BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010771
(501 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356538166|ref|XP_003537575.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Glycine max]
Length = 482
Score = 565 bits (1456), Expect = e-158, Method: Compositional matrix adjust.
Identities = 368/515 (71%), Positives = 408/515 (79%), Gaps = 60/515 (11%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FAEPG+P YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKR
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKR----------- 169
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
VRLV DK+ NKPRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERG
Sbjct: 170 ----------VRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERG 219
Query: 238 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER 297
RTVPNWRPRRLGGGLGTTRVGGEEVNQR+SGREQ+ SRS EPR+REDRH DRDRE
Sbjct: 220 RTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQ----QSRSEEPRVREDRHADRDREI 275
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 357
SRERGRD++RERE+S E SH+R RDRDHR+DRHHRDRDR RDR+R+R+R R+R RDR R
Sbjct: 276 SRERGRDKDRERERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRT 335
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRID 417
RDR R+RGRD +RDRE DR +ERDRD YEVGDP DRG SRDR+SDYDR++
Sbjct: 336 RDRDRERGRDRDRDREYDRHRERDRD----------YEVGDP--DRGRSRDRESDYDRVE 383
Query: 418 SKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHD----RYNQYH--DDDNDRY 471
SK HGER++D + EDDRG H YEH R + D D RY+ Y+ DD D Y
Sbjct: 384 SK-----HGERNHD-YEPEDDRG---RHNQYEHGRRHADPDHDPERYDHYNHGDDHGDHY 434
Query: 472 DQM-----EEDDYRYDRATSESRDKERTRDLDREY 501
+Q EDDY RATSES +KER+ D+DREY
Sbjct: 435 NQYRDHDGMEDDYHAGRATSESHEKERSHDVDREY 469
>gi|356496753|ref|XP_003517230.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Glycine
max]
Length = 481
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 356/521 (68%), Positives = 399/521 (76%), Gaps = 73/521 (14%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FA+PGDP YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAQPGDPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKR
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKR----------- 169
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
VRLV DK+TNKPRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERG
Sbjct: 170 ----------VRLVADKDTNKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERG 219
Query: 238 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER 297
RTVPNWRPRRLGGGLGTTRVGGEEVNQR+SGREQ+ SRS EPR+REDRH DRDRE
Sbjct: 220 RTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGREQQ----QSRSEEPRVREDRHSDRDREI 275
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 357
SRER RD+++ERE+S E S++R RDRD R+DR RDR R R+R+R+R R+RDR R RD
Sbjct: 276 SRERVRDKDKERERSREHSNERVRDRDQREDR--HHRDRDRTRDRDRERDRDRDRGRDRD 333
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRID 417
R R R+RGRD +RDRE DR +ERDRD YEVG + DRG SRDR+S Y+R++
Sbjct: 334 RARDRERGRDRDRDREYDRHRERDRD----------YEVG--ETDRGRSRDRESHYNRVE 381
Query: 418 SKHERDRHGERDYDPTDQEDDRG---WYDH--------HENYEHHRGY------GDHDRY 460
SK HGER++D + EDDRG Y+H H+ EH+ Y GDH Y
Sbjct: 382 SK-----HGERNHD-YEPEDDRGRQNQYEHGHRHADPDHDTTEHYDPYNHGDDRGDH--Y 433
Query: 461 NQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDREY 501
NQY D D EDDY RATSES +KER+ D+DREY
Sbjct: 434 NQYPDPDR------MEDDYHAGRATSESHEKERSHDVDREY 468
>gi|255561192|ref|XP_002521608.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
gi|223539286|gb|EEF40879.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Ricinus
communis]
Length = 506
Score = 534 bits (1375), Expect = e-149, Method: Compositional matrix adjust.
Identities = 265/327 (81%), Positives = 286/327 (87%), Gaps = 21/327 (6%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAV+ TK QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKP
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFV+ FAEPGDP YAPPV++AETP +RRARIH+LRLEKGAEKAAEE
Sbjct: 61 PPEKRKCPPYTGMAQFVTQFAEPGDPEYAPPVQEAETPTQRRARIHQLRLEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L+KYDP++DPN+SGDPYKTLFVARL+YETTES+IKREFESYGPIKR
Sbjct: 121 LQKYDPNSDPNISGDPYKTLFVARLNYETTESRIKREFESYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRL+TDK NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV
Sbjct: 167 -------VRLITDKAANKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
PNWRPRRLGGGLGTTRVGGEEVNQR SGRE + S G SRS EPR REDR+ +RDRE+SRE
Sbjct: 220 PNWRPRRLGGGLGTTRVGGEEVNQRNSGRELQQSGGSSRSEEPRPREDRYNERDREKSRE 279
Query: 301 RGRDREREREKSLELSHDRPRDRDHRD 327
RGRDRE+EREKS E SH+RPRDRDH++
Sbjct: 280 RGRDREKEREKSREHSHERPRDRDHKE 306
>gi|356538168|ref|XP_003537576.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Glycine max]
Length = 465
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 354/515 (68%), Positives = 392/515 (76%), Gaps = 77/515 (14%)
Query: 1 MGDYN---DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLE 57
MGD N DAFMRNQNAAVQARTKAQNR+NVLQLKLIGQSHPTGLTANLLKLFEPR PLE
Sbjct: 1 MGDNNSNNDAFMRNQNAAVQARTKAQNRSNVLQLKLIGQSHPTGLTANLLKLFEPRPPLE 60
Query: 58 YKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKA 117
YKPPPEKRKCPPL+GMAQFVS FAEPG+P YAPPV + ETP ++RARIHKLRLEKGA KA
Sbjct: 61 YKPPPEKRKCPPLSGMAQFVSKFAEPGEPEYAPPVPETETPAQKRARIHKLRLEKGAAKA 120
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
AEEL+KYDPHNDPNVSGDPYKTLFVA+LSYETTES+IKREFESYGPIKR
Sbjct: 121 AEELEKYDPHNDPNVSGDPYKTLFVAKLSYETTESRIKREFESYGPIKR----------- 169
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
VRLV DK+ NKPRGYAFIEY+HTRDMKAAYKQADGRK+DGRRVLVDVERG
Sbjct: 170 ----------VRLVADKDINKPRGYAFIEYLHTRDMKAAYKQADGRKIDGRRVLVDVERG 219
Query: 238 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER 297
RTVPNWRPRRLGGGLGTTRVGGEEVNQR+SGR RDRE
Sbjct: 220 RTVPNWRPRRLGGGLGTTRVGGEEVNQRHSGR---------------------SSRDREI 258
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 357
SRERGRD++RERE+S E SH+R RDRDHR+DRHHRDRDR RDR+R+R+R R+R RDR R
Sbjct: 259 SRERGRDKDRERERSREHSHERVRDRDHREDRHHRDRDRNRDRDRDRERDRDRGRDRDRT 318
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRID 417
RDR R+RGRD +RDRE DR +ERDRD YEVGDP DRG SRDR+SDYDR++
Sbjct: 319 RDRDRERGRDRDRDREYDRHRERDRD----------YEVGDP--DRGRSRDRESDYDRVE 366
Query: 418 SKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHD----RYNQYH--DDDNDRY 471
SK HGER++D + EDDRG H YEH R + D D RY+ Y+ DD D Y
Sbjct: 367 SK-----HGERNHD-YEPEDDRG---RHNQYEHGRRHADPDHDPERYDHYNHGDDHGDHY 417
Query: 472 DQM-----EEDDYRYDRATSESRDKERTRDLDREY 501
+Q EDDY RATSES +KER+ D+DREY
Sbjct: 418 NQYRDHDGMEDDYHAGRATSESHEKERSHDVDREY 452
>gi|449451513|ref|XP_004143506.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
gi|449504870|ref|XP_004162317.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cucumis
sativus]
Length = 505
Score = 516 bits (1328), Expect = e-143, Method: Compositional matrix adjust.
Identities = 258/324 (79%), Positives = 281/324 (86%), Gaps = 21/324 (6%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPPLTGMAQFVS+FAEP DP YAPPV+K ETP ERRARIH LR+EKGAEKAAEE
Sbjct: 61 PPEKRKCPPLTGMAQFVSNFAEPDDPEYAPPVQKGETPTERRARIHLLRIEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L KY +DPNV+GDPYKTLFVARL+YETTES+IKREFESYGPIKR
Sbjct: 121 LPKYLERDDPNVTGDPYKTLFVARLNYETTESRIKREFESYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRL+TDK T KP+GYAFIEYMH RDMKAAYKQADGRK+DGRRVLVDVERGRTV
Sbjct: 167 -------VRLITDKVTGKPKGYAFIEYMHKRDMKAAYKQADGRKIDGRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
PNWRPRRLGGGLGTTRVGGEE +QR+SGREQ+ S PSRS EPR+REDRHG+RDRE+S +
Sbjct: 220 PNWRPRRLGGGLGTTRVGGEENSQRHSGREQQQSGAPSRSEEPRVREDRHGERDREKSYD 279
Query: 301 RGRDREREREKSLELSHDRPRDRD 324
+GRDRER+REKS E SH+R ++RD
Sbjct: 280 KGRDRERDREKSREHSHERSKERD 303
>gi|297735173|emb|CBI17535.3| unnamed protein product [Vitis vinifera]
Length = 504
Score = 503 bits (1294), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/298 (81%), Positives = 261/298 (87%), Gaps = 21/298 (7%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDA MRN NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQF S+FAEPG+P Y+PPV+KAETP +RRARIHKLRLEKGAEKA EE
Sbjct: 61 PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRL+TDKET+KPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTV
Sbjct: 167 -------VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 298
PNWRPRRLGGGLGTTRVGGEEVN +YSGREQ+P GP RS EPR REDRHGDRDRE+S
Sbjct: 220 PNWRPRRLGGGLGTTRVGGEEVNPKYSGREQQPVGGPPRSEEPRTREDRHGDRDREKS 277
>gi|225430786|ref|XP_002270129.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Vitis
vinifera]
Length = 514
Score = 502 bits (1293), Expect = e-139, Method: Compositional matrix adjust.
Identities = 244/298 (81%), Positives = 261/298 (87%), Gaps = 21/298 (7%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDA MRN NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDALMRNNNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQF S+FAEPG+P Y+PPV+KAETP +RRARIHKLRLEKGAEKA EE
Sbjct: 61 PPEKRKCPPYTGMAQFASNFAEPGEPEYSPPVQKAETPAQRRARIHKLRLEKGAEKATEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YGPIKR
Sbjct: 121 FQKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRL+TDKET+KPRGYAFIEYMHTRDMKAAYKQADGRKLD RRVLVDVERGRTV
Sbjct: 167 -------VRLITDKETSKPRGYAFIEYMHTRDMKAAYKQADGRKLDNRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 298
PNWRPRRLGGGLGTTRVGGEEVN +YSGREQ+P GP RS EPR REDRHGDRDRE+S
Sbjct: 220 PNWRPRRLGGGLGTTRVGGEEVNPKYSGREQQPVGGPPRSEEPRTREDRHGDRDREKS 277
>gi|357518361|ref|XP_003629469.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523491|gb|AET03945.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 502
Score = 493 bits (1269), Expect = e-137, Method: Compositional matrix adjust.
Identities = 243/298 (81%), Positives = 261/298 (87%), Gaps = 22/298 (7%)
Query: 6 DAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKR 65
D +RNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKPPPEKR
Sbjct: 3 DPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKR 62
Query: 66 KCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYD 125
KCPPLTGMAQFVS FAEPG+P Y+PPV ETP ERRAR+HKLRLEKGA KAAEEL+KYD
Sbjct: 63 KCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKYD 122
Query: 126 PHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCD 185
PHNDPN+SGDPYKTLFVARLSYETTES+IKREFESYG IKR
Sbjct: 123 PHNDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKR------------------- 163
Query: 186 EKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
VRLVTD E+NKPRGYAFIEY+HTRDMKAAYKQADGRK++GRRVLVDVERGRTVPNWRP
Sbjct: 164 --VRLVTDAESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWRP 221
Query: 246 RRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGR 303
RRLGGGLGTTRVGG+EVNQR+SGREQ+ S GPSRS EPR+RE+RH DRDRE+SRERG+
Sbjct: 222 RRLGGGLGTTRVGGDEVNQRHSGREQQQS-GPSRSEEPRVREERHADRDREKSRERGK 278
>gi|84468434|dbj|BAE71300.1| putative U1 snRNP 70K protein [Trifolium pratense]
Length = 506
Score = 486 bits (1250), Expect = e-134, Method: Compositional matrix adjust.
Identities = 240/294 (81%), Positives = 255/294 (86%), Gaps = 22/294 (7%)
Query: 5 NDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEK 64
ND +RNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLT NLLKLFEPR PLEYKPPPEK
Sbjct: 6 NDPLLRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKPPPEK 65
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RKCPPLTGMAQFVS FAEPG+P Y+PPV ETP ERRAR+HKLRLEKGA KAAEEL+KY
Sbjct: 66 RKCPPLTGMAQFVSKFAEPGEPEYSPPVPVVETPAERRARVHKLRLEKGAAKAAEELEKY 125
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
DPH DPN+SGDPYKTLFVARLSYETTES+IKREFESYG IKR
Sbjct: 126 DPHTDPNISGDPYKTLFVARLSYETTESRIKREFESYGAIKR------------------ 167
Query: 185 DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
VRLVTD E+NKPRGYAFIEY+HTRDMKAAYKQADGRK++GRRVLVDVERGRTVPNWR
Sbjct: 168 ---VRLVTDTESNKPRGYAFIEYLHTRDMKAAYKQADGRKIEGRRVLVDVERGRTVPNWR 224
Query: 245 PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERS 298
PRRLGGGLGTTRVGGEEVNQR+SGREQ+ S GPSRS EPR+REDRH DRDRE+S
Sbjct: 225 PRRLGGGLGTTRVGGEEVNQRHSGREQQQS-GPSRSEEPRVREDRHVDRDREKS 277
>gi|338762844|gb|AEI98631.1| hypothetical protein 111O18.18 [Coffea canephora]
Length = 532
Score = 474 bits (1220), Expect = e-131, Method: Compositional matrix adjust.
Identities = 265/337 (78%), Positives = 291/337 (86%), Gaps = 18/337 (5%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY+DA MRNQNAAVQARTKAQNRANV+QLKLIGQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDYSDALMRNQNAAVQARTKAQNRANVMQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FA+PGD YAPPV+KAETPVERRARIHK+RLE+GA+KAAEE
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAQPGDAEYAPPVQKAETPVERRARIHKIRLEEGAKKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLI------CNSCNG 174
L+KYDP+NDPN+SGDPYKTLFVARL+YETTES+IKREFE+YG IKR+ C G
Sbjct: 121 LEKYDPNNDPNISGDPYKTLFVARLNYETTESRIKREFEAYGAIKRVGIKEHRECALVIG 180
Query: 175 GDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
VRLVTDK TNKPRGYAFIEY+HTRDMKAAYKQADG+K+D RRVLVDV
Sbjct: 181 F----------WFVRLVTDKSTNKPRGYAFIEYVHTRDMKAAYKQADGKKIDNRRVLVDV 230
Query: 235 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 294
ERGRTVPNWRPRRLGGGLGTTRVGGEE+NQRYSGREQ G SRS EPR+R+DR DR+
Sbjct: 231 ERGRTVPNWRPRRLGGGLGTTRVGGEELNQRYSGREQVQPGGASRSEEPRMRDDR--DRE 288
Query: 295 RERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH 331
RE+SRER RDRERERE+S E S DR RDR+HR+DRHH
Sbjct: 289 REKSRERVRDRERERERSQERSQDRTRDREHREDRHH 325
>gi|15229825|ref|NP_190636.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|13633916|sp|Q42404.1|RU17_ARATH RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|1255711|gb|AAD12773.1| small nuclear ribonucleoprotein [Arabidopsis thaliana]
gi|1354469|gb|AAD12775.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|6561970|emb|CAB62436.1| U1 snRNP 70K protein [Arabidopsis thaliana]
gi|14532500|gb|AAK63978.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|20334806|gb|AAM16264.1| AT3g50670/T3A5_50 [Arabidopsis thaliana]
gi|332645171|gb|AEE78692.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 427
Score = 461 bits (1185), Expect = e-127, Method: Compositional matrix adjust.
Identities = 280/497 (56%), Positives = 331/497 (66%), Gaps = 81/497 (16%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTV
Sbjct: 167 -------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERS 298
PNWRPRRLGGGLGT+RV GGEE+ EQ+P S+S EP R RE +RE+S
Sbjct: 220 PNWRPRRLGGGLGTSRVGGGEEIVG-----EQQPQGRTSQSEEPSRPRE------EREKS 268
Query: 299 RERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRERERDRGRERDRDRT 355
RE+G++RER R ELSH++PR+R R+D+HHRDRD+ R
Sbjct: 269 REKGKERERSR----ELSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDR 324
Query: 356 RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
DRD R ++ DRDR+R++ERD + + G SR+RD++Y
Sbjct: 325 GDRD------RRDRDRGRDRTSRDHDRDRSRKKERDYEGGEYE-HEGGGRSRERDAEY-- 375
Query: 416 IDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRYDQME 475
GE E+ RG+Y+ + GD DRY+ RYD+ME
Sbjct: 376 ---------RGE-------PEETRGYYEDDQ--------GDTDRYSH-------RYDKME 404
Query: 476 EDDYRYDRATSESRDKE 492
EDD+RY+R S+ E
Sbjct: 405 EDDFRYEREYKRSKRSE 421
>gi|297819752|ref|XP_002877759.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
gi|297323597|gb|EFH54018.1| hypothetical protein ARALYDRAFT_485414 [Arabidopsis lyrata subsp.
lyrata]
Length = 430
Score = 452 bits (1163), Expect = e-124, Method: Compositional matrix adjust.
Identities = 279/509 (54%), Positives = 326/509 (64%), Gaps = 102/509 (20%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D FMRN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFMRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQADG+K+DGRRVLVDVERGRTV
Sbjct: 167 -------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADGQKIDGRRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-RIREDRHGDRDRERS 298
PNWRPRRLGGGLGT+RV GGEE+ EQ+P S+S EP R RE +RE+S
Sbjct: 220 PNWRPRRLGGGLGTSRVGGGEEIVG-----EQQPQGRTSQSEEPSRPRE------EREKS 268
Query: 299 RERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRERERDRGRERDRDRT 355
RE+G++RERER + LSH++PR+R R+D+HHRDRD+ R
Sbjct: 269 REKGKERERERSRE--LSHEQPRERSRDRPREDKHHRDRDQGGRDRDRDSRRDRDRTRDR 326
Query: 356 RDRDRGRDRGRDHERDREKDRDKERDRDR------------TRERERDRDYEVGDPDRDR 403
DRDR R+ DRD+ R +DR R RE+D +Y+ G+P+
Sbjct: 327 GDRDRRDRDRGRDRTSRDHDRDRSRKKDRDYEGGEYEHEGGGRSREKDAEYKRGEPEETH 386
Query: 404 GYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQY 463
GY +E D+ GD DRY+
Sbjct: 387 GY--------------YEEDQ------------------------------GDTDRYSH- 401
Query: 464 HDDDNDRYDQMEEDDYRYDRATSESRDKE 492
RYD+MEEDD+RY+R S+ E
Sbjct: 402 ------RYDKMEEDDFRYEREYKRSKRSE 424
>gi|68036648|gb|AAY84878.1| U1 snRNP-interacting 70 kDa protein [Triticum aestivum]
Length = 481
Score = 426 bits (1096), Expect = e-116, Method: Compositional matrix adjust.
Identities = 268/475 (56%), Positives = 323/475 (68%), Gaps = 37/475 (7%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY +A MRNQ+A VQ+R KAQ+RAN+LQLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGNAMMRNQDAGVQSRVKAQSRANLLQLKLIGQSHPTGLTTNLLKLFEPRPPLEHKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
P EKRK P +GM+QFVS FAEPGDP YAPPV ET E++ RI +L+LE+GA K AEE
Sbjct: 61 PLEKRKLPAYSGMSQFVSRFAEPGDPEYAPPVPTCETRAEKKDRIRQLKLEEGAAKVAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L+KYDP NDPNV+GDPYKTLFVARL YET+E K+KR+FE+YGPIKR
Sbjct: 121 LQKYDPQNDPNVTGDPYKTLFVARLGYETSEQKVKRDFEAYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRLVTDK TNKPRGYAF+EY HTRDMK+AYKQADGRK+D +RVLVDVERGRTV
Sbjct: 167 -------VRLVTDKVTNKPRGYAFVEYAHTRDMKSAYKQADGRKVDNKRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
PNWRPRRLGGGLG++R+GGE+ Q++S REQ+ + G RS EPR + DRDRE+SR+
Sbjct: 220 PNWRPRRLGGGLGSSRIGGEDAAQKHSAREQQNAAGRPRSEEPRRDDRSA-DRDREKSRD 278
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 360
R EK+ E SHDR RDRD R+DRHH RDRDR
Sbjct: 279 R-VRERDRDEKTRERSHDRARDRDPREDRHHHRDRERTRDRDRERDQERDRGRDRRDRDR 337
Query: 361 GRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKH 420
+D RDR++DRD++R+R R R+RDRDYE ++D G RD DY R +H
Sbjct: 338 HKDH----GRDRDQDRDRKRERSHGRGRDRDRDYERASHEQDPG----RDRDYKRARHEH 389
Query: 421 ERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYG--DHD---RYNQYHDDDNDR 470
ER D D + E ++HH ++E + GYG HD R+ Y DD + +
Sbjct: 390 ERGHLQASDADYGNGEPGYNQHEHHRSHEQY-GYGLDGHDRSKRHEHYRDDSHSK 443
>gi|357146958|ref|XP_003574171.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 478
Score = 420 bits (1079), Expect = e-115, Method: Compositional matrix adjust.
Identities = 262/455 (57%), Positives = 319/455 (70%), Gaps = 29/455 (6%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY +A MRNQ+A VQ+RTKAQ+RAN+LQLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGNAMMRNQDAGVQSRTKAQSRANLLQLKLIGQSHPTGLTTNLLKLFEPRPPLEHKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
P EKRK P TGMAQFVS FAEPGD YAPPV ET E++ RI +L+LE+GA K AEE
Sbjct: 61 PVEKRKLPAYTGMAQFVSRFAEPGDTEYAPPVPTCETRAEKKDRIRQLKLEQGAAKVAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L+KYDP NDPNV+GDPYKTLFVARL+YET+E K+KR+FE+YGPIKR
Sbjct: 121 LQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKVKRDFEAYGPIKR-------------- 166
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
VRLVTDK TNKPRGYAF+EY+HTRDMK+AYKQADGRK+D +RVLVDVERGRTV
Sbjct: 167 -------VRLVTDKVTNKPRGYAFVEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGRTV 219
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
PNWRPRRLGGGLG++R+GGE+ +Q++S REQ+ + G RS E R+DR DRDRE+SRE
Sbjct: 220 PNWRPRRLGGGLGSSRIGGEDASQKHSAREQQNAAGRPRSEE-PRRDDRPADRDREKSRE 278
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 360
R E++ E SHDR RDRD R+++HH RDRDR
Sbjct: 279 R-VRERDRDERTRERSHDRTRDRDPREEKHHHRDRERTRDRDRERDQERDRGRDRRDRDR 337
Query: 361 GRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKH 420
+D RDR++DRD++R+R R R+RDRDYE ++D +RDRD DY R +H
Sbjct: 338 HKDH----GRDRDQDRDRKRERSHGRGRDRDRDYEHVSHEQDP--ARDRDRDYKRARHEH 391
Query: 421 ERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYG 455
+R E D D + + + HE Y + +G+G
Sbjct: 392 DRGHFQESDADYGNGDPSYNQHRSHEQYGYSQGHG 426
>gi|357145731|ref|XP_003573746.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Brachypodium distachyon]
Length = 475
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 254/455 (55%), Positives = 300/455 (65%), Gaps = 34/455 (7%)
Query: 1 MGDYNDAFMR-NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGDY +A MR N + VQ R K RANV QLKL+GQ HPTGLT NLLKLFE R PLE+K
Sbjct: 1 MGDYGNAMMRGNPDGGVQGRPKGVARANVQQLKLMGQGHPTGLTPNLLKLFEARPPLEHK 60
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP EKRK P TGMAQFVS FAEPGD YAPPV ET E++ RI K +LE+GA K AE
Sbjct: 61 PPVEKRKLPAYTGMAQFVSRFAEPGDQEYAPPVPTCETRAEKKDRIQKFKLEQGAAKVAE 120
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR 179
+L KYDP +DPN +GDPYKTLFVARL+YET+ES++KREFE+YGPIKR
Sbjct: 121 DLLKYDPQSDPNTTGDPYKTLFVARLNYETSESRVKREFEAYGPIKR------------- 167
Query: 180 DGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D +RVLVDVERGRT
Sbjct: 168 --------VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGRT 219
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSR 299
VPNWRPRRLGGGLG++R+ G+ +Q+ S REQ PS G RS EP+ + R DRDRE+SR
Sbjct: 220 VPNWRPRRLGGGLGSSRISGQNADQKPSAREQ-PSAGRPRSEEPKRDDRRV-DRDREKSR 277
Query: 300 ERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRD 359
ER EK E SHDR R+RD R++RHH + RD
Sbjct: 278 ER-VRERDRDEKPRERSHDRTRERDPREERHHHRDRDRTRDRDRGRDREKDHGRDRDRRD 336
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK 419
R RDR R + DREKDR + DR R R R+R+RD+E +R+R + +RD+DY + K
Sbjct: 337 RDRDRDRGRDHDREKDRGRSHDRHRERGRDRERDHERPSHERERSHLHERDADYANGEPK 396
Query: 420 HERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGY 454
H+R +D D G Y+ HE + H Y
Sbjct: 397 HDRKL--------SDYGQDYG-YNQHEQHRSHEAY 422
>gi|222612343|gb|EEE50475.1| hypothetical protein OsJ_30528 [Oryza sativa Japonica Group]
Length = 476
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 216/285 (75%), Gaps = 12/285 (4%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR G
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGF--- 176
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 177 -----IRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 231
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 232 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 275
>gi|218184050|gb|EEC66477.1| hypothetical protein OsI_32563 [Oryza sativa Indica Group]
Length = 485
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 190/285 (66%), Positives = 216/285 (75%), Gaps = 12/285 (4%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR G
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRAWGFYILGF--- 176
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 177 -----IRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 231
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 232 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 275
>gi|87130529|gb|ABD23908.1| U1 small nuclear ribonucleoprotein 70K [Oryza sativa Japonica
Group]
Length = 463
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 215/285 (75%), Gaps = 25/285 (8%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKR------------ 167
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 168 ---------VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 218
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 219 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 262
>gi|115480914|ref|NP_001064050.1| Os10g0115600 [Oryza sativa Japonica Group]
gi|78707654|gb|ABB46629.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113638659|dbj|BAF25964.1| Os10g0115600 [Oryza sativa Japonica Group]
Length = 463
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 189/285 (66%), Positives = 215/285 (75%), Gaps = 25/285 (8%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKR------------ 167
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 168 ---------VRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRVLVDVERGR 218
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 219 TVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 262
>gi|326504184|dbj|BAJ90924.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 473
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 228/306 (74%), Gaps = 24/306 (7%)
Query: 1 MGDYNDAFMR-NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGD+ +A R N + +Q R K RANV QLKL+GQ HPTGLT NLLKLFE R LE+K
Sbjct: 1 MGDHGNAMTRGNPDGGLQGRPKGVPRANVQQLKLMGQGHPTGLTPNLLKLFEARPMLEHK 60
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP +KRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI KL+LE+GA+K A+
Sbjct: 61 PPVQKRKLPAYTGMAQFVSRFAEPGDPEYAPPVPTCETKAEKKDRIRKLKLEQGADKVAK 120
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR 179
EL+ Y+P +DPN + DPYKTLFVARL+YET+ES++KREFE+YGPIKR
Sbjct: 121 ELQNYNPQSDPNTTSDPYKTLFVARLNYETSESRVKREFEAYGPIKR------------- 167
Query: 180 DGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
VRLVTDK+TNKPRGYAFIEYMHTRDMK AYKQADGRK+D +RVLVDVERGRT
Sbjct: 168 --------VRLVTDKDTNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNKRVLVDVERGRT 219
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSR 299
VPNWRPRRLGGGLG++R+ G +Q+ RE PS G RS EP+ R D DRDRE+SR
Sbjct: 220 VPNWRPRRLGGGLGSSRICGASADQKPPAREA-PSVGRPRSEEPK-RGDSRVDRDREKSR 277
Query: 300 ERGRDR 305
ER R+R
Sbjct: 278 ERVRER 283
>gi|14028993|gb|AAK52534.1|AC078891_3 Putative U1 small nuclear ribonucleoprotein [Oryza sativa Japonica
Group]
Length = 491
Score = 373 bits (958), Expect = e-100, Method: Compositional matrix adjust.
Identities = 192/293 (65%), Positives = 221/293 (75%), Gaps = 13/293 (4%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR + N GD +
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRQ-TSLKNVGDGT 178
Query: 179 RDGKPCD--------EKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 230
+ VRLVTDKETNKPRGYAFIEYMHTRDMK AYKQADGRK+D RRV
Sbjct: 179 TYLQAWGFYILGFIRLLVRLVTDKETNKPRGYAFIEYMHTRDMKNAYKQADGRKVDNRRV 238
Query: 231 LVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
LVDVERGRTVPNWRPRRLGGGLG++R+GGE Q+ S R+Q+ + G RS EP
Sbjct: 239 LVDVERGRTVPNWRPRRLGGGLGSSRIGGENAEQKLSTRDQQHA-GRPRSEEP 290
>gi|413934408|gb|AFW68959.1| U1 snRNP [Zea mays]
Length = 491
Score = 354 bits (908), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 187/285 (65%), Positives = 213/285 (74%), Gaps = 26/285 (9%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVSHFAEP DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKR
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKR------------ 166
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVT+K+T+KPRGYAFIEY+HTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 167 ---------VRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GG + +++ S REQ+ G RS EP
Sbjct: 218 TVPNWRPRRLGGGLGSSRMGGTDTDKKDSTREQQQG-GRPRSEEP 261
>gi|49343272|gb|AAT64945.1| U1 snRNP [Zea mays]
gi|49343276|gb|AAT64946.1| U1 snRNP [Zea mays]
Length = 491
Score = 350 bits (898), Expect = 8e-94, Method: Compositional matrix adjust.
Identities = 186/285 (65%), Positives = 211/285 (74%), Gaps = 26/285 (9%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVSHFAEP DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQFVSHFAEPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKR
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKR------------ 166
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVT+K+T+KPRGYAFIEY+HTRDMK AY ADGRK+D RRVLVDVERGR
Sbjct: 167 ---------VRLVTEKDTSKPRGYAFIEYVHTRDMKNAYPAADGRKVDNRRVLVDVERGR 217
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG+TR+GG + +++ S REQ+ G RS EP
Sbjct: 218 TVPNWRPRRLGGGLGSTRMGGTDTDKKDSTREQQQG-GRPRSEEP 261
>gi|242041407|ref|XP_002468098.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
gi|241921952|gb|EER95096.1| hypothetical protein SORBIDRAFT_01g039540 [Sorghum bicolor]
Length = 484
Score = 350 bits (898), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 185/285 (64%), Positives = 212/285 (74%), Gaps = 26/285 (9%)
Query: 1 MGDYNDAF--MRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR N + R + Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEY
Sbjct: 1 MGDYGHGGGQMRG-NPDSRPRGQGQ-RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEY 58
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQ+VSHFA P DP YAPPV K ET E++ARI +LE+GA K A
Sbjct: 59 KPPLEKRKLPAYTGMAQYVSHFATPEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVA 118
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIKR
Sbjct: 119 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKR------------ 166
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
VRLVT+K+T+KPRGYAFIEY+HTRDMK AYKQADGRK+D RRVLVDVERGR
Sbjct: 167 ---------VRLVTEKDTSKPRGYAFIEYVHTRDMKNAYKQADGRKVDNRRVLVDVERGR 217
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
TVPNWRPRRLGGGLG++R+GG + +++ S REQ+ G RS EP
Sbjct: 218 TVPNWRPRRLGGGLGSSRMGGADTDKKDSTREQQHG-GRPRSEEP 261
>gi|242034815|ref|XP_002464802.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
gi|241918656|gb|EER91800.1| hypothetical protein SORBIDRAFT_01g026920 [Sorghum bicolor]
Length = 486
Score = 345 bits (886), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 180/284 (63%), Positives = 211/284 (74%), Gaps = 24/284 (8%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQN-RANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYK 59
MGDY + + +RT+ Q R NV QLKL+GQ HPTGLT NLLKLFEPR PLEYK
Sbjct: 1 MGDYGHGGGQMRGNP-DSRTRGQGQRTNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEYK 59
Query: 60 PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAE 119
PP EKRK P TGMAQFVSHFA+ DP YAPPV K ET E++ARI +LE+GA K AE
Sbjct: 60 PPLEKRKLPAYTGMAQFVSHFAKSEDPEYAPPVPKCETRAEKKARIRNNKLEQGAAKIAE 119
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR 179
EL+KYDP +DPN +GDPYKTLFVARL+YET+E +IKREFE YGPIK
Sbjct: 120 ELQKYDPQSDPNATGDPYKTLFVARLNYETSEQRIKREFEGYGPIKW------------- 166
Query: 180 DGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
VRLVT+K+T+KPRGYAFIEY+HTRDMK+AYKQADGRK+D +RVLVDVERGRT
Sbjct: 167 --------VRLVTEKDTSKPRGYAFIEYVHTRDMKSAYKQADGRKVDNKRVLVDVERGRT 218
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEP 283
VPNWRPRRLGGGLG++R+GG + +++ S R Q+ G RS EP
Sbjct: 219 VPNWRPRRLGGGLGSSRMGGADADKKDSTRGQQHG-GRPRSEEP 261
>gi|224094751|ref|XP_002310221.1| predicted protein [Populus trichocarpa]
gi|222853124|gb|EEE90671.1| predicted protein [Populus trichocarpa]
Length = 179
Score = 308 bits (789), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 145/167 (86%), Positives = 154/167 (92%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRN NAAV+ K QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLE+KP
Sbjct: 1 MGDYNDAFMRNPNAAVRGSAKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP GMAQFVSHFAEPGDP YAPP+++AETP ER+ARIH RLEKGAEKAAEE
Sbjct: 61 PPEKRKCPPYLGMAQFVSHFAEPGDPEYAPPIKEAETPAERKARIHAARLEKGAEKAAEE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
L+KYDP NDPNVSGDPYKTLFVARLSYETTES+IKREFESYGPIKR+
Sbjct: 121 LQKYDPTNDPNVSGDPYKTLFVARLSYETTESRIKREFESYGPIKRV 167
>gi|30693345|ref|NP_850676.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
gi|1354466|gb|AAD12776.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|1354468|gb|AAD12774.1| U1 snRNP 70K truncated protein [Arabidopsis thaliana]
gi|332645172|gb|AEE78693.1| U1 small nuclear ribonucleoprotein-70K [Arabidopsis thaliana]
Length = 204
Score = 286 bits (733), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/167 (80%), Positives = 149/167 (89%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGD D F+RN NAAVQAR K QNRANVLQLKL+GQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDSGDPFLRNPNAAVQARAKVQNRANVLQLKLMGQSHPTGLTNNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP TGMAQFVS+FAEPGDP YAPP + E P ++R RIHKLRLEKG EKAAE+
Sbjct: 61 PPEKRKCPPYTGMAQFVSNFAEPGDPEYAPPKPEVELPSQKRERIHKLRLEKGVEKAAED 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR+
Sbjct: 121 LKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKRV 167
>gi|168015720|ref|XP_001760398.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688412|gb|EDQ74789.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 197
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 129/167 (77%), Positives = 143/167 (85%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY DA+MR + RTKAQNRA V QLKLIGQSHPTGLT NLLKLFEPR PLEYKP
Sbjct: 1 MGDYGDAYMRKDASGPPGRTKAQNRATVQQLKLIGQSHPTGLTTNLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP G+ QFV HFAEPGDP YAPPV K ETP +RRARIH+LRLE+GA+KA +E
Sbjct: 61 PPEKRKCPPYLGIGQFVQHFAEPGDPEYAPPVTKGETPTQRRARIHQLRLEEGAKKAVDE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
L KYDP NDP++ GDPYKTLFVAR+SYETTE+KI+REFESYGPIKR+
Sbjct: 121 LSKYDPTNDPDIEGDPYKTLFVARISYETTENKIRREFESYGPIKRV 167
>gi|118488424|gb|ABK96027.1| unknown [Populus trichocarpa]
Length = 313
Score = 273 bits (697), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 204/330 (61%), Positives = 230/330 (69%), Gaps = 51/330 (15%)
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
+V DK +NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG
Sbjct: 1 MVADKVSNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 60
Query: 250 GGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDR--ER 307
GGLGTTRVGGEEVNQR+ GRE + S G SRS EPR REDRH +R+RE SR+RGRDR ER
Sbjct: 61 GGLGTTRVGGEEVNQRHPGREVQQSGGLSRSEEPRTREDRHTEREREVSRDRGRDRDKER 120
Query: 308 EREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRD 367
EREKS E SHDRPRDRDHR+DRH+RDR+R RDR R+RDR R+R RDR
Sbjct: 121 EREKSHERSHDRPRDRDHREDRHNRDRERERDRGRDRDRTRDRGRDRG------------ 168
Query: 368 HERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGE 427
R+ +RD+ERD R R R+R+RDYEVGD R + RD +SKHERDRHGE
Sbjct: 169 ----RDYERDRERDHGRDRARDRERDYEVGDHYHGRSHDRD--------ESKHERDRHGE 216
Query: 428 RDYDPTDQEDDRGWYD---------------HHENYEHHRG---------YGDHDRYNQY 463
RD D + EDD GWY+ H+++YEH R GDH R + Y
Sbjct: 217 RDNDHAEPEDDMGWYEQPEQGQKLPDAEDDQHYDHYEHRRSRGRYDHMDVQGDHGRSDLY 276
Query: 464 HDDDNDRYDQMEEDDYRYDRATSESRDKER 493
H D D D MEEDDY YDR TSESR+ R
Sbjct: 277 HGTDRD-GDHMEEDDYHYDRGTSESRENRR 305
>gi|168061033|ref|XP_001782496.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666049|gb|EDQ52715.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 181
Score = 272 bits (696), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 128/169 (75%), Positives = 142/169 (84%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDY DA+MR + RTK QNRA V QLKLIGQSHPTGLT NLLKLFEPR PLE+KP
Sbjct: 1 MGDYGDAYMRKDASGPPGRTKTQNRATVQQLKLIGQSHPTGLTTNLLKLFEPRPPLEFKP 60
Query: 61 PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE 120
PPEKRKCPP G+ QFV HFAEPGDP YAPPV K ETP +RRARIH+LRLE+GA+KA +E
Sbjct: 61 PPEKRKCPPYQGIGQFVQHFAEPGDPEYAPPVTKGETPTQRRARIHQLRLEEGAKKALDE 120
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLIC 169
L KYDP NDP++ GDPYKTLFVAR+SYETTE KI+REFESYGPIKR+ C
Sbjct: 121 LSKYDPTNDPDIEGDPYKTLFVARISYETTEHKIRREFESYGPIKRVSC 169
>gi|302798547|ref|XP_002981033.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
gi|300151087|gb|EFJ17734.1| hypothetical protein SELMODRAFT_58751 [Selaginella moellendorffii]
Length = 156
Score = 247 bits (631), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/155 (77%), Positives = 133/155 (85%), Gaps = 1/155 (0%)
Query: 14 AAVQARTKA-QNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTG 72
A + AR KA QNRA V QLKLIGQSHPTGLTANLLKLFEPR PLEYKPPPEKR PP G
Sbjct: 1 AGMPARPKAAQNRATVQQLKLIGQSHPTGLTANLLKLFEPRPPLEYKPPPEKRNLPPYHG 60
Query: 73 MAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV 132
++QFV HFAEPGDP Y+PP+ KAETP +RRARIH +RLEKGAEKA E+L+KYDP D N+
Sbjct: 61 ISQFVQHFAEPGDPEYSPPIVKAETPSQRRARIHSVRLEKGAEKATEDLEKYDPQTDSNI 120
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
GDPYKTLFVAR+SYETTE KIKREFE+YGPIKR+
Sbjct: 121 EGDPYKTLFVARISYETTEHKIKREFEAYGPIKRV 155
>gi|302791513|ref|XP_002977523.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
gi|300154893|gb|EFJ21527.1| hypothetical protein SELMODRAFT_106721 [Selaginella moellendorffii]
Length = 233
Score = 234 bits (596), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 124/218 (56%), Positives = 150/218 (68%), Gaps = 28/218 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE---KAETP 98
LT NLL+LF+P P+EYK P EK++ PP TG+AQFVS F L E K ET
Sbjct: 1 LTPNLLRLFDPPPPVEYKEPIEKKELPPYTGIAQFVSCFEN----LSIDDQESQAKVETT 56
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ERRAR++ RLEKG EK AEE+ KYDP +DPN GDPYKTLF+ +LSY+TTE +++REF
Sbjct: 57 AERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSYDTTEHRLQREF 116
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
E YGP+KR VRLV DK T+KPRGYAF+E+ H++DMK AYK
Sbjct: 117 ERYGPVKR---------------------VRLVHDKHTDKPRGYAFVEFYHSQDMKNAYK 155
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG K+D RR+LVDVERGRTV +W P+RLGGGLG R
Sbjct: 156 HADGTKIDNRRILVDVERGRTVKDWLPKRLGGGLGNAR 193
>gi|87130531|gb|ABD23909.1| U1 small nuclear ribonucleoprotein 70K splice variant 1 [Oryza
sativa Japonica Group]
gi|87130533|gb|ABD23910.1| U1 small nuclear ribonucleoprotein 70K splice variant 2 [Oryza
sativa Japonica Group]
Length = 220
Score = 230 bits (587), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/175 (65%), Positives = 135/175 (77%), Gaps = 5/175 (2%)
Query: 1 MGDYNDAFMRNQ--NAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEY 58
MGDY MR +Q+RTK Q R NV QLKL+GQ HPTGLT NLLKLFEPR PL++
Sbjct: 1 MGDYGSGMMRGNPDGGGMQSRTKGQ-RVNVQQLKLMGQGHPTGLTPNLLKLFEPRPPLDF 59
Query: 59 KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAA 118
KPP EKRK P TGMAQFVS FAEPGDP YAPPV ET E++ RI K +L++GA K A
Sbjct: 60 KPPVEKRKLPAYTGMAQFVSQFAEPGDPEYAPPVPTCETKAEKKDRIRKSKLDQGAAKVA 119
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCN 173
EEL+KYDP +DPN +GDPYKTLFVARL+YET+E ++KREFE+YGPIKR+ ++C
Sbjct: 120 EELQKYDPQSDPNATGDPYKTLFVARLNYETSEHRVKREFEAYGPIKRV--STCG 172
>gi|322618|pir||S28147 U1 snRNP 70K protein - Arabidopsis thaliana (fragment)
Length = 303
Score = 229 bits (583), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 167/342 (48%), Positives = 203/342 (59%), Gaps = 57/342 (16%)
Query: 107 KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKR 166
KLRLEKG EKAAE+LKKYDP+NDPN +GDPYKTLFV+RL+YE++ESKIKREFESYGPIKR
Sbjct: 1 KLRLEKGVEKAAEDLKKYDPNNDPNATGDPYKTLFVSRLNYESSESKIKREFESYGPIKR 60
Query: 167 LICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLD 226
V LVTD+ TNKP+GYAFIEYMHTRDMKAAYKQAD ++L
Sbjct: 61 ---------------------VHLVTDQLTNKPKGYAFIEYMHTRDMKAAYKQADDKRLT 99
Query: 227 GRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQEPSRGPSRSAEP-R 284
+ ER P RPRRLGG LGT+RV GGEE+ EQ+P S+S EP R
Sbjct: 100 AEEFWLMWER-ENRPKLRPRRLGGELGTSRVGGGEEI-----AGEQQPQGRTSQSEEPSR 153
Query: 285 IREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRE 341
RE +RE+SRE+G++RER R ELSH++PR+R R+D+HHRDRD+
Sbjct: 154 PRE------EREKSREKGKERERSR----ELSHEQPRERSRDRPREDKHHRDRDQGGRDR 203
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDR------------TRERE 389
R DRDR R+ DRD+ R +DR R RE
Sbjct: 204 DRDSRRDRDRTRDRGDRDRRDRDRGRDRTSRDHDRDRSRKKDRDYEGGEYEHEGGGRSRE 263
Query: 390 RDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 431
RD +Y G+P+ RGY D D DR H D+ E D++
Sbjct: 264 RDAEYR-GEPEETRGYYEDDQGDTDRYS--HRYDKMEEDDFE 302
>gi|281209808|gb|EFA83976.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Polysphondylium
pallidum PN500]
Length = 432
Score = 224 bits (570), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 150/234 (64%), Gaps = 24/234 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
L NLL +F R PLEY P K + P +G+A F S F+ P PP K E+ +
Sbjct: 5 LPPNLLLMFVARPPLEYIAPIPKPQLPNYSGLAAFKSSFSADPPP---PPATKIESRDQI 61
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
+ R + ++++ EK + LK++DPH++ +GDPYKTLFV+R+SY+T+ESK+K EF Y
Sbjct: 62 KQRKIEQKVQQNTEKNLKSLKQWDPHSNTKSTGDPYKTLFVSRISYKTSESKLKNEFSQY 121
Query: 162 GPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD 221
GPIK K+RLVTD+ T KP+GYAFIE+ RDMK AYKQAD
Sbjct: 122 GPIK---------------------KIRLVTDQVTGKPKGYAFIEFEKERDMKIAYKQAD 160
Query: 222 GRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSR 275
G+K+D RRVLVD+ERGR + NW+PR+ GGGLG TR GG +VNQ +SGRE R
Sbjct: 161 GQKIDDRRVLVDIERGRVIKNWKPRKYGGGLGNTRAGGADVNQTFSGREMSEQR 214
>gi|162458369|ref|NP_001105268.1| U1 snRNP [Zea mays]
gi|49343280|gb|AAT64947.1| U1 snRNP [Zea mays]
gi|49343293|gb|AAT64948.1| U1 snRNP [Zea mays]
gi|413934406|gb|AFW68957.1| U1 snRNP isoform 1 [Zea mays]
gi|413934407|gb|AFW68958.1| U1 snRNP isoform 2 [Zea mays]
Length = 193
Score = 219 bits (557), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/143 (74%), Positives = 119/143 (83%)
Query: 25 RANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPG 84
R NV QLKL+GQ HPTGLT NLLKLFEPR PLEYKPP EKRK P TGMAQFVSHFAEP
Sbjct: 25 RPNVQQLKLMGQIHPTGLTPNLLKLFEPRPPLEYKPPLEKRKLPAYTGMAQFVSHFAEPE 84
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
DP YAPPV K ET E++ARI +LE+GA K AEEL+KYDP +DPN +GDPYKTLFVAR
Sbjct: 85 DPEYAPPVPKCETRAEKKARIRNNKLEQGAAKVAEELQKYDPQSDPNATGDPYKTLFVAR 144
Query: 145 LSYETTESKIKREFESYGPIKRL 167
L+YET+E +IKREFE YGPIKR+
Sbjct: 145 LNYETSEQRIKREFEGYGPIKRV 167
>gi|198435747|ref|XP_002131795.1| PREDICTED: similar to ribonucleoprotein antigen [Ciona
intestinalis]
Length = 461
Score = 209 bits (533), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/237 (50%), Positives = 150/237 (63%), Gaps = 31/237 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK------RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L NLL LF PR + YK P + R+ P TG+ F F +P D PP +
Sbjct: 5 LPPNLLALFAPRDAIPYKAPLQPLTWEKDRERAPYTGLGNFSHLFEDPKD---TPPPTRG 61
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
ET E++ R K +LEK AE+ EE+K +DPHNDPN GD +KTLFV+R++Y+TTESK++
Sbjct: 62 ETKEEKKTRKIKEKLEKRAEEIEEEIKGWDPHNDPNAGGDAFKTLFVSRINYDTTESKLR 121
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
REFE+YG I+ KV +V D T KPRGYAF+E+ RDM
Sbjct: 122 REFETYGKIR---------------------KVTIVKDVATGKPRGYAFVEFDRERDMHT 160
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 272
AYK ADG+K+DGRRVLVDVERGRTV WRPRR GGGLG+TR G ++ N+R S RE+E
Sbjct: 161 AYKSADGKKIDGRRVLVDVERGRTVKGWRPRRFGGGLGSTRAGPDDSNRR-SEREKE 216
>gi|146197791|dbj|BAF57614.1| snRNP70K protein [Dugesia japonica]
Length = 348
Score = 198 bits (504), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 145/233 (62%), Gaps = 27/233 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L NLL LF R P+ + P P+ + P TG+AQ+V F +P + P K ET
Sbjct: 10 LPPNLLALFAARDPIPFAIPIERPKHHRPLPYTGIAQYVKLFEDPSETPIPP---KVETR 66
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
E+R R K + E+ A K ++L ++P+ P+ + DPYKTLFVAR++Y+TTE+KI+REF
Sbjct: 67 EEKRERKRKEKAEQIAYKVEQDLALWNPNEIPSGTKDPYKTLFVARINYDTTENKIRREF 126
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
E YGPIK +R+V + NKPRGY FIEY H RDM AAYK
Sbjct: 127 EGYGPIK---------------------TIRMVKNAMNNKPRGYCFIEYEHERDMHAAYK 165
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 271
ADG+K+DG RVLVDVER RTV NWRPRRLGGGLG TR G E N +Y+ RE+
Sbjct: 166 NADGKKIDGHRVLVDVERARTVRNWRPRRLGGGLGNTRRGPPEQNSKYTTREE 218
>gi|302845893|ref|XP_002954484.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
gi|300260156|gb|EFJ44377.1| hypothetical protein VOLCADRAFT_106420 [Volvox carteri f.
nagariensis]
Length = 393
Score = 197 bits (502), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 120/266 (45%), Positives = 153/266 (57%), Gaps = 55/266 (20%)
Query: 11 NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCP-P 69
N+ AAV+A ++ + H TGL LL LF PRA L +K K P
Sbjct: 13 NRQAAVKALKES-----------VQTGHKTGLPPQLLSLFNPRAQLPLVTDVKKPKIKLP 61
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEK---------------------AETPVERRARIHKL 108
TG+A +V FA GDP Y PP + ET +E++ R+ K
Sbjct: 62 YTGLAAYVKEFAGEGDPDYQPPRNEDRPPSPRLFRNRELAAQARVDTETKIEKKIRLTKW 121
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLI 168
+LE+ +A E+ K +DP+ DP + GDPYKT+ VARLSY+ T+ K++REFE +GPIKR
Sbjct: 122 KLEEAEREAREKSKTFDPNKDPKIEGDPYKTIIVARLSYDVTDKKLRREFEEFGPIKR-- 179
Query: 169 CNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 228
VR+VTDK+ KPRGYAFIE+ H DMK AYK ADG+K++GR
Sbjct: 180 -------------------VRIVTDKQ-GKPRGYAFIEFEHKADMKEAYKAADGKKIEGR 219
Query: 229 RVLVDVERGRTVPNWRPRRLGGGLGT 254
RVLVDVERGRTV NW+PRRLGGGLG
Sbjct: 220 RVLVDVERGRTVENWKPRRLGGGLGA 245
>gi|303276150|ref|XP_003057369.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
gi|226461721|gb|EEH59014.1| U1 small nuclear ribonucleoprotein [Micromonas pusilla CCMP1545]
Length = 472
Score = 193 bits (491), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/236 (50%), Positives = 147/236 (62%), Gaps = 23/236 (9%)
Query: 38 HPTGLTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
H TGLT +LL LF PR P+EY P P K +K P+TG+A +V F +P D P EK E
Sbjct: 92 HQTGLTPSLLALFVPRPPVEYMPAPAKPKKTQPMTGVAAYVDKFTDPADDPPPAPKEKKE 151
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIK 155
T E++ R E+ A E ++K+DP DP DPYKTLFV RLSY+ ESK++
Sbjct: 152 TKEEKKLRRRMAAEERNARALEEAIEKWDPKEDPKAKDSDPYKTLFVGRLSYDVDESKLR 211
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
REFE +GP+K VR+V D ET KPRGYAFIEY DMK
Sbjct: 212 REFEQWGPVK---------------------SVRVVEDVETGKPRGYAFIEYNRESDMKT 250
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 271
AYKQADGR+++ +RV+VD ERGRTVP+W+PRRLGGGLG TR G + N SGR+Q
Sbjct: 251 AYKQADGRRIENKRVVVDAERGRTVPDWKPRRLGGGLGRTRKGAKHENSLVSGRDQ 306
>gi|281348370|gb|EFB23954.1| hypothetical protein PANDA_006289 [Ailuropoda melanoleuca]
Length = 438
Score = 192 bits (488), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 117/234 (50%), Positives = 146/234 (62%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRL G + G +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLEPGAPGLKSGHADVNIRHSGRD 214
>gi|384252045|gb|EIE25522.1| hypothetical protein COCSUDRAFT_61728 [Coccomyxa subellipsoidea
C-169]
Length = 443
Score = 190 bits (482), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 121/273 (44%), Positives = 150/273 (54%), Gaps = 54/273 (19%)
Query: 9 MRNQNAAVQARTKAQNRANV-LQLKLIGQSHPTGLTANLLKLFEPRAP------LEYKPP 61
M ++ A+ Q N+ +LK H TGL LL+LFEP P + +PP
Sbjct: 1 MDSKAASAQGNPALANKLEAERKLKEGISGHKTGLPKKLLELFEPLPPPARLTDIPKRPP 60
Query: 62 PEKRKCPPLTGMAQFVSHFAEPGDP---------------------LYAPPVEKAETPVE 100
K P L G+AQ V+ FAEPGD + A ET E
Sbjct: 61 ----KLPYL-GIAQHVALFAEPGDEEYEPPPEVPRPPSPRRFRNPEMTAQARVDYETKAE 115
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
++ R+ ++ E E LK +DP DP GDP+KTLFVAR+SY+ TE K+KREFE
Sbjct: 116 KKTRVSTQKIAGAKESIEEGLKIWDPAKDPLAEGDPFKTLFVARVSYDATEKKLKREFEE 175
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 220
YGP+KR VRLVT K++ KPRGYAF+E+ H DMK AYK A
Sbjct: 176 YGPVKR---------------------VRLVTQKDSGKPRGYAFVEFEHKNDMKTAYKMA 214
Query: 221 DGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 253
DGRK++GRRV+VDVERGRTVPNWRPRRLGGG G
Sbjct: 215 DGRKIEGRRVVVDVERGRTVPNWRPRRLGGGKG 247
>gi|325190173|emb|CCA24652.1| hypothetical protein TRIADDRAFT_51837 [Albugo laibachii Nc14]
Length = 305
Score = 189 bits (481), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/230 (48%), Positives = 143/230 (62%), Gaps = 27/230 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
L ++ LFE APL + P KRK PP +G++ F+S F + DP P +ETP ER
Sbjct: 25 LPMHIRALFEANAPLTHLPQLTKRKMPPYSGISDFISQFEQ--DP--PPQRLLSETPKER 80
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPH-NDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
+ R+ ++ K EK +E+ K+DP D + D YKTLFV R+SYETTE +++ EFE
Sbjct: 81 KERLRAEQIAKHQEKLKQEIAKWDPAVQDDRKTEDAYKTLFVGRISYETTEKQLRHEFEQ 140
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 220
+G IK +RLV + E K RGYAFIEY H D+KAAYK A
Sbjct: 141 FGAIKH---------------------IRLV-EGEEGKSRGYAFIEYEHEADLKAAYKFA 178
Query: 221 DGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
DG+K+DGRRV+VDVERGRTV WRPR+ GGG+G TR GG +VN +YSGRE
Sbjct: 179 DGKKIDGRRVVVDVERGRTVHEWRPRKFGGGIGETRKGGPDVNVKYSGRE 228
>gi|410905871|ref|XP_003966415.1| PREDICTED: uncharacterized protein LOC101066791 [Takifugu rubripes]
Length = 467
Score = 189 bits (479), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TRDERLERKRREKIERRQTVLETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K T KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYSKRTAKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN ++SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGR 213
>gi|159479638|ref|XP_001697897.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158273995|gb|EDO99780.1| U1 small nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 394
Score = 188 bits (478), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 135/322 (41%), Positives = 169/322 (52%), Gaps = 69/322 (21%)
Query: 11 NQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKC-PP 69
N+ AAV+A ++ + H TGL LL LF PR L +K K
Sbjct: 13 NRQAAVKALKES-----------VQTGHKTGLPPPLLTLFSPRQQLPLADGLKKAKINQK 61
Query: 70 LTGMAQFVSHFAEPGDPLYAPP----------------------VEKAETPVERRARIHK 107
TGMA +V FA GDP Y PP VE ET E++ R+ K
Sbjct: 62 YTGMASYVKEFASEGDPEYQPPRNPDCPPSPRLFRNPELRIQSRVE-TETKTEKKIRLTK 120
Query: 108 LRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
+LE+ +A E K +DP+ DP + GDPYKT+ VARLS++ TE K++REFE YGP+KR
Sbjct: 121 WKLEEAEREAKERAKTFDPNKDPKIEGDPYKTILVARLSFDVTEKKLRREFEEYGPVKR- 179
Query: 168 ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDG 227
VRLV DK K RGYAF+EY H DMK AYK ADG+K++G
Sbjct: 180 --------------------VRLVMDK-NGKSRGYAFVEYEHKADMKEAYKAADGKKIEG 218
Query: 228 RRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE 287
RRVLVDVERGRTV NW+PRRLGGGLG G E + R++ + P+ A P +
Sbjct: 219 RRVLVDVERGRTVENWKPRRLGGGLGAP---GRE--PKAPKRQKPGALLPTPIAAPPV-- 271
Query: 288 DRHGDRDRERSRERGRDRERER 309
DR R+RE RDR R
Sbjct: 272 -----DDRPRAREYDRDRSEPR 288
>gi|291222252|ref|XP_002731131.1| PREDICTED: small nuclear ribonucleoprotein 70kDa polypeptide (RNP
antigen)-like, partial [Saccoglossus kowalevskii]
Length = 402
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 125/186 (67%), Gaps = 22/186 (11%)
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
DP PP + ET ER R K + E+ A++ EE +DP+ +P GD +KTLFVAR
Sbjct: 1 DPKDTPPPTRVETKEERLERKRKEKNEEIAQRIQEECGSWDPNANPRF-GDAFKTLFVAR 59
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
++Y+T+ESK++REFESYGPI NS +R+V ET KPRGYAF
Sbjct: 60 INYDTSESKLRREFESYGPI-----NS----------------IRMVQSVETGKPRGYAF 98
Query: 205 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQ 264
IEY H RDM +AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG+TR GG +VN
Sbjct: 99 IEYEHERDMHSAYKYADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGSTRKGGADVNI 158
Query: 265 RYSGRE 270
R+SGRE
Sbjct: 159 RHSGRE 164
>gi|307103245|gb|EFN51507.1| hypothetical protein CHLNCDRAFT_140193 [Chlorella variabilis]
Length = 277
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 126/205 (61%), Gaps = 42/205 (20%)
Query: 71 TGMAQFVSHFAEPGDP---------------LYAPPVEKA------ETPVERRARIHKLR 109
TG+AQ+VSHF E GDP ++ P E+ VE+ R+ + R
Sbjct: 33 TGIAQYVSHFVERGDPEYEPPPPETQPPPPRIFRNPEMPTQARVDIESKVEKDIRVRQER 92
Query: 110 LEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLIC 169
++ A + E LK +DP DPNV GDP+KTLFV+RLSY+ TE K+KREFE YGPIKR
Sbjct: 93 QQRAARQREENLKSWDPSKDPNVEGDPFKTLFVSRLSYDVTERKLKREFEEYGPIKR--- 149
Query: 170 NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRR 229
+RLV +K + KPRGYAFIEY H DMK AYK ADGRK++ RR
Sbjct: 150 ------------------IRLVHNKNSGKPRGYAFIEYEHKNDMKQAYKMADGRKIEDRR 191
Query: 230 VLVDVERGRTVPNWRPRRLGGGLGT 254
VLVDVERGRTVP+WRPRR GGG G+
Sbjct: 192 VLVDVERGRTVPHWRPRRFGGGKGS 216
>gi|375332101|gb|AFA52590.1| hypothetical protein [Vaucheria litorea]
Length = 312
Score = 185 bits (470), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 137/215 (63%), Gaps = 26/215 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
L +L +F+PR PL +KPP KR P +TG+ ++ F + + PP+ ETP +R
Sbjct: 24 LPPDLKPMFDPRPPLLWKPPINKRVAPYVTGLVKYKDVF----EKIPPPPIIPYETPKQR 79
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
AR+ + ++ + K E+KK++P DPN +GD YKTLFVA +SY+T+E K++REFE Y
Sbjct: 80 HARLREAKIRENEAKIEREIKKWNPKKDPNATGDAYKTLFVANMSYDTSEKKLRREFEQY 139
Query: 162 GPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD 221
G IK K+RLV D E ++PRGYAFIEY DM AYK+AD
Sbjct: 140 GQIK---------------------KIRLVNDLE-DQPRGYAFIEYEREEDMHMAYKKAD 177
Query: 222 GRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
GRK+D RR+LVDVERGRTV NWRPRR GGGLG +R
Sbjct: 178 GRKVDSRRLLVDVERGRTVRNWRPRRFGGGLGESR 212
>gi|339240627|ref|XP_003376239.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316975057|gb|EFV58516.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 294
Score = 185 bits (469), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 120/260 (46%), Positives = 147/260 (56%), Gaps = 40/260 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP K +K P +G+A+F+ F P D PP K ET
Sbjct: 5 LPPNLLALFAPRDPLPYLPPIAKLSFEKKRAPYSGVAKFIHEFENPND---TPPPVKVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E K + + ++P + S DP+KTLFVARLSY+TTE+K++RE
Sbjct: 62 REERIERKRRERAELQNYKIEQGIATWNPSANDKASTDPFKTLFVARLSYDTTETKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK K+ ++TD T K RGYAFIEY H DM AAY
Sbjct: 122 FEVYGPIK---------------------KIYMITDIITGKSRGYAFIEYEHEADMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
K ADG+K+D RRVLVDVERGRTV NW PRRLGGGLG TR R++ P+
Sbjct: 161 KHADGKKIDKRRVLVDVERGRTVKNWLPRRLGGGLGNTR------------RDRPPAGSI 208
Query: 278 SRSAEPRIREDRHGDRDRER 297
S + R+ GDR R+R
Sbjct: 209 SHDDDDRMMYSSSGDRYRDR 228
>gi|432871355|ref|XP_004071924.1| PREDICTED: uncharacterized protein LOC101174750 [Oryzias latipes]
Length = 469
Score = 183 bits (465), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 152/233 (65%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLEKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKIERRQGEVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K T KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYNKGTGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV W PRRLGGGLG TR GG +VN ++SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGADVNIKHSGR 213
>gi|348538876|ref|XP_003456916.1| PREDICTED: hypothetical protein LOC100701048 [Oreochromis
niloticus]
Length = 470
Score = 181 bits (460), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 125/233 (53%), Positives = 153/233 (65%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P +G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLVKLPHEKHHNQPYSGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKIERRQAVVETELKLWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K+T KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYNKKTGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN ++SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGR 213
>gi|301765009|ref|XP_002917959.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Ailuropoda melanoleuca]
Length = 476
Score = 181 bits (459), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 124/275 (45%), Positives = 156/275 (56%), Gaps = 49/275 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL-------GGGLGT------TRVGGEEVN 263
YK ADG+K+DGRRVLVDVERGRTV WRPRRL G LG +G +
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLVLVESLCFGVLGAKWLGVGPGLGAVVLP 220
Query: 264 QRYSGREQEPSRG----PSRSAEPRIREDRHGDRD 294
+++ P+RG P SA+ I RH RD
Sbjct: 221 SKHACEGPTPARGAPHFPCLSADVNI---RHSGRD 252
>gi|108742141|gb|AAI17603.1| Snrnp70 protein [Danio rerio]
Length = 339
Score = 179 bits (455), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 114/238 (47%), Positives = 140/238 (58%), Gaps = 32/238 (13%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K+T KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYNKKTGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
YK ADG+K+DGRRVLVDVERGRTV WRP L +G GEE S E +
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPGDL---VGVLVAQGEEAQMSTSSTLAETT 215
>gi|390368097|ref|XP_781203.3| PREDICTED: uncharacterized protein LOC575726 [Strongylocentrotus
purpuratus]
Length = 500
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 109/232 (46%), Positives = 146/232 (62%), Gaps = 28/232 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP PE+++ +G++ +V F +P D PP + ET
Sbjct: 5 LPPNLLALFAPREPIRYLPPLDKLPEEKRTDGYSGISSYVQLFEDPAD---TPPPARGET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R R K + E +K E++++D H++ + + + +KTLF+AR++Y+TTESK++RE
Sbjct: 62 REEKRLRKMKEKEEMCKQKLENEVEEWDAHSNASATSNAFKTLFIARVNYDTTESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FESYGPIK + + D T KP+GYAFIEY H RDM +AY
Sbjct: 122 FESYGPIKM---------------------ISIAHDINTGKPKGYAFIEYAHERDMHSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
K ADG+K+D RRVLVDVER RTV W PRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 KYADGKKIDSRRVLVDVERARTVKGWTPRRLGGGLGGTRRGGPDVNSRHSGR 212
>gi|392495108|gb|AFM74217.1| U1 small nuclear ribonucleoprotein 70 kD [Spirometra
erinaceieuropaei]
Length = 297
Score = 179 bits (454), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 112/262 (42%), Positives = 149/262 (56%), Gaps = 46/262 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC---PPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L NLL LF PR P+ + PP EK K P TG+AQF+ F +P + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHKHHRKLPYTGVAQFLGEFEDPSE---TPAPARIETR 61
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ER+ R + + E+ K ++L ++P +PN +G+PY TLFVARL+Y+T+E K++REF
Sbjct: 62 EERKERKRREKQEQANYKLEQDLALWNPKKNPNATGNPYNTLFVARLNYDTSEHKLRREF 121
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
+ YGPIKR + ++ D T KPRGYAFIE+ H RDM AA K
Sbjct: 122 DVYGPIKR---------------------ISMIKDIATGKPRGYAFIEFEHERDMHAANK 160
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS 278
A+ RK+DG R+L D+ERGRT P+WRPRRLG GLG +R GPS
Sbjct: 161 DANNRKIDGHRILTDIERGRTRPDWRPRRLGKGLGKSR------------------SGPS 202
Query: 279 RSAEPRIREDRHGDRDRERSRE 300
S+ P IR+DR G R R+
Sbjct: 203 DSSRP-IRDDRDGFGSRGSGRD 223
>gi|298712969|emb|CBJ26871.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 319
Score = 176 bits (447), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/230 (43%), Positives = 138/230 (60%), Gaps = 32/230 (13%)
Query: 34 IGQSHPT--GLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFV-----SHFAEPGDP 86
+G+ P + + +FEP PLE+K KRK P + G+A + ++ E G P
Sbjct: 13 MGKGGPAIQMMEGAMRAMFEPPPPLEFKKSVCKRKPPTVEGVAAMLKGKGAANLFEKGVP 72
Query: 87 LYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLS 146
PP EK ETP ++ ARI + + E +++ K++P +DP GD YKTLF+A++S
Sbjct: 73 ---PPPEKFETPRQKHARIAAAKKKTDEEGLKDKISKWNPKDDPKTKGDAYKTLFIAKIS 129
Query: 147 YETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIE 206
Y+TTE K++REFE +G I + +R+V D E KPRGYAF+E
Sbjct: 130 YDTTEKKLRREFEQFGRI---------------------QSIRMVQD-EDGKPRGYAFVE 167
Query: 207 YMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
Y + DM+ AYK+ DGRK+DGRRVLVDVERGRTV NW PRR GGGLG +R
Sbjct: 168 YENEDDMRVAYKRGDGRKIDGRRVLVDVERGRTVRNWLPRRFGGGLGDSR 217
>gi|383420989|gb|AFH33708.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 176 bits (446), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|51468002|ref|NP_001003875.1| U1 small nuclear ribonucleoprotein 70 kDa [Danio rerio]
gi|49619089|gb|AAT68129.1| U1 small ribonucleoprotein 70kd [Danio rerio]
Length = 495
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K+T KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYNKKTGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN ++SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRD 214
>gi|327275957|ref|XP_003222738.1| PREDICTED: hypothetical protein LOC100559599 [Anolis carolinensis]
Length = 439
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 152/233 (65%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P +G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYSGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVESELKMWDPHNDTNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYMVYNKHSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|440906344|gb|ELR56614.1| U1 small nuclear ribonucleoprotein 70 kDa, partial [Bos grunniens
mutus]
Length = 222
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|390479248|ref|XP_002762385.2| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa-like [Callithrix jacchus]
Length = 575
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 142 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAXYIREFEDPRD---APPPTRAE 198
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 199 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 258
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 259 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 297
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 298 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 350
>gi|426389521|ref|XP_004061168.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Gorilla
gorilla gorilla]
Length = 437
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|383408701|gb|AFH27564.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|355756025|gb|EHH59772.1| hypothetical protein EGM_09962 [Macaca fascicularis]
Length = 255
Score = 176 bits (445), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|410340663|gb|JAA39278.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 428
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|383408703|gb|AFH27565.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 437
Score = 176 bits (445), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|297277576|ref|XP_002801385.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 2
[Macaca mulatta]
gi|337445|gb|AAA36573.1| ribonucleoprotein antigen [Homo sapiens]
gi|119572835|gb|EAW52450.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_e [Homo sapiens]
gi|380815838|gb|AFE79793.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384948960|gb|AFI38085.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
Length = 428
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|432099339|gb|ELK28596.1| U1 small nuclear ribonucleoprotein 70 kDa [Myotis davidii]
Length = 438
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|354493110|ref|XP_003508687.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Cricetulus griseus]
gi|344247885|gb|EGW03989.1| U1 small nuclear ribonucleoprotein 70 kDa [Cricetulus griseus]
Length = 445
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|149055933|gb|EDM07364.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_c [Rattus norvegicus]
gi|187469313|gb|AAI67051.1| Snrp70 protein [Rattus norvegicus]
Length = 451
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|67846113|ref|NP_033250.3| U1 small nuclear ribonucleoprotein 70 kDa [Mus musculus]
gi|83305641|sp|Q62376.2|RU17_MOUSE RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|74144840|dbj|BAE27392.1| unnamed protein product [Mus musculus]
gi|74221620|dbj|BAE21515.1| unnamed protein product [Mus musculus]
gi|124297316|gb|AAI32021.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|124298068|gb|AAI31995.1| Small nuclear ribonucleoprotein 70 (U1) [Mus musculus]
gi|148690898|gb|EDL22845.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
gi|148690901|gb|EDL22848.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_a
[Mus musculus]
Length = 448
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|355703760|gb|EHH30251.1| hypothetical protein EGK_10871 [Macaca mulatta]
Length = 437
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|29568103|ref|NP_003080.2| U1 small nuclear ribonucleoprotein 70 kDa [Homo sapiens]
gi|380503890|ref|NP_001181761.2| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|297277574|ref|XP_001112732.2| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like isoform 1
[Macaca mulatta]
gi|332856471|ref|XP_001156213.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
troglodytes]
gi|397486481|ref|XP_003814356.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 1 [Pan
paniscus]
gi|397486483|ref|XP_003814357.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
paniscus]
gi|402906263|ref|XP_003915922.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Papio anubis]
gi|410054233|ref|XP_003953602.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 2 [Pan
troglodytes]
gi|410054235|ref|XP_003953603.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa isoform 3 [Pan
troglodytes]
gi|13635663|sp|P08621.2|RU17_HUMAN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|315583599|pdb|3PGW|S Chain S, Crystal Structure Of Human U1 Snrnp
gi|315583608|pdb|3PGW|L Chain L, Crystal Structure Of Human U1 Snrnp
gi|337444|gb|AAA36572.1| ribonucleoprotein antigen [Homo sapiens]
gi|337447|gb|AAA03001.1| small ribonucleoprotein 70 kd protein [Homo sapiens]
gi|683580|emb|CAA59278.1| 68 kDa (U1) ribonucleoprotein [Homo sapiens]
gi|12654935|gb|AAH01315.1| Small nuclear ribonucleoprotein 70kDa (U1) [Homo sapiens]
gi|119572831|gb|EAW52446.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|119572833|gb|EAW52448.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_b [Homo sapiens]
gi|208965530|dbj|BAG72779.1| small nuclear ribonucleoprotein 70kDa polypeptide [synthetic
construct]
gi|380783881|gb|AFE63816.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|384941956|gb|AFI34583.1| U1 small nuclear ribonucleoprotein 70 kDa [Macaca mulatta]
gi|410265194|gb|JAA20563.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410295940|gb|JAA26570.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
gi|410340661|gb|JAA39277.1| small nuclear ribonucleoprotein 70kDa (U1) [Pan troglodytes]
Length = 437
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|403299222|ref|XP_003940388.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Saimiri
boliviensis boliviensis]
Length = 438
Score = 175 bits (444), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|444705757|gb|ELW47148.1| U1 small nuclear ribonucleoprotein 70 kDa [Tupaia chinensis]
Length = 440
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|73948009|ref|XP_541503.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Canis lupus
familiaris]
Length = 439
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|395858380|ref|XP_003801549.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Otolemur
garnettii]
Length = 439
Score = 175 bits (443), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|225734047|pdb|3CW1|K Chain K, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734056|pdb|3CW1|6 Chain 6, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734065|pdb|3CW1|7 Chain 7, Crystal Structure Of Human Spliceosomal U1 Snrnp
gi|225734074|pdb|3CW1|8 Chain 8, Crystal Structure Of Human Spliceosomal U1 Snrnp
Length = 216
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|348559532|ref|XP_003465570.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Cavia
porcellus]
Length = 440
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|74140671|dbj|BAB29263.3| unnamed protein product [Mus musculus]
gi|74153179|dbj|BAB27701.3| unnamed protein product [Mus musculus]
Length = 248
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|343961429|dbj|BAK62304.1| U1 small nuclear ribonucleoprotein 70 kDa [Pan troglodytes]
Length = 251
Score = 175 bits (443), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|335289940|ref|XP_003356024.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Sus
scrofa]
Length = 437
Score = 174 bits (442), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|431920778|gb|ELK18551.1| U1 small nuclear ribonucleoprotein 70 kDa [Pteropus alecto]
Length = 423
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|115496910|ref|NP_001069514.1| U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
gi|117940094|sp|Q1RMR2.1|RU17_BOVIN RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|92098366|gb|AAI14763.1| Small nuclear ribonucleoprotein 70kDa (U1) [Bos taurus]
gi|296477500|tpg|DAA19615.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa [Bos taurus]
Length = 439
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|426244049|ref|XP_004015848.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Ovis aries]
Length = 340
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|351703349|gb|EHB06268.1| U1 small nuclear ribonucleoprotein 70 kDa [Heterocephalus glaber]
Length = 431
Score = 174 bits (442), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|344270065|ref|XP_003406866.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Loxodonta africana]
Length = 229
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|36100|emb|CAA28352.1| unnamed protein product [Homo sapiens]
Length = 614
Score = 174 bits (442), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 182 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 238
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 239 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 298
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 299 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 337
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 338 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 390
>gi|193657247|ref|XP_001947021.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 397
Score = 174 bits (441), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 149/369 (40%), Positives = 207/369 (56%), Gaps = 49/369 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP K +K +G+ F+ F +P D PP ET
Sbjct: 5 LPHNLLTLFAPRDPIPYLPPVSKLSHEKKNRGYSGVGSFMDLFEDPKD---TPPPTTIET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++ R + + E+ A K +E+ ++PH+D N DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 KEDKLERRRREKAEQVAYKLEQEIAAWNPHSDANAVTDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YG IK+++ + +K KPRGYAFIEY + RDM +AY
Sbjct: 122 FELYGLIKKIV---------------------VTRNKIDGKPRGYAFIEYENERDMYSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
K ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG EVN +SGRE
Sbjct: 161 KYADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNLIHSGREDNERERE 220
Query: 278 SRSAEPRIREDRHGDRDRER-------------SRERGRDRERE----REKSLELSHDRP 320
+ + I R +R+RER R R RD ER+ + S +L R
Sbjct: 221 RYARKMLISYSRTTERNRERDYYDRDGDREREPRRPRSRDHERKHHCSKSGSRKLHICRS 280
Query: 321 RDRDHRDDRHHRDRDR--TRDRERERDRGRERDRDRTRDRDRGRDRG-RDH-ERDREKDR 376
RDR RD + + ++ R+++ DR R+R R +RD +R ++R RDH RD+ KDR
Sbjct: 281 RDRGPRDVEYDEVEEVLGSKPRDKDPDRKRKRKRSHSRDCERRKNRKERDHYRRDKSKDR 340
Query: 377 DKERDRDRT 385
++ D++ +
Sbjct: 341 CEKYDKNNS 349
>gi|395529354|ref|XP_003766781.1| PREDICTED: LOW QUALITY PROTEIN: U1 small nuclear ribonucleoprotein
70 kDa [Sarcophilus harrisii]
Length = 439
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 151/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|158259701|dbj|BAF85809.1| unnamed protein product [Homo sapiens]
Length = 437
Score = 174 bits (440), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/234 (52%), Positives = 151/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRRKKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHTVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|50417136|gb|AAH77089.1| Snrnp70 protein [Danio rerio]
Length = 306
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 152/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K+T +PRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IYIVYNKKTGRPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN ++SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIKHSGRD 214
>gi|119572837|gb|EAW52452.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_g [Homo sapiens]
Length = 395
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 153/236 (64%), Gaps = 33/236 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP E K P P G+A ++ F +P D APP +
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLE--KLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE YGPIKR + +V K + KPRGYAFIEY H RDM
Sbjct: 120 RREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMH 158
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
+AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 159 SAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|56118714|ref|NP_001008126.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus (Silurana)
tropicalis]
gi|82234425|sp|Q66II8.1|RU17_XENTR RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|51703810|gb|AAH81331.1| small nuclear ribonucleoprotein 70kDa (U1) [Xenopus (Silurana)
tropicalis]
gi|89268700|emb|CAJ82715.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen)
[Xenopus (Silurana) tropicalis]
Length = 471
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 150/233 (64%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V +K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYNKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|341897322|gb|EGT53257.1| CBN-RNP-7 protein [Caenorhabditis brenneri]
Length = 320
Score = 173 bits (438), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 157/281 (55%), Gaps = 41/281 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP E K P+TG+AQ+++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPIQYLPPVEDLLVDKNAKRAPMTGVAQYINLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
A+ E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AQAKEEKRRQKEELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE+YG IK+L +V D E KPRGYAFIEY +M
Sbjct: 121 RREFEAYGKIKKLT---------------------MVHD-EAGKPRGYAFIEYSDKAEMH 158
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
AYK+ADG K+DG+R++VD ERGRT W PRRLGGG G TR E + E+E
Sbjct: 159 TAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTRE---SKAVIEEKEMQ 215
Query: 275 RGPSRSAEPRIREDRHGDRDRERSRER---GRDREREREKS 312
G E R RE R G RDR + R G DR+R RE S
Sbjct: 216 SGFGGGYEDRERE-RSGSRDRRQDSYRNGGGNDRDR-RESS 254
>gi|149462268|ref|XP_001517310.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like, partial
[Ornithorhynchus anatinus]
Length = 232
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 151/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDSNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 161 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 214
>gi|427788187|gb|JAA59545.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 449
Score = 172 bits (436), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 153/233 (65%), Gaps = 28/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE +GPIK+++ +V +K T KPRGYAF+EY H RDM +AY
Sbjct: 122 FEVFGPIKKIV---------------------IVHNKITGKPRGYAFVEYEHERDMHSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
K ADG+K+DGRRVLVDVERGRTV W PRRLGGGLG TR GG +VN ++SGRE
Sbjct: 161 KHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 213
>gi|134091|sp|P09406.1|RU17_XENLA RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|65179|emb|CAA30972.1| U1 70K [Xenopus laevis]
Length = 471
Score = 172 bits (436), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 148/233 (63%), Gaps = 26/233 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR+ G + S KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGS------------------GKPRGYAFIEYEHERDMHSA 163
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 164 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 216
>gi|148225156|ref|NP_001081603.1| U1 small nuclear ribonucleoprotein 70 kDa [Xenopus laevis]
gi|80479195|gb|AAI08448.1| LOC397946 protein [Xenopus laevis]
Length = 471
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 123/233 (52%), Positives = 148/233 (63%), Gaps = 26/233 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR+ G + S KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGS------------------GKPRGYAFIEYEHERDMHSA 163
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 164 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 216
>gi|237836905|ref|XP_002367750.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|211965414|gb|EEB00610.1| U1 small nuclear ribonucleoprotein, putative [Toxoplasma gondii
ME49]
gi|221482025|gb|EEE20391.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Toxoplasma
gondii GT1]
gi|221505100|gb|EEE30754.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 274
Score = 172 bits (435), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/217 (47%), Positives = 130/217 (59%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PL+ P +K+ G+A +V+ F E G P PP ETP
Sbjct: 4 IGMPPHILALFQARPPLDPFPAFKKKHTRGYVGLADYVNKF-ESGPP---PPTVPYETPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R R + RL K E +K+Y+P D ++GDP++TLFV +SY+TTE K+KREFE
Sbjct: 60 QRLLRQKRARLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVGGISYDTTEKKLKREFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YG IKR VRL+ D+ KPRGY FIE+ + RDMK AYK
Sbjct: 120 QYGSIKR---------------------VRLIYDRN-GKPRGYGFIEFENDRDMKEAYKN 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K+DGRRVLVDVER RTVP W PRRLGGG G R
Sbjct: 158 ADGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPR 194
>gi|401405687|ref|XP_003882293.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
gi|325116708|emb|CBZ52261.1| hypothetical protein NCLIV_020480 [Neospora caninum Liverpool]
Length = 260
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 131/217 (60%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PLE P +K+ G+A +V+ F E G P PP ETP
Sbjct: 4 IGMPPHILALFQARPPLEPFPAFKKKHTRGYVGLADYVNKF-ESGPP---PPTVPYETPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R R + RL K E +K+Y+P D ++GDP++TLFVA +SY+TTE K+KREF+
Sbjct: 60 QRLLRQKRERLLSHLSKQKELIKQYNPKEDKKLTGDPFRTLFVAGISYDTTEKKLKREFD 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YG IKR VRL+ D+ KPRGY FIE+ + RDMK AYK
Sbjct: 120 QYGSIKR---------------------VRLIYDRN-GKPRGYGFIEFENDRDMKEAYKN 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K+DGRRVLVDVER RTVP W PRRLGGG G R
Sbjct: 158 ADGKKIDGRRVLVDVERARTVPGWLPRRLGGGRGKPR 194
>gi|25152876|ref|NP_498565.2| Protein RNP-7 [Caenorhabditis elegans]
gi|351065637|emb|CCD61618.1| Protein RNP-7 [Caenorhabditis elegans]
Length = 332
Score = 172 bits (435), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 121/281 (43%), Positives = 157/281 (55%), Gaps = 41/281 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP + K P+TG+AQ++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPCQDLLVDKNAKRAPMTGVAQYIQLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AE E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AEAKEEKRRQKDELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE+YG IK+L +V D E KPRGYAFIEY +M
Sbjct: 121 RREFEAYGKIKKLT---------------------MVHD-EAGKPRGYAFIEYSDKAEMH 158
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
AYK+ADG K+DG+R++VD ERGRT W PRRLGGG G TR E + E+E +
Sbjct: 159 TAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTRKTRE---AKSVIEEREIA 215
Query: 275 RGPSRSAEPRIREDRHGDRDRERSRER---GRDREREREKS 312
G E R RE R G RDR + R G DR+R RE S
Sbjct: 216 SGFGGGYEDRDRE-RSGSRDRRQDSYRNGGGNDRDR-RESS 254
>gi|242003896|ref|XP_002422903.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
gi|212505785|gb|EEB10165.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Pediculus
humanus corporis]
Length = 309
Score = 171 bits (433), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 147/233 (63%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKNRGYQGVGAFIKYFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DPHN P +GDP+KTLFVAR++Y+T+E K++RE
Sbjct: 62 RDERLERRRRERAEQVAYKLEQEIAVWDPHNIPIATGDPFKTLFVARINYDTSEFKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGPIK+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPIKKIVVSHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|340382789|ref|XP_003389900.1| PREDICTED: hypothetical protein LOC100635457 [Amphimedon
queenslandica]
Length = 387
Score = 171 bits (432), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 113/235 (48%), Positives = 149/235 (63%), Gaps = 28/235 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P ++K P G++Q + F +P D P + ET
Sbjct: 5 LPPNLLALFAPREPLLYLPPTDQRPWEKKPWPYDGVSQCLGDFEDPQD---TPEPTRGET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ERRAR K R E+ K E++ +DP ND +SGDP+KTLFV R++++T+E K++RE
Sbjct: 62 RDERRARKRKERDERYRLKLESEIETWDPSNDSKISGDPFKTLFVGRINFDTSEGKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FESYGP+KR + +V+D ++ KPRGYAF+EY + RDM +AY
Sbjct: 122 FESYGPVKR---------------------INIVSDPKSGKPRGYAFVEYENERDMHSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 272
K ADG+K+DG+RV+VDVERGRTV +W+PRRLGGGLG TR G +YSGR E
Sbjct: 161 KYADGKKIDGKRVVVDVERGRTVKSWKPRRLGGGLGGTRKGAPHECIKYSGRVDE 215
>gi|156547263|ref|XP_001602052.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Nasonia
vitripennis]
Length = 402
Score = 170 bits (431), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 148/233 (63%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+++F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVNKLPHEKKSAGYVGLGAFLNNFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP + PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERNEQVAYKLEQEIAVWDPASIPNVTVDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ NS NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNSING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|195996029|ref|XP_002107883.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
gi|190588659|gb|EDV28681.1| hypothetical protein TRIADDRAFT_51837 [Trichoplax adhaerens]
Length = 342
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 111/234 (47%), Positives = 151/234 (64%), Gaps = 29/234 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L +L F P+ P++Y PP + RK P TG++ F+S F + + P ET
Sbjct: 5 LPPHLSAFFTPKEPIKYLPPLDTPSHLRKRRPYTGVSVFLSQFETVRN---SAPSVVTET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R R K RL+K + K ++L ++DPHN+P + DP+KTL V+RLSY+TTESK++RE
Sbjct: 62 REEKRTRQKKERLDKVSAKLQKDLAQWDPHNNPKGTEDPFKTLLVSRLSYDTTESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
E+YG +K VR + D + KP+GYAF+E+ H RDMKAAY
Sbjct: 122 LEAYGSVK---------------------SVRSIYDL-SGKPKGYAFVEFEHERDMKAAY 159
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 271
K ADG+K+DGRR+LVDVER RTV NW PRRLGGGLG TR+GGE++N ++SGRE+
Sbjct: 160 KYADGKKVDGRRILVDVERSRTVKNWLPRRLGGGLGGTRLGGEDINVKHSGREE 213
>gi|308501349|ref|XP_003112859.1| CRE-RNP-7 protein [Caenorhabditis remanei]
gi|308265160|gb|EFP09113.1| CRE-RNP-7 protein [Caenorhabditis remanei]
Length = 326
Score = 169 bits (429), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/222 (45%), Positives = 131/222 (59%), Gaps = 33/222 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE------KRKCPPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP E K P+TG+AQ++ F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPVEDLLVDKNAKRAPMTGVAQYIGLFEDPKDTPAKIPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
A+ E+R + +L A K + + ++P +P S DPY+TLFV R++YET+ESK+
Sbjct: 65 AQAKEEKRRQKDELL----AYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE+YG IK+L +V D E KPRGYAFIEY +M
Sbjct: 121 RREFEAYGKIKKLT---------------------MVHD-EAGKPRGYAFIEYSDKAEMH 158
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYK+ADG K+DG+R++VD ERGRT W PRRLGGG G TR
Sbjct: 159 TAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTR 200
>gi|395751523|ref|XP_002829587.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Pongo abelii]
Length = 624
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 128/204 (62%), Gaps = 29/204 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 130 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 186
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 187 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 246
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +A
Sbjct: 247 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSA 285
Query: 217 YKQADGRKLDGRRVLVDVERGRTV 240
YK ADG+K+DGRRVLV+VERGRTV
Sbjct: 286 YKHADGKKIDGRRVLVEVERGRTV 309
>gi|66910786|gb|AAH97714.1| LOC397946 protein [Xenopus laevis]
Length = 351
Score = 169 bits (428), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 149/234 (63%), Gaps = 26/234 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR+ G + S KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGS------------------GKPRGYAFIEYEHERDMHSA 163
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 164 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 217
>gi|51703882|gb|AAH81025.1| Unknown (protein for IMAGE:6864404), partial [Xenopus laevis]
Length = 267
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 123/234 (52%), Positives = 149/234 (63%), Gaps = 26/234 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPVPYLPPLDKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ + ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQDVENELKIWDPHNDQNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR+ G + S KPRGYAFIEY H RDM +A
Sbjct: 122 EFEVYGPIKRIHIVYNKGSEGS------------------GKPRGYAFIEYEHERDMHSA 163
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
YK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 164 YKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 217
>gi|241681381|ref|XP_002411590.1| SN-RNP U1, putative [Ixodes scapularis]
gi|215504330|gb|EEC13824.1| SN-RNP U1, putative [Ixodes scapularis]
Length = 405
Score = 169 bits (427), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 111/233 (47%), Positives = 150/233 (64%), Gaps = 28/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG+ +++S F +P D PP + ET
Sbjct: 5 LPPNLLALFAPREPIPYLPPTDKLPHEKTPGTYTGVGKYLSLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ ++PHN+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERVERKRREKAEQVAYKLEQDIALWEPHNNAAGTVDPFKTLFVARVNYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE +G IK+++ +V +K T KPRGYAF+EY H RDM +AY
Sbjct: 122 FEVFGSIKKIV---------------------IVHNKITGKPRGYAFVEYEHERDMHSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
K ADG+K+DGRRVLVDVERGRTV W PRRLGGGLG TR GG +VN ++SGRE
Sbjct: 161 KHADGKKIDGRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNTKHSGRE 213
>gi|320163510|gb|EFW40409.1| Snrp70 protein [Capsaspora owczarzaki ATCC 30864]
Length = 320
Score = 168 bits (426), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 92/221 (41%), Positives = 126/221 (57%), Gaps = 28/221 (12%)
Query: 40 TGLTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L +L +LFEPRAPL + P P ++ P TG+ V F P D P
Sbjct: 5 VNLPFSLHRLFEPRAPLFFLKPLDQLPYEKNLPSYTGIGHLVHKFENPAD---TPAAVYI 61
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ +E RA+ + + A + + P +PN + DP+KTLF++ LSY+TTE +K
Sbjct: 62 PSRLEIRAKKRQADESRHASELETATAAWHPKENPNATSDPFKTLFISNLSYDTTEESLK 121
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
RE E YG IK ++ +V + +T+KPRGYAF+E+ H RDMK
Sbjct: 122 REMEEYGSIK---------------------QIHIVRNTQTSKPRGYAFVEFEHERDMKD 160
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYKQADGRK+DGRR++VD ERGRT+ W+PRRLGGG+G R
Sbjct: 161 AYKQADGRKVDGRRIVVDFERGRTIKEWKPRRLGGGVGLPR 201
>gi|340715914|ref|XP_003396452.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
terrestris]
gi|350396793|ref|XP_003484667.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Bombus
impatiens]
Length = 409
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 115/233 (49%), Positives = 146/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F EP D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEEPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|91078908|ref|XP_967303.1| PREDICTED: similar to AGAP006755-PA isoform 1 [Tribolium castaneum]
gi|270003669|gb|EFA00117.1| hypothetical protein TcasGA2_TC002933 [Tribolium castaneum]
Length = 408
Score = 168 bits (425), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 117/232 (50%), Positives = 146/232 (62%), Gaps = 32/232 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVAKLPHEKKSRGYLGVGAFLKEFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP++ PN++ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEQEIAVWDPNSAPNITVDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKR--LICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGPIK+ LI NS NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPIKKIVLIHNSVNG-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 267
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG EVN ++S
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNIKHS 210
>gi|410982448|ref|XP_003997569.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Felis catus]
Length = 438
Score = 167 bits (424), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 121/233 (51%), Positives = 147/233 (63%), Gaps = 29/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHCE 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
Y DG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 161 YLWPDGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 213
>gi|307173080|gb|EFN64210.1| U1 small nuclear ribonucleoprotein 70 kDa [Camponotus floridanus]
Length = 409
Score = 167 bits (422), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 145/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPASKLPHEKKNSGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PR+LGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRKLGGGLGGTRRGGPDVNIKHSG 211
>gi|380019745|ref|XP_003693763.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Apis
florea]
Length = 409
Score = 166 bits (421), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 146/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|124514052|ref|XP_001350382.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
gi|23615799|emb|CAD52791.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium falciparum
3D7]
Length = 423
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 134/223 (60%), Gaps = 27/223 (12%)
Query: 39 PTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
G+ ++L LF+ R LE+ P +K+K +G++ F+++F E APP K E+
Sbjct: 3 AIGMPQHILILFQARPMLEFYKPIKKKKPKEYSGLSDFLNYFEEGE----APPKIKVESF 58
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
ER+ + K ++ E+ K+YDP + +++ DP KTLF+ RLSYE +E K+K+EF
Sbjct: 59 KERKEKKKKEKMAYNELILKEKRKEYDPFKNEDLTSDPKKTLFIGRLSYEVSEQKLKKEF 118
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
ESYG IK V+++ DK KPRGYAFIE+ HT+ M AYK
Sbjct: 119 ESYGKIK---------------------TVKIIYDKNL-KPRGYAFIEFEHTKSMNDAYK 156
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEE 261
ADG+K++ RR+LVD+ERGRT+ NW PRRLGGG G R G EE
Sbjct: 157 LADGKKIENRRILVDIERGRTIKNWIPRRLGGGKGPAR-GSEE 198
>gi|332017705|gb|EGI58383.1| U1 small nuclear ribonucleoprotein 70 kDa [Acromyrmex echinatior]
Length = 405
Score = 166 bits (420), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 146/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K TG+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFSPREPIPYLPPASKLPHEKKNGGYTGVGIFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVTHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|383866115|ref|XP_003708517.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Megachile rotundata]
Length = 410
Score = 166 bits (420), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 114/233 (48%), Positives = 146/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP PNV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGIPNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|56757815|gb|AAW27048.1| SJCHGC02307 protein [Schistosoma japonicum]
Length = 305
Score = 165 bits (418), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 108/259 (41%), Positives = 146/259 (56%), Gaps = 31/259 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PP EK RK P TG+AQF+ F + + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHANHRKLP-YTGVAQFLGEFEDASE---TPAPVRIET 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R + + E+ K ++L ++P +P + +PY T+FVARL+Y+TTESKIKRE
Sbjct: 61 REERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYDTTESKIKRE 120
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
+++G I ++ +V + T KPRGY F+E+ H RDM AA
Sbjct: 121 LDAFGRINNIV---------------------MVKNVITGKPRGYCFVEFEHERDMHAAV 159
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
K +GRK+DG RV+ DVERGRT P+WRPRRLG GLG R G + + R +EPSR
Sbjct: 160 KALNGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNRQGPSDKSHRKHENGREPSR-- 217
Query: 278 SRSAEPRIREDRHGDRDRE 296
RS I DRD+E
Sbjct: 218 DRSFGRTISSAHIRDRDKE 236
>gi|158286893|ref|XP_565448.3| AGAP006755-PA [Anopheles gambiae str. PEST]
gi|157020685|gb|EAL41962.3| AGAP006755-PA [Anopheles gambiae str. PEST]
Length = 434
Score = 165 bits (417), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 145/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L +NLL LF PR P+ Y PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPSNLLALFAPRDPIPYLPPPDKLPHEKKSQGYLGVGAFLDCFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERVERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YG IK++I ++ DK+T KPRGYAFIEY H RDM AAY
Sbjct: 122 FEIYGNIKKII---------------------MINDKDTGKPRGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+DG+RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|296416697|ref|XP_002838011.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633906|emb|CAZ82202.1| unnamed protein product [Tuber melanosporum]
Length = 395
Score = 165 bits (417), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 127/211 (60%), Gaps = 30/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL Y P P+KR+ P+TG+A ++ P DP Y P E+
Sbjct: 5 LPANLLALFAPRPPLRYLPHCDYAPDKRRTAPITGVAAYLETLRTP-DPDYVP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RR R+ + + AEK L +Y+P +DP V GDP+KTLF++RL+Y E ++RE
Sbjct: 60 WMQRRDRLREEKKAAIAEKTKAALVQYNPEHDPQVRGDPFKTLFLSRLNYNVKEPDLERE 119
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F +GPI E++R+V DKET K RGYAFI Y +DMKAAY
Sbjct: 120 FGRFGPI---------------------ERIRIVRDKETGKHRGYAFIVYEREKDMKAAY 158
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
K+ DG ++ RRVLVDVERGRTV W+PRRL
Sbjct: 159 KETDGIRIKDRRVLVDVERGRTVKGWKPRRL 189
>gi|193662169|ref|XP_001952270.1| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa-like
[Acyrthosiphon pisum]
Length = 414
Score = 164 bits (416), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 143/231 (61%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ F +P D PP K ET
Sbjct: 5 LPPNLLALFAPRDPVPYLPPVAKLPHEKKTRGYLGVGSFMDLFEDPED---TPPPTKIET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +E+ ++PH+ N + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRREKAEQVAYKLEQEIALWEPHSVANATTDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ +K KPRGYAFIEY + RDM +AY
Sbjct: 122 FELYGPIKKIVVTH---------------------NKIDGKPRGYAFIEYEYERDMHSAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG EVN ++SG
Sbjct: 161 KHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPEVNLKHSG 211
>gi|66828257|ref|XP_647483.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
gi|74997505|sp|Q55FQ0.1|RU17_DICDI RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|60475520|gb|EAL73455.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
discoideum AX4]
Length = 459
Score = 164 bits (416), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 131/209 (62%), Gaps = 31/209 (14%)
Query: 71 TGMAQFVSHFAEPGDPLYAPPVEK--AETPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
TG+ ++S F +P + P +K E E+R + KL++ + E+ ++ LK +DP++
Sbjct: 33 TGLRDYLSIFTDPSN---EEPFKKEHIENLEEKREKKRKLKISENDERISKSLKAWDPYS 89
Query: 129 DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKV 188
+ +GDPYKT+FV+R+SY+TT+ K++ EF +GPIK L
Sbjct: 90 NSETTGDPYKTIFVSRISYKTTQQKLEFEFGQFGPIKSLF-------------------- 129
Query: 189 RLVTDKETNKP---RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
LV K++N P GYAFIE+ RDMKAAYKQADG K+D RR++VD+ERGR + NW+P
Sbjct: 130 -LV--KDSNNPEKHTGYAFIEFERERDMKAAYKQADGMKIDDRRIVVDIERGRVIKNWKP 186
Query: 246 RRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
R+ GGGLG TR GG +VNQ +SGRE S
Sbjct: 187 RKFGGGLGNTRAGGVDVNQTFSGREMSES 215
>gi|330795602|ref|XP_003285861.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
gi|325084166|gb|EGC37600.1| hypothetical protein DICPUDRAFT_76792 [Dictyostelium purpureum]
Length = 419
Score = 164 bits (414), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 128/204 (62%), Gaps = 28/204 (13%)
Query: 71 TGMAQFVSHFAEPG--DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
TG++ + S+F +P +P VE A E+R + K + + E+ A+ LK +DP++
Sbjct: 33 TGLSSYTSYFEDPSKEEPFKREIVESA---TEKREKKRKAKEDANNERNAKHLKSWDPYS 89
Query: 129 DPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEK 187
P + +GDPYKT+FV+R+SY+TT+ K++ EF +G IK
Sbjct: 90 HPELHTGDPYKTIFVSRISYQTTQKKLEYEFSQFGNIK---------------------S 128
Query: 188 VRLVTD-KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 246
+ LV D K K RGYAFIE+ RDMKAAYKQADG K+D RR+LVD+ERGR + NW+PR
Sbjct: 129 IYLVKDPKNPQKHRGYAFIEFERERDMKAAYKQADGMKIDDRRILVDIERGRVIKNWKPR 188
Query: 247 RLGGGLGTTRVGGEEVNQRYSGRE 270
+ GGGLG TR GG +VNQ +SGRE
Sbjct: 189 KFGGGLGNTRAGGADVNQTFSGRE 212
>gi|268573870|ref|XP_002641912.1| C. briggsae CBR-RNP-7 protein [Caenorhabditis briggsae]
Length = 312
Score = 163 bits (413), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 130/222 (58%), Gaps = 33/222 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC------PPLTGMAQFVSHFAEPGD-PLYAPPVEK 94
L NLL LFE R P++Y PP ++ P+TG+AQ+V F +P D P P V K
Sbjct: 5 LPPNLLALFEARPPVQYLPPVQELLVDKNAKRAPMTGVAQYVGLFEDPKDTPPKLPVVTK 64
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
+ E+R + +L A K + + ++P + + DPY+TLFV R++YET+ESK+
Sbjct: 65 EQAKEEKRRQKEELL----AYKVEQGIATWNPAENSRATEDPYRTLFVGRINYETSESKL 120
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE+YG IK+L +V D E+ KPRGYAFIEY +M
Sbjct: 121 RREFEAYGKIKKLT---------------------MVHD-ESGKPRGYAFIEYSDKAEMH 158
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYK+ADG K+DG+R++VD ERGRT W PRRLGGG G TR
Sbjct: 159 TAYKKADGIKVDGKRLVVDYERGRTQKTWLPRRLGGGKGDTR 200
>gi|323455541|gb|EGB11409.1| hypothetical protein AURANDRAFT_14747, partial [Aureococcus
anophagefferens]
Length = 215
Score = 163 bits (412), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 135/222 (60%), Gaps = 20/222 (9%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPP-VEKAETPVE 100
L + +F+P PL ++ KR+ P TG+A + F APP EK ETP E
Sbjct: 1 LPPAMKAMFQPGPPLLFREKISKRRPTPYTGVAAYRDLFET-----TAPPEPEKNETPRE 55
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-----SGDPYKTLFVARLSYETTESKIK 155
RRA++ + E + A + +DP P+ +GD YKTLFVARLSY+TTE K++
Sbjct: 56 RRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKLR 115
Query: 156 REFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
REFE +G IK L + + + +G D+ + T PRGYAF+E+ DM+
Sbjct: 116 REFEQFGAIKALRVVHERDPDHEPMEGD--DDALHAGT------PRGYAFVEFERESDMR 167
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYK+ADGRK+DGRRVLVDVERGRTV NWRPR+LGGGLG+TR
Sbjct: 168 DAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTR 209
>gi|313229018|emb|CBY18170.1| unnamed protein product [Oikopleura dioica]
Length = 322
Score = 162 bits (411), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 119/311 (38%), Positives = 159/311 (51%), Gaps = 75/311 (24%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKR--KCPPLTGMAQFVSHFAEPGDP-LYAPPVEK 94
L NL+ LF+PR P+E+K P P +R P +G+A FV+ F DP PP +
Sbjct: 5 LPPNLIALFQPREPVEFKNPEGDLPWERDRTKHPYSGIAPFVNDF----DPSTETPPKVR 60
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ET E+ R K +LEKG +K E L +++PH D V DP+KTLFVAR+ +ET +SK+
Sbjct: 61 VETREEKEKRKRKDKLEKGMKKTEENLDEWNPHEDDKVESDPFKTLFVARIKFETNDSKL 120
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
KREFE YG IK VR+V + + KP+GYAF+E+ RDM
Sbjct: 121 KREFEEYGRIK---------------------SVRIVENLKNGKPKGYAFVEFEKERDMH 159
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPS 274
+AYK ADG+K+DG+RVLVDVERGRTV WRPRRLGGGLG +R + PS
Sbjct: 160 SAYKYADGKKIDGKRVLVDVERGRTVKGWRPRRLGGGLGNSR--------------RAPS 205
Query: 275 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 334
P R+ +R R + D + RD R +
Sbjct: 206 --PIRTEVDELR----------------------RRGGYGFAGD-----EKRDQARERAK 236
Query: 335 DRTRDRERERD 345
R + ++D
Sbjct: 237 LLDRSKREKKD 247
>gi|328777938|ref|XP_623789.3| PREDICTED: u1 small nuclear ribonucleoprotein 70 kDa isoform 1
[Apis mellifera]
Length = 409
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 145/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPVSKLPHEKKNGGYIGVGGFLKYFEDPKD---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGILNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTING-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|221126649|ref|XP_002157902.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like [Hydra
magnipapillata]
Length = 351
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 128/208 (61%), Gaps = 33/208 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPE---KRK---CPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L ANLL LF R P+ +KPP E KRK C G+ FVS+F E P PP +
Sbjct: 5 LPANLLALFSARPPIPFKPPVEGLKKRKNSHC--YVGLGDFVSNF-EVKPP---PPATRG 58
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
ET E+ R + A++ +L +DPH DPN SGDP+KTLFVAR++Y+TTESK++
Sbjct: 59 ETREEKEERKKYEKETATAKELERKLASWDPHTDPNASGDPFKTLFVARINYDTTESKLR 118
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
RE E++GPI+ K+ +V + KPRGYAF+E+ H RDM+A
Sbjct: 119 RELETHGPIR---------------------KIHMVYNFVKRKPRGYAFVEFEHERDMQA 157
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
A+K +DG+K+DGRR++VDVERGRTV +W
Sbjct: 158 AFKHSDGKKIDGRRIVVDVERGRTVKSW 185
>gi|256072974|ref|XP_002572808.1| U1 small nuclear ribonucleoprotein 70 kD [Schistosoma mansoni]
gi|360042919|emb|CCD78329.1| putative u1 small nuclear ribonucleoprotein 70 kD [Schistosoma
mansoni]
Length = 307
Score = 162 bits (410), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 96/221 (43%), Positives = 129/221 (58%), Gaps = 29/221 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PP EK RK P TG+AQF+ F + + P + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPIEKHANHRKLP-YTGVAQFLGEFEDASE---TPAPVRIET 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R + + E+ K ++L ++P +P + +PY T+FVARL+YETTESK+KRE
Sbjct: 61 REERKERKRREKQEQANYKLEQDLALWNPKKNPKATSNPYNTMFVARLNYETTESKLKRE 120
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
+ +G I ++ +V + T KPRGY F+E+ H RDM AA
Sbjct: 121 IDVFGRINNIV---------------------MVKNVMTGKPRGYCFVEFEHERDMHAAV 159
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
K +GRK+DG RV+ DVERGRT P+WRPRRLG GLG R G
Sbjct: 160 KSLNGRKIDGVRVVTDVERGRTRPDWRPRRLGKGLGKNRQG 200
>gi|307193764|gb|EFN76445.1| U1 small nuclear ribonucleoprotein 70 kDa [Harpegnathos saltator]
Length = 239
Score = 161 bits (407), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 112/233 (48%), Positives = 145/233 (62%), Gaps = 32/233 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++K G+ F+ +F +P + PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPANKLPHEKKVGGYIGVGTFLKYFEDPKE---TPPPVRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP NV+ DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQVAYKLEQEIAVWDPAGISNVTADPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLIC--NSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
FE YGP+K+++ N+ NG KPRGYAFIEY H RDM +
Sbjct: 122 FEVYGPVKKIVVIHNTVNG-----------------------KPRGYAFIEYEHERDMHS 158
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
AYK ADG+K+DGRRVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 159 AYKHADGKKIDGRRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 211
>gi|391348809|ref|XP_003748634.1| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa-like
[Metaseiulus occidentalis]
Length = 381
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 145/233 (62%), Gaps = 28/233 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+ R P+ + P P +++ G+ F+ +F +P + PP + ET
Sbjct: 5 LPPNLLALFKARDPIPFLHPIGKLPHEKQQETYIGVGTFIRYFEDPSE---TPPAMRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ERR R K + E+ A + + + +DP+N+P + DP+KTLF+AR++YET+E K++RE
Sbjct: 62 REERRERRKKEKAEETAYQLEQAIALWDPNNNPKATADPFKTLFIARINYETSEGKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YG IK +V L+ +NKPRGYAFIEY H RDM AAY
Sbjct: 122 FEQYGAIK---------------------QVSLIHSSISNKPRGYAFIEYAHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
K ADG+K+D RRVLVDVERGRTV W PRRLGGGLG TR GG +VN R+SGRE
Sbjct: 161 KHADGKKIDSRRVLVDVERGRTVKGWLPRRLGGGLGGTRRGGPDVNVRHSGRE 213
>gi|156371745|ref|XP_001628922.1| predicted protein [Nematostella vectensis]
gi|156215911|gb|EDO36859.1| predicted protein [Nematostella vectensis]
Length = 245
Score = 160 bits (406), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 125/207 (60%), Gaps = 29/207 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPL-TGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR PL + PP +K +K P L +G+ F+ F +P D P E
Sbjct: 5 LPPNLLALFAPRDPLPFAPPLDKPSWLKKTPWLYSGVGSFLHVFEDPKD---TPDPTFGE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T E+ R + + E+ A++ E++ +DP DPN GD +KTLF+ R++Y+T+ESK++R
Sbjct: 62 TREEKIERKRREKQERVAQELEEKIGSWDPQTDPNAYGDAFKTLFIGRINYDTSESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
E E YGPIK + +V + + +KPRGYAFIEY H RDM AA
Sbjct: 122 EMEMYGPIKH---------------------ISMVYNSKASKPRGYAFIEYEHERDMHAA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNW 243
YK ADG+K+DGRR++VDVERGRTV +W
Sbjct: 161 YKHADGKKIDGRRIVVDVERGRTVKSW 187
>gi|312370835|gb|EFR19148.1| hypothetical protein AND_22983 [Anopheles darlingi]
Length = 553
Score = 160 bits (405), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 111/231 (48%), Positives = 143/231 (61%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 135 LPPNLLALFAPRDPIPYLPPPDKLPHEKKSRGYLGVGSFLDGFEDPKD---TPPPTRVET 191
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLF+AR++Y+T+ESK++RE
Sbjct: 192 REERIERRRRERAEQVAYKLEREIATWDPNQLLEATEDPFKTLFIARINYDTSESKLRRE 251
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YG IK++I ++ DK + KPRGYAFIEY H RDM AAY
Sbjct: 252 FEMYGNIKKII---------------------MINDKNSGKPRGYAFIEYEHERDMHAAY 290
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+DG+RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 291 KHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGPDVNIKHSG 341
>gi|427779523|gb|JAA55213.1| Putative u1 small nuclear ribonucleoprotein 70 kda [Rhipicephalus
pulchellus]
Length = 476
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 113/260 (43%), Positives = 153/260 (58%), Gaps = 55/260 (21%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM---- 213
FE +GPIK+++ +V +K T KPRGYAF+EY H RDM
Sbjct: 122 FEVFGPIKKIV---------------------IVHNKITGKPRGYAFVEYEHERDMHSAY 160
Query: 214 -----------------------KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 250
AAYK ADG+K+DGRRVLVDVERGRTV W PRRLGG
Sbjct: 161 KHADGKKIDGRRVLVDVERGXVLSAAYKHADGKKIDGRRVLVDVERGRTVKGWLPRRLGG 220
Query: 251 GLGTTRVGGEEVNQRYSGRE 270
GLG TR GG +VN ++SGRE
Sbjct: 221 GLGGTRRGGPDVNTKHSGRE 240
>gi|389584381|dbj|GAB67113.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium cynomolgi
strain B]
Length = 494
Score = 160 bits (404), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 125/217 (57%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R L + P +K+K +G++++++ F E +P PP K E
Sbjct: 4 IGMPPHILILFQARPLLSFYKPIQKKKHQAYSGISEYLNLF-EDKEP---PPKIKLENAK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+EFE
Sbjct: 60 ERKERKKKEKITYNELMLKEMRKNYDPFKNEDLTNDPKKTIFIGRLSYDVNEKKLKKEFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YG IK KV+++ DK KP+GYAFIE+ HT+ AY
Sbjct: 120 VYGKIK---------------------KVKIIYDKNF-KPKGYAFIEFEHTKSFNDAYNL 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K+D RR+LVDVERGRTV NW PRRLGGG G R
Sbjct: 158 ADGKKIDNRRILVDVERGRTVKNWIPRRLGGGKGPPR 194
>gi|302798549|ref|XP_002981034.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
gi|300151088|gb|EFJ17735.1| hypothetical protein SELMODRAFT_154282 [Selaginella moellendorffii]
Length = 246
Score = 159 bits (403), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/96 (81%), Positives = 87/96 (90%), Gaps = 2/96 (2%)
Query: 187 KVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 246
+VRLV DK++NKPRGYAFIEY HTRDMKAAYKQADGRK+D RRVLVDVERGRTVPNWRPR
Sbjct: 36 QVRLVHDKDSNKPRGYAFIEYFHTRDMKAAYKQADGRKIDNRRVLVDVERGRTVPNWRPR 95
Query: 247 RLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAE 282
RLGGGLG+TRVGG+EVNQ+YSGR EP G +R+ E
Sbjct: 96 RLGGGLGSTRVGGDEVNQKYSGR--EPQVGGARTEE 129
>gi|328769422|gb|EGF79466.1| hypothetical protein BATDEDRAFT_89771 [Batrachochytrium
dendrobatidis JAM81]
Length = 327
Score = 159 bits (401), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 92/210 (43%), Positives = 121/210 (57%), Gaps = 28/210 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
L +LL+LF PR L Y P P+ + P T ++ F+ DP Y ET
Sbjct: 5 LPPSLLRLFAPRPALPYMPALADPKTKTAPIYTSVSSFLPLCRMGHDPDYI----ATETM 60
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREF 158
+R+ R+ + K A E + +DPH D N + +PYKTLFV+RLS++TTE +K EF
Sbjct: 61 EDRKKRLAAEKAAKTAAALQEAIDAWDPHKDENATAEPYKTLFVSRLSFDTTEKTLKHEF 120
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
E++G +K V +V D +T KPRGYAFIE+ H RDMK AYK
Sbjct: 121 EAFGEVK---------------------SVSIVKDLKTGKPRGYAFIEFEHERDMKIAYK 159
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+G K+DGRR+LVDVERGRTVP W+PRRL
Sbjct: 160 DAEGLKIDGRRILVDVERGRTVPGWKPRRL 189
>gi|70953786|ref|XP_745972.1| u1 small nuclear ribonucleoprotein [Plasmodium chabaudi chabaudi]
gi|56526457|emb|CAH81463.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium chabaudi
chabaudi]
Length = 373
Score = 157 bits (398), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/217 (42%), Positives = 130/217 (59%), Gaps = 27/217 (12%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL ++L LF+ R L++ P +K+K +G++ F+++F E G P PP K E+P
Sbjct: 4 IGLPPHILILFQSRPLLDFHKPIKKKKPKEYSGISDFLNYF-EDGKP---PPKIKLESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E+ K+YDP + ++S DP KTLF+ RLSYE E K+K+EFE
Sbjct: 60 ERKERKQKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+YG IK V+++ D + KPRGYAFIE HT+ + AY
Sbjct: 120 TYGKIKY---------------------VKVICD-QNKKPRGYAFIE-EHTKSVTDAYNL 156
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K++ RR+LVD+ER RTV NW PRRLGGG G +R
Sbjct: 157 ADGKKIENRRILVDMERARTVKNWLPRRLGGGKGPSR 193
>gi|357518363|ref|XP_003629470.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
gi|355523492|gb|AET03946.1| U1 small nuclear ribonucleoprotein 70 kDa [Medicago truncatula]
Length = 314
Score = 157 bits (396), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/91 (85%), Positives = 87/91 (95%), Gaps = 1/91 (1%)
Query: 213 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQE 272
MKAAYKQADGRK++GRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG+EVNQR+SGREQ+
Sbjct: 1 MKAAYKQADGRKIEGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGDEVNQRHSGREQQ 60
Query: 273 PSRGPSRSAEPRIREDRHGDRDRERSRERGR 303
S GPSRS EPR+RE+RH DRDRE+SRERG+
Sbjct: 61 QS-GPSRSEEPRVREERHADRDREKSRERGK 90
>gi|294461893|gb|ADE76503.1| unknown [Picea sitchensis]
Length = 221
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 98/120 (81%), Gaps = 3/120 (2%)
Query: 208 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 267
MHTRDMK AYKQADGRK+D RRVLVDVERGRTVPNWRPRRLGGGLG+TRVGGEEVNQ+YS
Sbjct: 1 MHTRDMKTAYKQADGRKIDNRRVLVDVERGRTVPNWRPRRLGGGLGSTRVGGEEVNQKYS 60
Query: 268 GRE-QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERE-REKSLELSHDRPRDRDH 325
GRE Q S GP R EP+IRE+RH DR ER ER RDR+R RE+ E SH+R R+R H
Sbjct: 61 GREPQLLSTGPPRIEEPKIREERHDDRS-ERDNERERDRDRNVREREPERSHERSRERSH 119
>gi|195117134|ref|XP_002003104.1| GI24161 [Drosophila mojavensis]
gi|193913679|gb|EDW12546.1| GI24161 [Drosophila mojavensis]
Length = 452
Score = 156 bits (395), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/231 (47%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F+S F +P D PP + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVANFMSDFEDPKD---TPPPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLFVAR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|255077010|ref|XP_002502160.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
gi|226517425|gb|ACO63418.1| U1 small nuclear ribonucleoprotein [Micromonas sp. RCC299]
Length = 465
Score = 156 bits (394), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 103/239 (43%), Positives = 142/239 (59%), Gaps = 24/239 (10%)
Query: 35 GQSHPTGLTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
H TGLT +LL+LF R P+EY PPP K +K P TG+A +V F +P + PP E
Sbjct: 64 ASVHQTGLTPSLLRLFVARPPVEYHPPPAKPKKTQPYTGIADYVKLFTDPEEDPPPPPAE 123
Query: 94 KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTES 152
ET E++ R + ++ + E++ ++P DP ++ DPYKTLFV RLSY+ E+
Sbjct: 124 PKETKAEKKTRRAAEKAKENDARIEEDITSWNPKEDPKLADSDPYKTLFVGRLSYDVDEA 183
Query: 153 KIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRD 212
++REFE +G +K + V + + KPRGYAF+E+ D
Sbjct: 184 ALRREFERFGAVKSVT----------------------VVEDQDGKPRGYAFVEFDRESD 221
Query: 213 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 271
MK AY+ ADG +L+GRR+LVD ERGRTVP+WRPRR GGLG TR GG+ N +GR+Q
Sbjct: 222 MKHAYRSADGLRLEGRRILVDAERGRTVPDWRPRRFNGGLGGTRRGGKTENSLVAGRDQ 280
>gi|763157|emb|CAA33777.1| U1RNA-associated 70-kDa protein [Mus musculus]
Length = 378
Score = 154 bits (390), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 115/161 (71%), Gaps = 21/161 (13%)
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLI 168
++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR
Sbjct: 4 KIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR-- 61
Query: 169 CNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 228
+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGR
Sbjct: 62 -------------------IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGR 102
Query: 229 RVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
RVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 103 RVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 143
>gi|345570960|gb|EGX53775.1| hypothetical protein AOL_s00004g434 [Arthrobotrys oligospora ATCC
24927]
Length = 368
Score = 154 bits (390), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 122/211 (57%), Gaps = 30/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL Y P PE RK P++G+AQF+ P DP + P E+
Sbjct: 5 LPGNLLALFQPRPPLRYLQPADHAPEHRKTAPISGVAQFLEELRNP-DPDFMP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+ R R + +LE + + Y+P DP++ GDPYKTLFV+RLSY+ E ++RE
Sbjct: 60 WLLARDRKKREKLENQERTLKQGAENYNPGEDPHIRGDPYKTLFVSRLSYDVKEQDLERE 119
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F +GPI R +RLV DKE+ KPRGYAFI + +DMKAA+
Sbjct: 120 FGRFGPIDR---------------------IRLVRDKESKKPRGYAFILFEREKDMKAAF 158
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
K+ DG ++ RR+ VDVERGRT W+PRRL
Sbjct: 159 KETDGMRIKDRRISVDVERGRTTKGWKPRRL 189
>gi|295670647|ref|XP_002795871.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226284956|gb|EEH40522.1| hypothetical protein PAAG_02577 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 409
Score = 154 bits (389), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 128/217 (58%), Gaps = 34/217 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYMHTR 211
F +GPI E++R+V D K KP RGYAFI Y +
Sbjct: 122 FGRFGPI---------------------ERIRIVVDTHNPKKNPKKPHRGYAFIVYEREK 160
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 DMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|302786704|ref|XP_002975123.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
gi|300157282|gb|EFJ23908.1| hypothetical protein SELMODRAFT_102480 [Selaginella moellendorffii]
Length = 137
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 79/140 (56%), Positives = 100/140 (71%), Gaps = 13/140 (9%)
Query: 34 IGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
+ +SHPTGLT NLL+LF+P P+EYK P EK++ PP TG+AQFVS F ++
Sbjct: 1 LAKSHPTGLTPNLLRLFDPPPPVEYKEPIEKKELPPYTGIAQFVSCFENLS-------ID 53
Query: 94 ------KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSY 147
K ET ERRAR++ RLEKG EK AEE+ KYDP +DPN GDPYKTLF+ +LSY
Sbjct: 54 DQESQAKVETIAERRARVNAARLEKGKEKLAEEIPKYDPRSDPNARGDPYKTLFIGKLSY 113
Query: 148 ETTESKIKREFESYGPIKRL 167
ETTE +++REFE YGP+KR+
Sbjct: 114 ETTEHRLQREFERYGPVKRV 133
>gi|312088239|ref|XP_003145783.1| hypothetical protein LOAG_10208 [Loa loa]
Length = 353
Score = 154 bits (389), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 127/324 (39%), Positives = 164/324 (50%), Gaps = 79/324 (24%)
Query: 26 ANVLQLKLIGQSHPTGLTA----NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFV 77
A + + L+ H +T NLL LFE R PL YKPPP++ RK P ++G+++++
Sbjct: 27 AGSVPMSLLLFGHYCIMTQFLPDNLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYI 86
Query: 78 SHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPY 137
F +P D PP ET ERRAR K + E A K + + + P +P+ + DPY
Sbjct: 87 HLFEDPKD---TPPKPVYETKEERRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPY 143
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN 197
KTLFVAR++YET+ESK++REFE +G I RL LV DK
Sbjct: 144 KTLFVARINYETSESKLRREFEQFGKITRL---------------------ALVHDKN-G 181
Query: 198 KPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV 257
KPRGYAFIEY H M AYK+ADG K+DGRRV+VD ERGRT +W PRRLGGG G TR
Sbjct: 182 KPRGYAFIEYQHKESMSEAYKKADGMKIDGRRVVVDYERGRTQKSWLPRRLGGGKGDTR- 240
Query: 258 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 317
R+RE + +LE++H
Sbjct: 241 --------------------------RLRE----------------SKAVLEAAALEMAH 258
Query: 318 DRPRDRDHRDDRHHRDRDRTRDRE 341
+ DRDHR HR RDRE
Sbjct: 259 E---DRDHRSSSTHRSYSHDRDRE 279
>gi|119174818|ref|XP_001239737.1| hypothetical protein CIMG_09358 [Coccidioides immitis RS]
gi|303314545|ref|XP_003067281.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240106949|gb|EER25136.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320037587|gb|EFW19524.1| U1 small nuclear ribonucleoprotein [Coccidioides posadasii str.
Silveira]
gi|392869929|gb|EAS28470.2| U1 small nuclear ribonucleoprotein [Coccidioides immitis RS]
Length = 395
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 123/215 (57%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL+Y P PE + LTG+AQFV + + P E+
Sbjct: 5 LPANLLALFAPRPPLKYLKPIDRAPEDVRQSDLTGVAQFVGELQNYAEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR + + E+ + E LK YDP +DP V GDP+KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARQKQEKKEELDKYLTEGLKTYDPSSDPQVRGDPFKTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+VTD P RGYAFI Y DM
Sbjct: 122 FGRFGPI---------------------ERIRIVTDPSNTNPKKKHRGYAFIVYERELDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 195
>gi|221057416|ref|XP_002261216.1| U1 small nuclear ribonucleoprotein [Plasmodium knowlesi strain H]
gi|194247221|emb|CAQ40621.1| U1 small nuclear ribonucleoprotein, putative [Plasmodium knowlesi
strain H]
Length = 412
Score = 154 bits (388), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 89/217 (41%), Positives = 123/217 (56%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF R PL + P +K+K +G++++V+ F E +P PP K E
Sbjct: 4 IGMPPHILILFHARPPLTFYKPIQKKKHEAYSGISEYVNLF-EDKEP---PPKIKLENAK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+EFE
Sbjct: 60 ERKERKKKEKITYNELMLKEMRKNYDPFKNVDLTEDPKKTIFIGRLSYDVNEKKLKKEFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YG IK KV+++ DK KP+GY FIE+ HT+ AY
Sbjct: 120 VYGKIK---------------------KVKIIYDKNF-KPKGYGFIEFEHTKSFNDAYNL 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K+D RR+LVDVER RTV NW PRRLGGG G R
Sbjct: 158 ADGKKIDNRRILVDVERARTVKNWIPRRLGGGKGPPR 194
>gi|82752588|ref|XP_727361.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii yoelii
17XNL]
gi|23483169|gb|EAA18926.1| u1 small nuclear ribonucleoprotein 70 kDa [Plasmodium yoelii
yoelii]
Length = 391
Score = 153 bits (387), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 133/217 (61%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL ++L LF+ R L++ P +K+K TG+++F+++F E G P PP K E+P
Sbjct: 4 IGLPPHILILFQSRPLLDFYKPIKKKKPKEYTGISEFLNYF-EDGKP---PPKIKLESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E+ K+YDP + ++S DP KTLF+ RLSYE E K+K+EFE
Sbjct: 60 ERKERKKKEKIAYNELILKEKKKEYDPFKNNDISSDPKKTLFIGRLSYEVNEKKLKKEFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+YG IK V+++ D++ KPRGYAFIE+ HT+ + AY
Sbjct: 120 TYGKIKY---------------------VKVIYDQDK-KPRGYAFIEFEHTKSVTDAYNL 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K++ RR+LVD+ER RTV NW PRRLGGG G +R
Sbjct: 158 ADGKKIENRRILVDMERARTVKNWVPRRLGGGKGPSR 194
>gi|17137278|ref|NP_477205.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|442626488|ref|NP_001260172.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|442626490|ref|NP_001260173.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
gi|13638469|sp|P17133.2|RU17_DROME RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa; Short=U1
snRNP 70 kDa; Short=U1-70K; Short=snRNP70
gi|7297205|gb|AAF52471.1| small ribonucleoprotein particle U1 subunit 70K, isoform A
[Drosophila melanogaster]
gi|16769660|gb|AAL29049.1| LD46049p [Drosophila melanogaster]
gi|19528491|gb|AAL90360.1| RE35772p [Drosophila melanogaster]
gi|220946876|gb|ACL85981.1| snRNP70K-PA [synthetic construct]
gi|220956416|gb|ACL90751.1| snRNP70K-PA [synthetic construct]
gi|440213473|gb|AGB92708.1| small ribonucleoprotein particle U1 subunit 70K, isoform B
[Drosophila melanogaster]
gi|440213474|gb|AGB92709.1| small ribonucleoprotein particle U1 subunit 70K, isoform C
[Drosophila melanogaster]
Length = 448
Score = 153 bits (386), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|158315|gb|AAA28859.1| U1 70K small nuclear ribonucleoprotein, (first expressed exon)
[Drosophila melanogaster]
Length = 448
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|226295399|gb|EEH50819.1| hypothetical protein PADG_06898 [Paracoccidioides brasiliensis
Pb18]
Length = 417
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 93/217 (42%), Positives = 126/217 (58%), Gaps = 34/217 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP------RGYAFIEYMHTR 211
F +GPI E++R+V D K RGYAFI Y +
Sbjct: 122 FGRFGPI---------------------ERIRIVVDTHNPKKNPKKSHRGYAFIVYEREK 160
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 DMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|428186025|gb|EKX54876.1| hypothetical protein GUITHDRAFT_45393, partial [Guillardia theta
CCMP2712]
Length = 200
Score = 152 bits (385), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 130/223 (58%), Gaps = 33/223 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
+ ++ LF PR PLE+K P +KRK P G+A+ + F P + Y +K +
Sbjct: 3 IVPHINALFAPRPPLEFKQPYSQQVGKKRKLP-YEGIAKCLDSFETPDE--YEENFKKFK 59
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPN---VSGDPYKTLFVARLSYETTESK 153
P+E+R + E+ + + +K DP+ D YKTLFV RLS+ T E K
Sbjct: 60 -PIEQRKERRERIAEERKTLSQDTVKAKAAAWDPSSYSFESDAYKTLFVGRLSFMTDEHK 118
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
+KRE E YGP+K + LV DK+T+KPRGY F+E+ H RDM
Sbjct: 119 LKREMEQYGPVKSAV---------------------LVYDKDTSKPRGYGFVEFEHERDM 157
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
K AYK ADGRK+DGRR+LVDVERGRTV +W+PR++GGGLG++R
Sbjct: 158 KTAYKHADGRKIDGRRILVDVERGRTVKDWKPRKIGGGLGSSR 200
>gi|194862752|ref|XP_001970105.1| GG23559 [Drosophila erecta]
gi|190661972|gb|EDV59164.1| GG23559 [Drosophila erecta]
Length = 448
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195338817|ref|XP_002036020.1| GM13669 [Drosophila sechellia]
gi|194129900|gb|EDW51943.1| GM13669 [Drosophila sechellia]
Length = 448
Score = 152 bits (384), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195471605|ref|XP_002088093.1| GE18384 [Drosophila yakuba]
gi|194174194|gb|EDW87805.1| GE18384 [Drosophila yakuba]
Length = 448
Score = 152 bits (384), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|602021|emb|CAA29961.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 94/151 (62%), Positives = 110/151 (72%), Gaps = 21/151 (13%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR 179
ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR
Sbjct: 36 ELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR------------- 82
Query: 180 DGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRT
Sbjct: 83 --------IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 134
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
V WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 135 VKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 165
>gi|195387576|ref|XP_002052470.1| GJ21434 [Drosophila virilis]
gi|194148927|gb|EDW64625.1| GJ21434 [Drosophila virilis]
Length = 454
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F+S F +P D P + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMSDFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+++ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQDSGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|156085230|ref|XP_001610098.1| u1 snRNP [Babesia bovis T2Bo]
gi|154797350|gb|EDO06530.1| u1 snRNP, putative [Babesia bovis]
Length = 247
Score = 152 bits (383), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 95/225 (42%), Positives = 134/225 (59%), Gaps = 33/225 (14%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE---PGDPLYAPPVEKAE 96
G+ +LL LF+ R PLEY PP E G+A +V +F++ P DP + P ++A+
Sbjct: 4 LGMPPHLLVLFQARPPLEYIPPIENGMKKKFNGIADYVGYFSKEQVPPDPPFETPHQRAD 63
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPH-----NDPNVSGDPYKTLFVARLSYETTE 151
++R RI + ++ AE+ A + KYDP +P ++ DPYKTLFV+ + YE TE
Sbjct: 64 K--KKRERIIEHHKKQKAERDAYD-PKYDPALARGATNPWLTHDPYKTLFVSNIPYEVTE 120
Query: 152 SKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTR 211
++ +EF+ YG ++R +R++ D++ N PRGYAFIEY R
Sbjct: 121 KQLWKEFDVYGRVRR---------------------IRMINDRK-NIPRGYAFIEYNDER 158
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
DM AYK+ADGRK+ GRRVLVDVER RTV W P+RLGGG G +R
Sbjct: 159 DMVNAYKRADGRKVSGRRVLVDVERARTVAGWYPKRLGGGKGRSR 203
>gi|324518187|gb|ADY47028.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 311
Score = 151 bits (382), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 117/192 (60%), Gaps = 25/192 (13%)
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RK P ++G+A++V F +P D PP ET ERRAR K + E A K + + +
Sbjct: 26 RKRPKMSGLAEYVHLFEDPKD---TPPKPIFETKEERRARRRKEKEELLAYKIEQGIATW 82
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
P +P + DPYKTLFVAR++YET+ESK++REFE +G I +LI
Sbjct: 83 APAENPTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLI---------------- 126
Query: 185 DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
LV D KPRGYAFIEY H +M AYK+ADG K+DGRRV+VD ERGRT +W
Sbjct: 127 -----LVHDP-NGKPRGYAFIEYQHKENMSEAYKKADGMKIDGRRVVVDYERGRTQKSWL 180
Query: 245 PRRLGGGLGTTR 256
PRRLGGG G TR
Sbjct: 181 PRRLGGGKGDTR 192
>gi|194760326|ref|XP_001962392.1| GF14460 [Drosophila ananassae]
gi|190616089|gb|EDV31613.1| GF14460 [Drosophila ananassae]
Length = 453
Score = 151 bits (381), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 143/231 (61%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|125984041|ref|XP_001355785.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
gi|54644102|gb|EAL32844.1| GA21298 [Drosophila pseudoobscura pseudoobscura]
Length = 457
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 143/231 (61%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAARDPIPFMPPVDKLPHEKKSRGYLGVAHFMTDFEDPED---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195577191|ref|XP_002078456.1| GD22521 [Drosophila simulans]
gi|194190465|gb|EDX04041.1| GD22521 [Drosophila simulans]
Length = 348
Score = 151 bits (381), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 106/231 (45%), Positives = 144/231 (62%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVAKFMADFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|195436995|ref|XP_002066430.1| GK18098 [Drosophila willistoni]
gi|194162515|gb|EDW77416.1| GK18098 [Drosophila willistoni]
Length = 470
Score = 150 bits (380), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/231 (45%), Positives = 142/231 (61%), Gaps = 28/231 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A F++ F +P D P + ET
Sbjct: 5 LPPNLLALFAAREPIPFMPPVDKLPHEKKSRGYLGVANFMADFEDPQD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKMATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+E+ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQESGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++SG
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHSG 211
>gi|156101519|ref|XP_001616453.1| U1 small nuclear ribonucleoprotein 70 kDa [Plasmodium vivax Sal-1]
gi|148805327|gb|EDL46726.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Plasmodium
vivax]
Length = 452
Score = 150 bits (379), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 88/217 (40%), Positives = 124/217 (57%), Gaps = 26/217 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R L + P +K+K +G++++++ F E +P PP K E
Sbjct: 4 IGMPPHILILFQARPLLSFYKPIQKKKPQAYSGISEYLNLF-EDKEP---PPKIKLENAK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER+ R K ++ E K YDP + +++ DP KT+F+ RLSY+ E K+K+EFE
Sbjct: 60 ERKERKKKEKITYNELMLKEMRKSYDPFKNADLTNDPKKTIFIGRLSYDVNEKKLKKEFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YG IK KV+++ DK KP+GY FIE+ HT+ AY
Sbjct: 120 VYGKIK---------------------KVKIIYDKNF-KPKGYGFIEFEHTKSFNDAYNL 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
ADG+K+D RR+LVDVERGRTV NW PRRLGGG G R
Sbjct: 158 ADGKKIDNRRILVDVERGRTVKNWIPRRLGGGKGPPR 194
>gi|242761917|ref|XP_002340274.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
gi|218723470|gb|EED22887.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces stipitatus
ATCC 10500]
Length = 381
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/215 (43%), Positives = 124/215 (57%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K ++G+A V + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPDDCKKSTISGVAGLVGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RRAR+ + E+ E ++KYDP ND + GDP++TLFVARLSY+ ES ++RE
Sbjct: 62 WLQRRARLKLEKKERMERLLTEGVEKYDPSNDAQIRGDPFRTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE---TNKP-RGYAFIEYMHTRDM 213
F +GPI E++R+V D E + KP RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDTEKQNSKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 195
>gi|348686235|gb|EGZ26050.1| hypothetical protein PHYSODRAFT_285141 [Phytophthora sojae]
Length = 233
Score = 149 bits (377), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 82/153 (53%), Positives = 100/153 (65%), Gaps = 23/153 (15%)
Query: 119 EELKKYDPHN-DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
E+ K+DP+ DP + D YKTLFV R+SYETTE +++ EFE YGP+K
Sbjct: 10 EDRAKWDPNAEDPRKTQDAYKTLFVGRISYETTEQQLRHEFEQYGPVK------------ 57
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
VRLV D E K RGY F+EY DMKAAYK ADG+K+DGRRV+VDVERG
Sbjct: 58 ---------SVRLVEDPE-GKSRGYGFVEYEKEEDMKAAYKYADGKKIDGRRVVVDVERG 107
Query: 238 RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
RTV +W PR+ GGG+ TR GG +VN +YSGRE
Sbjct: 108 RTVRDWLPRKFGGGISETRKGGADVNVKYSGRE 140
>gi|261189727|ref|XP_002621274.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239591510|gb|EEQ74091.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis
SLH14081]
gi|239612961|gb|EEQ89948.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ER-3]
gi|327352134|gb|EGE80991.1| U1 small nuclear ribonucleoprotein [Ajellomyces dermatitidis ATCC
18188]
Length = 422
Score = 149 bits (376), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 94/217 (43%), Positives = 127/217 (58%), Gaps = 34/217 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ + + G+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPADRAPDDIEPSKIGGVAQFVDELQKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + + K + E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ ++RE
Sbjct: 62 WLQRKARLKEEKKAKLEKHLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYMHTR 211
F +GPI E++R+V D K KP RGYAFI Y +
Sbjct: 122 FGRFGPI---------------------ERIRIVVDTHNPKKNPKKPHRGYAFIVYEREQ 160
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 DMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|388857223|emb|CCF49236.1| related to SNP1-U1 small nuclear ribonucleoprotein [Ustilago
hordei]
Length = 364
Score = 149 bits (375), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 99/251 (39%), Positives = 125/251 (49%), Gaps = 68/251 (27%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK-----------------------RKCPPLTGMAQFVS 78
L +L++LF PR PLEY P + R PLTG+A V
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPISRHDRNPAATPLTKDASLLSSSHRRRIRTPLTGVAATVE 64
Query: 79 HFAE----------------PGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELK 122
A L PV E E K R EK A K + L+
Sbjct: 65 RIASDTAAAGTSTDDIAVETSTSNLTHAPVTLTEIAAE------KTRAEKAAIKT-KGLE 117
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
Y P+ + N + DPYKTLF+ARLSY+TTE + R+FE YGPI
Sbjct: 118 TYKPNQNANATADPYKTLFLARLSYDTTEKDLHRQFEVYGPI------------------ 159
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
+++ L+ +K+ K RGYAFI Y RDMKAAYK A+G K++GRRV+VDVERGRTV +
Sbjct: 160 ---QQITLIRNKQ-GKSRGYAFIAYESERDMKAAYKDAEGIKINGRRVMVDVERGRTVKD 215
Query: 243 WRPRRLGGGLG 253
W+P RLGGGLG
Sbjct: 216 WKPTRLGGGLG 226
>gi|71030936|ref|XP_765110.1| U1 small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68352066|gb|EAN32827.1| U1 small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 227
Score = 148 bits (374), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 129/226 (57%), Gaps = 35/226 (15%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ +LL LF+ R PL++ P + + G+A F+ F D P E ETP
Sbjct: 4 LGMPPHLLVLFQARPPLQHVDPLPSKPVRQIDGLAGFLDSF----DAETPPKKEPFETPR 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYETT 150
+RR + + L K E+ + +YDP DP + + DPY+TLFVA ++Y+ T
Sbjct: 60 QRRDKRKRETLLKYKEELKKRASEYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHT 210
E ++ +EF++YG I+R VR++ D+ +NKPRGYAFIEY +
Sbjct: 120 EKQLSKEFQTYGKIRR---------------------VRMIHDR-SNKPRGYAFIEYENE 157
Query: 211 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
RDM AYK+ADG+K+ GRRV+VDVER RTV W PRRLGGG G +R
Sbjct: 158 RDMVTAYKRADGKKISGRRVIVDVERARTVEGWLPRRLGGGKGKSR 203
>gi|195050851|ref|XP_001992981.1| GH13577 [Drosophila grimshawi]
gi|193900040|gb|EDV98906.1| GH13577 [Drosophila grimshawi]
Length = 465
Score = 148 bits (374), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 104/230 (45%), Positives = 142/230 (61%), Gaps = 28/230 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ + PP P ++K G+A+F+ F +P D P + ET
Sbjct: 5 LPPNLLALFASRDPIPFMPPVDKLPHEKKSRGYLGVAKFMDDFEDPKD---TPLPKTVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K E+ +DP N + DP++TLF+AR++Y+T+ESK++RE
Sbjct: 62 RQERLERRRREKAEQVAYKLEREIALWDPTEIKNATEDPFRTLFIARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE YGPIK+++ L+ D+++ KP+GYAFIEY H RDM AAY
Sbjct: 122 FEFYGPIKKIV---------------------LIHDQDSGKPKGYAFIEYEHERDMHAAY 160
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYS 267
K ADG+K+D +RVLVDVER RTV W PRRLGGGLG TR GG +VN ++S
Sbjct: 161 KHADGKKIDSKRVLVDVERARTVKGWLPRRLGGGLGGTRRGGNDVNIKHS 210
>gi|71021383|ref|XP_760922.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
gi|46100873|gb|EAK86106.1| hypothetical protein UM04775.1 [Ustilago maydis 521]
Length = 342
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 98/244 (40%), Positives = 129/244 (52%), Gaps = 56/244 (22%)
Query: 42 LTANLLKLFEPRAPLEYKPP-----PEKRKCP----------------PLTGMAQFVSHF 80
L +L++LF PR PLEY P P+ P PLTG+A ++
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPIRRYDPDPNAVPLSKDGTQISRRKTIRTPLTGVASYLERV 64
Query: 81 -------AEPGDPLYAPPVEKAETPVERRARIHKLRLE-KGAEKAAEE---LKKYDPHND 129
E D + + RA + ++ LE + A KAA + L+ Y P N+
Sbjct: 65 KQETADRGESTDDIAL--SSSSSALTLSRATLREIELESRAASKAATKQRGLETYKPSNN 122
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P+ + D YKTLF+ARL Y TES + REF+ YGPI E+++
Sbjct: 123 PDATPDAYKTLFLARLDYSVTESDLHREFDMYGPI---------------------EQIK 161
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
L+ DK K RGYAFI Y RDMKAAYK A+G K++GRRV+VDVERGRTV +W+P RLG
Sbjct: 162 LIRDKN-GKSRGYAFIAYERERDMKAAYKDAEGIKINGRRVMVDVERGRTVKDWKPTRLG 220
Query: 250 GGLG 253
GGLG
Sbjct: 221 GGLG 224
>gi|441629223|ref|XP_003269806.2| PREDICTED: U1 small nuclear ribonucleoprotein 70 kDa [Nomascus
leucogenys]
Length = 350
Score = 147 bits (371), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/147 (61%), Positives = 107/147 (72%), Gaps = 21/147 (14%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+DPHNDPN GD +KTLFVAR++Y+TTESK++REFE YGPIKR
Sbjct: 2 WDPHNDPNAQGDAFKTLFVARVNYDTTESKLRREFEVYGPIKR----------------- 44
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+ +V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV W
Sbjct: 45 ----IHMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 100
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGRE 270
RPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 101 RPRRLGGGLGGTRRGGADVNIRHSGRD 127
>gi|225561665|gb|EEH09945.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 423
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 127/220 (57%), Gaps = 40/220 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYM 208
+REF +GPI E++R+V D K KP RGYAFI Y
Sbjct: 119 EREFGRFGPI---------------------ERIRIVVDTHNPKKNAKKPHRGYAFIVYE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 158 REQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|240275269|gb|EER38783.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H143]
Length = 421
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 127/220 (57%), Gaps = 40/220 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYM 208
+REF +GPI E++R+V D K KP RGYAFI Y
Sbjct: 119 EREFGRFGPI---------------------ERIRIVVDTHNPKKNAKKPHRGYAFIVYE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 158 REQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|452986309|gb|EME86065.1| hypothetical protein MYCFIDRAFT_7010, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 203
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 123/225 (54%), Gaps = 40/225 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-----PGDPLYAPPV 92
L NLL LF+PR PL Y PP PE RK + G+AQF+ E DP+ +
Sbjct: 5 LPPNLLALFQPRPPLRYMPPNDYAPENRKTATVDGVAQFLPALEEYKEEHKDDPVTESWL 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
+K + + K +E G ++ Y P+ D N+ GD +KTLF++RL Y+
Sbjct: 65 QKRDRETMEKQEKQKWLVEGGYKEF------YKPNEDENIRGDAFKTLFISRLPYDVGTK 118
Query: 153 KIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK----ETNKPRGYAFIEYM 208
+++EF +GPI E++R+VTD+ + KPRGYAFI +
Sbjct: 119 DLEKEFGRFGPI---------------------ERIRIVTDRGEGPKKGKPRGYAFILFE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 253
+DMKAAYK++D + GR+VLVDVERGRTV WRPRR GGG+G
Sbjct: 158 REKDMKAAYKESDALYIKGRKVLVDVERGRTVAGWRPRRFGGGMG 202
>gi|145538127|ref|XP_001454769.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422546|emb|CAK87372.1| unnamed protein product [Paramecium tetraurelia]
Length = 308
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 118/199 (59%), Gaps = 26/199 (13%)
Query: 119 EELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNG 174
EELKK ++P DPN++ +PYKTLFV RL+Y TT+ K+++EFE YGPIK
Sbjct: 115 EELKKLLQLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIK--------- 165
Query: 175 GDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
+R++ D +KPRGYAFIEY +K AYK A +++DGR+++VD+
Sbjct: 166 ------------SIRIIRDSTQDKPRGYAFIEYESKNSVKQAYKYAVDKRIDGRKLVVDI 213
Query: 235 ERGRTVPNWRPRRLGGGLGTTRVG-GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDR 293
ERGRT+ WRPRRLGGGLG R EE++++ E R ++ E + +
Sbjct: 214 ERGRTILKWRPRRLGGGLGELRRSRSEELSKKPKEEHVEKDEEDKRRKSKKVEEVKPTKK 273
Query: 294 DRERSRERGRDREREREKS 312
RERSR + + ++RE+S
Sbjct: 274 PRERSRSKSVKKHKKREES 292
>gi|429327719|gb|AFZ79479.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Babesia equi]
Length = 221
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/227 (43%), Positives = 134/227 (59%), Gaps = 36/227 (15%)
Query: 40 TGLTANLLKLFEPRAPLEY-KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
G+ +LL LF+ R PLEY +P PEK K + G++ F S + + P V ETP
Sbjct: 4 LGMPPHLLVLFQARPPLEYVEPMPEKPKRK-IDGLSDFTSFLTKDEE---RPQVVPFETP 59
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYDPHNDP---------NVSGDPYKTLFVARLSYET 149
RR R + RL + + + ++KYDP+ DP ++ DPYKTLFV+ ++YE
Sbjct: 60 KMRRDRKKRKRLTEHMQDLKKRIEKYDPNYDPRLARGSSTPFLTHDPYKTLFVSNIAYEV 119
Query: 150 TESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
TE ++ +EFE YG I+R +R++ D++ NKPRGYAFIE+
Sbjct: 120 TERQLWKEFEVYGRIRR---------------------IRMIYDQD-NKPRGYAFIEFDS 157
Query: 210 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
RDM AAYK+ADGRK+ GRRV+VDVER RTV W PRRLGGG G +R
Sbjct: 158 ERDMVAAYKRADGRKISGRRVVVDVERARTVEGWLPRRLGGGKGPSR 204
>gi|119478256|ref|XP_001259339.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
gi|119407493|gb|EAW17442.1| U1 small nuclear ribonucleoprotein 70 kDa [Neosartorya fischeri
NRRL 181]
Length = 382
Score = 146 bits (369), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 93/213 (43%), Positives = 122/213 (57%), Gaps = 27/213 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y PP PE K + G+A F+ + G+ + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVPPIDRAPEDVKKSSIGGVADFLGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ YDP NDP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WLQRKWRQKLEKKERLNKQLTECLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
F +GPI+R+ I VT K + KP RGYAFI Y +DMKA
Sbjct: 122 FGRFGPIERIRIVKDT------------------VTPKGSKKPHRGYAFIVYEREKDMKA 163
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 164 AYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 196
>gi|145542919|ref|XP_001457146.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424961|emb|CAK89749.1| unnamed protein product [Paramecium tetraurelia]
Length = 315
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 114/199 (57%), Gaps = 35/199 (17%)
Query: 119 EELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNG 174
EELKK ++P DPN++ +PYKTLFV RL+Y TT+ K+++EFE YGPIK
Sbjct: 123 EELKKLLQLWNPFEDPNITSEPYKTLFVGRLNYATTDKKLRKEFEEYGPIK--------- 173
Query: 175 GDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
+R++ D +KPRGYAFIEY +K AYK A +++DGR+++VD+
Sbjct: 174 ------------SIRIIRDSTQDKPRGYAFIEYESKNSVKQAYKYAVDKRIDGRKLVVDI 221
Query: 235 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 294
ERGRT+ WRPRRLGGGLG R R +E S+ P + ED+ +
Sbjct: 222 ERGRTILKWRPRRLGGGLGELR----------RSRSEEISKKPKEEHVEKDEEDKRRKQK 271
Query: 295 RERSRERGRDREREREKSL 313
+E + + RER R KS+
Sbjct: 272 KEEVKPAKKPRERSRSKSV 290
>gi|326426702|gb|EGD72272.1| U1 small nuclear ribonucleoprotein 70 kDa [Salpingoeca sp. ATCC
50818]
Length = 305
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 117/211 (55%), Gaps = 31/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKP-------PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEK 94
L LL LF+PR PL P P E+ PL+G+A +VS F +P D AP E
Sbjct: 5 LPPYLLNLFKPRPPLPQIPEKDLAPEPHERTYNQPLSGVATYVSKFEDPKD---APKAEP 61
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ER+A+ + EK + ++DP DPN GD YKTLFV RL+Y+ TE +
Sbjct: 62 TLNKAERKAKKRQAAEEKNKVVLEKARDEWDPEKDPNAQGDAYKTLFVGRLNYDVTEDDL 121
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+E ESYG ++ +V +V DK + KPRGYAF+E+ H RDM+
Sbjct: 122 LKEMESYGKVR---------------------QVAVVRDKISGKPRGYAFVEFEHERDMR 160
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
AAY+ ADG +L+GRR++VD ERGRTV W P
Sbjct: 161 AAYRYADGMRLNGRRIVVDFERGRTVDGWFP 191
>gi|212529894|ref|XP_002145104.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
gi|210074502|gb|EEA28589.1| U1 small nuclear ribonucleoprotein 70 kDa [Talaromyces marneffei
ATCC 18224]
Length = 382
Score = 146 bits (368), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/212 (41%), Positives = 117/212 (55%), Gaps = 32/212 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K ++G+A + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDCKKSTISGVAALLGELKNYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RRAR + E+ E ++KYDP D + GDP++TLFVARLSY+ ES ++RE
Sbjct: 62 WLQRRARQKLEKKERLERLITEGVEKYDPATDAQIRGDPFRTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+V D E P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDSENPNPKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
KAAYK+ DG ++ RRVLVDVERGRTV W+P
Sbjct: 161 KAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 192
>gi|323447116|gb|EGB03066.1| hypothetical protein AURANDRAFT_34517 [Aureococcus anophagefferens]
Length = 229
Score = 145 bits (366), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 88/183 (48%), Positives = 115/183 (62%), Gaps = 15/183 (8%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-----SGDPYKTLFVARLSYETTESKI 154
ERRA++ + E + A + +DP P+ +GD YKTLFVARLSY+TTE K+
Sbjct: 1 ERRAKVKAEKAEAHDARLATAVAAWDPQKPPDAVAPLTTGDAYKTLFVARLSYDTTEKKL 60
Query: 155 KREFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
+REFE +G IK L + + + +G D+ + T PRGYAF+E+ DM
Sbjct: 61 RREFEQFGAIKALRVVHERDPDHEPMEGD--DDALHAGT------PRGYAFVEFERESDM 112
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRV-GGEEVNQRYSGREQE 272
+ AYK+ADGRK+DGRRVLVDVERGRTV NWRPR+LGGGLG+TR G N G + +
Sbjct: 113 RDAYKRADGRKIDGRRVLVDVERGRTVRNWRPRKLGGGLGSTRKRGAAPNNGSRPGGQFQ 172
Query: 273 PSR 275
PSR
Sbjct: 173 PSR 175
>gi|399218189|emb|CCF75076.1| unnamed protein product [Babesia microti strain RI]
Length = 331
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 88/208 (42%), Positives = 122/208 (58%), Gaps = 26/208 (12%)
Query: 41 GLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
G+ ++L LFE R PLE+ P + GMAQ+V F++ P+ P ETP E
Sbjct: 5 GMPPHILALFEARPPLEHLPFADTTLRRKPGGMAQYVKEFSDE-IPV---PQPHFETPKE 60
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR +K ++E + +++YDP + +++ DPYKTLF+ L+YE TE +++ EFE+
Sbjct: 61 RRARKNKEKIEAHLLRQKNLIEQYDPKSGNSLTHDPYKTLFIGNLAYEATERQLRSEFEA 120
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 220
YG IKR +R++ D N PRGYAFIE+ R+M AYK+
Sbjct: 121 YGKIKR---------------------IRIIADANGN-PRGYAFIEFDTEREMVNAYKRG 158
Query: 221 DGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DGRK+ GRRV+VDVER RTV W PRRL
Sbjct: 159 DGRKIAGRRVIVDVERSRTVAGWLPRRL 186
>gi|209877242|ref|XP_002140063.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555669|gb|EEA05714.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 294
Score = 144 bits (363), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 162/304 (53%), Gaps = 35/304 (11%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
GL +LL F+ R PL Y P + + G+A + + D P + E+P
Sbjct: 4 VGLPEDLLCYFQARPPLPYIPNVKTKPHRKYEGIADLIHNIEGIFDKGLPPIIIPFESPR 63
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPN-VSGDPYKTLFVARLSYETTESKIKREF 158
E+R ++ ++L E+ ++++YDP N + ++ DPY TLFV RLSY+TTE +++EF
Sbjct: 64 EKREKLRAIKLATYNEELQIKIREYDPRNTSSDMTDDPYNTLFVGRLSYDTTERTLRKEF 123
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
E+YGPIK+ IC L+TD + +GYAFIEY +K AY+
Sbjct: 124 ETYGPIKK-IC--------------------LITDL-NGQSKGYAFIEYESESSLKEAYR 161
Query: 219 QADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR---VGGEEVNQRYSGREQEPSR 275
++ + +DGR+V+VDVERGRTV NW PRRLGGG G R + S + +
Sbjct: 162 YSN-KVIDGRKVIVDVERGRTVENWLPRRLGGGKGPPRGSETWAKSKKNSISRQSNQSYC 220
Query: 276 GPSRSAEPRIREDR-HGD-RDRERSRER-GRDREREREKSLELSHDRPRDRDHRDDRHHR 332
P R+++ +RE R HG R+R ++ R GR +++ + S++ +R H R H
Sbjct: 221 APYRNSDSYLREQRPHGGYRNRYKANSRPGRSDKQKYSDQYQHSYN---NRGHF--RGHS 275
Query: 333 DRDR 336
RDR
Sbjct: 276 TRDR 279
>gi|403222137|dbj|BAM40269.1| U1 small nuclear ribonucleoprotein [Theileria orientalis strain
Shintoku]
Length = 222
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 93/228 (40%), Positives = 128/228 (56%), Gaps = 39/228 (17%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFA--EPGDPLYAPPVEKAET 97
G+ +LL LF+ R PLE P + + G++ F+ F+ EP P E ET
Sbjct: 4 LGMPPHLLVLFQARPPLERVDPLPNKPVRQIDGISDFLDSFSKEEP------PKKEPFET 57
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYE 148
P +RR + + RL + E+ ++ YDP DP + + DPY+TLFVA ++YE
Sbjct: 58 PRQRRDKRKRERLIRYEEELKRRVESYDPKYDPRLARGGTSSWLTHDPYRTLFVANIAYE 117
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE ++ +EFE YG I+R VR++ D++ NKPRGYAFIE+
Sbjct: 118 VTERQLCKEFEVYGKIRR---------------------VRMIHDRK-NKPRGYAFIEFE 155
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
RDM AYK+ DG+K+ GRRV+VDVER RTV W PRRLGGG G +R
Sbjct: 156 SERDMVLAYKRGDGKKISGRRVIVDVERARTVEGWLPRRLGGGKGRSR 203
>gi|84994904|ref|XP_952174.1| U1 small nuclear ribonucleoprotein 70 kDa [Theileria annulata
strain Ankara]
gi|65302335|emb|CAI74442.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Theileria
annulata]
Length = 227
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 92/226 (40%), Positives = 128/226 (56%), Gaps = 35/226 (15%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ +LL LF+ R PL++ P + + G+ F+ F P P ETP
Sbjct: 4 LGMPPHLLVLFQARPPLQHVDPLPSKPIRQIDGLCGFLDSFNSETPPKKEP----FETPR 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV---------SGDPYKTLFVARLSYETT 150
+RR + + RL K E+ ++ +YDP DP + + DPY+TLFVA ++Y+ T
Sbjct: 60 QRRDKRKRERLLKYKEELKKKASQYDPSYDPRLARGGTSSWLTHDPYRTLFVANIAYDVT 119
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHT 210
E ++ +EF++YG I+R VR++ D+ +NKPRGYAFIEY
Sbjct: 120 EKQLSKEFQTYGKIRR---------------------VRMIHDR-SNKPRGYAFIEYESE 157
Query: 211 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
RDM AYK+ADGRK+ GRRV+VDVER RTV W PRRLGGG G +R
Sbjct: 158 RDMVTAYKRADGRKISGRRVIVDVERARTVEGWLPRRLGGGKGKSR 203
>gi|325091104|gb|EGC44414.1| U1 small nuclear ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 452
Score = 144 bits (362), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 95/220 (43%), Positives = 127/220 (57%), Gaps = 40/220 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYM 208
+REF +GPI E++R+V D K KP RGYAFI Y
Sbjct: 119 EREFGRFGPI---------------------ERIRIVVDTHNPKKNAKKPHRGYAFIVYE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DMKAAYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 158 REQDMKAAYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|357627216|gb|EHJ76977.1| hypothetical protein KGM_19833 [Danaus plexippus]
Length = 392
Score = 143 bits (361), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 111/255 (43%), Positives = 141/255 (55%), Gaps = 52/255 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P+ Y PP P ++K G+ F++ F P + PP + ET
Sbjct: 5 LPPNLLALFAARDPIPYLPPAAKLPHEKKQKGYDGVGAFLNVFEHPSE---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K +E+ +DP + +GDP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERLERRRRERAEQTAYKLEQEIALWDPTTNAKATGDPFKTLFVARVNYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM---- 213
FE YGPIK K+ +V KE KPRGYAFIEY H RDM
Sbjct: 122 FEGYGPIK---------------------KIHMVYSKENGKPRGYAFIEYEHERDMHSAQ 160
Query: 214 --------------------KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 253
AYK ADG+K+DG+RVLVDVER RTV W PRRLGGGLG
Sbjct: 161 AASASALLQEGRSQRPRSAIVTAYKHADGKKIDGKRVLVDVERARTVKGWLPRRLGGGLG 220
Query: 254 TTRVGGEEVNQRYSG 268
TR GG +VN ++SG
Sbjct: 221 GTRRGGADVNIKHSG 235
>gi|213410617|ref|XP_002176078.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
gi|212004125|gb|EEB09785.1| U1 snRNP-associated protein Usp101 [Schizosaccharomyces japonicus
yFS275]
Length = 270
Score = 143 bits (360), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 126/211 (59%), Gaps = 30/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L N+L LF PR L Y PP P +R P ++G+A ++ FA+ D Y P ++
Sbjct: 5 LPPNILALFAPRPQLRYLPPTDVSPGERATPRVSGIAAYL-QFAKTHDNDYKP----TQS 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R + + K EK E K+++P D N+ GDPYKT+F+ RLSY+T ES+I+RE
Sbjct: 60 LEEQRLLRKEEKQRKHVEKLREMRKRWNPDEDRNIVGDPYKTIFIGRLSYDTKESEIERE 119
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F YGPI R +R+V DK+++KPRGYAF+ + RD+KAAY
Sbjct: 120 FIRYGPIDR---------------------IRIVRDKDSDKPRGYAFVVFERERDLKAAY 158
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ +D ++GR+V+VDVERGRTV +W PRRL
Sbjct: 159 RASDRLYINGRKVVVDVERGRTVKDWYPRRL 189
>gi|294955087|ref|XP_002788400.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
gi|239903800|gb|EER20196.1| u1 small nuclear ribonucleoprotein 70 kd, putative [Perkinsus
marinus ATCC 50983]
Length = 877
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 124/210 (59%), Gaps = 33/210 (15%)
Query: 41 GLTANLLKLFEPRAPLEYKPPPEKRKCPP----LTGMAQFVSHFAEPGDPLYAPPVEKAE 96
G+ +LL LF PR P Y+ P + RK P LTG+A FV +F E G+P P E E
Sbjct: 5 GMPPHLLALFCPRPPQAYEKP-QIRKAPVTAHHLTGLADFVEYF-EGGEP---PEREHGE 59
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
TP+ER+ R ++ E+ E LK Y P N+ VSGDP+KTLFVAR++YETTE +++
Sbjct: 60 TPLERKKR-RAKEKKEKYEELIERLKADYKPQNNDKVSGDPFKTLFVARVAYETTEKQLQ 118
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
R F YGPI+ KV ++ D E + RGYAFIEY + +K
Sbjct: 119 RIFGEYGPIR---------------------KVTIIHDLE-GRSRGYAFIEYDNENSLKQ 156
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
AYK ADG K+DGRRVLVDVERGRTV W P
Sbjct: 157 AYKNADGIKVDGRRVLVDVERGRTVSGWIP 186
>gi|154283073|ref|XP_001542332.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410512|gb|EDN05900.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 371
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 125/220 (56%), Gaps = 40/220 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP P+ K + G+AQF+ + + + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPSDRAPDDIKPSNIGGVAQFLDELRKYDEEV---PYNATES 61
Query: 98 PVERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
++R+AR+ KL +E+ E LK+Y+P+NDP V GD +KTLFV+RLSY+ TE+ +
Sbjct: 62 WLQRKARLKEEKKLNIER---HLTEGLKEYNPNNDPQVRGDAFKTLFVSRLSYDVTEADL 118
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP-RGYAFIEYM 208
+REF +GPI E++R+V D KP RGYAFI Y
Sbjct: 119 EREFGRFGPI---------------------ERIRIVVDTHNPKNNAKKPHRGYAFIVYE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DMKAAYK DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 158 REQDMKAAYKVTDGIRIKDRRVLVDVERGRTVKGWKPRRF 197
>gi|338710246|ref|XP_001917325.2| PREDICTED: LOW QUALITY PROTEIN: u1 small nuclear ribonucleoprotein
70 kDa-like [Equus caballus]
Length = 470
Score = 142 bits (358), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 120/241 (49%), Positives = 143/241 (59%), Gaps = 42/241 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP------------PEKRKCPPLTGMAQFVSHFAEPGDPLYA 89
L L L PR PL PP P PP G GDP A
Sbjct: 36 LPPTFLALLAPRDPLPSPPPREKPPKKKHTNHPTCAIAPPPRGFG---------GDPRDA 86
Query: 90 PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYET 149
PP +AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+T
Sbjct: 87 PPPTRAETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDT 146
Query: 150 TESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
TESK++REFE YGPIKR + +V K + KPRGYAFIEY H
Sbjct: 147 TESKLRREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEH 185
Query: 210 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGR 269
RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR
Sbjct: 186 ERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGR 245
Query: 270 E 270
+
Sbjct: 246 D 246
>gi|315042121|ref|XP_003170437.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
gi|311345471|gb|EFR04674.1| U1 small nuclear ribonucleoprotein [Arthroderma gypseum CBS 118893]
Length = 405
Score = 141 bits (355), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 121/215 (56%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKSSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ A++ E L ++P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKQEQAAKRLEEGLSTFNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+V D + P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDTQNPNPKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RR LVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRALVDVERGRTVKGWKPRRF 195
>gi|66475310|ref|XP_627471.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
gi|32398687|emb|CAD98647.1| U1 small nuclear ribonucleoprotein, possible [Cryptosporidium
parvum]
gi|46228935|gb|EAK89784.1| U1 snrp Snp1p. RRM domain containing protein [Cryptosporidium
parvum Iowa II]
Length = 281
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 123/222 (55%), Gaps = 31/222 (13%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G++ +LLK F+ R PL Y P P +R P G+A ++ + D + PP E +
Sbjct: 4 VGMSNDLLKFFQARPPLPYVPYPNRRPHKPYQGLADLINENPDLFDKVNTPP----EPYI 59
Query: 100 ERRAR--IHKL-RLEKGAEKAAEELKKYDPH--NDPNVSGDPYKTLFVARLSYETTESKI 154
++ R KL R++ + ++++ Y+P N N + DPY TLF+ARL+Y+TTE +
Sbjct: 60 SKKMRRETEKLQRIQNYMKDMRKKIESYNPMEENVDNKTFDPYNTLFIARLNYDTTERTL 119
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
KRE E YG I L R+V D + + RGYAF+E+ + +K
Sbjct: 120 KRELEVYGKILNL---------------------RIVKDFQ-GESRGYAFVEFDNEDSLK 157
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYK + + +DG +VLVDVERGRTV NW P+RLGGGLG R
Sbjct: 158 EAYKSFNKKSIDGWKVLVDVERGRTVENWLPKRLGGGLGKVR 199
>gi|67623601|ref|XP_668083.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis TU502]
gi|54659281|gb|EAL37866.1| U1 small nuclear ribonucleoprotein [Cryptosporidium hominis]
Length = 281
Score = 140 bits (352), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/222 (38%), Positives = 123/222 (55%), Gaps = 31/222 (13%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G++ +LLK F+ R PL Y P P +R P G+A ++ + D + PP E +
Sbjct: 4 IGMSNDLLKFFQARPPLPYVPYPNRRPHKPYQGLADLINENPDLFDKVNTPP----EPYI 59
Query: 100 ERRAR--IHKL-RLEKGAEKAAEELKKYDPHNDP--NVSGDPYKTLFVARLSYETTESKI 154
++ R KL R++ + ++++ Y+P D N + DPY TLF+ARL+Y+TTE +
Sbjct: 60 SKKMRRETEKLQRIQNYMKDMRKKIESYNPMEDNVDNKTFDPYNTLFIARLNYDTTERTL 119
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
KRE E YG I L R+V D + + RGYAF+E+ + +K
Sbjct: 120 KRELEVYGKILNL---------------------RIVKDFQ-GESRGYAFVEFDNEDSLK 157
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
AYK + + +DG +VLVDVERGRTV NW P+RLGGGLG R
Sbjct: 158 EAYKSFNKKSIDGWKVLVDVERGRTVENWLPKRLGGGLGKVR 199
>gi|258567044|ref|XP_002584266.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905712|gb|EEP80113.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 397
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 117/212 (55%), Gaps = 36/212 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L ANLL LF PR PL+Y P PE + + G+AQF+ + + P E+
Sbjct: 5 LPANLLALFAPRPPLKYLKPIDRAPEDTRPSDIGGVAQFLGELQNYAEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR + E+ E L+KYDP++DP V GDP++TLFV+RLSY+ ES ++RE
Sbjct: 62 WLQRKARQKLEKKEQLERYITEGLEKYDPNSDPQVRGDPFRTLFVSRLSYDVKESDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+VTD P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVTDPSNTNPKKKHRGYAFIVYEREQDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
K+ DG ++ RRVLVDVERGRTV W+P
Sbjct: 161 ----KETDGIRIKDRRVLVDVERGRTVKGWKP 188
>gi|296816264|ref|XP_002848469.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
gi|238841494|gb|EEQ31156.1| U1 small nuclear ribonucleoprotein [Arthroderma otae CBS 113480]
Length = 414
Score = 139 bits (351), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 84/215 (39%), Positives = 121/215 (56%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ A L +Y+P DP + GDP++TLFV+RLSYE E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQAEKRLAAGLTEYNPSEDPQIRGDPFRTLFVSRLSYEVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+V D + P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDTKNPNPKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RR LVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRALVDVERGRTVKGWKPRRF 195
>gi|328858676|gb|EGG07788.1| hypothetical protein MELLADRAFT_35320 [Melampsora larici-populina
98AG31]
Length = 203
Score = 139 bits (350), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 95/217 (43%), Positives = 127/217 (58%), Gaps = 36/217 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLY--APPVEKAETP- 98
L NLLKLF PRAPL Y P + P ++ + ++ + D L A + + ET
Sbjct: 7 LPPNLLKLFAPRAPLPYCKPLGRD--PDVSIHKKHITCVSPLLDQLKLDAATINEDETLT 64
Query: 99 ------VERRARIHKLRLEKGAEKAA-EELKKYDPHNDPNVSGDPYKTLFVARLSYETTE 151
ERR + R+++ EKA+ +E YDP DPN +GDPY+TLF++RLS+E TE
Sbjct: 65 DSMQVQFERR---QEDRIKRKEEKASRQETCGYDPKEDPNATGDPYRTLFISRLSFEATE 121
Query: 152 SKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTR 211
S +K+EF+ YGPI EK+ +V +K T K RGYAFI + +
Sbjct: 122 SDLKKEFDMYGPI---------------------EKLLIVKNKLTGKSRGYAFILFEREK 160
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DMKAAYK A+G K+ GRR+LVDVERGRTV W+PRRL
Sbjct: 161 DMKAAYKDAEGLKIKGRRILVDVERGRTVKGWKPRRL 197
>gi|167517869|ref|XP_001743275.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778374|gb|EDQ91989.1| predicted protein [Monosiga brevicollis MX1]
Length = 383
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 117/209 (55%), Gaps = 33/209 (15%)
Query: 49 LFEPRAPLEYKPPP-------EKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-EKAETPVE 100
LFEP P+++ P E++ PLTG++ ++ F P P V + ET
Sbjct: 12 LFEPGPPIKHVPAAELQVENFERKYNAPLTGISAYLDQFETTAPP---PRVGQFLETREA 68
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
R+ R K +E+ + + L+ + P +P + DP+KTLFV RLSY E +K+EF +
Sbjct: 69 RKQRKAKEAIERQEPQLSAALEAWKPKENPKATSDPFKTLFVGRLSYALDEEVLKKEFST 128
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQA 220
YGP+K V LV D + K RGYAFIE+ H D+KAAYK
Sbjct: 129 YGPVK---------------------DVSLVRDAD-GKSRGYAFIEFEHENDLKAAYKYG 166
Query: 221 DGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
DGRK++GRRV+VDVERGRTV +W+PRRLG
Sbjct: 167 DGRKIEGRRVVVDVERGRTVDDWKPRRLG 195
>gi|121714030|ref|XP_001274626.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
gi|119402779|gb|EAW13200.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus clavatus
NRRL 1]
Length = 377
Score = 139 bits (349), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 29/212 (13%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQ++ + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVHPIDRAPEDVKKSTIGGIAQYLGEVKNYEEEI---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + EK ++ E L+ YDP ND GDP++TLFVARLSY+ E+ ++RE
Sbjct: 62 WLQRKWRQKLEQKEKLGKQLTESLQVYDPSNDSQARGDPFRTLFVARLSYDVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI E+V VT K + KP RGYAFI Y +DMKAA
Sbjct: 122 FGRFGPI---------------------ERVHTVTPKGSKKPHRGYAFIVYEREKDMKAA 160
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
YK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 161 YKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 192
>gi|327292644|ref|XP_003231020.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
gi|326466826|gb|EGD92279.1| U1 small nuclear ribonucleoprotein [Trichophyton rubrum CBS 118892]
Length = 405
Score = 138 bits (348), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+V D + P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDTKNPNPKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RR LVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRALVDVERGRTVKGWKPRRF 195
>gi|343426198|emb|CBQ69729.1| related to SNP1-U1 small nuclear ribonucleoprotein [Sporisorium
reilianum SRZ2]
Length = 336
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 107/291 (36%), Positives = 137/291 (47%), Gaps = 61/291 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCP------------PLTGMAQFVSHF----- 80
L +L++LF PR PLEY P P P PLTG+A +
Sbjct: 5 LPPSLIRLFAPRPPLEYVAPLRYDPSPSSAPRSKDPSQPTVRAPLTGVAATLERIKQDAA 64
Query: 81 --AEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE----LKKYDPHNDPNVSG 134
E D + + + + RA + ++ LE A L+ Y P ++ +
Sbjct: 65 DRGESTDDIAQ--LTSSSSYTLSRATLREIELEARRAAKAATKQRGLETYAPASNAAATP 122
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK 194
D YKTLF+ARLSY+ TE + REF+ YGPI E +RLV D+
Sbjct: 123 DAYKTLFLARLSYDVTEKDLHREFDMYGPI---------------------ETIRLVRDR 161
Query: 195 ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGT 254
K RGYAFI Y RDMKAAYK ADG K+ GRRV+VDVERGRTV +W+P RLGGGLG
Sbjct: 162 N-GKSRGYAFIAYERERDMKAAYKDADGIKIHGRRVMVDVERGRTVKDWKPMRLGGGLGG 220
Query: 255 TRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDR 305
T R ++ EP+ P + P G R R RG R
Sbjct: 221 T--------SRKPKKQPEPAETPLLAPAPAFAGG--GFRGTARGGFRGSAR 261
>gi|403357639|gb|EJY78448.1| U1 small nuclear ribonucleoprotein 70 kDa [Oxytricha trifallax]
Length = 426
Score = 138 bits (348), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 86/233 (36%), Positives = 123/233 (52%), Gaps = 51/233 (21%)
Query: 33 LIGQSHPTGLTAN------LLKLFEPRAPLEYKPPPEKRKCPPL----TGMAQFVSHFA- 81
L+ Q G AN L LF R PLEY+ P EK +C PL G+ + + F
Sbjct: 5 LLLQPSTLGFVANQDMPHHLSILFRARPPLEYQKPIEKGRCKPLRSYFDGVRDYFAMFED 64
Query: 82 --EPGDPLYAPPVEKAETPVERRAR-------IHKLRLEKGAEKAAEELKKYDPHNDPNV 132
E P VEK++ ER + +H+ E+LK+++P+ D +
Sbjct: 65 VNETEKPQQKQEVEKSDVKKERIKKEKIIDHLVHQ----------QEDLKQWNPYKDQKI 114
Query: 133 SGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVT 192
GDP+KT+ V+RLSY+T E +K+EFE YGPIKR VR++
Sbjct: 115 KGDPFKTIVVSRLSYKTDEKTLKKEFEVYGPIKR---------------------VRIII 153
Query: 193 DKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
D+ + KP+GYAFIEY + RD + A ++ +GR++DG RV+VD ERGRT +W P
Sbjct: 154 DQHSGKPKGYAFIEYDNERDFQLALERGNGRRVDGARVVVDYERGRTKTDWIP 206
>gi|326480343|gb|EGE04353.1| U1 small nuclear ribonucleoprotein [Trichophyton equinum CBS
127.97]
Length = 406
Score = 137 bits (346), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 120/215 (55%), Gaps = 32/215 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P P+ K ++G+A ++ + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYLQPISRAPDDVKPSTISGVAGYLDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R+ + E+ ++ E L Y+P DP + GDP++TLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKDRLKMEKREQTTKRLEEGLAAYNPSEDPQIRGDPFRTLFVSRLSYDVKEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRDM 213
F +GPI E++R+V D + P RGYAFI Y +DM
Sbjct: 122 FGRFGPI---------------------ERIRIVKDTKNPNPKKPHRGYAFIVYEREKDM 160
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
KAAYK+ DG ++ RR LVDVERGRTV W+PRR
Sbjct: 161 KAAYKETDGIRIKDRRALVDVERGRTVKGWKPRRF 195
>gi|145544312|ref|XP_001457841.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124425659|emb|CAK90444.1| unnamed protein product [Paramecium tetraurelia]
Length = 305
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 92/143 (64%), Gaps = 21/143 (14%)
Query: 114 AEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCN 173
+E+ + L+ ++P D N++ DPYKTLFV RL++ TT+ K+++EFE YGPIK
Sbjct: 114 SEEVRKRLQTWNPFEDANITSDPYKTLFVGRLNFATTDKKLRKEFEEYGPIK-------- 165
Query: 174 GGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
VR+V D +KPRGYAFIEY +K+AYK A +++DGR+V+VD
Sbjct: 166 -------------SVRIVRDSTHDKPRGYAFIEYESKNSVKSAYKYAVDKRVDGRKVVVD 212
Query: 234 VERGRTVPNWRPRRLGGGLGTTR 256
+ERGRT+ WRPR LGGGLG R
Sbjct: 213 IERGRTILKWRPRYLGGGLGELR 235
>gi|393904658|gb|EFO18286.2| hypothetical protein LOAG_10208 [Loa loa]
Length = 347
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 123/337 (36%), Positives = 156/337 (46%), Gaps = 111/337 (32%)
Query: 45 NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
NLL LFE R PL YKPPP++ RK P ++G+++++ F +P D PP ET E
Sbjct: 8 NLLALFEARPPLPYKPPPDELLIDRKRPKMSGLSEYIHLFEDPKD---TPPKPVYETKEE 64
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR K + E A K + + + P +P+ + DPYKTLFVAR++YET+ESK++REFE
Sbjct: 65 RRARRRKEKEELLAYKIEQGIATWSPAQNPSATVDPYKTLFVARINYETSESKLRREFEQ 124
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA----- 215
+G I RL LV DK KPRGYAFIEY H M
Sbjct: 125 FGKITRL---------------------ALVHDKN-GKPRGYAFIEYQHKESMSVTGIFV 162
Query: 216 -------------------------------AYKQADGRKLDGRRVLVDVERGRTVPNWR 244
AYK+ADG K+DGRRV+VD ERGRT +W
Sbjct: 163 VVVVCCCKWKGSIRYEWSCLSLECTHTSAMEAYKKADGMKIDGRRVVVDYERGRTQKSWL 222
Query: 245 PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRD 304
PRRLGGG G TR R+RE
Sbjct: 223 PRRLGGGKGDTR---------------------------RLRE----------------S 239
Query: 305 REREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE 341
+ +LE++H+ DRDHR HR RDRE
Sbjct: 240 KAVLEAAALEMAHE---DRDHRSSSTHRSYSHDRDRE 273
>gi|19114691|ref|NP_593779.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74675931|sp|O13829.1|RU17_SCHPO RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein usp101; Short=U1 snRNP protein usp101
gi|2388912|emb|CAB11649.1| U1 snRNP-associated protein Usp101 (predicted) [Schizosaccharomyces
pombe]
Length = 261
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 125/211 (59%), Gaps = 30/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYK----PPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L A LL LF PR PL Y PPEKR P ++G+A+++ +A+ D Y P E+
Sbjct: 5 LPAPLLALFAPRPPLRYLPPMDVPPEKRSTPRVSGIAKYLK-YAQSHDQQYHP----TES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
E+R R+ + ++ E+ +K +DP +D +V GDPYKT+F++RLSY+T ES I+RE
Sbjct: 60 LEEKRLRLRDEKQKQQRERLRSMIKVWDPDHDRHVIGDPYKTMFLSRLSYDTKESDIERE 119
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F YGPI E++R+V +K T K GYAF+ + RD+K AY
Sbjct: 120 FTRYGPI---------------------ERIRVVRNKVTGKSMGYAFVVFERERDLKVAY 158
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
K + G L+GRR++VDVERGRTV W PR+L
Sbjct: 159 KASAGLMLNGRRIVVDVERGRTVKGWLPRKL 189
>gi|388580661|gb|EIM20974.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 324
Score = 137 bits (344), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 117/220 (53%), Gaps = 39/220 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-------PGDPLYAP 90
L ANLLKLF PR PL Y P P + K +G+ + + E + +
Sbjct: 5 LPANLLKLFAPRPPLPYAKPLERDPTRSKSNAQSGIGEILHSLKEEQEDRRAKQNGILDE 64
Query: 91 PVEKAETPVERRARIHKLRLEKG------AEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
+E + V + A ++++ + K E L+ Y P D GDP+KTLF+AR
Sbjct: 65 DIESNDLQV-KLAEVYQVAIRKAERQKKRQENFKRALEHYKPTEDIEAIGDPFKTLFIAR 123
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
LS ETTES +++EFE YGPI E+VR+V K+T K RGYAF
Sbjct: 124 LSVETTESDLRKEFEVYGPI---------------------ERVRIVRHKDTGKSRGYAF 162
Query: 205 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
+ + RDMKAAYK A+G K+ G+R+LVDVERGRTV W+
Sbjct: 163 LIFEKERDMKAAYKDAEGLKIHGKRILVDVERGRTVKGWK 202
>gi|67541466|ref|XP_664507.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|40739112|gb|EAA58302.1| hypothetical protein AN6903.2 [Aspergillus nidulans FGSC A4]
gi|259480504|tpe|CBF71696.1| TPA: U1 small nuclear ribonucleoprotein 70 kDa (AFU_orthologue;
AFUA_5G13480) [Aspergillus nidulans FGSC A4]
Length = 373
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 91/217 (41%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L LL LF+PR PL + P P+ K L+G+AQF+ + + Y P AE
Sbjct: 5 LPPPLLALFQPRPPLRWVTPIDRAPDDIKKSKLSGVAQFLPEVKKTAEETEYNP----AE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ++R+ R + E+ + E L YDP++DP GDP+KTLFV+RLSYE TE ++R
Sbjct: 61 TWLQRKLRQKAEKKEQLHKHLTEGLAAYDPNSDPQARGDPFKTLFVSRLSYEATEQDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMK 214
EF +GPI+R+ I VT K KP RGYAFI Y +DMK
Sbjct: 121 EFGRFGPIERIRIVKDT------------------VTPKGAKKPHRGYAFIVYEREKDMK 162
Query: 215 ------AAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
AAYK+ DG ++ RRVLVDVERGRTV W+P
Sbjct: 163 DLIHKLAAYKETDGIRIKDRRVLVDVERGRTVKGWKP 199
>gi|169779457|ref|XP_001824193.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus oryzae
RIB40]
gi|238500103|ref|XP_002381286.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|83772932|dbj|BAE63060.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693039|gb|EED49385.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus flavus
NRRL3357]
gi|391870271|gb|EIT79456.1| U1 small nuclear ribonucleoprotein [Aspergillus oryzae 3.042]
Length = 379
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 118/213 (55%), Gaps = 27/213 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K L G+AQ++ E + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPIDRAPEDCKKSTLGGVAQYLPDLKEYEEEY---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + + E + E + +DP NDP GDP+KTLFV+RLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKQEKKENIEKHLTEGIHTFDPSNDPQARGDPFKTLFVSRLSYDVKESDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
F +GPI+R+ I VT K + KP RGYAFI Y +DMKA
Sbjct: 122 FGRFGPIERIRIVKDT------------------VTPKGSKKPHRGYAFIVYEREKDMKA 163
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 164 AYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 196
>gi|115399498|ref|XP_001215338.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192221|gb|EAU33921.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 376
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/212 (41%), Positives = 119/212 (56%), Gaps = 25/212 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P P+ K + G+A F+ + + + P ++
Sbjct: 5 LPPPLLALFQPRPPLRYVTPLDRAPDDVKKSTIGGIADFLPEIKKYEEEI---PYNATDS 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ +DP DP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKWREKVEKKERLNKQLTEGLENFDPSKDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI+R+ N VT K + KP RGYAFI Y +DMKAA
Sbjct: 122 FGRFGPIERIRIVKDN-----------------VTPKGSKKPHRGYAFIVYEREKDMKAA 164
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
YK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 165 YKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 196
>gi|358374136|dbj|GAA90730.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus kawachii IFO
4308]
Length = 390
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 120/213 (56%), Gaps = 27/213 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQF+ + + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEI---PYTPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E ++ E L+ Y+P ND GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKVEKKENINKQLTEGLESYEPSNDQQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
F +GPI+R+ I +VT K + KP RGYAFI Y +DMKA
Sbjct: 122 FGRFGPIERIRIVKD------------------IVTPKGSKKPHRGYAFIVYEREKDMKA 163
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 164 AYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 196
>gi|340959550|gb|EGS20731.1| U1 small nuclear ribonucleoprotein 70 kDa-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 387
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 89/213 (41%), Positives = 120/213 (56%), Gaps = 24/213 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE+RK P+ G+AQ++ AE Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPIDLPPEQRKTAPIGGLAQYLPKIAE-----YEREYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +ERR R + + E + E K Y+PH DPN+ GD +KTL VARLSYE E ++
Sbjct: 60 ESWLERRDRKKREKAEALKKLLEEGPKNYNPHADPNIRGDAFKTLIVARLSYEADEKDLE 119
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
REF +GPI+R+ D+ KP +K+ RGYAF+ + +DM+A
Sbjct: 120 REFGRFGPIERIRLIR----DTHAHEKP---------NKKIKPHRGYAFVVFEREKDMRA 166
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
A + DG ++ GR + VDVERGRTV W+PRRL
Sbjct: 167 ALEGCDGIRIKGRLIKVDVERGRTVKGWKPRRL 199
>gi|378726735|gb|EHY53194.1| U1 small nuclear ribonucleoprotein 70kDa [Exophiala dermatitidis
NIH/UT8656]
Length = 377
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 86/212 (40%), Positives = 115/212 (54%), Gaps = 34/212 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKR--KCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L NLL LF+PR PL Y PP PE+R K L+G+A F+ F + P E
Sbjct: 5 LPPNLLALFQPRPPLRYIPPQDAAPEERASKKSELSGIAAFLPQFEQYKQEDVYHPTESW 64
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+R+ K+RL AE E+ Y P +DP + GD KTLFV RLSY+ E+ ++
Sbjct: 65 LQKRDRKLWEKKMRL---AEIQREDFSGYRPQDDPKIKGDAAKTLFVGRLSYDVKEADLE 121
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTR 211
REF +GPI E++R+V D+ T KP RGYAFI + +
Sbjct: 122 REFGRFGPI---------------------ERIRIVKDETTPKPKKPHRGYAFIVFEREK 160
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
DM+AAYK+ DG ++ R+V+VDVERGR VP W
Sbjct: 161 DMRAAYKETDGLRIKDRKVVVDVERGRMVPGW 192
>gi|290990125|ref|XP_002677687.1| predicted protein [Naegleria gruberi]
gi|284091296|gb|EFC44943.1| predicted protein [Naegleria gruberi]
Length = 202
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 116/220 (52%), Gaps = 39/220 (17%)
Query: 49 LFEPRAPLEYKPPP-----EKRKCPPLTGMAQFVSHF----AEPGDPLYAPPVEKAETPV 99
LF P P+ + PP +K K L G+++FV F E A +K P
Sbjct: 7 LFTPGPPVSFLPPLDAKRRKKTKHRDLNGISEFVDKFEQEQVEYDAEGQAIRTKKYSMPE 66
Query: 100 ERRARIHK------LRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
RR R +++E K L+ +DP+ND + +P+ TLF+++++YETTE
Sbjct: 67 SRRKRKESRQKDKAIKVENVVRKG---LQDWDPNNDTKATTEPFNTLFISKMNYETTEDT 123
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
++ F +GPIK VR+V D TNK RGYAF+E+ DM
Sbjct: 124 LRNAFGKFGPIK---------------------TVRVVRDASTNKSRGYAFVEFEKHEDM 162
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLG 253
K AYK DG ++D RVLVDVERGRTV +W+PRRLGGGLG
Sbjct: 163 KEAYKLGDGMEIDQWRVLVDVERGRTVKDWKPRRLGGGLG 202
>gi|145249558|ref|XP_001401118.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus niger CBS
513.88]
gi|134081800|emb|CAK42056.1| unnamed protein product [Aspergillus niger]
gi|350639553|gb|EHA27907.1| hypothetical protein ASPNIDRAFT_201684 [Aspergillus niger ATCC
1015]
Length = 389
Score = 135 bits (339), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 90/213 (42%), Positives = 119/213 (55%), Gaps = 27/213 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y P PE K + G+AQF+ + + + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVTPINRAPEDCKKSSIGGIAQFLPEVKKYEEEI---PYTPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E ++ E L+ Y+P ND GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WIQRKLRQKVEKKENINKQLTEGLETYEPSNDQQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
F +GPI+R+ I VT K + KP RGYAFI Y +DMKA
Sbjct: 122 FGRFGPIERIRIVKDT------------------VTPKGSKKPHRGYAFIVYEREKDMKA 163
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AYK+ DG ++ RRVLVDVERGRTV W+PRR
Sbjct: 164 AYKETDGIRIKDRRVLVDVERGRTVKGWKPRRF 196
>gi|145347107|ref|XP_001418019.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578247|gb|ABO96312.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 217
Score = 134 bits (338), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 92/235 (39%), Positives = 125/235 (53%), Gaps = 30/235 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK-RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
L+ +LL++F PRAPL++ PP K +K + G+A V F A KA V
Sbjct: 1 LSPDLLRMFAPRAPLKWCAPPAKPKKTQRMQGVAACVKEFETASKT--ATQKRKAGVYVV 58
Query: 101 RRARIHKLRLEKGAEKAAEELKK-----YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
R AE+ + EL + Y P+ +PN + DPY+TLF+ARL+Y+ E K++
Sbjct: 59 VTKEERAARKRAAAERKSRELIEAGLDGYRPNENPNATSDPYRTLFIARLAYDVDEDKLR 118
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
RE E YG + V+LV D E K RGYAFIE+ DM+A
Sbjct: 119 REAEYYGAV---------------------SDVKLVRD-EKGKSRGYAFIEFEREGDMRA 156
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
AY+ D R+++ RRV+ DVERGRT W PRRLGGG+G TR G + N GR+
Sbjct: 157 AYRGMDDRRIEDRRVIADVERGRTNKGWLPRRLGGGVGRTRAGSKRENVEARGRD 211
>gi|320586925|gb|EFW99588.1| u1 small nuclear ribonucleoprotein [Grosmannia clavigera kw1407]
Length = 428
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 89/212 (41%), Positives = 118/212 (55%), Gaps = 22/212 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF PR PL + P P +R+ P++G+AQF+ E D P E
Sbjct: 5 LPPQLLALFAPRPPLRWVQPVDYAPGERQTIPVSGIAQFLPALKEFKDHDGFVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+A HK EK K E + Y P +DPN+ GDP+KTL VARLSYE TE ++RE
Sbjct: 65 RRERKAEEHKAAEEK---KLTEGPRNYKPADDPNIRGDPFKTLIVARLSYEATEQDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
F YGPI+R+ I + DEK +K+ RGYAF+ + +DM+AA
Sbjct: 122 FARYGPIERIRIIKDTH----------ADEK----GNKKRKPHRGYAFVVFEREKDMRAA 167
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ DG ++ RR+ VDVERGRTV W+P+RL
Sbjct: 168 HDACDGIRIKDRRIKVDVERGRTVKGWKPQRL 199
>gi|412989201|emb|CCO15792.1| U1 small nuclear ribonucleoprotein 70 kDa [Bathycoccus prasinos]
Length = 643
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 94/157 (59%), Gaps = 25/157 (15%)
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK--IKREFESYGPIKRLICNSCNGGD 176
E LK +DPH D +GDPY TLFVARL Y E + ++REFE YG IK
Sbjct: 221 EALKAWDPHKDEKATGDPYATLFVARLPYAACEDEDVLRREFERYGDIK----------- 269
Query: 177 SSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
+R+V D +T KP GYAFIE+ DMK A+ +ADG +++G+RV+VD ER
Sbjct: 270 ----------AIRIVRDTDTGKPTGYAFIEFETEDDMKRAFARADGTRIEGKRVIVDAER 319
Query: 237 GRTVPNWRPRRLGGGLG--TTRVGGEEVNQRYSGREQ 271
GRT PNWRP RLGGGLG T ++ +E+ + G +
Sbjct: 320 GRTTPNWRPMRLGGGLGGYTKQLSKKEIRMKAMGNQS 356
Score = 46.2 bits (108), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 26 ANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKPPPEKRK-CPPLTGMAQFVSHF 80
+N+L + HPTGL NLL +F+ R P+++ PP + RK C LTG+ +++ F
Sbjct: 90 SNLLMRPINLNQHPTGLPPNLLVMFKARPPVKWFPPAKARKTCKRLTGIGKYLYLF 145
>gi|357017377|gb|AET50717.1| hypothetical protein [Eimeria tenella]
Length = 270
Score = 133 bits (335), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 117/204 (57%), Gaps = 26/204 (12%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPV 99
G+ ++L LF+ R PL P + ++ P G+A+++ F E G P P E+P
Sbjct: 4 IGMPPHILALFQAREPLAPLPALKAKQPRPYAGVAEYLKKF-ESGPP---PAASAFESPK 59
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
+R+ R+ + +L ++ + + Y P DP + GDP+ TLFV +LSYET+E K++REFE
Sbjct: 60 QRQQRLKRQKLLLHLQQQQRQAEAYRPLEDPRIQGDPFATLFVGKLSYETSEKKLRREFE 119
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
YGP++R+ G +PRGYAF+E+ RDMK AYK+
Sbjct: 120 VYGPVRRVRVVRDPRG----------------------RPRGYAFVEFERDRDMKEAYKK 157
Query: 220 ADGRKLDGRRVLVDVERGRTVPNW 243
ADG K+DGRRVLVDVER RTVP W
Sbjct: 158 ADGTKIDGRRVLVDVERARTVPGW 181
>gi|346971277|gb|EGY14729.1| U1 small nuclear ribonucleoprotein [Verticillium dahliae VdLs.17]
Length = 416
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 117/220 (53%), Gaps = 37/220 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PPP E+R+ P++G+A F+ AE D P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDKDGYVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + HK +LE+ AAE Y P+ DPN+ GD +KTL VARLSYE E ++RE
Sbjct: 65 MKDRKKQEHKAKLER---LAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP---------RGYAFIEYM 208
F +G I E++R++TD ++ RGYAF+ +
Sbjct: 122 FGRFGNI---------------------ERIRIITDTHAHEKSKNKKKKPHRGYAFVVFE 160
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDM+AA DG ++ RR+ VDVERGRTV W+PRR
Sbjct: 161 RERDMRAALDSCDGIRIKDRRIKVDVERGRTVKGWKPRRF 200
>gi|302410869|ref|XP_003003268.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
gi|261358292|gb|EEY20720.1| U1 small nuclear ribonucleoprotein [Verticillium albo-atrum
VaMs.102]
Length = 413
Score = 132 bits (332), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 86/220 (39%), Positives = 117/220 (53%), Gaps = 37/220 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PPP E+R+ P++G+A F+ AE D P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEQRRTAPVSGIAAFLPALAEYKDQDGYVPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + HK +LE+ AAE Y P+ DPN+ GD +KTL VARLSYE E ++RE
Sbjct: 65 MKDRKKQEHKAKLER---LAAEGPVDYKPNEDPNIRGDAFKTLIVARLSYEANEQDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP---------RGYAFIEYM 208
F +G I E++R++TD ++ RGYAF+ +
Sbjct: 122 FGRFGNI---------------------ERIRIITDTHAHEKSKNKKKKPHRGYAFVVFE 160
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDM+AA DG ++ RR+ VDVERGRTV W+PRR
Sbjct: 161 RERDMRAALDSCDGIRIKDRRIKVDVERGRTVKGWKPRRF 200
>gi|169864290|ref|XP_001838756.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
gi|116500176|gb|EAU83071.1| U1 snRNP 70K protein [Coprinopsis cinerea okayama7#130]
Length = 380
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 95/223 (42%), Positives = 123/223 (55%), Gaps = 38/223 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPG-DPLYAPP----- 91
L NLLKLF PR PL Y P +K + ++G+A+ + E D L+
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVDKDIDRIRKKNVSGVAEILQRLKEENTDSLFNAANNDEQ 66
Query: 92 VEKAETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARL 145
+E+ E PV A K +R E+ + AEE +K Y P +DP GDPYKTLF+ARL
Sbjct: 67 MEEGEEPVFTHAEEVKRQIRREERKARKAEEFRKAKESYKPADDPEAIGDPYKTLFIARL 126
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
TE+ ++REFE YG I E+VR+V DK + RGYAFI
Sbjct: 127 HKSATETDLRREFEGYGTI---------------------ERVRIVRDK-NGRSRGYAFI 164
Query: 206 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
Y RDMKAAYK++DG + G+R+LVDVERGRTV W+PRRL
Sbjct: 165 VYERERDMKAAYKESDGLHIMGKRILVDVERGRTVRGWKPRRL 207
>gi|68064271|ref|XP_674124.1| u1 small nuclear ribonucleoprotein [Plasmodium berghei strain ANKA]
gi|56492466|emb|CAH97184.1| u1 small nuclear ribonucleoprotein, putative [Plasmodium berghei]
Length = 319
Score = 130 bits (326), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 22/138 (15%)
Query: 119 EELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
E+ K+YDP + ++S D KTLF+ RLSYE E K+K+EFE+YG IK
Sbjct: 28 EKKKEYDPFKNNDISSDLKKTLFIGRLSYEVNEKKLKKEFETYGKIKY------------ 75
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
V+++ D++ KPRGYAFIE+ HT+ + AY ADG+K+D RR+LVD+ER R
Sbjct: 76 ---------VKVIYDQDK-KPRGYAFIEFEHTKSVTDAYNLADGKKIDNRRILVDMERAR 125
Query: 239 TVPNWRPRRLGGGLGTTR 256
TV NW RRLGGG G +R
Sbjct: 126 TVKNWILRRLGGGKGPSR 143
>gi|406604132|emb|CCH44355.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Wickerhamomyces ciferrii]
Length = 349
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 22/187 (11%)
Query: 62 PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEEL 121
P++RK +TG+ F+ E Y P + ETPV ++ R + + +K E+
Sbjct: 6 PKERKTAFITGIGSFLDKLKEYKQIDY-PKEQFEETPVLKQQREKREKQLLNKQKLDEDF 64
Query: 122 KKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDG 181
K++P DP++ GDPYKTLFV RL+YE TE +++EF YG +
Sbjct: 65 AKWNPSEDPHIKGDPYKTLFVGRLNYEVTEIDLQKEFSKYGEV----------------- 107
Query: 182 KPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 241
E+VR+V DK+T+K +GYAFI + H KAAYK+A+G K+ GR ++ D+ER RT
Sbjct: 108 ----ERVRVVRDKDTSKSKGYAFILFDHDSSAKAAYKEANGLKIKGRAIITDIERSRTFK 163
Query: 242 NWRPRRL 248
+W PRRL
Sbjct: 164 SWVPRRL 170
>gi|116207864|ref|XP_001229741.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
gi|88183822|gb|EAQ91290.1| hypothetical protein CHGG_03225 [Chaetomium globosum CBS 148.51]
Length = 387
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 115/214 (53%), Gaps = 26/214 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE RK ++G+AQF+ AE Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHAPELRKTAAVSGVAQFLPALAE-----YEREYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +E R R + +L++ E E K Y PH+DPN+ GD +KTL VARL Y E ++
Sbjct: 60 ESWLEARDRKKREKLQQVEEAVTEGPKNYSPHDDPNIRGDAFKTLIVARLDYSADEKDLE 119
Query: 156 REFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
REF +GPI+R+ I + + +K+ RGY F+ + +DM+
Sbjct: 120 REFGRFGPIERIRIIRDTHAHEKG--------------NKKKKPHRGYGFVVFEREKDMR 165
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AA DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 166 AALDGCDGIRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|451851627|gb|EMD64925.1| hypothetical protein COCSADRAFT_25892 [Cochliobolus sativus ND90Pr]
Length = 387
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 87/211 (41%), Positives = 111/211 (52%), Gaps = 31/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+AQ++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RLSY T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGITSDDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP----RGYAFIEYMHTRD 212
EF YGPI+R+ V +T E P RGYAFI + +D
Sbjct: 121 EFGRYGPIERI------------------RIVEDITQPEDAPPKKRKRGYAFIVFEREKD 162
Query: 213 MKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
MKAAYK+ DG K+ RRVLVDVERGRTV W
Sbjct: 163 MKAAYKETDGIKIKDRRVLVDVERGRTVSGW 193
>gi|170099527|ref|XP_001880982.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644507|gb|EDR08757.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 379
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/220 (41%), Positives = 121/220 (55%), Gaps = 42/220 (19%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPG-DPLY----APPV 92
L NLLKLF PR PL Y P +K + + G+AQ ++ E D L A +
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVDKDIDRIRTKHVNGVAQILAQLKEANTDSLISSGTAEAM 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELK----KYDPHNDPNVSGDPYKTLFVARLSYE 148
E+ E P++ +R E+ K EE K Y P +DP GDPYKTLF++RL
Sbjct: 67 EEGEEPLQ-------IRREERKAKKTEEFKLAKSSYKPADDPEAVGDPYKTLFISRLHKT 119
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE+ ++REFE YG I E+VR+V DK+ + RGYAF+ Y
Sbjct: 120 ATETDLRREFEGYGTI---------------------ERVRIVRDKK-GRSRGYAFVVYE 157
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDMKAAYK++DG + G+R+LVDVERGRTV W+PRRL
Sbjct: 158 RERDMKAAYKESDGLHIMGKRILVDVERGRTVRGWKPRRL 197
>gi|255553987|ref|XP_002518034.1| RNA binding protein, putative [Ricinus communis]
gi|223543016|gb|EEF44552.1| RNA binding protein, putative [Ricinus communis]
Length = 216
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/68 (86%), Positives = 61/68 (89%)
Query: 1 MGDYNDAFMRNQNAAVQARTKAQNRANVLQLKLIGQSHPTGLTANLLKLFEPRAPLEYKP 60
MGDYNDAFMRNQNAAV+ TK QNRANVLQLKLIGQSHPTGLTANLLKLFEPR PLEYKP
Sbjct: 1 MGDYNDAFMRNQNAAVRGATKGQNRANVLQLKLIGQSHPTGLTANLLKLFEPRPPLEYKP 60
Query: 61 PPEKRKCP 68
PP + K P
Sbjct: 61 PPREEKVP 68
>gi|260805174|ref|XP_002597462.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
gi|229282727|gb|EEN53474.1| hypothetical protein BRAFLDRAFT_58913 [Branchiostoma floridae]
Length = 173
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/181 (43%), Positives = 100/181 (55%), Gaps = 29/181 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKC-----PPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP +K C P G+ + F +P D PP +AE
Sbjct: 5 LPPNLLALFAPREPIPYLPPTDKLPCEKIRRAPYAGVTPHLQTFEDPKD---TPPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R K +LE A + E++ ++DP ND N SGD YKTLFVAR++Y+T+ESK++R
Sbjct: 62 TRQERLERKRKEKLEAHANRLEEKVSEWDPANDANASGDAYKTLFVARINYDTSESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPI+ +++ D T KPRGYAFIEY H RDM
Sbjct: 122 EFEVYGPIR---------------------SIKMTKDVNTGKPRGYAFIEYEHERDMHCK 160
Query: 217 Y 217
Y
Sbjct: 161 Y 161
>gi|330931076|ref|XP_003303260.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
gi|311320862|gb|EFQ88659.1| hypothetical protein PTT_15402 [Pyrenophora teres f. teres 0-1]
Length = 402
Score = 128 bits (321), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 112/208 (53%), Gaps = 25/208 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YGPI+R+ I +P D ++ + RGYAFI + +DMKA
Sbjct: 121 EFGRYGPIERIRIVEDVT--------QPADAPLK-------KRKRGYAFIVFEREKDMKA 165
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
AYK+ DG K+ RRVLVDVERGRTV W
Sbjct: 166 AYKETDGIKIKDRRVLVDVERGRTVSGW 193
>gi|224004248|ref|XP_002295775.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
gi|209585807|gb|ACI64492.1| U1 small nuclear ribonucleoprotein, U1sRNP protein [Thalassiosira
pseudonana CCMP1335]
Length = 174
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 104/193 (53%), Gaps = 32/193 (16%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAE-TPVERRARIHKLRLEKGAEKAAEELKKYDPHN 128
L+G++ F++HF PP K TP R K + K A ++ Y
Sbjct: 8 LSGVSSFLNHFERT-----TPPQRKINPTPKSLRETKRKTAAVENEGKLAPLIEAYRAEQ 62
Query: 129 DPN----VSG-DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+ +G + Y TLFV RL+YE TE K+ RE ESYGP+K L
Sbjct: 63 SSSGGEFTNGMNCYNTLFVGRLAYEVTERKLLREMESYGPVKDL---------------- 106
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+L+TD +T K RGYAF+EY DMK A++ ADG +L+GR ++VDVERG TVPNW
Sbjct: 107 -----KLITDCKTGKSRGYAFVEYEKEDDMKRAFRAADGMRLEGRAIVVDVERGHTVPNW 161
Query: 244 RPRRLGGGLGTTR 256
PR+ GGGLG TR
Sbjct: 162 LPRKFGGGLGGTR 174
>gi|70997103|ref|XP_753306.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|66850942|gb|EAL91268.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
Af293]
gi|159126968|gb|EDP52084.1| U1 small nuclear ribonucleoprotein 70 kDa [Aspergillus fumigatus
A1163]
Length = 395
Score = 126 bits (317), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/223 (39%), Positives = 115/223 (51%), Gaps = 40/223 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+PR PL Y PP P+ K + G+A F+ + G+ + P E+
Sbjct: 5 LPPPLLALFQPRPPLRYVPPVDRAPDDIKKSSIGGVADFLGELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+ R + E+ ++ E L+ YDP NDP GDP+KTLFVARLSY+ ES ++RE
Sbjct: 62 WLQRKWRQKLEKKERLNKQLTEGLQSYDPSNDPQARGDPFKTLFVARLSYDVKESDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
F +GPI+R+ I VT K + KP RGYAFI Y +DMK
Sbjct: 122 FGRFGPIERIRIVKDT------------------VTPKGSKKPHRGYAFIVYEREKDMKG 163
Query: 216 A-----YKQADGRKLDG--------RRVLVDVERGRTVPNWRP 245
Y + LD RRVLVDVERGRTV W+P
Sbjct: 164 IAATHNYSENSATPLDPKNGIRIKDRRVLVDVERGRTVKGWKP 206
>gi|451995589|gb|EMD88057.1| hypothetical protein COCHEDRAFT_1070524, partial [Cochliobolus
heterostrophus C5]
Length = 247
Score = 125 bits (315), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/208 (41%), Positives = 110/208 (52%), Gaps = 25/208 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+AQ++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKIGGIAQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RLSY T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKNYKPSEDPKVQGDAFKTLFVSRLSYGVTSDDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YGPI+R+ I D P K RGYAFI + +DMKA
Sbjct: 121 EFGRYGPIERIRIVEDIT---QPEDAPPKKRK------------RGYAFIVFEREKDMKA 165
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
AYK+ DG K+ RRVLVDVERGRTV W
Sbjct: 166 AYKETDGIKIKDRRVLVDVERGRTVSGW 193
>gi|452819521|gb|EME26578.1| U1 small nuclear ribonucleoprotein 70kDa [Galdieria sulphuraria]
Length = 259
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 75/207 (36%), Positives = 117/207 (56%), Gaps = 25/207 (12%)
Query: 46 LLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE----PGDPLYAPPVEKAETPVER 101
+++LF PR PL Y PPP+KRK PL G+A + ++ P + E ETP R
Sbjct: 23 VMELFRPREPLPYIPPPKKRKLRPLVGVAPLLDQISQYKQQVNRPRWEENGETFETPAMR 82
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
R R K + EK + + ++Y P ++PN + D KTLF+ARL ETT+ K++ E E++
Sbjct: 83 RERKRKEKREKFLQWKQKLWEQYSPPSEPNATSDAQKTLFIARLKPETTQLKLQAELEAF 142
Query: 162 GPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD 221
G +K +++L ++T P+GYAF+E+ RDM+ A + +
Sbjct: 143 GKVK---------------------EIKLPISQKTGLPKGYAFVEFQKERDMREALRALE 181
Query: 222 GRKLDGRRVLVDVERGRTVPNWRPRRL 248
G+++DG RV+VDVE+ RT NW P++L
Sbjct: 182 GKRIDGARVIVDVEKARTTKNWLPKKL 208
>gi|189199498|ref|XP_001936086.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187983185|gb|EDU48673.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 408
Score = 125 bits (314), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 112/208 (53%), Gaps = 25/208 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P + G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPADHAPEKRCTPKIGGIGQYMDALREYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E +K Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLITEGVKDYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YGPI+R+ I +P D ++ + RGYAFI + +DMKA
Sbjct: 121 EFGRYGPIERIRIVEDVT--------QPADAPLK-------KRKRGYAFIVFEREKDMKA 165
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
AYK+ DG K+ RRVLVDVERGRTV W
Sbjct: 166 AYKETDGIKIKDRRVLVDVERGRTVSGW 193
>gi|396477011|ref|XP_003840172.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
gi|312216743|emb|CBX96693.1| hypothetical protein LEMA_P109580.1 [Leptosphaeria maculans JN3]
Length = 398
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 84/208 (40%), Positives = 111/208 (53%), Gaps = 25/208 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P ++G+ Q++ + D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPTDHAPEKRCTPKISGVGQYLQAMRDYKDQDNYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + E ++ Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLTEGIQNYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YGPI+R+ I + D P K RGYAFI Y +DMKA
Sbjct: 121 EFGRYGPIERIRIVEDIT---APPDAPPKKRK------------RGYAFIVYEREKDMKA 165
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
AYK+ DG K+ RRVLVDVERGRTV W
Sbjct: 166 AYKETDGIKIKDRRVLVDVERGRTVTGW 193
>gi|453087961|gb|EMF16002.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 348
Score = 125 bits (313), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/216 (40%), Positives = 114/216 (52%), Gaps = 43/216 (19%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL + PP P R+ + G+AQFV P VE+A+T
Sbjct: 5 LPHNLLALFQPRPPLRFMPPADFAPGDRRTHRIDGVAQFV--------PALKQKVEEAKT 56
Query: 98 PVERRARIHK---LRLEKGAEK--AAEELKK--YDPHNDPNVSGDPYKTLFVARLSYETT 150
+ K + +EK A++ EE K Y P D N+ GD +KTLFV RL Y+ T
Sbjct: 57 ETITECGLQKRDRMMIEKQAKQKWLLEEGHKEMYKPGEDENIRGDAFKTLFVGRLPYDCT 116
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD---KETNKPRGYAFIEY 207
+++EF +GPI E+VR+VTD K KPRGYAFI +
Sbjct: 117 TKDLEKEFGRFGPI---------------------ERVRIVTDRSEKAKGKPRGYAFILF 155
Query: 208 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+DMKAAYK+ + ++ GR VLVDVERGRTV W
Sbjct: 156 EREKDMKAAYKECERLQIRGRMVLVDVERGRTVTGW 191
>gi|367027924|ref|XP_003663246.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
gi|347010515|gb|AEO58001.1| hypothetical protein MYCTH_2304928 [Myceliophthora thermophila ATCC
42464]
Length = 313
Score = 124 bits (312), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 22/212 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP PE+R+ ++G+AQ++ AE + +Y E+
Sbjct: 5 LPPNLLALFAPRPPLRWVPPCDHPPEERRTASISGVAQYLPAMAE-YERVYE--YHPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+ERR R + + E+ E K Y+PH DPN+ GD +KTL VARL Y E ++RE
Sbjct: 62 WLERRDRKKREKQEQVERLLTEGPKNYNPHADPNIRGDAFKTLIVARLDYNADEKDLERE 121
Query: 158 FESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
F +GPI+R+ I + + +K+ RGY F+ + +DM+AA
Sbjct: 122 FGRFGPIERIRIIRDTHAHEKG--------------NKKQKPHRGYGFVVFEREKDMRAA 167
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 168 LEGCDGIRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|322702160|gb|EFY93908.1| U1 small nuclear ribonucleoprotein [Metarhizium acridum CQMa 102]
Length = 388
Score = 124 bits (311), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 116/217 (53%), Gaps = 38/217 (17%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + +PP PEKRK P+ G+A F+ + + +Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPIDGVAAFLPELQKYKETDVYNP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E + E K Y P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEARDRKKQEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN-KP-------RGYAFIEYM 208
EF +GPI E++R++TD + KP RGYAF+ +
Sbjct: 121 EFGRFGPI---------------------ERIRIITDTHAHEKPNKKKKAHRGYAFVVFE 159
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
+D++AA DG ++ RR+ VDVERGRTV W+P
Sbjct: 160 REKDLRAALDSCDGIRIKDRRIKVDVERGRTVKGWKP 196
>gi|426199137|gb|EKV49062.1| hypothetical protein AGABI2DRAFT_149358 [Agaricus bisporus var.
bisporus H97]
Length = 406
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 121/220 (55%), Gaps = 35/220 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHF-AEPGDPLYAP--PVEK 94
L NLLKLF PR PL Y P ++ + + G+ ++ E + L+ +E+
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDAMEE 66
Query: 95 AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYE 148
E PV A K LR E+ + EE KK Y P +D GDPYKTLF++RL
Sbjct: 67 GEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTLFISRLHKS 126
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE+ ++REFE YG I E+VR+V DK+ N+ RGYAFI Y
Sbjct: 127 ATETDLRREFEGYGTI---------------------ERVRIVRDKK-NRSRGYAFIVYE 164
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDMKAAYK++DG + G+++LVDVERGRTV W+PRRL
Sbjct: 165 RERDMKAAYKESDGLHIMGKKILVDVERGRTVRGWKPRRL 204
>gi|409077798|gb|EKM78163.1| hypothetical protein AGABI1DRAFT_101420 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 406
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 91/220 (41%), Positives = 121/220 (55%), Gaps = 35/220 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHF-AEPGDPLYAP--PVEK 94
L NLLKLF PR PL Y P ++ + + G+ ++ E + L+ +E+
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRAKGVGGVGPILAGLREETTNNLFNTNDAMEE 66
Query: 95 AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYE 148
E PV A K LR E+ + EE KK Y P +D GDPYKTLF++RL
Sbjct: 67 GEEPVFTLAEEVKRQLRREQRKARLEEEFKKAKENYKPADDAEAVGDPYKTLFISRLHKS 126
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE+ ++REFE YG I E+VR+V DK+ N+ RGYAFI Y
Sbjct: 127 ATETDLRREFEGYGTI---------------------ERVRIVRDKK-NRSRGYAFIVYE 164
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDMKAAYK++DG + G+++LVDVERGRTV W+PRRL
Sbjct: 165 RERDMKAAYKESDGLHIMGKKILVDVERGRTVRGWKPRRL 204
>gi|825725|emb|CAA29964.1| hU1-70K-like protein (216 AA) [Homo sapiens]
Length = 216
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 106/184 (57%), Gaps = 29/184 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 55 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 111
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 112 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 171
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EFE YGPIKR + +V K + KPRGYAFIEY H RDM +
Sbjct: 172 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMHST 210
Query: 217 YKQA 220
+ A
Sbjct: 211 TQLA 214
>gi|367049672|ref|XP_003655215.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
gi|347002479|gb|AEO68879.1| hypothetical protein THITE_2118652 [Thielavia terrestris NRRL 8126]
Length = 391
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/214 (37%), Positives = 115/214 (53%), Gaps = 26/214 (12%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE--KA 95
L NLL LF PR PL + PP PE+R+ ++G+AQ++ A Y E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPVDHPPEERRTAAISGVAQYLPALAA-----YEHEYEYHPT 59
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ +ERR R + + + + E KKY+PH DPN+ GD +KTL VARL Y E ++
Sbjct: 60 ESWLERRDRKKREKQAEVEKLLTEGPKKYNPHEDPNIRGDAFKTLIVARLDYNADEKDLE 119
Query: 156 REFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
REF +GPI+R+ I + + +K+ RGY F+ + +DM+
Sbjct: 120 REFGRFGPIERIRIIRDTHAHEKG--------------NKKQKPHRGYGFVVFEREKDMR 165
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
AA DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 166 AALDGCDGIRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|30802167|gb|AAH51414.1| Snrnp70 protein [Mus musculus]
Length = 186
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/183 (45%), Positives = 105/183 (57%), Gaps = 33/183 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 3 LPPNLLALFAPRDPIPYLPPLEKL--PHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 57
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 58 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 117
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE YGPIKR + +V K + KPRGYAFIEY H RDM
Sbjct: 118 RREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMH 156
Query: 215 AAY 217
Y
Sbjct: 157 CEY 159
>gi|449301882|gb|EMC97891.1| hypothetical protein BAUCODRAFT_31906 [Baudoinia compniacensis UAMH
10762]
Length = 363
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/210 (41%), Positives = 116/210 (55%), Gaps = 23/210 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEP-GDPLYAPPVEKAE 96
L NLL LF PR L Y PP PE R+ +TG+A F+ E GD Y P E
Sbjct: 5 LPPNLLALFAPRPALRYLPPADHAPEDRRTARITGVAAFLPALKEEFGD--YKP----TE 58
Query: 97 TPVERRAR--IHKLRLEKGAE-KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
+ +E+R R + K +K + A+EL Y+P D N++GD + TLFV RLSY+T
Sbjct: 59 SWLEKRDRRILEKQEHQKYLTGEGAKEL--YNPTKDENITGDAFSTLFVGRLSYDTDVKD 116
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
++REF +GPI R+ NGG S +D +K R RGYAF+ + R M
Sbjct: 117 LQREFGRFGPIARIRVVQDNGG-SEKDSTRRQKKSR------RGMSRGYAFVVFEQERHM 169
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
KAAYK+ D + GR+VLVDVERGRT+ W
Sbjct: 170 KAAYKETDHLVIRGRKVLVDVERGRTISGW 199
>gi|347826795|emb|CCD42492.1| hypothetical protein [Botryotinia fuckeliana]
Length = 436
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 85/223 (38%), Positives = 118/223 (52%), Gaps = 44/223 (19%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L NLL LF PR PL + PP PE RK ++G+A F+ E + Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDDYQP----TE 60
Query: 97 TPVERRARIHKLRLEKGA--EKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESK 153
+ ++R+ R+ +LEK A E +E K + P DPN+ GD +KTL V+RL Y+ TE
Sbjct: 61 SWLQRKDRV---KLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATEKD 117
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD--------KETNKPRGYAFI 205
++REF +GPI E++R+V D K+ K RGYAF+
Sbjct: 118 LEREFGRFGPI---------------------ERIRIVVDTHQHEKPGKKVKKHRGYAFV 156
Query: 206 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ +DM+A + DG ++ RR+ VDVERGRTV W PRRL
Sbjct: 157 VFEREKDMRAGLENCDGIRIKDRRIKVDVERGRTVKGWLPRRL 199
>gi|225677479|gb|EEH15763.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 386
Score = 122 bits (306), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 53/208 (25%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y PP PE ++ +TG+AQFV + G+ + P E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPPTDRAPEDKEPSNITGVAQFVDELKKYGEEV---PYNATES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++R+AR+ + R K + E +K+Y+P+NDP V GD +KTLFV+RLSY+ E+ ++RE
Sbjct: 62 WLQRKARLKEERKAKLEKLLTEGIKEYNPNNDPQVRGDAFKTLFVSRLSYDVVEADLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F +GPI+R AAY
Sbjct: 122 FGRFGPIER----------------------------------------------SSAAY 135
Query: 218 KQADGRKLDGRRVLVDVERGRTVPNWRP 245
K+ DG ++ RRVLVDVERGRTV W+P
Sbjct: 136 KETDGIRIKDRRVLVDVERGRTVKGWKP 163
>gi|157816921|ref|NP_001101953.1| U1 small nuclear ribonucleoprotein 70 kDa [Rattus norvegicus]
gi|337443|gb|AAA36571.1| ribonucleoprotein antigen [Homo sapiens]
gi|26346286|dbj|BAC36794.1| unnamed protein product [Mus musculus]
gi|29165791|gb|AAH49128.1| Snrnp70 protein [Mus musculus]
gi|119572834|gb|EAW52449.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_d [Homo sapiens]
gi|148690899|gb|EDL22846.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690900|gb|EDL22847.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|148690902|gb|EDL22849.1| U1 small nuclear ribonucleoprotein polypeptide A, isoform CRA_b
[Mus musculus]
gi|149055930|gb|EDM07361.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055932|gb|EDM07363.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|149055935|gb|EDM07366.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_a [Rattus norvegicus]
gi|193788471|dbj|BAG53365.1| unnamed protein product [Homo sapiens]
gi|417396419|gb|JAA45243.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Desmodus rotundus]
Length = 166
Score = 122 bits (305), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 107/186 (57%), Gaps = 33/186 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE YGPIKR + +V K + KPRGYAFIEY H RDM
Sbjct: 120 RREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMH 158
Query: 215 AAYKQA 220
+ + A
Sbjct: 159 STTQLA 164
>gi|149055931|gb|EDM07362.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_b [Rattus norvegicus]
Length = 167
Score = 122 bits (305), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 107/189 (56%), Gaps = 33/189 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 60 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 119
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+REFE YGPIKR + +V K + KPRGYAFIEY H RDM
Sbjct: 120 RREFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEHERDMH 158
Query: 215 AAYKQADGR 223
+ + R
Sbjct: 159 STTQAGRAR 167
>gi|358377877|gb|EHK15560.1| hypothetical protein TRIVIDRAFT_232656 [Trichoderma virens Gv29-8]
Length = 410
Score = 121 bits (304), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 114/212 (53%), Gaps = 24/212 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF R PL + P PEKR+ P+ G+A F+ + + Y P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGLAAFLPELQKYKETDAYQP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E + E K++ P+ DPN+ GD +KTL VARLSYE E ++R
Sbjct: 61 SWLEMRDRKKQEKTEAASNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYEADERDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKA 215
EF +GPI+R+ D+ KP +K KP RGYAF+ + +DM+A
Sbjct: 121 EFGRFGPIERIRIIV----DTHAHEKPNKKK----------KPHRGYAFVVFEREKDMRA 166
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 247
A DG ++ RR+ VDVERGRT NW PRR
Sbjct: 167 ALDACDGIRIKDRRIKVDVERGRTAKNWLPRR 198
>gi|302685085|ref|XP_003032223.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
gi|300105916|gb|EFI97320.1| hypothetical protein SCHCODRAFT_15811 [Schizophyllum commune H4-8]
Length = 399
Score = 121 bits (303), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 90/218 (41%), Positives = 121/218 (55%), Gaps = 33/218 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHF-AEPGDPLYAPPVEKAE 96
L NLLKLF PR PL Y+ P ++ R P + G+ + + E + +E+ E
Sbjct: 7 LPPNLLKLFAPRPPLPYQRPLDRDIDRVRPKNVHGVGEILQRLRVEEASKPHDENMEEGE 66
Query: 97 TPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYETT 150
P A K +R E+ +K E+ ++ Y P +DP GDPYKTLF++RL T
Sbjct: 67 EPNFTLAEEVKRQIRREERKKKKTEDFQRAKDTYKPADDPEAVGDPYKTLFISRLHKNAT 126
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHT 210
ES ++REFESYG I E+VR+V DK+ + RGYAFI Y
Sbjct: 127 ESDLRREFESYGMI---------------------ERVRIVRDKQ-GRSRGYAFIVYERE 164
Query: 211 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RDMK AYK++DG + G+R+LVDVERGRTV W+PRRL
Sbjct: 165 RDMKTAYKESDGLVILGKRILVDVERGRTVRGWKPRRL 202
>gi|56759496|gb|AAW27888.1| SJCHGC02308 protein [Schistosoma japonicum]
Length = 203
Score = 120 bits (302), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/136 (47%), Positives = 84/136 (61%), Gaps = 21/136 (15%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+FVARL+Y+TTESKIKRE +++G I ++ +V + T KP
Sbjct: 1 MFVARLNYDTTESKIKRELDAFGRINNIV---------------------MVKNVITGKP 39
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 259
RGY F+E+ H RDM AA K +GRK+DG RV+ DVERGRT P+WRPRRLG GLG R G
Sbjct: 40 RGYCFVEFEHERDMHAAVKALNGRKIDGARVVTDVERGRTRPDWRPRRLGKGLGKNRQGP 99
Query: 260 EEVNQRYSGREQEPSR 275
+ + R +EPSR
Sbjct: 100 SDKSHRKHENGREPSR 115
>gi|322707331|gb|EFY98910.1| U1 small nuclear ribonucleoprotein [Metarhizium anisopliae ARSEF
23]
Length = 392
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 38/220 (17%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + +PP PEKRK P+ G+A + + + +Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVEPPDYAPEKRKTAPINGVAALLPELQKYKETDVYNP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E + R + E + E K Y P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEAKDRKKHEKKEAVEKLLTEGPKNYAPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN-KP-------RGYAFIEYM 208
EF +GPI E++R++TD + KP RGYAF+ +
Sbjct: 121 EFGRFGPI---------------------ERIRIITDTHAHEKPNKKKKAHRGYAFVVFE 159
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DM+AA DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 160 REKDMRAALDSCDGIRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|310789384|gb|EFQ24917.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 406
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 82/220 (37%), Positives = 114/220 (51%), Gaps = 44/220 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQF---VSHFAEPGDPLYAPPVEK 94
L NLL LF PR PL + PP PE R+ P++G+A+F + ++ E + Y P
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPESRRTLPVSGVAEFLPALQNYKETDE--YKP---- 58
Query: 95 AETPVERRARIHKLRLEKGAEKA-AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
E+ ++ R R KL + E+ E K + PH DPN+ GD +KTL VARLSYE E
Sbjct: 59 TESWLQMRDR-KKLEKQAAVERLKTEGPKNFKPHEDPNIRGDAFKTLIVARLSYEANEQD 117
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKET--------NKPRGYAFI 205
++REF +GPI E++R++TD RGYAF+
Sbjct: 118 LEREFGRFGPI---------------------ERIRIITDTHAHEKPRKKKKPHRGYAFV 156
Query: 206 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
+ +DM+AA DG ++ RR+ VDVERGRTV W P
Sbjct: 157 VFEREKDMRAALDACDGIRIKDRRIKVDVERGRTVKGWVP 196
>gi|443916274|gb|ELU37399.1| U1 snRNP 70K protein [Rhizoctonia solani AG-1 IA]
Length = 250
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/259 (35%), Positives = 124/259 (47%), Gaps = 81/259 (31%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL + P+K + ++G+A ++ E E+
Sbjct: 5 LPPNLLKLFAPRPPLPFVRSVGKDPDKVRSKKVSGVAALLAEIREAN--------ERGIV 56
Query: 98 PVERRARIHKLRLEKGAEKA--AEELKK---------------------YDPHNDPNVSG 134
+ R R E+G EK AEE+K+ Y P +DP +G
Sbjct: 57 EADDRDR------EEGEEKFTYAEEIKRGIYREQRQKRKKEEFQKAKETYKPADDPEATG 110
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK 194
DPYKTLF++RLS TE +++EF +YG I E++RLV +K
Sbjct: 111 DPYKTLFISRLSKNATEDDLRKEFGTYGRI---------------------ERIRLVRNK 149
Query: 195 ETNKPRGYAFIEYMHTRDMK------------------AAYKQADGRKLDGRRVLVDVER 236
RGYAFI Y +DMK AAYK+ADG + G+R+LVDVER
Sbjct: 150 R-GVSRGYAFIVYDREKDMKGILIPCHAPTWKLNSVPTAAYKEADGISILGKRILVDVER 208
Query: 237 GRTVPNWRPRRLGGGLGTT 255
GRTV W+PRRLGGGLG +
Sbjct: 209 GRTVRGWKPRRLGGGLGAS 227
>gi|90076320|dbj|BAE87840.1| unnamed protein product [Macaca fascicularis]
Length = 344
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 100/173 (57%), Gaps = 29/173 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
EFE YGPIKR + +V K + KPRGYAFIEY H
Sbjct: 122 EFEVYGPIKR---------------------IHMVYSKRSGKPRGYAFIEYEH 153
>gi|440639828|gb|ELR09747.1| hypothetical protein GMDG_04233 [Geomyces destructans 20631-21]
Length = 489
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 121/218 (55%), Gaps = 34/218 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPP--VEKA 95
L NLL LF PR L + PP P+ RK ++G+A F+ E Y E
Sbjct: 46 LPPNLLALFAPRPGLRWVPPSDHAPQDRKTATISGLAAFLPALEE-----YKATDKYEPT 100
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKK-----YDPHNDPNVSGDPYKTLFVARLSYETT 150
E+ ++R+ R LRLEK +A E+L K Y P D N+ GD +KTL VARLSY+ T
Sbjct: 101 ESWLQRKDR---LRLEK--REAQEQLLKEGPADYKPQEDQNIRGDAFKTLIVARLSYDAT 155
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHT 210
E ++REF +GPI+R+ + D+ +D KP +K+ K RGYAF+ +
Sbjct: 156 EQDLEREFGRFGPIERIRIVT----DTHQDEKP---------NKKKKKHRGYAFVVFERE 202
Query: 211 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DM+AA DG ++ RR+ VDVERGRTV W+PRR
Sbjct: 203 KDMRAALDGCDGIRIKERRIKVDVERGRTVKGWKPRRF 240
>gi|443704417|gb|ELU01479.1| hypothetical protein CAPTEDRAFT_111454 [Capitella teleta]
Length = 194
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 77/176 (43%), Positives = 109/176 (61%), Gaps = 28/176 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPP----LTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y P +K + G+AQ++S F +P D PP + ET
Sbjct: 5 LPQNLLGLFAPRDPIPYLVPTDKLRSEKKEFRYAGVAQYLSEFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R K RLE+ A K ++L +DP NDP+V+GDP+KTLFVAR++Y+++ESK++RE
Sbjct: 62 KEERKERKKKERLEQVAYKLEQDLALWDPANDPSVTGDPFKTLFVARVNYDSSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
FE++GP++R + LVT+++T KPRGYAFIE+ H RDM
Sbjct: 122 FEAHGPVRR---------------------ISLVTNRKTGKPRGYAFIEFEHERDM 156
>gi|358391969|gb|EHK41373.1| hypothetical protein TRIATDRAFT_176911, partial [Trichoderma
atroviride IMI 206040]
Length = 392
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 81/211 (38%), Positives = 111/211 (52%), Gaps = 22/211 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P PEKR+ P+ G+A F+ + + E E+
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDHAPEKRRTAPIGGVAAFLPELQKYKE---TDKYEPTES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E R R + E E K++ P+ DPN+ GD +KTL VARLSY+ E ++RE
Sbjct: 62 WLEMRDRKKRETQENATNLVTEGPKQFKPNEDPNIRGDAFKTLIVARLSYDAEERDLERE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI+R+ D+ KP +K KP RGYAF+ + +DM+AA
Sbjct: 122 FGRFGPIERIRIIV----DTHAHEKPNKKK----------KPHRGYAFVVFEREKDMRAA 167
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRR 247
DG ++ RR+ VDVERGRT NW PRR
Sbjct: 168 LDACDGIRIKDRRIKVDVERGRTAKNWLPRR 198
>gi|429857182|gb|ELA32061.1| u1 small nuclear ribonucleoprotein [Colletotrichum gloeosporioides
Nara gc5]
Length = 401
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 86/221 (38%), Positives = 115/221 (52%), Gaps = 40/221 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHF-AEPGDPLYAPPVEKAE 96
L NLL LF PR PL + PPP EKRK P++G+A+F+ A Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPPDHAPEKRKTLPVSGVAEFLPALQAYKETDEYKP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKA-AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++ R R KL + EK E K + PH D N+ GD +KTL VARLSYE E ++
Sbjct: 61 SWLQMRDR-KKLEKQAAVEKLKTEGPKNFKPHEDSNIRGDAFKTLIVARLSYEANEQDLE 119
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPR--------GYAFIEY 207
REF +GPI E++R++TD ++ GYAF+ +
Sbjct: 120 REFGRFGPI---------------------ERIRIITDTHAHEKPRKKKKPHRGYAFVVF 158
Query: 208 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DM+AA DG ++ RR+ VDVERGRTV W PRRL
Sbjct: 159 EREKDMRAALDACDGIRIKDRRIKVDVERGRTVKGWVPRRL 199
>gi|402078981|gb|EJT74246.1| hypothetical protein GGTG_08089 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 400
Score = 119 bits (297), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 83/219 (37%), Positives = 111/219 (50%), Gaps = 36/219 (16%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL Y P PP++R+ + G+A F + E D +E+
Sbjct: 5 LPPNLLALFAPRPPLRYIPHIDAPPDQRRATTIDGVAGFKAALQEYKD---KDGYVASES 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
++RR R E+ A E KY P DPN+ GD +KTL VARLSYE E I++E
Sbjct: 62 WLQRRDRKKAEHTEEVARHLKEGPAKYKPLEDPNIRGDAFKTLIVARLSYEADERDIEKE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN-------KP-RGYAFIEYMH 209
F +G I E++R++ D + KP RGYAF+ +
Sbjct: 122 FGRFGTI---------------------ERIRIIKDTHAHEKGNKKRKPHRGYAFVVFER 160
Query: 210 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DM+AA DG ++ RRV VDVERGRTV W+P RL
Sbjct: 161 EKDMRAALDGCDGIRIKDRRVKVDVERGRTVEGWKPLRL 199
>gi|340518330|gb|EGR48571.1| predicted protein [Trichoderma reesei QM6a]
Length = 240
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/211 (37%), Positives = 112/211 (53%), Gaps = 30/211 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF R PL + P PEKR+ P+ G+A F+ + + +Y P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPSDYAPEKRRTAPIGGVAAFLPELQKYKETDVYEP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +E R R + + E E KK+ P+ DPN+ GD +KTL VARLSY+ E ++R
Sbjct: 61 SWLEMRDRKKREKAEAAERLKIEGPKKFKPNEDPNIRGDAFKTLIVARLSYDADERDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
EF +GPI E+VR++T ++ RGYAF+ + +DM+AA
Sbjct: 121 EFGRFGPI---------------------ERVRVMTHRKKKPHRGYAFVVFEREKDMRAA 159
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRR 247
DG ++ RR+ VDVERGRT NW PRR
Sbjct: 160 LDACDGIRIKDRRIKVDVERGRTAKNWLPRR 190
>gi|406866559|gb|EKD19599.1| U1 small nuclear ribonucleoprotein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 408
Score = 118 bits (296), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 114/217 (52%), Gaps = 32/217 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP E RK ++G+A F+ E +K +
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHASEDRKTAYISGLASFLPQLEE---------YKKTDV 55
Query: 98 PVERRARIHKLRLEKGAEKAAEEL------KKYDPHNDPNVSGDPYKTLFVARLSYETTE 151
V + + K K ++AA+E Y P DPN+ GD +KTL VARLSY+ T+
Sbjct: 56 YVPTESWLQKKDRIKAEKRAAQEALTKNGPATYKPDEDPNIRGDAFKTLIVARLSYDATD 115
Query: 152 SKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTR 211
I+REF +GPI+R+ D+ +D KP +K+ RGYAF+ + +
Sbjct: 116 QDIEREFSRFGPIERIRIVV----DTHQDEKP---------NKKKKNHRGYAFVVFEREK 162
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DM+AA + DG ++ RR+ VDV+R +TV W PRRL
Sbjct: 163 DMRAALENCDGIRIKDRRIKVDVQRAKTVRGWLPRRL 199
>gi|219112155|ref|XP_002177829.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410714|gb|EEC50643.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 195
Score = 118 bits (295), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 83/209 (39%), Positives = 118/209 (56%), Gaps = 26/209 (12%)
Query: 50 FEPRAPLEYKPPPEKRKCPPLTGMAQFVSHF-AEPGDPLYAPPVEKAETPVERRARIHKL 108
F P PL + PP + R+ P+TG++ +SHF E + + P + + ERR + +
Sbjct: 11 FMPNPPLLHIPPVQHRRKHPITGVSGLLSHFEKETSERVLQPTPQILK---ERRKALKQE 67
Query: 109 RLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESKIKREFESYGPIKRL 167
+ +K E E +K + G + Y TLF+ RL+YE TE K+ RE ES+GP+K
Sbjct: 68 KHQKELEPLIETYRKEQKESGGEHKGMNCYNTLFIGRLAYEVTERKLLREMESFGPVK-- 125
Query: 168 ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDG 227
+R++ D + K RGYAF+EY H DMK AY+ ADG +++G
Sbjct: 126 -------------------DIRIIKDSKEGKSRGYAFVEYEHEEDMKRAYRAADGIRIEG 166
Query: 228 RRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
R ++VDVERG TVP+W PRRLGGGLG TR
Sbjct: 167 REIVVDVERGHTVPSWLPRRLGGGLGGTR 195
>gi|320582206|gb|EFW96424.1| hypothetical protein HPODL_2081 [Ogataea parapolymorpha DL-1]
Length = 256
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/213 (36%), Positives = 112/213 (52%), Gaps = 38/213 (17%)
Query: 43 TANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEK 94
T ++ LF P+ PL+Y PP EKR+ P + G+AQF+S H E D K
Sbjct: 7 TPLIVDLFTPKVPLQYLPPADVPIEKRRTPKVDGIAQFLSSLKEHVEEYKD-------YK 59
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
E V R A+ KL+ ++ + L K++P D N++GDPYKT+FV RL Y E ++
Sbjct: 60 NEF-VSREAK-AKLKSQQNKDALQRALLKWNPETDTNIAGDPYKTVFVGRLDYTVNEIEL 117
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+ +F +G I +++R+V D T K RGYAFI Y D K
Sbjct: 118 REKFAQFGEI---------------------DQIRVVRDTNTGKSRGYAFILYKSESDAK 156
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 247
A+++ + + R V+VD+ERGR V NW+PRR
Sbjct: 157 LAFQKGNRMVIKDRAVIVDIERGRVVKNWKPRR 189
>gi|427781317|gb|JAA56110.1| Putative u1 small nuclear ribonucleoprotein rrm superfamily
[Rhipicephalus pulchellus]
Length = 201
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 112/198 (56%), Gaps = 28/198 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ Y PP P ++ TG++Q+++ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPYLPPTDKLPHEKTQGTYTGVSQYLNLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + + E+ A K +++ +DP+N+ + + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERKRREKAEQVAYKLEQDIALWDPYNNSSGTLDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE +GPIK K+ +V +K T KPRGYAF+EY H RDM Y
Sbjct: 122 FEVFGPIK---------------------KIVIVHNKITGKPRGYAFVEYEHERDMHCEY 160
Query: 218 KQADGRKLDGRRVLVDVE 235
A L VL+ +E
Sbjct: 161 LWAITPFLICLDVLLFIE 178
>gi|408398954|gb|EKJ78079.1| hypothetical protein FPSE_01540 [Fusarium pseudograminearum CS3096]
Length = 399
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 114/212 (53%), Gaps = 22/212 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P + RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A E Y P D N+ GD +KTL VARLSYE E +++E
Sbjct: 65 RRDRKKREKKEKLENLVTEAPEH---YRPDKDTNIRGDAFKTLIVARLSYEADEKDLEKE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI+R+ + D+ D KP +K KP RGYAF+ + +DM+AA
Sbjct: 122 FGRFGPIERIRVVT----DTHADEKPNKKK----------KPHRGYAFVVFEREKDMRAA 167
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DG ++ RR+ VDVERGRTV WRPRRL
Sbjct: 168 LDSCDGMRIKDRRIKVDVERGRTVKGWRPRRL 199
>gi|361128631|gb|EHL00561.1| putative U1 small nuclear ribonucleoprotein 70 kDa like protein
[Glarea lozoyensis 74030]
Length = 421
Score = 116 bits (291), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 84/213 (39%), Positives = 120/213 (56%), Gaps = 24/213 (11%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPL-YAPPVEKAE 96
L NLL LF PR L + P P +RK P ++G+A F+ E + Y P E
Sbjct: 5 LPPNLLALFAPRPALRWVAPSDHAPAERKTPNISGIAAFLPQLQEYKETDDYKP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEE-LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++R+ R+ K+ ++ EK +E Y P DPN+ GD +KTL VARLSYE TE ++
Sbjct: 61 SWLQRKDRL-KMEKKQHQEKLLKEGPTGYKPSEDPNIRGDAFKTLIVARLSYEATEQDLE 119
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YG I+R+ D+ +D KP +K+ K RGYAF+ + +DM+A
Sbjct: 120 SEFGRYGAIERIRIVV----DTHQDEKP---------NKKKKKHRGYAFVVFEREKDMRA 166
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
A + DG ++ RR+ VDVERGRTV +W+PRR
Sbjct: 167 ALENCDGIRIKDRRIKVDVERGRTVRDWKPRRF 199
>gi|46124653|ref|XP_386880.1| hypothetical protein FG06704.1 [Gibberella zeae PH-1]
Length = 393
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 84/212 (39%), Positives = 114/212 (53%), Gaps = 22/212 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPP----EKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + P + RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEAPDYAPQNRKTAPISGVAQFLPELQKYKETDVYHPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A E Y P D N+ GD +KTL VARLSYE E +++E
Sbjct: 65 RRDRKKREKKEKLESLVTEAPEH---YRPDKDTNIRGDAFKTLIVARLSYEADEKDLEKE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI+R+ + D+ D KP +K KP RGYAF+ + +DM+AA
Sbjct: 122 FGRFGPIERIRVVT----DTHADEKPNKKK----------KPHRGYAFVVFEREKDMRAA 167
Query: 217 YKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
DG ++ RR+ VDVERGRTV WRPRRL
Sbjct: 168 LDSCDGMRIKDRRIKVDVERGRTVKGWRPRRL 199
>gi|118356855|ref|XP_001011681.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila]
gi|89293448|gb|EAR91436.1| U1 small nuclear ribonucleoprotein 70 kDa [Tetrahymena thermophila
SB210]
Length = 302
Score = 116 bits (290), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 105/182 (57%), Gaps = 25/182 (13%)
Query: 72 GMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPN 131
GM ++ E G P+ P+EK ETP E+ R K + EK +K +E++ ++P +D
Sbjct: 130 GMWDYILQKFERGPPV---PLEKFETPEEKMIREKKEKKEKLKQKIRDEMQSWNPFDDQK 186
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLV 191
+ DPYKTL + +SY ESK+K F+ YGPIK SC R++
Sbjct: 187 QTSDPYKTLLIFNISYNVNESKLKEHFKVYGPIK-----SC----------------RII 225
Query: 192 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGG 251
+ + K RGY FIE+ D +AYK A +K+DGRR+ VD+ERGRT+ ++RPRR GGG
Sbjct: 226 RN-QNQKHRGYGFIEFERKNDFISAYKNAHEKKIDGRRIGVDIERGRTILSFRPRRFGGG 284
Query: 252 LG 253
LG
Sbjct: 285 LG 286
>gi|340502463|gb|EGR29151.1| u1 small nuclear ribonucleoprotein 70 kda, putative
[Ichthyophthirius multifiliis]
Length = 464
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 69/169 (40%), Positives = 94/169 (55%), Gaps = 22/169 (13%)
Query: 90 PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYET 149
PP+ K ETP E+ R + + +K + + L +++P D ++ DPYKTL + +SY
Sbjct: 159 PPLAKVETPREKIKREKQEKRQKQKQLIKQNLMEWNPFEDSKITSDPYKTLVLNNISYNA 218
Query: 150 TESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
E KIK F+ YGPIK SC R++ + K RGY IE+
Sbjct: 219 NEQKIKEHFKMYGPIK-----SC----------------RIIRN-LNQKHRGYGIIEFER 256
Query: 210 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
T D AYK A +K+DGRR+ VD+ERGRT+ +RP RLGGGLG TR G
Sbjct: 257 TADFIQAYKNAHEKKIDGRRIGVDIERGRTILRFRPMRLGGGLGITRKG 305
>gi|402224642|gb|EJU04704.1| RNA-binding domain-containing protein, partial [Dacryopinax sp.
DJM-731 SS1]
Length = 389
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 110/219 (50%), Gaps = 44/219 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAE-------------PG 84
L NLLKLF PR PL Y P K K + G+A ++ E G
Sbjct: 5 LPPNLLKLFAPRPPLPYLRAVGRDPNKPKLKNVGGVATLLAQIKEQTIVDTEKDDGREEG 64
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
+ E+ + + R R K +E+ KA + Y P DP+ GDPYKTLF++R
Sbjct: 65 EEEQFTYTEEVKRSIRREER--KKMMEENMTKAKDN---YKPSEDPHAQGDPYKTLFISR 119
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
LS + TE +++EFE YG I E++RLV D + + RGYAF
Sbjct: 120 LSKKVTEKDLQKEFERYGDI---------------------EQIRLVRDPQA-RSRGYAF 157
Query: 205 IEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+ Y RDMKAAYK A+G L G+R+LVDVERGRTV W
Sbjct: 158 VVYERERDMKAAYKDAEGLVLLGKRILVDVERGRTVRGW 196
>gi|400597493|gb|EJP65226.1| U1 small nuclear ribonucleoprotein [Beauveria bassiana ARSEF 2860]
Length = 400
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/213 (38%), Positives = 114/213 (53%), Gaps = 24/213 (11%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + +PP PEKRK P + G+A F+ + + P E
Sbjct: 5 LPPNLLALFAPRPPLRWVQPPDHAPEKRKTPHVDGLAAFLPDLKAYKENDTSIPTESWLE 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ K +E + +A K Y P+ DP + GD +KTL VARLSYE E ++RE
Sbjct: 65 ARDRKKLEKKAAVE---DLSANAPKYYKPNEDPLIRGDAFKTLIVARLSYEADERDLERE 121
Query: 158 FESYGPIKR--LICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
F +GPI+R ++ ++ ++ KP RGYAF+ + +DM+A
Sbjct: 122 FGRFGPIERTRIVVDTHAAEKGNKKKKPH---------------RGYAFVVFEREKDMRA 166
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
A DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 167 ALDACDGIRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|443900131|dbj|GAC77458.1| U1 small nuclear ribonucleoprotein [Pseudozyma antarctica T-34]
Length = 333
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 122/240 (50%), Gaps = 59/240 (24%)
Query: 42 LTANLLKLFEPRAPLEYKPP------PEKRKCP--------------PLTGMAQFVSHF- 80
L +LL+LF R PLEY P P P PLTG+A +
Sbjct: 5 LPPSLLRLFAARPPLEYAAPLVYDPNPNATPLPKDRSLISKRKSIRSPLTGVAATLELVK 64
Query: 81 ------AEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEE------LKKYDPHN 128
E D + ++ + AR+ ++ A+KAA+ L++Y PH+
Sbjct: 65 QEAADRGESTDDI----AHESSSANMTLARVTLAEMDAEAKKAAKAEVKQRGLEEYKPHD 120
Query: 129 DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKV 188
+ + D YKTLF+ARL+Y+ TE + REF+ YGPI E +
Sbjct: 121 NAEATPDAYKTLFLARLAYDVTEKDLHREFDMYGPI---------------------ETI 159
Query: 189 RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
RLV D+E K RGYAFI Y RDM+AA+K A+G K++GRRV+VDVERGRTV +W+P RL
Sbjct: 160 RLVRDRE-GKSRGYAFIAYERERDMRAAWKDAEGIKINGRRVMVDVERGRTVKDWKPTRL 218
>gi|375073667|gb|AFA34392.1| U1 small nuclear ribonucleoprotein 70KDa, partial [Ostrea edulis]
Length = 162
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 30/176 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R P++Y PP K +K P G++ F+ F +P D PP + ET
Sbjct: 12 LPPNLLALFAARDPIQYLPPVAKLGSEKKRVPYQGVSIFLKEFEDPKD---TPPPTRVET 68
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER+ R K R E+ A K ++L +DP N +GDPYKTLFVAR++Y+T+ESK++RE
Sbjct: 69 KDERKERKRKERAEQIAYKLEQDLALWDPSN--AATGDPYKTLFVARINYDTSESKLRRE 126
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
FE YGPI+ K+ L++DK + KPRGYAFIE+ H RDM
Sbjct: 127 FEVYGPIR---------------------KISLLSDKSSGKPRGYAFIEFEHERDM 161
>gi|425780249|gb|EKV18264.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
PHI26]
Length = 408
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 20/179 (11%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+AQF++ D + P E+ V R+ R + E+ ++ AE LK Y P +
Sbjct: 37 ISGVAQFLADAKTFADEV---PYNATESWVHRKLREKTEKKEQLEKQIAEGLKNYKPKEN 93
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P GDP+KTLFV RL+YE E+ ++REF +GPI+R+ +D
Sbjct: 94 PQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISI--------VKD--------- 136
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
V+DK+ RGYAF+ + +DM+AAYK+ + ++ GR +VDVERGRT W+PRRL
Sbjct: 137 TVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPRRL 195
>gi|425767063|gb|EKV05646.1| U1 small nuclear ribonucleoprotein 70 kDa [Penicillium digitatum
Pd1]
Length = 408
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 68/179 (37%), Positives = 102/179 (56%), Gaps = 20/179 (11%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+AQF++ D + P E+ V R+ R + E+ ++ AE LK Y P +
Sbjct: 37 ISGVAQFLADAKTFADEV---PYNATESWVHRKLREKTEKKEQLEKQIAEGLKNYKPKEN 93
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P GDP+KTLFV RL+YE E+ ++REF +GPI+R+ +D
Sbjct: 94 PQARGDPFKTLFVGRLNYEAKEADLEREFGRFGPIERISI--------VKD--------- 136
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
V+DK+ RGYAF+ + +DM+AAYK+ + ++ GR +VDVERGRT W+PRRL
Sbjct: 137 TVSDKKKKPHRGYAFVVFEREKDMRAAYKETESLRIKGRLAVVDVERGRTTKGWKPRRL 195
>gi|392564615|gb|EIW57793.1| RNA-binding domain-containing protein [Trametes versicolor
FP-101664 SS1]
Length = 399
Score = 113 bits (282), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 88/224 (39%), Positives = 116/224 (51%), Gaps = 42/224 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHF--AEPGDPLYAPPVEK- 94
L NLLKLF PR PL Y P ++ R P + G+ ++ A D + + K
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVEGVGHILAQLREARTQDLIDSGNAAKR 66
Query: 95 -------AETPVERRARIHK--LRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLF 141
E P A K +R E+ +K AE+ K Y P DP +GDPYKTLF
Sbjct: 67 EEDAMEEGEEPTFTYAEETKRQIRREERKQKKAEDFAKAKDNYKPAEDPEATGDPYKTLF 126
Query: 142 VARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRG 201
++RL +ES ++REFES+G I E+VR+V DK + RG
Sbjct: 127 ISRLHKNASESDLRREFESFGSI---------------------ERVRIVRDK-NGRSRG 164
Query: 202 YAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
YAFI + RDMKAAYK++D + G+RVLVDVERGRTV W+P
Sbjct: 165 YAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKP 208
>gi|375152292|gb|AFA36604.1| U1 snRNP-interacting 70 kDa protein, partial [Lolium perenne]
Length = 77
Score = 112 bits (281), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 64/73 (87%)
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ET E++ RI +L+LE+GA K AEEL+KYDP NDPNV+GDPYKTLFVARL+YET+E K+
Sbjct: 3 CETRAEKKDRIRQLKLEQGAAKVAEELQKYDPQNDPNVTGDPYKTLFVARLNYETSEQKV 62
Query: 155 KREFESYGPIKRL 167
KR+FE+YGPIKR+
Sbjct: 63 KRDFEAYGPIKRV 75
>gi|255953297|ref|XP_002567401.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589112|emb|CAP95234.1| Pc21g03370 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 394
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 106/182 (58%), Gaps = 26/182 (14%)
Query: 70 LTGMAQFVS---HFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDP 126
L+G+AQF++ FAE P E+ ++R+ R + EK ++ E L+ Y+P
Sbjct: 37 LSGVAQFLTDAKAFAE------EVPYNATESVMQRKLREKAEKKEKLEKQITEGLQNYNP 90
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDE 186
DP V GDP+KT+FV+RLSY+T E+ ++REF +GPI+R+ +D
Sbjct: 91 DKDPQVRGDPFKTIFVSRLSYDTKETDLEREFGRFGPIERI--------SIVKD------ 136
Query: 187 KVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 246
V+DK+ RGY F+ + +DMKAAYK+ + + GR V+VDVERGRT W+PR
Sbjct: 137 ---TVSDKKKKPHRGYGFVVFEREKDMKAAYKETENLSIRGRPVVVDVERGRTTKGWKPR 193
Query: 247 RL 248
RL
Sbjct: 194 RL 195
>gi|366993981|ref|XP_003676755.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
gi|342302622|emb|CCC70398.1| hypothetical protein NCAS_0E03280 [Naumovozyma castellii CBS 4309]
Length = 321
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 119/222 (53%), Gaps = 46/222 (20%)
Query: 42 LTANLLKLFEPRAPLEY-----KPPPEKRKCPPLTGMAQFVSHFAE------PGDPLYAP 90
L +++ LF+P PL Y PP +++ P +TG++QF+S+ + P D
Sbjct: 8 LPSDISHLFKPGPPLRYFKSTDYPPSKRQTNPNITGVSQFLSNNLQSYLNDFPSD----- 62
Query: 91 PVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYET 149
++T V+ + ++ E+ K E ++ +DPHNDPN+ DPY+T+F+ RL Y+T
Sbjct: 63 ----SQTKVDEDKQFEEVEKER-ISKMNESIRNWDPHNDPNIKDTDPYRTIFIGRLPYDT 117
Query: 150 TESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
TE ++++ F +G I EK+R+V DK TNK +GYAFI ++
Sbjct: 118 TELELQKLFVKFGEI---------------------EKIRIVRDKLTNKSKGYAFIVFLD 156
Query: 210 TRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
K A+K+ G + GR +VD+ER RT+ ++PRRL
Sbjct: 157 PMSSKMAFKEIGVHRGIDIKGRTCIVDIERSRTMKYFKPRRL 198
>gi|149605642|ref|XP_001519834.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ornithorhynchus anatinus]
Length = 275
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 88/232 (37%), Positives = 117/232 (50%), Gaps = 32/232 (13%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP+ TLFV RL+ +TTE K+K F YG I+
Sbjct: 36 LARYIPNK--GVTGDPHLTLFVGRLNLQTTEEKLKETFSRYGDIR--------------- 78
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
K+RLV D T +GYAFIEY R + AY+ A+G +D + VD E RT+
Sbjct: 79 ------KLRLVRDLVTGFSKGYAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ RER +
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PALKNDFYGEGQRERG-D 185
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRER-ERDRGRERD 351
RG DR R R+RDH R R ++R R E DR RERD
Sbjct: 186 RG-DRGERSRSRERTWDWRSRERDHERGREKRWQEREPPRTWGESDRQRERD 236
>gi|169625439|ref|XP_001806123.1| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
gi|160705655|gb|EAT76571.2| hypothetical protein SNOG_15992 [Phaeosphaeria nodorum SN15]
Length = 386
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 107/208 (51%), Gaps = 31/208 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L LL LF PR PL + P PEKR P ++G+ Q++ E D Y P +
Sbjct: 5 LPPMLLNLFAPRPPLRWVEPSDHAPEKRCTPKISGIGQYLQAMKEYKDNDGYVP----TD 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ +++R R + EK + +E + +Y P DP V GD +KTLFV+RL+Y T ++R
Sbjct: 61 SWLQKRDRKKLEKKEKQEKLLSEGIHQYKPSEDPKVQGDAFKTLFVSRLAYGVTSDDLER 120
Query: 157 EFESYGPIKRL-ICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF YGPI+R+ I + D P K RGYAFI Y +
Sbjct: 121 EFGRYGPIERIRIVEDIT---APPDAPPKKRK------------RGYAFIVY------EP 159
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNW 243
YK+ DG K+ RRVLVDVERGRTV W
Sbjct: 160 PYKETDGIKIKDRRVLVDVERGRTVSGW 187
>gi|254580049|ref|XP_002496010.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
gi|238938901|emb|CAR27077.1| ZYRO0C08382p [Zygosaccharomyces rouxii]
Length = 304
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/221 (34%), Positives = 119/221 (53%), Gaps = 49/221 (22%)
Query: 42 LTANLLKLFEPRAPLEYK-P---PPEKRK-CPPLTGMAQ--------FVSHFAEPGDPLY 88
+++ +LF+PR PLEYK P PPEKR+ CP +TG++Q +V+ F + D Y
Sbjct: 8 FPSDVSRLFKPRPPLEYKRPVDYPPEKRQTCPHITGVSQLLGEQLSSYVNQFPQGSDNKY 67
Query: 89 APPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSY 147
E+A H E K +E + ++PH DPN+ DP+KT+FV RL Y
Sbjct: 68 LQKYEEAS---------HAKDNEYA--KLNQETRGWEPHKDPNIKETDPFKTIFVGRLPY 116
Query: 148 ETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEY 207
+TTE +++REF +G I E++R+V DK TNK +GYAF+ +
Sbjct: 117 DTTEMELQREFSKFGDI---------------------ERIRVVRDKVTNKSKGYAFVLF 155
Query: 208 MHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 245
+ + + A K+ G ++ GR +VD+ERGRT+ ++P
Sbjct: 156 TNPQSSRMACKEIGIHRGLEIKGRIAIVDIERGRTIKYFKP 196
>gi|342885914|gb|EGU85866.1| hypothetical protein FOXB_03714 [Fusarium oxysporum Fo5176]
Length = 391
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 115/219 (52%), Gaps = 36/219 (16%)
Query: 42 LTANLLKLFEPRAPLEYK-PP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + PP P+ R+ P+TG+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRFLDPPDYAPQHRRTAPITGVAQFLPELQKYKETDVYNPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ R K +LE +A + K P+ DPNV GD +KTL VARLSY+ E +++E
Sbjct: 65 ARDRKKREKKEKLETLLREAPDHHK---PNEDPNVRGDAFKTLMVARLSYDADERDLEKE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN-------KP-RGYAFIEYMH 209
F YGPI E++R+V D + KP RGYAF+ +
Sbjct: 122 FGRYGPI---------------------ERIRIVVDTHAHEKPNKKKKPHRGYAFVVFER 160
Query: 210 TRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+DM+AA DG ++ RR+ VDVERGRTV W+PRRL
Sbjct: 161 EKDMRAALDACDGMRIKDRRIKVDVERGRTVKGWKPRRL 199
>gi|67482015|ref|XP_656357.1| U1 small nuclear ribonucleoprotein subunit [Entamoeba histolytica
HM-1:IMSS]
gi|56473555|gb|EAL50974.1| U1 small nuclear ribonucleoprotein subunit, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 509
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 116/218 (53%), Gaps = 31/218 (14%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAE--PGDPLYAPPVEKAETPV 99
L N LF P P+ + PP EK P +G++ +++ F E P + ++ + P
Sbjct: 5 LPKNFAALFVPDEPIRFLPPVEKHWFPNYSGVSSYLTMFDELTPNNEKKTEEID-SFAPT 63
Query: 100 ERRARIHKLRLEKGAEKAAEELKK----YDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
++ + +LR K E+ A+ L+ +DP ++ + +P +T+ V RL +T ES ++
Sbjct: 64 WTKSGLRELRFLKTKEEKAQSLRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDESILQ 123
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-KETNKPRGYAFIEYMHTRDMK 214
R F YG IK+++ ++ D K NK GYAF+EY H + +
Sbjct: 124 RLFSEYGEIKKIV---------------------IIKDLKGINK--GYAFVEYNHRSEAE 160
Query: 215 AAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 252
A ++A+G +++ + ++V++E+GRT +++P+RLGG +
Sbjct: 161 RACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTI 198
>gi|326929594|ref|XP_003210944.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Meleagris gallopavo]
Length = 265
Score = 109 bits (273), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 89/240 (37%), Positives = 117/240 (48%), Gaps = 50/240 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIR--------------- 78
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
K+RLV D T +GYAFIEY R + A++ A+ +D V VD E RT+
Sbjct: 79 ------KIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVVDQHEVFVDFELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER--- 297
W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ E+
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PNVKNDFYGEGSAEKRNW 186
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR-----DRERERDRGRERDR 352
SRE RD R RDR+H R R +R R D ERERD ER R
Sbjct: 187 SREGARDW-------------RTRDREHERSREKRGPERERSWGWADSERERDSKEERSR 233
>gi|357508099|ref|XP_003624338.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
gi|355499353|gb|AES80556.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Medicago
truncatula]
Length = 566
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 81/162 (50%), Gaps = 25/162 (15%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGG 175
+ + YDP DP +GDPY TLFV RLS TTE +++ +G +K L
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVGRLSRLTTEETLRKVMSEFGQVKNL-------- 92
Query: 176 DSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 235
RLV D T RGYAF+E+ R+M+ AY A +D ++VD
Sbjct: 93 -------------RLVRDIVTGASRGYAFVEFETEREMRRAYMDAHHLIVDDCEIIVDYN 139
Query: 236 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
R + +P W PRRLGGGL + G+ R+ GRE+ P R P
Sbjct: 140 RQQLMPGWIPRRLGGGLSGNKESGQ---LRFGGREK-PFRAP 177
>gi|449279308|gb|EMC86943.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Columba
livia]
Length = 254
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 92/248 (37%), Positives = 123/248 (49%), Gaps = 52/248 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEAFSRYGDIR--------------- 78
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
K+RLV D T +GYAFIEY R + A++ A+ +D + VD E RT+
Sbjct: 79 ------KIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER--- 297
W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ E+
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PNMKNDFYGEGSAEKRNW 186
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR-DRERERDRG-RERDRDRT 355
SRE RD R RDRD H R RD R +RER G ER+RD
Sbjct: 187 SREGTRDW-------------RTRDRD-----HERSRDNRRPERERSWAWGESERERDSK 228
Query: 356 RDRDRGRD 363
+R RGR+
Sbjct: 229 EERSRGRE 236
>gi|356567272|ref|XP_003551845.1| PREDICTED: uncharacterized protein LOC100814109 [Glycine max]
Length = 347
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 63/162 (38%), Positives = 82/162 (50%), Gaps = 25/162 (15%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGG 175
+ + YDP DP +GDPY TLFVARLS TTE +++ YG +K L
Sbjct: 41 QLCSSIGLYDPFGDPKATGDPYCTLFVARLSRLTTEDDLRKVMSKYGRVKNL-------- 92
Query: 176 DSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 235
RLV D T RGYAF+EY R+M+ AY A +D ++VD
Sbjct: 93 -------------RLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYN 139
Query: 236 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
R + +P W PRRLGGGL + G+ R+ GRE+ P R P
Sbjct: 140 RQQLMPGWIPRRLGGGLSGKKESGQ---LRFGGREK-PFRAP 177
>gi|389632567|ref|XP_003713936.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|351646269|gb|EHA54129.1| hypothetical protein MGG_15607 [Magnaporthe oryzae 70-15]
gi|440473215|gb|ELQ42030.1| hypothetical protein OOU_Y34scaffold00240g37 [Magnaporthe oryzae
Y34]
gi|440480244|gb|ELQ60919.1| hypothetical protein OOW_P131scaffold01214g36 [Magnaporthe oryzae
P131]
Length = 405
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 84/218 (38%), Positives = 113/218 (51%), Gaps = 40/218 (18%)
Query: 42 LTANLLKLFEPRAPLEYK----PPPEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL Y P +RK +TG+AQ+ + D Y P E
Sbjct: 5 LPPNLLALFAPRPPLRYLPPSDAPAHERKTATITGLAQYKQALEDYKDKDNYVP----TE 60
Query: 97 TPVERRARIHKLRLEK-GAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
+ ++RR R KL EK A K E KY P +DPN+ GD +KTL VARLSY+ E ++
Sbjct: 61 SWLQRRDR-KKLEHEKEIALKLKEGPAKYKPQDDPNIRGDAFKTLIVARLSYDANEQDLE 119
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN-------KP-RGYAFIEY 207
REF +G I E++R++ D + KP RGYAF+ +
Sbjct: 120 REFGRFGTI---------------------ERIRIIKDTHAHEKGNKKRKPHRGYAFVVF 158
Query: 208 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
+DM+AA + DG ++ RR+ VDVERGRTV W+P
Sbjct: 159 EREKDMRAALEGCDGIRIKDRRIKVDVERGRTVEGWKP 196
>gi|452845346|gb|EME47279.1| hypothetical protein DOTSEDRAFT_69274 [Dothistroma septosporum
NZE10]
Length = 353
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 110/216 (50%), Gaps = 41/216 (18%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHF-----AEPGDPLYAPPV 92
L NLL LF+ R PL + P P E+R+ + G+A F+ F AE D + +
Sbjct: 5 LPPNLLALFQSRPPLRFLPHHDYPQEERRTHQIDGLAAFLPAFKEKVEAEKDDVVTYSVM 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
+K E + K +E G ++ Y P+ D N+ GD +KTLFV+R+SY+T+
Sbjct: 65 QKKENDKLEKQEKQKYLMEHGHQEL------YKPNEDANIRGDAFKTLFVSRMSYDTSTK 118
Query: 153 KIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKPRGYAFIEY 207
+++EF +GPI E+VR+V D K+ K RGY F+ +
Sbjct: 119 DLEKEFGRFGPI---------------------ERVRIVQDRGEKSKKKGKSRGYGFVLF 157
Query: 208 MHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+DMK AYK + + GRRVLVDVERGRTV W
Sbjct: 158 EKEKDMKTAYKDCENLTIRGRRVLVDVERGRTVNGW 193
>gi|301112318|ref|XP_002905238.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
gi|262095568|gb|EEY53620.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, putative
[Phytophthora infestans T30-4]
Length = 204
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 33/169 (19%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
FAE DP+ ++ +T +KG +A ++D DP + GDPY T
Sbjct: 40 FAEEYDPVQIGSIDGTDTTPH----------DKGLVRAMNA--RFDATKDPQIHGDPYAT 87
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
LFVARLS+ T ES I + F +YGPI+RL RLV DK+T++
Sbjct: 88 LFVARLSFSTAESTILQFFSNYGPIRRL---------------------RLVRDKKTDQS 126
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+GYAF+E+ H RD AY+ A R +DG +LVD ER R + W+PRRL
Sbjct: 127 KGYAFVEFEHERDFGRAYRHAHRRVIDGATLLVDFERSRVMKGWKPRRL 175
>gi|331249519|ref|XP_003337376.1| hypothetical protein PGTG_18970 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 545
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 57/122 (46%), Positives = 71/122 (58%), Gaps = 33/122 (27%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DPN +GDPY+TLF++RLSYE TES +KREF+ YGPI +L+
Sbjct: 213 YDPKQDPNATGDPYRTLFISRLSYEVTESDLKREFDMYGPIDKLV--------------- 257
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+V +K T K G AAYK A+G K+ GRR+LVDVERGRTV W
Sbjct: 258 ------IVKNKLTGKSPGM------------AAYKDAEGLKIKGRRILVDVERGRTVKGW 299
Query: 244 RP 245
+P
Sbjct: 300 KP 301
>gi|157140206|ref|XP_001647625.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108866540|gb|EAT32293.1| AAEL015585-PA [Aedes aegypti]
Length = 176
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/180 (41%), Positives = 100/180 (55%), Gaps = 28/180 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
FE+YG I ++I ++ DKET KPRGYAFIEY H RDM Y
Sbjct: 122 FETYGKIVKII---------------------IIHDKETGKPRGYAFIEYEHERDMHCKY 160
>gi|50552784|ref|XP_503802.1| YALI0E10989p [Yarrowia lipolytica]
gi|49649671|emb|CAG79393.1| YALI0E10989p [Yarrowia lipolytica CLIB122]
Length = 345
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/213 (32%), Positives = 114/213 (53%), Gaps = 34/213 (15%)
Query: 42 LTANLLKLF----EPRA--PLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKA 95
L ++ +LF EPR P++Y P E R+ ++G++ ++ +P D Y P
Sbjct: 24 LPPHIQRLFPECPEPRYLEPIDYAP--EDRRTQKISGVSAYMELLKQP-DSEYVP----T 76
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
E+ + ++ R +L+ E+ E + +DP D + GDP+KTLFVARL+++ TE+ ++
Sbjct: 77 ESWLVKQQREKRLKSERQKVTQQERKEAWDPKKDDKIVGDPFKTLFVARLAFDVTENDLE 136
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
+ +GP+K VR+V D ++ K GY F+E+ D +
Sbjct: 137 EHYIKFGPVKH---------------------VRIVRDLKSGKSNGYGFVEFQEEDDFRK 175
Query: 216 AYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
A++ +G + GR+V+VDVERGRTV W PRRL
Sbjct: 176 AFQMTNGSIIKGRKVVVDVERGRTVSGWLPRRL 208
>gi|395529739|ref|XP_003766966.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Sarcophilus harrisii]
Length = 283
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 96/272 (35%), Positives = 142/272 (52%), Gaps = 40/272 (14%)
Query: 130 PN--VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEK 187
PN VSGDPY TLFV RL+ +TTE K+K F YG I++L
Sbjct: 41 PNKGVSGDPYLTLFVGRLNLQTTEEKLKDVFSRYGDIRKL-------------------- 80
Query: 188 VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRR 247
RLV D T + YAFIEY + + AY+ A+G +D + VD E R + W PRR
Sbjct: 81 -RLVRDVVTGFSKRYAFIEYREEQSLLKAYRDANGLVIDQHEIFVDYELERVLKGWIPRR 139
Query: 248 LGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRER 307
LGGG G + G+ R+ GR++ P R P P + D +G+ RER RE RDR
Sbjct: 140 LGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PVFKSDFYGEGQRER-REWCRDRSW 192
Query: 308 EREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERD-------RGRERDRDRTRDRDR 360
+ ++ + HDR R++ ++ D+ +R+RERD +DR+R +DR+R
Sbjct: 193 D-WRARDQDHDRGREKRWQERESSSAWDKN-ERQRERDFREERSRGRERKDRER-KDRER 249
Query: 361 GRDRGRDHERDREKDRDKERDRDRTRERERDR 392
+D ER ++ RD+ ++RD ++R+ D+
Sbjct: 250 KDRERKDRERKDQERRDRSKERDSKKQRKDDK 281
>gi|336383939|gb|EGO25088.1| U1 snRNP 70K protein [Serpula lacrymans var. lacrymans S7.9]
Length = 377
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 40/223 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL Y P K + G+ ++ E
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGDGME 66
Query: 90 ----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARL 145
P AE + R + R + K A+E Y P +DP GDPYKTLF++RL
Sbjct: 67 EGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKE--TYKPSDDPEAIGDPYKTLFISRL 124
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
+E +++R+FES+G I E+VR+V D + + RGYAFI
Sbjct: 125 HKGASEMELRRDFESFGTI---------------------ERVRIVRDSK-GRSRGYAFI 162
Query: 206 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
Y RDMKAAYK++DG ++G+R+LVDVERGRTV W+PRRL
Sbjct: 163 VYERERDMKAAYKESDGLHINGKRILVDVERGRTVRGWKPRRL 205
>gi|156040914|ref|XP_001587443.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980]
gi|154695819|gb|EDN95557.1| hypothetical protein SS1G_11435 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 456
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 43/230 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDP-LYAPPVEKAE 96
L NLL LF PR PL + PP PE RK P ++G+A ++ E + Y P E
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDHAPENRKTPAVSGLAAYLPALKEYKETDQYTP----TE 60
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ ++R+ R+ + + + E K + P DPN+ GD +KTL V+RL YE TE ++R
Sbjct: 61 SWLQRKDRVTQEKKAAHEKIIQEAPKTFKPSEDPNIRGDAFKTLIVSRLDYEATEKDLER 120
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA- 215
EF +GPI+R+ D+ + KP K+ K RGYAF+ + +DM+
Sbjct: 121 EFGRFGPIERIRIVV----DTHQHEKPG---------KKVKKHRGYAFVVFEREKDMRGK 167
Query: 216 -------AYKQADGRKL-------------DGRRVLVDVERGRTVPNWRP 245
Y +L RR+ VDVERGRTV W P
Sbjct: 168 AEHTLYPPYTNGIVAQLAHRFGVSTFLSLIKDRRIKVDVERGRTVKGWLP 217
>gi|358054541|dbj|GAA99467.1| hypothetical protein E5Q_06166 [Mixia osmundae IAM 14324]
Length = 375
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 113/225 (50%), Gaps = 44/225 (19%)
Query: 42 LTANLLKLFEPRAPLEYKPP-------PEKRKCPPLTGMAQFV-SHFAEPGDPLYAPPVE 93
L NLLKLF PR + Y P P + P + + + V AE G+ +E
Sbjct: 5 LPPNLLKLFAPRPAIPYAKPLGRDIDRPLNKAIPGVFDVIERVRQERAERGEEA----LE 60
Query: 94 KAETPVERRARIHK--LRLEKG--------AEKAAEELKKYDPHNDPNVSGDPYKTLFVA 143
E + A L++ G E + L+ Y P D + GDPY+T+F++
Sbjct: 61 AEERSLNPEAFTDSADLKIANGRAERKRRKEETYKKALETYKPKEDEHAVGDPYRTIFIS 120
Query: 144 RLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYA 203
RL + TE ++++EF+ YG I E ++++ D + K RGYA
Sbjct: 121 RLHRDATEEQLRKEFDLYGRI---------------------ENLKIIRDSK-EKSRGYA 158
Query: 204 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
FI Y RDMKAAYK ADG K+ G+R+LVDVERGRTV W+PRRL
Sbjct: 159 FILYERERDMKAAYKDADGLKILGKRILVDVERGRTVKGWKPRRL 203
>gi|353241024|emb|CCA72864.1| related to SNP1-U1 small nuclear ribonucleoprotein [Piriformospora
indica DSM 11827]
Length = 362
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 82/228 (35%), Positives = 111/228 (48%), Gaps = 46/228 (20%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P P + +TG+A ++ E A +++
Sbjct: 5 LPPNLLKLFAPRPPLPYARPIDKDPNVVRPKTVTGVAALLAAIREENT---AGLIDQGRA 61
Query: 98 PVERRARI---HKLRLEKGAEKAA--------------EELKKYDPHNDPNVSGDPYKTL 140
E A K L + + + Y P ++P+ GDPYKTL
Sbjct: 62 EDEAGAVTEEDSKFTLAEETRREIRREEKKKKKVEDFKNAVNNYRPVDNPDAQGDPYKTL 121
Query: 141 FVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPR 200
FVARL + TE+ ++REFE +G I R +++V +K N R
Sbjct: 122 FVARLPKKATENDLRREFEMFGVIAR---------------------IKIVKNKNGNS-R 159
Query: 201 GYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
GYAFI Y RDMK AYK+ + +L G+R+LVDVERGRTV W+PRRL
Sbjct: 160 GYAFIVYERERDMKVAYKEGEHMQLLGKRILVDVERGRTVRGWKPRRL 207
>gi|403418000|emb|CCM04700.1| predicted protein [Fibroporia radiculosa]
Length = 372
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 113/232 (48%), Gaps = 57/232 (24%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P ++ + + G+AQ ++ E +K +
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRKKHVNGVAQLLARLRE----------DKTQG 56
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK---------------------YDPHNDPNVSGDP 136
+E E+ A AEE K+ Y P +D GDP
Sbjct: 57 MIESGGSEGMEEGEEPAFTYAEETKRAIRRDERKAKKTEEFKIAKEIYKPADDAEAVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKET 196
+KTLF+ARL T+S ++REFE +G I E+VR+V DK
Sbjct: 117 FKTLFIARLHKSATDSDLRREFEGFGSI---------------------ERVRIVRDKR- 154
Query: 197 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ RGYAFI + RDMKAAYK++D + G+RVLVDVERGRTV W+PRRL
Sbjct: 155 GRSRGYAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKPRRL 206
>gi|336370661|gb|EGN99001.1| hypothetical protein SERLA73DRAFT_168572 [Serpula lacrymans var.
lacrymans S7.3]
Length = 379
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 40/223 (17%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL Y P K + G+ ++ E
Sbjct: 7 LPPNLLKLFAPRPPLPYARPVGKDIDRITNKNVDGVGSILAQLKEASTAGLLNGEGDGME 66
Query: 90 ----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARL 145
P AE + R + R + K A+E Y P +DP GDPYKTLF++RL
Sbjct: 67 EGEEPAFTHAEETKRQIRREERKRRKVEEFKIAKE--TYKPSDDPEAIGDPYKTLFISRL 124
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
+E +++R+FES+G I E+VR+V D + + RGYAFI
Sbjct: 125 HKGASEMELRRDFESFGTI---------------------ERVRIVRDSK-GRSRGYAFI 162
Query: 206 EYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
Y RDMKAAYK++DG ++G+R+LVDVERGRTV W+PRRL
Sbjct: 163 VYERERDMKAAYKESDGLHINGKRILVDVERGRTVRGWKPRRL 205
>gi|327276115|ref|XP_003222816.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Anolis carolinensis]
Length = 260
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 110/218 (50%), Gaps = 41/218 (18%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ VSGDP+ TLFVARL+ +TTE K+K F YG I+
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVARLNLQTTEDKLKEVFSRYGDIR--------------- 78
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
K+RLV D T +GYAF+EY R + A++ A+ +D R + VD E RT+
Sbjct: 79 ------KIRLVRDLVTGFSKGYAFVEYKEERALIKAHRDANRLVIDQREIFVDFELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ ER
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PAMKSDFYGEGPMER--- 183
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR 338
RDR R+ + RDRDH +R R +R R
Sbjct: 184 --RDRVWSRD-------GKTRDRDHDRNREQRRSERDR 212
>gi|325180074|emb|CCA14475.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein putative
[Albugo laibachii Nc14]
Length = 224
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/154 (40%), Positives = 80/154 (51%), Gaps = 25/154 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+DP D N+ GD KTLF+ RL ET++ I + F SYGPI
Sbjct: 86 FDPKRDSNIKGDATKTLFIGRLHSETSQDAIYQLFSSYGPI------------------- 126
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
VRLV D T +GYAF+EY R + A + + R LDGR++LVD ER R +P W
Sbjct: 127 --AHVRLVRDIVTKASKGYAFVEYRDRRHFERALEDGNDRILDGRKLLVDYERSRLMPGW 184
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
+PRR+GGGLG G +E Q G P + P
Sbjct: 185 KPRRMGGGLG----GKKESGQLRFGGVSHPFKRP 214
>gi|395513787|ref|XP_003761104.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Sarcophilus harrisii]
Length = 263
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 81/220 (36%), Positives = 109/220 (49%), Gaps = 39/220 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ VSGDP+ TLFV RL+ +TTE K+K F YG I++L
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T + YAFIEY R + AY+ A+G +D + VD E R +
Sbjct: 81 --------RLVRDVVTGFSKRYAFIEYREERSLLKAYRDANGLVIDQHEIFVDYELERIL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGG G + G+ R+ GR++ P R P P + D +G+ RER
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PVFKSDFYGEGQRER--- 183
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDR 340
RE R++S + R RDRDH R R ++R R
Sbjct: 184 ----REWSRDRSWDW---RTRDRDHDRGREKRRQERESSR 216
>gi|157129095|ref|XP_001661605.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872353|gb|EAT36578.1| AAEL011340-PA [Aedes aegypti]
Length = 186
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/186 (40%), Positives = 103/186 (55%), Gaps = 29/186 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA- 216
FE+YG I ++I ++ DKET KPRGYAFIEY H RDM
Sbjct: 122 FETYGKIVKII---------------------IIHDKETGKPRGYAFIEYEHERDMHWLN 160
Query: 217 YKQADG 222
K A+G
Sbjct: 161 LKWAEG 166
>gi|405117502|gb|AFR92277.1| U1 snRNP 70K protein [Cryptococcus neoformans var. grubii H99]
Length = 435
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPI------------------- 179
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E++R+V +++ K GYAFI Y RDMKAAYK A+G + +++LVDVERGRTV W
Sbjct: 180 --ERIRIVRNRK-GKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGW 236
Query: 244 RPRRL 248
+P+RL
Sbjct: 237 KPQRL 241
>gi|300121567|emb|CBK22085.2| unnamed protein product [Blastocystis hominis]
Length = 390
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 73/226 (32%), Positives = 104/226 (46%), Gaps = 52/226 (23%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+D D + +PYKTLFV RL Y+TTE + + F YG +
Sbjct: 45 FDSTKDRMICCNPYKTLFVGRLKYDTTEEALYQFFSRYGKL------------------- 85
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+ V L+ D T RGY F+E++H D +A+ A LDG ++LVD R +TVP W
Sbjct: 86 --QSVHLIRDLVTGCSRGYGFVEFVHEEDFTSAFYGAHRTILDGSQILVDFMRAQTVPGW 143
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGRE-------------QEPSRGPSRSAEPRIREDRH 290
PRRLGGG+G + G+ R+ GR+ ++P+ G + +P DR
Sbjct: 144 VPRRLGGGVGGKKQSGQ---MRFGGRDCPFHAPYESNRFIKKPNSGDASGGKP---SDRR 197
Query: 291 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR 336
G +E GR ++ REK E D R+H DR R
Sbjct: 198 GSGKEFDEKEDGRYEDKRREKREE------------DGRYHDDRSR 231
>gi|356524599|ref|XP_003530916.1| PREDICTED: uncharacterized protein LOC100807978 [Glycine max]
Length = 358
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 116 KAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGG 175
+ + YDP DP +GDPY TLFVARLS T E +++ YG +K
Sbjct: 41 QLCSSIGLYDPFGDPRAAGDPYCTLFVARLSRLTNEDNLRKVMSKYGRVKNF-------- 92
Query: 176 DSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVE 235
RLV D T RGYAF+EY R+M+ AY A +D ++VD
Sbjct: 93 -------------RLVRDIVTGASRGYAFVEYETEREMRRAYMDAHHLIVDDSEIIVDYN 139
Query: 236 RGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
R + +P W PRRLGGGL + G+ R+ G+E+ P R P
Sbjct: 140 RQQLMPGWIPRRLGGGLSGKKESGQ---LRFGGKEK-PFRAP 177
>gi|50756329|ref|XP_415114.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Gallus gallus]
Length = 263
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 118/232 (50%), Gaps = 40/232 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+
Sbjct: 36 LARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIR--------------- 78
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
K+RLV D T +GYAFIEY R + A++ A+ +D V VD E RT+
Sbjct: 79 ------KIRLVRDLVTGFSKGYAFIEYKEERALLKAHRDANRLVIDQHEVFVDFELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER--- 297
W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ E+
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PNVKNDFYGEGSAEKRNW 186
Query: 298 SRERGRD-REREREKSLELSHDRPRD-RDHRDDRHHRDRDRTRDRERERDRG 347
SRE RD R R+RE H+R R+ R +R D RD + ER RG
Sbjct: 187 SREGTRDWRTRDRE------HERSREKRGPERERSWGWGDSERDSKEERSRG 232
>gi|58258329|ref|XP_566577.1| U1 snRNP 70K protein (short form) [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222714|gb|AAW40758.1| U1 snRNP 70K protein (short form), putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 429
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPI------------------- 179
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E++R+V +++ K GYAFI Y RDMKAAYK A+G + +++LVDVERGRTV W
Sbjct: 180 --ERIRIVRNRK-GKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGW 236
Query: 244 RPRRL 248
+P+RL
Sbjct: 237 KPQRL 241
>gi|134106223|ref|XP_778122.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260825|gb|EAL23475.1| hypothetical protein CNBA1240 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 429
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPI------------------- 179
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E++R+V +++ K GYAFI Y RDMKAAYK A+G + +++LVDVERGRTV W
Sbjct: 180 --ERIRIVRNRK-GKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGW 236
Query: 244 RPRRL 248
+P+RL
Sbjct: 237 KPQRL 241
>gi|157129097|ref|XP_001661606.1| U1 small nuclear ribonucleoprotein 70 kd [Aedes aegypti]
gi|108872354|gb|EAT36579.1| AAEL011340-PB [Aedes aegypti]
Length = 189
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 73/176 (41%), Positives = 99/176 (56%), Gaps = 28/176 (15%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR P+ + PPP+K +K G+ F+ F +P D PP + ET
Sbjct: 5 LPPNLLALFAPRDPIPFLPPPDKLPHEKKSQGYAGVGAFLDLFEDPKD---TPPPTRVET 61
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
ER R + R E+ A K E+ +DP+ + DP+KTLFVAR++Y+T+ESK++RE
Sbjct: 62 REERIERRRRERAEQVAYKLEREIATWDPNQLAEATQDPFKTLFVARINYDTSESKLRRE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
FE+YG I ++I ++ DKET KPRGYAFIEY H RDM
Sbjct: 122 FETYGKIVKII---------------------IIHDKETGKPRGYAFIEYEHERDM 156
>gi|409048430|gb|EKM57908.1| hypothetical protein PHACADRAFT_251839 [Phanerochaete carnosa
HHB-10118-sp]
Length = 386
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 86/232 (37%), Positives = 110/232 (47%), Gaps = 57/232 (24%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK---RKCPP-LTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLLKLF PR PL Y P ++ R P + G Q ++ E EK +
Sbjct: 7 LPPNLLKLFAPRPPLPYTRPLDRDIDRVRPKNVDGAGQLLARLRE----------EKTQG 56
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK---------------------YDPHNDPNVSGDP 136
+ E+ AEE K+ Y P +DP GDP
Sbjct: 57 MMNSGEGEGMEEGEEPNFTHAEETKRQMRREERKKKKTEEFRIAKESYKPADDPEAVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKET 196
YKTLF+ARL TE ++REFE +G I E+VR+V DK
Sbjct: 117 YKTLFIARLHKSATEGDLRREFEGFGSI---------------------ERVRIVRDK-N 154
Query: 197 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ +GYAFI + RDMKAAYK++D + G+RVLVDVERGRTV W+PRRL
Sbjct: 155 GRSQGYAFIVFERERDMKAAYKESDRLHIMGKRVLVDVERGRTVRGWKPRRL 206
>gi|321251142|ref|XP_003191972.1| U1 snRNP 70K protein (short form) [Cryptococcus gattii WM276]
gi|317458440|gb|ADV20185.1| U1 snRNP 70K protein (short form), putative [Cryptococcus gattii
WM276]
Length = 435
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 77/125 (61%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P +D GDPYKTLF++RLS + E+ ++REFE YGPI
Sbjct: 139 YKPQDDAQAIGDPYKTLFISRLSKKANETDLRREFEMYGPI------------------- 179
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E++R+V +++ K GYAFI Y RDMKAAYK A+G + +++LVDVERGRTV W
Sbjct: 180 --ERIRIVRNRK-GKSNGYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGW 236
Query: 244 RPRRL 248
+P+RL
Sbjct: 237 KPQRL 241
>gi|115480119|ref|NP_001063653.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|50725348|dbj|BAD34420.1| ribonucleoprotein antigen-like [Oryza sativa Japonica Group]
gi|113631886|dbj|BAF25567.1| Os09g0513700 [Oryza sativa Japonica Group]
gi|215704450|dbj|BAG93884.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222641906|gb|EEE70038.1| hypothetical protein OsJ_29992 [Oryza sativa Japonica Group]
Length = 375
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 82/156 (52%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP +GDPY T+FV RLS T + +++E YG +K +
Sbjct: 51 YDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKEMSRYGRVKSM---------------- 94
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV D T RGYAF+EY R+M+ AY+ A +DG VLVD R + +P W
Sbjct: 95 -----RLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGSEVLVDYYRQQLMPGW 149
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRR GGGLG + G+ R+ GRE+ P R P R
Sbjct: 150 IPRRSGGGLGGKKESGQ---LRFGGRER-PFRAPLR 181
>gi|430811873|emb|CCJ30667.1| unnamed protein product [Pneumocystis jirovecii]
Length = 177
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/182 (39%), Positives = 96/182 (52%), Gaps = 30/182 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L LL LF+ R PL Y PP P R+ P ++G+A++V A+ Y + E+
Sbjct: 5 LPPPLLALFQARPPLRYLPPCDIAPSLRRTPRISGIARYVPLLAD-----YDKDYQPTES 59
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E+R R + + + E + L Y P DPN+ GDPYKTLFV+RLSY+ TE + RE
Sbjct: 60 WLEKRERRREEKKKIQEEVIRKGLAAYRPRQDPNIKGDPYKTLFVSRLSYKVTEQDLMRE 119
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAY 217
F YG I E++RLVT+ + NKP GYAFI Y RDMK Y
Sbjct: 120 FGRYGAI---------------------ERIRLVTNVKNNKPMGYAFIVYERERDMKGLY 158
Query: 218 KQ 219
KQ
Sbjct: 159 KQ 160
>gi|119572836|gb|EAW52451.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_f [Homo sapiens]
Length = 304
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/151 (49%), Positives = 86/151 (56%), Gaps = 46/151 (30%)
Query: 120 ELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSR 179
ELK +DPHNDPN GD +KTLF+
Sbjct: 19 ELKMWDPHNDPNAQGDAFKTLFI------------------------------------- 41
Query: 180 DGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
+V K + KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRT
Sbjct: 42 ---------HMVYSKRSGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRT 92
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
V WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 93 VKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 123
>gi|167382928|ref|XP_001736333.1| U1 small nuclear ribonucleoprotein 70 kDa [Entamoeba dispar SAW760]
gi|165901504|gb|EDR27587.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
dispar SAW760]
Length = 422
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 114/221 (51%), Gaps = 37/221 (16%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHF--AEP-------GDPLYAPPV 92
L N LF P P+ + PP EK P +G++ +++ F EP G +AP
Sbjct: 5 LPKNFAALFVPDEPIRFLPPIEKHWFPNYSGVSSYLTMFDQIEPNNEKKTEGADSFAPTW 64
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTES 152
K+ R R K++ EK +++ +DP ++ + +P +T+ V RL +T ES
Sbjct: 65 TKSGL---RELRFLKMKEEK-TRSLRTQIQTWDPTHNLKATDNPNRTIVVLRLPKKTDES 120
Query: 153 KIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-KETNKPRGYAFIEYMHTR 211
+++ F YG IK+++ ++ D K NK GYAF+EY H
Sbjct: 121 ILQQLFGEYGEIKKIV---------------------IIKDLKGINK--GYAFVEYNHRS 157
Query: 212 DMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGL 252
+ + A ++A+G +++ + ++V++E+GRT +++P+RLGG +
Sbjct: 158 EAERACRRANGMRIEEKIIVVEMEKGRTEESFKPKRLGGTI 198
>gi|126324312|ref|XP_001375255.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Monodelphis domestica]
Length = 261
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 125/265 (47%), Gaps = 72/265 (27%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ VSGDP+ TLFV RL+ +TTE K+K F YG I++L
Sbjct: 36 LARYVPNK--GVSGDPHLTLFVGRLNLQTTEEKLKDVFSRYGDIRKL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T + YAFIEY R + AY+ A+G +D + VD E R +
Sbjct: 81 --------RLVRDVVTGFSKRYAFIEYKEERSLLKAYRDANGLVIDQHEIFVDYELERIL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGG G + G+ R+ GR++ P R P P + D +G+ RER
Sbjct: 133 KGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PVFKSDFYGEGQRER--- 183
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRD-RERERDRGRER---DRDRTR 356
RE S RDRT D R R+ DRGRE+ +R+ TR
Sbjct: 184 --------REWS---------------------RDRTWDWRARDHDRGREKRRQERETTR 214
Query: 357 DRDRGRDRGRDHERDREKDRDKERD 381
D ++ER+RE+D ER+
Sbjct: 215 SWD-------ENERERERDFRDERN 232
>gi|225433837|ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera]
gi|297743756|emb|CBI36639.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP V GDPY T+FV L++ TTE + + +G +K L
Sbjct: 47 YDPFGDPKVIGDPYCTVFVGHLNHLTTEDTLHKAMSKFGRVKSL---------------- 90
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T +GYAF+EY R+M+ AY+ A +D ++VD R + +P W
Sbjct: 91 -----RLVRHIVTGASQGYAFVEYETEREMRRAYEDAHHSMIDDCEIIVDYNRQQLMPGW 145
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGG+G + G+ R+ GRE+ P R P R
Sbjct: 146 IPRRLGGGIGGKKESGQ---LRFGGRER-PFRAPLR 177
>gi|393241484|gb|EJD49006.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 363
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 59/125 (47%), Positives = 75/125 (60%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P D GDPYKTLF+ARLS ++ ++R FESYGPI
Sbjct: 109 YKPSEDTEAVGDPYKTLFIARLSKNAADADLRRAFESYGPI------------------- 149
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E+VR+ DK+ + RGYAFI + RDMK AYK+AD + G+ +LVDVERGRTV +W
Sbjct: 150 --ERVRIARDKK-GRSRGYAFIVFDRERDMKVAYKEADKMVILGKAILVDVERGRTVRDW 206
Query: 244 RPRRL 248
+PRRL
Sbjct: 207 KPRRL 211
>gi|218847772|ref|NP_001136383.1| small nuclear ribonucleoprotein 35kDa (U11/U12) [Xenopus (Silurana)
tropicalis]
gi|195539787|gb|AAI67878.1| Unknown (protein for MGC:135224) [Xenopus (Silurana) tropicalis]
Length = 264
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 124/264 (46%), Gaps = 51/264 (19%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP+ TL+VARLS +TTE K+K F YG IKR
Sbjct: 36 LARYVPNK--GVIGDPHLTLYVARLSQQTTEEKLKEVFSRYGDIKR-------------- 79
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
+RLV D T +GYAFIEY + A++ A+ +D R + VD E R +
Sbjct: 80 -------IRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREIFVDFELERNL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR---SAEPRIREDRHGDRDRER 297
W PRRLGGG G + G+ R+ GR++ P R P P E R R R R
Sbjct: 133 KGWVPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINLPIFPHPFNSEGRGERRPRSR 188
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHR----------DDRHHRDRDRTRDRERERDRG 347
S++R D +R D RDR R DD+ H R+R RER R
Sbjct: 189 SKDRSHDWREQR-------RDYGRDRGIRRQDKERPYTKDDKEHNSEHTKRERSRERTRN 241
Query: 348 RERDRDRTR-DRDRGRDRGRDHER 370
D+DR R D R + R R++++
Sbjct: 242 ---DKDRNRKDSKREKSRERNYKK 262
>gi|367017532|ref|XP_003683264.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
gi|359750928|emb|CCE94053.1| hypothetical protein TDEL_0H01940 [Torulaspora delbrueckii]
Length = 318
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 81/226 (35%), Positives = 118/226 (52%), Gaps = 49/226 (21%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPP----EKRK-CPPLTGMAQ--------FVSHFAEPGDP 86
T A++ +LF+PR PL YK P EKR+ CP +TG++Q ++S F +
Sbjct: 6 TKFPADVSRLFKPRPPLAYKKPVDYPLEKRQTCPHITGVSQILDKPLAGYLSDFPQGSQN 65
Query: 87 LYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARL 145
Y EKA R R LE +L ++DP NDPN+ DPY+T+FV RL
Sbjct: 66 KYLQDYEKAADSKNREQR----ELE-------NKLSEWDPQNDPNMKDTDPYRTIFVGRL 114
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
Y+ +E +++R+F +G I EKVR+V DK N+ +GYAFI
Sbjct: 115 PYDISEVELQRKFNEFGEI---------------------EKVRVVRDKINNQSKGYAFI 153
Query: 206 EYMHTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
+ + K+A K+ G ++ GR +VD+ERGRTV ++PRRL
Sbjct: 154 VFTDPQSSKSACKEYGLHRGIEIKGRTCIVDIERGRTVKYFKPRRL 199
>gi|218202449|gb|EEC84876.1| hypothetical protein OsI_32022 [Oryza sativa Indica Group]
Length = 385
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/156 (40%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP +GDPY T+FV RLS T + +++ + + SR G+
Sbjct: 50 YDPFGDPKATGDPYCTVFVGRLSRYTDDETLRKFL--------FLVVYVREQEMSRYGR- 100
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+ +RLV D T RGYAF+EY R+M+ AY+ A +DGR VLVD R + +P W
Sbjct: 101 -VKSMRLVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGREVLVDYYRQQLMPGW 159
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRR GGGLG + G+ R+ GRE+ P R P R
Sbjct: 160 IPRRSGGGLGGKKESGQ---LRFGGRER-PFRAPLR 191
>gi|384497600|gb|EIE88091.1| hypothetical protein RO3G_12802 [Rhizopus delemar RA 99-880]
Length = 178
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 73/125 (58%), Gaps = 29/125 (23%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+DP D N++GDP+ TLFV LS E TES +++EFE
Sbjct: 2 HDPEKDANITGDPFNTLFVTHLSPELTESDLQKEFE------------------------ 37
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
+RL+ D E K R YAFIE+ +DM+AAYK ADG K+ GRR+LVDVER RTV W
Sbjct: 38 ----IRLIRD-ENGKSRCYAFIEFEREKDMRAAYKDADGLKILGRRILVDVERARTVKGW 92
Query: 244 RPRRL 248
+PRRL
Sbjct: 93 KPRRL 97
>gi|254570158|ref|XP_002492189.1| hypothetical protein [Komagataella pastoris GS115]
gi|238031986|emb|CAY69909.1| hypothetical protein PAS_chr2-2_0449 [Komagataella pastoris GS115]
gi|328351324|emb|CCA37723.1| U1 small nuclear ribonucleoprotein 70 kDa [Komagataella pastoris
CBS 7435]
Length = 295
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 106/206 (51%), Gaps = 28/206 (13%)
Query: 46 LLKLFEPRAPLEY-KP---PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
+ KLFEP+ P ++ +P P E+R+ + G+ + + + + P E +R
Sbjct: 29 IAKLFEPKPPFKFLEPVDYPIEQRRTKIVKGVGGLLDLVKKYNEEV---PYTVTEGNQQR 85
Query: 102 RARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESY 161
+ R+ + + + AEK +L ++P D N+ GD +T+FVARL Y +TE ++ +
Sbjct: 86 QQRLKQEKRKLEAEKLQRDLAAWNPEKDLNMIGDASRTIFVARLDYNSTEVDLQNSLGVF 145
Query: 162 GPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD 221
G I R +R+V D T+K +GY F+ + D + AY+ +
Sbjct: 146 GEIDR---------------------IRVVRDVNTDKSKGYGFVVFKQPDDARTAYRNSS 184
Query: 222 GRKLDGRRVLVDVERGRTVPNWRPRR 247
K++ R VLVD+ERGRTV NW+PRR
Sbjct: 185 SLKINNRPVLVDIERGRTVKNWKPRR 210
>gi|63100588|gb|AAH95150.1| Snrnp70 protein [Danio rerio]
Length = 141
Score = 100 bits (248), Expect = 3e-18, Method: Composition-based stats.
Identities = 65/131 (49%), Positives = 83/131 (63%), Gaps = 8/131 (6%)
Query: 42 LTANLLKLFEPRAPLEYKP-----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ + P P EK P G+A F+ HF +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPFLPQLGKLPHEKHHNQPYCGIAPFIRHFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ELK +DPHND N GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERLERKRREKMERRQVVVEGELKLWDPHNDANAQGDAFKTLFVARINYDTTESKLRR 121
Query: 157 EFESYGPIKRL 167
EFE YGPIKR+
Sbjct: 122 EFEVYGPIKRI 132
>gi|392577664|gb|EIW70793.1| hypothetical protein TREMEDRAFT_73567 [Tremella mesenterica DSM
1558]
Length = 335
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 22/125 (17%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
Y P +D GDPYKTLF++RLS + TE ++REFE YG I
Sbjct: 140 YRPQDDTKAVGDPYKTLFISRLSSKATEQDLRREFEMYGAI------------------- 180
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
E +R+V +++ K YAFI Y RDMKAAYK A+G + +++LVDVERGRTV W
Sbjct: 181 --EHIRIVRNRK-GKSNSYAFIVYERERDMKAAYKDAEGIPIHHKKILVDVERGRTVKGW 237
Query: 244 RPRRL 248
+PRRL
Sbjct: 238 KPRRL 242
>gi|398407635|ref|XP_003855283.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
gi|339475167|gb|EGP90259.1| hypothetical protein MYCGRDRAFT_108339 [Zymoseptoria tritici
IPO323]
Length = 603
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/213 (37%), Positives = 114/213 (53%), Gaps = 35/213 (16%)
Query: 42 LTANLLKLFEPRAPLEYKP----PPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF+PR PL Y P PE R+ + G++ F+ AE + P+ +E+
Sbjct: 5 LPPNLLALFQPRPPLRYLPPHDYAPEDRRTRAIDGVSAFLPALAEKVESSKNDPI--SES 62
Query: 98 PVERRARIHKLRLEKGAEKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
+ERR R+ + + K A E +K+ Y P D N+ GD ++T+F+ RL Y T ++
Sbjct: 63 WLERRDRLTRDKAAKQAWVTGEGVKELYKPTEDENIRGDAFRTIFIGRLPYTCTTKDLEH 122
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP------RGYAFIEYMHT 210
EF +GPI E+VR+VTD+ + KP RGYAF+ +
Sbjct: 123 EFGRFGPI---------------------ERVRIVTDR-SEKPSKKGTSRGYAFVLFESE 160
Query: 211 RDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RDMKAAYK+++ + R VLVDVERGRTV W
Sbjct: 161 RDMKAAYKESERLLIRNRPVLVDVERGRTVTGW 193
>gi|149055934|gb|EDM07365.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_d [Rattus norvegicus]
Length = 148
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 84/130 (64%), Gaps = 8/130 (6%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRK-----CPPLTGMAQFVSHFAEPGDPLYAPPVEKAE 96
L NLL LF PR P+ Y PP EK P G+A ++ F +P D APP +AE
Sbjct: 5 LPPNLLALFAPRDPIPYLPPLEKLPHEKHHNQPYCGIAPYIREFEDPRD---APPPTRAE 61
Query: 97 TPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKR 156
T ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK++R
Sbjct: 62 TREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKLRR 121
Query: 157 EFESYGPIKR 166
EFE YGPIKR
Sbjct: 122 EFEVYGPIKR 131
>gi|350536563|ref|NP_001232485.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128442|gb|ACH44940.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128443|gb|ACH44941.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128444|gb|ACH44942.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
gi|197128445|gb|ACH44943.1| putative U11/U12 snRNP 35K [Taeniopygia guttata]
Length = 265
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 114/242 (47%), Gaps = 54/242 (22%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIK--RLICNSCNGGDSS 178
L +Y P+ V GDP+ TLFVARL+ +TTE K+K F YG I+ RL+ + G
Sbjct: 36 LARYVPNK--GVMGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFS-- 91
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
+GYAFIEY R + A++ A+ +D + VD E R
Sbjct: 92 ---------------------KGYAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELER 130
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER- 297
T+ W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ E+
Sbjct: 131 TLKGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PNMKNDFYGEGSSEKR 184
Query: 298 --SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR-----DRERERDRGRER 350
SRE RD R RDRDH R R +R R D ERERD ER
Sbjct: 185 NWSREGTRDW-------------RTRDRDHERSRDKRWPERERSWAWGDSERERDSKEER 231
Query: 351 DR 352
R
Sbjct: 232 SR 233
>gi|224161968|ref|XP_002188436.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Taeniopygia guttata]
Length = 265
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 115/242 (47%), Gaps = 54/242 (22%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIK--RLICNSCNGGDSS 178
+ +Y P+ V+GDP+ TLFVARL+ +TTE K+K F YG I+ RL+ + G
Sbjct: 36 MARYVPNK--GVTGDPHLTLFVARLNLQTTEEKLKEVFSRYGDIRKIRLVRDLVTGFS-- 91
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGR 238
+GYAFIEY R + A++ A+ +D + VD E R
Sbjct: 92 ---------------------KGYAFIEYKEERALLKAHRDANRLVIDQHEIFVDFELER 130
Query: 239 TVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRER- 297
T+ W PRRLGGG G + G+ R+ GR++ P R P P ++ D +G+ E+
Sbjct: 131 TLKGWIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRKPINL--PNMKNDFYGEGSSEKR 184
Query: 298 --SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR-----DRERERDRGRER 350
SRE RD R RDRDH R R +R R D ERERD ER
Sbjct: 185 NWSREGTRDW-------------RTRDRDHERSRDKRWPERERSWAWGDSERERDSKEER 231
Query: 351 DR 352
R
Sbjct: 232 SR 233
>gi|449542311|gb|EMD33290.1| hypothetical protein CERSUDRAFT_117917 [Ceriporiopsis subvermispora
B]
Length = 378
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/232 (36%), Positives = 111/232 (47%), Gaps = 57/232 (24%)
Query: 42 LTANLLKLFEPRAPLEYKPP---------PEKRKCPPLTGMAQFVSHF----------AE 82
L NLLKLF PR L Y P P+K + G+A ++ A
Sbjct: 7 LPPNLLKLFAPRPALPYTRPLDRDIDRVRPKK-----VDGVAHILAQLEEDKTQGMINAG 61
Query: 83 PGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKK------YDPHNDPNVSGDP 136
G+ + E+ E P A K +L + K +E + Y P +P V GDP
Sbjct: 62 QGEVM-----EEGEEPTFTLAEEVKRQLRREERKKKKEEEFKLAKENYKPQENPEVVGDP 116
Query: 137 YKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKET 196
YKTLFVA L TE+ ++REFE +G + E+VR+V DK
Sbjct: 117 YKTLFVAHLPKHATENDVRREFERFGSL---------------------ERVRIVRDKRG 155
Query: 197 NKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
N R YAF+ + RDMKAA+K +D + G RVLVDVERGRTV W+PRRL
Sbjct: 156 NS-RKYAFVVFERERDMKAAFKSSDDIAVMGARVLVDVERGRTVRGWKPRRL 206
>gi|45187810|ref|NP_984033.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|44982571|gb|AAS51857.1| ADL063Wp [Ashbya gossypii ATCC 10895]
gi|374107246|gb|AEY96154.1| FADL063Wp [Ashbya gossypii FDAG1]
Length = 320
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/217 (33%), Positives = 107/217 (49%), Gaps = 49/217 (22%)
Query: 49 LFEPRAPLEYKPP----PEKRKCPPLT---------GMAQFVSHFAEPGDPLYAPPVEKA 95
LF+PR PL+Y+ P PE+RK +T + +++ F P
Sbjct: 15 LFKPRPPLQYRKPVDYAPEERKTATITPVSSVLGTDALMRYMQEF----------PTGSE 64
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESKI 154
++R + + K E EEL K+ P ND N+ G DP++T+FV RL Y+ E ++
Sbjct: 65 NLLIQRYEELKTINSRKEQE-LEEELAKWAPENDTNIQGTDPFRTIFVGRLHYDVDELEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I E+VR+V DK TNKPRGYAF+ + K
Sbjct: 124 QKHFIKFGEI---------------------ERVRIVRDKITNKPRGYAFVLFRDPECSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
AY++ G + GR +VD+ERGRTV +RPRRL
Sbjct: 163 KAYREIGVHRGLMIRGRSAIVDIERGRTVKFFRPRRL 199
>gi|440791001|gb|ELR12257.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 288
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 93/242 (38%), Positives = 123/242 (50%), Gaps = 48/242 (19%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
+DP DP + G +T+FV RL + T E ++ FE +GPI+ L
Sbjct: 37 HDPSQDPQIRGSARRTVFVGRLDFVTNEETLRTTFERFGPIRHL---------------- 80
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV D T K +GYAF+EY H D AAY+ G+ +D RVLV++ER RT+ W
Sbjct: 81 -----RLVRDIVTGKSKGYAFVEYEHESDAHAAYRDMHGKDIDQARVLVEMERERTMAGW 135
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGR 303
PRRLGGGLG + G+ R+ GR++ P R P R + + + R G S ERG
Sbjct: 136 VPRRLGGGLGGKKESGQ---IRFGGRDR-PWRQPLRFNQ--LAQQRGG-----MSGERG- 183
Query: 304 DREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRD 363
R+ ERE S +L+H R RD + DR R+RE RG ER RD GR
Sbjct: 184 GRQAEREASEDLAH---RQRDRGQEAEGGDR-----RQREEQRGLER-------RDSGRG 228
Query: 364 RG 365
G
Sbjct: 229 EG 230
>gi|91086635|ref|XP_966565.1| PREDICTED: similar to U11/U12 snRNP 35K [Tribolium castaneum]
gi|270009757|gb|EFA06205.1| hypothetical protein TcasGA2_TC009054 [Tribolium castaneum]
Length = 194
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 58/151 (38%), Positives = 80/151 (52%), Gaps = 25/151 (16%)
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDE 186
H + +V G P T+FV+RLS +TT+ IK F YGP++R
Sbjct: 45 HPNRHVKGRPECTIFVSRLSLKTTKDTIKDIFSKYGPLRRF------------------- 85
Query: 187 KVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPR 246
RLV D T P+GYAFIEY + D + AY +A+ +DG + VD E R + WRPR
Sbjct: 86 --RLVKDIVTGMPKGYAFIEYENELDAEEAYCKANKMNIDGNIIFVDFECERLLKGWRPR 143
Query: 247 RLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
RLGGG G + G+ R+ GR++ P + P
Sbjct: 144 RLGGGFGGKKESGQ---LRFGGRDR-PFKKP 170
>gi|302917047|ref|XP_003052334.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
gi|256733273|gb|EEU46621.1| hypothetical protein NECHADRAFT_100222 [Nectria haematococca mpVI
77-13-4]
Length = 431
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/242 (35%), Positives = 115/242 (47%), Gaps = 52/242 (21%)
Query: 42 LTANLLKLFEPRAPLEY-KPP---PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF R PL + +PP P+ RK P++G+AQF+ + + P E
Sbjct: 5 LPPNLLALFAARPPLRWVEPPDHAPQNRKTAPISGVAQFLPELQKYKETDVYNPTESWLQ 64
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+R+ + K LE E + K Y P+ DPNV GD +KTL VARLSY+ E +++E
Sbjct: 65 ARDRKKQEKKQDLE---ELVTQAPKLYKPNEDPNVRGDAFKTLIVARLSYDADERDLEKE 121
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP-RGYAFIEYMHTRDMKAA 216
F +GPI+R+ D+ KP +K KP RGYAF+ + +DM+
Sbjct: 122 FGRFGPIERIRIIV----DTHAHEKPNKKK----------KPHRGYAFVVFEREKDMRER 167
Query: 217 YKQA----------------------------DGRKLDG--RRVLVDVERGRTVPNWRPR 246
QA RK+ RR+ VDVERGRTV WRPR
Sbjct: 168 GPQACPFFKVYGETQGPSSLPVSAIPFLLSTHSARKVLFMDRRIKVDVERGRTVKGWRPR 227
Query: 247 RL 248
RL
Sbjct: 228 RL 229
>gi|449459836|ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
Length = 333
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/156 (42%), Positives = 82/156 (52%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDPH DP V GDPY TLFV RLS+ TTE ++R YG +K L
Sbjct: 47 YDPHGDPKVFGDPYCTLFVGRLSHLTTEDTLRRAMSKYGQVKNL---------------- 90
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T RGYAF+EY ++M+ AYK A +D ++VD R R + W
Sbjct: 91 -----RLVRHIVTGSSRGYAFVEYETEKEMQRAYKDAHHSMIDDCEIIVDYNRQRLMSGW 145
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGGLG + G+ R+ GRE+ P R P R
Sbjct: 146 IPRRLGGGLGGKKESGQ---LRFGGRER-PFRAPLR 177
>gi|431912140|gb|ELK14278.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Pteropus
alecto]
Length = 246
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 122/249 (48%), Gaps = 51/249 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D++ RE
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKTDQY--------RE 178
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR-------TRDRERERD------RG 347
RD+ RPRDRDH R R ++R D ERERD +G
Sbjct: 179 GKRDKRERSRSRERHWESRPRDRDHDRGREKRWQEREPPRVWPESDWERERDFRDDRVKG 238
Query: 348 RERDRDRTR 356
RE+ RDR++
Sbjct: 239 REK-RDRSK 246
>gi|401889211|gb|EJT53150.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 2479]
gi|406698908|gb|EKD02129.1| U1 snRNP 70K protein (short form) [Trichosporon asahii var. asahii
CBS 8904]
Length = 334
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 69/113 (61%), Gaps = 21/113 (18%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
PYKTLF++RLS + TE+ ++ EFE YG I EK+R+V DK
Sbjct: 133 PYKTLFISRLSSKATEADLRHEFEMYGHI---------------------EKIRIVRDKR 171
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
K R YAFI + RDMKAAYK ADG + +++LVDVERGRTV W+PR+L
Sbjct: 172 KGKSRNYAFIVFERERDMKAAYKDADGIPIHHKKILVDVERGRTVKGWKPRKL 224
>gi|358339950|dbj|GAA47912.1| U1 small nuclear ribonucleoprotein 70kDa [Clonorchis sinensis]
Length = 166
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 62/90 (68%), Gaps = 3/90 (3%)
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
+V ++ T KPRGYAF+E+ H R+M AA K +G+K+DG R+L D+ERGRT P+WRPRRLG
Sbjct: 1 MVKNRLTGKPRGYAFVEFEHEREMHAAVKGLNGKKIDGMRILTDIERGRTRPDWRPRRLG 60
Query: 250 GGLGTTRVGGEE---VNQRYSGREQEPSRG 276
GLG R G E V+ ++ + PS G
Sbjct: 61 KGLGKNRQGPSEKPKVSSKHENGREPPSHG 90
>gi|73995146|ref|XP_534648.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Canis lupus familiaris]
Length = 246
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/232 (38%), Positives = 114/232 (49%), Gaps = 55/232 (23%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGLSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P I+ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PIIKNDQYREGKREKRER 186
Query: 289 ----------RHGDRDRERSRERGRDREREREKS-LELSHDRPRDRDHRDDR 329
R DRD +R+RE+ R +ERE S + L D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRNREK---RWQEREPSRVWLESDWERERDFRDDR 235
>gi|300175328|emb|CBK20639.2| unnamed protein product [Blastocystis hominis]
Length = 152
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/118 (44%), Positives = 68/118 (57%), Gaps = 22/118 (18%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
TLF+ LSY T E++++ E YGPI+ L+ +V D + K
Sbjct: 3 TLFIGNLSYLTQENRLRELCEKYGPIESLV---------------------IVKDHD-GK 40
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTR 256
RGYAF+EY ++ DM AYK+ LD R+++VDVERGRTV W P RLGGGLG TR
Sbjct: 41 SRGYAFVEYTYSNDMTTAYKRLRRHPLDERKLIVDVERGRTVRKWLPARLGGGLGKTR 98
>gi|255577755|ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus
communis]
Length = 389
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/158 (39%), Positives = 83/158 (52%), Gaps = 25/158 (15%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP V GDP+ TLFV RLS+ TTE+ + + YG ++ L
Sbjct: 47 YDPLGDPKVIGDPFCTLFVGRLSHSTTENTLLKAMSKYGKVRNL---------------- 90
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV D T RGYAF+EY R+M+ AY A +D ++VD R + +P W
Sbjct: 91 -----RLVRDIVTGASRGYAFVEYGTEREMRRAYMDAHHSFIDDSEIIVDYNRQQLMPGW 145
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSA 281
PRRLGGGLG + G+ R+ GRE+ P R P +S
Sbjct: 146 IPRRLGGGLGGRKESGQ---LRFGGRER-PFRAPLQSV 179
>gi|156836695|ref|XP_001642396.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112914|gb|EDO14538.1| hypothetical protein Kpol_259p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 332
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 109/216 (50%), Gaps = 39/216 (18%)
Query: 49 LFEPRAPLEY-----KPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRA 103
L +PRAPL++ P +++ P ++G++ +S+ D + PV +++
Sbjct: 15 LMKPRAPLKFLKQSDNPLNQRKTNPNISGVSSLLSN-NTLTDYMNEFPVGTDNKHLQKYE 73
Query: 104 RIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIKREFESYG 162
+ ++ + K +EL K++P+NDPNV DPY+T+FV RL Y+ E +++ F +G
Sbjct: 74 LVRNQKINE-LNKLDDELMKWNPNNDPNVKDTDPYRTIFVGRLPYDVNEMDLQKLFNKFG 132
Query: 163 PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKET-------NKPRGYAFIEYMHTRDMKA 215
I EKVR+V DK+T RGYAFI + K
Sbjct: 133 QI---------------------EKVRIVRDKKTITKTNPLGNSRGYAFIVFADQLSSKM 171
Query: 216 AYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A K+ G +++GR +VD+ERGRTV ++PRR
Sbjct: 172 ACKEIGVHRGIEINGRNCIVDIERGRTVKYFKPRRF 207
>gi|365765125|gb|EHN06639.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/217 (32%), Positives = 110/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ GR +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKGRVCIVDIERGRTVKYFKPRRL 199
>gi|47207553|emb|CAF91719.1| unnamed protein product [Tetraodon nigroviridis]
Length = 280
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/57 (70%), Positives = 47/57 (82%)
Query: 187 KVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
++ +V +K T KPRGYAFIEY H RDM +AYK ADG+K+DGRRVLVDVERGRTV W
Sbjct: 1 QIYIVYNKRTGKPRGYAFIEYEHERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGW 57
>gi|410084527|ref|XP_003959840.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
gi|372466433|emb|CCF60705.1| hypothetical protein KAFR_0L00970 [Kazachstania africana CBS 2517]
Length = 285
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 111/223 (49%), Gaps = 48/223 (21%)
Query: 42 LTANLLKLFEPRAPLEYKPP---PE--KRKCPPLTG----MAQFVSHFAEPGDPLYAPPV 92
+++ +LF+P PL YK P PE +R P +T +AQ + E D
Sbjct: 8 FPSDVTRLFKPNPPLPYKRPSDYPEEQRRTNPNITPVSNYLAQLTDYINEYSD------- 60
Query: 93 EKAETP---VERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-SGDPYKTLFVARLSYE 148
TP +E I +L+ E EL+K+DP ND N + DPYKT+F+ RL Y
Sbjct: 61 ---GTPNKHLEAYEEIRTSQLQ-NLEYLHNELQKWDPMNDVNSQNTDPYKTIFIGRLPYN 116
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE ++++ F +G I EK+R+V D +T+KP+GY FI +
Sbjct: 117 VTEIELQKIFIKFGEI---------------------EKIRIVKDIKTDKPKGYGFILFN 155
Query: 209 HTRDMKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
K A ++ G +++GR +VD+ERGR+V ++PRRL
Sbjct: 156 EANAAKMAVREIGTHRGIEINGRSCIVDIERGRSVKYFKPRRL 198
>gi|156387741|ref|XP_001634361.1| predicted protein [Nematostella vectensis]
gi|156221443|gb|EDO42298.1| predicted protein [Nematostella vectensis]
Length = 254
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/155 (36%), Positives = 75/155 (48%), Gaps = 27/155 (17%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
KY P + V+GD TLF+ RLS ET + F YG +
Sbjct: 41 KYKP--NKQVAGDAGCTLFIGRLSKETRAETLVEAFSKYGEV------------------ 80
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
E RLV D T RGYAF+E+ D K AY++ +DG+ +LV+ E GR +
Sbjct: 81 ---ENCRLVRDFVTGFSRGYAFVEFKERWDAKTAYREISKCCIDGQEILVEFEAGRNLEG 137
Query: 243 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
W PRRLGGG G + G+ R+ GR++ P R P
Sbjct: 138 WIPRRLGGGFGGKKESGQ---LRFGGRDR-PFRRP 168
>gi|392876104|gb|AFM86884.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 116/250 (46%), Gaps = 34/250 (13%)
Query: 131 NVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRL 190
VSGDP+ TLFVARL+ +TTE K++ F +G ++RL RL
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRL---------------------RL 83
Query: 191 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 250
V D T + Y FIEY R + A++ A+ +D + VD E R + W PRR GG
Sbjct: 84 VRDLVTGFSKCYGFIEYREERSLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGG 143
Query: 251 GLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERERE 310
GLG + G+ R+ GR++ P R P + E + G +R SRER +D +
Sbjct: 144 GLGGKKESGQ---LRFGGRDR-PFRKPIHLPALYV-EGQVGKPERAGSRERFKDGWQRDR 198
Query: 311 KSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHER 370
R R+R + +RD RER+R R++D R+H+R
Sbjct: 199 DRDRDRDRDRDRDRDRQRERGRERGGRDEGREKRDGERERERYRSKD--------REHKR 250
Query: 371 DREKDRDKER 380
RE DR + +
Sbjct: 251 HREGDRHQHK 260
>gi|2289001|gb|AAB64330.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
Length = 292
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 127/264 (48%), Gaps = 40/264 (15%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP D GDPY TLFV RLS+ TTE ++ YG IK L
Sbjct: 44 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNL---------------- 87
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T RGY F+EY ++M AY+ A +DGR ++VD R + +P W
Sbjct: 88 -----RLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGW 142
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGR 303
PRRLGGGLG + G+ R+ GR++ P R P +R+ DR+ E RE+
Sbjct: 143 IPRRLGGGLGGRKESGQ---LRFGGRDR-PFRAP-------LRKGSVSDREEEYYREKSS 191
Query: 304 -DRERE-REKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE---RERDRGRERDRDRTRDR 358
+RE E +E+S S+ R H H R R++DRE RE R ++R R +
Sbjct: 192 VEREEEFKERSSLRSYHSHRSSAHTHSSHRR---RSKDREECSREESRSDRKERARGMED 248
Query: 359 DRGRDRGRDHERDREKDRDKERDR 382
G ++G R K +++R R
Sbjct: 249 RYGDNKGEVSGSKRSKRSEEDRSR 272
>gi|335301144|ref|XP_003359137.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like isoform 1 [Sus scrofa]
Length = 246
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRQPINL--PVVKNDQFREGKRERRER 186
Query: 290 ------HGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
H D R R+R +RGRD R +ERE + + D R+RD RDDR
Sbjct: 187 SRSRERHWDSRMRDRGHDRGRDKRWQEREPARVWPEGDWERERDFRDDR 235
>gi|410976458|ref|XP_003994637.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Felis catus]
Length = 246
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDQYREVKREKRER 186
Query: 290 ------HGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
H D R R+R +RGR+ R +ERE + + D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPESDWERERDFRDDR 235
>gi|402590301|gb|EJW84232.1| hypothetical protein WUBG_04858, partial [Wuchereria bancrofti]
Length = 156
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/149 (41%), Positives = 84/149 (56%), Gaps = 25/149 (16%)
Query: 65 RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKY 124
RK P ++G+++++ F +P D PP ET ERRAR K + E A K + + +
Sbjct: 32 RKRPKMSGLSEYIHLFEDPKD---TPPKPVYETKEERRARRRKEKEELLAYKIEQGIATW 88
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
+P +P+ + DPYKTLFVAR++YET+ESK++REFE +G I RL
Sbjct: 89 NPAQNPSATADPYKTLFVARINYETSESKLRREFEQFGKITRL----------------- 131
Query: 185 DEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
LV DK KPRGYAFIEY H M
Sbjct: 132 ----ALVHDKN-GKPRGYAFIEYQHKESM 155
>gi|170583875|ref|XP_001896768.1| RNA binding protein [Brugia malayi]
gi|158595926|gb|EDP34382.1| RNA binding protein, putative [Brugia malayi]
Length = 189
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/173 (43%), Positives = 99/173 (57%), Gaps = 29/173 (16%)
Query: 45 NLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
NLL LFE R PL YKPPP+ RK P ++G+++++ F +P D PP E+ E
Sbjct: 35 NLLALFEARPPLPYKPPPDDLLIDRKRPKMSGLSEYIHLFEDPKD---TPPKPVYESKEE 91
Query: 101 RRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFES 160
RRAR K + E A K + + ++P +P+ + DPYKTLFVAR++YET+ESK++REFE
Sbjct: 92 RRARRRKEKEELLAYKIEQGIATWNPAQNPSATTDPYKTLFVARINYETSESKLRREFEQ 151
Query: 161 YGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
+G I RL LV DK KPRGYAFIEY H M
Sbjct: 152 FGKITRL---------------------ALVHDKN-GKPRGYAFIEYQHKESM 182
>gi|387914692|gb|AFK10955.1| u11/U12 small nuclear ribonucleoprotein-like protein [Callorhinchus
milii]
Length = 264
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 112/250 (44%), Gaps = 34/250 (13%)
Query: 131 NVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRL 190
VSGDP+ TLFVARL+ +TTE K++ F +G ++RL RL
Sbjct: 45 GVSGDPHLTLFVARLNPQTTEQKLRDTFSRFGDVRRL---------------------RL 83
Query: 191 VTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 250
V D T + Y FIEY R + A++ A+ +D + VD E R + W PRR GG
Sbjct: 84 VRDLVTGFSKCYGFIEYREERSLVKAHRDANKLLVDQHELFVDFELERVLKGWMPRRFGG 143
Query: 251 GLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERERE 310
GLG G +E Q G P R P + E + G +R SRER +D +
Sbjct: 144 GLG----GKKESGQLRLGGRDRPFRKPIHLPALYV-EGQVGKPERAGSRERFKDGWQRDR 198
Query: 311 KSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHER 370
R R+R + +RD RER+R R++D R+H+R
Sbjct: 199 DRDRDRDRDRDRDRDRQRERGRERGGRDEGREKRDGERERERYRSKD--------REHKR 250
Query: 371 DREKDRDKER 380
RE DR + +
Sbjct: 251 HREGDRHRHK 260
>gi|363751975|ref|XP_003646204.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889839|gb|AET39387.1| hypothetical protein Ecym_4324 [Eremothecium cymbalariae
DBVPG#7215]
Length = 331
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/215 (35%), Positives = 112/215 (52%), Gaps = 43/215 (20%)
Query: 48 KLFEPRAPLEYKPP----PEKRK---CPPLTGMA---QFVSHFAEPGDPLYAPPVEKAET 97
KLF PR PL+YK P PEKR+ PL+ + V + E ++K E
Sbjct: 14 KLFNPRPPLQYKKPVDYPPEKRRTHFIAPLSSLVFSDTLVRYMQEHPQGSENRHLDKYEE 73
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKIKR 156
AR +L LE AE+A K+ P D N++ DP++T+FV RL YE E ++++
Sbjct: 74 VRSLTARNERL-LE--AEQA-----KWVPEEDSNINDTDPFRTIFVGRLPYEVDELELQK 125
Query: 157 EFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAA 216
+F +G I E+VR+V DK TN+P+GYAF+ + T + A
Sbjct: 126 QFIKFGDI---------------------ERVRIVRDKLTNEPKGYAFVLFKDTEGSRKA 164
Query: 217 YKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
Y++ G + GR V+VD+ERGRTV ++PRRL
Sbjct: 165 YREIGVHRGLLIKGRPVIVDIERGRTVKFFKPRRL 199
>gi|149720723|ref|XP_001498122.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Equus caballus]
Length = 246
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 85/227 (37%), Positives = 112/227 (49%), Gaps = 45/227 (19%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYAPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG--------- 291
W PRRLGGGLG + G+ R+ GR++ P R P + + R G
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINLPVVKNEQYREGKREKRERSR 188
Query: 292 -------DRDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
R R+R +RGR+ R +ERE + + D R+RD RDDR
Sbjct: 189 SRERHWDSRTRDRDHDRGREKRWQEREPTRVWPESDWERERDFRDDR 235
>gi|323348131|gb|EGA82385.1| Snp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 300
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 105/214 (49%), Gaps = 47/214 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLE--KGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 245
A+K+ G ++ R +VD+ERGRTV + P
Sbjct: 163 MAFKEIGVHRGIQIKDRVCIVDIERGRTVKYFXP 196
>gi|323304496|gb|EGA58262.1| Snp1p [Saccharomyces cerevisiae FostersB]
Length = 300
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKDRXCIVDIERGRTVKYFKPRRL 199
>gi|109099573|ref|XP_001089715.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Macaca mulatta]
Length = 246
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + L +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRLWPDNDWERERDFRDDR 235
>gi|355564803|gb|EHH21303.1| hypothetical protein EGK_04324, partial [Macaca mulatta]
gi|355759389|gb|EHH61611.1| hypothetical protein EGM_19603, partial [Macaca fascicularis]
Length = 247
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 37 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 81
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 82 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 133
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 134 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRER 187
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + L +D R+RD RDDR
Sbjct: 188 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRLWPDNDWERERDFRDDR 236
>gi|242045290|ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/210 (32%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G + +A+ P+ A ++ + A + L + YDP D
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRAL--------ICSQAGLYDPFGD 52
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P SGDPY T+FV RLS +T + +++ YG +K + R
Sbjct: 53 PKASGDPYCTVFVGRLSRQTDDDTLRKAMSRYGRVKSM---------------------R 91
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
LV D T RGYAF+EY R+M+ AY+ A +DG V+VD R + +P W PRRLG
Sbjct: 92 LVRDIVTGASRGYAFVEYETDREMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGWIPRRLG 151
Query: 250 GGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
GGLG + G+ R+ GRE+ P R P R
Sbjct: 152 GGLGGMKESGQ---LRFGGRER-PFRAPLR 177
>gi|323354596|gb|EGA86432.1| Snp1p [Saccharomyces cerevisiae VL3]
Length = 300
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKBRVCIVDIERGRTVKYFKPRRL 199
>gi|281343806|gb|EFB19390.1| hypothetical protein PANDA_000935 [Ailuropoda melanoleuca]
Length = 247
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 81
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 82 --------RLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 133
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 134 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PIVKNDQYREGKREKRER 187
Query: 290 ------HGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
H D R R+R +RGR+ R ++RE + + D R+RD RDDR
Sbjct: 188 SRSRERHWDSRTRDRDHDRGREKRWQDREPARVWPESDWERERDFRDDR 236
>gi|190406278|gb|EDV09545.1| hypothetical protein SCRG_05237 [Saccharomyces cerevisiae RM11-1a]
gi|207344323|gb|EDZ71507.1| YIL061Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259147197|emb|CAY80450.1| Snp1p [Saccharomyces cerevisiae EC1118]
gi|323333165|gb|EGA74565.1| Snp1p [Saccharomyces cerevisiae AWRI796]
gi|323337193|gb|EGA78447.1| Snp1p [Saccharomyces cerevisiae Vin13]
gi|392298660|gb|EIW09756.1| Snp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 300
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKDRVCIVDIERGRTVKYFKPRRL 199
>gi|256269775|gb|EEU05041.1| Snp1p [Saccharomyces cerevisiae JAY291]
Length = 300
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKDRVCIVDIERGRTVKYFKPRRL 199
>gi|6322128|ref|NP_012203.1| Snp1p [Saccharomyces cerevisiae S288c]
gi|266985|sp|Q00916.1|RU17_YEAST RecName: Full=U1 small nuclear ribonucleoprotein 70 kDa homolog;
Short=U1 70K; Short=U1 snRNP 70 kDa homolog;
Short=U1-70K; AltName: Full=U1 small nuclear
ribonucleoprotein SNP1; Short=U1 snRNP protein SNP1
gi|4504|emb|CAA42602.1| U1 snRNP 70K protein homologue [Saccharomyces cerevisiae]
gi|557808|emb|CAA86162.1| snp1 [Saccharomyces cerevisiae]
gi|45270060|gb|AAS56411.1| YIL061C [Saccharomyces cerevisiae]
gi|151943102|gb|EDN61437.1| U1 70K [Saccharomyces cerevisiae YJM789]
gi|285812590|tpg|DAA08489.1| TPA: Snp1p [Saccharomyces cerevisiae S288c]
gi|349578892|dbj|GAA24056.1| K7_Snp1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 300
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYK-----PPPEKRKCPPLTGMAQFVS----HFAEPGDPLYAPPVEKAE-T 97
+LF+PR PL YK P +++ P +TG+A +S H+ E E E +
Sbjct: 14 RLFKPRPPLSYKRPTDYPYAKRQTNPNITGVANLLSTSLKHYME----------EFPEGS 63
Query: 98 PVERRARIHKLRLEK--GAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
P R ++L K A+ L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++
Sbjct: 64 PNNHLQRYEDIKLSKIKNAQLLDRRLQNWNPNVDPHIKDTDPYRTIFIGRLPYDLDEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I EK+R+V DK T K +GYAFI + K
Sbjct: 124 QKYFVKFGEI---------------------EKIRIVKDKITQKSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G ++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIKDRICIVDIERGRTVKYFKPRRL 199
>gi|344297375|ref|XP_003420374.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Loxodonta africana]
Length = 259
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 92/242 (38%), Positives = 120/242 (49%), Gaps = 53/242 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKDERSLLNAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKSLELS-HDRPRDRDHRDD----RHHRDRDR 336
RH D R R+R +RGR+ R +ERE + +D R+RD RDD R RDR +
Sbjct: 187 SQSRERHWDSRPRDRDHDRGREKRWQEREPARAWPDNDWERERDFRDDRLKGREKRDRSK 246
Query: 337 TR 338
R
Sbjct: 247 WR 248
>gi|301754651|ref|XP_002913143.1| PREDICTED: u11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Ailuropoda melanoleuca]
Length = 246
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PIVKNDQYREGKREKRER 186
Query: 290 ------HGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
H D R R+R +RGR+ R ++RE + + D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQDREPARVWPESDWERERDFRDDR 235
>gi|297824313|ref|XP_002880039.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
gi|297325878|gb|EFH56298.1| hypothetical protein ARALYDRAFT_483444 [Arabidopsis lyrata subsp.
lyrata]
Length = 333
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/155 (41%), Positives = 79/155 (50%), Gaps = 25/155 (16%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
DP D GDPY TLFV RLS+ TTE I+ YG IK L
Sbjct: 51 DPSGDSKAIGDPYCTLFVGRLSHHTTEDTIREVMSKYGWIKNL----------------- 93
Query: 185 DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
RLV T RGYAF+EY ++M AY+ A +DGR V+VD R + +P W
Sbjct: 94 ----RLVRHIVTGASRGYAFVEYETEKEMLCAYEDAHHSLIDGREVIVDYNRQQLMPGWI 149
Query: 245 PRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGGLG + G+ R+ GR++ P R P R
Sbjct: 150 PRRLGGGLGGRKESGQ---LRFGGRDR-PFRAPLR 180
>gi|168024474|ref|XP_001764761.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684055|gb|EDQ70460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 494
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 80/156 (51%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DPN GDPY +LFV RLS +T E + + +G IK L
Sbjct: 46 YDPLGDPNAKGDPYCSLFVGRLSTQTDEKSLHKAMSKFGRIKSL---------------- 89
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T GYAF+E+ ++M AY+ A KLDG +LVD R + +P W
Sbjct: 90 -----RLVRHIVTGASCGYAFVEFETEKEMYMAYEGAHLSKLDGASILVDYNRQQLMPGW 144
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGGLG + G+ R+ GR++ P R P R
Sbjct: 145 IPRRLGGGLGGKKESGQ---LRFGGRDR-PFRAPLR 176
>gi|119618819|gb|EAW98413.1| U11/U12 snRNP 35K, isoform CRA_b [Homo sapiens]
Length = 278
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|71834616|ref|NP_001025412.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Danio
rerio]
gi|123916690|sp|Q4KMD3.1|U1SBP_DANRE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|68533621|gb|AAH98619.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Danio rerio]
Length = 208
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/157 (41%), Positives = 86/157 (54%), Gaps = 27/157 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +TTE K++ F +G I+RL
Sbjct: 35 LARYKPNR--GVCGDPDLTLFVARLNPQTTEEKLRDVFSKFGDIRRL------------- 79
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T + YAFIEY R +K A++ A+ LD +LVDVE+ RT+
Sbjct: 80 --------RLVRDVVTGFSKRYAFIEYKEERSLKRAWRDANKLILDQYELLVDVEQERTL 131
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
P WRPRRLGGG G + G+ R+ GR++ P R P
Sbjct: 132 PGWRPRRLGGGQGGQKESGQ---LRFGGRDR-PFRKP 164
>gi|365987429|ref|XP_003670546.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
gi|343769316|emb|CCD25303.1| hypothetical protein NDAI_0E04860 [Naumovozyma dairenensis CBS 421]
Length = 323
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/219 (31%), Positives = 113/219 (51%), Gaps = 38/219 (17%)
Query: 42 LTANLLKLFEPRAPL-EYKP---PPEKRKCPP-LTGMAQFV-SHFAEPGDPLYAPPVEKA 95
+++++ +F+PR PL +KP P +R+ P +TG+++++ SH Y
Sbjct: 13 ISSDISTIFKPRPPLRHFKPTDYPVHRRRTNPNITGISKYINSHLLS-----YVKEYSTT 67
Query: 96 ETPVERRARIHKLRL-EKGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESK 153
T +++ L K A++ E L K++PH DPN+ DPY+T+FV RL Y+ E +
Sbjct: 68 TTTNSEVTENNEVVLGNKIAQENKEALDKWNPHEDPNIKDTDPYRTIFVGRLPYDIDELQ 127
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK-ETNKPRGYAFIEYMHTRD 212
+++ F +G I EK+R+V DK NK +GY FI +
Sbjct: 128 LQKHFLKFGQI---------------------EKIRIVRDKFNNNKSKGYGFIVFHDPIS 166
Query: 213 MKAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
K A K+ G +++GR +VD+ER RTV +RPRRL
Sbjct: 167 SKMACKEIGVHRGLEINGRICIVDIERSRTVKYFRPRRL 205
>gi|224133078|ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|222837365|gb|EEE75744.1| predicted protein [Populus trichocarpa]
Length = 317
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/158 (37%), Positives = 81/158 (51%), Gaps = 25/158 (15%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP GDPY T+FV RLS+ TTE +++ YG +K L
Sbjct: 47 YDPFGDPKAIGDPYCTIFVGRLSHLTTEDTLRKAMSKYGKVKNL---------------- 90
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T RGYAF+E+ R+M+ AYK +D ++VD R + +P W
Sbjct: 91 -----RLVRHIVTGASRGYAFVEFETEREMRRAYKDGQHSYIDDSEIIVDYNRQQLMPGW 145
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSA 281
PRRLGGGLG + G+ R+ GRE+ P R P ++
Sbjct: 146 IPRRLGGGLGGRKESGQ---LRFGGRER-PFRAPLQTI 179
>gi|402888045|ref|XP_003907387.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Papio anubis]
Length = 254
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREAKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + L +D R+RD RD+R
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRLWPDNDWERERDFRDER 235
>gi|395846781|ref|XP_003796072.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Otolemur garnettii]
Length = 246
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/254 (37%), Positives = 123/254 (48%), Gaps = 43/254 (16%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D + RE
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLY--------RE 178
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 360
R+R RPRDRDH R R ++R R + ER+RD DR +
Sbjct: 179 GKRERRERSRSRERHWDSRPRDRDHDRGREKRWQEREPPRMWPEN-DWERERDFREDRLK 237
Query: 361 GRDRGRDHERDREK 374
GR++ RDR K
Sbjct: 238 GREK-----RDRSK 246
>gi|31077198|ref|NP_851030.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform b
[Homo sapiens]
gi|441630253|ref|XP_004089520.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|52790429|gb|AAH09622.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|55249546|gb|AAH47678.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|62739916|gb|AAH93671.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|85567339|gb|AAI11956.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|312150806|gb|ADQ31915.1| U11/U12 snRNP 35K [synthetic construct]
Length = 251
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 85
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 86 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 137
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 138 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 191
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 192 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 240
>gi|13027642|ref|NP_073208.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein isoform a
[Homo sapiens]
gi|297693357|ref|XP_002823986.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pongo abelii]
gi|332254325|ref|XP_003276277.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Nomascus leucogenys]
gi|395745035|ref|XP_003778201.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pongo abelii]
gi|441630256|ref|XP_004089521.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Nomascus leucogenys]
gi|74754517|sp|Q16560.1|U1SBP_HUMAN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein;
Short=U11/U12-35K; AltName: Full=Protein HM-1; AltName:
Full=U1 snRNP-binding protein homolog
gi|1174217|gb|AAA86654.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|1174219|gb|AAA86655.1| U1-snRNP binding protein homolog [Homo sapiens]
gi|32450706|gb|AAH54034.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Homo sapiens]
gi|48427632|tpg|DAA05495.1| TPA_exp: U11/U12 snRNP 35K [Homo sapiens]
gi|119618818|gb|EAW98412.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|119618820|gb|EAW98414.1| U11/U12 snRNP 35K, isoform CRA_a [Homo sapiens]
gi|158261277|dbj|BAF82816.1| unnamed protein product [Homo sapiens]
Length = 246
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|395745038|ref|XP_002823985.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Pongo abelii]
Length = 251
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|426374580|ref|XP_004054148.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Gorilla gorilla gorilla]
Length = 251
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 85
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 86 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 137
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 138 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 191
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 192 SRSRERHWDSRARDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 240
>gi|426374578|ref|XP_004054147.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Gorilla gorilla gorilla]
Length = 246
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRARDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|426374582|ref|XP_004054149.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 3 [Gorilla gorilla gorilla]
Length = 251
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/229 (38%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRARDRDHDRGREKRWQEREPTRVWPDNDWERERDFRDDR 235
>gi|293333112|ref|NP_001169404.1| hypothetical protein [Zea mays]
gi|224029143|gb|ACN33647.1| unknown [Zea mays]
gi|414886248|tpg|DAA62262.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/210 (31%), Positives = 100/210 (47%), Gaps = 33/210 (15%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G + +A+ P+ A ++ + A + L + YDP D
Sbjct: 1 MSGGSVSAVFYADKYHPIQAGSIDGTDVAPHDNAVLRALICSQAG--------LYDPFGD 52
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P SGDP++T+FV RLS +T + +++ YG +K + R
Sbjct: 53 PKASGDPHRTVFVGRLSRQTDDDTLRKAMSRYGRVKSM---------------------R 91
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
LV D T RGYAF+EY R+M AY+ A ++G V+VD R + +P W PRRLG
Sbjct: 92 LVRDIVTGASRGYAFVEYETDREMHRAYEDAHHSVIEGSEVIVDYYRQQLMPGWIPRRLG 151
Query: 250 GGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
GGLG + G+ R+ GRE+ P R P R
Sbjct: 152 GGLGGMKESGQ---LRFGGRER-PFRAPLR 177
>gi|171686398|ref|XP_001908140.1| hypothetical protein [Podospora anserina S mat+]
gi|170943160|emb|CAP68813.1| unnamed protein product [Podospora anserina S mat+]
Length = 216
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 99/205 (48%), Gaps = 37/205 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
L NLL LF PR PL + PP PE+RK ++G+A F+ E + Y P E+
Sbjct: 5 LPPNLLALFTPRPPLRWVPPCDKAPEQRKTATISGVADFLPAMEEYKEIPYTP----TES 60
Query: 98 PVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKRE 157
+E R R + + E + E Y P+ DPN+ GD +KTL VARL Y E ++RE
Sbjct: 61 WLEARDRKQREKKEALEKLLTEGPLNYKPNEDPNIRGDAFKTLIVARLDYNADEKDLERE 120
Query: 158 FESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD-----KETNKP---RGYAFIEYMH 209
F +GPI+R +++R+V D K KP RGYAF+ Y
Sbjct: 121 FGRFGPIER------------------SKQIRIVRDTHAHEKPNKKPKPHRGYAFVVYER 162
Query: 210 TRDMK--AAYKQADGRKLDGRRVLV 232
+DM+ A+ Q RRVLV
Sbjct: 163 EKDMRGNIAHIQTILHH-HVRRVLV 186
>gi|291414264|ref|XP_002723378.1| PREDICTED: small nuclear ribonucleoprotein 35kDa (U11/U12)
[Oryctolagus cuniculus]
Length = 246
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/244 (36%), Positives = 119/244 (48%), Gaps = 38/244 (15%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAF+EY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFVEYKEERALLRAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGGLG + G+ R+ GR++ P R P P ++ + + RE
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNELY--------RE 178
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 360
R+R R RDR+H R R +DR + R D ER+RD DR R
Sbjct: 179 GKRERRERSRSRERHWDSRARDREHGRGREKRWQDREQARAWP-DSDWERERDLREDRAR 237
Query: 361 GRDR 364
G++R
Sbjct: 238 GKER 241
>gi|30689357|ref|NP_850395.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
gi|18252907|gb|AAL62380.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|21389635|gb|AAM48016.1| putative U1 small nuclear ribonucleoprotein 70 kDa [Arabidopsis
thaliana]
gi|330255163|gb|AEC10257.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Arabidopsis
thaliana]
Length = 333
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/156 (39%), Positives = 79/156 (50%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP D GDPY TLFV RLS+ TTE ++ YG IK L
Sbjct: 50 YDPSGDSKAVGDPYCTLFVGRLSHHTTEDTLREVMSKYGRIKNL---------------- 93
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV T RGY F+EY ++M AY+ A +DGR ++VD R + +P W
Sbjct: 94 -----RLVRHIVTGASRGYGFVEYETEKEMLRAYEDAHHSLIDGREIIVDYNRQQLMPGW 148
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGGLG + G+ R+ GR++ P R P R
Sbjct: 149 IPRRLGGGLGGRKESGQ---LRFGGRDR-PFRAPLR 180
>gi|255710741|ref|XP_002551654.1| KLTH0A04554p [Lachancea thermotolerans]
gi|238933031|emb|CAR21212.1| KLTH0A04554p [Lachancea thermotolerans CBS 6340]
Length = 278
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 97/215 (45%), Gaps = 63/215 (29%)
Query: 70 LTGMAQFVSHFAEPGDPL-YAPPVEKAETPVERRARIHKLRLEKG--------------- 113
+ Q VS PG PL Y PV+ PVE R +K++ G
Sbjct: 1 MIKFPQNVSKLFRPGPPLQYKKPVD---YPVEERKTANKIQSLSGYLGALDTYRSEHPEG 57
Query: 114 -------AEKAAE------------ELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESK 153
A AAE +L ++P DPN++ DPY+T+FV RL + TE +
Sbjct: 58 SENGHLDAYNAAENARQVEAKALNAKLAIWNPDEDPNIADSDPYRTIFVGRLPFAVTEVE 117
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
+++EF +G I EKVR+V DK +NK RGY FI +
Sbjct: 118 LQKEFVRFGEI---------------------EKVRVVRDKTSNKSRGYGFIMFKDEISA 156
Query: 214 KAAYKQAD---GRKLDGRRVLVDVERGRTVPNWRP 245
++A ++ G ++ GR V+VD+ERGRTV + P
Sbjct: 157 RSACREIGVHRGVQIGGRPVIVDIERGRTVKYFTP 191
>gi|432094892|gb|ELK26300.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Myotis
davidii]
Length = 246
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/170 (40%), Positives = 89/170 (52%), Gaps = 29/170 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LAQYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLLRAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRH 290
W PRRLGGGLG + G+ R+ GR++ P R P P I+ D++
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVIKSDQY 176
>gi|390595574|gb|EIN04979.1| hypothetical protein PUNSTDRAFT_55288 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 170
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/189 (39%), Positives = 92/189 (48%), Gaps = 42/189 (22%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEK----RKCPPLTGMAQFVSHFAEPGDPLYAPP----VE 93
L NLLKLF+PR PL Y P ++ + + G+A +S E + L A +E
Sbjct: 7 LPPNLLKLFQPRPPLPYARPVDRDIDRVRSKHVDGVAALLSRLQE--ESLNAQNEGKDLE 64
Query: 94 KAETPVERRARIHK---LRLEKGAEK-----AAEELKKYDPHNDPNVSGDPYKTLFVARL 145
+ E P A K LR EK K AA+E Y P DP GDPYKTLF+ARL
Sbjct: 65 EGEEPTFTHAEEVKRQILREEKKKAKTDEFKAAKE--SYKPQEDPEAVGDPYKTLFIARL 122
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
TES ++REFESYG I E+VR+V DK + RGYAFI
Sbjct: 123 HKSATESDLRREFESYGTI---------------------ERVRIVRDK-NGRSRGYAFI 160
Query: 206 EYMHTRDMK 214
Y RDMK
Sbjct: 161 VYERERDMK 169
>gi|367005232|ref|XP_003687348.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
gi|357525652|emb|CCE64914.1| hypothetical protein TPHA_0J00920 [Tetrapisispora phaffii CBS 4417]
Length = 309
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/219 (31%), Positives = 106/219 (48%), Gaps = 32/219 (14%)
Query: 46 LLKLFEPRAPLEYKP----PPEKRKCPP-LTGMAQF-----VSHFAEPGDPLYAPPVEKA 95
+ +LF+P PL++ P KRK P ++G+ Q +S + + E
Sbjct: 12 VARLFKPNPPLKFLKGIDYPMHKRKTNPNISGITQIQNDRSISSIFNEYNIQFPKGSENG 71
Query: 96 ETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKI 154
V + K++ + E +L +DP+NDPN+ + DPY+T+FV RL Y+ E +
Sbjct: 72 HLKVYNEVKNQKIKEKNSIE---SKLSAWDPNNDPNIINTDPYRTIFVGRLPYDIDEISL 128
Query: 155 KREFESYGPIK--RLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRD 212
++ F YG I+ R+I NS G P K RGY FI + T
Sbjct: 129 QKIFIKYGQIEKVRIIRNS--HGKKENSNTPT-----------VGKSRGYGFIVFEDTYS 175
Query: 213 MKAAYKQA---DGRKLDGRRVLVDVERGRTVPNWRPRRL 248
K A+K G +++GR +VD+ERGRTV ++PRRL
Sbjct: 176 SKMAFKDIGTHKGIEINGRTCIVDIERGRTVRYFKPRRL 214
>gi|332840730|ref|XP_001169924.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Pan troglodytes]
Length = 251
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 85
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 86 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 137
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 138 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 191
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + ++ R+RD RDDR
Sbjct: 192 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNEWERERDFRDDR 240
>gi|426247194|ref|XP_004017371.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Ovis aries]
Length = 245
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 110/228 (48%), Gaps = 48/228 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRER 186
Query: 290 ------HGDRDRERSRERGRD-REREREKSLELSH-DRPRDRDHRDDR 329
H D +RGR+ R +ERE + D R+RD RDDR
Sbjct: 187 SRSRERHWDSRMRDHHDRGREKRWQEREAARAWPEGDWERERDFRDDR 234
>gi|50305197|ref|XP_452557.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641690|emb|CAH01408.1| KLLA0C08019p [Kluyveromyces lactis]
Length = 301
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/220 (30%), Positives = 105/220 (47%), Gaps = 48/220 (21%)
Query: 40 TGLTANLLKLFEPRAPLEYKPPPEKR------KCPPLTGMAQFVSHFAEPGDPLYAPPVE 93
T L +++ KLF PL PP R K LTG++ + H +E +
Sbjct: 18 TKLPSSVSKLFTQGPPL---PPSRVRVRRNQNKKYALTGVSAVLQHVSE---------YK 65
Query: 94 KAETPVE--RRARIHKLRLEKGAEKAAEELKK---YDPHNDPNVSGDPYKTLFVARLSYE 148
KA PV + +++ + + ++ E +KK + P +D N+S DPY+TLFV RL Y
Sbjct: 66 KATHPVSENQHLKVYDEAMNESHKEQEELMKKIQEWHPESDANISSDPYRTLFVGRLHYA 125
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
E ++++ F YG I E R+V D++ K RGY F+++
Sbjct: 126 VDEVELQKSFVKYGDI---------------------ESCRIVRDQD-GKSRGYGFVQFT 163
Query: 209 HTRDMKAAYKQADGRK---LDGRRVLVDVERGRTVPNWRP 245
D K +++ RK + GR +VD+ERGRTV ++P
Sbjct: 164 SYEDSKQCFRELGVRKGIEIMGRTSIVDIERGRTVKFFKP 203
>gi|410047484|ref|XP_003952396.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan troglodytes]
Length = 246
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + ++ R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNEWERERDFRDDR 235
>gi|397481850|ref|XP_003812150.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Pan paniscus]
Length = 307
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 141
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 142 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 193
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 194 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 247
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + ++ R+RD RDDR
Sbjct: 248 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNEWERERDFRDDR 296
>gi|114647660|ref|XP_509463.2| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 4 [Pan troglodytes]
Length = 307
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 115/229 (50%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 97 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 141
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 142 --------RLVRDLVTGFSKGYAFIEYKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 193
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 194 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 247
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + + ++ R+RD RDDR
Sbjct: 248 SRSRERHWDSRTRDRDHDRGREKRWQEREPTRVWPDNEWERERDFRDDR 296
>gi|355721016|gb|AES07125.1| small nuclear ribonucleoprotein 35kDa [Mustela putorius furo]
Length = 245
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/170 (39%), Positives = 89/170 (52%), Gaps = 29/170 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERSLIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRH 290
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D++
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PIVKNDQY 176
>gi|440898320|gb|ELR49845.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein, partial
[Bos grunniens mutus]
Length = 246
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 110/228 (48%), Gaps = 48/228 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 37 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 81
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 82 --------RLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTL 133
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 134 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRER 187
Query: 290 ------HGDRDRERSRERGRD-REREREKSLELSH-DRPRDRDHRDDR 329
H D +RGR+ R +ERE + D R+RD RDDR
Sbjct: 188 SRSRERHWDSRMRDHHDRGREKRWQEREPARAWPEGDWERERDFRDDR 235
>gi|154305179|ref|XP_001552992.1| hypothetical protein BC1G_08884 [Botryotinia fuckeliana B05.10]
Length = 208
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 48/191 (25%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFV---SHFAEPGDPLYAPPVEK 94
L NLL LF PR PL + PP PE RK ++G+A F+ + E D Y P
Sbjct: 5 LPPNLLALFAPRPPLRWVPPSDFAPEDRKTANISGLAAFLPALQEYKETDD--YQP---- 58
Query: 95 AETPVERRARIHKLRLEKGA--EKAAEELKK-YDPHNDPNVSGDPYKTLFVARLSYETTE 151
E+ ++R+ R+ +LEK A E +E K + P DPN+ GD +KTL V+RL Y+ TE
Sbjct: 59 TESWLQRKDRV---KLEKKATHENIIQEAPKLFKPSEDPNIRGDAFKTLIVSRLDYDATE 115
Query: 152 SKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTD--------KETNKPRGYA 203
++REF +GPI E++R+V D K+ K RGYA
Sbjct: 116 KDLEREFGRFGPI---------------------ERIRIVVDTHQHEKPGKKVKKHRGYA 154
Query: 204 FIEYMHTRDMK 214
F+ + +DM+
Sbjct: 155 FVVFEREKDMR 165
>gi|403292252|ref|XP_003937167.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Saimiri boliviensis boliviensis]
Length = 247
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 112/230 (48%), Gaps = 50/230 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIE+ R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG--------- 291
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D +
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYNREGKRERRE 186
Query: 292 ----------DRDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
R R+R +RGR+ R +ERE + +D R+RD RDDR
Sbjct: 187 RSRSRERHWDSRTRDRDHDRGREKRWQEREPPRVWPENDWERERDFRDDR 236
>gi|403292250|ref|XP_003937166.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Saimiri boliviensis boliviensis]
Length = 252
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 112/230 (48%), Gaps = 50/230 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 85
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIE+ R + AY+ ADG +D + VD E RT+
Sbjct: 86 --------RLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 137
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHG--------- 291
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D +
Sbjct: 138 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYNREGKRERRE 191
Query: 292 ----------DRDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
R R+R +RGR+ R +ERE + +D R+RD RDDR
Sbjct: 192 RSRSRERHWDSRTRDRDHDRGREKRWQEREPPRVWPENDWERERDFRDDR 241
>gi|115495605|ref|NP_001069024.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Bos taurus]
gi|122144781|sp|Q1LZH0.1|U1SBP_BOVIN RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|94534832|gb|AAI16003.1| Small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
gi|296478494|tpg|DAA20609.1| TPA: small nuclear ribonucleoprotein 35kDa (U11/U12) [Bos taurus]
Length = 245
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 110/228 (48%), Gaps = 48/228 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYTPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKDERSLLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDR----------- 289
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D+
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDQFREGKRERRER 186
Query: 290 ------HGDRDRERSRERGRD-REREREKSLELSH-DRPRDRDHRDDR 329
H D +RGR+ R +ERE + D R+RD RDDR
Sbjct: 187 SRSRERHWDSRMRDHHDRGREKRWQEREPARAWPEGDWERERDFRDDR 234
>gi|348554281|ref|XP_003462954.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cavia porcellus]
Length = 246
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 93/248 (37%), Positives = 123/248 (49%), Gaps = 49/248 (19%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K++ F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + A++ ADG +D V VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALLKAHRDADGLLIDQHEVFVDFELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED--RHGDRDRERS 298
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D R G R+R
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PAVKSDLYREGKRERRER 186
Query: 299 ----------RERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR 348
R R RD +R REK R +DR+ D DR RD +R +GR
Sbjct: 187 SRSRERHWDFRARDRDHDRGREK-------RWQDREQARAWPDGDWDRERDLREDRLKGR 239
Query: 349 ERDRDRTR 356
E+ RDR++
Sbjct: 240 EK-RDRSK 246
>gi|324508872|gb|ADY43741.1| U1 small nuclear ribonucleoprotein 70 kDa [Ascaris suum]
Length = 121
Score = 82.8 bits (203), Expect = 4e-13, Method: Composition-based stats.
Identities = 60/144 (41%), Positives = 80/144 (55%), Gaps = 25/144 (17%)
Query: 70 LTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHND 129
++G+A++V F +P D PP ET ERRAR K + E A K + + + P +
Sbjct: 1 MSGLAEYVHLFEDPKD---TPPKPIFETKEERRARRRKEKEELLAYKIEQGIATWAPAEN 57
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P + DPYKTLFVAR++YET+ESK++REFE +G I +LI
Sbjct: 58 PTATTDPYKTLFVARINYETSESKLRREFEQFGKITKLI--------------------- 96
Query: 190 LVTDKETNKPRGYAFIEYMHTRDM 213
LV D KPRGYAFIEY H +M
Sbjct: 97 LVHDP-NGKPRGYAFIEYQHKENM 119
>gi|296213228|ref|XP_002753186.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 2 [Callithrix jacchus]
gi|390468332|ref|XP_003733920.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Callithrix jacchus]
Length = 246
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 113/229 (49%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFV RL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIE+ R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + +D R+RD RDDR
Sbjct: 187 SRSRERHWDSRTRDRDHDRGREKRWQERELPRVWPENDWERERDFRDDR 235
>gi|296213226|ref|XP_002753185.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
isoform 1 [Callithrix jacchus]
Length = 251
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 113/229 (49%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFV RL+ +T E K+K F YG I+RL
Sbjct: 41 LARYVPNK--GVIGDPLLTLFVTRLNLQTKEDKLKEVFSRYGDIRRL------------- 85
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIE+ R + AY+ ADG +D + VD E RT+
Sbjct: 86 --------RLVRDLVTGFSKGYAFIEFKEERAVIKAYRDADGLVIDQHEIFVDYELERTL 137
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 138 KGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGKRERRER 191
Query: 289 -----RHGD-RDRERSRERGRD-REREREKS-LELSHDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + +D R+RD RDDR
Sbjct: 192 SRSRERHWDSRTRDRDHDRGREKRWQERELPRVWPENDWERERDFRDDR 240
>gi|351698560|gb|EHB01479.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Heterocephalus glaber]
Length = 246
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 87/229 (37%), Positives = 114/229 (49%), Gaps = 49/229 (21%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K++ F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEDKLREVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D V VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVVDQHEVFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRED------------ 288
W PRRLGGGLG + G+ R+ GR++ P R P P ++ D
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINL--PVVKNDLYREGRRERRER 186
Query: 289 -----RHGD-RDRERSRERGRD-REREREKSLELS-HDRPRDRDHRDDR 329
RH D R R+R +RGR+ R +ERE + D R+RD R+DR
Sbjct: 187 SRSRERHWDFRTRDRDHDRGREKRWQERELARAWPDSDWDRERDLREDR 235
>gi|444724897|gb|ELW65483.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Tupaia
chinensis]
Length = 246
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 96/259 (37%), Positives = 119/259 (45%), Gaps = 53/259 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYAPNK--GVIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALIKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRE 300
W PRRLGGGLG + G+ R+ GR++ R P P ++ D +
Sbjct: 133 KGWIPRRLGGGLGGKKESGQ---LRFGGRDRH-FRKPINL--PVVKNDLY---------- 176
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRDR---ERERDRGR-ERDRDRT 355
RE E H D R RD DR R+R ERE +R E D DR
Sbjct: 177 --------REGKRERREPSRSRERHWDSRTRERDHDRGRERRWQEREPNRAWPESDWDRE 228
Query: 356 RDRDRGRDRGRDHERDREK 374
RD R RGRD +DR K
Sbjct: 229 RDFREDRSRGRDR-KDRSK 246
>gi|344302784|gb|EGW33058.1| hypothetical protein SPAPADRAFT_60375 [Spathaspora passalidarum
NRRL Y-27907]
Length = 302
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 91/218 (41%), Gaps = 44/218 (20%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVE 100
N+ KLF P+ P Y PP PE+R + ++ H + + P T +
Sbjct: 10 NIQKLFGPKPPFLYIPPTDYPPEQRSTTAIAPISSIKDHISSYITQYKSEPKPTTSTTI- 68
Query: 101 RRARIHKLRLEKG--AEKAAEELKKYDPHNDPNVSG--------DPYKTLFVARLSYETT 150
+ + R +K E +L ++ NDP + DPY+T+F+ARL Y T
Sbjct: 69 --STVEAFRQKKQRHQESFTRQLAQW---NDPELFAKNEREFMKDPYRTVFIARLDYSVT 123
Query: 151 ESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHT 210
E I F YG I E +R++ DK K RGY FI + T
Sbjct: 124 ELDISSAFSKYGVI---------------------ESIRIIRDKN-GKSRGYGFIVFERT 161
Query: 211 RDMKAAYKQA--DGRKLDGRRVLVDVERGRTVPNWRPR 246
D K + G L R LVD ERGR + NW+PR
Sbjct: 162 NDAKNCVNELCRSGILLKNRHALVDFERGRIIRNWKPR 199
>gi|21624627|ref|NP_083808.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Mus
musculus]
gi|81916986|sp|Q9D384.1|U1SBP_MOUSE RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|12857850|dbj|BAB31127.1| unnamed protein product [Mus musculus]
gi|27695288|gb|AAH43031.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|34849818|gb|AAH58361.1| Small nuclear ribonucleoprotein 35 (U11/U12) [Mus musculus]
gi|148687639|gb|EDL19586.1| RIKEN cDNA 6330548G22 [Mus musculus]
Length = 244
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 85/166 (51%), Gaps = 29/166 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGRE---QEPSRGPSRSAEP 283
W PRRLGGGLG + G+ R+ GR+ ++P P EP
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDRPFRKPINLPVVKNEP 175
>gi|149063260|gb|EDM13583.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
gi|149063261|gb|EDM13584.1| similar to RIKEN cDNA 6330548G22, isoform CRA_a [Rattus norvegicus]
Length = 244
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 85/166 (51%), Gaps = 29/166 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGRE---QEPSRGPSRSAEP 283
W PRRLGGGLG + G+ R+ GR+ ++P P EP
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDRPFRKPINLPVVKNEP 175
>gi|62078981|ref|NP_001014149.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Rattus
norvegicus]
gi|81910233|sp|Q5U1W5.1|U1SBP_RAT RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|55562850|gb|AAH86435.1| U11/U12 snRNP 35K [Rattus norvegicus]
Length = 244
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/166 (39%), Positives = 85/166 (51%), Gaps = 29/166 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNSQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGRE---QEPSRGPSRSAEP 283
W PRRLGGGLG + G+ R+ GR+ ++P P EP
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDRPFRKPINLPVVKNEP 175
>gi|354496379|ref|XP_003510304.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cricetulus griseus]
gi|344258842|gb|EGW14946.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Cricetulus
griseus]
Length = 246
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/208 (38%), Positives = 104/208 (50%), Gaps = 42/208 (20%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALLKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGRE---QEPSRGPSRSAEP-----------RIR 286
W PRRLGGGLG + G+ R+ GR+ ++P P EP
Sbjct: 133 RGWIPRRLGGGLGGKKESGQ---LRFGGRDRPFRKPINLPVVKNEPHREGKRERRERSRS 189
Query: 287 EDRHGD-RDRERSRERGRD-REREREKS 312
DRH D R RER+ +RG + R +ERE +
Sbjct: 190 RDRHWDPRPRERNHDRGLEKRWQEREMA 217
>gi|123407390|ref|XP_001303000.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121884341|gb|EAX90070.1| hypothetical protein TVAG_371310 [Trichomonas vaginalis G3]
Length = 262
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 105/214 (49%), Gaps = 34/214 (15%)
Query: 38 HPTGLTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-KAE 96
P + +++LF R L++ PEK + LTG++ V F + D PP+E +
Sbjct: 1 MPPKFSEEIIQLFRARPKLKFLELPEKPQPQQLTGISS-VLPFIKRED---LPPLESEPL 56
Query: 97 TPVERRARIH-KLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIK 155
P++++ + K + E+ +K AE ++Y+P + +G+ TLFV+ L E TE +I
Sbjct: 57 LPIDQKHLVRRKQKNEENNQKIAEMKQRYNPRANKACTGNANNTLFVSGLPKEVTEQEIV 116
Query: 156 REFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKA 215
EF +G +K V LV D +TN+ R Y F+EY + +A
Sbjct: 117 YEFNPFGRVK---------------------TVNLVRDPKTNEQRSYCFVEY----ETEA 151
Query: 216 AYKQADGRK---LDGRRVLVDVERGRTVPNWRPR 246
++ A K + +LVD ER RT+PNW PR
Sbjct: 152 GFRNALNHKDKFFIKKPLLVDFERARTIPNWIPR 185
>gi|26333021|dbj|BAC30228.1| unnamed protein product [Mus musculus]
Length = 179
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 66/128 (51%), Gaps = 23/128 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP TLFVARL+ +T E K+K F YG I+RL
Sbjct: 36 LARYVPNK--GVTGDPLLTLFVARLNLQTKEEKLKEVFSRYGDIRRL------------- 80
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
RLV D T +GYAFIEY R + AY+ ADG +D + VD E RT+
Sbjct: 81 --------RLVRDLVTGFSKGYAFIEYKEERALMKAYRDADGLVIDQHEIFVDYELERTL 132
Query: 241 PNWRPRRL 248
W PRRL
Sbjct: 133 RGWIPRRL 140
>gi|346465439|gb|AEO32564.1| hypothetical protein [Amblyomma maculatum]
Length = 327
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 110/255 (43%), Gaps = 46/255 (18%)
Query: 113 GAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSC 172
G +A E K H V DP T+FVARLS T E I+ YG IK +C
Sbjct: 78 GIVRAMEATYKTSKH----VKTDPRVTVFVARLSPATNEDTIREXXXQYGDIK-----NC 128
Query: 173 NGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 232
+ LV D T + YAFIE+ T+D AA A+ +D ++ V
Sbjct: 129 H----------------LVRDVVTGFSKRYAFIEFYDTKDALAACG-ANQLAIDDCKIFV 171
Query: 233 DVERGRTVPNWRPRRLGGGL------GTTRVGGEEVNQRYSGREQEPSRGPS--RSAEPR 284
D E+ R +P W PRRLGGG G R GG + R GPS RS EP
Sbjct: 172 DFEQERVLPGWIPRRLGGGFGGKKESGQLRFGGLDRPFRKPIVLGSSKTGPSDFRSWEPG 231
Query: 285 IREDRHGDRDRERS-------RERGRDREREREKSLELSHDRPRDR---DHRDDRHHRDR 334
++ R R R DR+ E + LS++R R+R DHR+DR +R
Sbjct: 232 APVPSKNNQLPRRHEGHCSDYRARDHDRKDEFLRQKRLSYERSRERHKVDHRNDR--PER 289
Query: 335 DRTRDRERERDRGRE 349
R E DR R+
Sbjct: 290 PYGRPHESSSDRWRQ 304
>gi|294658365|ref|XP_460701.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
gi|202953076|emb|CAG89041.2| DEHA2F07854p [Debaryomyces hansenii CBS767]
Length = 334
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 45/226 (19%)
Query: 44 ANLLKLFEPRAPLEYKPP---PEKRKCPP-LTGMAQFVSHFAEPGDPLY------APPVE 93
N+ KLF + PL YK P P + +C +T ++ F + + + D L PP+E
Sbjct: 10 INIQKLFAVKPPLVYKTPLDYPAESRCTNHITSVSSFRNQWQQYVDDLVEAEKNQPPPIE 69
Query: 94 KAETPVERRARIHKLRLEKGAEKAAEELKKYDPH----NDPNVSGDPYKTLFVARLSYET 149
+ R K L+K + E DP N+ DP+KT+F++RL Y
Sbjct: 70 TIQQVQIREKGRKKQELQKSYQLQLNEWN--DPELLQKNEQEFMKDPFKTVFISRLDYLL 127
Query: 150 TESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMH 209
TE I + F YG I E + +V DK++ K RGY F+ +
Sbjct: 128 TELDISKNFSKYGVI---------------------ESITIVRDKKSGKSRGYGFVVFER 166
Query: 210 TRDMKAAYKQA--DGRKLD------GRRVLVDVERGRTVPNWRPRR 247
D K K+ G K+ R +LVD+ERGR V NW+PRR
Sbjct: 167 DEDAKGCIKELAPTGLKIPVENKPFTRTILVDMERGRLVRNWKPRR 212
>gi|401625267|gb|EJS43283.1| snp1p [Saccharomyces arboricola H-6]
Length = 300
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 105/217 (48%), Gaps = 47/217 (21%)
Query: 48 KLFEPRAPLEYKPP-----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERR 102
KLF + PL YK P +++ P +TG+A +S+ + + E E
Sbjct: 14 KLFRAKPPLPYKKPTDYPYAKRQTNPNITGVANLLSNSLK----------QYIEEFPEGT 63
Query: 103 ARIHKLRLE-------KGAEKAAEELKKYDPHNDPNVS-GDPYKTLFVARLSYETTESKI 154
A H + E K ++ L+ ++P+ DP++ DPY+T+F+ RL Y E ++
Sbjct: 64 ANNHLQKYEDVKSSKIKNSQLIDRRLQSWNPNVDPHIKDTDPYRTIFIGRLPYNINEIEL 123
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
++ F +G I +K+R+V D+ T + +GYAFI + K
Sbjct: 124 QKHFVRFGEI---------------------QKIRIVKDRTTQQSKGYAFIVFKDPISSK 162
Query: 215 AAYKQAD---GRKLDGRRVLVDVERGRTVPNWRPRRL 248
A+K+ G +++ R +VD+ERGRTV ++PRRL
Sbjct: 163 MAFKEIGVHRGIQIEDRICIVDIERGRTVKYFKPRRL 199
>gi|47227145|emb|CAG00507.1| unnamed protein product [Tetraodon nigroviridis]
Length = 214
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 27/165 (16%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
+Y P+ V GDP TLFV+RL+ +TTE K+ F YG I+RL
Sbjct: 38 RYKPNK--GVVGDPLLTLFVSRLNPQTTEDKLYEVFSKYGDIRRL--------------- 80
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
RLV D T + YAF+EY R + A + A+ +D V VD E+ RT+
Sbjct: 81 ------RLVRDIVTGFSKRYAFVEYKEERSVVRARRDANKIVVDQHEVFVDFEQERTLKG 134
Query: 243 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE 287
W PRRLGGG G + G+ R+ GR++ P R P ++E
Sbjct: 135 WVPRRLGGGHGGKKESGQ---LRFGGRDR-PFRKPINLGLGLMQE 175
>gi|260942821|ref|XP_002615709.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
gi|238850999|gb|EEQ40463.1| hypothetical protein CLUG_04591 [Clavispora lusitaniae ATCC 42720]
Length = 361
Score = 78.2 bits (191), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 48 KLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERR- 102
KLF P+ P +K P P +R P +T ++ + S + + E+ + P+ ++
Sbjct: 29 KLFTPKLPFLHKQPIDYPPHERATPVITSISAWKSEIEKYCTEFKSSDEEQKQRPLTKKQ 88
Query: 103 ARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYG 162
R L+ + + AE K D DPYKT+FVARL Y TE + + F YG
Sbjct: 89 LREASLKRQMDDWEDAEAFAKND------FLKDPYKTVFVARLYYSLTELDLSKHFTKYG 142
Query: 163 PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD- 221
I E +R++ + ET + RGY FI + D K ++
Sbjct: 143 TI---------------------ESIRIIRNTETGQSRGYGFIVFEREADAKNCIRELSP 181
Query: 222 -GRKLDG-------RRVLVDVERGRTVPNWRPRR 247
G +D R++LVD+ERGR V NWRPRR
Sbjct: 182 TGLSIDPPSSESKPRKILVDMERGRLVRNWRPRR 215
>gi|355721025|gb|AES07128.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 144
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCP-------PLTGMAQFVSHFAEPGDPLYAPPVEK 94
L NLL LF PR P+ Y PP EK P P G+A ++ F +P D APP +
Sbjct: 30 LPPNLLALFAPRDPIPYLPPLEK--LPHEKHHNQPYCGIAPYIREFEDPRD---APPPTR 84
Query: 95 AETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
AET ER R + ++E+ ++ ELK +DPHNDPN GD +KTLFVAR++Y+TTESK+
Sbjct: 85 AETREERMERKRREKIERRQQEVETELKMWDPHNDPNAQGDAFKTLFVARVNYDTTESKL 144
>gi|147903467|ref|NP_001090410.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Xenopus
laevis]
gi|123905237|sp|Q05AT9.1|U1SBP_XENLA RecName: Full=U11/U12 small nuclear ribonucleoprotein 35 kDa
protein; Short=U11/U12 snRNP 35 kDa protein; AltName:
Full=U1 snRNP-binding protein homolog
gi|116063426|gb|AAI23362.1| MGC154877 protein [Xenopus laevis]
Length = 272
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/157 (38%), Positives = 81/157 (51%), Gaps = 27/157 (17%)
Query: 121 LKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRD 180
L +Y P+ V+GDP+ TLFV+RLS +TTE K+K F YG IKR
Sbjct: 36 LSRYVPNK--GVTGDPHLTLFVSRLSPQTTEEKLKEVFSRYGDIKR-------------- 79
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
+RLV D T +GYAFIEY + A++ A+ +D R V VD E R +
Sbjct: 80 -------IRLVRDFITGFSKGYAFIEYKQENAIMKAHRDANKLVIDQREVFVDFELERNL 132
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
W PRR GGG G + G+ R+ GR++ P R P
Sbjct: 133 KGWIPRRFGGGFGGKKESGQ---LRFGGRDR-PFRKP 165
>gi|241671842|ref|XP_002411425.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
gi|215504074|gb|EEC13568.1| U1 small nuclear ribonucleoprotein, putative [Ixodes scapularis]
Length = 278
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 108/251 (43%), Gaps = 53/251 (21%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLV 191
+ DP TLFV RL+ T+E +++ F YG ++ SC RLV
Sbjct: 48 IKTDPKLTLFVGRLNPTTSEERLREFFAHYGEVR-----SC----------------RLV 86
Query: 192 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGG 251
D T + YAF+EY RD AA A+ +D R+ VD ER R +P W PRRLGGG
Sbjct: 87 RDIITGFSKCYAFVEYYELRDALAA-NDANQEYIDDYRIFVDFERERVLPGWVPRRLGGG 145
Query: 252 LGTTRVGGEEVNQRYSGRE---QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERE 308
G + G+ R+ GR+ ++P +R P R R S G
Sbjct: 146 FGGKKESGQ---LRFGGRDRPFKKPIVVNNRQGAPFPRSVDFSSAPRGYSGGYG------ 196
Query: 309 REKSLELSHDRPRDRDHRDDRHHRDRD----RTRDRERERDRGRERDRDRTRDRDRGRDR 364
+R RD D R D H DR R + E ER RGR+ + DR GR
Sbjct: 197 ---------NRGRDPD-RPDHSHGDRKDEFLRRKRMEYERSRGRQDE-----DRSDGRQE 241
Query: 365 GRDHERDREKD 375
R + RE D
Sbjct: 242 RRPQWQQREGD 252
>gi|357154271|ref|XP_003576727.1| PREDICTED: uncharacterized protein LOC100823301 [Brachypodium
distachyon]
Length = 416
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/156 (37%), Positives = 80/156 (51%), Gaps = 25/156 (16%)
Query: 124 YDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKP 183
YDP DP +G+PY +FV LS T + +++ YG +K +
Sbjct: 50 YDPFGDPKATGEPYHMVFVGHLSRFTGDETLRKAMSRYGRVKSM---------------- 93
Query: 184 CDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
RLV D T RGYAF+EY ++M+ AY+ A +DG V+VD R + +P W
Sbjct: 94 -----RLVRDIVTGASRGYAFVEYETDKEMRRAYEDAHHSIIDGSEVIVDYYRQQLMPGW 148
Query: 244 RPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSR 279
PRRLGGGLG + G+ R+ GRE+ P R P R
Sbjct: 149 IPRRLGGGLGGKKESGQ---LRFGGRER-PFRAPLR 180
>gi|403218287|emb|CCK72778.1| hypothetical protein KNAG_0L01580 [Kazachstania naganishii CBS
8797]
Length = 305
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/281 (29%), Positives = 121/281 (43%), Gaps = 79/281 (28%)
Query: 46 LLKLFEPRAPLEY-KP---PPEKRKCPP-LTGMAQFVSHFAEPGDPLYAPPVEKAETP-- 98
+ +LF PL Y KP P EKR+ P +TG+ +++S + K E P
Sbjct: 8 VAELFSRGPPLPYRKPIDYPLEKRRTNPNITGLTKYLSSLHQ----------YKEEFPRG 57
Query: 99 -VERRARIH---KLRLEKGAEKAAEELKKYDPHNDPNVSG-DPYKTLFVARLSYETTESK 153
+ R++ K EK +K +++ P DPN++G DPYKT+FV RL Y+TTE
Sbjct: 58 TANKHLRVYEDVKHEKEKEMDKLQLLCEEWKPAEDPNIAGTDPYKTIFVGRLPYDTTELD 117
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
++ F YG + +KVR+V DK +NK RGY F+ + +
Sbjct: 118 LQEIFGKYGAV---------------------DKVRVVRDK-SNKSRGYGFVLFADPQAS 155
Query: 214 KAAYKQAD---GRKLDGRRVLVDVERGRT----VPN--------------------WRPR 246
K ++ G + GR +VD ERGRT P + P
Sbjct: 156 KRTMRETGVHRGIPIKGRTCIVDFERGRTNRYFTPRRLGGGLGGRGYTQTPPRSSRFAPL 215
Query: 247 RLGG-----GLGTTRV---GGEEVNQRYSGREQEPSRGPSR 279
R G G G TR GE +RY+ +RGPSR
Sbjct: 216 RATGSDHLSGFGATRFTSDNGEFRTERYAPSSATAARGPSR 256
>gi|410915752|ref|XP_003971351.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Takifugu rubripes]
Length = 223
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 80/165 (48%), Gaps = 27/165 (16%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
+Y P+ V GD TLFV+RL+ +TTE K+ F YG I+RL
Sbjct: 38 RYKPNK--GVVGDALLTLFVSRLNPQTTEEKLYEVFSKYGDIRRL--------------- 80
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
RLV D T + YAF+EY R + A + A+ +D V VD E+ RT+
Sbjct: 81 ------RLVRDIVTGFSKRYAFVEYKEERSVVRARRDANKIVVDQHEVFVDFEQERTLKG 134
Query: 243 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE 287
W PRRLGGG G + G+ R+ GR++ P R P ++E
Sbjct: 135 WVPRRLGGGHGGKKESGQ---LRFGGRDR-PFRKPINLGVGLMQE 175
>gi|410904251|ref|XP_003965605.1| PREDICTED: nipped-B-like protein B-like [Takifugu rubripes]
Length = 2756
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 136/270 (50%), Gaps = 50/270 (18%)
Query: 260 EEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDR 319
E++N +S Q ++ P+ +EP ++ HG+ D+ R R + +D++RE + ++E + R
Sbjct: 598 EDMNHEHSQSSQPEAQKPTSKSEPHVK---HGE-DKSRDRNKDKDKDREVDINMEDARGR 653
Query: 320 PRDRDHRDDRHHRDRDRT----RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKD 375
++R DR DR+ T RD+ R + + RE DRDR +DRD +DR +D RD+ KD
Sbjct: 654 CKNRQSNKDR---DRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDRNKD--RDKNKD 708
Query: 376 RDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR-------IDSKHERDRHGER 428
RD+ RD ++ R++ +DRD D+D SRDR D DR + ERD++ +R
Sbjct: 709 RDESRDGNKVRDKNKDRDV-----DKDGEESRDRHKDKDRNKETGVGANKNKERDKNKDR 763
Query: 429 DYDPT-------DQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDR----------- 470
D P D+ DRG N E R + D+D +R
Sbjct: 764 DVGPNRNKELSKDKNKDRG-ESKERNKEKERNKA------KAKDEDGERDVGKSRTKDRE 816
Query: 471 YDQMEEDDYRYDRATSESRDKERTRDLDRE 500
D M +D R ++RD+ER R+ D+E
Sbjct: 817 RDAMRSEDRVQVRPVDKNRDRERNREKDKE 846
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 125/264 (47%), Gaps = 59/264 (22%)
Query: 274 SRGPSRSAEPRIREDRHGDRDRERSRERGRDR--EREREKSLELSHDRPRDRDHRDDRHH 331
+ P +S E R RE + GD E +R DR + R+K HD+ D HR+D +H
Sbjct: 549 AEAPKQSQE-RWRESKQGDGKTENNRGHSDDRCLDSARQK-----HDKHSDSHHREDMNH 602
Query: 332 ----------------------------RDRDRTRDRERERD------RGRERDRDRTRD 357
RDR++ +D++RE D RGR ++R +D
Sbjct: 603 EHSQSSQPEAQKPTSKSEPHVKHGEDKSRDRNKDKDKDREVDINMEDARGRCKNRQSNKD 662
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRID 417
RDR +G D ++ R K +D+E DRDR ++R+ +D + DRD+ RD D +++
Sbjct: 663 RDRENTKGEDRDKVRNKKKDREMDRDRQKDRDETKDR---NKDRDKNKDRDESRDGNKV- 718
Query: 418 SKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDR-----YD 472
RD++ +RD D D E+ R D H++ + ++ G N+ D + DR +
Sbjct: 719 ----RDKNKDRDVD-KDGEESR---DRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRN 770
Query: 473 QMEEDDYRYDRATSESRDKERTRD 496
+ D DR S+ R+KE+ R+
Sbjct: 771 KELSKDKNKDRGESKERNKEKERN 794
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 73/125 (58%), Gaps = 19/125 (15%)
Query: 287 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-------HRDDRHHRDRDRTRD 339
+DR D+D E SR+R +D++R +E + + ++ RD++ +R+ +D+++ R
Sbjct: 723 KDRDVDKDGEESRDRHKDKDRNKETGVGANKNKERDKNKDRDVGPNRNKELSKDKNKDRG 782
Query: 340 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR------------DKERDRDRTRE 387
+ER++ +ER++ + +D D RD G+ +DRE+D DK RDR+R RE
Sbjct: 783 ESKERNKEKERNKAKAKDEDGERDVGKSRTKDRERDAMRSEDRVQVRPVDKNRDRERNRE 842
Query: 388 RERDR 392
++++R
Sbjct: 843 KDKER 847
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 85/151 (56%), Gaps = 22/151 (14%)
Query: 287 EDRHGDRDRERSRERGRD--------REREREKSLELSHDRPRDRDHRDD-----RHHRD 333
+DR+ DRD+ + R+ RD ++R+ +K E S DR +D+D + +++
Sbjct: 697 KDRNKDRDKNKDRDESRDGNKVRDKNKDRDVDKDGEESRDRHKDKDRNKETGVGANKNKE 756
Query: 334 RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD--REKDRDKERDRDRTRERERD 391
RD+ +DR+ +R +E +D+ +DR ++R ++ ER+ + KD D ERD ++R ++R+
Sbjct: 757 RDKNKDRDVGPNRNKELSKDKNKDRGESKERNKEKERNKAKAKDEDGERDVGKSRTKDRE 816
Query: 392 RD-------YEVGDPDRDRGYSRDRDSDYDR 415
RD +V D++R R+R+ D +R
Sbjct: 817 RDAMRSEDRVQVRPVDKNRDRERNREKDKER 847
>gi|50294956|ref|XP_449889.1| hypothetical protein [Candida glabrata CBS 138]
gi|49529203|emb|CAG62869.1| unnamed protein product [Candida glabrata]
Length = 299
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 76/134 (56%), Gaps = 26/134 (19%)
Query: 119 EELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
++L ++DP +D ++ DPYKT+FV RL Y+T E ++++ F YG I R
Sbjct: 95 QQLLQWDPLSDNHMRDTDPYKTVFVGRLPYDTDEVQLQKVFAKYGEIVR----------- 143
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDV 234
VR+V DK+ NK RGYAF+ + T + + G +++GRR +VD+
Sbjct: 144 ----------VRVVRDKQ-NKSRGYAFVLFKETDSARVCTRDIGVHRGIQINGRRCIVDI 192
Query: 235 ERGRTVPNWRPRRL 248
ERGRT+ ++PRRL
Sbjct: 193 ERGRTIKFFKPRRL 206
>gi|449704634|gb|EMD44841.1| RNA recognition motif domain containing protein [Entamoeba
histolytica KU27]
Length = 471
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 24/129 (18%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
DP ++ + +P +T+ V RL +T ES ++R F YG IK+++
Sbjct: 10 DPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIV---------------- 53
Query: 185 DEKVRLVTD-KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
++ D K NK GYAF+EY H + + A ++A+G +++ + ++V++E+GRT ++
Sbjct: 54 -----IIKDLKGINK--GYAFVEYNHRSEAERACRRANGMRIEEKIIVVEMEKGRTEESF 106
Query: 244 RPRRLGGGL 252
+P+RLGG +
Sbjct: 107 KPKRLGGTI 115
>gi|238882323|gb|EEQ45961.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 349
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 46/224 (20%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQ--------FVSHFAEPGDPLYAPPV 92
N+ KLF+P+ P Y P PEKR P++ ++ S E A P
Sbjct: 11 NIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSIKNEIDKYLTSELPERESKAQAVP- 69
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG--------DPYKTLFVAR 144
+K V+ + + H+ L++ A++ E ++ + N+P + DP++T+F+AR
Sbjct: 70 KKISKIVKHKQKQHEANLKRLAKEKDHE-RQLEEWNNPTLFAKQEREFMKDPFRTVFIAR 128
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
L Y TE I R F YG I E +R++ DK+ K RGY F
Sbjct: 129 LDYNLTELDISRAFARYGMI---------------------ESIRIIRDKQ-GKSRGYGF 166
Query: 205 IEYMHTRDMKAAYKQAD--GRKLDGRRVLVDVERGRTVPNWRPR 246
+ Y D G KL R +LVD+ER R + NWRPR
Sbjct: 167 VVYERNTDAMNCVNDLSRTGLKLGNRPILVDIERSRVLKNWRPR 210
>gi|392594814|gb|EIW84138.1| hypothetical protein CONPUDRAFT_51126 [Coniophora puteana
RWD-64-598 SS2]
Length = 177
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 88/193 (45%), Gaps = 41/193 (21%)
Query: 42 LTANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYA-------- 89
L NLLKLF PR PL YK P P + + ++G+A+ +S E D
Sbjct: 7 LPPNLLKLFAPRPPLPYKRPVDRDPGRIRPKHVSGVAEILSKLKEASDNTLINGDGGEGM 66
Query: 90 -----PPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVAR 144
P AE + R + + K A+E Y P +D GDPYKTLF++R
Sbjct: 67 EEGEEPTFTLAEETKRQMRREERRKRRTEDFKVAKE--NYKPADDAEAIGDPYKTLFISR 124
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
L TES ++REFESYG I E+VR+V +K + RGYAF
Sbjct: 125 LHKAATESDLRREFESYGTI---------------------ERVRIVRNKN-GRSRGYAF 162
Query: 205 IEYMHTRDMKAAY 217
I Y RDMK +
Sbjct: 163 IVYERERDMKGTH 175
>gi|255724646|ref|XP_002547252.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135143|gb|EER34697.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 343
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 97/223 (43%), Gaps = 44/223 (19%)
Query: 45 NLLKLFEPRAPL-EYKP---PPEKRK---CPPLTGMAQFVSHFAEPGDPLYAPPVEKAET 97
N+ KLF+ + P ++P PPEKR+ P++ + + ++ + P +
Sbjct: 11 NIQKLFQAKPPFPHFEPTDYPPEKRRTASISPISSIKEVINEYLISELPNHEDKSSSKSK 70
Query: 98 PVERRARIHKLRLEKG----AEKAAEELKKYDPHNDPNVSG--------DPYKTLFVARL 145
R + HK + E+ K E ++ D NDP V DP T+F+ARL
Sbjct: 71 KSLRIIK-HKQKQEEAKIRKTAKQKEFQRQLDEWNDPAVFAKLEREFMKDPLCTVFIARL 129
Query: 146 SYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFI 205
Y TE I + F YG I E +R++ D + K RGY FI
Sbjct: 130 DYNLTELDISKAFAKYGMI---------------------ESIRIIRD-QNGKSRGYGFI 167
Query: 206 EYMHTRDMKAAYKQA--DGRKLDGRRVLVDVERGRTVPNWRPR 246
Y D ++ + G KL R +LVD+ER R + NW+PR
Sbjct: 168 VYERNTDAQSCVDELCRSGLKLGNRTILVDMERSRVLKNWKPR 210
>gi|328766959|gb|EGF77011.1| hypothetical protein BATDEDRAFT_92222 [Batrachochytrium
dendrobatidis JAM81]
Length = 263
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/165 (34%), Positives = 76/165 (46%), Gaps = 27/165 (16%)
Query: 118 AEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
A L D DP ++ P +TLFV RL+ T+ + F YG + L C
Sbjct: 23 ALILIPPDAKLDPTITTTPSRTLFVGRLAPSVTQDILADTFRPYGTV--LQC-------- 72
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
R++ + T + RGYAF+E D+ AA + G L G+ +LVD E G
Sbjct: 73 -----------RIIVNNITGQSRGYAFVEMESQHDVNAAIRACHGIHLHGQHILVDTEHG 121
Query: 238 RTVPNWRPRRLGGGL------GTTRVGGEEVNQRYSGREQEPSRG 276
RTV W PRRLGGGL G R GG +Y + + PS G
Sbjct: 122 RTVTGWIPRRLGGGLGGKKESGQMRFGGRHHPFKYPLQSRLPSTG 166
>gi|150865863|ref|XP_001385249.2| hypothetical protein PICST_32340 [Scheffersomyces stipitis CBS
6054]
gi|149387119|gb|ABN67220.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 314
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 94/218 (43%), Gaps = 37/218 (16%)
Query: 46 LLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVERRARI 105
+ KLF P+ PL Y + T VS + D E+ + ++++
Sbjct: 12 IQKLFAPKPPLLYLSSSDFAAGQRATASITPVSAWRSEIDKYTVQLKEQDSSSIKKQPTK 71
Query: 106 HKLRLEKGAEKAA---EELK-KYDPHNDPNV--------SGDPYKTLFVARLSYETTESK 153
H+L+ E EK E K + NDP + DPY+T+FV+RL + TE
Sbjct: 72 HQLQEEAAREKQLLKRESFKRQLREWNDPEILHQNEKEFMKDPYRTIFVSRLDFSLTELD 131
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
I + F YG I E VR++ D T K RGY FI + D
Sbjct: 132 ISKHFSKYGVI---------------------ESVRIIRDSVTGKSRGYGFIVFEREWDA 170
Query: 214 KAAYKQA--DGRKL--DGRRVLVDVERGRTVPNWRPRR 247
++ + G +L R +LVD+ERGR V NWRPRR
Sbjct: 171 QSCISEVARTGVRLPQAKRTILVDIERGRIVSNWRPRR 208
>gi|183229788|ref|XP_001913374.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|169803196|gb|EDS89871.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
Length = 372
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 74/129 (57%), Gaps = 24/129 (18%)
Query: 125 DPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPC 184
DP ++ + +P +T+ V RL +T ES ++R F YG IK+++
Sbjct: 10 DPTHNLKATDNPNRTIVVLRLPKKTDESILQRLFSEYGEIKKIV---------------- 53
Query: 185 DEKVRLVTD-KETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNW 243
++ D K NK GYAF+EY H + + A ++A+G +++ + ++V++E+GRT ++
Sbjct: 54 -----IIKDLKGINK--GYAFVEYNHRSEAERACRRANGMRIEEKIIVVEMEKGRTEESF 106
Query: 244 RPRRLGGGL 252
+P+RLGG +
Sbjct: 107 KPKRLGGTI 115
>gi|365760179|gb|EHN01919.1| Snp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 300
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 25/133 (18%)
Query: 120 ELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
+L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++++ F +G I
Sbjct: 88 KLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEI-------------- 133
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVE 235
EK+R+V DK T + RGYAFI + K A+K+ G ++ + +VD+E
Sbjct: 134 -------EKIRIVKDKITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIE 186
Query: 236 RGRTVPNWRPRRL 248
RGRTV ++PRRL
Sbjct: 187 RGRTVKYFKPRRL 199
>gi|401839251|gb|EJT42547.1| SNP1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 300
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 25/133 (18%)
Query: 120 ELKKYDPHNDPNV-SGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSS 178
+L+ ++P+ DP++ DPY+T+F+ RL Y+ E ++++ F +G I
Sbjct: 88 KLQSWNPNADPHIRDTDPYRTIFIGRLPYDLNEIELQKHFVRFGEI-------------- 133
Query: 179 RDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQAD---GRKLDGRRVLVDVE 235
EK+R+V DK T + RGYAFI + K A+K+ G ++ + +VD+E
Sbjct: 134 -------EKIRIVKDKITQQSRGYAFIVFKDPISSKMAFKEIGVHRGIQIKDKLCIVDIE 186
Query: 236 RGRTVPNWRPRRL 248
RGRTV ++PRRL
Sbjct: 187 RGRTVKYFKPRRL 199
>gi|448516947|ref|XP_003867675.1| U1-70K component of the U1 snRNP [Candida orthopsilosis Co 90-125]
gi|380352014|emb|CCG22238.1| U1-70K component of the U1 snRNP [Candida orthopsilosis]
Length = 300
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 97/227 (42%), Gaps = 57/227 (25%)
Query: 46 LLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVEKAETPVER 101
+ KLF+P+ PL Y PP PE+R P+ ++ + ++ + D E P +R
Sbjct: 12 IQKLFQPKPPLVYIPPTDYPPEERSTLPIAPISNYKNYIKDYLD---------NELP-QR 61
Query: 102 RARI-------HKLRLEKGAEKAAEELKKYDPH----NDPN--------VSGDPYKTLFV 142
+R HK +L K ++ + +D NDP V DPYKT+F+
Sbjct: 62 ESRTFKPEVSEHKKKLLNAQNKRQKQNESFDRQMRDWNDPELLAKNEKEVMKDPYKTVFI 121
Query: 143 ARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGY 202
ARL Y TE I + F +G I + L+ K RGY
Sbjct: 122 ARLDYSLTELDISQYFRKFGVIDSI----------------------LIIRDHQGKSRGY 159
Query: 203 AFIEYMHTRDMKAAYKQAD--GRKLDGRRVLVDVERGRTVPNWRPRR 247
FI Y D +A + G KL R +L+D+ER R NW+PRR
Sbjct: 160 GFIVYERDADAQACVSELSRTGAKLKERTILIDIERSRVWRNWKPRR 206
>gi|241951514|ref|XP_002418479.1| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
gi|223641818|emb|CAX43780.2| U1 small nuclear ribonucleoprotein, putative [Candida dubliniensis
CD36]
Length = 343
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 103/224 (45%), Gaps = 46/224 (20%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMA-------QFVSH-FAEPGDPLYAPPV 92
N+ KLF+P+ P Y P PEKR P++ ++ +++S E A P
Sbjct: 11 NIQKLFQPKPPFPYISPIDYPPEKRSTKPISPISSLKHEIEKYISQELPERESKASAVP- 69
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSG--------DPYKTLFVAR 144
+K V+ + + H+ L++ A+ E ++ + N+P + DP++T+F+AR
Sbjct: 70 KKISKIVKHKQKQHEANLKRLAKDKDHE-RQLEEWNNPTLFAKQEREFMKDPFRTVFIAR 128
Query: 145 LSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAF 204
L Y TE I R F YG I E ++++ DK+ K RGY F
Sbjct: 129 LDYNLTELDISRAFARYGMI---------------------ESIKIIRDKQ-GKSRGYGF 166
Query: 205 IEYMHTRDMKAAYKQAD--GRKLDGRRVLVDVERGRTVPNWRPR 246
+ Y D A G KL R +LVD+ER R + NWRPR
Sbjct: 167 VVYERNPDAVACVNDLSRTGLKLGNRPILVDIERSRVLKNWRPR 210
>gi|405972647|gb|EKC37405.1| U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Crassostrea
gigas]
Length = 226
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 64/127 (50%), Gaps = 23/127 (18%)
Query: 122 KKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDG 181
Y P+ D V+GDP T+FV+RL+ +T E ++ +F +G I
Sbjct: 23 SSYKPNKD--VAGDPNLTVFVSRLNPKTDEDTLESQFSYFGEI----------------- 63
Query: 182 KPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 241
K+RLV D T RGYAF+E+ R A + G ++DG VLVD E RT+P
Sbjct: 64 ----HKIRLVRDIITGHSRGYAFVEFKEGRSAVRAERDGHGMEIDGYEVLVDFELERTLP 119
Query: 242 NWRPRRL 248
W PRRL
Sbjct: 120 GWVPRRL 126
>gi|344230215|gb|EGV62100.1| RNA-binding domain-containing protein [Candida tenuis ATCC 10573]
Length = 321
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 96/224 (42%), Gaps = 44/224 (19%)
Query: 44 ANLLKLFEPRAPLEYKPPP-------EKRKCPPLTGMAQFVSHF---------AEPGDPL 87
A + KLF PR PL + PP + P++ A + ++ AE P
Sbjct: 12 AAIQKLFRPRLPLPFIPPTDYASNTRKTASITPISAYALLIRNYVDQELPQIEAERQSPD 71
Query: 88 YAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSY 147
P +AE RR I K R + + EL N+ + DPY+T+FV+RL Y
Sbjct: 72 KTPFQIQAEKTQRRRLDIQKSRQRQLTDWNNPELLL---QNEKDFMKDPYRTVFVSRLDY 128
Query: 148 ETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEY 207
E + + F +GPI E VR++ T K RGY FI +
Sbjct: 129 SLGEIDVSKHFSRFGPI---------------------ESVRIIRSSSTGKSRGYGFIVF 167
Query: 208 MHTRDMKAAYKQA--DGRKLD--GRRVLVDVERGRTVPNWRPRR 247
D K+ ++ G K+ R +LVD+ERGR V NW PRR
Sbjct: 168 EKDTDAKSCIRELAPTGLKIGPGSRTILVDMERGRLVRNWLPRR 211
>gi|83314969|ref|XP_730591.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23490359|gb|EAA22156.1| Drosophila melanogaster SD07741p [Plasmodium yoelii yoelii]
Length = 931
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 85/128 (66%), Gaps = 2/128 (1%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
+R +RDR R ER R+RE ER+++ E DR R+ + RD +RDR R+ ER+R+R
Sbjct: 696 NRETERDRNREVERDRNREVERDRNRETERDRNREVE-RDRNRETERDRNREVERDRNRE 754
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 407
ERDR+R RDR R+ GRD R+ E+DR++E ++DR RE E+DR+ E G DR+R R
Sbjct: 755 VERDRNRETGRDRNRETGRDRNREVERDRNREMEKDRNREVEKDRNRETG-RDRNRETGR 813
Query: 408 DRDSDYDR 415
DR+ + DR
Sbjct: 814 DRNREIDR 821
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/132 (44%), Positives = 87/132 (65%), Gaps = 2/132 (1%)
Query: 285 IREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRDRERE 343
+ DR+ + +R+R+RE +DR RE EK +R R+R+ DR+ +RDR R+ ER+
Sbjct: 651 VERDRNREVERDRNREVEKDRNREVEKDRNREVERDRNREVERDRNRETERDRNREVERD 710
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR 403
R+R ERDR+R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ E G DR+R
Sbjct: 711 RNREVERDRNRETERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETG-RDRNR 769
Query: 404 GYSRDRDSDYDR 415
RDR+ + +R
Sbjct: 770 ETGRDRNREVER 781
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 87/134 (64%), Gaps = 10/134 (7%)
Query: 285 IREDRHGDRDRERSRERGRDREREREKSLELSHDRP------RDRDHRDDRHHRDRDRTR 338
I +R+ R R R ER R+RE ER+++ E+ DR R+R+ DR +R+ +R R
Sbjct: 629 IDSERNKKRPRNRETERDRNREVERDRNREVERDRNREVEKDRNREVEKDR-NREVERDR 687
Query: 339 DRERERDRGRERDRDRTR--DRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 396
+RE ERDR RE +RDR R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ EV
Sbjct: 688 NREVERDRNRETERDRNREVERDRNREVERDRNRETERDRNREVERDRNRETERDRNREV 747
Query: 397 GDPDRDRGYSRDRD 410
+ DR+R RDR+
Sbjct: 748 -ERDRNREVERDRN 760
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/148 (41%), Positives = 93/148 (62%), Gaps = 11/148 (7%)
Query: 286 REDRHGDRDRERSRERGRDR----EREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRE 341
++D H D +E ER + R E ER+++ E+ DR R+ + RD ++DR R+ E
Sbjct: 618 KQDSHIDGQKEIDSERNKKRPRNRETERDRNREVERDRNREVE-RDRNREVEKDRNREVE 676
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDR 401
++R+R ERDR+R +RDR R+ RD R+ E+DR++E +RDR RE ERDR+ EV + DR
Sbjct: 677 KDRNREVERDRNREVERDRNRETERDRNREVERDRNREVERDRNRETERDRNREV-ERDR 735
Query: 402 DRGYSRDRDSDYDRIDSKHERDRHGERD 429
+R RDR+ + +R +R+R ERD
Sbjct: 736 NRETERDRNREVER-----DRNREVERD 758
>gi|348518549|ref|XP_003446794.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oreochromis niloticus]
Length = 237
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 72/199 (36%), Positives = 99/199 (49%), Gaps = 31/199 (15%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
+Y P+ V GDP TLFV+RL+ +TTE K+ + F YG I+RL
Sbjct: 38 RYKPNK--GVVGDPLLTLFVSRLNPQTTEDKLHKVFSKYGDIQRL--------------- 80
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
RLV D T +GYAFIEY R + A + A+ +D V VD E+ RT+
Sbjct: 81 ------RLVRDIVTGFSKGYAFIEYKEERSVVRARRDANKLVVDQHEVFVDFEQERTLKG 134
Query: 243 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE---DRHGDRDRERSR 299
W PRRLGGGLG + G+ R+ GR++ P R P ++E RE R
Sbjct: 135 WVPRRLGGGLGGKKESGQ---LRFGGRDR-PFRKPINLGVDPVQERGGGGGVGGGREWDR 190
Query: 300 ERGRDRE-REREKSLELSH 317
GR+RE R+R ++ E +
Sbjct: 191 PGGRNREDRDRHRTAEWGN 209
>gi|354543650|emb|CCE40371.1| hypothetical protein CPAR2_104090 [Candida parapsilosis]
Length = 302
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 99/221 (44%), Gaps = 45/221 (20%)
Query: 46 LLKLFEPRAPLEYKPP----PEKRK---CPPLTGMAQFVSHFAEPGDPLYAPPVEKAETP 98
+ KLF+P+ P+ + PP PEKR P++ F+ + + P V+K
Sbjct: 12 IQKLFQPKPPIVHIPPTDYPPEKRSTLSISPVSNYKSFIKKYVDNELPQRESRVQKTAMS 71
Query: 99 VERRARIHKLRL-----EKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSYE 148
R+ KL L +K ++ +++ + DP N+ V DPYKT+F+ARL Y
Sbjct: 72 KHRQ----KLLLANDRRKKQSDSFNRQMRDWNDPELLAKNENEVMKDPYKTVFIARLDYT 127
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
TE I + F YG I + + ++ D + RGY FI +
Sbjct: 128 LTELDISQYFRKYGVI---------------------DSISIIRD-HNGRSRGYGFIVFE 165
Query: 209 HTRDMKAAYKQAD--GRKLDGRRVLVDVERGRTVPNWRPRR 247
D +A + G K+ R +LVDVER R NW+PRR
Sbjct: 166 READAQACISELSRTGVKMKERTILVDVERSRVWRNWKPRR 206
>gi|307203942|gb|EFN82849.1| Death-inducer obliterator 1 [Harpegnathos saltator]
Length = 2352
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 52/153 (33%), Positives = 87/153 (56%), Gaps = 11/153 (7%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
D R++ +ERGR+R+ R K R R R RDR +TRD+ +E+ GR ++
Sbjct: 1511 DERRKKDKERGRERDSNRSKG---KDRRERSRSRHRHSRDRDRSKTRDKSKEQKSGRGKE 1567
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 411
R +D++R +D+ R+R KDRD++ R+R R+ ERDR +++G+ R R S R+S
Sbjct: 1568 SKREKDKERDKDK----VRERNKDRDRKDSRERGRQNERDR-HKMGNDGRMRNRSTSRES 1622
Query: 412 -DYDRIDSKHERDRHGERDYDPTDQE--DDRGW 441
D D+ + + + ++ E PT ++ +DR W
Sbjct: 1623 KDIDKREDERKMEKKKEVSPPPTAEKPIEDRLW 1655
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 64/125 (51%), Gaps = 11/125 (8%)
Query: 293 RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDR 352
RD+ + ++ GR +E +REK D+ RD+D R+R++ RDR+ R+RGR+ +R
Sbjct: 1554 RDKSKEQKSGRGKESKREK------DKERDKDKV-----RERNKDRDRKDSRERGRQNER 1602
Query: 353 DRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSD 412
DR + + GR R R R+ + +E +R +++E P DR + D
Sbjct: 1603 DRHKMGNDGRMRNRSTSRESKDIDKREDERKMEKKKEVSPPPTAEKPIEDRLWRHVEDET 1662
Query: 413 YDRID 417
+ ID
Sbjct: 1663 TNTID 1667
Score = 48.5 bits (114), Expect = 0.008, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 59/114 (51%), Gaps = 14/114 (12%)
Query: 318 DRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRD 377
D + ++ D+R +D++R R+R+ R +G++R RDR R RD+ K++
Sbjct: 1502 DAKKSKNGMDERRKKDKERGRERDSNRSKGKDRRERSRSRHRHSRDRDRSKTRDKSKEQK 1561
Query: 378 KERDRDRTRER--ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 429
R ++ RE+ ERD+D R+R+ D DR DS+ ER R ERD
Sbjct: 1562 SGRGKESKREKDKERDKD-----------KVRERNKDRDRKDSR-ERGRQNERD 1603
>gi|380420333|ref|NP_001154919.2| nipped-B-like protein B [Danio rerio]
gi|408407682|sp|F1QBY1.1|NIPLB_DANRE RecName: Full=Nipped-B-like protein B
Length = 2876
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 98/166 (59%), Gaps = 25/166 (15%)
Query: 288 DRHGDRDRERSRERGRDRE----------------REREKSLELSHDRPRDRD------- 324
D+ +D E+ RE+ +D+E RE+++ EL R +DRD
Sbjct: 755 DKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDKELEKGREKDRDKEMEKAR 814
Query: 325 HRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDR 384
+D ++ R +D+++E ++G+E+DRD+ R++DR + R +D ++ REKDRDK R++DR
Sbjct: 815 EKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDKVRDKDRDKVREKDRDKVREKDR 874
Query: 385 TRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK-HERDRHGERD 429
+ RE+DR+ ++ + DRD+G +DRD + + K E++R +RD
Sbjct: 875 DKLREKDRE-KIRERDRDKGREKDRDKEQVKTREKDQEKERLKDRD 919
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 88/129 (68%), Gaps = 6/129 (4%)
Query: 292 DRDRERSRERGRDRE----REREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
D++ E+ RE+ RD+E RE+++ EL R +D+D ++ +++DR + RE++RD+
Sbjct: 795 DKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKG-QEKDRDKVREKDRDKV 853
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE-VGDPDRDRGYS 406
R++DRD+ R++DR + R +D ++ REKDR+K R+RDR + RE+DRD E V ++D+
Sbjct: 854 RDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKE 913
Query: 407 RDRDSDYDR 415
R +D D +R
Sbjct: 914 RLKDRDKER 922
>gi|333777884|dbj|BAK23967.1| nipped-B like a [Danio rerio]
Length = 2876
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/129 (39%), Positives = 88/129 (68%), Gaps = 6/129 (4%)
Query: 292 DRDRERSRERGRDRE----REREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
D++ E+ RE+ RD+E RE+++ EL R +D+D ++ +++DR + RE++RD+
Sbjct: 795 DKELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKG-QEKDRDKVREKDRDKV 853
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE-VGDPDRDRGYS 406
R++DRD+ R++DR + R +D ++ REKDR+K R+RDR + RE+DRD E V ++D+
Sbjct: 854 RDKDRDKVREKDRDKVREKDRDKLREKDREKIRERDRDKGREKDRDKEQVKTREKDQEKE 913
Query: 407 RDRDSDYDR 415
R +D D +R
Sbjct: 914 RLKDRDKER 922
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 86/134 (64%), Gaps = 14/134 (10%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-----HRDRDRTRDRER 342
DR ++++ R +E+ + R+++R K LE ++ +D++ DR ++ R +D+++
Sbjct: 737 DRVKEQEKVRDKEQVKGRDKKRSKDLEKCREKDQDKELEKDREKNQDKELEKGREKDQDK 796
Query: 343 ERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK------ERDRDRTRERERDRDYEV 396
E ++GRE+DRD+ ++ R +D+ ++ E+ REKD+DK E+DRD+ RE++RD+ V
Sbjct: 797 ELEKGREKDRDKEMEKAREKDQDKELEKGREKDQDKELEKGQEKDRDKVREKDRDK---V 853
Query: 397 GDPDRDRGYSRDRD 410
D DRD+ +DRD
Sbjct: 854 RDKDRDKVREKDRD 867
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 90/169 (53%), Gaps = 46/169 (27%)
Query: 286 REDRHGDRDRERSR------------ERGRDRERE------------REKSLELSHDRPR 321
+E+RH ++D + S+ E RD+E+E REK LE D+ R
Sbjct: 651 KEERHREKDSDSSKGRRSDTSKSSRVEHNRDKEQEQEKVGDKGLEKGREKELEKGRDKER 710
Query: 322 DRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRD----------RGRDHERD 371
+D +D+++ RD+E E+ R +ER +DR +++++ RD R +D E+
Sbjct: 711 VKD-----QEKDQEKGRDKEVEKGRYKERVKDRVKEQEKVRDKEQVKGRDKKRSKDLEKC 765
Query: 372 REKDRDKERDRDRTRERERDRDYEVG-----DPDRDRGYSRDRDSDYDR 415
REKD+DKE ++D RE+ +D++ E G D + ++G +DRD + ++
Sbjct: 766 REKDQDKELEKD--REKNQDKELEKGREKDQDKELEKGREKDRDKEMEK 812
>gi|190345461|gb|EDK37350.2| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 53/229 (23%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-------- 92
+ KLF PR PL + PP PEKR P++ ++++ + E +A +
Sbjct: 12 TIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQE-----HAQRIREENETTD 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSY 147
ET ++++A+ R AE +++++ DP ++ V DPY TLF+ARL Y
Sbjct: 67 TAVETTLQKQAKARAKRERAQAESFQRQMEEWLDPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 148 ETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEY 207
+ TE ++ + F +G I +R++ D E K +GY F+ +
Sbjct: 127 DVTEVEVSQSFSRFGAIA---------------------SIRIIRDNE-GKSKGYGFVVF 164
Query: 208 MHTRDMKAAYKQ--ADGRKL-------DGRRVLVDVERGRTVPNWRPRR 247
D ++ + G K+ R LVD+ER R + NW+PRR
Sbjct: 165 ERDTDAATCVRELASTGIKIGPESSDRKPRTALVDIERSRVIRNWKPRR 213
>gi|147843908|emb|CAN83717.1| hypothetical protein VITISV_017075 [Vitis vinifera]
Length = 216
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 125/295 (42%), Gaps = 79/295 (26%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLV 191
++ D +++V L Y TE I++ F YG I V+++
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIV---------------------AVKII 39
Query: 192 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGG 251
++ + Y F+ + + R A +GR +DGR V+V+ R R
Sbjct: 40 NERGVG-GKCYGFVTFTNPRSAIDAINDMNGRDIDGRIVVVNEVRTR------------- 85
Query: 252 LGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREK 311
GG R S R R+ ERG D +R R++
Sbjct: 86 ------GGRSNFGRESFR---------------------------RNSERGMDWDRGRDR 112
Query: 312 SLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD 371
+ HD+ RD R+ DR+RD +RER+RG ER RD R RDR DR RD +RD
Sbjct: 113 ERDYGHDKDHFRD-------RNIDRSRDHDRERERGHERARDHDRTRDRFMDRNRDQDRD 165
Query: 372 REKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG 426
E D E++ R +++ +RD+++ D DRDR + D D +H + R+G
Sbjct: 166 ME---DNEQEHSRNHDQDWERDHDI-DWDRDREMNNTNDHDKSGDKDEHSKKRNG 216
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 68/111 (61%), Gaps = 9/111 (8%)
Query: 336 RTRDRERERDRGRERDRDRTRD----RDRGRDRGRDHERDREKDRDKERDRDRTRER--E 389
R +R + DRGR+R+RD D RDR DR RDH+R+RE+ ++ RD DRTR+R +
Sbjct: 98 RNSERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERGHERARDHDRTRDRFMD 157
Query: 390 RDRDYEVGDPDRDRGYSRDRDSDYDR---IDSKHERDRHGERDYDPTDQED 437
R+RD + D ++ +SR+ D D++R ID +R+ + D+D + +D
Sbjct: 158 RNRDQDRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDHDKSGDKD 208
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 68/106 (64%), Gaps = 11/106 (10%)
Query: 333 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R+ DR ++R DR R++
Sbjct: 105 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERARDHDRTRDRFMDRNRDQ 162
Query: 389 ERDRDYEVGDPDR--DRGYSRDRDSDYDR---IDSKHERDRHGERD 429
+RD + + R D+ + RD D D+DR +++ ++ D+ G++D
Sbjct: 163 DRDMEDNEQEHSRNHDQDWERDHDIDWDRDREMNNTNDHDKSGDKD 208
>gi|443707095|gb|ELU02850.1| hypothetical protein CAPTEDRAFT_133662 [Capitella teleta]
Length = 218
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 23/126 (18%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
KY P+ V G+P T+FV RL++ TTE ++ +F+ YG I
Sbjct: 38 KYKPNK--GVRGNPECTVFVGRLNHSTTEETLEEQFKRYGNI------------------ 77
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
E +RL+ D T +GYAF+EY A +A+ +D + ++VD+E RT+P
Sbjct: 78 ---EHIRLIRDIVTGFSQGYAFVEYTEPNAACRASIEANKIVIDDKEIMVDMECERTMPG 134
Query: 243 WRPRRL 248
W PRRL
Sbjct: 135 WVPRRL 140
>gi|390340600|ref|XP_003725279.1| PREDICTED: uncharacterized protein LOC100893111 [Strongylocentrotus
purpuratus]
Length = 1497
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 122/248 (49%), Gaps = 53/248 (21%)
Query: 228 RRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIRE 287
R +++ E G +V +P G V + +E S +RS+ +
Sbjct: 1059 RSYIIETETGSSVTRAKPAVSGVRTSDVVVLDLSKEDTWGAKELTESIKEARSSG----K 1114
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDR 346
RH D+DR++ RE+ RD++RER + D+ RD+D HRD H R RD+ RDR++E+D+
Sbjct: 1115 SRHKDKDRDKEREKPRDKDRERHR------DKDRDKDSHRDKEHERKRDKDRDRQKEKDK 1168
Query: 347 GRERDRDRT------RDRDRGRDRGRDHERD---REKDRDK---------------ERDR 382
RER +DR +DR+R +DR +D +D REKDRD E+DR
Sbjct: 1169 DRERRKDREGESSKEKDRERRKDREKDSSKDKDRREKDRDGRKEREKESSKEKDRGEKDR 1228
Query: 383 DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDS--------KHERDR-----HGERD 429
+ RE+E+DRD E ++R + RD +R DS + E+ R G RD
Sbjct: 1229 SKHREKEKDRDRE----KKERSH-RDNKESAERTDSGKKERHRDRDEKKREREKESGSRD 1283
Query: 430 YDPTDQED 437
D + +D
Sbjct: 1284 GDKSSTKD 1291
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/112 (42%), Positives = 79/112 (70%), Gaps = 6/112 (5%)
Query: 331 HRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERER 390
H+D+DR ++RE+ RD+ RER RD+ RD+D RD+ +HER R+KDRD+++++D+ RER +
Sbjct: 1117 HKDKDRDKEREKPRDKDRERHRDKDRDKDSHRDK--EHERKRDKDRDRQKEKDKDRERRK 1174
Query: 391 DRDYEVG-DPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP-TDQEDDRG 440
DR+ E + DR+R R++DS D+ + E+DR G ++ + + +E DRG
Sbjct: 1175 DREGESSKEKDRERRKDREKDSSKDK--DRREKDRDGRKEREKESSKEKDRG 1224
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 25/144 (17%)
Query: 291 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 350
G++DR + RE+ +DR+RE+ ++R HRD++ +R + +ER RDR
Sbjct: 1224 GEKDRSKHREKEKDRDREK-----------KERSHRDNKESAERTDSGKKERHRDRD--- 1269
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR----DYEVGDPDRDRGYS 406
++ R R+++ G RD ++ KD D+++ R+ R R++DR + E D DR+R
Sbjct: 1270 EKKREREKESG---SRDGDKSSTKDGDRDKRREEKRHRDKDRERRKEKESNDSDRERRKH 1326
Query: 407 RDRDSDYDRIDSKHERDRHGERDY 430
RD+D DR +R++ GER +
Sbjct: 1327 RDKDGSADR----RKREKSGERKH 1346
>gi|448089233|ref|XP_004196749.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|448093471|ref|XP_004197780.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359378171|emb|CCE84430.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
gi|359379202|emb|CCE83399.1| Piso0_003974 [Millerozyma farinosa CBS 7064]
Length = 325
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 105/222 (47%), Gaps = 40/222 (18%)
Query: 44 ANLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-KAETP 98
AN+ KLF + P YKPP PE+RK +TG++ + + + L E + ET
Sbjct: 10 ANIQKLFALKPPHVYKPPLDHPPEERKTCHITGLSSWRDVYKQHCSELQIQASEVRPETQ 69
Query: 99 VERRARIHKLRLEKGAEKAAEELKKYD-----PHNDPNVSGDPYKTLFVARLSYETTESK 153
E++ R + R ++ E +L++++ + + DPYKT+F+ARL Y TE
Sbjct: 70 QEQQKRRREERRKQIQESHDRQLREWNDVELLKKQEQELMKDPYKTVFLARLDYSLTELD 129
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
I + YG I + +R++ D+E + RGY F+ + D
Sbjct: 130 ISKHVSKYGVI---------------------DSIRIIRDRE-GRSRGYGFVAFERESDA 167
Query: 214 KAAYKQA--DGRKLD------GRRVLVDVERGRTVPNWRPRR 247
K K+ G K+ R +LVD+ERGR V NW+PRR
Sbjct: 168 KNCVKELAPTGLKIPVPDKTPTRTILVDIERGRLVRNWKPRR 209
>gi|146419632|ref|XP_001485777.1| hypothetical protein PGUG_01448 [Meyerozyma guilliermondii ATCC
6260]
Length = 330
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 53/229 (23%)
Query: 45 NLLKLFEPRAPLEYKPP----PEKRKCPPLTGMAQFVSHFAEPGDPLYAPPV-------- 92
+ KLF PR PL + PP PEKR P++ ++++ + E +A +
Sbjct: 12 TIKKLFAPRPPLLHVPPLDYPPEKRSTKPVSPVSKWKEIYQE-----HAQRIREENETTD 66
Query: 93 EKAETPVERRARIHKLRLEKGAEKAAEELKKY-DPH----NDPNVSGDPYKTLFVARLSY 147
ET ++++A+ R AE +++++ DP ++ V DPY TLF+ARL Y
Sbjct: 67 TAVETTLQKQAKARAKRERAQAESFQRQMEEWLDPSLAEKHEKEVMKDPYCTLFIARLDY 126
Query: 148 ETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEY 207
+ TE ++ + F +G I +R++ D E K +GY F+ +
Sbjct: 127 DVTEVEVSQSFSRFGAIA---------------------SIRIIRDNE-GKSKGYGFVVF 164
Query: 208 MHTRDMKAAYKQ--ADGRKL-------DGRRVLVDVERGRTVPNWRPRR 247
D ++ + G K+ R LVD+ER R + NW+PRR
Sbjct: 165 ERDTDAATCVRELASTGIKIGPESSDRKPRTALVDIERSRVIRNWKPRR 213
>gi|170583877|ref|XP_001896769.1| hypothetical protein Bm1_26580 [Brugia malayi]
gi|158595927|gb|EDP34383.1| hypothetical protein Bm1_26580 [Brugia malayi]
Length = 175
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 43/72 (59%), Gaps = 13/72 (18%)
Query: 185 DEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
D +R V NK F+E AYK+ADG K+DGRRV+VD ERGRT +W
Sbjct: 13 DTALRAVYQLSINKL----FLE---------AYKKADGMKIDGRRVVVDYERGRTQKSWL 59
Query: 245 PRRLGGGLGTTR 256
PRRLGGG G TR
Sbjct: 60 PRRLGGGKGDTR 71
>gi|339006472|ref|ZP_08639047.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
gi|338775681|gb|EGP35209.1| scaffolding dockerin binding protein A [Brevibacillus laterosporus
LMG 15441]
Length = 1272
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 94/149 (63%), Gaps = 6/149 (4%)
Query: 268 GREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD 327
+++EP + R EP D+ ++DR++ E+ RD+E E+++ E D RDR+
Sbjct: 886 AKDKEPEK--DRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKD--RDREPEK 941
Query: 328 DR-HHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 386
DR ++DR ++ E+++D+ E+DRD+ ++DR ++ G+D +++ KDRDKE +DR +
Sbjct: 942 DRDKEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDRDK 1001
Query: 387 ERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
E E+DRD E G DRD+ RD++ + D+
Sbjct: 1002 EPEKDRDKEPGK-DRDKEPERDKEKEPDK 1029
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 77/111 (69%), Gaps = 6/111 (5%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
DRD+E ++R R+ E++R+K E D+ ++D +D +DRD+ +++R+++ G++RD
Sbjct: 926 DRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKD-KDKEPEKDRDKEPEKDRDKEPGKDRD 984
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 402
++ +DRD ++ G+D +++ EKDRDKE +DR +E ERD++ E PD++
Sbjct: 985 KEPGKDRD--KEPGKDRDKEPEKDRDKEPGKDRDKEPERDKEKE---PDKE 1030
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 82/128 (64%), Gaps = 11/128 (8%)
Query: 299 RERGRDREREREKSLELSHDRPRDRDHRDDR-HHRDRDRTRDRERERDRGRERDRDRTRD 357
+E +DR++E EK RD++ DR ++DR ++ E++RD+ E+DRDR +
Sbjct: 889 KEPEKDRDKEPEKD--------RDKEPEKDRDKEPEKDRDKEPEKDRDKEPEKDRDREPE 940
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG-DPDRDRGYSRDRDSDYDRI 416
+DR ++ +D +++ EKD+DKE ++DR +E E+DRD E G D D++ G RD++ DR
Sbjct: 941 KDRDKEPEKDRDKEPEKDKDKEPEKDRDKEPEKDRDKEPGKDRDKEPGKDRDKEPGKDR- 999
Query: 417 DSKHERDR 424
D + E+DR
Sbjct: 1000 DKEPEKDR 1007
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 77/128 (60%), Gaps = 13/128 (10%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRT----RDRERER 344
+ G ++ + + + D+E+E + D D + +D +DRD+ RD+E E+
Sbjct: 856 QEGVKELKIAVKTVTDKEKESKP------DLGTDGEAKDKEPEKDRDKEPEKDRDKEPEK 909
Query: 345 DRGRE--RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 402
DR +E +DRD+ ++DR ++ +D +R+ EKDRDKE ++DR +E E+D+D E + DRD
Sbjct: 910 DRDKEPEKDRDKEPEKDRDKEPEKDRDREPEKDRDKEPEKDRDKEPEKDKDKE-PEKDRD 968
Query: 403 RGYSRDRD 410
+ +DRD
Sbjct: 969 KEPEKDRD 976
>gi|395536556|ref|XP_003770280.1| PREDICTED: TRAF3-interacting protein 1 [Sarcophilus harrisii]
Length = 691
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/161 (39%), Positives = 104/161 (64%), Gaps = 25/161 (15%)
Query: 275 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 334
R PSR R+ R +D E S++R +DR++EREKS E +DR R +D DR
Sbjct: 153 RSPSRE-----RKQREEGKDEE-SKQREKDRDKEREKSKE--NDRERHKDP-------DR 197
Query: 335 DRTRDRERERDRGR---ERDRDRTRDRDRGRDRGRDHERDREKDR--DKERDRDRTRERE 389
D+ +D ER+R++ R ER+R+++RD+DRG + R+ ERD+EKD+ D ++++R +ER+
Sbjct: 198 DKVKDGERDRNKNRAKQEREREKSRDKDRG-PKDRELERDKEKDKKNDSGKEKERLKERD 256
Query: 390 RDRDYEVG-DPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 429
R+R+ E G D DRD+ R +D ++ + +HE+D+ E++
Sbjct: 257 REREKEKGKDKDRDKRRERVKDGEHSK---EHEKDKIKEQE 294
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/127 (37%), Positives = 78/127 (61%), Gaps = 12/127 (9%)
Query: 305 REREREKSLELSHDRP-RDRDHRDD-RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 362
+E+E +++ E+ P R+R R++ + + R +DR++ER++ +E DR+R +D DR
Sbjct: 140 KEKEEKRNSEIKDRSPSRERKQREEGKDEESKQREKDRDKEREKSKENDRERHKDPDR-- 197
Query: 363 DRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHER 422
D+ +D ERDR K+R K+ RERE+ RD + G +DR RD++ D + DS E+
Sbjct: 198 DKVKDGERDRNKNRAKQE-----REREKSRDKDRG--PKDRELERDKEKDK-KNDSGKEK 249
Query: 423 DRHGERD 429
+R ERD
Sbjct: 250 ERLKERD 256
>gi|355721028|gb|AES07129.1| small nuclear ribonucleoprotein 70kDa [Mustela putorius furo]
Length = 70
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
H RDM +AYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SG
Sbjct: 2 HERDMHSAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSG 61
Query: 269 RE 270
R+
Sbjct: 62 RD 63
>gi|440297145|gb|ELP89867.1| U1 small nuclear ribonucleoprotein 70 kDa, putative [Entamoeba
invadens IP1]
Length = 388
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 99/222 (44%), Gaps = 41/222 (18%)
Query: 42 LTANLLKLFEPRAPLEYKPPPEKRKCPPLTGMAQFVSHFAEPGDPLYAPPVE-------- 93
L NL LF P P+ PP EK+ P +G++ + E +PP E
Sbjct: 5 LPKNLQSLFIPNEPIATFPPQEKKFYPHYSGISDIFNLIKE------SPPDEATSVLEDP 58
Query: 94 -KAETPVERRARIHKLRLEKG--AEKAAEELKK--YDPHNDPNVSGDPYKTLFVARLSYE 148
K TP+ ++ + L+ K + KA ++ K ++P V+ +P +T+FV + +
Sbjct: 59 KKPFTPIWTKSGLKALKEYKKRDSIKALQDAMKAEWNPTQRTGVTDNPNRTVFVRGVPKD 118
Query: 149 TTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYM 208
E ++K F +G +K +I G K N Y F+E++
Sbjct: 119 VEEGELKNIFWEFGDVKNVIFVKNKKG------------------KRVN----YCFVEFV 156
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGG 250
H D + A ++ D ++ +RV V++ERGR + P ++GG
Sbjct: 157 HHSDAERAARRGDLMRIGEKRVNVEMERGRVDDKFLPTKIGG 198
>gi|297738892|emb|CBI28137.3| unnamed protein product [Vitis vinifera]
Length = 347
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 122/292 (41%), Gaps = 71/292 (24%)
Query: 132 VSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLV 191
++ D +++V L Y TE I++ F YG I V+++
Sbjct: 1 MTIDDDNSIYVGGLPYNATEDSIRKVFNLYGAIV---------------------AVKII 39
Query: 192 TDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGG 251
++ + Y F+ + + R A +GR +DGR V+V+ R R GG
Sbjct: 40 NERGVG-GKCYGFVTFTNPRSAIDAINDMNGRDIDGRIVVVNEVRTR-----------GG 87
Query: 252 LGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREK 311
G E +R S R + RG R + +D DR+ +RSR+ R+RER
Sbjct: 88 RSNF---GRESFRRNSERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERER---- 140
Query: 312 SLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD 371
H+R RD H R RDR DR R++DR E D ++ R+H++D
Sbjct: 141 ----GHERARD-------HDRTRDRFMDRNRDQDRDME---------DNEQEHSRNHDQD 180
Query: 372 REKDRDKERDRDRTRERERDRDYEVGDPD----------RDRGYSRDRDSDY 413
E+D D + DRDR D D + GD D RG S D D DY
Sbjct: 181 WERDHDIDWDRDREMNNTNDHD-KSGDKDEHSKKRNGGWHSRGLSSDSDGDY 231
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 333 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R D D+ RDR R R
Sbjct: 105 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERAR--DHDRTRDRFMDRNR 160
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENY 448
++DRD E D ++ +SR+ D D++R H+ D +R+ + T+ D G D H
Sbjct: 161 DQDRDME----DNEQEHSRNHDQDWER---DHDIDWDRDREMNNTNDHDKSGDKDEHSK- 212
Query: 449 EHHRGYGDHDRYNQYHDDDNDRYDQMEEDD 478
R G H R D D D +DQ+EE D
Sbjct: 213 --KRNGGWHSR-GLSSDSDGDYHDQVEEVD 239
>gi|390358352|ref|XP_001182912.2| PREDICTED: uncharacterized protein LOC753629 [Strongylocentrotus
purpuratus]
Length = 413
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 109/303 (35%), Positives = 138/303 (45%), Gaps = 56/303 (18%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P+V DP+ TLFVARL+ ETTE +++ F YG IK +V
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIK---------------------QVN 80
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
L+ D T + YAFIE+ R + A +AD ++ V VD E T+ W PRRLG
Sbjct: 81 LIRDVVTGFSKQYAFIEFEEERSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRRLG 140
Query: 250 GGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRD----- 304
GGLG + G+ R+ GR++ P R P R DR +RDR+ ER RD
Sbjct: 141 GGLGGKKESGQ---LRFGGRDR-PFRKPIVVQAIR---DRGIERDRDGGIERDRDGGIDR 193
Query: 305 REREREKSLELSHDRPRDRDHRDDR---------------------HHRDRDRTRDRERE 343
S R +DR+ DR R DR RDRE E
Sbjct: 194 SRDRGVDRDRDSGIRDKDREIERDRGRENRDRDRENRDRDRGIERDRDRGIDRDRDREIE 253
Query: 344 RDRGRE-RDR-DRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDR 401
RDRGRE RDR D RDR G+++ D E KDR +E D R R RD E + R
Sbjct: 254 RDRGRENRDREDTNRDRGIGKEKDTDTEDGEIKDRYREYSTDGDRRTGRYRDRERDNRGR 313
Query: 402 DRG 404
DRG
Sbjct: 314 DRG 316
>gi|260790715|ref|XP_002590387.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
gi|229275579|gb|EEN46398.1| hypothetical protein BRAFLDRAFT_216241 [Branchiostoma floridae]
Length = 213
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 27/155 (17%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGK 182
KY P+ V GDP TLFV+ L+ +TTE +++ F +G + R
Sbjct: 43 KYRPNK--QVKGDPRCTLFVSNLNPKTTEDSLEKVFSKFGDLVR---------------- 84
Query: 183 PCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN 242
RLV D T + YAFIEY+ + M A+++A +L+ V VDVE RT+
Sbjct: 85 -----TRLVRDIVTGYSKRYAFIEYVDEKSMWHAHRKAYKMELEQYEVFVDVENSRTLKG 139
Query: 243 WRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGP 277
W PRRLGGGLG ++ G+ R+ GR + P R P
Sbjct: 140 WVPRRLGGGLGGSKESGQ---LRFGGRAR-PFRKP 170
>gi|145501258|ref|XP_001436611.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403752|emb|CAK69214.1| unnamed protein product [Paramecium tetraurelia]
Length = 3975
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 99/161 (61%), Gaps = 13/161 (8%)
Query: 286 REDRHGD--RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDR-------HHRDRDR 336
++DR D +D+++ +ER +D+E+ ++K + + D+ +D+ + DR + +DR
Sbjct: 584 QQDRTSDNEQDKQKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDR 643
Query: 337 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 396
T+D+E+ + + ++R D +D+ + +DR +D E+D++K +D+ D+++ +++++DR
Sbjct: 644 TQDKEQNKQKQQDRTSDNEQDKQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDR---T 700
Query: 397 GDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQED 437
D ++D+ +DR D ++ + + ++DR + + D Q+D
Sbjct: 701 SDNEQDKQKQQDRTQDKEQ-NKQKQQDRTSDNEQDKQQQQD 740
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/136 (25%), Positives = 87/136 (63%), Gaps = 12/136 (8%)
Query: 286 REDRHGDR--DRERSRERGRDREREREKSLELSHDRPRDRDHRDDR-------HHRDRDR 336
++DR D+ D+++ ++R D E++++K + + D+ +++ + DR + +DR
Sbjct: 612 QQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDRTSDNEQDKQQQQDR 671
Query: 337 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 396
T+D+E+++ + ++R D+ +D+ + +DR D+E+D++K +D+ +D+++ +++++DR
Sbjct: 672 TQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDR---T 728
Query: 397 GDPDRDRGYSRDRDSD 412
D ++D+ +DR D
Sbjct: 729 SDNEQDKQQQQDRTQD 744
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/121 (22%), Positives = 77/121 (63%), Gaps = 5/121 (4%)
Query: 269 REQEPSRGPSRSAEPRIREDRHGDR--DRERSRERGRDREREREKSLELSHDRPRDRDHR 326
++Q+ R + + + ++DR D+ D+++ ++R D E++++K + + D+ +++ +
Sbjct: 665 KQQQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQ 724
Query: 327 DDR---HHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
DR + +D+ + +DR +++++ +++ +DRT D ++ R + +D +D+E+D+ K++ R
Sbjct: 725 QDRTSDNEQDKQQQQDRTQDKEQNKQKQQDRTSDNEQDRQKSQDRTQDKEQDKQKQQGRT 784
Query: 384 R 384
+
Sbjct: 785 Q 785
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 34/150 (22%), Positives = 96/150 (64%), Gaps = 5/150 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH---RDRDRTRDRERERDRGR 348
++DR++S++R +D++++++ + + D+ +D+ + DR +D+ + +DR + ++ +
Sbjct: 536 EQDRQKSQDRTQDKQQDKQNQQDRTQDKEQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDK 595
Query: 349 ERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE-VGDPDRDRGYSR 407
++ ++RT+D+++ + + +D D+E+D+ K++DR E+++ + + D ++++ +
Sbjct: 596 QKQQERTQDKEQNKQKQQDRTSDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQ 655
Query: 408 DRDSDYDRIDSKHERDRHGERDYDPTDQED 437
DR SD ++ D + ++DR +++ D Q+D
Sbjct: 656 DRTSDNEQ-DKQQQQDRTQDKEQDKQKQQD 684
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/205 (19%), Positives = 103/205 (50%), Gaps = 56/205 (27%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
++D+++ ++R D+E++++K + + D +D+ + ++RT+D+E+ + + ++R
Sbjct: 564 EQDKQKQQDRTSDKEQDKQKQQDRTSDNEQDK-------QKQQERTQDKEQNKQKQQDRT 616
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDS 411
D+ +D+ + +DR D+E+D++K +D+ +D+++ +++++DR D ++D+ +DR
Sbjct: 617 SDKEQDKQKQQDRTSDNEQDKQKQQDRTQDKEQNKQKQQDR---TSDNEQDKQQQQDRTQ 673
Query: 412 DYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGDHDRYNQYHDDDNDRY 471
D ++ D + ++DR +++ D Q+D
Sbjct: 674 DKEQ-DKQKQQDRTSDKEQDKQKQQD---------------------------------- 698
Query: 472 DQMEEDDYRYDRATSESRDKERTRD 496
R + +DK++ +D
Sbjct: 699 -----------RTSDNEQDKQKQQD 712
>gi|359484387|ref|XP_002281678.2| PREDICTED: uncharacterized protein LOC100245744 [Vitis vinifera]
Length = 399
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 119/285 (41%), Gaps = 71/285 (24%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+++V L Y TE I++ F YG I V+++ ++
Sbjct: 60 SIYVGGLPYNATEDSIRKVFNLYGAIV---------------------AVKIINERGVG- 97
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
+ Y F+ + + R A +GR +DGR V+V+ R R GG
Sbjct: 98 GKCYGFVTFTNPRSAIDAINDMNGRDIDGRIVVVNEVRTR-----------GGRSNF--- 143
Query: 259 GEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHD 318
G E +R S R + RG R + +D DR+ +RSR+ R+RER H+
Sbjct: 144 GRESFRRNSERGMDWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERER--------GHE 195
Query: 319 RPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK 378
R RD H R RDR DR R++DR E D ++ R+H++D E+D D
Sbjct: 196 RARD-------HDRTRDRFMDRNRDQDRDME---------DNEQEHSRNHDQDWERDHDI 239
Query: 379 ERDRDRTRERERDRDYEVGDPDR----------DRGYSRDRDSDY 413
+ DRDR D D + GD D RG S D D DY
Sbjct: 240 DWDRDREMNNTNDHD-KSGDKDEHSKKRNGGWHSRGLSSDSDGDY 283
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/150 (40%), Positives = 83/150 (55%), Gaps = 19/150 (12%)
Query: 333 DRDRTRDRERE----RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
D DR RDRER+ +D R+R+ DR+RD DR R+RG HER R D D+ RDR R R
Sbjct: 157 DWDRGRDRERDYGHDKDHFRDRNIDRSRDHDRERERG--HERAR--DHDRTRDRFMDRNR 212
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENY 448
++DRD E D ++ +SR+ D D++R H+ D +R+ + T+ D G D H
Sbjct: 213 DQDRDME----DNEQEHSRNHDQDWER---DHDIDWDRDREMNNTNDHDKSGDKDEHSK- 264
Query: 449 EHHRGYGDHDRYNQYHDDDNDRYDQMEEDD 478
R G H R D D D +DQ+EE D
Sbjct: 265 --KRNGGWHSR-GLSSDSDGDYHDQVEEVD 291
>gi|390355488|ref|XP_790452.3| PREDICTED: uncharacterized protein LOC585534 [Strongylocentrotus
purpuratus]
Length = 405
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 106/295 (35%), Positives = 140/295 (47%), Gaps = 48/295 (16%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P+V DP+ TLFVARL+ ETTE +++ F YG IK +V
Sbjct: 42 PSVDNDPHLTLFVARLNPETTEKTLRKTFSKYGDIK---------------------QVN 80
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
L+ D T + YAFIE+ R + A +AD ++ V VD E T+ W PRRLG
Sbjct: 81 LIRDVVTGFSKQYAFIEFEEERSARRARAEADQSVIEEHIVFVDWECEHTLDGWIPRRLG 140
Query: 250 GGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSR---------- 299
GGLG + G+ R+ GR++ P R P R DR +RDR+
Sbjct: 141 GGLGGKKESGQ---LRFGGRDR-PFRKPIVVQAIR---DRGIERDRDEGIGRSRDRGVDR 193
Query: 300 -----ERGRDREREREKSLELSHDRPRDRDHR---DDRHHRDRDRTRDRERERDRGRE-R 350
R +DRE ER++ E +RD + R DR RD+ ERDRGRE R
Sbjct: 194 DRDSGIRDKDREIERDRGRENRDRDRENRDRDRGIERDRDRGIDRDRDKGIERDRGRENR 253
Query: 351 DRDRT-RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 404
DR+ T R+R G+++ D E KDRD+E D R R RD E RDRG
Sbjct: 254 DREDTDRERGLGKEKDTDTEDGEIKDRDREYSTDGDRRTGRYRDIERDHRARDRG 308
>gi|221052874|ref|XP_002261160.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
gi|194247164|emb|CAQ38348.1| hypothetical protein, conserved in Plasmodium species [Plasmodium
knowlesi strain H]
Length = 971
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 74/125 (59%), Gaps = 10/125 (8%)
Query: 291 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 350
+RDR R ER R RE ER++ E DRPR+ + RDR R+ ER+R R ER
Sbjct: 671 AERDRPREAERDRPREAERDRPREAERDRPREAE---------RDRPREAERDRQREAER 721
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DR R +RDR R+ RD +R+ E+DR +E +RDR RE ERDR E + DR R RDR
Sbjct: 722 DRQREAERDRPREAERDRQREAERDRQREAERDRQREAERDRQREA-ERDRQREAERDRQ 780
Query: 411 SDYDR 415
+ +R
Sbjct: 781 REAER 785
>gi|124505987|ref|XP_001351591.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
gi|23504518|emb|CAD51398.1| Ser/Arg-rich splicing factor, putative [Plasmodium falciparum 3D7]
Length = 308
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 133/303 (43%), Gaps = 56/303 (18%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L + +L ++T+ S ++ +F+ +G IK V L D T +
Sbjct: 13 SLLIRKLKFDTSPSIVREKFKRFGAIK---------------------DVYLPIDYYTKE 51
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVPNWRPRRLGGGLGTTRV 257
PRG+ F+E+ +D + A K+ +G ++DG R+ V V ++GR+ P + GG +
Sbjct: 52 PRGFGFVEFYDAKDAEQALKEMNGSEIDGSRIEVFVAQKGRSDPRHMRYKEKGGYAYRKN 111
Query: 258 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 317
++ +RY + R+G R++ R R R +ER R +S S+
Sbjct: 112 PDNKIRRRYISKSNS----------------RYGSYSRDKIRRRERSKERFRYRS---SY 152
Query: 318 DRPRD--RDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKD 375
DR RD R + H + D+ RDR +R R R R+ + R RD+ R + R
Sbjct: 153 DRKMSSYRD-RKNYHMKSYDKYRDRNHDRSLSR-RSREYRNNTSRYRDKRRYDKYYRSTS 210
Query: 376 RDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQ 435
R +R +R+ +Y+ +S D SD R SKH R H R +
Sbjct: 211 RRA------SRHEKRNENYKSK-----YNHSNDDYSDETRNSSKHSRKEHVSRSISFNSE 259
Query: 436 EDD 438
+DD
Sbjct: 260 KDD 262
>gi|198465678|ref|XP_002135021.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
gi|198150268|gb|EDY73648.1| GA23474 [Drosophila pseudoobscura pseudoobscura]
Length = 1099
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 89/160 (55%), Gaps = 15/160 (9%)
Query: 271 QEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD------ 324
+EP R RS E ++R ++R+RS+ER R +ER+R K + S +RP+ ++
Sbjct: 424 KEPERKRERSKERFRSKERQRSKERQRSKERLRSKERQRSKERQRSKERPKSKERQRSRE 483
Query: 325 ---------HRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKD 375
++ + ++R R+++R++ +DR R +DR R++DR R ++R R ER R K
Sbjct: 484 RQRSKERIRSKERQRSKERQRSKERQKSKDRQRSKDRQRSKDRQRSKERQRSKERQRSKA 543
Query: 376 RDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
R ++R R++ER R +D V + RDR R R + R
Sbjct: 544 RLYSKERLRSKERARSKDKPVVEIKRDRSKDRQRSKERKR 583
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 287 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDR----HHRDRDRTRDRER 342
+DR +DR+RS+ER R +ER+R K+ S +R R ++ + RDR++DR+R
Sbjct: 518 KDRQRSKDRQRSKERQRSKERQRSKARLYSKERLRSKERARSKDKPVVEIKRDRSKDRQR 577
Query: 343 ERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR-------DRTRERERDRD 393
++R R D+ +++RD + R R ER R K+R + +DR R++ER+R +D
Sbjct: 578 SKERKRSVDKAPSKERDMSKGRQRSKERQRSKERRRSKDRGQQSNEKKRSKERQRSKD 635
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 61/98 (62%), Gaps = 7/98 (7%)
Query: 298 SRERGRDREREREK---SLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER--DR 352
S+ER R +ER R K +E+ DR +DR R R D+ +ER+ +GR+R +R
Sbjct: 547 SKERLRSKERARSKDKPVVEIKRDRSKDR-QRSKERKRSVDKAPSKERDMSKGRQRSKER 605
Query: 353 DRTRDRDRGRDRG-RDHERDREKDRDKERDRDRTRERE 389
R+++R R +DRG + +E+ R K+R + +DR R++ER+
Sbjct: 606 QRSKERRRSKDRGQQSNEKKRSKERQRSKDRQRSKERQ 643
>gi|260805176|ref|XP_002597463.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
gi|229282728|gb|EEN53475.1| hypothetical protein BRAFLDRAFT_122620 [Branchiostoma floridae]
Length = 366
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/97 (56%), Positives = 65/97 (67%), Gaps = 11/97 (11%)
Query: 182 KPCDEKVRLVTDKETNK--PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
KP + ++ K+ K P YA AAYK ADG+K+DGRRVLVDVERGRT
Sbjct: 16 KPMQAGLSILLSKDVCKDLPTPYAH--------PSAAYKHADGKKIDGRRVLVDVERGRT 67
Query: 240 VPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRG 276
V WRPRRLGGGLG TR GG EVN ++SGRE +P+RG
Sbjct: 68 VKGWRPRRLGGGLGGTRKGGPEVNVKHSGRE-DPTRG 103
>gi|432897351|ref|XP_004076429.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryzias latipes]
Length = 220
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 59/125 (47%), Gaps = 27/125 (21%)
Query: 123 KYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRL--ICNSCNGGDSSRD 180
+Y P+ V GDP T+FVARL+ +T+E K+++ F YG IKRL + + G
Sbjct: 38 RYKPNK--GVVGDPLLTVFVARLNPQTSEEKLQQIFSKYGDIKRLRLVRDIVTGFS---- 91
Query: 181 GKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTV 240
+GY FIEY R + A + A+ +D + VD E+ RT+
Sbjct: 92 -------------------KGYGFIEYKEERSLTRARRDANKLVVDQHELFVDFEQERTL 132
Query: 241 PNWRP 245
W P
Sbjct: 133 KGWIP 137
>gi|195375174|ref|XP_002046378.1| GJ12538 [Drosophila virilis]
gi|194153536|gb|EDW68720.1| GJ12538 [Drosophila virilis]
Length = 1083
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/148 (36%), Positives = 81/148 (54%), Gaps = 8/148 (5%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDR 346
+R ++R RS+ER R +ER R K S ++PR +D HR R +R R +ER+R +
Sbjct: 475 ERQRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRSVERPRSKERQRSK 534
Query: 347 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER--ERDRDYEVGDPDRDRG 404
R R ++R R ++R R + R ++R+K+R ER R + +ER ER R E ++R
Sbjct: 535 ERLRSKERVRSKERQRSKERVRSKERQKERSAERQRSKVKERSKERQRSKERVQRSKERQ 594
Query: 405 YSRDRDSDYDRIDSKH-----ERDRHGE 427
S++R DR SK ER R GE
Sbjct: 595 RSKERLRSKDRQRSKERQKSKERPRQGE 622
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 27/224 (12%)
Query: 279 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH-RDDRHHRDRDRT 337
RS E + + R G ++R+RS+ER +R+R +E+ L +R + +D R + ++R
Sbjct: 408 RSKERQRSKQRAGSKERKRSKERRSERQRSKERQRSLGKERQKSKDRARSKERQKSKERQ 467
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG 397
R +ER ++R R ++R R+++R R ++R R ER R K++ + +DR R++ER+R V
Sbjct: 468 RSKERPKERQRSKERPRSKERQRSKERLRSKERLRSKEKPRSKDRHRSKERQRS----VE 523
Query: 398 DP-DRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEHHRGYGD 456
P ++R S++R +R+ SK ER R ER Q++ + E R
Sbjct: 524 RPRSKERQRSKERLRSKERVRSK-ERQRSKERVRSKERQKE--------RSAERQRSKV- 573
Query: 457 HDRYNQYHDDDNDRYDQMEEDDYRYDRATSESRDKERTRDLDRE 500
+R + + R R+ R KER R DR+
Sbjct: 574 -----------KERSKERQRSKERVQRSKERQRSKERLRSKDRQ 606
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 52/83 (62%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
++R+RS+ER R +ER++E+S E + ++R R R+++R+R ++R R +D
Sbjct: 545 SKERQRSKERVRSKERQKERSAERQRSKVKERSKERQRSKERVQRSKERQRSKERLRSKD 604
Query: 352 RDRTRDRDRGRDRGRDHERDREK 374
R R+++R + ++R R E +E+
Sbjct: 605 RQRSKERQKSKERPRQGEVAKER 627
>gi|70941972|ref|XP_741209.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56519442|emb|CAH74487.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 635
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 20/118 (16%)
Query: 300 ERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRD 359
E RDR RE DR R+R+ DR R+RE +RDR RE DRDR R+ D
Sbjct: 515 EFDRDRNRE--------FDRDRNREF---------DRDRNREFDRDRNREMDRDRNREMD 557
Query: 360 RGRDRGRDHERDREKDRDKER--DRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
R R+R D +R+RE DRD+ R DRDR RE +RDR+ E D DR+R + RDR+ ++DR
Sbjct: 558 RDRNREMDRDRNREMDRDRNREMDRDRNREVDRDRNREF-DRDRNREFDRDRNREFDR 614
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 19/111 (17%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
DR+ + DR+R+RE RDR RE + RDR +R+ DR R+RE +RDR
Sbjct: 527 DRNREFDRDRNREFDRDRNREMD----------RDR-------NREMDRDRNREMDRDRN 569
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKER--DRDRTRERERDRDYEV 396
RE DRDR R+ DR R+R D +R+RE DRD+ R DRDR RE +RDR+ E+
Sbjct: 570 REMDRDRNREMDRDRNREVDRDRNREFDRDRNREFDRDRNREFDRDRNREM 620
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 98/190 (51%), Gaps = 31/190 (16%)
Query: 262 VNQRYSGREQEPSRGPSRSAEPRIREDRH--GDRDRERSRERGRDREREREKSLELSHDR 319
N + + S+G S P R H + ++ RERG+D++ +++ ++
Sbjct: 419 TNSHNTDHNHDKSKGMSNHHTPAKRHSLHIPSSHNHDKKRERGKDKDEKQDSHIDG---- 474
Query: 320 PRDRDHRDDRHHRDRDRTRDRERERDRGRE------------------RDRDRTRDRDRG 361
H++ RD+ R R+RE +RDR RE RDR+R DRDR
Sbjct: 475 -----HKETDSERDKKRARNREMDRDRNREMDRDRNRDFDRDRNREFDRDRNREFDRDRN 529
Query: 362 RDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE 421
R+ RD R+ ++DR++E DRDR RE +RDR+ E+ D DR+R RDR+ + DR D E
Sbjct: 530 REFDRDRNREFDRDRNREMDRDRNREMDRDRNREM-DRDRNREMDRDRNREMDR-DRNRE 587
Query: 422 RDRHGERDYD 431
DR R++D
Sbjct: 588 VDRDRNREFD 597
>gi|225462520|ref|XP_002264268.1| PREDICTED: uncharacterized protein LOC100266959 [Vitis vinifera]
Length = 902
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 41/183 (22%)
Query: 289 RHGDRDRERSR-----ERGRDRER--------EREKSLELSH-DRPRDRDHR-DDRHHRD 333
+H +DR++SR RG+DRER EREK + S DR R+ R +DR R+
Sbjct: 45 KHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDERE 104
Query: 334 RDRTRDRERERDRGRERDRDRTRDRDRGR-------------------DRGRDHERDREK 374
+DR RD+ RE+D RE+ RD+ R+RD+ R DRGRD ER +EK
Sbjct: 105 KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEK 164
Query: 375 DRDK----ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK--HERDRHGER 428
+RD+ E++RDRT++R+R+++ E DR++ D+D D D ID + ER R ER
Sbjct: 165 NRDRDKEREKERDRTKDRDREKEKEKS-KDREKERENDKDRDRDAIDKEKGKERIRDKER 223
Query: 429 DYD 431
+ D
Sbjct: 224 EAD 226
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 97/150 (64%), Gaps = 19/150 (12%)
Query: 286 REDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD------DRHHRDRDRTRD 339
R++R DR+R++ RE+ DRE+ R+K +R RD+D +D R+ D+ D
Sbjct: 100 RDEREKDRNRDKVREKDYDREKYRDK------ERERDKDRKDRGKEKEREREREVDKESD 153
Query: 340 RERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDP 399
R R+++RG+E++RDR ++R++ RDR +D RDREK+++K +DR++ RE ++DRD + D
Sbjct: 154 RGRDKERGKEKNRDRDKEREKERDRTKD--RDREKEKEKSKDREKERENDKDRDRDAIDK 211
Query: 400 DRDRGYSRDRDSDYDRIDSKHERDRHGERD 429
++ + RD++ + D +RDR+ +RD
Sbjct: 212 EKGKERIRDKEREAD-----QDRDRYKDRD 236
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
DR DRDRE+ +E+ +DRE+ERE +D+ RDRD D + ++R RD+ERE D+
Sbjct: 177 DRTKDRDREKEKEKSKDREKERE------NDKDRDRDAID--KEKGKERIRDKEREADQ- 227
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRD 377
DRDR +DRD+G + RD + +DRD
Sbjct: 228 ---DRDRYKDRDKGSRKNRDEDGGDNRDRD 254
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 89/138 (64%), Gaps = 11/138 (7%)
Query: 295 RERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDR 354
R++ RER +DR +++ E +R R+ D DR RD++R +++ R+RD+ RE++RDR
Sbjct: 123 RDKERERDKDR---KDRGKEKEREREREVDKESDR-GRDKERGKEKNRDRDKEREKERDR 178
Query: 355 TRDRDRGRDRGRDHERDREKDRDKERDRD-----RTRERERDRDYEVGDPDRDRGYSRDR 409
T+DRDR +++ + +R++E++ DK+RDRD + +ER RD++ E D DRDR RD+
Sbjct: 179 TKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKEREA-DQDRDRYKDRDK 237
Query: 410 DSDYDR-IDSKHERDRHG 426
S +R D RDR G
Sbjct: 238 GSRKNRDEDGGDNRDRDG 255
>gi|296090475|emb|CBI40671.3| unnamed protein product [Vitis vinifera]
Length = 944
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 71/183 (38%), Positives = 103/183 (56%), Gaps = 41/183 (22%)
Query: 289 RHGDRDRERSR-----ERGRDRER--------EREKSLELSH-DRPRDRDHR-DDRHHRD 333
+H +DR++SR RG+DRER EREK + S DR R+ R +DR R+
Sbjct: 45 KHRSKDRKKSRREEKDHRGKDRERSKAGDGLKEREKETKDSEKDRVTSRERRKEDRDERE 104
Query: 334 RDRTRDRERERDRGRERDRDRTRDRDRGR-------------------DRGRDHERDREK 374
+DR RD+ RE+D RE+ RD+ R+RD+ R DRGRD ER +EK
Sbjct: 105 KDRNRDKVREKDYDREKYRDKERERDKDRKDRGKEKEREREREVDKESDRGRDKERGKEK 164
Query: 375 DRDK----ERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK--HERDRHGER 428
+RD+ E++RDRT++R+R+++ E DR++ D+D D D ID + ER R ER
Sbjct: 165 NRDRDKEREKERDRTKDRDREKEKEKS-KDREKERENDKDRDRDAIDKEKGKERIRDKER 223
Query: 429 DYD 431
+ D
Sbjct: 224 EAD 226
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 74/225 (32%), Positives = 116/225 (51%), Gaps = 48/225 (21%)
Query: 269 REQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD- 327
++ E R SR R++R DR+R++ RE+ DRE+ R+K +R RD+D +D
Sbjct: 83 KDSEKDRVTSRERRKEDRDEREKDRNRDKVREKDYDREKYRDK------ERERDKDRKDR 136
Query: 328 -----DRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR 382
R+ D+ DR R+++RG+E++RDR ++R++ RDR +D RDREK+++K +DR
Sbjct: 137 GKEKEREREREVDKESDRGRDKERGKEKNRDRDKEREKERDRTKD--RDREKEKEKSKDR 194
Query: 383 DRTRERERDRDYEVGD----------------------PDRDRGYSRDRDSDYDRI---- 416
++ RE ++DRD + D DRD+G ++RD +DR
Sbjct: 195 EKERENDKDRDRDAIDKEKGKERIRDKEREADQDRDRYKDRDKGSRKNRDEGHDRSKDGG 254
Query: 417 -DSKHERDRHGERDYDPTDQ-------EDDRGWYDHHENYEHHRG 453
D K + D RD D T Q EDD +H +N E G
Sbjct: 255 KDDKLKLDGGDNRDRDVTKQGRGSHHDEDDSRAIEHEKNAEGASG 299
>gi|301610223|ref|XP_002934650.1| PREDICTED: hypothetical protein LOC100495464 [Xenopus (Silurana)
tropicalis]
Length = 559
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/149 (45%), Positives = 96/149 (64%), Gaps = 8/149 (5%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSH--DRPRDRDHRDDRHHRDRDRTRDRERERD 345
DR DRDR R RG+DR R RE + S +R +DRD R+ +R +DR R E +R+
Sbjct: 410 DRGQDRDRSREGYRGQDRARSREGERDRSREGNRGQDRD-RNREGYRGQDRDRSPEGDRE 468
Query: 346 RGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR-G 404
R RER+RDR+R+ +RG+DR R+ E R +DRD+ R+ DR R +E++R D DR+R G
Sbjct: 469 RSRERNRDRSREGNRGQDRDRNQEGYRGQDRDRSREGDRERSKEKNRG-RGQDRDRNREG 527
Query: 405 Y-SRDRDSDYDRIDSK-HERDR-HGERDY 430
Y +DRD D +R ++ ERDR H +RD+
Sbjct: 528 YRGQDRDRDRNRGQNRSQERDRSHQDRDH 556
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 80/140 (57%), Gaps = 18/140 (12%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGR 348
R G+RDR R RG+DR+R RE + RDR DR R R+R RDR RE +RG+
Sbjct: 431 REGERDRSREGNRGQDRDRNREGY----RGQDRDRSPEGDRE-RSRERNRDRSREGNRGQ 485
Query: 349 ERDRDRT------RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRD 402
+RDR++ RDR R DR ER +EK+R + +DRDR RE R +D D DR+
Sbjct: 486 DRDRNQEGYRGQDRDRSREGDR----ERSKEKNRGRGQDRDRNREGYRGQDR---DRDRN 538
Query: 403 RGYSRDRDSDYDRIDSKHER 422
RG +R ++ D D H+R
Sbjct: 539 RGQNRSQERDRSHQDRDHKR 558
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 65/155 (41%), Positives = 86/155 (55%), Gaps = 20/155 (12%)
Query: 303 RDREREREKSLELSHDRPRDRDHRDDRH---HRDRDRTRDRERERDRGRERDRDRTRDRD 359
+D+ER +EK S DR RDR DR +R +DR R RE ERDR RE +R + RDR+
Sbjct: 392 KDKERNKEKR-SRSKDRQRDRGQDRDRSREGYRGQDRARSREGERDRSREGNRGQDRDRN 450
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSK 419
R RG+D +DR E DR+R+RER RDR E +RG RDR+ + R
Sbjct: 451 REGYRGQD------RDRSPEGDRERSRERNRDRSREG-----NRGQDRDRNQEGYR---G 496
Query: 420 HERDRHGERDYDPTDQEDDRG-WYDHHENYEHHRG 453
+RDR E D + + +E +RG D N E +RG
Sbjct: 497 QDRDRSREGDRERS-KEKNRGRGQDRDRNREGYRG 530
>gi|50417226|gb|AAH78245.1| Rbmx2 protein [Danio rerio]
Length = 358
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/102 (50%), Positives = 65/102 (63%), Gaps = 7/102 (6%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
DR +++R RDRE ER+ E DR R RD R RD +DRERERD GR+RD
Sbjct: 244 DRRHAETQQRERDREGERDGDKERERDRGRQRDG-----GRQRDGEKDRERERDGGRQRD 298
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
+R R+RD GR RD ERDRE++RD R RD R+RE++RD
Sbjct: 299 GERQRERDGGRQ--RDGERDRERERDGGRQRDGDRDREQERD 338
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 54/109 (49%), Positives = 66/109 (60%), Gaps = 10/109 (9%)
Query: 327 DDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 386
D RH + R RDRE ERD +ER+RDR R RD GR RD E+DRE++RD R RD R
Sbjct: 244 DRRHAETQQRERDREGERDGDKERERDRGRQRDGGRQ--RDGEKDRERERDGGRQRDGER 301
Query: 387 ERERD----RDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 431
+RERD RD E D +R+R R RD D DR + ERD +RD +
Sbjct: 302 QRERDGGRQRDGER-DRERERDGGRQRDGDRDR---EQERDGGRQRDVE 346
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 64/104 (61%), Gaps = 4/104 (3%)
Query: 279 RSAEPRIRE-DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDR 334
R AE + RE DR G+RD ++ RER R R+R+ + + DR R+RD RD R+R
Sbjct: 246 RHAETQQRERDREGERDGDKERERDRGRQRDGGRQRDGEKDRERERDGGRQRDGERQRER 305
Query: 335 DRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDK 378
D R R+ ERDR RERD R RD DR R++ RD R R+ +RD+
Sbjct: 306 DGGRQRDGERDRERERDGGRQRDGDRDREQERDGGRQRDVERDQ 349
>gi|390363527|ref|XP_796157.3| PREDICTED: uncharacterized protein LOC591504 [Strongylocentrotus
purpuratus]
Length = 831
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 75/127 (59%), Gaps = 11/127 (8%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
DR DR ++ R R DRERERE LE D+ RD++H D+D RDRE +RDR
Sbjct: 520 DRERDRYCDKERNRDCDREREREGDLEQEQDQERDQEH-------DQDHERDREWDRDR- 571
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 407
+ R D++RGR+R + E DRE +RD++ R+R +D++ + DPDR++G +
Sbjct: 572 ---ETKRNGDKERGRERETEKEDDREMERDRDSKNHMERDRTQDKEEKDRDPDREKGKEQ 628
Query: 408 DRDSDYD 414
+R D +
Sbjct: 629 ERTRDSE 635
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 11/101 (10%)
Query: 332 RDRDRTRDRERERDRGRERDRD----RTRDRDRGRDRGRDHERDREKDRDKERDRDRTRE 387
R+RDR D+ER RD RER+R+ + +D++R ++ +DHERDRE DRD+E R+ +E
Sbjct: 521 RERDRYCDKERNRDCDREREREGDLEQEQDQERDQEHDQDHERDREWDRDRETKRNGDKE 580
Query: 388 RERDRDYEVGDPDRDRGYSRDRDS----DYDRIDSKHERDR 424
R R+R+ E D DR RDRDS + DR K E+DR
Sbjct: 581 RGRERETEKED---DREMERDRDSKNHMERDRTQDKEEKDR 618
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 18/97 (18%)
Query: 288 DRHGDRDRERSR----ERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERE 343
DR DRDRE R ERGR+RE E+E DR +RD RD ++H +RDRT+D+E
Sbjct: 564 DREWDRDRETKRNGDKERGRERETEKED------DREMERD-RDSKNHMERDRTQDKE-- 614
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER 380
E+DRD R++ + ++R RD E D ++E+
Sbjct: 615 -----EKDRDPDREKGKEQERTRDSEPSLNGDENEEK 646
>gi|195490501|ref|XP_002093167.1| GE20934 [Drosophila yakuba]
gi|194179268|gb|EDW92879.1| GE20934 [Drosophila yakuba]
Length = 1080
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
+R +DR RSRER R +ER+ K+ +LS DR +D + ++R R+ +R+R ++R
Sbjct: 539 ERQRSKDRHRSRERQRSKERQLSKNRQLSKDRQLSKDRQG---LKERQRSNERKRSKERQ 595
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDP 399
+DR R+R+R +DR R ER R K+ + +DR R++ER+R R+ +P
Sbjct: 596 HSKDRQRSRERQPSKDRQRSKERQRSKEPQQSKDRQRSKERQRSRERPAKEP 647
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 67/111 (60%), Gaps = 9/111 (8%)
Query: 295 RERSRERGRDREREREKSLELSHDRPRDRD------HRDDRH---HRDRDRTRDRERERD 345
R RSRER + R E S++ H + R+R + +RH +DR R++++ R RD
Sbjct: 362 RSRSRERKDTKSRPLEASIDSRHHKARERSAATPPRKQPERHRERSKDRQRSKEKHRSRD 421
Query: 346 RGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEV 396
R R ++R R+++R R ++R R ER R K+R + +++ R++ER+R R +V
Sbjct: 422 RLRSKERQRSKERQRSKERPRSRERQRSKERQRSKEKQRSKERQRSRSKDV 472
>gi|68448493|ref|NP_001020337.1| RNA-binding motif protein, X-linked 2 [Danio rerio]
gi|67678309|gb|AAH96985.1| RNA binding motif protein, X-linked 2 [Danio rerio]
Length = 434
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/109 (51%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH---RDRDRTRDRERER 344
DR RD ER RER R+R+ EK E D R RD R R RD RDRERER
Sbjct: 270 DRGRQRDGERQRERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDGERDRERER 329
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
D GR+RD DR R+++R R RD ERD+E++RD R RD R+RER+RD
Sbjct: 330 DGGRQRDGDRDREQERDGGRQRDVERDQERERDGGRQRDGERDRERERD 378
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 41/105 (39%), Gaps = 26/105 (24%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+F+ YE TE I F YG I + LV DK+T K
Sbjct: 38 VFIGGFPYELTEGDIICVFSQYGEIA---------------------NINLVRDKKTGKS 76
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
+G+ F+ Y R A +G K+ GR + VD V N+R
Sbjct: 77 KGFCFLCYEDQRSTILAVDNFNGIKIKGRTIRVD-----HVANYR 116
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 51/110 (46%), Positives = 66/110 (60%), Gaps = 16/110 (14%)
Query: 334 RDRTRDR--------ERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRT 385
++R RDR +RERD GR+RD ++ R+R+R R RD ER RE+D ++RD +R
Sbjct: 265 KERERDRGRQRDGERQRERDGGRQRDGEKDRERERDGGRQRDGERQRERDGGRQRDGERD 324
Query: 386 RERERDRDYEVGDPDRDRGYSRD--RDSDYDRIDSKHERD----RHGERD 429
RERERD + D DRDR RD R D +R D + ERD R GERD
Sbjct: 325 RERERDGGRQR-DGDRDREQERDGGRQRDVER-DQERERDGGRQRDGERD 372
>gi|221057297|ref|XP_002259786.1| Arg-rich splicing factor [Plasmodium knowlesi strain H]
gi|193809858|emb|CAQ40562.1| Arg-rich splicing factor, putative [Plasmodium knowlesi strain H]
Length = 327
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 58/115 (50%), Gaps = 22/115 (19%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L + +L Y+T+ S ++ +F+ +G IK V L D T +
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKRFGAIK---------------------DVYLPIDYYTKE 51
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVPNWRPRRLGGGL 252
PRG+ F+E+ +D + A K+ +G ++DG RV V V ++GR+ P + GG+
Sbjct: 52 PRGFGFVEFYDPKDAEVALKEMNGAEIDGNRVEVFVAQKGRSDPRVMRYKEKGGI 106
>gi|32398853|emb|CAD98563.1| splicing factor, possible [Cryptosporidium parvum]
Length = 330
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK 194
DP ++L + L ++T S ++REFE +G I+ V L D
Sbjct: 10 DPRRSLLIRSLRFDTPTSLVRREFERFGAIR---------------------DVYLPLDY 48
Query: 195 ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVP 241
+ +PRG+ F+EY+ D +AA ++ DG LDG + V + GR P
Sbjct: 49 RSRRPRGFGFVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSP 96
>gi|357455535|ref|XP_003598048.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487096|gb|AES68299.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 629
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 324 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 359
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.6 bits (109), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 288 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 337
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 380
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|357455533|ref|XP_003598047.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487095|gb|AES68298.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 626
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 324 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 359
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 288 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 337
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 380
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|67623223|ref|XP_667894.1| splicing factor [Cryptosporidium hominis TU502]
gi|54659062|gb|EAL37659.1| splicing factor [Cryptosporidium hominis]
Length = 330
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK 194
DP ++L + L ++T S ++REFE +G I+ V L D
Sbjct: 10 DPRRSLLIRSLRFDTPTSLVRREFERFGAIR---------------------DVYLPLDY 48
Query: 195 ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVP 241
+ +PRG+ F+EY+ D +AA ++ DG LDG + V + GR P
Sbjct: 49 RSRRPRGFGFVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSP 96
>gi|357455537|ref|XP_003598049.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355487097|gb|AES68300.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 627
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 324 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 359
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 288 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 337
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 380
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|156094342|ref|XP_001613208.1| Ser/Arg-rich splicing factor [Plasmodium vivax Sal-1]
gi|148802082|gb|EDL43481.1| Ser/Arg-rich splicing factor, putative [Plasmodium vivax]
Length = 328
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L + +L Y+T+ S ++ +F+ YG IK V L D T +
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKYGAIK---------------------DVYLPIDYYTKE 51
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVP 241
PRG+ F+E+ +D + A K+ +G ++DG R+ V V ++GR+ P
Sbjct: 52 PRGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDP 95
>gi|357438349|ref|XP_003589450.1| Splicing factor U2af large subunit B [Medicago truncatula]
gi|355478498|gb|AES59701.1| Splicing factor U2af large subunit B [Medicago truncatula]
Length = 611
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/92 (47%), Positives = 52/92 (56%), Gaps = 7/92 (7%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
D DRE SR R ++RE REK R R++ R R+ ER RDR ER
Sbjct: 52 DNDRESSRSREKERENGREKE---RKRDKGRDRDRSRDRDREKSRDRESERSRDRESERS 108
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
RDR RDR+R RDRGRD E K +D+ERDRD
Sbjct: 109 RDRVRDRERSRDRGRDSE----KSKDRERDRD 136
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
Query: 324 DHRDDRHHRDRDR--TRDRERERDRGRE----------------------RDRDRTRDRD 359
D + + RD DR +R RE+ER+ GRE RDR+ R RD
Sbjct: 43 DSKTNLGSRDNDRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDRESERSRD 102
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
R +R RD RDRE+ RD+ RD +++++RERDRD E
Sbjct: 103 RESERSRDRVRDRERSRDRGRDSEKSKDRERDRDGE 138
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 57/105 (54%), Gaps = 31/105 (29%)
Query: 288 DRHGDRDRERSRERGRDREREREKSL----------ELSHDRPRDRDHRDDRHHRDRDRT 337
DR R RE+ RE GR++ER+R+K E S DR + +R+
Sbjct: 54 DRESSRSREKERENGREKERKRDKGRDRDRSRDRDREKSRDR-------------ESERS 100
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKER 380
RDRE ER R DR RDR+R RDRGRD E +DRE+DRD E+
Sbjct: 101 RDRESERSR------DRVRDRERSRDRGRDSEKSKDRERDRDGEK 139
>gi|66475620|ref|XP_627626.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
gi|46229295|gb|EAK90144.1| RRM domain containing protein; T22E16.120 Sc35-like splicing factor
[Cryptosporidium parvum Iowa II]
Length = 344
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 22/108 (20%)
Query: 135 DPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDK 194
DP ++L + L ++T S ++REFE +G I+ V L D
Sbjct: 24 DPRRSLLIRSLRFDTPTSLVRREFERFGAIR---------------------DVYLPLDY 62
Query: 195 ETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVP 241
+ +PRG+ F+EY+ D +AA ++ DG LDG + V + GR P
Sbjct: 63 RSRRPRGFGFVEYVEEEDARAALEKMDGATLDGVTINVTFAQEGRKSP 110
>gi|307109660|gb|EFN57897.1| hypothetical protein CHLNCDRAFT_141933 [Chlorella variabilis]
Length = 505
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 23/127 (18%)
Query: 119 EELKKYDPHN-DPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDS 177
EE + Y P P + KT++V +L Y+T E +++ FE+YG +
Sbjct: 12 EEGETYSPRGYIPRPGHETNKTIYVGQLRYDTDERTVRKWFEAYGTVV------------ 59
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
V+L+ DKET + +G+ F+ + RD + A A GR LDG + V++ G
Sbjct: 60 ---------TVKLIYDKETGRSKGFGFVSFEDDRDARDALNDAGGRDLDGAAIKVNIAHG 110
Query: 238 -RTVPNW 243
T P +
Sbjct: 111 PATFPPF 117
>gi|255576469|ref|XP_002529126.1| prp4, putative [Ricinus communis]
gi|223531405|gb|EEF33239.1| prp4, putative [Ricinus communis]
Length = 1033
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 287 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR 346
E+RHG + + GR+RE E+ E +R R+RD R D+ DR+R+R+R++ RD+
Sbjct: 293 EERHGSWNTQ-----GREREMNWEQRREQGRERSRERDQRRDK---DRERSRERDQRRDK 344
Query: 347 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
RER RDR R++GR+ RD DR + R+KE++R R RE +RD
Sbjct: 345 DRERSRDRDLRREKGREGSRDSSVDRYRRREKEQERSRDREVDRD 389
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/162 (38%), Positives = 96/162 (59%), Gaps = 16/162 (9%)
Query: 292 DRDRERSRERG--RDREREREKSLELSHDRPRD--RDHRDDRHHR---DRDRTRDRERER 344
D+DRERSRER RD++RER + +L ++ R+ RD DR+ R +++R+RDRE +R
Sbjct: 329 DKDRERSRERDQRRDKDRERSRDRDLRREKGREGSRDSSVDRYRRREKEQERSRDREVDR 388
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 404
D R++ ++R+ DR+ RD+ ++ + +R DR+ DR R RE+ R R+ E+ D+ R
Sbjct: 389 DLKRQKQQERSWDREVDRDQRKERQWERSLDREMINDRRREREQGRSREEEL---DKKRQ 445
Query: 405 YSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHE 446
+DR D + +ERDR ER +E DRG Y E
Sbjct: 446 KEKDRSKDKS-MSRANERDRDWER-----VKETDRGSYAERE 481
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 61/106 (57%), Gaps = 21/106 (19%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
DR DRD+ +ER+ E+SL DR+ +DR R+R++ R RE E D+
Sbjct: 401 DREVDRDQR--------KERQWERSL--------DREMINDR-RREREQGRSREEELDKK 443
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
R++++DR++D + R +ERDR+ +R KE DR ERER RD
Sbjct: 444 RQKEKDRSKD----KSMSRANERDRDWERVKETDRGSYAERERARD 485
>gi|195504667|ref|XP_002099177.1| GE10772 [Drosophila yakuba]
gi|194185278|gb|EDW98889.1| GE10772 [Drosophila yakuba]
Length = 655
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 114/251 (45%), Gaps = 47/251 (18%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F S+G + K C+ ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGVL-----------------KGCE----VIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T YAF+E+ + +AAY + D +D RR+ VD + + WR G G G
Sbjct: 277 TGDSLQYAFVEFEEQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVV 332
Query: 256 RVGGEE--VNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSL 313
G+ N R + ++P+ G SR RED D+ E R R ER + +
Sbjct: 333 GDYGKLDFDNLRDNKDRRKPNNGRSR------REDHKEDKRAEDPRHRMSSAERRKAR-- 384
Query: 314 ELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDRE 373
R +++ RDDR + R R+R RE++ E++R R+R+ G R DRE
Sbjct: 385 ---EQRHQEQSERDDRKNV-RGRSRSREKQ-----EQNRSRSRNWQNGSVR---EYSDRE 432
Query: 374 KDRDKERDRDR 384
++R++ R R
Sbjct: 433 RNRNERSSRSR 443
>gi|149055936|gb|EDM07367.1| U1 small nuclear ribonucleoprotein polypeptide A (predicted),
isoform CRA_e [Rattus norvegicus]
Length = 352
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 68/130 (52%), Gaps = 29/130 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L VA L+ + ++ FE G C +PC T P
Sbjct: 14 LLVAWLTGGSVSVCVQMWFEGQG----CCCM-----------EPC----------LTRGP 48
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGG 259
G + + AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG
Sbjct: 49 SG----DSPSPTSVAAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGG 104
Query: 260 EEVNQRYSGR 269
+VN R+SGR
Sbjct: 105 ADVNIRHSGR 114
>gi|389584299|dbj|GAB67032.1| Ser/Arg-rich splicing factor [Plasmodium cynomolgi strain B]
Length = 352
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L + +L Y+T+ S ++ +F+ +G IK V L D T +
Sbjct: 13 SLLIRKLKYDTSPSMVREKFKKFGAIK---------------------DVYLPIDYYTKE 51
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV-ERGRTVP 241
PRG+ F+E+ +D + A K+ +G ++DG R+ V V ++GR+ P
Sbjct: 52 PRGFGFVEFYDPKDAEQALKEMNGSEIDGNRIEVFVAQKGRSDP 95
>gi|307195699|gb|EFN77541.1| hypothetical protein EAI_11554 [Harpegnathos saltator]
Length = 1164
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 62/103 (60%), Gaps = 9/103 (8%)
Query: 317 HDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR----DRGRDHERDR 372
+DR RDR RD R +DR+ +R +RDRGR +D +R DRDRGR +R D +R R
Sbjct: 514 YDRERDRGSRDRALDRGKDRSPERALDRDRGRSQDPERPSDRDRGRSQDRERTSDRQRGR 573
Query: 373 EKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
+DR+ DRDR R ++R+R DR RG S+DR+ DR
Sbjct: 574 SQDREGTSDRDRGRSQDRER-----TSDRQRGRSQDREGTSDR 611
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 275 RGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDR 334
RG RS E + DR +D ER +R R R ++RE++ + R +DR+ DR DR
Sbjct: 529 RGKDRSPERALDRDRGRSQDPERPSDRDRGRSQDRERTSDRQRGRSQDREGTSDR---DR 585
Query: 335 DRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERD------REKDRDKERDRDRTRER 388
R++DRER DR R R +DR DRGR R RD +R R DRD++ +R R R
Sbjct: 586 GRSQDRERTSDRQRGRSQDREGTSDRGRGRSRDPDRQERPYSPRLLDRDRDAERSRASSR 645
Query: 389 ERD 391
+D
Sbjct: 646 AKD 648
>gi|291245145|ref|XP_002742452.1| PREDICTED: THO Complex (transcription factor/nuclear export)
subunit family member (thoc-2)-like [Saccoglossus
kowalevskii]
Length = 982
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 63/98 (64%), Gaps = 12/98 (12%)
Query: 299 RERGRDRERER--EKSLEL-------SHDRPRDRDHRDDR-HHRDRDRTRDRERERDRGR 348
RER RDRE+ER EK E +H+ R +D DDR + R T +E+E ++ R
Sbjct: 829 RERDRDREKERKSEKKREYHADGEKETHEVKRRKD--DDRASSKSRHSTDGKEKESEKNR 886
Query: 349 ERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 386
ER+R++ RD+ RDRG+D ER + KDRD+E+D+D+T+
Sbjct: 887 EREREKEHHRDKERDRGKDRERGKSKDRDREKDKDKTK 924
>gi|47227297|emb|CAF96846.1| unnamed protein product [Tetraodon nigroviridis]
Length = 2196
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 58/78 (74%), Gaps = 13/78 (16%)
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVG 397
++++R++DR +E+DRD+ R++++ RD+ R+ E+DR++DR+KE+DRDR++E++RD+D
Sbjct: 1880 KEKDRDQDRSKEKDRDQDRNKEKDRDQDRNKEKDRDQDRNKEKDRDRSKEKDRDQD---- 1935
Query: 398 DPDRDRGYSRDRDSDYDR 415
R+++ D DR
Sbjct: 1936 ---------RNKEKDRDR 1944
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 61/95 (64%), Gaps = 23/95 (24%)
Query: 297 RSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTR 356
+ ++R +DR +E++ RD+DR ++++R++DR +E+DRD +
Sbjct: 1880 KEKDRDQDRSKEKD---------------------RDQDRNKEKDRDQDRNKEKDRD--Q 1916
Query: 357 DRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
DR++ +DR R E+DR++DR+KE+DRDR R +E+D
Sbjct: 1917 DRNKEKDRDRSKEKDRDQDRNKEKDRDRDRSKEKD 1951
>gi|825727|emb|CAA30303.1| hU1-70K protein (286 AA) [Homo sapiens]
Length = 285
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 51/62 (82%)
Query: 209 HTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSG 268
+ + AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SG
Sbjct: 1 YNTSVYAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSG 60
Query: 269 RE 270
R+
Sbjct: 61 RD 62
>gi|193786989|dbj|BAG51812.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 213 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
+ AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 61 VTAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 118
>gi|330922608|ref|XP_003299903.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
gi|311326217|gb|EFQ91998.1| hypothetical protein PTT_11003 [Pyrenophora teres f. teres 0-1]
Length = 476
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 74/266 (27%), Positives = 112/266 (42%), Gaps = 45/266 (16%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
+ K+R E+ A A L+ V+ P LFV +L+ T + ++ F +G I
Sbjct: 218 LEKIRREREARAQALTLEMVGDLPFAEVA-PPENVLFVCKLNPVTQDEDLELIFSRFGKI 276
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
SC ++ DK+T YAFIEY + +D + AY + DG
Sbjct: 277 L-----SC----------------EVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVL 315
Query: 225 LDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTTRVGGEEVNQRY---SGREQEP 273
+D R+ VD + R V N + RR GG G + E ++Y SGR+
Sbjct: 316 IDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGG--IDNLEKKKQYRDGSGRQ--- 370
Query: 274 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD 333
+ + DRD + R RE R+ + + R R +++ DD + R
Sbjct: 371 ------IMSDSVVNNLVVDRDVPKDTTTQRPRESGRDTRRDDTRRRERRQEYHDDSYKRK 424
Query: 334 RDRTRDRE-RERDRGRERDRDRTRDR 358
R R+ RE R+ D GR DR R R R
Sbjct: 425 RSRSPTRERRDGDDGRYNDRRRERSR 450
>gi|5912017|emb|CAB55969.1| hypothetical protein [Homo sapiens]
gi|119572830|gb|EAW52445.1| small nuclear ribonucleoprotein 70kDa polypeptide (RNP antigen),
isoform CRA_a [Homo sapiens]
Length = 341
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 50/58 (86%)
Query: 213 MKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGRE 270
+ AAYK ADG+K+DGRRVLVDVERGRTV WRPRRLGGGLG TR GG +VN R+SGR+
Sbjct: 61 VTAAYKHADGKKIDGRRVLVDVERGRTVKGWRPRRLGGGLGGTRRGGADVNIRHSGRD 118
>gi|334312325|ref|XP_001376502.2| PREDICTED: death-inducer obliterator 1 [Monodelphis domestica]
Length = 2350
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 59/101 (58%), Gaps = 8/101 (7%)
Query: 302 GRDREREREKSLELSHDRPRDR--DHRDDRHHRDRDRTRD--RERERDRGRERDRDRTRD 357
GR RER + E S D P + ++R R DR R RD + ERDRGR RDR RD
Sbjct: 2154 GRQRERFEGGTKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNWSRDRERD 2213
Query: 358 RDRGRD----RGRDHERDREKDRDKERDRDRTRERERDRDY 394
DR RD R +D RD +K++++ +RD+ RE ER++++
Sbjct: 2214 WDRNRDWERHREKDSNRDWDKNKERNPNRDKERESERNKEW 2254
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 95/208 (45%), Gaps = 35/208 (16%)
Query: 235 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 294
+RG T + PR G E+ R+ + Q P +G + P + H +
Sbjct: 2051 QRGPTPLQFGPR----GAAPFSEKNEQPPSRFHFQGQSP-QGIKPAPRPLLELPSHPPQH 2105
Query: 295 R-ERSRERGRDREREREKSLELSHDRPR--DRDHRDDRHHRDRDRTRD-RERERDRGRER 350
R ER E G S + S + D RD + H R++ + R+RER G +
Sbjct: 2106 RKERWEEAGPSAPLPTNVSGQASESESQWPSSDFRDGKSHEYRNQAFEGRQRERFEGGTK 2165
Query: 351 DR-------------------DRTRDRDRG----RDRGRDHERDREKDRDKERDRDRTRE 387
++ DR RDRD G RDRGR+ RDRE+D D+ RD +R RE
Sbjct: 2166 EKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNWSRDRERDWDRNRDWERHRE 2225
Query: 388 RERDRDYEVGDPDRDRGYSRDRDSDYDR 415
++ +RD+ D +++R +RD++ + +R
Sbjct: 2226 KDSNRDW---DKNKERNPNRDKERESER 2250
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 65/118 (55%), Gaps = 20/118 (16%)
Query: 263 NQRYSGREQEPSRGPSR---SAEP--RIREDRHG--DRDRERSRERGRDREREREKSLEL 315
NQ + GR++E G ++ S EP ++ E+R G DR R R+ G+ ER+R ++
Sbjct: 2149 NQAFEGRQRERFEGGTKEKSSDEPETQLSENRQGRGFEDRRRDRDHGKPWERDRGRNW-- 2206
Query: 316 SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDRE 373
S DR R D DR RD ER R++ RD D+ ++R+ RD+ R+ ER++E
Sbjct: 2207 SRDRER-----------DWDRNRDWERHREKDSNRDWDKNKERNPNRDKERESERNKE 2253
>gi|426201409|gb|EKV51332.1| hypothetical protein AGABI2DRAFT_189584 [Agaricus bisporus var.
bisporus H97]
Length = 563
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P VS L+V L + TES IK+ FE +G + E V
Sbjct: 329 PGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGEL---------------------EFVD 367
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV--ERGRT 239
L D T + +GYAF++Y D + A +Q +G +L GR + V+ E+G T
Sbjct: 368 LHRDAMTGRSKGYAFVQYKRAEDARMALQQMEGFELAGRTLRVNTVHEKGTT 419
>gi|410897321|ref|XP_003962147.1| PREDICTED: LOW QUALITY PROTEIN: TRAF3-interacting protein 1-like
[Takifugu rubripes]
Length = 649
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 91/165 (55%), Gaps = 22/165 (13%)
Query: 282 EPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRD-RTRDR 340
EP+ + +D+E R + ++E +K + ++D+ + +D HH+++D R RD
Sbjct: 134 EPKTKASTSRSQDKENREGRELNLDKEEKKKITANNDKG---EQKDPAHHKEQDSRRRDG 190
Query: 341 ERERDRGRER--------------DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTR 386
E+E RGRER D+ ++RD+ +D+ R E+DRE+ ++++D++R R
Sbjct: 191 EKEHHRGRERSDKHQRREQEGHTKDKSHEQERDKEKDKARSREKDRERHHERDKDKERDR 250
Query: 387 ERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 431
ERD+D E DR+R + RD+D + DR D H+ ERD D
Sbjct: 251 HHERDKDEER---DRERHHERDKDKEKDR-DRHHDSHAAPERDKD 291
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 16/147 (10%)
Query: 293 RDRERSRERGRDREREREKSLELSHDRPRDRDH---RDDRHHRDRDRTRDRER--ERDRG 347
RD E+ RGR+R + ++ + H + D+ H RD + R R +DRER ERD+
Sbjct: 188 RDGEKEHHRGRERSDKHQRREQEGHTK--DKSHEQERDKEKDKARSREKDRERHHERDKD 245
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 407
+ERDR RD+D RDR R HERD++K++D++R D ERD+D + G RG R
Sbjct: 246 KERDRHHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRG-----RGKER 300
Query: 408 DRDSDYDRIDSKHERDRHGERDYDPTD 434
R +R ER++ GE T+
Sbjct: 301 QR----ERNKEPEERNKSGESSNSKTN 323
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 75/117 (64%), Gaps = 12/117 (10%)
Query: 284 RIREDRHGDRDRE-RSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR--TRDR 340
R R D+H R++E ++++ ++ER++EK D+ R R+ +RHH +RD+ RDR
Sbjct: 198 RERSDKHQRREQEGHTKDKSHEQERDKEK------DKARSREKDRERHH-ERDKDKERDR 250
Query: 341 ERERDRGRERDRDR--TRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
ERD+ ERDR+R RD+D+ +DR R H+ +RDK++ R R +ER+R+R+ E
Sbjct: 251 HHERDKDEERDRERHHERDKDKEKDRDRHHDSHAAPERDKDKQRGRGKERQRERNKE 307
>gi|409083550|gb|EKM83907.1| hypothetical protein AGABI1DRAFT_110515 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 563
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 51/112 (45%), Gaps = 23/112 (20%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P VS L+V L + TES IK+ FE +G + E V
Sbjct: 329 PGVSAPHGAILYVGSLHFNLTESDIKQVFEVFGEL---------------------EFVD 367
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV--ERGRT 239
L D T + +GYAF++Y D + A +Q +G +L GR + V+ E+G T
Sbjct: 368 LHRDAMTGRSKGYAFVQYKRAEDARMALQQMEGFELAGRTLRVNTVHEKGTT 419
>gi|260834392|ref|XP_002612195.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
gi|229297569|gb|EEN68204.1| hypothetical protein BRAFLDRAFT_125379 [Branchiostoma floridae]
Length = 418
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 21/102 (20%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+FV L YE TE + F YG I + +V DK+T KP
Sbjct: 37 VFVGGLPYELTEGDVLCVFSQYGEIV---------------------NINMVRDKKTGKP 75
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVP 241
+G+AFI Y + + A +G K+ GR + VD VP
Sbjct: 76 KGFAFICYENQKSTVLAVDNFNGVKIKGRTIRVDHVSNYRVP 117
>gi|195107957|ref|XP_001998560.1| GI24038 [Drosophila mojavensis]
gi|193915154|gb|EDW14021.1| GI24038 [Drosophila mojavensis]
Length = 577
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 47/226 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F +G +K C+ ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVK-----------------GCE----VIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T YAF+E+ + +AAY + D +D RR+ VD + + WR G G G
Sbjct: 277 TGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVV 332
Query: 256 RVGGEEVNQRYSGREQEPSRGPSRSAEPRIR--EDRHGDRDRERSRERGRDREREREKSL 313
G + S G ++PR R EDR G DR R+R ++ RE
Sbjct: 333 GDGSQ-----LDFNNLRESNGKKHESKPRKRGQEDRRGQGDRRIDRKRNDEQNREIT--- 384
Query: 314 ELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRD 359
S +R R R+ RH R+R DRGR + R+R R+
Sbjct: 385 --SEER---RKAREQRHREQRER-------EDRGRRNNTQRSRSRE 418
>gi|189197207|ref|XP_001934941.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980889|gb|EDU47515.1| cyclophilin family peptidyl-prolyl cis-trans isomerase Cyp6
[Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 509
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 112/266 (42%), Gaps = 45/266 (16%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
+ K+R E+ A A L+ V+ P LFV +L+ T + ++ F +G I
Sbjct: 251 LEKIRREREARAQALTLEMVGDLPFAEVA-PPENVLFVCKLNPVTQDEDLELIFSRFGKI 309
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
SC ++ DK+T YAFIEY + +D + AY + DG
Sbjct: 310 L-----SC----------------EVIRDKKTGDSLQYAFIEYTNQKDCEQAYFKMDGVL 348
Query: 225 LDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTTRVGGEEVNQRY---SGREQEP 273
+D R+ VD + R V N + RR GG G + E ++Y SGR+
Sbjct: 349 IDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGG--IDNLEKKKQYRDGSGRQ--- 403
Query: 274 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD 333
+ ++ DRD + R RE R+ + + R R +++ DD + R
Sbjct: 404 ------IMSDSVVDNLVADRDVPKDTTTQRPRESGRDTRRDDTRRRERRQEYHDDSYKRK 457
Query: 334 RDRTRDRE-RERDRGRERDRDRTRDR 358
R R+ RE R+ D GR R R R R
Sbjct: 458 RSRSPTRERRDGDDGRYNARRRERSR 483
Score = 38.9 bits (89), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 76/318 (23%), Positives = 112/318 (35%), Gaps = 99/318 (31%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 257 EREARAQALTLEMVGDLPFAEV------------APPENVLFVCKLNPVTQDEDLELIFS 304
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+G I SC ++ DK+T YAFIEY + +D + AY +
Sbjct: 305 RFGKIL-----SC----------------EVIRDKKTGDSLQYAFIEYTNQKDCEQAYFK 343
Query: 220 ADGRKLDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTTRVGGEEVNQRY---SG 268
DG +D R+ VD + R V N + RR GG G + E ++Y SG
Sbjct: 344 MDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGG--IDNLEKKKQYRDGSG 401
Query: 269 REQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDD 328
R+ + ++ DRD + R RE R+ + + R R +++ DD
Sbjct: 402 RQ---------IMSDSVVDNLVADRDVPKDTTTQRPRESGRDTRRDDTRRRERRQEYHDD 452
Query: 329 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
+ R R R+ RER RD D GR R ER R +
Sbjct: 453 SYKRKRSRSPTRER-------------RDGDDGRYNARRRERSRSPN------------- 486
Query: 389 ERDRDYEVGDPDRDRGYS 406
Sbjct: 486 ------------------ 486
>gi|158289428|ref|XP_001687752.1| AGAP000003-PA [Anopheles gambiae str. PEST]
Length = 251
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 73/114 (64%), Gaps = 1/114 (0%)
Query: 283 PRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRDRE 341
P + +D +R R+R ER RDRE ER++ E R R+ + + DR R RDR +R+
Sbjct: 86 PSLHQDGETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ 145
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
R+R+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E
Sbjct: 146 RDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETE 199
>gi|291239418|ref|XP_002739620.1| PREDICTED: U2 small nuclear RNA auxiliary factor 1-like 2-like,
partial [Saccoglossus kowalevskii]
Length = 641
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 53/132 (40%), Positives = 67/132 (50%), Gaps = 18/132 (13%)
Query: 294 DRERSRERG------RDREREREKSLELSHDRPRDRDHRDDR---HHRDRDRTRDRERER 344
DR RS RG R R+R K + +H + R R H R H RD+DR+ R+R
Sbjct: 375 DRGRSHSRGRDRRHSRGRDRSHSKGGDRNHSKGRGRSHSKGRGRSHSRDKDRSPSRDRSH 434
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHE--RDREKDRDKE----RDRDRTRERERDRDYEVGD 398
RGR+R + R R RDRG H RDR RD+ RDR+ +RER +DR +
Sbjct: 435 SRGRDRSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDRNHSRERSKDRSHS--- 491
Query: 399 PDRDRGYSRDRD 410
RDR S DRD
Sbjct: 492 KSRDRNKSSDRD 503
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 93/202 (46%), Gaps = 27/202 (13%)
Query: 251 GLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDRERERE 310
G G +R G + GR++ SRG RS DR+ + R RS +GR R R+
Sbjct: 366 GRGHSRDGSDRGRSHSRGRDRRHSRGRDRSHSKG--GDRNHSKGRGRSHSKGRGRSHSRD 423
Query: 311 K----SLELSHDRPRDRDHRDDR---HHRDR----DRTRDRERERDRGRERDRDRTRDRD 359
K S + SH R RDR H R H RDR R RDR RDR R RDR R+
Sbjct: 424 KDRSPSRDRSHSRGRDRSHSKGRGRSHSRDRGSKHSRGRDRSPSRDRSHSRGRDRNHSRE 483
Query: 360 RGRDRGRDHERDREKDRDKERDRDRTRERER---DRDYEVGDPDRDRGYSRDRDSDYDRI 416
R +DR RDR K D++ + R R R R DR + G RDR + + RDS DR
Sbjct: 484 RSKDRSHSKSRDRNKSSDRDHYKSRHRSRSRNRADRSHSRG---RDRSHCKGRDSSTDRS 540
Query: 417 DSKHERDRHGERDYDPTDQEDD 438
H R + P++ D
Sbjct: 541 --------HNTRVWSPSNSSGD 554
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 79/176 (44%), Gaps = 38/176 (21%)
Query: 268 GREQEPSRGPSRSA-----------------------EPRIREDRHGDR-DRERSRERGR 303
GR+ SRG RS R RE H DR D+ RS RGR
Sbjct: 295 GRDSSYSRGRDRSHRDRSDRSRSHSRDRSHSRGKDRRHSRGRERGHRDRIDKGRSNSRGR 354
Query: 304 DREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRD 363
DR R++S R R H D R R +R R+R RGR+R + DR+ +
Sbjct: 355 DRSCSRDRS-------DRGRGHSRDGSDRGRSHSRGRDRRHSRGRDRSHSKGGDRNHSKG 407
Query: 364 RGRDHERDR----EKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
RGR H + R +D+D+ RDR+ R RDR + G R R +SRDR S + R
Sbjct: 408 RGRSHSKGRGRSHSRDKDRSPSRDRSHSRGRDRSHSKG---RGRSHSRDRGSKHSR 460
>gi|432887647|ref|XP_004074952.1| PREDICTED: LOW QUALITY PROTEIN: nipped-B-like protein-like [Oryzias
latipes]
Length = 2690
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 93/178 (52%), Gaps = 7/178 (3%)
Query: 241 PNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPS---RSAEPRIREDRHGDRDRER 297
PN + L GG +R +E +QR S + E +RG S RS R + D+H + +
Sbjct: 557 PNSAEKSLSGGPPESRRLKQE-SQRVSKPKHESNRGHSNDRRSDMVRQKHDQHSNSLHKE 615
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 357
E+ + R S R DD R ++R ++++R R+ + RDR++TRD
Sbjct: 616 --EKNNNSHRSSRPETPKSSGRADYNSRCDDDKVRHKERNKEKQRVREEDKHRDRNKTRD 673
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDR 415
RD+ ++ E + +KDR K+R++D+ RE+E D + D+D+G +RD+ D D+
Sbjct: 674 RDKSKEVEGPREAEIDKDRHKDREQDKDREKESIED-KTRSRDKDKGRNRDKIRDVDK 730
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 69/120 (57%), Gaps = 23/120 (19%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-----HRDRDRTRDRERE 343
RH +R++E+ R R D+ R+R K+ RDRD + D+DR +DRE++
Sbjct: 648 RHKERNKEKQRVREEDKHRDRNKT--------RDRDKSKEVEGPREAEIDKDRHKDREQD 699
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREK----------DRDKERDRDRTRERERDRD 393
+DR +E D+TR RD+ + R RD RD +K ++DK+R R+RT+ +ERDR+
Sbjct: 700 KDREKESIEDKTRSRDKDKGRNRDKIRDVDKPREKEKDKEREKDKDRHRERTKGKERDRN 759
>gi|357146380|ref|XP_003573971.1| PREDICTED: RNA-binding protein 39-like [Brachypodium distachyon]
Length = 597
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 24/91 (26%)
Query: 325 HRDDRHHRDRD------RTRDRERERDRGRERDRDRTRDRDRGRDR--------GRDHER 370
HR R HRDRD +RDRE+ R++ RDR++ R++D GR R GRD E+
Sbjct: 61 HRSSREHRDRDDGKEKDGSRDREKVREKDEGRDREKVREKDGGRSREKVREKDEGRDPEK 120
Query: 371 DREKD----------RDKERDRDRTRERERD 391
REKD +D RDRD+ RE+ERD
Sbjct: 121 VREKDEGRDREKIREKDSSRDRDKVREKERD 151
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 62/109 (56%), Gaps = 30/109 (27%)
Query: 288 DRHGDRDRERSRER--GRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERD 345
++ G RDRE+ RE+ GRDRE+ REK D R+R++ RE+D
Sbjct: 75 EKDGSRDREKVREKDEGRDREKVREK---------------------DGGRSREKVREKD 113
Query: 346 RGRERDRDRTRDRDRGRD----RGRDHERDREKDRDKERD-RDRTRERE 389
G RD ++ R++D GRD R +D RDR+K R+KERD RDR ERE
Sbjct: 114 EG--RDPEKVREKDEGRDREKIREKDSSRDRDKVREKERDGRDRLMERE 160
>gi|147817202|emb|CAN77549.1| hypothetical protein VITISV_017244 [Vitis vinifera]
Length = 710
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 57/86 (66%), Gaps = 2/86 (2%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRE-- 349
DRD+ER +ER R ++R+REK E S DR ++R++ DR D+ + +ER RD+ RE
Sbjct: 155 DRDKEREKERXRAKDRDREKEKEKSKDREKERENDKDRDRDAIDKEKGKERIRDKEREAD 214
Query: 350 RDRDRTRDRDRGRDRGRDHERDREKD 375
+DRDR +DRD+G + RD DR KD
Sbjct: 215 QDRDRYKDRDKGSRKNRDEGHDRSKD 240
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 81/147 (55%), Gaps = 28/147 (19%)
Query: 329 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRD---------KE 379
R + ++R RD+ERE++R R +DRDR +++++ +DR + ER+ +KDRD KE
Sbjct: 147 REEKRKNRDRDKEREKERXRAKDRDREKEKEKSKDR--EKERENDKDRDRDAIDKEKGKE 204
Query: 380 RDRDRTRERERDRD-YEVGDPDRDRGYSRDRDSDYDRI-----DSKHERDRHGERDYDPT 433
R RD+ RE ++DRD Y DRD+G ++RD +DR D K + D RD D T
Sbjct: 205 RIRDKEREADQDRDRY----KDRDKGSRKNRDEGHDRSKDGGKDDKLKLDGGDNRDRDVT 260
Query: 434 DQ-------EDDRGWYDHHENYEHHRG 453
Q EDD +H +N E G
Sbjct: 261 KQGRGSHHDEDDSRAIEHEKNAEGASG 287
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 22/103 (21%)
Query: 126 PHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCD 185
P+ P S P + L+V L + TE ++ FE +G I
Sbjct: 269 PNLAPKTSNGPTR-LYVGSLHFNITEDMLRGIFEPFGKI--------------------- 306
Query: 186 EKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGR 228
+ ++L+TD +T K +GY F+ + H D K A +Q +G +L GR
Sbjct: 307 DHIQLMTDPDTGKSKGYGFLTFHHATDAKKAMEQLNGFELAGR 349
>gi|195135387|ref|XP_002012114.1| GI16794 [Drosophila mojavensis]
gi|193918378|gb|EDW17245.1| GI16794 [Drosophila mojavensis]
Length = 1128
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRER--ERDRGRERDRDRTRDR 358
R ++R+RER K S +R R +D R + HR ++R R +ER +DR R +R ++++R
Sbjct: 409 RSKERQRERSKQRLGSRERQRSKDARRNERHRSKERQRSKERLKSKDRARSMERHKSKER 468
Query: 359 DRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDR----DRGYSRDRDSDYD 414
+ ++R R ER R K+R + ++R R++ER R ++ V +R +R S++R +
Sbjct: 469 QQSKERQRPKERQRSKERQRSKERQRSKERLRSKER-VRSKERLRSKERARSKERQRSKE 527
Query: 415 RIDSKHERDRHGER 428
R+ SK ER R ER
Sbjct: 528 RVRSK-ERLRSKER 540
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 264 QRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDR 323
+R+ +E++ S+ R E + ++R ++R+RS+ER R +ER R K S +R R +
Sbjct: 461 ERHKSKERQQSKERQRPKERQRSKERQRSKERQRSKERLRSKERVRSKERLRSKERARSK 520
Query: 324 D-HRDDRHHRDRDRTRDRERERDRGRERDRDRTR--DRDRGRDRGRDHERDRE------- 373
+ R R ++R R +ER R + R+R ++R R +R R +DR R ER R
Sbjct: 521 ERQRSKERVRSKERLRSKERARSKERQRSKERVRSKERQRSKDRPRSKERQRSTERERQR 580
Query: 374 ---------KDRDKERDRDRTRERERDRDYEVG 397
K+R + +DR R+RER R ++ ++
Sbjct: 581 SRERERQRSKERARSKDRHRSRERLRSKERQLS 613
>gi|348532937|ref|XP_003453962.1| PREDICTED: nipped-B-like protein [Oreochromis niloticus]
Length = 2680
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 21/107 (19%)
Query: 285 IREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERER 344
I +++ DRD+ER E+ ++ER+R+K ++RDR RD+ER
Sbjct: 675 IEKEKERDRDKERHTEK--EKERDRDK-------------------EKERDRDRDKERHI 713
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
++ +ERDRD+ + ++ RDR +D ++EK+RDK +DRDR ++ R+
Sbjct: 714 EKEKERDRDKEKHIEKERDRDKDRHIEKEKERDKAKDRDRKQKMLRE 760
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 48/174 (27%)
Query: 274 SRGPS--RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRD---- 327
S+GPS R +PR + D+H + R +E + S + +RP +
Sbjct: 590 SKGPSDDRRPDPRQKHDKHS---------KSRHKEEKNHNSHRMLENRPETPKNTSKTER 640
Query: 328 DRH--------------------------------HRDRDRTRDRERERDRGRERDRDRT 355
RH ++++R RD+ER ++ +ERDRD+
Sbjct: 641 SRHGEDKGRDRDRDKDRERHKDRDRARDRDKERNIEKEKERDRDKERHTEKEKERDRDKE 700
Query: 356 RDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDR 409
++RDR RD+ R E+++E+DRDKE+ ++ R+R++DR E + +RD+ RDR
Sbjct: 701 KERDRDRDKERHIEKEKERDRDKEKHIEKERDRDKDRHIE-KEKERDKAKDRDR 753
>gi|403178034|ref|XP_003336468.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375173310|gb|EFP92049.2| hypothetical protein PGTG_18139 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEK 187
NDPN Y L+V L++ T+ I++ F+ +G I E
Sbjct: 444 NDPNS----YARLYVGSLNFNLTDDDIRQVFQPFGDI---------------------EY 478
Query: 188 VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
V L D+ T K +GYAF+++ + D K A ++ +G +L GR + V++
Sbjct: 479 VDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEI 525
>gi|395506689|ref|XP_003757663.1| PREDICTED: death-inducer obliterator 1 [Sarcophilus harrisii]
Length = 2351
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 8/98 (8%)
Query: 305 REREREKSLELSHDRPRDR--DHRDDRHHRDRDRTRDRER--ERDRGRERDRDRTRDRDR 360
RER + E S D P + ++R R DR R RD + ERDRGR RDR RD DR
Sbjct: 2158 RERFEGSTKEKSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRERDWDR 2217
Query: 361 GRD----RGRDHERDREKDRDKERDRDRTRERERDRDY 394
RD R +D RD +K++++ +RD+ RE ER++++
Sbjct: 2218 NRDWERHREKDSNRDWDKNKERNPNRDKDRESERNKEW 2255
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 92/207 (44%), Gaps = 34/207 (16%)
Query: 235 ERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRD 294
+RG T + PR G E+ R+ + Q P +G + P + H +
Sbjct: 2053 QRGPTPLQFGPR----GSAPFSEKNEQPPSRFHFQGQSP-QGMKPAPRPLLELPSHPPQH 2107
Query: 295 R-ERSRERGRDREREREKSLEL--SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
R ER E G S S + D RD + H R++T + RER G ++
Sbjct: 2108 RKERWEEAGPSAPLPTNVSGPAPESDSQWTSSDFRDGKSHEYRNQTFEGRRERFEGSTKE 2167
Query: 352 R-------------------DRTRDRDRG----RDRGRDHERDREKDRDKERDRDRTRER 388
+ DR RDRD RDRGR+ RDRE+D D+ RD +R RE+
Sbjct: 2168 KSSDEPESQLSENRQGRGFEDRRRDRDHAKPWERDRGRNWSRDRERDWDRNRDWERHREK 2227
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDR 415
+ +RD+ D +++R +RD+D + +R
Sbjct: 2228 DSNRDW---DKNKERNPNRDKDRESER 2251
>gi|242824516|ref|XP_002488274.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
gi|218713195|gb|EED12620.1| cyclophilin-type peptidyl-prolyl cis-trans isomerase, putative
[Talaromyces stipitatus ATCC 10500]
Length = 455
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 85/214 (39%), Gaps = 56/214 (26%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+K P LFV +L+ T + + F
Sbjct: 222 EREARAQALTLEMVGDLPFAEVKP------------PENVLFVCKLNPVTQDEDLHLIFS 269
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+GPI SC ++ DK T YAFIE+ + +D + AY +
Sbjct: 270 RFGPIL-----SC----------------EVIRDKRTGDSLQYAFIEFENQKDCEQAYFK 308
Query: 220 ADGRKLDGRRVLVDVER--GRTVPNWR----PRRLGGGLGTTRVGGEEVNQRYSGREQEP 273
+G +D R+ VD + + WR +R GGG G + E ++Y
Sbjct: 309 MEGVLIDDHRIHVDFSQSVSKLSDTWRQATVQKRQGGGFGG--ISSLERKRQY------- 359
Query: 274 SRGPSRSAEPRIREDRHG---DRDRERSRERGRD 304
R+AE R R DR+G D+D R RD
Sbjct: 360 -----RTAEDRGRPDRYGMVFDKDEMRRPPPSRD 388
>gi|403175151|ref|XP_003889057.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171476|gb|EHS64385.1| hypothetical protein PGTG_22242 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 705
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEK 187
NDPN Y L+V L++ T+ I++ F+ +G I E
Sbjct: 444 NDPN----SYARLYVGSLNFNLTDDDIRQVFQPFGDI---------------------EY 478
Query: 188 VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
V L D+ T K +GYAF+++ + D K A ++ +G +L GR + V++
Sbjct: 479 VDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEI 525
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 40/47 (85%)
Query: 336 RTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR 382
R R++ER+RDR RE++R + ++RDR +DR RD E+D+EK+++KERD+
Sbjct: 391 RLREKERDRDREREKERSKNKERDREKDRERDREKDQEKEQEKERDK 437
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 40/49 (81%), Gaps = 2/49 (4%)
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 392
R R +ERDRDR R+++R +++ RD E+DRE RD+E+D+++ +E+ERD+
Sbjct: 391 RLREKERDRDREREKERSKNKERDREKDRE--RDREKDQEKEQEKERDK 437
>gi|403374574|gb|EJY87244.1| Peptidylprolyl isomerase (Cyclophilin)-like 4 [Oxytricha trifallax]
Length = 412
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 127/319 (39%), Gaps = 87/319 (27%)
Query: 94 KAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESK 153
K E +++ + H+ + + E+L D +P P LFV +L+ T +
Sbjct: 156 KTEDQIQQEIKEHQTKTRAAVLEIVEDLP--DADIEP-----PKNVLFVCKLNPVTQDGD 208
Query: 154 IKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDM 213
++ F +GPIK C E VR D +T YAFIE+ +
Sbjct: 209 LRLIFSRFGPIK------------------CCEIVR---DWKTGDSLQYAFIEFENEESC 247
Query: 214 KAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEP 273
AY + +G +D RR+ +D + W R
Sbjct: 248 IEAYSRMEGVAIDERRIHIDFSQS-VAKEWNQYR-------------------------- 280
Query: 274 SRGPSRSAEPRIREDRHGDRDRER------SRERGRDREREREKSLELSHDRPRDRDHRD 327
R ++A +I E +++ER S + +DRE ++ ELS R RDHR
Sbjct: 281 -RKMLKTAADQILEQEQARKEKERQVYNLFSNYKNKDREGRKD---ELSG--SRSRDHR- 333
Query: 328 DRHHRDRDRTRD------------------RERERDRGRERDRDRTRDRDRGRDRGRDHE 369
R+ +D DR ++ + RERDR +DR R+R R + +D +
Sbjct: 334 -RNDKDYDRKKENDRGKDRDRRRSRDRDYDKHRERDRAGYKDRKRSRSDSRNKRDKKDKK 392
Query: 370 RDREKDRDKERDRDRTRER 388
+ RD+E+ R+R R+R
Sbjct: 393 DHKSYSRDEEKYRERRRDR 411
>gi|170056240|ref|XP_001863941.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876010|gb|EDS39393.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 643
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
Query: 286 REDRHGDRDRERSRERGRDREREREK--SLELSHDRPRDRDHRDDRHHRDRDRTRDRERE 343
++DR +R ++R ER +DR+ ER+K E DR +R +D + R +DR +R+++
Sbjct: 421 QKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKPER-QKDRKTERQKDRKTERQKD 479
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
R R++DR R +DR +R +D + +R+KDR ER +DR ER++ D
Sbjct: 480 RKTERQKDRKTERQKDRETERQKDRKTERQKDRKTERQKDRKTERQKTED 529
Score = 46.2 bits (108), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 11/115 (9%)
Query: 320 PRDRD---HRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 376
P+DR +D + R +DR +R+++R R++DR R +DR +R +D + +R+KDR
Sbjct: 405 PKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKTERQKDRKPERQKDR 464
Query: 377 DKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYD 431
ER +DR ER++DR E +DR R +D + +R ++DR ER D
Sbjct: 465 KTERQKDRKTERQKDRKTER---QKDRKTERQKDRETER-----QKDRKTERQKD 511
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 68/126 (53%), Gaps = 16/126 (12%)
Query: 286 REDRHGDRDRERSRERGRDREREREK--SLELSHDRPRDRDHRDDRHHRDRDR---TRDR 340
++DR +R ++R ER +DR+ ER+K E DR +R +DR + DR T DR
Sbjct: 485 QKDRKTERQKDRETERQKDRKTERQKDRKTERQKDRKTERQKTEDRRQKTEDRRQKTEDR 544
Query: 341 ERERDRGRERDRDR---TRDRDRGRDRGRDHERDREKDRDK--------ERDRDRTRERE 389
++ + R++ DR T DR + +R +D E +R+KDR ER +DR ER+
Sbjct: 545 RQKTEDRRQKTEDRRQKTEDRRQKTERQKDTETERQKDRKTGIQKDRKTERQKDRKTERQ 604
Query: 390 RDRDYE 395
+DR E
Sbjct: 605 KDRKTE 610
>gi|395334381|gb|EJF66757.1| splicing factor CC1-like protein [Dichomitus squalens LYAD-421 SS1]
Length = 624
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 21/95 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + +ES IK+ FE +G + E V L D T +
Sbjct: 400 LYVGSLHFNLSESDIKQVFEPFGEL---------------------EFVDLHRDPVTGRS 438
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
+GYAF++Y D K A +Q DG +L GR + V+
Sbjct: 439 KGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNT 473
>gi|357441861|ref|XP_003591208.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
gi|355480256|gb|AES61459.1| U4/U6.U5 tri-snRNP-associated protein [Medicago truncatula]
Length = 936
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 14/115 (12%)
Query: 332 RDRDRTRDRERERDRGRERD--RDRTRDRDRGRDRGRDHER-DREKDRDKERDRDRTRER 388
++R + + R+RERD+G+ER+ RDR RD RD+G+D R +RE DR+K+R RDR +
Sbjct: 131 KERGKEKTRDRERDKGKEREKHRDRESYRDGDRDKGKDKIREERESDREKDRSRDRGSRK 190
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHER-------DRHGERDYDPTDQE 436
+ DYE G+ D Y RD D KHE+ D+ GE + + +E
Sbjct: 191 AHEEDYESGNLDDRVDYHEKRDEDV----GKHEKASKLNQDDKEGETSANLSSKE 241
>gi|159461692|gb|ABW96885.1| Elipsa [Danio rerio]
Length = 629
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 318 DRPRDRDHRDDRHHRDRDRTR-DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 376
D+P+D++ + D R RD R D+ RER+R ++RDRD+ + RDR +D+ R+ ER+REKDR
Sbjct: 179 DQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDR 238
Query: 377 DKERDRDRTRERERDRDYE 395
++E++R+R ++R++ ++ E
Sbjct: 239 NREKERERDKDRDKKKERE 257
>gi|299755304|ref|XP_002912089.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
gi|298411164|gb|EFI28595.1| hypothetical protein CC1G_13622 [Coprinopsis cinerea okayama7#130]
Length = 580
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 22/107 (20%)
Query: 127 HNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDE 186
H P V+ L+V L + TES IK+ FE +G + E
Sbjct: 345 HLPPGVTASG-AILYVGSLHFNLTESDIKQVFEPFGEL---------------------E 382
Query: 187 KVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
V L D T + +GYAF++Y D + A +Q +G +L GR + V+
Sbjct: 383 FVDLHKDPMTGRSKGYAFVQYKRAEDARMALEQMEGFELAGRTLRVN 429
>gi|41054766|ref|NP_956894.1| TRAF3-interacting protein 1 [Danio rerio]
gi|82187293|sp|Q6PGZ3.1|MIPT3_DANRE RecName: Full=TRAF3-interacting protein 1
gi|34783761|gb|AAH56776.1| TNF receptor-associated factor 3 interacting protein 1 [Danio
rerio]
Length = 629
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 60/79 (75%), Gaps = 1/79 (1%)
Query: 318 DRPRDRDHRDDRHHRDRDRTR-DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 376
D+P+D++ + D R RD R D+ RER+R ++RDRD+ + RDR +D+ R+ ER+REKDR
Sbjct: 179 DQPKDQESKRDDKDRRRDAERSDKGRERERTKDRDRDKDKSRDREKDKTREKEREREKDR 238
Query: 377 DKERDRDRTRERERDRDYE 395
++E++R+R ++R++ ++ E
Sbjct: 239 NREKERERDKDRDKKKERE 257
>gi|195158659|ref|XP_002020203.1| GL13859 [Drosophila persimilis]
gi|194116972|gb|EDW39015.1| GL13859 [Drosophila persimilis]
Length = 615
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F +G +K C ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVK-----GCE----------------VIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T YAF+E+ + +AAY + D +D RR+ VD + + WR G G G
Sbjct: 277 TGDSLQYAFVEFEEQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVE 332
Query: 256 RVGGE 260
V G+
Sbjct: 333 GVDGK 337
>gi|328859425|gb|EGG08534.1| hypothetical protein MELLADRAFT_84729 [Melampsora larici-populina
98AG31]
Length = 649
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 52/107 (48%), Gaps = 25/107 (23%)
Query: 128 NDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEK 187
NDPN Y L+V L++ T+ +++ F+ +G I E
Sbjct: 427 NDPNS----YARLYVGSLNFNLTDDDLRQVFQPFGDI---------------------EY 461
Query: 188 VRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
V L D+ T K +GYAF+++ + D K A ++ +G +L GR + V++
Sbjct: 462 VDLHRDQITGKSKGYAFVQFKNMHDAKNAMEKMNGFQLAGRALRVEI 508
>gi|194909374|ref|XP_001981933.1| GG12319 [Drosophila erecta]
gi|190656571|gb|EDV53803.1| GG12319 [Drosophila erecta]
Length = 654
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 137/321 (42%), Gaps = 65/321 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F S+G +K C+ ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGMLK-----------------GCE----VIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP--RRLGGGLG 253
T YAF+E+ + +AAY + D +D RR+ VD + + WR R + G G
Sbjct: 277 TGDSLQYAFVEFEEQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGKGRGVVGDYG 336
Query: 254 TTRVGGEEVNQRY----SGREQ-EPSRGPSRSAEPR----------IREDRHGDRDRERS 298
N+ + GR + E R P R+ +PR RE RH ++
Sbjct: 337 KLDFDNLRDNKDHRKSNDGRSRTEDHREPKRADDPRNRMSSAERKKAREQRHQEQSERDD 396
Query: 299 RERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDR 358
R+ R R R REK E + R R+ + R + DR+R R+ ER R RDRT R
Sbjct: 397 RKNVRRRTRSREKQ-EQNRSRSRNWPNGSARKNSDRERIRN---ERS---SRSRDRTHRR 449
Query: 359 DRGRDRGRDH---------ERDREKDRD-KERDRDRTRE-----RERDRDYEVGDPDRDR 403
+ ER+R + RD KER R R RE R R RD P ++R
Sbjct: 450 HSRSRDREERRRSRPRDQLERERSRSRDQKERRRSRPREQNERRRSRSRDQTEKRPPQNR 509
Query: 404 GYSRDRDSDYDRIDSKHERDR 424
+++ R R +S ER R
Sbjct: 510 DHNKSR-----RFNSPQERRR 525
>gi|440796324|gb|ELR17433.1| Sec7 and ankyrin domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1521
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 69/106 (65%), Gaps = 17/106 (16%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR---GR 348
D+D++RS ERG D++RE++K DR +DR R D+ +DR R RE ++DR +
Sbjct: 280 DKDKDRS-ERG-DKDREKDK------DRHKDRGERGDKSDGGKDRERARESDKDRERSAK 331
Query: 349 ERDRDRTRDRDRGRDR------GRDHERDREKDRDKERDRDRTRER 388
+ D+DR RD+DR +++ +D ER RE D++KE+DR+R +++
Sbjct: 332 DGDKDRERDKDRDKEKEKDGKDSKDRERTREGDKEKEKDRERRKDK 377
>gi|198449749|ref|XP_002136956.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
gi|198130740|gb|EDY67514.1| GA26948 [Drosophila pseudoobscura pseudoobscura]
Length = 494
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 25/125 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F +G +K C ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSRFGVVK-----GC----------------EVIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T YAF+E+ + +AAY + D +D RR+ VD + + WR G G G
Sbjct: 277 TGDSLQYAFVEFEEQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWR----GKGRGVE 332
Query: 256 RVGGE 260
V G+
Sbjct: 333 GVDGK 337
>gi|449551106|gb|EMD42070.1| hypothetical protein CERSUDRAFT_90674 [Ceriporiopsis subvermispora
B]
Length = 623
Score = 47.4 bits (111), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TES IK+ FE +G + E V L D T +
Sbjct: 399 LYVGSLHFNLTESDIKQVFEPFGEL---------------------EFVDLHRDPMTGRS 437
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+GYAF++Y + D + A +Q +G +L GR + V+
Sbjct: 438 KGYAFVQYKRSEDARMALEQMEGFELAGRTLRVN 471
>gi|348577695|ref|XP_003474619.1| PREDICTED: TRAF3-interacting protein 1-like [Cavia porcellus]
Length = 634
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/137 (36%), Positives = 74/137 (54%), Gaps = 23/137 (16%)
Query: 279 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHR-DRDRT 337
R++E + R ++ +E ++E + RERER+K DR R RD D+H +R+R
Sbjct: 169 RNSEVKERSTSRDEKQKEDAKEESKPRERERDKEKMKESDRARHRDPGRDKHREGERERA 228
Query: 338 RDR---ERERDR-------------------GRERDRDRTRDRDRGRDRGRDHERDREKD 375
++R ERERDR GRERDRDR ++DR R R R+H R R++D
Sbjct: 229 KNRAKPERERDRDRGNKDRDREAERERRSEGGRERDRDRGGEQDRDRARDREHHRARDRD 288
Query: 376 RDKERDRDRTRERERDR 392
+D +R + RE+DR
Sbjct: 289 GPLPKDPEREKSREQDR 305
Score = 40.0 bits (92), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 326 RDDRHHRD-RDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDR-------EKDRD 377
RD++ D ++ ++ RERERD+ + ++ DR R RD GRD+ R+ ER+R E++RD
Sbjct: 180 RDEKQKEDAKEESKPRERERDKEKMKESDRARHRDPGRDKHREGERERAKNRAKPERERD 239
Query: 378 KERDRDRTRERERDRDYEVG--DPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDP 432
++R G + DRDRG +DRD DR + RDR G DP
Sbjct: 240 RDRGNKDRDREAERERRSEGGRERDRDRGGEQDRDRARDR-EHHRARDRDGPLPKDP 295
>gi|357624977|gb|EHJ75550.1| hypothetical protein KGM_17346 [Danaus plexippus]
Length = 666
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 26/150 (17%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I ++ EK A+ A L+ D ++ P LFV +L+ TT+ ++ F +G I
Sbjct: 208 IQEMIEEKEAKARATILEIVGDLPDAEIA-PPENVLFVCKLNPVTTDEDLEIIFSRFGKI 266
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
SC ++ DK+T+ YAFIE+ + + + AY + D
Sbjct: 267 V-----SC----------------EVIRDKKTSNSLQYAFIEFDNKKSCEDAYFKMDNVL 305
Query: 225 LDGRRVLVDVERGRTVPNWRPRRLGGGLGT 254
+D RR+ VD + + W LG G G
Sbjct: 306 IDDRRIHVDFSQSVSKMRW----LGKGRGV 331
>gi|393247915|gb|EJD55422.1| splicing factor, CC1-like protein [Auricularia delicata TFB-10046
SS5]
Length = 581
Score = 46.6 bits (109), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 48/105 (45%), Gaps = 23/105 (21%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TE IK+ FE +G + + V L D T +
Sbjct: 356 LYVGSLHFNLTEQDIKQVFEPFGEL---------------------DFVDLHRDPGTGRS 394
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV--ERGRTVPN 242
+GYAF++Y D K A +Q DG +L GR + V+ E+G V N
Sbjct: 395 KGYAFVQYKRAEDAKMALEQMDGFELAGRTLRVNSVNEKGVAVRN 439
>gi|195330360|ref|XP_002031872.1| GM23818 [Drosophila sechellia]
gi|194120815|gb|EDW42858.1| GM23818 [Drosophila sechellia]
Length = 899
Score = 46.2 bits (108), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 39/46 (84%), Gaps = 2/46 (4%)
Query: 347 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 392
GR +D+++ RDRDR D+ ++ +RDREK ++K+RDRD+++E++RDR
Sbjct: 178 GRVKDKEKERDRDR--DKSKEKDRDREKSKEKDRDRDKSKEKDRDR 221
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 22/103 (21%)
Query: 329 RHHRDRDRTRDRERERDRGRER----------------DRDRTRDRDRGRDRGRDHERDR 372
+ HRDRDR +R RER+R +E+ D+ R ++RD+ RD+ RD ER R
Sbjct: 13 KSHRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-RDKERTR 71
Query: 373 EKDRDKERDRDRT----RERERDRDYEVGDPDRDRGYSRDRDS 411
RD ERDR R RE+ERDRD+E D +R++ RD++S
Sbjct: 72 -SSRDDERDRARERTKDREKERDRDHEGRDAEREKERERDKES 113
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 36/111 (32%)
Query: 288 DRHGDRDRERSR---------------ERGRD---REREREKSLELSHDRPRDRDHRDDR 329
DR+G+R RER R E+ D RE+ER+K HRD
Sbjct: 19 DRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDK-------------HRD-- 63
Query: 330 HHRDRDRTR-DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKE 379
RD++RTR R+ ERDR RER +DR ++RDR + GRD ER++E++RDKE
Sbjct: 64 -KRDKERTRSSRDDERDRARERTKDREKERDRDHE-GRDAEREKERERDKE 112
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 64/99 (64%), Gaps = 4/99 (4%)
Query: 293 RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH-HRDRDRTRD-RERERDRGRER 350
RDR+R+ ER R+RER++EK R DD+H ++RD+ RD R++ER R R
Sbjct: 16 RDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDKRDKERTRS-SR 74
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERE 389
D +R R R+R +DR ++ +RD E RD ER+++R R++E
Sbjct: 75 DDERDRARERTKDREKERDRDHE-GRDAEREKERERDKE 112
>gi|328873267|gb|EGG21634.1| U1 small nuclear ribonucleoprotein 70 kDa protein [Dictyostelium
fasciculatum]
Length = 433
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 62/119 (52%), Gaps = 19/119 (15%)
Query: 321 RDRDHRDDRHHRDRDRTRDR------ERERDRGRERDRDRTRDRDRGRDRGRDHERDREK 374
RDR R DR DRD R +RERDRG +RDR+R DRG DRG D ERDR
Sbjct: 321 RDRGERSDRGGGDRDYRSSRSDRSTGDRERDRGSDRDRER----DRGSDRG-DRERDRGS 375
Query: 375 DRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPT 433
+R DRDR R R G DR+R Y+ + S DR + ERD HG D + T
Sbjct: 376 ERSSGSDRDRERHRS-------GGSDRERDYNNNNGSSNDR-HRERERDHHGGEDRNGT 426
Score = 39.3 bits (90), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 55/105 (52%), Gaps = 8/105 (7%)
Query: 291 GDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRER 350
GDRD SR +RER++ DR R+RD DR R+RDR +R DR RER
Sbjct: 332 GDRDYRSSRSDRSTGDRERDRG----SDRDRERDRGSDRGDRERDRGSERSSGSDRDRER 387
Query: 351 DR----DRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
R DR RD + D R+RE+D DR+ TRERERD
Sbjct: 388 HRSGGSDRERDYNNNNGSSNDRHRERERDHHGGEDRNGTRERERD 432
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TES+++ FE +GP+ E V+L D ET
Sbjct: 299 LYVGNLHFNMTESQLREIFEPFGPV---------------------EVVQLPLDLETGHC 337
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
+G+ F+++ H KAA ++ GR + V
Sbjct: 338 KGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKVSC 372
>gi|356525566|ref|XP_003531395.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 550
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 21/93 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TES+++ FE +GP+ E V+L D ET
Sbjct: 295 LYVGNLHFNMTESQLREIFEPFGPV---------------------EIVQLPLDLETGHC 333
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 232
+G+ F+++ H KAA ++ GR + V
Sbjct: 334 KGFGFVQFTHLEHAKAAQSLNGKLEIAGRTIKV 366
>gi|390342940|ref|XP_001198098.2| PREDICTED: RNA-binding protein 39-like [Strongylocentrotus
purpuratus]
Length = 666
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 50/109 (45%), Gaps = 26/109 (23%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L Y TE+ ++ FE +G I + ++L+ D + N+
Sbjct: 307 LYVGSLHYNITEAMLRGIFEPFGKI---------------------DNIQLMMDTDANRS 345
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD-----VERGRTVPNW 243
+GY FI + D K A Q +G +L GR + V+ E+G+ P++
Sbjct: 346 KGYGFITFHDAEDAKRALDQLNGFELAGRPMKVNHVTERNEQGQQAPSF 394
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 116 KAAEELKKYDPHNDPNVSG-DPY----KTLFVARLSYETTESKIKREFESYGPIKRLICN 170
K +E K N SG PY + L+V L + TE+ ++ FE++GP+
Sbjct: 304 KPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPV------ 357
Query: 171 SCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 230
E V+L D E+ +G+ F+++ H KAA ++ GR +
Sbjct: 358 ---------------ELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTI 402
Query: 231 LV 232
V
Sbjct: 403 KV 404
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 51/122 (41%), Gaps = 26/122 (21%)
Query: 116 KAAEELKKYDPHNDPNVSG-DPY----KTLFVARLSYETTESKIKREFESYGPIKRLICN 170
K +E K N SG PY + L+V L + TE+ ++ FE++GP+
Sbjct: 304 KPSEAEKNLVQSNTTGASGAGPYGAVDRKLYVGNLHFNMTETHLREIFEAFGPV------ 357
Query: 171 SCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRV 230
E V+L D E+ +G+ F+++ H KAA ++ GR +
Sbjct: 358 ---------------ELVQLPLDLESGHCKGFGFVQFAHLEHAKAAQSLNGKLEIAGRTI 402
Query: 231 LV 232
V
Sbjct: 403 KV 404
>gi|402889833|ref|XP_003908205.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Papio anubis]
Length = 691
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 258 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 317
G E+ +R + R+Q+ ++PR D+D+ +++E G +R RE E+ +
Sbjct: 169 GDSEIKERSTSRDQKQKEELKEDSKPR-----EKDKDKGKAKENGGNRHREGERERPKAR 223
Query: 318 DRPRDRDHRDDRHHRDRDRTRDRERERDR----GRERDRDRTRDRDRGRDRGRDHERDRE 373
RP D + + DR +R+RDR +RE+E DR G+E++R R RDR+R RD+G+D +R R
Sbjct: 224 ARP-DSERQKDRGNRERDRDSEREKETDRKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
Query: 374 KDRDKERDRDRTRERERDR 392
K+ + RD DR + RE D+
Sbjct: 283 KNGEHSRDLDREKNREHDK 301
>gi|219115463|ref|XP_002178527.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410262|gb|EEC50192.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 638
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 119/297 (40%), Gaps = 39/297 (13%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LF+ +L+ T + ++ F + P KV ++ D+
Sbjct: 313 PENVLFICKLNPITQDEDLELIFSRFDPTV---------------------KVEIIRDQS 351
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T K YAF E+ + AY + + +D RR+ VD + + W + T
Sbjct: 352 TGKSLQYAFAEFEEKQQAVEAYFKMNNALVDDRRIKVDFSQSVS-KIWNKYTQKMRMPTG 410
Query: 256 RVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLEL 315
GG N +G RG S + G + R+ +R R ER +S
Sbjct: 411 GPGGTFQNSASTGPGVSRGRGGRHSCQ--------GGNWQVRNDDRHRPSERSDMRSYYG 462
Query: 316 SHDRPRDRDHRDDRHHRD---RDRTRDR--ERERDRGRERDRDRTRDRDRGRDRGRDHER 370
S +R D HRD R D D RD +RER R + DR+ R RGR +
Sbjct: 463 SPNRSNDDRHRDSRRSADARKMDWQRDHRDKRERQRSDDPSSHSKGDRNGSRHRGRAGDG 522
Query: 371 DREK-DRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHG 426
DR K D DR+ RER + + G D R +S R +YDR++ K +DR G
Sbjct: 523 DRRKRDERTHEDRENDRERHYHTERDAGRIDDGRSHSVRR--EYDRVERKR-KDRTG 576
>gi|345308426|ref|XP_001506090.2| PREDICTED: death-inducer obliterator 1 [Ornithorhynchus anatinus]
Length = 2670
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 295 RERSRERGRDRERER-EKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRD 353
R R R G +E+ E + S +R + R + R RD + +R+R R+ RE++RD
Sbjct: 2375 RPRDRFEGGSKEKPLDEPETQASENR-QSRGFEERRRDRDHSKPWERDRSRNWSREKERD 2433
Query: 354 RTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDY 394
R+RD R R +D R+ +K++++ ++D+ RE ER++D+
Sbjct: 2434 WERNRDWERHREKDTNREWDKNKERNPNKDKERESERNKDW 2474
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%), Gaps = 29/118 (24%)
Query: 324 DHRDDRHH---------RDRDR--------------TRDRERERDRGRE---RDRDRTR- 356
D RD ++H R RDR T+ E + RG E RDRD ++
Sbjct: 2358 DFRDGKNHEFRNQNFEARPRDRFEGGSKEKPLDEPETQASENRQSRGFEERRRDRDHSKP 2417
Query: 357 -DRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRDSDY 413
+RDR R+ R+ ERD E++RD ER R++ RE D++ E +P++D+ +R+ D+
Sbjct: 2418 WERDRSRNWSREKERDWERNRDWERHREKDTNREWDKNKE-RNPNKDKERESERNKDW 2474
>gi|348544233|ref|XP_003459586.1| PREDICTED: hypothetical protein LOC100697480 [Oreochromis
niloticus]
Length = 304
Score = 45.1 bits (105), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 37/94 (39%), Gaps = 21/94 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+FV YE TE + F YG I + LV DK+T K
Sbjct: 38 IFVGGFPYELTEGDLICVFSQYGEIVN---------------------INLVRDKKTGKS 76
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+ FI Y R A +G K+ GR + VD
Sbjct: 77 KGFCFICYEDQRSTILAVDNFNGIKIKGRTIRVD 110
>gi|413925203|gb|AFW65135.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
gi|413925204|gb|AFW65136.1| hypothetical protein ZEAMMB73_625740 [Zea mays]
Length = 603
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
TLFV L + TT++ ++ E YGP+K +VR +K + K
Sbjct: 180 TLFVGELHWWTTDADLESELSKYGPVK---------------------EVRFFDEKASGK 218
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
+GY +++ A + +G +GR +V +V RR+G
Sbjct: 219 SKGYCQVDFYDPGAAAACKEGMNGHTFNGRPCVVAFATPNSV-----RRMG 264
>gi|402889831|ref|XP_003908204.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Papio anubis]
Length = 625
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 51/139 (36%), Positives = 83/139 (59%), Gaps = 10/139 (7%)
Query: 258 GGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSH 317
G E+ +R + R+Q+ ++PR D+D+ +++E G +R RE E+ +
Sbjct: 169 GDSEIKERSTSRDQKQKEELKEDSKPR-----EKDKDKGKAKENGGNRHREGERERPKAR 223
Query: 318 DRPRDRDHRDDRHHRDRDRTRDRERERDR----GRERDRDRTRDRDRGRDRGRDHERDRE 373
RP D + + DR +R+RDR +RE+E DR G+E++R R RDR+R RD+G+D +R R
Sbjct: 224 ARP-DSERQKDRGNRERDRDSEREKETDRKSEGGKEKERLRDRDRERDRDKGKDRDRRRV 282
Query: 374 KDRDKERDRDRTRERERDR 392
K+ + RD DR + RE D+
Sbjct: 283 KNGEHSRDLDREKNREHDK 301
>gi|21355677|ref|NP_651291.1| CG5808 [Drosophila melanogaster]
gi|4972682|gb|AAD34736.1| unknown [Drosophila melanogaster]
gi|7301211|gb|AAF56342.1| CG5808 [Drosophila melanogaster]
gi|220943598|gb|ACL84342.1| CG5808-PA [synthetic construct]
gi|220953568|gb|ACL89327.1| CG5808-PA [synthetic construct]
Length = 653
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 135/304 (44%), Gaps = 58/304 (19%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ TT+ ++ F S+G +K C+ ++ D++
Sbjct: 238 PENVLFVCKLNPVTTDDDLEIIFSSFGVLK-----------------GCE----VIRDRK 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T YAF+E+ + +AAY + D +D RR+ VD + + WR + G G+
Sbjct: 277 TGDSLQYAFVEFEDQKSCEAAYFKMDNVLIDDRRIHVDFSQSVSKVTWRGK--GRGIEGD 334
Query: 256 RVGGEEVNQRYSGREQEPSRGPSR------------------SAEPR-IREDRH---GDR 293
+ N R ++P+ G SR SAE R RE RH +R
Sbjct: 335 YRKLDFNNLRDDKDHRKPNNGRSRTEDHKERNRTEDFRNRMSSAERRKAREQRHQEQSER 394
Query: 294 DRERSRERGRDRERER-EKSL---------ELSHDRPRDRDHRDDRHHRDRDRTRDRERE 343
D ++ +R R R +E+ EKS+ + + R+R+ + R R RD T R
Sbjct: 395 DVRKNLQR-RTRSKEKDEKSVYRSKKSQNESVRENSNRERNRNEKRSSRSRDATHRRYSR 453
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR 403
ER R RD+ R R RD +++R + R +E++ +R R R RD+ + +RDR
Sbjct: 454 SRDREERRPSRPRDQLGRRSRSRD-QKERRRSRPREQN-ERRRSRSRDQTGKRPTQNRDR 511
Query: 404 GYSR 407
SR
Sbjct: 512 NDSR 515
>gi|313212785|emb|CBY36708.1| unnamed protein product [Oikopleura dioica]
Length = 374
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 130 PNVSGDPYK-TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKV 188
P+ +P K LFV +L+ TT+ ++ F +G IK
Sbjct: 176 PSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIK---------------------TA 214
Query: 189 RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
++ D+ TN+ YAFIE+ D + AY + D +D RR+ VD + WR +
Sbjct: 215 EIIRDRRTNQSLQYAFIEFATDDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKWRQWKF 273
Query: 249 GG 250
G
Sbjct: 274 QG 275
>gi|195572230|ref|XP_002104099.1| GD18627 [Drosophila simulans]
gi|194200026|gb|EDX13602.1| GD18627 [Drosophila simulans]
Length = 899
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 38/50 (76%)
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
R +D+ +ERDRDR + +++ RDR + E+DR++D+ KE+DRDR ++ ++
Sbjct: 179 RVKDKEKERDRDRDKSKEKDRDREKSKEKDRDRDKSKEKDRDRVTDKSKE 228
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 43/52 (82%)
Query: 332 RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRD 383
+D+++ RDR+R++ + ++RDR++++++DR RD+ ++ +RDR D+ KE+DRD
Sbjct: 181 KDKEKERDRDRDKSKEKDRDREKSKEKDRDRDKSKEKDRDRVTDKSKEKDRD 232
>gi|194747085|ref|XP_001955983.1| GF24975 [Drosophila ananassae]
gi|190623265|gb|EDV38789.1| GF24975 [Drosophila ananassae]
Length = 1051
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 77/151 (50%), Gaps = 37/151 (24%)
Query: 279 RSAEPRIREDRHGDRDRERSRERGRDREREREK----SLEL------------------S 316
RS E + +DRH ++R+RS++R R RE+ R K S+E S
Sbjct: 415 RSKERQRSKDRHRSKERQRSKDRQRSREKHRSKDKKQSVEKKRDRSKDRRRSKEREQKRS 474
Query: 317 HDRPRDRDHRDDRHHRDRDRTRDRERERDRG---------------RERDRDRTRDRDRG 361
+ +R R +D DR + E+ERDR RERDR R+ +++RG
Sbjct: 475 VGKEPERSSRRRSIEKDGDRKKSVEKERDRKGSVEKERRERKKSPERERDRKRSVEKERG 534
Query: 362 RDRGRDHERDREKDRDKERDRDRTRERERDR 392
R R + ERDR++ +KERDR R+ E+ERDR
Sbjct: 535 RKRSPEKERDRKRSPEKERDRKRSAEKERDR 565
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 62/96 (64%), Gaps = 4/96 (4%)
Query: 298 SRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRD 357
SR R +++ +R+KS+E + RDR ++ R+R ++ +RER+R R E++R R R
Sbjct: 483 SRRRSIEKDGDRKKSVE----KERDRKGSVEKERRERKKSPERERDRKRSVEKERGRKRS 538
Query: 358 RDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
++ RDR R E++R++ R E++RDR R E++R+
Sbjct: 539 PEKERDRKRSPEKERDRKRSAEKERDRKRSAEKERE 574
Score = 38.5 bits (88), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 37/57 (64%)
Query: 320 PRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDR 376
PR R H +DR R+++R+R ++R R +DR R+++R R +DR R E+ R KD+
Sbjct: 393 PRKEPERGREHSKDRHRSKERQRSKERQRSKDRHRSKERQRSKDRQRSREKHRSKDK 449
>gi|109101625|ref|XP_001087072.1| PREDICTED: TRAF3-interacting protein 1 isoform 1 [Macaca mulatta]
Length = 691
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 346
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 195 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 253
Query: 347 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 392
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 254 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 301
>gi|407921942|gb|EKG15076.1| hypothetical protein MPH_07759 [Macrophomina phaseolina MS6]
Length = 552
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 40/95 (42%), Gaps = 23/95 (24%)
Query: 140 LFVARLSYETTESKIKREFESYG-PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+++ L YE +E I F YG P+ V LV DKET K
Sbjct: 35 VYIGGLPYEVSEGDIVTIFSQYGEPV----------------------YVNLVRDKETGK 72
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+AF++Y R A G K+ GR + VD
Sbjct: 73 SKGFAFLKYEDQRSCDLAVDNLSGAKVMGRIISVD 107
>gi|356509477|ref|XP_003523474.1| PREDICTED: splicing factor U2af large subunit B-like [Glycine max]
Length = 600
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 310 EKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHE 369
E+ L SH +P H D D D + R R+ DRD +R RD+ R++GRD E
Sbjct: 14 EEELHNSHHQP----HPDSSPLPTHDDLTD-SKSRHGSRDYDRDSSRSRDKEREKGRDRE 68
Query: 370 RDREKDRDKERDRDRTRERE 389
R REK RD+ER++ R R+ E
Sbjct: 69 RKREKGRDREREKSRDRDSE 88
>gi|281206242|gb|EFA80431.1| Multidomain cyclophilin type peptidyl-prolyl cis-trans isomerase
[Polysphondylium pallidum PN500]
Length = 539
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/129 (24%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ +T+ ++ F S+G I+ SC ++ D
Sbjct: 248 PENVLFVCKLNPDTSSEDLELCFSSFGNIR-----SC----------------EVIRDPV 286
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
TN YAF+EY + + AY + + +D RR+ VD + + + G G
Sbjct: 287 TNDSLCYAFVEYETKKQCETAYSKMENALIDERRIHVDFCQ-----SIAKVKFGYGAKKF 341
Query: 256 RVGGEEVNQ 264
GG+ +N
Sbjct: 342 LSGGKRINS 350
>gi|328865553|gb|EGG13939.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 949
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 43/106 (40%), Gaps = 24/106 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ + + TE+ I F +GPIK L L D T +
Sbjct: 605 IYIGNIHFNLTEADIVAAFSPFGPIKSL---------------------SLSKDPATGRS 643
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRP 245
RG+ FIEY + A + + + + GR++ V R ++P P
Sbjct: 644 RGFCFIEYTYPEAAINAIQNMNQKTISGRQIKV---RQPSIPVINP 686
>gi|355565320|gb|EHH21809.1| hypothetical protein EGK_04953, partial [Macaca mulatta]
gi|355750964|gb|EHH55291.1| hypothetical protein EGM_04462, partial [Macaca fascicularis]
Length = 653
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 346
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 157 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 215
Query: 347 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 392
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 216 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 263
>gi|313227010|emb|CBY22157.1| unnamed protein product [Oikopleura dioica]
Length = 434
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 52/122 (42%), Gaps = 23/122 (18%)
Query: 130 PNVSGDPYK-TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKV 188
P+ +P K LFV +L+ TT+ ++ F +G IK
Sbjct: 236 PSADCEPDKNVLFVCKLNPITTDEDLELIFSRFGDIK---------------------TA 274
Query: 189 RLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRL 248
++ D+ TN+ YAFIE+ D + AY + D +D RR+ VD + WR +
Sbjct: 275 EIIRDRRTNQSLQYAFIEFATDDDCERAYFKMDNVLIDDRRIHVDFSQS-VAKKWRQWKF 333
Query: 249 GG 250
G
Sbjct: 334 QG 335
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P + G +L V L+Y TT +KR FE YG + GD V
Sbjct: 8 PQIDG--MTSLKVDNLTYRTTPEDLKRVFEKYGDV----------GD-----------VY 44
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
+ T + RG+AF+ + RD + A DG LDGR + V + R
Sbjct: 45 IPRHPYTRESRGFAFVRFYDKRDCEDAMDSLDGYILDGRELRVQMAR 91
>gi|390595888|gb|EIN05292.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 230
Score = 43.5 bits (101), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P + LFV+ T + EFE YGP+ R CD V +
Sbjct: 2 PPRILFVSGFHPNTRARDLAYEFERYGPLVR-----------------CD--VPAPRNPH 42
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
+N P YAF+E+ TRD + AY GR +G R+ + + WR
Sbjct: 43 SNNP--YAFVEFRSTRDAEDAYYDLHGRSFEGARLSIQWAKNPPSSVWR 89
>gi|297265216|ref|XP_002799147.1| PREDICTED: TRAF3-interacting protein 1 isoform 2 [Macaca mulatta]
gi|383417409|gb|AFH31918.1| TRAF3-interacting protein 1 isoform 2 [Macaca mulatta]
Length = 625
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 289 RHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR-- 346
R D+D+ +++E G +R RE E+ + RP D + + DR +R+RDR +RE+E DR
Sbjct: 195 REKDKDKGKAKENGGNRHREGERERPKARARP-DSERQKDRGNRERDRDSEREKETDRKS 253
Query: 347 --GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDR 392
GRE++R R RDR+R RD+G+D +R R K+ + RD DR + RE D+
Sbjct: 254 EGGREKERLRDRDRERDRDKGKDRDRRRVKNGEHSRDLDREKNREHDK 301
>gi|115477030|ref|NP_001062111.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|42408488|dbj|BAD09668.1| putative cleavage and polyadenylation specific factor [Oryza sativa
Japonica Group]
gi|113624080|dbj|BAF24025.1| Os08g0490300 [Oryza sativa Japonica Group]
gi|125561991|gb|EAZ07439.1| hypothetical protein OsI_29693 [Oryza sativa Indica Group]
gi|125603835|gb|EAZ43160.1| hypothetical protein OsJ_27752 [Oryza sativa Japonica Group]
gi|215694980|dbj|BAG90171.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 603
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 46/111 (41%), Gaps = 26/111 (23%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
TLFV L + TT++ ++ E YGP+K +VR +K + K
Sbjct: 184 TLFVGELHWWTTDADLEAELIKYGPVK---------------------EVRFFDEKASGK 222
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
+GY +++ A + +G +GR +V +V RR+G
Sbjct: 223 SKGYCQVDFYDPAVATACKEAMNGHLFNGRPCVVAFASPNSV-----RRMG 268
>gi|312381256|gb|EFR27046.1| hypothetical protein AND_06483 [Anopheles darlingi]
Length = 749
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 45/109 (41%), Gaps = 21/109 (19%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ T +S ++ F +G I C ++ DK
Sbjct: 238 PENVLFVCKLNPVTADSDLQIIFSRFGKIV-----GC----------------EVIRDKV 276
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
T YAFIE+ + + AY + D +D RR+ VD + + WR
Sbjct: 277 TGDSLQYAFIEFEDKKSCETAYFKMDNVLIDDRRIHVDFSQSVSKIKWR 325
>gi|384249020|gb|EIE22503.1| hypothetical protein COCSUDRAFT_56177 [Coccomyxa subellipsoidea
C-169]
Length = 2243
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 42/60 (70%), Gaps = 3/60 (5%)
Query: 337 TRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRD---KERDRDRTRERERDRD 393
RDRE+++++ RE+DRDR +DR RD+ R + + DRD K+R+RD RE++R++D
Sbjct: 749 DRDREKDKEKDREKDRDRDIGKDRSRDKERTKALEADGDRDRKEKQRERDSRREKDREKD 808
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 66/108 (61%), Gaps = 8/108 (7%)
Query: 287 EDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDR 346
+D+ DR+++R R+ G+DR R++E++ L D RDR + R+RD R+++RE+DR
Sbjct: 754 KDKEKDREKDRDRDIGKDRSRDKERTKALEADGDRDRKEK----QRERDSRREKDREKDR 809
Query: 347 GRERDRD----RTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERER 390
+ER R+ + RDR+R ++ ER++E R E + R +E+ +
Sbjct: 810 EKERQREREKEKVRDRERAAEKSHRSEREKESRRSVEALKSRDQEQAQ 857
>gi|281206591|gb|EFA80777.1| hypothetical protein PPL_06363 [Polysphondylium pallidum PN500]
Length = 710
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 21/94 (22%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
LFVA L + TTE +++ F +G +K L ++ ++ K
Sbjct: 172 ALFVANLEWWTTEQNLEQLFSEFGKLKNL---------------------KIFENETNGK 210
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLV 232
+GYAF+E + A ++ + ++L+G+ +++
Sbjct: 211 SKGYAFVELQSHDIARQAKEKLNNKELNGKTIII 244
>gi|396481240|ref|XP_003841191.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
gi|312217765|emb|CBX97712.1| hypothetical protein LEMA_P091210.1 [Leptosphaeria maculans JN3]
Length = 478
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 63/167 (37%), Gaps = 51/167 (30%)
Query: 100 ERRARIHKLRLEKG-----AEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKI 154
ER AR L LE AE A E LFV +L+ T + +
Sbjct: 228 EREARAQALTLEMVGDLPFAEVAPPE-----------------NVLFVCKLNPVTQDEDL 270
Query: 155 KREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMK 214
+ F +G I SC ++ DK T YAFIEY + +D +
Sbjct: 271 ELIFSRFGKIL-----SC----------------EVIRDKRTGDSLQYAFIEYANQKDCE 309
Query: 215 AAYKQADGRKLDGRRVLVDVER--GRTVPNWRP------RRLGGGLG 253
AY + DG +D R+ VD + + +WR +R GG G
Sbjct: 310 QAYFKMDGVLIDDHRIHVDFSQSVSKIADDWRDDANKKRKRAAGGFG 356
>gi|392579193|gb|EIW72320.1| hypothetical protein TREMEDRAFT_58484 [Tremella mesenterica DSM
1558]
Length = 682
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 52/131 (39%), Positives = 67/131 (51%), Gaps = 17/131 (12%)
Query: 266 YSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDH 325
S + PS G SRS P+ + R D E SR+R S D
Sbjct: 522 VSASVRSPSPGKSRSPSPKRKRAREYDSYSEDSRDR--------------SEDERYYERE 567
Query: 326 RDDRHHRDRDRTRDRERERDRGRE---RDRDRTRDRDRGRDRGRDHERDREKDRDKERDR 382
R+ +DR RTR +E ERDRG++ RD R+RDRG+D RD +D EKDR K+R+R
Sbjct: 568 RERSKSKDRRRTRGKETERDRGKDVERDRRDGGRERDRGKDVERDRVKDVEKDRVKDRER 627
Query: 383 DRTRERERDRD 393
D R +ER RD
Sbjct: 628 DEPRRKERKRD 638
>gi|308810142|ref|XP_003082380.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
gi|116060848|emb|CAL57326.1| Cyclophilin-type peptidyl-prolyl cis-trans isomerase (ISS)
[Ostreococcus tauri]
Length = 485
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 32/138 (23%)
Query: 110 LEKGAEKAAEELKKYDPHNDPNV---SGD--------PYKTLFVARLSYETTESKIKREF 158
L K A EE + + HN V GD P + LFV +L+ TT+ ++ F
Sbjct: 205 LNKDASVVEEEKRDREAHNRAVVLELIGDLPDAEAKPPEEGLFVCKLNPVTTDEDLEIIF 264
Query: 159 ESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYK 218
+G + SC+ ++ D +T GYAF+ + H + +AAY
Sbjct: 265 SRFGKVL-----SCD----------------VIRDFKTGASLGYAFVNFEHRHEAEAAYF 303
Query: 219 QADGRKLDGRRVLVDVER 236
+ D +D RRV VD +
Sbjct: 304 KMDNVLIDDRRVHVDFSQ 321
Score = 42.4 bits (98), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P + LFV +L+ TT+ ++ F +G + CD ++ D +
Sbjct: 242 PEEGLFVCKLNPVTTDEDLEIIFSRFGKVL-----------------SCD----VIRDFK 280
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTT 255
T GYAF+ + H + +AAY + D +D RRV VD + +R G GT+
Sbjct: 281 TGASLGYAFVNFEHRHEAEAAYFKMDNVLIDDRRVHVDFSQSMHHLWKNFKRFGKNGGTS 340
Query: 256 RVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLEL 315
+ + SRG R+ + G R KS +
Sbjct: 341 E-------DHDAAEGKVSSRGMKRTFQ-------------------GSGRTTFELKSNAM 374
Query: 316 SHDRPRD--RDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDH 368
H + +D+ RDRD+ R R+R RDR RE RDR+RDR GR+H
Sbjct: 375 GHISGGNAAMAMAEDKRDRDRDKGRTRDRSRDRDREHKRDRSRDR------GREH 423
>gi|327271898|ref|XP_003220724.1| PREDICTED: death-inducer obliterator 1-like [Anolis carolinensis]
Length = 2331
Score = 42.7 bits (99), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 14/103 (13%)
Query: 302 GRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRER-----ERDRGR------ER 350
GR RER + E + + P DH D+R +R D R E+DRGR ER
Sbjct: 2147 GRQRERYEGGNKEKTPEHP---DHSDNRSNRGTDDRRRDRDHTWAWEKDRGRNWNRGRER 2203
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRD 393
+ +R +++D ++R R + R+RE+D ++ +D +RTRER R+RD
Sbjct: 2204 EWERHKEKDWDKNRERGYNRERERDSERGKDWERTRERGRNRD 2246
>gi|156545118|ref|XP_001602070.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Nasonia
vitripennis]
Length = 821
Score = 42.7 bits (99), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%)
Query: 332 RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDR 372
R R+R+R++E +R R RE+DR R +D DR RD+GRD RDR
Sbjct: 64 RGRERSREKEIDRTRDREQDRSREKDLDRSRDKGRDKSRDR 104
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L V +S+ TT + F+ YG + V + D+ T
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKV---------------------VDVFIPRDRRTGD 55
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
RG+AF+ Y + + + A + DGR +DGR ++ V+ + PN P R G
Sbjct: 56 SRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIM--VQFAKYGPNAEPIRKG 104
>gi|302850201|ref|XP_002956628.1| hypothetical protein VOLCADRAFT_97651 [Volvox carteri f. nagariensis]
gi|300257989|gb|EFJ42230.1| hypothetical protein VOLCADRAFT_97651 [Volvox carteri f. nagariensis]
Length = 2827
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 51/93 (54%), Gaps = 26/93 (27%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
DRD+ER R+RGRDR+++RE+ D++R + + RE E++
Sbjct: 1794 DRDKERERQRGRDRDKDREEP-------------------EDKERGKGKSRE-----EKE 1829
Query: 352 RDRTRDRDRGRDRGRDHERDREKDRDKERDRDR 384
+ R DRGRD R +EKDR+KERDR++
Sbjct: 1830 QPRILKLGLKEDRGRD--RAQEKDREKERDREK 1860
>gi|218201347|gb|EEC83774.1| hypothetical protein OsI_29668 [Oryza sativa Indica Group]
gi|222640763|gb|EEE68895.1| hypothetical protein OsJ_27729 [Oryza sativa Japonica Group]
Length = 298
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L V +S+ TT + F+ YG + V + D+ T
Sbjct: 17 SLLVLNISFRTTADDLFPLFDRYGKV---------------------VDVFIPRDRRTGD 55
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
RG+AF+ Y + + + A + DGR +DGR ++ V+ + PN P R G
Sbjct: 56 SRGFAFVRYKYAEEAQKAIDRLDGRNVDGRNIM--VQFAKYGPNAEPIRKG 104
>gi|432097240|gb|ELK27580.1| Neurofilament heavy polypeptide, partial [Myotis davidii]
Length = 617
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 350
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 29 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 88
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 89 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 145
Query: 411 SDYDRIDSKHERDRHGERDY 430
S DR DS +RD +RD
Sbjct: 146 SPQDR-DSPQDRDSPQDRDS 164
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 350
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 65 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 124
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 125 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 181
Query: 411 SDYDRIDSKHERDRHGERDY 430
S DR DS +RD +RD
Sbjct: 182 SPQDR-DSPQDRDSPQDRDS 200
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 350
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 167 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 226
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 227 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 283
Query: 411 SDYDRIDSKHERDRHGERDY 430
S DR DS +RD +RD
Sbjct: 284 SPQDR-DSPQDRDSPQDRDS 302
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 350
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 269 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 328
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 329 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 385
Query: 411 SDYDRIDSKHERDRHGERDY 430
S DR DS +RD +RD
Sbjct: 386 SPQDR-DSPQDRDSPQDRDS 404
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 79/140 (56%), Gaps = 5/140 (3%)
Query: 292 DRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDRGRER 350
DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR +
Sbjct: 371 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQ 430
Query: 351 DRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDRD 410
DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR +DRD
Sbjct: 431 DRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSPQDRD 487
Query: 411 SDYDRIDSKHERDRHGERDY 430
S DR DS +RD +RD
Sbjct: 488 SPQDR-DSPQDRDSPQDRDS 506
Score = 42.0 bits (97), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 80/144 (55%), Gaps = 5/144 (3%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERERDR 346
D DRD + R+ +DR+ +++ D P+DRD DR +DRD +DR+ +DR
Sbjct: 1 DSSQDRDSAQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDR 60
Query: 347 GRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYS 406
+DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR
Sbjct: 61 DSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDRDSP 117
Query: 407 RDRDSDYDRIDSKHERDRHGERDY 430
+DRDS DR DS +RD +RD
Sbjct: 118 QDRDSPQDR-DSPQDRDSPQDRDS 140
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 83/147 (56%), Gaps = 7/147 (4%)
Query: 287 EDRHGDRDRERSRERG--RDREREREKSLELSHDRPRDRDHRDDRHH-RDRDRTRDRERE 343
+DR +DR+ ++R +DR+ +++ D P+DRD DR +DRD +DR+
Sbjct: 4 QDRDSAQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP 63
Query: 344 RDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDR 403
+DR +DRD +DRD +DR +RD +DRD +DRD ++R+ +D + +DR
Sbjct: 64 QDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSPQDRDSP---QDR 120
Query: 404 GYSRDRDSDYDRIDSKHERDRHGERDY 430
+DRDS DR DS +RD +RD
Sbjct: 121 DSPQDRDSPQDR-DSPQDRDSPQDRDS 146
>gi|148234998|ref|NP_001088057.1| death inducer-obliterator 1 [Xenopus laevis]
gi|52354786|gb|AAH82851.1| LOC494751 protein [Xenopus laevis]
Length = 2234
Score = 42.0 bits (97), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 256 RVGGEEVNQRYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLEL 315
+VG Q YS + Q S +P + ++D GR RER ++ +
Sbjct: 1990 KVGPPGSFQNYSDQRQ-------NSEQPWESNEFRQNKDHRNPPFEGRPRERYEGRNEKF 2042
Query: 316 SHDRPRDRDHRDDRHHRDRDRT--RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDRE 373
P D+ R DR R D +RER+R R +RDR R+ D+ RD R +E R
Sbjct: 2043 DDSEPHPPDNIPSRGFDDRRREGDPDGQRERERSRNCNRDRERNWDKNRDWQRSNEPSR- 2101
Query: 374 KDRDKERDRDRTRERE 389
D DK RDRD +E+E
Sbjct: 2102 -DWDKNRDRDANKEKE 2116
>gi|359475014|ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
Length = 609
Score = 42.0 bits (97), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 21/95 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TE ++++ FE +G + E V+L TD ET
Sbjct: 325 LYVGNLHFNITEDQLRQVFEPFGTV---------------------ELVQLPTDLETGHC 363
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDV 234
+G+ F+++ D +AA + GR + V V
Sbjct: 364 KGFGFVQFARLEDARAAQSLNGQLDIAGRTIKVSV 398
>gi|301605148|ref|XP_002932194.1| PREDICTED: hypothetical protein LOC100170167 [Xenopus (Silurana)
tropicalis]
Length = 502
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 59/104 (56%), Gaps = 5/104 (4%)
Query: 278 SRSAEPRIREDRHGDRDRERSRERGRDRE---REREKSLELSHDRPRDRDHRDDRHHRDR 334
SRS E + R R+R R+R R RDR+ RER+K E R RD D + + ++
Sbjct: 302 SRSNERGLERKRSKSRERHRTRSRSRDRKADRRERDKEKENERSRKRDYDKKGNGRDKEA 361
Query: 335 DRTRDRERERDRGRE-RDRDRTRDR-DRGRDRGRDHERDREKDR 376
DRTRDR +ER R +E +DR+ R R DR + R H R R KDR
Sbjct: 362 DRTRDRSKERRRSQEKKDREDKRHRDDRDSRKERRHSRSRSKDR 405
>gi|111226239|ref|XP_001134500.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90970421|gb|EAS66817.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 312
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 39/99 (39%), Gaps = 25/99 (25%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L++ RLS ETT+ + F YG I R D +
Sbjct: 2 SLYIGRLSVETTQKNLNDHFSKYGTITR-------------------------NDVKKTN 36
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
R YAF+EY RD A K +G L ++ V+ +G
Sbjct: 37 GRCYAFVEYKERRDADDALKALNGTTLLNSKISVEWAKG 75
>gi|390345979|ref|XP_789163.3| PREDICTED: uncharacterized protein LOC584197 [Strongylocentrotus
purpuratus]
Length = 1759
Score = 41.6 bits (96), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 59/103 (57%), Gaps = 19/103 (18%)
Query: 301 RGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDR 360
R +DRER+ E+ E R DH DR + ++DR +D + ++GRER+RDR +++D+
Sbjct: 1329 RSKDRERKHEQHKE------RKSDHDKDRKN-EQDRGKDSTEDGEQGRERERDRDQEKDK 1381
Query: 361 GRDRGRD------------HERDREKDRDKERDRDRTRERERD 391
G+D D HE+DR ++RD RDR+R R RD
Sbjct: 1382 GKDATVDGEQDRERERDREHEKDRGRERDHGRDRERDLRRVRD 1424
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 47/72 (65%)
Query: 320 PRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKE 379
P++ + D +D R++DRER+ ++ +ER D +DR +DRG+D D E+ R++E
Sbjct: 1313 PKEESCQKDEITKDGSRSKDRERKHEQHKERKSDHDKDRKNEQDRGKDSTEDGEQGRERE 1372
Query: 380 RDRDRTRERERD 391
RDRD+ +++ +D
Sbjct: 1373 RDRDQEKDKGKD 1384
>gi|449486437|ref|XP_002194548.2| PREDICTED: death-inducer obliterator 1 [Taeniopygia guttata]
Length = 2319
Score = 41.6 bits (96), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%)
Query: 326 RDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRT 385
RD H R +R R R RDR ER R++ D++R R + +D ++D E+ +D ER RDR
Sbjct: 2167 RDREHGRPWERDRGRNWNRDRDWERHREKEWDKNRDRSQNKDRDKDSERGKDWERSRDRD 2226
Query: 386 RER 388
R R
Sbjct: 2227 RTR 2229
>gi|357464471|ref|XP_003602517.1| Splicing factor-like protein [Medicago truncatula]
gi|355491565|gb|AES72768.1| Splicing factor-like protein [Medicago truncatula]
Length = 731
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 21/94 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TES+++ FE +G + E V+L D ET
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTV---------------------EVVQLPLDLETGHC 501
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+ FI++ H KAA ++ GR + V
Sbjct: 502 KGFGFIQFAHIEHAKAAQSLNGKLEIAGRTIKVS 535
>gi|328874752|gb|EGG23117.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
fasciculatum]
Length = 304
Score = 41.6 bits (96), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 45/98 (45%), Gaps = 21/98 (21%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P + L V L+ TTES + + F YG + EKV L+ D++
Sbjct: 110 PSRVLGVFGLNPRTTESDLDQVFSKYGKL---------------------EKVNLIRDRQ 148
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
T R YAFI + + D +A + + +LDGR + +D
Sbjct: 149 TRSSRCYAFIYFDNKEDAVSAKEGSLSLELDGRVIRID 186
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P + G +L V L+Y TT +KR FE YG + GD V
Sbjct: 8 PTIDG--MTSLKVDNLTYRTTPEDLKRVFERYGDV----------GD-----------VY 44
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
+ T + RG+AF+ + RD + A DG +DGR + V + R
Sbjct: 45 IPRHPYTRESRGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMAR 91
>gi|302834547|ref|XP_002948836.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
gi|300266027|gb|EFJ50216.1| hypothetical protein VOLCADRAFT_120666 [Volvox carteri f.
nagariensis]
Length = 262
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 44/107 (41%), Gaps = 22/107 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P +L V L + ++ +FE YG +K V + D
Sbjct: 15 PRVSLVVRNLPLDIRAEDLRSKFEKYGELK---------------------DVYIPRDYY 53
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER-GRTVP 241
T +PRG+ F+E+ TRD + A D ++GR + V R GR P
Sbjct: 54 TQRPRGFGFVEFKDTRDAEDAMYSLDRSTINGREISVTFSREGRKTP 100
>gi|320545415|ref|NP_001097475.2| CG7971, isoform F [Drosophila melanogaster]
gi|318069094|gb|ABW08438.2| CG7971, isoform F [Drosophila melanogaster]
Length = 1655
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 294 DRERSRERGRDREREREKSLEL--SHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERD 351
+R+RS+ER R +ER+R +S + ++P+ + ++ R R +++DR+R +++ R +D
Sbjct: 680 ERQRSKERQRSKERQRSRSKDALRCKEKPQC-NEKERSRERRRSKSKDRQRSKEKHRPKD 738
Query: 352 RDRTRD--RDRGRDRGRDHERDREKDRDKERDRDRTRERERD 391
++ D RDR DR ++++R E+ R KER R + RER +D
Sbjct: 739 EQQSVDKRRDRSTDRSKENQRSNERQRSKERQRSKERERSKD 780
>gi|409050528|gb|EKM60005.1| hypothetical protein PHACADRAFT_138409 [Phanerochaete carnosa
HHB-10118-sp]
Length = 440
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 65/157 (41%), Gaps = 32/157 (20%)
Query: 80 FAEPGDPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKT 139
AE DPL P E+AE +LR +K AE +A L+ NV P
Sbjct: 199 IAEDEDPLATLPEEEAE----------ELRRKKAAEASALTLEMVGDLPFANVR-PPENV 247
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
LFV +L+ T + ++ F +G I SC +++ DK T
Sbjct: 248 LFVCKLNPVTRDEDLELIFSRFGTIM-----SC----------------QVIRDKRTGDS 286
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
YAFIE+ D + AY + +D RR+ VD +
Sbjct: 287 LQYAFIEFDRREDAEQAYFKMQNVLVDDRRIWVDFSQ 323
>gi|357464473|ref|XP_003602518.1| Splicing factor-like protein [Medicago truncatula]
gi|355491566|gb|AES72769.1| Splicing factor-like protein [Medicago truncatula]
Length = 766
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 40/94 (42%), Gaps = 21/94 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L+V L + TES+++ FE +G + E V+L D ET
Sbjct: 463 LYVGNLHFNMTESQLREIFEPFGTV---------------------EVVQLPLDLETGHC 501
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+ FI++ H KAA ++ GR + V
Sbjct: 502 KGFGFIQFAHIEHAKAAQSLNGKLEIAGRTIKVS 535
>gi|414869233|tpg|DAA47790.1| TPA: hypothetical protein ZEAMMB73_970575 [Zea mays]
Length = 596
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 45/111 (40%), Gaps = 26/111 (23%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
TLFV L + TT++ ++ E YG +K +VR +K + K
Sbjct: 177 TLFVGELHWWTTDADLESELIKYGSVK---------------------EVRFFDEKASGK 215
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLG 249
+GY +++ A + +G +GR +V +V RR+G
Sbjct: 216 SKGYCQVDFYDPGAAAACKEAMNGHTFNGRPCVVAFATPNSV-----RRMG 261
>gi|307209128|gb|EFN86270.1| hypothetical protein EAI_15355 [Harpegnathos saltator]
Length = 182
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 15/156 (9%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRH---HRDR--DRTRDRER 342
DR +R R+R ER RDRE ER++ E R R+ + + DR RDR +R RDRE
Sbjct: 29 DRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRET 88
Query: 343 ERDRGRE----RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGD 398
ER R RE RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E
Sbjct: 89 ERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ- 147
Query: 399 PDRDRGYSRDRDSDYDRI---DSKHERDRHGERDYD 431
RDR R RD + +R +++ +RDR ER+ D
Sbjct: 148 --RDRETERQRDRETERQRDRETERQRDRETEREID 181
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 91/150 (60%), Gaps = 11/150 (7%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 344
DR +R R+R ER RDRE ER++ E +R RDR+ RD R RDR +R+R+R
Sbjct: 21 DRETERQRDRETERQRDRETERQRDRET--ERQRDRETERQRDRETERQRDRETERQRDR 78
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 404
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 79 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 135
Query: 405 YSRDRDSDYDRI---DSKHERDRHGERDYD 431
R RD + +R +++ +RDR ER D
Sbjct: 136 TERQRDRETERQRDRETERQRDRETERQRD 165
>gi|281210715|gb|EFA84881.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 542
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 39/99 (39%), Gaps = 25/99 (25%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L++ L+ ET + F YG I+R D +
Sbjct: 2 SLYIGGLTAETNARDLDNLFSVYGTIQR-------------------------NDIKKTS 36
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
R +AFIE+ RD A K +G KL G ++ V+ +G
Sbjct: 37 GRCFAFIEFKERRDADDALKALNGAKLLGSKITVEWSKG 75
>gi|156096599|ref|XP_001614333.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148803207|gb|EDL44606.1| RNA binding protein, putative [Plasmodium vivax]
Length = 322
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/98 (23%), Positives = 46/98 (46%), Gaps = 21/98 (21%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
TL+V+ LS + T S+++ FE YG I EK ++++ T +
Sbjct: 91 TLYVSNLSSKITTSRLQDIFEEYGTI---------------------EKCYVISNPITRE 129
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
R + F+ + + D A +A+ ++GR + V++ +
Sbjct: 130 SRNFGFVTFNNPDDANNAMIKANKMDIEGRIINVEIAK 167
>gi|126328783|ref|XP_001365267.1| PREDICTED: serine/arginine-rich splicing factor 4-like [Monodelphis
domestica]
Length = 491
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKI-----------------------------LEVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|386780975|ref|NP_001247807.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|355745074|gb|EHH49699.1| hypothetical protein EGM_00406 [Macaca fascicularis]
gi|380787433|gb|AFE65592.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
gi|383408863|gb|AFH27645.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKIL-----------------------------EVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|384939756|gb|AFI33483.1| serine/arginine-rich splicing factor 4 [Macaca mulatta]
Length = 494
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKIL-----------------------------EVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|281202872|gb|EFA77074.1| RNA-binding region RNP-1 domain-containing protein [Polysphondylium
pallidum PN500]
Length = 349
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 50/129 (38%), Gaps = 31/129 (24%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I+K LE+G A + Y + P+ ++V + +E E I YG I
Sbjct: 10 INKRELERGVSDKASWHQDY--------AHSPW--VYVGGMPFEMNEGDIIAVMSQYGEI 59
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
+ CN +V +KET K +G+ FI+Y R A G
Sbjct: 60 E-----DCN----------------MVRNKETGKSQGFCFIKYEDQRSTNLAVDNLTGYN 98
Query: 225 LDGRRVLVD 233
+ GR + VD
Sbjct: 99 IMGRLLRVD 107
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 46/106 (43%), Gaps = 22/106 (20%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
L V L+Y TT +KR FE YG + GD V + T +
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDV----------GD-----------VYIPRHPYTRES 39
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER-GRTVPNWR 244
RG+AF+ + RD + A DG +DGR + V + R GR +R
Sbjct: 40 RGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMARYGRPTDPYR 85
>gi|21361282|ref|NP_005617.2| serine/arginine-rich splicing factor 4 [Homo sapiens]
gi|20981726|sp|Q08170.2|SRSF4_HUMAN RecName: Full=Serine/arginine-rich splicing factor 4; AltName:
Full=Pre-mRNA-splicing factor SRP75; AltName:
Full=SRP001LB; AltName: Full=Splicing factor,
arginine/serine-rich 4
gi|12803875|gb|AAH02781.1| Splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|30583669|gb|AAP36083.1| splicing factor, arginine/serine-rich 4 [Homo sapiens]
gi|60655747|gb|AAX32437.1| splicing factor arginine/serine-rich 4 [synthetic construct]
gi|123994341|gb|ABM84772.1| splicing factor, arginine/serine-rich 4 [synthetic construct]
Length = 494
Score = 40.8 bits (94), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKIL-----------------------------EVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|332245240|ref|XP_003271770.1| PREDICTED: uncharacterized protein LOC100597914 isoform 1 [Nomascus
leucogenys]
Length = 494
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKIL-----------------------------EVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|30585347|gb|AAP36946.1| Homo sapiens splicing factor, arginine/serine-rich 4 [synthetic
construct]
gi|60652653|gb|AAX29021.1| splicing factor arginine/serine-rich 4 [synthetic construct]
Length = 495
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 37/119 (31%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
+++ RLSY+ E ++R F+ YG I E +
Sbjct: 4 VYIGRLSYQARERDVERFFKGYGKIL-----------------------------EVDLK 34
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVG 258
GY F+E+ RD A + +G+ L G RV+V+ RG PRR G G+ R G
Sbjct: 35 NGYGFVEFDDLRDADDAVYELNGKDLCGERVIVEHARG-------PRR-DGSYGSGRSG 85
>gi|399216253|emb|CCF72941.1| unnamed protein product [Babesia microti strain RI]
Length = 277
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 45/187 (24%)
Query: 85 DPLYAPPVEKAETPVERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGD-PYKTLFVA 143
+P + E E ER AR + LE + PN P LFV
Sbjct: 31 NPEFVKEFEALERIKEREARSRAVTLEILGDL-------------PNADAKPPNNVLFVC 77
Query: 144 RLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYA 203
+L+ T +K F +G I SCN +V D +T + YA
Sbjct: 78 KLNSVTEAEDLKIIFSRFGTIL-----SCN----------------VVKDYKTGESLQYA 116
Query: 204 FIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPN-WRPRRLGGG-------LGTT 255
FIE+ AY + + +D RR+ VD +++P W+ + G L +
Sbjct: 117 FIEFEKEESCTDAYFKMENVLIDDRRIHVDF--CQSIPTLWKKYKAGNITKGDYKELTHS 174
Query: 256 RVGGEEV 262
+GGE V
Sbjct: 175 TIGGERV 181
>gi|322797592|gb|EFZ19633.1| hypothetical protein SINV_07432 [Solenopsis invicta]
Length = 508
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 91/215 (42%), Gaps = 45/215 (20%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +L+ K A+ A L+ D +++ P LFV +L+ T + ++ F +G I
Sbjct: 226 IIELQKNKEAKARATILEIVGDIPDADIA-PPENVLFVCKLNPVTNDDDLEIIFSRFGKI 284
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
C ++ D +T YAFIE+ + + AY + D
Sbjct: 285 V-----GC----------------EVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVL 323
Query: 225 LDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQR-----YSGREQEPSRGPSR 279
+D RR+ VD + WR G G G + ++ ++ +S R++E SR
Sbjct: 324 IDDRRIHVDFSQSVAKMRWR----GKGKGIKYLDEDDRAKKREENYFSSRKREASR---- 375
Query: 280 SAEPRIREDRHGDRDRERSRERGRDREREREKSLE 314
DR DRD + R+ GR +E ++++S E
Sbjct: 376 --------DR--DRDNGKGRDEGRRKESDKDRSSE 400
>gi|147784275|emb|CAN68345.1| hypothetical protein VITISV_004019 [Vitis vinifera]
Length = 1121
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 382
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 415 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 472
Query: 383 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 436
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 473 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYXTLNDGYGNRDRYGDS--- 528
Query: 437 DDRGWYDHHENYEHHR 452
WY H+ EH R
Sbjct: 529 ----WYLRHDETEHQR 540
>gi|330800147|ref|XP_003288100.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
gi|325081861|gb|EGC35362.1| hypothetical protein DICPUDRAFT_78935 [Dictyostelium purpureum]
Length = 297
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 40/99 (40%), Gaps = 25/99 (25%)
Query: 139 TLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+L++ RLS +TTE + F YG I R D + +
Sbjct: 2 SLYIGRLSTDTTERHLNDHFSKYGTITR-------------------------NDVKRSN 36
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERG 237
R YAFIEY +D A K +G L ++ V+ +G
Sbjct: 37 GRCYAFIEYKEKKDADDALKALNGTTLLNSKISVEWAKG 75
>gi|58865984|ref|NP_001012204.1| TRAF3-interacting protein 1 [Rattus norvegicus]
gi|81883809|sp|Q5XIN3.1|MIPT3_RAT RecName: Full=TRAF3-interacting protein 1
gi|53734525|gb|AAH83645.1| TNF receptor-associated factor 3 interacting protein 1 [Rattus
norvegicus]
Length = 653
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 50/209 (23%)
Query: 247 RLGGGLGTTRVGGEEVNQRYSGREQEPSRG----PSRSAEP-----RIREDRHGDRDRER 297
+L G +++ +E +R E+ SRG S++ EP + E R ++
Sbjct: 109 QLIGKCCLSKLSSDEAVKRVLAGEKGDSRGRVLRTSKAQEPDNKSVKEEESRTQKEEKRS 168
Query: 298 SRERGRDREREREKSLELSHD-RPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTR 356
S + R E ++ EL D +PR+ ++RD+ + +E +RDR RE DRDR R
Sbjct: 169 SEVKERSSSAEHKQKEELKEDSKPRE---------KERDKEKAKEADRDRHREPDRDRNR 219
Query: 357 DRDRGRDRGR-DHERDR-----------------------EKDRDKERDRDRTRERERDR 392
D +R + R R +RDR EK+R K+RDRD+ ++RER R
Sbjct: 220 DGEREKARARAKQDRDRNNKDRDRETERDRDRDRRSDGGKEKERQKDRDRDKGKDRER-R 278
Query: 393 DYEVG----DPDRDRGYSRDRDSDYDRID 417
+ G DPDR++ SRD D + D
Sbjct: 279 KSKNGEHTRDPDREK--SRDADKSEKKAD 305
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 69/151 (45%), Gaps = 40/151 (26%)
Query: 279 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHR-DRDRT 337
RS+E + R + +E +E + RE+ER+K DR DRH DRDR
Sbjct: 167 RSSEVKERSSSAEHKQKEELKEDSKPREKERDKEKAKEADR--------DRHREPDRDRN 218
Query: 338 RDRERERDRGRER-DRDRT-------------------------RDRDRGRDRGRDHERD 371
RD ERE+ R R + DRDR R +DR RD+G+D ER
Sbjct: 219 RDGEREKARARAKQDRDRNNKDRDRETERDRDRDRRSDGGKEKERQKDRDRDKGKDRERR 278
Query: 372 REKDRDKERDRDRTRERERDR-----DYEVG 397
+ K+ + RD DR + R+ D+ D VG
Sbjct: 279 KSKNGEHTRDPDREKSRDADKSEKKADISVG 309
>gi|307206228|gb|EFN84308.1| hypothetical protein EAI_10098 [Harpegnathos saltator]
Length = 230
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 344
DR +R R+R ER RDRE ER++ E R RDR+ RD R RDR +R+R+R
Sbjct: 8 DRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDR 65
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 404
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 66 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 122
Query: 405 YSRDRDSDYDRI---DSKHERDRHGERDYD 431
R RD + +R +++ +RDR ER D
Sbjct: 123 TERQRDRETERQRDRETERQRDRETERQRD 152
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 90/150 (60%), Gaps = 11/150 (7%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD---HRDDRHHRDRDRTRDRERER 344
DR +R R+R ER RDRE ER++ E R RDR+ RD R RDR +R+R+R
Sbjct: 32 DRETERQRDRETERQRDRETERQRDRETE--RQRDRETERQRDRETERQRDRETERQRDR 89
Query: 345 DRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRG 404
+ R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR
Sbjct: 90 ETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRE 146
Query: 405 YSRDRDSDYDRI---DSKHERDRHGERDYD 431
R RD + +R +++ +RDR ER D
Sbjct: 147 TERQRDRETERQRDRETERQRDRETERQRD 176
>gi|332026097|gb|EGI66245.1| Peptidyl-prolyl cis-trans isomerase-like 4 [Acromyrmex echinatior]
Length = 504
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 85/211 (40%), Gaps = 37/211 (17%)
Query: 105 IHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFESYGPI 164
I +++ K A+ A L+ D +++ P LFV +L+ T + ++ F +G I
Sbjct: 208 IMEMQKNKEAKARATILEIVGDIPDADIA-PPENVLFVCKLNPVTNDDDLEIIFSRFGKI 266
Query: 165 KRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRK 224
C ++ D +T YAFIE+ + + AY + D
Sbjct: 267 V-----GC----------------EVIRDHQTGDSLQYAFIEFADRKSCEDAYFKMDNVL 305
Query: 225 LDGRRVLVDVERGRTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQEPSRGPSRSAEPR 284
+D RR+ VD + WR G G G RY + +P + + R
Sbjct: 306 IDDRRIHVDFSQSVAKMRWR----GKGKGI----------RYFDEDDKPKKREDNYSSSR 351
Query: 285 IREDRHG-DRDRERSRERGRDREREREKSLE 314
+ H D D +S+E G+ +E ++++ E
Sbjct: 352 KLDASHNRDHDNGKSKEEGKRKESDKDRGSE 382
>gi|359472695|ref|XP_002279073.2| PREDICTED: uncharacterized protein LOC100247382 [Vitis vinifera]
Length = 1119
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 382
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 462 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 519
Query: 383 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 436
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 520 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYETLNDGYGNRDRYGDS--- 575
Query: 437 DDRGWYDHHENYEHHR 452
WY H+ EH R
Sbjct: 576 ----WYLRHDETEHQR 587
>gi|297811815|ref|XP_002873791.1| hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp.
lyrata]
gi|297319628|gb|EFH50050.1| hypothetical protein ARALYDRAFT_488536 [Arabidopsis lyrata subsp.
lyrata]
Length = 812
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 45/125 (36%), Positives = 68/125 (54%), Gaps = 25/125 (20%)
Query: 338 RDRERERDRGRERDRDRTRDRDRGRD--RGRDHERDREKDRDKERDRDRTRERERDRDYE 395
RD+E+ERDR R+R+ D ++ RGRD R +D RDR K+++KE++RDR ++RE DRD E
Sbjct: 52 RDKEKERDRKRDREGDTDKEISRGRDKEREKDKTRDRVKEKEKEKERDRHKDRETDRDNE 111
Query: 396 VGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERDYDPTDQEDDRGWYDHHENYEH--HRG 453
+++D D R+ + + H EDD + E YEH +RG
Sbjct: 112 -----------KEKDKDRSRVKERASKKSH----------EDDHQTHKAAERYEHFDNRG 150
Query: 454 YGDHD 458
+ D
Sbjct: 151 LNEGD 155
Score = 39.3 bits (90), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 59/93 (63%), Gaps = 13/93 (13%)
Query: 303 RDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGR 362
RD+E+ER DR RDR+ D ++ R RD+ERE+D+ RDR + +++++ R
Sbjct: 52 RDKEKER--------DRKRDREGDTD---KEISRGRDKEREKDKT--RDRVKEKEKEKER 98
Query: 363 DRGRDHERDREKDRDKERDRDRTRERERDRDYE 395
DR +D E DR+ +++K++DR R +ER + +E
Sbjct: 99 DRHKDRETDRDNEKEKDKDRSRVKERASKKSHE 131
>gi|70946190|ref|XP_742836.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56522033|emb|CAH76281.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 288
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 178 SRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
S+ G+P D V LV DKET K +GY F+ Y R A +G KL + ++VD
Sbjct: 57 SQFGEPID--VNLVRDKETGKSKGYCFLAYEDQRSTILAVDNFNGFKLLDKPLVVD 110
>gi|297737836|emb|CBI27037.3| unnamed protein product [Vitis vinifera]
Length = 998
Score = 40.0 bits (92), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 35/136 (25%)
Query: 342 RERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDR------------------- 382
+ERDR +R+ DR R R++ DRG D E DR + +++ERDR
Sbjct: 341 KERDRSMDREMDRNRKREK--DRGTDREMDRGRKQERERDRSWDRDRARERDRNRNRDID 398
Query: 383 -DRTRERERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHE----RDRHGERD-YDPTDQE 436
+ R+R RDR E G RDR + RDS+ DR+ H+ D +G RD Y +
Sbjct: 399 WENDRDRARDRKSERG-SGRDRSRDKVRDSESDRVSRHHKYETLNDGYGNRDRYGDS--- 454
Query: 437 DDRGWYDHHENYEHHR 452
WY H+ EH R
Sbjct: 455 ----WYLRHDETEHQR 466
>gi|427797867|gb|JAA64385.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 300
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 46/107 (42%), Gaps = 23/107 (21%)
Query: 130 PNVSGDPYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVR 189
P + G +L V L+Y TT +KR FE YG + GD V
Sbjct: 8 PTIDG--MTSLKVDNLTYRTTPEDLKRVFERYGDV----------GD-----------VY 44
Query: 190 LVTDKETNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVER 236
+ T + RG+AF+ + RD + A DG +DGR + V + R
Sbjct: 45 IPRHPYTRESRGFAFVRFYDKRDCEDAMDALDGYMMDGRELRVQMAR 91
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 39.7 bits (91), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 33/46 (71%), Gaps = 5/46 (10%)
Query: 321 RDRDHRDDRHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGR 366
RDRD +DRDR +DRERERD+ R R++D+ RD++R +DR R
Sbjct: 396 RDRDK-----EKDRDRGKDRERERDKERNREKDKERDKERSKDRER 436
>gi|348503678|ref|XP_003439391.1| PREDICTED: WD repeat-containing protein 60 [Oreochromis niloticus]
Length = 1083
Score = 39.7 bits (91), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 63/105 (60%), Gaps = 4/105 (3%)
Query: 338 RDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER-DRDRTRERERDRDYEV 396
+++ R+ + ERDRD+ R RD+ ++R RD +R RE+DR K R D D+ R+RE ++D E+
Sbjct: 120 KEKRRDLEEKHERDRDKERHRDKEKERVRDRDRHREEDRSKRRDDGDKERKRE-EQDREL 178
Query: 397 GDPDRDRGYSRDRDSDYDRIDSKH--ERDRHGERDYDPTDQEDDR 439
D R + R+ +I+ H E+DRH ER+ + ED R
Sbjct: 179 RDDGERRRHKESREVRGAQIEQHHREEKDRHRERERHQNEYEDTR 223
>gi|451994412|gb|EMD86882.1| hypothetical protein COCHEDRAFT_1185111 [Cochliobolus
heterostrophus C5]
Length = 477
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 82/237 (34%), Gaps = 71/237 (29%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 224 EREARAQALTLEMVGDLPFAEVAP------------PENVLFVCKLNPVTQDEDLELIFS 271
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+G I SC ++ DK T YAFIEY + +D + AY +
Sbjct: 272 RFGKIL-----SC----------------EVIRDKRTGDSLQYAFIEYANQKDCEQAYFK 310
Query: 220 ADGRKLDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTT---------RVG-GEE 261
DG +D R+ VD + R V N + RR GG G R G G +
Sbjct: 311 MDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFGGIDNLERKRQYRDGPGRQ 370
Query: 262 VNQRYSGREQEPSRGPSRSAEPRIREDR-----------------HGDR---DRERS 298
+ P + A PR R+ H DR +R RS
Sbjct: 371 IMSDSVVNNLVADSDPPKDAAPRTRDTSRDVRRDDTRRRERRTEYHDDRFKRNRSRS 427
>gi|340716869|ref|XP_003396914.1| PREDICTED: hypothetical protein LOC100648054 [Bombus terrestris]
Length = 1036
Score = 39.7 bits (91), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 329 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
R RDR +R+R+ RDR RDR ++DR+ RDR +R +DR RDR +++R
Sbjct: 332 RDSRDRLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDR 391
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 429
RD RDR SRDR S D + R+RH RD
Sbjct: 392 PPSRDQR----SRDRPASRDRHSR----DKRDSRERHTSRD 424
>gi|440800067|gb|ELR21110.1| peptidylprolyl cis-trans isomerase, cyclophilin-type domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 558
Score = 39.7 bits (91), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 44/104 (42%), Gaps = 21/104 (20%)
Query: 136 PYKTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKE 195
P LFV +L+ T ++ F +G I SC ++ D++
Sbjct: 241 PDNVLFVCKLNPVTESHDLELIFSRFGTIL-----SC----------------EVIRDQK 279
Query: 196 TNKPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRT 239
T+ GYAFIE+ + AY + D +D RRV VD + +
Sbjct: 280 TDDSLGYAFIEFETEAQCEQAYLKMDNVLIDDRRVHVDFSQSVS 323
>gi|402075524|gb|EJT70995.1| U2 snRNP component IST3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 378
Score = 39.7 bits (91), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 40/95 (42%), Gaps = 23/95 (24%)
Query: 140 LFVARLSYETTESKIKREFESYG-PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
++ LSYE TE + F +G P+ ++LV D+ET K
Sbjct: 35 VYFGGLSYELTEGDVVTIFSQFGEPV----------------------FLKLVRDRETGK 72
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+ +++Y R A G ++ GR V VD
Sbjct: 73 SKGFGWLKYEDQRSTDLAVDNLGGAEIAGRLVRVD 107
>gi|330801236|ref|XP_003288635.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
gi|325081308|gb|EGC34828.1| hypothetical protein DICPUDRAFT_152902 [Dictyostelium purpureum]
Length = 1853
Score = 39.3 bits (90), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 13/142 (9%)
Query: 293 RDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDR---TRDRERERDRGRE 349
+DRE S RG D + + RD HRD HHR+ R + +RE DR +E
Sbjct: 1347 KDRESSH-RGSDHSNGTASIVSNGNGSSRDH-HRDKDHHRESHREHRSSEREHRSDRSKE 1404
Query: 350 RDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSRDR 409
DR D++ DR ++H DR+K+ ER++D+ R +R++++ G+ D++ RD+
Sbjct: 1405 HRSDR--DKEHRSDRDKEHRSDRDKEHRSEREKDQHRS-DRNKEHRSGERDKEHRSDRDK 1461
Query: 410 DSDYDRIDSKH----ERDRHGE 427
+ DR D +H E+D+H E
Sbjct: 1462 EHRSDR-DKEHRSEREKDQHRE 1482
>gi|350422413|ref|XP_003493157.1| PREDICTED: hypothetical protein LOC100744466 [Bombus impatiens]
Length = 1035
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 53/101 (52%), Gaps = 8/101 (7%)
Query: 329 RHHRDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRER 388
R RDR +R+R+ RDR RDR ++DR+ RDR +R +DR RDR +++R
Sbjct: 332 RDSRDRLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDR 391
Query: 389 ERDRDYEVGDPDRDRGYSRDRDSDYDRIDSKHERDRHGERD 429
RD RDR SRDR S D + R+RH RD
Sbjct: 392 PPSRDQR----SRDRPASRDRHSR----DKRDSRERHTSRD 424
Score = 39.3 bits (90), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 11/111 (9%)
Query: 265 RYSGREQEPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRD 324
R + RE++ SR S + + +DR+ RDR SR+R R+R + S DRP RD
Sbjct: 337 RLASRERQSSRDRHVSRDRHVSKDRNVSRDRHASRDRHISRDRHASRDRHTSKDRPPSRD 396
Query: 325 HRD-------DRHHRDRDRTRDRERERDRGRE----RDRDRTRDRDRGRDR 364
R DRH RD+ +R+R RDR R+ RDR+ R+R R+R
Sbjct: 397 QRSRDRPASRDRHSRDKRDSRERHTSRDRPRDGRSSRDRNDMRERRDSRNR 447
>gi|451846305|gb|EMD59615.1| hypothetical protein COCSADRAFT_126954 [Cochliobolus sativus
ND90Pr]
Length = 481
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 58/246 (23%), Positives = 83/246 (33%), Gaps = 79/246 (32%)
Query: 100 ERRARIHKLRLEKGAEKAAEELKKYDPHNDPNVSGDPYKTLFVARLSYETTESKIKREFE 159
ER AR L LE + E+ P LFV +L+ T + ++ F
Sbjct: 228 EREARAQALTLEMVGDLPFAEVAP------------PENVLFVCKLNPVTQDEDLELIFS 275
Query: 160 SYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKPRGYAFIEYMHTRDMKAAYKQ 219
+G I SC ++ DK T YAFIEY + +D + AY +
Sbjct: 276 RFGKIL-----SC----------------EVIRDKRTGDSLQYAFIEYANQKDCEQAYFK 314
Query: 220 ADGRKLDGRRVLVDVERG--------RTVPNWRPRRLGGGLGTTRVGGEEVNQRYSGREQ 271
DG +D R+ VD + R V N + RR GG G
Sbjct: 315 MDGVLIDDHRIHVDFSQSVSKIADDWRDVTNKKRRRAAGGFG------------------ 356
Query: 272 EPSRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH 331
G + ER R+ RD + S + ++ D D D
Sbjct: 357 -------------------GIDNLERKRQY-RDGPGRQIMSDSVVNNLVADSDPSKDAGS 396
Query: 332 RDRDRT 337
R RD +
Sbjct: 397 RTRDTS 402
>gi|297744453|emb|CBI37715.3| unnamed protein product [Vitis vinifera]
Length = 471
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 22/101 (21%)
Query: 331 HRDRDRTRDRERERDRGRER----------------DRDRTRDRDRGRDRGRDHERDREK 374
HRDRDR +R RER+R +E+ D+ R ++RD+ RD+ RD ER R
Sbjct: 15 HRDRDRNGERHRERERDKEKKEHRESRRSEREKSSDDKHREKERDKHRDK-RDKERTR-S 72
Query: 375 DRDKERDRDRT----RERERDRDYEVGDPDRDRGYSRDRDS 411
RD ERDR R RE+ERDRD+E D +R++ RD++S
Sbjct: 73 SRDDERDRARERTKDREKERDRDHEGRDAEREKERERDKES 113
>gi|359071808|ref|XP_003586878.1| PREDICTED: death-inducer obliterator 1 [Bos taurus]
Length = 2196
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 299 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 352
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2086 RERGRTWSRERD------WDRGRDWDRHRDKDAGRDWDRSRERNGSRDKGREWDR 2134
>gi|432859850|ref|XP_004069267.1| PREDICTED: death-inducer obliterator 1-like [Oryzias latipes]
Length = 2342
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 64/150 (42%), Gaps = 35/150 (23%)
Query: 277 PSRSAEPRIRE--------DRHGDRDRERSRERGRDR---EREREKSLELSHDRPRDRD- 324
P R + P + RHG E RE R E R +S+ +P+ +
Sbjct: 2027 PVRHSAPLLPPPMDGPLGRSRHGVHSPEHHREDLWSRHSPEVRRRRSISREDSKPQGGER 2086
Query: 325 -----------HRDDRHHRDRDRTRDRERE--------RDRGRERDRDRTRDRDRGRDRG 365
D + DR RDRE+E DRG+E+ R R+ DRGR+R
Sbjct: 2087 FSRFEEELGPGSEDRQQELSEDRRRDREKEGLHSSRLPWDRGQEKRWSREREWDRGRERE 2146
Query: 366 RDHERDREKDRDKERDRDRTRERERDRDYE 395
RDHER RE DR + RD E ER +D E
Sbjct: 2147 RDHERGRESDRSRGRD----EEEERPKDQE 2172
>gi|358415060|ref|XP_003582994.1| PREDICTED: death-inducer obliterator 1 isoform 2 [Bos taurus]
Length = 2196
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 299 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 352
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2086 RERGRTWSRERD------WDRGRDWDRHRDKDAGRDWDRSRERNGSRDKGREWDR 2134
>gi|367041712|ref|XP_003651236.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
gi|346998498|gb|AEO64900.1| hypothetical protein THITE_2111279 [Thielavia terrestris NRRL 8126]
Length = 363
Score = 38.9 bits (89), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 39/94 (41%), Gaps = 21/94 (22%)
Query: 140 LFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNKP 199
++ L YE +E I F +G +P ++LV DKET K
Sbjct: 35 IYFGGLPYELSEGDIITIFSQFG-------------------EPV--FLKLVRDKETGKS 73
Query: 200 RGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
+G+ +++Y R A G ++ GR + VD
Sbjct: 74 KGFGWLKYEDQRSTDLAVDNLGGAEIGGRLIRVD 107
>gi|440907449|gb|ELR57597.1| Death-inducer obliterator 1 [Bos grunniens mutus]
Length = 2175
Score = 38.9 bits (89), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 29/55 (52%), Positives = 33/55 (60%), Gaps = 7/55 (12%)
Query: 299 RERGRDREREREKSLELSHDRPRDRD-HRDDRHHRDRDRTRDRERERDRGRERDR 352
RERGR RER+ DR RD D HRD RD DR+R+R RD+GRE DR
Sbjct: 2065 RERGRTWSRERD------WDRGRDWDRHRDKDTGRDWDRSRERNGSRDKGREWDR 2113
>gi|194864928|ref|XP_001971177.1| GG14576 [Drosophila erecta]
gi|190652960|gb|EDV50203.1| GG14576 [Drosophila erecta]
Length = 1051
Score = 38.9 bits (89), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 73/126 (57%), Gaps = 4/126 (3%)
Query: 274 SRGPSRSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHH-- 331
SRGP ++A+ + + + R RSRER + R E S++ H + R+R
Sbjct: 338 SRGP-KAAKSDEKAAQQENVTRSRSRERKDTKSRPLEASIDSRHHKARERSAATPPRKEP 396
Query: 332 -RDRDRTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERER 390
R R+R++DR+R +++ R RDR R+R+R R ++R R ER R K+R K ++ R++E +R
Sbjct: 397 GRHRERSKDRQRSKEKHRSRDRLRSRERQRSKERQRSRERQRSKERQKSKENQRSKEIQR 456
Query: 391 DRDYEV 396
R +V
Sbjct: 457 SRSKDV 462
>gi|336274240|ref|XP_003351874.1| hypothetical protein SMAC_00421 [Sordaria macrospora k-hell]
gi|380096157|emb|CCC06204.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 594
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 46/102 (45%), Gaps = 21/102 (20%)
Query: 279 RSAEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTR 338
RS+ PR RED GD D S RDRERE DR DR DR
Sbjct: 53 RSSRPR-RED--GDFDAYSSSRSHRDRERE-------------DRYSGRDRRGPDR---- 92
Query: 339 DRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKER 380
ERE DR R DR R DRG DRG D DR DR ER
Sbjct: 93 -AEREWDRDRGADRGADRGADRGADRGADRGADRGADRGAER 133
>gi|452004911|gb|EMD97367.1| hypothetical protein COCHEDRAFT_1124800 [Cochliobolus
heterostrophus C5]
Length = 322
Score = 38.9 bits (89), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 38/95 (40%), Gaps = 23/95 (24%)
Query: 140 LFVARLSYETTESKIKREFESYG-PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+++ L +E +E I F YG P+ ++L DKET K
Sbjct: 35 IYIGGLPFELSEGDIITIFSQYGEPVW----------------------IKLARDKETGK 72
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
RG+A+I+Y R A G + R + VD
Sbjct: 73 SRGFAWIKYEDQRSCDLAVDNLGGASIMDRIIRVD 107
>gi|345562988|gb|EGX45994.1| hypothetical protein AOL_s00112g11 [Arthrobotrys oligospora ATCC
24927]
Length = 358
Score = 38.5 bits (88), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 25/95 (26%), Positives = 37/95 (38%), Gaps = 23/95 (24%)
Query: 140 LFVARLSYETTESKIKREFESYG-PIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETNK 198
+F+ L YE +E I F YG P+ + L DK+T K
Sbjct: 35 VFIGGLPYELSEGDIIAIFSQYGEPV----------------------HLHLARDKDTGK 72
Query: 199 PRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVD 233
RG+ +++Y R A G + GR + VD
Sbjct: 73 SRGFGWLKYEDQRSTNLAVDNLTGAVVLGRTIRVD 107
>gi|307213590|gb|EFN88983.1| hypothetical protein EAI_05389 [Harpegnathos saltator]
Length = 130
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 58/128 (45%), Positives = 79/128 (61%), Gaps = 10/128 (7%)
Query: 288 DRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRDRDRTRDRERERDRG 347
DR +R R+R ER RDRE ER++ E +R RDR+ R RDR +R+R+R+
Sbjct: 7 DRETERQRDRETERQRDRETERQRDRET--ERQRDRE-----TERQRDRETERQRDRETE 59
Query: 348 RERDRDRTRDRDRGRDRGRDHERDREKDRDKERDRDRTRERERDRDYEVGDPDRDRGYSR 407
R+RDR+ R RDR +R RD E +R++DR+ ER RDR ER+RDR+ E RDR R
Sbjct: 60 RQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQRDRETERQ---RDRETER 116
Query: 408 DRDSDYDR 415
RD + +R
Sbjct: 117 QRDRETER 124
>gi|449544152|gb|EMD35126.1| hypothetical protein CERSUDRAFT_116600 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 38.5 bits (88), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 20/107 (18%)
Query: 138 KTLFVARLSYETTESKIKREFESYGPIKRLICNSCNGGDSSRDGKPCDEKVRLVTDKETN 197
+ LFV+ T + EFE YGP+ R CD +N
Sbjct: 3 RILFVSGFHSATRARDLAYEFERYGPLVR-----------------CDVPAPRNPHANSN 45
Query: 198 KPRGYAFIEYMHTRDMKAAYKQADGRKLDGRRVLVDVERGRTVPNWR 244
YAF+E+ RD + AY GR +G R+ + + WR
Sbjct: 46 P---YAFVEFRSQRDAEDAYYDMHGRTFEGARLSIQWAKNPPSSVWR 89
>gi|354481959|ref|XP_003503168.1| PREDICTED: death-inducer obliterator 1 [Cricetulus griseus]
Length = 2263
Score = 38.5 bits (88), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 281 AEPRIREDRHGDRDRERSRERGRDREREREKSLELSHDRPRDRDHRDDRHHRD-----RD 335
A P RE + G R + E GR RER E D P + ++R R R+
Sbjct: 2087 ATPEFREGK-GHEYRSPAFE-GRQRERFEGGPKEKPLDEP-EAQGLENRQGRAFEDRRRE 2143
Query: 336 RTRDRERERDRGRERDRDRTRDRDRGRDRGRDHERDREKDRDKERD 381
R R+ RERD R R+ DR R+ D+GRDR + RDRE+D D+ +D
Sbjct: 2144 RGRNWSRERDWERSREWDRHREWDKGRDRSSN--RDRERDADRAKD 2187
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.136 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,822,605,401
Number of Sequences: 23463169
Number of extensions: 444012033
Number of successful extensions: 4665440
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 25800
Number of HSP's successfully gapped in prelim test: 36766
Number of HSP's that attempted gapping in prelim test: 2252700
Number of HSP's gapped (non-prelim): 658046
length of query: 501
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 354
effective length of database: 8,910,109,524
effective search space: 3154178771496
effective search space used: 3154178771496
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 79 (35.0 bits)