Query 010772
Match_columns 501
No_of_seqs 193 out of 1728
Neff 6.8
Searched_HMMs 46136
Date Fri Mar 29 04:23:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010772.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010772hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1292 Xanthine/uracil transp 100.0 1.6E-87 3.6E-92 690.3 29.2 470 24-501 1-508 (510)
2 COG2233 UraA Xanthine/uracil p 100.0 2.9E-77 6.3E-82 622.8 31.7 395 23-461 4-438 (451)
3 PRK11412 putative uracil/xanth 100.0 1.1E-71 2.3E-76 587.7 35.3 378 35-459 8-430 (433)
4 PRK10720 uracil transporter; P 100.0 3.7E-65 8E-70 540.5 34.8 376 23-459 2-408 (428)
5 TIGR03616 RutG pyrimidine util 100.0 9.2E-65 2E-69 537.3 36.8 382 21-459 16-428 (429)
6 TIGR00801 ncs2 uracil-xanthine 100.0 2E-63 4.4E-68 526.2 34.1 377 31-455 1-415 (415)
7 TIGR03173 pbuX xanthine permea 100.0 8E-63 1.7E-67 520.8 32.4 373 41-457 1-406 (406)
8 PF00860 Xan_ur_permease: Perm 100.0 1E-59 2.2E-64 494.5 23.0 351 35-410 1-386 (389)
9 COG2252 Xanthine/uracil/vitami 100.0 2.3E-30 5E-35 269.2 29.5 368 21-457 5-412 (436)
10 TIGR00843 benE benzoate transp 99.9 2.5E-21 5.4E-26 201.2 30.0 298 36-377 22-347 (395)
11 COG0659 SUL1 Sulfate permease 99.9 4.5E-21 9.8E-26 209.0 28.6 302 34-382 21-370 (554)
12 PF03594 BenE: Benzoate membra 99.8 8.1E-19 1.7E-23 179.7 29.6 297 36-376 6-330 (378)
13 TIGR00815 sulP high affinity s 99.8 2.5E-17 5.3E-22 181.3 28.7 299 34-371 14-369 (563)
14 PRK11660 putative transporter; 99.8 2.2E-17 4.8E-22 181.8 27.4 309 33-371 28-389 (568)
15 COG3135 BenE Uncharacterized p 99.8 1E-16 2.2E-21 161.0 28.2 298 35-376 20-345 (402)
16 PF00916 Sulfate_transp: Sulfa 99.6 1.2E-14 2.5E-19 146.2 10.1 238 120-385 1-272 (280)
17 KOG0236 Sulfate/bicarbonate/ox 99.4 1.1E-10 2.3E-15 130.7 25.1 288 52-373 92-440 (665)
18 TIGR00834 ae anion exchange pr 98.2 0.00066 1.4E-08 77.9 26.7 294 74-386 403-799 (900)
19 KOG1172 Na+-independent Cl/HCO 98.0 0.001 2.2E-08 75.1 23.3 322 43-385 364-774 (876)
20 PF11840 DUF3360: Protein of u 97.5 0.016 3.5E-07 59.9 21.0 257 101-385 141-415 (492)
21 PF00955 HCO3_cotransp: HCO3- 93.3 0.023 4.9E-07 62.1 -0.2 201 171-387 256-481 (510)
22 COG0659 SUL1 Sulfate permease 84.6 15 0.00032 41.0 13.3 121 256-388 24-155 (554)
23 TIGR00815 sulP high affinity s 83.9 9.9 0.00022 42.4 11.7 116 257-384 18-150 (563)
24 TIGR00843 benE benzoate transp 81.4 24 0.00052 37.7 12.7 125 60-206 247-393 (395)
25 PRK11660 putative transporter; 75.3 25 0.00054 39.3 11.3 118 255-383 31-155 (568)
26 TIGR00801 ncs2 uracil-xanthine 62.8 58 0.0013 34.9 10.5 66 74-141 271-345 (415)
27 PF05977 MFS_3: Transmembrane 61.6 1.2E+02 0.0026 33.6 12.9 68 30-97 216-283 (524)
28 TIGR03173 pbuX xanthine permea 60.2 77 0.0017 33.7 10.8 67 74-141 255-329 (406)
29 PRK11412 putative uracil/xanth 59.2 84 0.0018 34.0 10.9 68 73-141 276-351 (433)
30 PF00860 Xan_ur_permease: Perm 46.7 1.6E+02 0.0035 31.1 10.6 85 61-147 257-350 (389)
31 PRK10720 uracil transporter; P 45.5 2.3E+02 0.005 30.5 11.6 67 74-141 262-336 (428)
32 PF03594 BenE: Benzoate membra 44.4 53 0.0011 34.8 6.2 114 252-369 3-127 (378)
33 COG4129 Predicted membrane pro 37.5 3.5E+02 0.0076 28.3 11.0 62 76-145 15-92 (332)
34 TIGR00834 ae anion exchange pr 35.4 5.1E+02 0.011 30.9 12.9 188 251-457 366-615 (900)
35 TIGR00822 EII-Sor PTS system, 29.4 1.2E+02 0.0025 30.7 5.8 40 349-389 163-202 (265)
36 KOG2662 Magnesium transporters 28.9 2.1E+02 0.0045 30.7 7.6 63 69-134 347-413 (414)
37 TIGR03616 RutG pyrimidine util 26.9 4.9E+02 0.011 28.0 10.4 67 74-141 282-356 (429)
38 PF04172 LrgB: LrgB-like famil 26.8 1.5E+02 0.0033 28.9 5.9 79 124-208 10-94 (215)
39 PF13142 DUF3960: Domain of un 26.5 37 0.00081 27.7 1.3 43 451-493 24-73 (87)
40 PF01914 MarC: MarC family int 25.1 6.2E+02 0.013 24.3 11.5 30 126-155 164-200 (203)
41 PRK04288 antiholin-like protei 22.4 4.5E+02 0.0098 26.0 8.3 70 133-208 36-110 (232)
42 COG3715 ManY Phosphotransferas 21.6 2E+02 0.0044 29.0 5.7 46 342-389 157-202 (265)
43 PRK10711 hypothetical protein; 21.6 3.1E+02 0.0068 27.1 7.0 70 133-208 31-105 (231)
44 COG1346 LrgB Putative effector 20.5 3.9E+02 0.0085 26.4 7.3 80 124-209 23-108 (230)
45 PF05437 AzlD: Branched-chain 20.0 3.9E+02 0.0086 22.1 6.5 15 126-140 32-46 (99)
No 1
>KOG1292 consensus Xanthine/uracil transporters [Nucleotide transport and metabolism]
Probab=100.00 E-value=1.6e-87 Score=690.34 Aligned_cols=470 Identities=61% Similarity=1.126 Sum_probs=446.1
Q ss_pred cccccCCCCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHH-HHHHHHHHHHHHHHHHHHHHhCCCCcc-----
Q 010772 24 ISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEK-AKVIQTLLFVAGLNTLLQSLFGTRLPA----- 97 (501)
Q Consensus 24 ~~y~~~d~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~-~~li~~~ll~sGi~Tllq~~~G~rlPi----- 97 (501)
+.|+++|.|||...+++|+||++.|+++++++|.++++++|.+++|. +.+||+.++++||.|++|++||.|||+
T Consensus 1 l~y~i~d~P~w~~~i~lgfQhyl~~lg~~v~iP~~lv~~m~~g~~~~~~~lIsT~~f~sGI~TllQt~fG~RLp~v~G~S 80 (510)
T KOG1292|consen 1 LHYCINDNPPWPEIILLGFQHYLVCLGTTVLIPFLLVPLMCGGDEEKAVQLISTIFFVSGITTLLQTTFGTRLPLVQGPS 80 (510)
T ss_pred CccCCCCCCCchHHHHhccchHHHHhhhhhhhhhhhcccccCChHHHHHHHHHHHhhhccHHHHHHHHhhcccccccccc
Confidence 36999999999999999999999999999999999999999999998 999999999999999999999999999
Q ss_pred -c---------------------------ccccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHh
Q 010772 98 -K---------------------------FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGL 149 (501)
Q Consensus 98 -~---------------------------~~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl 149 (501)
+ |.+.+++++|++++++.+++++|++|+.+++.|++.|+.+.+.+.++|+++
T Consensus 81 fafl~p~~~i~~~~~~~~~~~~~~~~~~~~~~~mr~iqGAlivas~vqiilG~sGl~g~l~rfi~Plti~P~v~lvgl~l 160 (510)
T KOG1292|consen 81 FAFLPPALAIISLPRFTCITTPHETDTERFQHRMREIQGALIVASLVQIILGFSGLWGNLLRFIGPLTIVPLVALVGLGL 160 (510)
T ss_pred eehhhHHHHHHhccccCCCCCcccchhHHHHHHHHHhcchHHHHHHHHHHHhhhhhHHHHHhhcCChhhhhHHHHHhhhh
Confidence 1 224578999999999999999999999999999999999999999999999
Q ss_pred hHhhcCCccchhhhHHHHHHHHHHHHHh--hhhhhc--ccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCccccccc
Q 010772 150 YEFGFPGVAKCVEIGLPQLVIIVFISQY--LPHVIK--RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASC 225 (501)
Q Consensus 150 ~~~~~~~~~~~~~v~~~~l~l~i~l~~~--~~~~~~--~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~ 225 (501)
+..+.+.++.||.++++.+++.+++++| .++... +.++.++++++++++.+.|++|.++..+|.||.++..++++|
T Consensus 161 ~~~~~~~~~~~weI~l~~~llli~fsqy~~~~~~~~~~~~~~if~~f~vll~i~ivW~~~~iLT~tgay~~~~~~t~~~~ 240 (510)
T KOG1292|consen 161 FQDGFPKLGKHWEISLPEILLLILFSQYASLPKKGFGSRRIQIFSRFPVLLAIAIVWLYCFILTITGAYPYKPTTTQSSC 240 (510)
T ss_pred HHhhhhhhhhheeecHHHHHHHHHHHHhhhcccccccccccchHhhccHHHHHHHHHHHHHHHHhccccCCCccccCCcc
Confidence 9999999999999999999999999999 533222 346688999999999999999999999999998888889999
Q ss_pred ccCcCCccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHH
Q 010772 226 RTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILL 305 (501)
Q Consensus 226 ~~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~il 305 (501)
|+|.+..++++||+.+|+|++||.|.||++....|+...+++++||+|++.+++|.+.+++++++.+|||+..||+++++
T Consensus 241 RTD~~~vi~~apWi~vPyP~QwG~P~f~~~~~f~m~aa~~va~iES~G~y~a~ar~~~a~ppP~~~inRgi~~eGig~lL 320 (510)
T KOG1292|consen 241 RTDRNGVISSAPWIRVPYPFQWGPPTFSAGLVFAMMAASLVAMIESTGDYIACARLSSATPPPPSVLNRGIGWEGIGSLL 320 (510)
T ss_pred cccHhhhhccCCceeecCCCccCCCcccHHHHHHHHHHHHHHHHHhcchHHHHHHHhcCCCCChhhhhhhhhhhhHHHHH
Confidence 99998888999999999999999999999999999999999999999999999999998887888999999999999999
Q ss_pred hhhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceee
Q 010772 306 SGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQF 385 (501)
Q Consensus 306 aglfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~ 385 (501)
+|+||+..++|.++||+|+++.||+.||++++++|++|+++|++.||++++++||.|++||++++.|+++...|+++++.
T Consensus 321 ~gl~G~gtG~Tt~~ENigll~vTKVgSRrvvQ~aa~fmI~~~i~gKFgA~fAsIP~piv~~l~c~~~~mv~avgLSnLQf 400 (510)
T KOG1292|consen 321 AGLFGTGTGSTTSVENIGLLGVTKVGSRRVVQIAAGFMIFFGIFGKFGAFFASIPDPIVGGLLCILFGMVGAVGLSNLQF 400 (510)
T ss_pred HHhhCCCccceeeccceeeEeeeeeeeeeehhhhHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHhhhhhee
Confidence 99999999999988999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccceeeehhHHHhhcchhhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcCCCCccchh
Q 010772 386 CNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDGQVRK 465 (501)
Q Consensus 386 v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~~~~~~~~~ 465 (501)
+|+++.||.+|+|+|+++|+.+|+||+++ .+|.+|+++|+++.++.++++.+.+|+++|++||++.|+ ++||
T Consensus 401 ~dlns~RNl~IlG~Sif~gLsip~yF~~~-----~~~v~Tg~~~~d~ilnvll~~~m~Vggi~A~~LDnt~~g---atr~ 472 (510)
T KOG1292|consen 401 VDLNSSRNLFILGFSIFLGLSIPQYFEQY-----PGPVHTGNGWFDDILNVLLSSRMLVGGILAFILDNTLPG---ATRE 472 (510)
T ss_pred eccccccchhhhhHHHHHhccHHHHHHhC-----CCccccCcHHHHHHHHHHhhHHHHHHHHHhhhccccCCC---CChH
Confidence 99999999999999999999999999995 558999999999999999999999999999999999994 3799
Q ss_pred hccccccccccccCCCCCCCccccCCccCccCCCCC
Q 010772 466 DRGRHWWDKFWSFKGDTRSEEFYSLPFNLNKYFPSV 501 (501)
Q Consensus 466 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 501 (501)
|||+++|++.+..++|+|+|++|+||+++||+||+.
T Consensus 473 ~RG~~~w~~~~~~~~d~~~~e~Y~lP~~~n~~f~~~ 508 (510)
T KOG1292|consen 473 QRGLRWWDKFETFNGDVRNEEFYSLPFNLNRFFPRI 508 (510)
T ss_pred hcCCcchhccccccCCccccccccCcHHHHhhcccC
Confidence 999999999999999999999999999999999974
No 2
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=100.00 E-value=2.9e-77 Score=622.79 Aligned_cols=395 Identities=28% Similarity=0.482 Sum_probs=365.1
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH----hCCCCcc-
Q 010772 23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL----FGTRLPA- 97 (501)
Q Consensus 23 ~~~y~~~d~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~----~G~rlPi- 97 (501)
+..+..|||+|+.+.+++|+||+++|+++++++|++++.+.+++++|+++++|+++++||++|++|++ +|.|+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~lglQH~lamfg~~V~VPlivg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~ 83 (451)
T COG2233 4 LIYVLVDERLPLGKLLLLGLQHLLAMFGATVLVPLLVGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSY 83 (451)
T ss_pred cccCcccccCChHHHHHHHHHHHHHHHhcchHhhHHhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCee
Confidence 34456788889999999999999999999999999999999999999999999999999999999997 4559998
Q ss_pred ---cc-----------ccc--HHHHHHHHHHHHHHHHHHHhhhhHH-HHHHhcCcchHHHHHHHHHHHhhHhhcCCccc-
Q 010772 98 ---KF-----------KRT--MRAIQGSLIVASTLQIVLGFSGLWR-NVTRFLSPLSVVPLISLVGFGLYEFGFPGVAK- 159 (501)
Q Consensus 98 ---~~-----------~~~--~~~~~Ga~ivaGli~~llg~~gl~~-~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~- 159 (501)
+| .++ .+.++|+++++|+++++++.. ++ |++|+|||+|+|.++++||++|.+++++++++
T Consensus 84 lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~~li~~~--~~~~l~rlfPPvVtG~Vi~~IGlsL~~vai~~~~G~ 161 (451)
T COG2233 84 LGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVYFLISPI--VKIRLARLFPPVVTGPVVLVIGLSLAPVAINMAGGG 161 (451)
T ss_pred EechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHH--HHHHHHHhCCCceEEeEeeeehhhhHHHHHHHhhCC
Confidence 11 234 899999999999999999974 56 99999999999999999999999999877541
Q ss_pred -------------hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccc
Q 010772 160 -------------CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCR 226 (501)
Q Consensus 160 -------------~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~ 226 (501)
++.++..+++++++++++.|+ ++|+.++|+|+++||++|+.+|.
T Consensus 162 ~~~~~~~~~~~~~~l~la~~tl~~il~~~~f~~g-------~~~~i~ILiGlv~G~~la~~~G~---------------- 218 (451)
T COG2233 162 PGAAGNPDFGSLENLGLALVTLLIILLINRFGKG-------FLRRIPILIGLVVGYLLALFMGM---------------- 218 (451)
T ss_pred CCCCCCcccCchhHHHHHHHHHHHHHHHHHHhhh-------HHHHHHHHHHHHHHHHHHHHhCC----------------
Confidence 356888899999999888765 68999999999999999999974
Q ss_pred cCcCCccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHh
Q 010772 227 TDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLS 306 (501)
Q Consensus 227 ~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ila 306 (501)
+|+++ +.++|||++|.|++||. +|||.+++++++++++.++|++|++.+++++++++..++++++|++++||++|+++
T Consensus 219 vdf~~-v~~a~w~~~P~~~~fg~-~F~~~ail~m~~v~iV~~~E~~G~i~A~~~itg~~~~~~~~l~rg~~aDGlat~ia 296 (451)
T COG2233 219 VDFSG-VAEAPWFALPTPFYFGM-AFDWGAILTMLPVAIVTIVEHTGDITATGEITGRDLDGKPRLRRGLLADGLATLIA 296 (451)
T ss_pred cCccc-cccCceeeCCcccCCCe-eecHHHHHHHHHHHHHHHHHHhhhhhhHHhHhCCcCccCcccccceeeccHHHHHH
Confidence 57776 89999999999999999 99999999999999999999999999999999987777799999999999999999
Q ss_pred hhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeec
Q 010772 307 GLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFC 386 (501)
Q Consensus 307 glfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v 386 (501)
|+||++|+|+|+ ||+|+++.||++||++..+++++++++|++||+++++++||.||+||+.+++||++..+|+|++.++
T Consensus 297 g~fg~~p~Ttfa-qNiGvv~lT~v~Sr~V~~~aavili~lgl~pk~~al~~sIP~pVlGGa~ivmFG~Ia~sGir~l~~~ 375 (451)
T COG2233 297 GLFGGFPNTTFA-QNIGVVALTGVYSRYVIAGAAVILILLGLFPKFGALIQSIPSPVLGGAMLVLFGMIAASGIRILIRN 375 (451)
T ss_pred HhcCCCCCCchh-hceeeeeeccCChhHHHHHHHHHHHHHHhhHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999 9999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCcc-ceeeehhHHHhhcch---hhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcCCCCc
Q 010772 387 NLNSFR-VKFILGFSIFIGLSV---PQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKKDG 461 (501)
Q Consensus 387 ~~~~~r-n~~ivg~sl~~Gl~~---p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~~~~~ 461 (501)
|+|++| |.+|+++++.+|++. |+++++ +|++++.+++||++.|+++||+||+++|+.++
T Consensus 376 ~~~~~~~Nl~IvAvsl~~Gig~~~~p~~~~~----------------~p~~~~~l~~sGia~g~i~AIvLNlll~~~~~ 438 (451)
T COG2233 376 KVDRSRRNLLIVAVSLGLGIGVGAVPEVFLQ----------------LPAWLRPLLSSGIALGTLTAIVLNLLLPGEKR 438 (451)
T ss_pred ccccCccceeeehHHHHhCcchhcCchhhhh----------------CcHHHHHHHhccHHHHHHHHHHHHHhcccccc
Confidence 998756 999999999999994 888887 79999999999999999999999999997533
No 3
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=100.00 E-value=1.1e-71 Score=587.73 Aligned_cols=378 Identities=19% Similarity=0.345 Sum_probs=338.8
Q ss_pred HHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc------ccc--------
Q 010772 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA------KFK-------- 100 (501)
Q Consensus 35 ~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi------~~~-------- 100 (501)
++++++|+||+++|+++++++|+++++++|+|++|+++++|++++++|++|++|+++|+|||+ +|.
T Consensus 8 ~~~~~lglQhvl~m~~~~i~vPliva~a~gl~~~~~~~li~~~l~~sGIaTllQ~~~G~rlPiv~G~Sf~~~~~~~~i~~ 87 (433)
T PRK11412 8 RESLLSGFQWFFFIFCNTVVVPPTLLSAFQLPQSSLLTLTQYAFLATALACFAQAFCGHRRAIMEGPGGLWWGTILTITL 87 (433)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCCCCeeeeCCchHHHHHHHHHHh
Confidence 589999999999999999999999999999999999999999999999999999999999999 221
Q ss_pred ----cc--HHHHHH----HHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCccc-----------
Q 010772 101 ----RT--MRAIQG----SLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAK----------- 159 (501)
Q Consensus 101 ----~~--~~~~~G----a~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~----------- 159 (501)
++ +++++| +++++|++++++|++++++|++|+|||+|+|+++++||++|.+.+++++.+
T Consensus 88 ~~~~~g~~~~~~~g~l~g~~i~~g~~~~~lg~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~~a~~~~~G~~~~~~~~~~~ 167 (433)
T PRK11412 88 GEASRGTPINDIATSLAVGIALSGVVTILIGFSGLGHRLARLFTPMVMVVFMLLLGAQLTTIFFKGMLGLPFGIADPNGK 167 (433)
T ss_pred cccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhhhHhHHHHHHhhHHHHHHHhcCCCccCcccccc
Confidence 13 445555 699999999999999999999999999999999999999999998875421
Q ss_pred ----hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHH-HHhhcCCCCCCCcccccccccCcCCccC
Q 010772 160 ----CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAH-LLTVGGAYNDAAPKTQASCRTDRAGLID 234 (501)
Q Consensus 160 ----~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~-~~g~~g~~~~~~~~~~~~~~~d~~~~v~ 234 (501)
++.+++.++.+++.++++.| +++|++++|+|+++||+++. .++. |++. +.
T Consensus 168 ~~~~~~~~a~~~l~~il~~~~~~~-------g~~~~~svLiGiv~G~v~a~~~~g~-----------------d~~~-v~ 222 (433)
T PRK11412 168 IQLPPFGLSVAVMCLVLAMIIFLP-------QRIARYSLLVGTIVGWILWAFCFPS-----------------SHSL-SG 222 (433)
T ss_pred cchHHHHHHHHHHHHHHHHHHHhh-------hHHHHHHHHHHHHHHHHHHHHHhCC-----------------Ccch-hc
Confidence 23456666666666666654 46899999999999999865 4431 4443 57
Q ss_pred CCCcccccccccccccc-cCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCC
Q 010772 235 AAPWIRVPWPFQWGAPS-FDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVN 313 (501)
Q Consensus 235 ~ap~~~~P~p~~~g~P~-f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p 313 (501)
+++|. +++||.|. ||+.+++++++++++.+.|++||++++++.++++..++++++|++.+||++|+++|+||++|
T Consensus 223 ~a~w~----~~pfG~P~~F~~~~il~~~~~~lv~~~e~iG~~~a~~~~~~~~~~~~~~l~rgi~~dGi~s~laglfg~~p 298 (433)
T PRK11412 223 ELHWQ----WFPLGSGGALEPGIILTAVITGLVNISNTYGAIRGTDVFYPQQGAGNTRYRRSFVATGFMTLITVPLAVIP 298 (433)
T ss_pred cCCce----eecCCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcccccchhhccHHHHHHHhcCCCC
Confidence 78884 45689995 99999999999999999999999999999988765557899999999999999999999999
Q ss_pred CcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCCCccc
Q 010772 314 GTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRV 393 (501)
Q Consensus 314 ~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~~~rn 393 (501)
+|+|+ ||+|+++.||++||+++.++|++++++||+||+++++++||.||+||+++++|+++..+|+|+++++|+| +||
T Consensus 299 ~tt~s-qNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~~~~~Fg~I~~~Gi~~l~~~~~~-~rn 376 (433)
T PRK11412 299 FSPFV-SSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAVMLVSYLPLLGSALVFSQQITFT-ARN 376 (433)
T ss_pred CCchh-hhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-ccc
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999999997 699
Q ss_pred eeeehhHHHhhcch---h-hhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcCCC
Q 010772 394 KFILGFSIFIGLSV---P-QYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKK 459 (501)
Q Consensus 394 ~~ivg~sl~~Gl~~---p-~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~~~ 459 (501)
.+|+|+++.+|++. | +++++ +|++++++++||+++|+++|++||+++|++
T Consensus 377 ~~ivg~sl~~Glg~~~~p~~~~~~----------------~P~~~~~~l~sgi~~g~l~AilLn~~~~~~ 430 (433)
T PRK11412 377 IYRLALPLFVGIFLMALPPVYLQD----------------LPLTLRPLLSNGLLVGILLAVLMENLIPWE 430 (433)
T ss_pred chhhHHHHHHHhhHHhCCHHHHHH----------------ChHHHHHHHcCcHHHHHHHHHHHHhhcCcc
Confidence 99999999999996 6 58887 799999999999999999999999999974
No 4
>PRK10720 uracil transporter; Provisional
Probab=100.00 E-value=3.7e-65 Score=540.45 Aligned_cols=376 Identities=22% Similarity=0.359 Sum_probs=332.0
Q ss_pred CcccccCCCCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhC-CCCcc----
Q 010772 23 SISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFG-TRLPA---- 97 (501)
Q Consensus 23 ~~~y~~~d~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G-~rlPi---- 97 (501)
+..|++|||||+++++++|+||+++|+++++++|+++ |+|+++ +++++|++|++|++++ .|+|+
T Consensus 2 ~~~~~~~~~~p~~~~~~lglQhvl~m~~~~i~~Pli~----gl~~~~-------~l~~sGi~TliQ~~~~g~rlP~~~G~ 70 (428)
T PRK10720 2 RRAIGVSERPPLLQTIPLSLQHLFAMFGATVLVPILF----HINPAT-------VLLFNGIGTLLYLFICKGKIPAYLGS 70 (428)
T ss_pred CcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhc----CCCHHH-------HHHHHHHHHHHHHHhccCccceEEeC
Confidence 5789999999999999999999999999999999985 788753 7899999999999865 59999
Q ss_pred cc----------cccHHHHHHHHHHHHHHHHHHHhh--hh-HHHHHHhcCcchHHHHHHHHHHHhhHhhcCCcc------
Q 010772 98 KF----------KRTMRAIQGSLIVASTLQIVLGFS--GL-WRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA------ 158 (501)
Q Consensus 98 ~~----------~~~~~~~~Ga~ivaGli~~llg~~--gl-~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~------ 158 (501)
+| .++|++++|+++++|+++++++++ |+ ++|++|+|||.|+|.++++||+++.+.++++.+
T Consensus 71 sfa~i~~~~~~~~~~~~~~lgav~v~Glv~ills~~~~~~g~~~l~~~fPp~v~G~~i~lIGl~L~~~~~~~~g~~~~~~ 150 (428)
T PRK10720 71 SFAFISPVLLLLPLGYEVALGGFIMCGVLFCLVALIVKKAGTGWLDVLFPPAAMGAIVAVIGLELAGVAAGMAGLLPAEG 150 (428)
T ss_pred cHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChHHHHHHHHHHHHHhHHHHHhhccccCCCC
Confidence 21 247999999999999999999986 22 578999999999999999999999999886543
Q ss_pred -----chhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCcc
Q 010772 159 -----KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLI 233 (501)
Q Consensus 159 -----~~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v 233 (501)
.++.+++.+++++++++++.|+ ++|++++++|+++||++++.+|. .|++ .+
T Consensus 151 ~~~~~~~~~lalv~l~iil~~~~~~kg-------~~~~~~iLigIvvG~ila~~lG~----------------~d~~-~v 206 (428)
T PRK10720 151 QTPDSKTIIISMVTLAVTVLGSVLFRG-------FLAIIPILIGVLVGYALSFAMGM----------------VDTT-PI 206 (428)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHhcc-------HHHHhHHHHHHHHHHHHHHHhcC----------------CCHH-Hh
Confidence 1345777777777666666554 57899999999999999998874 2444 36
Q ss_pred CCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCC
Q 010772 234 DAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVN 313 (501)
Q Consensus 234 ~~ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p 313 (501)
.+++|+++|. |+.|+||+..++.+++.+++.++|++|++.++++..+++..+++++||++.+||++|+++|+||++|
T Consensus 207 ~~a~~~~lP~---~~~P~fd~~~il~l~~~~lv~~~EsiG~~~a~~~~~~~~~~~~~~~~r~l~adGlatii~glfG~~p 283 (428)
T PRK10720 207 IEAHWFALPT---FYTPRFEWFAILTILPAALVVIAEHVGHLVVTANIVKKDLLRDPGLHRSMFANGLSTVISGFFGSTP 283 (428)
T ss_pred hcCccccCCC---CCCCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCccccchHhhhhHHHHHHHhcCCCC
Confidence 6789999994 5678999999999999999999999999999999887654346789999999999999999999999
Q ss_pred CcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccce--eeccCCCc
Q 010772 314 GTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFL--QFCNLNSF 391 (501)
Q Consensus 314 ~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l--~~v~~~~~ 391 (501)
.|+|+ ||+|+++.||++||+++.++++++++++|+||+++++++||.||+||+.+++|+++..+|+|.+ +++|++++
T Consensus 284 ~tty~-en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~~i~~fg~i~~~Gi~~l~~~~~~~~~~ 362 (428)
T PRK10720 284 NTTYG-ENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGVSLLLYGVIGASGIRVLIESKVDYNKA 362 (428)
T ss_pred ccccc-cccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCcc
Confidence 99999 9999999999999999999999999999999999999999999999999999999999999999 78999888
Q ss_pred cceeeehhHHHhhcchhhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcCCC
Q 010772 392 RVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKK 459 (501)
Q Consensus 392 rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~~~ 459 (501)
||.+|+|+++.+|++.... + ++.++.+|+..|+++|++||+++|.+
T Consensus 363 ~n~~i~~~~l~~g~~~~~~--------------------~--~~~~~~~gi~~g~~~ai~Lnlll~~~ 408 (428)
T PRK10720 363 QNLILTSVILIIGVSGAKV--------------------N--IGAAELKGMALATIVGIGLSLIFKLI 408 (428)
T ss_pred cchhHHHHHHHHHHHHHHH--------------------H--HHHHhcCcHHHHHHHHHHHHHHhccc
Confidence 8999999999999985421 1 45678899999999999999999975
No 5
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=100.00 E-value=9.2e-65 Score=537.26 Aligned_cols=382 Identities=21% Similarity=0.358 Sum_probs=333.1
Q ss_pred CCCcccccCCCCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHH-HhCCCCcc--
Q 010772 21 LPSISYCITSPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQS-LFGTRLPA-- 97 (501)
Q Consensus 21 ~~~~~y~~~d~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~-~~G~rlPi-- 97 (501)
.++..|++|||||+++++++|+||+++|+++++++|+++ |+|++ ++++++|++|++|+ .+|+|+|+
T Consensus 16 ~~~~~~~~d~~~p~~~~~~~GlQh~lam~~~~v~~Plil----gl~~~-------~tl~~sGi~TllQ~~~~G~rlP~v~ 84 (429)
T TIGR03616 16 LEHHPVAPDERLPAAQTIVMGLQHAVAMFGATVLMPLLM----GFDPN-------LTILMSGIGTLLFFLITGGRVPSYL 84 (429)
T ss_pred CcCcccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHh----CCCHh-------HHHHHHHHHHHHHHHHhCCCceeEE
Confidence 345889999999999999999999999999999999995 68875 57999999999997 47999999
Q ss_pred ----cc------c---------ccHHHHHHHHHHHHHHHHHHHhhhhH---HHHHHhcCcchHHHHHHHHHHHhhHhhcC
Q 010772 98 ----KF------K---------RTMRAIQGSLIVASTLQIVLGFSGLW---RNVTRFLSPLSVVPLISLVGFGLYEFGFP 155 (501)
Q Consensus 98 ----~~------~---------~~~~~~~Ga~ivaGli~~llg~~gl~---~~l~~~fpp~V~G~~v~lIGlsl~~~~~~ 155 (501)
+| . .++++++|+++++|++++++++++.+ ++++|+|||+|+|.++++||+++.+.+++
T Consensus 85 G~sf~f~~~~~~~~~~~~~~~~~~~~~a~ga~iv~G~i~~llg~~~~~~~~~~l~r~fpPvV~G~vv~lIGlsL~~vg~~ 164 (429)
T TIGR03616 85 GSSAAFVGAVIAATGYNGQGTNPNIALALGGIIACGLVYAAIGLVVMRTGTRWIERLMPPVVTGAVVMAIGLNLAPIAVK 164 (429)
T ss_pred cCcHHHHHHHHHHHhhcccCCcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHH
Confidence 11 0 13688999999999999999998654 88999999999999999999999999998
Q ss_pred Cccc----hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCC
Q 010772 156 GVAK----CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAG 231 (501)
Q Consensus 156 ~~~~----~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~ 231 (501)
+.++ +| .++.+++.+++++++.|+ ++|++++|+|+++||++|+.++.. +.. .+.+|++.
T Consensus 165 ~~~~~~~~~~-~al~tl~~i~l~~l~~~~-------~l~~~avLiGivvG~iva~~l~~~--~g~-------~~~vd~s~ 227 (429)
T TIGR03616 165 SVSASGFDSW-MAVLTILCIGAVAVFTRG-------MLQRLLILVGLIAAYLAYFILTNV--FGL-------GKAVDFSP 227 (429)
T ss_pred hccccccccH-HHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhh--cCC-------CccccCcc
Confidence 7642 33 566777666677777665 578999999999999999886421 100 01357764
Q ss_pred ccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCC
Q 010772 232 LIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGT 311 (501)
Q Consensus 232 ~v~~ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~ 311 (501)
+.++||+++| +|+.|+||++.++++++.+++.++|++||+.++++..+++. +++++|++.+||++|+++|++|+
T Consensus 228 -v~~a~~~~lP---~~~~p~f~~~~il~~~~~~lv~~~esiG~~~a~~~~~~~~~--~~~i~r~l~adGl~t~~agl~g~ 301 (429)
T TIGR03616 228 -ISQAAWFGLP---NFHTPVFNANAMLLIAPVALILVAENLGHFKAVAGMTGRNL--DPYMGRAFVGDGLATMLSGSVGG 301 (429)
T ss_pred -cccCccccCC---cCCCceEcHHHHHHHHHHHHHHHHHhhHHHHHHHHHhCCCC--CchhccchhhhhHHHHHHHhcCC
Confidence 6789999999 47789999999999999999999999999999999987543 34699999999999999999999
Q ss_pred CCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccce--eeccCC
Q 010772 312 VNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFL--QFCNLN 389 (501)
Q Consensus 312 ~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l--~~v~~~ 389 (501)
.|.|+|+ ||+|+++.||++||+++..+++++++++++||+++++++||.||+||+++++|+++..+|+|++ +++|+|
T Consensus 302 ~p~tt~~-en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~~i~~fg~i~~~Gi~~l~~~~~d~~ 380 (429)
T TIGR03616 302 TGVTTYA-ENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGASIVVFGLIAVAGARIWVQNKVDLT 380 (429)
T ss_pred CCCccee-eeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCcC
Confidence 9999999 9999999999999999999999999999999999999999999999999999999999999987 688998
Q ss_pred CccceeeehhHHHhhcchhhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcCCC
Q 010772 390 SFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLHKK 459 (501)
Q Consensus 390 ~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~~~ 459 (501)
++||.+|+|+++.+|++.- +.+++.+++||+++|+++|++||+++|++
T Consensus 381 ~~rn~~ivg~sl~~g~g~~----------------------~~~~~~~~~s~i~~~~~~ai~Ln~~l~~~ 428 (429)
T TIGR03616 381 QNGNLIMVAVTLVLGAGDF----------------------ALTIGAFTLGGIGTATFGAIVLNALLNRD 428 (429)
T ss_pred ccceeehhHHHHHHHhHHH----------------------HHHHHHHhhCcHHHHHHHHHHHHHhcCCC
Confidence 8889999999999999742 22356788999999999999999999964
No 6
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=100.00 E-value=2e-63 Score=526.19 Aligned_cols=377 Identities=29% Similarity=0.490 Sum_probs=338.5
Q ss_pred CCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCC---Ccc----c--c--
Q 010772 31 PPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTR---LPA----K--F-- 99 (501)
Q Consensus 31 ~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~r---lPi----~--~-- 99 (501)
|||+++++++|+||+++|+++++++|++++++. +|++|+++++|++++++|++|++|+++.++ +|. + |
T Consensus 1 ~~~~~~~~~lglQh~l~~~~~~i~~p~iv~~~~-l~~~~~~~li~at~~~sgi~Tllq~~~~~~~~~lp~~~G~sfa~i~ 79 (415)
T TIGR00801 1 RPPFLQTLVLGLQHLLAMFGGTVLVPLLVGLAP-LSAEQTQYLVSISLLTSGIGTLLQLFRTGGQIGLPSYLGSSFAFVS 79 (415)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-CCHHHHHHHHHHHHHHHHHHHHHHHhhhcCceeeeeeecCcHHHHH
Confidence 689999999999999999999999999999999 999999999999999999999999986443 466 1 1
Q ss_pred -------cccHHHHHHHHHHHHHHHHHHHhh--h-hHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCcc-----------
Q 010772 100 -------KRTMRAIQGSLIVASTLQIVLGFS--G-LWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA----------- 158 (501)
Q Consensus 100 -------~~~~~~~~Ga~ivaGli~~llg~~--g-l~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~----------- 158 (501)
.+++++++|+++++|+++++++.+ + .++|++|+|||.|+|.++++||+++.+.++++++
T Consensus 80 ~~~~~~~~~~~~~~~g~~i~~gl~~~ll~~~~~~~~~~~i~~~~Pp~v~g~iv~~IGl~L~~i~l~~~~g~~~~~~~~~~ 159 (415)
T TIGR00801 80 PMIAIGSGLGIPAIMGALIATGLVYTLLSLLIKKLGPRWLMKLFPPVVTGPVVMLIGLSLIPVAVKMAAGGEAAMSSATY 159 (415)
T ss_pred HHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCchhHHHhHHHHHHHHHHHHHHHhccCCCccccccc
Confidence 257999999999999999999985 3 3578899999999999999999999999887653
Q ss_pred ---chhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCC
Q 010772 159 ---KCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA 235 (501)
Q Consensus 159 ---~~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ 235 (501)
.++.+++.++++++++.++.|+ ++|++++++|+++||++++.+|. +|+++ +.+
T Consensus 160 ~~~~~~~vg~~~l~~~vl~~~~~~g-------~~~~~aiLigiv~g~i~a~~lg~----------------~~~~~-v~~ 215 (415)
T TIGR00801 160 GSLENLGVAFVVLALIILLNRFGKG-------FLKSISILIGILVGYILALFMGI----------------VDFSP-VID 215 (415)
T ss_pred CchhhHHHHHHHHHHHHHHHHHHhh-------HHHHHHHHHHHHHHHHHHHHcCC----------------ccchh-hcc
Confidence 1245677777777677666554 57899999999999999998874 24543 567
Q ss_pred CCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCc
Q 010772 236 APWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGT 315 (501)
Q Consensus 236 ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~t 315 (501)
+||+++|.+++|| |+||+..+.+++++++++++|++|+++++++.+++++++++++||++.+||++|+++|+||++|.|
T Consensus 216 ~~~~~lP~~~~~g-~~f~~~~~~~~~~i~lv~~~es~g~~~a~a~~~g~~~~~~~~~~r~l~adGl~~i~aglfG~~p~t 294 (415)
T TIGR00801 216 APWFSLPTPFTFG-PSFEWPAILTMLPVAIVSLVESIGDITATADVSGRDLSGDPRLHRGVLADGLATLLAGLFGGFPNT 294 (415)
T ss_pred CcccccCCccCCC-ceecHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCCCCCccccchHHHhhHHHHHHHhcCCCCCc
Confidence 8999999988888 799999999999999999999999999999998876544678999999999999999999999999
Q ss_pred ccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCCCcccee
Q 010772 316 SVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKF 395 (501)
Q Consensus 316 t~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~~~rn~~ 395 (501)
+|+ ||+|+++.||++||++..++|+++++++++||++++++.||.||+||+++++|+++..+|+|.+.+.|+|++||.+
T Consensus 295 ~~s-en~g~~~~T~~~sr~~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~~l~~~~~i~~~gi~~l~~~~~~~~r~~~ 373 (415)
T TIGR00801 295 TFA-QNIGVIALTRVASRWVIVGAAVILIALGFFPKIAALITSIPSPVLGGASIVMFGMIAASGIRILIRNKLDNRRNRN 373 (415)
T ss_pred chh-hhheeeeecCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCccCccccee
Confidence 999 9999999999999999999999999999999999999999999999999999999999999999999998789999
Q ss_pred eehhHHHhhcch---hhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhh
Q 010772 396 ILGFSIFIGLSV---PQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNT 455 (501)
Q Consensus 396 ivg~sl~~Gl~~---p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l 455 (501)
++|+|+.+|+++ |+++++ +| +++||+++|+++|++||++
T Consensus 374 i~~~s~~~g~~~~~~p~~~~~----------------~p-----~~~~g~~~g~~~ai~Ln~~ 415 (415)
T TIGR00801 374 IIAASVGLGLGVTGVPDIFGN----------------FP-----LLLSGIALAGIVAILLNLI 415 (415)
T ss_pred hHHHHHHHHHHHhccHHHHhh----------------Cc-----hhcccHHHHHHHHHHHhcC
Confidence 999999999996 887766 56 7899999999999999974
No 7
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=100.00 E-value=8e-63 Score=520.81 Aligned_cols=373 Identities=31% Similarity=0.527 Sum_probs=336.4
Q ss_pred HHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHH----HhCCCCcc------cc---------cc
Q 010772 41 GFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQS----LFGTRLPA------KF---------KR 101 (501)
Q Consensus 41 GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~----~~G~rlPi------~~---------~~ 101 (501)
|+||+++|+++++++|++++++.|+|++|+..+++++++++|++|++|+ .+|+|+|+ +| .+
T Consensus 1 ~~Qh~l~~~~~~i~~p~i~~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~ 80 (406)
T TIGR03173 1 GLQHVLAMYAGAVAVPLIVGGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGG 80 (406)
T ss_pred CccchHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhh
Confidence 6899999999999999999999999999999999999999999999998 46899999 11 25
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCcc-----------chhhhHHHHHHH
Q 010772 102 TMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA-----------KCVEIGLPQLVI 170 (501)
Q Consensus 102 ~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~-----------~~~~v~~~~l~l 170 (501)
+|++++|+++++|++++++| +.++|++|+|||+|+|.++++||+++.+.++++.. .++.+++.++++
T Consensus 81 ~~~~~~ga~~v~Gii~illg--~~~~~l~~~iPp~v~G~~i~~IGl~l~~~~~~~~~g~~~~~~~~~~~~~~l~l~~l~~ 158 (406)
T TIGR03173 81 GLGAIFGAVIVAGLFVILLA--PFFSKLVRFFPPVVTGTVITLIGLSLMPVAINWAAGGAGAPDFGSPQNLGLALLTLVI 158 (406)
T ss_pred hHHHHHHHHHHHHHHHHHHH--HHHHHHHHHCCcHHHHHHHHHHHHHHHHHHHHHhccCCCcccccchHHHHHHHHHHHH
Confidence 89999999999999999999 46799999999999999999999999988876542 134567777766
Q ss_pred HHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCccccccccccccc
Q 010772 171 IVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAP 250 (501)
Q Consensus 171 ~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~~~P~p~~~g~P 250 (501)
++++.++.| +++|++++|+++++||++++.+|.. |++. +.++||+.+|.+++|+.|
T Consensus 159 ~il~~~~~~-------~~~~~~aiLi~ivvg~iva~~~g~~----------------~~~~-i~~~~~~~~P~~~~~~~P 214 (406)
T TIGR03173 159 ILLLNRFGK-------GFLRSIAVLLGLVVGTIVAAALGMV----------------DFSG-VAEAPWFALPTPFHFGAP 214 (406)
T ss_pred HHHHHHHhh-------hHHHHhHHHHHHHHHHHHHHHhcCC----------------Cchh-hccCCeeeCCCCCcCCCC
Confidence 655555444 4678999999999999999988742 4432 567899999998889999
Q ss_pred ccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhhcc
Q 010772 251 SFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRV 330 (501)
Q Consensus 251 ~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tgv 330 (501)
+||+..+++++.+++++++|++|+++++++..+++. +++++||++.+||++|+++|+||++|.|+|+ ||+|+++.||+
T Consensus 215 ~f~~~~~~~~~~~~lv~~~esig~~~a~~~~~g~~~-~~~~~~~~l~~~Gi~~i~aglfG~~p~t~~~-~~~~~~~~tg~ 292 (406)
T TIGR03173 215 TFDLVAILTMIIVYLVSMVETTGDFLALGEITGRPI-TEKDLAGGLRADGLGSALGGLFNTFPYTSFS-QNVGLVQLTGV 292 (406)
T ss_pred eeCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC-CchhccchHHhccHHHHHHHHhCCCCCcchh-hhHHHHHHhCC
Confidence 999999999999999999999999999999887543 4678999999999999999999999999998 99999999999
Q ss_pred CchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCCCccceeeehhHHHhhcch---
Q 010772 331 GSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGFSIFIGLSV--- 407 (501)
Q Consensus 331 ~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~~~rn~~ivg~sl~~Gl~~--- 407 (501)
+||++..++|+++++++++||++++++.||.||+||+++++|+++..+|+|.+++.|+||+||++|+|+++.+|++.
T Consensus 293 ~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~~l~~~~~i~~~g~~~l~~~~~~~~rn~~i~g~~~~~g~~~~~~ 372 (406)
T TIGR03173 293 KSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGAGLVMFGMVAASGIRILSKVDFDRRRNLLIVAVSLGLGLGPTVV 372 (406)
T ss_pred CchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHhCcccCcceehhhHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999877999999999999974
Q ss_pred hhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcC
Q 010772 408 PQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLH 457 (501)
Q Consensus 408 p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~ 457 (501)
|+++++ +|++++++++||+++|+++|++||+++|
T Consensus 373 p~~~~~----------------~p~~~~~~~~~~~~~g~~~ai~l~~~~p 406 (406)
T TIGR03173 373 PEFFSQ----------------LPAWAQTLFSSGIAVGAISAILLNLLFN 406 (406)
T ss_pred HHHHHH----------------ChHHHHHHHhCcHHHHHHHHHHHHhhcC
Confidence 888877 7999999999999999999999999986
No 8
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=100.00 E-value=1e-59 Score=494.54 Aligned_cols=351 Identities=33% Similarity=0.604 Sum_probs=272.7
Q ss_pred HHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHH-hCCCCcc----------------
Q 010772 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSL-FGTRLPA---------------- 97 (501)
Q Consensus 35 ~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~-~G~rlPi---------------- 97 (501)
+|++++|+||+++|+++++++|.++++++|+ ++|+.++++++++++|++|++|++ +|+|+|+
T Consensus 1 ~~~i~~glQ~~l~m~~~~iv~P~il~~~~g~-~~~~~~li~at~l~sgi~Tllq~~~~g~~lpl~~G~s~~~~~~~~~~~ 79 (389)
T PF00860_consen 1 GKEILLGLQHFLAMFYIIIVVPLILAAAFGL-DADTAALISATFLVSGIATLLQGLPAGHRLPLVPGPSFAFIFAFMIVI 79 (389)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHTTTS------------HHHHHHHHHHHHHHHHHHTTT-----EEE-GGGHHHHHGGG
T ss_pred CccHHHHHHHHHHHHHHHHHhHHHHhhcccc-cchhhHHHHHHHHHHHHHHHHHHhcCCCceecccccchhhhhhhhccc
Confidence 5899999999999999999999999999899 777889999999999999999999 8999999
Q ss_pred c----ccccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCccch-------------
Q 010772 98 K----FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKC------------- 160 (501)
Q Consensus 98 ~----~~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~~------------- 160 (501)
+ +.+++++++|+++++|++++++++++.++|++|+|||.|.|.++++||+++.+.++++++..
T Consensus 80 g~~~~~~~~~~~~~g~~~i~gi~~~~l~~~g~~~~l~~~~pp~v~g~v~~~IGl~L~~~~~~~~~~~~~~~~~~~~~~~~ 159 (389)
T PF00860_consen 80 GMAESGGYGLQAALGAVLISGILFILLGLTGLRKRLRRLFPPVVKGAVVLLIGLSLAPIGLKNAGGIWGNPDGLLVGDGK 159 (389)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHTT-SH-HHHHH--HHHHHHHHHHHHHHHHHHHHHHTTSS---BTT-B---HH
T ss_pred ccccchhhchhhhhhHHHHHHHHHHHHHHhchHHHHHHHhChhheEeeEeeehhhhhhhHhhcccccccccccccccccc
Confidence 1 13578999999999999999999999999999999999999999999999999988765422
Q ss_pred -hhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCcc
Q 010772 161 -VEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWI 239 (501)
Q Consensus 161 -~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~ 239 (501)
..++..+++..+.++.+. ++++|++++++|+++||++++.+|.. |+++.+.++||+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~-------~~~~~~~ailigi~~g~i~~~~~g~~----------------~~~~~~~~~~~~ 216 (389)
T PF00860_consen 160 NLGLAVLTLLFILLLSLFL-------KGFLRKGAILIGIIAGWIVAAILGVV----------------DFSPSVSSAPWF 216 (389)
T ss_dssp HHHHHHHHHHHHHHHHHSS-------STTTTTHHHHHHHHHHHHHHHHHHHT----------------TSSH-HHHS-SS
T ss_pred ccccccccchhhhhhhhhh-------hhhcccccchhhhhhhhhhhhccccc----------------ccCccccccccc
Confidence 133444555555555554 45789999999999999999999853 444326789999
Q ss_pred cccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCccccc
Q 010772 240 RVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSV 319 (501)
Q Consensus 240 ~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~ 319 (501)
.+|++++|++|+||+..+++++.+++++++|++||+.++++..+++++++++++|++.+||++|+++|+||+.|.|+|+
T Consensus 217 ~~p~~~~~g~p~f~~~~i~~~~~~~lv~~~es~G~~~a~~~~~~~~~~~~~~~~r~l~~dg~~~~l~gl~G~~~~t~~~- 295 (389)
T PF00860_consen 217 SLPSPFPFGWPSFDPGAILTFLIFALVAMFESIGTIVAVARIAGKDDPRPPRIRRGLLADGLGTILAGLFGTSPTTTYS- 295 (389)
T ss_dssp --------------HHHHHHHTHHHHHHHHHHHHHHHHHHHHHTS-TCCCCCHHHHHHHHHHHHHHHHHHT---EEE-H-
T ss_pred ccccccccccccccHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCCccchhhcccceeeeeeeeechhhcCCCCcccc-
Confidence 9999999999999999999999999999999999999999999987766889999999999999999999999999999
Q ss_pred chhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCCCccceeeehh
Q 010772 320 ENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLNSFRVKFILGF 399 (501)
Q Consensus 320 ~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~~~rn~~ivg~ 399 (501)
||+|+++.||++|||++..+++++++++++||++++++.||.||+||++++++|+++++|+|++++.|+||.||.+++++
T Consensus 296 en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~IP~~v~gg~~lv~~g~i~~~gi~~i~~~~~~~~r~~~iv~~ 375 (389)
T PF00860_consen 296 ENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFASIPSPVIGGPLLVLFGMIMMSGIRNIDWVDLDSARNAFIVGL 375 (389)
T ss_dssp HHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTTS-HHHHHHHHHHHHHHHHHHHHHHHHHTTS-SHHHHHHHHH
T ss_pred ccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHHHHHHHhccchHHHHHHHHHHHhHhheecccCccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998999999999
Q ss_pred HHHhhcchhhh
Q 010772 400 SIFIGLSVPQY 410 (501)
Q Consensus 400 sl~~Gl~~p~~ 410 (501)
++.+|++++.+
T Consensus 376 ~l~~g~~i~~~ 386 (389)
T PF00860_consen 376 SLPLGLSIAFG 386 (389)
T ss_dssp HHHHHHH----
T ss_pred hHHHHHHHhcc
Confidence 99999987643
No 9
>COG2252 Xanthine/uracil/vitamin C permease [Nucleotide transport and metabolism]
Probab=99.98 E-value=2.3e-30 Score=269.16 Aligned_cols=368 Identities=15% Similarity=0.185 Sum_probs=279.9
Q ss_pred CCCcccccCCCCC-hHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--
Q 010772 21 LPSISYCITSPPP-WPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA-- 97 (501)
Q Consensus 21 ~~~~~y~~~d~pp-~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi-- 97 (501)
.-+..|+++|+.. .++|++.|++++++|.|...++|.++++ .|+|. ..+..+|+++++++|+++.++ +|+|+
T Consensus 5 ~~~~~F~l~~~~t~vrtEiiAGlTTFltM~YIl~VnP~IL~~-ag~~~---~av~~AT~l~a~~gs~~mgl~-An~P~al 79 (436)
T COG2252 5 DLDRFFKLKEHGTTVRTEVIAGLTTFLTMAYIVFVNPQILGA-AGMPV---GAVFVATCLAAAIGSIAMGLY-ANLPIAL 79 (436)
T ss_pred HHHHHhCccccCchHHHHHHHHHHHHHHHHHhheecHHHHHh-cCCCc---hhHHHHHHHHHHHHHHHHHHH-HcCchhh
Confidence 4467899999986 9999999999999999999999999987 56774 466779999999999999998 79999
Q ss_pred -------c---c------cccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcch-------HHHHHHHHHHHhhHhhc
Q 010772 98 -------K---F------KRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLS-------VVPLISLVGFGLYEFGF 154 (501)
Q Consensus 98 -------~---~------~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V-------~G~~v~lIGlsl~~~~~ 154 (501)
+ | ...||+++|+++++|+++++++++|+|+|++|.+|... +|.++.+||+.....-.
T Consensus 80 apgmglnAfFaftvv~~~gi~wq~AL~aVF~sGiif~ils~t~iR~~ii~~IP~~lk~ai~aGIGlFia~IgL~~~Givv 159 (436)
T COG2252 80 APGMGLNAFFAFTVVLGMGLSWQVALGAVFLSGIIFLLLSLTGIREWIINAIPRSLKLAIGAGIGLFIALIGLKNAGIVV 159 (436)
T ss_pred cchhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhCCeEE
Confidence 1 1 13799999999999999999999999999999999754 55666666665333322
Q ss_pred CC---------ccc-hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccc
Q 010772 155 PG---------VAK-CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQAS 224 (501)
Q Consensus 155 ~~---------~~~-~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~ 224 (501)
.+ +.+ ...++++.+++++.+ ..+|+ +.+++++++..+++++++|... .
T Consensus 160 ~~~~tlv~LG~~~~p~vll~i~G~~l~~~L--~~~~i---------~Gaili~i~~~t~~g~~~g~~~--~--------- 217 (436)
T COG2252 160 ANPATLVALGDFTSPGVLLAILGLLLIIVL--VSRKI---------KGAILIGILVTTILGIILGIDV--H--------- 217 (436)
T ss_pred ecCcceEEeecCCCchHHHHHHHHHHHHHH--HHhhc---------cHhhhHHHHHHHHHHHHhcccc--c---------
Confidence 11 111 245566666666555 44443 6799999999999999998521 0
Q ss_pred cccCcCCccCCCCccccccccccccc--ccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCC--CCCcCCCcceehhh
Q 010772 225 CRTDRAGLIDAAPWIRVPWPFQWGAP--SFDAGEAFAMMMASFVALVESTGAFFAVARYASATP--MPPSVLSRGVGWQG 300 (501)
Q Consensus 225 ~~~d~~~~v~~ap~~~~P~p~~~g~P--~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~--~~~~~i~r~l~adG 300 (501)
+.+.....|.. .|...+.+.. ...+..+...+...+++.+|++|++.++++..+..+ .+.++.+|.+.+|+
T Consensus 218 ----~~~~~~~~p~~-~~~~~~~d~~~~~~~~~~~~~if~f~~~~~FD~~GTl~gv~~~ag~~~~~g~~~~~~~al~~D~ 292 (436)
T COG2252 218 ----FGGLVGAPPSL-SPIFGQLDLSGNLSLAAFAPVIFTFFFVDLFDTLGTLIGVASKAGLLDKNGKMPRIGKALLADS 292 (436)
T ss_pred ----ccccccCCCCc-cchhhHhhhccchhhHHHHHHHHHHHHHHHhcchHHHHHHHHhcCCcCCCCCccccchHHHHhH
Confidence 00000111110 1111111111 112455566788999999999999999999887433 23578999999999
Q ss_pred hHHHHhhhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhc
Q 010772 301 VGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGL 380 (501)
Q Consensus 301 l~~ilaglfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi 380 (501)
+++++++++|+.+.|+|. |+...++..|.+.-.....+-++++.+.+.| +...+|..+.+++++++ |.++.+++
T Consensus 293 v~t~~ga~~GtS~~t~yI-ESaaGva~GgrTGltavv~g~lFl~~lf~~P----l~~~vP~~AtapaLi~v-G~lM~~~v 366 (436)
T COG2252 293 VATVVGALFGTSTVTAYI-ESAAGVAAGGRTGLTAVVTGLLFLLSLFFSP----LAALVPGYATAPALIIV-GALMLSSV 366 (436)
T ss_pred HHHHHHHhcCCcchhhhh-hcccccccccccccHHHHHHHHHHHHHHHHH----HHHhCcHhhhhHHHHHH-HHHHHhhh
Confidence 999999999999999999 9999999888888887888888877754444 99999999999999987 77777665
Q ss_pred cceeeccCCCccceeeehhHHHhhcchhhhhhhhhhhcCCCCccccccccccccccccccchhHHHHHHHHHHhhcC
Q 010772 381 SFLQFCNLNSFRVKFILGFSIFIGLSVPQYFNEYTAINGFGPVHTSGRWFNDMVNVPFSSEPFVAGCVAFFLDNTLH 457 (501)
Q Consensus 381 ~~l~~v~~~~~rn~~ivg~sl~~Gl~~p~~~~~~~~~~~~~p~~~~~~~lp~~~~~~l~sgi~~g~l~ai~Ln~l~~ 457 (501)
+++||+|..+ ++|.++... .+| +++...+|++.|.+.+.+++....
T Consensus 367 ---~~id~~d~~e------------a~PaF~tiv--------------~mp--lTySIa~Gia~Gfi~y~i~k~~~g 412 (436)
T COG2252 367 ---KQIDWSDFTE------------AVPAFLTIV--------------MMP--LTYSIADGIAFGFISYVILKVFTG 412 (436)
T ss_pred ---ccCCchhhhh------------hhHHHHHHH--------------HHH--HHHHHHhhHHHHHHHHHHHHHHhh
Confidence 5788988665 458877764 255 678899999999999999998554
No 10
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=99.90 E-value=2.5e-21 Score=201.20 Aligned_cols=298 Identities=15% Similarity=0.234 Sum_probs=217.5
Q ss_pred HHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--cc-------------c
Q 010772 36 EAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA--KF-------------K 100 (501)
Q Consensus 36 ~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi--~~-------------~ 100 (501)
..+..|+-.+++-+.+.+++-+-.+++.|+|++|++.++++..+.+|++|++|+++ +|+|+ +| .
T Consensus 22 s~~~aG~va~lvg~~~~~~iv~~a~~~~g~s~aq~~swl~a~~~~~Gl~ti~lS~~-~r~Pi~~awStPGaAll~~~~~~ 100 (395)
T TIGR00843 22 PTLIAGFLAVLIGYAGPAAIFFQAAIKAGASTAMIIGWITAIGIAAAVSGIFLSIR-FKTPVLTAWSAPGAALLVTGFPG 100 (395)
T ss_pred HHHHHHHHHHHHhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCeeeecCchHHHHHHHhcCC
Confidence 46789999999998887666555566799999999999999999999999999986 69999 22 1
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCccchhhhHHHHHHHHHHHHHhhhh
Q 010772 101 RTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPH 180 (501)
Q Consensus 101 ~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~~~~v~~~~l~l~i~l~~~~~~ 180 (501)
.+++++.|+.+++|++.+++|++|.++|++|++|+.+.+.++.-+.+...-..++...+.+.++...++..+ ..|
T Consensus 101 ~~~~eavGAfiv~g~lilllGltG~f~rl~~~IP~~Va~amLAGIlL~f~l~~~~a~~~~pll~~~mll~~l----~~~- 175 (395)
T TIGR00843 101 ISLNEAIAAFITAAALIFLCGITGLFAKLLKIIPHGIAAAMLAGILFQFGLGAFAALDGLFLICFSMLLCWL----ASK- 175 (395)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH----HHH-
Confidence 579999999999999999999999999999999999999887666555433333333344444433222221 223
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCcccccccccccccccCHHHHHHH
Q 010772 181 VIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAM 260 (501)
Q Consensus 181 ~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~il~~ 260 (501)
|+.+++++++++++|.++++..|..+ .+. .. .+ +..| .|..|+||+...+..
T Consensus 176 ------r~~Pr~avl~aLlvG~iva~~~G~~~----------------~~~-~~-~~-l~~p---~~~~P~fs~~a~~~l 227 (395)
T TIGR00843 176 ------AFAPRYAMIAALICGIAFSFALGDMN----------------PTD-LD-FK-IALP---QFIAPDFSFAHSLNL 227 (395)
T ss_pred ------HhcchHHHHHHHHHHHHHHHHhcCCC----------------ccc-cc-cc-cccc---eeeCCCCCHHHHHHH
Confidence 24578999999999999998887431 111 11 00 2223 456789998877654
Q ss_pred -HHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhhc---------c
Q 010772 261 -MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTR---------V 330 (501)
Q Consensus 261 -~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg---------v 330 (501)
++.+++.+....-.-.++.|..++++ +.|+-+.++|++|++++.||+++ -|.+.+..+= -
T Consensus 228 ~lPl~~vtm~~qnlpgiavl~aaGy~~----p~~~~~~~tGl~sll~ApfGg~~------~nlaaitaAic~G~~ah~d~ 297 (395)
T TIGR00843 228 ALPLFLVSLAGQFAPGIAALKAAGYNA----PAKPIIAAAGLAALFAAFAGGIS------IGIAAITAAICMGKDAHEDK 297 (395)
T ss_pred HHHHHHHHHHhcCchHHHHHHHcCCCC----CchHHHHHHHHHHHHHhccCCch------hhhhHHhHHHhcCcccccCc
Confidence 56777777644333345556566543 36899999999999999999997 3333333221 2
Q ss_pred CchHH-HHHHHHHHHHHHHh-hHHHHHHHhCCHHHHHHH-HHHHHHHHHh
Q 010772 331 GSRRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVGA 377 (501)
Q Consensus 331 ~SR~~-~~~ag~~lillg~~-pk~~~lia~IP~~V~ggv-li~~f~~i~~ 377 (501)
..||. .+.+|++.+++|++ +.+..+++.+|.+.+..+ -+.+++.+..
T Consensus 298 ~rR~~a~i~~Gv~yll~glfag~i~~l~~~~P~~li~~laGlAll~~~~~ 347 (395)
T TIGR00843 298 DKRWIAAAAAGIFYLLAGLFAGAITALFAALPKELIAALAGLALLGAIAG 347 (395)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
Confidence 22444 58899999999999 899999999999998887 5556677653
No 11
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=99.89 E-value=4.5e-21 Score=208.98 Aligned_cols=302 Identities=17% Similarity=0.230 Sum_probs=216.8
Q ss_pred hHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcc--------------c
Q 010772 34 WPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGT-RLPA--------------K 98 (501)
Q Consensus 34 ~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~-rlPi--------------~ 98 (501)
++..++.|+.-.+..++-.+.+.. +.|++++ ..+.++-++.++-++||. |.-+ -
T Consensus 21 l~~Dl~AGltva~valP~ama~a~----~aGv~p~-------~GLyas~i~~~v~alfGgs~~~i~GPt~a~~~v~a~~i 89 (554)
T COG0659 21 LRGDLLAGLTVAAVALPLAMAFAI----AAGVPPE-------AGLYASIVAGIIYALFGGSRGLISGPTGAFAVVLAAVI 89 (554)
T ss_pred hHHHHHHHHHHHHHHhHHHHHHHH----HcCCCHH-------HHHHHHHHHHHHHHHHcCCccceeccchhhHHHHHHHH
Confidence 677899999887766543333332 3788984 777888889999998864 3333 1
Q ss_pred c---cccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCc------cc----------
Q 010772 99 F---KRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV------AK---------- 159 (501)
Q Consensus 99 ~---~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~------~~---------- 159 (501)
. .++++.++-+.+++|++++++|++|+ +++.+++|+.|+-.++.-||+.++..+++.+ ..
T Consensus 90 ~~~~~~g~~~~~~~tllaGv~~i~~G~lRL-G~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~~~~~~~~~~~~l~ 168 (554)
T COG0659 90 ASLVETGLALAFLATLLAGVFQILLGLLRL-GRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLASKVSGFWAKVSALF 168 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchHHHHHHHH
Confidence 2 46788999999999999999999998 9999999976666666777776654433221 10
Q ss_pred ------hh---hhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcC
Q 010772 160 ------CV---EIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRA 230 (501)
Q Consensus 160 ------~~---~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~ 230 (501)
++ .++..++.+++ +.+++ ..|.++.++++++++.+++.++... + +.+
T Consensus 169 ~~~~~~~~~~~~lg~~~l~il~----~~~~~------~~~~P~~liaiv~~t~i~~~~~~~~-----~-------~~G-- 224 (554)
T COG0659 169 TVLLTINLATLLLGLLTLAILL----FLPRL------TPRIPSPLIALVLGTLIVWIFPLDS-----L-------RYG-- 224 (554)
T ss_pred HhcccccHHHHHHHHHHHHHHH----Hccch------hhhCCcHHHHHHHHHHHHHHhcCCc-----h-------hcc--
Confidence 11 22333333322 23332 1256789999999999999886421 0 011
Q ss_pred CccCCCCcccccccccccccccCHH----HHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHh
Q 010772 231 GLIDAAPWIRVPWPFQWGAPSFDAG----EAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLS 306 (501)
Q Consensus 231 ~~v~~ap~~~~P~p~~~g~P~f~~~----~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ila 306 (501)
+..++.|.. +| +|+.|.++++ .+...+.++++.++||+.+..+.+++.++ +.+.||+++++|++|+++
T Consensus 225 ~i~~~lp~~-~~---~~~~P~~~~~~~~~l~~~al~la~lg~iesllta~~~~~~~~~----~~d~nrELiaqGiaNi~s 296 (554)
T COG0659 225 EIPGSLPSG-LP---HFRLPNVSLSLLLALLPYALALALLGLLESLLTAVSFDGMTGT----KHDSNRELIAQGIANIAS 296 (554)
T ss_pred cCcccCCcC-CC---cccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCCHHHHHhhHHHHHH
Confidence 111221111 11 3455566554 44556889999999999999999998764 456799999999999999
Q ss_pred hhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHHHHHhhhccc
Q 010772 307 GLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL-FFAYVGAGGLSF 382 (501)
Q Consensus 307 glfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~-~f~~i~~~Gi~~ 382 (501)
|+||++|.|... .+......+|.+||.+.++++++++++-++ +++++..||.+++++++++ .+.++-...++.
T Consensus 297 glfgg~p~~g~~-srS~~nv~sGarT~lsgi~~a~~lll~l~~--~~~~~~~IP~a~Laavli~v~~~l~~~~~~~~ 370 (554)
T COG0659 297 GLFGGIPATGSI-SRSAINIKSGARTRLSGIIHAALLLLLLLF--LAPLVSYIPLAALAAVLILVGWGLLDWSLLKP 370 (554)
T ss_pred HHhCCccccchh-HHHHHHHHhCCcChHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHHHHHHhccHHHHHH
Confidence 999999999999 888888899999999999999988776554 7899999999999999775 555555555544
No 12
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=99.85 E-value=8.1e-19 Score=179.69 Aligned_cols=297 Identities=21% Similarity=0.293 Sum_probs=221.1
Q ss_pred HHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--cc-------------c
Q 010772 36 EAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA--KF-------------K 100 (501)
Q Consensus 36 ~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi--~~-------------~ 100 (501)
.++..|+--+++-+.+.+++-+-.+++.|++++|+..++.+..+.+|+.|+.-++. +|+|+ +| .
T Consensus 6 s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s~~q~~SWl~al~~~~Gl~~i~lSl~-yR~Pi~~AWStPGaAlL~~~~~~ 84 (378)
T PF03594_consen 6 SAVSAGFVAVLVGYTGPVAIVLQAAQAAGASPAQIASWLFALYLGMGLTSILLSLR-YRMPIVTAWSTPGAALLATSLPG 84 (378)
T ss_pred HHHHHHHHHHHhhccchHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCchhhcchHHHHHHHHhccC
Confidence 57788999999888887666666667799999999999999999999999999986 89999 33 2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCccchhhhHHHHHHHHHHHHHhhhh
Q 010772 101 RTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLPH 180 (501)
Q Consensus 101 ~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~~~~v~~~~l~l~i~l~~~~~~ 180 (501)
++++++.|+.+++|++.++.|.+|+++|+.|.+|+.+...++.-+-+...-..++.+.+++.+....++..++. ||
T Consensus 85 ~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLAGvLl~f~l~~f~a~~~~P~l~~~ml~~~l~~----~r 160 (378)
T PF03594_consen 85 YSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLAGVLLPFGLAAFTALQADPLLVGPMLAVFLLA----RR 160 (378)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH----HH
Confidence 58999999999999999999999999999999998877776544444333333444445555555554444333 33
Q ss_pred hhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCcccccccccccccccCHHHHHHH
Q 010772 181 VIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFAM 260 (501)
Q Consensus 181 ~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~il~~ 260 (501)
+.++++++.++++|.++++..|.. +... . + ..++.| .|-.|+||++.++.+
T Consensus 161 -------~~pr~av~~al~~g~~~a~~~g~~----------------~~~~-~---~-~~~~~p-~~~~P~Fs~~a~v~l 211 (378)
T PF03594_consen 161 -------FSPRYAVLAALVAGVAVAALTGQL----------------HPSA-L---Q-LSLAHP-VFTTPEFSWSALVSL 211 (378)
T ss_pred -------HcchhHHHHHHHHHHHHHHhcCCC----------------Cccc-c---c-ccccee-EEECCcccHHHHHHH
Confidence 346789999999999998876542 1111 1 1 123322 567899999998876
Q ss_pred -HHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhhccC--------
Q 010772 261 -MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVG-------- 331 (501)
Q Consensus 261 -~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tgv~-------- 331 (501)
++.+++.+..--.--.++-|..|. +++.|+-+...|+++++.+.||+.+ -|.+.+...=|+
T Consensus 212 alPL~ivtmasQnlpG~aVL~a~GY----~~p~~~~~~~tGl~s~l~ApfGg~~------~nlAaitaAIc~g~eah~dp 281 (378)
T PF03594_consen 212 ALPLFIVTMASQNLPGIAVLRAAGY----QPPVNPLITVTGLASLLAAPFGGHA------VNLAAITAAICAGPEAHPDP 281 (378)
T ss_pred HHHHHHHHHHhcchHHHHHHHHcCC----CCCchHHHHHHHHHHHHHhhhchhh------hHHHHHHHHHHcCCccCCCc
Confidence 788888887333333444454443 4568999999999999999999996 566555543222
Q ss_pred -chHH-HHHHHHHHHHHHHh-hHHHHHHHhCCHHHHHHH-HHHHHHHHH
Q 010772 332 -SRRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVG 376 (501)
Q Consensus 332 -SR~~-~~~ag~~lillg~~-pk~~~lia~IP~~V~ggv-li~~f~~i~ 376 (501)
.||. .+.+|++.+++|++ +.+..++...|.+.+..+ -+.+++.+.
T Consensus 282 ~rRy~Aav~~Gv~yll~Gl~a~~~v~l~~~lP~~li~~lAGLALlg~l~ 330 (378)
T PF03594_consen 282 SRRYIAAVAAGVFYLLFGLFAAALVALFAALPPALIAALAGLALLGTLG 330 (378)
T ss_pred ccchHHHHHHhHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH
Confidence 3665 58899999999999 688899999999988877 445566654
No 13
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=99.80 E-value=2.5e-17 Score=181.34 Aligned_cols=299 Identities=16% Similarity=0.163 Sum_probs=202.0
Q ss_pred hHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcc----c----------
Q 010772 34 WPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGT-RLPA----K---------- 98 (501)
Q Consensus 34 ~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~-rlPi----~---------- 98 (501)
+...++.|+.-.+..++-.+.+..+ .|+++. ..+.++.+..++-+++|. |.-+ +
T Consensus 14 l~~Di~aGltv~~~~iP~~~ayA~l----aglpp~-------~GLysa~~~~iv~alfGss~~~i~Gp~a~~sl~~~~~v 82 (563)
T TIGR00815 14 FKGDLMAGLTVGILLIPQAMAYAIL----AGLSPI-------YGLYTSFVPPFIYALFGTSRDIAIGPVAVMSLLLGSVI 82 (563)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHH----cCCCch-------hhhHHHHHHHHHhheecCCCcccCCHHHHHHHHHHHHH
Confidence 5788999998887666555544433 688884 567788888888888864 3322 0
Q ss_pred --cc-------ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhh------cCC--cc---
Q 010772 99 --FK-------RTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFG------FPG--VA--- 158 (501)
Q Consensus 99 --~~-------~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~------~~~--~~--- 158 (501)
+. ...+.+....+++|++++++|++|+ +++.+++|..|+..++..+|+.++... .+. -.
T Consensus 83 ~~~~~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~lrl-G~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~G~~~~~~~~~~ 161 (563)
T TIGR00815 83 ARVGLQYLFDCDAIRLAFTLTLLAGIFQVILGLLRL-GFLIEFLSHAVISGFMTGAAITIGLSQLKGLLGISIFNTRTDT 161 (563)
T ss_pred HHhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHhh-hHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCh
Confidence 00 1233455789999999999999998 999999997777777777777555332 221 00
Q ss_pred -------------c---hhhhHHHHHHHHHHHHHhhhhhhcccccc--cchhhHHHHHHHHHHHHHHHhhcCCCCCCCcc
Q 010772 159 -------------K---CVEIGLPQLVIIVFISQYLPHVIKRGKNI--FDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPK 220 (501)
Q Consensus 159 -------------~---~~~v~~~~l~l~i~l~~~~~~~~~~~~~~--l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~ 220 (501)
. |+....+.++.++ +....|++.++.++. ...+..|+.+++++++++.++.. .+
T Consensus 162 ~~~~~~~~~~l~~~~~~~~~~~~i~~~~~~-~l~~~~~~~~~~~~~~~~~~p~~li~vi~~~~~~~~~~~~-~~------ 233 (563)
T TIGR00815 162 LGVVISTWAGLPNTHNWNWCTLVIGLVLLL-FLLYTKKLGKRNKKLLFAPAVAPLLVVILATLAVTIGLHK-KQ------ 233 (563)
T ss_pred HHHHHHHHHHhhhccccchHHHHHHHHHHH-HHHHHHHhhhhccchhcccccHHHHHHHHHHHHHHHHccC-CC------
Confidence 0 2221112221111 112234332221111 22367889999998877766321 00
Q ss_pred cccccccCcCCccCCCCcccccccccccccccCHHH----HHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcce
Q 010772 221 TQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGE----AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGV 296 (501)
Q Consensus 221 ~~~~~~~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~----il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l 296 (501)
.+. .+++.|- .+| .+..|.+||.. +...+.+++++++|++...++.++..++ +.+.||++
T Consensus 234 -----~~~---~~g~ip~-g~p---~~~~~~~~~~~~~~l~~~a~~ia~v~~~e~l~~a~~~~~~~~~----~~d~n~El 297 (563)
T TIGR00815 234 -----GVS---ILGHIPS-GLS---FFPPITLDWELLPTLAPDAIAIAIVGLIESIAIARSFARMTGY----KIDANQEL 297 (563)
T ss_pred -----CeE---EEeecCC-CCC---CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----CCCCcHHH
Confidence 011 1111111 122 23345666644 4456889999999999999998887653 35689999
Q ss_pred ehhhhHHHHhhhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHH
Q 010772 297 GWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLF 371 (501)
Q Consensus 297 ~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~ 371 (501)
.++|++|+++|+||++|.+... .+..+...+|.++|.+.++++++++++.++ ++.++..+|.+++++++++.
T Consensus 298 ~a~G~~N~~~~~fg~~p~~~s~-srs~~~~~~G~~t~~a~i~~~~~~l~~~l~--~~~~l~~iP~~~la~ili~~ 369 (563)
T TIGR00815 298 VAQGIANIVGSFFSCYPATGSL-SRTAVNAKAGCRTQLSGVVTAIVVLLVLLV--LTPLFYYIPQAALAAIIISA 369 (563)
T ss_pred HHhhHHHHHHHHhCccCCCCcc-hHHHHHHhcCCcchHHHHHHHHHHHHHHHH--HHHHHHhChHHHHHHHHHHH
Confidence 9999999999999999999888 778888899999999999999988777665 67899999999999998874
No 14
>PRK11660 putative transporter; Provisional
Probab=99.79 E-value=2.2e-17 Score=181.80 Aligned_cols=309 Identities=14% Similarity=0.213 Sum_probs=199.5
Q ss_pred ChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcc----c---------
Q 010772 33 PWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGT-RLPA----K--------- 98 (501)
Q Consensus 33 p~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~-rlPi----~--------- 98 (501)
.+...+++|+.-.+..++..+.+..+ .|+++. ..+.++-+++++-+++|. |.-+ +
T Consensus 28 ~l~~D~iAGltv~~~~iPq~mayA~l----ag~pp~-------~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~ 96 (568)
T PRK11660 28 RFTRDLIAGITVGIIAIPLAMALAIA----SGVPPQ-------YGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPV 96 (568)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHH----cCCChH-------HHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHH
Confidence 36788999999888776666555533 688874 567888888999898863 3322 0
Q ss_pred -ccccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCc--------cc----------
Q 010772 99 -FKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGV--------AK---------- 159 (501)
Q Consensus 99 -~~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~--------~~---------- 159 (501)
...+++.+..+.+++|++++++|++|+ +++.+++|..|+..++.-+|+.+...+++.+ ..
T Consensus 97 ~~~~~~~~~~~~~~l~Gii~~l~gllrl-G~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~lG~~~~~~~~~~~~~l~~~~ 175 (568)
T PRK11660 97 SQQFGLAGLLVATLMSGIILILMGLARL-GRLIEYIPLSVTLGFTSGIGIVIATLQIKDFFGLQMAHVPEHYLEKVGALF 175 (568)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHhh-hHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccHHHHHHHHH
Confidence 123556677789999999999999997 8999999976666666666664433322111 00
Q ss_pred ------hh---hhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCccccccccc-Cc
Q 010772 160 ------CV---EIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRT-DR 229 (501)
Q Consensus 160 ------~~---~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~-d~ 229 (501)
+| .+++.++++++. .+++. .|.++.++++++++++++.++..+ ++.+..+....... |-
T Consensus 176 ~~l~~~~~~~~~~~~~~l~lll~----~~~~~------~~iP~~li~iiv~t~~~~~~~~~~-~~v~~vg~~~~~~~~~g 244 (568)
T PRK11660 176 QALPTINWGDALIGIVTLGVLIL----WPRLK------IRLPGHLPALLAGTAVMGVLNLLG-GHVATIGSRFHYVLADG 244 (568)
T ss_pred HhhccCCHHHHHHHHHHHHHHHH----HHhhc------ccCchHHHHHHHHHHHHHHHhccC-CCceeeccccccccccc
Confidence 12 233344433332 23321 245677999999999988876421 10000000000000 00
Q ss_pred C-C-cc-CCCCcccccccc-cc-ccc-ccCHHH----HHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehh
Q 010772 230 A-G-LI-DAAPWIRVPWPF-QW-GAP-SFDAGE----AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQ 299 (501)
Q Consensus 230 ~-~-~v-~~ap~~~~P~p~-~~-g~P-~f~~~~----il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~ad 299 (501)
. + .+ ...|-+.+|... .+ +.+ .+||+. +...+.++++..+|++.+..+.++..++ +.+.||++.++
T Consensus 245 ~~~~~ip~~~p~~~~p~~~~~~~~~~~~~~~~~~~~ll~~a~~iaiv~~iesl~~~~~~~~~~~~----~~d~n~EL~a~ 320 (568)
T PRK11660 245 SQGNGIPPLLPQFVLPWNLPGADGQPFTLSWDLIRALLPAAFSMAMLGAIESLLCAVVLDGMTGT----KHSANSELVGQ 320 (568)
T ss_pred ccccCCCCCCCCCCCCccccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC----CCCCcHHHHHH
Confidence 0 0 00 001112222100 00 000 246554 4456788899999999888888777653 34689999999
Q ss_pred hhHHHHhhhcCCCCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHH
Q 010772 300 GVGILLSGLFGTVNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLF 371 (501)
Q Consensus 300 Gl~~ilaglfG~~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~ 371 (501)
|++|+++|+||++|.+++. ....+...+|.++|.+.+++++++++.-++ +++++..||.+++++++++.
T Consensus 321 G~aNi~~~~fgg~p~~~s~-srSa~n~~aGarT~la~iv~a~~~ll~ll~--l~~ll~~iP~~vLa~ili~~ 389 (568)
T PRK11660 321 GLGNIVAPFFGGITATAAI-ARSAANVRAGATSPISAVIHALLVLLALLV--LAPLLSYLPLSAMAALLLMV 389 (568)
T ss_pred hHHHHHHHHhCcccccchH-HHHHHHHhcCCCcHHHHHHHHHHHHHHHHH--HHHHHHhCcHHHHHHHHHHH
Confidence 9999999999999999987 667788889999999998888877554332 56699999999999998864
No 15
>COG3135 BenE Uncharacterized protein involved in benzoate metabolism [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.79 E-value=1e-16 Score=161.00 Aligned_cols=298 Identities=21% Similarity=0.296 Sum_probs=220.6
Q ss_pred HHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--cc-------------
Q 010772 35 PEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA--KF------------- 99 (501)
Q Consensus 35 ~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi--~~------------- 99 (501)
.+++..|++.+++-+++..++-+-.+++.|.+++|++.++.+..+.+|+.|+.-++. +|+|+ +|
T Consensus 20 p~~l~ag~va~~vG~~~s~aii~~aa~a~gas~aq~aSwl~al~l~mGv~ti~Ls~~-yR~Pv~~aWSTPG~all~asl~ 98 (402)
T COG3135 20 PQTLLAGFVAVLVGYASSLAIIIQAAQAAGASPAQIASWLTALGLAMGVSTLTLSLR-YRVPVLTAWSTPGAALLVASLG 98 (402)
T ss_pred chhhhhhhHHheeccCccHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhh-hccceeeeecCccHHHHHhccC
Confidence 368899999999999888766655566799999999999999999999999999986 89999 33
Q ss_pred cccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCccchhhhHHHHHHHHHHHHHhhh
Q 010772 100 KRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVAKCVEIGLPQLVIIVFISQYLP 179 (501)
Q Consensus 100 ~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~~~~~v~~~~l~l~i~l~~~~~ 179 (501)
..++.++.|+.+++|++.++.|.+|.++|+.+.+||.+...++.-|=+...-.+++....++.+.+..++..++. |
T Consensus 99 g~s~~eaVGAfiVt~~li~l~G~~~~l~rl~~~IP~sla~AmlAGILL~F~l~a~~a~~~~p~l~lpmv~~~ll~----r 174 (402)
T COG3135 99 GLSFAEAVGAFIVTGALIILCGLTGPLTRLMRIIPPSLAAAMLAGILLRFGLKAFKALPTQPLLVLPMVLAYLLA----R 174 (402)
T ss_pred CCCHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhccCCChHHHHHHHHHHHHH----H
Confidence 247889999999999999999999999999999998876665433333333334444555666655555444333 3
Q ss_pred hhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCcccccccccccccccCHHHHHH
Q 010772 180 HVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIRVPWPFQWGAPSFDAGEAFA 259 (501)
Q Consensus 180 ~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~~~P~p~~~g~P~f~~~~il~ 259 (501)
. +-.+++++..+++|.+++...|... + ....+..+.| .|-.|+||+.+++.
T Consensus 175 ~-------f~pr~aV~aalvvgv~va~~~G~~~---~----------------~~~~~~~~~p---~~v~P~Fs~~A~l~ 225 (402)
T COG3135 175 V-------FAPRYAVIAALVVGVLVAALLGDLH---T----------------ALVALEISTP---TWVTPEFSFAAMLS 225 (402)
T ss_pred H-------cCchHHHHHHHHHHHHHHHHhCccc---c----------------cccccccCcc---eeeCCcccHHHHHH
Confidence 3 2358999999999999998887431 0 1112233444 57789999999887
Q ss_pred H-HHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhhccCc------
Q 010772 260 M-MMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTRVGS------ 332 (501)
Q Consensus 260 ~-~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tgv~S------ 332 (501)
. ++.+++.+..--..-.++-|..|. +++.+--+.+.|+.+++++.||+.. -|.+.+...-|.+
T Consensus 226 lalPL~lvtmasQN~pGiAvLka~gY----~pp~~pl~~~TGl~sll~ApfG~~t------~nLaAItAAic~gpdaHpD 295 (402)
T COG3135 226 LALPLFLVTMASQNLPGIAVLKAAGY----QPPPSPLIVATGLASLLSAPFGGHT------VNLAAITAAICTGPDAHPD 295 (402)
T ss_pred HhHHHHHHHHHhccCccceeehhcCC----CCCCchHHHHhHHHHHHhcccccce------ecHHHHHHHHhcCCCCCCC
Confidence 5 688998887333333444454443 3456778899999999999999984 5666665544443
Q ss_pred ---hHH-HHHHHHHHHHHHHh-hHHHHHHHhCCHHHHHHH-HHHHHHHHH
Q 010772 333 ---RRV-VQISAGFMIFFSVL-GKFGAVFASIPAPIVAAL-YCLFFAYVG 376 (501)
Q Consensus 333 ---R~~-~~~ag~~lillg~~-pk~~~lia~IP~~V~ggv-li~~f~~i~ 376 (501)
||. ..++|++-+++|+| +.+.+++...|.+.+..+ -+.+.+.+.
T Consensus 296 ~~rry~Aa~~agi~ylv~GlF~~~~~~l~~alP~~li~~lAGLALlg~~~ 345 (402)
T COG3135 296 PARRYTAALVAGIFYLLAGLFGGALVGLMAALPASLIAALAGLALLGTLG 345 (402)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHH
Confidence 444 68889999999999 789999999999988766 334445544
No 16
>PF00916 Sulfate_transp: Sulfate transporter family; InterPro: IPR011547 A number of proteins involved in the transport of sulphate across a membrane as well as some yet uncharacterised proteins have been shown [, ] to be evolutionary related. These proteins are: Neurospora crassa sulphate permease II (gene cys-14). Yeast sulphate permeases (genes SUL1 and SUL2). Rat sulphate anion transporter 1 (SAT-1). Mammalian DTDST, a probable sulphate transporter which, in human, is involved in the genetic disease, diastrophic dysplasia (DTD). Sulphate transporters 1, 2 and 3 from the legume Stylosanthes hamata. Human pendrin (gene PDS), which is involved in a number of hearing loss genetic diseases. Human protein DRA (Down-Regulated in Adenoma). Soybean early nodulin 70. Escherichia coli hypothetical protein ychM. Caenorhabditis elegans hypothetical protein F41D9.5. These proteins are highly hydrophobic and seem to contain about 12 transmembrane domains.; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.55 E-value=1.2e-14 Score=146.15 Aligned_cols=238 Identities=19% Similarity=0.213 Sum_probs=153.7
Q ss_pred HHhhhhHHHHHHhcCcchHHHHHHHHHHHhhHhhcCCcc-----------------------c--hh---hhHHHHHHHH
Q 010772 120 LGFSGLWRNVTRFLSPLSVVPLISLVGFGLYEFGFPGVA-----------------------K--CV---EIGLPQLVII 171 (501)
Q Consensus 120 lg~~gl~~~l~~~fpp~V~G~~v~lIGlsl~~~~~~~~~-----------------------~--~~---~v~~~~l~l~ 171 (501)
+|++|+ +++.+++|..|+..++..+|+.++..+++.+. . ++ .++..++++.
T Consensus 1 lGllrl-G~l~~~ip~pVi~Gf~~g~ai~I~~~Ql~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 79 (280)
T PF00916_consen 1 LGLLRL-GFLVRFIPRPVISGFLAGIAILIIFSQLPNLLGIPVVPSHEGLFSFIRALFQLISTITNWPTLAIGLVALVFL 79 (280)
T ss_pred Cccccc-cHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccchhhhhhhhhhhccchhhhhhhhHHHHHH
Confidence 366786 99999999877777777777765544332110 0 11 1122222222
Q ss_pred HHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCc-CCccCCCCccccccccccccc
Q 010772 172 VFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDR-AGLIDAAPWIRVPWPFQWGAP 250 (501)
Q Consensus 172 i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~-~~~v~~ap~~~~P~p~~~g~P 250 (501)
. +.++.++. +..+...+.+..++.+++++++++.+.... + .++. ...-...|.+.+|. .
T Consensus 80 ~-~~~~~~~~-~~~~~~~~~p~~li~vv~~~~~~~~~~~~~-~-----------~v~~~~~i~~~lp~~~~p~-~----- 139 (280)
T PF00916_consen 80 L-IIRLLPKR-LPSRFWPPIPAPLIVVVLGTLLSWLFLLDK-Y-----------GVAIVGEIPSGLPPPSLPS-F----- 139 (280)
T ss_pred h-hhhhhhhh-ccccccccccccceeeehhhhhhhhhhhcc-c-----------cccccccccccCccccCcc-c-----
Confidence 1 21222210 011223445678888999888887764310 0 0111 11112234444442 0
Q ss_pred ccCHH----HHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHH
Q 010772 251 SFDAG----EAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLA 326 (501)
Q Consensus 251 ~f~~~----~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~ 326 (501)
.++|. .+...+.+++++.+|++.+.++.++..++ +.+.||+++++|++|+++|+||++|.+... .+..+..
T Consensus 140 ~~~~~~~~~~~~~a~~ia~v~~~~s~~~~~~~~~~~~~----~~d~n~El~a~G~aNi~s~~~gg~p~~~s~-srs~~~~ 214 (280)
T PF00916_consen 140 DISWSLILDLLPTALAIAIVGFIESLLIAKSIAKKTGY----RIDPNQELIALGLANIVSGLFGGMPGSGSF-SRSAVNY 214 (280)
T ss_pred ccccccccccchhHHHHHHHHHHHHHHhhhhhcccccc----cCCcHHHHHHhhhccccchhhccccccccc-ccchHHH
Confidence 33333 34556789999999999998888776543 347899999999999999999999999998 7888888
Q ss_pred hhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHHHHHhhhccceee
Q 010772 327 LTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL-FFAYVGAGGLSFLQF 385 (501)
Q Consensus 327 ~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~-~f~~i~~~Gi~~l~~ 385 (501)
.+|.+||.+.++++++++++-++ +..++..+|.+++++++++ .+.++-...++.+.+
T Consensus 215 ~~Ga~t~~s~~~~~~~~l~~l~~--~~~~l~~iP~~~La~ili~~~~~l~~~~~~~~~~~ 272 (280)
T PF00916_consen 215 RAGARTRLSGLISALFVLLVLLF--LAPLLAYIPKAVLAAILIVVGISLIDWSSLRRLWR 272 (280)
T ss_pred hcCcceeehhHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHhc
Confidence 99999999999998887665443 5679999999999999886 445444444444433
No 17
>KOG0236 consensus Sulfate/bicarbonate/oxalate exchanger SAT-1 and related transporters (SLC26 family) [Inorganic ion transport and metabolism]
Probab=99.37 E-value=1.1e-10 Score=130.67 Aligned_cols=288 Identities=17% Similarity=0.189 Sum_probs=185.4
Q ss_pred eehhhHHhhhh--cCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--------cc-------------------ccc
Q 010772 52 TVLIPTSLVPQ--MGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA--------KF-------------------KRT 102 (501)
Q Consensus 52 ~i~~Plil~~a--~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi--------~~-------------------~~~ 102 (501)
++.+|--++-+ +|+++ ...+..+-++.++-.+||.--.+ +. ...
T Consensus 92 ~l~VPQ~iaYa~la~lpp-------iyGLYssf~~~~iY~~fGtsr~isiG~~av~sLmv~~~v~~~v~~~~~~~~~~~~ 164 (665)
T KOG0236|consen 92 SLSVPQGLAYALLAGLPP-------IYGLYSSFFPPLIYAIFGTSRHVSIGPFAVVSLMVGTVVSQVVLSEAPSNDIATT 164 (665)
T ss_pred eeecchHHHHHHHcCCCh-------HHHHHHHHHHHHHheeccCCCcccccHHHHHHHHHHHHHHHHHhccCCCcCcchh
Confidence 44555544433 56666 36777888888888888865554 00 134
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCc-chHHHHHHHHHH----HhhHh--hcCCccc----------------
Q 010772 103 MRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSP-LSVVPLISLVGF----GLYEF--GFPGVAK---------------- 159 (501)
Q Consensus 103 ~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp-~V~G~~v~lIGl----sl~~~--~~~~~~~---------------- 159 (501)
.+.+....+++|++|+++|++|+ +.+.+++|. ++.|.+ ...++ +..+. |+++...
T Consensus 165 i~va~~lt~l~Giiq~~mG~lrL-Gfl~~~lS~~~l~GFt-~gaa~~I~~sQlk~llGi~~~~~~~~~~~~~~~~~~~~~ 242 (665)
T KOG0236|consen 165 IQVATTLTFLTGIIQLILGLLRL-GFLVRFLSEPALSGFT-TGAALHIVTSQLKVLLGITSFPRHSGPGSIVFIVFDLLA 242 (665)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc-ChHHHHccHHHHhHhh-hhhhhhhhHHhhHhhccccccCCCCCceeEEEeeHHhhh
Confidence 56677889999999999999998 999999995 555543 33344 33322 2221110
Q ss_pred -------hhhhHHHHHHHHHHHHH-hhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCC
Q 010772 160 -------CVEIGLPQLVIIVFISQ-YLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAG 231 (501)
Q Consensus 160 -------~~~v~~~~l~l~i~l~~-~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~ 231 (501)
.+.+++..+.+. .+.+ +-++..+ .-.+.....-++.+++++++++.+.....+.. ..++ .
T Consensus 243 ~~~~~~~~~~~~l~~l~~L-~~~k~~~~~~~~-k~~~v~~~~~li~vIi~T~~~~~~~~~~~~~~--------~~~~--~ 310 (665)
T KOG0236|consen 243 NLPKTLATLVLSLIFLVVL-LLTKELNPKFKK-KLFSVPIPFELIVVIIGTLISYIFRLEGRYGP--------IIVG--E 310 (665)
T ss_pred cccccchhhhhHHHHHHHH-HHHHHhhhhhcc-cceeecccHHHHHHHHHHHHHHHhccccccCC--------eeec--c
Confidence 122333333222 2333 2222111 11123455689999999999988865321100 0111 0
Q ss_pred ccCCCCcccccccccccccccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCC
Q 010772 232 LIDAAPWIRVPWPFQWGAPSFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGT 311 (501)
Q Consensus 232 ~v~~ap~~~~P~p~~~g~P~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~ 311 (501)
.-...|...+|. +.+....+..++.++++++.|+++--++.++..+. +-+-||+++|-|++|+++++|++
T Consensus 311 i~~g~~~~~lp~------~~~~~~~~~~~~~i~iva~~~~iai~k~fa~~~~y----~vd~nqELiAlG~~Ni~sSff~~ 380 (665)
T KOG0236|consen 311 IPRGFPPPSLPP------LSLTPQVIPDAFAIAIVALLEHIAIGKSFASLHGY----KVDSNQELIALGISNILSSFFGC 380 (665)
T ss_pred CCCCCCCCCCCC------hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC----eeCCChHHHHHHHHHHhhhhhce
Confidence 112222333331 12223446668999999999999877777766543 34678999999999999999999
Q ss_pred CCCcccccchhhHHHhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHH
Q 010772 312 VNGTSVSVENAGLLALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL-FFA 373 (501)
Q Consensus 312 ~p~tt~s~~n~g~i~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~-~f~ 373 (501)
+|.|... .+..+...+|+.++.+.++.+++.++.-+ .++.++..+|.++++++.+. +.+
T Consensus 381 ~p~tgs~-sRSav~~~sG~~T~~s~i~~~~~vl~~l~--~l~p~f~~iP~~vLaaIIi~a~~~ 440 (665)
T KOG0236|consen 381 YPTTGSF-SRSAVNIKSGGRTQVAGIVSAALVLLALL--FLGPLFYYIPKCVLAAIIISALIG 440 (665)
T ss_pred Ecccchh-hHHHHHhhcCCcchHHHHHHHHHHHHHHH--HHHHHhhhhhHHHHHHHHHHHhhH
Confidence 9999999 99999999999999997766665544333 36789999999999999775 444
No 18
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=98.19 E-value=0.00066 Score=77.94 Aligned_cols=294 Identities=15% Similarity=0.186 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcc----------ccc---------ccHHH---HHHHHHHHHHHHHHHHhhhhHHHHHH
Q 010772 74 IQTLLFVAGLNTLLQSLFGTRLPA----------KFK---------RTMRA---IQGSLIVASTLQIVLGFSGLWRNVTR 131 (501)
Q Consensus 74 i~~~ll~sGi~Tllq~~~G~rlPi----------~~~---------~~~~~---~~Ga~ivaGli~~llg~~gl~~~l~~ 131 (501)
++=++++++++.+++++++ .-|+ .|. .++.+ ..=..+.++++.++++.+.. ..+.|
T Consensus 403 v~E~Llstai~Giifslf~-GQPL~IlG~TGPilvF~~~ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~-s~lvr 480 (900)
T TIGR00834 403 VSELLISTAVQGVLFALLA-AQPLLVVGFSGPLLVFEEAFFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEG-SFLVR 480 (900)
T ss_pred HHHHHHHHHHHHHHHhhhc-CCceEEecCcccHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhH-HHHHH
Confidence 5677889999999999984 5665 111 11111 11124566677778877765 67788
Q ss_pred hcCcchHHHHHHHHHHHhhHhhcCCc---------------------------------------c------ch---hhh
Q 010772 132 FLSPLSVVPLISLVGFGLYEFGFPGV---------------------------------------A------KC---VEI 163 (501)
Q Consensus 132 ~fpp~V~G~~v~lIGlsl~~~~~~~~---------------------------------------~------~~---~~v 163 (501)
+++.-.-=.+-++|.+.-+..+++.+ + .+ ...
T Consensus 481 yiTRFTeEiFa~lIs~IFI~eai~~L~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 560 (900)
T TIGR00834 481 YISRFTQEIFSFLISLIFIYETFSKLIKIFQEHPLQVFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNT 560 (900)
T ss_pred HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccccccccccccccccccccccccccccccccccccccchH
Confidence 88764433333344443222221100 0 00 122
Q ss_pred HHHHH---HHHHHHHHhhhhhhc--c----cccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccC-cCCcc
Q 010772 164 GLPQL---VIIVFISQYLPHVIK--R----GKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTD-RAGLI 233 (501)
Q Consensus 164 ~~~~l---~l~i~l~~~~~~~~~--~----~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d-~~~~v 233 (501)
++..+ +.++.+..+++++.. + .++.+.=+++.+++++.+.+.+.++.. +.+.. .+-+ |...-
T Consensus 561 ~llsliL~lgTf~~a~~L~~fk~s~yf~~~vR~~isDfgv~iaI~~~t~v~~~~~~v--~~~kl------~Vp~~f~pt~ 632 (900)
T TIGR00834 561 ALLSLVLMLGTFFLAMFLRKFKNSRYFPGKARRLIGDFGVPISILIMVLVDIFIGDT--YTQKL------SVPSGLKVTN 632 (900)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCcCCchhhhhhhhhhHHHHHHHHHHHHHHhccC--ccccc------CCCCCcCCCC
Confidence 23322 223444555555431 1 233445578999999988888876521 10000 0001 11100
Q ss_pred -CCCCcccccccccccc----cccC-HHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhh
Q 010772 234 -DAAPWIRVPWPFQWGA----PSFD-AGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSG 307 (501)
Q Consensus 234 -~~ap~~~~P~p~~~g~----P~f~-~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilag 307 (501)
..-.|+--| |+. |.+. +.++++.+.+++.-++|+-=+..-+++- +.+.++....+=.++.-|+-+.++|
T Consensus 633 p~~R~W~i~p----~~~~~~~p~w~~~~A~iPAlll~ILiFmD~nIts~iv~~~-e~kLkKgsgyH~Dllllg~~~~v~s 707 (900)
T TIGR00834 633 PSARGWFIPP----LGENRPFPWWMMFAAALPALLVFILIFMEQQITTLIVSKK-ERKLKKGSGFHLDLLLVVGMGGVAA 707 (900)
T ss_pred CCCCCeEEcc----ccccccccHHHHHHHHHHHHHHHHHHHHHhhhHHHHhcCc-cccCCCCcccchHHHHHHHHHHHHH
Confidence 113455222 221 2221 3456677778888888765433333321 2223334556778899999999999
Q ss_pred hcCCCCCcccccchhhHHHh----------------hccCc-hHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH
Q 010772 308 LFGTVNGTSVSVENAGLLAL----------------TRVGS-RRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL 370 (501)
Q Consensus 308 lfG~~p~tt~s~~n~g~i~~----------------Tgv~S-R~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~ 370 (501)
++|-...++...++.-.+.+ .+|.. |......++ |+.++++ ..+++..||.+|+.|+.+|
T Consensus 708 llGLPw~~aatv~S~~Hv~sL~v~~~~~~~Ge~~~i~~V~EQRvT~ll~~l-Liglsv~--~~PvL~~IP~aVL~GvFlY 784 (900)
T TIGR00834 708 LFGLPWLSAATVRSVTHANALTVMSKASAPGEKAQIQEVREQRVTGLLVAV-LVGLSIL--MEPILKRIPLAVLFGIFLY 784 (900)
T ss_pred hcCCCcccccCCcChhhHhHHeeeeeccCCCCCCccceeEeeehHHHHHHH-HHHHHHH--HHHHHhhccHHHHHHHHHH
Confidence 99988766653333322221 12332 555555554 3333322 4558999999999999999
Q ss_pred HHHHHHhhhccceeec
Q 010772 371 FFAYVGAGGLSFLQFC 386 (501)
Q Consensus 371 ~f~~i~~~Gi~~l~~v 386 (501)
| |.-...|.|+..++
T Consensus 785 M-Gv~SL~GnQ~~~Ri 799 (900)
T TIGR00834 785 M-GVTSLSGIQLFDRL 799 (900)
T ss_pred H-HHhhcccCHHHHHH
Confidence 7 88888888876543
No 19
>KOG1172 consensus Na+-independent Cl/HCO3 exchanger AE1 and related transporters (SLC4 family) [Inorganic ion transport and metabolism]
Probab=98.03 E-value=0.001 Score=75.05 Aligned_cols=322 Identities=14% Similarity=0.133 Sum_probs=174.1
Q ss_pred HHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc----------cc---------cccH
Q 010772 43 QHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA----------KF---------KRTM 103 (501)
Q Consensus 43 Qh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi----------~~---------~~~~ 103 (501)
--.+.++.+++.+.+-.+..++-. .+-..=++=+++.+.++.++.+++| .-|+ .| ..++
T Consensus 364 a~~lfiYfa~l~P~ItFG~ll~~~-Tdg~~~v~E~L~stal~Giifslfg-gQPLlIlg~TgP~lVfe~~lf~f~~~~~~ 441 (876)
T KOG1172|consen 364 AATLFIYFACLLPAITFGGLLGEA-TDGLIGVVETLLSTALCGIIFSLFG-GQPLLILGVTGPLLVFEKALFKFCKDNGL 441 (876)
T ss_pred hHHHHHHHHhhhhHhhHHHHhhhh-ccchHHHHHHHHHHHHHHHHHHHhc-CCceEEEecCccHHHHHHHHHHHHhhCCC
Confidence 344555555544443333322211 1223446778999999999999986 5555 01 1222
Q ss_pred HHHH---HHHHHHHHHHHHHHhhhhHHHHHHhcCc---chHHHHHHHHHHHhhHhhcC----------------------
Q 010772 104 RAIQ---GSLIVASTLQIVLGFSGLWRNVTRFLSP---LSVVPLISLVGFGLYEFGFP---------------------- 155 (501)
Q Consensus 104 ~~~~---Ga~ivaGli~~llg~~gl~~~l~~~fpp---~V~G~~v~lIGlsl~~~~~~---------------------- 155 (501)
.++. =-.+.+.++.++++.+.. ..+.++|+. ..-+..|.+|=+ ..+++
T Consensus 442 dyl~~r~wVglW~~~l~illaa~~a-s~lv~~~TRfteEiF~~LIs~iFi---~eai~kl~~i~~~~~~~~~~~~~~~~~ 517 (876)
T KOG1172|consen 442 DYLAFRAWVGLWTAFLLILLAATNA-SSLVKYITRFTEEIFGLLISLIFI---YEAIKKLIKIFKGLPIEFDSKPNPGAD 517 (876)
T ss_pred chhhHHHHHHHHHHHHHHHHHHhhh-hHHHHHHHHhHHHHHHHHHHHHHH---HHHHHHHHHHhhcCcccccccCCcccc
Confidence 2221 124566677777777765 677777765 455554444332 21111
Q ss_pred ---Ccc---------c--hhhhHH---HHHHHHHHHHHhhhhhhc--cc----ccccchhhHHHHHHHHHHHHHHHhhcC
Q 010772 156 ---GVA---------K--CVEIGL---PQLVIIVFISQYLPHVIK--RG----KNIFDRFAVIFSVVIVWIYAHLLTVGG 212 (501)
Q Consensus 156 ---~~~---------~--~~~v~~---~~l~l~i~l~~~~~~~~~--~~----~~~l~~~aiLigi~vG~i~a~~~g~~g 212 (501)
... . ....++ +..+.++.++.++|++.+ ++ +.+++=+++.+.+++-+.+.+..+..
T Consensus 518 ~~~~~~~~~~~~~~~~~~~p~~~llslil~~gt~~~a~~lr~fr~s~yf~~~~R~~isDfgvpisIl~~s~i~~~~~~~- 596 (876)
T KOG1172|consen 518 WSGPECESVSGTLLGSSCRPDTALLSLILMFGTLFLALTLRKFKSSRYFPRKVRSLISDFGVPLSILVFSLIDYFGGSV- 596 (876)
T ss_pred cccccccccCcccCCCcCCcchHHHHHHHHHHHHHHHHHHHHhccCCccchHHHHHHHhhhhHHHHHHHHHHHhhcccc-
Confidence 000 0 022233 333334455566666542 22 33444478999999988888776531
Q ss_pred CCCCCCcccccccccCcCCccCC-CCccccccccccccccc-CHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCc
Q 010772 213 AYNDAAPKTQASCRTDRAGLIDA-APWIRVPWPFQWGAPSF-DAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPS 290 (501)
Q Consensus 213 ~~~~~~~~~~~~~~~d~~~~v~~-ap~~~~P~p~~~g~P~f-~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~ 290 (501)
++++-+ .+..+...... -.|+-.|.- ..|-. -..++++.+.+++.-++|+-=+..-+++. +.+..+..
T Consensus 597 -~~~kl~-----vp~~~~~t~~~~rgw~v~~~~---~~P~~~~~~A~ipalll~iLiFmDqqIts~iv~rk-e~kLKKgs 666 (876)
T KOG1172|consen 597 -ETPKLP-----VPSVFPPTWPFDRGWFVPPFG---KNPWWYVFAALIPALLLTILIFMDQQITAVIVNRK-ENKLKKGS 666 (876)
T ss_pred -CCCccc-----cCcCCCCCCcccCCeeeCCCC---CCCHHHHHHHHHHHHHHHHHHHhcchHHHHHhhcc-cccCCCCc
Confidence 111100 00011110111 245433310 11211 12445666777777777654332222222 22333445
Q ss_pred CCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhhc----------------cCc-hHHHHHHHHHHHHHHHhhHHH
Q 010772 291 VLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALTR----------------VGS-RRVVQISAGFMIFFSVLGKFG 353 (501)
Q Consensus 291 ~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~Tg----------------v~S-R~~~~~ag~~lillg~~pk~~ 353 (501)
..+=.++--|+-+.++|++|=...++...++.--+..=. |.. |......+++.. +. -...
T Consensus 667 gyH~DLlllgil~~icsllGLPw~~~a~p~S~~H~~SL~v~~~~~apge~~~i~~V~EQRvtgll~~llvg-ls--~~~~ 743 (876)
T KOG1172|consen 667 GYHLDLLLLGILTLICSLLGLPWSNAATVQSPMHTKSLAVESETSAPGEQPQIVGVREQRVTGLLQFLLVG-LS--VLLL 743 (876)
T ss_pred chhHHHHHHHHHHHHHHhcCCCccccccccCHHHHHHHHHhhcccCCCCccccccchhhhhHHHHHHHHHH-HH--HHHH
Confidence 667789999999999999999887777656665444322 222 444555555443 22 2356
Q ss_pred HHHHhCCHHHHHHHHHHHHHHHHhhhccceee
Q 010772 354 AVFASIPAPIVAALYCLFFAYVGAGGLSFLQF 385 (501)
Q Consensus 354 ~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~ 385 (501)
+++..||.+|+.|+.+|| |.=...|.|...+
T Consensus 744 pvL~~IP~~VL~GvFlYM-gv~SL~Gnqf~eR 774 (876)
T KOG1172|consen 744 PVLKLIPMPVLYGVFLYM-GVSSLPGNQFFER 774 (876)
T ss_pred HHHhhccHHHHHHHHHHH-hhccCCccHHHHH
Confidence 689999999999999997 7667777776543
No 20
>PF11840 DUF3360: Protein of unknown function (DUF3360); InterPro: IPR021794 This family of proteins are functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 489 to 517 amino acids in length.
Probab=97.54 E-value=0.016 Score=59.87 Aligned_cols=257 Identities=12% Similarity=0.093 Sum_probs=141.4
Q ss_pred ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHHHHHHHHH----hhHhhcCCcc--chhhhHHHHHHHHHHH
Q 010772 101 RTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPLISLVGFG----LYEFGFPGVA--KCVEIGLPQLVIIVFI 174 (501)
Q Consensus 101 ~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~v~lIGls----l~~~~~~~~~--~~~~v~~~~l~l~i~l 174 (501)
.+.+.++| ++-|++-++++++|--+|+.++=..-|.|..+..+|+. .+..-..+.. +...++++.+++.+++
T Consensus 141 GgHPLalg--ilvg~fGlil~~~kggS~L~~LTs~gv~ggLllylG~~G~~~qi~kl~~wa~~~~~~~i~fvvi~~tiv~ 218 (492)
T PF11840_consen 141 GGHPLALG--ILVGVFGLILSIFKGGSKLVNLTSHGVCGGLLLYLGFVGLIGQIKKLFAWANGFDMGYIAFVVIIVTIVL 218 (492)
T ss_pred CCCcHHHH--HHHHHHHHHHHHhcchhHHHhhhcCccccceeeeehhhhHHHHHHHHHHHHhccCccHHHHHHHHHHHHH
Confidence 44555555 44578889999998878999988888888766555652 2222111111 1334666666666666
Q ss_pred HHhhhhhhcccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCCCCccc------cccccccc
Q 010772 175 SQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDAAPWIR------VPWPFQWG 248 (501)
Q Consensus 175 ~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~ap~~~------~P~p~~~g 248 (501)
-.|+.++. | |..++-++-+++-++++.+|.. .||.. -...|-++ =-.-++.|
T Consensus 219 Ya~L~k~~---K---rWLaIPl~~~~a~~~a~~lGa~---------------f~f~t-~pglp~lnP~YWWge~tGw~Lg 276 (492)
T PF11840_consen 219 YAYLAKIE---K---RWLAIPLCSILAGVLAFALGAP---------------FEFTT-EPGLPNLNPMYWWGEETGWQLG 276 (492)
T ss_pred HHHHHHhc---c---chhhhhHHHHHHHHHHHHcCCC---------------ceeec-CCCCCCCCCcccccCCcccccC
Confidence 56665542 2 3556667777777777777752 12210 00111111 01112456
Q ss_pred ccccC-HHHHHHHHHHHHH-HHHHhHhHHHHHHhHhcCCCCC--CcCCCcceehhhhHHHHhhhcCCCCCcccccchhhH
Q 010772 249 APSFD-AGEAFAMMMASFV-ALVESTGAFFAVARYASATPMP--PSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGL 324 (501)
Q Consensus 249 ~P~f~-~~~il~~~~i~lv-~~~esig~~~a~~~~~~~~~~~--~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~ 324 (501)
+|.++ .-+.+++.+.+.. =.-|.+|+ +..++.+-.+..+ .-+++..+..-.+=+++++.+|+-..+++- ..--+
T Consensus 277 lP~~~hfiav~PFAiLAVaMWSpDflgh-rvFqelnypk~~~kvlMnvDDTm~~~siRQ~vGs~lGGgN~~SsW-gTymI 354 (492)
T PF11840_consen 277 LPTLEHFIAVLPFAILAVAMWSPDFLGH-RVFQELNYPKETKKVLMNVDDTMTMCSIRQIVGSILGGGNIASSW-GTYMI 354 (492)
T ss_pred CCcHHHHHHhccHHHHHHHHhCchHHHH-HHHHHhcCchhhcceeecccchhHHHHHHHHHhhcccCCcccccc-hhhhh
Confidence 77543 2233343332222 22366775 4455554211111 135788999999999999999997554443 21111
Q ss_pred H-HhhccCchHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHH-HHHHHHhhhccceee
Q 010772 325 L-ALTRVGSRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCL-FFAYVGAGGLSFLQF 385 (501)
Q Consensus 325 i-~~Tgv~SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~-~f~~i~~~Gi~~l~~ 385 (501)
- +..+.-=+--.+..|+++++.+++.-=.. ..+=.||+--++++ +|--+.-+|+|+.++
T Consensus 355 PaaIaKRPIpggAiLtg~~Ci~~av~GyPMd--lavw~Pvl~vALlvGVflPLleAGmqm~r~ 415 (492)
T PF11840_consen 355 PAAIAKRPIPGGAILTGLLCIVAAVWGYPMD--LAVWPPVLRVALLVGVFLPLLEAGMQMTRK 415 (492)
T ss_pred hHHHhcCCCCchHHHHHHHHHHHHHhcCcch--hhhcccHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 1 12222223334677788887777631111 12224666666665 667777889988764
No 21
>PF00955 HCO3_cotransp: HCO3- transporter family Only partial structure; InterPro: IPR011531 Bicarbonate (HCO3 -) transport mechanisms are the principal regulators of pH in animal cells. Such transport also plays a vital role in acid-base movements in the stomach, pancreas, intestine, kidney, reproductive organs and the central nervous system. Functional studies have suggested four different HCO3 - transport modes. Anion exchanger proteins exchange HCO3 - for Cl- in a reversible, electroneutral manner []. Na+/HCO3 - co-transport proteins mediate the coupled movement of Na+ and HCO3 - across plasma membranes, often in an electrogenic manner []. Na- driven Cl-/HCO3 - exchange and K+/HCO3 - exchange activities have also been detected in certain cell types, although the molecular identities of the proteins responsible remain to be determined. Sequence analysis of the two families of HCO3 - transporters that have been cloned to date (the anion exchangers and Na+/HCO3 - co-transporters) reveals that they are homologous. This is not entirely unexpected, given that they both transport HCO3 - and are inhibited by a class of pharmacological agents called disulphonic stilbenes []. They share around ~25-30% sequence identity, which is distributed along their entire sequence length, and have similar predicted membrane topologies, suggesting they have ~10 transmembrane (TM) domains. This domain is found at the C terminus of many bicarbonate transport proteins. It is also found in some plant proteins responsible for boron transport []. In these proteins it covers almost the entire length of the sequence.; GO: 0006820 anion transport, 0016021 integral to membrane; PDB: 1BH7_A 1BTT_A 1BZK_A 1BTQ_A 1BTR_A 1BNX_A 1BTS_A.
Probab=93.26 E-value=0.023 Score=62.13 Aligned_cols=201 Identities=13% Similarity=0.145 Sum_probs=2.2
Q ss_pred HHHHHHhhhhhhc------ccccccchhhHHHHHHHHHHHHHHHhhcCCCCCCCcccccccccCcCCccCC-CCcccccc
Q 010772 171 IVFISQYLPHVIK------RGKNIFDRFAVIFSVVIVWIYAHLLTVGGAYNDAAPKTQASCRTDRAGLIDA-APWIRVPW 243 (501)
Q Consensus 171 ~i~l~~~~~~~~~------~~~~~l~~~aiLigi~vG~i~a~~~g~~g~~~~~~~~~~~~~~~d~~~~v~~-ap~~~~P~ 243 (501)
++.+..+++++.+ ..|+.+.=+++.|++++-+.+...++. . .+ +... ..++.....+ -.|+--|.
T Consensus 256 Tf~la~~L~~fk~S~yf~~~vR~~isDf~v~iaI~~~~~~~~~~~~-~-~~-kL~v-----p~~f~pt~~~~r~W~v~p~ 327 (510)
T PF00955_consen 256 TFWLAYTLRQFKNSPYFPRWVREIISDFGVPIAILIMTLVDYLFGV-D-TP-KLNV-----PSSFKPTSPGKRGWFVNPF 327 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcCCcCccHHHHHhHHhhHHHHHHHHHHHHHHHhcc-c-cc-ccCC-----CCCCCCCCCCCCCeecCcc
Confidence 3444555555432 234455557899999988888766552 1 00 0000 0012211111 34653331
Q ss_pred cccccccccC-HHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchh
Q 010772 244 PFQWGAPSFD-AGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENA 322 (501)
Q Consensus 244 p~~~g~P~f~-~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~ 322 (501)
...|.+. ..++++.+.+++.-++|.-=+..-+++. +.+.++....+=.++.-|+-+.++|++|-...++...++.
T Consensus 328 ---~~~p~w~~~aA~~palll~iL~F~DqnIts~ivn~~-e~kLkKg~gyH~DL~llgi~~~v~sllGLPw~~aa~~~S~ 403 (510)
T PF00955_consen 328 ---GSLPWWAIFAAIIPALLLTILFFMDQNITSLIVNRP-ENKLKKGSGYHLDLFLLGIITLVCSLLGLPWMNAATPQSP 403 (510)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---cCCCHHHHHHHHHHHHHHHHHHHHHHhHhHHHhCCh-hhccCCCCcccHHHHHHHHHHHHHHHcCCCCcccCccCCH
Confidence 1123222 2445556667777777643222222221 2233344556778899999999999999877666432333
Q ss_pred hHHH----------------hhccCc-hHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceee
Q 010772 323 GLLA----------------LTRVGS-RRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQF 385 (501)
Q Consensus 323 g~i~----------------~Tgv~S-R~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~ 385 (501)
-.+. ..+++. |......++ |+ |+..-+..++..||.||+.|+.+++ |.-...|.|+..+
T Consensus 404 ~Hv~sL~~~~~~~~pGe~~~i~~V~EqRvT~l~~~~-Li--gls~~l~pvL~~IP~~VL~GvFlym-G~~sL~gnq~~~R 479 (510)
T PF00955_consen 404 MHVRSLAVESETSAPGEKPKIVGVREQRVTGLLVHL-LI--GLSLFLLPVLKLIPMPVLYGVFLYM-GVTSLSGNQFFER 479 (510)
T ss_dssp -----------------------------------------------------------------------------TTT
T ss_pred HHhCcccEEeccccCCCCCeeCeEEEecccHHHHHH-HH--HHHHHHHHHHHHhhHHHHHHHHHhh-eeeeecCccHHHH
Confidence 2221 122332 444455444 33 3344466789999999999999997 7777777776655
Q ss_pred cc
Q 010772 386 CN 387 (501)
Q Consensus 386 v~ 387 (501)
+.
T Consensus 480 i~ 481 (510)
T PF00955_consen 480 IL 481 (510)
T ss_dssp T-
T ss_pred HH
Confidence 44
No 22
>COG0659 SUL1 Sulfate permease and related transporters (MFS superfamily) [Inorganic ion transport and metabolism]
Probab=84.58 E-value=15 Score=41.01 Aligned_cols=121 Identities=17% Similarity=0.180 Sum_probs=84.1
Q ss_pred HHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhh--HHHhhccC--
Q 010772 256 EAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAG--LLALTRVG-- 331 (501)
Q Consensus 256 ~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g--~i~~Tgv~-- 331 (501)
-++.-+.++++.+=|+++- +..++-+ ...|+.+.=++.++.++||+.+..... ...+ ++..+-++
T Consensus 24 Dl~AGltva~valP~ama~----a~~aGv~------p~~GLyas~i~~~v~alfGgs~~~i~G-Pt~a~~~v~a~~i~~~ 92 (554)
T COG0659 24 DLLAGLTVAAVALPLAMAF----AIAAGVP------PEAGLYASIVAGIIYALFGGSRGLISG-PTGAFAVVLAAVIASL 92 (554)
T ss_pred HHHHHHHHHHHHhHHHHHH----HHHcCCC------HHHHHHHHHHHHHHHHHHcCCccceec-cchhhHHHHHHHHHHH
Confidence 4566678888888888874 3344432 247999999999999999999876443 2222 11122222
Q ss_pred -------chHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccC
Q 010772 332 -------SRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNL 388 (501)
Q Consensus 332 -------SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~ 388 (501)
.-.....+|++.+++|++ |++.++..||.||+-|.+-=..-.|+...+..+...+.
T Consensus 93 ~~~g~~~~~~~tllaGv~~i~~G~l-RLG~li~fip~pVl~Gf~~Giai~I~~~Ql~~~~G~~~ 155 (554)
T COG0659 93 VETGLALAFLATLLAGVFQILLGLL-RLGRLIRFIPRPVLIGFTAGIAILIILTQLPVLLGLAS 155 (554)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HhhhhhhhccHHHHHHHHHHHHHHHHHHHHHHHcCCCc
Confidence 123357889999999987 89999999999999998776555566666666555444
No 23
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=83.93 E-value=9.9 Score=42.38 Aligned_cols=116 Identities=15% Similarity=0.188 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhh-------c
Q 010772 257 AFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALT-------R 329 (501)
Q Consensus 257 il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~T-------g 329 (501)
++.-+.++++.+-|+++- +...+-++ .-|+.+--+..++.++||+.+.......+. ...++ +
T Consensus 18 i~aGltv~~~~iP~~~ay----A~laglpp------~~GLysa~~~~iv~alfGss~~~i~Gp~a~-~sl~~~~~v~~~~ 86 (563)
T TIGR00815 18 LMAGLTVGILLIPQAMAY----AILAGLSP------IYGLYTSFVPPFIYALFGTSRDIAIGPVAV-MSLLLGSVIARVG 86 (563)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHcCCCc------hhhhHHHHHHHHHhheecCCCcccCCHHHH-HHHHHHHHHHHhc
Confidence 556677888888888874 33445332 358999999999999999998777653332 21111 1
Q ss_pred cCch----------HHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhcccee
Q 010772 330 VGSR----------RVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQ 384 (501)
Q Consensus 330 v~SR----------~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~ 384 (501)
.... .....+|++++++|++ +++.+...+|.||+.|.+.-+.-.++.+-++.+.
T Consensus 87 ~~~~~~~~~~~~a~~l~~l~Gi~~~~~g~l-rlG~l~~~is~~Vi~Gf~~g~a~~i~~~Ql~~~~ 150 (563)
T TIGR00815 87 LQYLFDCDAIRLAFTLTLLAGIFQVILGLL-RLGFLIEFLSHAVISGFMTGAAITIGLSQLKGLL 150 (563)
T ss_pred CCCCcccHHHHHHHHHHHHHHHHHHHHHHH-hhhHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1111 4568899999999987 7999999999999999887665666655555443
No 24
>TIGR00843 benE benzoate transporter. The benzoate transporter family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter.
Probab=81.40 E-value=24 Score=37.66 Aligned_cols=125 Identities=11% Similarity=0.132 Sum_probs=80.3
Q ss_pred hhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc--------------cccccHHHHHHHHHHHHHHHHHHHhh-h
Q 010772 60 VPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA--------------KFKRTMRAIQGSLIVASTLQIVLGFS-G 124 (501)
Q Consensus 60 ~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi--------------~~~~~~~~~~Ga~ivaGli~~llg~~-g 124 (501)
.++.|-+.. +...+...|++|++-+.|| ..++ ++ +....=.++.+.+|++++++|++ +
T Consensus 247 l~aaGy~~p-----~~~~~~~tGl~sll~ApfG-g~~~nlaaitaAic~G~~ah-~d~~rR~~a~i~~Gv~yll~glfag 319 (395)
T TIGR00843 247 LKAAGYNAP-----AKPIIAAAGLAALFAAFAG-GISIGIAAITAAICMGKDAH-EDKDKRWIAAAAAGIFYLLAGLFAG 319 (395)
T ss_pred HHHcCCCCC-----chHHHHHHHHHHHHHhccC-CchhhhhHHhHHHhcCcccc-cCcCccchHHHHHHHHHHHHHHHHH
Confidence 344554443 3677889999999999997 4443 11 11334567889999999999988 7
Q ss_pred hHHHHHHhcCcchHHHHHHHHHHHhhHh-------hcCCccchhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHH
Q 010772 125 LWRNVTRFLSPLSVVPLISLVGFGLYEF-------GFPGVAKCVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFS 197 (501)
Q Consensus 125 l~~~l~~~fpp~V~G~~v~lIGlsl~~~-------~~~~~~~~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLig 197 (501)
.+..+...+|+..+... -|+-+... ++++ .++..-++++++++. .++ .++...+-++|
T Consensus 320 ~i~~l~~~~P~~li~~l---aGlAll~~~~~~l~~a~~~-~~~r~~a~~tflvta------Sg~-----~~~gigaafWg 384 (395)
T TIGR00843 320 AITALFAALPKELIAAL---AGLALLGAIAGNIKIALHE-DQERDAALIAFLATA------SGL-----HFLGIGSAFWG 384 (395)
T ss_pred HHHHHHHHCCHHHHHHH---HHHHHHHHHHHHHHHHhcC-cchhHHHHHHHHHHH------hcC-----CcccccHHHHH
Confidence 77888999999877654 34444332 2211 122334445544432 332 24668899999
Q ss_pred HHHHHHHHH
Q 010772 198 VVIVWIYAH 206 (501)
Q Consensus 198 i~vG~i~a~ 206 (501)
+++|.+..+
T Consensus 385 l~~G~~~~~ 393 (395)
T TIGR00843 385 LCAGGLAYF 393 (395)
T ss_pred HHHHHHHHH
Confidence 999977654
No 25
>PRK11660 putative transporter; Provisional
Probab=75.27 E-value=25 Score=39.32 Aligned_cols=118 Identities=13% Similarity=0.110 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHHhh------
Q 010772 255 GEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLALT------ 328 (501)
Q Consensus 255 ~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~T------ 328 (501)
.-++.-+.++++.+-|+++- +..++.++ .-|+.+--+++++.++||+.+......++.......
T Consensus 31 ~D~iAGltv~~~~iPq~may----A~lag~pp------~~GLysa~~~~~vyal~Gss~~~~~Gp~a~~~~~~~~~~~~~ 100 (568)
T PRK11660 31 RDLIAGITVGIIAIPLAMAL----AIASGVPP------QYGLYTAAVAGIVIALTGGSRFSVSGPTAAFVVILYPVSQQF 100 (568)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHcCCCh------HHHHHHHHHHHHHHHHhcCCCCcccChhHHHHHHHHHHHHHh
Confidence 34566778888888888874 34555432 238999999999999999998877653332111111
Q ss_pred ccC-chHHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccce
Q 010772 329 RVG-SRRVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFL 383 (501)
Q Consensus 329 gv~-SR~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l 383 (501)
+.. .-.....+|++.+++|++ +++.+...||.||+.|.+.-+.-.++.+.++.+
T Consensus 101 ~~~~~~~~~~l~Gii~~l~gll-rlG~l~~fip~pVi~Gf~~g~al~I~~~Ql~~~ 155 (568)
T PRK11660 101 GLAGLLVATLMSGIILILMGLA-RLGRLIEYIPLSVTLGFTSGIGIVIATLQIKDF 155 (568)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-hhhHHHhcCcHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111 112357889999999987 699999999999999987754334444444433
No 26
>TIGR00801 ncs2 uracil-xanthine permease. NCS2 family appears to be distantly related to the NCS1 family (TC #2.A.39).
Probab=62.79 E-value=58 Score=34.86 Aligned_cols=66 Identities=23% Similarity=0.336 Sum_probs=49.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-ccc--------ccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHH
Q 010772 74 IQTLLFVAGLNTLLQSLFGTRLPA-KFK--------RTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 141 (501)
Q Consensus 74 i~~~ll~sGi~Tllq~~~G~rlPi-~~~--------~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~ 141 (501)
++..+++-|++|++-+++| ..|. +|. .+...-. +...+|++.+++++++-+..+...+|..|.|..
T Consensus 271 ~~r~l~adGl~~i~aglfG-~~p~t~~sen~g~~~~T~~~sr~-~~~~~a~~~i~~~l~pk~~~l~~~iP~~vlgg~ 345 (415)
T TIGR00801 271 LHRGVLADGLATLLAGLFG-GFPNTTFAQNIGVIALTRVASRW-VIVGAAVILIALGFFPKIAALITSIPSPVLGGA 345 (415)
T ss_pred ccchHHHhhHHHHHHHhcC-CCCCcchhhhheeeeecCCCchH-HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 4688999999999999998 5887 221 1212222 567888889999988667899999997777654
No 27
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=61.64 E-value=1.2e+02 Score=33.63 Aligned_cols=68 Identities=24% Similarity=0.312 Sum_probs=39.3
Q ss_pred CCCChHHHHHHHHHHHHHhhceeehhhHHhhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc
Q 010772 30 SPPPWPEAILLGFQHYIVMLGTTVLIPTSLVPQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA 97 (501)
Q Consensus 30 d~pp~~~~~~~GlQh~l~m~~~~i~~Plil~~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi 97 (501)
.+|+.+..+..+.-..+...+.....|++..+.+|.++.....+.++.-+.+-+++++...+..|++.
T Consensus 216 ~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~ 283 (524)
T PF05977_consen 216 SSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSS 283 (524)
T ss_pred cchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCc
Confidence 34555555554444444333333446888777788888777666655555555666666555444443
No 28
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=60.23 E-value=77 Score=33.71 Aligned_cols=67 Identities=16% Similarity=0.242 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-ccccc--HHHH-----HHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHH
Q 010772 74 IQTLLFVAGLNTLLQSLFGTRLPA-KFKRT--MRAI-----QGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 141 (501)
Q Consensus 74 i~~~ll~sGi~Tllq~~~G~rlPi-~~~~~--~~~~-----~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~ 141 (501)
++..+.+-|++|++=+++| ..|. +|.+. .-+. .-..+++|++.+++++++.+..+...+|..|.|.+
T Consensus 255 ~~~~l~~~Gi~~i~aglfG-~~p~t~~~~~~~~~~~tg~~sr~~~~~~~~~lil~~l~~~~~~l~~~iP~~vlgg~ 329 (406)
T TIGR03173 255 LAGGLRADGLGSALGGLFN-TFPYTSFSQNVGLVQLTGVKSRYVVAAAGVILVLLGLFPKLAALVASIPQPVLGGA 329 (406)
T ss_pred ccchHHhccHHHHHHHHhC-CCCCcchhhhHHHHHHhCCCchHhHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 5688899999999999998 5777 33221 1111 11247888999999988767999999998777764
No 29
>PRK11412 putative uracil/xanthine transporter; Provisional
Probab=59.16 E-value=84 Score=34.00 Aligned_cols=68 Identities=12% Similarity=0.162 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCcc-cccccHH--H-----HHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHH
Q 010772 73 VIQTLLFVAGLNTLLQSLFGTRLPA-KFKRTMR--A-----IQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 141 (501)
Q Consensus 73 li~~~ll~sGi~Tllq~~~G~rlPi-~~~~~~~--~-----~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~ 141 (501)
-+..++.+-|++|++-+++| -.|. +|.+.-. . --=.+..+|++.+++|+++-+..+..-+|..|.|.+
T Consensus 276 ~l~rgi~~dGi~s~laglfg-~~p~tt~sqNvGvi~~TgV~SR~v~~~aa~ilillgl~PK~~alia~IP~pVlGg~ 351 (433)
T PRK11412 276 RYRRSFVATGFMTLITVPLA-VIPFSPFVSSIGLLTQTGDYRRRSFIYGSVMCLLVALIPALTRLFCSIPLPVSSAV 351 (433)
T ss_pred ccccchhhccHHHHHHHhcC-CCCCCchhhhhhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 45789999999999999997 6666 3321111 0 112356778889999998778888999997777664
No 30
>PF00860 Xan_ur_permease: Permease family; InterPro: IPR006043 This entry represents a susbset of the wider APC (Amino acid-Polyamine-organoCation) superfamily of transporters []. Characterised proteins in this entry include: Xanthine permease PbuX, involved in cellualar xanthine transport [] Uric acid permeases which promotes uptake of uric acid into the cell in limiting-nitrogen conditions [] Uracil permease [] Sodium-dependent vitamin C transporter, a sodium/ascorbate cotransporter mediating electrogenic uptake of Vitamin C [] These proteins generally contain 12 transmembrane regions. Many members of this family are uncharacterised and may transport other substrates eg. RutG is likely to transport pyrimidines into the cell [].; GO: 0005215 transporter activity, 0006810 transport, 0055085 transmembrane transport, 0016020 membrane; PDB: 3QE7_A.
Probab=46.67 E-value=1.6e+02 Score=31.05 Aligned_cols=85 Identities=25% Similarity=0.378 Sum_probs=52.3
Q ss_pred hhcCCChHHHHHHHHHHHHHHHHHHHHHHHhCCCCcc-cccccHH---HH----HHHHHHHHHHHHHHHhhhhHHHHHHh
Q 010772 61 PQMGGGNEEKAKVIQTLLFVAGLNTLLQSLFGTRLPA-KFKRTMR---AI----QGSLIVASTLQIVLGFSGLWRNVTRF 132 (501)
Q Consensus 61 ~a~gl~~~~~~~li~~~ll~sGi~Tllq~~~G~rlPi-~~~~~~~---~~----~Ga~ivaGli~~llg~~gl~~~l~~~ 132 (501)
+..|.+.++ ..-++.++.+-|++|++-+++|. .|. +|.+.-. .- -=..+.++++.+++++...+..+...
T Consensus 257 ~~~~~~~~~-~~~~~r~l~~dg~~~~l~gl~G~-~~~t~~~en~g~i~~t~v~Sr~~~~~a~~~~i~~~~~p~~~~l~~~ 334 (389)
T PF00860_consen 257 RIAGKDDPR-PPRIRRGLLADGLGTILAGLFGT-SPTTTYSENAGGIAATGVASRRVGLTAGVILILFGLSPKFAPLFAS 334 (389)
T ss_dssp HHHTS-TCC-CCCHHHHHHHHHHHHHHHHHHT----EEE-HHHHHHHHHHTB--HHHHHHHHHHHHHHT--HHHHHHHTT
T ss_pred HHhCCCCcc-chhhcccceeeeeeeeechhhcC-CCCccccccchhhhhhccccceeeeHHHHHHHHHhhHHHHHHHHHH
Confidence 334544332 23367999999999999999986 776 4432211 11 22467778888999988777888999
Q ss_pred cCcch-HHHHHHHHHH
Q 010772 133 LSPLS-VVPLISLVGF 147 (501)
Q Consensus 133 fpp~V-~G~~v~lIGl 147 (501)
+|..| .|..+.+.|.
T Consensus 335 IP~~v~gg~~lv~~g~ 350 (389)
T PF00860_consen 335 IPSPVIGGPLLVLFGM 350 (389)
T ss_dssp S-HHHHHHHHHHHHHH
T ss_pred HHHHHhccchHHHHHH
Confidence 99777 5565656665
No 31
>PRK10720 uracil transporter; Provisional
Probab=45.55 E-value=2.3e+02 Score=30.50 Aligned_cols=67 Identities=16% Similarity=0.312 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-cccccHH-----HH--HHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHH
Q 010772 74 IQTLLFVAGLNTLLQSLFGTRLPA-KFKRTMR-----AI--QGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 141 (501)
Q Consensus 74 i~~~ll~sGi~Tllq~~~G~rlPi-~~~~~~~-----~~--~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~ 141 (501)
++..+++-|++|++=+++| ..|. +|.+.-+ -+ --....+|++.+++++++-+..+...+|..|.|.+
T Consensus 262 ~~r~l~adGlatii~glfG-~~p~tty~en~g~ia~T~v~sr~v~~~a~~~li~lg~~pk~~a~ia~iP~pVlgg~ 336 (428)
T PRK10720 262 LHRSMFANGLSTVISGFFG-STPNTTYGENIGVMAITRVYSTWVIGGAAIIAILLSCVGKLAAAIQAIPLPVMGGV 336 (428)
T ss_pred ccchHhhhhHHHHHHHhcC-CCCccccccccceeeecccchhHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 4789999999999999997 5677 3322110 01 11235578888999988777888999997777665
No 32
>PF03594 BenE: Benzoate membrane transport protein; InterPro: IPR004711 The benzoate:H+ symporter (BenE) family contains only a single characterised member, the benzoate transporter of Acinetobacter calcoaceticus, which functions as a benzoate/proton symporter [, ]. Proteins in this family are about 400 residues in length and probably span the membrane 12 times. They exhibit about 30% identity to each other and limited sequence similarity to members of the aromatic acid:H+symporter (AAHS) family of the major facilitator superfamily (MFS). However the degree of similarity with the latter proteins is insufficient to establish homology. Thus, in spite of the sequence similarity and their similar substrate specificities, the BenE family must be considered separately. This family is classified as TC number 2.A.46 under the transporter classification (TC) system [].; GO: 0016021 integral to membrane
Probab=44.38 E-value=53 Score=34.82 Aligned_cols=114 Identities=19% Similarity=0.266 Sum_probs=69.7
Q ss_pred cCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCc----ceehhhhHHHHhhhcCCCCCcccccchhhHHHh
Q 010772 252 FDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSR----GVGWQGVGILLSGLFGTVNGTSVSVENAGLLAL 327 (501)
Q Consensus 252 f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r----~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~~ 327 (501)
|+++.+..-++..++...-+..-+....+..+.. +++... -.++.|+.++.-++.==+|..+.- +.-|..-.
T Consensus 3 ~~~s~~~aG~va~lvg~tg~~aiv~qaa~a~g~s---~~q~~SWl~al~~~~Gl~~i~lSl~yR~Pi~~AW-StPGaAlL 78 (378)
T PF03594_consen 3 FSLSAVSAGFVAVLVGYTGPVAIVLQAAQAAGAS---PAQIASWLFALYLGMGLTSILLSLRYRMPIVTAW-STPGAALL 78 (378)
T ss_pred CcHHHHHHHHHHHHhhccchHHHHHHHHHHcCCC---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCchhhc-chHHHHHH
Confidence 4556666666666666666666655555554432 222332 334566666666665556655554 33333222
Q ss_pred hccCch-------HHHHHHHHHHHHHHHhhHHHHHHHhCCHHHHHHHHH
Q 010772 328 TRVGSR-------RVVQISAGFMIFFSVLGKFGAVFASIPAPIVAALYC 369 (501)
Q Consensus 328 Tgv~SR-------~~~~~ag~~lillg~~pk~~~lia~IP~~V~ggvli 369 (501)
.....+ =+++.+++++++.|+.+.+..++..||.++..+++-
T Consensus 79 ~~~~~~~~~~eavGAfl~~~~Li~l~G~tg~~~rl~~~IP~~ia~AMLA 127 (378)
T PF03594_consen 79 ATSLPGYSFAEAVGAFLVAGALILLLGVTGLFGRLMRRIPPPIASAMLA 127 (378)
T ss_pred HHhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 111111 125788999999999999999999999998877743
No 33
>COG4129 Predicted membrane protein [Function unknown]
Probab=37.48 E-value=3.5e+02 Score=28.26 Aligned_cols=62 Identities=23% Similarity=0.386 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCcc----------------cccccHHHHHHHHHHHHHHHHHHHhhhhHHHHHHhcCcchHH
Q 010772 76 TLLFVAGLNTLLQSLFGTRLPA----------------KFKRTMRAIQGSLIVASTLQIVLGFSGLWRNVTRFLSPLSVV 139 (501)
Q Consensus 76 ~~ll~sGi~Tllq~~~G~rlPi----------------~~~~~~~~~~Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G 139 (501)
-|-++.+++.++-.++|+..|. +...+++-+.|.++-+++-.+++.++| ..|+..|
T Consensus 15 Kt~ia~~La~~ia~~l~~~~~~~A~i~AV~~l~~t~~~s~~~~~~r~~g~~iG~~~a~l~~~l~g--------~~~~~~~ 86 (332)
T COG4129 15 KTGLAAGLALLIAHLLGLPQPAFAGISAVLCLSPTIKRSLKRALQRLLGNALGAILAVLFFLLFG--------QNPIAFG 86 (332)
T ss_pred HHHHHHHHHHHHHHHhCCCchHHHHHHHhhcccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHcC--------ccHHHHH
Confidence 4445777777775577877776 112356666666655554444444433 2566677
Q ss_pred HHHHHH
Q 010772 140 PLISLV 145 (501)
Q Consensus 140 ~~v~lI 145 (501)
.+++++
T Consensus 87 v~~~i~ 92 (332)
T COG4129 87 VVLLII 92 (332)
T ss_pred HHHHHH
Confidence 665443
No 34
>TIGR00834 ae anion exchange protein. They preferentially catalyze anion exchange (antiport) reactions, typically acting as HCO3-:Cl- antiporters, but also transporting a range of other inorganic and organic anions. Additionally, renal Na+:HCO3- cotransporters have been found to be members of the AE family. They catalyze the reabsorption of HCO3- in the renal proximal tubule.
Probab=35.39 E-value=5.1e+02 Score=30.91 Aligned_cols=188 Identities=13% Similarity=0.081 Sum_probs=111.4
Q ss_pred ccCHHHHHHHHHHHHHHHHHhHhHHHHHHhHhcCCCCCCcCCCcceehhhhHHHHhhhcCCCCCcccccchhhHHH--h-
Q 010772 251 SFDAGEAFAMMMASFVALVESTGAFFAVARYASATPMPPSVLSRGVGWQGVGILLSGLFGTVNGTSVSVENAGLLA--L- 327 (501)
Q Consensus 251 ~f~~~~il~~~~i~lv~~~esig~~~a~~~~~~~~~~~~~~i~r~l~adGl~~ilaglfG~~p~tt~s~~n~g~i~--~- 327 (501)
.|+...+-+.+.++++++.-.+.=-.-+++.++. .-..+..+++++++.++=++||+-|-+=.. .+|=+. .
T Consensus 366 a~~~q~laa~ifiyFA~L~PaIaFG~ll~~~T~g----~~gv~E~Llstai~Giifslf~GQPL~IlG--~TGPilvF~~ 439 (900)
T TIGR00834 366 ALNPQCLAAVIFIYFAALSPAITFGGLLGEKTRN----MMGVSELLISTAVQGVLFALLAAQPLLVVG--FSGPLLVFEE 439 (900)
T ss_pred hhcchhHHHHHHHHHHHhhHHhhHHHHHHHhhCC----cchHHHHHHHHHHHHHHHhhhcCCceEEec--CcccHHHHHH
Confidence 3666777777888888887766533333343332 235678999999999999999998754322 222111 1
Q ss_pred -----hccC-------chHHHHHHHHHHHHHHHhh--HHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceee----ccC-
Q 010772 328 -----TRVG-------SRRVVQISAGFMIFFSVLG--KFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQF----CNL- 388 (501)
Q Consensus 328 -----Tgv~-------SR~~~~~ag~~lillg~~p--k~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~----v~~- 388 (501)
.+.. --|+++++++++++++.+- .+...++--...+.+...-+.|-. -+++.+.+ -+.
T Consensus 440 ~ly~~c~~~~~~yl~~~~WigiW~~~~~~lla~~~~s~lvryiTRFTeEiFa~lIs~IFI~---eai~~L~~~f~~~~~~ 516 (900)
T TIGR00834 440 AFFSFCESNGLEYLVGRVWIGLWLVLLVLLLVATEGSFLVRYISRFTQEIFSFLISLIFIY---ETFSKLIKIFQEHPLQ 516 (900)
T ss_pred HHHHHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhHHHHHHHHHHHHHHH---HHHHHHHHHHhcCCcc
Confidence 1100 1467788888888887764 455566667777776654444332 23332211 110
Q ss_pred ---C-----------------------------------CccceeeehhHHHhhcch-hhhhhhhhhhcCCCCccccccc
Q 010772 389 ---N-----------------------------------SFRVKFILGFSIFIGLSV-PQYFNEYTAINGFGPVHTSGRW 429 (501)
Q Consensus 389 ---~-----------------------------------~~rn~~ivg~sl~~Gl~~-p~~~~~~~~~~~~~p~~~~~~~ 429 (501)
+ ...|....++.+.+|.-. ..++.++- -+..
T Consensus 517 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~llsliL~lgTf~~a~~L~~fk----------~s~y 586 (900)
T TIGR00834 517 VFYNTLFCVPPKPQGPSVSALLEKDCSKLGGTLGGNNCRFQPNTALLSLVLMLGTFFLAMFLRKFK----------NSRY 586 (900)
T ss_pred cccccccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHhC----------CCCc
Confidence 0 002344455555555532 33333320 1124
Q ss_pred ccccccccccc-chhHHHHHHHHHHhhcC
Q 010772 430 FNDMVNVPFSS-EPFVAGCVAFFLDNTLH 457 (501)
Q Consensus 430 lp~~~~~~l~s-gi~~g~l~ai~Ln~l~~ 457 (501)
+|.++|.++++ |+.++.++...++..++
T Consensus 587 f~~~vR~~isDfgv~iaI~~~t~v~~~~~ 615 (900)
T TIGR00834 587 FPGKARRLIGDFGVPISILIMVLVDIFIG 615 (900)
T ss_pred CCchhhhhhhhhhHHHHHHHHHHHHHHhc
Confidence 78899999977 88888888888888765
No 35
>TIGR00822 EII-Sor PTS system, mannose/fructose/sorbose family, IIC component. Bacterial PTS transporters transport and concomitantly phosphorylate their sugar substrates, and typically consist of multiple subunits or protein domains. The Man (PTS splinter group) family is unique in several respects among PTS permease families. It is the only PTS family in which members possess a IID protein. It is the only PTS family in which the IIB constituent is phosphorylated on a histidyl rather than a cysteyl residue. Its permease members exhibit broad specificity for a range of sugars, rather than being specific for just one or a few sugars. The mannose permease of E. coli, for example, can transport and phosphorylate glucose, mannose, fructose, glucosamine,N-acetylglucosamine, and other sugars. Other members of this family can transport sorbose, fructose and N-acetylglucosamine. This family is specific for the sorbose-specific IIC subunits of this family of PTS transporters.
Probab=29.37 E-value=1.2e+02 Score=30.71 Aligned_cols=40 Identities=13% Similarity=0.119 Sum_probs=33.3
Q ss_pred hhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCC
Q 010772 349 LGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLN 389 (501)
Q Consensus 349 ~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~ 389 (501)
-+.+.+++..||..++.|.-+.- +++=..|+-++.+.-++
T Consensus 163 ~~~v~~il~~iP~~v~~Gl~vag-gmLPAvGfAmLl~~m~~ 202 (265)
T TIGR00822 163 QSAVQAMLKAIPEVVTHGLQIAG-GIIVVVGYAMVLRMMFK 202 (265)
T ss_pred HHHHHHHHHHCHHHHHHHHHHHH-hhHHHHHHHHHHHHHhh
Confidence 36788999999999999987765 88888999888776664
No 36
>KOG2662 consensus Magnesium transporters: CorA family [Inorganic ion transport and metabolism]
Probab=28.92 E-value=2.1e+02 Score=30.66 Aligned_cols=63 Identities=17% Similarity=0.416 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCccccc---ccHHHHHHH-HHHHHHHHHHHHhhhhHHHHHHhcC
Q 010772 69 EKAKVIQTLLFVAGLNTLLQSLFGTRLPAKFK---RTMRAIQGS-LIVASTLQIVLGFSGLWRNVTRFLS 134 (501)
Q Consensus 69 ~~~~li~~~ll~sGi~Tllq~~~G~rlPi~~~---~~~~~~~Ga-~ivaGli~~llg~~gl~~~l~~~fp 134 (501)
+...++++.-|+.++++++-+.||.++|..+. +.+..+.+. ...+++++..+ .+ +.|.+|+++
T Consensus 347 qleL~Lt~gT~~~s~~~~va~ifGMNl~~~l~~~~~~F~~vv~~~~~~~~~lf~~i--~~-~~k~krL~~ 413 (414)
T KOG2662|consen 347 QLELLLTIGTFCLSVFSVVAGIFGMNLPSSLEEDHYAFKWVVGITFTLCIVLFVVI--LG-YAKLKRLLG 413 (414)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCccchhccCCChhhhhHHHHHHHHHHHHHHH--HH-HHHHhhhcC
Confidence 33456778888999999999999999999321 233333333 33355554432 12 356666543
No 37
>TIGR03616 RutG pyrimidine utilization transport protein G. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the uracil-xanthine permease family defined by TIGR00801. As well as the The Nucleobase:Cation Symporter-2 (NCS2) Family (TC 2.A.40).
Probab=26.87 E-value=4.9e+02 Score=28.01 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=48.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCcc-cccc-----cHHHHH--HHHHHHHHHHHHHHhhhhHHHHHHhcCcchHHHH
Q 010772 74 IQTLLFVAGLNTLLQSLFGTRLPA-KFKR-----TMRAIQ--GSLIVASTLQIVLGFSGLWRNVTRFLSPLSVVPL 141 (501)
Q Consensus 74 i~~~ll~sGi~Tllq~~~G~rlPi-~~~~-----~~~~~~--Ga~ivaGli~~llg~~gl~~~l~~~fpp~V~G~~ 141 (501)
++..+.+-|++|++=+++| -.|. .|.+ ..--+. .....++++.+++++++-++.+...+|..|.|.+
T Consensus 282 i~r~l~adGl~t~~agl~g-~~p~tt~~en~g~i~~T~v~SR~v~~~a~~~lillgl~Pk~~al~~~IP~pVlgG~ 356 (429)
T TIGR03616 282 MGRAFVGDGLATMLSGSVG-GTGVTTYAENIGVMAVTKVYSTLVFVAAAVFAILLGFSPKFGALIHTIPVAVLGGA 356 (429)
T ss_pred hccchhhhhHHHHHHHhcC-CCCCcceeeeeeeeeecCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 6799999999999999986 5565 2321 011111 3456778889999998777889999997776654
No 38
>PF04172 LrgB: LrgB-like family ; InterPro: IPR007300 The two products of the lrgAB operon are potential membrane proteins, and LrgA and LrgB are both thought to control murein hydrolase activity and penicillin tolerance [].
Probab=26.77 E-value=1.5e+02 Score=28.92 Aligned_cols=79 Identities=13% Similarity=0.206 Sum_probs=39.8
Q ss_pred hhHHHHHH-hcCcchHHHHHHHHHHHhhHhhcCCc--cc---hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHH
Q 010772 124 GLWRNVTR-FLSPLSVVPLISLVGFGLYEFGFPGV--AK---CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFS 197 (501)
Q Consensus 124 gl~~~l~~-~fpp~V~G~~v~lIGlsl~~~~~~~~--~~---~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLig 197 (501)
++.+|.++ ++.|+++...+...-+.+...-.++. ++ ++.++-.++.+.+=+-+..+.+++ +..+++.+
T Consensus 10 ~l~~r~~~~~l~P~l~a~~~ii~~L~~~~i~y~~Y~~gg~~l~~lLgPatVALAvPLY~~~~~l~~------~~~~il~~ 83 (215)
T PF04172_consen 10 WLYKRFKSPFLNPLLIAIVLIIAFLLLTGIPYEDYMQGGDILSFLLGPATVALAVPLYRQRRLLKK------NWIPILVG 83 (215)
T ss_pred HHHHHcCCCcccHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHH
Confidence 34566655 45788887765554444444332221 12 334555555554444222222211 23467777
Q ss_pred HHHHHHHHHHH
Q 010772 198 VVIVWIYAHLL 208 (501)
Q Consensus 198 i~vG~i~a~~~ 208 (501)
+.+|.+++.+.
T Consensus 84 ~~~g~~~~~~~ 94 (215)
T PF04172_consen 84 VLVGSLVSIFS 94 (215)
T ss_pred HHHHHHHHHHH
Confidence 77777765544
No 39
>PF13142 DUF3960: Domain of unknown function (DUF3960)
Probab=26.49 E-value=37 Score=27.68 Aligned_cols=43 Identities=16% Similarity=0.187 Sum_probs=29.5
Q ss_pred HHHhhcCCCCccchhhccccccccccccCCCCC-------CCccccCCcc
Q 010772 451 FLDNTLHKKDGQVRKDRGRHWWDKFWSFKGDTR-------SEEFYSLPFN 493 (501)
Q Consensus 451 ~Ln~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 493 (501)
+..++.|-+++.+.|||.+..|+|-+-+++++- .++.|.+|..
T Consensus 24 l~~llvp~~pkg~~KerTIl~w~~KefyKeenli~~i~Ygm~~~~~lp~y 73 (87)
T PF13142_consen 24 LFSLLVPCEPKGEDKERTILMWKEKEFYKEENLIPFILYGMKKGYQLPQY 73 (87)
T ss_pred HHHHhcCCCCCCCCceeEEeeechhhHHhhhccceeEEeeccccccCccc
Confidence 456788888888899999999988544444422 3344666654
No 40
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=25.07 E-value=6.2e+02 Score=24.27 Aligned_cols=30 Identities=10% Similarity=0.113 Sum_probs=20.1
Q ss_pred HHHHHHhcCcc-------hHHHHHHHHHHHhhHhhcC
Q 010772 126 WRNVTRFLSPL-------SVVPLISLVGFGLYEFGFP 155 (501)
Q Consensus 126 ~~~l~~~fpp~-------V~G~~v~lIGlsl~~~~~~ 155 (501)
-+++.|.+.+. ++|..++.||+.++-.|+.
T Consensus 164 a~~i~~~lG~~g~~vi~Ri~Glil~aiavq~i~~Gl~ 200 (203)
T PF01914_consen 164 ADKIMRRLGKTGLQVITRIMGLILAAIAVQMILSGLR 200 (203)
T ss_pred hHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47777877764 4677777777776655543
No 41
>PRK04288 antiholin-like protein LrgB; Provisional
Probab=22.37 E-value=4.5e+02 Score=26.02 Aligned_cols=70 Identities=10% Similarity=0.167 Sum_probs=33.8
Q ss_pred cCcchHHHHHHHHHHHhhHhhcCC--ccc---hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHH
Q 010772 133 LSPLSVVPLISLVGFGLYEFGFPG--VAK---CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHL 207 (501)
Q Consensus 133 fpp~V~G~~v~lIGlsl~~~~~~~--~~~---~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~ 207 (501)
+.|+++...+...-+.+...-.+. -++ ++.++-.++++.+=+-+..+.+++ ...++++|+.+|.+++..
T Consensus 36 lnPll~s~~~ii~~L~~~~i~Y~~Y~~g~~~l~~lLgPAtVALAvPLY~q~~~lk~------~~~~Il~~~~vG~~~~i~ 109 (232)
T PRK04288 36 FTPLFVAMVLGIAFLKLTGISYEEYNIGGDIISFFLEPATIAFAIPLYKKRDVLKK------YWWQILGGIVVGSVCSVL 109 (232)
T ss_pred hhHHHHHHHHHHHHHHHhCCCHHHHHhhhHHHHHHHHHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 467777665433333332222211 122 345666666554434222222211 244788888888876654
Q ss_pred H
Q 010772 208 L 208 (501)
Q Consensus 208 ~ 208 (501)
.
T Consensus 110 s 110 (232)
T PRK04288 110 I 110 (232)
T ss_pred H
Confidence 4
No 42
>COG3715 ManY Phosphotransferase system, mannose/fructose/N-acetylgalactosamine-specific component IIC [Carbohydrate transport and metabolism]
Probab=21.60 E-value=2e+02 Score=29.02 Aligned_cols=46 Identities=15% Similarity=0.209 Sum_probs=33.1
Q ss_pred HHHHHHHhhHHHHHHHhCCHHHHHHHHHHHHHHHHhhhccceeeccCC
Q 010772 342 FMIFFSVLGKFGAVFASIPAPIVAALYCLFFAYVGAGGLSFLQFCNLN 389 (501)
Q Consensus 342 ~lillg~~pk~~~lia~IP~~V~ggvli~~f~~i~~~Gi~~l~~v~~~ 389 (501)
+...++ -..+..++..||.-+..|.-+ .-+++-+.|+-++.+.-++
T Consensus 157 ~~~~~g-~~~V~~~l~aiP~~l~~GL~v-aGgmlpavGfAmll~~M~~ 202 (265)
T COG3715 157 LVAYFG-SSAVQSLLDAIPEWLTNGLAV-AGGMLPAVGFAMLLNMMAK 202 (265)
T ss_pred HHHHhh-HHHHHHHHHhchHHHhhhhhH-hcchhHHHHHHHHHHHHHh
Confidence 333444 556888999999999999544 4588888888877766654
No 43
>PRK10711 hypothetical protein; Provisional
Probab=21.59 E-value=3.1e+02 Score=27.12 Aligned_cols=70 Identities=13% Similarity=0.053 Sum_probs=33.4
Q ss_pred cCcchHHHHHHHHHHHhhHhhcCC--ccc---hhhhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHHHHHHHHHHHH
Q 010772 133 LSPLSVVPLISLVGFGLYEFGFPG--VAK---CVEIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFSVVIVWIYAHL 207 (501)
Q Consensus 133 fpp~V~G~~v~lIGlsl~~~~~~~--~~~---~~~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLigi~vG~i~a~~ 207 (501)
+.|+++...+...-+.+...-.+. -++ ++.++-.++++.+=+-+..+.+++ ...++++|+.+|.+++..
T Consensus 31 l~Pll~s~~~ii~~L~~~~i~Y~~Y~~g~~~l~~lLgPAtVALAvPLY~q~~~lk~------~~~~I~~~~~vG~~v~i~ 104 (231)
T PRK10711 31 LNPLLVAMVVIIPFLLLTGIPYEHYFKGSEVLNDLLQPAVVALAFPLYEQLHQIRA------RWKSIISICFIGSVVAMV 104 (231)
T ss_pred ccHHHHHHHHHHHHHHHhCCCHHHHHhccHHHHhhhhHHHHHHHHHHHHhHHHHHH------HHHHHHHHHHHHHHHHHH
Confidence 356666665433333332222111 122 345666666554433222222211 245788888888877654
Q ss_pred H
Q 010772 208 L 208 (501)
Q Consensus 208 ~ 208 (501)
.
T Consensus 105 s 105 (231)
T PRK10711 105 T 105 (231)
T ss_pred H
Confidence 4
No 44
>COG1346 LrgB Putative effector of murein hydrolase [Cell envelope biogenesis, outer membrane]
Probab=20.51 E-value=3.9e+02 Score=26.41 Aligned_cols=80 Identities=11% Similarity=0.149 Sum_probs=37.0
Q ss_pred hhHHHHHHhc-CcchHHHHHHHHHHHhhHhhcCC--ccchh---hhHHHHHHHHHHHHHhhhhhhcccccccchhhHHHH
Q 010772 124 GLWRNVTRFL-SPLSVVPLISLVGFGLYEFGFPG--VAKCV---EIGLPQLVIIVFISQYLPHVIKRGKNIFDRFAVIFS 197 (501)
Q Consensus 124 gl~~~l~~~f-pp~V~G~~v~lIGlsl~~~~~~~--~~~~~---~v~~~~l~l~i~l~~~~~~~~~~~~~~l~~~aiLig 197 (501)
++.+|-++.+ .|.++++.+...=+.+...-.++ .+++| .++-.++++.+=+-+..+.++ + ...+++.|
T Consensus 23 ~l~~r~~~~~l~PlLv~~~~li~~L~~~~i~Y~~Y~~g~~~i~~lLgPAtVAlAvPLYkq~~~ik----~--~w~~I~~g 96 (230)
T COG1346 23 RLYKRTKSPFLNPLLVATVLLIAFLLLFGISYEDYMKGGQWINFLLGPATVALAVPLYKQRHLIK----R--HWKPILAG 96 (230)
T ss_pred HHHHhcCCcccchHHHHHHHHHHHHHHcCCCHHHHhcccHHHHHHHHHHHHHHhhHHHHHHHHHH----H--HHHHHHHH
Confidence 4456666433 47777665432222222222221 22333 455555554443322222211 1 13467888
Q ss_pred HHHHHHHHHHHh
Q 010772 198 VVIVWIYAHLLT 209 (501)
Q Consensus 198 i~vG~i~a~~~g 209 (501)
+++|..++...+
T Consensus 97 ~~vGs~~ai~s~ 108 (230)
T COG1346 97 VLVGSVVAIISG 108 (230)
T ss_pred HHHHHHHHHHHH
Confidence 888877765544
No 45
>PF05437 AzlD: Branched-chain amino acid transport protein (AzlD); InterPro: IPR008407 This family consists of a number of bacterial and archaeal branched-chain amino acid transport proteins. AzlD, a member of this group, has been shown by mutational analysis to be involved in branched-chain amino acid transport, and to be involved in conferring resistance to 4-azaleucine []. However, its exact role in these processes is not yet clear []. Based on its hydropathy profile, it has been suggested to be a membrane protein [].
Probab=20.01 E-value=3.9e+02 Score=22.10 Aligned_cols=15 Identities=20% Similarity=0.463 Sum_probs=8.9
Q ss_pred HHHHHHhcCcchHHH
Q 010772 126 WRNVTRFLSPLSVVP 140 (501)
Q Consensus 126 ~~~l~~~fpp~V~G~ 140 (501)
.++..++.|+.+...
T Consensus 32 ~~~~l~~vp~avl~a 46 (99)
T PF05437_consen 32 VRRFLRYVPPAVLAA 46 (99)
T ss_pred HHHHHHHhHHHHHHH
Confidence 355666667665554
Done!