+ ......+++...++. ++.|+.+ ..+.+||+.+.+-...- ...
T Consensus 177 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-----g~i~~~d~~~~~~~~~~---~~~- 246 (425)
T 1r5m_A 177 NVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDK-FVIPGPK-----GAIFVYQITEKTPTGKL---IGH- 246 (425)
T ss_dssp ETTTTEEEEEECCC---------------CCCBSCCEEEETTE-EEEECGG-----GCEEEEETTCSSCSEEE---CCC-
T ss_pred ECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCE-EEEEcCC-----CeEEEEEcCCCceeeee---ccC-
Confidence 99887655443211111 000023334444544 5566543 45889998876433221 101
Q ss_pred CCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe-CCEEEEEcCCC
Q 010770 177 PRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHG 254 (501)
Q Consensus 177 ~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~i~v~GG~~ 254 (501)
...-.+++.. ++.+++.|+.. ..+..||..+......- ..... .-.+++.. ++ +++.|+.+
T Consensus 247 ~~~i~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~---~~~~~-~i~~~~~~~~~-~l~~~~~d 309 (425)
T 1r5m_A 247 HGPISVLEFNDTNKLLLSASDD------------GTLRIWHGGNGNSQNCF---YGHSQ-SIVSASWVGDD-KVISCSMD 309 (425)
T ss_dssp SSCEEEEEEETTTTEEEEEETT------------SCEEEECSSSBSCSEEE---CCCSS-CEEEEEEETTT-EEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEcCC------------CEEEEEECCCCccceEe---cCCCc-cEEEEEECCCC-EEEEEeCC
Confidence 1111223333 45566666543 22445566554332221 01111 12233333 44 55666543
Q ss_pred CCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCC
Q 010770 255 TGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (501)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 312 (501)
..+.+||+.+..-....... .....+++.. ++.+++.|+.++
T Consensus 310 ------------~~i~i~d~~~~~~~~~~~~~----~~~i~~~~~s~~~~~l~~~~~dg 352 (425)
T 1r5m_A 310 ------------GSVRLWSLKQNTLLALSIVD----GVPIFAGRISQDGQKYAVAFMDG 352 (425)
T ss_dssp ------------SEEEEEETTTTEEEEEEECT----TCCEEEEEECTTSSEEEEEETTS
T ss_pred ------------CcEEEEECCCCcEeEecccC----CccEEEEEEcCCCCEEEEEECCC
Confidence 46889998776533322211 1111222222 466777777654
No 64
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=95.79 E-value=1.2 Score=41.19 Aligned_cols=220 Identities=11% Similarity=-0.010 Sum_probs=116.1
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCC
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (501)
++++...++.+|+.... ...+.+||+. +.+....... ....-++++.. ++.+|+.... .
T Consensus 18 ~~i~~d~~g~l~v~~~~-----~~~v~~~d~~-~~~~~~~~~~---------~~~~~~~i~~~~~g~l~v~~~~-----~ 77 (299)
T 2z2n_A 18 YGITVSDKGKVWITQHK-----ANMISCINLD-GKITEYPLPT---------PDAKVMCLTISSDGEVWFTENA-----A 77 (299)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-CCEEEEECSS---------TTCCEEEEEECTTSCEEEEETT-----T
T ss_pred cceEECCCCCEEEEecC-----CCcEEEEcCC-CCeEEecCCc---------ccCceeeEEECCCCCEEEeCCC-----C
Confidence 45555556788876431 2458999998 7776654210 11122333333 5678887432 2
Q ss_pred CcEEEEECCCCeEEEEecCCCCC-CcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcc
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLP-SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p-~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (501)
..+++||+. .+...+. .| ....-++++...++.+|+.... ...+++||+ +.+........ ....-
T Consensus 78 ~~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~d~-~g~~~~~~~~~---~~~~~ 143 (299)
T 2z2n_A 78 NKIGRITKK-GIIKEYT----LPNPDSAPYGITEGPNGDIWFTEMN-----GNRIGRITD-DGKIREYELPN---KGSYP 143 (299)
T ss_dssp TEEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSCEEEEETT-----TTEEEEECT-TCCEEEEECSS---TTCCE
T ss_pred CeEEEECCC-CcEEEEe----CCCcCCCceeeEECCCCCEEEEecC-----CceEEEECC-CCCEEEecCCC---CCCCC
Confidence 358889886 5555554 22 1222334444456788887543 245889998 66666553211 11222
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCC
Q 010770 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (501)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~ 258 (501)
..++.. ++++|+.... -..+.+||+ +.+...+..+.. ...-.+++. .++.+|+....
T Consensus 144 ~~i~~~~~g~l~v~~~~------------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~~~----- 202 (299)
T 2z2n_A 144 SFITLGSDNALWFTENQ------------NNAIGRITE-SGDITEFKIPTP---ASGPVGITKGNDDALWFVEII----- 202 (299)
T ss_dssp EEEEECTTSCEEEEETT------------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECTTSSEEEEETT-----
T ss_pred ceEEEcCCCCEEEEeCC------------CCEEEEEcC-CCcEEEeeCCCC---CCcceeEEECCCCCEEEEccC-----
Confidence 334443 5688885421 134566788 677766542211 111223444 34677775432
Q ss_pred CcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
.+.+.+||+ +.....+..... .....+++.. ++.+|+..
T Consensus 203 -------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~ 242 (299)
T 2z2n_A 203 -------GNKIGRITT-SGEITEFKIPTP---NARPHAITAGAGIDLWFTE 242 (299)
T ss_dssp -------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEE
T ss_pred -------CceEEEECC-CCcEEEEECCCC---CCCceeEEECCCCCEEEec
Confidence 256899999 777666432111 1122333333 46777764
No 65
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.73 E-value=0.63 Score=43.66 Aligned_cols=132 Identities=11% Similarity=0.009 Sum_probs=69.5
Q ss_pred cEEEEECCcEEEEEcccC--CCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-C-CEEEEEccccCC
Q 010770 23 HSAVNIGKSKVVVFGGLV--DKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRFGS 98 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~--~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~~~ 98 (501)
+..+...++.+|+..... .......+++||+.++++..+..... .. ....-++++.. + +++|+....
T Consensus 21 ~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~-----~~-~~~~~~~i~~~~~~g~l~v~~~~--- 91 (314)
T 1pjx_A 21 EGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEV-----NG-YGGIPAGCQCDRDANQLFVADMR--- 91 (314)
T ss_dssp EEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEE-----TT-EECCEEEEEECSSSSEEEEEETT---
T ss_pred cCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEeccc-----CC-CCCCCceEEEecCCCcEEEEECC---
Confidence 444444567888871100 01122469999999998876542000 00 01112333333 4 688887541
Q ss_pred CCCCcEEEEECCCCeEEEE-ecCCCCCCcCCccEEEEEcCcEEEEEecCCC----------CcccccEEEEECCCCceEE
Q 010770 99 RRLGDFWVLDTDIWQWSEL-TSFGDLPSPRDFAAASAIGNRKIVMYGGWDG----------KKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 99 ~~~~~~~~yd~~t~~W~~~-~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~----------~~~~~~~~~yd~~t~~W~~ 167 (501)
+.+++||+. ++...+ ...........-+.++...++.+|+...... ......+++||+. .+...
T Consensus 92 ---~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~ 166 (314)
T 1pjx_A 92 ---LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQ 166 (314)
T ss_dssp ---TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEE
T ss_pred ---CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEE
Confidence 268999998 777665 3211111112234455556678888654321 1123568999987 55554
Q ss_pred c
Q 010770 168 L 168 (501)
Q Consensus 168 ~ 168 (501)
+
T Consensus 167 ~ 167 (314)
T 1pjx_A 167 V 167 (314)
T ss_dssp E
T ss_pred e
Confidence 4
No 66
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=95.67 E-value=0.21 Score=46.01 Aligned_cols=212 Identities=8% Similarity=-0.046 Sum_probs=101.7
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCC-CcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDN-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t-~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
..+++.+++++ ...++++|+.+ ++...+... .........+..-+++.+++++.... ....+|.
T Consensus 50 spdg~~l~~~~------~~~i~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~-~~~~l~~ 114 (297)
T 2ojh_A 50 SPDGKYLLLNS------EGLLYRLSLAGDPSPEKVDTG--------FATICNNDHGISPDGALYAISDKVEF-GKSAIYL 114 (297)
T ss_dssp CTTSSEEEEEE------TTEEEEEESSSCCSCEECCCT--------TCCCBCSCCEECTTSSEEEEEECTTT-SSCEEEE
T ss_pred CCCCCEEEEEc------CCeEEEEeCCCCCCceEeccc--------cccccccceEECCCCCEEEEEEeCCC-CcceEEE
Confidence 34455555554 24699999998 776654321 11112222233335555555553221 3467999
Q ss_pred EECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEE
Q 010770 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (501)
++..+.....+.. . . ....++...++ .|++.++.++. ..+|.++..+.....+. ..+. . -..+..
T Consensus 115 ~~~~~~~~~~~~~---~-~--~~~~~~~spdg~~l~~~~~~~~~---~~l~~~~~~~~~~~~~~---~~~~-~-~~~~~~ 180 (297)
T 2ojh_A 115 LPSTGGTPRLMTK---N-L--PSYWHGWSPDGKSFTYCGIRDQV---FDIYSMDIDSGVETRLT---HGEG-R-NDGPDY 180 (297)
T ss_dssp EETTCCCCEECCS---S-S--SEEEEEECTTSSEEEEEEEETTE---EEEEEEETTTCCEEECC---CSSS-C-EEEEEE
T ss_pred EECCCCceEEeec---C-C--CccceEECCCCCEEEEEECCCCc---eEEEEEECCCCcceEcc---cCCC-c-cccceE
Confidence 9988877555542 1 1 12333333444 45545543321 35788888887776654 2111 1 122222
Q ss_pred e-CCE-EEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCccc
Q 010770 186 V-EKR-LLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRY 262 (501)
Q Consensus 186 ~-~~~-lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~ 262 (501)
. +++ |++.+..... ..++.+++.+.....+.. .. .....+.. -+++.+++++...... ...
T Consensus 181 s~dg~~l~~~~~~~~~----------~~i~~~~~~~~~~~~~~~---~~--~~~~~~~~s~dg~~l~~~~~~~~~~-~~~ 244 (297)
T 2ojh_A 181 SPDGRWIYFNSSRTGQ----------MQIWRVRVDGSSVERITD---SA--YGDWFPHPSPSGDKVVFVSYDADVF-DHP 244 (297)
T ss_dssp CTTSSEEEEEECTTSS----------CEEEEEETTSSCEEECCC---CS--EEEEEEEECTTSSEEEEEEEETTCC-SCC
T ss_pred CCCCCEEEEEecCCCC----------ccEEEECCCCCCcEEEec---CC--cccCCeEECCCCCEEEEEEcCCCCC-ccc
Confidence 2 444 4444432221 233444666666655541 11 11222222 3444444443322110 000
Q ss_pred ccccCeEEEEEcCCCceEEccc
Q 010770 263 DIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 263 ~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
......++++|+.+.....+..
T Consensus 245 ~~~~~~l~~~d~~~~~~~~~~~ 266 (297)
T 2ojh_A 245 RDLDVRVQLMDMDGGNVETLFD 266 (297)
T ss_dssp SSEEEEEEEEETTSCSCEEEEE
T ss_pred ccCceEEEEEecCCCCceeeec
Confidence 0022569999999887766543
No 67
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=95.58 E-value=1.6 Score=41.35 Aligned_cols=211 Identities=9% Similarity=-0.005 Sum_probs=104.2
Q ss_pred EEEEECC-cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCC
Q 010770 24 SAVNIGK-SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (501)
Q Consensus 24 ~~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~ 100 (501)
.++...+ +.+|+.++.+ ..++++|+.+++-......+.... +....+..-+.++.. ++.+|+.+...
T Consensus 93 ~~~~s~dg~~l~v~~~~~-----~~v~~~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~---- 162 (353)
T 3vgz_A 93 GATINNTTQTLWFGNTVN-----SAVTAIDAKTGEVKGRLVLDDRKR-TEEVRPLQPRELVADDATNTVYISGIGK---- 162 (353)
T ss_dssp SEEEETTTTEEEEEETTT-----TEEEEEETTTCCEEEEEESCCCCC-CSSCCCCEEEEEEEETTTTEEEEEEESS----
T ss_pred eEEECCCCCEEEEEecCC-----CEEEEEeCCCCeeEEEEecCCCcc-ccccCCCCCceEEECCCCCEEEEEecCC----
Confidence 3444333 3466665532 368999999886533222211000 000011112333333 45677776321
Q ss_pred CCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCc
Q 010770 101 LGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC 179 (501)
Q Consensus 101 ~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~ 179 (501)
...++++|+.+.+-....+ . .....+.++...++ .+|+... .+.+++||+.+.+-......+.......
T Consensus 163 ~~~i~~~d~~~~~~~~~~~---~-~~~~~~~~~~s~dg~~l~~~~~------~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 232 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQ---N-TGKMSTGLALDSEGKRLYTTNA------DGELITIDTADNKILSRKKLLDDGKEHF 232 (353)
T ss_dssp SCEEEEEETTTTEEEEEEC---C-CCTTCCCCEEETTTTEEEEECT------TSEEEEEETTTTEEEEEEECCCSSSCCC
T ss_pred CceEEEEcCCCCceEEEec---C-CCCccceEEECCCCCEEEEEcC------CCeEEEEECCCCeEEEEEEcCCCCCCcc
Confidence 2469999999887554432 1 11122334444443 5666533 2468899998876543321111111111
Q ss_pred ceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCC
Q 010770 180 GHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG 257 (501)
Q Consensus 180 ~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~ 257 (501)
...++.. ++.+|+..... ..+..||+.+.+....-.. +.+ ...+....++.+|+.+...
T Consensus 233 ~~~~~~s~dg~~l~~~~~~~------------~~v~~~d~~~~~~~~~~~~---~~~-~~~~~s~dg~~l~v~~~~~--- 293 (353)
T 3vgz_A 233 FINISLDTARQRAFITDSKA------------AEVLVVDTRNGNILAKVAA---PES-LAVLFNPARNEAYVTHRQA--- 293 (353)
T ss_dssp EEEEEEETTTTEEEEEESSS------------SEEEEEETTTCCEEEEEEC---SSC-CCEEEETTTTEEEEEETTT---
T ss_pred cceEEECCCCCEEEEEeCCC------------CEEEEEECCCCcEEEEEEc---CCC-ceEEECCCCCEEEEEECCC---
Confidence 1223333 45677764321 4456778887776543311 222 1112222345677765422
Q ss_pred CCcccccccCeEEEEEcCCCceEEc
Q 010770 258 WLSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
+.+.+||+.+.+....
T Consensus 294 ---------~~v~~~d~~~~~~~~~ 309 (353)
T 3vgz_A 294 ---------GKVSVIDAKSYKVVKT 309 (353)
T ss_dssp ---------TEEEEEETTTTEEEEE
T ss_pred ---------CeEEEEECCCCeEEEE
Confidence 5689999988765443
No 68
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=95.58 E-value=0.99 Score=44.72 Aligned_cols=108 Identities=8% Similarity=-0.006 Sum_probs=57.8
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++.+++.|+.++ .+.+||..++.....-. ..... -.+++. -++.+++.|+.++ .+.+|
T Consensus 118 p~~~~l~s~s~Dg-----~i~vwd~~~~~~~~~l~---------~h~~~-V~~v~~~~~~~~l~sgs~D~-----~i~iw 177 (410)
T 1vyh_C 118 PVFSVMVSASEDA-----TIKVWDYETGDFERTLK---------GHTDS-VQDISFDHSGKLLASCSADM-----TIKLW 177 (410)
T ss_dssp SSSSEEEEEESSS-----CEEEEETTTCCCCEEEC---------CCSSC-EEEEEECTTSSEEEEEETTS-----CCCEE
T ss_pred CCCCEEEEEeCCC-----eEEEEECCCCcEEEEEe---------ccCCc-EEEEEEcCCCCEEEEEeCCC-----eEEEE
Confidence 3456777777543 48889988775433210 11111 122222 2567777787654 35677
Q ss_pred ECCCCeEEEEecCCCCCCcC-CccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 108 DTDIWQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
|+.+.+-... +.... .-.+++...++..++.|+.++ .+.+||+.+..-.
T Consensus 178 d~~~~~~~~~-----~~~h~~~V~~v~~~p~~~~l~s~s~D~-----~i~~wd~~~~~~~ 227 (410)
T 1vyh_C 178 DFQGFECIRT-----MHGHDHNVSSVSIMPNGDHIVSASRDK-----TIKMWEVQTGYCV 227 (410)
T ss_dssp ETTSSCEEEC-----CCCCSSCEEEEEECSSSSEEEEEETTS-----EEEEEETTTCCEE
T ss_pred eCCCCceeEE-----EcCCCCCEEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEE
Confidence 8876543221 11111 122333334556777777653 4788898877643
No 69
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.50 E-value=1.2 Score=48.16 Aligned_cols=226 Identities=11% Similarity=0.063 Sum_probs=113.2
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++.|+|-. . .-+.+||+.++++........ . .......-++.+.. ++.|+|- ... .-+++|
T Consensus 382 ~~g~lWigt-~------~GL~~~~~~~~~~~~~~~~~~---~-~~~~~~~v~~i~~d~~g~lWig-T~~-----~Gl~~~ 444 (758)
T 3ott_A 382 KEQQLWIAT-D------GSINRYDYATRQFIHYNIVDN---T-GTYNTNWTYYIFEDTAGQLWIS-TCL-----GGIFVV 444 (758)
T ss_dssp TTSCEEEEE-T------TEEEEEETTTTEEEEEEEECC---C---CBSSSEEEEEECTTSEEEEE-ESS-----SCEEEE
T ss_pred CCCCEEEEe-C------CcHhhcCcCCCcEEEeecCCC---c-CCCCCceEEEEEEcCCCCEEEE-ECC-----CceEEE
Confidence 446677632 1 238999999999887653211 0 00011122333333 4678873 221 237778
Q ss_pred ECCC------CeEE---EEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCC
Q 010770 108 DTDI------WQWS---ELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (501)
Q Consensus 108 d~~t------~~W~---~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r 178 (501)
|+.+ ..+. .......++.. ...+.+...++.|+++||.. ..+++||+.+.+++.+... ..+...
T Consensus 445 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWi~~~t~-----~Gl~~~d~~~~~~~~~~~~-~~~~~~ 517 (758)
T 3ott_A 445 DKHKLMQSTSGQYIAEQNYSVHNGLSGM-FINQIIPDNEGNVWVLLYNN-----KGIDKINPRTREVTKLFAD-ELTGEK 517 (758)
T ss_dssp EHHHHHHCCSSEEECSEEECGGGTCSCS-CEEEEEECTTSCEEEEETTC-----SSEEEEETTTTEEEEECTT-TSCGGG
T ss_pred ccccccccCCcceecccccccccccccc-eeeeEEEcCCCCEEEEccCC-----CCcEEEeCCCCceEEecCC-CcCCCc
Confidence 7653 2232 11111122221 12333444567899877653 3599999999999887421 111111
Q ss_pred cceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCC
Q 010770 179 CGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGG 257 (501)
Q Consensus 179 ~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~ 257 (501)
.-.++... ++.|++-. . ..+.+||+.+++++.... ..+|.. .-.+++..++.|++...
T Consensus 518 ~~~~i~~d~~g~lWigt-~-------------~Gl~~~~~~~~~~~~~~~-~gl~~~-~i~~i~~~~g~lWi~t~----- 576 (758)
T 3ott_A 518 SPNYLLCDEDGLLWVGF-H-------------GGVMRINPKDESQQSISF-GSFSNN-EILSMTCVKNSIWVSTT----- 576 (758)
T ss_dssp CEEEEEECTTSCEEEEE-T-------------TEEEEECC--CCCCBCCC-CC---C-CEEEEEEETTEEEEEES-----
T ss_pred ccceEEECCCCCEEEEe-c-------------CceEEEecCCCceEEecc-cCCCcc-ceEEEEECCCCEEEECC-----
Confidence 11122222 56788632 1 234567888887765532 123332 22344445778887552
Q ss_pred CCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCC
Q 010770 258 WLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 312 (501)
+.+.+||+.+.+...... |...+..++....+.-+.|||.+|
T Consensus 577 ---------~Gl~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~G~l~fG~~~G 618 (758)
T 3ott_A 577 ---------NGLWIIDRKTMDARQQNM----TNKRFTSLLFDPKEDCVYLGGADG 618 (758)
T ss_dssp ---------SCEEEEETTTCCEEEC------CCCCCSEEEEETTTTEEEEECBSE
T ss_pred ---------CCeEEEcCCCceeEEecC----CCCceeeeEEECCCCcEEEecCCc
Confidence 348999999888765432 222333222222344455677665
No 70
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=95.49 E-value=3 Score=44.61 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=68.2
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCC---CCcceeEEEEeCCEEEEEccccCCCC
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGP---GPRAFHIAVAIDCHMFIFGGRFGSRR 100 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p---~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (501)
++.+ +.||+... ...++.+|..++ .|+.-..... ...+ ......+.++.++.||+...
T Consensus 74 ~v~~-g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~~~a~~~~~v~v~~~------ 136 (677)
T 1kb0_A 74 VVVD-GIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDR----STGFKGCCDVVNRGVALWKGKVYVGAW------ 136 (677)
T ss_dssp EEET-TEEEEECG------GGCEEEEETTTTEEEEEECCCCCG----GGGGGSSSCSCCCCCEEETTEEEEECT------
T ss_pred EEEC-CEEEEECC------CCeEEEEECCCCcEEEEEcCCCCc----cccccccccCCCCCceEECCEEEEEcC------
Confidence 3344 78998765 246999999876 6876432100 0000 00112234556888888632
Q ss_pred CCcEEEEECCCCe--EEEEecCCCCCCc-CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEcc
Q 010770 101 LGDFWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLP 169 (501)
Q Consensus 101 ~~~~~~yd~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~ 169 (501)
...++++|..+++ |+.-... +.+.. ....+.++. ++.+|+..+.........++.||..|.+ |+.-.
T Consensus 137 dg~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~~p~v~-~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 137 DGRLIALDAATGKEVWHQNTFE-GQKGSLTITGAPRVF-KGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp TSEEEEEETTTCCEEEEEETTT-TCCSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEES
T ss_pred CCEEEEEECCCCCEEeeecCCc-CcCcCcccccCcEEE-CCEEEEEecccccCCCCEEEEEECCCCcEEEEecc
Confidence 2469999998775 7664310 11111 111222333 5588775432222234569999998876 87654
No 71
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=95.45 E-value=1.4 Score=41.45 Aligned_cols=233 Identities=12% Similarity=-0.023 Sum_probs=112.9
Q ss_pred cCcEEEEEC-CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCC
Q 010770 21 SGHSAVNIG-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGS 98 (501)
Q Consensus 21 ~~h~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~ 98 (501)
.+-..+... ++.+|+..-. ...+++||+.++.-..... + .+. .+.+. -++++|+..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----------~-~~~-~~i~~~~dG~l~v~~----- 71 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIP-----AKKVCRWDSFTKQVQRVTM----------D-APV-SSVALRQSGGYVATI----- 71 (297)
T ss_dssp BEEEEEEETTTTEEEEEETT-----TTEEEEEETTTCCEEEEEC----------S-SCE-EEEEEBTTSSEEEEE-----
T ss_pred cccCCeEECCCCEEEEEECC-----CCEEEEEECCCCcEEEEeC----------C-Cce-EEEEECCCCCEEEEE-----
Confidence 333444333 4677777543 2468999999887654321 1 111 22333 256666643
Q ss_pred CCCCcEEEEECCCCeEEEEecCCC-CCCcCCccEEEEEcCcEEEEEecCCC------CcccccEEEEECCCCceEEcccC
Q 010770 99 RRLGDFWVLDTDIWQWSELTSFGD-LPSPRDFAAASAIGNRKIVMYGGWDG------KKWLSDVYVLDTISLEWMQLPVT 171 (501)
Q Consensus 99 ~~~~~~~~yd~~t~~W~~~~~~~~-~p~~r~~~~~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~t~~W~~~~~~ 171 (501)
.+.+++||+.+++++.+..... .+..+ ...+++..++.+|+-.-... ......++++|+.. +...+..
T Consensus 72 --~~~l~~~d~~~g~~~~~~~~~~~~~~~~-~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~- 146 (297)
T 3g4e_A 72 --GTKFCALNWKEQSAVVLATVDNDKKNNR-FNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD- 146 (297)
T ss_dssp --TTEEEEEETTTTEEEEEEECCTTCSSEE-EEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE-
T ss_pred --CCeEEEEECCCCcEEEEEecCCCCCCCC-CCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee-
Confidence 1468999999999887764211 11111 22333445678777431111 11234688888753 3333321
Q ss_pred CCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccC--CCCceEEeecCCCCCC-CceeeEEEE-eCC
Q 010770 172 GSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEEN--ETPGWTQLKLPGQAPS-SRCGHTITS-GGH 245 (501)
Q Consensus 172 ~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~--~t~~W~~~~~~g~~p~-~r~~~s~~~-~~~ 245 (501)
.. .....++.. ++.||+..... +.+.+||. .+............+. ...-.++++ .++
T Consensus 147 -~~---~~pngi~~spdg~~lyv~~~~~------------~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 147 -QV---DISNGLDWSLDHKIFYYIDSLS------------YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp -EE---SBEEEEEECTTSCEEEEEEGGG------------TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred -cc---ccccceEEcCCCCEEEEecCCC------------CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 11 111233333 34688775431 23444543 4554432110001111 112223444 456
Q ss_pred EEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEEC---CEEEEEccCCC
Q 010770 246 YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLG---SLYLLFGGFDG 312 (501)
Q Consensus 246 ~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~---~~iyv~GG~~~ 312 (501)
.||+..... +.|.+||+++.+....-.. |..+ -.+++..+ +.|||.....+
T Consensus 211 ~lwva~~~~------------~~v~~~d~~tG~~~~~i~~---p~~~-~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 211 KLWVACYNG------------GRVIRLDPVTGKRLQTVKL---PVDK-TTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp CEEEEEETT------------TEEEEECTTTCCEEEEEEC---SSSB-EEEEEEESGGGCEEEEEEBCTT
T ss_pred CEEEEEcCC------------CEEEEEcCCCceEEEEEEC---CCCC-ceEEEEeCCCCCEEEEEcCCcC
Confidence 788764211 4599999987665433222 2122 23333332 57888765443
No 72
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.44 E-value=1.2 Score=42.47 Aligned_cols=112 Identities=12% Similarity=0.028 Sum_probs=52.9
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
++..++.|+.+ ..+.+||+.+++....... ...-.+++. -++..++.++.+.......+.+||
T Consensus 85 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~-----------~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d 148 (369)
T 3zwl_B 85 FTKYCVTGSAD-----YSIKLWDVSNGQCVATWKS-----------PVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYE 148 (369)
T ss_dssp TSSEEEEEETT-----TEEEEEETTTCCEEEEEEC-----------SSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEeec-----------CCCeEEEEEccCCCEEEEecCCccCCCCEEEEEE
Confidence 34555555542 3588889887765443321 111122222 245555555543222234577777
Q ss_pred CCCCe----EEEEecCC-----CCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 109 TDIWQ----WSELTSFG-----DLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 109 ~~t~~----W~~~~~~~-----~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
..+.. +....... .........+++...++..++.|+.+ ..+.+||+.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~ 206 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-----GKISKYDVSN 206 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT-----SEEEEEETTT
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC-----CEEEEEECCC
Confidence 64332 22111000 00000022233333456677777654 3488999887
No 73
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.41 E-value=2.4 Score=42.12 Aligned_cols=210 Identities=12% Similarity=0.045 Sum_probs=99.8
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 125 (501)
..+.+||+.+++-...-.. ....-.++..++..++.|+.+ ..+.+||+.+.+-...-. .
T Consensus 219 g~i~~wd~~~~~~~~~~~~-----------~~~~v~~~~~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~-----~ 277 (445)
T 2ovr_B 219 ATLRVWDIETGQCLHVLMG-----------HVAAVRCVQYDGRRVVSGAYD-----FMVKVWDPETETCLHTLQ-----G 277 (445)
T ss_dssp SEEEEEESSSCCEEEEEEC-----------CSSCEEEEEECSSCEEEEETT-----SCEEEEEGGGTEEEEEEC-----C
T ss_pred CEEEEEECCCCcEEEEEcC-----------CcccEEEEEECCCEEEEEcCC-----CEEEEEECCCCcEeEEec-----C
Confidence 3477778776654332110 111122333466667777643 357889988775433221 1
Q ss_pred cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccc
Q 010770 126 PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGD 205 (501)
Q Consensus 126 ~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d 205 (501)
......++.+ ++..++.|+.++ .+.+||+.+.+-...- . ...........++..++.|+..
T Consensus 278 ~~~~v~~~~~-~~~~l~~~~~d~-----~i~i~d~~~~~~~~~~---~--~~~~~v~~~~~~~~~l~~~~~d-------- 338 (445)
T 2ovr_B 278 HTNRVYSLQF-DGIHVVSGSLDT-----SIRVWDVETGNCIHTL---T--GHQSLTSGMELKDNILVSGNAD-------- 338 (445)
T ss_dssp CSSCEEEEEE-CSSEEEEEETTS-----CEEEEETTTCCEEEEE---C--CCCSCEEEEEEETTEEEEEETT--------
T ss_pred CCCceEEEEE-CCCEEEEEeCCC-----eEEEEECCCCCEEEEE---c--CCcccEEEEEEeCCEEEEEeCC--------
Confidence 1112223334 446667777543 4889998877644322 1 1111122223345556666543
Q ss_pred cccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcc-c
Q 010770 206 LWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP-I 284 (501)
Q Consensus 206 ~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~-~ 284 (501)
..+..||+.+.+-...- .+.... .....++..++.+++.|+.+ ..+.+||+.+.+....- .
T Consensus 339 ----g~i~vwd~~~~~~~~~~-~~~~~~-~~~v~~~~~~~~~l~s~~~d------------g~v~iwd~~~~~~~~~~~~ 400 (445)
T 2ovr_B 339 ----STVKIWDIKTGQCLQTL-QGPNKH-QSAVTCLQFNKNFVITSSDD------------GTVKLWDLKTGEFIRNLVT 400 (445)
T ss_dssp ----SCEEEEETTTCCEEEEE-CSTTSC-SSCEEEEEECSSEEEEEETT------------SEEEEEETTTCCEEEEEEE
T ss_pred ----CeEEEEECCCCcEEEEE-ccCCCC-CCCEEEEEECCCEEEEEeCC------------CeEEEEECCCCceeeeeec
Confidence 23456677665433221 111111 11122223355666666643 46899999887654322 1
Q ss_pred CCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 285 GNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 285 ~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
....+..-...+++.. ++.+++.|+.++.
T Consensus 401 ~~~~~~~~~v~~~~~s~~~~~la~~~~dg~ 430 (445)
T 2ovr_B 401 LESGGSGGVVWRIRASNTKLVCAVGSRNGT 430 (445)
T ss_dssp CTTGGGTCEEEEEEECSSEEEEEEECSSSS
T ss_pred cccCCCCceEEEEEecCCEEEEEEcccCCC
Confidence 1000111112223333 4556677777664
No 74
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.41 E-value=2 Score=41.19 Aligned_cols=216 Identities=12% Similarity=0.103 Sum_probs=106.8
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEE-EeCCEEEEEccccCCCCCCcEEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAV-AIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~-~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
++.+|+.|.. ..+++-.-.-.+|+.+.... ..| -..+.++ .-++.+|+.|.. ..+++-.
T Consensus 89 ~~~~~~~g~~------g~i~~S~DgG~tW~~~~~~~------~~~--~~~~~i~~~~~~~~~~~~~~------g~v~~S~ 148 (327)
T 2xbg_A 89 GNEGWIVGEP------PIMLHTTDGGQSWSQIPLDP------KLP--GSPRLIKALGNGSAEMITNV------GAIYRTK 148 (327)
T ss_dssp TTEEEEEEET------TEEEEESSTTSSCEECCCCT------TCS--SCEEEEEEEETTEEEEEETT------CCEEEES
T ss_pred CCeEEEEECC------CeEEEECCCCCCceECcccc------CCC--CCeEEEEEECCCCEEEEeCC------ccEEEEc
Confidence 3678887531 12444222346899875321 011 1123333 346788887641 1243322
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC-CCceEEcccCCCCCCCCcceeEEEe-
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
=.-.+|+.+.. +.....++++...++.+|++|-. ..+++-+-. -.+|+.+.. +.....+.++..
T Consensus 149 DgG~tW~~~~~----~~~~~~~~~~~~~~~~~~~~g~~------G~~~~S~d~gG~tW~~~~~----~~~~~~~~~~~~~ 214 (327)
T 2xbg_A 149 DSGKNWQALVQ----EAIGVMRNLNRSPSGEYVAVSSR------GSFYSTWEPGQTAWEPHNR----TTSRRLHNMGFTP 214 (327)
T ss_dssp STTSSEEEEEC----SCCCCEEEEEECTTSCEEEEETT------SSEEEEECTTCSSCEEEEC----CSSSCEEEEEECT
T ss_pred CCCCCCEEeec----CCCcceEEEEEcCCCcEEEEECC------CcEEEEeCCCCCceeECCC----CCCCccceeEECC
Confidence 23467999873 22233455555556677776531 235544333 578998852 223333444433
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccC-CCCceEEeecCCCCCCCceeeEEEEe-CCEEEEEcCCCCCCCCccccc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEEN-ETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDI 264 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~-~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~i~v~GG~~~~~~~~~~~~ 264 (501)
++.+|+.+.. + .+...+. ...+|+.+..+ .++.....++++.. ++.+|+.|+..
T Consensus 215 ~g~~~~~~~~---G----------~~~~s~~D~G~tW~~~~~~-~~~~~~~~~~v~~~~~~~~~~~g~~g---------- 270 (327)
T 2xbg_A 215 DGRLWMIVNG---G----------KIAFSDPDNSENWGELLSP-LRRNSVGFLDLAYRTPNEVWLAGGAG---------- 270 (327)
T ss_dssp TSCEEEEETT---T----------EEEEEETTEEEEECCCBCT-TSSCCSCEEEEEESSSSCEEEEESTT----------
T ss_pred CCCEEEEeCC---c----------eEEEecCCCCCeeEeccCC-cccCCcceEEEEecCCCEEEEEeCCC----------
Confidence 5678877632 1 0111211 25678877521 12222223344443 56788887632
Q ss_pred ccCeEEEEEcCCCceEEcccCCCCCCcccceEEEE-ECCEEEEEc
Q 010770 265 YYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFG 308 (501)
Q Consensus 265 ~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~-~~~~iyv~G 308 (501)
.+++-.-...+|+.+...... +...+.++. -++.+++.|
T Consensus 271 ---~i~~S~DgG~tW~~~~~~~~~--~~~~~~v~~~~~~~~~~~G 310 (327)
T 2xbg_A 271 ---ALLCSQDGGQTWQQDVDVKKV--PSNFYKILFFSPDQGFILG 310 (327)
T ss_dssp ---CEEEESSTTSSCEECGGGTTS--SSCCCEEEEEETTEEEEEC
T ss_pred ---eEEEeCCCCcccEEcCccCCC--CCCeEEEEEECCCceEEEc
Confidence 244333346799998753211 222244444 356666555
No 75
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=95.32 E-value=1.9 Score=40.88 Aligned_cols=128 Identities=8% Similarity=-0.031 Sum_probs=71.5
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (501)
..+...++.+|+.+... ..+++||+.+++...+... + ...-++++.. ++++|+.+.... ....
T Consensus 49 ~~~~~~~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~---------~-~~~~~~i~~~~dg~l~v~~~~~~-~~~~ 112 (333)
T 2dg1_A 49 GLNFDRQGQLFLLDVFE-----GNIFKINPETKEIKRPFVS---------H-KANPAAIKIHKDGRLFVCYLGDF-KSTG 112 (333)
T ss_dssp EEEECTTSCEEEEETTT-----CEEEEECTTTCCEEEEEEC---------S-SSSEEEEEECTTSCEEEEECTTS-SSCC
T ss_pred CcEECCCCCEEEEECCC-----CEEEEEeCCCCcEEEEeeC---------C-CCCcceEEECCCCcEEEEeCCCC-CCCc
Confidence 33444556788776532 3689999999888765421 1 1122333333 567887753221 1224
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCC-CCcccccEEEEECCCCceEEcc
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWD-GKKWLSDVYVLDTISLEWMQLP 169 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~-~~~~~~~~~~yd~~t~~W~~~~ 169 (501)
.+++||+.+.....+.. .......-..++...++.+|+..... .......++++|+.+.+...+.
T Consensus 113 ~i~~~d~~~~~~~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 178 (333)
T 2dg1_A 113 GIFAATENGDNLQDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPII 178 (333)
T ss_dssp EEEEECTTSCSCEEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEE
T ss_pred eEEEEeCCCCEEEEEEc--cCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEee
Confidence 69999998887654322 11122222334444567888754321 1112356899998887766553
No 76
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=95.29 E-value=0.93 Score=49.03 Aligned_cols=107 Identities=9% Similarity=-0.033 Sum_probs=59.2
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++..+++|+.+ ..+.+||..++.....-.. ........+..-++..++.|+.+ ..+.+||
T Consensus 23 p~~~~la~~~~~-----g~v~iwd~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~ 83 (814)
T 3mkq_A 23 PTEPWVLTTLYS-----GRVEIWNYETQVEVRSIQV---------TETPVRAGKFIARKNWIIVGSDD-----FRIRVFN 83 (814)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTTEEEEEEEC---------CSSCEEEEEEEGGGTEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCceEEEEec---------CCCcEEEEEEeCCCCEEEEEeCC-----CeEEEEE
Confidence 445666666642 3588999988765442211 11112222233355667777643 4688999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
..+++....-. . ....-.+++...++..++.|+.+ ..+.+||+.++
T Consensus 84 ~~~~~~~~~~~---~-~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~~~~~ 129 (814)
T 3mkq_A 84 YNTGEKVVDFE---A-HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENN 129 (814)
T ss_dssp TTTCCEEEEEE---C-CSSCEEEEEECSSSSEEEEEETT-----SEEEEEEGGGT
T ss_pred CCCCcEEEEEe---c-CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEECCCC
Confidence 98887654332 1 11112333444555666677654 34788888765
No 77
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=95.28 E-value=0.51 Score=49.10 Aligned_cols=152 Identities=13% Similarity=0.152 Sum_probs=75.7
Q ss_pred CcEEEEECCCCeEEEEecCCCC--------CCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceEEcccCC
Q 010770 102 GDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG 172 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~--------p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~ 172 (501)
+.+.++|..+.+-...-+...+ |.++. .+++... ++.+|+.... ...++.+|..+.+-..+.
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v-~~i~~s~~~~~~~vs~~~-----~g~i~vvd~~~~~~l~~~--- 318 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRV-AAIIASHEHPEFIVNVKE-----TGKVLLVNYKDIDNLTVT--- 318 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCE-EEEEECSSSSEEEEEETT-----TTEEEEEECTTSSSCEEE---
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCce-EEEEECCCCCEEEEEECC-----CCeEEEEEecCCCcceeE---
Confidence 4578889888765443321111 12221 2222222 3355554432 346888998765422211
Q ss_pred CCCCCCcceeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe-CCEEEE
Q 010770 173 SVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLL 249 (501)
Q Consensus 173 ~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~i~v 249 (501)
.++..+.-+.++.. ++ .+|+.+... +.+.++|..+++-...-..+..|.+..+...+.- ++.+|+
T Consensus 319 ~i~~~~~~~~~~~spdg~~l~va~~~~------------~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~ 386 (543)
T 1nir_A 319 SIGAAPFLHDGGWDSSHRYFMTAANNS------------NKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWS 386 (543)
T ss_dssp EEECCSSCCCEEECTTSCEEEEEEGGG------------TEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEE
T ss_pred EeccCcCccCceECCCCCEEEEEecCC------------CeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEE
Confidence 11223333444444 34 455544221 4455678888876554333444544333333322 367777
Q ss_pred EcCCCCCCCCcccccccCeEEEEEcCCC-----ceEEcccC
Q 010770 250 FGGHGTGGWLSRYDIYYNDTIILDRLSA-----QWKRLPIG 285 (501)
Q Consensus 250 ~GG~~~~~~~~~~~~~~~~v~~yd~~~~-----~W~~v~~~ 285 (501)
.+.... +.|-++|..+. .|+.+...
T Consensus 387 s~~~~d-----------~~V~v~d~~~~~~~~~~~~~v~~l 416 (543)
T 1nir_A 387 TSHLGD-----------GSISLIGTDPKNHPQYAWKKVAEL 416 (543)
T ss_dssp EEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred eccCCC-----------ceEEEEEeCCCCCchhcCeEEEEE
Confidence 764332 45788887762 37766554
No 78
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=95.27 E-value=1 Score=48.19 Aligned_cols=232 Identities=10% Similarity=0.008 Sum_probs=114.7
Q ss_pred ccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCC
Q 010770 43 RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (501)
Q Consensus 43 ~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~ 122 (501)
+....+|+.+...+.|..+........+ ..........+-+++.++|.-..++.....++++|+.+++..... .
T Consensus 91 ~~~~~l~~~~~~~~~~~~l~d~~~~a~~---~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~---~ 164 (695)
T 2bkl_A 91 KEKAILYWRQGESGQEKVLLDPNGWSKD---GTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD---V 164 (695)
T ss_dssp CSSCEEEEEESTTSCCEEEECGGGSSSS---SCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC---C
T ss_pred CeEEEEEEEcCCCCCcEEEEchHHhccC---CCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc---c
Confidence 3456789999888888887643210000 010111222223566555544333334468999999998753111 1
Q ss_pred CCCcCCccEEEEEcCcEEEEEecCCCC--------cccccEEEEECCCCceE--EcccCCCCCC-CCcceeEEEe-CCEE
Q 010770 123 LPSPRDFAAASAIGNRKIVMYGGWDGK--------KWLSDVYVLDTISLEWM--QLPVTGSVPP-PRCGHTATMV-EKRL 190 (501)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~--------~~~~~~~~yd~~t~~W~--~~~~~~~~p~-~r~~~~~~~~-~~~l 190 (501)
.+... ....+...|++.++++..+.. .....++++++.+..-. .+. ..+. +....+.... +++.
T Consensus 165 ~~~~~-~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~---~~~~~~~~~~~~~~SpDG~~ 240 (695)
T 2bkl_A 165 IEGGK-YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVH---ERTGDPTTFLQSDLSRDGKY 240 (695)
T ss_dssp BSCCT-TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEE---CCCCCTTCEEEEEECTTSCC
T ss_pred cCccc-ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEE---ecCCCCEEEEEEEECCCCCE
Confidence 22221 134455567777777665443 23456999999887632 222 1111 1222222222 4444
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEE
Q 010770 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (501)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (501)
.++...... .. +.++.+|..+..|..+... ..... ..+..++.+|+....+. ....++
T Consensus 241 l~~~~~~~~--~~------~~l~~~~~~~~~~~~l~~~---~~~~~--~~~~~~g~l~~~s~~~~---------~~~~l~ 298 (695)
T 2bkl_A 241 LFVYILRGW--SE------NDVYWKRPGEKDFRLLVKG---VGAKY--EVHAWKDRFYVLTDEGA---------PRQRVF 298 (695)
T ss_dssp EEEEEEETT--TE------EEEEEECTTCSSCEEEEEC---SSCCE--EEEEETTEEEEEECTTC---------TTCEEE
T ss_pred EEEEEeCCC--Cc------eEEEEEcCCCCceEEeecC---CCceE--EEEecCCcEEEEECCCC---------CCCEEE
Confidence 444332221 11 2344447777788888632 11111 22224555666543321 236799
Q ss_pred EEEcCCCc---eEEcccCCCCCCcccceEEEEECCEEEEEcc
Q 010770 271 ILDRLSAQ---WKRLPIGNEPPPARAYHSMTCLGSLYLLFGG 309 (501)
Q Consensus 271 ~yd~~~~~---W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG 309 (501)
++|+.+.. |..+..... ...-..+...++++++...
T Consensus 299 ~~d~~~~~~~~~~~l~~~~~---~~~l~~~~~~~~~lv~~~~ 337 (695)
T 2bkl_A 299 EVDPAKPARASWKEIVPEDS---SASLLSVSIVGGHLSLEYL 337 (695)
T ss_dssp EEBTTBCSGGGCEEEECCCS---SCEEEEEEEETTEEEEEEE
T ss_pred EEeCCCCCccCCeEEecCCC---CCeEEEEEEECCEEEEEEE
Confidence 99987654 887765321 1111223333666665544
No 79
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=95.21 E-value=1.2 Score=42.50 Aligned_cols=97 Identities=10% Similarity=-0.030 Sum_probs=51.9
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCc
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSP 126 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~ 126 (501)
.+|.+|..++++..+..... ...| ...+..-+++||+.+... ....+++||+.+++++.+... ....
T Consensus 19 ~v~~~d~~tg~~~~~~~~~~------~~~p--~~~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~--~~~~ 85 (347)
T 3hfq_A 19 YQGTLDTTAKTLTNDGLLAA------TQNP--TYLALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTV--VAPG 85 (347)
T ss_dssp EEEEEETTTTEEEEEEEEEE------CSCC--CCEEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEE--EEES
T ss_pred EEEEEcCCCCeEEEeeeeec------cCCc--ceEEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeee--ecCC
Confidence 47788888888877553321 1111 122333366777765421 124689999988887766531 0011
Q ss_pred CCccEEEEEcCc-EEEEEecCCCCcccccEEEEECC
Q 010770 127 RDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 127 r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
..-..++...++ .||+.+.. ...+.+||+.
T Consensus 86 ~~p~~~a~spdg~~l~~~~~~-----~~~v~v~~~~ 116 (347)
T 3hfq_A 86 TPPAYVAVDEARQLVYSANYH-----KGTAEVMKIA 116 (347)
T ss_dssp CCCSEEEEETTTTEEEEEETT-----TTEEEEEEEC
T ss_pred CCCEEEEECCCCCEEEEEeCC-----CCEEEEEEeC
Confidence 122334444555 46665422 2347777774
No 80
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.18 E-value=1.2 Score=47.54 Aligned_cols=159 Identities=11% Similarity=-0.048 Sum_probs=80.1
Q ss_pred CcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC-ceEEcccCCCC-CCCCc
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL-EWMQLPVTGSV-PPPRC 179 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~-p~~r~ 179 (501)
..++++|+.+.+-..+.. ..........++...|++.++++..+.......++.+|+.+. ....+...... .....
T Consensus 235 ~~l~~~d~~~~~~~~~~~--~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQT--GEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp EEEEEEETTTTEEEECCC--CSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred eEEEEEECCCCceEeecc--CCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 569999999987665542 011111222333445666555555444334557999999998 67665421110 00001
Q ss_pred ceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCC
Q 010770 180 GHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGT 255 (501)
Q Consensus 180 ~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~ 255 (501)
......- ++++++.+...+ ...++.+|........+.. ....... ..+. .++.|++.+....
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g----------~~~l~~~~~~~~~~~~l~~---~~~~v~~-~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDG----------WNHLYLYDTTGRLIRQVTK---GEWEVTN-FAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTS----------SCEEEEEETTSCEEEECCC---SSSCEEE-EEEECTTSSEEEEEESSSC
T ss_pred CCceeecCCCCEEEEEEccCC----------ccEEEEEECCCCEEEecCC---CCeEEEe-eeEEcCCCCEEEEEecCCC
Confidence 1112222 567555554322 1334455666666666641 1111111 1222 2345666554322
Q ss_pred CCCCcccccccCeEEEEEcCCCceEEccc
Q 010770 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
. ....+|.+|..+.....+..
T Consensus 379 ~--------~~~~l~~~d~~~~~~~~l~~ 399 (706)
T 2z3z_A 379 P--------LERHFYCIDIKGGKTKDLTP 399 (706)
T ss_dssp T--------TCBEEEEEETTCCCCEESCC
T ss_pred C--------ceEEEEEEEcCCCCceeccC
Confidence 1 23478999998887777653
No 81
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.17 E-value=0.16 Score=49.46 Aligned_cols=111 Identities=11% Similarity=0.038 Sum_probs=53.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++.+++.|+.+ ..+.+||+.++.|..+..... .... -.+++.. ++..++.|+.+ ..+.+|
T Consensus 21 ~~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~~~~-------h~~~-v~~~~~s~~~~~l~s~s~d-----~~v~vw 82 (377)
T 3dwl_C 21 SQRTEFVTTTAT-----NQVELYEQDGNGWKHARTFSD-------HDKI-VTCVDWAPKSNRIVTCSQD-----RNAYVY 82 (377)
T ss_dssp SSSSEEECCCSS-----SCBCEEEEETTEEEECCCBCC-------CSSC-EEEEEECTTTCCEEEEETT-----SSEEEC
T ss_pred CCCCEEEEecCC-----CEEEEEEccCCceEEEEEEec-------CCce-EEEEEEeCCCCEEEEEeCC-----CeEEEE
Confidence 345677777653 357788888888877654311 1111 1222222 45677777644 358888
Q ss_pred ECCCCe-EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 108 DTDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 108 d~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
|..+.. |...... ......-.+++...++.+++.|+.++ .+.+||..+.+
T Consensus 83 d~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~ 133 (377)
T 3dwl_C 83 EKRPDGTWKQTLVL--LRLNRAATFVRWSPNEDKFAVGSGAR-----VISVCYFEQEN 133 (377)
T ss_dssp ------CCCCEEEC--CCCSSCEEEEECCTTSSCCEEEESSS-----CEEECCC----
T ss_pred EcCCCCceeeeeEe--cccCCceEEEEECCCCCEEEEEecCC-----eEEEEEECCcc
Confidence 888776 4433321 11112222333334567777777644 37777777664
No 82
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=95.14 E-value=1.4 Score=42.50 Aligned_cols=177 Identities=11% Similarity=0.046 Sum_probs=85.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+++.++.|+.++ .+.++|+.+++-...-. .... .-.+++...++ .+++.|+.++ .+.+||+.+.+
T Consensus 138 dg~~l~sgs~d~-----~i~iwd~~~~~~~~~~~---~h~~-~V~~~~~~~~~~~~l~s~s~D~-----~v~iwd~~~~~ 203 (344)
T 4gqb_B 138 SGTQAVSGSKDI-----CIKVWDLAQQVVLSSYR---AHAA-QVTCVAASPHKDSVFLSCSEDN-----RILLWDTRCPK 203 (344)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS-CEEEEEECSSCTTEEEEEETTS-----CEEEEETTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CcCC-ceEEEEecCCCCCceeeecccc-----ccccccccccc
Confidence 567777776543 58889998876443321 1111 11222232333 5777777654 37889988776
Q ss_pred eEEcccCCCCCCCCcc-eeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceE-EeecCCCCCCCceeeEE
Q 010770 165 WMQLPVTGSVPPPRCG-HTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-QLKLPGQAPSSRCGHTI 240 (501)
Q Consensus 165 W~~~~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~-~~~~~g~~p~~r~~~s~ 240 (501)
-...- ........ .+++.. ++++++.|+..+ .+..||+.+.+-. .+. + . ...-.++
T Consensus 204 ~~~~~---~~~~~~~~~~~~~~~p~~~~~l~sg~~dg------------~v~~wd~~~~~~~~~~~--~-h--~~~v~~v 263 (344)
T 4gqb_B 204 PASQI---GCSAPGYLPTSLAWHPQQSEVFVFGDENG------------TVSLVDTKSTSCVLSSA--V-H--SQCVTGL 263 (344)
T ss_dssp CEEEC---C----CCCEEEEEECSSCTTEEEEEETTS------------EEEEEESCC--CCEEEE--C-C--SSCEEEE
T ss_pred eeeee---ecceeeccceeeeecCCCCcceEEeccCC------------cEEEEECCCCcEEEEEc--C-C--CCCEEEE
Confidence 44321 11111111 122222 456777776532 3445666654321 121 0 0 1111223
Q ss_pred EEe--CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE--CCEEEEEccCCCC
Q 010770 241 TSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL--GSLYLLFGGFDGK 313 (501)
Q Consensus 241 ~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 313 (501)
+.. +..+++.|+.+ ..|.+||..+.+-..+... ...-.+++.. +..+++.||.++.
T Consensus 264 ~fsp~g~~~lasgs~D------------~~i~vwd~~~~~~~~~~~H-----~~~V~~v~~sp~~~~llas~s~D~~ 323 (344)
T 4gqb_B 264 VFSPHSVPFLASLSED------------CSLAVLDSSLSELFRSQAH-----RDFVRDATWSPLNHSLLTTVGWDHQ 323 (344)
T ss_dssp EECSSSSCCEEEEETT------------SCEEEECTTCCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EEccCCCeEEEEEeCC------------CeEEEEECCCCcEEEEcCC-----CCCEEEEEEeCCCCeEEEEEcCCCe
Confidence 332 33566666543 3578889887754333221 1122233332 4457777887764
No 83
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=95.12 E-value=0.89 Score=44.13 Aligned_cols=178 Identities=15% Similarity=0.035 Sum_probs=86.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcC-cEEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+++.++.|+.++ .+.++|..+++-...-. .... .-.+++...+ ..+++.||.++ .+.+||+.+.+
T Consensus 150 dg~~l~sgs~dg-----~v~iwd~~~~~~~~~~~---~h~~-~v~~v~~s~~~~~~~~s~~~dg-----~v~~wd~~~~~ 215 (357)
T 4g56_B 150 DGTQAVSGGKDF-----SVKVWDLSQKAVLKSYN---AHSS-EVNCVAACPGKDTIFLSCGEDG-----RILLWDTRKPK 215 (357)
T ss_dssp SSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCSS-CEEEEEECTTCSSCEEEEETTS-----CEEECCTTSSS
T ss_pred CCCEEEEEeCCC-----eEEEEECCCCcEEEEEc---CCCC-CEEEEEEccCCCceeeeeccCC-----ceEEEECCCCc
Confidence 566777776543 48889998886544321 1111 1122233233 25677777654 37788887765
Q ss_pred eEEcccCCCCCCCCcce-eEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEE
Q 010770 165 WMQLPVTGSVPPPRCGH-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (501)
Q Consensus 165 W~~~~~~~~~p~~r~~~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~ 241 (501)
-.... ......... +++.. ++.+++.|+... .+..||+.+.+-...- ...... -.+++
T Consensus 216 ~~~~~---~~~~~~~~v~~v~~sp~~~~~la~g~~d~------------~i~~wd~~~~~~~~~~---~~~~~~-v~~l~ 276 (357)
T 4g56_B 216 PATRI---DFCASDTIPTSVTWHPEKDDTFACGDETG------------NVSLVNIKNPDSAQTS---AVHSQN-ITGLA 276 (357)
T ss_dssp CBCBC---CCTTCCSCEEEEEECTTSTTEEEEEESSS------------CEEEEESSCGGGCEEE---CCCSSC-EEEEE
T ss_pred eeeee---eeccccccccchhhhhcccceEEEeeccc------------ceeEEECCCCcEeEEE---ecccee-EEEEE
Confidence 33321 111111112 22222 356777776532 2345566554322111 011111 11233
Q ss_pred E--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEE--ECCEEEEEccCCCC
Q 010770 242 S--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC--LGSLYLLFGGFDGK 313 (501)
Q Consensus 242 ~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~ 313 (501)
. .+..+++.|+.+ ..|.+||..+.+-...... ...-.+++. .++.+++.||.++.
T Consensus 277 ~sp~~~~~lasgs~D------------~~i~iwd~~~~~~~~~~~H-----~~~V~~vafsP~d~~~l~s~s~Dg~ 335 (357)
T 4g56_B 277 YSYHSSPFLASISED------------CTVAVLDADFSEVFRDLSH-----RDFVTGVAWSPLDHSKFTTVGWDHK 335 (357)
T ss_dssp ECSSSSCCEEEEETT------------SCEEEECTTSCEEEEECCC-----SSCEEEEEECSSSTTEEEEEETTSC
T ss_pred EcCCCCCEEEEEeCC------------CEEEEEECCCCcEeEECCC-----CCCEEEEEEeCCCCCEEEEEcCCCe
Confidence 3 233566666543 3578889887754433211 111223333 35778888887764
No 84
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=95.11 E-value=0.75 Score=48.66 Aligned_cols=198 Identities=10% Similarity=-0.044 Sum_probs=105.7
Q ss_pred CCceEEEEcCC------CcEEece-ecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCC-C--CCCcEEEEECC-CC-
Q 010770 45 LSDVVVYDIDN------KLWFQPE-CTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS-R--RLGDFWVLDTD-IW- 112 (501)
Q Consensus 45 ~~~v~~yd~~t------~~W~~l~-~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~-~--~~~~~~~yd~~-t~- 112 (501)
...++++|+.+ +....+. .. + ......+.+-+++..++...... . ...+++++|+. ++
T Consensus 160 ~~~i~~~~~~~~~~~~~~~~~~l~~~~---------~-~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~ 229 (662)
T 3azo_A 160 RRFLAAVPLDGSAAADRSAVRELSDDA---------H-RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR 229 (662)
T ss_dssp EEEEEEEETTSTTTTCGGGSEESSCSC---------S-SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC
T ss_pred eeEEEEEECCCCccccCCceeEEEecC---------C-CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc
Confidence 36799999988 6655543 11 0 11112223335544444443321 1 13579999998 56
Q ss_pred --eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCC-CCCCCCc---ceeEEEe
Q 010770 113 --QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTG-SVPPPRC---GHTATMV 186 (501)
Q Consensus 113 --~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~-~~p~~r~---~~~~~~~ 186 (501)
+...+.. . ........+...|+++|+.+..++ ...++.+|+.+.++..+.... ....+.. ...++..
T Consensus 230 ~~~~~~l~~---~-~~~~~~~~~~spdg~l~~~~~~~~---~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~ 302 (662)
T 3azo_A 230 FADTRTLLG---G-PEEAIAQAEWAPDGSLIVATDRTG---WWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPL 302 (662)
T ss_dssp EEEEEEEEE---E-TTBCEEEEEECTTSCEEEEECTTS---SCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEEC
T ss_pred ccccEEeCC---C-CCceEcceEECCCCeEEEEECCCC---CeEEEEEECCCCceeecccccccccCccccccCceEeEe
Confidence 4555542 1 011223344445677777766543 246999999899998875311 0000100 1233333
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEE-EEeCCEEEEEcCCCCCCCCccccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTI-TSGGHYLLLFGGHGTGGWLSRYDI 264 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~-~~~~~~i~v~GG~~~~~~~~~~~~ 264 (501)
++++++.+.. +. ..++.+|..+...+.+... .. ...++ ...++.+++..+...
T Consensus 303 ~~~~~~~~~~~-~~----------~~l~~~d~~~~~~~~l~~~----~~-~~~~~~s~~~~~~~~~~~~~~--------- 357 (662)
T 3azo_A 303 ANGLIAVVHGK-GA----------AVLGILDPESGELVDAAGP----WT-EWAATLTVSGTRAVGVAASPR--------- 357 (662)
T ss_dssp TTSCEEEEEBS-SS----------CEEEEEETTTTEEEECCSS----CC-EEEEEEEEETTEEEEEEEETT---------
T ss_pred CCCEEEEEEEc-Cc----------cEEEEEECCCCcEEEecCC----CC-eEEEEEecCCCEEEEEEcCCC---------
Confidence 5677766654 21 2344557777777666521 11 11223 345666666554322
Q ss_pred ccCeEEEEEcCCCceEEccc
Q 010770 265 YYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 265 ~~~~v~~yd~~~~~W~~v~~ 284 (501)
....+|.+|+.+...+.+..
T Consensus 358 ~~~~i~~~d~~~g~~~~l~~ 377 (662)
T 3azo_A 358 TAYEVVELDTVTGRARTIGA 377 (662)
T ss_dssp EEEEEEEEETTTCCEEEEES
T ss_pred CCCEEEEEECCCCceEEeec
Confidence 23578999998888887754
No 85
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=95.11 E-value=2.4 Score=40.46 Aligned_cols=177 Identities=14% Similarity=0.062 Sum_probs=85.5
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++. ++.|+.+ ..+.++|+.+.+-...-. . ....-.+++...++.+++.|+.++ .+.+||+.+.+-
T Consensus 154 ~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~sg~~d~-----~v~~wd~~~~~~ 218 (340)
T 1got_B 154 DNQ-IVTSSGD-----TTCALWDIETGQQTTTFT---G-HTGDVMSLSLAPDTRLFVSGACDA-----SAKLWDVREGMC 218 (340)
T ss_dssp TTE-EEEEETT-----SCEEEEETTTTEEEEEEC---C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCSE
T ss_pred CCc-EEEEECC-----CcEEEEECCCCcEEEEEc---C-CCCceEEEEECCCCCEEEEEeCCC-----cEEEEECCCCee
Confidence 455 4455432 358889998876543321 1 111123344445667888888654 378889877654
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCcee-eEEEE-
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG-HTITS- 242 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~-~s~~~- 242 (501)
...- .+ . . ..-.+++.. ++..++.|+..+ .+..||+.+..-...- ..+..... .+++.
T Consensus 219 ~~~~-~~-h-~-~~v~~v~~~p~~~~l~s~s~d~------------~v~iwd~~~~~~~~~~---~~~~~~~~v~~~~~s 279 (340)
T 1got_B 219 RQTF-TG-H-E-SDINAICFFPNGNAFATGSDDA------------TCRLFDLRADQELMTY---SHDNIICGITSVSFS 279 (340)
T ss_dssp EEEE-CC-C-S-SCEEEEEECTTSSEEEEEETTS------------CEEEEETTTTEEEEEE---CCTTCCSCEEEEEEC
T ss_pred EEEE-cC-C-c-CCEEEEEEcCCCCEEEEEcCCC------------cEEEEECCCCcEEEEE---ccCCcccceEEEEEC
Confidence 3321 01 0 0 111122222 566777776532 3445676655432221 11111111 12222
Q ss_pred eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE-cccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 243 ~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
-++.+++.|+.+ ..+.+||..+..-.. +... . . .-.+++.. ++..++.||.++.
T Consensus 280 ~~g~~l~~g~~d------------~~i~vwd~~~~~~~~~~~~h-~---~-~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 280 KSGRLLLAGYDD------------FNCNVWDALKADRAGVLAGH-D---N-RVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTSSEEEEEETT------------SEEEEEETTTCCEEEEEECC-S---S-CEEEEEECTTSSCEEEEETTSC
T ss_pred CCCCEEEEECCC------------CeEEEEEcccCcEeeEeecC-C---C-cEEEEEEcCCCCEEEEEcCCcc
Confidence 345666766543 358889976654221 2111 0 1 11222222 4667777776653
No 86
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=95.04 E-value=0.89 Score=48.48 Aligned_cols=195 Identities=10% Similarity=-0.025 Sum_probs=97.7
Q ss_pred CCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEE-EEeCCEEEEEccccCCCCCCcEEEEECCCC-eEEEEecCCC
Q 010770 45 LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIA-VAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSFGD 122 (501)
Q Consensus 45 ~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~-~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~~~ 122 (501)
...++++|+.+++-..+... ......-... ..-+++.++++..+.......++.+|+.+. ....+.....
T Consensus 234 ~~~l~~~d~~~~~~~~~~~~--------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~ 305 (706)
T 2z3z_A 234 HVTVGIYHLATGKTVYLQTG--------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETD 305 (706)
T ss_dssp EEEEEEEETTTTEEEECCCC--------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEC
T ss_pred eeEEEEEECCCCceEeeccC--------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccC
Confidence 35699999998876554311 0111111222 223555444444443334457999999998 7766643111
Q ss_pred CCCcC-CccEEEEEc--CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCccee-EEEe-C-CEEEEEccc
Q 010770 123 LPSPR-DFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT-ATMV-E-KRLLIYGGR 196 (501)
Q Consensus 123 ~p~~r-~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~-~~~~-~-~~lyv~GG~ 196 (501)
+... ....++... ++++++.+..++ ...+|.+|........+. ...... .. ++.. + +.||+.+..
T Consensus 306 -~~~~~~~~~~~~sp~~dg~~l~~~~~~g---~~~l~~~~~~~~~~~~l~---~~~~~v--~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 306 -KHYVEPLHPLTFLPGSNNQFIWQSRRDG---WNHLYLYDTTGRLIRQVT---KGEWEV--TNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp -SSCCCCCSCCEECTTCSSEEEEEECTTS---SCEEEEEETTSCEEEECC---CSSSCE--EEEEEECTTSSEEEEEESS
T ss_pred -CCeECccCCceeecCCCCEEEEEEccCC---ccEEEEEECCCCEEEecC---CCCeEE--EeeeEEcCCCCEEEEEecC
Confidence 1000 012334445 677666665443 356888997777777664 111111 11 2222 3 456665543
Q ss_pred CCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcC
Q 010770 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL 275 (501)
Q Consensus 197 ~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 275 (501)
.... . ..++.+|..+...+.+.. ... .++++. -+++.+++...+.. ....++++|+.
T Consensus 377 ~~~~--~------~~l~~~d~~~~~~~~l~~-----~~~-~~~~~~spdg~~l~~~~~~~~--------~p~~i~l~d~~ 434 (706)
T 2z3z_A 377 ASPL--E------RHFYCIDIKGGKTKDLTP-----ESG-MHRTQLSPDGSAIIDIFQSPT--------VPRKVTVTNIG 434 (706)
T ss_dssp SCTT--C------BEEEEEETTCCCCEESCC-----SSS-EEEEEECTTSSEEEEEEECSS--------CSCEEEEEESS
T ss_pred CCCc--e------EEEEEEEcCCCCceeccC-----CCc-eEEEEECCCCCEEEEEecCCC--------CCcEEEEEECC
Confidence 2211 1 234555777777666541 111 233333 34444444432221 23568889988
Q ss_pred CCc
Q 010770 276 SAQ 278 (501)
Q Consensus 276 ~~~ 278 (501)
+.+
T Consensus 435 ~~~ 437 (706)
T 2z3z_A 435 KGS 437 (706)
T ss_dssp SCE
T ss_pred CCe
Confidence 776
No 87
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=95.00 E-value=2.2 Score=39.35 Aligned_cols=219 Identities=9% Similarity=-0.049 Sum_probs=111.8
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (501)
.++...++.+|+.... ...+.+||+. +++....... ....-+.++.. ++.+|+.... .+
T Consensus 66 ~i~~~~~g~l~v~~~~-----~~~v~~~d~~-g~~~~~~~~~---------~~~~~~~i~~~~~g~l~v~~~~-----~~ 125 (300)
T 2qc5_A 66 CLIVSSLGDIWFTENG-----ANKIGKLSKK-GGFTEYPLPQ---------PDSGPYGITEGLNGDIWFTQLN-----GD 125 (300)
T ss_dssp EEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECSS---------TTCCEEEEEECSTTCEEEEETT-----TT
T ss_pred eEEECCCCCEEEEecC-----CCeEEEECCC-CCeEEecCCC---------CCCCCccceECCCCCEEEEccC-----CC
Confidence 3444455667775431 2358889988 6665543210 11222344443 5688886432 23
Q ss_pred cEEEEECCCCeEEEEecCCCCCC-cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
.+++||+. ++..... .+. ...-++++...++.+|+.... ...+++||+ +.+...+...... ..-.
T Consensus 126 ~i~~~~~~-g~~~~~~----~~~~~~~~~~i~~d~~g~l~v~~~~-----~~~i~~~~~-~g~~~~~~~~~~~---~~~~ 191 (300)
T 2qc5_A 126 RIGKLTAD-GTIYEYD----LPNKGSYPAFITLGSDNALWFTENQ-----NNSIGRITN-TGKLEEYPLPTNA---AAPV 191 (300)
T ss_dssp EEEEECTT-SCEEEEE----CSSTTCCEEEEEECTTSSEEEEETT-----TTEEEEECT-TCCEEEEECSSTT---CCEE
T ss_pred eEEEECCC-CCEEEcc----CCCCCCCceeEEECCCCCEEEEecC-----CCeEEEECC-CCcEEEeeCCCCC---CCcc
Confidence 68899988 6666554 221 122234444456678876532 245899998 6777665421111 1112
Q ss_pred eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCC
Q 010770 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (501)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~ 259 (501)
.++.. ++.+|+..... ..+.+||+ +..+.....+.. ...-.+++. .++.+|+....
T Consensus 192 ~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~~~------ 249 (300)
T 2qc5_A 192 GITSGNDGALWFVEIMG------------NKIGRITT-TGEISEYDIPTP---NARPHAITAGKNSEIWFTEWG------ 249 (300)
T ss_dssp EEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEETT------
T ss_pred eEEECCCCCEEEEccCC------------CEEEEEcC-CCcEEEEECCCC---CCCceEEEECCCCCEEEeccC------
Confidence 33333 56788764221 33566787 566666542211 112233444 34578876521
Q ss_pred cccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
.+.+.+||+ +........... ....++++.. ++.||+.+
T Consensus 250 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~~~~g~l~v~~ 289 (300)
T 2qc5_A 250 ------ANQIGRITN-DNTIQEYQLQTE---NAEPHGITFGKDGSVWFAL 289 (300)
T ss_dssp ------TTEEEEECT-TSCEEEEECCST---TCCCCCEEECTTSCEEEEC
T ss_pred ------CCeEEEECC-CCcEEEEECCcc---CCccceeEeCCCCCEEEEc
Confidence 256889998 455554432111 1122344443 46677654
No 88
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=94.92 E-value=2.5 Score=40.55 Aligned_cols=112 Identities=7% Similarity=-0.030 Sum_probs=54.4
Q ss_pred EEEEEcccCCCc-cCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCC-EEEEEccccCCCCCCcE--EEE
Q 010770 32 KVVVFGGLVDKR-FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDF--WVL 107 (501)
Q Consensus 32 ~iyv~GG~~~~~-~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~~~--~~y 107 (501)
..+++|.+.... ..-.+|.+|+.++++..+... . ...|+ +.+..-++ .||+.+.... ....+ |.+
T Consensus 14 ~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~-~------~~~p~--~l~~spdg~~l~~~~~~~~--~~~~v~~~~~ 82 (361)
T 3scy_A 14 LTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDA-E------VANPS--YLIPSADGKFVYSVNEFSK--DQAAVSAFAF 82 (361)
T ss_dssp EEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEE-E------CSCCC--SEEECTTSSEEEEEECCSS--TTCEEEEEEE
T ss_pred eEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecc-c------CCCCc--eEEECCCCCEEEEEEccCC--CCCcEEEEEE
Confidence 445566654322 122456667888888877643 1 11111 22222334 5666654321 12344 555
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+..+++.+.+.. .+..........+.++.||+.+.. ...+.+|++.+
T Consensus 83 ~~~~g~~~~~~~---~~~~~~~p~~~~~dg~~l~~~~~~-----~~~v~~~~~~~ 129 (361)
T 3scy_A 83 DKEKGTLHLLNT---QKTMGADPCYLTTNGKNIVTANYS-----GGSITVFPIGQ 129 (361)
T ss_dssp ETTTTEEEEEEE---EECSSSCEEEEEECSSEEEEEETT-----TTEEEEEEBCT
T ss_pred eCCCCcEEEeeE---eccCCCCcEEEEECCCEEEEEECC-----CCEEEEEEeCC
Confidence 666677777653 221111222223344466665432 23477888764
No 89
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=94.90 E-value=2.7 Score=40.01 Aligned_cols=110 Identities=13% Similarity=0.076 Sum_probs=55.4
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~ 106 (501)
..++..++.|+.+ ..+.+||..++++....... .....-.+++.. ++..++.|+.+ ..+.+
T Consensus 61 ~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i 122 (372)
T 1k8k_C 61 APDSNRIVTCGTD-----RNAYVWTLKGRTWKPTLVIL--------RINRAARCVRWAPNEKKFAVGSGS-----RVISI 122 (372)
T ss_dssp ETTTTEEEEEETT-----SCEEEEEEETTEEEEEEECC--------CCSSCEEEEEECTTSSEEEEEETT-----SSEEE
T ss_pred eCCCCEEEEEcCC-----CeEEEEECCCCeeeeeEEee--------cCCCceeEEEECCCCCEEEEEeCC-----CEEEE
Confidence 3345566666643 35888899888876544321 111112222222 55667777643 24666
Q ss_pred EECCCCe-EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC
Q 010770 107 LDTDIWQ-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 107 yd~~t~~-W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
||..+.. |...... ..+....-.+++...++..++.|+.++ .+..||+.
T Consensus 123 ~d~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~l~~~~~dg-----~i~~~d~~ 172 (372)
T 1k8k_C 123 CYFEQENDWWVCKHI-KKPIRSTVLSLDWHPNSVLLAAGSCDF-----KCRIFSAY 172 (372)
T ss_dssp EEEETTTTEEEEEEE-CTTCCSCEEEEEECTTSSEEEEEETTS-----CEEEEECC
T ss_pred EEecCCCcceeeeee-ecccCCCeeEEEEcCCCCEEEEEcCCC-----CEEEEEcc
Confidence 6665443 3222210 011122223344445667777777543 47888854
No 90
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=94.86 E-value=2.3 Score=40.06 Aligned_cols=193 Identities=11% Similarity=0.051 Sum_probs=93.8
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcE-EeceecCCCCCCCCCCCCccee-EEEEe-CCEEEEEccccCCCCCCcEEEEE
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLW-FQPECTGNGSNGQVGPGPRAFH-IAVAI-DCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W-~~l~~~~~~~~~~~~p~~R~~h-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.+|+.+... ..++++|+.+++. ...... ...+ .+ .+..- +..+| .+... .....+.++|
T Consensus 53 ~l~~~~~~~-----~~i~~~d~~~~~~~~~~~~~--------~~~~--~~~~~~s~dg~~l~-~~~~~--~~~~~i~v~d 114 (331)
T 3u4y_A 53 NVVVTSDFC-----QTLVQIETQLEPPKVVAIQE--------GQSS--MADVDITPDDQFAV-TVTGL--NHPFNMQSYS 114 (331)
T ss_dssp EEEEEESTT-----CEEEEEECSSSSCEEEEEEE--------CSSC--CCCEEECTTSSEEE-ECCCS--SSSCEEEEEE
T ss_pred EEEEEeCCC-----CeEEEEECCCCceeEEeccc--------CCCC--ccceEECCCCCEEE-EecCC--CCcccEEEEE
Confidence 466665522 3799999998875 222111 1112 23 22222 34566 43221 1123799999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCccccc-EEEEECCCCce-EEcccCCCCCCCCcceeEEE
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSD-VYVLDTISLEW-MQLPVTGSVPPPRCGHTATM 185 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~-~~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~ 185 (501)
+.+++.....+. ....+.++...++ .+|+.+..+ .. +.+|++....- .... ....+....-..++.
T Consensus 115 ~~~~~~~~~~~~-----~~~~~~~~~spdg~~l~~~~~~~-----~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~ 183 (331)
T 3u4y_A 115 FLKNKFISTIPI-----PYDAVGIAISPNGNGLILIDRSS-----ANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITF 183 (331)
T ss_dssp TTTTEEEEEEEC-----CTTEEEEEECTTSSCEEEEEETT-----TTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEE
T ss_pred CCCCCeEEEEEC-----CCCccceEECCCCCEEEEEecCC-----CceEEEEEECCCCcEeecC-CccccCCCCccceEE
Confidence 998876654432 2222455555555 477765532 34 66666553221 1110 001111111233333
Q ss_pred e-CC-EEEEEcccCCCCCcccccccccccccccCCCCce---E-EeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCC
Q 010770 186 V-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW---T-QLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGG 257 (501)
Q Consensus 186 ~-~~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W---~-~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~ 257 (501)
. ++ .+|+.+... ..+.+||+.+.+. . .+. .+..| ..+++ .+..+|+....
T Consensus 184 spdg~~l~v~~~~~------------~~v~v~d~~~~~~~~~~~~~~-~~~~~-----~~~~~spdg~~l~v~~~~---- 241 (331)
T 3u4y_A 184 TPDGNFAFVANLIG------------NSIGILETQNPENITLLNAVG-TNNLP-----GTIVVSRDGSTVYVLTES---- 241 (331)
T ss_dssp CTTSSEEEEEETTT------------TEEEEEECSSTTSCEEEEEEE-CSSCC-----CCEEECTTSSEEEEECSS----
T ss_pred CCCCCEEEEEeCCC------------CeEEEEECCCCcccceeeecc-CCCCC-----ceEEECCCCCEEEEEEcC----
Confidence 3 34 577765321 3456678877665 2 222 11111 12333 23456665431
Q ss_pred CCcccccccCeEEEEEcCCCceEEcc
Q 010770 258 WLSRYDIYYNDTIILDRLSAQWKRLP 283 (501)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W~~v~ 283 (501)
.+.++++|+.+.+...+.
T Consensus 242 --------~~~i~~~d~~~~~~~~~~ 259 (331)
T 3u4y_A 242 --------TVDVFNFNQLSGTLSFVK 259 (331)
T ss_dssp --------EEEEEEEETTTTEEEEEE
T ss_pred --------CCEEEEEECCCCceeeec
Confidence 145899999988775544
No 91
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.84 E-value=1.3 Score=41.27 Aligned_cols=197 Identities=9% Similarity=-0.055 Sum_probs=100.1
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEE----ccccC---
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG--- 97 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~----GG~~~--- 97 (501)
++...++.+|+.... ...+.+||+.+++...+..... ..+..+....++.-++++|+. |....
T Consensus 74 l~~~~dg~l~v~~~~-----~~~i~~~d~~~g~~~~~~~~~~-----~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~ 143 (296)
T 3e5z_A 74 HCLNKQGHLIACSHG-----LRRLERQREPGGEWESIADSFE-----GKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEG 143 (296)
T ss_dssp EEECTTCCEEEEETT-----TTEEEEECSTTCCEEEEECEET-----TEECCCCCCEEECTTSCEEEEECSHHHHCGGGS
T ss_pred eeECCCCcEEEEecC-----CCeEEEEcCCCCcEEEEeeccC-----CCCCCCCCCEEECCCCCEEEECCcccccccccc
Confidence 333345667665431 1458999998888776542210 011112223333346788886 44210
Q ss_pred -----CCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC-CCce-EEccc
Q 010770 98 -----SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEW-MQLPV 170 (501)
Q Consensus 98 -----~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W-~~~~~ 170 (501)
......++.+++. ++...+.. .. ..-.+.+...++++++.+.. .+.+++||+. +.+. .....
T Consensus 144 ~~~~~~~~~~~l~~~~~~-g~~~~~~~--~~---~~~~gi~~s~dg~~lv~~~~-----~~~i~~~~~~~~g~~~~~~~~ 212 (296)
T 3e5z_A 144 YGGEMELPGRWVFRLAPD-GTLSAPIR--DR---VKPNGLAFLPSGNLLVSDTG-----DNATHRYCLNARGETEYQGVH 212 (296)
T ss_dssp SCCCCCSSSCEEEEECTT-SCEEEEEC--CC---SSEEEEEECTTSCEEEEETT-----TTEEEEEEECSSSCEEEEEEE
T ss_pred ccccccCCCcEEEEECCC-CCEEEeec--CC---CCCccEEECCCCCEEEEeCC-----CCeEEEEEECCCCcCcCCCeE
Confidence 1113479999988 55555542 11 11234444456666644332 2468899886 5555 21111
Q ss_pred CCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE---eCCE
Q 010770 171 TGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS---GGHY 246 (501)
Q Consensus 171 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~---~~~~ 246 (501)
. ...... -..++.. +++||+..+ ..+.+||++......+..+ .. -.+++. .++.
T Consensus 213 ~-~~~~~~-p~~i~~d~~G~l~v~~~--------------~~v~~~~~~g~~~~~~~~~----~~--~~~~~f~~~d~~~ 270 (296)
T 3e5z_A 213 F-TVEPGK-TDGLRVDAGGLIWASAG--------------DGVHVLTPDGDELGRVLTP----QT--TSNLCFGGPEGRT 270 (296)
T ss_dssp E-CCSSSC-CCSEEEBTTSCEEEEET--------------TEEEEECTTSCEEEEEECS----SC--CCEEEEESTTSCE
T ss_pred e-eCCCCC-CCeEEECCCCCEEEEcC--------------CeEEEECCCCCEEEEEECC----CC--ceeEEEECCCCCE
Confidence 0 111111 1133333 678888761 3456778886655555532 21 112222 1236
Q ss_pred EEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 247 LLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 247 i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
||+... +.+|+|++.+..
T Consensus 271 L~v~t~--------------~~l~~~~~~~~~ 288 (296)
T 3e5z_A 271 LYMTVS--------------TEFWSIETNVRG 288 (296)
T ss_dssp EEEEET--------------TEEEEEECSCCB
T ss_pred EEEEcC--------------CeEEEEEccccc
Confidence 777542 358999988765
No 92
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=94.75 E-value=2.3 Score=41.92 Aligned_cols=67 Identities=7% Similarity=-0.083 Sum_probs=37.8
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.+ ..+.+||+.+..-...-. . ......++....++.+++.|+.++ .+.+||+.+...
T Consensus 203 ~~~~l~s~s~D-----~~i~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~~g~~l~s~s~D~-----~v~vwd~~~~~~ 268 (410)
T 1vyh_C 203 NGDHIVSASRD-----KTIKMWEVQTGYCVKTFT---G-HREWVRMVRPNQDGTLIASCSNDQ-----TVRVWVVATKEC 268 (410)
T ss_dssp SSSEEEEEETT-----SEEEEEETTTCCEEEEEE---C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCE
T ss_pred CCCEEEEEeCC-----CeEEEEECCCCcEEEEEe---C-CCccEEEEEECCCCCEEEEEcCCC-----eEEEEECCCCce
Confidence 45666777643 358889998876433221 1 111112223335667788887654 377788777654
Q ss_pred E
Q 010770 166 M 166 (501)
Q Consensus 166 ~ 166 (501)
.
T Consensus 269 ~ 269 (410)
T 1vyh_C 269 K 269 (410)
T ss_dssp E
T ss_pred e
Confidence 4
No 93
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=94.73 E-value=0.96 Score=45.81 Aligned_cols=59 Identities=12% Similarity=0.133 Sum_probs=38.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEEC
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
++++|+|-| +..|+||..+.+.....-. .+| . .-++....+++|+|-| +..|+||.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~~w~-------gi~--~-iDAA~~~~g~~YfFkG-------~~y~rfd~ 213 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKERSWP-------AVG--N-CTSALRWLGRYYCFQG-------NQFLRFNP 213 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEECCT-------TSC--C-CSEEEEETTEEEEEET-------TEEEEECT
T ss_pred CCeEEEEec-------ccEEEEecccceeecccCC-------CCC--c-cchheeeCCceEEEEC-------CEEEEEcC
Confidence 578899988 5689999988765431110 112 2 3455555789999977 35788887
Q ss_pred CCC
Q 010770 110 DIW 112 (501)
Q Consensus 110 ~t~ 112 (501)
.++
T Consensus 214 ~~~ 216 (460)
T 1qhu_A 214 VSG 216 (460)
T ss_dssp TTC
T ss_pred ccC
Confidence 654
No 94
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=94.70 E-value=2.6 Score=38.80 Aligned_cols=221 Identities=11% Similarity=-0.043 Sum_probs=114.9
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCC
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRL 101 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~ 101 (501)
++++...++.+|+.... ...+.+||+. ++...+... .....-++++.. ++.+|+.... .
T Consensus 23 ~~i~~d~~g~l~v~~~~-----~~~v~~~~~~-~~~~~~~~~---------~~~~~~~~i~~~~~g~l~v~~~~-----~ 82 (300)
T 2qc5_A 23 YGITSSEDGKVWFTQHK-----ANKISSLDQS-GRIKEFEVP---------TPDAKVMCLIVSSLGDIWFTENG-----A 82 (300)
T ss_dssp EEEEECTTSCEEEEETT-----TTEEEEECTT-SCEEEEECS---------STTCCEEEEEECTTSCEEEEETT-----T
T ss_pred ceeeECCCCCEEEEcCC-----CCeEEEECCC-CceEEEECC---------CCCCcceeEEECCCCCEEEEecC-----C
Confidence 45555556788886532 2458899988 776654311 011122334333 4678886431 2
Q ss_pred CcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
..+.+||+. +++...... .....-++++...++.+|+.... ...+++||+. .+........ ....-+
T Consensus 83 ~~v~~~d~~-g~~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~~~~-g~~~~~~~~~---~~~~~~ 149 (300)
T 2qc5_A 83 NKIGKLSKK-GGFTEYPLP---QPDSGPYGITEGLNGDIWFTQLN-----GDRIGKLTAD-GTIYEYDLPN---KGSYPA 149 (300)
T ss_dssp TEEEEECTT-SCEEEEECS---STTCCEEEEEECSTTCEEEEETT-----TTEEEEECTT-SCEEEEECSS---TTCCEE
T ss_pred CeEEEECCC-CCeEEecCC---CCCCCCccceECCCCCEEEEccC-----CCeEEEECCC-CCEEEccCCC---CCCCce
Confidence 458899988 777655421 11122334444456788886532 2358899987 6665543111 111223
Q ss_pred eEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCC
Q 010770 182 TATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (501)
Q Consensus 182 ~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~ 259 (501)
.++.. ++++|+..... ..+.+||+ +.+...+..+... ..-.+++. .++.+|+....
T Consensus 150 ~i~~d~~g~l~v~~~~~------------~~i~~~~~-~g~~~~~~~~~~~---~~~~~i~~d~~g~l~v~~~~------ 207 (300)
T 2qc5_A 150 FITLGSDNALWFTENQN------------NSIGRITN-TGKLEEYPLPTNA---AAPVGITSGNDGALWFVEIM------ 207 (300)
T ss_dssp EEEECTTSSEEEEETTT------------TEEEEECT-TCCEEEEECSSTT---CCEEEEEECTTSSEEEEETT------
T ss_pred eEEECCCCCEEEEecCC------------CeEEEECC-CCcEEEeeCCCCC---CCcceEEECCCCCEEEEccC------
Confidence 33333 46788754211 34566787 6666665422111 12223333 35677775421
Q ss_pred cccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEc
Q 010770 260 SRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFG 308 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~G 308 (501)
.+.+++||+ +..+..+..... .....+++.- ++.||+..
T Consensus 208 ------~~~i~~~~~-~g~~~~~~~~~~---~~~~~~i~~d~~g~l~v~~ 247 (300)
T 2qc5_A 208 ------GNKIGRITT-TGEISEYDIPTP---NARPHAITAGKNSEIWFTE 247 (300)
T ss_dssp ------TTEEEEECT-TCCEEEEECSST---TCCEEEEEECSTTCEEEEE
T ss_pred ------CCEEEEEcC-CCcEEEEECCCC---CCCceEEEECCCCCEEEec
Confidence 246899998 556655432111 1122333333 46777765
No 95
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.69 E-value=3.8 Score=40.70 Aligned_cols=104 Identities=14% Similarity=0.058 Sum_probs=55.0
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 111 (501)
.+++.|+.+ ..+.+||..+++-...-. .....-.+++...+.+++.|+.+ ..+.++|+.+
T Consensus 133 ~~l~sgs~d-----g~i~vwd~~~~~~~~~~~----------~h~~~V~~l~~~~~~~l~s~s~d-----g~i~vwd~~~ 192 (464)
T 3v7d_B 133 NYVITGADD-----KMIRVYDSINKKFLLQLS----------GHDGGVWALKYAHGGILVSGSTD-----RTVRVWDIKK 192 (464)
T ss_dssp TEEEEEETT-----SCEEEEETTTTEEEEEEC----------CCSSCEEEEEECSTTEEEEEETT-----SCEEEEETTT
T ss_pred CEEEEEcCC-----CcEEEEECCCCcEEEEEe----------CCCcCEEEEEEcCCCEEEEEeCC-----CCEEEEECCC
Confidence 456666543 358899988775333210 01111223333334466677654 3588999988
Q ss_pred CeEEEEecCCCCCCcCCccEEEEE--cCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 112 WQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 112 ~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++-...-. ... ..-.++... .++..++.|+.++ .+..||+.+..
T Consensus 193 ~~~~~~~~---~h~-~~v~~l~~~~~~~~~~l~s~s~d~-----~i~vwd~~~~~ 238 (464)
T 3v7d_B 193 GCCTHVFE---GHN-STVRCLDIVEYKNIKYIVTGSRDN-----TLHVWKLPKES 238 (464)
T ss_dssp TEEEEEEC---CCS-SCEEEEEEEESSSCEEEEEEETTS-----CEEEEECCCCC
T ss_pred CcEEEEEC---CCC-CccEEEEEecCCCCCEEEEEcCCC-----cEEEeeCCCCc
Confidence 86443321 111 111222222 4557888887654 37777877654
No 96
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=94.68 E-value=2.2 Score=40.16 Aligned_cols=104 Identities=9% Similarity=-0.034 Sum_probs=50.9
Q ss_pred cEEEEEcccCCCccCCceEEEEcC-CCcEEeceecCCCCCCCCCCCCcceeEEEE-eCC-EEEEEccccCCCCCCcEEEE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDC-HMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~-~iyv~GG~~~~~~~~~~~~y 107 (501)
..+|+.++. ...+.+||.. ++....+..... ...-+.++. -++ .||+.+. .. ..+.+|
T Consensus 5 ~~l~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~spdg~~l~~~~~-~~----~~v~~~ 65 (343)
T 1ri6_A 5 QTVYIASPE-----SQQIHVWNLNHEGALTLTQVVDV---------PGQVQPMVVSPDKRYLYVGVR-PE----FRVLAY 65 (343)
T ss_dssp EEEEEEEGG-----GTEEEEEEECTTSCEEEEEEEEC---------SSCCCCEEECTTSSEEEEEET-TT----TEEEEE
T ss_pred EEEEEeCCC-----CCeEEEEEECCCCcEEEeeeEec---------CCCCceEEECCCCCEEEEeec-CC----CeEEEE
Confidence 456666443 2457888874 455555443211 111122222 244 4665543 21 467777
Q ss_pred ECC--CCeEEEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECC
Q 010770 108 DTD--IWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 108 d~~--t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
++. ++++..+.. .+....-..++...++. +|+.+.. ...+.+||+.
T Consensus 66 ~~~~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~ 114 (343)
T 1ri6_A 66 RIAPDDGALTFAAE---SALPGSLTHISTDHQGQFVFVGSYN-----AGNVSVTRLE 114 (343)
T ss_dssp EECTTTCCEEEEEE---EECSSCCSEEEECTTSSEEEEEETT-----TTEEEEEEEE
T ss_pred EecCCCCceeeccc---cccCCCCcEEEEcCCCCEEEEEecC-----CCeEEEEECC
Confidence 776 777776643 22122233444444554 5555432 1347788773
No 97
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=94.62 E-value=1.5 Score=42.07 Aligned_cols=158 Identities=9% Similarity=0.075 Sum_probs=81.0
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
..++.+++.||.++ .+.++|..++.|........ ... ..-.+++. -++..++.|+.++ .+.+
T Consensus 25 sp~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~------~h~-~~v~~~~~sp~g~~l~s~s~D~-----~v~i 87 (345)
T 3fm0_A 25 NPAGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSE------GHQ-RTVRKVAWSPCGNYLASASFDA-----TTCI 87 (345)
T ss_dssp CTTSSCEEEEETTS-----CEEEEEEETTEEEEEEEECS------SCS-SCEEEEEECTTSSEEEEEETTS-----CEEE
T ss_pred CCCCCEEEEEcCCC-----eEEEEEcCCCcceeeeeecc------ccC-CcEEEEEECCCCCEEEEEECCC-----cEEE
Confidence 34567778887543 47788888888765432210 011 11122222 2566777777543 4677
Q ss_pred EECCCCeEEEEecCCCCCCc-CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc-eEEcccCCCCCCCCcce-eE
Q 010770 107 LDTDIWQWSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WMQLPVTGSVPPPRCGH-TA 183 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~p~~r~~~-~~ 183 (501)
+|..+..+..+.. +... ..-.+++...++.+++.|+.++ .+.++|+.+.. +..+.. +....... ++
T Consensus 88 w~~~~~~~~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D~-----~v~iwd~~~~~~~~~~~~---~~~h~~~v~~~ 156 (345)
T 3fm0_A 88 WKKNQDDFECVTT---LEGHENEVKSVAWAPSGNLLATCSRDK-----SVWVWEVDEEDEYECVSV---LNSHTQDVKHV 156 (345)
T ss_dssp EEECCC-EEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEECTTSCEEEEEE---ECCCCSCEEEE
T ss_pred EEccCCCeEEEEE---ccCCCCCceEEEEeCCCCEEEEEECCC-----eEEEEECCCCCCeEEEEE---ecCcCCCeEEE
Confidence 7877776655443 1111 1122333445667888888654 37788876543 332221 11111111 12
Q ss_pred EEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEe
Q 010770 184 TMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL 225 (501)
Q Consensus 184 ~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~ 225 (501)
+.. ++.+++.|+..+ .+..||..+..|..+
T Consensus 157 ~~~p~~~~l~s~s~d~------------~i~~w~~~~~~~~~~ 187 (345)
T 3fm0_A 157 VWHPSQELLASASYDD------------TVKLYREEEDDWVCC 187 (345)
T ss_dssp EECSSSSCEEEEETTS------------CEEEEEEETTEEEEE
T ss_pred EECCCCCEEEEEeCCC------------cEEEEEecCCCEEEE
Confidence 222 456666666532 345567777777644
No 98
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.60 E-value=1.4 Score=47.24 Aligned_cols=214 Identities=10% Similarity=0.002 Sum_probs=102.5
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCC---cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNK---LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~---~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~ 104 (501)
..+++.++++.. ..++++|..++ .-..+... .......+.+-+++.++++.. +.+
T Consensus 117 SpDg~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~~----------~~~~~~~~~SPDG~~la~~~~------~~i 174 (741)
T 2ecf_A 117 SPDAQRLLFPLG------GELYLYDLKQEGKAAVRQLTHG----------EGFATDAKLSPKGGFVSFIRG------RNL 174 (741)
T ss_dssp CTTSSEEEEEET------TEEEEEESSSCSTTSCCBCCCS----------SSCEEEEEECTTSSEEEEEET------TEE
T ss_pred CCCCCEEEEEeC------CcEEEEECCCCCcceEEEcccC----------CcccccccCCCCCCEEEEEeC------CcE
Confidence 344555555543 67999999887 54443311 111222223335554455431 379
Q ss_pred EEEECCCCeEEEEecCCCCCC--cC----------CccEEEEEcCcEEEEEecCCCC-----------------------
Q 010770 105 WVLDTDIWQWSELTSFGDLPS--PR----------DFAAASAIGNRKIVMYGGWDGK----------------------- 149 (501)
Q Consensus 105 ~~yd~~t~~W~~~~~~~~~p~--~r----------~~~~~~~~~~~~iyv~GG~~~~----------------------- 149 (501)
+++|+.+++...+...+..+. .. ...+.+...|++.++++..+..
T Consensus 175 ~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~ 254 (741)
T 2ecf_A 175 WVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYP 254 (741)
T ss_dssp EEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECC
T ss_pred EEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecC
Confidence 999999988777653211100 00 0123344445554444433221
Q ss_pred -----cccccEEEEECCC-CceEEcccCCCCCCCCc-ceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCce
Q 010770 150 -----KWLSDVYVLDTIS-LEWMQLPVTGSVPPPRC-GHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (501)
Q Consensus 150 -----~~~~~~~~yd~~t-~~W~~~~~~~~~p~~r~-~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W 222 (501)
.....++++|+.+ .+-..+... . ..... .....-.+..|++........ -..+..+|+.+.+.
T Consensus 255 ~~g~~~~~~~l~~~d~~~~~~~~~~~~~-~-~~~~~~~~~~~pDg~~l~~~~~~~~~~--------~~~i~~~d~~~g~~ 324 (741)
T 2ecf_A 255 AAGDANVQVKLGVISPAEQAQTQWIDLG-K-EQDIYLARVNWRDPQHLSFQRQSRDQK--------KLDLVEVTLASNQQ 324 (741)
T ss_dssp BTTSCCCEEEEEEECSSTTCCCEEECCC-S-CSSEEEEEEEEEETTEEEEEEEETTSS--------EEEEEEEETTTCCE
T ss_pred CCCCCCCeeEEEEEECCCCCceEEecCC-C-CcceEEEEEEeCCCCEEEEEEecccCC--------eEEEEEEECCCCce
Confidence 1123688899888 776555311 0 11111 111122234555544322111 14566678888887
Q ss_pred EEeecCCCCC-CCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEccc
Q 010770 223 TQLKLPGQAP-SSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 223 ~~~~~~g~~p-~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
..+....... .......+..-++++++.++.++ ...+|.+|.... ...+..
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g----------~~~l~~~~~~~~-~~~l~~ 376 (741)
T 2ecf_A 325 RVLAHETSPTWVPLHNSLRFLDDGSILWSSERTG----------FQHLYRIDSKGK-AAALTH 376 (741)
T ss_dssp EEEEEEECSSCCCCCSCCEECTTSCEEEEECTTS----------SCEEEEECSSSC-EEESCC
T ss_pred EEEEEcCCCCcCCcCCceEECCCCeEEEEecCCC----------ccEEEEEcCCCC-eeeeee
Confidence 6654211100 00011112223455555554321 257899997766 666554
No 99
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=94.59 E-value=1.3 Score=41.33 Aligned_cols=208 Identities=8% Similarity=-0.093 Sum_probs=104.1
Q ss_pred cCcEEEEECCc-EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCC
Q 010770 21 SGHSAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGS 98 (501)
Q Consensus 21 ~~h~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~ 98 (501)
...+.+...++ .+|+.+... ..+++||+.++ ...+.. +... -++++. -++++|+....
T Consensus 29 ~~eg~~~d~~g~~l~~~~~~~-----~~i~~~~~~~~-~~~~~~----------~~~~-~~~l~~~~dg~l~v~~~~--- 88 (296)
T 3e5z_A 29 WTEGPVYVPARSAVIFSDVRQ-----NRTWAWSDDGQ-LSPEMH----------PSHH-QNGHCLNKQGHLIACSHG--- 88 (296)
T ss_dssp SEEEEEEEGGGTEEEEEEGGG-----TEEEEEETTSC-EEEEES----------SCSS-EEEEEECTTCCEEEEETT---
T ss_pred cccCCeEeCCCCEEEEEeCCC-----CEEEEEECCCC-eEEEEC----------CCCC-cceeeECCCCcEEEEecC---
Confidence 33444444444 477776542 35899999988 555431 1111 233333 25678776421
Q ss_pred CCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEE----ecCC--------CCcccccEEEEECCCCceE
Q 010770 99 RRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWD--------GKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 99 ~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~----GG~~--------~~~~~~~~~~yd~~t~~W~ 166 (501)
...+.+||+.+++...+..............++...++.+|+. |... .......+++||+. .+..
T Consensus 89 --~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~ 165 (296)
T 3e5z_A 89 --LRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS 165 (296)
T ss_dssp --TTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE
T ss_pred --CCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE
Confidence 2468999998888776642101111111233455567788886 3311 01123479999987 5555
Q ss_pred EcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCC-CCce-EEeecCCCCCCCceeeEEEEe
Q 010770 167 QLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENE-TPGW-TQLKLPGQAPSSRCGHTITSG 243 (501)
Q Consensus 167 ~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~-t~~W-~~~~~~g~~p~~r~~~s~~~~ 243 (501)
.+.. ... .-..++.. ++++++.... . ..+.+||+. +.+. ...... .........-+...
T Consensus 166 ~~~~--~~~---~~~gi~~s~dg~~lv~~~~-~-----------~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~ 227 (296)
T 3e5z_A 166 APIR--DRV---KPNGLAFLPSGNLLVSDTG-D-----------NATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDA 227 (296)
T ss_dssp EEEC--CCS---SEEEEEECTTSCEEEEETT-T-----------TEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBT
T ss_pred Eeec--CCC---CCccEEECCCCCEEEEeCC-C-----------CeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECC
Confidence 5431 111 11233333 4555544322 1 345566665 4444 211110 11111111122234
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcc
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~ 283 (501)
++.+|+.. . +.|.+||+.......+.
T Consensus 228 ~G~l~v~~---~-----------~~v~~~~~~g~~~~~~~ 253 (296)
T 3e5z_A 228 GGLIWASA---G-----------DGVHVLTPDGDELGRVL 253 (296)
T ss_dssp TSCEEEEE---T-----------TEEEEECTTSCEEEEEE
T ss_pred CCCEEEEc---C-----------CeEEEECCCCCEEEEEE
Confidence 66788766 1 45899999866555554
No 100
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=94.56 E-value=1.9 Score=39.31 Aligned_cols=191 Identities=10% Similarity=-0.008 Sum_probs=96.2
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (501)
.++...++.+|+... ...+.+||+.+.....+.. .....-+.++.. +++||+.... ..
T Consensus 71 ~i~~~~~g~l~v~~~------~~~i~~~d~~~~~~~~~~~----------~~~~~p~~i~~~~~g~l~v~~~~-----~~ 129 (270)
T 1rwi_B 71 GLAVDGAGTVYVTDF------NNRVVTLAAGSNNQTVLPF----------DGLNYPEGLAVDTQGAVYVADRG-----NN 129 (270)
T ss_dssp CEEECTTCCEEEEET------TTEEEEECTTCSCCEECCC----------CSCSSEEEEEECTTCCEEEEEGG-----GT
T ss_pred eeEECCCCCEEEEcC------CCEEEEEeCCCceEeeeec----------CCcCCCcceEECCCCCEEEEECC-----CC
Confidence 344444456777654 1358888887765443321 111122334443 5678887532 23
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCccee
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHT 182 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~ 182 (501)
.+++++..+........ .....-.+++...++.+|+.... ...+.+||+.+..-...... .. ..-..
T Consensus 130 ~i~~~~~~~~~~~~~~~----~~~~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~~~~~~~~~~~-~~---~~p~~ 196 (270)
T 1rwi_B 130 RVVKLAAGSKTQTVLPF----TGLNDPDGVAVDNSGNVYVTDTD-----NNRVVKLEAESNNQVVLPFT-DI---TAPWG 196 (270)
T ss_dssp EEEEECTTCCSCEECCC----CSCCSCCCEEECTTCCEEEEEGG-----GTEEEEECTTTCCEEECCCS-SC---CSEEE
T ss_pred EEEEEECCCceeEeecc----ccCCCceeEEEeCCCCEEEEECC-----CCEEEEEecCCCceEeeccc-CC---CCceE
Confidence 57888776654433221 11112234445556788887542 24689999887664443211 11 11223
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCc
Q 010770 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (501)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~ 260 (501)
++.. ++.+|+..... ..+.+||+.+..-......+ ...-.++++ -++.+|+....
T Consensus 197 i~~d~~g~l~v~~~~~------------~~v~~~~~~~~~~~~~~~~~----~~~p~~i~~~~~g~l~v~~~~------- 253 (270)
T 1rwi_B 197 IAVDEAGTVYVTEHNT------------NQVVKLLAGSTTSTVLPFTG----LNTPLAVAVDSDRTVYVADRG------- 253 (270)
T ss_dssp EEECTTCCEEEEETTT------------SCEEEECTTCSCCEECCCCS----CSCEEEEEECTTCCEEEEEGG-------
T ss_pred EEECCCCCEEEEECCC------------CcEEEEcCCCCcceeeccCC----CCCceeEEECCCCCEEEEECC-------
Confidence 3333 45888865321 34556677665443322111 112233444 34578876542
Q ss_pred ccccccCeEEEEEcCC
Q 010770 261 RYDIYYNDTIILDRLS 276 (501)
Q Consensus 261 ~~~~~~~~v~~yd~~~ 276 (501)
.+.|.+|++..
T Consensus 254 -----~~~v~~~~~~~ 264 (270)
T 1rwi_B 254 -----NDRVVKLTSLE 264 (270)
T ss_dssp -----GTEEEEECCCG
T ss_pred -----CCEEEEEcCCC
Confidence 25678887644
No 101
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=94.53 E-value=1.7 Score=46.47 Aligned_cols=129 Identities=17% Similarity=0.059 Sum_probs=69.4
Q ss_pred EEEEECCcEEEEEccc-CCCccCCceEEEEcCCCcEEeceecCCCC-CCC------CCCC--Cc------ceeEEEEeCC
Q 010770 24 SAVNIGKSKVVVFGGL-VDKRFLSDVVVYDIDNKLWFQPECTGNGS-NGQ------VGPG--PR------AFHIAVAIDC 87 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~-~~~~~~~~v~~yd~~t~~W~~l~~~~~~~-~~~------~~p~--~R------~~h~~~~~~~ 87 (501)
......+++.+++++. +++.....++++|+.+++...+....... ++. .... .| ....+..-++
T Consensus 41 ~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg 120 (741)
T 2ecf_A 41 KPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDA 120 (741)
T ss_dssp EEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTS
T ss_pred CceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCC
Confidence 3344445666666665 44334458999999999887765321100 000 0000 00 1122223355
Q ss_pred EEEEEccccCCCCCCcEEEEECCCC---eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 88 HMFIFGGRFGSRRLGDFWVLDTDIW---QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 88 ~iyv~GG~~~~~~~~~~~~yd~~t~---~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+.++++.. ..++++|+.++ .-..+.. ........+...|++.++++.. ..++++|+.+.+
T Consensus 121 ~~l~~~~~------~~i~~~d~~~~~~~~~~~l~~-----~~~~~~~~~~SPDG~~la~~~~------~~i~~~d~~~g~ 183 (741)
T 2ecf_A 121 QRLLFPLG------GELYLYDLKQEGKAAVRQLTH-----GEGFATDAKLSPKGGFVSFIRG------RNLWVIDLASGR 183 (741)
T ss_dssp SEEEEEET------TEEEEEESSSCSTTSCCBCCC-----SSSCEEEEEECTTSSEEEEEET------TEEEEEETTTTE
T ss_pred CEEEEEeC------CcEEEEECCCCCcceEEEccc-----CCcccccccCCCCCCEEEEEeC------CcEEEEecCCCC
Confidence 55555442 68999999887 5444331 1112233444456665555542 369999999988
Q ss_pred eEEcc
Q 010770 165 WMQLP 169 (501)
Q Consensus 165 W~~~~ 169 (501)
...+.
T Consensus 184 ~~~~~ 188 (741)
T 2ecf_A 184 QMQLT 188 (741)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 87765
No 102
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=94.51 E-value=0.68 Score=49.61 Aligned_cols=214 Identities=13% Similarity=0.062 Sum_probs=109.6
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCC--------CC
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS--------RR 100 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~--------~~ 100 (501)
.+++.++|.-..++.....++++|+.+++...... .+.......+.+-+++.++++..... ..
T Consensus 130 PDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~---------~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~ 200 (695)
T 2bkl_A 130 WDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDV---------IEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPG 200 (695)
T ss_dssp TTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCC---------BSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGG
T ss_pred CCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcc---------cCcccccceEEecCCCEEEEEEecCCCCCccccCCC
Confidence 34555555443333445689999999988641110 11111122233335665666554332 23
Q ss_pred CCcEEEEECCCCeE--EEEecCCCCCC-cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCC
Q 010770 101 LGDFWVLDTDIWQW--SELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (501)
Q Consensus 101 ~~~~~~yd~~t~~W--~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~ 177 (501)
...++.+++.+..- ..+.. .+. +....+.....+++..+++..... ..+.++.+|..+..|..+... ..
T Consensus 201 ~~~v~~~~l~t~~~~~~lv~~---~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~~~~~~~~~~~l~~~---~~- 272 (695)
T 2bkl_A 201 YTTIRYHTLGTEPSKDTVVHE---RTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYWKRPGEKDFRLLVKG---VG- 272 (695)
T ss_dssp GCEEEEEETTSCGGGCEEEEC---CCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEEECTTCSSCEEEEEC---SS-
T ss_pred CCEEEEEECCCCchhceEEEe---cCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEEEcCCCCceEEeecC---CC-
Confidence 45699999987752 23332 222 223334444456655555443221 345788888878888887621 11
Q ss_pred CcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc---eEEeecCCCCCCCceeeEEEEeCCEEEEEcCCC
Q 010770 178 RCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG---WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (501)
Q Consensus 178 r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~---W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~ 254 (501)
.....+..++.+|+........ ..+..+|+.+.. |+.+.... + ...-..+...++.+++....+
T Consensus 273 -~~~~~~~~~g~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~~--~-~~~l~~~~~~~~~lv~~~~~d 339 (695)
T 2bkl_A 273 -AKYEVHAWKDRFYVLTDEGAPR---------QRVFEVDPAKPARASWKEIVPED--S-SASLLSVSIVGGHLSLEYLKD 339 (695)
T ss_dssp -CCEEEEEETTEEEEEECTTCTT---------CEEEEEBTTBCSGGGCEEEECCC--S-SCEEEEEEEETTEEEEEEEET
T ss_pred -ceEEEEecCCcEEEEECCCCCC---------CEEEEEeCCCCCccCCeEEecCC--C-CCeEEEEEEECCEEEEEEEEC
Confidence 1122223455566654432111 334555776654 88776211 1 111223334578887776433
Q ss_pred CCCCCcccccccCeEEEEEcCCCceEEc
Q 010770 255 TGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
. ...+|++++....-..+
T Consensus 340 g----------~~~l~~~~~~g~~~~~l 357 (695)
T 2bkl_A 340 A----------TSEVRVATLKGKPVRTV 357 (695)
T ss_dssp T----------EEEEEEEETTCCEEEEC
T ss_pred C----------EEEEEEEeCCCCeeEEe
Confidence 2 35688888765544444
No 103
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=94.48 E-value=3.8 Score=39.69 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=38.8
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++.|+.+ ..+.+||........+.. ....-.+++...++..++.|+.++ .+.+||+.+.+.
T Consensus 119 ~~~~l~~~~~d-----g~i~i~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~l~~~~~d~-----~i~iwd~~~~~~ 183 (425)
T 1r5m_A 119 DGNSIVTGVEN-----GELRLWNKTGALLNVLNF-----HRAPIVSVKWNKDGTHIISMDVEN-----VTILWNVISGTV 183 (425)
T ss_dssp TSSEEEEEETT-----SCEEEEETTSCEEEEECC-----CCSCEEEEEECTTSSEEEEEETTC-----CEEEEETTTTEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeeccC-----CCccEEEEEECCCCCEEEEEecCC-----eEEEEECCCCcE
Confidence 55677777654 357888855444444431 112223344445566666776543 478889887765
Q ss_pred EEc
Q 010770 166 MQL 168 (501)
Q Consensus 166 ~~~ 168 (501)
...
T Consensus 184 ~~~ 186 (425)
T 1r5m_A 184 MQH 186 (425)
T ss_dssp EEE
T ss_pred EEE
Confidence 543
No 104
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=94.43 E-value=2.7 Score=40.01 Aligned_cols=124 Identities=12% Similarity=0.051 Sum_probs=62.9
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCC-EEEEEccccCCCCCCc
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGD 103 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~~ 103 (501)
++...++++|+.+... ....+++||+.++.+..+..... ......+.++.-++ .||+.+.. ...
T Consensus 45 ~a~spdg~l~~~~~~~---~~~~v~~~~~~~g~~~~~~~~~~-------~~~~p~~~a~spdg~~l~~~~~~-----~~~ 109 (347)
T 3hfq_A 45 LALSAKDCLYSVDKED---DEGGIAAWQIDGQTAHKLNTVVA-------PGTPPAYVAVDEARQLVYSANYH-----KGT 109 (347)
T ss_dssp EEECTTCEEEEEEEET---TEEEEEEEEEETTEEEEEEEEEE-------ESCCCSEEEEETTTTEEEEEETT-----TTE
T ss_pred EEEccCCeEEEEEecC---CCceEEEEEecCCcEEEeeeeec-------CCCCCEEEEECCCCCEEEEEeCC-----CCE
Confidence 3334456766665421 12568999998888877654210 11112233333344 56665421 235
Q ss_pred EEEEECC-CCeEEEEec---CCCCCCcC----CccEEEEEcCcEEEEEecCCCCcccccEEEEECC-CCceEEc
Q 010770 104 FWVLDTD-IWQWSELTS---FGDLPSPR----DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI-SLEWMQL 168 (501)
Q Consensus 104 ~~~yd~~-t~~W~~~~~---~~~~p~~r----~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~-t~~W~~~ 168 (501)
+.+|++. +.+...+.. .+..|.+| ..++++...++++|+.+.. .+.+.+||+. +.+...+
T Consensus 110 v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~-----~~~v~~~~~~~~g~~~~~ 178 (347)
T 3hfq_A 110 AEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLG-----SDKVYVYNVSDAGQLSEQ 178 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETT-----TTEEEEEEECTTSCEEEE
T ss_pred EEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCC-----CCEEEEEEECCCCcEEEe
Confidence 7778874 334443322 12222222 1233455556677765432 2358888887 5555543
No 105
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=94.39 E-value=1.6 Score=46.81 Aligned_cols=211 Identities=9% Similarity=0.063 Sum_probs=107.5
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCC-EEEEEccccCC--------C
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGS--------R 99 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~--------~ 99 (501)
.+++.++|+-..++.....++++|+.+++...... +..+....+.+ ++ .||+. ..... .
T Consensus 138 pDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~----------~~~k~~~~~Ws-Dg~~l~y~-~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 138 RDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL----------KDVKFSGISWL-GNEGFFYS-SYDKPDGSELSART 205 (693)
T ss_dssp TTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE----------EEEESCCCEEE-TTTEEEEE-ESSCCC-------C
T ss_pred CCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc----------CCceeccEEEe-CCCEEEEE-EecCcccccccccC
Confidence 34555555433333344689999999998765432 11112233344 55 44443 32211 3
Q ss_pred CCCcEEEEECCCCeE--EEEecCCCCCC--cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC--ceEEcccCCC
Q 010770 100 RLGDFWVLDTDIWQW--SELTSFGDLPS--PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL--EWMQLPVTGS 173 (501)
Q Consensus 100 ~~~~~~~yd~~t~~W--~~~~~~~~~p~--~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~~~ 173 (501)
....++.+++.+..= ..+.. .+. +....++....+++.+++..... ...+.+|.+|..+. .|..+..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~---~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~~~~~~~~l~~--- 278 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFG---AIPAQHHRYVGATVTEDDRFLLISAANS-TSGNRLYVKDLSQENAPLLTVQG--- 278 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEES---CSGGGCCSEEEEEECTTSCEEEEEEESS-SSCCEEEEEETTSTTCCCEEEEC---
T ss_pred CCcEEEEEECCCCcccceEEEe---cCCCCCeEEEEEEEcCCCCEEEEEEccC-CCCcEEEEEECCCCCCceEEEeC---
Confidence 345688888876542 22321 121 22233344445554443332211 12368999998766 6887752
Q ss_pred CCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCC---CceEEeecCCCCCCCceeeEEEEeCCEEEEE
Q 010770 174 VPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITSGGHYLLLF 250 (501)
Q Consensus 174 ~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t---~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~ 250 (501)
...... ......++.+|+........ ..+...|+.+ ..|+.+... ..... +....++.|++.
T Consensus 279 ~~~~~~-~~~~~~g~~l~~~t~~~~~~---------~~l~~~d~~~~~~~~~~~l~~~---~~~~~--~~s~~g~~lv~~ 343 (693)
T 3iuj_A 279 DLDADV-SLVDNKGSTLYLLTNRDAPN---------RRLVTVDAANPGPAHWRDLIPE---RQQVL--TVHSGSGYLFAE 343 (693)
T ss_dssp SSSSCE-EEEEEETTEEEEEECTTCTT---------CEEEEEETTSCCGGGCEEEECC---CSSCE--EEEEETTEEEEE
T ss_pred CCCceE-EEEeccCCEEEEEECCCCCC---------CEEEEEeCCCCCccccEEEecC---CCCEE--EEEEECCEEEEE
Confidence 111111 11334478999987653221 2334446654 358877622 11112 444567777665
Q ss_pred cCCCCCCCCcccccccCeEEEEEcCCCceEEcc
Q 010770 251 GGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (501)
Q Consensus 251 GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~ 283 (501)
.-.+ ....++++|+.......+.
T Consensus 344 ~~~~----------g~~~l~~~d~~g~~~~~l~ 366 (693)
T 3iuj_A 344 YMVD----------ATARVEQFDYEGKRVREVA 366 (693)
T ss_dssp EEET----------TEEEEEEECTTSCEEEEEC
T ss_pred EEEC----------CeeEEEEEECCCCeeEEee
Confidence 4322 2246889998876655554
No 106
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=94.36 E-value=3 Score=40.27 Aligned_cols=32 Identities=13% Similarity=0.131 Sum_probs=20.6
Q ss_pred cEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 130 AAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 130 ~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
.+++...++ +++.|+.++ .+.+||+.+.+-..
T Consensus 190 ~~~~~~~~~-~l~~~~~dg-----~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 190 TSVDISERG-LIATGFNNG-----TVQISELSTLRPLY 221 (397)
T ss_dssp CEEEECTTS-EEEEECTTS-----EEEEEETTTTEEEE
T ss_pred eEEEECCCc-eEEEEeCCC-----cEEEEECCCCceeE
Confidence 344555667 777776543 48899998776443
No 107
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=94.34 E-value=5.8 Score=41.32 Aligned_cols=121 Identities=12% Similarity=0.061 Sum_probs=65.3
Q ss_pred CcEEEEEcccCCCccCCceEEEEc-CCC--cEEeceecCCCCCCCCCC---CCcceeEEEEeCCEEEEEccccCCCCCCc
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDI-DNK--LWFQPECTGNGSNGQVGP---GPRAFHIAVAIDCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~l~~~~~~~~~~~~p---~~R~~h~~~~~~~~iyv~GG~~~~~~~~~ 103 (501)
++.||+.... ...++++|. .++ .|+.-..... ...+ +.......++.++.||+... ...
T Consensus 62 ~g~vyv~~~~-----~~~v~AlD~~~tG~~~W~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~ 126 (571)
T 2ad6_A 62 GDMMYVHSAF-----PNNTYALNLNDPGKIVWQHKPKQDA----STKAVMCCDVVDRGLAYGAGQIVKKQA------NGH 126 (571)
T ss_dssp TTEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG----GGGGGCTTCSCCCCCEEETTEEEEECT------TSE
T ss_pred CCEEEEEeCC-----CCEEEEEeCCCCccEEEEEcCCCCc----cccccccccccccccEEECCEEEEEeC------CCE
Confidence 4789998663 246999998 765 6876321100 0000 00111234556888888743 246
Q ss_pred EEEEECCCC--eEEEEecCCCCCCc-CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEc
Q 010770 104 FWVLDTDIW--QWSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (501)
Q Consensus 104 ~~~yd~~t~--~W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~ 168 (501)
++++|..++ .|+.-.. ..+.. ....+.++. ++.+|+-.+.........++.||..|.+ |+.-
T Consensus 127 l~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 193 (571)
T 2ad6_A 127 LLALDAKTGKINWEVEVC--DPKVGSTLTQAPFVA-KDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAF 193 (571)
T ss_dssp EEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred EEEEECCCCCEEEEecCC--CCCccceeccCCEEE-CCEEEEEecCCccCCCCEEEEEECCCCcEEEEEc
Confidence 999999887 4875431 11111 111222333 5588775432111123568999998765 7754
No 108
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=94.32 E-value=1.1 Score=48.41 Aligned_cols=215 Identities=11% Similarity=0.038 Sum_probs=108.3
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCC---------C
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS---------R 99 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~---------~ 99 (501)
.+++.++|+...++.....++++|+.+++....... ..+....+.+-+ +-++++..... .
T Consensus 172 PDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~----------~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 172 DDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELK----------WVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp TTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEE----------EEESCCCEESTT-SEEEEEECCCC--------CC
T ss_pred CCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCC----------CceeccEEEECC-CEEEEEEecCcccccccccCC
Confidence 345666665544333345799999999988654211 001111111123 33333332221 1
Q ss_pred CCCcEEEEECCCCeE--EEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC--c-eEEcccCCCC
Q 010770 100 RLGDFWVLDTDIWQW--SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL--E-WMQLPVTGSV 174 (501)
Q Consensus 100 ~~~~~~~yd~~t~~W--~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~--~-W~~~~~~~~~ 174 (501)
....++.++..+..- ..+.. ....+....+.....+++..++.........+.++.+|..+. . |..+.. .
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~---~ 315 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFA--TPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIP---D 315 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEEC---S
T ss_pred CCCEEEEEECCCCchhCEEEec--cCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecC---C
Confidence 245688888876542 22221 111122233444455665444444333223568999999887 6 888762 1
Q ss_pred CCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCC--CceEEeecCCCCCCCceeeEEEEeCCEEEEEcC
Q 010770 175 PPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET--PGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGG 252 (501)
Q Consensus 175 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t--~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG 252 (501)
...... .+...++.||+........ ..+..+|+.+ ..|+.+... .... -..+...++.+++...
T Consensus 316 ~~~~~~-~~~~dg~~l~~~s~~~~~~---------~~l~~~d~~~~~~~~~~l~~~---~~~~-l~~~~~~~~~lv~~~~ 381 (741)
T 1yr2_A 316 LKAQWD-FVDGVGDQLWFVSGDGAPL---------KKIVRVDLSGSTPRFDTVVPE---SKDN-LESVGIAGNRLFASYI 381 (741)
T ss_dssp SSSCEE-EEEEETTEEEEEECTTCTT---------CEEEEEECSSSSCEEEEEECC---CSSE-EEEEEEEBTEEEEEEE
T ss_pred CCceEE-EEeccCCEEEEEECCCCCC---------CEEEEEeCCCCccccEEEecC---CCCe-EEEEEEECCEEEEEEE
Confidence 111111 1223467788775442211 2345567776 579887621 1111 1223334777777664
Q ss_pred CCCCCCCcccccccCeEEEEEcCCCceEEcc
Q 010770 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKRLP 283 (501)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~ 283 (501)
.+. ...+|++++....-..+.
T Consensus 382 ~dg----------~~~l~~~~~~g~~~~~l~ 402 (741)
T 1yr2_A 382 HDA----------KSQVLAFDLDGKPAGAVS 402 (741)
T ss_dssp ETT----------EEEEEEEETTSCEEEECB
T ss_pred ECC----------EEEEEEEeCCCCceeecc
Confidence 332 356888887655444443
No 109
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=94.29 E-value=4 Score=39.26 Aligned_cols=165 Identities=13% Similarity=0.006 Sum_probs=76.3
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEE--cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcc
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCG 180 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~ 180 (501)
.+.++|+.+.+-...-. ..... ..+.... .++.+++.|+.++ .+..||+.+.+....- ..... .-
T Consensus 177 ~v~lwd~~~~~~~~~~~---~h~~~-v~~~~~~~~~~g~~l~sgs~Dg-----~v~~wd~~~~~~~~~~---~~h~~-~v 243 (354)
T 2pbi_B 177 TCALWDVESGQLLQSFH---GHGAD-VLCLDLAPSETGNTFVSGGCDK-----KAMVWDMRSGQCVQAF---ETHES-DV 243 (354)
T ss_dssp EEEEEETTTCCEEEEEE---CCSSC-EEEEEECCCSSCCEEEEEETTS-----CEEEEETTTCCEEEEE---CCCSS-CE
T ss_pred cEEEEeCCCCeEEEEEc---CCCCC-eEEEEEEeCCCCCEEEEEeCCC-----eEEEEECCCCcEEEEe---cCCCC-Ce
Confidence 46777887765433221 11111 1111121 2346777787654 3888998887754432 11111 11
Q ss_pred eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceee-EEEE-eCCEEEEEcCCCCCC
Q 010770 181 HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGH-TITS-GGHYLLLFGGHGTGG 257 (501)
Q Consensus 181 ~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~-s~~~-~~~~i~v~GG~~~~~ 257 (501)
.+++.. ++.+++.|+... .+..||+.+..-..+-. ........ +++. .++.+++.|+.+
T Consensus 244 ~~v~~~p~~~~l~s~s~D~------------~v~lwd~~~~~~~~~~~---~~~~~~~~~~~~~s~~g~~l~~g~~d--- 305 (354)
T 2pbi_B 244 NSVRYYPSGDAFASGSDDA------------TCRLYDLRADREVAIYS---KESIIFGASSVDFSLSGRLLFAGYND--- 305 (354)
T ss_dssp EEEEECTTSSEEEEEETTS------------CEEEEETTTTEEEEEEC---CTTCCSCEEEEEECTTSSEEEEEETT---
T ss_pred EEEEEeCCCCEEEEEeCCC------------eEEEEECCCCcEEEEEc---CCCcccceeEEEEeCCCCEEEEEECC---
Confidence 122222 456677776532 34456766654322221 11111111 2222 345666666543
Q ss_pred CCcccccccCeEEEEEcCCCce-EEcccCCCCCCcccceEEEEE-CCEEEEEccCCC
Q 010770 258 WLSRYDIYYNDTIILDRLSAQW-KRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (501)
Q Consensus 258 ~~~~~~~~~~~v~~yd~~~~~W-~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 312 (501)
..+.+||+.+..= ..+... ... -.+++.. ++..++.|+.++
T Consensus 306 ---------~~i~vwd~~~~~~~~~l~~h----~~~-v~~l~~spdg~~l~sgs~D~ 348 (354)
T 2pbi_B 306 ---------YTINVWDVLKGSRVSILFGH----ENR-VSTLRVSPDGTAFCSGSWDH 348 (354)
T ss_dssp ---------SCEEEEETTTCSEEEEECCC----SSC-EEEEEECTTSSCEEEEETTS
T ss_pred ---------CcEEEEECCCCceEEEEECC----CCc-EEEEEECCCCCEEEEEcCCC
Confidence 3588899866542 222111 011 1222222 566777777654
No 110
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=94.28 E-value=3.8 Score=38.94 Aligned_cols=227 Identities=12% Similarity=-0.004 Sum_probs=113.4
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECCCC--eEEEEecCC-
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIW--QWSELTSFG- 121 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~--~W~~~~~~~- 121 (501)
..+.++|+.+++....... ... ..-+..++. +++||+.... ...+.+||+... .-..+...+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~--------~~~-~~p~gia~d~~g~l~v~d~~-----~~~v~~~~~~g~~~~~~~~~~~~~ 134 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGK--------NLF-YLPHGLSIDTDGNYWVTDVA-----LHQVFKLDPHSKEGPLLILGRSMQ 134 (329)
T ss_dssp CCEEEECTTTCCEEEEECT--------TTC-SSEEEEEECTTSCEEEEETT-----TTEEEEECTTCSSCCSEEESBTTB
T ss_pred CcEEEEECCCCeEEeccCC--------Ccc-CCceEEEECCCCCEEEEECC-----CCEEEEEeCCCCeEEEEEecccCC
Confidence 3699999988876543211 011 112333333 5678887542 246889998765 222332100
Q ss_pred --CCCCcCCcc-EEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCC----CCCC-cceeEEEe-C-CEE
Q 010770 122 --DLPSPRDFA-AASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSV----PPPR-CGHTATMV-E-KRL 190 (501)
Q Consensus 122 --~~p~~r~~~-~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----p~~r-~~~~~~~~-~-~~l 190 (501)
..+...... .+++.. ++.||+..++. ...+.+||.....-..+...+.. +... .-+.+++. + +.|
T Consensus 135 ~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~----~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l 210 (329)
T 3fvz_A 135 PGSDQNHFCQPTDVAVEPSTGAVFVSDGYC----NSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQL 210 (329)
T ss_dssp CCCSTTCCSSEEEEEECTTTCCEEEEECSS----CCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEE
T ss_pred CCCCccccCCCcEEEEeCCCCeEEEEeCCC----CCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEE
Confidence 001111122 333333 67999997632 24588898654443333221111 1111 12344444 3 799
Q ss_pred EEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEE
Q 010770 191 LIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTI 270 (501)
Q Consensus 191 yv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (501)
||..... ..+.+||+.+.+....-.. ......-.+++...+.+|...|...-. +.....+.
T Consensus 211 ~v~d~~~------------~~I~~~~~~~G~~~~~~~~--~~~~~~~~~~~~~pg~~~~~~g~~~v~-----~~~~~~v~ 271 (329)
T 3fvz_A 211 CVADREN------------GRIQCFKTDTKEFVREIKH--ASFGRNVFAISYIPGFLFAVNGKPYFG-----DQEPVQGF 271 (329)
T ss_dssp EEEETTT------------TEEEEEETTTCCEEEEECC--TTTTTCEEEEEEETTEEEEEECCCCTT-----CSCCCCEE
T ss_pred EEEECCC------------CEEEEEECCCCcEEEEEec--cccCCCcceeeecCCEEEEeCCCEEec-----cCCCcEEE
Confidence 9986432 4566788886665443211 111122223444447777776643211 12345799
Q ss_pred EEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccC
Q 010770 271 ILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGF 310 (501)
Q Consensus 271 ~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~ 310 (501)
++|+.+.+....-.... ......+++++. ++.|||....
T Consensus 272 ~~~~~~g~~~~~~~~~~-~~~~~p~~ia~~~dG~lyvad~~ 311 (329)
T 3fvz_A 272 VMNFSSGEIIDVFKPVR-KHFDMPHDIVASEDGTVYIGDAH 311 (329)
T ss_dssp EEETTTCCEEEEECCSS-SCCSSEEEEEECTTSEEEEEESS
T ss_pred EEEcCCCeEEEEEcCCC-CccCCeeEEEECCCCCEEEEECC
Confidence 99988877655422110 111222344443 4688888643
No 111
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=94.10 E-value=2.5 Score=41.35 Aligned_cols=65 Identities=15% Similarity=0.182 Sum_probs=39.7
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++..++.|+.+ ..+.+||+.+.+-..... .....-.+++...++.+++.|+.++ .+.+||+.+.+
T Consensus 108 ~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~----~h~~~v~~~~~~~~~~~l~s~s~d~-----~i~iwd~~~~~ 172 (420)
T 3vl1_A 108 QMRRFILGTTE-----GDIKVLDSNFNLQREIDQ----AHVSEITKLKFFPSGEALISSSQDM-----QLKIWSVKDGS 172 (420)
T ss_dssp SSCEEEEEETT-----SCEEEECTTSCEEEEETT----SSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTTCC
T ss_pred CCCEEEEEECC-----CCEEEEeCCCcceeeecc----cccCccEEEEECCCCCEEEEEeCCC-----eEEEEeCCCCc
Confidence 66777887654 358889988776544321 1122223344445667777777543 48889987654
No 112
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.04 E-value=7.1 Score=41.95 Aligned_cols=108 Identities=9% Similarity=-0.083 Sum_probs=55.9
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++..++.|+.+ ..+.+||..+++....-.. ........+..-++..++.|+.+ ..+.+||
T Consensus 65 ~~~~~l~~~~~d-----g~i~vw~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~~~~~d-----g~i~vw~ 125 (814)
T 3mkq_A 65 ARKNWIIVGSDD-----FRIRVFNYNTGEKVVDFEA---------HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWN 125 (814)
T ss_dssp GGGTEEEEEETT-----SEEEEEETTTCCEEEEEEC---------CSSCEEEEEECSSSSEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCcEEEEEec---------CCCCEEEEEEeCCCCEEEEEcCC-----CEEEEEE
Confidence 334555565542 4588899888776443211 11111112222245555566533 3588889
Q ss_pred CCCC-eEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 109 TDIW-QWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 109 ~~t~-~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
..++ ....... . ......+++... ++.+++.|+.++ .+.+||+.+.+
T Consensus 126 ~~~~~~~~~~~~---~-~~~~v~~~~~~p~~~~~l~~~~~dg-----~v~vwd~~~~~ 174 (814)
T 3mkq_A 126 WENNWALEQTFE---G-HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQST 174 (814)
T ss_dssp GGGTSEEEEEEE---C-CSSCEEEEEEETTEEEEEEEEETTS-----EEEEEETTCSS
T ss_pred CCCCceEEEEEc---C-CCCcEEEEEEEcCCCCEEEEEeCCC-----eEEEEECCCCc
Confidence 8776 3333221 1 111122333344 567888887653 48888886554
No 113
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=94.04 E-value=5.3 Score=39.66 Aligned_cols=178 Identities=13% Similarity=0.005 Sum_probs=92.0
Q ss_pred EeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 84 AIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 84 ~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
..++.+++.|+.+ ..+.+||..+.+-...-. . ....-.+++...++..++.|+.++ .+.+||+.+.
T Consensus 277 ~~~~~~l~~~~~d-----~~i~vwd~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~l~sg~~dg-----~i~vwd~~~~ 342 (464)
T 3v7d_B 277 SGHGNIVVSGSYD-----NTLIVWDVAQMKCLYILS---G-HTDRIYSTIYDHERKRCISASMDT-----TIRIWDLENG 342 (464)
T ss_dssp EEETTEEEEEETT-----SCEEEEETTTTEEEEEEC---C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTT
T ss_pred cCCCCEEEEEeCC-----CeEEEEECCCCcEEEEec---C-CCCCEEEEEEcCCCCEEEEEeCCC-----cEEEEECCCC
Confidence 3345566666644 358899998876544321 1 112223444455666777777654 4889999877
Q ss_pred ceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe
Q 010770 164 EWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG 243 (501)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~ 243 (501)
+-...- .........+..++..++.|+.. ..+..||+.+..-..... ........+...
T Consensus 343 ~~~~~~-----~~h~~~v~~~~~~~~~l~s~s~d------------g~v~vwd~~~~~~~~~~~----~~~~~~~~~~~~ 401 (464)
T 3v7d_B 343 ELMYTL-----QGHTALVGLLRLSDKFLVSAAAD------------GSIRGWDANDYSRKFSYH----HTNLSAITTFYV 401 (464)
T ss_dssp EEEEEE-----CCCSSCEEEEEECSSEEEEEETT------------SEEEEEETTTCCEEEEEE----CTTCCCEEEEEE
T ss_pred cEEEEE-----eCCCCcEEEEEEcCCEEEEEeCC------------CcEEEEECCCCceeeeec----CCCCccEEEEEe
Confidence 644321 11112223334456666666653 234566776654322221 111122233345
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCC
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 312 (501)
++.+++.|+ + +.+.+||+.+.+-....... ....-.+++..++.+++.++.++
T Consensus 402 ~~~~l~~~~-d------------g~i~iwd~~~g~~~~~~~~~---~~~~v~~v~~~~~~l~~~~~~~g 454 (464)
T 3v7d_B 402 SDNILVSGS-E------------NQFNIYNLRSGKLVHANILK---DADQIWSVNFKGKTLVAAVEKDG 454 (464)
T ss_dssp CSSEEEEEE-T------------TEEEEEETTTCCEEESCTTT---TCSEEEEEEEETTEEEEEEEETT
T ss_pred CCCEEEEec-C------------CeEEEEECCCCcEEehhhcc---CCCcEEEEEecCCEEEEEEEeCC
Confidence 666666665 2 35899999887654422211 12222334444666666665443
No 114
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=94.03 E-value=0.91 Score=43.50 Aligned_cols=71 Identities=10% Similarity=0.058 Sum_probs=42.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE-cC--cEEEEEecCCCCcccccEEEEECCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
++..++.|+.+ ..+.+||....++..+.. +......-.++.+ .+ +.+++.|+.++ .+.+||+.+
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~ 88 (379)
T 3jrp_A 22 YGKRLATCSSD-----KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEEN 88 (379)
T ss_dssp SSSEEEEEETT-----SCEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEEET
T ss_pred CCCEEEEEECC-----CcEEEEecCCCcceeeeE---ecCCCCcEEEEEeCCCCCCCEEEEeccCC-----EEEEEEcCC
Confidence 45666677644 347888887667766543 2111122222333 22 57777777654 488899999
Q ss_pred CceEEcc
Q 010770 163 LEWMQLP 169 (501)
Q Consensus 163 ~~W~~~~ 169 (501)
.+|..+.
T Consensus 89 ~~~~~~~ 95 (379)
T 3jrp_A 89 GRWSQIA 95 (379)
T ss_dssp TEEEEEE
T ss_pred CceeEee
Confidence 9887665
No 115
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=94.01 E-value=1.5 Score=46.16 Aligned_cols=205 Identities=14% Similarity=-0.006 Sum_probs=102.6
Q ss_pred CCceEEEEcC--C-CcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccC-----CCCCCcEEEEECCC-----
Q 010770 45 LSDVVVYDID--N-KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG-----SRRLGDFWVLDTDI----- 111 (501)
Q Consensus 45 ~~~v~~yd~~--t-~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~-----~~~~~~~~~yd~~t----- 111 (501)
...+|.++.. . +.-..+..... .....+....+..-+++.+++..... .....+++++|..+
T Consensus 101 ~~~l~~~~~~~~g~~~~~~l~~~~~-----~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 175 (662)
T 3azo_A 101 DQRLYAFEPDAPGGAVPRPLTPVSA-----VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAAD 175 (662)
T ss_dssp TCCEEEECTTSTTCCCCEECSCCCC-----STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTC
T ss_pred CCeEEEEcCCCCCCCCCEeccCCcc-----CCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCcccc
Confidence 3568999887 3 55555542100 00112233333334555444444321 12235799999988
Q ss_pred -CeEEEEe-cCCCCCCcCCccEEEEEcCcEEEEEecCCCCc---ccccEEEEECC-CC---ceEEcccCCCCCCCCccee
Q 010770 112 -WQWSELT-SFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---WLSDVYVLDTI-SL---EWMQLPVTGSVPPPRCGHT 182 (501)
Q Consensus 112 -~~W~~~~-~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~~~~~~~yd~~-t~---~W~~~~~~~~~p~~r~~~~ 182 (501)
.+...+. . ........+...|++.+++...+... ....++++|+. +. +...+.. -. ...-..
T Consensus 176 ~~~~~~l~~~-----~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~---~~-~~~~~~ 246 (662)
T 3azo_A 176 RSAVRELSDD-----AHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG---GP-EEAIAQ 246 (662)
T ss_dssp GGGSEESSCS-----CSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE---ET-TBCEEE
T ss_pred CCceeEEEec-----CCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC---CC-CceEcc
Confidence 6655553 2 11122233344566555544433211 23579999998 56 4444431 00 111122
Q ss_pred EEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCC-C--CCCce-eeEEEE-eCCEEEEEcCCCCC
Q 010770 183 ATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQ-A--PSSRC-GHTITS-GGHYLLLFGGHGTG 256 (501)
Q Consensus 183 ~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~-~--p~~r~-~~s~~~-~~~~i~v~GG~~~~ 256 (501)
.... ++++|+.+...+. ..++.+|+.+.+++.+..... . |.-.. ..+++. -++++++.+.. .
T Consensus 247 ~~~spdg~l~~~~~~~~~----------~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~- 314 (662)
T 3azo_A 247 AEWAPDGSLIVATDRTGW----------WNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G- 314 (662)
T ss_dssp EEECTTSCEEEEECTTSS----------CEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S-
T ss_pred eEECCCCeEEEEECCCCC----------eEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C-
Confidence 3322 5677766654321 245666888888887752110 0 10000 112333 35666666643 2
Q ss_pred CCCcccccccCeEEEEEcCCCceEEccc
Q 010770 257 GWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
...+|.+|+.+.....+..
T Consensus 315 ---------~~~l~~~d~~~~~~~~l~~ 333 (662)
T 3azo_A 315 ---------AAVLGILDPESGELVDAAG 333 (662)
T ss_dssp ---------SCEEEEEETTTTEEEECCS
T ss_pred ---------ccEEEEEECCCCcEEEecC
Confidence 2578999998888777654
No 116
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=93.97 E-value=0.62 Score=45.22 Aligned_cols=209 Identities=11% Similarity=-0.002 Sum_probs=96.0
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCE-EEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCH-MFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 123 (501)
..++++|+.+++...+... .....+....- ++. |++............++.+|..+..+..+.. ..
T Consensus 168 ~~l~~~d~~~g~~~~~~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~--~~ 235 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQD----------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE--HA 235 (396)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC--CC
T ss_pred ceEEEEECCCCcEEeeccC----------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec--cC
Confidence 4689999999887776521 11222333333 344 4443321111122579999998887776642 10
Q ss_pred CCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCc
Q 010770 124 PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPI 202 (501)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~ 202 (501)
+ .......+...+++.+++...........++++|+.+.+...+. ..+. .. ....- +++++++.+....-..
T Consensus 236 ~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~---~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~ 308 (396)
T 3c5m_A 236 E-GESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM---VMPP--CS-HLMSNFDGSLMVGDGCDAPVDV 308 (396)
T ss_dssp T-TEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE---ECCS--EE-EEEECSSSSEEEEEECCC----
T ss_pred C-CccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee---eCCC--CC-CCccCCCCceEEEecCCcceee
Confidence 1 11112233334555333433222222234999999998877765 2221 11 22222 5666665442100000
Q ss_pred cc----ccccccccccccCCCCceEEeecCCCCC------CC-ceeeEEEEeCC-EEEEEcCCCCCCCCcccccccCeEE
Q 010770 203 MG----DLWALKGLIEEENETPGWTQLKLPGQAP------SS-RCGHTITSGGH-YLLLFGGHGTGGWLSRYDIYYNDTI 270 (501)
Q Consensus 203 ~~----d~~~l~~~~~Yd~~t~~W~~~~~~g~~p------~~-r~~~s~~~~~~-~i~v~GG~~~~~~~~~~~~~~~~v~ 270 (501)
.+ ....-..++.+|+.+.....+....... .. ...+....-++ .|+....... ...+|
T Consensus 309 ~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~----------~~~l~ 378 (396)
T 3c5m_A 309 ADADSYNIENDPFLYVLNTKAKSAQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEG----------VPAIY 378 (396)
T ss_dssp ------CCCCCCEEEEEETTTTBCCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTS----------SCEEE
T ss_pred ccccccccCCCCcEEEEecccCceEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCC----------CceEE
Confidence 00 0000134566688887776665221100 00 01111122233 5554443221 24689
Q ss_pred EEEcCCCceEEcc
Q 010770 271 ILDRLSAQWKRLP 283 (501)
Q Consensus 271 ~yd~~~~~W~~v~ 283 (501)
.+|+.+..++.+.
T Consensus 379 ~~~~~~~~~~~~~ 391 (396)
T 3c5m_A 379 IADVPESYKHLEH 391 (396)
T ss_dssp EEECCTTCC----
T ss_pred EEEEccccccccc
Confidence 9998888776654
No 117
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=93.93 E-value=0.57 Score=45.53 Aligned_cols=123 Identities=11% Similarity=0.025 Sum_probs=51.0
Q ss_pred ECCcEEEEEcccCCCcc-CCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEE
Q 010770 28 IGKSKVVVFGGLVDKRF-LSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~-~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~ 105 (501)
..++++++.|+.+.... -..+++|+..+..-....... .....-.-.+++.. ++.++ .|+.+ ..+.
T Consensus 51 SpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~------~~~~~~~V~~~~~s~d~~~l-~~s~d-----g~v~ 118 (357)
T 4g56_B 51 RRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTA------GVQTEAGVTDVAWVSEKGIL-VASDS-----GAVE 118 (357)
T ss_dssp CSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSE------EEECSSCEEEEEEETTTEEE-EEETT-----SCEE
T ss_pred CCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecc------cCCCCCCEEEEEEcCCCCEE-EEECC-----CEEE
Confidence 35577888777543221 234677776554321100000 00000011222333 45544 45433 2577
Q ss_pred EEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
++|+.+++-..............-.+++...++..++.|+.++ .+.+||..+.+-..
T Consensus 119 lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg-----~v~iwd~~~~~~~~ 175 (357)
T 4g56_B 119 LWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDF-----SVKVWDLSQKAVLK 175 (357)
T ss_dssp EC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTS-----CEEEEETTTTEEEE
T ss_pred EeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCCCcEEE
Confidence 8887765432211000000111122334445667788887654 37889988876543
No 118
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=93.93 E-value=3.4 Score=40.34 Aligned_cols=113 Identities=12% Similarity=0.044 Sum_probs=60.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEE-----eceecCCCCCCCCCCCCcceeEEEEe-CC-EEEEEccccCCCCCC
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWF-----QPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLG 102 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~-----~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~ 102 (501)
++.+++.|+.+ ..+.+||..++... .+.... ... ..-.+++.. ++ .+++.|+.+ .
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~~~-------~h~-~~v~~~~~~p~~~~~l~s~~~d-----g 154 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVITLE-------GHT-KRVGIVAWHPTAQNVLLSAGCD-----N 154 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEEEE-------CCS-SCEEEEEECSSBTTEEEEEETT-----S
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEEec-------CCC-CeEEEEEECcCCCCEEEEEcCC-----C
Confidence 45677777643 34888888876442 111110 011 111222222 33 577777654 3
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
.+.++|+.+++....-.. ......-.+++...++.+++.|+.+ ..+.+||+.+.+-..
T Consensus 155 ~i~iwd~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~ 212 (402)
T 2aq5_A 155 VILVWDVGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSCRD-----KRVRVIEPRKGTVVA 212 (402)
T ss_dssp CEEEEETTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEETT-----SEEEEEETTTTEEEE
T ss_pred EEEEEECCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEecC-----CcEEEEeCCCCceee
Confidence 588999998876543210 0111122334444566777777754 358899998876443
No 119
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=93.92 E-value=3.6 Score=38.59 Aligned_cols=133 Identities=9% Similarity=0.014 Sum_probs=70.6
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCC-EEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDC-HMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~-~iyv~GG~~~~~~~~~~~~y 107 (501)
.+.+|+.++.+ ..+.+||+.+++....... +. ....++. -++ .+|+.+... ..++++
T Consensus 9 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~~---------~~--~~~~~~~s~dg~~l~~~~~~~-----~~i~~~ 67 (331)
T 3u4y_A 9 SNFGIVVEQHL-----RRISFFSTDTLEILNQITL---------GY--DFVDTAITSDCSNVVVTSDFC-----QTLVQI 67 (331)
T ss_dssp CCEEEEEEGGG-----TEEEEEETTTCCEEEEEEC---------CC--CEEEEEECSSSCEEEEEESTT-----CEEEEE
T ss_pred CCEEEEEecCC-----CeEEEEeCcccceeeeEEc---------cC--CcceEEEcCCCCEEEEEeCCC-----CeEEEE
Confidence 35778776542 4699999999988665432 11 1112222 244 577765422 379999
Q ss_pred ECCCCeE-EEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEE
Q 010770 108 DTDIWQW-SELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (501)
Q Consensus 108 d~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (501)
|+.+++. ......+. . ..++++...++ .+| .+...+ ....+++||+.+.+....-.. ....+.++.
T Consensus 68 d~~~~~~~~~~~~~~~--~--~~~~~~~s~dg~~l~-~~~~~~--~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~ 135 (331)
T 3u4y_A 68 ETQLEPPKVVAIQEGQ--S--SMADVDITPDDQFAV-TVTGLN--HPFNMQSYSFLKNKFISTIPI-----PYDAVGIAI 135 (331)
T ss_dssp ECSSSSCEEEEEEECS--S--CCCCEEECTTSSEEE-ECCCSS--SSCEEEEEETTTTEEEEEEEC-----CTTEEEEEE
T ss_pred ECCCCceeEEecccCC--C--CccceEECCCCCEEE-EecCCC--CcccEEEEECCCCCeEEEEEC-----CCCccceEE
Confidence 9988874 22222111 1 12224444444 566 332211 112699999998876554321 111244444
Q ss_pred e-CC-EEEEEcc
Q 010770 186 V-EK-RLLIYGG 195 (501)
Q Consensus 186 ~-~~-~lyv~GG 195 (501)
. ++ .+|+.+.
T Consensus 136 spdg~~l~~~~~ 147 (331)
T 3u4y_A 136 SPNGNGLILIDR 147 (331)
T ss_dssp CTTSSCEEEEEE
T ss_pred CCCCCEEEEEec
Confidence 4 34 5777654
No 120
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=93.89 E-value=5.1 Score=38.99 Aligned_cols=109 Identities=9% Similarity=-0.003 Sum_probs=58.2
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++..++.|+.+ ..+.+||+.++.-...-. .....-.+++.. ++.+++.|+.+ ..+.+|
T Consensus 107 ~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~----------~h~~~v~~~~~~~~~~~l~s~s~d-----~~i~iw 166 (420)
T 3vl1_A 107 LQMRRFILGTTE-----GDIKVLDSNFNLQREIDQ----------AHVSEITKLKFFPSGEALISSSQD-----MQLKIW 166 (420)
T ss_dssp SSSCEEEEEETT-----SCEEEECTTSCEEEEETT----------SSSSCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred cCCCEEEEEECC-----CCEEEEeCCCcceeeecc----------cccCccEEEEECCCCCEEEEEeCC-----CeEEEE
Confidence 345667777643 357888888765433210 111112223333 55666677643 358889
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
|+.+.+-...-. . ....-.+++...++..++.|+.++ .+.+||+.+.+-.
T Consensus 167 d~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~s~~~d~-----~v~iwd~~~~~~~ 216 (420)
T 3vl1_A 167 SVKDGSNPRTLI---G-HRATVTDIAIIDRGRNVLSASLDG-----TIRLWECGTGTTI 216 (420)
T ss_dssp ETTTCCCCEEEE---C-CSSCEEEEEEETTTTEEEEEETTS-----CEEEEETTTTEEE
T ss_pred eCCCCcCceEEc---C-CCCcEEEEEEcCCCCEEEEEcCCC-----cEEEeECCCCcee
Confidence 987654222111 0 111223344455667777777654 3788888876543
No 121
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=93.87 E-value=4.1 Score=37.85 Aligned_cols=200 Identities=9% Similarity=0.034 Sum_probs=96.4
Q ss_pred EEEECC-cEEEEEcccCCCccCCceEEEEcCCCcEEec-eecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccC----
Q 010770 25 AVNIGK-SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQP-ECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFG---- 97 (501)
Q Consensus 25 ~~~~~~-~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l-~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~---- 97 (501)
++...+ +.+|+.... +.+++||+. ++...+ ..... ..+..+ -+.++. -++++|+......
T Consensus 76 i~~~~~~g~l~v~~~~------~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~-~~~i~~d~~g~l~v~~~~~~~~~~ 142 (314)
T 1pjx_A 76 CQCDRDANQLFVADMR------LGLLVVQTD-GTFEEIAKKDSE-----GRRMQG-CNDCAFDYEGNLWITAPAGEVAPA 142 (314)
T ss_dssp EEECSSSSEEEEEETT------TEEEEEETT-SCEEECCSBCTT-----SCBCBC-CCEEEECTTSCEEEEECBCBCTTS
T ss_pred EEEecCCCcEEEEECC------CCEEEEeCC-CCEEEEEeccCC-----CccccC-CcCEEECCCCCEEEEecCcccccc
Confidence 333355 678886541 258999998 776654 32110 111111 223333 3568887654221
Q ss_pred ------CCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE----cCc-EEEEEecCCCCcccccEEEEECC-CCce
Q 010770 98 ------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI----GNR-KIVMYGGWDGKKWLSDVYVLDTI-SLEW 165 (501)
Q Consensus 98 ------~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~----~~~-~iyv~GG~~~~~~~~~~~~yd~~-t~~W 165 (501)
......++++|+. .+...+... .. .....+.. .++ .+|+.... .+.+++||+. +.+.
T Consensus 143 ~~~~~~~~~~~~l~~~~~~-g~~~~~~~~--~~---~~~~i~~~~~~d~dg~~l~v~~~~-----~~~i~~~~~~~~g~~ 211 (314)
T 1pjx_A 143 DYTRSMQEKFGSIYCFTTD-GQMIQVDTA--FQ---FPNGIAVRHMNDGRPYQLIVAETP-----TKKLWSYDIKGPAKI 211 (314)
T ss_dssp CCCBTTSSSCEEEEEECTT-SCEEEEEEE--ES---SEEEEEEEECTTSCEEEEEEEETT-----TTEEEEEEEEETTEE
T ss_pred cccccccCCCCeEEEECCC-CCEEEeccC--CC---CcceEEEecccCCCCCEEEEEECC-----CCeEEEEECCCCCcc
Confidence 1112468999987 665554321 11 11334444 555 56766432 2458888876 4443
Q ss_pred EEcccCCCCCCC--CcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCce-EEeecCCCCCCCceeeEEE
Q 010770 166 MQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW-TQLKLPGQAPSSRCGHTIT 241 (501)
Q Consensus 166 ~~~~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W-~~~~~~g~~p~~r~~~s~~ 241 (501)
.........+.. ..-..++.. ++.+|+..... ..+.+||+.+.+. ..+. .+. ..-.+++
T Consensus 212 ~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~------------~~i~~~d~~~g~~~~~~~----~~~-~~~~~i~ 274 (314)
T 1pjx_A 212 ENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGS------------SHIEVFGPDGGQPKMRIR----CPF-EKPSNLH 274 (314)
T ss_dssp EEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETT------------TEEEEECTTCBSCSEEEE----CSS-SCEEEEE
T ss_pred ccceEEEECCCCCCCCCCceEECCCCCEEEEEcCC------------CEEEEEcCCCCcEeEEEe----CCC-CCceeEE
Confidence 221100011111 111223333 56788864221 3456678874433 3333 121 1222333
Q ss_pred E-eCC-EEEEEcCCCCCCCCcccccccCeEEEEEcCCC
Q 010770 242 S-GGH-YLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 242 ~-~~~-~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
. -++ .||+..... +.+++|++...
T Consensus 275 ~~~dg~~l~v~~~~~------------~~l~~~~~~~~ 300 (314)
T 1pjx_A 275 FKPQTKTIFVTEHEN------------NAVWKFEWQRN 300 (314)
T ss_dssp ECTTSSEEEEEETTT------------TEEEEEECSSC
T ss_pred ECCCCCEEEEEeCCC------------CeEEEEeCCCC
Confidence 3 233 477755321 46899998754
No 122
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.85 E-value=3.2 Score=42.74 Aligned_cols=232 Identities=10% Similarity=-0.012 Sum_probs=102.8
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCC------cEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCC
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK------LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~------~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~ 102 (501)
++..++.|+.+ ..+.+||..++ ....+.... ..... -.+++. -++..++.+|.... ...
T Consensus 77 ~~~~l~s~~~d-----g~v~vw~~~~~~~~~~~~~~~~~~~~-------~~~~~-v~~~~~s~~~~~l~~~~~~~~-~~~ 142 (615)
T 1pgu_A 77 GSQYLCSGDES-----GKVIVWGWTFDKESNSVEVNVKSEFQ-------VLAGP-ISDISWDFEGRRLCVVGEGRD-NFG 142 (615)
T ss_dssp TCCEEEEEETT-----SEEEEEEEEEEGGGTEEEEEEEEEEE-------CCSSC-EEEEEECTTSSEEEEEECCSS-CSE
T ss_pred CCCEEEEecCC-----CEEEEEeCCCCcccccccccccchhh-------ccccc-EEEEEEeCCCCEEEEeccCCC-Ccc
Confidence 56677777653 34777777644 333332211 01111 222222 24555666654321 134
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCC-cc
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR-CG 180 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r-~~ 180 (501)
.++.+| +.+-...- ......-.+++...++. +++.|+.+ ..+.+||..+.+-...- . ...... .-
T Consensus 143 ~v~~~d--~~~~~~~~----~~~~~~v~~~~~~~~~~~~l~~~~~d-----~~v~vwd~~~~~~~~~~-~-~~~~~~~~v 209 (615)
T 1pgu_A 143 VFISWD--SGNSLGEV----SGHSQRINACHLKQSRPMRSMTVGDD-----GSVVFYQGPPFKFSASD-R-THHKQGSFV 209 (615)
T ss_dssp EEEETT--TCCEEEEC----CSCSSCEEEEEECSSSSCEEEEEETT-----TEEEEEETTTBEEEEEE-C-SSSCTTCCE
T ss_pred EEEEEE--CCCcceee----ecCCccEEEEEECCCCCcEEEEEeCC-----CcEEEEeCCCcceeeee-c-ccCCCCceE
Confidence 566666 33221111 11111222333344443 67777654 34788887776544322 1 111100 11
Q ss_pred eeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCC
Q 010770 181 HTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGW 258 (501)
Q Consensus 181 ~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~ 258 (501)
.++... + +..++.|+.. ..+..||+.+.+....-..........-.+++..++..++.|+.+
T Consensus 210 ~~~~~~~~~~~~l~~~~~d------------g~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d---- 273 (615)
T 1pgu_A 210 RDVEFSPDSGEFVITVGSD------------RKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGAD---- 273 (615)
T ss_dssp EEEEECSTTCCEEEEEETT------------CCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETT----
T ss_pred EEEEECCCCCCEEEEEeCC------------CeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCC----
Confidence 223333 4 6677777653 234566776665433220000011111122222256666666543
Q ss_pred CcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCC
Q 010770 259 LSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~ 312 (501)
..+.+||+.+..-...-.....+......+++..++..++.|+.++
T Consensus 274 --------~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g 319 (615)
T 1pgu_A 274 --------ATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDG 319 (615)
T ss_dssp --------SEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTS
T ss_pred --------CcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCC
Confidence 3588899887654433222111111222233333566666776655
No 123
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=93.74 E-value=2.6 Score=40.68 Aligned_cols=112 Identities=13% Similarity=-0.021 Sum_probs=56.7
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCc----EEeceecCCCCCCCCCCCCcceeEEEEeC----C---EEEEEc
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL----WFQPECTGNGSNGQVGPGPRAFHIAVAID----C---HMFIFG 93 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~----W~~l~~~~~~~~~~~~p~~R~~h~~~~~~----~---~iyv~G 93 (501)
.+.... .+++.|+.+ ..+.+||..+.. +..+.... .........+..-+ + .+++.|
T Consensus 21 ~~~~~~-~~l~s~~~d-----g~i~iw~~~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 21 SVSACN-SFTVSCSGD-----GYLKVWDNKLLDNENPKDKSYSHF-------VHKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp EEEECS-SEEEEEETT-----SEEEEEESBCCTTCCGGGGEEEEE-------CCTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred EEEecC-CeEEEEcCC-----CEEEEEECCCcccccCCCcceEEe-------cCCCcEEEEEEecccccCCccccEEEEE
Confidence 333453 566666643 358888988776 22111110 01111122222234 5 777777
Q ss_pred cccCCCCCCcEEEEECCCCe------EEEEecCCCCCC---cCCccEEEEE----cCcEE-EEEecCCCCcccccEEEEE
Q 010770 94 GRFGSRRLGDFWVLDTDIWQ------WSELTSFGDLPS---PRDFAAASAI----GNRKI-VMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 94 G~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~p~---~r~~~~~~~~----~~~~i-yv~GG~~~~~~~~~~~~yd 159 (501)
+.+ ..+.+||..+.+ +..+.. .+. ...-.+++.. .++.. ++.|+.++ .+.+||
T Consensus 88 ~~d-----g~i~iw~~~~~~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd 154 (397)
T 1sq9_A 88 SFS-----GDLLFYRITREDETKKVIFEKLDL---LDSDMKKHSFWALKWGASNDRLLSHRLVATDVKG-----TTYIWK 154 (397)
T ss_dssp ETT-----SCEEEEEEEECTTTCCEEEEEECC---SCTTGGGSCEEEEEEECCC----CEEEEEEETTS-----CEEEEE
T ss_pred cCC-----CCEEEEEccCCcccccccceeecc---cccccCCCcEEEEEEeeccCCCCceEEEEEeCCC-----cEEEEe
Confidence 654 357888877666 666642 111 1223344444 45566 77777653 477777
Q ss_pred CCC
Q 010770 160 TIS 162 (501)
Q Consensus 160 ~~t 162 (501)
+.+
T Consensus 155 ~~~ 157 (397)
T 1sq9_A 155 FHP 157 (397)
T ss_dssp EES
T ss_pred CCc
Confidence 765
No 124
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=93.70 E-value=2.4 Score=42.07 Aligned_cols=178 Identities=10% Similarity=0.095 Sum_probs=89.1
Q ss_pred EEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC
Q 010770 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
++..++..++.|+.+ ..+.+||..+.+-...-. .....-.++.. ++.+++.|+.++ .+.+||..
T Consensus 138 ~~~~d~~~l~~g~~d-----g~i~iwd~~~~~~~~~~~-----~h~~~v~~l~~-~~~~l~sg~~dg-----~i~vwd~~ 201 (435)
T 1p22_A 138 CLQYDDQKIVSGLRD-----NTIKIWDKNTLECKRILT-----GHTGSVLCLQY-DERVIITGSSDS-----TVRVWDVN 201 (435)
T ss_dssp EEECCSSEEEEEESS-----SCEEEEESSSCCEEEEEC-----CCSSCEEEEEC-CSSEEEEEETTS-----CEEEEESS
T ss_pred EEEECCCEEEEEeCC-----CeEEEEeCCCCeEEEEEc-----CCCCcEEEEEE-CCCEEEEEcCCC-----eEEEEECC
Confidence 444577777787754 358899998876544321 11112223333 557778887654 48889988
Q ss_pred CCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEe-e-cCCCCCCCceeeE
Q 010770 162 SLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL-K-LPGQAPSSRCGHT 239 (501)
Q Consensus 162 t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~-~-~~g~~p~~r~~~s 239 (501)
+.+-...- .........+..++..++.|+..+ .+..||+.+..-... . ..+ .. ..-.+
T Consensus 202 ~~~~~~~~-----~~h~~~v~~l~~~~~~l~s~s~dg------------~i~vwd~~~~~~~~~~~~~~~-~~--~~v~~ 261 (435)
T 1p22_A 202 TGEMLNTL-----IHHCEAVLHLRFNNGMMVTCSKDR------------SIAVWDMASPTDITLRRVLVG-HR--AAVNV 261 (435)
T ss_dssp SCCEEEEE-----CCCCSCEEEEECCTTEEEEEETTS------------CEEEEECSSSSCCEEEEEECC-CS--SCEEE
T ss_pred CCcEEEEE-----cCCCCcEEEEEEcCCEEEEeeCCC------------cEEEEeCCCCCCceeeeEecC-CC--CcEEE
Confidence 87654332 111112223333455666666532 344556655432111 1 011 11 11112
Q ss_pred EEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEccCCCC
Q 010770 240 ITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (501)
Q Consensus 240 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 313 (501)
+.. ++..++.|+.+ ..+.+||+.+..-...-... .....++..++.+++.|+.++.
T Consensus 262 ~~~-~~~~l~s~~~d------------g~i~vwd~~~~~~~~~~~~~-----~~~v~~~~~~~~~l~~g~~dg~ 317 (435)
T 1p22_A 262 VDF-DDKYIVSASGD------------RTIKVWNTSTCEFVRTLNGH-----KRGIACLQYRDRLVVSGSSDNT 317 (435)
T ss_dssp EEE-ETTEEEEEETT------------SEEEEEETTTCCEEEEEECC-----SSCEEEEEEETTEEEEEETTSC
T ss_pred EEe-CCCEEEEEeCC------------CeEEEEECCcCcEEEEEcCC-----CCcEEEEEeCCCEEEEEeCCCe
Confidence 223 44455555543 45889998876533222111 1112333345667777876653
No 125
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=93.54 E-value=4.1 Score=38.14 Aligned_cols=101 Identities=11% Similarity=0.043 Sum_probs=49.8
Q ss_pred CceEEEEcC--CCcEEeceecCCCCCCCCCCCCcceeEEEEeCC-EEEEEccccCCCCCCcEEEEECCCCe-EEEEecCC
Q 010770 46 SDVVVYDID--NKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLDTDIWQ-WSELTSFG 121 (501)
Q Consensus 46 ~~v~~yd~~--t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~~~~~ 121 (501)
..+.+|++. ++++..+..... +. ...+.+..-++ .||+.+.. ...+.+||+.... ...+..
T Consensus 60 ~~v~~~~~~~~~~~~~~~~~~~~-------~~-~~~~~~~s~dg~~l~~~~~~-----~~~i~~~d~~~~~~~~~~~~-- 124 (343)
T 1ri6_A 60 FRVLAYRIAPDDGALTFAAESAL-------PG-SLTHISTDHQGQFVFVGSYN-----AGNVSVTRLEDGLPVGVVDV-- 124 (343)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEC-------SS-CCSEEEECTTSSEEEEEETT-----TTEEEEEEEETTEEEEEEEE--
T ss_pred CeEEEEEecCCCCceeecccccc-------CC-CCcEEEEcCCCCEEEEEecC-----CCeEEEEECCCCcccccccc--
Confidence 457777776 778876654321 11 11222222234 46665432 2357888874322 222222
Q ss_pred CCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCC-CceEE
Q 010770 122 DLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTIS-LEWMQ 167 (501)
Q Consensus 122 ~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t-~~W~~ 167 (501)
.+.....++++...++ .+|+.+.. ...+.+||+.+ .+...
T Consensus 125 -~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~v~~~d~~~~~~~~~ 166 (343)
T 1ri6_A 125 -VEGLDGCHSANISPDNRTLWVPALK-----QDRICLFTVSDDGHLVA 166 (343)
T ss_dssp -ECCCTTBCCCEECTTSSEEEEEEGG-----GTEEEEEEECTTSCEEE
T ss_pred -ccCCCCceEEEECCCCCEEEEecCC-----CCEEEEEEecCCCceee
Confidence 1122223344444444 57666522 23588999887 66653
No 126
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=93.54 E-value=5.3 Score=38.01 Aligned_cols=222 Identities=11% Similarity=0.002 Sum_probs=102.4
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++.+++.||.++ .+.++|..+..-...-.. ........+..-++..++.||.+ ..+.+||
T Consensus 65 ~d~~~l~s~s~Dg-----~v~iWd~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~l~s~~~d-----~~v~iw~ 125 (340)
T 1got_B 65 TDSRLLLSASQDG-----KLIIWDSYTTNKVHAIPL---------RSSWVMTCAYAPSGNYVACGGLD-----NICSIYN 125 (340)
T ss_dssp TTSSEEEEEETTT-----EEEEEETTTCCEEEEEEC---------SSSCEEEEEECTTSSEEEEEETT-----CEEEEEE
T ss_pred CCCCEEEEEeCCC-----cEEEEECCCCCcceEeec---------CCccEEEEEECCCCCEEEEEeCC-----CeEEEEE
Confidence 4456777777543 478889877654332111 11111111222255677777754 3577888
Q ss_pred CCCCe--EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe
Q 010770 109 TDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV 186 (501)
Q Consensus 109 ~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~ 186 (501)
+.+.. ........ ... ....++....++. ++.|+.+ ..+.+||+.+.+-...- .+ ... .-.++...
T Consensus 126 ~~~~~~~~~~~~~~~-~h~-~~v~~~~~~~~~~-l~s~s~d-----~~i~~wd~~~~~~~~~~-~~--h~~-~v~~~~~~ 193 (340)
T 1got_B 126 LKTREGNVRVSRELA-GHT-GYLSCCRFLDDNQ-IVTSSGD-----TTCALWDIETGQQTTTF-TG--HTG-DVMSLSLA 193 (340)
T ss_dssp TTTCSBSCEEEEEEE-CCS-SCEEEEEEEETTE-EEEEETT-----SCEEEEETTTTEEEEEE-CC--CSS-CEEEEEEC
T ss_pred CccCCCcceeEEEec-CCC-ccEEEEEECCCCc-EEEEECC-----CcEEEEECCCCcEEEEE-cC--CCC-ceEEEEEC
Confidence 76642 11111100 111 1112233344555 4555543 34788998887654322 11 011 11122222
Q ss_pred -CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCccccc
Q 010770 187 -EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYDI 264 (501)
Q Consensus 187 -~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~~ 264 (501)
++.+++.|+..+ .+..||+.+..-...- .+ .... -.+++. -++..++.|+.+
T Consensus 194 ~~~~~l~sg~~d~------------~v~~wd~~~~~~~~~~-~~--h~~~-v~~v~~~p~~~~l~s~s~d---------- 247 (340)
T 1got_B 194 PDTRLFVSGACDA------------SAKLWDVREGMCRQTF-TG--HESD-INAICFFPNGNAFATGSDD---------- 247 (340)
T ss_dssp TTSSEEEEEETTS------------CEEEEETTTCSEEEEE-CC--CSSC-EEEEEECTTSSEEEEEETT----------
T ss_pred CCCCEEEEEeCCC------------cEEEEECCCCeeEEEE-cC--CcCC-EEEEEEcCCCCEEEEEcCC----------
Confidence 566777777542 3445676665433221 11 1111 112333 345666777644
Q ss_pred ccCeEEEEEcCCCceEEcccCCCCCCcccc-eEEEE-ECCEEEEEccCCC
Q 010770 265 YYNDTIILDRLSAQWKRLPIGNEPPPARAY-HSMTC-LGSLYLLFGGFDG 312 (501)
Q Consensus 265 ~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~-~~~~~-~~~~iyv~GG~~~ 312 (501)
..+.+||+.+..-....... ..... .+++. -++.+++.|+.++
T Consensus 248 --~~v~iwd~~~~~~~~~~~~~---~~~~~v~~~~~s~~g~~l~~g~~d~ 292 (340)
T 1got_B 248 --ATCRLFDLRADQELMTYSHD---NIICGITSVSFSKSGRLLLAGYDDF 292 (340)
T ss_dssp --SCEEEEETTTTEEEEEECCT---TCCSCEEEEEECTTSSEEEEEETTS
T ss_pred --CcEEEEECCCCcEEEEEccC---CcccceEEEEECCCCCEEEEECCCC
Confidence 35788898776432221111 11111 22222 2567777777654
No 127
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=93.48 E-value=5.1 Score=41.23 Aligned_cols=112 Identities=11% Similarity=0.009 Sum_probs=55.8
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCC----cE-EeceecCCCCCCCCCCCCc-ceeEEEEe--CCEEEEEccc
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK----LW-FQPECTGNGSNGQVGPGPR-AFHIAVAI--DCHMFIFGGR 95 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~----~W-~~l~~~~~~~~~~~~p~~R-~~h~~~~~--~~~iyv~GG~ 95 (501)
++....++..+++|+ + ..+.+||+.+. .- ..+. ..... ....+..- ++.+++.|+.
T Consensus 23 ~~~~spdg~~l~~~~--~----~~v~v~~~~~~~~~~~~~~~~~----------~h~~~~v~~~~~sp~~~~~~l~s~~~ 86 (615)
T 1pgu_A 23 HLSYDPTTNAIAYPC--G----KSAFVRCLDDGDSKVPPVVQFT----------GHGSSVVTTVKFSPIKGSQYLCSGDE 86 (615)
T ss_dssp CCEEETTTTEEEEEE--T----TEEEEEECCSSCCSSCSEEEEC----------TTTTSCEEEEEECSSTTCCEEEEEET
T ss_pred EEEECCCCCEEEEec--C----CeEEEEECCCCCCccccceEEe----------cCCCceEEEEEECcCCCCCEEEEecC
Confidence 344445566777766 1 36889999866 22 2221 11112 22223333 5677777765
Q ss_pred cCCCCCCcEEEEECCCC------eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEE
Q 010770 96 FGSRRLGDFWVLDTDIW------QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 96 ~~~~~~~~~~~yd~~t~------~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd 159 (501)
+ ..+.+||..+. ....+..... ....-.+++...++..++.+|.+... ...++.+|
T Consensus 87 d-----g~v~vw~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~~-~~~v~~~d 148 (615)
T 1pgu_A 87 S-----GKVIVWGWTFDKESNSVEVNVKSEFQV--LAGPISDISWDFEGRRLCVVGEGRDN-FGVFISWD 148 (615)
T ss_dssp T-----SEEEEEEEEEEGGGTEEEEEEEEEEEC--CSSCEEEEEECTTSSEEEEEECCSSC-SEEEEETT
T ss_pred C-----CEEEEEeCCCCcccccccccccchhhc--ccccEEEEEEeCCCCEEEEeccCCCC-ccEEEEEE
Confidence 3 35777887644 3333322101 11223344444566677777654322 34566666
No 128
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=93.44 E-value=2.8 Score=40.44 Aligned_cols=112 Identities=11% Similarity=-0.020 Sum_probs=63.3
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEEC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
.+++.|+.+ ..+.+||..+.......... .....-.+++.. ++.+++.|+.+ ..+.++|+
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~--------~h~~~v~~~~~~~~~~~~l~s~~~d-----~~i~iwd~ 148 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQGM--------GPGDAITGMKFNQFNTNQLFVSSIR-----GATTLRDF 148 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECCC--------STTCBEEEEEEETTEEEEEEEEETT-----TEEEEEET
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeecC--------CcCCceeEEEeCCCCCCEEEEEeCC-----CEEEEEEC
Confidence 577777753 35889999988766543210 111122233333 34667776543 35888999
Q ss_pred CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEc
Q 010770 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (501)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 168 (501)
.+.....+.... .......+++...++.+++.|+.+ ..+..||+....-..+
T Consensus 149 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~~~~~~ 200 (383)
T 3ei3_B 149 SGSVIQVFAKTD--SWDYWYCCVDVSVSRQMLATGDST-----GRLLLLGLDGHEIFKE 200 (383)
T ss_dssp TSCEEEEEECCC--CSSCCEEEEEEETTTTEEEEEETT-----SEEEEEETTSCEEEEE
T ss_pred CCCceEEEeccC--CCCCCeEEEEECCCCCEEEEECCC-----CCEEEEECCCCEEEEe
Confidence 987776665311 111222344445566777777754 3588899854444333
No 129
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=93.37 E-value=5 Score=37.27 Aligned_cols=213 Identities=9% Similarity=-0.016 Sum_probs=105.3
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCC-CcceeEEEEeCCEEEEEccccCCCCCCcEEEE
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPG-PRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~-~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
+.+++.|..+ ..+.++|.+++ .|+.-. +. ....+..+.-+++|++.+ .+.+..|
T Consensus 5 ~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----------~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~ 61 (276)
T 3no2_A 5 QHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----------EKGWECNSVAATKAGEILFSY-------SKGAKMI 61 (276)
T ss_dssp CEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----------CTTCCCCEEEECTTSCEEEEC-------BSEEEEE
T ss_pred CcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----------CccCCCcCeEECCCCCEEEeC-------CCCEEEE
Confidence 5677766532 45888998776 465532 11 122233344477888843 1358899
Q ss_pred ECCCC-eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc-eEEcccCCCCCC--CCcceeE
Q 010770 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WMQLPVTGSVPP--PRCGHTA 183 (501)
Q Consensus 108 d~~t~-~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~~~~~~~~~p~--~r~~~~~ 183 (501)
|+... .|+--. +.....+++....++.+++....+ ...++.+|+.... |+.- ..+..+. .......
T Consensus 62 d~~G~~~W~~~~-----~~~~~~~~~~~~~dG~~lv~~~~~----~~~v~~vd~~Gk~l~~~~-~~~~~~~~~~~~~~v~ 131 (276)
T 3no2_A 62 TRDGRELWNIAA-----PAGCEMQTARILPDGNALVAWCGH----PSTILEVNMKGEVLSKTE-FETGIERPHAQFRQIN 131 (276)
T ss_dssp CTTSCEEEEEEC-----CTTCEEEEEEECTTSCEEEEEEST----TEEEEEECTTSCEEEEEE-ECCSCSSGGGSCSCCE
T ss_pred CCCCCEEEEEcC-----CCCccccccEECCCCCEEEEecCC----CCEEEEEeCCCCEEEEEe-ccCCCCcccccccCce
Confidence 98332 355332 222234556666777777765421 2357788875432 4432 1111111 1111222
Q ss_pred EEeCCEEEEEcccCCCCCcccccccccccccccCCCC-ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCccc
Q 010770 184 TMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRY 262 (501)
Q Consensus 184 ~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~-~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~ 262 (501)
...++.+++..... ..+..||++.+ .|+.-. . ..| ..+....++.+++.+...
T Consensus 132 ~~~~G~~lv~~~~~------------~~v~~~d~~G~~~w~~~~-~-~~~----~~~~~~~~g~~~v~~~~~-------- 185 (276)
T 3no2_A 132 KNKKGNYLVPLFAT------------SEVREIAPNGQLLNSVKL-S-GTP----FSSAFLDNGDCLVACGDA-------- 185 (276)
T ss_dssp ECTTSCEEEEETTT------------TEEEEECTTSCEEEEEEC-S-SCC----CEEEECTTSCEEEECBTT--------
T ss_pred ECCCCCEEEEecCC------------CEEEEECCCCCEEEEEEC-C-CCc----cceeEcCCCCEEEEeCCC--------
Confidence 23355555543211 34566777632 355332 1 111 123334567777766532
Q ss_pred ccccCeEEEEEcCCCc--eEEcccCCCCCCccc--ceEEEE-ECCEEEEEc
Q 010770 263 DIYYNDTIILDRLSAQ--WKRLPIGNEPPPARA--YHSMTC-LGSLYLLFG 308 (501)
Q Consensus 263 ~~~~~~v~~yd~~~~~--W~~v~~~~~~p~~r~--~~~~~~-~~~~iyv~G 308 (501)
..+..+|+.+.+ |+.-... .+..|. ..+++. .++.+||..
T Consensus 186 ----~~v~~~d~~tG~~~w~~~~~~--~~~~~l~~~~~~~~~~~G~i~v~~ 230 (276)
T 3no2_A 186 ----HCFVQLNLESNRIVRRVNAND--IEGVQLFFVAQLFPLQNGGLYICN 230 (276)
T ss_dssp ----SEEEEECTTTCCEEEEEEGGG--SBSCCCSEEEEEEECTTSCEEEEE
T ss_pred ----CeEEEEeCcCCcEEEEecCCC--CCCccccccccceEcCCCCEEEEe
Confidence 358999998543 5543221 111222 223333 368888876
No 130
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=93.32 E-value=2.9 Score=39.42 Aligned_cols=116 Identities=11% Similarity=0.120 Sum_probs=60.0
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CC-EEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DC-HMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~-~iyv~GG~~~~~~~~~~~~y 107 (501)
++.+|+.++. ...++++|+.+++....... +....-+..+.. ++ .+|+.+.. ...++++
T Consensus 10 ~~~~~v~~~~-----~~~v~~~d~~~~~~~~~~~~---------~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~ 70 (349)
T 1jmx_B 10 GHEYMIVTNY-----PNNLHVVDVASDTVYKSCVM---------PDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGI 70 (349)
T ss_dssp TCEEEEEEET-----TTEEEEEETTTTEEEEEEEC---------SSCCSSCEEEECTTSSEEEEEETT-----TTEEEEE
T ss_pred CCEEEEEeCC-----CCeEEEEECCCCcEEEEEec---------CCCCCCceeEECCCCCEEEEEeCC-----CCcEEEE
Confidence 3577777664 24699999998876543221 110011233333 34 57777532 2469999
Q ss_pred ECCCCeEEEEecCCCCCC--cCCccEEEEEcCc-EEEEEecC---CCC---cccccEEEEECCCCc
Q 010770 108 DTDIWQWSELTSFGDLPS--PRDFAAASAIGNR-KIVMYGGW---DGK---KWLSDVYVLDTISLE 164 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~--~r~~~~~~~~~~~-~iyv~GG~---~~~---~~~~~~~~yd~~t~~ 164 (501)
|+.+++-......+..|. ...-+.++...++ .+|+.+.. ... .....+++||+.+++
T Consensus 71 d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 136 (349)
T 1jmx_B 71 DLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGL 136 (349)
T ss_dssp ETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGG
T ss_pred eCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCcc
Confidence 999887654332111110 1112344444455 45554321 000 012568999988744
No 131
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=93.31 E-value=5.2 Score=37.31 Aligned_cols=107 Identities=9% Similarity=-0.044 Sum_probs=57.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++..++.|+.+ ..+.++|..++.-...-.. ...........-+++.++.|+.+ ..+.+||
T Consensus 23 p~~~~l~s~~~d-----g~v~lWd~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~l~s~s~d-----~~i~vwd 83 (304)
T 2ynn_A 23 PTEPWVLTTLYS-----GRVELWNYETQVEVRSIQV---------TETPVRAGKFIARKNWIIVGSDD-----FRIRVFN 83 (304)
T ss_dssp SSSSEEEEEETT-----SEEEEEETTTTEEEEEEEC---------CSSCEEEEEEEGGGTEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEcCC-----CcEEEEECCCCceeEEeec---------cCCcEEEEEEeCCCCEEEEECCC-----CEEEEEE
Confidence 446677777754 3478889888754332111 11112222233355666777643 3588899
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
..+++-...-. . ....-.+++...++.+++.|+.++. +.++|..+.
T Consensus 84 ~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~sgs~D~~-----v~lWd~~~~ 129 (304)
T 2ynn_A 84 YNTGEKVVDFE---A-HPDYIRSIAVHPTKPYVLSGSDDLT-----VKLWNWENN 129 (304)
T ss_dssp TTTCCEEEEEE---C-CSSCEEEEEECSSSSEEEEEETTSC-----EEEEEGGGT
T ss_pred CCCCcEEEEEe---C-CCCcEEEEEEcCCCCEEEEECCCCe-----EEEEECCCC
Confidence 88775432211 1 1111233444456677778876543 777887654
No 132
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=93.20 E-value=0.82 Score=45.62 Aligned_cols=109 Identities=15% Similarity=0.070 Sum_probs=61.5
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE--eCCEEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA--IDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~--~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
++.+++.|+.++ .|.++|+.+..-..+.... ... ..-.+++. .++.+++.|+.++ .+.++
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~~-------gH~-~~V~~l~f~p~~~~~l~s~s~D~-----~v~iw 192 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKGI-------GAG-GSITGLKFNPLNTNQFYASSMEG-----TTRLQ 192 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECCC-------SSS-CCCCEEEECSSCTTEEEEECSSS-----CEEEE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEcc-------CCC-CCEEEEEEeCCCCCEEEEEeCCC-----EEEEe
Confidence 356777787544 4888888776543332110 011 11122333 2456677776543 47888
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
|+.++....+.... .......++....++.+++.|+.++ .+..+|+.+.
T Consensus 193 d~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~g~~dg-----~i~~wd~~~~ 241 (435)
T 4e54_B 193 DFKGNILRVFASSD--TINIWFCSLDVSASSRMVVTGDNVG-----NVILLNMDGK 241 (435)
T ss_dssp ETTSCEEEEEECCS--SCSCCCCCEEEETTTTEEEEECSSS-----BEEEEESSSC
T ss_pred eccCCceeEEeccC--CCCccEEEEEECCCCCEEEEEeCCC-----cEeeeccCcc
Confidence 99888766655311 1122233445556677888887654 4788887654
No 133
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=93.08 E-value=4.9 Score=43.20 Aligned_cols=211 Identities=12% Similarity=0.081 Sum_probs=103.4
Q ss_pred ccCCceEEEEcC---CCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEec
Q 010770 43 RFLSDVVVYDID---NKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS 119 (501)
Q Consensus 43 ~~~~~v~~yd~~---t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~ 119 (501)
.....+|+.+.. .+.|..+........+ ..........+-+++.++++...++.....++++|+.+++......
T Consensus 130 ~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~---~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~ 206 (741)
T 1yr2_A 130 MNQSQLLVRPADAPVGTKGRVLLDPNTWAKD---GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL 206 (741)
T ss_dssp CSSCEEEEEETTSCTTCCCEEEECGGGCC-------EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE
T ss_pred CeEEEEEEEcCCccCCCCCEEEECHHHhccC---CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC
Confidence 335778999987 7778776422110000 0001111122225665555544333333579999999998865431
Q ss_pred CCCCCCcCCccEEEEEcCcEEEEEecCCCC---------cccccEEEEECCCCce--EEcccCCCCCCCCcceeEEEe-C
Q 010770 120 FGDLPSPRDFAAASAIGNRKIVMYGGWDGK---------KWLSDVYVLDTISLEW--MQLPVTGSVPPPRCGHTATMV-E 187 (501)
Q Consensus 120 ~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~---------~~~~~~~~yd~~t~~W--~~~~~~~~~p~~r~~~~~~~~-~ 187 (501)
+... ....+...| +-++++..+.. .....++.+++.+..- ..+.. ....+......... +
T Consensus 207 ----~~~~-~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~--~~~~~~~~~~~~~SpD 278 (741)
T 1yr2_A 207 ----KWVK-FSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFA--TPELPKRGHGASVSSD 278 (741)
T ss_dssp ----EEEE-SCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEEC--CTTCTTCEEEEEECTT
T ss_pred ----CCce-eccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEec--cCCCCeEEEEEEECCC
Confidence 1111 112333344 43444443322 1245688888877652 12211 11111222222222 4
Q ss_pred C-EEEEEcccCCCCCcccccccccccccccCCCC--c-eEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccc
Q 010770 188 K-RLLIYGGRGGGGPIMGDLWALKGLIEEENETP--G-WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 188 ~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~--~-W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~ 263 (501)
+ .|++....... .. +.++.+|+.+. . |..+... ...... .+...++.||+....+.
T Consensus 279 G~~l~~~~~~~~~--~~------~~l~~~d~~~~~~~~~~~l~~~---~~~~~~-~~~~dg~~l~~~s~~~~-------- 338 (741)
T 1yr2_A 279 GRWVVITSSEGTD--PV------NTVHVARVTNGKIGPVTALIPD---LKAQWD-FVDGVGDQLWFVSGDGA-------- 338 (741)
T ss_dssp SCEEEEEEECTTC--SC------CEEEEEEEETTEECCCEEEECS---SSSCEE-EEEEETTEEEEEECTTC--------
T ss_pred CCEEEEEEEccCC--Cc------ceEEEEECCCCCCcccEEecCC---CCceEE-EEeccCCEEEEEECCCC--------
Confidence 5 45544432211 12 34445577776 6 8887621 112222 22246778887764332
Q ss_pred cccCeEEEEEcCC--CceEEcccC
Q 010770 264 IYYNDTIILDRLS--AQWKRLPIG 285 (501)
Q Consensus 264 ~~~~~v~~yd~~~--~~W~~v~~~ 285 (501)
....++++|+.+ ..|..+-..
T Consensus 339 -~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 339 -PLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp -TTCEEEEEECSSSSCEEEEEECC
T ss_pred -CCCEEEEEeCCCCccccEEEecC
Confidence 236799999987 579887643
No 134
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=92.75 E-value=1.2 Score=43.24 Aligned_cols=110 Identities=12% Similarity=-0.019 Sum_probs=59.4
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccC-CCCCCcEEEEECCCCeEEEEecCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFG-SRRLGDFWVLDTDIWQWSELTSFGDL 123 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~-~~~~~~~~~yd~~t~~W~~~~~~~~~ 123 (501)
..++++|+.+++-..+... ..+..+....- +++.+++....+ ......++.+|..+.....+.. .
T Consensus 168 ~~l~~~d~~~g~~~~l~~~----------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~---~ 234 (388)
T 3pe7_A 168 CRLMRVDLKTGESTVILQE----------NQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKT---H 234 (388)
T ss_dssp EEEEEEETTTCCEEEEEEE----------SSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCC---C
T ss_pred ceEEEEECCCCceEEeecC----------CccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeee---C
Confidence 5789999999877766532 12233444444 454433333221 2235689999998877666642 1
Q ss_pred CCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCceEEcc
Q 010770 124 PSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (501)
Q Consensus 124 p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 169 (501)
+........+...+++ |++.... .......++++|+.+.+-+.+.
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~d~~~g~~~~l~ 280 (388)
T 3pe7_A 235 AEGESCTHEFWVPDGSALVYVSYL-KGSPDRFIYSADPETLENRQLT 280 (388)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEE-TTCCCEEEEEECTTTCCEEEEE
T ss_pred CCCcccccceECCCCCEEEEEecC-CCCCcceEEEEecCCCceEEEE
Confidence 1111112223334554 4333322 2222235999999998877664
No 135
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=92.73 E-value=6.1 Score=36.49 Aligned_cols=56 Identities=14% Similarity=-0.003 Sum_probs=28.8
Q ss_pred eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 243 ~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
.++.+++.+|... ..+.+||..+.+-...-.... . .-.+++.. ++.+++.||.++.
T Consensus 251 ~~~~~~~~sg~~d-----------~~i~iwd~~~~~~~~~l~gH~---~-~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 251 HYKELISGHGFAQ-----------NQLVIWKYPTMAKVAELKGHT---S-RVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TTTEEEEEECTTT-----------CCEEEEETTTCCEEEEECCCS---S-CEEEEEECTTSSCEEEEETTTE
T ss_pred cccceEEEEEcCC-----------CEEEEEECCCCcEEEEEcCCC---C-CEEEEEEcCCCCEEEEEecCCe
Confidence 4556666655433 458899987654322111100 1 11222222 5677778887653
No 136
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=92.63 E-value=3 Score=39.96 Aligned_cols=186 Identities=8% Similarity=0.027 Sum_probs=90.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++.||.++ .+.++|..++.|........ .....-.+++...++..++.|+.++. +.++|..+..+
T Consensus 27 ~g~~las~~~D~-----~i~iw~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~g~~l~s~s~D~~-----v~iw~~~~~~~ 95 (345)
T 3fm0_A 27 AGTLLASCGGDR-----RIRIWGTEGDSWICKSVLSE-GHQRTVRKVAWSPCGNYLASASFDAT-----TCIWKKNQDDF 95 (345)
T ss_dssp TSSCEEEEETTS-----CEEEEEEETTEEEEEEEECS-SCSSCEEEEEECTTSSEEEEEETTSC-----EEEEEECCC-E
T ss_pred CCCEEEEEcCCC-----eEEEEEcCCCcceeeeeecc-ccCCcEEEEEECCCCCEEEEEECCCc-----EEEEEccCCCe
Confidence 567777777543 47788888887754332100 11112223333456678888886543 66777777766
Q ss_pred EEcccCCCCCCCCcc-eeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCC-ceEEeecCCCCCCCceeeEEEE
Q 010770 166 MQLPVTGSVPPPRCG-HTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-GWTQLKLPGQAPSSRCGHTITS 242 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~-~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~-~W~~~~~~g~~p~~r~~~s~~~ 242 (501)
..+.. +..-... .+++.. ++++++.|+... .+..||+.+. .+..+...... .... .+++.
T Consensus 96 ~~~~~---~~~h~~~v~~v~~sp~~~~l~s~s~D~------------~v~iwd~~~~~~~~~~~~~~~h-~~~v-~~~~~ 158 (345)
T 3fm0_A 96 ECVTT---LEGHENEVKSVAWAPSGNLLATCSRDK------------SVWVWEVDEEDEYECVSVLNSH-TQDV-KHVVW 158 (345)
T ss_dssp EEEEE---ECCCSSCEEEEEECTTSSEEEEEETTS------------CEEEEEECTTSCEEEEEEECCC-CSCE-EEEEE
T ss_pred EEEEE---ccCCCCCceEEEEeCCCCEEEEEECCC------------eEEEEECCCCCCeEEEEEecCc-CCCe-EEEEE
Confidence 54431 1111111 122222 566777776542 2344555443 23322211011 1111 12222
Q ss_pred -eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 243 -GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 243 -~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
-++.+++.|+.+ ..+.+||..+..|..+...... ...-.+++.. +++.++.|+.++.
T Consensus 159 ~p~~~~l~s~s~d------------~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~sp~g~~l~s~s~D~~ 217 (345)
T 3fm0_A 159 HPSQELLASASYD------------DTVKLYREEEDDWVCCATLEGH--ESTVWSLAFDPSGQRLASCSDDRT 217 (345)
T ss_dssp CSSSSCEEEEETT------------SCEEEEEEETTEEEEEEEECCC--SSCEEEEEECTTSSEEEEEETTSC
T ss_pred CCCCCEEEEEeCC------------CcEEEEEecCCCEEEEEEecCC--CCceEEEEECCCCCEEEEEeCCCe
Confidence 345566666543 3578888888888755432110 1111222222 4667777776653
No 137
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=92.62 E-value=5.5 Score=38.58 Aligned_cols=185 Identities=10% Similarity=0.028 Sum_probs=86.1
Q ss_pred CEEEEEccccCCCCCCcEEEEECCCCe------EEEEecCCCCCCcCCccEEEEEcC-cEEEEEecCCCCcccccEEEEE
Q 010770 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQ------WSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~~~yd~~t~~------W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd 159 (501)
+.+++.|+.+ ..+.+||..+.+ -..... ..........+++...+ +.+++.|+.++ .+.+||
T Consensus 126 ~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg-----~v~iwd 194 (416)
T 2pm9_A 126 DNVLASGGNN-----GEIFIWDMNKCTESPSNYTPLTPG-QSMSSVDEVISLAWNQSLAHVFASAGSSN-----FASIWD 194 (416)
T ss_dssp TTBEEEECSS-----SCEEBCBTTTTSSCTTTCCCBCCC-CSCCSSCCCCEEEECSSCTTEEEEESSSS-----CEEEEE
T ss_pred CCEEEEEcCC-----CeEEEEECCCCccccccccccccc-cccCCCCCeeEEEeCCCCCcEEEEEcCCC-----CEEEEE
Confidence 5677777644 357788887664 111000 00111112233444444 46778777643 488999
Q ss_pred CCCCceEEcccCCCCCC-----CCcceeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCC
Q 010770 160 TISLEWMQLPVTGSVPP-----PRCGHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP 232 (501)
Q Consensus 160 ~~t~~W~~~~~~~~~p~-----~r~~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p 232 (501)
+.+.+-...- ..+. ...-.+++.. + ..+++.|+..+.. ..+..||+.+..-..... ...
T Consensus 195 ~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~---------~~i~~~d~~~~~~~~~~~--~~~ 260 (416)
T 2pm9_A 195 LKAKKEVIHL---SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDND---------PSILIWDLRNANTPLQTL--NQG 260 (416)
T ss_dssp TTTTEEEEEE---CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSS---------CCCCEEETTSTTSCSBCC--CSC
T ss_pred CCCCCcceEE---eccccccccCCceEEEEECCCCCCEEEEEECCCCC---------ceEEEEeCCCCCCCcEEe--ecC
Confidence 9887655433 1111 1111223333 2 3567777654311 145566766542110110 001
Q ss_pred CCceeeEEEEe--CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CC-EEEEEc
Q 010770 233 SSRCGHTITSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GS-LYLLFG 308 (501)
Q Consensus 233 ~~r~~~s~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~-~iyv~G 308 (501)
....-.+++.. ++.+++.|+.+ ..+.+||+.+.+-...-... .....+++.. ++ .+++.|
T Consensus 261 ~~~~v~~~~~s~~~~~~l~s~~~d------------g~v~~wd~~~~~~~~~~~~~----~~~v~~~~~s~~~~~~l~s~ 324 (416)
T 2pm9_A 261 HQKGILSLDWCHQDEHLLLSSGRD------------NTVLLWNPESAEQLSQFPAR----GNWCFKTKFAPEAPDLFACA 324 (416)
T ss_dssp CSSCEEEEEECSSCSSCEEEEESS------------SEEEEECSSSCCEEEEEECS----SSCCCCEEECTTCTTEEEEC
T ss_pred ccCceeEEEeCCCCCCeEEEEeCC------------CCEEEeeCCCCccceeecCC----CCceEEEEECCCCCCEEEEE
Confidence 11112233332 56677777643 35888998776433221111 1111223333 33 678888
Q ss_pred cCCC
Q 010770 309 GFDG 312 (501)
Q Consensus 309 G~~~ 312 (501)
+.++
T Consensus 325 ~~d~ 328 (416)
T 2pm9_A 325 SFDN 328 (416)
T ss_dssp CSSS
T ss_pred ecCC
Confidence 7664
No 138
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=92.54 E-value=6.6 Score=36.46 Aligned_cols=109 Identities=8% Similarity=0.038 Sum_probs=54.5
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe---CCEEEEEccccCCCCCCcEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~~~~ 105 (501)
.+++.++.|+.++ .+.+||..+.....+.... .... .-.+++.. ++.+++.|+.+ ..+.
T Consensus 19 ~~g~~las~s~D~-----~v~iw~~~~~~~~~~~~l~-------gH~~-~V~~v~~s~~~~g~~l~s~s~D-----~~v~ 80 (297)
T 2pm7_B 19 YYGKRMATCSSDK-----TIKIFEVEGETHKLIDTLT-------GHEG-PVWRVDWAHPKFGTILASCSYD-----GKVM 80 (297)
T ss_dssp TTSSEEEEEETTS-----CEEEEEBCSSCBCCCEEEC-------CCSS-CEEEEEECCGGGCSEEEEEETT-----TEEE
T ss_pred CCCCEEEEEeCCC-----EEEEEecCCCCcEEEEEEc-------cccC-CeEEEEecCCCcCCEEEEEcCC-----CEEE
Confidence 4466777777543 4778888754433332211 0111 11222222 25677777654 3577
Q ss_pred EEECCCCeEEEEecCCCCCCcCCccEEEEE-cC--cEEEEEecCCCCcccccEEEEECCCC
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
++|+.+++|..+.. .......-.++.+ .+ +.+++.|+.++ .+.+||+.+.
T Consensus 81 iWd~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~g~~l~s~s~d~-----~v~~wd~~~~ 133 (297)
T 2pm7_B 81 IWKEENGRWSQIAV---HAVHSASVNSVQWAPHEYGPMLLVASSDG-----KVSVVEFKEN 133 (297)
T ss_dssp EEEBSSSCBCCCEE---ECCCSSCEEEEEECCGGGCSEEEEEETTS-----EEEEEEBCSS
T ss_pred EEEcCCCceEEEEE---eecCCCceeEEEeCcCCCCcEEEEEECCC-----cEEEEEecCC
Confidence 88888876654432 1111111122222 22 45677777543 3667777654
No 139
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=92.53 E-value=6.9 Score=37.00 Aligned_cols=71 Identities=14% Similarity=0.227 Sum_probs=38.7
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCC--CeEEEEecCCCCCCcC-CccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTSFGDLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+++.++.|+.++ .+.++|+.. ..+..+.. +.... .-.+++...++.+++.|+.++. +.++|..+
T Consensus 118 ~g~~las~s~D~-----~v~iwd~~~~~~~~~~~~~---~~~h~~~v~~v~~~p~~~~l~s~s~D~~-----i~iW~~~~ 184 (330)
T 2hes_X 118 DGYYLATCSRDK-----SVWIWETDESGEEYECISV---LQEHSQDVKHVIWHPSEALLASSSYDDT-----VRIWKDYD 184 (330)
T ss_dssp TSCEEEEEETTS-----CEEEEECCTTCCCCEEEEE---ECCCSSCEEEEEECSSSSEEEEEETTSC-----EEEEEEET
T ss_pred CCCEEEEEeCCC-----EEEEEeccCCCCCeEEEEE---eccCCCceEEEEECCCCCEEEEEcCCCe-----EEEEECCC
Confidence 556677776543 577888743 23443332 11111 1122333345677888886543 67778777
Q ss_pred CceEEcc
Q 010770 163 LEWMQLP 169 (501)
Q Consensus 163 ~~W~~~~ 169 (501)
..|..+.
T Consensus 185 ~~~~~~~ 191 (330)
T 2hes_X 185 DDWECVA 191 (330)
T ss_dssp TEEEEEE
T ss_pred CCeeEEE
Confidence 7776554
No 140
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=92.37 E-value=5.7 Score=38.16 Aligned_cols=105 Identities=11% Similarity=-0.020 Sum_probs=54.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe----CCEEEEEccccCCCCCCcEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI----DCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~----~~~iyv~GG~~~~~~~~~~~ 105 (501)
++.+++.|+.+ ..+.+||+.+..-...... +.+ ..+.... ++.+++.|+.+ ..+.
T Consensus 111 ~~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~v~ 169 (408)
T 4a11_B 111 DTGMFTSSSFD-----KTLKVWDTNTLQTADVFNF---------EET--VYSHHMSPVSTKHCLVAVGTRG-----PKVQ 169 (408)
T ss_dssp CTTCEEEEETT-----SEEEEEETTTTEEEEEEEC---------SSC--EEEEEECSSCSSCCEEEEEESS-----SSEE
T ss_pred CCcEEEEEeCC-----CeEEEeeCCCCccceeccC---------CCc--eeeeEeecCCCCCcEEEEEcCC-----CeEE
Confidence 34566666643 3588899988765544321 111 1222221 33466776643 3588
Q ss_pred EEECCCCeEEEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCc
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+||+.+.+-...-. . ....-.+++...++. +++.|+.++ .+.+||+.+..
T Consensus 170 ~~d~~~~~~~~~~~---~-~~~~v~~~~~~~~~~~ll~~~~~dg-----~i~i~d~~~~~ 220 (408)
T 4a11_B 170 LCDLKSGSCSHILQ---G-HRQEILAVSWSPRYDYILATASADS-----RVKLWDVRRAS 220 (408)
T ss_dssp EEESSSSCCCEEEC---C-CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTCSS
T ss_pred EEeCCCcceeeeec---C-CCCcEEEEEECCCCCcEEEEEcCCC-----cEEEEECCCCC
Confidence 89987765332221 0 111112333333433 777787654 37888886553
No 141
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=92.36 E-value=2.9 Score=43.33 Aligned_cols=204 Identities=11% Similarity=0.026 Sum_probs=95.2
Q ss_pred CceEEEEcCCCcEEeceecCCC-CCC-CCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNG-SNG-QVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~-~~~-~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~ 122 (501)
+.+.++|..+.+-...-..... .+. .-.|.+|..+..+.- +..+|+... ..+.++++|..+.+-..+..
T Consensus 248 ~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~-----~~g~i~vvd~~~~~~l~~~~--- 319 (543)
T 1nir_A 248 PQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK-----ETGKVLLVNYKDIDNLTVTS--- 319 (543)
T ss_dssp SEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET-----TTTEEEEEECTTSSSCEEEE---
T ss_pred CeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC-----CCCeEEEEEecCCCcceeEE---
Confidence 4578889887654332211000 000 001233433333333 345555432 23578999987643222111
Q ss_pred CCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCC
Q 010770 123 LPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGG 200 (501)
Q Consensus 123 ~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~ 200 (501)
++..+.-+..+...+++ +|+.+. ..+.+.++|+.+++-...-..+..|.+-.+.....- ++.+|+.+....
T Consensus 320 i~~~~~~~~~~~spdg~~l~va~~-----~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~d-- 392 (543)
T 1nir_A 320 IGAAPFLHDGGWDSSHRYFMTAAN-----NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLGD-- 392 (543)
T ss_dssp EECCSSCCCEEECTTSCEEEEEEG-----GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSSS--
T ss_pred eccCcCccCceECCCCCEEEEEec-----CCCeEEEEECCCCeEEEeeccCCCCCCCCCcccCCCCCccEEEeccCCC--
Confidence 22334445555555555 554432 234688899999876654333344443333333222 367887764322
Q ss_pred CcccccccccccccccCCCC-----ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcC
Q 010770 201 PIMGDLWALKGLIEEENETP-----GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL 275 (501)
Q Consensus 201 ~~~~d~~~l~~~~~Yd~~t~-----~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 275 (501)
+.+.++|..+. .|+.+.............+....+..||+-.-.+.+ ....+.|.+||+.
T Consensus 393 ---------~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~------~~~~~~v~v~d~~ 457 (543)
T 1nir_A 393 ---------GSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPD------ARISQSVAVFDLK 457 (543)
T ss_dssp ---------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSS------HHHHTCEEEEETT
T ss_pred ---------ceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCC------cccCceEEEEECC
Confidence 33445566552 276554210011111111111134466653211110 1235789999998
Q ss_pred CCce
Q 010770 276 SAQW 279 (501)
Q Consensus 276 ~~~W 279 (501)
+.+-
T Consensus 458 ~~~~ 461 (543)
T 1nir_A 458 NLDA 461 (543)
T ss_dssp CTTS
T ss_pred CCCC
Confidence 7763
No 142
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=92.31 E-value=8.8 Score=37.33 Aligned_cols=182 Identities=11% Similarity=-0.028 Sum_probs=91.3
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLP 124 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p 124 (501)
..+.+||..++........ .....-.+++.. ++.+++.|+.+ ..+.+||+.+.+....-.
T Consensus 113 ~~v~lw~~~~~~~~~~~~~---------~~~~~v~~v~~s~~~~~l~~~~~d-----g~i~iwd~~~~~~~~~~~----- 173 (401)
T 4aez_A 113 RNVYVWNADSGSVSALAET---------DESTYVASVKWSHDGSFLSVGLGN-----GLVDIYDVESQTKLRTMA----- 173 (401)
T ss_dssp TEEEEEETTTCCEEEEEEC---------CTTCCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCEEEEEC-----
T ss_pred CeEEEeeCCCCcEeEeeec---------CCCCCEEEEEECCCCCEEEEECCC-----CeEEEEECcCCeEEEEec-----
Confidence 4589999999887665432 111112222222 55667777644 358899998876544321
Q ss_pred CcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcc
Q 010770 125 SPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIM 203 (501)
Q Consensus 125 ~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~ 203 (501)
.......++.. ++.+++.|+.+ ..+.+||+.+..-...... ... ..-.++... ++.+++.|+..
T Consensus 174 ~~~~~v~~~~~-~~~~l~~~~~d-----g~i~i~d~~~~~~~~~~~~-~~~--~~v~~~~~~~~~~~l~s~~~d------ 238 (401)
T 4aez_A 174 GHQARVGCLSW-NRHVLSSGSRS-----GAIHHHDVRIANHQIGTLQ-GHS--SEVCGLAWRSDGLQLASGGND------ 238 (401)
T ss_dssp CCSSCEEEEEE-ETTEEEEEETT-----SEEEEEETTSSSCEEEEEE-CCS--SCEEEEEECTTSSEEEEEETT------
T ss_pred CCCCceEEEEE-CCCEEEEEcCC-----CCEEEEecccCcceeeEEc-CCC--CCeeEEEEcCCCCEEEEEeCC------
Confidence 11112223333 33567777754 3478888874332111110 111 111122222 56677777653
Q ss_pred cccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 204 GDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 204 ~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
..+..||+.+..-...-. ....+ -.+++. .+..+++.||... ...+.+||+.+..-..
T Consensus 239 ------~~v~iwd~~~~~~~~~~~--~~~~~--v~~~~~~p~~~~ll~~~~gs~----------d~~i~i~d~~~~~~~~ 298 (401)
T 4aez_A 239 ------NVVQIWDARSSIPKFTKT--NHNAA--VKAVAWCPWQSNLLATGGGTM----------DKQIHFWNAATGARVN 298 (401)
T ss_dssp ------SCEEEEETTCSSEEEEEC--CCSSC--CCEEEECTTSTTEEEEECCTT----------TCEEEEEETTTCCEEE
T ss_pred ------CeEEEccCCCCCccEEec--CCcce--EEEEEECCCCCCEEEEecCCC----------CCEEEEEECCCCCEEE
Confidence 234566776654332221 11111 123333 3456777775322 1468999988765433
No 143
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=92.20 E-value=7.2 Score=40.63 Aligned_cols=164 Identities=14% Similarity=0.131 Sum_probs=84.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC--------CCcCCccEEEEEcCcEEEEEecCCCCcccccEEE
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL--------PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYV 157 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~--------p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~ 157 (501)
+..+|+..- ..+.+.++|..+.+=...-+.+.+ |.+|... .+...++..+++-= .....++.
T Consensus 255 Gk~l~v~n~-----~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~-i~~s~~~~~~vv~~----~~~g~v~~ 324 (567)
T 1qks_A 255 DKYAIAGAY-----WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAA-ILASHYRPEFIVNV----KETGKILL 324 (567)
T ss_dssp TTEEEEEEE-----ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEE-EEECSSSSEEEEEE----TTTTEEEE
T ss_pred CCEEEEEEc-----cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEE-EEEcCCCCEEEEEe----cCCCeEEE
Confidence 346777643 235678899888765443332221 2223222 22222223333321 12346888
Q ss_pred EECCCCceEEcccCCCCCCCCcceeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCCceEEeecC-CCCCCC
Q 010770 158 LDTISLEWMQLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLP-GQAPSS 234 (501)
Q Consensus 158 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~-g~~p~~ 234 (501)
.|..+.+...+. .++.++.-|.+... ++ ++|+.... -+.+.++|..+++-...-.. +..|.+
T Consensus 325 vd~~~~~~~~v~---~i~~~~~~~d~~~~pdgr~~~va~~~------------sn~V~ViD~~t~kl~~~i~vgg~~Php 389 (567)
T 1qks_A 325 VDYTDLNNLKTT---EISAERFLHDGGLDGSHRYFITAANA------------RNKLVVIDTKEGKLVAIEDTGGQTPHP 389 (567)
T ss_dssp EETTCSSEEEEE---EEECCSSEEEEEECTTSCEEEEEEGG------------GTEEEEEETTTTEEEEEEECSSSSBCC
T ss_pred EecCCCccceee---eeeccccccCceECCCCCEEEEEeCC------------CCeEEEEECCCCcEEEEEeccCcCCCC
Confidence 888776655544 34455666655544 33 45554322 15566779888865443334 455655
Q ss_pred ceeeEEEEe-CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc-----eEEcccC
Q 010770 235 RCGHTITSG-GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ-----WKRLPIG 285 (501)
Q Consensus 235 r~~~s~~~~-~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~-----W~~v~~~ 285 (501)
..+.....- ++.+|+.+-... +.|.++|..+.. |+.+...
T Consensus 390 g~g~~~~~p~~g~v~~t~~~g~-----------~~Vsvid~~~~~~~~~~~kvv~~i 435 (567)
T 1qks_A 390 GRGANFVHPTFGPVWATSHMGD-----------DSVALIGTDPEGHPDNAWKILDSF 435 (567)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEE
T ss_pred ccceeeECCCCCcEEEeCCCCC-----------CeEEEecCCCCCCccccCEEEEEE
Confidence 444333322 356776653221 458888877632 8766553
No 144
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=92.06 E-value=7.7 Score=36.16 Aligned_cols=137 Identities=15% Similarity=0.162 Sum_probs=62.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++..++.|+.++ .+..++............ ...........-.+..++.|+.++ .+.++|
T Consensus 96 ~dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d 156 (340)
T 4aow_A 96 SDGQFALSGSWDG-----TLRLWDLTTGTTTRRFVG---------HTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWN 156 (340)
T ss_dssp TTSSEEEEEETTS-----EEEEEETTTTEEEEEEEC---------CSSCEEEEEECTTSSCEEEEETTS-----CEEEEC
T ss_pred CCCCEEEEEcccc-----cceEEeecccceeeeecC---------CCCceeEEEEeecCccceeecCCC-----eEEEEE
Confidence 3345556665433 366677776655443321 111111222222445566665433 466677
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEE---cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEE
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAI---GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~---~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (501)
.....-..... .........+.+ ....+++.|+.+. .+.+||..+.+....-. + ... .-.+++.
T Consensus 157 ~~~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~~~s~~~d~-----~i~i~d~~~~~~~~~~~-~--h~~-~v~~~~~ 223 (340)
T 4aow_A 157 TLGVCKYTVQD----ESHSEWVSCVRFSPNSSNPIIVSCGWDK-----LVKVWNLANCKLKTNHI-G--HTG-YLNTVTV 223 (340)
T ss_dssp TTSCEEEEECS----SSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTTEEEEEEC-C--CSS-CEEEEEE
T ss_pred eCCCceEEEEe----ccccCcccceEEccCCCCcEEEEEcCCC-----EEEEEECCCCceeeEec-C--CCC-cEEEEEE
Confidence 76554333321 111111122222 2335666666543 37888988776544321 1 111 1112222
Q ss_pred e-CCEEEEEcccC
Q 010770 186 V-EKRLLIYGGRG 197 (501)
Q Consensus 186 ~-~~~lyv~GG~~ 197 (501)
. ++++++.|+..
T Consensus 224 s~~~~~l~s~s~D 236 (340)
T 4aow_A 224 SPDGSLCASGGKD 236 (340)
T ss_dssp CTTSSEEEEEETT
T ss_pred CCCCCEEEEEeCC
Confidence 2 56677777653
No 145
>1qhu_A Protein (hemopexin); beta propeller, HAEM binding and transport, iron metabolism, binding protein; HET: HEM; 2.30A {Oryctolagus cuniculus} SCOP: b.66.1.1 b.66.1.1 PDB: 1qjs_A*
Probab=91.75 E-value=12 Score=37.72 Aligned_cols=59 Identities=15% Similarity=0.217 Sum_probs=38.0
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
++.+|+|-| +..|.||..+++...- .-..+|. ..++...++++|+|-| +..|+||..+.
T Consensus 158 ~~~~yfFkG-------~~yw~yd~~~~~~~~~-~w~gi~~----iDAA~~~~g~~YfFkG-------~~y~rfd~~~~ 216 (460)
T 1qhu_A 158 DEGILFFQG-------NRKWFWDLTTGTKKER-SWPAVGN----CTSALRWLGRYYCFQG-------NQFLRFNPVSG 216 (460)
T ss_dssp SSEEEEEET-------TEEEEEETTTTEEEEE-CCTTSCC----CSEEEEETTEEEEEET-------TEEEEECTTTC
T ss_pred CCeEEEEec-------ccEEEEecccceeecc-cCCCCCc----cchheeeCCceEEEEC-------CEEEEEcCccC
Confidence 678888877 4689999998876532 1222332 2333433579999987 34777876543
No 146
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=91.56 E-value=15 Score=41.89 Aligned_cols=111 Identities=9% Similarity=-0.033 Sum_probs=59.2
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++..++.||.+ ..+.+||..+++-...-. .........+..-++..++.|+.+ ..+.++|
T Consensus 625 ~~~~~l~s~~~d-----~~i~vw~~~~~~~~~~~~---------~h~~~v~~~~~s~~~~~l~s~~~d-----~~v~vwd 685 (1249)
T 3sfz_A 625 QDGQRIASCGAD-----KTLQVFKAETGEKLLDIK---------AHEDEVLCCAFSSDDSYIATCSAD-----KKVKIWD 685 (1249)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTCCEEEEEC---------CCSSCEEEEEECTTSSEEEEEETT-----SEEEEEE
T ss_pred CCCCEEEEEeCC-----CeEEEEECCCCCEEEEec---------cCCCCEEEEEEecCCCEEEEEeCC-----CeEEEEE
Confidence 446677777743 358899998876433211 111111122222256667777643 3588999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEEc--CcEEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
..+++....-. .. ...-.+++... ++.+++.|+.++ .+.+||+.+.+...
T Consensus 686 ~~~~~~~~~~~---~~-~~~v~~~~~~~~~~~~~l~sg~~d~-----~v~vwd~~~~~~~~ 737 (1249)
T 3sfz_A 686 SATGKLVHTYD---EH-SEQVNCCHFTNKSNHLLLATGSNDF-----FLKLWDLNQKECRN 737 (1249)
T ss_dssp TTTCCEEEEEE---CC-SSCEEEEEECSSSSCCEEEEEETTS-----CEEEEETTSSSEEE
T ss_pred CCCCceEEEEc---CC-CCcEEEEEEecCCCceEEEEEeCCC-----eEEEEECCCcchhh
Confidence 98876544322 11 11112222222 335666666543 37888988776543
No 147
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=91.46 E-value=1.4 Score=42.57 Aligned_cols=70 Identities=11% Similarity=0.164 Sum_probs=37.9
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCC-ccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRD-FAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~-~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++.+++.|+.+ ..+.+||..++.|..+.. +..... -.+++...++.+++.|+.++ .+.+||+.+..
T Consensus 22 ~g~~l~~~~~d-----~~i~iw~~~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~s~d~-----~v~vwd~~~~~ 88 (377)
T 3dwl_C 22 QRTEFVTTTAT-----NQVELYEQDGNGWKHART---FSDHDKIVTCVDWAPKSNRIVTCSQDR-----NAYVYEKRPDG 88 (377)
T ss_dssp SSSEEECCCSS-----SCBCEEEEETTEEEECCC---BCCCSSCEEEEEECTTTCCEEEEETTS-----SEEEC------
T ss_pred CCCEEEEecCC-----CEEEEEEccCCceEEEEE---EecCCceEEEEEEeCCCCEEEEEeCCC-----eEEEEEcCCCC
Confidence 55667777643 356788888888877654 222222 22333445667778887653 47888888776
Q ss_pred -eEEc
Q 010770 165 -WMQL 168 (501)
Q Consensus 165 -W~~~ 168 (501)
|...
T Consensus 89 ~~~~~ 93 (377)
T 3dwl_C 89 TWKQT 93 (377)
T ss_dssp CCCCE
T ss_pred ceeee
Confidence 4443
No 148
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=91.41 E-value=1.3 Score=47.88 Aligned_cols=96 Identities=10% Similarity=0.059 Sum_probs=53.5
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE-cC--cEEEEEecCCCCcccccEEEEECCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GN--RKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~--~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
++..++.||.+ ..+.+||..+.++..+.. +......-.++.+ .+ +..++.|+.++ .+.+||+.+
T Consensus 20 dg~~latg~~d-----g~I~vwd~~~~~~~~~~~---l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg-----~I~vwd~~~ 86 (753)
T 3jro_A 20 YGKRLATCSSD-----KTIKIFEVEGETHKLIDT---LTGHEGPVWRVDWAHPKFGTILASCSYDG-----KVLIWKEEN 86 (753)
T ss_dssp SSCCEEEEETT-----TEEEEEEEETTEEEEEEE---ECCCSSCEEEEEECCTTSCSEEEEEETTS-----CEEEEEEET
T ss_pred CCCeEEEEECC-----CcEEEEecCCCCCcccee---ccCCcCceEEEEecCCCCCCEEEEEeCCC-----eEEEEECCC
Confidence 45566666643 357888888777776654 2222222222333 33 57778887654 388899999
Q ss_pred CceEEcccCCCCCCCCcceeEEEe--C--CEEEEEcccC
Q 010770 163 LEWMQLPVTGSVPPPRCGHTATMV--E--KRLLIYGGRG 197 (501)
Q Consensus 163 ~~W~~~~~~~~~p~~r~~~~~~~~--~--~~lyv~GG~~ 197 (501)
++|..+.. ..........+.+ + +.+++.|+..
T Consensus 87 ~~~~~~~~---~~~h~~~V~~v~~sp~~~~~~l~sgs~d 122 (753)
T 3jro_A 87 GRWSQIAV---HAVHSASVNSVQWAPHEYGPLLLVASSD 122 (753)
T ss_dssp TEEEEEEE---ECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred Cccccccc---ccCCCCCeEEEEECCCCCCCEEEEEeCC
Confidence 88776652 2211222222222 3 5677777653
No 149
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=91.38 E-value=11 Score=36.58 Aligned_cols=108 Identities=16% Similarity=0.088 Sum_probs=60.3
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.+++.++.|+.+ ..+.+||+.+.+-...-. ... ..-.+++.. ++..++.|+.+ ..+.++
T Consensus 133 ~dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~---------~h~-~~v~~~~~~p~~~~l~s~s~d-----~~v~iw 192 (393)
T 1erj_A 133 PDGKFLATGAED-----RLIRIWDIENRKIVMILQ---------GHE-QDIYSLDYFPSGDKLVSGSGD-----RTVRIW 192 (393)
T ss_dssp TTSSEEEEEETT-----SCEEEEETTTTEEEEEEC---------CCS-SCEEEEEECTTSSEEEEEETT-----SEEEEE
T ss_pred CCCCEEEEEcCC-----CeEEEEECCCCcEEEEEc---------cCC-CCEEEEEEcCCCCEEEEecCC-----CcEEEE
Confidence 456677777753 358889998876543221 011 111223222 45556666643 358889
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
|+.+++...... .. ....+++... ++.+++.|+.++ .+.+||+.+..-.
T Consensus 193 d~~~~~~~~~~~---~~--~~v~~~~~~~~~~~~l~~~s~d~-----~v~iwd~~~~~~~ 242 (393)
T 1erj_A 193 DLRTGQCSLTLS---IE--DGVTTVAVSPGDGKYIAAGSLDR-----AVRVWDSETGFLV 242 (393)
T ss_dssp ETTTTEEEEEEE---CS--SCEEEEEECSTTCCEEEEEETTS-----CEEEEETTTCCEE
T ss_pred ECCCCeeEEEEE---cC--CCcEEEEEECCCCCEEEEEcCCC-----cEEEEECCCCcEE
Confidence 998887554332 11 1112233333 667888888654 3788898877643
No 150
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=91.14 E-value=9.1 Score=36.03 Aligned_cols=195 Identities=12% Similarity=0.086 Sum_probs=94.6
Q ss_pred cCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC
Q 010770 44 FLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (501)
Q Consensus 44 ~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 123 (501)
....+|++|..+++-..+. .......+-+++.+++....+......++++|+.+++...+.. .
T Consensus 41 ~~~~l~~~d~~~~~~~~l~--------------~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~---~ 103 (347)
T 2gop_A 41 YENTIVIENLKNNARRFIE--------------NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILE---A 103 (347)
T ss_dssp EEEEEEEEETTTCCEEEEE--------------SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEE---E
T ss_pred ccceEEEEeCCCCceEEcc--------------cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEc---C
Confidence 4577999999988765541 1112222224443333332221223469999999988877764 2
Q ss_pred CCcCCccEEEEEcCcEEEEEecCC------------------CC----cccccEEEEECCCCce-EEcccCCCCCCCCcc
Q 010770 124 PSPRDFAAASAIGNRKIVMYGGWD------------------GK----KWLSDVYVLDTISLEW-MQLPVTGSVPPPRCG 180 (501)
Q Consensus 124 p~~r~~~~~~~~~~~~iyv~GG~~------------------~~----~~~~~~~~yd~~t~~W-~~~~~~~~~p~~r~~ 180 (501)
+. ....+...+++.+++.... +. .....++++|+.+.+. ..+. . + ..
T Consensus 104 ~~---~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~---~-~---~~ 173 (347)
T 2gop_A 104 KN---IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFE---K-P---RF 173 (347)
T ss_dssp SE---EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEE---E-E---TT
T ss_pred CC---ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeec---C-C---Cc
Confidence 21 2233333455444443321 00 1135689999999887 6665 2 2 22
Q ss_pred eeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCC-EEEEEcCCCCCCCC
Q 010770 181 HTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGH-YLLLFGGHGTGGWL 259 (501)
Q Consensus 181 ~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~-~i~v~GG~~~~~~~ 259 (501)
.......+.+++.+......... +....++.+| +.+++.+.. . .. ..+. .-++ .|++.+.....+
T Consensus 174 ~~~~~spdg~~~~~~~~~~~~~~---~~~~~l~~~d--~~~~~~l~~---~--~~-~~~~-spdg~~l~~~~~~~~~~-- 239 (347)
T 2gop_A 174 SSGIWHRDKIVVNVPHREIIPQY---FKFWDIYIWE--DGKEEKMFE---K--VS-FYAV-DSDGERILLYGKPEKKY-- 239 (347)
T ss_dssp CEEEEETTEEEEEEECCCSSCCS---SCCEEEEEEE--TTEEEEEEE---E--ES-EEEE-EECSSCEEEEECCSSSC--
T ss_pred ccccCCCCeEEEEEecccccccc---cccccEEEeC--CCceEEecc---C--cc-eeeE-CCCCCEEEEEEccccCC--
Confidence 23333333355555332211000 0012344456 666776652 1 11 1122 4344 444444222111
Q ss_pred cccccccCeEEEEEcCCCceEEccc
Q 010770 260 SRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
......+|++| +..+..+..
T Consensus 240 ---~~~~~~l~~~d--~~~~~~l~~ 259 (347)
T 2gop_A 240 ---MSEHNKLYIYD--GKEVMGILD 259 (347)
T ss_dssp ---CCSSCEEEEEC--SSCEEESST
T ss_pred ---ccccceEEEEC--CCceEeccc
Confidence 11236799999 666776654
No 151
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=91.13 E-value=3.8 Score=38.61 Aligned_cols=156 Identities=10% Similarity=0.011 Sum_probs=82.7
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
+++||+.+... ..+++||+.+++...+.. . ....-++++...++.+|+.+..+. .....+++||+.+...
T Consensus 55 ~g~l~~~~~~~-----~~i~~~d~~~~~~~~~~~---~-~~~~~~~i~~~~dg~l~v~~~~~~-~~~~~i~~~d~~~~~~ 124 (333)
T 2dg1_A 55 QGQLFLLDVFE-----GNIFKINPETKEIKRPFV---S-HKANPAAIKIHKDGRLFVCYLGDF-KSTGGIFAATENGDNL 124 (333)
T ss_dssp TSCEEEEETTT-----CEEEEECTTTCCEEEEEE---C-SSSSEEEEEECTTSCEEEEECTTS-SSCCEEEEECTTSCSC
T ss_pred CCCEEEEECCC-----CEEEEEeCCCCcEEEEee---C-CCCCcceEEECCCCcEEEEeCCCC-CCCceEEEEeCCCCEE
Confidence 56788876532 468999999988877642 1 112233444445678888754321 1224699999998876
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe-
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG- 243 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~- 243 (501)
..+.. .......-..++.. ++++|+.......... ...++++|+.+.+...+... . ....+++..
T Consensus 125 ~~~~~--~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~------~~~l~~~~~~~~~~~~~~~~--~---~~~~~i~~~~ 191 (333)
T 2dg1_A 125 QDIIE--DLSTAYCIDDMVFDSKGGFYFTDFRGYSTNP------LGGVYYVSPDFRTVTPIIQN--I---SVANGIALST 191 (333)
T ss_dssp EEEEC--SSSSCCCEEEEEECTTSCEEEEECCCBTTBC------CEEEEEECTTSCCEEEEEEE--E---SSEEEEEECT
T ss_pred EEEEc--cCccCCcccceEECCCCCEEEEeccccccCC------CceEEEEeCCCCEEEEeecC--C---CcccceEECC
Confidence 64321 11111111223333 5678875432111000 13456678877776655311 0 112233332
Q ss_pred C-CEEEEEcCCCCCCCCcccccccCeEEEEEcCC
Q 010770 244 G-HYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (501)
Q Consensus 244 ~-~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (501)
+ ..+|+... ..+.+++||+.+
T Consensus 192 dg~~l~v~~~------------~~~~i~~~d~~~ 213 (333)
T 2dg1_A 192 DEKVLWVTET------------TANRLHRIALED 213 (333)
T ss_dssp TSSEEEEEEG------------GGTEEEEEEECT
T ss_pred CCCEEEEEeC------------CCCeEEEEEecC
Confidence 3 35777542 125689999854
No 152
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=91.02 E-value=7.5 Score=41.17 Aligned_cols=81 Identities=10% Similarity=-0.076 Sum_probs=42.4
Q ss_pred EEECCcEEEEEcccCCC----ccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCC
Q 010770 26 VNIGKSKVVVFGGLVDK----RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRL 101 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~----~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~ 101 (501)
....+++.++++..... .....++++|+.+++-..+..... ...+..+.+.+-+++.++++..
T Consensus 67 ~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~~~~SPdG~~la~~~~------ 133 (723)
T 1xfd_A 67 EISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV-------SNAKLQYAGWGPKGQQLIFIFE------ 133 (723)
T ss_dssp EECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC-------CSCCCSBCCBCSSTTCEEEEET------
T ss_pred EECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc-------ccccccccEECCCCCEEEEEEC------
Confidence 33344565566543322 124689999999887655542211 1111122222334444444332
Q ss_pred CcEEEEECCCCeEEEEec
Q 010770 102 GDFWVLDTDIWQWSELTS 119 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~ 119 (501)
.+++++|..+++..++..
T Consensus 134 ~~i~~~~~~~g~~~~~~~ 151 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVS 151 (723)
T ss_dssp TEEEEESSSSSCCEEEEC
T ss_pred CeEEEEECCCCceEEEec
Confidence 368888888777666653
No 153
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=90.73 E-value=3.5 Score=39.69 Aligned_cols=155 Identities=8% Similarity=0.059 Sum_probs=72.8
Q ss_pred EEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 83 VAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 83 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+...+..++.|+.+ ..+.++|+.+++-..............-.+++...++..++.|+.++ .+.++|+.+
T Consensus 89 ~~s~d~~l~~~s~d-----g~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~-----~i~iwd~~~ 158 (344)
T 4gqb_B 89 TWVGERGILVASDS-----GAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDI-----CIKVWDLAQ 158 (344)
T ss_dssp EEETTTEEEEEETT-----SEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTT
T ss_pred EEeCCCeEEEEECC-----CEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCC-----eEEEEECCC
Confidence 33444445566543 35788888776422211000000111123344445677888888654 378899888
Q ss_pred CceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCc-eeeE
Q 010770 163 LEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSR-CGHT 239 (501)
Q Consensus 163 ~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r-~~~s 239 (501)
++-...- .+ ..... .++... +..+++.|+.. ..+..||+.+.+-...- ...... .-.+
T Consensus 159 ~~~~~~~-~~--h~~~V-~~~~~~~~~~~~l~s~s~D------------~~v~iwd~~~~~~~~~~---~~~~~~~~~~~ 219 (344)
T 4gqb_B 159 QVVLSSY-RA--HAAQV-TCVAASPHKDSVFLSCSED------------NRILLWDTRCPKPASQI---GCSAPGYLPTS 219 (344)
T ss_dssp TEEEEEE-CC--CSSCE-EEEEECSSCTTEEEEEETT------------SCEEEEETTSSSCEEEC---C----CCCEEE
T ss_pred CcEEEEE-cC--cCCce-EEEEecCCCCCceeeeccc------------cccccccccccceeeee---ecceeecccee
Confidence 7644321 11 01111 112222 33577777653 23446677665543221 011111 1112
Q ss_pred EEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 240 ITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 240 ~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
++. .++.+++.|+.+ ..|.+||+.+.+
T Consensus 220 ~~~~p~~~~~l~sg~~d------------g~v~~wd~~~~~ 248 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDEN------------GTVSLVDTKSTS 248 (344)
T ss_dssp EEECSSCTTEEEEEETT------------SEEEEEESCC--
T ss_pred eeecCCCCcceEEeccC------------CcEEEEECCCCc
Confidence 222 345677777643 357888987653
No 154
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=90.68 E-value=9.8 Score=34.76 Aligned_cols=179 Identities=8% Similarity=-0.017 Sum_probs=91.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++.+|+.+... ...+.+||.....-..+.. +....-+.+++. ++++|+.... .+.+.+|
T Consensus 87 ~~g~l~v~~~~~----~~~i~~~d~~g~~~~~~~~----------~~~~~~~~i~~~~~g~l~v~~~~-----~~~i~~~ 147 (286)
T 1q7f_A 87 NSGDIIVTERSP----THQIQIYNQYGQFVRKFGA----------TILQHPRGVTVDNKGRIIVVECK-----VMRVIIF 147 (286)
T ss_dssp TTTEEEEEECGG----GCEEEEECTTSCEEEEECT----------TTCSCEEEEEECTTSCEEEEETT-----TTEEEEE
T ss_pred CCCeEEEEcCCC----CCEEEEECCCCcEEEEecC----------ccCCCceEEEEeCCCCEEEEECC-----CCEEEEE
Confidence 457888876321 2458888855433322211 111112333333 5678887532 2468899
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
|+.......+...+.. ..-.+++...++.+|+.+.. .+.+.+||+.......+...+... .-..++..
T Consensus 148 ~~~g~~~~~~~~~~~~---~~p~~i~~~~~g~l~v~~~~-----~~~i~~~~~~g~~~~~~~~~g~~~---~p~~i~~d~ 216 (286)
T 1q7f_A 148 DQNGNVLHKFGCSKHL---EFPNGVVVNDKQEIFISDNR-----AHCVKVFNYEGQYLRQIGGEGITN---YPIGVGINS 216 (286)
T ss_dssp CTTSCEEEEEECTTTC---SSEEEEEECSSSEEEEEEGG-----GTEEEEEETTCCEEEEESCTTTSC---SEEEEEECT
T ss_pred cCCCCEEEEeCCCCcc---CCcEEEEECCCCCEEEEECC-----CCEEEEEcCCCCEEEEEccCCccC---CCcEEEECC
Confidence 9876655555421111 12234444556789887542 346899998766555554222111 11233333
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFG 251 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~G 251 (501)
++++|+...... ..+.+||+....-..+.... +... -+++++ -++.+|+..
T Consensus 217 ~G~l~v~~~~~~-----------~~i~~~~~~g~~~~~~~~~~--~~~~-~~~i~~~~~g~l~vs~ 268 (286)
T 1q7f_A 217 NGEILIADNHNN-----------FNLTIFTQDGQLISALESKV--KHAQ-CFDVALMDDGSVVLAS 268 (286)
T ss_dssp TCCEEEEECSSS-----------CEEEEECTTSCEEEEEEESS--CCSC-EEEEEEETTTEEEEEE
T ss_pred CCCEEEEeCCCC-----------EEEEEECCCCCEEEEEcccC--CCCc-ceeEEECCCCcEEEEC
Confidence 568888764321 14567787655444444211 1111 223333 467888874
No 155
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=90.64 E-value=11 Score=35.09 Aligned_cols=176 Identities=10% Similarity=-0.035 Sum_probs=84.9
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccC------CCCCCcEEEEECCCCeEEEEec
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFG------SRRLGDFWVLDTDIWQWSELTS 119 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~------~~~~~~~~~yd~~t~~W~~~~~ 119 (501)
+.+++||+.++++..+..... ..+..|....++.-++++|+..-... ......++++++.. +...+..
T Consensus 73 ~~l~~~d~~~g~~~~~~~~~~-----~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g-~~~~~~~ 146 (297)
T 3g4e_A 73 TKFCALNWKEQSAVVLATVDN-----DKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDH-HVKKYFD 146 (297)
T ss_dssp TEEEEEETTTTEEEEEEECCT-----TCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTS-CEEEEEE
T ss_pred CeEEEEECCCCcEEEEEecCC-----CCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCC-CEEEEee
Confidence 468999999999887764321 11222332323333567776421111 11234688888763 3333322
Q ss_pred CCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEEC--CCCceEEcccCCCCCC-CCcceeEEEe-CCEEEEEc
Q 010770 120 FGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDT--ISLEWMQLPVTGSVPP-PRCGHTATMV-EKRLLIYG 194 (501)
Q Consensus 120 ~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~--~t~~W~~~~~~~~~p~-~r~~~~~~~~-~~~lyv~G 194 (501)
.. ......+...++ .+|+.... .+.+++||. .+........-...+. ...-..+++. +++||+..
T Consensus 147 --~~---~~pngi~~spdg~~lyv~~~~-----~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~ 216 (297)
T 3g4e_A 147 --QV---DISNGLDWSLDHKIFYYIDSL-----SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVAC 216 (297)
T ss_dssp --EE---SBEEEEEECTTSCEEEEEEGG-----GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEE
T ss_pred --cc---ccccceEEcCCCCEEEEecCC-----CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEE
Confidence 11 111234444444 67777542 345888875 4554432110001111 0111233333 57888864
Q ss_pred ccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEe---CCEEEEEcCC
Q 010770 195 GRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSG---GHYLLLFGGH 253 (501)
Q Consensus 195 G~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~---~~~i~v~GG~ 253 (501)
... ..+.+||+++.+....- ..|..+. .+++.. ++.|||....
T Consensus 217 ~~~------------~~v~~~d~~tG~~~~~i---~~p~~~~-t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 217 YNG------------GRVIRLDPVTGKRLQTV---KLPVDKT-TSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp ETT------------TEEEEECTTTCCEEEEE---ECSSSBE-EEEEEESGGGCEEEEEEBC
T ss_pred cCC------------CEEEEEcCCCceEEEEE---ECCCCCc-eEEEEeCCCCCEEEEEcCC
Confidence 221 34677899876654332 2332222 233332 2478887654
No 156
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=90.58 E-value=4.9 Score=37.65 Aligned_cols=153 Identities=10% Similarity=-0.067 Sum_probs=74.5
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEE----ccccC--------CCCCCcEEEEECCCCeE
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIF----GGRFG--------SRRLGDFWVLDTDIWQW 114 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~----GG~~~--------~~~~~~~~~yd~~t~~W 114 (501)
.+.+||+. ++...+..... ..+..+....++.-++.||+. |-... ......+++||+.+++.
T Consensus 108 ~v~~~~~~-g~~~~~~~~~~-----~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~ 181 (305)
T 3dr2_A 108 AITRSDAD-GQAHLLVGRYA-----GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL 181 (305)
T ss_dssp EEEEECTT-SCEEEEECEET-----TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC
T ss_pred EEEEECCC-CCEEEEEeccC-----CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE
Confidence 47788876 66655542211 001111122233336788885 43211 11235699999988887
Q ss_pred EEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEE
Q 010770 115 SELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLI 192 (501)
Q Consensus 115 ~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv 192 (501)
..+. . +. .-...+...++ .||+..........+.+++||+..............+... -..++.. +++||+
T Consensus 182 ~~~~-~--~~---~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~-pdgi~~d~~G~lwv 254 (305)
T 3dr2_A 182 QRMA-D--LD---HPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGL-PDGFCVDRGGWLWS 254 (305)
T ss_dssp EEEE-E--ES---SEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSC-CCSEEECTTSCEEE
T ss_pred EEEe-c--CC---CCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCC-CCeEEECCCCCEEE
Confidence 7664 1 11 11234444454 5777654221112356899998765432211100111111 1223333 567777
Q ss_pred EcccCCCCCcccccccccccccccCCCCceEEee
Q 010770 193 YGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (501)
Q Consensus 193 ~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~ 226 (501)
..+ ..+.+||++......+.
T Consensus 255 ~~~--------------~gv~~~~~~g~~~~~~~ 274 (305)
T 3dr2_A 255 SSG--------------TGVCVFDSDGQLLGHIP 274 (305)
T ss_dssp CCS--------------SEEEEECTTSCEEEEEE
T ss_pred ecC--------------CcEEEECCCCCEEEEEE
Confidence 541 23667788776666665
No 157
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=90.44 E-value=12 Score=35.20 Aligned_cols=106 Identities=15% Similarity=0.086 Sum_probs=58.6
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEEC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
+..++.|+.++ .+.+||..+.......... ..... -.+++.. ++..++.|+.+ ..+.+||.
T Consensus 54 g~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~-------~h~~~-v~~~~~~~~~~~l~s~~~d-----g~v~iwd~ 115 (368)
T 3mmy_A 54 GNFLIAGSWAN-----DVRCWEVQDSGQTIPKAQQ-------MHTGP-VLDVCWSDDGSKVFTASCD-----KTAKMWDL 115 (368)
T ss_dssp SEEEEEEETTS-----EEEEEEECTTSCEEEEEEE-------ECSSC-EEEEEECTTSSEEEEEETT-----SEEEEEET
T ss_pred ceEEEEECCCC-----cEEEEEcCCCCceeEEEec-------cccCC-EEEEEECcCCCEEEEEcCC-----CcEEEEEc
Confidence 37777777543 4788888863322211110 01111 1222222 55666666643 36889999
Q ss_pred CCCeEEEEecCCCCCCcCCccEEEE--EcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 110 DIWQWSELTSFGDLPSPRDFAAASA--IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
.+.+...... ....-.+++. ..++.+++.|+.++ .+.+||+.+.+
T Consensus 116 ~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~l~~~~~dg-----~i~vwd~~~~~ 162 (368)
T 3mmy_A 116 SSNQAIQIAQ-----HDAPVKTIHWIKAPNYSCVMTGSWDK-----TLKFWDTRSSN 162 (368)
T ss_dssp TTTEEEEEEE-----CSSCEEEEEEEECSSCEEEEEEETTS-----EEEEECSSCSS
T ss_pred CCCCceeecc-----ccCceEEEEEEeCCCCCEEEEccCCC-----cEEEEECCCCc
Confidence 9888666542 1112223333 35667788887653 48888887765
No 158
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=90.27 E-value=9.1 Score=36.67 Aligned_cols=29 Identities=10% Similarity=0.008 Sum_probs=19.0
Q ss_pred EEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 133 SAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 133 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
+...++..++.|+.++ .+.+||+.+.+-.
T Consensus 252 ~~~~~~~~l~~~~~dg-----~i~vwd~~~~~~~ 280 (408)
T 4a11_B 252 CFTSDGLHLLTVGTDN-----RMRLWNSSNGENT 280 (408)
T ss_dssp EECTTSSEEEEEETTS-----CEEEEETTTCCBC
T ss_pred EEcCCCCEEEEecCCC-----eEEEEECCCCccc
Confidence 3345566777777543 4889998876543
No 159
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=90.27 E-value=15 Score=36.27 Aligned_cols=67 Identities=9% Similarity=0.004 Sum_probs=38.7
Q ss_pred CEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
+.+++.|+.+ ..+.+||+.+.+....... . ....-.+++.. ++.+++.|+.+ ..+.+||+.+.+..
T Consensus 210 ~~~l~s~~~d-----~~i~vwd~~~~~~~~~~~~--~-h~~~v~~~~~s-d~~~l~s~~~d-----~~v~vwd~~~~~~~ 275 (450)
T 2vdu_B 210 HQFIITSDRD-----EHIKISHYPQCFIVDKWLF--G-HKHFVSSICCG-KDYLLLSAGGD-----DKIFAWDWKTGKNL 275 (450)
T ss_dssp CEEEEEEETT-----SCEEEEEESCTTCEEEECC--C-CSSCEEEEEEC-STTEEEEEESS-----SEEEEEETTTCCEE
T ss_pred CcEEEEEcCC-----CcEEEEECCCCceeeeeec--C-CCCceEEEEEC-CCCEEEEEeCC-----CeEEEEECCCCcEe
Confidence 6777777754 3688889877654332110 1 11111233333 66777777754 35888998887644
Q ss_pred E
Q 010770 167 Q 167 (501)
Q Consensus 167 ~ 167 (501)
.
T Consensus 276 ~ 276 (450)
T 2vdu_B 276 S 276 (450)
T ss_dssp E
T ss_pred e
Confidence 3
No 160
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.25 E-value=22 Score=38.10 Aligned_cols=195 Identities=10% Similarity=0.054 Sum_probs=102.7
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEE
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~ 105 (501)
+...++.|+|... .-+.+||+.+.++.... . .....-.+.+..++.|+|... +.++
T Consensus 69 ~~d~~g~lWigT~-------~Gl~~yd~~~~~f~~~~--~--------~~~~~i~~i~~~~g~lWigt~-------~Gl~ 124 (758)
T 3ott_A 69 VIIDNTYLYMGTD-------NGILVYNYRADRYEQPE--T--------DFPTDVRTMALQGDTLWLGAL-------NGLY 124 (758)
T ss_dssp EEETTTEEEEEET-------TEEEEEETTTTEECCCS--C--------CCCSCEEEEEEETTEEEEEET-------TEEE
T ss_pred EEcCCCcEEEEeC-------CCeEEEeCCCCEEECcc--c--------CCCceEEEEEecCCcEEEEcC-------Ccce
Confidence 3445577777431 23789999998775411 0 011111233345778887421 2588
Q ss_pred EEECCCCeEEEEecC-CCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCC-CCCcceeE
Q 010770 106 VLDTDIWQWSELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVP-PPRCGHTA 183 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~-~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p-~~r~~~~~ 183 (501)
+||+.+++....... ..++.. .-.+++...++.|+|.. .+.+++||+.+.++..+....... ....-.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~l~~~-~i~~i~~d~~g~lWigt-------~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i 196 (758)
T 3ott_A 125 TYQLQSRKLTSFDTRRNGLPNN-TIYSIIRTKDNQIYVGT-------YNGLCRYIPSNGKFEGIPLPVHSSQSNLFVNSL 196 (758)
T ss_dssp EEETTTCCEEEECHHHHCCSCS-CEEEEEECTTCCEEEEE-------TTEEEEEETTTTEEEEECCCCCTTCSSCCEEEE
T ss_pred eEeCCCCeEEEeccCCCCcCCC-eEEEEEEcCCCCEEEEe-------CCCHhhCccCCCceEEecCCCccccccceeEEE
Confidence 999999888877321 112221 11223333466888732 135899999999887664211100 01111223
Q ss_pred EEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCc
Q 010770 184 TMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLS 260 (501)
Q Consensus 184 ~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~ 260 (501)
... + +.|+|-. . ..+..||+.++++.... ..+.. .-.+++. .++.|+|-. .
T Consensus 197 ~~d~~~~~lWigt-~-------------~Gl~~~~~~~~~~~~~~---~l~~~-~i~~i~~d~~g~lWigT-~------- 250 (758)
T 3ott_A 197 LEDTTRQCVWIGT-E-------------GYLFQYFPSTGQIKQTE---AFHNN-SIKSLALDGNGDLLAGT-D------- 250 (758)
T ss_dssp EEETTTTEEEEEE-E-------------EEEEEEETTTTEEEEEE---EEEEE-EEEEEEECTTCCEEEEE-T-------
T ss_pred EEECCCCEEEEEE-C-------------CCCeEEcCCCCeEEecc---CCCCC-eEEEEEEcCCCCEEEEe-C-------
Confidence 333 2 4577621 1 23456788888887654 11111 1122222 245666632 1
Q ss_pred ccccccCeEEEEEcCCCceEEccc
Q 010770 261 RYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 261 ~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
+.+++||+.+..+..+..
T Consensus 251 ------~Gl~~~~~~~~~~~~~~~ 268 (758)
T 3ott_A 251 ------NGLYVYHNDTTPLQHIIH 268 (758)
T ss_dssp ------TEEEEECCTTSCCEEECC
T ss_pred ------CceeEEecCCCcEEEEEc
Confidence 247888888887776543
No 161
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=89.97 E-value=5.9 Score=37.27 Aligned_cols=107 Identities=13% Similarity=0.090 Sum_probs=53.5
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-C---CEEEEEccccCCCCCCcEEEE
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D---CHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~---~~iyv~GG~~~~~~~~~~~~y 107 (501)
.+++.|+... .-..+.+||..+++.......+ ....-.+++.. + +.+++.|+.+ ..+.+|
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~l~~~~~d-----g~i~iw 95 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLREIE---------KAKPIKCGTFGATSLQQRYLATGDFG-----GNLHIW 95 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEEEE---------ESSCEEEEECTTCCTTTCCEEEEETT-----SCEEEE
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceeeec---------ccCcEEEEEEcCCCCCCceEEEecCC-----CeEEEE
Confidence 6666776421 1245888999888765543211 11111222222 2 3667777644 357888
Q ss_pred ECCCCe--EEEEecCCCCCCcCCccEEEE------EcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 108 DTDIWQ--WSELTSFGDLPSPRDFAAASA------IGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 108 d~~t~~--W~~~~~~~~~p~~r~~~~~~~------~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
|..+.+ -..+.. . ...-.++.. ..++..++.|+.++ .+.+||+.+..
T Consensus 96 d~~~~~~~~~~~~~---~--~~~v~~~~~~~~~~~s~~~~~l~~~~~d~-----~i~vwd~~~~~ 150 (357)
T 3i2n_A 96 NLEAPEMPVYSVKG---H--KEIINAIDGIGGLGIGEGAPEIVTGSRDG-----TVKVWDPRQKD 150 (357)
T ss_dssp CTTSCSSCSEEECC---C--SSCEEEEEEESGGGCC-CCCEEEEEETTS-----CEEEECTTSCS
T ss_pred eCCCCCccEEEEEe---c--ccceEEEeeccccccCCCccEEEEEeCCC-----eEEEEeCCCCC
Confidence 887664 122211 0 111111211 13456777777543 47888888764
No 162
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=89.91 E-value=13 Score=34.93 Aligned_cols=212 Identities=9% Similarity=-0.108 Sum_probs=104.7
Q ss_pred cEEEEEC-CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccC--
Q 010770 23 HSAVNIG-KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFG-- 97 (501)
Q Consensus 23 h~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~-- 97 (501)
+.+++.. ++.|||.-.. ..+.+||+.++..+.+..... ..+. ..-+.+++. ++.||+.-....
T Consensus 83 ~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~~~~~~~~~-----~~~~-~~p~~i~~d~~~G~l~v~d~~~~~~ 150 (322)
T 2fp8_A 83 YDISYNLQNNQLYIVDCY------YHLSVVGSEGGHATQLATSVD-----GVPF-KWLYAVTVDQRTGIVYFTDVSTLYD 150 (322)
T ss_dssp EEEEEETTTTEEEEEETT------TEEEEECTTCEECEEEESEET-----TEEC-SCEEEEEECTTTCCEEEEESCSSCC
T ss_pred ceEEEcCCCCcEEEEECC------CCEEEEeCCCCEEEEecccCC-----CCcc-cccceEEEecCCCEEEEECCccccc
Confidence 3444453 6788887332 238899988776555532110 0111 122333333 568888632110
Q ss_pred ----------CCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCC---
Q 010770 98 ----------SRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL--- 163 (501)
Q Consensus 98 ----------~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~--- 163 (501)
......+++||+.+.+...+... + ..-...+...++ .||+.-.. .+.+++|++.+.
T Consensus 151 ~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~--~---~~p~gia~~~dg~~lyv~d~~-----~~~I~~~~~~~~~~~ 220 (322)
T 2fp8_A 151 DRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE--L---HVPGGAEVSADSSFVLVAEFL-----SHQIVKYWLEGPKKG 220 (322)
T ss_dssp TTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE--E---SCCCEEEECTTSSEEEEEEGG-----GTEEEEEESSSTTTT
T ss_pred ccccceehcccCCCceEEEEeCCCCEEEEeccC--C---ccCcceEECCCCCEEEEEeCC-----CCeEEEEECCCCcCC
Confidence 11235699999988876655321 1 112234444444 58876431 356899998753
Q ss_pred ceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE
Q 010770 164 EWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS 242 (501)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~ 242 (501)
+.+.+. ..+. -..++.. +++|||........ . ...-.-..+.+||+....-..+..+...+. ..-.+++.
T Consensus 221 ~~~~~~---~~~g---P~gi~~d~~G~l~va~~~~~~~-~-~~~~~~~~v~~~d~~G~~~~~~~~~~g~~~-~~~~~~~~ 291 (322)
T 2fp8_A 221 TAEVLV---KIPN---PGNIKRNADGHFWVSSSEELDG-N-MHGRVDPKGIKFDEFGNILEVIPLPPPFAG-EHFEQIQE 291 (322)
T ss_dssp CEEEEE---ECSS---EEEEEECTTSCEEEEEEEETTS-S-TTSCEEEEEEEECTTSCEEEEEECCTTTTT-SCCCEEEE
T ss_pred ccceEE---eCCC---CCCeEECCCCCEEEEecCcccc-c-ccCCCccEEEEECCCCCEEEEEECCCCCcc-ccceEEEE
Confidence 333332 1221 1223333 56788875331000 0 000001346677887655555553321111 12223445
Q ss_pred eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCC
Q 010770 243 GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 243 ~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
.++.|||.+.. .+.|.+|++..+
T Consensus 292 ~~g~L~v~~~~------------~~~i~~~~~~~~ 314 (322)
T 2fp8_A 292 HDGLLYIGTLF------------HGSVGILVYDKK 314 (322)
T ss_dssp ETTEEEEECSS------------CSEEEEEEC---
T ss_pred eCCEEEEeecC------------CCceEEEecccc
Confidence 67899986532 256888886543
No 163
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=89.89 E-value=13 Score=34.74 Aligned_cols=105 Identities=14% Similarity=0.187 Sum_probs=55.4
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCc----EEeceecCCCCCCCCCCCCcceeEEEEeCCE-EEEEccccCCCCCCc
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKL----WFQPECTGNGSNGQVGPGPRAFHIAVAIDCH-MFIFGGRFGSRRLGD 103 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~----W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~-iyv~GG~~~~~~~~~ 103 (501)
.++..++.|+.+ ..+.+||..+.. ...+.. ........+..-++. .++.|+.+ ..
T Consensus 21 ~~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~----------~~~~v~~~~~~~~~~~~l~~~~~d-----g~ 80 (342)
T 1yfq_A 21 PSKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR----------YKHPLLCCNFIDNTDLQIYVGTVQ-----GE 80 (342)
T ss_dssp GGGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE----------CSSCEEEEEEEESSSEEEEEEETT-----SC
T ss_pred CCCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee----------cCCceEEEEECCCCCcEEEEEcCC-----Ce
Confidence 345566666643 347788877665 332221 111122222333566 67777644 36
Q ss_pred EEEEEC-CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 104 FWVLDT-DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 104 ~~~yd~-~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+.+||+ .+.+...+.. .+....-.+++... +.+++.|+.++ .+.+||+.+
T Consensus 81 i~~wd~~~~~~~~~~~~---~~~~~~v~~l~~~~-~~~l~s~~~d~-----~i~iwd~~~ 131 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTN---NEANLGICRICKYG-DDKLIAASWDG-----LIEVIDPRN 131 (342)
T ss_dssp EEEECSSSSSSEEECBS---CCCCSCEEEEEEET-TTEEEEEETTS-----EEEEECHHH
T ss_pred EEEEEeccCCceEeccc---cCCCCceEEEEeCC-CCEEEEEcCCC-----eEEEEcccc
Confidence 889999 8877655431 11122223333344 46666776543 477777654
No 164
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=89.89 E-value=12 Score=34.69 Aligned_cols=65 Identities=12% Similarity=0.162 Sum_probs=35.4
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++.+++.|+.++ .+..++........... .............++..++.|+.++ .+..+|.....
T Consensus 97 dg~~l~s~~~d~-----~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~s~s~d~-----~~~~~d~~~~~ 161 (340)
T 4aow_A 97 DGQFALSGSWDG-----TLRLWDLTTGTTTRRFV----GHTKDVLSVAFSSDNRQIVSGSRDK-----TIKLWNTLGVC 161 (340)
T ss_dssp TSSEEEEEETTS-----EEEEEETTTTEEEEEEE----CCSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSCE
T ss_pred CCCEEEEEcccc-----cceEEeecccceeeeec----CCCCceeEEEEeecCccceeecCCC-----eEEEEEeCCCc
Confidence 556677776543 46778887776655442 1112222233334456666776543 35667765544
No 165
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=89.83 E-value=6.7 Score=44.73 Aligned_cols=69 Identities=10% Similarity=0.049 Sum_probs=41.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..+++|+.+ ..+.+||..+.+...... . ....-.+++...++..++.|+.++ .+.+||..+.+.
T Consensus 972 ~g~~l~~g~~~-----g~i~i~d~~~~~~~~~~~---~-h~~~v~~l~~s~dg~~l~s~~~dg-----~i~vwd~~~~~~ 1037 (1249)
T 3sfz_A 972 HLEYVAFGDED-----GAIKIIELPNNRVFSSGV---G-HKKAVRHIQFTADGKTLISSSEDS-----VIQVWNWQTGDY 1037 (1249)
T ss_dssp TSSEEEEEETT-----SCCEEEETTTTSCEEECC---C-CSSCCCCEEECSSSSCEEEECSSS-----BEEEEETTTTEE
T ss_pred CCCEEEEEcCC-----CCEEEEEcCCCceeeecc---c-CCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCce
Confidence 55666666643 357888888776443321 1 111223344445667777777543 488999998877
Q ss_pred EEc
Q 010770 166 MQL 168 (501)
Q Consensus 166 ~~~ 168 (501)
..+
T Consensus 1038 ~~~ 1040 (1249)
T 3sfz_A 1038 VFL 1040 (1249)
T ss_dssp ECC
T ss_pred EEE
Confidence 654
No 166
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=89.82 E-value=12 Score=36.82 Aligned_cols=63 Identities=8% Similarity=-0.075 Sum_probs=32.2
Q ss_pred EEEEccccCCCCCCcEEEEECCCCe---EEE--EecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCC
Q 010770 89 MFIFGGRFGSRRLGDFWVLDTDIWQ---WSE--LTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 89 iyv~GG~~~~~~~~~~~~yd~~t~~---W~~--~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+++.|+.+ ..+.+||+.+.. +.. .... ......-.+++... ++.+++.|+.+ ..+.+||+.+
T Consensus 196 ~l~s~~~d-----g~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~i~i~d~~~ 263 (430)
T 2xyi_A 196 YLLSASDD-----HTICLWDINATPKEHRVIDAKNIF--TGHTAVVEDVAWHLLHESLFGSVADD-----QKLMIWDTRN 263 (430)
T ss_dssp EEEEECTT-----SCEEEEETTSCCBGGGEEECSEEE--CCCSSCEEEEEECSSCTTEEEEEETT-----SEEEEEETTC
T ss_pred eEEEEeCC-----CeEEEEeCCCCCCCCceeccceee--cCCCCCEeeeEEeCCCCCEEEEEeCC-----CeEEEEECCC
Confidence 67777643 357888887621 111 1100 01111122333332 45677777654 3488899886
Q ss_pred C
Q 010770 163 L 163 (501)
Q Consensus 163 ~ 163 (501)
.
T Consensus 264 ~ 264 (430)
T 2xyi_A 264 N 264 (430)
T ss_dssp S
T ss_pred C
Confidence 5
No 167
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=89.61 E-value=17 Score=35.89 Aligned_cols=151 Identities=11% Similarity=0.082 Sum_probs=72.0
Q ss_pred EEEEEcccCCCccCCceEEEEcC--CCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEEE
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDID--NKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~--t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.+++.|+.+ ..+.+||.. ++.....-... ..+..-.+++. -++..++.|+. ...++.++
T Consensus 116 ~l~~~~~~d-----g~v~iwd~~~~~~~~~~~~~~~--------~~~~~v~~~~~sp~~~~l~~~~~-----~g~v~~~~ 177 (450)
T 2vdu_B 116 RLIACADSD-----KSLLVFDVDKTSKNVLKLRKRF--------CFSKRPNAISIAEDDTTVIIADK-----FGDVYSID 177 (450)
T ss_dssp EEEEEEGGG-----TEEEEEEECSSSSSCEEEEEEE--------ECSSCEEEEEECTTSSEEEEEET-----TSEEEEEE
T ss_pred EEEEEECCC-----CeEEEEECcCCCCceeeeeecc--------cCCCCceEEEEcCCCCEEEEEeC-----CCcEEEEe
Confidence 445777753 347788887 54433321100 01111122222 25566666653 23578888
Q ss_pred CCCCeEEE-EecCCCCC-CcCCccEEEEEcC---cEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeE
Q 010770 109 TDIWQWSE-LTSFGDLP-SPRDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTA 183 (501)
Q Consensus 109 ~~t~~W~~-~~~~~~~p-~~r~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~ 183 (501)
..+..... ... .+. ....-.+++...+ +.+++.|+.++ .+.+||+.+.+....-..+. .... .++
T Consensus 178 ~~~~~~~~~~~~--~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~h--~~~v-~~~ 247 (450)
T 2vdu_B 178 INSIPEEKFTQE--PILGHVSMLTDVHLIKDSDGHQFIITSDRDE-----HIKISHYPQCFIVDKWLFGH--KHFV-SSI 247 (450)
T ss_dssp TTSCCCSSCCCC--CSEECSSCEEEEEEEECTTSCEEEEEEETTS-----CEEEEEESCTTCEEEECCCC--SSCE-EEE
T ss_pred cCCcccccccce--eeecccCceEEEEEcCCCCCCcEEEEEcCCC-----cEEEEECCCCceeeeeecCC--CCce-EEE
Confidence 86654321 000 010 1111223344455 67888888653 48888988776443311111 1111 112
Q ss_pred EEeCCEEEEEcccCCCCCcccccccccccccccCCCCce
Q 010770 184 TMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (501)
Q Consensus 184 ~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W 222 (501)
+..++.+++.|+.. ..+..||..+.+.
T Consensus 248 ~~sd~~~l~s~~~d------------~~v~vwd~~~~~~ 274 (450)
T 2vdu_B 248 CCGKDYLLLSAGGD------------DKIFAWDWKTGKN 274 (450)
T ss_dssp EECSTTEEEEEESS------------SEEEEEETTTCCE
T ss_pred EECCCCEEEEEeCC------------CeEEEEECCCCcE
Confidence 22266666677643 2345566666554
No 168
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=89.50 E-value=15 Score=35.07 Aligned_cols=93 Identities=17% Similarity=0.075 Sum_probs=50.4
Q ss_pred CEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
+..++.|+.++ .+.++|+.+.+....-. . ....-.+++...++..++.|+.++ .+.+||+.+.+-.
T Consensus 210 g~~l~sgs~Dg-----~v~~wd~~~~~~~~~~~---~-h~~~v~~v~~~p~~~~l~s~s~D~-----~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 210 GNTFVSGGCDK-----KAMVWDMRSGQCVQAFE---T-HESDVNSVRYYPSGDAFASGSDDA-----TCRLYDLRADREV 275 (354)
T ss_dssp CCEEEEEETTS-----CEEEEETTTCCEEEEEC---C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEE
T ss_pred CCEEEEEeCCC-----eEEEEECCCCcEEEEec---C-CCCCeEEEEEeCCCCEEEEEeCCC-----eEEEEECCCCcEE
Confidence 46777777543 58889998877544321 1 111122333344567788888654 3788898876543
Q ss_pred EcccCCCCCCCCcceeEEEe--CCEEEEEccc
Q 010770 167 QLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (501)
Q Consensus 167 ~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (501)
..- ...........+.+ ++.+++.|+.
T Consensus 276 ~~~---~~~~~~~~~~~~~~s~~g~~l~~g~~ 304 (354)
T 2pbi_B 276 AIY---SKESIIFGASSVDFSLSGRLLFAGYN 304 (354)
T ss_dssp EEE---CCTTCCSCEEEEEECTTSSEEEEEET
T ss_pred EEE---cCCCcccceeEEEEeCCCCEEEEEEC
Confidence 332 11111222233333 5666666664
No 169
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=89.48 E-value=15 Score=35.09 Aligned_cols=145 Identities=10% Similarity=-0.005 Sum_probs=76.1
Q ss_pred EEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 88 ~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
.+++.|+.+ ..+.+||..+.+....... ......-.+++... ++.+++.|+.++ .+.++|+.+....
T Consensus 87 ~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~d~-----~i~iwd~~~~~~~ 154 (383)
T 3ei3_B 87 TTVAVGSKG-----GDIILWDYDVQNKTSFIQG--MGPGDAITGMKFNQFNTNQLFVSSIRG-----ATTLRDFSGSVIQ 154 (383)
T ss_dssp TEEEEEEBT-----SCEEEEETTSTTCEEEECC--CSTTCBEEEEEEETTEEEEEEEEETTT-----EEEEEETTSCEEE
T ss_pred CEEEEEcCC-----CeEEEEeCCCcccceeeec--CCcCCceeEEEeCCCCCCEEEEEeCCC-----EEEEEECCCCceE
Confidence 577777654 3588999988776655421 01122223344444 457777777543 4888999887766
Q ss_pred EcccCCCCCCC-CcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-e
Q 010770 167 QLPVTGSVPPP-RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (501)
Q Consensus 167 ~~~~~~~~p~~-r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~ 243 (501)
.+.. .... ..-.++... ++..++.|+.. ..+..||+....-..+.. .. . .-.+++. -
T Consensus 155 ~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~---h~-~-~v~~~~~~~ 214 (383)
T 3ei3_B 155 VFAK---TDSWDYWYCCVDVSVSRQMLATGDST------------GRLLLLGLDGHEIFKEKL---HK-A-KVTHAEFNP 214 (383)
T ss_dssp EEEC---CCCSSCCEEEEEEETTTTEEEEEETT------------SEEEEEETTSCEEEEEEC---SS-S-CEEEEEECS
T ss_pred EEec---cCCCCCCeEEEEECCCCCEEEEECCC------------CCEEEEECCCCEEEEecc---CC-C-cEEEEEECC
Confidence 6642 1111 111222222 45666666643 234556765444443331 11 1 1122333 2
Q ss_pred CCE-EEEEcCCCCCCCCcccccccCeEEEEEcCC
Q 010770 244 GHY-LLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (501)
Q Consensus 244 ~~~-i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (501)
++. +++.|+.+ ..+.+||+.+
T Consensus 215 ~~~~~l~s~~~d------------~~i~iwd~~~ 236 (383)
T 3ei3_B 215 RCDWLMATSSVD------------ATVKLWDLRN 236 (383)
T ss_dssp SCTTEEEEEETT------------SEEEEEEGGG
T ss_pred CCCCEEEEEeCC------------CEEEEEeCCC
Confidence 333 66777643 3588888876
No 170
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=89.45 E-value=11 Score=36.27 Aligned_cols=112 Identities=11% Similarity=0.087 Sum_probs=54.5
Q ss_pred EEEEcccCCC-----ccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEE
Q 010770 33 VVVFGGLVDK-----RFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 33 iyv~GG~~~~-----~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
+++.|...+. ..-..+.+||..+..-...... ......-.+++. -++.+++.|+.+ ..+.+
T Consensus 27 ~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~--------~~~~~~v~~~~~s~~~~~l~~~~~d-----g~v~v 93 (416)
T 2pm9_A 27 LLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIAS--------LQVDSKFNDLDWSHNNKIIAGALDN-----GSLEL 93 (416)
T ss_dssp EEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCC--------CCCSSCEEEEEECSSSSCEEEEESS-----SCEEE
T ss_pred EEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEE--------EecCCceEEEEECCCCCeEEEEccC-----CeEEE
Confidence 6777744331 2234688999887643211100 111111222222 255666666643 35788
Q ss_pred EECCCC--eEEEEecCCCCCCcCCccEEEEEcC-cEEEEEecCCCCcccccEEEEECCCCc
Q 010770 107 LDTDIW--QWSELTSFGDLPSPRDFAAASAIGN-RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 107 yd~~t~--~W~~~~~~~~~p~~r~~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
||..+. ....+... ......-.+++...+ +.+++.|+.++ .+.+||+.+.+
T Consensus 94 w~~~~~~~~~~~~~~~--~~h~~~v~~~~~~~~~~~~l~s~~~dg-----~v~iwd~~~~~ 147 (416)
T 2pm9_A 94 YSTNEANNAINSMARF--SNHSSSVKTVKFNAKQDNVLASGGNNG-----EIFIWDMNKCT 147 (416)
T ss_dssp ECCSSTTSCCCEEEEC--CCSSSCCCEEEECSSSTTBEEEECSSS-----CEEBCBTTTTS
T ss_pred eecccccccccchhhc--cCCccceEEEEEcCCCCCEEEEEcCCC-----eEEEEECCCCc
Confidence 888761 11122210 111112233444433 57777777543 37888887764
No 171
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=89.43 E-value=1.5 Score=43.56 Aligned_cols=98 Identities=9% Similarity=0.018 Sum_probs=52.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++.+++.|+.++ .+.++|+.+..-..+... ......-.+++.. .++.+++.|+.++ .+.++|+.+..
T Consensus 131 ~~~~lasGs~dg-----~i~lWd~~~~~~~~~~~~--~gH~~~V~~l~f~p~~~~~l~s~s~D~-----~v~iwd~~~~~ 198 (435)
T 4e54_B 131 HPSTVAVGSKGG-----DIMLWNFGIKDKPTFIKG--IGAGGSITGLKFNPLNTNQFYASSMEG-----TTRLQDFKGNI 198 (435)
T ss_dssp CTTCEEEEETTS-----CEEEECSSCCSCCEEECC--CSSSCCCCEEEECSSCTTEEEEECSSS-----CEEEEETTSCE
T ss_pred CCCEEEEEeCCC-----EEEEEECCCCCceeEEEc--cCCCCCEEEEEEeCCCCCEEEEEeCCC-----EEEEeeccCCc
Confidence 456778887554 478888877654333210 1111112233333 3556777777654 37788998877
Q ss_pred eEEcccCCCCCCCCcceeEEEe-CCEEEEEcccC
Q 010770 165 WMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRG 197 (501)
Q Consensus 165 W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~ 197 (501)
...+..... ......++... ++.+++.|+..
T Consensus 199 ~~~~~~~~~--~~~~~~~~~~~~~~~~l~~g~~d 230 (435)
T 4e54_B 199 LRVFASSDT--INIWFCSLDVSASSRMVVTGDNV 230 (435)
T ss_dssp EEEEECCSS--CSCCCCCEEEETTTTEEEEECSS
T ss_pred eeEEeccCC--CCccEEEEEECCCCCEEEEEeCC
Confidence 665542111 11122233333 56677777653
No 172
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=89.33 E-value=15 Score=34.75 Aligned_cols=192 Identities=10% Similarity=0.016 Sum_probs=92.8
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
+.+++.||.++ .+.+||..+++-...-.... .....-.|. ..++..++.|.++-. ...+..||..
T Consensus 48 ~~~l~sg~~Dg-----~v~iwd~~~~~~~~~~~~~~--v~~~~~~~~--~~s~s~D~~i~~w~~------~~~~~~~~~~ 112 (343)
T 3lrv_A 48 KWVCMCRCEDG-----ALHFTQLKDSKTITTITTPN--PRTGGEHPA--IISRGPCNRLLLLYP------GNQITILDSK 112 (343)
T ss_dssp EEEEEEEEETT-----EEEEEEESSSSCEEEEEEEC--CCTTCCCCS--EEEECSTTEEEEEET------TTEEEEEETT
T ss_pred CCEEEEECCCC-----cEEEEECCCCcEEEEEecCC--ceeeeeCCc--eEEecCCCeEEEEEc------cCceEEeecC
Confidence 56778887654 47788887664322111100 000000111 222333556666632 2356778887
Q ss_pred CCe-EEEEecCCCCCCcCCccEEEEEc--CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 111 IWQ-WSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 111 t~~-W~~~~~~~~~p~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
+.+ ..... .+....-.+++... ++.+++.|+.++ .+..||+.+.+-..+. .......-.+++..
T Consensus 113 ~~~~~~~~~----~~~~~~v~~~~~~~~~~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~---~~~~~~~i~~~~~~p 180 (343)
T 3lrv_A 113 TNKVLREIE----VDSANEIIYMYGHNEVNTEYFIWADNRG-----TIGFQSYEDDSQYIVH---SAKSDVEYSSGVLHK 180 (343)
T ss_dssp TCCEEEEEE----CCCSSCEEEEECCC---CCEEEEEETTC-----CEEEEESSSSCEEEEE---CCCSSCCCCEEEECT
T ss_pred CcceeEEee----cCCCCCEEEEEcCCCCCCCEEEEEeCCC-----cEEEEECCCCcEEEEE---ecCCCCceEEEEECC
Confidence 776 33332 11111122233333 557778788654 3888999887765443 11111112233333
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceE--EeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCCcccc
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT--QLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWLSRYD 263 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~--~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~~~~~ 263 (501)
++.+++.|+.. ..+..||+.+..-. .+. + .....-.+++. -++..++.|+ .
T Consensus 181 dg~~lasg~~d------------g~i~iwd~~~~~~~~~~~~--~--~h~~~v~~l~fs~~g~~l~s~~-~--------- 234 (343)
T 3lrv_A 181 DSLLLALYSPD------------GILDVYNLSSPDQASSRFP--V--DEEAKIKEVKFADNGYWMVVEC-D--------- 234 (343)
T ss_dssp TSCEEEEECTT------------SCEEEEESSCTTSCCEECC--C--CTTSCEEEEEECTTSSEEEEEE-S---------
T ss_pred CCCEEEEEcCC------------CEEEEEECCCCCCCccEEe--c--cCCCCEEEEEEeCCCCEEEEEe-C---------
Confidence 56777777653 23456677766533 222 1 01111123333 3445555555 2
Q ss_pred cccCeEEEEEcCCCc
Q 010770 264 IYYNDTIILDRLSAQ 278 (501)
Q Consensus 264 ~~~~~v~~yd~~~~~ 278 (501)
+.+.+||+.+..
T Consensus 235 ---~~v~iwd~~~~~ 246 (343)
T 3lrv_A 235 ---QTVVCFDLRKDV 246 (343)
T ss_dssp ---SBEEEEETTSST
T ss_pred ---CeEEEEEcCCCC
Confidence 258889987653
No 173
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=89.31 E-value=8.5 Score=36.90 Aligned_cols=216 Identities=11% Similarity=0.027 Sum_probs=102.3
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.+++.++|....++ ...+|++|+.+++-..+... +.......+..-+++.++++... ..++++|
T Consensus 45 pDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt~~---------~~~~~~~~~~spdg~~l~~~~~~-----~~l~~~d 108 (388)
T 3pe7_A 45 RDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLTEG---------RGDNTFGGFLSPDDDALFYVKDG-----RNLMRVD 108 (388)
T ss_dssp TTSCEEEEEECTTS--SCEEEEEETTTCEEEECCCS---------SCBCSSSCEECTTSSEEEEEETT-----TEEEEEE
T ss_pred CCCCEEEEEEcCCC--CceEEEEeCCCCceEEeeeC---------CCCCccceEEcCCCCEEEEEeCC-----CeEEEEE
Confidence 34555555543221 34799999999988776532 11111122233344433333321 4789999
Q ss_pred CCCCeEEEEecCCCCCCcCCccEE-EEEcCcEEEEEecCC-----------------CCcccccEEEEECCCCceEEccc
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAA-SAIGNRKIVMYGGWD-----------------GKKWLSDVYVLDTISLEWMQLPV 170 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~-~~~~~~~iyv~GG~~-----------------~~~~~~~~~~yd~~t~~W~~~~~ 170 (501)
+.+++-..+.. .|........ +.-.++..++.--.. .......++.+|+.+.+-..+..
T Consensus 109 ~~~g~~~~~~~---~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~ 185 (388)
T 3pe7_A 109 LATLEENVVYQ---VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ 185 (388)
T ss_dssp TTTCCEEEEEE---CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE
T ss_pred CCCCcceeeee---chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec
Confidence 99988766653 3333221121 122343333311000 01123679999999988776642
Q ss_pred CCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCC-ceeeEEEEeCCE-E
Q 010770 171 TGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS-RCGHTITSGGHY-L 247 (501)
Q Consensus 171 ~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~-r~~~s~~~~~~~-i 247 (501)
. .....+....- +++.+++.......... ..++.+|..+.....+. ..... ...+.+..-+++ |
T Consensus 186 ~----~~~~~~~~~sp~dg~~l~~~~~~~~~~~~------~~l~~~d~~~~~~~~l~---~~~~~~~~~~~~~spdg~~l 252 (388)
T 3pe7_A 186 E----NQWLGHPIYRPYDDSTVAFCHEGPHDLVD------ARMWLINEDGTNMRKVK---THAEGESCTHEFWVPDGSAL 252 (388)
T ss_dssp E----SSCEEEEEEETTEEEEEEEEECSCTTTSS------CSEEEEETTSCCCEESC---CCCTTEEEEEEEECTTSSCE
T ss_pred C----CccccccEECCCCCCEEEEEEecCCCCCc------ceEEEEeCCCCceEEee---eCCCCcccccceECCCCCEE
Confidence 1 11222222222 44444443322111111 24455577777666665 11111 111112223443 4
Q ss_pred EEEcCCCCCCCCcccccccCeEEEEEcCCCceEEccc
Q 010770 248 LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 248 ~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
+....... . ....++++|+.+..-+.+..
T Consensus 253 ~~~~~~~~-~-------~~~~l~~~d~~~g~~~~l~~ 281 (388)
T 3pe7_A 253 VYVSYLKG-S-------PDRFIYSADPETLENRQLTS 281 (388)
T ss_dssp EEEEEETT-C-------CCEEEEEECTTTCCEEEEEE
T ss_pred EEEecCCC-C-------CcceEEEEecCCCceEEEEc
Confidence 33332211 1 11259999999988766654
No 174
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=89.20 E-value=17 Score=35.43 Aligned_cols=96 Identities=16% Similarity=0.112 Sum_probs=51.9
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 125 (501)
+.|+++|..+++...+.... .+.......+..-++..++.|+.++ .+.++|+.+++-..... ...
T Consensus 125 ~tV~lWd~~tg~~~~~~~~~-------~~~~~V~sv~fspdg~~lasgs~Dg-----~v~iWd~~~~~~~~~~~---~h~ 189 (420)
T 4gga_A 125 NSVYLWSASSGDILQLLQME-------QPGEYISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRNMT---SHS 189 (420)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTCCEEEEEECTTSSEEEEEETTS-----CEEEEETTTTEEEEEEC---CCS
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCCcEEEEEECCCCCEEEEEECCC-----eEEEEEcCCCcEEEEEe---CCC
Confidence 46899999998876654321 1111111112222567777777543 58899998886544321 112
Q ss_pred cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 126 PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 126 ~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
.+ ..+... ++.+++.|+.+. .+..+|..+..
T Consensus 190 ~~--v~~~s~-~~~~l~sgs~d~-----~i~~~d~~~~~ 220 (420)
T 4gga_A 190 AR--VGSLSW-NSYILSSGSRSG-----HIHHHDVRVAE 220 (420)
T ss_dssp SC--EEEEEE-ETTEEEEEETTS-----EEEEEETTSSS
T ss_pred Cc--eEEEee-CCCEEEEEeCCC-----ceeEeeecccc
Confidence 21 222333 346777777543 36666765543
No 175
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=89.13 E-value=4 Score=39.31 Aligned_cols=109 Identities=13% Similarity=0.090 Sum_probs=60.1
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPS 125 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~ 125 (501)
..++++|+.+..+..+... .+.....+.+..-+++.+++...........++++|+.+++...+.. .+.
T Consensus 216 ~~l~~~d~~~~~~~~l~~~--------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~---~~~ 284 (396)
T 3c5m_A 216 ARMWLVNEDGSNVRKIKEH--------AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMV---MPP 284 (396)
T ss_dssp CCCEEEETTSCCCEESSCC--------CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEE---CCS
T ss_pred ceEEEEECCCCceeEeecc--------CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeee---CCC
Confidence 5799999988877665421 01111111222224543333333222222349999999988777763 222
Q ss_pred cCCccEEEEEc-CcEEEEEecCCC-----------CcccccEEEEECCCCceEEcc
Q 010770 126 PRDFAAASAIG-NRKIVMYGGWDG-----------KKWLSDVYVLDTISLEWMQLP 169 (501)
Q Consensus 126 ~r~~~~~~~~~-~~~iyv~GG~~~-----------~~~~~~~~~yd~~t~~W~~~~ 169 (501)
+..+... +++++++++.+. ......++.+|+.+.+...+.
T Consensus 285 ----~~~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~ 336 (396)
T 3c5m_A 285 ----CSHLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKLC 336 (396)
T ss_dssp ----EEEEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBCCEEE
T ss_pred ----CCCCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCceEEcc
Confidence 1234444 666666655321 112357999999988877665
No 176
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=89.11 E-value=15 Score=34.64 Aligned_cols=113 Identities=9% Similarity=-0.036 Sum_probs=62.1
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
+.+|+.+.. ...+++||+.+++...+.. +. .....+..-++++|+... ..+++||+.
T Consensus 61 ~~l~~~d~~-----~~~i~~~d~~~~~~~~~~~----------~~-~v~~i~~~~dg~l~v~~~-------~gl~~~d~~ 117 (326)
T 2ghs_A 61 GTAWWFNIL-----ERELHELHLASGRKTVHAL----------PF-MGSALAKISDSKQLIASD-------DGLFLRDTA 117 (326)
T ss_dssp TEEEEEEGG-----GTEEEEEETTTTEEEEEEC----------SS-CEEEEEEEETTEEEEEET-------TEEEEEETT
T ss_pred CEEEEEECC-----CCEEEEEECCCCcEEEEEC----------CC-cceEEEEeCCCeEEEEEC-------CCEEEEECC
Confidence 567776543 2468999999887655431 11 112222334678777531 249999999
Q ss_pred CCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEec-CCCCcccccEEEEECCCCceEEc
Q 010770 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGG-WDGKKWLSDVYVLDTISLEWMQL 168 (501)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG-~~~~~~~~~~~~yd~~t~~W~~~ 168 (501)
+++...+...............+...++.+|+... .........+++|| +.+...+
T Consensus 118 ~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~ 174 (326)
T 2ghs_A 118 TGVLTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKL 174 (326)
T ss_dssp TCCEEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEE
T ss_pred CCcEEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEe
Confidence 99888775321111111122334445667776432 11112345789999 5666554
No 177
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=88.85 E-value=6.4 Score=34.69 Aligned_cols=151 Identities=13% Similarity=0.208 Sum_probs=77.6
Q ss_pred EEEEeCCEEEEEccccCCCCCCcEEEEECCC--CeEEE--Eec-CCCCCCcCCccEEEEE-cCcEEEEEecCCCCccccc
Q 010770 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSE--LTS-FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSD 154 (501)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t--~~W~~--~~~-~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~ 154 (501)
+++.+++++|+|=| +-+|+++... ..... +.. -..+|... -++... .++++|+|-| +.
T Consensus 11 Ai~~~~g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~w~glP~~I--DAa~~~~~~~~~yfFkG-------~~ 74 (195)
T 1itv_A 11 AIAEIGNQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADKWPALPRKL--DSVFEEPLSKKLFFFSG-------RQ 74 (195)
T ss_dssp EEEEETTEEEEEET-------TEEEEECCSSSCCCEEEEEHHHHCTTSCSSC--SEEEECTTTCCEEEEET-------TE
T ss_pred EEEEeCCEEEEEEC-------CEEEEEECCccccCCCcEEhhhccCCCCCCc--cEEEEECCCCeEEEEeC-------CE
Confidence 34557999999966 3578887654 22222 211 12455432 222222 3568999987 45
Q ss_pred EEEEECCCCce-EEcccCCCCCC--CCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceE-----Eee
Q 010770 155 VYVLDTISLEW-MQLPVTGSVPP--PRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----QLK 226 (501)
Q Consensus 155 ~~~yd~~t~~W-~~~~~~~~~p~--~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~-----~~~ 226 (501)
.|+|+..+..- +.+..- .+|. .....++...++++|+|-|. ..++||..+++-. .+.
T Consensus 75 yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDAA~~~~~g~~yfFkg~--------------~ywr~d~~~~~~~~gyPr~i~ 139 (195)
T 1itv_A 75 VWVYTGASVLGPRRLDKL-GLGADVAQVTGALRSGRGKMLLFSGR--------------RLWRFDVKAQMVDPRSASEVD 139 (195)
T ss_dssp EEEEETTEEEEEEEGGGG-TCCTTCCCCCEEEECSTTEEEEEETT--------------EEEEEETTTTEECGGGCEEHH
T ss_pred EEEEcCCccCCCEEeeec-ccCCCccceeEEEEcCCCeEEEEeCC--------------EEEEEeCCcccccCCCccChh
Confidence 78887542111 112111 1222 13344444336899999763 2334565543211 111
Q ss_pred --cCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCce
Q 010770 227 --LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQW 279 (501)
Q Consensus 227 --~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W 279 (501)
-+| +|. ... ++...++.+|.|-| +..|+||..+..-
T Consensus 140 ~~w~G-vp~-~id-aa~~~~g~~Yffkg--------------~~y~~~~~~~~~v 177 (195)
T 1itv_A 140 RMFPG-VPL-DTH-DVFQFREKAYFCQD--------------RFYWRVSSRSELN 177 (195)
T ss_dssp HHSTT-SCS-SCS-EEEEETTEEEEEET--------------TEEEEEECCTTCC
T ss_pred hcCCC-CCC-CCC-EEEEeCCeEEEEeC--------------CEEEEEECCccEE
Confidence 011 222 222 44445689999887 4579999876653
No 178
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=88.64 E-value=9.7 Score=35.69 Aligned_cols=114 Identities=10% Similarity=0.034 Sum_probs=58.3
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe---CCEEEEEccccCCCCCCcEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFW 105 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~~~~ 105 (501)
.++..++.|+.++ .+.+||+.++....+.... ..... -.+++.. ++.+++.|+.+ ..+.
T Consensus 23 ~~g~~lasgs~D~-----~v~lwd~~~~~~~~~~~l~-------gH~~~-V~~v~~~~~~~~~~l~s~s~D-----~~v~ 84 (316)
T 3bg1_A 23 YYGTRLATCSSDR-----SVKIFDVRNGGQILIADLR-------GHEGP-VWQVAWAHPMYGNILASCSYD-----RKVI 84 (316)
T ss_dssp GGGCEEEEEETTT-----EEEEEEEETTEEEEEEEEE-------CCSSC-EEEEEECCGGGSSCEEEEETT-----SCEE
T ss_pred CCCCEEEEEeCCC-----eEEEEEecCCCcEEEEEEc-------CCCcc-EEEEEeCCCCCCCEEEEEECC-----CEEE
Confidence 3456777777543 4778888776543332211 01111 1222222 25667777654 3578
Q ss_pred EEECCCCeEEEEecCCCCCCcCCccEEEEEcC--cEEEEEecCCCCcccccEEEEECCCC-ceEE
Q 010770 106 VLDTDIWQWSELTSFGDLPSPRDFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISL-EWMQ 167 (501)
Q Consensus 106 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~ 167 (501)
++|+.+.+|..+..... ....-.+++...+ +.+++.|+.++ .+..+|..+. .|..
T Consensus 85 iWd~~~~~~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D~-----~i~lwd~~~~~~~~~ 142 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSDG-----AISLLTYTGEGQWEV 142 (316)
T ss_dssp EECCSSSCCCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSSS-----CEEEEEECSSSCEEE
T ss_pred EEECCCCcceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCCC-----CEEEEecCCCCCcce
Confidence 88888876655432111 1111123333333 56777777654 3667777654 4643
No 179
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=88.37 E-value=19 Score=34.83 Aligned_cols=106 Identities=12% Similarity=0.041 Sum_probs=58.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
+++.++.|+.+ ..+.++|+.+.+-...-. . ....-.+++...++..++.|+.+ ..+.+||+.+.+.
T Consensus 134 dg~~l~s~~~d-----~~i~iwd~~~~~~~~~~~---~-h~~~v~~~~~~p~~~~l~s~s~d-----~~v~iwd~~~~~~ 199 (393)
T 1erj_A 134 DGKFLATGAED-----RLIRIWDIENRKIVMILQ---G-HEQDIYSLDYFPSGDKLVSGSGD-----RTVRIWDLRTGQC 199 (393)
T ss_dssp TSSEEEEEETT-----SCEEEEETTTTEEEEEEC---C-CSSCEEEEEECTTSSEEEEEETT-----SEEEEEETTTTEE
T ss_pred CCCEEEEEcCC-----CeEEEEECCCCcEEEEEc---c-CCCCEEEEEEcCCCCEEEEecCC-----CcEEEEECCCCee
Confidence 56677777654 358899998886544321 1 11122334444555666777754 3478889988765
Q ss_pred EEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCce
Q 010770 166 MQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW 222 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W 222 (501)
...- ... ..-.+++.. ++++++.|+..+ .+..||..+..-
T Consensus 200 ~~~~---~~~--~~v~~~~~~~~~~~~l~~~s~d~------------~v~iwd~~~~~~ 241 (393)
T 1erj_A 200 SLTL---SIE--DGVTTVAVSPGDGKYIAAGSLDR------------AVRVWDSETGFL 241 (393)
T ss_dssp EEEE---ECS--SCEEEEEECSTTCCEEEEEETTS------------CEEEEETTTCCE
T ss_pred EEEE---EcC--CCcEEEEEECCCCCEEEEEcCCC------------cEEEEECCCCcE
Confidence 4432 111 111222222 467777776542 344567666543
No 180
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=88.03 E-value=17 Score=33.80 Aligned_cols=203 Identities=9% Similarity=-0.074 Sum_probs=96.4
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEECC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
.||+.+-. ...+++|++ ++....+.. +... -+..+.. ++++|+.... ...+.+||+.
T Consensus 58 ~l~~~d~~-----~~~i~~~~~-~g~~~~~~~----------~~~~-~~gl~~d~dG~l~v~~~~-----~~~v~~~~~~ 115 (305)
T 3dr2_A 58 TLVWSDLV-----GRRVLGWRE-DGTVDVLLD----------ATAF-TNGNAVDAQQRLVHCEHG-----RRAITRSDAD 115 (305)
T ss_dssp EEEEEETT-----TTEEEEEET-TSCEEEEEE----------SCSC-EEEEEECTTSCEEEEETT-----TTEEEEECTT
T ss_pred EEEEEECC-----CCEEEEEeC-CCCEEEEeC----------CCCc-cceeeECCCCCEEEEECC-----CCEEEEECCC
Confidence 46665432 235888888 455544432 1111 1223332 5678876321 1358888886
Q ss_pred CCeEEEEecCCCCCCcCCccEEEEEcCcEEEEE----ecCCC--------CcccccEEEEECCCCceEEcccCCCCCCCC
Q 010770 111 IWQWSELTSFGDLPSPRDFAAASAIGNRKIVMY----GGWDG--------KKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (501)
Q Consensus 111 t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~----GG~~~--------~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r 178 (501)
++.+.+...........-..++...++.||+. |-... ......+++||+.+.+.+.+. ...
T Consensus 116 -g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~---~~~--- 188 (305)
T 3dr2_A 116 -GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA---DLD--- 188 (305)
T ss_dssp -SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE---EES---
T ss_pred -CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe---cCC---
Confidence 66665542111101111234555567788885 32210 112357999999888887764 111
Q ss_pred cceeEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCC
Q 010770 179 CGHTATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (501)
Q Consensus 179 ~~~~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~ 256 (501)
.-..++.. + +.||+........ . -+.+.+||+..+...........+......-++..++.||+..+
T Consensus 189 ~p~gl~~spdg~~lyv~~~~~~~~-~------~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~~---- 257 (305)
T 3dr2_A 189 HPNGLAFSPDEQTLYVSQTPEQGH-G------SVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSSG---- 257 (305)
T ss_dssp SEEEEEECTTSSEEEEEECCC----C------CCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECCS----
T ss_pred CCcceEEcCCCCEEEEEecCCcCC-C------CCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEecC----
Confidence 11233333 3 3588765321100 0 03455667665443211100011111111112224556776431
Q ss_pred CCCcccccccCeEEEEEcCCCceEEccc
Q 010770 257 GWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
+.|++||+....-..+..
T Consensus 258 ----------~gv~~~~~~g~~~~~~~~ 275 (305)
T 3dr2_A 258 ----------TGVCVFDSDGQLLGHIPT 275 (305)
T ss_dssp ----------SEEEEECTTSCEEEEEEC
T ss_pred ----------CcEEEECCCCCEEEEEEC
Confidence 348999997766555543
No 181
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=87.68 E-value=31 Score=36.49 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=66.2
Q ss_pred EECCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcE
Q 010770 27 NIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDF 104 (501)
Q Consensus 27 ~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~ 104 (501)
+.+ +.||+.... ..++.+|..++ .|+.-...... ............+.++.++.||+... ...+
T Consensus 64 v~~-g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~v~v~~~------dg~l 129 (668)
T 1kv9_A 64 FHD-GVIYTSMSW------SRVIAVDAASGKELWRYDPEVAKV-KARTSCCDAVNRGVALWGDKVYVGTL------DGRL 129 (668)
T ss_dssp EET-TEEEEEEGG------GEEEEEETTTCCEEEEECCCCCGG-GGGGCTTCSCCCCCEEEBTEEEEECT------TSEE
T ss_pred EEC-CEEEEECCC------CeEEEEECCCChhceEECCCCCcc-ccccccccCCccceEEECCEEEEEcC------CCEE
Confidence 344 789987652 45889998776 67763211000 00000000011223456788887542 2469
Q ss_pred EEEECCCCe--EEEEecCCCCCC-cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEc
Q 010770 105 WVLDTDIWQ--WSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (501)
Q Consensus 105 ~~yd~~t~~--W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~ 168 (501)
+++|..+++ |+.-.. +.+. .....+.++. ++.+|+..+.........++.||..|.+ |+.-
T Consensus 130 ~alD~~tG~~~W~~~~~--~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 130 IALDAKTGKAIWSQQTT--DPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EEEETTTCCEEEEEECS--CTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCCEeeeeccC--CCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 999998875 876432 1111 1112223334 5588774332111234569999998876 8764
No 182
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=87.68 E-value=16 Score=33.27 Aligned_cols=147 Identities=10% Similarity=0.074 Sum_probs=71.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.+ ..+..||.. +-..... .+......+++...++. ++.|+.++ .+.+||+.+.+-
T Consensus 154 ~~~~l~~~~~d-----~~i~i~d~~--~~~~~~~---~~~~~~i~~~~~~~~~~-~~~~~~dg-----~i~i~d~~~~~~ 217 (313)
T 3odt_A 154 SENKFLTASAD-----KTIKLWQND--KVIKTFS---GIHNDVVRHLAVVDDGH-FISCSNDG-----LIKLVDMHTGDV 217 (313)
T ss_dssp TTTEEEEEETT-----SCEEEEETT--EEEEEEC---SSCSSCEEEEEEEETTE-EEEEETTS-----EEEEEETTTCCE
T ss_pred CCCEEEEEECC-----CCEEEEecC--ceEEEEe---ccCcccEEEEEEcCCCe-EEEccCCC-----eEEEEECCchhh
Confidence 56666676644 347778833 2222211 11222233444455667 66666543 488899887654
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-e
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~ 243 (501)
...-. .. . ..-.+++.. +++ ++.|+.. ..+..||+.+.+....- ..+..... +++. .
T Consensus 218 ~~~~~--~~-~-~~i~~~~~~~~~~-l~~~~~d------------g~v~iwd~~~~~~~~~~---~~~~~~i~-~~~~~~ 276 (313)
T 3odt_A 218 LRTYE--GH-E-SFVYCIKLLPNGD-IVSCGED------------RTVRIWSKENGSLKQVI---TLPAISIW-SVDCMS 276 (313)
T ss_dssp EEEEE--CC-S-SCEEEEEECTTSC-EEEEETT------------SEEEEECTTTCCEEEEE---ECSSSCEE-EEEECT
T ss_pred hhhhh--cC-C-ceEEEEEEecCCC-EEEEecC------------CEEEEEECCCCceeEEE---eccCceEE-EEEEcc
Confidence 33210 11 1 111222233 443 5555542 34567787777654433 11222222 2333 3
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEc
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
+++ ++.|+.+ ..+.+||+.+..+...
T Consensus 277 ~~~-~~~~~~d------------g~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 277 NGD-IIVGSSD------------NLVRIFSQEKSRWASE 302 (313)
T ss_dssp TSC-EEEEETT------------SCEEEEESCGGGCCC-
T ss_pred CCC-EEEEeCC------------CcEEEEeCCCCceeeh
Confidence 445 4455543 4688999888776543
No 183
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=87.57 E-value=32 Score=36.49 Aligned_cols=125 Identities=14% Similarity=0.165 Sum_probs=66.7
Q ss_pred EEEeCCEEEEEccccCCCCCCcEEEEECCCCe--EEEEecCCCC--CCc---CCccEEEEEcCcEEEEEecCCCCccccc
Q 010770 82 AVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGDL--PSP---RDFAAASAIGNRKIVMYGGWDGKKWLSD 154 (501)
Q Consensus 82 ~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--p~~---r~~~~~~~~~~~~iyv~GG~~~~~~~~~ 154 (501)
-++.++.||+... .+.++++|..+++ |+.-...... +.. ....+.+ +.+++||+... ...
T Consensus 73 P~v~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a-~~~~~v~v~~~------dg~ 139 (677)
T 1kb0_A 73 PVVVDGIMYVSAS------WSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVA-LWKGKVYVGAW------DGR 139 (677)
T ss_dssp CEEETTEEEEECG------GGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCE-EETTEEEEECT------TSE
T ss_pred CEEECCEEEEECC------CCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCce-EECCEEEEEcC------CCE
Confidence 3567899999865 2469999998875 8764321000 000 1112223 34558887532 245
Q ss_pred EEEEECCCCc--eEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCc--eEEee
Q 010770 155 VYVLDTISLE--WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPG--WTQLK 226 (501)
Q Consensus 155 ~~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~--W~~~~ 226 (501)
++.+|..|.+ |+.-.............+.++.++.+|+-.+....+ . -..+..||..+.+ |+.-.
T Consensus 140 l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~-~------~g~v~a~D~~tG~~~W~~~~ 208 (677)
T 1kb0_A 140 LIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYG-V------RGYITAYDAETGERKWRWFS 208 (677)
T ss_dssp EEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTC-C------BCEEEEEETTTCCEEEEEES
T ss_pred EEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccccC-C------CCEEEEEECCCCcEEEEecc
Confidence 9999998776 876431000011112223445688887754322111 0 1335667887664 77544
No 184
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=87.32 E-value=18 Score=33.40 Aligned_cols=121 Identities=10% Similarity=0.014 Sum_probs=61.9
Q ss_pred EEEEECCc-EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-C-CEEEEEcccc---C
Q 010770 24 SAVNIGKS-KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-D-CHMFIFGGRF---G 97 (501)
Q Consensus 24 ~~~~~~~~-~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~-~~iyv~GG~~---~ 97 (501)
.++...++ .+|+.++. ...++++|+.+++-...-..+. .......-+.++.. + +.+|+..... .
T Consensus 38 ~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~~~~~~~-----~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~ 107 (337)
T 1pby_B 38 VPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLGRIDLST-----PEERVKSLFGAALSPDGKTLAIYESPVRLEL 107 (337)
T ss_dssp CEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEEEEECCB-----TTEEEECTTCEEECTTSSEEEEEEEEEEECS
T ss_pred ceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEeeEEcCC-----cccccccccceEECCCCCEEEEEeccccccc
Confidence 34443334 67776542 2469999998876543221100 00000011122232 3 3677764211 0
Q ss_pred CC---CCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEECCCCceEE
Q 010770 98 SR---RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 98 ~~---~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
.. ..+.+++||+.+.+....... +...+.++...+++ ||+.+ ..++++|+.+.+-..
T Consensus 108 ~~~~~~~~~i~v~d~~~~~~~~~~~~-----~~~~~~~~~s~dg~~l~~~~--------~~i~~~d~~~~~~~~ 168 (337)
T 1pby_B 108 THFEVQPTRVALYDAETLSRRKAFEA-----PRQITMLAWARDGSKLYGLG--------RDLHVMDPEAGTLVE 168 (337)
T ss_dssp SCEEECCCEEEEEETTTTEEEEEEEC-----CSSCCCEEECTTSSCEEEES--------SSEEEEETTTTEEEE
T ss_pred ccccccCceEEEEECCCCcEEEEEeC-----CCCcceeEECCCCCEEEEeC--------CeEEEEECCCCcEee
Confidence 11 236799999998876544321 11223444444544 66652 459999999887553
No 185
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=87.17 E-value=32 Score=36.17 Aligned_cols=192 Identities=13% Similarity=0.098 Sum_probs=88.6
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++.+++.|+.+ ..+.++|+.++.-...-.. ........+..-++..++.|+.++ .+.++|
T Consensus 440 ~~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~~---------h~~~v~~~~~s~~~~~l~s~s~D~-----~i~iwd 500 (694)
T 3dm0_A 440 SDGQFALSGSWD-----GELRLWDLAAGVSTRRFVG---------HTKDVLSVAFSLDNRQIVSASRDR-----TIKLWN 500 (694)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEEEC---------CSSCEEEEEECTTSSCEEEEETTS-----CEEEEC
T ss_pred CCCCEEEEEeCC-----CcEEEEECCCCcceeEEeC---------CCCCEEEEEEeCCCCEEEEEeCCC-----EEEEEE
Confidence 445666666653 3578888887654332110 111111122222556666666443 467777
Q ss_pred CCCCeEEEEecCCCCCCcCCccEEEEE-cCc--EEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEE
Q 010770 109 TDIWQWSELTSFGDLPSPRDFAAASAI-GNR--KIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATM 185 (501)
Q Consensus 109 ~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~--~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~ 185 (501)
.....-..+... ....+....++.+ .++ .+++.|+.++ .+.+||+.+.+-...- .+ .... -.+++.
T Consensus 501 ~~~~~~~~~~~~--~~~h~~~v~~~~~~~~~~~~~l~s~s~d~-----~v~vwd~~~~~~~~~~-~~--h~~~-v~~v~~ 569 (694)
T 3dm0_A 501 TLGECKYTISEG--GEGHRDWVSCVRFSPNTLQPTIVSASWDK-----TVKVWNLSNCKLRSTL-AG--HTGY-VSTVAV 569 (694)
T ss_dssp TTSCEEEEECSS--TTSCSSCEEEEEECSCSSSCEEEEEETTS-----CEEEEETTTCCEEEEE-CC--CSSC-EEEEEE
T ss_pred CCCCcceeeccC--CCCCCCcEEEEEEeCCCCcceEEEEeCCC-----eEEEEECCCCcEEEEE-cC--CCCC-EEEEEE
Confidence 655433333211 1111111222333 222 4666676544 4788898876544321 01 1111 112222
Q ss_pred e-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCccccc
Q 010770 186 V-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDI 264 (501)
Q Consensus 186 ~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~ 264 (501)
. ++++++.|+..+ .+..+|+.+.+- +. .......-++++...+..++.++..
T Consensus 570 spdg~~l~sg~~Dg------------~i~iwd~~~~~~--~~---~~~~~~~v~~~~~sp~~~~l~~~~~---------- 622 (694)
T 3dm0_A 570 SPDGSLCASGGKDG------------VVLLWDLAEGKK--LY---SLEANSVIHALCFSPNRYWLCAATE---------- 622 (694)
T ss_dssp CTTSSEEEEEETTS------------BCEEEETTTTEE--EE---CCBCSSCEEEEEECSSSSEEEEEET----------
T ss_pred eCCCCEEEEEeCCC------------eEEEEECCCCce--EE---EecCCCcEEEEEEcCCCcEEEEEcC----------
Confidence 2 567777777542 344566665542 22 1111122334444433334444322
Q ss_pred ccCeEEEEEcCCCce
Q 010770 265 YYNDTIILDRLSAQW 279 (501)
Q Consensus 265 ~~~~v~~yd~~~~~W 279 (501)
+.+.+||+.+..-
T Consensus 623 --~~i~iwd~~~~~~ 635 (694)
T 3dm0_A 623 --HGIKIWDLESKSI 635 (694)
T ss_dssp --TEEEEEETTTTEE
T ss_pred --CCEEEEECCCCCC
Confidence 3478888877653
No 186
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=87.03 E-value=20 Score=33.58 Aligned_cols=231 Identities=10% Similarity=-0.023 Sum_probs=110.3
Q ss_pred CceEEEEcCCCcEEeceecCCCC-----CCC---C-CCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEECCCCeE
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGS-----NGQ---V-GPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQW 114 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~-----~~~---~-~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 114 (501)
..+++||+.++.+..+....... ++. . .+....-+.++.. ++.|||.-.. ..+.++|+.++..
T Consensus 40 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~------~~i~~~d~~~g~~ 113 (322)
T 2fp8_A 40 GRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCY------YHLSVVGSEGGHA 113 (322)
T ss_dssp SEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETT------TEEEEECTTCEEC
T ss_pred CeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECC------CCEEEEeCCCCEE
Confidence 45889999887776654221000 000 0 0000112444454 5789987321 2488899887766
Q ss_pred EEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCC------------CcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 115 SELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDG------------KKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 115 ~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~------------~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
+.+..............+++.. ++.||+.-.... ......+++||+.+.+...+.. .+ ....
T Consensus 114 ~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~--~~---~~p~ 188 (322)
T 2fp8_A 114 TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLK--EL---HVPG 188 (322)
T ss_dssp EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEE--EE---SCCC
T ss_pred EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEecc--CC---ccCc
Confidence 5554210100111223344445 678988643210 0123569999998887665431 11 1112
Q ss_pred eEEEe-C-CEEEEEcccCCCCCcccccccccccccccCCC---CceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCC
Q 010770 182 TATMV-E-KRLLIYGGRGGGGPIMGDLWALKGLIEEENET---PGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGT 255 (501)
Q Consensus 182 ~~~~~-~-~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t---~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~ 255 (501)
.++.. + +.|||.-... +.+.+|++.+ ...+.+. ..+. -..+++ .++.||+......
T Consensus 189 gia~~~dg~~lyv~d~~~------------~~I~~~~~~~~~~~~~~~~~---~~~g---P~gi~~d~~G~l~va~~~~~ 250 (322)
T 2fp8_A 189 GAEVSADSSFVLVAEFLS------------HQIVKYWLEGPKKGTAEVLV---KIPN---PGNIKRNADGHFWVSSSEEL 250 (322)
T ss_dssp EEEECTTSSEEEEEEGGG------------TEEEEEESSSTTTTCEEEEE---ECSS---EEEEEECTTSCEEEEEEEET
T ss_pred ceEECCCCCEEEEEeCCC------------CeEEEEECCCCcCCccceEE---eCCC---CCCeEECCCCCEEEEecCcc
Confidence 33333 3 3588763211 3455666654 2344333 1121 223343 4457887653210
Q ss_pred CCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 256 GGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 256 ~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
.... .......+.+||+....-..+......+ .....+++.-+++|||.+
T Consensus 251 ~~~~--~~~~~~~v~~~d~~G~~~~~~~~~~g~~-~~~~~~~~~~~g~L~v~~ 300 (322)
T 2fp8_A 251 DGNM--HGRVDPKGIKFDEFGNILEVIPLPPPFA-GEHFEQIQEHDGLLYIGT 300 (322)
T ss_dssp TSST--TSCEEEEEEEECTTSCEEEEEECCTTTT-TSCCCEEEEETTEEEEEC
T ss_pred cccc--cCCCccEEEEECCCCCEEEEEECCCCCc-cccceEEEEeCCEEEEee
Confidence 0000 0001356899998765555554321111 122334445688999875
No 187
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=86.63 E-value=33 Score=35.78 Aligned_cols=125 Identities=12% Similarity=0.104 Sum_probs=65.5
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEc-CCC--cEEeceecCCCCCCCCCCCC---cceeEEEE--eCCE----EEEEc
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDI-DNK--LWFQPECTGNGSNGQVGPGP---RAFHIAVA--IDCH----MFIFG 93 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~-~t~--~W~~l~~~~~~~~~~~~p~~---R~~h~~~~--~~~~----iyv~G 93 (501)
++.+ +.||+.+.+ ...++++|. .++ .|+.-..... ...+.. ......++ .++. ||+..
T Consensus 59 ~v~~-g~vyv~~~~-----~~~v~AlD~~~tG~~lW~~~~~~~~----~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t 128 (599)
T 1w6s_A 59 LVVD-GKMYIHTSF-----PNNTFALGLDDPGTILWQDKPKQNP----AARAVACCDLVNRGLAYWPGDGKTPALILKTQ 128 (599)
T ss_dssp EEET-TEEEEECST-----TTCEEEEETTCTTSEEEEECCCCCG----GGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC
T ss_pred EEEC-CEEEEEeCC-----CCEEEEEeCCCCCcEEEEECCCCCc----cccccccccccccceEEEecCCcceeEEEEEc
Confidence 3444 799998763 246899999 766 6876432110 000000 11122334 4666 87753
Q ss_pred cccCCCCCCcEEEEECCCCe--EEEEecCCCCCCc-CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEc
Q 010770 94 GRFGSRRLGDFWVLDTDIWQ--WSELTSFGDLPSP-RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (501)
Q Consensus 94 G~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~p~~-r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~ 168 (501)
. ...++++|..+++ |+.-.. ..... ....+.++. ++.||+-.+.........++.||..|.+ |+.-
T Consensus 129 ~------dg~l~AlDa~TG~~~W~~~~~--~~~~~~~~~ssP~v~-~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~ 199 (599)
T 1w6s_A 129 L------DGNVAALNAETGETVWKVENS--DIKVGSTLTIAPYVV-KDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAY 199 (599)
T ss_dssp T------TSEEEEEETTTCCEEEEEECC--CGGGTCBCCSCCEEE-TTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEE
T ss_pred C------CCEEEEEECCCCCEEEeecCC--CCCccceeecCCEEE-CCEEEEEecccccCCCCeEEEEECCCCcEEEEEc
Confidence 2 2468999998875 775421 11001 111222334 5577764332111124568999998776 8765
Q ss_pred c
Q 010770 169 P 169 (501)
Q Consensus 169 ~ 169 (501)
.
T Consensus 200 ~ 200 (599)
T 1w6s_A 200 A 200 (599)
T ss_dssp S
T ss_pred C
Confidence 3
No 188
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=86.32 E-value=25 Score=33.94 Aligned_cols=156 Identities=12% Similarity=-0.008 Sum_probs=76.4
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEE-----EecCCCCC-CcCCccEEEEEcCc-EEEEEecCCCCcccccEEEE
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSE-----LTSFGDLP-SPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVL 158 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-----~~~~~~~p-~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~y 158 (501)
++.+++.|+.+ ..+.+||..++.... +.. +. ....-.+++...++ .+++.|+.++ .+.+|
T Consensus 93 ~~~~l~s~s~d-----g~v~vw~~~~~~~~~~~~~~~~~---~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iw 159 (402)
T 2aq5_A 93 NDNVIASGSED-----CTVMVWEIPDGGLVLPLREPVIT---LEGHTKRVGIVAWHPTAQNVLLSAGCDN-----VILVW 159 (402)
T ss_dssp CTTEEEEEETT-----SEEEEEECCTTCCSSCBCSCSEE---EECCSSCEEEEEECSSBTTEEEEEETTS-----CEEEE
T ss_pred CCCEEEEEeCC-----CeEEEEEccCCCCccccCCceEE---ecCCCCeEEEEEECcCCCCEEEEEcCCC-----EEEEE
Confidence 56777777654 358888887764311 100 00 11112233333444 5777777654 48899
Q ss_pred ECCCCceEEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCcee
Q 010770 159 DTISLEWMQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG 237 (501)
Q Consensus 159 d~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~ 237 (501)
|+.+.+....-.. ......-.++... ++.+++.|+.. ..+..||+.+.+-...-..+ ....+..
T Consensus 160 d~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~~~d------------~~i~iwd~~~~~~~~~~~~~-~~~~~~~ 224 (402)
T 2aq5_A 160 DVGTGAAVLTLGP--DVHPDTIYSVDWSRDGALICTSCRD------------KRVRVIEPRKGTVVAEKDRP-HEGTRPV 224 (402)
T ss_dssp ETTTTEEEEEECT--TTCCSCEEEEEECTTSSCEEEEETT------------SEEEEEETTTTEEEEEEECS-SCSSSCC
T ss_pred ECCCCCccEEEec--CCCCCceEEEEECCCCCEEEEEecC------------CcEEEEeCCCCceeeeeccC-CCCCcce
Confidence 9988865543200 0011111222232 55666666643 33556787776543321011 1111122
Q ss_pred eEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 238 HTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 238 ~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
..+..-++.+++.|.... ....+.+||+.+..
T Consensus 225 ~~~~~~~~~~l~~g~~~~---------~d~~i~iwd~~~~~ 256 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSRM---------SERQVALWDTKHLE 256 (402)
T ss_dssp EEEECSTTEEEEEEECTT---------CCEEEEEEETTBCS
T ss_pred EEEEcCCCcEEEEeccCC---------CCceEEEEcCcccc
Confidence 222334667777763211 12468899987643
No 189
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=86.32 E-value=17 Score=32.18 Aligned_cols=142 Identities=13% Similarity=0.128 Sum_probs=70.6
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCC
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~ 102 (501)
++... +.+|+|=| +.+|+++.....+........ =+.+|. .--++... ++++|+|=| +
T Consensus 29 i~~~~-g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~---wp~Lp~--~iDAa~~~~~~~~iyfFkG-------~ 88 (207)
T 1pex_A 29 ITSLR-GETMIFKD-------RFFWRLHPQQVDAELFLTKSF---WPELPN--RIDAAYEHPSHDLIFIFRG-------R 88 (207)
T ss_dssp EEEET-TEEEEEET-------TEEEEECSSSSCCEEEEHHHH---CTTSCS--SCCEEEEETTTTEEEEEET-------T
T ss_pred EEeCC-CcEEEEEC-------CEEEEEeCCCcCCCceehhHh---ccCCCC--CccEEEEeccCCcEEEEcc-------C
Confidence 33444 78999877 557888765544332211100 001232 22233333 589999976 3
Q ss_pred cEEEEECCCCeE---EEEecCCCCCCcCCcc-EEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEE-----ccc-C
Q 010770 103 DFWVLDTDIWQW---SELTSFGDLPSPRDFA-AASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPV-T 171 (501)
Q Consensus 103 ~~~~yd~~t~~W---~~~~~~~~~p~~r~~~-~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-----~~~-~ 171 (501)
.+|+|+..+-.- ..+.. -.+|.....- +|... .++++|+|-| +..|+||..+++-.. ++. -
T Consensus 89 ~~w~~~~~~~~~gyPk~I~~-~GlP~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~~~~d~gyPr~i~~~~ 160 (207)
T 1pex_A 89 KFWALNGYDILEGYPKKISE-LGLPKEVKKISAAVHFEDTGKTLLFSG-------NQVWRYDDTNHIMDKDYPRLIEEDF 160 (207)
T ss_dssp EEEEESTTCCCTTCSEESTT-TTCCTTCCCCCEEEECTTTSEEEEEET-------TEEEEEETTTTEECSSCCCBHHHHS
T ss_pred EEEEEeCCeeccCCceeccc-cCCCCCCccccEEEEeCCCCEEEEEeC-------CEEEEEeCcCccccCCCCccHHHcC
Confidence 577776432110 12221 1244321122 23333 3579999977 458999987654221 000 0
Q ss_pred CCCCCCCcceeEEEeCCEEEEEccc
Q 010770 172 GSVPPPRCGHTATMVEKRLLIYGGR 196 (501)
Q Consensus 172 ~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (501)
..+| .... ++...++++|+|-|.
T Consensus 161 ~Gip-~~iD-aAf~~~g~~YfFkg~ 183 (207)
T 1pex_A 161 PGIG-DKVD-AVYEKNGYIYFFNGP 183 (207)
T ss_dssp TTSC-SCCS-EEEEETTEEEEEETT
T ss_pred CCCC-CCcc-EEEEcCCcEEEEECC
Confidence 0122 1223 333458999999773
No 190
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=86.24 E-value=22 Score=33.41 Aligned_cols=68 Identities=13% Similarity=0.058 Sum_probs=43.0
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++.|+.++ .+.+||+.+.+-..... ........+++...++.+++.|+.++ .+.+||+.+.+-
T Consensus 138 ~~~~l~s~s~dg-----~i~~wd~~~~~~~~~~~---~~~~~~i~~~~~~pdg~~lasg~~dg-----~i~iwd~~~~~~ 204 (343)
T 3lrv_A 138 NTEYFIWADNRG-----TIGFQSYEDDSQYIVHS---AKSDVEYSSGVLHKDSLLLALYSPDG-----ILDVYNLSSPDQ 204 (343)
T ss_dssp -CCEEEEEETTC-----CEEEEESSSSCEEEEEC---CCSSCCCCEEEECTTSCEEEEECTTS-----CEEEEESSCTTS
T ss_pred CCCEEEEEeCCC-----cEEEEECCCCcEEEEEe---cCCCCceEEEEECCCCCEEEEEcCCC-----EEEEEECCCCCC
Confidence 456677777443 58899998887654432 12222234455556778888888654 488999988764
Q ss_pred E
Q 010770 166 M 166 (501)
Q Consensus 166 ~ 166 (501)
.
T Consensus 205 ~ 205 (343)
T 3lrv_A 205 A 205 (343)
T ss_dssp C
T ss_pred C
Confidence 3
No 191
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=86.16 E-value=23 Score=37.36 Aligned_cols=64 Identities=11% Similarity=0.090 Sum_probs=36.5
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
++.+++.|+.+ ..+.++|+.+.+-...-. . ....-.+++...++..++.|+.++ .+.++|....
T Consensus 441 ~g~~l~sgs~D-----g~v~vwd~~~~~~~~~~~---~-h~~~v~~~~~s~~~~~l~s~s~D~-----~i~iwd~~~~ 504 (694)
T 3dm0_A 441 DGQFALSGSWD-----GELRLWDLAAGVSTRRFV---G-HTKDVLSVAFSLDNRQIVSASRDR-----TIKLWNTLGE 504 (694)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEE---C-CSSCEEEEEECTTSSCEEEEETTS-----CEEEECTTSC
T ss_pred CCCEEEEEeCC-----CcEEEEECCCCcceeEEe---C-CCCCEEEEEEeCCCCEEEEEeCCC-----EEEEEECCCC
Confidence 56777777654 358889998876443221 1 111122334445566777777654 3677776544
No 192
>1itv_A MMP9; adaptive molecular recognition, beta propeller, dimer, hydrolase; 1.95A {Homo sapiens} SCOP: b.66.1.1
Probab=86.15 E-value=17 Score=31.90 Aligned_cols=141 Identities=14% Similarity=0.192 Sum_probs=72.9
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCC--CcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCC
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~ 100 (501)
++.+. +.+|+|=| +.+|+++... ........... =+.+|. .--++... ++++|+|-|
T Consensus 12 i~~~~-g~~yfFkg-------~~~Wr~~~~~~~~~~~p~~Is~~---w~glP~--~IDAa~~~~~~~~~yfFkG------ 72 (195)
T 1itv_A 12 IAEIG-NQLYLFKD-------GKYWRFSEGRGSRPQGPFLIADK---WPALPR--KLDSVFEEPLSKKLFFFSG------ 72 (195)
T ss_dssp EEEET-TEEEEEET-------TEEEEECCSSSCCCEEEEEHHHH---CTTSCS--SCSEEEECTTTCCEEEEET------
T ss_pred EEEeC-CEEEEEEC-------CEEEEEECCccccCCCcEEhhhc---cCCCCC--CccEEEEECCCCeEEEEeC------
Confidence 34454 78999977 5688887765 23332221100 011232 12233333 678999977
Q ss_pred CCcEEEEECCCCeE-EEEecCCCCCCc--CCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE-----cc-cC
Q 010770 101 LGDFWVLDTDIWQW-SELTSFGDLPSP--RDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LP-VT 171 (501)
Q Consensus 101 ~~~~~~yd~~t~~W-~~~~~~~~~p~~--r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-----~~-~~ 171 (501)
+.+|+|+..+..- ..+... .+|.. ...+ |..-.++++|+|-| +..|+||..+++-.. ++ .=
T Consensus 73 -~~yw~~~~~~~~~Pk~i~~~-G~p~~~~~iDA-A~~~~~g~~yfFkg-------~~ywr~d~~~~~~~~gyPr~i~~~w 142 (195)
T 1itv_A 73 -RQVWVYTGASVLGPRRLDKL-GLGADVAQVTG-ALRSGRGKMLLFSG-------RRLWRFDVKAQMVDPRSASEVDRMF 142 (195)
T ss_dssp -TEEEEEETTEEEEEEEGGGG-TCCTTCCCCCE-EEECSTTEEEEEET-------TEEEEEETTTTEECGGGCEEHHHHS
T ss_pred -CEEEEEcCCccCCCEEeeec-ccCCCccceeE-EEEcCCCeEEEEeC-------CEEEEEeCCcccccCCCccChhhcC
Confidence 4688888653211 111111 34432 2222 22245679999977 358999987754221 11 00
Q ss_pred CCCCCCCcceeEEEeCCEEEEEccc
Q 010770 172 GSVPPPRCGHTATMVEKRLLIYGGR 196 (501)
Q Consensus 172 ~~~p~~r~~~~~~~~~~~lyv~GG~ 196 (501)
..+|. . -.++...++.+|+|-|.
T Consensus 143 ~Gvp~-~-idaa~~~~g~~Yffkg~ 165 (195)
T 1itv_A 143 PGVPL-D-THDVFQFREKAYFCQDR 165 (195)
T ss_dssp TTSCS-S-CSEEEEETTEEEEEETT
T ss_pred CCCCC-C-CCEEEEeCCeEEEEeCC
Confidence 01221 2 23444457999999774
No 193
>1pex_A Collagenase-3, MMP-13; C-terminal hemopexin-like domain of matrix- metalloproteinase, metalloprotease; 2.70A {Homo sapiens} SCOP: b.66.1.1
Probab=86.11 E-value=18 Score=32.11 Aligned_cols=153 Identities=16% Similarity=0.283 Sum_probs=76.7
Q ss_pred EEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEE--Eec-CCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEE
Q 010770 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSE--LTS-FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~--~~~-~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 156 (501)
+++..++++|+|=| .-+|+++.....+.. +.. -..+|.. . -++... .++++|+|-| +.+|
T Consensus 28 Ai~~~~g~~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~wp~Lp~~-i-DAa~~~~~~~~iyfFkG-------~~~w 91 (207)
T 1pex_A 28 AITSLRGETMIFKD-------RFFWRLHPQQVDAELFLTKSFWPELPNR-I-DAAYEHPSHDLIFIFRG-------RKFW 91 (207)
T ss_dssp EEEEETTEEEEEET-------TEEEEECSSSSCCEEEEHHHHCTTSCSS-C-CEEEEETTTTEEEEEET-------TEEE
T ss_pred EEEeCCCcEEEEEC-------CEEEEEeCCCcCCCceehhHhccCCCCC-c-cEEEEeccCCcEEEEcc-------CEEE
Confidence 45557899999965 247777654433322 211 1234532 2 223333 2579999977 3477
Q ss_pred EEECCCCce---EEcccCCCCCCC--CcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceE-----Ee
Q 010770 157 VLDTISLEW---MQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT-----QL 225 (501)
Q Consensus 157 ~yd~~t~~W---~~~~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~-----~~ 225 (501)
+|+-.+..- ..|...| +|.. ...+++... ++++|+|-|. ..++||..+++-. .+
T Consensus 92 ~~~~~~~~~gyPk~I~~~G-lP~~~~~IDAA~~~~~~gk~yfFkG~--------------~ywr~d~~~~~~d~gyPr~i 156 (207)
T 1pex_A 92 ALNGYDILEGYPKKISELG-LPKEVKKISAAVHFEDTGKTLLFSGN--------------QVWRYDDTNHIMDKDYPRLI 156 (207)
T ss_dssp EESTTCCCTTCSEESTTTT-CCTTCCCCCEEEECTTTSEEEEEETT--------------EEEEEETTTTEECSSCCCBH
T ss_pred EEeCCeeccCCceeccccC-CCCCCccccEEEEeCCCCEEEEEeCC--------------EEEEEeCcCccccCCCCccH
Confidence 776332111 1222111 2221 222333222 4799999773 2334455443211 01
Q ss_pred e--cCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 226 K--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 226 ~--~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
. .+| +| .... ++...++++|+|-| +..|+||..+.+-..
T Consensus 157 ~~~~~G-ip-~~iD-aAf~~~g~~YfFkg--------------~~y~rf~~~~~~v~~ 197 (207)
T 1pex_A 157 EEDFPG-IG-DKVD-AVYEKNGYIYFFNG--------------PIQFEYSIWSNRIVR 197 (207)
T ss_dssp HHHSTT-SC-SCCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred HHcCCC-CC-CCcc-EEEEcCCcEEEEEC--------------CEEEEEeCCccEEec
Confidence 0 011 22 2233 33346889999977 457999987765443
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=86.10 E-value=22 Score=33.23 Aligned_cols=58 Identities=19% Similarity=0.337 Sum_probs=37.8
Q ss_pred CcEEEEECCCCeE-EEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCc---c-cccEEEEECCCCceEEcc
Q 010770 102 GDFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKK---W-LSDVYVLDTISLEWMQLP 169 (501)
Q Consensus 102 ~~~~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~---~-~~~~~~yd~~t~~W~~~~ 169 (501)
..++++|+.+++. ..+.. + .....+...++ +++.+..+... . ...++.+| +.++..+.
T Consensus 152 ~~l~~~d~~~~~~~~~l~~----~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~ 214 (347)
T 2gop_A 152 TTFWIFDTESEEVIEEFEK----P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMF 214 (347)
T ss_dssp EEEEEEETTTTEEEEEEEE----E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEE
T ss_pred ceEEEEECCCCeEEeeecC----C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEec
Confidence 5689999999887 66652 1 33445556777 66666544321 2 45788898 77777765
No 195
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=85.31 E-value=24 Score=32.86 Aligned_cols=67 Identities=9% Similarity=0.152 Sum_probs=36.3
Q ss_pred EEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcC---cEEEEEecCCCCcccccEEEEECCCCc
Q 010770 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGN---RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 88 ~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~---~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
.+++.|+... .-..+.+||..+++...... ......-.+++...+ +.+++.|+.++ .+.+||..+.+
T Consensus 32 ~l~~~~s~~~--~d~~v~iw~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~l~~~~~dg-----~i~iwd~~~~~ 101 (357)
T 3i2n_A 32 KFVTMGNFAR--GTGVIQLYEIQHGDLKLLRE---IEKAKPIKCGTFGATSLQQRYLATGDFGG-----NLHIWNLEAPE 101 (357)
T ss_dssp EEEEEEC--C--CCEEEEEEEECSSSEEEEEE---EEESSCEEEEECTTCCTTTCCEEEEETTS-----CEEEECTTSCS
T ss_pred eEEEecCccC--CCcEEEEEeCCCCcccceee---ecccCcEEEEEEcCCCCCCceEEEecCCC-----eEEEEeCCCCC
Confidence 5666665421 12358888988887655432 111111222333333 47777777653 37888887665
No 196
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=85.28 E-value=8.9 Score=39.52 Aligned_cols=98 Identities=16% Similarity=0.078 Sum_probs=57.7
Q ss_pred eEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcC
Q 010770 48 VVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPR 127 (501)
Q Consensus 48 v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r 127 (501)
+.+||+.+++...+... +. ...+..-+++..++++..... ...++++|+.++++..+.. .+ .
T Consensus 134 ~~l~d~~~g~~~~l~~~---------~~---~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~~~l~~---~~--~ 195 (582)
T 3o4h_A 134 VALYALDGGGLRELARL---------PG---FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGLRVFDS---GE--G 195 (582)
T ss_dssp EEEEEEETTEEEEEEEE---------SS---CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCCEEECC---SS--C
T ss_pred ceEEEccCCcEEEeecC---------CC---ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCceEeec---CC--C
Confidence 44779888887776532 11 233344455555555543221 2359999999999887753 11 1
Q ss_pred CccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 128 DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
.....+...|++.++.+..++ ...++++|+.+.+..
T Consensus 196 ~~~~~~~SpDG~~l~~~~~~~---~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 196 SFSSASISPGMKVTAGLETAR---EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEEEEECTTSCEEEEEECSS---CEEEEEECTTTCCEE
T ss_pred ccccceECCCCCEEEEccCCC---eeEEEEEcCCCCcEE
Confidence 123344445665554443322 246999999998887
No 197
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=85.07 E-value=24 Score=32.67 Aligned_cols=101 Identities=14% Similarity=0.175 Sum_probs=51.0
Q ss_pred CcEEEEEcccCCCccCCceEEEEcC-CCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDID-NKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~-t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~y 107 (501)
++.||+... ...+++||+. ...|.... +.+. ..+.+.. ++.||+.. . ...+++|
T Consensus 107 ~~~l~v~t~------~~~l~~~d~~g~~~~~~~~-----------~~~~-~~~~~~~~~g~l~vgt-~-----~~~l~~~ 162 (330)
T 3hxj_A 107 EDILYVTSM------DGHLYAINTDGTEKWRFKT-----------KKAI-YATPIVSEDGTIYVGS-N-----DNYLYAI 162 (330)
T ss_dssp TTEEEEECT------TSEEEEECTTSCEEEEEEC-----------SSCC-CSCCEECTTSCEEEEC-T-----TSEEEEE
T ss_pred CCEEEEEec------CCEEEEEcCCCCEEEEEcC-----------CCce-eeeeEEcCCCEEEEEc-C-----CCEEEEE
Confidence 467776432 1348888887 33555432 1111 1222334 56777642 1 2468889
Q ss_pred ECCCC-eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC-CceEEc
Q 010770 108 DTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS-LEWMQL 168 (501)
Q Consensus 108 d~~t~-~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t-~~W~~~ 168 (501)
|+... .|.... +.. ...+.+...++.||+.. ..+++||... ..|+..
T Consensus 163 d~~g~~~~~~~~-----~~~-~~~~~~~d~~g~l~v~t--------~~l~~~d~~g~~~~~~~ 211 (330)
T 3hxj_A 163 NPDGTEKWRFKT-----NDA-ITSAASIGKDGTIYFGS--------DKVYAINPDGTEKWNFY 211 (330)
T ss_dssp CTTSCEEEEEEC-----SSC-CCSCCEECTTCCEEEES--------SSEEEECTTSCEEEEEC
T ss_pred CCCCCEeEEEec-----CCC-ceeeeEEcCCCEEEEEe--------CEEEEECCCCcEEEEEc
Confidence 98722 254432 111 12233333466777653 4588999432 346543
No 198
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=84.93 E-value=25 Score=32.73 Aligned_cols=116 Identities=8% Similarity=0.021 Sum_probs=66.3
Q ss_pred CcCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCC
Q 010770 20 RSGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGS 98 (501)
Q Consensus 20 R~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~ 98 (501)
...+..++..++.||+.--. ...+++||+... ....... + ..-+.++.. ++++|+......
T Consensus 32 ~~pegia~~~~g~lyv~d~~-----~~~I~~~d~~g~-~~~~~~~---------~--~~p~gia~~~dG~l~vad~~~~- 93 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE-----VGEIVSITPDGN-QQIHATV---------E--GKVSGLAFTSNGDLVATGWNAD- 93 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT-----TTEEEEECTTCC-EEEEEEC---------S--SEEEEEEECTTSCEEEEEECTT-
T ss_pred CCcceEEECCCCCEEEEeCC-----CCeEEEECCCCc-eEEEEeC---------C--CCceeEEEcCCCcEEEEeccCC-
Confidence 34445555455678877421 245899998764 3322211 1 122334443 567888753211
Q ss_pred CCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 99 RRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 99 ~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
...++.||+.+.+...+.. .+..+.....+...++.+|+... ....+|++|+.+.
T Consensus 94 --~~~v~~~d~~~g~~~~~~~---~~~~~~~~g~~~~~~~~~~v~d~-----~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 94 --SIPVVSLVKSDGTVETLLT---LPDAIFLNGITPLSDTQYLTADS-----YRGAIWLIDVVQP 148 (306)
T ss_dssp --SCEEEEEECTTSCEEEEEE---CTTCSCEEEEEESSSSEEEEEET-----TTTEEEEEETTTT
T ss_pred --cceEEEEcCCCCeEEEEEe---CCCccccCcccccCCCcEEEEEC-----CCCeEEEEeCCCC
Confidence 1248889998888877654 34445544555555557777642 1346999998764
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=84.87 E-value=31 Score=33.84 Aligned_cols=208 Identities=7% Similarity=-0.025 Sum_probs=107.1
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRL 101 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~ 101 (501)
.+++..++.||+.... ...+.++|+.++.-..+.... . ..+ .+.. ++.||+......
T Consensus 135 ~la~d~~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~~--------~---~~~-ia~~~~g~~l~~~d~~~~---- 193 (409)
T 3hrp_A 135 GIAAVGNNTVLAYQRD-----DPRVRLISVDDNKVTTVHPGF--------K---GGK-PAVTKDKQRVYSIGWEGT---- 193 (409)
T ss_dssp EEEECSTTEEEEEETT-----TTEEEEEETTTTEEEEEEETC--------C---BCB-CEECTTSSEEEEEBSSTT----
T ss_pred EEEEeCCCCEEEEecC-----CCcEEEEECCCCEEEEeeccC--------C---CCc-eeEecCCCcEEEEecCCC----
Confidence 4444466788888652 246899999988776654321 1 122 2222 345666643211
Q ss_pred CcEEEEECCCCe-EEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCc
Q 010770 102 GDFWVLDTDIWQ-WSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRC 179 (501)
Q Consensus 102 ~~~~~yd~~t~~-W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~ 179 (501)
..+++++..+.. ...+.... .+....-+++++.. ++.||+... ...+++||+.+.....+...+.......
T Consensus 194 ~~I~~~d~~~~~~~~~~g~~~-~~~~~~p~~iav~p~~g~lyv~d~------~~~I~~~d~~~~~~~~~~~~~~~g~~~~ 266 (409)
T 3hrp_A 194 HTVYVYMKASGWAPTRIGQLG-STFSGKIGAVALDETEEWLYFVDS------NKNFGRFNVKTQEVTLIKQLELSGSLGT 266 (409)
T ss_dssp CEEEEEEGGGTTCEEEEEECC-TTSCSCCCBCEECTTSSEEEEECT------TCEEEEEETTTCCEEEEEECCCCSCCCC
T ss_pred ceEEEEEcCCCceeEEeeecc-chhcCCcEEEEEeCCCCeEEEEEC------CCcEEEEECCCCCEEEEecccccCCCCC
Confidence 168999987543 22331100 10122234445544 679999422 2369999999887655521111111122
Q ss_pred c-e-eEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCC--------C--ceeeEEEE-eC
Q 010770 180 G-H-TATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPS--------S--RCGHTITS-GG 244 (501)
Q Consensus 180 ~-~-~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~--------~--r~~~s~~~-~~ 244 (501)
. . .+++. ++.||+..... +.+.+||++.. ...+...+..+. + ..-.++++ .+
T Consensus 267 ~P~~~ia~~p~~g~lyv~d~~~------------~~I~~~~~~g~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~d 333 (409)
T 3hrp_A 267 NPGPYLIYYFVDSNFYMSDQNL------------SSVYKITPDGE-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDED 333 (409)
T ss_dssp SSCCEEEEETTTTEEEEEETTT------------TEEEEECTTCC-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTT
T ss_pred CccccEEEeCCCCEEEEEeCCC------------CEEEEEecCCC-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCC
Confidence 2 1 44444 57899874321 34566676654 333321110000 0 11223444 34
Q ss_pred CEEEEEcC-CCCCCCCcccccccCeEEEEEcCCCceEEccc
Q 010770 245 HYLLLFGG-HGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 245 ~~i~v~GG-~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
+.||+... .+ +.|.++|+.+.....+..
T Consensus 334 G~lyvad~~~~------------~~I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 334 GNFYIVDGFKG------------YCLRKLDILDGYVSTVAG 362 (409)
T ss_dssp CCEEEEETTTT------------CEEEEEETTTTEEEEEEE
T ss_pred CCEEEEeCCCC------------CEEEEEECCCCEEEEEeC
Confidence 56888753 22 568999976776665543
No 200
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=84.68 E-value=18 Score=37.24 Aligned_cols=110 Identities=11% Similarity=-0.031 Sum_probs=60.0
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++..+..+ .+.+||+.+++-.++.. .+. .+.+...||+.+++++.+... ...++++|+.+.++
T Consensus 121 g~~~~~~s~~~~-----~~~l~d~~~g~~~~l~~---~~~----~~~~~spDG~~la~~~~~~~~-~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 121 GEAVVFTGATED-----RVALYALDGGGLRELAR---LPG----FGFVSDIRGDLIAGLGFFGGG-RVSLFTSNLSSGGL 187 (582)
T ss_dssp SSCEEEEEECSS-----CEEEEEEETTEEEEEEE---ESS----CEEEEEEETTEEEEEEEEETT-EEEEEEEETTTCCC
T ss_pred CCeEEEEecCCC-----CceEEEccCCcEEEeec---CCC----ceEEECCCCCEEEEEEEcCCC-CeEEEEEcCCCCCc
Confidence 445555544322 34477998888777764 222 344444455666655543222 24599999999998
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceE
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT 223 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~ 223 (501)
+.+. ..+.. ....+.. +++.++.+...+ ...++.+|+.+++..
T Consensus 188 ~~l~---~~~~~--~~~~~~SpDG~~l~~~~~~~----------~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 188 RVFD---SGEGS--FSSASISPGMKVTAGLETAR----------EARLVTVDPRDGSVE 231 (582)
T ss_dssp EEEC---CSSCE--EEEEEECTTSCEEEEEECSS----------CEEEEEECTTTCCEE
T ss_pred eEee---cCCCc--cccceECCCCCEEEEccCCC----------eeEEEEEcCCCCcEE
Confidence 8775 21111 1222222 454433333211 135667799888877
No 201
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=84.03 E-value=26 Score=32.24 Aligned_cols=65 Identities=11% Similarity=0.208 Sum_probs=39.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCe--EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
.+++++.|..+ +.+.++|.++++ |+.-. +.....|.+....++.+++.+ .+.++.||+ +.
T Consensus 4 ~~~~lv~~~~~-----~~v~~~d~~tG~~~w~~~~-----~~~~~~~~~~~~pdG~ilvs~-------~~~V~~~d~-~G 65 (276)
T 3no2_A 4 PQHLLVGGSGW-----NKIAIINKDTKEIVWEYPL-----EKGWECNSVAATKAGEILFSY-------SKGAKMITR-DG 65 (276)
T ss_dssp CCEEEEECTTC-----SEEEEEETTTTEEEEEEEC-----CTTCCCCEEEECTTSCEEEEC-------BSEEEEECT-TS
T ss_pred CCcEEEeeCCC-----CEEEEEECCCCeEEEEeCC-----CccCCCcCeEECCCCCEEEeC-------CCCEEEECC-CC
Confidence 35677776532 468889987775 55432 111234666677778888832 245889998 44
Q ss_pred c--eEEc
Q 010770 164 E--WMQL 168 (501)
Q Consensus 164 ~--W~~~ 168 (501)
+ |+.-
T Consensus 66 ~~~W~~~ 72 (276)
T 3no2_A 66 RELWNIA 72 (276)
T ss_dssp CEEEEEE
T ss_pred CEEEEEc
Confidence 3 6643
No 202
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=83.61 E-value=28 Score=32.25 Aligned_cols=69 Identities=16% Similarity=0.173 Sum_probs=40.2
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCe----EEEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEEC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ----WSELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLDT 160 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~----W~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~ 160 (501)
++.+++.|+.+ ..+.+||..+.. ...+.. ....-.+++...++. .++.|+.++ .+.+||+
T Consensus 22 ~~~~l~~~~~d-----~~v~iw~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~l~~~~~dg-----~i~~wd~ 86 (342)
T 1yfq_A 22 SKSLLLITSWD-----GSLTVYKFDIQAKNVDLLQSLR-----YKHPLLCCNFIDNTDLQIYVGTVQG-----EILKVDL 86 (342)
T ss_dssp GGTEEEEEETT-----SEEEEEEEETTTTEEEEEEEEE-----CSSCEEEEEEEESSSEEEEEEETTS-----CEEEECS
T ss_pred CCCEEEEEcCC-----CeEEEEEeCCCCccccceeeee-----cCCceEEEEECCCCCcEEEEEcCCC-----eEEEEEe
Confidence 45566666543 357777776655 333221 122233444444567 777777543 4889999
Q ss_pred -CCCceEEcc
Q 010770 161 -ISLEWMQLP 169 (501)
Q Consensus 161 -~t~~W~~~~ 169 (501)
.+.+...+.
T Consensus 87 ~~~~~~~~~~ 96 (342)
T 1yfq_A 87 IGSPSFQALT 96 (342)
T ss_dssp SSSSSEEECB
T ss_pred ccCCceEecc
Confidence 888776554
No 203
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=83.28 E-value=35 Score=33.10 Aligned_cols=215 Identities=14% Similarity=0.096 Sum_probs=109.8
Q ss_pred eEEEEcCC--CcEEeceecCCCCCCCCCCCCcceeEEEEe---CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCC
Q 010770 48 VVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGD 122 (501)
Q Consensus 48 v~~yd~~t--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~ 122 (501)
+++++... .+|..+... +....-++++.. .+.||+.+.. +. .-.-+++.+-...+|+++.....
T Consensus 33 l~~~~~~~~g~~W~~~~~~---------~~~~~v~~i~~dp~~~~~l~~g~~~-g~-~g~gl~~s~D~G~tW~~~~~~~~ 101 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGPV---------FLGHTIHHIVQDPREPERMLMAART-GH-LGPTVFRSDDGGGNWTEATRPPA 101 (394)
T ss_dssp EEEEEECTTSCSEEEEEEE---------STTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCC
T ss_pred eEEEECCCCCCCceECCcc---------CCCCceEEEEECCCCCCeEEEEecC-CC-CCccEEEeCCCCCCceECCcccc
Confidence 77787765 689886421 112233445444 4578876532 10 01146666666778998864211
Q ss_pred CCCc--C----C-ccE-EEEEc----CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCC--------------
Q 010770 123 LPSP--R----D-FAA-ASAIG----NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPP-------------- 176 (501)
Q Consensus 123 ~p~~--r----~-~~~-~~~~~----~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~-------------- 176 (501)
.+.. + . .+. ++.+. .+.||+.+. ...+++.+-...+|+.+......|.
T Consensus 102 ~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~------~ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~~ 175 (394)
T 3b7f_A 102 FNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTS------PQGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTPD 175 (394)
T ss_dssp CCCCC----CCCCCEEEEEEECCTTSTTCEEEEEE------TTEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----CC
T ss_pred CCCcccccccccccceeEEEeCCCCCCCEEEEEec------CCcEEEEcCCCCCeEECcCccCCccccccccccccCCCC
Confidence 2211 1 0 111 12232 457777542 2358888878889998752101111
Q ss_pred CCcceeEEEe---CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCC---CCCCC-----ceeeEEEEe--
Q 010770 177 PRCGHTATMV---EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPG---QAPSS-----RCGHTITSG-- 243 (501)
Q Consensus 177 ~r~~~~~~~~---~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g---~~p~~-----r~~~s~~~~-- 243 (501)
...-++++.. .+.||+.... ..+++.+....+|+.+.... .+|.+ ...++++..
T Consensus 176 ~~~i~~i~~d~~~~~~l~vg~~~-------------ggl~~s~DgG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~ 242 (394)
T 3b7f_A 176 GPKMHSILVDPRDPKHLYIGMSS-------------GGVFESTDAGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPA 242 (394)
T ss_dssp CCEEEEEEECTTCTTCEEEEEET-------------BEEEEESSTTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSS
T ss_pred CCceeEEEECCCCCCEEEEEECC-------------CCEEEECCCCCCceECCCCccccccCCCccccCcceeEEEECCC
Confidence 1112334333 2567775432 12334466778999875211 11211 223444443
Q ss_pred -CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCC--cccceEEEEE---CCEEEEEc
Q 010770 244 -GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPP--ARAYHSMTCL---GSLYLLFG 308 (501)
Q Consensus 244 -~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~--~r~~~~~~~~---~~~iyv~G 308 (501)
.+.||+-.+ ..+++.+-...+|+.+... .|. ..+..+++.. .+.||+..
T Consensus 243 ~~~~l~vg~~--------------~gl~~s~D~G~tW~~~~~~--l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 243 APDILYQQNH--------------CGIYRMDRREGVWKRIGDA--MPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp STTEEEEEET--------------TEEEEEETTTTEEECGGGG--SCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCCEEEEEcC--------------CeEEEeCCCCCcceECCCC--CCCCCccceEEEEECCCCCCEEEEEe
Confidence 256666321 3488888889999998642 121 1333444442 46677763
No 204
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=82.99 E-value=35 Score=33.32 Aligned_cols=27 Identities=15% Similarity=0.040 Sum_probs=16.5
Q ss_pred EEEEEcCcE-EEEEecCCCCcccccEEEEECCC
Q 010770 131 AASAIGNRK-IVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 131 ~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+++...++. +++.|+.++ .+.+||+.+
T Consensus 186 ~l~~~~~~~~~l~s~~~dg-----~i~vwd~~~ 213 (430)
T 2xyi_A 186 GLSWNPNLNGYLLSASDDH-----TICLWDINA 213 (430)
T ss_dssp CEEECTTSTTEEEEECTTS-----CEEEEETTS
T ss_pred EEEeCCCCCCeEEEEeCCC-----eEEEEeCCC
Confidence 344444444 777777544 378888876
No 205
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=82.92 E-value=51 Score=34.81 Aligned_cols=170 Identities=14% Similarity=0.088 Sum_probs=84.3
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCC-------CcccccEEEE
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDG-------KKWLSDVYVL 158 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~-------~~~~~~~~~y 158 (501)
+++..+++-..++....+++++|+.+++..... .+..+. .+.+..++..||+...... ......++++
T Consensus 139 Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~----~~~~k~-~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~~v~~~ 213 (693)
T 3iuj_A 139 DGRILAYSLSLAGSDWREIHLMDVESKQPLETP----LKDVKF-SGISWLGNEGFFYSSYDKPDGSELSARTDQHKVYFH 213 (693)
T ss_dssp TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE----EEEEES-CCCEEETTTEEEEEESSCCC-------CCCCEEEEE
T ss_pred CCCEEEEEEecCCCceEEEEEEECCCCCCCccc----cCCcee-ccEEEeCCCEEEEEEecCcccccccccCCCcEEEEE
Confidence 566555543322233457999999999876653 222222 2223333334544432211 1334568888
Q ss_pred ECCCCce--EEcccCCCCCC--CCcceeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCC--ceEEeecCCC
Q 010770 159 DTISLEW--MQLPVTGSVPP--PRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GWTQLKLPGQ 230 (501)
Q Consensus 159 d~~t~~W--~~~~~~~~~p~--~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~--~W~~~~~~g~ 230 (501)
++.+..= ..+. ..+. +.....+... ++ .|++....... . +.++.+|..+. .|..+..
T Consensus 214 ~lgt~~~~~~~v~---~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~---~------~~i~~~d~~~~~~~~~~l~~--- 278 (693)
T 3iuj_A 214 RLGTAQEDDRLVF---GAIPAQHHRYVGATVTEDDRFLLISAANSTS---G------NRLYVKDLSQENAPLLTVQG--- 278 (693)
T ss_dssp ETTSCGGGCEEEE---SCSGGGCCSEEEEEECTTSCEEEEEEESSSS---C------CEEEEEETTSTTCCCEEEEC---
T ss_pred ECCCCcccceEEE---ecCCCCCeEEEEEEEcCCCCEEEEEEccCCC---C------cEEEEEECCCCCCceEEEeC---
Confidence 8877653 1221 1111 1212222222 44 44443332211 1 23444576655 6887762
Q ss_pred CCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCC---ceEEcccC
Q 010770 231 APSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA---QWKRLPIG 285 (501)
Q Consensus 231 ~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~---~W~~v~~~ 285 (501)
.... ........++.+|+....+. ....++.+|+.+. .|+.+...
T Consensus 279 ~~~~-~~~~~~~~g~~l~~~t~~~~---------~~~~l~~~d~~~~~~~~~~~l~~~ 326 (693)
T 3iuj_A 279 DLDA-DVSLVDNKGSTLYLLTNRDA---------PNRRLVTVDAANPGPAHWRDLIPE 326 (693)
T ss_dssp SSSS-CEEEEEEETTEEEEEECTTC---------TTCEEEEEETTSCCGGGCEEEECC
T ss_pred CCCc-eEEEEeccCCEEEEEECCCC---------CCCEEEEEeCCCCCccccEEEecC
Confidence 1111 11123346788998876432 2357999998763 48876553
No 206
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=82.86 E-value=52 Score=34.87 Aligned_cols=126 Identities=16% Similarity=0.065 Sum_probs=66.2
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
.++.||+.... ..++.+|..++ .|+.-...... ......+.....+.++.++.||+... ...++.
T Consensus 69 ~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~v~v~~~------dg~l~A 135 (689)
T 1yiq_A 69 VDGVMYTTGPF------SVVYALDARDGRLIWKYDPQSDRH-RAGEACCDAVNRGVAVWKGKVYVGVL------DGRLEA 135 (689)
T ss_dssp ETTEEEEECGG------GCEEEEETTTCCEEEEECCCCCGG-GGGGCTTCSCCCCCEEETTEEEEECT------TSEEEE
T ss_pred ECCEEEEEcCC------CeEEEEECCCCceeEEEcCCCCcc-ccccccccCCCCccEEECCEEEEEcc------CCEEEE
Confidence 34789987652 45999998876 68763211000 00000000111223556888887642 246899
Q ss_pred EECCCCe--EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc--eEEc
Q 010770 107 LDTDIWQ--WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQL 168 (501)
Q Consensus 107 yd~~t~~--W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~ 168 (501)
+|..|++ |+.-.............+.++. ++.+|+-.+.........++.||..|.+ |+.-
T Consensus 136 lDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 136 IDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp EETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred EECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEEEEEeCCCccCCCCEEEEEECCCCcEEEEec
Confidence 9998875 7765320000011112223334 5588774332111234569999999877 8764
No 207
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=82.27 E-value=33 Score=32.16 Aligned_cols=162 Identities=9% Similarity=-0.037 Sum_probs=84.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC----CCcCC-ccEEEEEcC-cEEEEEecCCCCcccccEEEEE
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL----PSPRD-FAAASAIGN-RKIVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~----p~~r~-~~~~~~~~~-~~iyv~GG~~~~~~~~~~~~yd 159 (501)
++.||+..++ ..+.+.+||.....-..+...+.. +.... -+++++..+ +.||+.... .+.+.+||
T Consensus 154 ~g~lyv~d~~----~~~~I~~~~~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~-----~~~I~~~~ 224 (329)
T 3fvz_A 154 TGAVFVSDGY----CNSRIVQFSPSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE-----NGRIQCFK 224 (329)
T ss_dssp TCCEEEEECS----SCCEEEEECTTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT-----TTEEEEEE
T ss_pred CCeEEEEeCC----CCCeEEEEcCCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC-----CCEEEEEE
Confidence 5789998752 124688999665544444321111 11111 234444444 799998653 34689999
Q ss_pred CCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeE
Q 010770 160 TISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHT 239 (501)
Q Consensus 160 ~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s 239 (501)
+.+.+....-.. ......-.+++...+.+|+..|...-... .-..+..+|+.+.+....-..+. .....-++
T Consensus 225 ~~~G~~~~~~~~--~~~~~~~~~~~~~pg~~~~~~g~~~v~~~-----~~~~v~~~~~~~g~~~~~~~~~~-~~~~~p~~ 296 (329)
T 3fvz_A 225 TDTKEFVREIKH--ASFGRNVFAISYIPGFLFAVNGKPYFGDQ-----EPVQGFVMNFSSGEIIDVFKPVR-KHFDMPHD 296 (329)
T ss_dssp TTTCCEEEEECC--TTTTTCEEEEEEETTEEEEEECCCCTTCS-----CCCCEEEEETTTCCEEEEECCSS-SCCSSEEE
T ss_pred CCCCcEEEEEec--cccCCCcceeeecCCEEEEeCCCEEeccC-----CCcEEEEEEcCCCeEEEEEcCCC-CccCCeeE
Confidence 987766543211 11111122344445777777664321100 11345667877776654421111 11122234
Q ss_pred EEE-eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCC
Q 010770 240 ITS-GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS 276 (501)
Q Consensus 240 ~~~-~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~ 276 (501)
+++ -++.+|+....+ +.|++|++..
T Consensus 297 ia~~~dG~lyvad~~~------------~~I~~~~~~~ 322 (329)
T 3fvz_A 297 IVASEDGTVYIGDAHT------------NTVWKFTLTE 322 (329)
T ss_dssp EEECTTSEEEEEESSS------------CCEEEEEEEE
T ss_pred EEECCCCCEEEEECCC------------CEEEEEeCCc
Confidence 444 355888876432 5688888653
No 208
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=82.13 E-value=34 Score=32.23 Aligned_cols=67 Identities=7% Similarity=0.008 Sum_probs=31.4
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 111 (501)
.||+.+...+....-.+|.++..+++...+..... ......+.+ ..++.||+.+.. ...+.+|++.+
T Consensus 63 ~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~-------~~~~p~~~~-~dg~~l~~~~~~-----~~~v~~~~~~~ 129 (361)
T 3scy_A 63 FVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKT-------MGADPCYLT-TNGKNIVTANYS-----GGSITVFPIGQ 129 (361)
T ss_dssp EEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEEC-------SSSCEEEEE-ECSSEEEEEETT-----TTEEEEEEBCT
T ss_pred EEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEecc-------CCCCcEEEE-ECCCEEEEEECC-----CCEEEEEEeCC
Confidence 46665543211111234556666677777654311 111222222 234456665431 24577888764
No 209
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=81.90 E-value=31 Score=31.63 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=17.5
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEece
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPE 62 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~ 62 (501)
+.+++.|+.+ ..+.++|+.++.|..+.
T Consensus 67 g~~l~s~s~D-----~~v~iWd~~~~~~~~~~ 93 (297)
T 2pm7_B 67 GTILASCSYD-----GKVMIWKEENGRWSQIA 93 (297)
T ss_dssp CSEEEEEETT-----TEEEEEEBSSSCBCCCE
T ss_pred CCEEEEEcCC-----CEEEEEEcCCCceEEEE
Confidence 4566666643 34778888887776554
No 210
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=81.56 E-value=31 Score=31.31 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=21.7
Q ss_pred CeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCCC
Q 010770 267 NDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDGK 313 (501)
Q Consensus 267 ~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~ 313 (501)
..+.+||+.+......-.... .. ..+++.. +++ ++.|+.++.
T Consensus 246 g~v~iwd~~~~~~~~~~~~~~---~~-i~~~~~~~~~~-~~~~~~dg~ 288 (313)
T 3odt_A 246 RTVRIWSKENGSLKQVITLPA---IS-IWSVDCMSNGD-IIVGSSDNL 288 (313)
T ss_dssp SEEEEECTTTCCEEEEEECSS---SC-EEEEEECTTSC-EEEEETTSC
T ss_pred CEEEEEECCCCceeEEEeccC---ce-EEEEEEccCCC-EEEEeCCCc
Confidence 468999988876544332211 11 2233333 445 556776553
No 211
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=80.48 E-value=13 Score=34.73 Aligned_cols=69 Identities=12% Similarity=0.061 Sum_probs=42.5
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++.+|+.++.+ +.++++|+.+++....-. .+.....+.++...++ .+|+.+.. ...+++||+.+.+
T Consensus 10 ~~~~~v~~~~~-----~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~s~dg~~~~v~~~~-----~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 10 GHEYMIVTNYP-----NNLHVVDVASDTVYKSCV---MPDKFGPGTAMMAPDNRTAYVLNNH-----YGDIYGIDLDTCK 76 (349)
T ss_dssp TCEEEEEEETT-----TEEEEEETTTTEEEEEEE---CSSCCSSCEEEECTTSSEEEEEETT-----TTEEEEEETTTTE
T ss_pred CCEEEEEeCCC-----CeEEEEECCCCcEEEEEe---cCCCCCCceeEECCCCCEEEEEeCC-----CCcEEEEeCCCCc
Confidence 56778777542 468999999887654432 2221123344444454 57777642 2459999999887
Q ss_pred eEE
Q 010770 165 WMQ 167 (501)
Q Consensus 165 W~~ 167 (501)
-..
T Consensus 77 ~~~ 79 (349)
T 1jmx_B 77 NTF 79 (349)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 212
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=80.32 E-value=37 Score=31.51 Aligned_cols=63 Identities=10% Similarity=-0.012 Sum_probs=35.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE---eCCEEEEEccccCCCCCCcEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA---IDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~---~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
++..++.|+.+ ..+.+||..+.....+... .. .-.+++. -++.+++.|+.+ ..+.+
T Consensus 97 ~~~~l~s~~~d-----g~v~iwd~~~~~~~~~~~~----------~~-~v~~~~~~~~~~~~~l~~~~~d-----g~i~v 155 (368)
T 3mmy_A 97 DGSKVFTASCD-----KTAKMWDLSSNQAIQIAQH----------DA-PVKTIHWIKAPNYSCVMTGSWD-----KTLKF 155 (368)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEEC----------SS-CEEEEEEEECSSCEEEEEEETT-----SEEEE
T ss_pred CCCEEEEEcCC-----CcEEEEEcCCCCceeeccc----------cC-ceEEEEEEeCCCCCEEEEccCC-----CcEEE
Confidence 34455555532 3588899988876554321 11 1122222 355777777654 35888
Q ss_pred EECCCCe
Q 010770 107 LDTDIWQ 113 (501)
Q Consensus 107 yd~~t~~ 113 (501)
||+.+.+
T Consensus 156 wd~~~~~ 162 (368)
T 3mmy_A 156 WDTRSSN 162 (368)
T ss_dssp ECSSCSS
T ss_pred EECCCCc
Confidence 8887665
No 213
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=78.92 E-value=4.2 Score=39.63 Aligned_cols=69 Identities=12% Similarity=0.124 Sum_probs=30.8
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCC
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (501)
++..++.++.||+.+. + ..++++|..++ .|+.-. .. ...+.++.++.+|+.|+.+
T Consensus 2 ~ssP~v~~~~v~~gs~-d-----g~v~a~d~~tG~~~W~~~~--~~-----------~~s~p~~~~g~~~v~~s~d---- 58 (369)
T 2hz6_A 2 SSTVTLPETLLFVSTL-D-----GSLHAVSKRTGSIKWTLKE--DP-----------VLQVPTHVEEPAFLPDPND---- 58 (369)
T ss_dssp ------CTTEEEEEET-T-----SEEEEEETTTCCEEEEEEC--CC-----------SCCCC-----CCEEECTTT----
T ss_pred CCCCeeeCCEEEEEcC-C-----CEEEEEECCCCCEEEEecC--CC-----------ceecceEcCCCEEEEeCCC----
Confidence 4445556577777543 1 35899998876 576532 10 1112233456678776432
Q ss_pred CCcEEEEECCCC--eEE
Q 010770 101 LGDFWVLDTDIW--QWS 115 (501)
Q Consensus 101 ~~~~~~yd~~t~--~W~ 115 (501)
..++++|..++ .|.
T Consensus 59 -g~l~a~d~~tG~~~w~ 74 (369)
T 2hz6_A 59 -GSLYTLGSKNNEGLTK 74 (369)
T ss_dssp -CCEEEC-----CCSEE
T ss_pred -CEEEEEECCCCceeee
Confidence 35889998655 354
No 214
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=78.76 E-value=47 Score=31.75 Aligned_cols=176 Identities=15% Similarity=0.048 Sum_probs=77.9
Q ss_pred cEEEEECCCCeEEEEecCCCCCCcCCc-cEEEEE--cCcEEEEEecCCCCcccccEEEEECCCCc--eEEcccCCCCCCC
Q 010770 103 DFWVLDTDIWQWSELTSFGDLPSPRDF-AAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSVPPP 177 (501)
Q Consensus 103 ~~~~yd~~t~~W~~~~~~~~~p~~r~~-~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~p~~ 177 (501)
.+.+||+.+++-...... ..+..... -..+.+ .++.+++.|+.++ .+.+||+.... -..+. + . ..
T Consensus 181 ~i~~wd~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~--~-h-~~ 250 (380)
T 3iz6_a 181 TCVLWDVTTGQRISIFGS-EFPSGHTADVLSLSINSLNANMFISGSCDT-----TVRLWDLRITSRAVRTYH--G-H-EG 250 (380)
T ss_dssp CEEEECTTTCCEEEEECC-CSSSSCCSCEEEEEECSSSCCEEEEEETTS-----CEEEEETTTTCCCCEEEC--C-C-SS
T ss_pred cEEEEEcCCCcEEEEeec-ccCCCCccCeEEEEeecCCCCEEEEEECCC-----eEEEEECCCCCcceEEEC--C-c-CC
Confidence 467777777654433210 11111111 111222 2457788887654 37788875321 11111 0 0 00
Q ss_pred CcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCC-C-CCCc-eeeEEEE-eCCEEEEEcC
Q 010770 178 RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQ-A-PSSR-CGHTITS-GGHYLLLFGG 252 (501)
Q Consensus 178 r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~-~-p~~r-~~~s~~~-~~~~i~v~GG 252 (501)
. -.+++.. ++..++.|+..+ .+..+|+.+..-...-.... . .... .-.+++. .++.+++.|+
T Consensus 251 ~-v~~v~~~p~~~~l~s~s~D~------------~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~ 317 (380)
T 3iz6_a 251 D-INSVKFFPDGQRFGTGSDDG------------TCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGY 317 (380)
T ss_dssp C-CCEEEECTTSSEEEEECSSS------------CEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEEC
T ss_pred C-eEEEEEecCCCeEEEEcCCC------------eEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEE
Confidence 0 1122222 556777776542 34456766654333221100 0 0000 1123333 4556666665
Q ss_pred CCCCCCCcccccccCeEEEEEcCCCceEE-cccCCCCCCcccceEEEEECCEEEEEccCCCC
Q 010770 253 HGTGGWLSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCLGSLYLLFGGFDGK 313 (501)
Q Consensus 253 ~~~~~~~~~~~~~~~~v~~yd~~~~~W~~-v~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~ 313 (501)
.+ ..+.+||..+..-.. +......-..+....+..-++..++.||.++.
T Consensus 318 ~d------------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~ 367 (380)
T 3iz6_a 318 SN------------GDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKN 367 (380)
T ss_dssp TT------------SCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSC
T ss_pred CC------------CCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCC
Confidence 43 358899987665432 22111111122222222335778888887764
No 215
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=78.64 E-value=88 Score=34.80 Aligned_cols=192 Identities=9% Similarity=0.087 Sum_probs=95.5
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
+.+++.+..++ ...+|.+++....-..+... . .....+..-+++.++++. ...++.+|..
T Consensus 214 d~l~~~~~~dg---~~~l~~~~~~g~~~~~l~~~---------~--~~~~~~~SpDG~~la~~~------~~~i~~~d~~ 273 (1045)
T 1k32_A 214 HRIYFITDIDG---FGQIYSTDLDGKDLRKHTSF---------T--DYYPRHLNTDGRRILFSK------GGSIYIFNPD 273 (1045)
T ss_dssp TEEEEEECTTS---SCEEEEEETTSCSCEECCCC---------C--SSCEEEEEESSSCEEEEE------TTEEEEECTT
T ss_pred CEEEEEEeccC---ceEEEEEeCCCCcceEecCC---------C--CcceeeEcCCCCEEEEEe------CCEEEEecCC
Confidence 46666654322 35688888877655554321 1 111223344555444442 2468888886
Q ss_pred CCeEEEEecCCCCCC--------cCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 111 IWQWSELTSFGDLPS--------PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 111 t~~W~~~~~~~~~p~--------~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
+.....+.. +.+. .....+++.. .+++.++++. ...++.++..+.....+. ..+..+..+
T Consensus 274 ~~~l~~l~~--~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~------~~~i~~~~~~~~~~~~~~---~~~~~~~~~ 342 (1045)
T 1k32_A 274 TEKIEKIEI--GDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS------RGQAFIQDVSGTYVLKVP---EPLRIRYVR 342 (1045)
T ss_dssp TCCEEECCC--CCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE------TTEEEEECTTSSBEEECS---CCSCEEEEE
T ss_pred ceEeeeecc--CcccccccccccccccceeeecCCCCCEEEEEE------cCEEEEEcCCCCceEEcc---CCCcceEEe
Confidence 655543321 1100 0123344455 5666555554 245888888877766553 211101111
Q ss_pred eEEEeCCEEEEEcccCCCCCcccccccccccc-cccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCCC
Q 010770 182 TATMVEKRLLIYGGRGGGGPIMGDLWALKGLI-EEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGWL 259 (501)
Q Consensus 182 ~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~-~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~~ 259 (501)
.... +++.+++++. . ..++ .||..+.....+. + ..... ..++. -+++.+++++..
T Consensus 343 ~~~s-dg~~l~~~s~---~---------~~l~~~~d~~~~~~~~l~--~--~~~~~-~~~~~SpDG~~la~~~~~----- 399 (1045)
T 1k32_A 343 RGGD-TKVAFIHGTR---E---------GDFLGIYDYRTGKAEKFE--E--NLGNV-FAMGVDRNGKFAVVANDR----- 399 (1045)
T ss_dssp ECSS-SEEEEEEEET---T---------EEEEEEEETTTCCEEECC--C--CCCSE-EEEEECTTSSEEEEEETT-----
T ss_pred eeEc-CCCeEEEEEC---C---------CceEEEEECCCCCceEec--C--Cccce-eeeEECCCCCEEEEECCC-----
Confidence 1112 4544444432 1 2344 5677777655554 1 11122 23333 345555555422
Q ss_pred cccccccCeEEEEEcCCCceEEcc
Q 010770 260 SRYDIYYNDTIILDRLSAQWKRLP 283 (501)
Q Consensus 260 ~~~~~~~~~v~~yd~~~~~W~~v~ 283 (501)
..++++|+.+..-..+.
T Consensus 400 -------~~v~~~d~~tg~~~~~~ 416 (1045)
T 1k32_A 400 -------FEIMTVDLETGKPTVIE 416 (1045)
T ss_dssp -------SEEEEEETTTCCEEEEE
T ss_pred -------CeEEEEECCCCceEEec
Confidence 47899999988776664
No 216
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=78.52 E-value=43 Score=31.23 Aligned_cols=105 Identities=7% Similarity=0.042 Sum_probs=49.4
Q ss_pred EEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEEECCC
Q 010770 33 VVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDI 111 (501)
Q Consensus 33 iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t 111 (501)
+++.||.+ ..+.+||+.++.+..+..... ......-.+++. -++.+++.|+.++ .+.++|...
T Consensus 26 ~las~~~D-----~~i~lw~~~~~~~~~~~~~~~------~~h~~~v~~v~~sp~~~~las~s~D~-----~v~iw~~~~ 89 (330)
T 2hes_X 26 ILATGSTD-----RKIKLVSVKYDDFTLIDVLDE------TAHKKAIRSVAWRPHTSLLAAGSFDS-----TVSIWAKEE 89 (330)
T ss_dssp EEEEEESS-----SCEEEEECSSSCCEEEEEECT------TCCCSCEEEEEECTTSSEEEEEETTS-----CEEEEEC--
T ss_pred EEEEEcCC-----CEEEEEEecCCCeEEEEEEec------CCccCCEEEEEECCCCCEEEEEeCCC-----cEEEEEccc
Confidence 66666643 347788888765544432210 001111122222 2556777777543 466777643
Q ss_pred C-----eEEEEecCCCCCC-cCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC
Q 010770 112 W-----QWSELTSFGDLPS-PRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 112 ~-----~W~~~~~~~~~p~-~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
. .+..+.. +.. ...-.+++...++..++.|+.++ .+.++|+.
T Consensus 90 ~~~~~~~~~~~~~---~~~h~~~V~~v~~sp~g~~las~s~D~-----~v~iwd~~ 137 (330)
T 2hes_X 90 SADRTFEMDLLAI---IEGHENEVKGVAWSNDGYYLATCSRDK-----SVWIWETD 137 (330)
T ss_dssp -----CCCEEEEE---EC----CEEEEEECTTSCEEEEEETTS-----CEEEEECC
T ss_pred CcCccccceeEEE---EcCCCCcEEEEEECCCCCEEEEEeCCC-----EEEEEecc
Confidence 2 1222221 111 11112233335667778887654 37788874
No 217
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=78.17 E-value=61 Score=32.70 Aligned_cols=173 Identities=8% Similarity=-0.027 Sum_probs=79.3
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.+ ..+.+||.....-..+.. . . ..-.+++...+++.++.|+.++ .+.+||.....-
T Consensus 355 ~g~~l~~~~~d-----g~v~~~~~~~~~~~~~~~---~-~-~~v~~~~~s~dg~~l~~~~~d~-----~v~~~~~~~~~~ 419 (577)
T 2ymu_A 355 DGQTIASASDD-----KTVKLWNRNGQLLQTLTG---H-S-SSVRGVAFSPDGQTIASASDDK-----TVKLWNRNGQLL 419 (577)
T ss_dssp TSSEEEEEETT-----SEEEEEETTCCEEEEEEC---C-S-SCEEEEEECTTSSCEEEEETTS-----EEEEECTTCCEE
T ss_pred CCCEEEEEeCC-----CEEEEEcCCCCEEEEecC---C-C-CCeEEEEECCCCCEEEEEeCCC-----EEEEEeCCCCEE
Confidence 55666666543 246778866554444431 1 1 1112333345667777777543 467777544333
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-e
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~ 243 (501)
..+. ....+ . .+++.. ++++++.++.. ..+..||.....-..+.. . .... .+++. -
T Consensus 420 ~~~~---~~~~~-v-~~~~~s~d~~~l~~~~~d------------~~v~~w~~~~~~~~~~~~---~-~~~v-~~~~~sp 477 (577)
T 2ymu_A 420 QTLT---GHSSS-V-WGVAFSPDDQTIASASDD------------KTVKLWNRNGQLLQTLTG---H-SSSV-RGVAFSP 477 (577)
T ss_dssp EEEE---CCSSC-E-EEEEECTTSSEEEEEETT------------SEEEEEETTSCEEEEEEC---C-SSCE-EEEEECT
T ss_pred EEec---CCCCC-e-EEEEECCCCCEEEEEcCC------------CEEEEEECCCCEEEEEcC---C-CCCE-EEEEEcC
Confidence 3332 11111 1 112222 55666666543 224455655444444431 1 1111 22333 3
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEE-ECCEEEEEccCCC
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTC-LGSLYLLFGGFDG 312 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~ 312 (501)
++++++.|+.+ ..+.+||.....-..+.... ... .+++. -++++++.||.++
T Consensus 478 d~~~las~~~d------------~~i~iw~~~~~~~~~~~~h~----~~v-~~l~~s~dg~~l~s~~~dg 530 (577)
T 2ymu_A 478 DGQTIASASDD------------KTVKLWNRNGQLLQTLTGHS----SSV-RGVAFSPDGQTIASASDDK 530 (577)
T ss_dssp TSCEEEEEETT------------SEEEEEETTSCEEEEEECCS----SCE-EEEEECTTSSCEEEEETTS
T ss_pred CCCEEEEEeCC------------CEEEEEcCCCCEEEEEeCCC----CCE-EEEEEcCCCCEEEEEECcC
Confidence 55666666543 34677786544333333211 111 22222 2566677777554
No 218
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=77.66 E-value=43 Score=30.75 Aligned_cols=105 Identities=7% Similarity=-0.112 Sum_probs=50.8
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCCcEEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
++..++.|+.+ ..+.+||..+++-...-. ... ..-.+++.. ++.+++.|+.++ .+.++|
T Consensus 66 ~~~~l~s~s~d-----~~i~vwd~~~~~~~~~~~---------~h~-~~v~~~~~~~~~~~l~sgs~D~-----~v~lWd 125 (304)
T 2ynn_A 66 RKNWIIVGSDD-----FRIRVFNYNTGEKVVDFE---------AHP-DYIRSIAVHPTKPYVLSGSDDL-----TVKLWN 125 (304)
T ss_dssp GGTEEEEEETT-----SEEEEEETTTCCEEEEEE---------CCS-SCEEEEEECSSSSEEEEEETTS-----CEEEEE
T ss_pred CCCEEEEECCC-----CEEEEEECCCCcEEEEEe---------CCC-CcEEEEEEcCCCCEEEEECCCC-----eEEEEE
Confidence 34455555543 347788888765432111 011 111222222 456667776543 577888
Q ss_pred CCCCe-EEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCC
Q 010770 109 TDIWQ-WSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 109 ~~t~~-W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
..++. -...-. . ....-.+++... ++.+++.|+.++ .+.+||+.+.
T Consensus 126 ~~~~~~~~~~~~---~-h~~~v~~v~~~p~~~~~l~sgs~D~-----~v~iwd~~~~ 173 (304)
T 2ynn_A 126 WENNWALEQTFE---G-HEHFVMCVAFNPKDPSTFASGCLDR-----TVKVWSLGQS 173 (304)
T ss_dssp GGGTTEEEEEEC---C-CCSCEEEEEECTTCTTEEEEEETTS-----EEEEEETTCS
T ss_pred CCCCcchhhhhc---c-cCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEECCCC
Confidence 87652 111110 0 111112222222 456777887654 4777887654
No 219
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=77.59 E-value=53 Score=31.75 Aligned_cols=68 Identities=15% Similarity=0.074 Sum_probs=36.6
Q ss_pred cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccc
Q 010770 136 GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLI 213 (501)
Q Consensus 136 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~ 213 (501)
.++.+++.|+.++ .+.+||+.+.+-...- ..+.-......+.+ ++.+++.|+.. ..+.
T Consensus 180 ~~~~~l~~~~~d~-----~i~iwd~~~~~~~~~~---~~~~h~~~v~~~~~s~~~~~l~s~~~d------------g~i~ 239 (437)
T 3gre_A 180 EEKSLLVALTNLS-----RVIIFDIRTLERLQII---ENSPRHGAVSSICIDEECCVLILGTTR------------GIID 239 (437)
T ss_dssp SSCEEEEEEETTS-----EEEEEETTTCCEEEEE---ECCGGGCCEEEEEECTTSCEEEEEETT------------SCEE
T ss_pred CCCCEEEEEeCCC-----eEEEEeCCCCeeeEEE---ccCCCCCceEEEEECCCCCEEEEEcCC------------CeEE
Confidence 3467888887643 5889999877644322 11101111222222 56677777654 2345
Q ss_pred cccCCCCceE
Q 010770 214 EEENETPGWT 223 (501)
Q Consensus 214 ~Yd~~t~~W~ 223 (501)
.||+.+....
T Consensus 240 iwd~~~~~~~ 249 (437)
T 3gre_A 240 IWDIRFNVLI 249 (437)
T ss_dssp EEETTTTEEE
T ss_pred EEEcCCccEE
Confidence 6677765543
No 220
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=77.55 E-value=69 Score=33.04 Aligned_cols=213 Identities=13% Similarity=0.076 Sum_probs=102.9
Q ss_pred EEEEEcccCCCccCCceEEEEcCCCcEEeceecCCC-CCC-CCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEEC
Q 010770 32 KVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNG-SNG-QVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 32 ~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~-~~~-~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
.+|+..-+ .+.+.++|..+.+=...-..... .++ ...|.+|.....++.++..+++-= .....+++.|.
T Consensus 257 ~l~v~n~~-----~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~----~~~g~v~~vd~ 327 (567)
T 1qks_A 257 YAIAGAYW-----PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV----KETGKILLVDY 327 (567)
T ss_dssp EEEEEEEE-----TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE----TTTTEEEEEET
T ss_pred EEEEEEcc-----CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe----cCCCeEEEEec
Confidence 55555332 24577888776543332211100 000 001344544433333444444321 23457888888
Q ss_pred CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccC-CCCCCCCcceeEEEe-C
Q 010770 110 DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVT-GSVPPPRCGHTATMV-E 187 (501)
Q Consensus 110 ~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~-~~~p~~r~~~~~~~~-~ 187 (501)
.+.....+.. ++..+.-|......+++.++.... ..+.+.++|..+++-...-.. +..|.+-.+.....- .
T Consensus 328 ~~~~~~~v~~---i~~~~~~~d~~~~pdgr~~~va~~----~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~~~p~~ 400 (567)
T 1qks_A 328 TDLNNLKTTE---ISAERFLHDGGLDGSHRYFITAAN----ARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANFVHPTF 400 (567)
T ss_dssp TCSSEEEEEE---EECCSSEEEEEECTTSCEEEEEEG----GGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEEEETTT
T ss_pred CCCccceeee---eeccccccCceECCCCCEEEEEeC----CCCeEEEEECCCCcEEEEEeccCcCCCCccceeeECCCC
Confidence 7766555543 556666777666655544433321 256799999999875544333 455555444433222 2
Q ss_pred CEEEEEcccCCCCCcccccccccccccccCCCC-----ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCccc
Q 010770 188 KRLLIYGGRGGGGPIMGDLWALKGLIEEENETP-----GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRY 262 (501)
Q Consensus 188 ~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~-----~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~ 262 (501)
+.+|+.+-... ..+.++|..+. .|+.+.........-.+....-.+..+|+---.+.+
T Consensus 401 g~v~~t~~~g~-----------~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~l~v~~~~~~~------ 463 (567)
T 1qks_A 401 GPVWATSHMGD-----------DSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQYLYVDATLNPE------ 463 (567)
T ss_dssp EEEEEEEBSSS-----------SEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSEEEEECTTCSS------
T ss_pred CcEEEeCCCCC-----------CeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCeEEEecCCCCC------
Confidence 56776653221 22334455442 276654210111110111111134478874422211
Q ss_pred ccccCeEEEEEcCCC
Q 010770 263 DIYYNDTIILDRLSA 277 (501)
Q Consensus 263 ~~~~~~v~~yd~~~~ 277 (501)
....+.|.+||..+.
T Consensus 464 ~~~~~~v~v~d~~~~ 478 (567)
T 1qks_A 464 AEISGSVAVFDIKAM 478 (567)
T ss_dssp HHHHTCEEEEEGGGC
T ss_pred cccCceEEEEECCcc
Confidence 123578999998765
No 221
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=75.59 E-value=51 Score=30.54 Aligned_cols=141 Identities=10% Similarity=0.002 Sum_probs=66.3
Q ss_pred cEEEEECCCCeE-EEEecCCCCCCcCCccEEEEEcC----cEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCC
Q 010770 103 DFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGN----RKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP 177 (501)
Q Consensus 103 ~~~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~----~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~ 177 (501)
.+.+||..+.+. ..+.............+++...+ +.+++.|+.++ .+.+||+.+.+-...-. ...
T Consensus 45 ~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg-----~i~v~d~~~~~~~~~~~--~~~-- 115 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRG-----IIRIINPITMQCIKHYV--GHG-- 115 (366)
T ss_dssp EEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTC-----EEEEECTTTCCEEEEEE--SCC--
T ss_pred EEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCC-----EEEEEEchhceEeeeec--CCC--
Confidence 477777765432 22321111111222233334333 57888887653 48888888765433210 111
Q ss_pred CcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCC
Q 010770 178 RCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHG 254 (501)
Q Consensus 178 r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~ 254 (501)
..-.++... ++.+++.|+.. ..+..||+.+.+-...-.. .......-.+++. -++..++.|+.+
T Consensus 116 ~~i~~~~~~~~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~l~~~~~d 182 (366)
T 3k26_A 116 NAINELKFHPRDPNLLLSVSKD------------HALRLWNIQTDTLVAIFGG-VEGHRDEVLSADYDLLGEKIMSCGMD 182 (366)
T ss_dssp SCEEEEEECSSCTTEEEEEETT------------SCEEEEETTTTEEEEEECS-TTSCSSCEEEEEECTTSSEEEEEETT
T ss_pred CcEEEEEECCCCCCEEEEEeCC------------CeEEEEEeecCeEEEEecc-cccccCceeEEEECCCCCEEEEecCC
Confidence 111122222 45677777653 2355667776654333200 0111111223333 344556666543
Q ss_pred CCCCCcccccccCeEEEEEcCCC
Q 010770 255 TGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 255 ~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
..+.+||+.+.
T Consensus 183 ------------g~i~i~d~~~~ 193 (366)
T 3k26_A 183 ------------HSLKLWRINSK 193 (366)
T ss_dssp ------------SCEEEEESCSH
T ss_pred ------------CCEEEEECCCC
Confidence 35788887764
No 222
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=75.19 E-value=50 Score=30.22 Aligned_cols=58 Identities=9% Similarity=0.014 Sum_probs=34.6
Q ss_pred CcEEEEECCCCeEEEEecCCCCCCcC-CccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLPSPR-DFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p~~r-~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
+.+.++|+.+.+-..... .+... ..+.++...++ .+|+.++. ...++++|+.+.+-..
T Consensus 11 ~~v~~~d~~~~~~~~~~~---~~~~~~~~~~~~~s~dg~~l~v~~~~-----~~~v~~~d~~~~~~~~ 70 (337)
T 1pby_B 11 DKLVVIDTEKMAVDKVIT---IADAGPTPMVPMVAPGGRIAYATVNK-----SESLVKIDLVTGETLG 70 (337)
T ss_dssp TEEEEEETTTTEEEEEEE---CTTCTTCCCCEEECTTSSEEEEEETT-----TTEEEEEETTTCCEEE
T ss_pred CeEEEEECCCCcEEEEEE---cCCCCCCccceEEcCCCCEEEEEeCC-----CCeEEEEECCCCCeEe
Confidence 468899998887654332 22211 12344444454 67776653 2458999998877543
No 223
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=73.80 E-value=57 Score=30.21 Aligned_cols=68 Identities=6% Similarity=0.002 Sum_probs=40.1
Q ss_pred CEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 87 CHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 87 ~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
+.+++.|+.+ ..+.+||+.+.+-...-. . ....-.+++... ++.+++.|+.++ .+.+||+.+.+-
T Consensus 85 ~~~l~~~~~d-----g~i~v~d~~~~~~~~~~~---~-~~~~i~~~~~~~~~~~~l~s~~~dg-----~i~iwd~~~~~~ 150 (366)
T 3k26_A 85 HPLLAVAGSR-----GIIRIINPITMQCIKHYV---G-HGNAINELKFHPRDPNLLLSVSKDH-----ALRLWNIQTDTL 150 (366)
T ss_dssp CEEEEEEETT-----CEEEEECTTTCCEEEEEE---S-CCSCEEEEEECSSCTTEEEEEETTS-----CEEEEETTTTEE
T ss_pred CCEEEEecCC-----CEEEEEEchhceEeeeec---C-CCCcEEEEEECCCCCCEEEEEeCCC-----eEEEEEeecCeE
Confidence 4677777754 358889988765433221 1 111122333333 567788887644 488999988765
Q ss_pred EEc
Q 010770 166 MQL 168 (501)
Q Consensus 166 ~~~ 168 (501)
...
T Consensus 151 ~~~ 153 (366)
T 3k26_A 151 VAI 153 (366)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 224
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=73.75 E-value=15 Score=32.99 Aligned_cols=108 Identities=18% Similarity=0.231 Sum_probs=56.3
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd 108 (501)
.++.+|+|=| +.+|+++.....+........ =+.+|. .--++...++++|+|=| +.+|+|+
T Consensus 27 ~~g~~yfFkg-------~~~Wr~~~~~~~~~p~~Is~~---wpgLP~--~IDAA~~~~~~~yfFkG-------~~yw~~~ 87 (219)
T 1hxn_A 27 NHGATYVFSG-------SHYWRLDTNRDGWHSWPIAHQ---WPQGPS--TVDAAFSWEDKLYLIQD-------TKVYVFL 87 (219)
T ss_dssp TTSCEEEEET-------TEEEESSSSSCTTCCEEGGGT---CTTSCS--SCSEEEEETTEEEEEET-------TEEEEEE
T ss_pred CCCcEEEEeC-------CEEEEEcCCCCCCCceEhhhh---ccCCCC--CccEEEEECCcEEEecC-------CEEEEEe
Confidence 4578999977 457777654332222111100 011232 22234445899999966 4689998
Q ss_pred CCCC-eE-----EEEecCCCCCCc--CCccEEEE-E-cCcEEEEEecCCCCcccccEEEEECCC
Q 010770 109 TDIW-QW-----SELTSFGDLPSP--RDFAAASA-I-GNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 109 ~~t~-~W-----~~~~~~~~~p~~--r~~~~~~~-~-~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
..++ +- ..+...-++|.. ...--+++ . .++++|+|-| +..|+||..+
T Consensus 88 ~~~~~~~~~gyPk~i~~~~G~p~~~~~~~IDAA~~~~~~gk~yfFkG-------~~ywr~d~~~ 144 (219)
T 1hxn_A 88 TKGGYTLVNGYPKRLEKELGSPPVISLEAVDAAFVCPGSSRLHIMAG-------RRLWWLDLKS 144 (219)
T ss_dssp CSSSCEECTTCCEEHHHHHCCCSSCCCSCCCEEECCTTCCEEEEEET-------TEEEEEEGGG
T ss_pred CCCCceecCCCCeehhhccCCCCcccccccceeEEecCCCEEEEEeC-------CEEEEEeCCC
Confidence 7532 11 122110124433 11122333 2 4679999987 4579999754
No 225
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=73.49 E-value=51 Score=34.96 Aligned_cols=121 Identities=12% Similarity=0.079 Sum_probs=63.6
Q ss_pred cCcEEEEEecCCCCcccccEEEEECCCCc--eEEcccCCCC--CCC---CcceeEEEeCCEEEEEcccCCCCCccccccc
Q 010770 136 GNRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSV--PPP---RCGHTATMVEKRLLIYGGRGGGGPIMGDLWA 208 (501)
Q Consensus 136 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--p~~---r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~ 208 (501)
.++.||+... ...++.+|..|.+ |+.-...... +.. ....+.++.+++||+....
T Consensus 69 ~~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~v~~~d------------ 130 (689)
T 1yiq_A 69 VDGVMYTTGP------FSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKVYVGVLD------------ 130 (689)
T ss_dssp ETTEEEEECG------GGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEEEEECTT------------
T ss_pred ECCEEEEEcC------CCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEEEEEccC------------
Confidence 3569998754 2459999988765 8864311100 000 1122345678888885421
Q ss_pred ccccccccCCCC--ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc--eEEc
Q 010770 209 LKGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRL 282 (501)
Q Consensus 209 l~~~~~Yd~~t~--~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~v 282 (501)
..++.+|..|. .|+.-.............+.++.++.+|+-.+.... .....++.||..+.+ |+.-
T Consensus 131 -g~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 200 (689)
T 1yiq_A 131 -GRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEF-------GVRGYVTAYDAETGKEAWRFY 200 (689)
T ss_dssp -SEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred -CEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCcc-------CCCCEEEEEECCCCcEEEEec
Confidence 22445577665 477544101111112222334568887773322110 123579999998765 8754
No 226
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=73.41 E-value=73 Score=31.30 Aligned_cols=209 Identities=14% Similarity=0.169 Sum_probs=111.5
Q ss_pred CCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEE-C-----CCCe-EEEEecCCCCCCc
Q 010770 54 DNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLD-T-----DIWQ-WSELTSFGDLPSP 126 (501)
Q Consensus 54 ~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd-~-----~t~~-W~~~~~~~~~p~~ 126 (501)
....|..-... -.|..-.-|+.+.+++.=|.+|=.+++..-..+-.+- + .... =++++. . -.+
T Consensus 268 ~~spW~~t~L~-------~i~~vTe~HSFa~i~~~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~s--e-y~~ 337 (670)
T 3ju4_A 268 HKSPWRKTDLG-------LIPSVTEVHSFATIDNNGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIPS--E-YEP 337 (670)
T ss_dssp TTSCCEEEECC-------SCTTCSEEEEEEECSSSCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECCG--G-GCT
T ss_pred ccCCceecccc-------cccceeeeeeeeEecCCceEEEeccCCCCcceeeEEEecccccCCcceeeeechh--h-hcc
Confidence 34566554332 2456667789999998888998776655444433321 1 1111 122221 1 111
Q ss_pred CCccEEEEEcCcEEEEEe-cCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCc---
Q 010770 127 RDFAAASAIGNRKIVMYG-GWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPI--- 202 (501)
Q Consensus 127 r~~~~~~~~~~~~iyv~G-G~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~--- 202 (501)
-..-.++-.-++.||+.- |..+...-+.+.+-+..-.+|+.+..+.. .-....-.+.+++.||+||-....+..
T Consensus 338 ~AsEPCvkyYdgvLyLtTRgt~~~~~GS~L~rs~d~Gq~w~slrfp~n--vHhtnlPFakvgD~l~mFgsERA~nEWE~G 415 (670)
T 3ju4_A 338 DASEPCIKYYDGVLYLITRGTRGDRLGSSLHRSRDIGQTWESLRFPHN--VHHTTLPFAKVGDDLIMFGSERAENEWEAG 415 (670)
T ss_dssp TEEEEEEEEETTEEEEEEEESCTTSCCCEEEEESSTTSSCEEEECTTC--CCSSCCCEEEETTEEEEEEECSSTTCSSTT
T ss_pred ccccchhhhhCCEEEEEecCcCCCCCcceeeeecccCCchhheecccc--ccccCCCcceeCCEEEEEeccccccccccC
Confidence 111123334577999875 44555566778888888899999863211 112223456679999999976542210
Q ss_pred -ccccc--------c-ccccccccCCCCceEEeec---CCCCCCCceeeE-EEEeCCEE-EEEcCCCCCCCCc-------
Q 010770 203 -MGDLW--------A-LKGLIEEENETPGWTQLKL---PGQAPSSRCGHT-ITSGGHYL-LLFGGHGTGGWLS------- 260 (501)
Q Consensus 203 -~~d~~--------~-l~~~~~Yd~~t~~W~~~~~---~g~~p~~r~~~s-~~~~~~~i-~v~GG~~~~~~~~------- 260 (501)
.++-| . --.+-.+..+.-+|..+.. .|.......+.+ .|+.++-| |+|||.+.-+..+
T Consensus 416 ~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd~~np~s~gdN~~k 495 (670)
T 3ju4_A 416 APDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGEDHFNPWTYGDNSAK 495 (670)
T ss_dssp CCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBCSCCCCTTTTTTTC
T ss_pred CCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcccCCcccccccccc
Confidence 11111 1 1123344556667877763 244444444544 44556654 5899864322111
Q ss_pred ---ccccccCeEEEEEc
Q 010770 261 ---RYDIYYNDTIILDR 274 (501)
Q Consensus 261 ---~~~~~~~~v~~yd~ 274 (501)
.-+-...++|+|-+
T Consensus 496 ~~~~~~Ghp~dlY~~ri 512 (670)
T 3ju4_A 496 DPFKSDGHPSDLYCYKM 512 (670)
T ss_dssp CTTSTTCCCCEEEEEEE
T ss_pred CccccCCCCcceEEEEE
Confidence 11224567888865
No 227
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=72.80 E-value=91 Score=32.12 Aligned_cols=75 Identities=15% Similarity=0.131 Sum_probs=40.7
Q ss_pred cccccccCCCCc--eEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc--eEEcccC
Q 010770 210 KGLIEEENETPG--WTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRLPIG 285 (501)
Q Consensus 210 ~~~~~Yd~~t~~--W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~v~~~ 285 (501)
..+..+|+.+.+ |+.-. .. +..+..++..++.+|+ |..+ ..++++|..+.+ |+.-...
T Consensus 444 g~l~a~D~~tG~~~W~~~~---~~--~~~~~~~~t~gg~v~~-g~~d------------g~l~a~D~~tG~~lw~~~~~~ 505 (571)
T 2ad6_A 444 GQIRAFDLTTGKAKWTKWE---KF--AAWGGTLYTKGGLVWY-ATLD------------GYLKALDNKDGKELWNFKMPS 505 (571)
T ss_dssp EEEEEECTTTCCEEEEEEE---SS--CCCSBCEEETTTEEEE-ECTT------------SEEEEEETTTCCEEEEEECSS
T ss_pred CeEEEEECCCCCEEEEecC---CC--CccceeEEECCCEEEE-EcCC------------CeEEEEECCCCCEEEEEeCCC
Confidence 346677887764 87543 11 1122233445777777 4321 468999987664 6543221
Q ss_pred CCCCCcccceEEE-EECCEEEEE
Q 010770 286 NEPPPARAYHSMT-CLGSLYLLF 307 (501)
Q Consensus 286 ~~~p~~r~~~~~~-~~~~~iyv~ 307 (501)
......++ ..++++||.
T Consensus 506 -----~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 506 -----GGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp -----CCCSCCEEEEETTEEEEE
T ss_pred -----CcEeeeEEEEECCEEEEE
Confidence 11222233 368888874
No 228
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=72.44 E-value=57 Score=29.67 Aligned_cols=111 Identities=12% Similarity=0.079 Sum_probs=55.4
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEe---CCEEEEEccccCCCCCCc
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~~~~~~~ 103 (501)
.++..++.|+.++ .+.+||..+. .+..+.... .....-.+++.. ++.+++.|+.++ .
T Consensus 21 ~~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~~~~~--------~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~ 82 (351)
T 3f3f_A 21 FYGRHVATCSSDQ-----HIKVFKLDKDTSNWELSDSWR--------AHDSSIVAIDWASPEYGRIIASASYDK-----T 82 (351)
T ss_dssp SSSSEEEEEETTS-----EEEEEEECSSSCCEEEEEEEE--------CCSSCEEEEEECCGGGCSEEEEEETTS-----C
T ss_pred CCCCEEEEeeCCC-----eEEEEECCCCCCcceecceec--------cCCCcEEEEEEcCCCCCCEEEEEcCCC-----e
Confidence 4456677776433 4777777643 444433221 011111223333 366777777543 4
Q ss_pred EEEEECCCC-------eEEEEecCCCCCCcCCccEEEEEcC--cEEEEEecCCCCcccccEEEEECCCCc
Q 010770 104 FWVLDTDIW-------QWSELTSFGDLPSPRDFAAASAIGN--RKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 104 ~~~yd~~t~-------~W~~~~~~~~~p~~r~~~~~~~~~~--~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+.+||+.+. .|..+..... ....-.+++...+ +.+++.|+.++ .+.+||+.+.+
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~l~~~~~dg-----~v~iwd~~~~~ 145 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLND--SKGSLYSVKFAPAHLGLKLACLGNDG-----ILRLYDALEPS 145 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECC--CSSCEEEEEECCGGGCSEEEEEETTC-----EEEEEECSSTT
T ss_pred EEEEecCCCcccccccCcceeeeecc--cCCceeEEEEcCCCCCcEEEEecCCC-----cEEEecCCChH
Confidence 777887654 3444432111 1111223333333 56777777543 47888876654
No 229
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=72.31 E-value=52 Score=32.92 Aligned_cols=154 Identities=10% Similarity=0.119 Sum_probs=75.7
Q ss_pred EEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecC---CCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEE
Q 010770 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSF---GDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~---~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 156 (501)
+++.+++++|+|-|. -+|+++.....+...... ..+|... -++... .++++|+|=| +.+|
T Consensus 267 Ai~~~~ge~y~Fkg~-------~~wr~~~~~~~~~p~~I~~~Wp~LP~~i--DAa~~~~~~g~~~fFKg-------~~~W 330 (450)
T 1su3_A 267 AITTIRGEVMFFKDR-------FYMRTNPFYPEVELNFISVFWPQLPNGL--EAAYEFADRDEVRFFKG-------NKYW 330 (450)
T ss_dssp EEEEETTEEEEEETT-------EEEECCTTSSSCEEEEGGGTCTTSCSSC--CEEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEecCCeEEEEeCC-------EEEEEcCCCCcccceehhHhccCCCCCe--eEEEEEcCCCeEEEEeC-------CEEE
Confidence 455678999999763 356665544333222111 1234322 223333 2569999976 3477
Q ss_pred EEECCCC---ceEEcc-cCCCCCC--CCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCce-----EE
Q 010770 157 VLDTISL---EWMQLP-VTGSVPP--PRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW-----TQ 224 (501)
Q Consensus 157 ~yd~~t~---~W~~~~-~~~~~p~--~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W-----~~ 224 (501)
+|+..+. -=..+. .. ..|. .....+.... ++++|+|-|. ..++||..+.+- ..
T Consensus 331 ~~~~~~~~~gyP~~i~~~~-g~P~~~~~IDAA~~~~~~~k~yfFkG~--------------~yw~yd~~~~~~~~gYPk~ 395 (450)
T 1su3_A 331 AVQGQNVLHGYPKDIYSSF-GFPRTVKHIDAALSEENTGKTYFFVAN--------------KYWRYDEYKRSMDPGYPKM 395 (450)
T ss_dssp EEETTEECTTCSEEHHHHH-CCCTTCCCCCEEEEETTTTEEEEEETT--------------EEEEEETTTTEECSSCSEE
T ss_pred EecCCcccCCCceeeehhh-cCCCCCCccceEEEEcCCCeEEEEeCC--------------EEEEEeCCCccccCCCCcc
Confidence 7764321 001111 00 1222 1223333222 5899999773 223444433221 11
Q ss_pred ee--cCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEc
Q 010770 225 LK--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRL 282 (501)
Q Consensus 225 ~~--~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v 282 (501)
+. .+| .| .... +++..++++|+|-| +..|+||..+.+-...
T Consensus 396 I~~~fpg-ip-~~iD-AA~~~~g~~YFFkg--------------~~ywr~d~~~~~v~~~ 438 (450)
T 1su3_A 396 IAHDFPG-IG-HKVD-AVFMKDGFFYFFHG--------------TRQYKFDPKTKRILTL 438 (450)
T ss_dssp HHHHSTT-SC-SCCS-EEEEETTEEEEEET--------------TEEEEEETTTTEEEEE
T ss_pred hhhcCCC-CC-CCcc-EEEEcCCeEEEEeC--------------CEEEEEECCcceEecc
Confidence 11 111 22 2222 34446889999987 4579999887765543
No 230
>3ju4_A Endo-N-acetylneuraminidase; endonf, polysia, high-resolution, glycosidase, hydrolase; HET: SLB; 0.98A {Enterobacteria phage K1F} PDB: 3gvl_A* 3gvj_A* 3gvk_A* 1v0e_A 1v0f_A*
Probab=72.25 E-value=78 Score=31.11 Aligned_cols=196 Identities=17% Similarity=0.251 Sum_probs=97.9
Q ss_pred EEEEE--CCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEE--EEE-----CCCCceEEcccCCCC
Q 010770 104 FWVLD--TDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY--VLD-----TISLEWMQLPVTGSV 174 (501)
Q Consensus 104 ~~~yd--~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~--~yd-----~~t~~W~~~~~~~~~ 174 (501)
-|.+- ...+.|+.-. .+..|....-|+.|.+.+ .-|++|=..++.....+- .|. +....=+.++ ...
T Consensus 260 ~W~~~T~F~~spW~~t~-L~~i~~vTe~HSFa~i~~-~~fa~GyHnGDv~PRe~G~~yfs~~~~sp~~~vrr~i~--sey 335 (670)
T 3ju4_A 260 NWHMGTSFHKSPWRKTD-LGLIPSVTEVHSFATIDN-NGFAMGYHQGDVAPREVGLFYFPDAFNSPSNYVRRQIP--SEY 335 (670)
T ss_dssp EEEEEECSTTSCCEEEE-CCSCTTCSEEEEEEECSS-SCEEEEEEECSSSSCEEEEEEETTTTTCTTCCEEEECC--GGG
T ss_pred eeeeeeeeccCCceecc-cccccceeeeeeeeEecC-CceEEEeccCCCCcceeeEEEecccccCCcceeeeech--hhh
Confidence 44443 3556676543 245777788899999966 556777555443333332 221 1111222222 111
Q ss_pred CCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCC
Q 010770 175 PPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (501)
Q Consensus 175 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~ 254 (501)
...-.-.++-..++.||+.--.+.....- +.+.+-+.....|+.+..+...-. ...-.+..++.||+||-..
T Consensus 336 ~~~AsEPCvkyYdgvLyLtTRgt~~~~~G------S~L~rs~d~Gq~w~slrfp~nvHh--tnlPFakvgD~l~mFgsER 407 (670)
T 3ju4_A 336 EPDASEPCIKYYDGVLYLITRGTRGDRLG------SSLHRSRDIGQTWESLRFPHNVHH--TTLPFAKVGDDLIMFGSER 407 (670)
T ss_dssp CTTEEEEEEEEETTEEEEEEEESCTTSCC------CEEEEESSTTSSCEEEECTTCCCS--SCCCEEEETTEEEEEEECS
T ss_pred ccccccchhhhhCCEEEEEecCcCCCCCc------ceeeeecccCCchhheeccccccc--cCCCcceeCCEEEEEeccc
Confidence 12223344555699999986332221111 233444677889999985422111 1112456899999999532
Q ss_pred C------CCCCcccccccCeEEEEEcCCC-------ceEEcccC---CCCCCcccce-EEEEECCEE-EEEccCC
Q 010770 255 T------GGWLSRYDIYYNDTIILDRLSA-------QWKRLPIG---NEPPPARAYH-SMTCLGSLY-LLFGGFD 311 (501)
Q Consensus 255 ~------~~~~~~~~~~~~~v~~yd~~~~-------~W~~v~~~---~~~p~~r~~~-~~~~~~~~i-yv~GG~~ 311 (501)
. +....++..-....+..-..-+ +|.-+... +.....-.+- +.|+-++.| |+|||.+
T Consensus 408 A~nEWE~G~pD~RY~a~yPRtF~~r~nv~~W~~d~~ew~nItdqIYqG~ivNsavGVGSv~vKD~~lyyiFGgEd 482 (670)
T 3ju4_A 408 AENEWEAGAPDDRYKASYPRTFYARLNVNNWNADDIEWVNITDQIYQGGIVNSGVGVGSVVVKDNYIYYMFGGED 482 (670)
T ss_dssp STTCSSTTCCCCCSSCBCCEEEEEEEETTTCCCTTCCCEEEEECBBCCSSSCCCSEEEEEEEETTEEEEEEEEBC
T ss_pred cccccccCCCcccccccCCceEEEEeecccCCccceEEEEeecceeccccccccccceeEEEeCCEEEEEecCcc
Confidence 2 1122344444445544443333 45444321 1111222333 344556765 4899976
No 231
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=71.93 E-value=45 Score=37.22 Aligned_cols=161 Identities=13% Similarity=0.081 Sum_probs=83.1
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEE-EE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFW-VL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~-~y 107 (501)
.+++.++++. ...+++++..++....+.. .+..+..+.+.. +++.+++++. ...+| ++
T Consensus 306 pdG~~la~~~------~~~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~s-dg~~l~~~s~-----~~~l~~~~ 364 (1045)
T 1k32_A 306 LDGDLIAFVS------RGQAFIQDVSGTYVLKVPE---------PLRIRYVRRGGD-TKVAFIHGTR-----EGDFLGIY 364 (1045)
T ss_dssp CGGGCEEEEE------TTEEEEECTTSSBEEECSC---------CSCEEEEEECSS-SEEEEEEEET-----TEEEEEEE
T ss_pred CCCCEEEEEE------cCEEEEEcCCCCceEEccC---------CCcceEEeeeEc-CCCeEEEEEC-----CCceEEEE
Confidence 4555444444 2468888888776555421 111122333333 5554444432 24688 89
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe-
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV- 186 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~- 186 (501)
|..+.+-..+.. ........+...+++.+++++.+ ..++++|+.+.+-..+... ..... ..++..
T Consensus 365 d~~~~~~~~l~~-----~~~~~~~~~~SpDG~~la~~~~~-----~~v~~~d~~tg~~~~~~~~---~~~~v-~~~~~Sp 430 (1045)
T 1k32_A 365 DYRTGKAEKFEE-----NLGNVFAMGVDRNGKFAVVANDR-----FEIMTVDLETGKPTVIERS---REAMI-TDFTISD 430 (1045)
T ss_dssp ETTTCCEEECCC-----CCCSEEEEEECTTSSEEEEEETT-----SEEEEEETTTCCEEEEEEC---SSSCC-CCEEECT
T ss_pred ECCCCCceEecC-----CccceeeeEECCCCCEEEEECCC-----CeEEEEECCCCceEEeccC---CCCCc-cceEECC
Confidence 998887655531 11222344445566666666543 3699999999887766411 11111 222222
Q ss_pred CCEEEEEcccCCCCCcccccccccccccccCCCCceEEee
Q 010770 187 EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK 226 (501)
Q Consensus 187 ~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~ 226 (501)
+++.+++++........ .+.-..+..+|+.+.+...+.
T Consensus 431 DG~~la~~~~~~~~~~~--~~~~~~i~l~d~~~g~~~~l~ 468 (1045)
T 1k32_A 431 NSRFIAYGFPLKHGETD--GYVMQAIHVYDMEGRKIFAAT 468 (1045)
T ss_dssp TSCEEEEEEEECSSTTC--SCCEEEEEEEETTTTEEEECS
T ss_pred CCCeEEEEecCcccccc--CCCCCeEEEEECCCCcEEEee
Confidence 55555555442200000 001245677788887755444
No 232
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=71.93 E-value=50 Score=28.80 Aligned_cols=108 Identities=14% Similarity=0.236 Sum_probs=60.1
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcE---EeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCC
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLW---FQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W---~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~ 102 (501)
..++++|+|-| +.+|+|+..+... ..+... .+.+|.... -++... ++++|+|-| +
T Consensus 59 ~~~g~~yfFkg-------~~yw~~~~~~~~~gyPk~I~~~-----~~glP~~~I-DAA~~~~~~g~~yfFkG-------~ 118 (196)
T 3c7x_A 59 RKDGKFVFFKG-------DKHWVFDEASLEPGYPKHIKEL-----GRGLPTDKI-DAALFWMPNGKTYFFRG-------N 118 (196)
T ss_dssp CTTSCEEEEET-------TEEEEEETTEECTTCSEEGGGT-----CBSCCSSCC-SEEEEETTTTEEEEEET-------T
T ss_pred eCCCcEEEecC-------CEEEEEeCCcccCCCCeEhhhc-----CCCCCCCcc-cEEEEEccCCEEEEEEC-------C
Confidence 35578999977 6689998643211 112111 112332222 233332 579999966 3
Q ss_pred cEEEEECCCCeEEE-----EecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCc
Q 010770 103 DFWVLDTDIWQWSE-----LTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 103 ~~~~yd~~t~~W~~-----~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
..|+||..+++-.. +..-..+|. .-.++....++ ++|+|-| +..|+||..+.+
T Consensus 119 ~yw~yd~~~~~v~~gyPk~i~~~~gip~--~idaAf~~~~~~~~YfFkg-------~~y~r~d~~~~~ 177 (196)
T 3c7x_A 119 KYYRFNEELRAVDSEYPKNIKVWEGIPE--SPRGSFMGSDEVFTYFYKG-------NKYWKFNNQKLK 177 (196)
T ss_dssp EEEEEETTTTEECTTCSEEGGGSBTCCS--SCSEEEECTTSSEEEEEET-------TEEEEEETTTTE
T ss_pred EEEEEeCCcccccCCCCccHHHCCCcCC--CcceeEEecCCCEEEEEEC-------CEEEEEECCcce
Confidence 68999998764321 111112332 22333344454 9999977 458999987764
No 233
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=71.59 E-value=55 Score=29.10 Aligned_cols=66 Identities=20% Similarity=0.298 Sum_probs=35.8
Q ss_pred eEEEEeCCEEEEEccccCCCCCCcEEEEECCCCe-EE--EEecC-CCCCCcCCccEEEEEcCcEEEEEecCCCCcccccE
Q 010770 80 HIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ-WS--ELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDV 155 (501)
Q Consensus 80 h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~--~~~~~-~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~ 155 (501)
-+++.+++++|+|=| +.+|+++..... .. .+... ..+|. ...++.....++++|+|-| +..
T Consensus 34 DAi~~~~g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~wp~lp~-~IDAA~~~~~~~k~yfFkG-------~~y 98 (218)
T 1gen_A 34 DGIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPE-KIDAVYEAPQEEKAVFFAG-------NEY 98 (218)
T ss_dssp SEEEEETTEEEEEET-------TEEEEESSTTSCCEEEEEGGGTCTTSCS-CCSEEEEETTTTEEEEEET-------TEE
T ss_pred eEEEeCCCcEEEEEC-------CEEEEEeCCCCccCCCEEHHHhcCCCCC-CccEEEEECCCCEEEEEeC-------CEE
Confidence 445567899999966 246666554321 11 12211 12343 2222222224579999977 458
Q ss_pred EEEEC
Q 010770 156 YVLDT 160 (501)
Q Consensus 156 ~~yd~ 160 (501)
|+||.
T Consensus 99 W~y~~ 103 (218)
T 1gen_A 99 WIYSA 103 (218)
T ss_dssp EEEET
T ss_pred EEEcC
Confidence 88985
No 234
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=71.42 E-value=50 Score=30.55 Aligned_cols=70 Identities=10% Similarity=-0.034 Sum_probs=38.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE-c--CcEEEEEecCCCCcccccEEEEECCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-G--NRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
+++.++.|+.+ ..+.+||+.++....+.. +......-..+.+ . ++.+++.|+.++ .+.++|+.+
T Consensus 24 ~g~~lasgs~D-----~~v~lwd~~~~~~~~~~~---l~gH~~~V~~v~~~~~~~~~~l~s~s~D~-----~v~iWd~~~ 90 (316)
T 3bg1_A 24 YGTRLATCSSD-----RSVKIFDVRNGGQILIAD---LRGHEGPVWQVAWAHPMYGNILASCSYDR-----KVIIWREEN 90 (316)
T ss_dssp GGCEEEEEETT-----TEEEEEEEETTEEEEEEE---EECCSSCEEEEEECCGGGSSCEEEEETTS-----CEEEECCSS
T ss_pred CCCEEEEEeCC-----CeEEEEEecCCCcEEEEE---EcCCCccEEEEEeCCCCCCCEEEEEECCC-----EEEEEECCC
Confidence 45666777643 357778887765433321 1111111122222 2 256777777654 378888888
Q ss_pred CceEEc
Q 010770 163 LEWMQL 168 (501)
Q Consensus 163 ~~W~~~ 168 (501)
.+|..+
T Consensus 91 ~~~~~~ 96 (316)
T 3bg1_A 91 GTWEKS 96 (316)
T ss_dssp SCCCEE
T ss_pred CcceEE
Confidence 777554
No 235
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=70.89 E-value=53 Score=32.88 Aligned_cols=157 Identities=11% Similarity=0.048 Sum_probs=77.5
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRL 101 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~ 101 (501)
+++.+. +.+|+|=| +.+|+++.....+........ =+.+|. .--++... ++++|+|=|
T Consensus 267 Ai~~~~-ge~y~Fkg-------~~~wr~~~~~~~~~p~~I~~~---Wp~LP~--~iDAa~~~~~~g~~~fFKg------- 326 (450)
T 1su3_A 267 AITTIR-GEVMFFKD-------RFYMRTNPFYPEVELNFISVF---WPQLPN--GLEAAYEFADRDEVRFFKG------- 326 (450)
T ss_dssp EEEEET-TEEEEEET-------TEEEECCTTSSSCEEEEGGGT---CTTSCS--SCCEEEEEGGGTEEEEEET-------
T ss_pred eEEecC-CeEEEEeC-------CEEEEEcCCCCcccceehhHh---ccCCCC--CeeEEEEEcCCCeEEEEeC-------
Confidence 344455 78999987 456777665444433221110 011222 12233332 689999966
Q ss_pred CcEEEEECCC---CeEEEEecCCCCCCcC-CccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEE-----ccc-
Q 010770 102 GDFWVLDTDI---WQWSELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ-----LPV- 170 (501)
Q Consensus 102 ~~~~~yd~~t---~~W~~~~~~~~~p~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~-----~~~- 170 (501)
+.+|+|+..+ +-=..+...-.+|... .--++... .++++|+|-| +..|+||..+.+-.. +..
T Consensus 327 ~~~W~~~~~~~~~gyP~~i~~~~g~P~~~~~IDAA~~~~~~~k~yfFkG-------~~yw~yd~~~~~~~~gYPk~I~~~ 399 (450)
T 1su3_A 327 NKYWAVQGQNVLHGYPKDIYSSFGFPRTVKHIDAALSEENTGKTYFFVA-------NKYWRYDEYKRSMDPGYPKMIAHD 399 (450)
T ss_dssp TEEEEEETTEECTTCSEEHHHHHCCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCSEEHHHH
T ss_pred CEEEEecCCcccCCCceeeehhhcCCCCCCccceEEEEcCCCeEEEEeC-------CEEEEEeCCCccccCCCCcchhhc
Confidence 3578887432 0001121001233321 11223333 4579999977 468999976543221 110
Q ss_pred CCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceE
Q 010770 171 TGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWT 223 (501)
Q Consensus 171 ~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~ 223 (501)
-..+| .... ++...++++|+|-|. ..++||..+.+-.
T Consensus 400 fpgip-~~iD-AA~~~~g~~YFFkg~--------------~ywr~d~~~~~v~ 436 (450)
T 1su3_A 400 FPGIG-HKVD-AVFMKDGFFYFFHGT--------------RQYKFDPKTKRIL 436 (450)
T ss_dssp STTSC-SCCS-EEEEETTEEEEEETT--------------EEEEEETTTTEEE
T ss_pred CCCCC-CCcc-EEEEcCCeEEEEeCC--------------EEEEEECCcceEe
Confidence 00122 1222 333468899999773 3445676665544
No 236
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=70.49 E-value=70 Score=29.85 Aligned_cols=110 Identities=10% Similarity=-0.003 Sum_probs=56.5
Q ss_pred ECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEcccc-CCCCCCcEEE
Q 010770 28 IGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF-GSRRLGDFWV 106 (501)
Q Consensus 28 ~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~-~~~~~~~~~~ 106 (501)
..++.+++... ..+++||+.+++...+..... ..+..+....++.-++++|+..... .......+++
T Consensus 98 ~~dg~l~v~~~-------~gl~~~d~~~g~~~~~~~~~~-----~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~ 165 (326)
T 2ghs_A 98 ISDSKQLIASD-------DGLFLRDTATGVLTLHAELES-----DLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYH 165 (326)
T ss_dssp EETTEEEEEET-------TEEEEEETTTCCEEEEECSST-----TCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEE
T ss_pred eCCCeEEEEEC-------CCEEEEECCCCcEEEEeeCCC-----CCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEE
Confidence 34466666431 249999999998877643210 1111222222222356777643111 1123456899
Q ss_pred EECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECC
Q 010770 107 LDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 107 yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
++ +.+...+.. .. ....+.+...++ .+|+.... .+.+++||..
T Consensus 166 ~~--~g~~~~~~~--~~---~~~~~i~~s~dg~~lyv~~~~-----~~~I~~~d~~ 209 (326)
T 2ghs_A 166 VA--KGKVTKLFA--DI---SIPNSICFSPDGTTGYFVDTK-----VNRLMRVPLD 209 (326)
T ss_dssp EE--TTEEEEEEE--EE---SSEEEEEECTTSCEEEEEETT-----TCEEEEEEBC
T ss_pred Ee--CCcEEEeeC--CC---cccCCeEEcCCCCEEEEEECC-----CCEEEEEEcc
Confidence 99 566665532 11 111233344444 57776432 3468999975
No 237
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=70.26 E-value=92 Score=32.98 Aligned_cols=18 Identities=0% Similarity=-0.143 Sum_probs=14.1
Q ss_pred CeEEEEEcCCCceEEccc
Q 010770 267 NDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 267 ~~v~~yd~~~~~W~~v~~ 284 (501)
..+|.||..+..-..+..
T Consensus 344 ~~l~~~~~~~~~~~~lT~ 361 (740)
T 4a5s_A 344 RHICYFQIDKKDCTFITK 361 (740)
T ss_dssp EEEEEEETTCSSCEESCC
T ss_pred eEEEEEECCCCceEeccc
Confidence 679999998877666664
No 238
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=69.53 E-value=70 Score=29.48 Aligned_cols=117 Identities=11% Similarity=-0.062 Sum_probs=59.2
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe-CCEEEEEccccCCCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI-DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~-~~~iyv~GG~~~~~~~~ 102 (501)
.+++..++.+|+.....+ ...+++||+.+++...+... +..+.....+.. ++.+|+.-. ...
T Consensus 76 gia~~~dG~l~vad~~~~---~~~v~~~d~~~g~~~~~~~~---------~~~~~~~g~~~~~~~~~~v~d~-----~~g 138 (306)
T 2p4o_A 76 GLAFTSNGDLVATGWNAD---SIPVVSLVKSDGTVETLLTL---------PDAIFLNGITPLSDTQYLTADS-----YRG 138 (306)
T ss_dssp EEEECTTSCEEEEEECTT---SCEEEEEECTTSCEEEEEEC---------TTCSCEEEEEESSSSEEEEEET-----TTT
T ss_pred eEEEcCCCcEEEEeccCC---cceEEEEcCCCCeEEEEEeC---------CCccccCcccccCCCcEEEEEC-----CCC
Confidence 344444566777543211 12488899888887766532 233444444433 456777531 234
Q ss_pred cEEEEECCCCeEEE--EecCC--CCCCcC-CccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 103 DFWVLDTDIWQWSE--LTSFG--DLPSPR-DFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 103 ~~~~yd~~t~~W~~--~~~~~--~~p~~r-~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
.+|++|+.+.+-.. ..... ..+... .........++.||+.-- ..+.+++|++..
T Consensus 139 ~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~dg~~lyv~d~-----~~~~I~~~~~~~ 198 (306)
T 2p4o_A 139 AIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-----EKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-----TTTEEEEEEBCT
T ss_pred eEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCcCCCEEEEEeC-----CCCEEEEEEeCC
Confidence 79999988653221 11100 011111 111112333447888643 245689999875
No 239
>1gen_A Gelatinase A; hydrolase, hemopexin domain, metalloprotease, hydrolase (metalloprotease); 2.15A {Homo sapiens} SCOP: b.66.1.1 PDB: 1rtg_A
Probab=69.31 E-value=62 Score=28.77 Aligned_cols=113 Identities=14% Similarity=0.226 Sum_probs=57.8
Q ss_pred EEEEECCcEEEEEcccCCCccCCceEEEEcCCC-cEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCC
Q 010770 24 SAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (501)
Q Consensus 24 ~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~ 100 (501)
+++.+. +.+|+|=| +.+|+++.... .......... -+.+|. .. -++... ++++|+|=|
T Consensus 35 Ai~~~~-g~~~fFkg-------~~~Wr~~~~~~~~~~P~~I~~~---wp~lp~-~I-DAA~~~~~~~k~yfFkG------ 95 (218)
T 1gen_A 35 GIAQIR-GEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KI-DAVYEAPQEEKAVFFAG------ 95 (218)
T ss_dssp EEEEET-TEEEEEET-------TEEEEESSTTSCCEEEEEGGGT---CTTSCS-CC-SEEEEETTTTEEEEEET------
T ss_pred EEEeCC-CcEEEEEC-------CEEEEEeCCCCccCCCEEHHHh---cCCCCC-Cc-cEEEEECCCCEEEEEeC------
Confidence 344454 78999977 45777766542 2222111110 011232 22 233332 578999966
Q ss_pred CCcEEEEECCCCe--E-EEEecCCCCCCcC-CccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 101 LGDFWVLDTDIWQ--W-SELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 101 ~~~~~~yd~~t~~--W-~~~~~~~~~p~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+.+|+|+..+.. + ..+... .+|... .-.++... .++++|+|-| +..|+||..+++
T Consensus 96 -~~yW~y~~~~~~~gyPk~I~~~-g~p~~~~~IDAAf~~~~~g~~YfFkG-------~~ywr~d~~~~~ 155 (218)
T 1gen_A 96 -NEYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKK 155 (218)
T ss_dssp -TEEEEEETTEECTTCSEEGGGG-TCCTTCCCCSEEEEETTTTEEEEEET-------TEEEEEETTTTE
T ss_pred -CEEEEEcCccccCCCCccHhhc-CCCCCcCCccEEEEEcCCCeEEEEEC-------CEEEEEECcccc
Confidence 468999853100 0 112111 233321 12233332 5679999977 458999987764
No 240
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=69.11 E-value=99 Score=31.05 Aligned_cols=173 Identities=8% Similarity=-0.035 Sum_probs=80.5
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.++ .+.++|.....-..+.. + .....+++...++..++.|+.++ .+..||.....-
T Consensus 314 ~~~~l~t~~~d~-----~i~~w~~~~~~~~~~~~----~-~~~v~~~~~s~~g~~l~~~~~dg-----~v~~~~~~~~~~ 378 (577)
T 2ymu_A 314 DGQTIASASDDK-----TVKLWNRNGQHLQTLTG----H-SSSVWGVAFSPDGQTIASASDDK-----TVKLWNRNGQLL 378 (577)
T ss_dssp TSSEEEEEETTS-----CEEEEETTSCEEEEECC----C-SSCEEEEEECTTSSEEEEEETTS-----EEEEEETTCCEE
T ss_pred CCCEEEEEeCCC-----eEEEEeCCCCeeEEEeC----C-CCCEEEEEECCCCCEEEEEeCCC-----EEEEEcCCCCEE
Confidence 455666665432 46777877665444431 1 11122334445667777776543 366777654443
Q ss_pred EEcccCCCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-e
Q 010770 166 MQLPVTGSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-G 243 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~ 243 (501)
..+. ....+. .+++.. +++.++.|+.. ..+..||.....-..+. .. ..... +++. -
T Consensus 379 ~~~~---~~~~~v--~~~~~s~dg~~l~~~~~d------------~~v~~~~~~~~~~~~~~---~~-~~~v~-~~~~s~ 436 (577)
T 2ymu_A 379 QTLT---GHSSSV--RGVAFSPDGQTIASASDD------------KTVKLWNRNGQLLQTLT---GH-SSSVW-GVAFSP 436 (577)
T ss_dssp EEEE---CCSSCE--EEEEECTTSSCEEEEETT------------SEEEEECTTCCEEEEEE---CC-SSCEE-EEEECT
T ss_pred EEec---CCCCCe--EEEEECCCCCEEEEEeCC------------CEEEEEeCCCCEEEEec---CC-CCCeE-EEEECC
Confidence 3332 111110 112222 45666666543 22445565443333333 11 11111 2222 3
Q ss_pred CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEE-CCEEEEEccCCC
Q 010770 244 GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (501)
Q Consensus 244 ~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 312 (501)
+++.++.++.+ ..+.+||.....-..+.... ....+++.. ++++++.|+.++
T Consensus 437 d~~~l~~~~~d------------~~v~~w~~~~~~~~~~~~~~-----~~v~~~~~spd~~~las~~~d~ 489 (577)
T 2ymu_A 437 DDQTIASASDD------------KTVKLWNRNGQLLQTLTGHS-----SSVRGVAFSPDGQTIASASDDK 489 (577)
T ss_dssp TSSEEEEEETT------------SEEEEEETTSCEEEEEECCS-----SCEEEEEECTTSCEEEEEETTS
T ss_pred CCCEEEEEcCC------------CEEEEEECCCCEEEEEcCCC-----CCEEEEEEcCCCCEEEEEeCCC
Confidence 45566666543 35777887655444443321 111222222 566777776554
No 241
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=68.39 E-value=63 Score=31.29 Aligned_cols=154 Identities=14% Similarity=0.230 Sum_probs=74.7
Q ss_pred EEEEeCCEEEEEccccCCCCCCcEEEEECCCCeE--EEEec-CCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEE
Q 010770 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTS-FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W--~~~~~-~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 156 (501)
+++.+++++|+|=| +-+|+++.....- ..+.. -..+|.. .. ++... .++++|+|-| +.+|
T Consensus 185 Av~~~~g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~wpgLP~~-iD-Aa~~~~~~g~~~fFkg-------~~yW 248 (365)
T 3ba0_A 185 AVTTVGNKIFFFKD-------RFFWLKVSERPKTSVNLISSLWPTLPSG-IE-AAYEIEARNQVFLFKD-------DKYW 248 (365)
T ss_dssp CEEEETTEEEEEET-------TEEEECCSSCCCCCEEEHHHHCSSCCSS-CC-EEEEEGGGTEEEEEET-------TEEE
T ss_pred eEEEcCCeEEEEeC-------CEEEEEcCCCccCCccchhhhccCCCCC-cc-EEEEecCCCEEEEEeC-------CEEE
Confidence 34557889999865 2456665433211 12211 1234532 22 23333 3669999977 3467
Q ss_pred EEECCCCc--e-EEcccCCCCCCC--CcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEE-----e
Q 010770 157 VLDTISLE--W-MQLPVTGSVPPP--RCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ-----L 225 (501)
Q Consensus 157 ~yd~~t~~--W-~~~~~~~~~p~~--r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~-----~ 225 (501)
+|+..+.. + ..+... .+|.. ....+.... ++++|+|-|. ..++||..+++-.. +
T Consensus 249 r~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG~--------------~yw~yd~~~~~v~~gyPk~I 313 (365)
T 3ba0_A 249 LISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVDN--------------QYWRYDERRQMMDPGYPKLI 313 (365)
T ss_dssp ECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEETT--------------EEEEEETTTTEECSSCCCCH
T ss_pred EEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEECC--------------EEEEEeCCcceecCCCCcch
Confidence 77643211 1 122211 12321 222222222 5799999762 23344544432110 1
Q ss_pred e--cCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 226 K--LPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 226 ~--~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
. .+| .|. ....+....++++|.|-| +..|+||..+.+-..
T Consensus 314 ~~~f~g-~p~-~iDaA~~~~~g~~YfFkg--------------~~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 314 TKNFQG-IGP-KIDAVFYSKNKYYYFFQG--------------SNQFEYDFLLQRITK 355 (365)
T ss_dssp HHHSTT-CCS-SCSEEEEETTTEEEEEET--------------TEEEEEETTTTEEEE
T ss_pred hhcCCC-CCC-ccceeeEecCCcEEEEeC--------------CEEEEEECCccEEec
Confidence 0 011 221 233333333788999876 457999988876655
No 242
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=67.99 E-value=93 Score=30.31 Aligned_cols=18 Identities=11% Similarity=0.084 Sum_probs=14.7
Q ss_pred CccEEEEEcCcEEEEEec
Q 010770 128 DFAAASAIGNRKIVMYGG 145 (501)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (501)
..|+++...++.+|..|-
T Consensus 182 ~~hs~alt~~G~v~~wG~ 199 (406)
T 4d9s_A 182 AEHTAAVTEDGDLYGWGW 199 (406)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEeCCCCEEEeeC
Confidence 457888888899999984
No 243
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=67.88 E-value=1.3e+02 Score=32.02 Aligned_cols=201 Identities=13% Similarity=0.024 Sum_probs=93.1
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCC-cEEeceecCCCCCCCCCCCCcceeEEEE-eCC-EEEEEccccCCCCCCcEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDC-HMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~-~iyv~GG~~~~~~~~~~~~ 106 (501)
+++.++|.-...+.....++++|+.++ +. +.. .. +......+. -++ .||.. ..........++.
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~--------~~--~~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~ 251 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD--------KV--SGTNGEIVWGPDHTSLFYV-TKDETLRENKVWR 251 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC--------CE--EEECSCCEECSSTTEEEEE-EECTTCCEEEEEE
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc--------cc--cCceeeEEEecCCCEEEEE-EECCCCCCCEEEE
Confidence 555555543333333346999999887 52 110 00 111111112 233 44443 2222222246888
Q ss_pred EECCCCeE--EEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCC--ce--EEcccCCCCCCCCc
Q 010770 107 LDTDIWQW--SELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL--EW--MQLPVTGSVPPPRC 179 (501)
Q Consensus 107 yd~~t~~W--~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~--~W--~~~~~~~~~p~~r~ 179 (501)
.++.+..- ..+.. .+............|+ .|++.... . ..+.++.+|+.+. .+ +.+... ...+
T Consensus 252 ~~lgt~~~~~~lv~~---~~~~~~~~~~~~SpDg~~l~~~~~~-~--~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~-- 321 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYE---EHNPLFSAFMYKAADTNTLCIGSQS-P--ETAEVHLLDLRKGNAHNTLEIVRPR--EKGV-- 321 (751)
T ss_dssp EETTSCGGGCEEEEE---CCCTTCEEEEEECTTSSEEEEEEEC-S--SCEEEEEEESSSCTTCCCEEESSCC--CTTC--
T ss_pred EECCCCchhcEEEEe---cCCCceEEEEEECCCCCEEEEEecC-C--CCceEEEEECCCCCCCceeEEeecC--CCCc--
Confidence 88776531 12211 1222233333334454 44444432 1 3567999999875 46 655411 1111
Q ss_pred ceeEE-EeCCEEEEEcccCCCCCcccccccccccccccCCC-CceEE-eecCCCCCCCceeeEEEEeCCEEEEEcCCCCC
Q 010770 180 GHTAT-MVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENET-PGWTQ-LKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (501)
Q Consensus 180 ~~~~~-~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t-~~W~~-~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~ 256 (501)
.++.. ..++.||+........ ...++.+|..+ ..|+. +-.. .....-......++.|++..-..
T Consensus 322 ~~s~~~~~g~~l~~~t~~~~a~--------~~~L~~~d~~~~~~~~~~li~~---~~~~~l~~~~~~~~~lv~~~~~~-- 388 (751)
T 2xe4_A 322 RYDVQMHGTSHLVILTNEGGAV--------NHKLLIAPRGQPSDWSHVLVDH---SEDVFMESIAVRSNYLVVAGRRA-- 388 (751)
T ss_dssp CEEEEEETTTEEEEEECTTTCT--------TCEEEEEETTSTTCCCCEEECC---CSSEEEEEEEECSSEEEEEEEET--
T ss_pred eEEEeeeeCCEEEEEeCCCCCC--------CcEEEEEcCCCcccceeeEECC---CCCcEEEEEEEECCEEEEEEEeC--
Confidence 12222 2267888886553111 12345557665 57876 4311 11112123334567777665332
Q ss_pred CCCcccccccCeEEEEEc
Q 010770 257 GWLSRYDIYYNDTIILDR 274 (501)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~ 274 (501)
....++++|+
T Consensus 389 --------g~~~l~~~dl 398 (751)
T 2xe4_A 389 --------GLTRIWTMMA 398 (751)
T ss_dssp --------TEEEEEEEEC
T ss_pred --------CEEEEEEEec
Confidence 2356888886
No 244
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=67.21 E-value=1.2e+02 Score=31.29 Aligned_cols=120 Identities=13% Similarity=0.109 Sum_probs=61.9
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWV 106 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~ 106 (501)
.++.||+.... +.++++|..++ .|+.-..... ...+.+.......++.++.||+.. ....+++
T Consensus 67 ~~g~vyv~~~~------~~v~AlD~~tG~~~W~~~~~~~~---~~~~~~~~~~~g~a~~~~~v~~~t------~dg~l~A 131 (582)
T 1flg_A 67 SDGVIYVTASY------SRLFALDAKTGKRLWTYNHRLPD---DIRPCCDVVNRGAAIYGDKVFFGT------LDASVVA 131 (582)
T ss_dssp ETTEEEEEETT------TEEEEEESSSCCEEEEEECCCCT---TCCCSSCSCCCCCEEETTEEEEEE------TTTEEEE
T ss_pred ECCEEEEEcCC------CCEEEEECCCCcEEEEEcCCCCc---ccccccccCCCccEEECCEEEEEe------CCCEEEE
Confidence 34889987663 23999999876 5876432110 000000001122345688888752 1246999
Q ss_pred EECCCCe--EEEEecCCCCCCcC--CccEEEEEcC---c--EEEEEecCCC-CcccccEEEEECCCCc--eEE
Q 010770 107 LDTDIWQ--WSELTSFGDLPSPR--DFAAASAIGN---R--KIVMYGGWDG-KKWLSDVYVLDTISLE--WMQ 167 (501)
Q Consensus 107 yd~~t~~--W~~~~~~~~~p~~r--~~~~~~~~~~---~--~iyv~GG~~~-~~~~~~~~~yd~~t~~--W~~ 167 (501)
+|..+++ |+.-.. .+... ...+.++.++ + .||+ |.... ......++.||..|.+ |+.
T Consensus 132 lD~~TG~~~W~~~~~---~~~~~~~~~~sP~v~~~~~~G~~~v~v-g~~~~e~~~~g~v~alD~~tG~~~W~~ 200 (582)
T 1flg_A 132 LNKNTGKVVWKKKFA---DHGAGYTMTGAPTIVKDGKTGKVLLIH-GSSGDEFGVVGRLFARDPDTGEEIWMR 200 (582)
T ss_dssp EESSSCCEEEEEECS---CGGGTCBCCSCCEEEECTTTCCEEEEE-CCBCGGGCCBCEEEEECTTTCCEEEEE
T ss_pred EECCCCCEEeeecCC---CCCcCcccccCCEEeCCCcCCcEEEEE-eccccccCCCCEEEEEECCCCCEEeec
Confidence 9998875 875432 11110 1112223322 1 4444 43211 1124568999998766 865
No 245
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=66.40 E-value=77 Score=30.65 Aligned_cols=154 Identities=13% Similarity=0.138 Sum_probs=75.8
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCcE--EeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCC
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLW--FQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRR 100 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W--~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~ 100 (501)
++.+. +.+|+|=| +.+|+++.....- ..+... -+.+|. .--++... ++++|+|-|
T Consensus 186 v~~~~-g~~~fFkg-------~~~Wr~~~~~~~~~p~~I~~~-----wpgLP~--~iDAa~~~~~~g~~~fFkg------ 244 (365)
T 3ba0_A 186 VTTVG-NKIFFFKD-------RFFWLKVSERPKTSVNLISSL-----WPTLPS--GIEAAYEIEARNQVFLFKD------ 244 (365)
T ss_dssp EEEET-TEEEEEET-------TEEEECCSSCCCCCEEEHHHH-----CSSCCS--SCCEEEEEGGGTEEEEEET------
T ss_pred EEEcC-CeEEEEeC-------CEEEEEcCCCccCCccchhhh-----ccCCCC--CccEEEEecCCCEEEEEeC------
Confidence 34454 78888877 4567776543221 111111 011231 12233333 789999966
Q ss_pred CCcEEEEECCCC--eE-EEEecCCCCCCcC-CccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEEcccC----
Q 010770 101 LGDFWVLDTDIW--QW-SELTSFGDLPSPR-DFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVT---- 171 (501)
Q Consensus 101 ~~~~~~yd~~t~--~W-~~~~~~~~~p~~r-~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~---- 171 (501)
+.+|+|+.... .+ ..+... .+|... .--++... .++++|+|-| +..|+||..+.+-..--+.
T Consensus 245 -~~yWr~~~~~~~~gyPk~I~~~-GlP~~~~~IDAA~~~~~~~~~yfFkG-------~~yw~yd~~~~~v~~gyPk~I~~ 315 (365)
T 3ba0_A 245 -DKYWLISNLRPEPNYPKSIHSF-GFPNFVKKIDAAVFNPRFYRTYFFVD-------NQYWRYDERRQMMDPGYPKLITK 315 (365)
T ss_dssp -TEEEECSTTSCTTTCSEETTTT-TCCTTCCCCCEEEEETTTTEEEEEET-------TEEEEEETTTTEECSSCCCCHHH
T ss_pred -CEEEEEcCCcccCCCCceeeec-cCCCCCCCcCEEEEeCCCCEEEEEEC-------CEEEEEeCCcceecCCCCcchhh
Confidence 35677764321 11 122211 244421 22233333 3579999977 4589999876542210000
Q ss_pred --CCCCCCCcceeEEEe-CCEEEEEcccCCCCCcccccccccccccccCCCCceEE
Q 010770 172 --GSVPPPRCGHTATMV-EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQ 224 (501)
Q Consensus 172 --~~~p~~r~~~~~~~~-~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~ 224 (501)
..+| .... ++... ++++|+|-|. ..++||..+.+-..
T Consensus 316 ~f~g~p-~~iD-aA~~~~~g~~YfFkg~--------------~ywr~d~~~~~v~~ 355 (365)
T 3ba0_A 316 NFQGIG-PKID-AVFYSKNKYYYFFQGS--------------NQFEYDFLLQRITK 355 (365)
T ss_dssp HSTTCC-SSCS-EEEEETTTEEEEEETT--------------EEEEEETTTTEEEE
T ss_pred cCCCCC-Cccc-eeeEecCCcEEEEeCC--------------EEEEEECCccEEec
Confidence 0112 1222 33334 7899998763 34456776665544
No 246
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=65.89 E-value=97 Score=29.77 Aligned_cols=150 Identities=13% Similarity=0.126 Sum_probs=78.4
Q ss_pred EEEEECCC--CeEEEEecCCCCCCcCCccEEEEEc--CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCC--
Q 010770 104 FWVLDTDI--WQWSELTSFGDLPSPRDFAAASAIG--NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPP-- 177 (501)
Q Consensus 104 ~~~yd~~t--~~W~~~~~~~~~p~~r~~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~-- 177 (501)
++.++... .+|..+.+ .+.....++++... ++.||+.+.... .-..+++.+-...+|+.+......+..
T Consensus 33 l~~~~~~~~g~~W~~~~~---~~~~~~v~~i~~dp~~~~~l~~g~~~g~--~g~gl~~s~D~G~tW~~~~~~~~~~~~~~ 107 (394)
T 3b7f_A 33 AWFLASDPARRTWELRGP---VFLGHTIHHIVQDPREPERMLMAARTGH--LGPTVFRSDDGGGNWTEATRPPAFNKAPE 107 (394)
T ss_dssp EEEEEECTTSCSEEEEEE---ESTTSEEEEEEECSSSTTCEEEEEEC----CCEEEEEESSTTSCCEECSBCCCCCCCC-
T ss_pred eEEEECCCCCCCceECCc---cCCCCceEEEEECCCCCCeEEEEecCCC--CCccEEEeCCCCCCceECCccccCCCccc
Confidence 67777655 68998742 12222234444433 457887654211 112477777778899998632111211
Q ss_pred C-----cce--eEEEe----CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCC--------------
Q 010770 178 R-----CGH--TATMV----EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAP-------------- 232 (501)
Q Consensus 178 r-----~~~--~~~~~----~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p-------------- 232 (501)
+ ... +++.. .+.||+.+.. ..+++.+....+|+.+......|
T Consensus 108 ~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~-------------ggl~~S~DgG~tW~~~~~~~~~p~~~~~~~~~~~g~~ 174 (394)
T 3b7f_A 108 GETGRVVDHVFWLTPGHASEPGTWYAGTSP-------------QGLFRSTDHGASWEPVAGFNDHPMRRAWTGGEQDGTP 174 (394)
T ss_dssp ---CCCCCEEEEEEECCTTSTTCEEEEEET-------------TEEEEESSTTSBCEECHHHHTCTTHHHHHCCC----C
T ss_pred ccccccccceeEEEeCCCCCCCEEEEEecC-------------CcEEEEcCCCCCeEECcCccCCccccccccccccCCC
Confidence 1 111 23332 4577775421 22344566778999875210111
Q ss_pred CCceeeEEEEe---CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEccc
Q 010770 233 SSRCGHTITSG---GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 233 ~~r~~~s~~~~---~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~ 284 (501)
....-+++++. .+.||+.... ..+++.+-...+|+.+..
T Consensus 175 ~~~~i~~i~~d~~~~~~l~vg~~~-------------ggl~~s~DgG~tW~~~~~ 216 (394)
T 3b7f_A 175 DGPKMHSILVDPRDPKHLYIGMSS-------------GGVFESTDAGTDWKPLNR 216 (394)
T ss_dssp CCCEEEEEEECTTCTTCEEEEEET-------------BEEEEESSTTSSCEECCT
T ss_pred CCCceeEEEECCCCCCEEEEEECC-------------CCEEEECCCCCCceECCC
Confidence 11223444443 3467764321 247888878889999864
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=64.17 E-value=87 Score=28.62 Aligned_cols=103 Identities=11% Similarity=0.136 Sum_probs=51.2
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEcCCC-cEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCc
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~ 103 (501)
+...++.||+... ...+++||+... .|.... +... ..+.+. .++.||+.. ..
T Consensus 143 ~~~~~g~l~vgt~------~~~l~~~d~~g~~~~~~~~-----------~~~~-~~~~~~d~~g~l~v~t--------~~ 196 (330)
T 3hxj_A 143 IVSEDGTIYVGSN------DNYLYAINPDGTEKWRFKT-----------NDAI-TSAASIGKDGTIYFGS--------DK 196 (330)
T ss_dssp EECTTSCEEEECT------TSEEEEECTTSCEEEEEEC-----------SSCC-CSCCEECTTCCEEEES--------SS
T ss_pred EEcCCCEEEEEcC------CCEEEEECCCCCEeEEEec-----------CCCc-eeeeEEcCCCEEEEEe--------CE
Confidence 3343466666321 135888998722 354421 1111 122333 366777654 46
Q ss_pred EEEEECCCC-eEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc-eE
Q 010770 104 FWVLDTDIW-QWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE-WM 166 (501)
Q Consensus 104 ~~~yd~~t~-~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-W~ 166 (501)
+++||.... .|..... . ....+.+...++.||+... ...+++||..... |.
T Consensus 197 l~~~d~~g~~~~~~~~~-----~-~~~~~~~~~~~g~l~v~t~------~~gl~~~~~~g~~~~~ 249 (330)
T 3hxj_A 197 VYAINPDGTEKWNFYAG-----Y-WTVTRPAISEDGTIYVTSL------DGHLYAINPDGTEKWR 249 (330)
T ss_dssp EEEECTTSCEEEEECCS-----S-CCCSCCEECTTSCEEEEET------TTEEEEECTTSCEEEE
T ss_pred EEEECCCCcEEEEEccC-----C-cceeceEECCCCeEEEEcC------CCeEEEECCCCCEeEE
Confidence 888984322 3544321 1 1123334445567877531 2348888865544 44
No 248
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=63.60 E-value=1.1e+02 Score=29.47 Aligned_cols=70 Identities=7% Similarity=0.094 Sum_probs=41.3
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++.+++.|+.+ ..+.+||+.+.+-...-. ..+....-.+++...++..++.|+.++ .+.+||+.+.+.
T Consensus 181 ~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~--~~~h~~~v~~~~~s~~~~~l~s~~~dg-----~i~iwd~~~~~~ 248 (437)
T 3gre_A 181 EKSLLVALTNL-----SRVIIFDIRTLERLQIIE--NSPRHGAVSSICIDEECCVLILGTTRG-----IIDIWDIRFNVL 248 (437)
T ss_dssp SCEEEEEEETT-----SEEEEEETTTCCEEEEEE--CCGGGCCEEEEEECTTSCEEEEEETTS-----CEEEEETTTTEE
T ss_pred CCCEEEEEeCC-----CeEEEEeCCCCeeeEEEc--cCCCCCceEEEEECCCCCEEEEEcCCC-----eEEEEEcCCccE
Confidence 35667776643 368899998876543321 111122223334445667888887654 488999988665
Q ss_pred EE
Q 010770 166 MQ 167 (501)
Q Consensus 166 ~~ 167 (501)
..
T Consensus 249 ~~ 250 (437)
T 3gre_A 249 IR 250 (437)
T ss_dssp EE
T ss_pred EE
Confidence 43
No 249
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=62.27 E-value=1.2e+02 Score=29.52 Aligned_cols=19 Identities=21% Similarity=0.258 Sum_probs=15.8
Q ss_pred cCcEEEEECCcEEEEEccc
Q 010770 21 SGHSAVNIGKSKVVVFGGL 39 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~ 39 (501)
..|++++..++.||.+|--
T Consensus 25 ~~hs~al~~~g~v~~wG~n 43 (406)
T 4d9s_A 25 ASHSVALLSGDIVCSWGRG 43 (406)
T ss_dssp SSEEEEEETTTEEEEEECC
T ss_pred CCeEEEEEeCCEEEEEeCC
Confidence 4688888888999999954
No 250
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=61.70 E-value=42 Score=35.36 Aligned_cols=18 Identities=0% Similarity=-0.071 Sum_probs=13.9
Q ss_pred CeEEEEEcCCCceEEccc
Q 010770 267 NDTIILDRLSAQWKRLPI 284 (501)
Q Consensus 267 ~~v~~yd~~~~~W~~v~~ 284 (501)
..+|.+|+.+.....+..
T Consensus 337 ~~l~~~~~~~~~~~~lt~ 354 (719)
T 1z68_A 337 KHIHYIKDTVENAIQITS 354 (719)
T ss_dssp EEEEEESSCSTTCEECSC
T ss_pred eEEEEEECCCCceEeccc
Confidence 569999998887766654
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=61.07 E-value=1.6e+02 Score=30.57 Aligned_cols=73 Identities=10% Similarity=0.112 Sum_probs=40.2
Q ss_pred EEEEcccCCCccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECC
Q 010770 33 VVVFGGLVDKRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTD 110 (501)
Q Consensus 33 iyv~GG~~~~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 110 (501)
||+... ...++.+|..++ .|+.-... ..+......+-++.++.||+-.+..+......++.||..
T Consensus 124 V~v~t~------dg~l~AlDa~TG~~~W~~~~~~-------~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~ 190 (599)
T 1w6s_A 124 ILKTQL------DGNVAALNAETGETVWKVENSD-------IKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVK 190 (599)
T ss_dssp EEEECT------TSEEEEEETTTCCEEEEEECCC-------GGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETT
T ss_pred EEEEcC------CCEEEEEECCCCCEEEeecCCC-------CCccceeecCCEEECCEEEEEecccccCCCCeEEEEECC
Confidence 777533 245899998877 57753211 000001122234568888765432211234579999998
Q ss_pred CCe--EEEEe
Q 010770 111 IWQ--WSELT 118 (501)
Q Consensus 111 t~~--W~~~~ 118 (501)
+.+ |+.-.
T Consensus 191 TG~~~W~~~~ 200 (599)
T 1w6s_A 191 TGEQVWRAYA 200 (599)
T ss_dssp TCCEEEEEES
T ss_pred CCcEEEEEcC
Confidence 875 77653
No 252
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=60.51 E-value=1e+02 Score=32.47 Aligned_cols=119 Identities=14% Similarity=0.076 Sum_probs=62.8
Q ss_pred CcEEEEEecCCCCcccccEEEEECCCCc--eEEcccCCCC--C---CCCcceeEEEeCCEEEEEcccCCCCCcccccccc
Q 010770 137 NRKIVMYGGWDGKKWLSDVYVLDTISLE--WMQLPVTGSV--P---PPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWAL 209 (501)
Q Consensus 137 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~~~~--p---~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l 209 (501)
++.||+... ...++.+|..|.+ |+.-...... . ......+.++.++++|+....
T Consensus 66 ~g~vyv~~~------~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~d------------- 126 (668)
T 1kv9_A 66 DGVIYTSMS------WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLD------------- 126 (668)
T ss_dssp TTEEEEEEG------GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTT-------------
T ss_pred CCEEEEECC------CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCC-------------
Confidence 569999764 3458999988765 8864311000 0 001122345568888875421
Q ss_pred cccccccCCCC--ceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc--eEEc
Q 010770 210 KGLIEEENETP--GWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ--WKRL 282 (501)
Q Consensus 210 ~~~~~Yd~~t~--~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~--W~~v 282 (501)
..++.+|..+. .|+.-... .........+.++.++.+|+-.+.... .....++.||..+.+ |+.-
T Consensus 127 g~l~alD~~tG~~~W~~~~~~-~~~~~~~~~~P~v~~~~v~vg~~~~~~-------~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 127 GRLIALDAKTGKAIWSQQTTD-PAKPYSITGAPRVVKGKVIIGNGGAEY-------GVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp SEEEEEETTTCCEEEEEECSC-TTSSCBCCSCCEEETTEEEECCBCTTT-------CCBCEEEEEETTTCCEEEEEE
T ss_pred CEEEEEECCCCCEeeeeccCC-CCCcceecCCCEEECCEEEEeCCCCCc-------CCCCEEEEEECCCCcEEEEec
Confidence 23445587665 47754311 111111222334567887764322110 123579999988754 7753
No 253
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=60.45 E-value=1.6e+02 Score=30.27 Aligned_cols=73 Identities=10% Similarity=0.013 Sum_probs=42.0
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC---CCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL---PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~---p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
++.+++.|+.++ .+.++|..+++....-..... .....-.+++...++..++.|+.++ .+.++|+.+
T Consensus 201 dg~~las~s~D~-----~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~-----~v~lWd~~~ 270 (611)
T 1nr0_A 201 DGSLFASTGGDG-----TIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK-----TIKIWNVAT 270 (611)
T ss_dssp TSSEEEEEETTS-----CEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS-----EEEEEETTT
T ss_pred CCCEEEEEECCC-----cEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC-----eEEEEeCCC
Confidence 567777777543 578889887765433210000 1111122333445667778887653 478899988
Q ss_pred CceEEc
Q 010770 163 LEWMQL 168 (501)
Q Consensus 163 ~~W~~~ 168 (501)
.+....
T Consensus 271 ~~~~~~ 276 (611)
T 1nr0_A 271 LKVEKT 276 (611)
T ss_dssp TEEEEE
T ss_pred Cceeee
Confidence 776543
No 254
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=60.21 E-value=74 Score=29.35 Aligned_cols=56 Identities=7% Similarity=0.134 Sum_probs=31.5
Q ss_pred eeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecC
Q 010770 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGW 146 (501)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~ 146 (501)
.|+++..++.+|.+|--.....-.. .........+.. -..|+++. .++.+|..|--
T Consensus 151 ~~~~~l~~G~v~~wG~n~~gqlg~p----~~~~~~v~~i~~-------G~~hs~al-~~G~v~~wG~n 206 (282)
T 3qhy_B 151 YTALAVKNGGVIAWGDNYFGQTTVP----AEAQSGVDDVAG-------GIFHSLAL-KDGKVIAWGDN 206 (282)
T ss_dssp SEEEEEETTEEEEEECCTTSTTSCC----GGGGSSEEEEEE-------CSSEEEEE-ETTEEEEEECC
T ss_pred CEEEEEECCEEEEecCCCCCCCCCc----eecCCCeEEEEe-------cCCEEEEE-ECCeEEEEECC
Confidence 4666666889999986432221000 000123444432 23577777 78899999854
No 255
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=59.24 E-value=1.1e+02 Score=28.15 Aligned_cols=66 Identities=9% Similarity=-0.031 Sum_probs=37.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCce
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEW 165 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W 165 (501)
++..++.|+.+ ..+.++|+.+++-...-. . ....-.+++...++.+++.|+.++. +.+||+....-
T Consensus 76 dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~---~-h~~~v~~~~~~~~~~~l~s~s~D~~-----i~vwd~~~~~~ 141 (319)
T 3frx_A 76 DGAYALSASWD-----KTLRLWDVATGETYQRFV---G-HKSDVMSVDIDKKASMIISGSRDKT-----IKVWTIKGQCL 141 (319)
T ss_dssp TSSEEEEEETT-----SEEEEEETTTTEEEEEEE---C-CSSCEEEEEECTTSCEEEEEETTSC-----EEEEETTSCEE
T ss_pred CCCEEEEEeCC-----CEEEEEECCCCCeeEEEc---c-CCCcEEEEEEcCCCCEEEEEeCCCe-----EEEEECCCCeE
Confidence 55666777644 358889998876433221 1 1111223333456678888886543 67778765443
No 256
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=59.10 E-value=99 Score=27.57 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=50.8
Q ss_pred eCCEEEEEccccCCCCCCcEEEEECCC----CeEEEEe----c-CCCCCCc----CCccEEEEE-cCcEEEEEecCCCCc
Q 010770 85 IDCHMFIFGGRFGSRRLGDFWVLDTDI----WQWSELT----S-FGDLPSP----RDFAAASAI-GNRKIVMYGGWDGKK 150 (501)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~~~yd~~t----~~W~~~~----~-~~~~p~~----r~~~~~~~~-~~~~iyv~GG~~~~~ 150 (501)
.++++|+|=| +.+|+||..+ .....-+ . -..+|.. ... ++... .++++|+|-|
T Consensus 69 ~~g~~~fFkg-------~~~W~~d~~~~t~~~~~~~gP~~I~~~wp~LP~~~~~~~ID-AA~~~~~~gk~yfFkG----- 135 (225)
T 3oyo_A 69 EASEAYVFSG-------NHSAYIDYAPGTTNDKILVGPTTIAEMFPVLNNTVFEDSID-SAFRSTKGKEVYLFKG----- 135 (225)
T ss_dssp STTEEEEEET-------TEEEEEECCTTSSCCEEEEEEEEHHHHCGGGTTSTTTSCCC-EEEECSSTTEEEEEET-----
T ss_pred CCCeEEEEcC-------CEEEEEecccccCCCceecCchhhhhcCCCCCCcccccccc-eEEEECCCCcEEEEeC-----
Confidence 5789999976 4689997632 2222111 0 1123331 122 22222 4679999987
Q ss_pred ccccEEEEECCCCceEEcc--cCCCCCC------CCcceeEEE--eCCEEEEEccc
Q 010770 151 WLSDVYVLDTISLEWMQLP--VTGSVPP------PRCGHTATM--VEKRLLIYGGR 196 (501)
Q Consensus 151 ~~~~~~~yd~~t~~W~~~~--~~~~~p~------~r~~~~~~~--~~~~lyv~GG~ 196 (501)
+..|+||..+.+...-+ .....|. +..-.++.. .++++|+|-|.
T Consensus 136 --~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG~ 189 (225)
T 3oyo_A 136 --NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKGQ 189 (225)
T ss_dssp --TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEETT
T ss_pred --CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEECC
Confidence 45899997766554310 0001111 221223333 37899999873
No 257
>3c7x_A Matrix metalloproteinase-14; membrane protein interaction, Pro-MMP-2, TIMP-2, metastasis, calcium, cleavage on PAIR of basic residues, hydrolase; 1.70A {Homo sapiens}
Probab=58.86 E-value=91 Score=27.09 Aligned_cols=112 Identities=15% Similarity=0.128 Sum_probs=57.4
Q ss_pred EEEECCcEEEEEcccCCCccCCceEEEEcCCCc---EEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCC
Q 010770 25 AVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL---WFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRL 101 (501)
Q Consensus 25 ~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~---W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~ 101 (501)
++.+. +.+|+|-| +.+|+++..... =..+... -+.+|. ....+....++++|+|-|
T Consensus 11 ~~~~~-g~~~fFkg-------~~~w~~~~~~~~~gyP~~I~~~-----w~glP~-~iDAa~~~~~g~~yfFkg------- 69 (196)
T 3c7x_A 11 VAMLR-GEMFVFKE-------RWFWRVRNNQVMDGYPMPIGQF-----WRGLPA-SINTAYERKDGKFVFFKG------- 69 (196)
T ss_dssp EEEET-TEEEEEET-------TEEEEEETTEECTTCSEEHHHH-----STTCCS-SCCEEEECTTSCEEEEET-------
T ss_pred EEEcC-CEEEEEEC-------CEEEEEECCccCCCCceEhhHh-----ccCCCC-CccEEEEeCCCcEEEecC-------
Confidence 34455 78999987 568888643110 0111111 011232 222222224678999966
Q ss_pred CcEEEEECCCCe---EEEEecC-CCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 102 GDFWVLDTDIWQ---WSELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 102 ~~~~~yd~~t~~---W~~~~~~-~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+.+|+|+..+.. =..+... ..+|......+.....++++|+|-| +..|+||..+++
T Consensus 70 ~~yw~~~~~~~~~gyPk~I~~~~~glP~~~IDAA~~~~~~g~~yfFkG-------~~yw~yd~~~~~ 129 (196)
T 3c7x_A 70 DKHWVFDEASLEPGYPKHIKELGRGLPTDKIDAALFWMPNGKTYFFRG-------NKYYRFNEELRA 129 (196)
T ss_dssp TEEEEEETTEECTTCSEEGGGTCBSCCSSCCSEEEEETTTTEEEEEET-------TEEEEEETTTTE
T ss_pred CEEEEEeCCcccCCCCeEhhhcCCCCCCCcccEEEEEccCCEEEEEEC-------CEEEEEeCCccc
Confidence 457888854211 0122221 1244333333222234679999977 358999987654
No 258
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=57.79 E-value=1.4e+02 Score=29.00 Aligned_cols=18 Identities=28% Similarity=0.525 Sum_probs=15.0
Q ss_pred cCcEEEEECCcEEEEEcc
Q 010770 21 SGHSAVNIGKSKVVVFGG 38 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG 38 (501)
..|++++..++.||.+|-
T Consensus 136 ~~hs~al~~~G~v~~wG~ 153 (423)
T 3mvd_K 136 DSHSACLLEDGRVFAWGS 153 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEEeC
Confidence 358888888899999994
No 259
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=57.58 E-value=1.4e+02 Score=28.79 Aligned_cols=18 Identities=11% Similarity=0.196 Sum_probs=14.9
Q ss_pred CccEEEEEcCcEEEEEec
Q 010770 128 DFAAASAIGNRKIVMYGG 145 (501)
Q Consensus 128 ~~~~~~~~~~~~iyv~GG 145 (501)
..|+++...++.+|..|-
T Consensus 168 ~~hs~alt~~G~v~~wG~ 185 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGK 185 (389)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred cCeEEEEeCCCeEEEeCC
Confidence 468888888889999984
No 260
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=56.78 E-value=1.4e+02 Score=28.70 Aligned_cols=19 Identities=16% Similarity=0.216 Sum_probs=15.3
Q ss_pred cCcEEEEECCcEEEEEccc
Q 010770 21 SGHSAVNIGKSKVVVFGGL 39 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~ 39 (501)
..|++++..++.||.+|--
T Consensus 116 ~~h~~al~~~G~v~~wG~n 134 (389)
T 3kci_A 116 GKHCLALSSEGEVYSWGEA 134 (389)
T ss_dssp CSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEcCCCCEEEEeCC
Confidence 3588888888999999853
No 261
>3oyo_A Hemopexin fold protein CP4; seeds, plant protein; 2.10A {Vigna unguiculata}
Probab=56.15 E-value=50 Score=29.54 Aligned_cols=63 Identities=14% Similarity=0.197 Sum_probs=39.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEec--CCCCCC------cCCccEEEEE-cCcEEEEEecCCCCcccccEE
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS--FGDLPS------PRDFAAASAI-GNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~p~------~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~ 156 (501)
++++|+|-| +.+|+||..+++...-+. ....|. +..-.++... .++++|+|-| +..|
T Consensus 127 ~gk~yfFkG-------~~yw~~d~~~~~~~~gPk~I~~~fpg~~~~~f~~~iDAAf~~~~~g~~YfFkG-------~~yw 192 (225)
T 3oyo_A 127 GKEVYLFKG-------NKYVRIAYDSKQLVGNIRNIGDGFPVLNGTEFESGIDACFASHKEPEAYLFKG-------QNYV 192 (225)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEEEEEEEEHHHHCGGGTTSTTTTCCSEEEECSSTTEEEEEET-------TEEE
T ss_pred CCcEEEEeC-------CeEEEEECCCCeecCCCcchhhcCCCcccccCCCCcCEEEEeCCCCEEEEEEC-------CEEE
Confidence 679999977 468999987776554210 001222 1222233333 5779999977 3589
Q ss_pred EEECCC
Q 010770 157 VLDTIS 162 (501)
Q Consensus 157 ~yd~~t 162 (501)
+||..+
T Consensus 193 r~d~~~ 198 (225)
T 3oyo_A 193 RIDFTP 198 (225)
T ss_dssp EEECCT
T ss_pred EEeCCc
Confidence 999873
No 262
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=55.72 E-value=1.4e+02 Score=31.09 Aligned_cols=109 Identities=8% Similarity=0.012 Sum_probs=58.1
Q ss_pred ceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCC----CCCCcEEEEECCCCeEEEEecCCC
Q 010770 47 DVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGS----RRLGDFWVLDTDIWQWSELTSFGD 122 (501)
Q Consensus 47 ~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~----~~~~~~~~yd~~t~~W~~~~~~~~ 122 (501)
.++++|+.+++-..+..... .........+.+-+++.++++..... .....++++|+.+++-..+.....
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~------~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~ 111 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKK------IESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEV 111 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTT------TTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTC
T ss_pred CEEEEECCCCcEEEEecccc------ccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCcc
Confidence 68999998887655432110 00001222233335665555543321 224689999999887655543111
Q ss_pred CCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcc
Q 010770 123 LPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLP 169 (501)
Q Consensus 123 ~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~ 169 (501)
.... ....+...|++.++++.. ..++++|..+.+-..+.
T Consensus 112 -~~~~-~~~~~~SPdG~~la~~~~------~~i~~~~~~~g~~~~~~ 150 (723)
T 1xfd_A 112 -SNAK-LQYAGWGPKGQQLIFIFE------NNIYYCAHVGKQAIRVV 150 (723)
T ss_dssp -CSCC-CSBCCBCSSTTCEEEEET------TEEEEESSSSSCCEEEE
T ss_pred -cccc-ccccEECCCCCEEEEEEC------CeEEEEECCCCceEEEe
Confidence 0000 112233345555555442 36899999888777665
No 263
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=55.18 E-value=1.7e+02 Score=29.09 Aligned_cols=19 Identities=21% Similarity=0.088 Sum_probs=15.7
Q ss_pred cCcEEEEECCcEEEEEccc
Q 010770 21 SGHSAVNIGKSKVVVFGGL 39 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~ 39 (501)
..|++++..++.||.+|--
T Consensus 76 ~~Ht~alt~~G~v~~wG~n 94 (473)
T 3of7_A 76 GMHTLALDEESNVWSWGCN 94 (473)
T ss_dssp SSEEEEEETTCCEEEEECC
T ss_pred CCeEEEEecCCeEEEeECC
Confidence 4688888888999999953
No 264
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=54.17 E-value=1.6e+02 Score=28.53 Aligned_cols=18 Identities=22% Similarity=0.499 Sum_probs=15.1
Q ss_pred cCcEEEEECCcEEEEEcc
Q 010770 21 SGHSAVNIGKSKVVVFGG 38 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG 38 (501)
..|++++..++.||.+|-
T Consensus 120 ~~hs~alt~~G~v~~wG~ 137 (413)
T 1a12_A 120 DSHTAALTDDGRVFLWGS 137 (413)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEcCCCcEEEeeC
Confidence 358888888899999995
No 265
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=53.95 E-value=1.5e+02 Score=28.02 Aligned_cols=78 Identities=9% Similarity=-0.060 Sum_probs=43.1
Q ss_pred EEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCC
Q 010770 83 VAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTIS 162 (501)
Q Consensus 83 ~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t 162 (501)
..-++..++.++.++.. ...++.+|.............-......-.+++.-.++++++.|+.++ .+.+||..+
T Consensus 227 fspdg~~l~~~s~d~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~-----~V~iwd~~~ 300 (365)
T 4h5i_A 227 FIADDTVLIAASLKKGK-GIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDN-----SIALVKLKD 300 (365)
T ss_dssp EEETTEEEEEEEESSSC-CEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTS-----CEEEEETTT
T ss_pred EcCCCCEEEEEecCCcc-eeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCC-----EEEEEECCC
Confidence 33477777777654422 224666777666554332100000111122344446778888888654 488999988
Q ss_pred CceE
Q 010770 163 LEWM 166 (501)
Q Consensus 163 ~~W~ 166 (501)
.+-.
T Consensus 301 ~~~~ 304 (365)
T 4h5i_A 301 LSMS 304 (365)
T ss_dssp TEEE
T ss_pred CcEE
Confidence 7643
No 266
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=53.48 E-value=1.5e+02 Score=28.00 Aligned_cols=67 Identities=18% Similarity=0.136 Sum_probs=39.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCC-e-EEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIW-Q-WSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~-~-W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
++.+++.|+.++ .+.+||+... . -..+. . ....-.+++...++..++.|+.++. +.+||+.+.
T Consensus 217 ~~~~l~sgs~D~-----~v~~wd~~~~~~~~~~~~----~-h~~~v~~v~~~p~~~~l~s~s~D~~-----i~lwd~~~~ 281 (380)
T 3iz6_a 217 NANMFISGSCDT-----TVRLWDLRITSRAVRTYH----G-HEGDINSVKFFPDGQRFGTGSDDGT-----CRLFDMRTG 281 (380)
T ss_dssp SCCEEEEEETTS-----CEEEEETTTTCCCCEEEC----C-CSSCCCEEEECTTSSEEEEECSSSC-----EEEEETTTT
T ss_pred CCCEEEEEECCC-----eEEEEECCCCCcceEEEC----C-cCCCeEEEEEecCCCeEEEEcCCCe-----EEEEECCCC
Confidence 567888887553 5778887632 1 12221 0 1111234444556678888886543 788898887
Q ss_pred ceEE
Q 010770 164 EWMQ 167 (501)
Q Consensus 164 ~W~~ 167 (501)
+-..
T Consensus 282 ~~~~ 285 (380)
T 3iz6_a 282 HQLQ 285 (380)
T ss_dssp EEEE
T ss_pred cEEE
Confidence 6444
No 267
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=51.05 E-value=2.5e+02 Score=29.80 Aligned_cols=164 Identities=9% Similarity=-0.002 Sum_probs=75.8
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCC-eEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
+++.++|+-...+.....+++.|+.++ +. ++. .++ ....+.+...|+ .|++. -.+.......++..++.+.
T Consensus 185 DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~--l~~--~~~--~~~~~~~WspDg~~l~y~-~~d~~~~~~~v~~~~lgt~ 257 (751)
T 2xe4_A 185 EHDLVAFSVDMSGNEVYTIEFKRISDPSQT--IAD--KVS--GTNGEIVWGPDHTSLFYV-TKDETLRENKVWRHVMGKL 257 (751)
T ss_dssp TTCEEEEEEESSSSSCEEEEEEETTCTTCC--CCC--CEE--EECSCCEECSSTTEEEEE-EECTTCCEEEEEEEETTSC
T ss_pred CCCEEEEEEeCCCCceEEEEEEECCCCCEe--CCc--ccc--CceeeEEEecCCCEEEEE-EECCCCCCCEEEEEECCCC
Confidence 555555543222222346999999887 52 110 111 111223333344 44443 2322222356888888775
Q ss_pred ceE--EcccCCCCCCCCcceeEEEe-CC-EEEEEcccCCCCCcccccccccccccccCCCC--ce--EEeecCCCCCCCc
Q 010770 164 EWM--QLPVTGSVPPPRCGHTATMV-EK-RLLIYGGRGGGGPIMGDLWALKGLIEEENETP--GW--TQLKLPGQAPSSR 235 (501)
Q Consensus 164 ~W~--~~~~~~~~p~~r~~~~~~~~-~~-~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~--~W--~~~~~~g~~p~~r 235 (501)
.-. .+- ..+........... ++ .|++...... . +.++.+|+.+. .+ +.+... ...+
T Consensus 258 ~~~~~lv~---~~~~~~~~~~~~~SpDg~~l~~~~~~~~----~------~~l~~~d~~~~~~~~~~~~l~~~--~~~~- 321 (751)
T 2xe4_A 258 QSEDVCLY---EEHNPLFSAFMYKAADTNTLCIGSQSPE----T------AEVHLLDLRKGNAHNTLEIVRPR--EKGV- 321 (751)
T ss_dssp GGGCEEEE---ECCCTTCEEEEEECTTSSEEEEEEECSS----C------EEEEEEESSSCTTCCCEEESSCC--CTTC-
T ss_pred chhcEEEE---ecCCCceEEEEEECCCCCEEEEEecCCC----C------ceEEEEECCCCCCCceeEEeecC--CCCc-
Confidence 421 221 00111222222222 34 5555543221 1 34455577664 46 555411 1111
Q ss_pred eeeEEE-EeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCC-CceEE
Q 010770 236 CGHTIT-SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLS-AQWKR 281 (501)
Q Consensus 236 ~~~s~~-~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~ 281 (501)
.++.. ..++.||+....+.. ....++++|..+ ..|..
T Consensus 322 -~~s~~~~~g~~l~~~t~~~~a--------~~~~L~~~d~~~~~~~~~ 360 (751)
T 2xe4_A 322 -RYDVQMHGTSHLVILTNEGGA--------VNHKLLIAPRGQPSDWSH 360 (751)
T ss_dssp -CEEEEEETTTEEEEEECTTTC--------TTCEEEEEETTSTTCCCC
T ss_pred -eEEEeeeeCCEEEEEeCCCCC--------CCcEEEEEcCCCccccee
Confidence 12222 247788887654311 235799999876 67876
No 268
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=50.73 E-value=1.7e+02 Score=27.86 Aligned_cols=229 Identities=7% Similarity=0.014 Sum_probs=0.0
Q ss_pred cEEEEECCcEEEEEcccCCCccCCceEEEEcCCCc------------EEeceecCCCCCCCCCCC------------Ccc
Q 010770 23 HSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKL------------WFQPECTGNGSNGQVGPG------------PRA 78 (501)
Q Consensus 23 h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~------------W~~l~~~~~~~~~~~~p~------------~R~ 78 (501)
.++....++.+++.|+.++. +.+||..+.. ...+. ... ...
T Consensus 32 ~~v~~s~~g~~la~g~~dg~-----v~iw~~~~~~~~~~~~~~~~~~~~~~~----------~h~~~~~~~~~~~~~~~V 96 (447)
T 3dw8_B 32 STVEFNHSGELLATGDKGGR-----VVIFQQEQENKIQSHSRGEYNVYSTFQ----------SHEPEFDYLKSLEIEEKI 96 (447)
T ss_dssp EEEEECSSSSEEEEEETTSE-----EEEEEECC-----CCCCCCEEEEEEEE----------CCCCEEEGGGTEEECCCC
T ss_pred EEEEECCCCCEEEEEcCCCe-----EEEEEecCCCCCCcccccceeEecccc----------cccccccccccccccCce
Q ss_pred eeEEEEeCC--EEEEEccccCCCCCCcEEEEECCCCeEE----------------------------------------E
Q 010770 79 FHIAVAIDC--HMFIFGGRFGSRRLGDFWVLDTDIWQWS----------------------------------------E 116 (501)
Q Consensus 79 ~h~~~~~~~--~iyv~GG~~~~~~~~~~~~yd~~t~~W~----------------------------------------~ 116 (501)
...+..-++ ..++.|+.++. +.+||..+..-. .
T Consensus 97 ~~l~~~~~~~~~~l~s~s~d~~-----i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (447)
T 3dw8_B 97 NKIRWLPQKNAAQFLLSTNDKT-----IKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRI 171 (447)
T ss_dssp CEEEECCCCSSSEEEEEECSSC-----EEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEE
T ss_pred EEEEEcCCCCcceEEEeCCCCe-----EEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEE
Q ss_pred EecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC--CCceEEcccCCCCCCCCcceeEEEe------CC
Q 010770 117 LTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI--SLEWMQLPVTGSVPPPRCGHTATMV------EK 188 (501)
Q Consensus 117 ~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~--t~~W~~~~~~~~~p~~r~~~~~~~~------~~ 188 (501)
.. ......-.+++...++.+++.| .++. +.+||+. ...+..+. ..+....+|...+. ++
T Consensus 172 ~~----~~h~~~v~~~~~~~~~~~l~s~-~d~~-----i~iwd~~~~~~~~~~~~---~~~~~~~~~~~~v~~~~~~p~~ 238 (447)
T 3dw8_B 172 FA----NAHTYHINSISINSDYETYLSA-DDLR-----INLWHLEITDRSFNIVD---IKPANMEELTEVITAAEFHPNS 238 (447)
T ss_dssp EC----SCCSSCCCEEEECTTSSEEEEE-CSSE-----EEEEETTEEEEEEEEEE---CCCSSGGGCCCCEEEEEECSSC
T ss_pred ec----cCCCcceEEEEEcCCCCEEEEe-CCCe-----EEEEECCCCCceeeeee---cccccccccCcceEEEEECCCC
Q ss_pred -EEEEEcccCCCCCcccccccccccccccCCCCce----EEeecCCCCCCC------------ceeeEEEEeCCEEEEEc
Q 010770 189 -RLLIYGGRGGGGPIMGDLWALKGLIEEENETPGW----TQLKLPGQAPSS------------RCGHTITSGGHYLLLFG 251 (501)
Q Consensus 189 -~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W----~~~~~~g~~p~~------------r~~~s~~~~~~~i~v~G 251 (501)
.+++.|+.. ..+..||+.+... ...- ..+.. .....+..-++.+++.|
T Consensus 239 ~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~ 303 (447)
T 3dw8_B 239 CNTFVYSSSK------------GTIRLCDMRASALCDRHSKLF---EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTR 303 (447)
T ss_dssp TTEEEEEETT------------SCEEEEETTTCSSSCTTCEEE---CCC-----CCHHHHHTTCEEEEEECTTSSEEEEE
T ss_pred CcEEEEEeCC------------CeEEEEECcCCccccceeeEe---ccCCCccccccccccCceEEEEEECCCCCEEEEe
Q ss_pred CCCCCCCCcccccccCeEEEEEcCC-CceEEcccCCCCCCcccce------------EEEEECCEEEEEccCCC
Q 010770 252 GHGTGGWLSRYDIYYNDTIILDRLS-AQWKRLPIGNEPPPARAYH------------SMTCLGSLYLLFGGFDG 312 (501)
Q Consensus 252 G~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~v~~~~~~p~~r~~~------------~~~~~~~~iyv~GG~~~ 312 (501)
+ . ..+.+||+.+ ..-...-............ .+..-++..++.|+.++
T Consensus 304 ~------------~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg 364 (447)
T 3dw8_B 304 D------------Y-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN 364 (447)
T ss_dssp E------------S-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT
T ss_pred e------------C-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=49.90 E-value=1.8e+02 Score=27.73 Aligned_cols=147 Identities=12% Similarity=0.083 Sum_probs=71.7
Q ss_pred EEEEcCcEEEEEecCCCCcccccEEEEECCCCc---eEEcccCCCCCCCCcceeE-EEe--CCEEEEEcccCCCCCcccc
Q 010770 132 ASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLE---WMQLPVTGSVPPPRCGHTA-TMV--EKRLLIYGGRGGGGPIMGD 205 (501)
Q Consensus 132 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~p~~r~~~~~-~~~--~~~lyv~GG~~~~~~~~~d 205 (501)
+++-.+|.+||.+.... ..++++++.... |-.-. +....+.+... +.. ++.|++..+ .
T Consensus 142 vavD~~GnaYVt~s~~~----~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~-~-------- 205 (334)
T 2p9w_A 142 SAQDRDGNSYVAFALGM----PAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG-P-------- 205 (334)
T ss_dssp EEECTTSCEEEEEEESS----CEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS-S--------
T ss_pred eEECCCCCEEEeCCCCC----CeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC-C--------
Confidence 44446689999766431 458999987553 43211 22334555544 444 346777765 2
Q ss_pred cccccccccccCCCCceEEeecC--CCC-CCCc-eeeEEEEeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEE
Q 010770 206 LWALKGLIEEENETPGWTQLKLP--GQA-PSSR-CGHTITSGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKR 281 (501)
Q Consensus 206 ~~~l~~~~~Yd~~t~~W~~~~~~--g~~-p~~r-~~~s~~~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~ 281 (501)
..+..+|+.+.....++.. |.. .... .+-...-.+++++++.-. .+.++++--..+ |+.
T Consensus 206 ----g~L~~fD~~~pv~~~v~~~~~G~~~~~~~~dgilp~~~~G~vllV~~~------------~~~~~~l~S~Dg-W~s 268 (334)
T 2p9w_A 206 ----RALTAFDVSKPYAWPEPVKINGDFGTLSGTEKIVTVPVGNESVLVGAR------------APYAISFRSWDN-WKS 268 (334)
T ss_dssp ----SSEEEEECSSSSCCCEECEESSCCCCCTTEEEEEEEEETTEEEEEEEE------------TTEEEEEECSST-TSE
T ss_pred ----CeEEEEcCCCCcceeecccccCCcccccCcccccccccCCEEEEEEcC------------CCCEEEEECCCC-cce
Confidence 1233446553322122211 211 1111 111122267877555431 133455554444 876
Q ss_pred cccCCCCCC---cccceEEEE----ECCEEEEEccCC
Q 010770 282 LPIGNEPPP---ARAYHSMTC----LGSLYLLFGGFD 311 (501)
Q Consensus 282 v~~~~~~p~---~r~~~~~~~----~~~~iyv~GG~~ 311 (501)
.......|. ++...+.++ .+++||++.+.-
T Consensus 269 a~~~g~~~~~~~~~g~tt~t~~~~~~~~~iYvv~~~f 305 (334)
T 2p9w_A 269 ANIKKTKRSELQNSGFTAVADYYQGSEQGLYAVSAFF 305 (334)
T ss_dssp EEEEEEECGGGGSSCEEEEEEEEETTEEEEEEEECCG
T ss_pred eEEeeeecCccccCceeEEEEeccccCCeEEEEeeec
Confidence 544333333 233333444 578999987543
No 270
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=49.79 E-value=1.3e+02 Score=31.49 Aligned_cols=112 Identities=13% Similarity=0.197 Sum_probs=55.3
Q ss_pred EEECCcEEEEEcccCCCccCCceEEEEcCCC-cEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCC
Q 010770 26 VNIGKSKVVVFGGLVDKRFLSDVVVYDIDNK-LWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLG 102 (501)
Q Consensus 26 ~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~-~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~ 102 (501)
+...++.+|+|=| +.+|+++.... .......... -+.+|. .. -++... ++++|+|=| +
T Consensus 449 it~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~---wp~LP~-~I-DAA~~~~~~~k~yFFkG-------~ 509 (631)
T 1ck7_A 449 IAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATF---WPELPE-KI-DAVYEAPQEEKAVFFAG-------N 509 (631)
T ss_dssp EEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGT---CTTSCS-SC-SBCCEETTTTEEEEEET-------T
T ss_pred eEecCCcEEEEcC-------CEEEEEcCCCCCCCCceecccc---CCCCCc-cc-eEEEEECCCCEEEEEec-------C
Confidence 3334478999977 45788876542 2222211110 011221 11 222222 578999965 3
Q ss_pred cEEEEECCCC--eE-EEEecCCCCCCcCCccEEEEE--cCcEEEEEecCCCCcccccEEEEECCCCc
Q 010770 103 DFWVLDTDIW--QW-SELTSFGDLPSPRDFAAASAI--GNRKIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 103 ~~~~yd~~t~--~W-~~~~~~~~~p~~r~~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
.+|+|+..+. .+ ..+... ..|.....--++.. .++++|+|-| +..|+||..+++
T Consensus 510 ~yWry~~~~l~~GYPk~Is~~-G~P~~~~~IDAAf~~~~~gktYFFkG-------~~ywryd~~~~~ 568 (631)
T 1ck7_A 510 EYWIYSASTLERGYPKPLTSL-GLPPDVQRVDAAFNWSKNKKTYIFAG-------DKFWRYNEVKKK 568 (631)
T ss_dssp EEEEEETTEECTTCCEEGGGG-TCCTTCCCCCBCCCCTTTCEEEEEET-------TEEEEEETTTTE
T ss_pred EEEEECCCccccCCCccchhc-CCCCCCCcceeEEEecCCCeEEEEEC-------CEEEEEcCCccc
Confidence 6888885310 01 112111 22321111112222 4679999977 358999977653
No 271
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=48.26 E-value=2.7e+02 Score=29.36 Aligned_cols=205 Identities=10% Similarity=-0.037 Sum_probs=99.5
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEECCCC----eEEEEec
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIW----QWSELTS 119 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~----~W~~~~~ 119 (501)
..+.++++.+.....+.. ..+.-+++++. ++.||+.-- ....++++++.+. .-..+..
T Consensus 386 ~~I~~id~~~~~~~~~~~-----------~~~~p~gla~d~~~~~Ly~sD~-----~~~~I~~~~~~g~~~~~~~~~~i~ 449 (699)
T 1n7d_A 386 HEVRKMTLDRSEYTSLIP-----------NLRNVVALDTEVASNRIYWSDL-----SQRMICSTQLDRAHGVSSYDTVIS 449 (699)
T ss_dssp TC-CEECTTSCCEECCSC-----------CCTTCCCCEEETTTTEEEECCT-----TTTSBEEEESCCCCC-CCCCCBCC
T ss_pred cceEEEeCCCCcceeeec-----------cCcceEEEccccccCeEEEEec-----CCCeEEEEecCCCCCCcceEEEEe
Confidence 356777777766655431 11222333443 568887632 2346888888751 1111110
Q ss_pred CCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEccc
Q 010770 120 FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (501)
Q Consensus 120 ~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (501)
..+.. -.++++. .++.||+.-. ....|+++++....-..+... .+..| ..+++. ++.||+.--.
T Consensus 450 -~~~~~---P~glavD~~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P---~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 450 -RDIQA---PDGLAVDWIHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKP---RAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp -SCC-----CCCEECCCSSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCC---CCEECCSSSSCCEECCCS
T ss_pred -CCCCC---cceEEEEeeCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCc---ceEEEccCCCcEEEcccC
Confidence 01111 1223332 3458888632 235688898876654444211 12222 233332 5678875411
Q ss_pred CCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEc
Q 010770 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDR 274 (501)
Q Consensus 197 ~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~ 274 (501)
. ...++++++....-+.+... .+. .-.++++ .+++||+.-.. .+.|+++|+
T Consensus 517 ~-----------~~~I~~~~~dG~~~~~l~~~-~l~---~PnGlavd~~~~~LY~aD~~------------~~~I~~~d~ 569 (699)
T 1n7d_A 517 T-----------PAKIKKGGLNGVDIYSLVTE-NIQ---WPNGITLDLLSGRLYWVDSK------------LHSISSIDV 569 (699)
T ss_dssp S-----------SCCEEBCCSSSCCCCEESCS-SCS---SCCCEEECTTTCCEEEEETT------------TTEEEEECS
T ss_pred C-----------CCeEEEEeCCCCCeeEEEeC-CCC---CccEEEEeccCCEEEEEecC------------CCeEEEEcc
Confidence 0 13345556654433333211 111 1123444 46788886532 357899998
Q ss_pred CCCceEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 275 LSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 275 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
+...-+.+.... .......++++.++.||+.-
T Consensus 570 dG~~~~~~~~~~--~~~~~P~glavd~~~lywtd 601 (699)
T 1n7d_A 570 NGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTD 601 (699)
T ss_dssp SSSCCEEECCCS--SSCSSCCCCEEETTEEEEEC
T ss_pred CCCceEEEEecC--CcCCCceEeEEECCEEEEEe
Confidence 765444443321 11223456667788999886
No 272
>3lp9_A LS-24; SEED albumin, plant protein; HET: SPM; 2.20A {Lathyrus sativus} PDB: 3s0l_A 3v6n_A 4hsd_A 3s18_A
Probab=48.19 E-value=25 Score=31.68 Aligned_cols=62 Identities=11% Similarity=0.182 Sum_probs=38.1
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEE-----EEecCCCCCCc------CCccEEEEE-cCcEEEEEecCCCCcccc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWS-----ELTSFGDLPSP------RDFAAASAI-GNRKIVMYGGWDGKKWLS 153 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~-----~~~~~~~~p~~------r~~~~~~~~-~~~~iyv~GG~~~~~~~~ 153 (501)
++++|+|-| +.+|+||..+++-. .+. ...|.. ..-.++... .++++|+|-| +
T Consensus 129 ~~k~yfFkG-------~~yw~~d~~~~~~~~gyPk~i~--~g~p~~~~~g~p~~iDAA~~~~~~g~~YfFkg-------~ 192 (227)
T 3lp9_A 129 GKEVYLFKG-------DQYARIDYGSNSMVNKEIKSIS--SGYPCFRNTIFESGADAAFASHKTNEVYFFKD-------D 192 (227)
T ss_dssp TTEEEEEET-------TEEEEEETTTTEESSSSCEEHH--HHCGGGTTSGGGGCCSEEEECSSTTEEEEEET-------T
T ss_pred CCEEEEEEC-------CEEEEEeCCCccccCCCCeEHH--HCCCCccccccCCCccEEEEcCCCceEEEEEC-------C
Confidence 579999977 46999998765431 111 013321 122233332 5679999977 3
Q ss_pred cEEEEECCCC
Q 010770 154 DVYVLDTISL 163 (501)
Q Consensus 154 ~~~~yd~~t~ 163 (501)
..|+||..+.
T Consensus 193 ~Ywr~d~~~~ 202 (227)
T 3lp9_A 193 HYARVKVTPX 202 (227)
T ss_dssp EEEEEECCSS
T ss_pred EEEEEECCcc
Confidence 5899998765
No 273
>1hxn_A Hemopexin, HPX; heme, binding protein; 1.80A {Oryctolagus cuniculus} SCOP: b.66.1.1
Probab=47.80 E-value=90 Score=27.75 Aligned_cols=61 Identities=26% Similarity=0.391 Sum_probs=33.5
Q ss_pred eCCEEEEEccccCCCCCCcEEEEECCCCeE--EEEecC-CCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECC
Q 010770 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQW--SELTSF-GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTI 161 (501)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W--~~~~~~-~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~ 161 (501)
.++++|+|=|. .+|+++.....+ ..+... ..+|... . ++... ++++|+|-| +.+|+|+..
T Consensus 27 ~~g~~yfFkg~-------~~Wr~~~~~~~~~p~~Is~~wpgLP~~I-D-AA~~~-~~~~yfFkG-------~~yw~~~~~ 89 (219)
T 1hxn_A 27 NHGATYVFSGS-------HYWRLDTNRDGWHSWPIAHQWPQGPSTV-D-AAFSW-EDKLYLIQD-------TKVYVFLTK 89 (219)
T ss_dssp TTSCEEEEETT-------EEEESSSSSCTTCCEEGGGTCTTSCSSC-S-EEEEE-TTEEEEEET-------TEEEEEECS
T ss_pred CCCcEEEEeCC-------EEEEEcCCCCCCCceEhhhhccCCCCCc-c-EEEEE-CCcEEEecC-------CEEEEEeCC
Confidence 47889999662 356655432211 222211 2345322 2 33334 679999976 458899865
Q ss_pred C
Q 010770 162 S 162 (501)
Q Consensus 162 t 162 (501)
+
T Consensus 90 ~ 90 (219)
T 1hxn_A 90 G 90 (219)
T ss_dssp S
T ss_pred C
Confidence 3
No 274
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=47.36 E-value=1.5e+02 Score=26.25 Aligned_cols=198 Identities=12% Similarity=-0.106 Sum_probs=104.4
Q ss_pred cEEEEE-CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCC
Q 010770 23 HSAVNI-GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSR 99 (501)
Q Consensus 23 h~~~~~-~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~ 99 (501)
|.+++. .++.||+.-.. ...+++|++....-..+... .. ..-+.+++. ++.||+.-..
T Consensus 39 ~gi~~d~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~~---------~~-~~p~~ia~d~~~~~lyv~d~~---- 99 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDIS-----EPSIGRASLHGGEPTTIIRQ---------DL-GSPEGIALDHLGRTIFWTDSQ---- 99 (267)
T ss_dssp EEEEEETTTTEEEEEETT-----TTEEEEEESSSCCCEEEECT---------TC-CCEEEEEEETTTTEEEEEETT----
T ss_pred EEEEEecCCCEEEEEECC-----CCEEEEEecCCCCcEEEEEC---------CC-CCccEEEEEecCCeEEEEECC----
Confidence 344443 34688886542 35689999986643332211 11 122344443 5789987532
Q ss_pred CCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCC
Q 010770 100 RLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (501)
Q Consensus 100 ~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r 178 (501)
.+.+.+++++...-..+... .+..| ..+++.. ++.||+..... ....++++++....-..+... .+ .
T Consensus 100 -~~~I~~~~~~g~~~~~~~~~-~~~~P---~~i~vd~~~g~lyv~~~~~---~~~~I~~~~~dg~~~~~~~~~-~~---~ 167 (267)
T 1npe_A 100 -LDRIEVAKMDGTQRRVLFDT-GLVNP---RGIVTDPVRGNLYWTDWNR---DNPKIETSHMDGTNRRILAQD-NL---G 167 (267)
T ss_dssp -TTEEEEEETTSCSCEEEECS-SCSSE---EEEEEETTTTEEEEEECCS---SSCEEEEEETTSCCCEEEECT-TC---S
T ss_pred -CCEEEEEEcCCCCEEEEEEC-CCCCc---cEEEEeeCCCEEEEEECCC---CCcEEEEEecCCCCcEEEEEC-CC---C
Confidence 35688999876543333321 11111 2334443 57999975321 134688888875443333211 11 1
Q ss_pred cceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCCCC
Q 010770 179 CGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHGTG 256 (501)
Q Consensus 179 ~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~~~ 256 (501)
.-..+++. +++||+.-.. .+.+.++|+.+..-..+......| .+++..++.+|+....
T Consensus 168 ~P~gia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~~~~P-----~gi~~d~~~lyva~~~--- 227 (267)
T 1npe_A 168 LPNGLTFDAFSSQLCWVDAG------------THRAECLNPAQPGRRKVLEGLQYP-----FAVTSYGKNLYYTDWK--- 227 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT------------TTEEEEEETTEEEEEEEEECCCSE-----EEEEEETTEEEEEETT---
T ss_pred CCcEEEEcCCCCEEEEEECC------------CCEEEEEecCCCceEEEecCCCCc-----eEEEEeCCEEEEEECC---
Confidence 22334443 4689987532 144566777654333222111122 3455668899986532
Q ss_pred CCCcccccccCeEEEEEcCCCceE
Q 010770 257 GWLSRYDIYYNDTIILDRLSAQWK 280 (501)
Q Consensus 257 ~~~~~~~~~~~~v~~yd~~~~~W~ 280 (501)
.+.|+++|+.+.+-.
T Consensus 228 ---------~~~v~~~d~~~g~~~ 242 (267)
T 1npe_A 228 ---------TNSVIAMDLAISKEM 242 (267)
T ss_dssp ---------TTEEEEEETTTTEEE
T ss_pred ---------CCeEEEEeCCCCCce
Confidence 257899999876543
No 275
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=47.31 E-value=1.7e+02 Score=26.79 Aligned_cols=173 Identities=10% Similarity=0.083 Sum_probs=85.5
Q ss_pred cCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCC
Q 010770 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRR 100 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~ 100 (501)
..|++++- ++.||.+|--..++.--.. ........++ .-..|+++.-++.||.+|--.....
T Consensus 33 ~~h~~~l~-~G~v~~wG~n~~Gqlg~p~----~~~~~i~~ia-------------~G~~hs~~l~~G~v~~wG~n~~Gql 94 (282)
T 3qhy_B 33 YFHGLALK-GGKVLGWGANLNGQLTMPA----ATQSGVDAIA-------------AGNYHSLALKDGEVIAWGGNEDGQT 94 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCSSSTTSCCG----GGGSCCCEEE-------------ECSSEEEEEETTEEEEEECCTTSTT
T ss_pred CCeEEEEE-CCEEEEEeCCCCCCCCCCc----cCCCCEEEEE-------------eCCCEEEEEECCEEEEeeCCCCCCC
Confidence 34777776 7999999854332211000 0001111221 1234666666889999995432211
Q ss_pred CCcEEEEEC--CCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCC
Q 010770 101 LGDFWVLDT--DIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPR 178 (501)
Q Consensus 101 ~~~~~~yd~--~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r 178 (501)
.- | .......+.. -..|+++.. ++.+|..|--.... +. + -.........+. .-
T Consensus 95 -g~-----P~~~~~~v~~ia~-------G~~hs~al~-~G~v~~wG~n~~gq-lg-~--~~~~~~~i~~i~-------~G 149 (282)
T 3qhy_B 95 -TV-----PAEARSGVDAIAA-------GAWASYALK-DGKVIAWGDDSDGQ-TT-V--PAEAQSGVTALD-------GG 149 (282)
T ss_dssp -CC-----CGGGSSSEEEEEE-------ETTEEEEEE-TTEEEEEECCTTST-TS-C--CGGGGSSEEEEE-------EC
T ss_pred -CC-----CcccCCCeEEEEC-------cCCEEEEEe-CCeEEEecCCCCCc-CC-C--CccCCCCeEEEE-------cc
Confidence 00 0 0123344432 235777777 88999998533211 10 0 000011223332 12
Q ss_pred cceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEEeCCEEEEEcCCC
Q 010770 179 CGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITSGGHYLLLFGGHG 254 (501)
Q Consensus 179 ~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~~~~~i~v~GG~~ 254 (501)
..|+++..++.+|.+|-..... .- .. .........+.. ...|++++.++++|.+|-..
T Consensus 150 ~~~~~~l~~G~v~~wG~n~~gq-lg-----~p-----~~~~~~v~~i~~-------G~~hs~al~~G~v~~wG~n~ 207 (282)
T 3qhy_B 150 VYTALAVKNGGVIAWGDNYFGQ-TT-----VP-----AEAQSGVDDVAG-------GIFHSLALKDGKVIAWGDNR 207 (282)
T ss_dssp SSEEEEEETTEEEEEECCTTST-TS-----CC-----GGGGSSEEEEEE-------CSSEEEEEETTEEEEEECCT
T ss_pred cCEEEEEECCEEEEecCCCCCC-CC-----Cc-----eecCCCeEEEEe-------cCCEEEEEECCeEEEEECCC
Confidence 3466666689999998643221 10 00 001133555542 23566666788999999644
No 276
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=47.09 E-value=2e+02 Score=27.42 Aligned_cols=66 Identities=11% Similarity=0.016 Sum_probs=37.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCe---EEEEecCCCCCCcCCccE-EEEEcCc-EEEEEecCCCCcccccEEEEEC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQ---WSELTSFGDLPSPRDFAA-ASAIGNR-KIVMYGGWDGKKWLSDVYVLDT 160 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~---W~~~~~~~~~p~~r~~~~-~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~ 160 (501)
++++||.+... ...+++++++... |..-. ..+..+.+.. ++...++ .|++..+ ...+++||+
T Consensus 147 ~GnaYVt~s~~----~~~I~rV~pdG~~~~~~~~~~---~~~~~~~G~nGIv~~pdg~~Liv~~~------~g~L~~fD~ 213 (334)
T 2p9w_A 147 DGNSYVAFALG----MPAIARVSADGKTVSTFAWES---GNGGQRPGYSGITFDPHSNKLIAFGG------PRALTAFDV 213 (334)
T ss_dssp TSCEEEEEEES----SCEEEEECTTSCCEEEEEECC---CCSSSCCSCSEEEEETTTTEEEEESS------SSSEEEEEC
T ss_pred CCCEEEeCCCC----CCeEEEEeCCCCEEeeeeecC---CCcccccCcceEEEeCCCCEEEEEcC------CCeEEEEcC
Confidence 57999976532 1469999998653 43221 1223344444 4445444 5666544 245899998
Q ss_pred CCCc
Q 010770 161 ISLE 164 (501)
Q Consensus 161 ~t~~ 164 (501)
.+..
T Consensus 214 ~~pv 217 (334)
T 2p9w_A 214 SKPY 217 (334)
T ss_dssp SSSS
T ss_pred CCCc
Confidence 8543
No 277
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=46.54 E-value=1.6e+02 Score=26.31 Aligned_cols=59 Identities=10% Similarity=0.042 Sum_probs=34.8
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEEECCCCeEEEE
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSEL 117 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 117 (501)
+.|.++|+.+++....-... .+.. .-.+++. -+++.++.|+.++ .+.++|..+++-...
T Consensus 45 ~tV~iWd~~tg~~~~~~~~~-------~~~~-~V~~v~~~~~~~~l~sgs~Dg-----~v~iw~~~~~~~~~~ 104 (318)
T 4ggc_A 45 NSVYLWSASSGDILQLLQME-------QPGE-YISSVAWIKEGNYLAVGTSSA-----EVQLWDVQQQKRLRN 104 (318)
T ss_dssp TEEEEEETTTCCEEEEEECC-------STTC-CEEEEEECTTSSEEEEEETTS-----EEEEEETTTTEEEEE
T ss_pred CEEEEEECCCCCEEEEEEec-------CCCC-eEEEEEECCCCCEEEEEECCC-----cEEEeecCCceeEEE
Confidence 45899999998876543221 1111 1122222 2567777777543 578899988875443
No 278
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=45.64 E-value=2.2e+02 Score=27.56 Aligned_cols=19 Identities=21% Similarity=0.186 Sum_probs=15.4
Q ss_pred cCcEEEEECCcEEEEEccc
Q 010770 21 SGHSAVNIGKSKVVVFGGL 39 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~ 39 (501)
..|++++..++.||.+|--
T Consensus 68 ~~hs~~l~~~G~v~~wG~n 86 (413)
T 1a12_A 68 GMHTVCLSKSGQVYSFGCN 86 (413)
T ss_dssp SSEEEEEETTSCEEEEECC
T ss_pred CCeEEEEcCCCCEEEEECC
Confidence 4588888888999999953
No 279
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=45.24 E-value=1.8e+02 Score=26.56 Aligned_cols=108 Identities=11% Similarity=0.037 Sum_probs=52.7
Q ss_pred CCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEE
Q 010770 29 GKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVL 107 (501)
Q Consensus 29 ~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~y 107 (501)
.++..++.|+.+ ..+.+||+.+++-...-. ...... .+++. -++.+++.|+.++ .+.++
T Consensus 75 ~dg~~l~s~s~D-----~~v~~wd~~~~~~~~~~~---------~h~~~v-~~~~~~~~~~~l~s~s~D~-----~i~vw 134 (319)
T 3frx_A 75 ADGAYALSASWD-----KTLRLWDVATGETYQRFV---------GHKSDV-MSVDIDKKASMIISGSRDK-----TIKVW 134 (319)
T ss_dssp TTSSEEEEEETT-----SEEEEEETTTTEEEEEEE---------CCSSCE-EEEEECTTSCEEEEEETTS-----CEEEE
T ss_pred CCCCEEEEEeCC-----CEEEEEECCCCCeeEEEc---------cCCCcE-EEEEEcCCCCEEEEEeCCC-----eEEEE
Confidence 345566666643 357888988875432111 011111 12222 2456777777543 47778
Q ss_pred ECCCCeEEEEecCCCCCCcCCccEEEEEc------CcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 108 DTDIWQWSELTSFGDLPSPRDFAAASAIG------NRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 108 d~~t~~W~~~~~~~~~p~~r~~~~~~~~~------~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
|.....-..+.. ......+..... ++.+++.|+.++ .+..+|+.+.+-.
T Consensus 135 d~~~~~~~~~~~-----h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~~wd~~~~~~~ 189 (319)
T 3frx_A 135 TIKGQCLATLLG-----HNDWVSQVRVVPNEKADDDSVTIISAGNDK-----MVKAWNLNQFQIE 189 (319)
T ss_dssp ETTSCEEEEECC-----CSSCEEEEEECCC------CCEEEEEETTS-----CEEEEETTTTEEE
T ss_pred ECCCCeEEEEec-----cCCcEEEEEEccCCCCCCCccEEEEEeCCC-----EEEEEECCcchhh
Confidence 887554333321 011111122221 223566666543 3778888776543
No 280
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=44.83 E-value=1.9e+02 Score=26.68 Aligned_cols=62 Identities=6% Similarity=-0.013 Sum_probs=31.6
Q ss_pred cEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCcEEEEEC
Q 010770 31 SKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGDFWVLDT 109 (501)
Q Consensus 31 ~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~ 109 (501)
+.+++.|+.+ ..+.++|+.+++....-. ...... .+++. -++..++.||.+ ..+.++|+
T Consensus 88 ~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~---------~h~~~v-~~v~~sp~~~~l~s~~~d-----~~i~~wd~ 147 (343)
T 2xzm_R 88 NCFAISSSWD-----KTLRLWDLRTGTTYKRFV---------GHQSEV-YSVAFSPDNRQILSAGAE-----REIKLWNI 147 (343)
T ss_dssp TTEEEEEETT-----SEEEEEETTSSCEEEEEE---------CCCSCE-EEEEECSSTTEEEEEETT-----SCEEEEES
T ss_pred CCEEEEEcCC-----CcEEEEECCCCcEEEEEc---------CCCCcE-EEEEECCCCCEEEEEcCC-----CEEEEEec
Confidence 4455555543 357788988775433211 011111 22222 245566666643 35777887
Q ss_pred CCC
Q 010770 110 DIW 112 (501)
Q Consensus 110 ~t~ 112 (501)
...
T Consensus 148 ~~~ 150 (343)
T 2xzm_R 148 LGE 150 (343)
T ss_dssp SSC
T ss_pred cCC
Confidence 643
No 281
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=44.49 E-value=2.3e+02 Score=27.43 Aligned_cols=151 Identities=9% Similarity=-0.045 Sum_probs=80.0
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
+++||+.... ...+.++|+.++.-..+... ....+ .+...++ .||+....... .++++|..+..
T Consensus 141 ~g~lyv~d~~-----~~~I~~id~~~g~~~~~~~~-----~~~~~-ia~~~~g~~l~~~d~~~~~----~I~~~d~~~~~ 205 (409)
T 3hrp_A 141 NNTVLAYQRD-----DPRVRLISVDDNKVTTVHPG-----FKGGK-PAVTKDKQRVYSIGWEGTH----TVYVYMKASGW 205 (409)
T ss_dssp TTEEEEEETT-----TTEEEEEETTTTEEEEEEET-----CCBCB-CEECTTSSEEEEEBSSTTC----EEEEEEGGGTT
T ss_pred CCCEEEEecC-----CCcEEEEECCCCEEEEeecc-----CCCCc-eeEecCCCcEEEEecCCCc----eEEEEEcCCCc
Confidence 5789998642 24699999998887776542 11123 3333333 56665432211 68999987543
Q ss_pred e-EEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCcee-e-E
Q 010770 165 W-MQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCG-H-T 239 (501)
Q Consensus 165 W-~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~-~-s 239 (501)
- ..+... ..+....-+.+++. ++.||+... . ..+++||+.+.....+...+........ . .
T Consensus 206 ~~~~~g~~-~~~~~~~p~~iav~p~~g~lyv~d~---~----------~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ 271 (409)
T 3hrp_A 206 APTRIGQL-GSTFSGKIGAVALDETEEWLYFVDS---N----------KNFGRFNVKTQEVTLIKQLELSGSLGTNPGPY 271 (409)
T ss_dssp CEEEEEEC-CTTSCSCCCBCEECTTSSEEEEECT---T----------CEEEEEETTTCCEEEEEECCCCSCCCCSSCCE
T ss_pred eeEEeeec-cchhcCCcEEEEEeCCCCeEEEEEC---C----------CcEEEEECCCCCEEEEecccccCCCCCCcccc
Confidence 2 233100 01011222334444 578998422 1 3456778887776555211111111111 1 4
Q ss_pred EEEe--CCEEEEEcCCCCCCCCcccccccCeEEEEEcCCC
Q 010770 240 ITSG--GHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSA 277 (501)
Q Consensus 240 ~~~~--~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~ 277 (501)
+++. ++.||+.... .+.|++|+++..
T Consensus 272 ia~~p~~g~lyv~d~~------------~~~I~~~~~~g~ 299 (409)
T 3hrp_A 272 LIYYFVDSNFYMSDQN------------LSSVYKITPDGE 299 (409)
T ss_dssp EEEETTTTEEEEEETT------------TTEEEEECTTCC
T ss_pred EEEeCCCCEEEEEeCC------------CCEEEEEecCCC
Confidence 4443 5789986532 357899998765
No 282
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=40.02 E-value=3.2e+02 Score=27.83 Aligned_cols=66 Identities=8% Similarity=0.058 Sum_probs=38.1
Q ss_pred EEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEE
Q 010770 88 HMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQ 167 (501)
Q Consensus 88 ~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~ 167 (501)
..++.|+.+ ..+..||..+.+....-. . ....-.+++...++.+++.||.++ .+.++|..+.+-..
T Consensus 161 ~~l~s~s~D-----~~v~lwd~~~~~~~~~l~---~-H~~~V~~v~fspdg~~las~s~D~-----~i~lwd~~~g~~~~ 226 (611)
T 1nr0_A 161 FRIISGSDD-----NTVAIFEGPPFKFKSTFG---E-HTKFVHSVRYNPDGSLFASTGGDG-----TIVLYNGVDGTKTG 226 (611)
T ss_dssp CEEEEEETT-----SCEEEEETTTBEEEEEEC---C-CSSCEEEEEECTTSSEEEEEETTS-----CEEEEETTTCCEEE
T ss_pred eEEEEEeCC-----CeEEEEECCCCeEeeeec---c-ccCceEEEEECCCCCEEEEEECCC-----cEEEEECCCCcEee
Confidence 356667654 347788877665433211 1 111223344445678888888654 37888887776543
No 283
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=39.79 E-value=3.4e+02 Score=28.10 Aligned_cols=66 Identities=11% Similarity=0.018 Sum_probs=32.9
Q ss_pred cEEEEECCCCe---EEEEecCCCC-CCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEE----CCCCceEEcc
Q 010770 103 DFWVLDTDIWQ---WSELTSFGDL-PSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLD----TISLEWMQLP 169 (501)
Q Consensus 103 ~~~~yd~~t~~---W~~~~~~~~~-p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd----~~t~~W~~~~ 169 (501)
.++++|+.+++ |.++.....+ .........+...|+++++.... .......++.+| +.+.++..+.
T Consensus 225 ~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~-~~~~~~~l~~~d~~~~~~~g~~~~~~ 298 (719)
T 1z68_A 225 RIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLK-RVQNVSVLSICDFREDWQTWDCPKTQ 298 (719)
T ss_dssp EEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEE-SSTTEEEEEEEEECSSSSSEECCGGG
T ss_pred EEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEec-cccCeEEEEEEcccCCCCCCceEEEE
Confidence 68888888765 2233210000 01111123333456676655321 112235689999 8887776654
No 284
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=39.71 E-value=1.6e+02 Score=30.34 Aligned_cols=77 Identities=16% Similarity=0.099 Sum_probs=46.9
Q ss_pred CCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCe--EEEEecC
Q 010770 45 LSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQ--WSELTSF 120 (501)
Q Consensus 45 ~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~--W~~~~~~ 120 (501)
...+..+|+.++ .|+... +.+......+..++.||+ |.. -..++.||..+.+ |+.-.
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~-----------~~~~~~g~~~tagglvf~-g~~-----dg~l~A~D~~tG~~lW~~~~-- 525 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKE-----------HLPLWAGVLATAGNLVFT-GTG-----DGYFKAFDAKSGKELWKFQT-- 525 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEE-----------SSCCCSCCEEETTTEEEE-ECT-----TSEEEEEETTTCCEEEEEEC--
T ss_pred cceEEEEECCCCCEEEEecC-----------CCCCcccceEeCCCEEEE-ECC-----CCcEEEEECCCCCEEEEecC--
Confidence 356889999887 487643 223333445555777777 432 2468999998876 76543
Q ss_pred CCCCCcCCccEEEEEcCcEEEEE
Q 010770 121 GDLPSPRDFAAASAIGNRKIVMY 143 (501)
Q Consensus 121 ~~~p~~r~~~~~~~~~~~~iyv~ 143 (501)
+.......++...+++.||.
T Consensus 526 ---~~g~~a~P~~y~~~G~qYv~ 545 (582)
T 1flg_A 526 ---GSGIVSPPITWEQDGEQYLG 545 (582)
T ss_dssp ---SSCCCSCCEEEEETTEEEEE
T ss_pred ---CCCcccCceEEEECCEEEEE
Confidence 33333333444346787776
No 285
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=38.37 E-value=2.8e+02 Score=26.77 Aligned_cols=18 Identities=22% Similarity=0.279 Sum_probs=15.0
Q ss_pred cCcEEEEECCcEEEEEcc
Q 010770 21 SGHSAVNIGKSKVVVFGG 38 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG 38 (501)
..|++++..++.||.+|-
T Consensus 188 ~~hs~alt~~G~v~~wG~ 205 (423)
T 3mvd_K 188 ADHLVILTTAGKVFTVGC 205 (423)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCeEEEEecCCeEEEeeC
Confidence 458888888899999994
No 286
>1ck7_A Protein (gelatinase A); hydrolase (metalloprotease), FULL-length, metalloproteinase; 2.80A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 g.14.1.2 g.14.1.2 g.14.1.2 PDB: 1gxd_A
Probab=37.77 E-value=2.2e+02 Score=29.79 Aligned_cols=65 Identities=20% Similarity=0.227 Sum_probs=35.3
Q ss_pred EEEEeCCEEEEEccccCCCCCCcEEEEECCCC-eEEEEecC---CCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEE
Q 010770 81 IAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIW-QWSELTSF---GDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 81 ~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~-~W~~~~~~---~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 156 (501)
+++.+++++|+|=| +.+|+++.... ........ ..+|.. ..++.....++++|+|-| +..|
T Consensus 448 Ait~~rg~~yfFKg-------~~yWr~~~~~~~~~~P~~Is~~wp~LP~~-IDAA~~~~~~~k~yFFkG-------~~yW 512 (631)
T 1ck7_A 448 GIAQIRGEIFFFKD-------RFIWRTVTPRDKPMGPLLVATFWPELPEK-IDAVYEAPQEEKAVFFAG-------NEYW 512 (631)
T ss_dssp EEEECSSSEEEECS-------SEEEEESCTTSCCEEEEEGGGTCTTSCSS-CSBCCEETTTTEEEEEET-------TEEE
T ss_pred eeEecCCcEEEEcC-------CEEEEEcCCCCCCCCceeccccCCCCCcc-ceEEEEECCCCEEEEEec-------CEEE
Confidence 44556889999966 24777765432 12111111 123432 222222224568999976 3588
Q ss_pred EEEC
Q 010770 157 VLDT 160 (501)
Q Consensus 157 ~yd~ 160 (501)
+|+.
T Consensus 513 ry~~ 516 (631)
T 1ck7_A 513 IYSA 516 (631)
T ss_dssp EEET
T ss_pred EECC
Confidence 8885
No 287
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=36.00 E-value=2.9e+02 Score=26.25 Aligned_cols=73 Identities=10% Similarity=-0.047 Sum_probs=44.4
Q ss_pred CCEEEEEccccC----CCCCCcEEEEECCCCeE-EEEecCCCCCCcCCccEEEEEcCcE-EEEEecCCCCcccccEEEEE
Q 010770 86 DCHMFIFGGRFG----SRRLGDFWVLDTDIWQW-SELTSFGDLPSPRDFAAASAIGNRK-IVMYGGWDGKKWLSDVYVLD 159 (501)
Q Consensus 86 ~~~iyv~GG~~~----~~~~~~~~~yd~~t~~W-~~~~~~~~~p~~r~~~~~~~~~~~~-iyv~GG~~~~~~~~~~~~yd 159 (501)
++++|+...... ....++++++|+.+++- ..++ .+...++++...+++ +++.+... .+++.+||
T Consensus 278 ~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~------~g~~p~~i~~s~Dg~~~l~v~~~~----~~~V~ViD 347 (373)
T 2mad_H 278 SDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQIS------LGHDVDAISVAQDGGPDLYALSAG----TEVLHIYD 347 (373)
T ss_pred CCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEE------CCCCcCeEEECCCCCeEEEEEcCC----CCeEEEEE
Confidence 568999754211 12346899999998765 3332 333445666665655 44444322 36799999
Q ss_pred CCCCceEEc
Q 010770 160 TISLEWMQL 168 (501)
Q Consensus 160 ~~t~~W~~~ 168 (501)
..+.+-...
T Consensus 348 ~~t~~vv~~ 356 (373)
T 2mad_H 348 AGAGDQDQS 356 (373)
T ss_pred CCCCCEEee
Confidence 988775543
No 288
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=35.18 E-value=2.4e+02 Score=25.12 Aligned_cols=65 Identities=12% Similarity=0.021 Sum_probs=33.6
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCC--CeEEEEecCCCCCCcCCccEEEEE-c--CcEEEEEecCCCCcccccEEEEEC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDI--WQWSELTSFGDLPSPRDFAAASAI-G--NRKIVMYGGWDGKKWLSDVYVLDT 160 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t--~~W~~~~~~~~~p~~r~~~~~~~~-~--~~~iyv~GG~~~~~~~~~~~~yd~ 160 (501)
++.+++.|+.+ ..+.+||..+ ..+..+.. +......-.++.+ . ++.+++.|+.++ .+.+||+
T Consensus 22 ~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~~~---~~~~~~~v~~~~~~~~~d~~~l~s~~~dg-----~v~vwd~ 88 (351)
T 3f3f_A 22 YGRHVATCSSD-----QHIKVFKLDKDTSNWELSDS---WRAHDSSIVAIDWASPEYGRIIASASYDK-----TVKLWEE 88 (351)
T ss_dssp SSSEEEEEETT-----SEEEEEEECSSSCCEEEEEE---EECCSSCEEEEEECCGGGCSEEEEEETTS-----CEEEEEE
T ss_pred CCCEEEEeeCC-----CeEEEEECCCCCCcceecce---eccCCCcEEEEEEcCCCCCCEEEEEcCCC-----eEEEEec
Confidence 45666666643 2466777664 33444332 1111111222333 3 357778887654 3777887
Q ss_pred CCC
Q 010770 161 ISL 163 (501)
Q Consensus 161 ~t~ 163 (501)
.+.
T Consensus 89 ~~~ 91 (351)
T 3f3f_A 89 DPD 91 (351)
T ss_dssp CTT
T ss_pred CCC
Confidence 664
No 289
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=34.62 E-value=2.4e+02 Score=24.86 Aligned_cols=180 Identities=9% Similarity=-0.094 Sum_probs=93.6
Q ss_pred eEEEEe--CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEE
Q 010770 80 HIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 80 h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~ 156 (501)
+..+.. +++||+.-. ..+.++++++.+..-..+... .+ ..-+.+++.. ++.||+.... .+.+.
T Consensus 39 ~gi~~d~~~~~ly~~d~-----~~~~I~~~~~~g~~~~~~~~~-~~---~~p~~ia~d~~~~~lyv~d~~-----~~~I~ 104 (267)
T 1npe_A 39 IGLAFDCVDKVVYWTDI-----SEPSIGRASLHGGEPTTIIRQ-DL---GSPEGIALDHLGRTIFWTDSQ-----LDRIE 104 (267)
T ss_dssp EEEEEETTTTEEEEEET-----TTTEEEEEESSSCCCEEEECT-TC---CCEEEEEEETTTTEEEEEETT-----TTEEE
T ss_pred EEEEEecCCCEEEEEEC-----CCCEEEEEecCCCCcEEEEEC-CC---CCccEEEEEecCCeEEEEECC-----CCEEE
Confidence 444443 568998743 235799999987654333211 11 1223444443 4689987642 34688
Q ss_pred EEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCC
Q 010770 157 VLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSS 234 (501)
Q Consensus 157 ~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~ 234 (501)
++++....-..+... ... .-..+++. +++||+....... ..+++++++...-+.+.. ...
T Consensus 105 ~~~~~g~~~~~~~~~-~~~---~P~~i~vd~~~g~lyv~~~~~~~----------~~I~~~~~dg~~~~~~~~---~~~- 166 (267)
T 1npe_A 105 VAKMDGTQRRVLFDT-GLV---NPRGIVTDPVRGNLYWTDWNRDN----------PKIETSHMDGTNRRILAQ---DNL- 166 (267)
T ss_dssp EEETTSCSCEEEECS-SCS---SEEEEEEETTTTEEEEEECCSSS----------CEEEEEETTSCCCEEEEC---TTC-
T ss_pred EEEcCCCCEEEEEEC-CCC---CccEEEEeeCCCEEEEEECCCCC----------cEEEEEecCCCCcEEEEE---CCC-
Confidence 999875543333211 111 11334443 5789987532111 234455655443333321 111
Q ss_pred ceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 235 RCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 235 r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
..-.++++ .++.||+.-.. .+.|+++|++...-..+... ...-.+++..++.+|+..
T Consensus 167 ~~P~gia~d~~~~~lyv~d~~------------~~~I~~~~~~g~~~~~~~~~-----~~~P~gi~~d~~~lyva~ 225 (267)
T 1npe_A 167 GLPNGLTFDAFSSQLCWVDAG------------THRAECLNPAQPGRRKVLEG-----LQYPFAVTSYGKNLYYTD 225 (267)
T ss_dssp SCEEEEEEETTTTEEEEEETT------------TTEEEEEETTEEEEEEEEEC-----CCSEEEEEEETTEEEEEE
T ss_pred CCCcEEEEcCCCCEEEEEECC------------CCEEEEEecCCCceEEEecC-----CCCceEEEEeCCEEEEEE
Confidence 12234444 35688886532 36799999876433333221 112245566688999975
No 290
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=33.63 E-value=4.4e+02 Score=27.64 Aligned_cols=151 Identities=11% Similarity=0.011 Sum_probs=77.0
Q ss_pred eCCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 85 IDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 85 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
.+++||+.-. ..+.+.++++....-..+... .+..|+ .+++. .++.||+..- .....++++++...
T Consensus 463 ~~g~LY~tD~-----~~~~I~v~d~dg~~~~~l~~~-~~~~P~---giavDp~~g~ly~td~----~~~~~I~~~~~dG~ 529 (699)
T 1n7d_A 463 IHSNIYWTDS-----VLGTVSVADTKGVKRKTLFRE-QGSKPR---AIVVDPVHGFMYWTDW----GTPAKIKKGGLNGV 529 (699)
T ss_dssp SSSBCEECCT-----TTSCEEEEBSSSCCEEEECCC-SSCCCC---CEECCSSSSCCEECCC----SSSCCEEBCCSSSC
T ss_pred eCCcEEEEec-----cCCeEEEEecCCCceEEEEeC-CCCCcc---eEEEccCCCcEEEccc----CCCCeEEEEeCCCC
Confidence 3678888632 235688999887654444321 122222 22332 2457877541 11245777777644
Q ss_pred ceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEE
Q 010770 164 EWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTIT 241 (501)
Q Consensus 164 ~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~ 241 (501)
.-+.+... .+. .-.++++. +++||+.-.. .+.|+++|+....-+.+... ........+++
T Consensus 530 ~~~~l~~~-~l~---~PnGlavd~~~~~LY~aD~~------------~~~I~~~d~dG~~~~~~~~~--~~~~~~P~gla 591 (699)
T 1n7d_A 530 DIYSLVTE-NIQ---WPNGITLDLLSGRLYWVDSK------------LHSISSIDVNGGNRKTILED--EKRLAHPFSLA 591 (699)
T ss_dssp CCCEESCS-SCS---SCCCEEECTTTCCEEEEETT------------TTEEEEECSSSSCCEEECCC--SSSCSSCCCCE
T ss_pred CeeEEEeC-CCC---CccEEEEeccCCEEEEEecC------------CCeEEEEccCCCceEEEEec--CCcCCCceEeE
Confidence 33332211 111 11234443 5788886532 14466677765444444311 01111233556
Q ss_pred EeCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 242 SGGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 242 ~~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
+.++.||+.-.. .+.|.++|+.+.+
T Consensus 592 vd~~~lywtd~~------------~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 592 VFEDKVFWTDII------------NEAIFSANRLTGS 616 (699)
T ss_dssp EETTEEEEECST------------TTCEEEEETTTEE
T ss_pred EECCEEEEEeCC------------CCeEEEEEccCCC
Confidence 677888887632 2568999876554
No 291
>3k6s_A Integrin alpha-X; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_A* 3k72_A*
Probab=33.29 E-value=3.8e+02 Score=30.08 Aligned_cols=159 Identities=16% Similarity=0.113 Sum_probs=83.8
Q ss_pred cCcEEEEECCcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe---CCEEEEEccccC
Q 010770 21 SGHSAVNIGKSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI---DCHMFIFGGRFG 97 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~---~~~iyv~GG~~~ 97 (501)
.|+++....++ + ++|.-+...-...++.|......|..-..... ........+++.++. +...+|+|--.
T Consensus 335 ~GfSa~~t~d~-~-~~GapG~~~w~G~v~~~~~~~~~~~~~~~~~~----~~~~~sylGySVa~~~~~g~~~~v~GAP~- 407 (1095)
T 3k6s_A 335 EGFSAVFTPDG-P-VLGAVGSFTWSGGAFLYPPNMSPTFINMSQEN----VDMRDSYLGYSTELALWKGVQSLVLGAPR- 407 (1095)
T ss_dssp TTSSEECCTTC-C-EEEESCSTTTTBEEEECCSSSCCEEECCCSSC----CCCCSCCBTSSEECCCCSSSCEEEEEETT-
T ss_pred ccccceecCCc-c-eEcccccCCccceeEEecCCCcceeecccccc----ccccccccceeeEEeccCCceEEEEEccc-
Confidence 45666655544 3 77765444444567788876655443221110 111222334444432 23456666322
Q ss_pred CCCCCcEEEEECCCCeEEEEec-CCCCCCcCCccEEEEE---cC--cEEEEEecCCC--CcccccEEEEECCC--CceEE
Q 010770 98 SRRLGDFWVLDTDIWQWSELTS-FGDLPSPRDFAAASAI---GN--RKIVMYGGWDG--KKWLSDVYVLDTIS--LEWMQ 167 (501)
Q Consensus 98 ~~~~~~~~~yd~~t~~W~~~~~-~~~~p~~r~~~~~~~~---~~--~~iyv~GG~~~--~~~~~~~~~yd~~t--~~W~~ 167 (501)
......+++|......|..... .+.-....++++.++. +| ..++++|.-.. ......+++|.-.. ..|..
T Consensus 408 ~~~~G~V~i~~~~~~~~~~~~~~~g~~~gs~fG~sva~~DvngDG~~DllvvGAP~~~~~~~~G~Vyvy~~~~~~~~~~~ 487 (1095)
T 3k6s_A 408 YQHTGKAVIFTQVSRQWRMKAEVTGTQIGSYFGASLCSVDVDSDGSTDLVLIGAPHYYEQTRGGQVSVCPLPRGWRRWWC 487 (1095)
T ss_dssp GGGTCEEEEEECCTTTCCEEEEECCSSTTSCTTSCEEEECSSSSSSCCEEEEECSSCCSSCCCBCEEEEECCSSTTCCCS
T ss_pred ccccceEEEEEecCCcceEEeecccCcccCcCCceEEEEEeCCCCCccEEEECCccccCcCCCCEEEEEEeCCCCcceee
Confidence 2234578999888778877553 2333344566666653 22 26777774321 22345688885543 45764
Q ss_pred ccc-CCC--CCCCCcceeEEEe
Q 010770 168 LPV-TGS--VPPPRCGHTATMV 186 (501)
Q Consensus 168 ~~~-~~~--~p~~r~~~~~~~~ 186 (501)
... .|. .+..|++.+++.+
T Consensus 488 ~~~l~g~~~~~~~~FG~sva~~ 509 (1095)
T 3k6s_A 488 DAVLYGEQGHPWGRFGAALTVL 509 (1095)
T ss_dssp CSSCCCCCSCSSCCBTSCEEEE
T ss_pred eEEeecccCCccccCccceEee
Confidence 321 222 1457888888764
No 292
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=30.74 E-value=3.2e+02 Score=25.10 Aligned_cols=205 Identities=11% Similarity=-0.018 Sum_probs=107.5
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEECCC----CeEEEEec
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDI----WQWSELTS 119 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t----~~W~~~~~ 119 (501)
+.+.++|+.+.....+. +....-++.+.. ++.||+.-.. ...++++++.+ ..-..+..
T Consensus 10 ~~I~~i~~~~~~~~~~~-----------~~~~~p~g~~~d~~~~~ly~~D~~-----~~~I~~~~~~g~~~~~~~~~~~~ 73 (316)
T 1ijq_A 10 HEVRKMTLDRSEYTSLI-----------PNLRNVVALDTEVASNRIYWSDLS-----QRMICSTQLDRAHGVSSYDTVIS 73 (316)
T ss_dssp SSEEEEETTSCCCEEEE-----------CSCSSEEEEEEETTTTEEEEEETT-----TTEEEEEEC--------CEEEEC
T ss_pred CeEEEEECCCcceEehh-----------cCCCceEEEEEEeCCCEEEEEECC-----CCcEEEEECCCCCCCcccEEEEe
Confidence 46889999887766643 112223444444 5689988532 35688999876 22222221
Q ss_pred CCCCCCcCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEccc
Q 010770 120 FGDLPSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGR 196 (501)
Q Consensus 120 ~~~~p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~ 196 (501)
..+.. -.++++. .++.||+.-.. .+.+.++|+....-..+.. ..+..| ..+++. ++.||+..-.
T Consensus 74 -~~~~~---p~glavd~~~~~ly~~d~~-----~~~I~~~~~~g~~~~~~~~-~~~~~P---~~iavdp~~g~ly~~d~~ 140 (316)
T 1ijq_A 74 -RDIQA---PDGLAVDWIHSNIYWTDSV-----LGTVSVADTKGVKRKTLFR-ENGSKP---RAIVVDPVHGFMYWTDWG 140 (316)
T ss_dssp -SSCSC---CCEEEEETTTTEEEEEETT-----TTEEEEEETTSSSEEEEEE-CTTCCE---EEEEEETTTTEEEEEECS
T ss_pred -CCCCC---cCEEEEeecCCeEEEEECC-----CCEEEEEeCCCCceEEEEE-CCCCCc---ceEEeCCCCCEEEEEccC
Confidence 11111 1344443 35689997542 3468889887654333321 112222 234443 6789987521
Q ss_pred CCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEc
Q 010770 197 GGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDR 274 (501)
Q Consensus 197 ~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~ 274 (501)
. -..+++++++...-+.+... . -..-.++++ .+++||+.-.. .+.|+++|+
T Consensus 141 ~-----------~~~I~~~~~dG~~~~~~~~~-~---~~~P~gla~d~~~~~lY~~D~~------------~~~I~~~d~ 193 (316)
T 1ijq_A 141 T-----------PAKIKKGGLNGVDIYSLVTE-N---IQWPNGITLDLLSGRLYWVDSK------------LHSISSIDV 193 (316)
T ss_dssp S-----------SCEEEEEETTSCCEEEEECS-S---CSCEEEEEEETTTTEEEEEETT------------TTEEEEEET
T ss_pred C-----------CCeEEEEcCCCCCeEEEEEC-C---CCCceEEEEeccCCEEEEEECC------------CCeEEEEec
Confidence 1 02355667665444333211 1 112234444 36799986532 357999998
Q ss_pred CCCceEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 275 LSAQWKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 275 ~~~~W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
+...-+.+.... .....-.++++.++.+|+.-
T Consensus 194 dg~~~~~~~~~~--~~~~~P~giav~~~~ly~~d 225 (316)
T 1ijq_A 194 NGGNRKTILEDE--KRLAHPFSLAVFEDKVFWTD 225 (316)
T ss_dssp TSCSCEEEEECT--TTTSSEEEEEEETTEEEEEE
T ss_pred CCCceEEEeecC--CccCCcEEEEEECCEEEEEE
Confidence 765444443221 11223356677789999875
No 293
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=29.09 E-value=1.9e+02 Score=28.80 Aligned_cols=18 Identities=17% Similarity=0.274 Sum_probs=14.8
Q ss_pred cCcEEEEECCcEEEEEcc
Q 010770 21 SGHSAVNIGKSKVVVFGG 38 (501)
Q Consensus 21 ~~h~~~~~~~~~iyv~GG 38 (501)
..|++++..++.||.+|-
T Consensus 157 ~~hs~alt~~G~vy~wG~ 174 (473)
T 3of7_A 157 DNMSCALFSNGEVYAWGT 174 (473)
T ss_dssp SSEEEEEETTSCEEEEEC
T ss_pred CCEEEEEeCCCeEEEeeC
Confidence 358888888899999994
No 294
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=28.87 E-value=3.8e+02 Score=25.46 Aligned_cols=203 Identities=10% Similarity=-0.066 Sum_probs=109.6
Q ss_pred CceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEe--CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCC
Q 010770 46 SDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAI--DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDL 123 (501)
Q Consensus 46 ~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~ 123 (501)
+.+.++++.......+.. ....-.+.+.. ++.||+.-- ....++++++.......+... .+
T Consensus 96 ~~I~~i~~~~~~~~~~~~-----------~~~~~~gl~~d~~~~~ly~~D~-----~~~~I~r~~~~g~~~~~~~~~-~~ 158 (386)
T 3v65_B 96 IDIRQVLPHRSEYTLLLN-----------NLENAIALDFHHRRELVFWSDV-----TLDRILRANLNGSNVEEVVST-GL 158 (386)
T ss_dssp SCEEEECTTSCCCEEEEC-----------SCSCEEEEEEETTTTEEEEEET-----TTTEEEEEETTSCCEEEEECS-SC
T ss_pred ccceeeccCCCcEEEEec-----------CCCccEEEEEecCCCeEEEEeC-----CCCcEEEEecCCCCcEEEEeC-CC
Confidence 467888887766655431 11222334433 578888732 235799999988776665431 12
Q ss_pred CCcCCccEEEEE-cCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCC
Q 010770 124 PSPRDFAAASAI-GNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGG 200 (501)
Q Consensus 124 p~~r~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~ 200 (501)
..+ .+.++. .++.||+.-.. .+.++++++....-..+.. ..+..| ..+++. ++.||+.--..
T Consensus 159 ~~p---~glavd~~~g~lY~~d~~-----~~~I~~~~~dg~~~~~l~~-~~l~~P---~giavdp~~g~ly~td~~~--- 223 (386)
T 3v65_B 159 ESP---GGLAVDWVHDKLYWTDSG-----TSRIEVANLDGAHRKVLLW-QSLEKP---RAIALHPMEGTIYWTDWGN--- 223 (386)
T ss_dssp SCC---CCEEEETTTTEEEEEETT-----TTEEEECBTTSCSCEEEEC-SSCSCE---EEEEEETTTTEEEEEECSS---
T ss_pred CCc---cEEEEEeCCCeEEEEcCC-----CCeEEEEeCCCCceEEeec-CCCCCC---cEEEEEcCCCeEEEeccCC---
Confidence 111 233333 35689987543 2457888876554333321 122222 233443 67888864211
Q ss_pred CcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE--eCCEEEEEcCCCCCCCCcccccccCeEEEEEcCCCc
Q 010770 201 PIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS--GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRLSAQ 278 (501)
Q Consensus 201 ~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~ 278 (501)
...+++++++...-+.+...+ . ..-.++++ .++.||+.-. ..+.|+++|++...
T Consensus 224 --------~~~I~r~~~dG~~~~~~~~~~-~---~~PnGlavd~~~~~lY~aD~------------~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 224 --------TPRIEASSMDGSGRRIIADTH-L---FWPNGLTIDYAGRRMYWVDA------------KHHVIERANLDGSH 279 (386)
T ss_dssp --------SCEEEEEETTSCSCEEEECSS-C---SCEEEEEEEGGGTEEEEEET------------TTTEEEEECTTSCS
T ss_pred --------CCEEEEEeCCCCCcEEEEECC-C---CCeeeEEEeCCCCEEEEEEC------------CCCEEEEEeCCCCe
Confidence 134566677655444443111 1 11224444 5789998753 23679999987544
Q ss_pred eEEcccCCCCCCcccceEEEEECCEEEEEc
Q 010770 279 WKRLPIGNEPPPARAYHSMTCLGSLYLLFG 308 (501)
Q Consensus 279 W~~v~~~~~~p~~r~~~~~~~~~~~iyv~G 308 (501)
-..+.... ...-.++++.++.||+.-
T Consensus 280 ~~~~~~~~----~~~P~giav~~~~ly~td 305 (386)
T 3v65_B 280 RKAVISQG----LPHPFAITVFEDSLYWTD 305 (386)
T ss_dssp CEEEECSS----CSSEEEEEEETTEEEEEE
T ss_pred eEEEEECC----CCCceEEEEECCEEEEee
Confidence 33333221 123356667889999875
No 295
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=28.59 E-value=4e+02 Score=28.18 Aligned_cols=102 Identities=10% Similarity=0.022 Sum_probs=54.8
Q ss_pred CceEEEEcCC--CcEEeceecCCCCCCCCCCCCcceeEEEEeCCEEEEEcccc--C---CCCCCcEEEEECCC-------
Q 010770 46 SDVVVYDIDN--KLWFQPECTGNGSNGQVGPGPRAFHIAVAIDCHMFIFGGRF--G---SRRLGDFWVLDTDI------- 111 (501)
Q Consensus 46 ~~v~~yd~~t--~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~~iyv~GG~~--~---~~~~~~~~~yd~~t------- 111 (501)
++++..|... +.|..+. .|+........++.+|+....+ . .-....+...|..+
T Consensus 269 ~~~~~~~~~~~~~~~~~l~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 336 (711)
T 4hvt_A 269 YDNYILDTKYKNLKLQKIN------------MPSDATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESD 336 (711)
T ss_dssp EEEEEEECSSSSCEEEECC------------SCTTCEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGG
T ss_pred eeEEEEcCCCCCCcceEee------------cCCcceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccc
Confidence 5566666543 5566652 2332222345688999976432 1 11345688888754
Q ss_pred -CeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceE
Q 010770 112 -WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWM 166 (501)
Q Consensus 112 -~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~ 166 (501)
..|+.+- .|.....-..+...++.+++..-.++ ...++++|+.+++|.
T Consensus 337 ~~~~~~~~----~~~~~~~l~~~~~~~~~l~~~~~~~~---~~~l~~~~~~~g~~~ 385 (711)
T 4hvt_A 337 KTSLKILF----TPTANEVFNFISTTKDRVFLATYDNV---VAKVVTFTLENEQWT 385 (711)
T ss_dssp CTTCEEEE----CCCTTEEEEEEEECSSCEEEEEEETT---EEEEEEECEETTEEC
T ss_pred cccceEEE----CCCCCCeEEEEEEECCEEEEEEEECC---EEEEEEEECCCCceE
Confidence 4688743 22222222222333346666543222 345888998888874
No 296
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=28.06 E-value=4.2e+02 Score=25.69 Aligned_cols=110 Identities=14% Similarity=0.122 Sum_probs=60.7
Q ss_pred CcEEEEEcccCCCccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEEeCC-EEEEEccccCCCCCCcEEEEE
Q 010770 30 KSKVVVFGGLVDKRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVAIDC-HMFIFGGRFGSRRLGDFWVLD 108 (501)
Q Consensus 30 ~~~iyv~GG~~~~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~~~~-~iyv~GG~~~~~~~~~~~~yd 108 (501)
++.||+.--. ..+.++|+.++....+.. ...+-.+.++..++ .||+.....+ .....+..++
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~----------~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~ 211 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS----------GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILT 211 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC----------CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEE
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec----------CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEe
Confidence 4678887431 679999999988877642 12222333333344 5888864322 1222456666
Q ss_pred CCCCeEE---EEecCCCCCCcCCccEEEEEc-CcEEEEEecCCCCcccccEEEEECCCCceEEc
Q 010770 109 TDIWQWS---ELTSFGDLPSPRDFAAASAIG-NRKIVMYGGWDGKKWLSDVYVLDTISLEWMQL 168 (501)
Q Consensus 109 ~~t~~W~---~~~~~~~~p~~r~~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~ 168 (501)
... .|. .+.. . ..-+.+++.. ++.||+.--. ...+++||+.+..-..+
T Consensus 212 ~~g-~~~~~~~l~~---~---~~p~giavdp~~g~lyv~d~~-----~~~V~~~~~~~~~~~~~ 263 (430)
T 3tc9_A 212 RES-GFKVITELTK---G---QNCNGAETHPINGELYFNSWN-----AGQVFRYDFTTQETTPL 263 (430)
T ss_dssp GGG-TSCSEEEEEE---C---SSCCCEEECTTTCCEEEEETT-----TTEEEEEETTTTEEEEE
T ss_pred CCC-ceeeeeeecc---C---CCceEEEEeCCCCEEEEEECC-----CCEEEEEECCCCcEEEE
Confidence 543 222 2221 1 2224455544 6788887432 34699999987765333
No 297
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.89 E-value=3.9e+02 Score=28.22 Aligned_cols=151 Identities=13% Similarity=0.048 Sum_probs=76.9
Q ss_pred CCcEEEEECCC--CeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCC-----CcccccEEEEECCC--------Cce
Q 010770 101 LGDFWVLDTDI--WQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDG-----KKWLSDVYVLDTIS--------LEW 165 (501)
Q Consensus 101 ~~~~~~yd~~t--~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~-----~~~~~~~~~yd~~t--------~~W 165 (501)
.+.++..+... ..|.++. .|. . ...+...++++|+....+- .-....+..+|..+ ..|
T Consensus 268 ~~~~~~~~~~~~~~~~~~l~----~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 340 (711)
T 4hvt_A 268 NYDNYILDTKYKNLKLQKIN----MPS--D-ATLQGSFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSL 340 (711)
T ss_dssp CEEEEEEECSSSSCEEEECC----SCT--T-CEEEEEETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTC
T ss_pred ceeEEEEcCCCCCCcceEee----cCC--c-ceEeeeECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccc
Confidence 36677777653 6677774 333 2 2222333558999764331 11345688888765 468
Q ss_pred EEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEee-cCCCCCCCceeeEEEE--
Q 010770 166 MQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLK-LPGQAPSSRCGHTITS-- 242 (501)
Q Consensus 166 ~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~-~~g~~p~~r~~~s~~~-- 242 (501)
+.+-+ + -..+.-..+...++.+++..-... ...+..+|+.++.|.... . ..|... ..+...
T Consensus 341 ~~~~~--~-~~~~~l~~~~~~~~~l~~~~~~~~----------~~~l~~~~~~~g~~~~~~~i--~lp~~~-~~~~~~~~ 404 (711)
T 4hvt_A 341 KILFT--P-TANEVFNFISTTKDRVFLATYDNV----------VAKVVTFTLENEQWTKPVVL--KLPYQN-AIFGMSSY 404 (711)
T ss_dssp EEEEC--C-CTTEEEEEEEECSSCEEEEEEETT----------EEEEEEECEETTEECCCEEE--CCCSTT-CEEEEECC
T ss_pred eEEEC--C-CCCCeEEEEEEECCEEEEEEEECC----------EEEEEEEECCCCceEEEecc--CCCCCe-EEEEEeec
Confidence 87321 1 112222234444667766543221 245667788777774221 1 123211 111111
Q ss_pred -eCCEE-EEEcCCCCCCCCcccccccCeEEEEEcCCCceEEcccC
Q 010770 243 -GGHYL-LLFGGHGTGGWLSRYDIYYNDTIILDRLSAQWKRLPIG 285 (501)
Q Consensus 243 -~~~~i-~v~GG~~~~~~~~~~~~~~~~v~~yd~~~~~W~~v~~~ 285 (501)
.++.+ +.+.+... ...++.||+. ..++.+...
T Consensus 405 ~~~~~~~~~~ss~~~----------P~~~~~~d~~-~~~~~l~~~ 438 (711)
T 4hvt_A 405 EEEEEALITIENSIV----------PPTIYLWVKT-HELKIIRKA 438 (711)
T ss_dssp TTCSCEEEEEECSSS----------CCEEEEECTT-SCEEEEECC
T ss_pred CcCCEEEEEEecCCC----------CCEEEEEeCC-CcEEEEecC
Confidence 22333 34444432 3578899987 777776553
No 298
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=27.49 E-value=4.8e+02 Score=26.96 Aligned_cols=253 Identities=13% Similarity=0.013 Sum_probs=0.0
Q ss_pred CCCCCcCcEEEE---ECCcEEEEEcccCC------------CccCCceEEEEcCCC--cEEeceecCCCCCCCCCCCCcc
Q 010770 16 VPQPRSGHSAVN---IGKSKVVVFGGLVD------------KRFLSDVVVYDIDNK--LWFQPECTGNGSNGQVGPGPRA 78 (501)
Q Consensus 16 ~P~~R~~h~~~~---~~~~~iyv~GG~~~------------~~~~~~v~~yd~~t~--~W~~l~~~~~~~~~~~~p~~R~ 78 (501)
.|....-|.++. -+.++||+-+-... +...+.+-+.|..+. .|...... ....-...|..+.
T Consensus 130 ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~ 208 (595)
T 1fwx_A 130 IPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKW 208 (595)
T ss_dssp CSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSE
T ss_pred CCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCE
Q ss_pred eeEEEEeC--------------CEEEEEccc--------cCCCCCCcEEEEECCCCeEEE-EecCCCCCCcCCccEEEEE
Q 010770 79 FHIAVAID--------------CHMFIFGGR--------FGSRRLGDFWVLDTDIWQWSE-LTSFGDLPSPRDFAAASAI 135 (501)
Q Consensus 79 ~h~~~~~~--------------~~iyv~GG~--------~~~~~~~~~~~yd~~t~~W~~-~~~~~~~p~~r~~~~~~~~ 135 (501)
.+.++.-. +.+.|+--. ......+.+-+.|+.+.+... +.. +|.+..-|++.+-
T Consensus 209 ~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~---Ipvg~~PhGv~~s 285 (595)
T 1fwx_A 209 AFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRY---IPIANNPHGCNMA 285 (595)
T ss_dssp EEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEE---EEEESSCCCEEEC
T ss_pred EEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEE---EecCCCceEEEEc
Q ss_pred cCcEEEEEecCCCCcccccEEEEECCCCc-----------eEEcccCCCCCCCCcceeEEEeCCEEEEEcccCCCCCccc
Q 010770 136 GNRKIVMYGGWDGKKWLSDVYVLDTISLE-----------WMQLPVTGSVPPPRCGHTATMVEKRLLIYGGRGGGGPIMG 204 (501)
Q Consensus 136 ~~~~iyv~GG~~~~~~~~~~~~yd~~t~~-----------W~~~~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~ 204 (501)
.||+..++.+..... +.+||..+.+ -.... .....+-.|.+..-++.+|+.-...
T Consensus 286 PDGk~v~V~~~~s~~----VsVid~~~~~~~~~~~l~~~~~v~~~---v~vG~gP~h~aF~~dG~aY~t~~ld------- 351 (595)
T 1fwx_A 286 PDKKHLCVAGKLSPT----VTVLDVTRFDAVFYENADPRSAVVAE---PELGLGPLHTAFDGRGNAYTSLFLD------- 351 (595)
T ss_dssp TTSSEEEEECTTSSB----EEEEEGGGHHHHHHSCCCGGGGEEEC---CBCCSCEEEEEECTTSEEEEEETTT-------
T ss_pred CCCCEEEEeCCCCCe----EEEEECcccccccccccCcccceEEE---cCCCCCcceEEECCCCeEEEEEecC-------
Q ss_pred ccccccccccccCCC--------CceEEeecCCCCCCCce-eeEEEE-------eCCEEEEEcCCCCCCCCcccccccCe
Q 010770 205 DLWALKGLIEEENET--------PGWTQLKLPGQAPSSRC-GHTITS-------GGHYLLLFGGHGTGGWLSRYDIYYND 268 (501)
Q Consensus 205 d~~~l~~~~~Yd~~t--------~~W~~~~~~g~~p~~r~-~~s~~~-------~~~~i~v~GG~~~~~~~~~~~~~~~~ 268 (501)
+.+.++|.++ ..+..+. ..+..-. +|..+. .+..+|+.-+.+.+....--......
T Consensus 352 -----sqV~kwdi~~a~~~~~g~~~~~vi~---kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~ 423 (595)
T 1fwx_A 352 -----SQVVKWNIEDAIRAYAGEKVDPIKD---KLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPEN 423 (595)
T ss_dssp -----TEEEEEEHHHHHHHHHTCSCCCEEE---EEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEE
T ss_pred -----CcEEEEEhhHhhhhhcccccceeEE---EeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCc
Q ss_pred EEEEEcCCCceEEcccCCCCCCcccc
Q 010770 269 TIILDRLSAQWKRLPIGNEPPPARAY 294 (501)
Q Consensus 269 v~~yd~~~~~W~~v~~~~~~p~~r~~ 294 (501)
--+||+...+-+.+...+..+.||..
T Consensus 424 ~ql~dis~~~m~lv~d~p~~~ePh~~ 449 (595)
T 1fwx_A 424 DQLIDISGDKMVLVHDGPTFAEPHDA 449 (595)
T ss_dssp EEEEECSSSSCEEEEEEEESSCCCCE
T ss_pred ceEEEcCCCcEEEEEEEcCCCCCCce
No 299
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=26.33 E-value=5.9e+02 Score=26.78 Aligned_cols=86 Identities=12% Similarity=0.110 Sum_probs=51.3
Q ss_pred CCCceEEeecCCCCCCCceeeEEEEe-CCEEEEEcCCCCCCCCccccc-ccCeEEEEEcCCCceEEcccCCCC-CCcccc
Q 010770 218 ETPGWTQLKLPGQAPSSRCGHTITSG-GHYLLLFGGHGTGGWLSRYDI-YYNDTIILDRLSAQWKRLPIGNEP-PPARAY 294 (501)
Q Consensus 218 ~t~~W~~~~~~g~~p~~r~~~s~~~~-~~~i~v~GG~~~~~~~~~~~~-~~~~v~~yd~~~~~W~~v~~~~~~-p~~r~~ 294 (501)
...+|+.+. ..|...+.|.+++. ++.+|+..+..... +.. ....+|+++-...+|+.+...+.. +..+++
T Consensus 230 gG~tW~~~~---~~p~~~~~~~~~~~~~~~l~~~~~d~~g~----y~~~~~g~v~~s~d~G~tW~~i~~~~~~~~~~~~~ 302 (737)
T 2cn3_A 230 GGVTWKAVP---GQPKGLLPHHGVLASNGMLYITYGDTCGP----YDGNGKGQVWKFNTRTGEWIDITPIPYSSSDNRFC 302 (737)
T ss_dssp TTSCCEECT---TCCCSSEEEEEEECTTSEEEEEEESSCCS----SCCSCCEEEEEEETTTCCEEECCSSCTTSTTCCSE
T ss_pred CCCceEECC---CCCCcccceEEEECCCCeEEEEecCCCCc----cccccCceEEEEeCCCCCEEEccCCCCCCcccccc
Confidence 466899887 45555555555553 67888765432110 000 235689999999999998874321 123455
Q ss_pred eEEEEE----CCEEEEEccC
Q 010770 295 HSMTCL----GSLYLLFGGF 310 (501)
Q Consensus 295 ~~~~~~----~~~iyv~GG~ 310 (501)
++.+.+ .+.||+.+..
T Consensus 303 ~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 303 FAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp EEEEEECTTCTTCEEEEEEC
T ss_pred cccEEEcCCCCCEEEEEecc
Confidence 554444 2678877653
No 300
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=23.99 E-value=4.6e+02 Score=24.76 Aligned_cols=81 Identities=12% Similarity=-0.043 Sum_probs=37.2
Q ss_pred CCcEEEEEcccCC----CccCCceEEEEcCCCcEEeceecCCCCCCCCCCCCcceeEEEE-eCCEEEEEccccCCCCCCc
Q 010770 29 GKSKVVVFGGLVD----KRFLSDVVVYDIDNKLWFQPECTGNGSNGQVGPGPRAFHIAVA-IDCHMFIFGGRFGSRRLGD 103 (501)
Q Consensus 29 ~~~~iyv~GG~~~----~~~~~~v~~yd~~t~~W~~l~~~~~~~~~~~~p~~R~~h~~~~-~~~~iyv~GG~~~~~~~~~ 103 (501)
.+..+|+..-..+ +...+.+.+||+.+.+-..--..+..........|+ +.+.. .+..||+..-. ..+.
T Consensus 76 Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~--~~~~spDG~~l~v~n~~----~~~~ 149 (373)
T 2mad_H 76 SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSW--MNANTPNNADLLFFQFA----AGPA 149 (373)
T ss_pred CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCcc--ceEECCCCCEEEEEecC----CCCe
Confidence 3346777653211 123456889999865432211110000000011222 11222 35578876321 1356
Q ss_pred EEEEECCCCeEEE
Q 010770 104 FWVLDTDIWQWSE 116 (501)
Q Consensus 104 ~~~yd~~t~~W~~ 116 (501)
+.++| .+++-..
T Consensus 150 v~viD-~t~~~~~ 161 (373)
T 2mad_H 150 VGLVV-QGGSSDD 161 (373)
T ss_pred EEEEE-CCCCEEe
Confidence 89999 8876543
No 301
>1lts_C Heat-labIle enterotoxin, subunit A; 1.95A {Escherichia coli} SCOP: d.166.1.1 PDB: 1ltt_C* 1ltb_C
Probab=22.93 E-value=47 Score=20.77 Aligned_cols=13 Identities=38% Similarity=0.795 Sum_probs=11.7
Q ss_pred hhHHHHHHHHHHH
Q 010770 444 LLRDYQRLIARHL 456 (501)
Q Consensus 444 ~~~~~~~~~~~~~ 456 (501)
-|++||.+|.|++
T Consensus 15 ~L~~fkk~vKRq~ 27 (41)
T 1lts_C 15 YLREYQSKVKRQI 27 (41)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4789999999998
No 302
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=22.47 E-value=4.7e+02 Score=24.29 Aligned_cols=173 Identities=10% Similarity=0.017 Sum_probs=82.3
Q ss_pred CcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCCceEEcccCCCCCCCCcce
Q 010770 102 GDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISLEWMQLPVTGSVPPPRCGH 181 (501)
Q Consensus 102 ~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~ 181 (501)
..+.++|+.+.+-..... ....-.+++...++++++.|+. +.+.+++..+........ ........
T Consensus 157 ~~i~iwd~~~~~~~~~~~-----~~~~V~~v~fspdg~~l~s~s~------~~~~~~~~~~~~~~~~~~---~~~~~~~v 222 (365)
T 4h5i_A 157 AIMRIIDPSDLTEKFEIE-----TRGEVKDLHFSTDGKVVAYITG------SSLEVISTVTGSCIARKT---DFDKNWSL 222 (365)
T ss_dssp CEEEEEETTTTEEEEEEE-----CSSCCCEEEECTTSSEEEEECS------SCEEEEETTTCCEEEEEC---CCCTTEEE
T ss_pred CEEEEeECCCCcEEEEeC-----CCCceEEEEEccCCceEEeccc------eeEEEEEeccCcceeeee---cCCCCCCE
Confidence 458889999887554332 1112234555567777777652 346778877776554321 11111111
Q ss_pred e-EE-EeCCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE-eCCEEEEEcCCCCCCC
Q 010770 182 T-AT-MVEKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS-GGHYLLLFGGHGTGGW 258 (501)
Q Consensus 182 ~-~~-~~~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~-~~~~i~v~GG~~~~~~ 258 (501)
. +. .-++..++.++...... -.+..+|....................-.++++ -++++++.|+.+
T Consensus 223 ~~v~fspdg~~l~~~s~d~~~~--------~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D---- 290 (365)
T 4h5i_A 223 SKINFIADDTVLIAASLKKGKG--------IVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASND---- 290 (365)
T ss_dssp EEEEEEETTEEEEEEEESSSCC--------EEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETT----
T ss_pred EEEEEcCCCCEEEEEecCCcce--------eEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCC----
Confidence 1 22 22677777776544321 112233444444332210000000011112233 456777777654
Q ss_pred CcccccccCeEEEEEcCCCceEE-cccCCCCCCcccceEEEEE-CCEEEEEccCCC
Q 010770 259 LSRYDIYYNDTIILDRLSAQWKR-LPIGNEPPPARAYHSMTCL-GSLYLLFGGFDG 312 (501)
Q Consensus 259 ~~~~~~~~~~v~~yd~~~~~W~~-v~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~ 312 (501)
..|.+||..+.+-.. +..... . .-.+++.. ++++++.|+.++
T Consensus 291 --------~~V~iwd~~~~~~~~~~~~gH~---~-~V~~v~fSpdg~~laS~S~D~ 334 (365)
T 4h5i_A 291 --------NSIALVKLKDLSMSKIFKQAHS---F-AITEVTISPDSTYVASVSAAN 334 (365)
T ss_dssp --------SCEEEEETTTTEEEEEETTSSS---S-CEEEEEECTTSCEEEEEETTS
T ss_pred --------CEEEEEECCCCcEEEEecCccc---C-CEEEEEECCCCCEEEEEeCCC
Confidence 358899988765322 111111 1 11222222 577778877655
No 303
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=21.51 E-value=4.6e+02 Score=23.86 Aligned_cols=64 Identities=5% Similarity=-0.020 Sum_probs=35.3
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEEEEECCCC
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVYVLDTISL 163 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~ 163 (501)
++.+++.|+.+ ..+.++|+.+++....-. . ....-.+++...++..++.||.++ .+.+||+...
T Consensus 87 ~~~~l~s~s~D-----~~v~lwd~~~~~~~~~~~---~-h~~~v~~v~~sp~~~~l~s~~~d~-----~i~~wd~~~~ 150 (343)
T 2xzm_R 87 ENCFAISSSWD-----KTLRLWDLRTGTTYKRFV---G-HQSEVYSVAFSPDNRQILSAGAER-----EIKLWNILGE 150 (343)
T ss_dssp STTEEEEEETT-----SEEEEEETTSSCEEEEEE---C-CCSCEEEEEECSSTTEEEEEETTS-----CEEEEESSSC
T ss_pred CCCEEEEEcCC-----CcEEEEECCCCcEEEEEc---C-CCCcEEEEEECCCCCEEEEEcCCC-----EEEEEeccCC
Confidence 45566666643 358889998876433221 1 111122334445566777777653 3777787643
No 304
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=21.08 E-value=5.7e+02 Score=24.72 Aligned_cols=147 Identities=11% Similarity=0.042 Sum_probs=73.9
Q ss_pred CCEEEEEccccCCCCCCcEEEEECCCCeEEEEecCCCCCCcCCccEEEEEcCc-EEEEEecCCCCcccccEEEEECCCCc
Q 010770 86 DCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTSFGDLPSPRDFAAASAIGNR-KIVMYGGWDGKKWLSDVYVLDTISLE 164 (501)
Q Consensus 86 ~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~~~~~p~~r~~~~~~~~~~~-~iyv~GG~~~~~~~~~~~~yd~~t~~ 164 (501)
++.||+.--. ..+.++|+.++....+.. ....-...++..++ .||+...... .....++.++.. ..
T Consensus 149 ~g~Lyv~d~~------~~I~~id~~~~~v~~~~~-----~~~~P~~ia~d~~G~~lyvad~~~~-~~~~~v~~~~~~-g~ 215 (430)
T 3tc9_A 149 HNHLYLVGEQ------HPTRLIDFEKEYVSTVYS-----GLSKVRTICWTHEADSMIITNDQNN-NDRPNNYILTRE-SG 215 (430)
T ss_dssp EEEEEEEEBT------EEEEEEETTTTEEEEEEC-----CCSCEEEEEECTTSSEEEEEECCSC-TTSEEEEEEEGG-GT
T ss_pred CCeEEEEeCC------CcEEEEECCCCEEEEEec-----CCCCcceEEEeCCCCEEEEEeCCCC-cccceEEEEeCC-Cc
Confidence 4678887431 679999999988887753 11112233333344 5888764322 122235556643 23
Q ss_pred eEEcccCCCCCCCCcceeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEeecCCCCCCCceeeEEEE
Q 010770 165 WMQLPVTGSVPPPRCGHTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQLKLPGQAPSSRCGHTITS 242 (501)
Q Consensus 165 W~~~~~~~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~~~~g~~p~~r~~~s~~~ 242 (501)
|.... .++....-+.+++. ++.||+.--. -..+.+||+.+..-..+...+....+ ..+++
T Consensus 216 ~~~~~---~l~~~~~p~giavdp~~g~lyv~d~~------------~~~V~~~~~~~~~~~~~~~~~~~~~P---~gia~ 277 (430)
T 3tc9_A 216 FKVIT---ELTKGQNCNGAETHPINGELYFNSWN------------AGQVFRYDFTTQETTPLFTIQDSGWE---FHIQF 277 (430)
T ss_dssp SCSEE---EEEECSSCCCEEECTTTCCEEEEETT------------TTEEEEEETTTTEEEEEEECSSSSCC---EEEEE
T ss_pred eeeee---eeccCCCceEEEEeCCCCEEEEEECC------------CCEEEEEECCCCcEEEEEEcCCCCcc---eeEEE
Confidence 33111 01111222444444 5678876421 14466778887665333311111111 13333
Q ss_pred --eCCEEEEEcCCCCCCCCcccccccCeEEEEEcC
Q 010770 243 --GGHYLLLFGGHGTGGWLSRYDIYYNDTIILDRL 275 (501)
Q Consensus 243 --~~~~i~v~GG~~~~~~~~~~~~~~~~v~~yd~~ 275 (501)
.++.||+.-- ..+.|++++.+
T Consensus 278 ~pdG~~lyv~d~------------~~~~I~~~~~d 300 (430)
T 3tc9_A 278 HPSGNYAYIVVV------------NQHYILRSDYD 300 (430)
T ss_dssp CTTSSEEEEEET------------TTTEEEEEEEE
T ss_pred cCCCCEEEEEEC------------CCCEEEEEeCC
Confidence 3445888653 23568887765
No 305
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=20.84 E-value=4.9e+02 Score=23.89 Aligned_cols=135 Identities=11% Similarity=0.007 Sum_probs=0.0
Q ss_pred eeEEEEeCCEEEEEccccCCCCCCcEEEEECCCCeEEEEec--CCCCCCcCCccEEEEEcCcEEEEEecCCCCcccccEE
Q 010770 79 FHIAVAIDCHMFIFGGRFGSRRLGDFWVLDTDIWQWSELTS--FGDLPSPRDFAAASAIGNRKIVMYGGWDGKKWLSDVY 156 (501)
Q Consensus 79 ~h~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~t~~W~~~~~--~~~~p~~r~~~~~~~~~~~~iyv~GG~~~~~~~~~~~ 156 (501)
...++.-++++|+..-+..... ..++.++ +.+-...+. .........-+++++..++.||+..-.........++
T Consensus 20 ~~va~~~~g~~~v~~~~~~~~~-~~l~~~~--~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 20 GNITLTPDGRLFLSLHQFYQPE-MQVAELT--QDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp EEEEECTTSCEEEEECGGGCCS-CSEEEEE--TTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred ceEEECCCCCEEEEeCCCCCCc-eEEEEEC--CCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Q ss_pred EEECCCCc-eEEcccCCCCCCCCcc-eeEEEe--CCEEEEEcccCCCCCcccccccccccccccCCCCceEEe
Q 010770 157 VLDTISLE-WMQLPVTGSVPPPRCG-HTATMV--EKRLLIYGGRGGGGPIMGDLWALKGLIEEENETPGWTQL 225 (501)
Q Consensus 157 ~yd~~t~~-W~~~~~~~~~p~~r~~-~~~~~~--~~~lyv~GG~~~~~~~~~d~~~l~~~~~Yd~~t~~W~~~ 225 (501)
+||+.+++ -..+........+... ..+++. ++.+|+..-..... ..+.+||+.+.+-..+
T Consensus 97 ~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~---------~~i~v~d~~~g~~~r~ 160 (343)
T 2qe8_A 97 AWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDK---------AALIRVDLQTGLAARV 160 (343)
T ss_dssp EEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGG---------CEEEEEETTTCCEEEE
T ss_pred EEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCC---------CeEEEEECCCCCEEEE
Done!