Query 010774
Match_columns 501
No_of_seqs 170 out of 1581
Neff 10.0
Searched_HMMs 46136
Date Fri Mar 29 04:24:38 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010774.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010774hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1256 Long-chain acyl-CoA sy 100.0 2.1E-69 4.5E-74 536.6 47.3 474 23-501 53-535 (691)
2 PLN02861 long-chain-fatty-acid 100.0 1.7E-67 3.7E-72 558.8 54.7 499 1-500 1-500 (660)
3 PLN02614 long-chain acyl-CoA s 100.0 3.6E-65 7.8E-70 540.7 54.4 493 6-501 10-504 (666)
4 PLN02430 long-chain-fatty-acid 100.0 4.3E-63 9.3E-68 524.3 54.6 496 5-500 4-500 (660)
5 PLN02736 long-chain acyl-CoA s 100.0 5.2E-63 1.1E-67 525.4 52.1 484 3-501 6-495 (651)
6 PTZ00342 acyl-CoA synthetase; 100.0 1E-62 2.2E-67 521.0 51.3 475 4-501 29-578 (746)
7 COG1022 FAA1 Long-chain acyl-C 100.0 4E-63 8.6E-68 499.7 42.7 433 41-501 14-457 (613)
8 KOG1180 Acyl-CoA synthetase [L 100.0 1.7E-61 3.6E-66 459.3 39.0 487 1-501 3-523 (678)
9 PLN02387 long-chain-fatty-acid 100.0 8.6E-60 1.9E-64 502.0 50.0 475 21-501 36-543 (696)
10 PTZ00216 acyl-CoA synthetase; 100.0 7.7E-59 1.7E-63 495.9 49.9 481 3-501 30-544 (700)
11 KOG1177 Long chain fatty acid 100.0 3.1E-58 6.7E-63 430.1 31.3 401 31-500 38-468 (596)
12 KOG1176 Acyl-CoA synthetase [L 100.0 1.6E-57 3.5E-62 455.7 34.7 390 47-501 20-416 (537)
13 COG0318 CaiC Acyl-CoA syntheta 100.0 3.6E-56 7.8E-61 460.9 39.9 391 40-500 8-408 (534)
14 COG0365 Acs Acyl-coenzyme A sy 100.0 8E-56 1.7E-60 441.0 34.5 378 48-500 14-403 (528)
15 PTZ00237 acetyl-CoA synthetase 100.0 1.6E-53 3.4E-58 451.1 35.5 407 43-500 59-499 (647)
16 PLN02654 acetate-CoA ligase 100.0 4.8E-53 1E-57 448.9 38.1 407 40-500 84-520 (666)
17 PRK08180 feruloyl-CoA synthase 100.0 1.9E-52 4.1E-57 441.8 41.2 386 42-500 38-447 (614)
18 PRK06334 long chain fatty acid 100.0 1.7E-52 3.8E-57 435.4 36.8 384 41-500 17-417 (539)
19 PRK07529 AMP-binding domain pr 100.0 4.8E-52 1E-56 439.7 39.5 403 41-500 23-452 (632)
20 PRK12582 acyl-CoA synthetase; 100.0 7.5E-52 1.6E-56 438.1 40.8 389 40-500 46-459 (624)
21 PLN02860 o-succinylbenzoate-Co 100.0 4.6E-52 1E-56 435.2 38.3 391 41-500 5-421 (563)
22 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 3.1E-52 6.7E-57 441.9 37.0 398 44-500 58-482 (625)
23 PRK07788 acyl-CoA synthetase; 100.0 4.5E-52 9.7E-57 434.5 37.7 385 43-500 49-434 (549)
24 PRK04319 acetyl-CoA synthetase 100.0 1E-51 2.2E-56 433.4 37.6 391 43-500 43-439 (570)
25 PRK13295 cyclohexanecarboxylat 100.0 4.8E-51 1E-55 426.4 40.7 387 43-500 24-426 (547)
26 PRK00174 acetyl-CoA synthetase 100.0 4.2E-51 9.1E-56 433.9 39.3 397 45-500 69-490 (637)
27 TIGR02316 propion_prpE propion 100.0 3.7E-51 8E-56 433.2 37.4 399 44-500 53-479 (628)
28 PF00501 AMP-binding: AMP-bind 100.0 3.1E-52 6.6E-57 421.3 27.8 380 49-500 1-395 (417)
29 PLN02574 4-coumarate--CoA liga 100.0 1E-50 2.2E-55 424.8 38.6 410 23-500 22-437 (560)
30 PLN02246 4-coumarate--CoA liga 100.0 3.4E-50 7.4E-55 419.2 40.6 407 21-500 5-419 (537)
31 PRK07656 long-chain-fatty-acid 100.0 2.8E-50 6E-55 418.0 38.9 392 40-500 2-399 (513)
32 PRK05857 acyl-CoA synthetase; 100.0 1.6E-50 3.5E-55 421.3 35.8 396 35-500 6-409 (540)
33 PRK05677 long-chain-fatty-acid 100.0 1.1E-49 2.4E-54 417.3 39.4 397 41-500 22-440 (562)
34 PRK06187 long-chain-fatty-acid 100.0 9.6E-50 2.1E-54 414.8 38.4 394 40-500 3-402 (521)
35 PRK08314 long-chain-fatty-acid 100.0 1.1E-49 2.4E-54 416.5 39.0 395 41-500 8-423 (546)
36 PRK13382 acyl-CoA synthetase; 100.0 7.5E-50 1.6E-54 416.1 37.4 380 43-500 43-423 (537)
37 PRK07769 long-chain-fatty-acid 100.0 4.6E-50 9.9E-55 425.5 35.2 404 25-501 4-472 (631)
38 PRK07638 acyl-CoA synthetase; 100.0 1.7E-49 3.7E-54 409.1 37.8 366 43-500 1-368 (487)
39 PRK03640 O-succinylbenzoic aci 100.0 2.2E-49 4.8E-54 408.1 38.3 364 42-500 1-367 (483)
40 PRK10524 prpE propionyl-CoA sy 100.0 1.2E-49 2.7E-54 422.3 36.9 398 45-500 55-480 (629)
41 PRK09274 peptide synthase; Pro 100.0 1.4E-49 3E-54 416.1 36.3 382 43-500 6-427 (552)
42 COG1021 EntE Peptide arylation 100.0 5.4E-51 1.2E-55 373.2 22.1 384 42-500 27-421 (542)
43 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 6.6E-49 1.4E-53 409.6 40.7 388 43-500 22-424 (538)
44 PLN02330 4-coumarate--CoA liga 100.0 6.1E-49 1.3E-53 410.4 40.1 404 21-500 10-424 (546)
45 PRK06087 short chain acyl-CoA 100.0 6.2E-49 1.3E-53 410.8 40.1 387 42-500 22-417 (547)
46 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 4.9E-49 1.1E-53 409.5 39.1 385 42-500 22-415 (527)
47 PRK08008 caiC putative crotono 100.0 6.2E-49 1.3E-53 408.1 39.6 393 42-500 6-405 (517)
48 PRK06839 acyl-CoA synthetase; 100.0 3.5E-49 7.5E-54 408.0 36.9 373 43-500 2-378 (496)
49 PRK05605 long-chain-fatty-acid 100.0 5.5E-49 1.2E-53 413.3 38.5 397 42-500 31-452 (573)
50 PRK05620 long-chain-fatty-acid 100.0 1.8E-48 3.9E-53 409.4 42.2 405 37-500 4-437 (576)
51 PRK06155 crotonobetaine/carnit 100.0 9.8E-49 2.1E-53 407.9 39.6 389 37-500 15-407 (542)
52 PRK08316 acyl-CoA synthetase; 100.0 8.9E-49 1.9E-53 407.7 38.5 390 41-500 9-402 (523)
53 PRK07008 long-chain-fatty-acid 100.0 2.1E-48 4.5E-53 405.6 40.2 394 42-500 9-416 (539)
54 PRK12476 putative fatty-acid-- 100.0 4E-49 8.7E-54 416.6 34.8 386 41-501 32-484 (612)
55 PRK05852 acyl-CoA synthetase; 100.0 9.5E-49 2E-53 408.0 36.8 393 40-500 13-415 (534)
56 PRK07786 long-chain-fatty-acid 100.0 1.4E-48 2.9E-53 407.4 38.0 387 40-500 14-406 (542)
57 PRK06060 acyl-CoA synthetase; 100.0 4.2E-49 9.2E-54 422.9 34.3 360 43-500 4-372 (705)
58 PRK07470 acyl-CoA synthetase; 100.0 7.8E-49 1.7E-53 408.3 35.2 386 41-500 5-401 (528)
59 PRK12492 long-chain-fatty-acid 100.0 2.4E-48 5.1E-53 407.3 38.7 399 43-500 24-448 (562)
60 PRK07514 malonyl-CoA synthase; 100.0 3.2E-48 7E-53 401.6 38.6 379 43-500 3-384 (504)
61 PRK08315 AMP-binding domain pr 100.0 3.1E-48 6.7E-53 406.7 38.8 391 40-500 13-434 (559)
62 PRK03584 acetoacetyl-CoA synth 100.0 2.7E-48 5.8E-53 413.6 38.1 398 40-500 83-505 (655)
63 TIGR03098 ligase_PEP_1 acyl-Co 100.0 4E-48 8.7E-53 402.0 38.2 387 44-500 1-401 (515)
64 PRK06188 acyl-CoA synthetase; 100.0 2.9E-48 6.4E-53 403.6 37.0 385 40-500 9-400 (524)
65 PRK06145 acyl-CoA synthetase; 100.0 6.3E-48 1.4E-52 398.7 38.9 376 42-500 1-380 (497)
66 PRK07059 Long-chain-fatty-acid 100.0 6.9E-48 1.5E-52 403.6 39.6 402 40-500 20-442 (557)
67 PRK08633 2-acyl-glycerophospho 100.0 2.3E-48 5E-53 440.5 37.8 394 38-500 610-1026(1146)
68 PLN03052 acetate--CoA ligase; 100.0 6.3E-48 1.4E-52 410.9 38.5 402 38-500 169-596 (728)
69 PLN03102 acyl-activating enzym 100.0 7.5E-48 1.6E-52 404.1 37.7 393 41-500 12-427 (579)
70 PRK12583 acyl-CoA synthetase; 100.0 1.1E-47 2.5E-52 402.4 39.1 389 42-500 17-435 (558)
71 TIGR03443 alpha_am_amid L-amin 100.0 1.4E-48 3.1E-53 448.2 35.1 385 42-490 235-646 (1389)
72 PRK08043 bifunctional acyl-[ac 100.0 2.3E-48 5E-53 417.4 34.4 378 41-500 202-598 (718)
73 PRK10946 entE enterobactin syn 100.0 1E-47 2.2E-52 400.2 37.9 384 42-500 24-416 (536)
74 TIGR01217 ac_ac_CoA_syn acetoa 100.0 7.7E-48 1.7E-52 408.4 37.6 400 39-501 83-507 (652)
75 PRK08751 putative long-chain f 100.0 2.2E-47 4.8E-52 400.2 38.9 399 42-500 24-444 (560)
76 TIGR02262 benz_CoA_lig benzoat 100.0 2.6E-47 5.7E-52 395.0 38.6 383 43-500 4-391 (508)
77 PRK06710 long-chain-fatty-acid 100.0 3E-47 6.4E-52 399.3 38.1 399 41-500 22-438 (563)
78 TIGR03205 pimA dicarboxylate-- 100.0 5E-47 1.1E-51 395.7 39.5 401 41-500 19-428 (541)
79 PRK12467 peptide synthase; Pro 100.0 3.8E-48 8.3E-53 472.7 35.5 369 42-500 3094-3478(3956)
80 PRK10252 entF enterobactin syn 100.0 9.8E-48 2.1E-52 439.7 36.7 371 42-500 457-844 (1296)
81 PRK06018 putative acyl-CoA syn 100.0 6.6E-47 1.4E-51 394.8 39.4 396 40-500 7-417 (542)
82 PRK06164 acyl-CoA synthetase; 100.0 5.1E-47 1.1E-51 395.8 37.0 392 40-500 7-413 (540)
83 PRK09088 acyl-CoA synthetase; 100.0 4.1E-47 8.9E-52 391.6 35.2 358 50-500 2-368 (488)
84 PRK06178 acyl-CoA synthetase; 100.0 9.6E-47 2.1E-51 395.8 38.5 402 37-500 27-449 (567)
85 PRK05851 long-chain-fatty-acid 100.0 9.1E-48 2E-52 399.3 30.0 366 44-500 3-403 (525)
86 PLN02479 acetate-CoA ligase 100.0 7.9E-47 1.7E-51 396.0 36.2 399 43-500 20-437 (567)
87 PRK13383 acyl-CoA synthetase; 100.0 1.2E-46 2.6E-51 390.6 36.7 368 41-500 33-403 (516)
88 PRK08974 long-chain-fatty-acid 100.0 3.1E-46 6.8E-51 391.3 40.0 398 42-500 22-439 (560)
89 TIGR01734 D-ala-DACP-lig D-ala 100.0 6.3E-47 1.4E-51 391.8 34.0 368 44-500 1-381 (502)
90 PRK05691 peptide synthase; Val 100.0 3.6E-47 7.9E-52 468.1 36.4 386 42-501 8-437 (4334)
91 PRK13388 acyl-CoA synthetase; 100.0 2.8E-46 6E-51 389.4 35.8 370 43-500 3-387 (540)
92 PRK12467 peptide synthase; Pro 100.0 1.1E-46 2.4E-51 459.9 37.1 372 42-500 1573-1961(3956)
93 PRK12316 peptide synthase; Pro 100.0 6.2E-47 1.3E-51 469.1 35.2 371 42-500 2002-2388(5163)
94 PRK09192 acyl-CoA synthetase; 100.0 1.6E-46 3.4E-51 394.7 32.8 388 34-501 12-447 (579)
95 PRK12316 peptide synthase; Pro 100.0 1.3E-46 2.8E-51 466.2 36.2 371 42-500 510-893 (5163)
96 PRK05691 peptide synthase; Val 100.0 3E-46 6.5E-51 460.0 37.1 373 42-500 3719-4109(4334)
97 PRK07867 acyl-CoA synthetase; 100.0 2E-45 4.4E-50 381.7 37.7 368 42-500 4-388 (529)
98 PRK04813 D-alanine--poly(phosp 100.0 1.3E-45 2.8E-50 382.1 36.1 369 43-500 2-383 (503)
99 PRK07787 acyl-CoA synthetase; 100.0 1.4E-45 3.1E-50 378.1 34.1 345 53-500 10-357 (471)
100 PRK13390 acyl-CoA synthetase; 100.0 2E-45 4.4E-50 380.2 34.7 373 50-500 4-386 (501)
101 PRK05850 acyl-CoA synthetase; 100.0 1.2E-45 2.5E-50 388.5 32.8 387 44-501 2-445 (578)
102 PTZ00297 pantothenate kinase; 100.0 4.2E-44 9.1E-49 393.6 44.7 420 40-499 424-851 (1452)
103 PRK13391 acyl-CoA synthetase; 100.0 3.8E-45 8.2E-50 379.0 34.6 378 50-500 4-389 (511)
104 PRK08162 acyl-CoA synthetase; 100.0 1.9E-44 4.1E-49 376.9 39.1 393 43-500 18-423 (545)
105 PRK08279 long-chain-acyl-CoA s 100.0 7.6E-45 1.6E-49 383.7 35.1 383 40-500 34-446 (600)
106 PRK06814 acylglycerophosphoeth 100.0 9.9E-45 2.1E-49 409.5 37.0 384 40-500 628-1017(1140)
107 PRK08276 long-chain-fatty-acid 100.0 1.5E-44 3.3E-49 373.8 33.1 363 76-500 10-376 (502)
108 PRK07768 long-chain-fatty-acid 100.0 1.9E-44 4.2E-49 376.7 34.1 375 43-500 2-421 (545)
109 TIGR01733 AA-adenyl-dom amino 100.0 4.7E-44 1E-48 360.4 32.6 342 79-500 1-362 (408)
110 PRK07798 acyl-CoA synthetase; 100.0 5.6E-43 1.2E-47 365.0 41.4 392 43-500 3-415 (533)
111 PRK09029 O-succinylbenzoic aci 100.0 5.7E-44 1.2E-48 365.1 32.8 338 43-501 2-340 (458)
112 PRK12406 long-chain-fatty-acid 100.0 1.4E-43 3E-48 367.2 35.5 367 76-500 10-386 (509)
113 TIGR01923 menE O-succinylbenzo 100.0 1.5E-42 3.3E-47 352.6 32.9 326 79-500 1-327 (436)
114 PRK07445 O-succinylbenzoic aci 100.0 1.2E-42 2.6E-47 353.1 30.0 309 78-500 20-331 (452)
115 KOG1175 Acyl-CoA synthetase [L 100.0 4.6E-42 1E-46 342.9 33.1 399 38-501 58-483 (626)
116 KOG1179 Very long-chain acyl-C 100.0 1.1E-41 2.5E-46 325.6 30.8 388 40-499 74-494 (649)
117 PLN03051 acyl-activating enzym 100.0 4.6E-42 1E-46 354.2 29.2 335 109-500 1-364 (499)
118 PRK07868 acyl-CoA synthetase; 100.0 5.6E-41 1.2E-45 369.0 33.7 378 40-500 444-843 (994)
119 PRK08308 acyl-CoA synthetase; 100.0 2.9E-38 6.2E-43 318.6 32.3 290 76-500 7-298 (414)
120 COG1020 EntF Non-ribosomal pep 100.0 1.5E-33 3.3E-38 300.2 33.2 370 42-500 226-603 (642)
121 KOG3628 Predicted AMP-binding 100.0 1.9E-27 4.2E-32 242.0 23.7 399 43-501 770-1227(1363)
122 PRK07824 O-succinylbenzoic aci 99.9 8.6E-27 1.9E-31 230.4 19.6 203 217-500 32-241 (358)
123 TIGR03089 conserved hypothetic 99.9 5E-26 1.1E-30 207.8 22.0 222 49-314 2-227 (227)
124 TIGR02155 PA_CoA_ligase phenyl 99.9 1.2E-22 2.5E-27 205.1 19.5 219 218-500 73-296 (422)
125 TIGR02372 4_coum_CoA_lig 4-cou 99.8 1.3E-19 2.9E-24 178.7 14.9 166 220-449 95-265 (386)
126 TIGR03335 F390_ftsA coenzyme F 99.8 2.3E-18 5.1E-23 174.1 19.2 201 217-474 83-287 (445)
127 KOG1178 Non-ribosomal peptide 99.7 2E-16 4.3E-21 167.3 18.1 325 42-427 35-372 (1032)
128 KOG3628 Predicted AMP-binding 99.7 9.1E-16 2E-20 157.7 17.0 387 42-490 93-555 (1363)
129 COG1541 PaaK Coenzyme F390 syn 99.6 4.9E-14 1.1E-18 136.2 18.6 208 214-472 84-293 (438)
130 TIGR02304 aden_form_hyp probab 99.0 8.8E-09 1.9E-13 102.4 17.0 146 223-423 102-251 (430)
131 PF04443 LuxE: Acyl-protein sy 98.3 4.2E-05 9E-10 74.6 17.2 204 219-475 88-313 (365)
132 COG1541 PaaK Coenzyme F390 syn 95.1 0.17 3.8E-06 50.1 10.0 109 76-185 108-223 (438)
133 PF03321 GH3: GH3 auxin-respon 92.3 1.2 2.5E-05 46.4 10.7 98 309-421 200-307 (528)
134 PLN02247 indole-3-acetic acid- 86.7 40 0.00088 35.5 16.6 30 219-248 88-118 (606)
135 TIGR03335 F390_ftsA coenzyme F 86.0 5.5 0.00012 40.5 10.1 82 76-160 104-187 (445)
136 PLN02620 indole-3-acetic acid- 84.9 10 0.00022 39.7 11.2 30 218-247 99-129 (612)
137 TIGR02155 PA_CoA_ligase phenyl 84.2 5.8 0.00012 40.0 9.2 88 77-165 94-183 (422)
138 TIGR03089 conserved hypothetic 78.9 14 0.00031 33.6 8.9 54 95-150 171-226 (227)
139 PRK07656 long-chain-fatty-acid 78.6 30 0.00065 35.6 12.5 105 56-166 164-272 (513)
140 PRK06187 long-chain-fatty-acid 74.1 28 0.0006 35.9 10.7 119 58-182 167-291 (521)
141 PF00501 AMP-binding: AMP-bind 69.3 50 0.0011 32.9 11.0 122 56-183 153-288 (417)
142 TIGR01923 menE O-succinylbenzo 66.9 35 0.00077 34.2 9.4 116 57-181 110-228 (436)
143 PRK08315 AMP-binding domain pr 66.9 77 0.0017 33.1 12.3 100 57-161 198-301 (559)
144 TIGR01733 AA-adenyl-dom amino 66.2 58 0.0012 32.2 10.7 123 56-183 118-245 (408)
145 PRK12583 acyl-CoA synthetase; 65.7 92 0.002 32.5 12.6 101 56-161 199-303 (558)
146 COG4009 Uncharacterized protei 63.7 32 0.00069 25.0 5.6 65 77-152 9-76 (88)
147 KOG1176 Acyl-CoA synthetase [L 62.7 58 0.0013 34.0 9.9 93 237-330 43-137 (537)
148 PLN02565 cysteine synthase 60.6 85 0.0018 30.4 10.2 69 90-158 53-122 (322)
149 TIGR03098 ligase_PEP_1 acyl-Co 60.4 94 0.002 32.0 11.3 86 76-165 179-265 (515)
150 PRK06334 long chain fatty acid 60.4 1.7E+02 0.0037 30.5 13.3 122 56-182 181-309 (539)
151 PRK03640 O-succinylbenzoic aci 57.6 90 0.0019 31.8 10.6 120 56-181 139-263 (483)
152 cd01445 TST_Repeats Thiosulfat 56.5 32 0.0007 28.4 5.7 41 88-128 81-124 (138)
153 PRK11761 cysM cysteine synthas 55.6 1.1E+02 0.0023 29.3 9.8 66 91-157 51-117 (296)
154 KOG1177 Long chain fatty acid 51.3 1.7E+02 0.0036 29.9 10.2 101 56-161 232-336 (596)
155 PLN02556 cysteine synthase/L-3 51.3 1.2E+02 0.0027 29.9 9.7 62 96-157 103-165 (368)
156 PRK09188 serine/threonine prot 50.4 6.3 0.00014 38.8 0.6 11 490-500 206-216 (365)
157 TIGR01139 cysK cysteine syntha 50.3 1.6E+02 0.0035 27.9 10.2 66 93-159 47-113 (298)
158 PRK07788 acyl-CoA synthetase; 50.1 94 0.002 32.4 9.4 103 77-183 226-334 (549)
159 PLN03051 acyl-activating enzym 49.4 1E+02 0.0022 31.8 9.4 104 57-165 118-224 (499)
160 PRK04319 acetyl-CoA synthetase 49.2 1.5E+02 0.0031 31.2 10.7 122 56-182 203-333 (570)
161 PLN03013 cysteine synthase 48.1 1.6E+02 0.0035 29.7 9.9 66 93-158 164-230 (429)
162 PRK08043 bifunctional acyl-[ac 46.8 2.9E+02 0.0064 30.0 12.8 101 56-161 363-467 (718)
163 TIGR02370 pyl_corrinoid methyl 46.8 2.1E+02 0.0045 25.3 10.6 96 264-403 83-185 (197)
164 KOG0025 Zn2+-binding dehydroge 46.6 72 0.0016 30.0 6.6 65 98-162 157-222 (354)
165 TIGR00936 ahcY adenosylhomocys 46.5 1.8E+02 0.0038 29.2 9.9 65 98-162 28-94 (406)
166 PLN02860 o-succinylbenzoate-Co 46.5 2E+02 0.0044 30.1 11.2 104 56-165 170-276 (563)
167 TIGR03590 PseG pseudaminic aci 46.4 1.4E+02 0.0029 28.2 8.9 69 85-159 18-90 (279)
168 TIGR02379 ECA_wecE TDP-4-keto- 46.2 84 0.0018 31.2 7.8 60 93-156 62-126 (376)
169 PRK08279 long-chain-acyl-CoA s 45.9 2.9E+02 0.0064 29.1 12.5 101 57-163 198-302 (600)
170 PRK10696 tRNA 2-thiocytidine b 45.9 2.3E+02 0.005 26.3 10.2 72 86-157 12-95 (258)
171 PRK08316 acyl-CoA synthetase; 45.8 1.7E+02 0.0036 30.1 10.4 88 238-328 35-124 (523)
172 COG0031 CysK Cysteine synthase 45.4 2.1E+02 0.0046 27.3 9.7 62 95-157 54-116 (300)
173 PRK07638 acyl-CoA synthetase; 45.3 3.5E+02 0.0075 27.5 12.7 87 76-166 161-248 (487)
174 COG0796 MurI Glutamate racemas 45.2 2.1E+02 0.0046 26.7 9.5 82 47-135 19-100 (269)
175 PRK06188 acyl-CoA synthetase; 44.9 2.3E+02 0.0051 29.2 11.3 86 76-165 186-271 (524)
176 PTZ00237 acetyl-CoA synthetase 44.8 1.8E+02 0.0039 31.2 10.7 96 219-320 75-172 (647)
177 PRK11706 TDP-4-oxo-6-deoxy-D-g 44.5 97 0.0021 30.6 8.0 59 94-156 63-126 (375)
178 PLN03052 acetate--CoA ligase; 44.4 1.9E+02 0.0041 31.7 10.8 100 219-322 189-290 (728)
179 PLN00011 cysteine synthase 43.6 2.3E+02 0.0049 27.4 10.1 64 94-158 59-124 (323)
180 PLN02736 long-chain acyl-CoA s 43.1 2.3E+02 0.005 30.4 11.2 88 238-328 77-166 (651)
181 PLN02249 indole-3-acetic acid- 42.9 14 0.00031 38.9 1.8 30 217-246 97-127 (597)
182 PLN03102 acyl-activating enzym 42.9 1.5E+02 0.0033 31.2 9.7 85 239-326 39-125 (579)
183 PF01041 DegT_DnrJ_EryC1: DegT 42.8 85 0.0018 30.8 7.3 65 88-156 51-120 (363)
184 PRK09274 peptide synthase; Pro 42.6 1.3E+02 0.0028 31.4 9.0 99 219-320 20-121 (552)
185 PRK08314 long-chain-fatty-acid 42.5 2.2E+02 0.0047 29.6 10.8 102 56-163 188-293 (546)
186 PRK00174 acetyl-CoA synthetase 41.9 1.9E+02 0.0041 30.9 10.3 98 219-322 81-180 (637)
187 TIGR01136 cysKM cysteine synth 41.4 2.6E+02 0.0056 26.6 10.1 64 94-158 49-113 (299)
188 PRK00865 glutamate racemase; P 41.1 2E+02 0.0043 26.8 9.0 61 47-114 19-79 (261)
189 PRK06839 acyl-CoA synthetase; 41.0 2.2E+02 0.0048 29.0 10.4 88 238-327 26-115 (496)
190 cd01519 RHOD_HSP67B2 Member of 40.6 1E+02 0.0022 23.6 6.1 53 76-128 36-92 (106)
191 PRK10717 cysteine synthase A; 40.5 2.5E+02 0.0054 27.2 10.0 62 96-158 57-119 (330)
192 TIGR00067 glut_race glutamate 40.5 2.3E+02 0.005 26.2 9.3 61 47-114 12-73 (251)
193 PRK05852 acyl-CoA synthetase; 40.3 4.4E+02 0.0095 27.2 13.3 87 76-165 194-283 (534)
194 COG2236 Predicted phosphoribos 40.3 57 0.0012 28.8 4.8 32 76-107 5-36 (192)
195 PRK13295 cyclohexanecarboxylat 40.3 1.7E+02 0.0036 30.6 9.4 97 219-321 38-136 (547)
196 PRK03584 acetoacetyl-CoA synth 40.0 2.8E+02 0.006 29.8 11.3 88 96-183 299-394 (655)
197 cd01449 TST_Repeat_2 Thiosulfa 39.6 73 0.0016 25.1 5.2 41 88-128 64-104 (118)
198 TIGR01217 ac_ac_CoA_syn acetoa 39.6 2.2E+02 0.0047 30.6 10.3 96 220-322 99-196 (652)
199 TIGR02262 benz_CoA_lig benzoat 39.3 3.7E+02 0.0081 27.5 11.8 103 56-162 159-265 (508)
200 TIGR02188 Ac_CoA_lig_AcsA acet 39.1 2.2E+02 0.0049 30.2 10.3 99 218-322 70-170 (625)
201 PLN02654 acetate-CoA ligase 38.9 2.1E+02 0.0045 30.9 10.0 98 219-322 103-202 (666)
202 PRK05620 long-chain-fatty-acid 38.7 3.2E+02 0.0069 28.7 11.3 105 56-163 179-286 (576)
203 TIGR01138 cysM cysteine syntha 38.7 3.3E+02 0.0072 25.8 10.3 63 94-157 50-113 (290)
204 PRK10252 entF enterobactin syn 38.5 2.6E+02 0.0057 32.9 11.6 123 56-183 596-728 (1296)
205 KOG1794 N-Acetylglucosamine ki 38.4 46 0.001 31.2 4.1 75 384-461 70-146 (336)
206 PF06543 Lac_bphage_repr: Lact 38.4 25 0.00054 22.7 1.6 26 386-411 22-47 (49)
207 PRK06164 acyl-CoA synthetase; 38.3 1.6E+02 0.0034 30.6 8.9 104 56-165 179-285 (540)
208 COG2351 Transthyretin-like pro 37.9 47 0.001 26.4 3.5 20 436-455 18-37 (124)
209 TIGR03595 Obg_CgtA_exten Obg f 37.9 39 0.00084 24.1 2.9 19 90-108 45-63 (69)
210 PRK07008 long-chain-fatty-acid 37.9 2.3E+02 0.005 29.4 10.0 88 76-165 194-283 (539)
211 COG0318 CaiC Acyl-CoA syntheta 37.9 4.6E+02 0.0099 27.3 12.2 109 56-167 169-282 (534)
212 COG1064 AdhP Zn-dependent alco 37.8 1.2E+02 0.0027 29.4 7.1 60 94-157 159-218 (339)
213 PF09269 DUF1967: Domain of un 37.3 34 0.00073 24.4 2.5 22 86-107 41-62 (69)
214 PLN02246 4-coumarate--CoA liga 37.3 2E+02 0.0044 29.8 9.5 87 238-327 49-137 (537)
215 TIGR03443 alpha_am_amid L-amin 37.1 3.9E+02 0.0085 31.8 12.7 122 56-182 413-539 (1389)
216 TIGR02316 propion_prpE propion 37.1 2.8E+02 0.006 29.6 10.6 97 219-321 66-164 (628)
217 PRK06702 O-acetylhomoserine am 37.0 1.7E+02 0.0037 29.6 8.3 25 398-422 351-376 (432)
218 PRK08633 2-acyl-glycerophospho 36.9 4.6E+02 0.01 30.3 13.1 121 56-181 780-907 (1146)
219 TIGR02275 DHB_AMP_lig 2,3-dihy 36.8 3.2E+02 0.007 28.2 10.9 104 56-165 181-289 (527)
220 PRK06155 crotonobetaine/carnit 36.8 1.5E+02 0.0033 30.8 8.5 86 239-327 46-133 (542)
221 PRK11493 sseA 3-mercaptopyruva 36.6 61 0.0013 30.6 4.9 53 76-128 200-257 (281)
222 PRK07514 malonyl-CoA synthase; 36.2 2.6E+02 0.0057 28.5 10.0 87 238-327 27-115 (504)
223 COG0399 WecE Predicted pyridox 35.8 1.7E+02 0.0036 29.0 7.7 65 88-156 60-129 (374)
224 PRK05857 acyl-CoA synthetase; 35.6 2E+02 0.0043 30.0 9.1 94 219-322 28-123 (540)
225 PF06277 EutA: Ethanolamine ut 35.5 3.8E+02 0.0083 27.3 10.2 65 43-116 353-422 (473)
226 TIGR01137 cysta_beta cystathio 35.5 2.9E+02 0.0063 28.1 10.0 64 94-158 53-117 (454)
227 KOG0023 Alcohol dehydrogenase, 34.9 4.3E+02 0.0093 25.6 10.2 73 93-168 173-245 (360)
228 KOG1179 Very long-chain acyl-C 34.9 1.8E+02 0.004 30.2 7.9 83 77-164 261-346 (649)
229 TIGR03588 PseC UDP-4-keto-6-de 34.7 2.3E+02 0.0049 28.0 8.9 65 88-155 55-127 (380)
230 PRK13388 acyl-CoA synthetase; 34.6 2.7E+02 0.0059 29.0 9.9 96 219-326 15-113 (540)
231 PRK08308 acyl-CoA synthetase; 34.6 4.7E+02 0.01 25.9 13.3 119 56-181 99-221 (414)
232 PRK08008 caiC putative crotono 34.1 3.2E+02 0.0069 28.0 10.3 101 219-326 21-123 (517)
233 cd06448 L-Ser-dehyd Serine deh 34.0 1.4E+02 0.0031 28.7 7.1 61 97-158 46-106 (316)
234 PRK07798 acyl-CoA synthetase; 33.7 3.1E+02 0.0066 28.2 10.1 88 238-328 27-116 (533)
235 cd01561 CBS_like CBS_like: Thi 33.6 4.1E+02 0.0089 25.0 10.1 64 95-159 45-109 (291)
236 PRK06381 threonine synthase; V 33.1 1.5E+02 0.0033 28.4 7.2 56 103-159 64-119 (319)
237 PRK02261 methylaspartate mutas 32.9 2.8E+02 0.0061 22.8 8.0 45 113-157 18-62 (137)
238 TIGR01734 D-ala-DACP-lig D-ala 32.8 5.4E+02 0.012 26.1 13.4 121 56-181 139-267 (502)
239 PF09153 DUF1938: Domain of un 32.5 66 0.0014 23.7 3.3 36 73-112 26-62 (86)
240 PRK11658 UDP-4-amino-4-deoxy-L 31.9 2.2E+02 0.0047 28.2 8.2 62 89-154 60-126 (379)
241 COG0365 Acs Acyl-coenzyme A sy 31.7 2.5E+02 0.0053 29.4 8.6 100 220-326 25-126 (528)
242 cd02069 methionine_synthase_B1 31.7 3.8E+02 0.0083 24.0 9.8 83 277-402 101-186 (213)
243 cd02070 corrinoid_protein_B12- 31.0 3.8E+02 0.0081 23.7 9.6 47 276-322 94-143 (201)
244 PRK05850 acyl-CoA synthetase; 30.9 3.4E+02 0.0074 28.4 10.1 104 219-328 15-125 (578)
245 cd00640 Trp-synth-beta_II Tryp 30.2 2.1E+02 0.0045 26.2 7.3 64 94-158 42-105 (244)
246 PRK05939 hypothetical protein; 30.1 2.2E+02 0.0047 28.5 7.8 12 411-422 337-348 (397)
247 PLN02574 4-coumarate--CoA liga 30.0 2.5E+02 0.0053 29.4 8.7 99 219-326 53-153 (560)
248 PRK07529 AMP-binding domain pr 29.9 2.6E+02 0.0056 29.9 9.0 97 219-320 39-137 (632)
249 PRK05677 long-chain-fatty-acid 29.7 3.4E+02 0.0075 28.3 9.8 87 238-326 48-136 (562)
250 PRK08276 long-chain-fatty-acid 29.7 2.8E+02 0.006 28.4 8.9 87 238-327 10-98 (502)
251 PRK07787 acyl-CoA synthetase; 29.6 5.6E+02 0.012 25.9 11.1 102 56-164 126-231 (471)
252 cd07050 BMC_EutL_repeat2 ethan 29.4 1.1E+02 0.0025 22.4 4.0 39 92-130 4-43 (87)
253 PRK13383 acyl-CoA synthetase; 29.4 2.1E+02 0.0046 29.5 8.0 85 239-326 60-146 (516)
254 PLN02723 3-mercaptopyruvate su 29.2 1.1E+02 0.0023 29.6 5.3 53 76-128 237-295 (320)
255 PRK09088 acyl-CoA synthetase; 28.9 4E+02 0.0087 27.0 10.0 81 239-322 22-104 (488)
256 COG2885 OmpA Outer membrane pr 28.9 1.4E+02 0.0031 26.1 5.7 65 41-109 97-161 (190)
257 PRK15407 lipopolysaccharide bi 28.8 2.7E+02 0.0059 28.2 8.4 56 97-156 106-166 (438)
258 PRK10524 prpE propionyl-CoA sy 28.8 4.7E+02 0.01 27.8 10.7 97 219-321 67-165 (629)
259 PRK06814 acylglycerophosphoeth 28.8 9.6E+02 0.021 27.8 13.9 121 56-181 791-916 (1140)
260 PF05452 Clavanin: Clavanin; 28.5 26 0.00057 24.3 0.7 8 493-500 73-80 (80)
261 PRK07868 acyl-CoA synthetase; 28.0 7E+02 0.015 28.5 12.3 69 96-165 640-710 (994)
262 PRK07059 Long-chain-fatty-acid 27.9 3.5E+02 0.0076 28.2 9.5 85 238-325 47-133 (557)
263 PRK09162 hypoxanthine-guanine 27.8 1.6E+02 0.0035 25.6 5.7 50 76-127 15-64 (181)
264 PLN02479 acetate-CoA ligase 27.8 4.3E+02 0.0093 27.7 10.1 85 239-326 45-131 (567)
265 PLN02330 4-coumarate--CoA liga 27.7 2.6E+02 0.0057 29.1 8.4 86 238-326 54-141 (546)
266 PRK05605 long-chain-fatty-acid 27.7 2.2E+02 0.0048 29.8 7.9 85 239-326 57-143 (573)
267 PLN02614 long-chain acyl-CoA s 27.1 6.7E+02 0.015 27.0 11.5 87 238-327 78-166 (666)
268 PLN02356 phosphateglycerate ki 26.9 5.2E+02 0.011 26.1 9.7 63 94-157 95-158 (423)
269 PRK10595 SOS cell division inh 26.5 3.2E+02 0.0069 23.4 6.9 66 90-155 69-140 (164)
270 PRK07476 eutB threonine dehydr 26.2 3.8E+02 0.0083 25.8 8.6 49 110-158 74-122 (322)
271 PRK10946 entE enterobactin syn 25.8 5.6E+02 0.012 26.5 10.5 104 56-165 180-288 (536)
272 cd02067 B12-binding B12 bindin 25.7 3.3E+02 0.0072 21.4 7.1 45 114-158 15-59 (119)
273 TIGR02080 O_succ_thio_ly O-suc 25.4 3.4E+02 0.0074 26.9 8.3 25 398-422 308-333 (382)
274 TIGR02372 4_coum_CoA_lig 4-cou 25.4 6.8E+02 0.015 24.8 13.7 123 33-163 70-198 (386)
275 PF04122 CW_binding_2: Putativ 25.3 2.9E+02 0.0063 20.6 8.5 69 84-155 9-78 (92)
276 PLN02861 long-chain-fatty-acid 24.5 4.1E+02 0.0088 28.6 9.3 88 238-328 76-165 (660)
277 PF00464 SHMT: Serine hydroxym 24.4 6.4E+02 0.014 25.3 9.7 63 99-161 107-181 (399)
278 PRK13391 acyl-CoA synthetase; 24.3 5.6E+02 0.012 26.2 10.1 99 219-327 11-111 (511)
279 PF00818 Ice_nucleation: Ice n 24.3 33 0.00072 16.6 0.4 9 414-422 1-9 (16)
280 PRK08574 cystathionine gamma-s 24.2 3.3E+02 0.0071 27.1 7.9 26 397-422 310-336 (385)
281 KOG1250 Threonine/serine dehyd 24.1 2.8E+02 0.0061 27.5 6.8 54 105-160 118-171 (457)
282 PRK07470 acyl-CoA synthetase; 23.5 7.8E+02 0.017 25.2 11.0 123 56-181 161-289 (528)
283 PRK12476 putative fatty-acid-- 23.1 8.4E+02 0.018 25.8 11.4 103 219-327 48-157 (612)
284 COG1167 ARO8 Transcriptional r 23.0 3.6E+02 0.0079 27.5 8.1 85 263-357 176-265 (459)
285 PRK13382 acyl-CoA synthetase; 23.0 7.3E+02 0.016 25.6 10.7 85 77-165 215-300 (537)
286 TIGR01501 MthylAspMutase methy 22.7 4.4E+02 0.0095 21.7 9.6 47 276-322 13-62 (134)
287 PRK07867 acyl-CoA synthetase; 22.6 3.4E+02 0.0074 28.1 8.1 85 239-325 28-114 (529)
288 cd01448 TST_Repeat_1 Thiosulfa 22.6 2.4E+02 0.0051 22.3 5.5 41 88-128 65-106 (122)
289 PRK05638 threonine synthase; V 22.0 2.8E+02 0.0061 28.1 7.0 57 103-160 113-169 (442)
290 PRK08045 cystathionine gamma-s 21.9 4.6E+02 0.01 26.0 8.4 26 397-422 308-334 (386)
291 cd01563 Thr-synth_1 Threonine 21.9 3.1E+02 0.0068 26.3 7.1 57 102-159 70-126 (324)
292 PRK05851 long-chain-fatty-acid 21.6 8.4E+02 0.018 25.1 10.8 95 56-155 150-251 (525)
293 cd01562 Thr-dehyd Threonine de 21.2 4.1E+02 0.009 25.1 7.8 56 102-158 65-120 (304)
294 PF05221 AdoHcyase: S-adenosyl 21.1 5.9E+02 0.013 23.8 8.1 68 98-165 39-108 (268)
295 PRK06382 threonine dehydratase 21.1 5.7E+02 0.012 25.6 8.9 51 109-159 79-129 (406)
296 TIGR02822 adh_fam_2 zinc-bindi 20.8 3.7E+02 0.008 25.8 7.4 58 94-155 158-215 (329)
297 PLN02387 long-chain-fatty-acid 20.7 4.5E+02 0.0097 28.6 8.7 88 238-328 105-194 (696)
298 PLN02409 serine--glyoxylate am 20.6 6.2E+02 0.014 25.1 9.2 70 87-157 44-115 (401)
299 cd02070 corrinoid_protein_B12- 20.6 5.9E+02 0.013 22.4 10.3 81 77-157 50-141 (201)
300 PRK08162 acyl-CoA synthetase; 20.3 4E+02 0.0087 27.6 8.1 86 239-327 43-130 (545)
301 PLN02550 threonine dehydratase 20.1 1.1E+03 0.023 25.2 11.6 59 99-160 156-214 (591)
302 PRK08134 O-acetylhomoserine am 20.1 5E+02 0.011 26.3 8.3 62 106-167 82-146 (433)
No 1
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=2.1e-69 Score=536.62 Aligned_cols=474 Identities=42% Similarity=0.731 Sum_probs=421.7
Q ss_pred CCccccccc--CCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCC
Q 010774 23 GPVYRCIYA--KDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (501)
Q Consensus 23 ~~~~~~~~~--~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~ 100 (501)
++++|+... ...++....+..|+++.|.+.+..+|+.+++-.....+ ..++++++||+|+.+++.+++..|+++|++
T Consensus 53 ~~~~~s~~~~~~~~~~~~~~~~~T~~~~f~~~~~~~~~~p~LG~r~~~~-~~~~~~~~tY~q~~e~~~~~~~~l~~lG~~ 131 (691)
T KOG1256|consen 53 DGSRRSAVLPREELFSCPFDGPLTLYEGFRRSVEKSGNGPMLGTRVIVD-GKGPYEWLTYKQVYERAENLGSGLRKLGVK 131 (691)
T ss_pred CCceeeeeccCCCCCCCCCCCcccHHHHhhcchhccCCCCceeEEeccc-CCCCcEEEEHHHHHHHHHHHHHHHHHhCCC
Confidence 378888777 45555556789999999999999999999998873322 557889999999999999999999999999
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEc-CCChhhhhhcCcc-CCCCccEEE
Q 010774 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ-ENKIPSILSCLPR-CCLYLKTIV 178 (501)
Q Consensus 101 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~-~~~~~~~~~~~~~-~~~~~~~v~ 178 (501)
+++.|+|+.-|++||+++.+||...|.+++||..+++++++.++++.+.+.++|++ ++.+..+.+.... ..+.++.++
T Consensus 132 ~~~~VGIy~~N~pEWiis~~a~~~~~~v~VplYdTlg~ea~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI 211 (691)
T KOG1256|consen 132 EDSKVGIYAFNRPEWIISEMACYAYSLVNVPLYDTLGAEAVHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAII 211 (691)
T ss_pred CCceEEEeccCChhhHHhHHHHHhcCCEEeecccCCCHHHHHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEE
Confidence 99999999999999999999999999999999999999999999999999999999 5566666665554 367899999
Q ss_pred EecCCChhhHHHhhhcCceEeeHHHHHhcC-CCCCCC-CCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceee
Q 010774 179 SFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (501)
Q Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~ 256 (501)
.++......+......++.+.+|+++.+.+ .....+ .+..+++.+.|+|||||||.||||++||+|++..+..+....
T Consensus 212 ~~~~~~~~~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~ 291 (691)
T KOG1256|consen 212 QLDEPSDELKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLS 291 (691)
T ss_pred EecCCchhhhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhh
Confidence 999999988888888899999999999888 333333 477899999999999999999999999999999665322211
Q ss_pred -eeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhh
Q 010774 257 -VVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (501)
Q Consensus 257 -~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (501)
.........+|++++++||.|++..++-...++.|+.+.+.++|+..+.+.+++.+||.+.++|.+++++.+.+++...
T Consensus 292 ~~~~~~~~~~~dv~lSyLPLAHi~er~~~~~~~~~G~~IgF~~gD~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~ 371 (691)
T KOG1256|consen 292 AAENAKATVGDDVYLSYLPLAHIFERVVELYTFYIGAKIGFARGDILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQ 371 (691)
T ss_pred hcccccccccCceEEEeCcHHHHHHHHHHHhHhhcccEEEEecCChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHh
Confidence 1111233447999999999999999987777899999999999999999999999999999999999999999999999
Q ss_pred cCChhHHHHHHHHHHHHh-hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeee
Q 010774 336 SGGALSKKLFEFAYNYKL-GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQG 414 (501)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~ 414 (501)
..++++++++++|..+|. ..+.+|.... ..+.++++.++++++.+|+++|.+++|++|+++++.+.|+..+|+.|+++
T Consensus 372 ~sgflkr~l~~~A~~~k~~~~~~~G~~~~-~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~~g~~v~eG 450 (691)
T KOG1256|consen 372 KSGFLKRKLFNFAMAYKLEHRLMKGKSRS-RDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAALGCRVLEG 450 (691)
T ss_pred cchHHHHHHHHHHHHHHHHHHhhCCCCcc-cchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHhcCceeeec
Confidence 999999999999999999 6688887775 68999999999999999999999999999999999999999999999999
Q ss_pred ecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccC
Q 010774 415 YGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDG 493 (501)
Q Consensus 415 yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dg 493 (501)
||+||+++.++...+++. ..+++|.|+|+++++++|+++.+..+.+ ..|||||||++||.|||++|+.|++++ .||
T Consensus 451 YGlTEts~g~~~~~~~d~-~lgsvG~p~p~~~vKL~dvpe~ny~a~~--~~GEIcirG~~Vf~GYyK~p~~T~e~ideDG 527 (691)
T KOG1256|consen 451 YGLTETSAGTTLTLPGDN-VLGSVGPPVPGNEVKLVDVPEMNYDADG--SKGEICVRGPNVFMGYYKDPEKTAEAIDEDG 527 (691)
T ss_pred ccccccCCceEeccCCCC-CCCCcCCcccCceEEEechHHhCcCcCC--CcceEEEecchhceeccCChHHHhhhhcccc
Confidence 999999977776666555 6699999999999999999999887776 589999999999999999999999999 999
Q ss_pred cccCCCCC
Q 010774 494 WFHTEVHR 501 (501)
Q Consensus 494 w~~TGD~~ 501 (501)
|+||||.+
T Consensus 528 WLhTGDiG 535 (691)
T KOG1256|consen 528 WLHTGDIG 535 (691)
T ss_pred ccccccce
Confidence 99999975
No 2
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.7e-67 Score=558.85 Aligned_cols=499 Identities=78% Similarity=1.301 Sum_probs=406.4
Q ss_pred CCccceeeecCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeH
Q 010774 1 MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTY 80 (501)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty 80 (501)
|-+.||+.+++.++.+..+|.++++||+...++.+...+....|+.+.|.+.++++|+++|+.+....++..+.++.+||
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~~~~~p~~~al~~~~~~~~~~g~~~~~Ty 80 (660)
T PLN02861 1 MAETYTVKVEESRPATGGKPSAGPVYRSIYAKDGLLDLPADIDSPWQFFSDAVKKYPNNQMLGRRQVTDSKVGPYVWLTY 80 (660)
T ss_pred CCccceeeeccCCCCCCCCCCCCCcccccccccccccCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCceEEEH
Confidence 88999999999999877899999999999888877766777889999999999999999999763111223345578999
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010774 81 QEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (501)
Q Consensus 81 ~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~ 160 (501)
+||.++++++|++|.++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++|+.++++++|++.+..
T Consensus 81 ~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~v~~~~~~~ 160 (660)
T PLN02861 81 KEVYDAAIRIGSAIRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSIAFVQESKI 160 (660)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCEEEECHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999987665
Q ss_pred hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEe
Q 010774 161 PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVL 240 (501)
Q Consensus 161 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~ 240 (501)
..+..........++.++.++..................+++++..............++++++|+|||||||.||||++
T Consensus 161 ~~~~~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~l 240 (660)
T PLN02861 161 SSILSCLPKCSSNLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVIL 240 (660)
T ss_pred HHHHHhhhhCCCCCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEE
Confidence 54433332222246667776543221111111123345678877754422222234467999999999999999999999
Q ss_pred ecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecc
Q 010774 241 TNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVP 320 (501)
Q Consensus 241 sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P 320 (501)
||.+++..+......+.........+|++++.+|++|++++...+.+++.|+++++.++++..+++.|++++||+++++|
T Consensus 241 th~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP 320 (660)
T PLN02861 241 TNRAIIAEVLSTDHLLKVTDRVATEEDSYFSYLPLAHVYDQVIETYCISKGASIGFWQGDIRYLMEDVQALKPTIFCGVP 320 (660)
T ss_pred ecHHHHHHHHHHHhccccccccCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCcEEeech
Confidence 99999988776544331111124678999999999999998876678999999999878999999999999999999999
Q ss_pred hHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHH
Q 010774 321 RVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVE 400 (501)
Q Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~ 400 (501)
++++.+.+.........+...+.+++++..++...++.+.......+..+++++++++..+|+++|.+++||+++++++.
T Consensus 321 ~~~~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~~ 400 (660)
T PLN02861 321 RVYDRIYTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHVE 400 (660)
T ss_pred HHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHHH
Confidence 99999999888888889999999999999999988877655555567788999999999999999999999999999975
Q ss_pred HHHHHhhCC-CeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccc
Q 010774 401 EFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGY 479 (501)
Q Consensus 401 ~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY 479 (501)
+ |.+.++. .+++.||+||+++.++....+.....+++|+|+|+++++|+|.++........++.|||+|+||+++.||
T Consensus 401 ~-~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vrGp~v~~GY 479 (660)
T PLN02861 401 E-FLRVTSCSVLSQGYGLTESCGGCFTSIANVFSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLRGNTLFSGY 479 (660)
T ss_pred H-HHHHHcCCCeeEecchhhhhhceeecccccCCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEcCCcccccc
Confidence 5 5555664 7999999999987766544433334689999999999999984332211222336899999999999999
Q ss_pred cCCcccchhhhccCcccCCCC
Q 010774 480 YKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 480 ~~~~~~~~~~~~dgw~~TGD~ 500 (501)
|++|+.|++.|.||||+|||.
T Consensus 480 ~~~pe~T~~~f~dGw~~TGDl 500 (660)
T PLN02861 480 HKRQDLTEEVLIDGWFHTGDI 500 (660)
T ss_pred cCCHHHHHhhhhccCcccCce
Confidence 999999999999999999995
No 3
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=3.6e-65 Score=540.70 Aligned_cols=493 Identities=55% Similarity=0.982 Sum_probs=387.0
Q ss_pred eeeecCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHH
Q 010774 6 TVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYD 85 (501)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~ 85 (501)
+++..+. .++..|.+++++|+......+........|+.++|+++++.+|+++|+.+....++..+.++.+||+||.+
T Consensus 10 ~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~l~~~a~~~pd~~al~~~~~~~~~~~~~~~~Ty~el~~ 87 (666)
T PLN02614 10 QVEEGKE--GSDGRPSVGPVYRSIFAKDGFPNPIEGMDSCWDVFRMSVEKYPNNPMLGRREIVDGKPGKYVWQTYQEVYD 87 (666)
T ss_pred Eeccccc--CCCCCCCCCCcccCcccccccCCCCCCCCcHHHHHHHHHHhCCCCCeEEEecccCCCCCCcEEeEHHHHHH
Confidence 3444443 34567888999999877766654345667999999999999999999986410012223445789999999
Q ss_pred HHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 86 AAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 86 ~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
+++++|++|.++|+++||+|+|+++|++++++++|||+++|++++|+++.++.+++.++|+.++++++|++.+....+..
T Consensus 88 ~v~~lA~~L~~~Gv~~Gd~Vai~~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 167 (666)
T PLN02614 88 IVIKLGNSLRSVGVKDEAKCGIYGANSPEWIISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSIVFVEEKKISELFK 167 (666)
T ss_pred HHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCEEEECHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999998765544433
Q ss_pred cCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 010774 166 CLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 244 (501)
Q Consensus 166 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~ 244 (501)
........++.++.++.............+.....+++++.... .........++++++|+|||||||.||||++||++
T Consensus 168 ~~~~~~~~l~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~n 247 (666)
T PLN02614 168 TCPNSTEYMKTVVSFGGVSREQKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNES 247 (666)
T ss_pred hcccccccceEEEEeCCCChHHhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHH
Confidence 33222223556666654321111111112334567887765431 11122334578999999999999999999999999
Q ss_pred HHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHH
Q 010774 245 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYD 324 (501)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~ 324 (501)
++..+......+......+..+|++++.+|++|+++....+.+++.|+++++.++++..+++.+++++||+++++|++++
T Consensus 248 l~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~~~~l~~G~~v~~~~~~~~~~~~~i~~~~~T~~~~vP~~~~ 327 (666)
T PLN02614 248 IVTLIAGVIRLLKSANAALTVKDVYLSYLPLAHIFDRVIEECFIQHGAAIGFWRGDVKLLIEDLGELKPTIFCAVPRVLD 327 (666)
T ss_pred HHHHHHHHHhhccccccCCCCCcEEEEeccHHHHHHHHHHHHHHHhCCEEEEeCCCHHHHHHHHHHhCCeEEEecHHHHH
Confidence 99887664433211112467889999999999999987666778999999998889999999999999999999999999
Q ss_pred HHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 010774 325 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 404 (501)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~ 404 (501)
.+.+.+.......+...+.++.++..+++..+.++.......+..+++.+++++..++++||.+++||+++++.+ ++|.
T Consensus 328 ~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~~-~~~~ 406 (666)
T PLN02614 328 RVYSGLQKKLSDGGFLKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASHV-ESFL 406 (666)
T ss_pred HHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHHH-HHHH
Confidence 999888877777888888999999998888877765555556777888899999999999999999999999876 5555
Q ss_pred Hhh-CCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCc
Q 010774 405 VTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 483 (501)
Q Consensus 405 ~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~ 483 (501)
+.+ ++.+++.||+||++++++.........++++|+|+||++++|+|++++...+...++.|||+|+||++|.|||++|
T Consensus 407 ~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~p 486 (666)
T PLN02614 407 RVVACCHVLQGYGLTESCAGTFVSLPDELDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKRE 486 (666)
T ss_pred HHhcCCCEEeeCchHhhhhheeeeccccCCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCH
Confidence 555 5899999999999876555444333346899999999999999854442222334489999999999999999999
Q ss_pred ccchhhhccCcccCCCCC
Q 010774 484 DLTEEVIVDGWFHTEVHR 501 (501)
Q Consensus 484 ~~~~~~~~dgw~~TGD~~ 501 (501)
+.|++.|.||||+|||.+
T Consensus 487 e~T~~~f~dGw~~TGDlg 504 (666)
T PLN02614 487 DLTKEVLIDGWLHTGDVG 504 (666)
T ss_pred HHhhhhhccCCcccceEE
Confidence 999999999999999963
No 4
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.3e-63 Score=524.29 Aligned_cols=496 Identities=48% Similarity=0.883 Sum_probs=395.7
Q ss_pred ceeeecCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHH
Q 010774 5 YTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVY 84 (501)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~ 84 (501)
|++++...-....++|.++++||+...++.+...+....|+.+.|.+.++.+|+++|+.+.+..++..+.++.+||+|+.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~ 83 (660)
T PLN02430 4 FAAQVEEGVKGKDGKPSVGPVYRNLLSKKGFPPIDSDITTAWDIFSKSVEKYPDNKMLGWRRIVDGKVGPYMWKTYKEVY 83 (660)
T ss_pred eeeeecccCCCCCCCCCCCCccccccccccccCCCCCCCCHHHHHHHHHHhCCCCceEEEEecCCCCCCCcEEEEHHHHH
Confidence 45566533333357889999999988776665555688999999999999999999997641112333455678999999
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhh
Q 010774 85 DAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL 164 (501)
Q Consensus 85 ~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~ 164 (501)
++++++|.+|.++|+++||+|+|+++|++||++++|||+++|++++|+++.++++++.++++.++++++|++........
T Consensus 84 ~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~ew~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~v~~~~~~~~~~~ 163 (660)
T PLN02430 84 EEVLQIGSALRASGAEPGSRVGIYGSNCPQWIVAMEACAAHSLICVPLYDTLGPGAVDYIVDHAEIDFVFVQDKKIKELL 163 (660)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeccCCCHHHHHHHHhccCCCEEEECHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999875433322
Q ss_pred hcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecH
Q 010774 165 SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQ 243 (501)
Q Consensus 165 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~ 243 (501)
.........++.++.++.............+.....+++++.... ......+..++++++|+|||||||.||||++||+
T Consensus 164 ~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~ 243 (660)
T PLN02430 164 EPDCKSAKRLKAIVSFTSVTEEESDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHE 243 (660)
T ss_pred hhhcccCCCceEEEEECCCChHHhhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecH
Confidence 222222235667777754332111111112334567888775442 1222233467899999999999999999999999
Q ss_pred HHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHH
Q 010774 244 AIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVY 323 (501)
Q Consensus 244 ~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~ 323 (501)
+++..+..+..........+..+|++++.+|++|+++....+.++..|+++++...++..+++.+++++||++.++|.++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~i~~~~~~~~~l~~~l~~~~pt~~~~vP~~~ 323 (660)
T PLN02430 244 AVATFVRGVDLFMEQFEDKMTHDDVYLSFLPLAHILDRMIEEYFFRKGASVGYYHGDLNALRDDLMELKPTLLAGVPRVF 323 (660)
T ss_pred HHHHHHHHHHhhccccccCCCCCCEEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCChhhHHHHHHHhCCcEEEecHHHH
Confidence 99988766432211111145788999999999999998877778999999998877889999999999999999999999
Q ss_pred HHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHH
Q 010774 324 DRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFL 403 (501)
Q Consensus 324 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~ 403 (501)
+.+.+.............+.+++++...+...++.+.......+..+.+.+++++..+|+++|.+++||+++++++.+.+
T Consensus 324 ~~l~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~~~ 403 (660)
T PLN02430 324 ERIHEGIQKALQELNPRRRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEEFL 403 (660)
T ss_pred HHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHHHH
Confidence 99999888888888888999999999999999887765444566778888999999999999999999999999987766
Q ss_pred HHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCc
Q 010774 404 RVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 483 (501)
Q Consensus 404 ~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~ 483 (501)
+...++.+++.||+||++++++.........++++|+|.|+++++|+|+++....+.+.++.|||+|+|++++.|||++|
T Consensus 404 ~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~ 483 (660)
T PLN02430 404 RVTSCAFVVQGYGLTETLGPTTLGFPDEMCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNP 483 (660)
T ss_pred HHhcCCCeeeecchhhhhhceEeeccccCCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCCh
Confidence 65434689999999999887766554444456999999999999998855544344444468999999999999999999
Q ss_pred ccchhhhccCcccCCCC
Q 010774 484 DLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 484 ~~~~~~~~dgw~~TGD~ 500 (501)
+.|++.|.||||+|||.
T Consensus 484 e~t~~~~~dGw~~TGDi 500 (660)
T PLN02430 484 ELTEEVMKDGWFHTGDI 500 (660)
T ss_pred HHhhhhhhccceeccce
Confidence 99999999999999995
No 5
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.2e-63 Score=525.38 Aligned_cols=484 Identities=38% Similarity=0.650 Sum_probs=392.0
Q ss_pred ccceeeecCCCCCCCCCCCCCCcccccccCCCCCCC---CCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEee
Q 010774 3 ETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLES---PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLT 79 (501)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~T 79 (501)
+.|++++++.... +.+.+||+...+..+... +....++.++|+++++.+|+++|+.+.-..++..+.++.+|
T Consensus 6 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~lT 80 (651)
T PLN02736 6 QGYSVVLPEKLQT-----GKWNVYRSARSPLKLVSRFPDHPEIGTLHDNFVYAVETFRDYKYLGTRIRVDGTVGEYKWMT 80 (651)
T ss_pred cCcceeCCCCCCC-----CCCCeecCccccccccccCCCCCCCCCHHHHHHHHHHhCCCCCeEEEEecCCCCCCCcEEEE
Confidence 5688887755544 899999987666444432 35667999999999999999999964200023334567899
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 80 YQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 80 y~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
|+||.++++++|++|+++|+++||+|+|+++|+++++++++||+++|++++|+++.++.+++.++|+.++++++|++.+.
T Consensus 81 y~el~~~v~~lA~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~l~~~~~~ 160 (651)
T PLN02736 81 YGEAGTARTAIGSGLVQHGIPKGACVGLYFINRPEWLIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAAIFCVPQT 160 (651)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCEEEECHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998776
Q ss_pred hhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceE
Q 010774 160 IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGV 238 (501)
Q Consensus 160 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v 238 (501)
.+.+..... ....++.++.++...................+++++.... .........++++++|+|||||||.||||
T Consensus 161 ~~~~~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV 239 (651)
T PLN02736 161 LNTLLSCLS-EIPSVRLIVVVGGADEPLPSLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGV 239 (651)
T ss_pred HHHHHHHhh-cCCCceEEEEECCCchhhhhhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEE
Confidence 655544333 2345566666643221111111112334667888776542 12223344678999999999999999999
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEe
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSG 318 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~ 318 (501)
++||++++..+..+...+ .+..+|++++.+|++|.+++..++.+++.|+++++.+.++..+++.++++++|++++
T Consensus 240 ~lsh~~l~~~~~~~~~~~-----~~~~~d~~l~~lPl~h~~~~~~~~~~l~~G~~i~~~~~~~~~~~~~i~~~~~t~~~~ 314 (651)
T PLN02736 240 VLTHGNLIANVAGSSLST-----KFYPSDVHISYLPLAHIYERVNQIVMLHYGVAVGFYQGDNLKLMDDLAALRPTIFCS 314 (651)
T ss_pred EEecHHHHHHHHHHHhcc-----CCCCCCEEEEeCCHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEec
Confidence 999999999888776655 677899999999999999998888899999999998889999999999999999999
Q ss_pred cchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHH
Q 010774 319 VPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIH 398 (501)
Q Consensus 319 ~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~ 398 (501)
+|++++.+.+.+.......+.+.+.+++++...+...+..+.. ..+.++++.+++++..+++++|.+++||++++++
T Consensus 315 vP~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~ 391 (651)
T PLN02736 315 VPRLYNRIYDGITNAVKESGGLKERLFNAAYNAKKQALENGKN---PSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPD 391 (651)
T ss_pred chHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHcCCC---CCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHH
Confidence 9999999999998889999999999999998888766665432 2245678888999999989999999999999999
Q ss_pred HHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccC-CCCCCCceEEEecCCccc
Q 010774 399 VEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDA-LSSVPRGEICLRGNTLFS 477 (501)
Q Consensus 399 ~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~-~~~~~~Gei~v~g~~v~~ 477 (501)
+.+++++.+|+.+++.||+||++++++...... ..++++|+|+||++++|+|.+++.... ...++.|||+|+||++|.
T Consensus 392 ~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~-~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~ 470 (651)
T PLN02736 392 VMEFLRICFGGRVLEGYGMTETSCVISGMDEGD-NLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFK 470 (651)
T ss_pred HHHHHHHHhCCCeEEEechHHhchheeccCCCC-CCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCcccc
Confidence 999999888999999999999987766544333 345899999999999999833322111 112257999999999999
Q ss_pred cccCCcccchhhh-ccCcccCCCCC
Q 010774 478 GYYKRPDLTEEVI-VDGWFHTEVHR 501 (501)
Q Consensus 478 gY~~~~~~~~~~~-~dgw~~TGD~~ 501 (501)
|||++++.|++.| .||||+|||.+
T Consensus 471 GY~~~~~~t~~~~~~dgw~~TGDlg 495 (651)
T PLN02736 471 GYYKDEVQTREVIDEDGWLHTGDIG 495 (651)
T ss_pred ccccCHHHHHhhhccCCCeeccceE
Confidence 9999999999998 69999999963
No 6
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-62 Score=521.02 Aligned_cols=475 Identities=24% Similarity=0.421 Sum_probs=376.5
Q ss_pred cceeeecCCCCCCCCCCCCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHH
Q 010774 4 TYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEV 83 (501)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el 83 (501)
.|+..++..... +++++||....+...+ .....|+.++|.++++++|+++|+++. + .+..++.+||+||
T Consensus 29 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~~~~~p~~~Al~~~---~-~g~~~~~~Ty~el 97 (746)
T PTZ00342 29 GYSEICEKATNE-----NESSVYCMKDHKKKSS--LYVYKHIMKLLLEKYKLNNNKIAIVEH---S-CGEPQNYITYGNF 97 (746)
T ss_pred eeeeEecCCCCC-----CCCCceecCchhhccc--ccccchHHHHHHHHHhhcCCceeEecc---C-CCCCceeeeHHHH
Confidence 355555555544 7888999777666622 255789999999999999999999863 2 1223578999999
Q ss_pred HHHHHHHHHHHHh---CCCCCC-----------CEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 010774 84 YDAAIRFGSAMRS---RGVNPG-----------DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAE 149 (501)
Q Consensus 84 ~~~v~~~A~~L~~---~gv~~g-----------d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 149 (501)
.++++++|++|.+ +|+++| |+|+|+++|+++|+++.+||+++|++++|+++.++.+++.++|+.++
T Consensus 98 ~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~el~~il~~s~ 177 (746)
T PTZ00342 98 FKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFKLLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDVIVDILNETK 177 (746)
T ss_pred HHHHHHHHHHHHHHhhcCCCcCccccccccccccEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHhcCC
Confidence 9999999999997 499999 99999999999999999999999999999999999999999999999
Q ss_pred ceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChh-------------------------------------------
Q 010774 150 VSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS------------------------------------------- 186 (501)
Q Consensus 150 ~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------------------------------------------- 186 (501)
++++|++.+..+.+..... .++.++.++.++.....
T Consensus 178 ~~~lv~~~~~~~~l~~~~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (746)
T PTZ00342 178 LEWLCLDLDLVEGLLERKN-ELPHLKKLIILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLG 256 (746)
T ss_pred CCEEEEcHHHHHHHHHhhc-cCCCceEEEEECCCCccccccccccccccccccccccccccccccccccccccccccccc
Confidence 9999998776666544332 34567778777642110
Q ss_pred --------------hHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhc
Q 010774 187 --------------QKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV 252 (501)
Q Consensus 187 --------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~ 252 (501)
........+.....++++..............++++++|+|||||||.||||++||+++++.+...
T Consensus 257 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~ 336 (746)
T PTZ00342 257 PLEYDKEKLEKIKDLKEKAKKLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPL 336 (746)
T ss_pred ccccchhhhhhhHHHHHHhhcCCCEEEEHHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHH
Confidence 000001112233445555433322222334567999999999999999999999999999988764
Q ss_pred ceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHH
Q 010774 253 DQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 332 (501)
Q Consensus 253 ~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 332 (501)
.... .......|++++.+|++|++++...+.+++.|+++++.+.++..+++.|++++||+++++|.+++++.+....
T Consensus 337 ~~~~---~~~~~~~d~~ls~LPL~Hi~~~~~~~~~l~~G~~i~~~~~~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~ 413 (746)
T PTZ00342 337 CKHS---IFKKYNPKTHLSYLPISHIYERVIAYLSFMLGGTINIWSKDINYFSKDIYNSKGNILAGVPKVFNRIYTNIMT 413 (746)
T ss_pred hhcc---cccCCCCCeEEEeCcHHHHHHHHHHHHHHHcCCEEEEeCCCHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHH
Confidence 3221 0012345899999999999999888889999999999877999999999999999999999999999998888
Q ss_pred HhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHH--HHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCC
Q 010774 333 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL--VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP 410 (501)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~ 410 (501)
.....+...+.+++++...+....... ..+..+.+ .++++++.++++||.+++||+++++++.++|+..+|+.
T Consensus 414 ~~~~~~~~~~~~~~~a~~~~~~~~~~~-----~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~g~~ 488 (746)
T PTZ00342 414 EINNLPPLKRFLVKKILSLRKSNNNGG-----FSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLLNVN 488 (746)
T ss_pred HHhhcCHHHHHHHHHHHHHHHHhhcCC-----cchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhcCCC
Confidence 888888888999999998887754321 12333333 57889999999999999999999999999999988999
Q ss_pred eeeeecccccCcceecccCCCCcccCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhh
Q 010774 411 LTQGYGLTESCSGCFTSLADVFNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (501)
Q Consensus 411 l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~ 489 (501)
++++||+||++++++...... ..++++|+|+ |+++++|+|+++..... ..+.|||+++||++|.|||++|+.|++.
T Consensus 489 i~~gYGlTEt~~~~~~~~~~~-~~~gsvG~p~~pg~e~ki~d~~~~~~~~--~~~~GEl~vrGp~v~~GY~~~pe~T~~~ 565 (746)
T PTZ00342 489 YYQGYGLTETTGPIFVQHADD-NNTESIGGPISPNTKYKVRTWETYKATD--TLPKGELLIKSDSIFSGYFLEKEQTKNA 565 (746)
T ss_pred EEEeeccCcccceeeeccCCC-CCcccccCcCCCcEEEEEecccccccCC--CCCceEEEEecCcccccccCChhhhhhh
Confidence 999999999987766554433 4559999998 99999999844433222 2257999999999999999999999999
Q ss_pred h-ccCcccCCCCC
Q 010774 490 I-VDGWFHTEVHR 501 (501)
Q Consensus 490 ~-~dgw~~TGD~~ 501 (501)
| .||||+|||.+
T Consensus 566 f~~dGW~~TGDig 578 (746)
T PTZ00342 566 FTEDGYFKTGDIV 578 (746)
T ss_pred cCcCCcccCCcEE
Confidence 9 69999999963
No 7
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=4e-63 Score=499.74 Aligned_cols=433 Identities=32% Similarity=0.582 Sum_probs=351.0
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++...+.++++.+|+.+++... . .+.++.+||+|+.+++.++|++|++.|+..||+|+|++.|+++|+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~a~~~~---~--~~~~~~~ty~e~~~~v~~~a~gL~~lg~~~gdrvai~a~nr~eW~i~d~ 88 (613)
T COG1022 14 EIHTLPKRLAERVKDRPDGVALMYK---E--LGGWEAITYRELYERVRALASGLLSLGIPAGDRVAIFAANRPEWAIADL 88 (613)
T ss_pred hcccHHHHHHHHhhcCCcceeEeee---c--CCcceEeeHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 4478999999999999998888865 3 5677899999999999999999999999779999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecC----CChhhHHHhhh-cC
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFAN----VSSSQKKEAEE-LG 195 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~----~~~~~~~~~~~-~~ 195 (501)
||+.+|++.+|+.+..+++++.++|+.+++++||++..............+..+.......+ .........+. ..
T Consensus 89 a~~~~g~v~Vp~y~t~~~~~~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (613)
T COG1022 89 AILALGAVSVPIYSTSTPEQLAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKALVLEVFPD 168 (613)
T ss_pred HHHHcCCeEEecCCCCCHHHHHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhhcccccccc
Confidence 99999999999999999999999999999999999996554443433332221111111111 00000000000 00
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecccc-CCCCcEEEEecC
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSFLP 274 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~-~~~~d~~l~~~p 274 (501)
.....+ ............+..+++++.|+|||||||.||||++||+|+++++..+...+ . ...+|+.++++|
T Consensus 169 ~~~~~~--~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~-----~~~~~~d~~LsfLP 241 (613)
T COG1022 169 EGISLF--LIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVL-----PPIGPGDRVLSFLP 241 (613)
T ss_pred ccchhh--hhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhC-----CCCCCCcEEEEeCc
Confidence 011111 11111122223456789999999999999999999999999999999988776 5 789999999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 275 LAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
+.|++..++.+.....++..++...++..++..++++|||+++++|.+|+.+.+...++....+...+++++|+.+.+..
T Consensus 242 laHi~Er~~~~~~~~~~g~~~~~~~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~a~~~~~~ 321 (613)
T COG1022 242 LAHIFERAFEGGLALYGGVTVLFKEDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRWALKVAYK 321 (613)
T ss_pred HHHHHHHHHHHHHHhhcceEEEecCCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHH
Confidence 99999998744433444444445569999999999999999999999999999999999999999999999999987654
Q ss_pred h----hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC
Q 010774 355 N----MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (501)
Q Consensus 355 ~----~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~ 430 (501)
. +..+. +....-..+++.|+++++.+|+++|++++||+++++++...|+.. |+++.++||+||++++++..+++
T Consensus 322 ~~~~~~~~~~-~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-Gi~i~eGYGlTEts~~~~v~~~~ 399 (613)
T COG1022 322 KISRALLGGG-PLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-GIPILEGYGLTETSAVVSVNPPD 399 (613)
T ss_pred HHHhhhcccC-CcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-CCCeEEEecccccccceEEcccc
Confidence 2 22221 222223378899999999999999999999999999999999987 89999999999999999988776
Q ss_pred CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCCC
Q 010774 431 VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVHR 501 (501)
Q Consensus 431 ~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~~ 501 (501)
.... +++|+|+|+++++|+| .|||+||||+||.|||++|+.|+++| .||||+|||.+
T Consensus 400 ~~~~-gtvG~p~p~~evKI~d-------------~GEilVRG~~Vm~GYyk~pe~Taeaf~~DGWf~TGDlg 457 (613)
T COG1022 400 RFVL-GTVGKPLPGIEVKIAD-------------DGEILVRGPNVMKGYYKNPEATAEAFTEDGWFRTGDLG 457 (613)
T ss_pred Cccc-CCcCCcCCCceEEEcc-------------CceEEEecchhcchhcCChHHHhhhccccCCcccCcee
Confidence 6555 9999999999999998 49999999999999999999999999 69999999964
No 8
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.7e-61 Score=459.26 Aligned_cols=487 Identities=35% Similarity=0.611 Sum_probs=416.3
Q ss_pred CCccceeeecCCCCCCCCCCCCCCcccccccCCCCCCCC-CCCCCHHHHHHHHHHhCCCCcceEEeecc--------CCC
Q 010774 1 MSETYTVKVEEARPAADGKPSGGPVYRCIYAKDGLLESP-AGLESPWQFFCDSAKRIPNNQMLGGRKVS--------DGK 71 (501)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~tl~~~l~~~a~~~p~~~al~~~~~~--------~~~ 71 (501)
|...|.|+..+.-.+ .|+.+||++...+++.+.+ ....|+.+++.+.+++++++.++-.+++. |++
T Consensus 3 ~~~~~~V~~~~~~n~-----~e~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~g~~~~mGtR~li~~h~ek~~dGK 77 (678)
T KOG1180|consen 3 MEKKYRVKAKPAANE-----HETAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKFGKKDAMGTRELIKEHEEKQVDGK 77 (678)
T ss_pred cchhcccccCCCCCC-----CCCccccccccCCCccCCCCCCcccHHHHHHHHHHhcCCCccccHHHHHHHHhhccCCCe
Confidence 567788888877544 7899999998777666665 67889999999999999999998655321 221
Q ss_pred ------CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCE-EEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHH
Q 010774 72 ------VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDR-CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFI 144 (501)
Q Consensus 72 ------~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~-V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~ 144 (501)
-+++.++||.|+..++..+|++|.+.|++++++ ++|+++.+.+|+++++||++.+.+++-+..++..+.+.+-
T Consensus 78 ~f~k~~Lg~Y~w~sy~ev~~~~~~~gsGL~~lG~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeeal~hs 157 (678)
T KOG1180|consen 78 TFEKYELGDYKWMSYNEVYERVHNFGSGLVKLGLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEALIHS 157 (678)
T ss_pred EEEEEeccceeeecHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhhhhhh
Confidence 245678999999999999999999999997777 9999999999999999999999999999999999999999
Q ss_pred HHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHh----hhcCceEeeHHHHHhcCC-CCCCCCCCCC
Q 010774 145 INHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEA----EELGVSCFSWEEFLQLGT-LDCELPPKKK 219 (501)
Q Consensus 145 l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 219 (501)
|..++++.+|++.+.++.+..... ....++.+|.+++.+....... ....+.+++++++.+.+. ...++.+..+
T Consensus 158 l~Et~~~~i~T~~~LL~kl~~~l~-~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v~~lG~~~~~~~~~P~p 236 (678)
T KOG1180|consen 158 LNETESTAIFTDSELLPKLKAPLK-QAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDVEKLGKENEIPPHPPKP 236 (678)
T ss_pred hccccceEEEeCHHHHHHHHHHHh-ccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHHHhhCCcCCCCCCCCCC
Confidence 999999999999999886655443 4478899999986443222221 123578999999998883 3233444478
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC
Q 010774 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 299 (501)
Q Consensus 220 ~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~ 299 (501)
+|+|+|+|||||||.||||+++|+|+++.+....... ..+...|+++..+||.|++-+.+-+.+++.|+.+-..+.
T Consensus 237 ~Dia~IMYTSGSTG~PKGVml~H~NiVA~~~G~~~~v----~~lg~~D~yi~yLPLAHIlEl~aE~~~ft~G~~iGY~S~ 312 (678)
T KOG1180|consen 237 SDIACIMYTSGSTGLPKGVMLTHSNIVAGVTGVGENV----PELGPKDRYIAYLPLAHILELTAELVCFTWGGRIGYSSP 312 (678)
T ss_pred CceEEEEEcCCCCCCCceEEEecccHHhhhhhhcccC----cccCCCceEEEechHHHHHHHHHHHHHHhhCCEeecCCc
Confidence 9999999999999999999999999999998865543 268899999999999999999999999999999976543
Q ss_pred ------C---HHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHH
Q 010774 300 ------D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLD 370 (501)
Q Consensus 300 ------~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (501)
+ -...-..+..+|||+|.++|++++++-+....++.+.+.+.+.+|..++.+|+..+++. ....+.++
T Consensus 313 ~TLtdts~ki~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~---g~~s~~ld 389 (678)
T KOG1180|consen 313 LTLTDTSSKIKKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERN---GPGSPLLD 389 (678)
T ss_pred ceecccchhhccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhcc---CCchhhHH
Confidence 1 12222346789999999999999999999999999999999999999999999998831 23478899
Q ss_pred HHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEe
Q 010774 371 SLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLE 450 (501)
Q Consensus 371 ~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~ 450 (501)
.+.|+++|..+|++||++++||+|++++..+.+.-.+.+++.++||.||+|+..+...+++..- |.+|.|++.++++++
T Consensus 390 ~lVFkKIr~~lGG~lR~~LsGGapLS~dtQrF~nic~C~Pv~qGYGLTEtca~~tv~e~~d~~~-g~vG~pl~c~eiKLv 468 (678)
T KOG1180|consen 390 ALVFKKIRALLGGNLRYILSGGAPLSPDTQRFMNICFCCPVLQGYGLTETCAAATVLEPEDFST-GRVGAPLPCCEIKLV 468 (678)
T ss_pred HHHHHHHHHHhCCceEEEEeCCCCCCHHHHHHHHHhccccccccccccchhcccEecChhhccc-ccccCCccceEEEEE
Confidence 9999999999999999999999999999999999999999999999999999888776665544 899999999999999
Q ss_pred ecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh--ccC--cccCCCCC
Q 010774 451 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDG--WFHTEVHR 501 (501)
Q Consensus 451 d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~--~dg--w~~TGD~~ 501 (501)
|++|+...+.+..+.||||++|+++..||++|++.|++.| +|| ||+|||-+
T Consensus 469 dw~EgGY~~~~~PPrGEI~i~G~~vt~gY~kn~ekT~e~ft~~~G~~WF~TGDIG 523 (678)
T KOG1180|consen 469 DWEEGGYFAKNKPPRGEILIGGPNVTMGYYKNEEKTKEDFTVEDGQRWFRTGDIG 523 (678)
T ss_pred EhhhcCccCCCCCCCceEEecCCccChhhhCChhhhhhhceecCCcEEEeccccc
Confidence 9999998887766789999999999999999999999999 499 99999964
No 9
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=8.6e-60 Score=502.02 Aligned_cols=475 Identities=33% Similarity=0.551 Sum_probs=373.6
Q ss_pred CCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeecc--------CC------CCCccEEeeHHHHHHH
Q 010774 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVS--------DG------KVGPYVWLTYQEVYDA 86 (501)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~--------~~------~~~~~~~~Ty~el~~~ 86 (501)
.+..+||+...+...........|+.++|.++++.+|+++|+.+.+.. ++ ..+.++.+||+||.++
T Consensus 36 ~~~~~~r~~~~~~~~~~~~~~~~t~~~l~~~~~~~~pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~ 115 (696)
T PLN02387 36 EPGYAIRNARFPELVETPWEGATTLAALFEQSCKKYSDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFER 115 (696)
T ss_pred CCCCceecCccccccccCCCCCCCHHHHHHHHHHHCCCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHH
Confidence 344469988865333322356689999999999999999999543100 11 1145567999999999
Q ss_pred HHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhc
Q 010774 87 AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 166 (501)
Q Consensus 87 v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~ 166 (501)
++++|++|.++|+++||+|+|+++|++||++++|||+++|++++|+++.++.+++.++|+.++++++|++.+....+...
T Consensus 116 v~~lA~~L~~lG~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~li~~~~~~~~l~~~ 195 (696)
T PLN02387 116 VCNFASGLVALGHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTTVICDSKQLKKLIDI 195 (696)
T ss_pred HHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCEEEECHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999987766665443
Q ss_pred CccCCCCccEEEEecCCChhhHHH-hhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHH
Q 010774 167 LPRCCLYLKTIVSFANVSSSQKKE-AEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA 244 (501)
Q Consensus 167 ~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~ 244 (501)
.. ....++.++.+++........ .......+..++++..... .........++++++|+|||||||.||||++||++
T Consensus 196 ~~-~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PKGV~lth~~ 274 (696)
T PLN02387 196 SS-QLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPKGVMMTHGN 274 (696)
T ss_pred hh-ccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCCEEEEEcHH
Confidence 32 335677788776543211100 0112345667888775542 12222334679999999999999999999999999
Q ss_pred HHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC----C-----HHHHHHHHhhhcCcE
Q 010774 245 IVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----D-----VRYLMEDIQELKPTM 315 (501)
Q Consensus 245 l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~----~-----~~~~~~~i~~~~~t~ 315 (501)
++..+..+...+ ..+..+|++++.+|++|++++...+.++..|+++.+... + +..++..++++++|+
T Consensus 275 l~~~~~~~~~~~----~~~~~~d~~l~~lPl~Hi~~~~~~~~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~~~pT~ 350 (696)
T PLN02387 275 IVATVAGVMTVV----PKLGKNDVYLAYLPLAHILELAAESVMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASALKPTL 350 (696)
T ss_pred HHHHHHHHHhhc----CCCCCCCEEEEECcHHHHHHHHHHHHHHHhCCEEEECChhhhcccccccccCchhhHHHhCCcE
Confidence 998887754432 146788999999999999999876667888888765322 1 234567899999999
Q ss_pred EEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC--CCCcchhHHHHHHHHHHHHhCCceeEEEEecC
Q 010774 316 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP--QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA 393 (501)
Q Consensus 316 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~ 393 (501)
++++|.+++++.+.........+.+.+.+++++...++..+...+. .......++.+.+++++..+|+++|.+++||+
T Consensus 351 ~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i~~GGa 430 (696)
T PLN02387 351 MTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFMLSGGA 430 (696)
T ss_pred EEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEEEEcCC
Confidence 9999999999999888888888889999999999888776643211 12345677889999999999999999999999
Q ss_pred CCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCC-CCCCCceEEEec
Q 010774 394 PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRG 472 (501)
Q Consensus 394 ~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~-~~~~~Gei~v~g 472 (501)
++++++.+.++..+|+.++++||+||++++++....+. ...+++|+|+|+++++|+|+++++.... ..++.|||+|+|
T Consensus 431 pl~~~~~~~~~~~~g~~v~~~YG~TEt~~~~~~~~~~~-~~~gsvG~p~p~~evkivd~~~~~~~~~~~~~p~GEi~vrG 509 (696)
T PLN02387 431 PLSGDTQRFINICLGAPIGQGYGLTETCAGATFSEWDD-TSVGRVGPPLPCCYVKLVSWEEGGYLISDKPMPRGEIVIGG 509 (696)
T ss_pred CCCHHHHHHHHHHcCCCeeEeechhhcccceeecCccc-CCCCccCCCCCceEEEEeeccccCcccCCCCCCCceEEecc
Confidence 99999988888778999999999999988776654433 3458999999999999999555543322 223579999999
Q ss_pred CCccccccCCcccchhhh---ccC--cccCCCCC
Q 010774 473 NTLFSGYYKRPDLTEEVI---VDG--WFHTEVHR 501 (501)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~---~dg--w~~TGD~~ 501 (501)
|++|.|||++|+.|++.| .|| ||+|||.+
T Consensus 510 p~v~~GY~~~pe~T~~~f~~d~~G~~W~~TGDig 543 (696)
T PLN02387 510 PSVTLGYFKNQEKTDEVYKVDERGMRWFYTGDIG 543 (696)
T ss_pred CcccchhcCCHHHHhhhhccccCCCceeecCceE
Confidence 999999999999999988 245 99999953
No 10
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.7e-59 Score=495.93 Aligned_cols=481 Identities=30% Similarity=0.503 Sum_probs=372.2
Q ss_pred ccceeeecCCCCCCCCCCCCCCcccccccCC----CCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeecc----------
Q 010774 3 ETYTVKVEEARPAADGKPSGGPVYRCIYAKD----GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVS---------- 68 (501)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~---------- 68 (501)
+.|+++++ .+.++..++++|.....+ .+....+...|+.++|.++++.+|+++|+.+.+..
T Consensus 30 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~~~~~p~~~a~~~r~~~~~~~~~~~~~ 104 (700)
T PTZ00216 30 GPQNVPVP-----GTETENASAIYRIAGVTDEEHERLRNEWYYGPNFLQRLERICKERGDRRALAYRPVERVEKEVVKDA 104 (700)
T ss_pred CCcceecC-----CCCCCCCCCcccCcccccchhcccccccCCCCCHHHHHHHHHHhCCCCCeEEEeccccccccccccC
Confidence 34556654 234456677888765443 22222245679999999999999999999885100
Q ss_pred CCC--------CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHH
Q 010774 69 DGK--------VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANA 140 (501)
Q Consensus 69 ~~~--------~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~ 140 (501)
++. .+..+.+||+||.++++++|++|.++|+++||+|+|+++|++++++++|||+++|++++|+++.++.++
T Consensus 105 ~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~ 184 (700)
T PTZ00216 105 DGKERTMEVTHFNETRYITYAELWERIVNFGRGLAELGLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDA 184 (700)
T ss_pred CCccccccccccCCceEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHH
Confidence 010 024579999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC---CC-CCCCC
Q 010774 141 VEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT---LD-CELPP 216 (501)
Q Consensus 141 l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~ 216 (501)
+.++|+.++++++|++......+.............++.++..... .........++++++.... .. ....+
T Consensus 185 l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~~~~~ii~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (700)
T PTZ00216 185 LAYALRETECKAIVCNGKNVPNLLRLMKSGGMPNTTIIYLDSLPAS----VDTEGCRLVAWTDVVAKGHSAGSHHPLNIP 260 (700)
T ss_pred HHhhhhccCccEEEECHHHHHHHHHhhhhccCCceEEEEECCCccc----cccCCceEEEHHHHHHhCCccccccccCCC
Confidence 9999999999999998765544433332211112245555432211 1112345677888876541 11 11233
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010774 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (501)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~ 296 (501)
..++++++|+|||||||.||||++||+++++.+..+...+.........+|++++.+|++|++++......++.|+++.+
T Consensus 261 ~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~~~~~l~~G~~v~~ 340 (700)
T PTZ00216 261 ENNDDLALIMYTSGTTGDPKGVMHTHGSLTAGILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGVTNIFLARGALIGF 340 (700)
T ss_pred CCcccEEEEEEeCCCCCcCcEEEEEhHHHHHHHHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHHHHHHHHcCCEEEE
Confidence 46789999999999999999999999999988876544321111123678999999999999998776667888888766
Q ss_pred ecCCHHHHHH-------HHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhH
Q 010774 297 WRGDVRYLME-------DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLL 369 (501)
Q Consensus 297 ~~~~~~~~~~-------~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (501)
. ++..+.+ .++++++|++.++|.+++.+.+.........+.+.+.+++++...++..+..+. ..+..
T Consensus 341 ~--~~~~l~~~~~~~~~~l~~~~pT~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~----~~~~~ 414 (700)
T PTZ00216 341 G--SPRTLTDTFARPHGDLTEFRPVFLIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGK----DTPYW 414 (700)
T ss_pred C--CHHHhhhhhccccchHHHcCCcEEEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCC----CCchH
Confidence 3 4555554 688999999999999999999998888888888999999999988887776542 24567
Q ss_pred HHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEE
Q 010774 370 DSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARL 449 (501)
Q Consensus 370 ~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I 449 (501)
+.+.+++++..+++++|.+++||+++++++.++++..++ .+++.||+||++++++...... ...+++|+|+||++++|
T Consensus 415 ~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~~~~~~~~~~-~l~~~YG~TEt~~~~~~~~~~~-~~~~svG~p~~g~evkI 492 (700)
T PTZ00216 415 NEKVFSAPRAVLGGRVRAMLSGGGPLSAATQEFVNVVFG-MVIQGWGLTETVCCGGIQRTGD-LEPNAVGQLLKGVEMKL 492 (700)
T ss_pred HHHHHHHHHHHhCCcEEEEEECCCCCCHHHHHHHHHHhh-hHhhccCcccccccccccCCCC-CCCCCcCCcCCCeEEEE
Confidence 888899999999999999999999999999988888778 9999999999987766554432 34589999999999999
Q ss_pred eecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCCC
Q 010774 450 ESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVHR 501 (501)
Q Consensus 450 ~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~~ 501 (501)
+| +++.......++.|||+|+|++++.|||++|+.|++.| .||||+|||.+
T Consensus 493 ~d-~~~~~~~~~~~~~GEL~vrG~~v~~GY~~~pe~T~~~f~~dGw~~TGDig 544 (700)
T PTZ00216 493 LD-TEEYKHTDTPEPRGEILLRGPFLFKGYYKQEELTREVLDEDGWFHTGDVG 544 (700)
T ss_pred ee-chhhccCCCCCCCceEEEcCCcccchhcCChhHhhhhccccCCeeccceE
Confidence 99 55432222233689999999999999999999999999 79999999953
No 11
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=3.1e-58 Score=430.10 Aligned_cols=401 Identities=22% Similarity=0.323 Sum_probs=341.3
Q ss_pred cCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC
Q 010774 31 AKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS 110 (501)
Q Consensus 31 ~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~ 110 (501)
.-++-...|-...|+.+.++-.+++.||+.|+++. ..+ .+.||+|+...++.+|++|.++|+++||||++..|
T Consensus 38 ~~~g~~~ipl~~~Tigq~l~~~t~~v~dkea~Vf~---~eg----~R~Tf~~~~~ev~slAaGll~lGL~kGDrVgvwgp 110 (596)
T KOG1177|consen 38 YVHGCSQIPLDSETIGQLLETTTERVPDKEAAVFD---HEG----IRLTFSEFVSEVESLAAGLLSLGLKKGDRVGVWGP 110 (596)
T ss_pred ccCCCCCCCcccccHHHHHHHHhhccCcceEEEEe---ecc----chhhHHHHHHHHHHHHhhHHhhcCCCCCEEEEecC
Confidence 44566667788899999999999999999999986 222 46999999999999999999999999999999999
Q ss_pred CchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhh-----hhh------------cCccCCCC
Q 010774 111 NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS-----ILS------------CLPRCCLY 173 (501)
Q Consensus 111 n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~-----~~~------------~~~~~~~~ 173 (501)
|+.+|+..+|||+++|.+.+++||++..+++++.|++.+++++|+....... +.+ ...+.++.
T Consensus 111 N~~~w~l~~lA~A~AG~v~v~~NP~Yq~~elr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~ 190 (596)
T KOG1177|consen 111 NSYEWVLCQLACARAGLVLVNLNPAYQSEELRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPE 190 (596)
T ss_pred ChHHHHHHHHHHHHhceEEeccCcccccHHHHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCcccccccccc
Confidence 9999999999999999999999999999999999999999999998743221 211 12234455
Q ss_pred ccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCC------CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHH
Q 010774 174 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLD------CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA 247 (501)
Q Consensus 174 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~ 247 (501)
+..++..++... -.+...+.|++.....+ .......+|+++.|.|||||||.|||+.+||.++++
T Consensus 191 lthvi~~~ed~~---------~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~N 261 (596)
T KOG1177|consen 191 LTHVILADEDHP---------LPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLN 261 (596)
T ss_pred ceEEEecCCCCc---------CCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhh
Confidence 666666663322 12356677777655221 112334679999999999999999999999999999
Q ss_pred HHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHH
Q 010774 248 EVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYD 324 (501)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~ 324 (501)
+.......+ ++..++++++..|++|.+|... ++++|..|++++++.. ++.+.+++|.++|||.++.+|+++.
T Consensus 262 na~~vg~r~-----g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~f~~k~alqai~~ekcT~l~gtPtM~~ 336 (596)
T KOG1177|consen 262 NARAVGARA-----GYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPSFDPKDALQAISNEKCTTLYGTPTMFV 336 (596)
T ss_pred hHHHHHHHh-----CcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCCCChHHHHHHHHhhceEEEecChHHHH
Confidence 999988777 8888999999999999999765 8999999999999764 9999999999999999999999999
Q ss_pred HHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH
Q 010774 325 RIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR 404 (501)
Q Consensus 325 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~ 404 (501)
.+++ .+....++++ ++|..+.||+++++++++.+.
T Consensus 337 Dlln-------------------------------------~~~~~~~~~s--------~lr~~vigGa~~s~eLlk~iv 371 (596)
T KOG1177|consen 337 DLLN-------------------------------------IPQKQQVDLS--------SLRKGVIGGAPVSPELLKLIV 371 (596)
T ss_pred HHhc-------------------------------------chhhccCchh--------hhhhheeCCCCCCHHHHHHHH
Confidence 9986 4555566666 889999999999999999999
Q ss_pred HhhCCC-eeeeecccccCcceecccCCC--CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccC
Q 010774 405 VTSGAP-LTQGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYK 481 (501)
Q Consensus 405 ~~~~~~-l~~~yG~tE~~~~~~~~~~~~--~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~ 481 (501)
+..++. +..+||+||++.+.+....++ .+...|+|..+++.+..|+| .+|...|.+ ..||||+||.+++.|||+
T Consensus 372 ~~~~m~~i~v~YG~TEts~v~~~~~~~D~~~~~~ksVG~~m~h~Ea~iv~-~~g~~v~~~--~~Gel~iRGY~tMl~Ywg 448 (596)
T KOG1177|consen 372 NQMNMKDIAVAYGLTETSPVLFMSLLGDPPEERIKSVGHLMDHYEAAIVD-KDGSEVPLG--TKGELLIRGYSTMLGYWG 448 (596)
T ss_pred HhhCceeeEEEeeccccCcceeeecCCCCHHHHHhhhhhccccccccccc-CCCCccccC--CCceEEEEechhheeecC
Confidence 977764 778999999999888776665 34568999999999999999 999988888 679999999999999999
Q ss_pred Ccccchhhh-ccCcccCCCC
Q 010774 482 RPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 482 ~~~~~~~~~-~dgw~~TGD~ 500 (501)
+++.|.++. .|.||+|||-
T Consensus 449 ~~~kT~eti~~drW~~TGDi 468 (596)
T KOG1177|consen 449 EEEKTKETIGNDRWYDTGDI 468 (596)
T ss_pred CcccchhhcccccceecCce
Confidence 999999988 8899999995
No 12
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=1.6e-57 Score=455.67 Aligned_cols=390 Identities=28% Similarity=0.406 Sum_probs=315.5
Q ss_pred HHHHHHHHhCCCC-cceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCC--CCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 47 QFFCDSAKRIPNN-QMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRG--VNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 47 ~~l~~~a~~~p~~-~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~g--v~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
-.+.+.+..++++ +.+++. +.. + +.+||+|++.++.++|..|.++| +++||+|++++||+++++.+++||+
T Consensus 20 ~~l~~~~~~~~~~~~~~i~~---~~~-g--~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~~~~~la~~ 93 (537)
T KOG1176|consen 20 TFLGRPAFVYLDRNTSLVYQ---DSD-G--RELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEFVELALAVP 93 (537)
T ss_pred ccccccccccccCcceEEEe---cCC-C--cEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3344444455555 777766 321 1 58999999999999999999875 8999999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHH
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (501)
.+|+++.++||.+.+.++...++.++++++|++....+.+.+...... ..++.+......... .........+..
T Consensus 94 ~~Ga~~~~~Np~~~~~ei~~~~~~s~~kiif~d~~~~~~i~~~~~~~~---~~i~~l~~~~~~~~~--~~~~~~~~~~~~ 168 (537)
T KOG1176|consen 94 MAGAVLNPLNPRLTASEIAKQLKDSKPKLIFVDEDFYDKISEATSKLA---LKIIVLTGDEGVISI--SDLVEDLDAFED 168 (537)
T ss_pred HcCccccccCcccCHHHHHHHHHhcCCeEEEEcCchHHHHHHHHhhcC---CceEEEecccCcccc--ccccccccchhh
Confidence 999999999999999999999999999999999999988866554332 344444332110000 000000111444
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH
Q 010774 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (501)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 283 (501)
+........ ..+.+.++++.+.|||||||.||||++||++++.......... .+...|+.++.+|++|.+|+..
T Consensus 169 ~~~~~~~~~-~~~~~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~-----~~~~~~v~l~~lPl~H~~Gl~~ 242 (537)
T KOG1176|consen 169 LMPEGLPDG-IRPVSEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGW-----ELTSDDVYLCTLPLFHIYGLIT 242 (537)
T ss_pred ccccCCCcc-cccCCCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcc-----cCCCCceEEEechHHHHhHHHH
Confidence 433332222 4556779999999999999999999999999999987755544 6667999999999999999998
Q ss_pred HHH-HHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC
Q 010774 284 ETH-CIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (501)
Q Consensus 284 ~~~-~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (501)
++. .+..|.++++.+. ++..+++.+++|++|+++++|.++..+++
T Consensus 243 ~~~~~~~~~~~ii~~~~f~~~~~~~~i~kykvt~~~~vP~~~~~l~~--------------------------------- 289 (537)
T KOG1176|consen 243 LLLSLLAGGTTIICLRKFDAELFLDLIEKYKVTHLFLVPPVLNMLAK--------------------------------- 289 (537)
T ss_pred HHHHHHhCCceEEECCCCCHHHHHHHHHHhCEEEEEcChHHHHHHhc---------------------------------
Confidence 666 5666666666665 99999999999999999999999999986
Q ss_pred CCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC-CCeeeeecccccCcceecccCCCCcccCcccc
Q 010774 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFNMIGTVGV 440 (501)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~ 440 (501)
.+...+++++ ++|.+.+||++++++..++++++++ ..+.++||+||++++++........+++|+|+
T Consensus 290 ----~p~~~~~~l~--------sl~~v~~gga~~~~~~~~~~~~~l~~~~v~q~YGmTE~~~~~~~~~~~~e~k~~svG~ 357 (537)
T KOG1176|consen 290 ----SPIVKKYDLS--------SLRSVLSGGAPLSPATLEKVKERLPNVTVIQGYGMTEAGGLITSNDWGPERKPGSVGR 357 (537)
T ss_pred ----CCccCcccCC--------ccEEEEecCCCCCHHHHHHHHHhCCCceEEEeeccccccCceeecCCCccCcccccCc
Confidence 4455666665 9999999999999999999999998 88999999999998777766555467799999
Q ss_pred cccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhcc-CcccCCCCC
Q 010774 441 PMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTEVHR 501 (501)
Q Consensus 441 p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~d-gw~~TGD~~ 501 (501)
++++++++|.+ ++|..++.+ +.||||+||++++.|||+||+.|++.|.+ |||||||.+
T Consensus 358 ~~~g~~~~v~~-e~g~~l~~~--~~GEI~vrg~~imkGY~~NpeaT~~~~~~~GW~~TGDiG 416 (537)
T KOG1176|consen 358 LLPGVRVKVLD-ETGVSLGPN--QTGEICVRGPQVMKGYLKNPEATKEAFDDDGWFHTGDLG 416 (537)
T ss_pred cccceEEEeeC-CCCCCCCCC--CceEEEEECcccchhhcCChHHHHhhcccCCccccCceE
Confidence 99999999999 888877776 89999999999999999999999999954 999999953
No 13
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.6e-56 Score=460.85 Aligned_cols=391 Identities=28% Similarity=0.420 Sum_probs=318.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|.++++.+|+++|+++. +.. + ++||+||.++++++|++|++.|+++||+|+|+++|++++++++
T Consensus 8 ~~~~~~~~~l~~~a~~~~~~~a~~~~---~~~-~---~~Ty~el~~~~~~~A~~L~~~~v~~gdrVail~~N~~e~~~~~ 80 (534)
T COG0318 8 TAELTLASLLERAARRNPDRPALIFL---GRG-G---RLTYRELDRRANRLAAALQALGVKPGDRVAILLPNSPEFLIAF 80 (534)
T ss_pred cccccHHHHHHHHHHhCCCceEEEEc---CCC-c---eeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45578999999999999999999987 432 1 5999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++|+||.+..+++.++++.++++.++++.+..+......... .....+.......... . .
T Consensus 81 ~a~~~~Gav~vpln~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~---------~-~ 149 (534)
T COG0318 81 LAALRAGAVAVPLNPRLTPRELAYILNDAGAKVLITSAEFAALLEAVAEAL-PVVLVVLLVGDADDRL---------P-I 149 (534)
T ss_pred HHHHhcCEEEeecCcccCHHHHHHHHHhcCCeEEEEcccchhHHHHHhccC-CcceEEEecccccccc---------c-c
Confidence 999999999999999999999999999999999999988444333322221 2222222222211100 0 2
Q ss_pred eHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecccc--CCCCcEEEEecChH
Q 010774 200 SWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV--CSEEDTYFSFLPLA 276 (501)
Q Consensus 200 ~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~--~~~~d~~l~~~pl~ 276 (501)
.++++.... .........+++++++++|||||||.||||++||++++.+...+...+ . +...|++++.+|++
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~~~d~~l~~lPl~ 224 (534)
T COG0318 150 TLEALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAAL-----GGGLTPDDVVLSWLPLF 224 (534)
T ss_pred cHHHHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHh-----cccCCCCceEEEecChH
Confidence 344443322 111222225789999999999999999999999999999988876666 5 78999999999999
Q ss_pred HHHHHHH-HHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q 010774 277 HIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (501)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (501)
|.+|+.. ++.+++.|+++++.+ +++..++..+.++++|+++++|+++..++++.
T Consensus 225 H~~Gl~~~~~~~~~~G~~~v~~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~---------------------- 282 (534)
T COG0318 225 HIFGLIVGLLAPLLGGGTLVLLSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNP---------------------- 282 (534)
T ss_pred HHHHHHHHHHHHHHcCCEEEeCCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCC----------------------
Confidence 9999997 555699999999987 49999999999999999999999999987632
Q ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC-CCeeeeecccccCcceecccCCC
Q 010774 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADV 431 (501)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~l~~~yG~tE~~~~~~~~~~~~ 431 (501)
.....+++ +++|.++.||+++++++.++|++.|+ ..+++.||+||++.+++....+.
T Consensus 283 ---------------~~~~~~~~-------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~ 340 (534)
T COG0318 283 ---------------EKDDDDLS-------SSLRLVLSGGAPLPPELLERFEERFGPIAILEGYGLTETSPVVTINPPDD 340 (534)
T ss_pred ---------------ccCccccc-------cceEEEEecCCcCCHHHHHHHHHHhCCCceEEeecccccCceeecCCCch
Confidence 12222221 13999999999999999999999997 47999999999998877776665
Q ss_pred -CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhcc-CcccCCCC
Q 010774 432 -FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTEVH 500 (501)
Q Consensus 432 -~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~d-gw~~TGD~ 500 (501)
....+++|+|+||++++|+| +++....+ +++|||||+||+++.|||++|+.|++.|.+ |||+|||-
T Consensus 341 ~~~~~~~~G~~~pg~~v~Ivd-~~~~~~~p--g~vGei~irgp~v~~GY~~~pe~t~~~f~~~gW~~TGDl 408 (534)
T COG0318 341 LLAKPGSVGRPLPGVEVRIVD-PDGGEVLP--GEVGEIWVRGPNVMKGYWNRPEATAEAFDEDGWLRTGDL 408 (534)
T ss_pred hhhcCCcccccCCCcEEEEEe-CCCCccCC--CCceEEEEECchhhhhhcCChHHHHHhhccCCeeeecce
Confidence 33568889999999999999 77753333 489999999999999999999999998865 99999995
No 14
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=8e-56 Score=441.02 Aligned_cols=378 Identities=21% Similarity=0.246 Sum_probs=314.2
Q ss_pred HHHHHHHh-CCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHHhc
Q 010774 48 FFCDSAKR-IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQ 125 (501)
Q Consensus 48 ~l~~~a~~-~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 125 (501)
.++++... .+++.|+++. +..++. +.+||+||++.++++|+.|++ .|+ +||||++++|+.+|.++++|||+++
T Consensus 14 ~~dr~~~~~~~~~~aii~~---~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~gv-kGDrV~iymp~~pe~~~a~LA~~ri 88 (528)
T COG0365 14 ALDRHLEADRPDDTAIIFD---GEDGLF-RELTYGDLRREVARLANALKDLGGV-KGDRVAIYMPNSPEAVIALLATARI 88 (528)
T ss_pred hhhhhhhccCCCceEEEEE---cCCCCc-eEEEHHHHHHHHHHHHHHHHHhCCC-CCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 47777763 5789999997 444334 899999999999999999987 578 9999999999999999999999999
Q ss_pred CCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC--CCCccEEEEecCCChhhHHHhhhcCceEeeHHH
Q 010774 126 AITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC--CLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (501)
Q Consensus 126 G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (501)
|++.+|+.+.++++++...++.++++++|+.+............. ...+..++++.... ..|++
T Consensus 89 GAI~~~vf~~f~~~al~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~--------------~~~~~ 154 (528)
T COG0365 89 GAIPAVVSPGLSAEAVADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLG--------------LWYDE 154 (528)
T ss_pred CCEEeecccCCCHHHHHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEecccc--------------ccHHH
Confidence 999999999999999999999999999999987665432111100 00000133333221 56778
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcce-eeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ-MFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~-~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
+........+....+.+++++|+|||||||.||||+|+|+.++........ .+ .+..+|++++..++.|++|..
T Consensus 155 ~~~~~~~~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~-----~~~~~Dv~w~~ad~GW~~g~~ 229 (528)
T COG0365 155 AVEKASEKFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHG-----DLLPGDRFWNSSDPGWIYGLW 229 (528)
T ss_pred HhhccCCCCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhh-----CCCCCCEEEeCCCchhhhCch
Confidence 777665555566688999999999999999999999999987777665433 34 667999999999999999999
Q ss_pred H-HHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 283 I-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 283 ~-~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
. ++.+|..|+++++..+ ++..+++.++++++|.++++|+.++.|.+.
T Consensus 230 ~~v~~pL~~Gat~~~~eg~p~~~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~---------------------------- 281 (528)
T COG0365 230 YSVFSPLASGATTVLYDGRPFYSPERLWEALEKYKVTIFGTSPTFLRRLMKL---------------------------- 281 (528)
T ss_pred HHHHHHHhcCCeEEEeCCCCCCCHHHHHHHHHHhCCceEeeCHHHHHHHHhc----------------------------
Confidence 6 8999999999999875 389999999999999999999999999872
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s 437 (501)
...+++|++ +||.+.++|||++++..+++.+.+|++|.+.||+||+|++...... ..++++
T Consensus 282 ---------g~~~~~dls--------sLr~~~SaGEPLnpe~~~w~~~~~g~~i~d~~gqTEtg~~~~~~~~--~~~~g~ 342 (528)
T COG0365 282 ---------GLGEPYDLS--------SLRVLGSAGEPLNPEAFEWFYSALGVWILDIYGQTETGMGFIAGRP--PVKNGS 342 (528)
T ss_pred ---------CCcccccch--------hheeeeccCCCCCHHHHHHHHHHhCCCEeccccccccCccccCCCC--CcCCCC
Confidence 226677776 8999999999999999999999999999999999999966555444 333466
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecC--CccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~--~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.|+|+||+++.|+| ++|++++.+ + |+|+++.+ +++.+||+||+.+.+.+-+.||+|||.
T Consensus 343 ~g~p~pG~~~~vvd-d~g~~~~~~--~-G~Lvi~~~~p~~~~~~w~d~er~~~~y~~~~y~tGD~ 403 (528)
T COG0365 343 SGLPLPGYAVRRVD-DEGNPVPPG--V-GELVVRLPWPGMALTYWNDPERYKEAYFGRWYRTGDW 403 (528)
T ss_pred CCCCCCCceeEEEC-CCCCcCCCC--c-eEEEEeCCCchhhhhhhCCHHHHHHHHhhceeecCce
Confidence 69999999999999 888877766 6 99999987 999999999999988885559999995
No 15
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.6e-53 Score=451.13 Aligned_cols=407 Identities=16% Similarity=0.199 Sum_probs=305.9
Q ss_pred CCHHHHHHHHHHh--CCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 43 ESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 43 ~tl~~~l~~~a~~--~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
++..++|+++++. +|+++|+++. ...++..+.+||+||.++++++|+.|+++|+++||+|+++++|++++++++|
T Consensus 59 n~~~~~l~~~~~~~~~~~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GDrV~i~~~n~~e~~~~~l 135 (647)
T PTZ00237 59 NTCYNVLDIHVKNPLKRDQDALIYE---CPYLKKTIKLTYYQLYEKVCEFSRVLLNLNISKNDNVLIYMANTLEPLIAML 135 (647)
T ss_pred eHHHHHHHHhhcccCCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 4467778888764 7999999885 3333334789999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC---------hhhhhhcCccCCCCccEEEEecCCCh-hhHHH
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK---------IPSILSCLPRCCLYLKTIVSFANVSS-SQKKE 190 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~ 190 (501)
||+++|++++|+++.++.+++.++|+.++++++|+++.. .+.+.+...........++.+..... .....
T Consensus 136 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~ 215 (647)
T PTZ00237 136 SCARIGATHCVLFDGYSVKSLIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDITSESDL 215 (647)
T ss_pred HHHHhCcEEEeeCCCCCHHHHHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCccccccc
Confidence 999999999999999999999999999999999997632 11222221111011234444321110 00000
Q ss_pred ----hhhcCceEeeHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHH-HHHHHhhcceeeeecc
Q 010774 191 ----AEELGVSCFSWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQA-IVAEVLSVDQMFVVTG 260 (501)
Q Consensus 191 ----~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~-l~~~~~~~~~~~~~~~ 260 (501)
..........+++++... .........+++++++|+|||||||.||||+++|.+ +......+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~~~---- 291 (647)
T PTZ00237 216 KKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRSII---- 291 (647)
T ss_pred ccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHHhc----
Confidence 000001123466655421 111223345678999999999999999999999998 443333222222
Q ss_pred ccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCC-------HHHHHHHHhhhcCcEEEecchHHHHHHHHHHHH
Q 010774 261 KVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGD-------VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (501)
Q Consensus 261 ~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~-------~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 333 (501)
....++++++..|+.|+.+...++.+|+.|+++++.+.+ +..+++.++++++|+++++|++++.+++.....
T Consensus 292 -~~~~~d~~~~~~~~~w~~~~~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~ 370 (647)
T PTZ00237 292 -EKDIPTVVFSHSSIGWVSFHGFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDPEA 370 (647)
T ss_pred -CCCCCcEEEEcCCCceEeeHHHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCccc
Confidence 556789999999999987766788999999999997652 578999999999999999999999987621000
Q ss_pred hhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeee
Q 010774 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQ 413 (501)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~ 413 (501)
......++++ +||.+++||+++++++.+++++.+|+.+++
T Consensus 371 --------------------------------~~~~~~~~l~--------~Lr~i~~~G~~l~~~~~~~~~~~~g~~i~~ 410 (647)
T PTZ00237 371 --------------------------------TIIRSKYDLS--------NLKEIWCGGEVIEESIPEYIENKLKIKSSR 410 (647)
T ss_pred --------------------------------cccccccCcc--------hheEEEecCccCCHHHHHHHHHhcCCCEEe
Confidence 0001223333 899999999999999999999999999999
Q ss_pred eecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecC---CccccccCCcccchhhh
Q 010774 414 GYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVI 490 (501)
Q Consensus 414 ~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~---~v~~gY~~~~~~~~~~~ 490 (501)
.||+||++++++..........+++|+|+||++++|+| +++.+++.+ +.|||++++| +++.|||++++.+.+.|
T Consensus 411 ~yG~TE~~~~~~~~~~~~~~~~~s~G~p~~g~~~~i~d-~~g~~~~~g--e~GEl~v~~p~~p~~~~gy~~~~~~~~~~f 487 (647)
T PTZ00237 411 GYGQTEIGITYLYCYGHINIPYNATGVPSIFIKPSILS-EDGKELNVN--EIGEVAFKLPMPPSFATTFYKNDEKFKQLF 487 (647)
T ss_pred eechHHhChhhhccCCCCCCCCCCCccCcCCceEEEEC-CCCCCCCCC--CceEEEEeccCCchhhCceeCCHHHHHHHH
Confidence 99999998765443332223348999999999999999 888887765 8999999986 78999999999998877
Q ss_pred c--cCcccCCCC
Q 010774 491 V--DGWFHTEVH 500 (501)
Q Consensus 491 ~--dgw~~TGD~ 500 (501)
. +|||+|||.
T Consensus 488 ~~~~g~~~TGDl 499 (647)
T PTZ00237 488 SKFPGYYNSGDL 499 (647)
T ss_pred hCCCCEEECCcE
Confidence 3 799999996
No 16
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=4.8e-53 Score=448.89 Aligned_cols=407 Identities=16% Similarity=0.208 Sum_probs=309.9
Q ss_pred CCCCCH-HHHHHHHHH-hCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH
Q 010774 40 AGLESP-WQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (501)
Q Consensus 40 ~~~~tl-~~~l~~~a~-~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~ 117 (501)
....|+ .++|+++++ .+|+++|+++. ..+.+..+.+||+||.++++++|++|+++|+++||+|+++++|++++++
T Consensus 84 g~~~N~~~~~l~~~~~~~~~~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~pn~~e~v~ 160 (666)
T PLN02654 84 GGKTNICYNCLDRNVEAGNGDKIAIYWE---GNEPGFDASLTYSELLDRVCQLANYLKDVGVKKGDAVVIYLPMLMELPI 160 (666)
T ss_pred CCEeeHHHHHHHHhhccCCCCCEEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHH
Confidence 333444 567777776 48999999875 3333445789999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhh---------hhhcCccC---CCCccEEEEecCCCh
Q 010774 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS---------ILSCLPRC---CLYLKTIVSFANVSS 185 (501)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~---------~~~~~~~~---~~~~~~v~~~~~~~~ 185 (501)
++|||+++|++++|+++.++.+++..+++.++++++|+++..... +....... ......++.+.....
T Consensus 161 a~lA~~~~Gav~vpv~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (666)
T PLN02654 161 AMLACARIGAVHSVVFAGFSAESLAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQLA 240 (666)
T ss_pred HHHHHHHcCCEEEecCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEeccccc
Confidence 999999999999999999999999999999999999998764321 11111100 011122222222110
Q ss_pred hhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHH-hhcceeeeeccccCC
Q 010774 186 SQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV-LSVDQMFVVTGKVCS 264 (501)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~-~~~~~~~~~~~~~~~ 264 (501)
...............++++........+......+++++|+|||||||.||||+++|++++... ..+...+ ++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~-----~~~ 315 (666)
T PLN02654 241 MKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAF-----DYK 315 (666)
T ss_pred ccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhc-----CCC
Confidence 0000000000011234555433221222333567999999999999999999999999986543 3344444 778
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 265 ~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
.+|++++..|+.|.++... ++.+|+.|+++++.++ ++..+++.|+++++|+++++|++++.|.+..
T Consensus 316 ~~d~~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------- 387 (666)
T PLN02654 316 PTDVYWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDG-------- 387 (666)
T ss_pred CCcEEEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhC--------
Confidence 8999999999999999875 7889999999999863 7899999999999999999999999987631
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC---CCeeeee
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGY 415 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~l~~~y 415 (501)
.....+++++ +||.++++|+++++++.+++.+.+| +.+.+.|
T Consensus 388 ---------------------------~~~~~~~~l~--------~Lr~i~~~Ge~l~~~~~~~~~~~~g~~~~~i~~~y 432 (666)
T PLN02654 388 ---------------------------DEYVTRHSRK--------SLRVLGSVGEPINPSAWRWFFNVVGDSRCPISDTW 432 (666)
T ss_pred ---------------------------ccccccCChh--------heeEEEEecCCCCHHHHHHHHHHhCCCCCceeccc
Confidence 0112233343 8999999999999999999999887 6899999
Q ss_pred cccccCcceecccCCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec--CCccccccCCcccchhhh--
Q 010774 416 GLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI-- 490 (501)
Q Consensus 416 G~tE~~~~~~~~~~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~-- 490 (501)
|+||+++..+...... ...++++|+|+||++++|+| ++|++++.+ +.|||+|++ |+++.|||++++.+.+.+
T Consensus 433 g~TE~g~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~g~~~~~~--~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~ 509 (666)
T PLN02654 433 WQTETGGFMITPLPGAWPQKPGSATFPFFGVQPVIVD-EKGKEIEGE--CSGYLCVKKSWPGAFRTLYGDHERYETTYFK 509 (666)
T ss_pred cccccCCeeeccCCCCCCCCCCccCCCCCCceEEEEC-CCCCCCCCC--CceEEEEcCCCchhhhhhcCChHHHHHhhhh
Confidence 9999987665443322 34568999999999999999 888877654 789999999 789999999999887765
Q ss_pred -ccCcccCCCC
Q 010774 491 -VDGWFHTEVH 500 (501)
Q Consensus 491 -~dgw~~TGD~ 500 (501)
.+|||+|||.
T Consensus 510 ~~~g~~~TGD~ 520 (666)
T PLN02654 510 PFAGYYFSGDG 520 (666)
T ss_pred cCCCEEEeCce
Confidence 3899999996
No 17
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=1.9e-52 Score=441.83 Aligned_cols=386 Identities=19% Similarity=0.333 Sum_probs=300.9
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|+++++++|+++|+++. + ..+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 38 ~~~l~~~l~~~a~~~p~~~a~~~~---~-~~~~~~~~Ty~el~~~v~~~A~~L~~~Gv~~gd~Vai~~~n~~e~~~~~lA 113 (614)
T PRK08180 38 PRRLTDRLVHWAQEAPDRVFLAER---G-ADGGWRRLTYAEALERVRAIAQALLDRGLSAERPLMILSGNSIEHALLALA 113 (614)
T ss_pred CccHHHHHHHHHHHCCCCceeeec---c-CCCceeEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 468999999999999999999864 2 223346899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCC-----HHHHHHHHHhcCceEEEEcCCC-hhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 122 CNSQAITYVPLYDTLG-----ANAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~-----~~~l~~~l~~~~~~~vl~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
|+++|++++|++|.++ .+++.++++.++++++|+++.. .......... ... .++....... .
T Consensus 114 ~~~~Gav~vpl~~~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~---------~ 181 (614)
T PRK08180 114 AMYAGVPYAPVSPAYSLVSQDFGKLRHVLELLTPGLVFADDGAAFARALAAVVP--ADV-EVVAVRGAVP---------G 181 (614)
T ss_pred HHHcCCeEeeeccccccccCCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhcc--CCc-eEEEecCCCC---------C
Confidence 9999999999999998 7999999999999999997542 1111111111 111 2222221110 0
Q ss_pred ceEeeHHHHHhcCCCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC--CCcEEE
Q 010774 196 VSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS--EEDTYF 270 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~--~~d~~l 270 (501)
.....++++....... .......++++++|+|||||||.||||++||++++.........+ ... ..++++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~~l 256 (614)
T PRK08180 182 RAATPFAALLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTF-----PFLAEEPPVLV 256 (614)
T ss_pred cccccHHHHhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhc-----cccCCCCcEEE
Confidence 0123455555432111 111234568999999999999999999999999998887765544 332 568999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHH
Q 010774 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (501)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (501)
+.+|++|.+++.. ++.+++.|+++++.+. ....+++.++++++|+++++|.+++.+++.+...
T Consensus 257 ~~lPl~h~~g~~~~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~----------- 325 (614)
T PRK08180 257 DWLPWNHTFGGNHNLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERD----------- 325 (614)
T ss_pred EecchHHHhhHHHHHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhc-----------
Confidence 9999999999874 7789999999998752 3457788999999999999999999998743221
Q ss_pred HHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh----hC--CCeeeeeccc
Q 010774 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----SG--APLTQGYGLT 418 (501)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~----~~--~~l~~~yG~t 418 (501)
+...+.++ ++||.+++||+++++++.++|.+. +| +.+++.||+|
T Consensus 326 ----------------------~~~~~~~~--------~~lr~v~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~YG~T 375 (614)
T PRK08180 326 ----------------------AALRRRFF--------SRLKLLFYAGAALSQDVWDRLDRVAEATCGERIRMMTGLGMT 375 (614)
T ss_pred ----------------------hhhhhhhc--------cceeEEEEccCCCCHHHHHHHHHHHHhhcCCCceeeeeeccc
Confidence 11222223 389999999999999999999875 33 6799999999
Q ss_pred ccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccC
Q 010774 419 ESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHT 497 (501)
Q Consensus 419 E~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~T 497 (501)
|++.+++...... ..++++|+|+||++++|+| ++ ..|||+|+|++++.|||++|+.+++.| .||||+|
T Consensus 376 E~~~~~~~~~~~~-~~~~svG~p~pg~~v~i~d-~~---------~~GEi~vrg~~v~~GY~~~p~~t~~~~~~dgw~~T 444 (614)
T PRK08180 376 ETAPSATFTTGPL-SRAGNIGLPAPGCEVKLVP-VG---------GKLEVRVKGPNVTPGYWRAPELTAEAFDEEGYYRS 444 (614)
T ss_pred ccCCceEeccccc-CCCCcccCccCCcEEEEec-CC---------CCcEEEEecCccchhhcCChhHhHhhcccCCceec
Confidence 9987766543332 3458999999999999998 42 469999999999999999999999988 6899999
Q ss_pred CCC
Q 010774 498 EVH 500 (501)
Q Consensus 498 GD~ 500 (501)
||.
T Consensus 445 GDl 447 (614)
T PRK08180 445 GDA 447 (614)
T ss_pred cce
Confidence 995
No 18
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.7e-52 Score=435.37 Aligned_cols=384 Identities=21% Similarity=0.212 Sum_probs=301.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.+.|.+.++++|+++|+.+. +. +.+||+||.++++++|+.|.+. +||+|+++++|++++++++|
T Consensus 17 ~~~~~~~~~~~~~~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~---~gd~Val~~~n~~e~~~~~l 85 (539)
T PRK06334 17 SGKTVLESFLKLCSEMTTATVCWDE---QL-----GKLSYNQVRKAVIALATKVSKY---PDQHIGIMMPASAGAYIAYF 85 (539)
T ss_pred cCCcHHHHHHHHHHhCCCceEEEeC---CC-----CcccHHHHHHHHHHHHHHHhhc---cCCeEEEEcCCchHHHHHHH
Confidence 3478999999999999999998754 32 3799999999999999999873 89999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|+++.++.+++.++|+.++++++|++.+....+.+...........++.++..... ..
T Consensus 86 A~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~------------~~ 153 (539)
T PRK06334 86 ATLLSGKIPVMINWSQGLREVTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKE------------LS 153 (539)
T ss_pred HHHhcCCeeEecCcccchHHHHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhh------------cc
Confidence 999999999999999999999999999999999998765554432211100001123333221100 00
Q ss_pred HHHHHhc-----CC-----CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEE
Q 010774 201 WEEFLQL-----GT-----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (501)
Q Consensus 201 ~~~~~~~-----~~-----~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 270 (501)
+.+.... .. .........++++++|+|||||||.||+|.+||+++..........+ ....+|+++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l 228 (539)
T PRK06334 154 FWEKCRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFF-----SPKEDDVMM 228 (539)
T ss_pred HHHhhhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCCCceEE
Confidence 0111000 00 00112234678999999999999999999999999998877765555 678899999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEec--CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHH
Q 010774 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (501)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (501)
+.+|++|.+++.. ++.++..|+++++.. .++..+++.|+++++|+++++|++++.+++.....
T Consensus 229 ~~~p~~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-------------- 294 (539)
T PRK06334 229 SFLPPFHAYGFNSCTLFPLLSGVPVVFAYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQ-------------- 294 (539)
T ss_pred EecchHhhhhhHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhc--------------
Confidence 9999999999875 778999999998875 38999999999999999999999999987632111
Q ss_pred HHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceec
Q 010774 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFT 426 (501)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~ 426 (501)
..++ ++||.+++||+++++++.+++.+.+ ++.+++.||+||++.+++.
T Consensus 295 -----------------------~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~ 343 (539)
T PRK06334 295 -----------------------ESCL--------PSLRFVVIGGDAFKDSLYQEALKTFPHIQLRQGYGTTECSPVITI 343 (539)
T ss_pred -----------------------cccc--------ccccEEEECCccCCHHHHHHHHHHCCCCeEEecccccccCceEEe
Confidence 1111 3899999999999999999999988 6889999999999887766
Q ss_pred ccCCCCcccCcccccccCeEEEEeecCC-CCccCCCCCCCceEEEecCCccccccCCcccchhhh--ccCcccCCCC
Q 010774 427 SLADVFNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDGWFHTEVH 500 (501)
Q Consensus 427 ~~~~~~~~~~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~--~dgw~~TGD~ 500 (501)
...+.....+++|+|++|++++|+| ++ +.+++.| +.|||+|+|++++.|||++++.+.... .+|||+|||.
T Consensus 344 ~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~~~w~~TGD~ 417 (539)
T PRK06334 344 NTVNSPKHESCVGMPIRGMDVLIVS-EETKVPVSSG--ETGLVLTRGTSLFSGYLGEDFGQGFVELGGETWYVTGDL 417 (539)
T ss_pred ccCCCCCCCCcCceecCCCEEEEEc-CCCCccCCCC--ceEEEEEecCcccccccCCcccccceeeCCceeEECCCE
Confidence 5444434457899999999999999 54 5556555 899999999999999999998654322 3689999995
No 19
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=4.8e-52 Score=439.67 Aligned_cols=403 Identities=22% Similarity=0.290 Sum_probs=312.1
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
.+.|+.++|.+.++.+|+++|+++... ++.....+++||+||..++.++|++|+++|+++||+|+++++|++++++++|
T Consensus 23 ~~~t~~~~l~~~a~~~p~~~Al~~~~~-~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~Gi~~gd~V~i~~~n~~e~~~~~l 101 (632)
T PRK07529 23 LPASTYELLSRAAARHPDAPALSFLLD-ADPLDRPETWTYAELLADVTRTANLLHSLGVGPGDVVAFLLPNLPETHFALW 101 (632)
T ss_pred CCCCHHHHHHHHHHHCCCCceEEeecc-cCCCCCCceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 346899999999999999999987511 1111234689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCccCCCCccEEEEecCCChhh--HHHh--
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQ--KKEA-- 191 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~-- 191 (501)
||+++| +++|++|.++.+++.++++.++++++|++.... +.+..... ....++.++.++...... +...
T Consensus 102 A~~~~G-i~~pi~~~~~~~~i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~ 179 (632)
T PRK07529 102 GGEAAG-IANPINPLLEPEQIAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLA-ALPELRTVVEVDLARYLPGPKRLAVP 179 (632)
T ss_pred HHHHhC-EEEeCCCcCCHHHHHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHh-cCCcceeEEEecCccccccccccccc
Confidence 999999 579999999999999999999999999986542 22222111 223455555554321100 0000
Q ss_pred ---hhcCceEeeHHHHHhcCCCC--CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCC
Q 010774 192 ---EELGVSCFSWEEFLQLGTLD--CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE 266 (501)
Q Consensus 192 ---~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 266 (501)
......+..+.+.+...... ........+++++|+|||||||.||+|.+||++++.........+ .+..+
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~-----~~~~~ 254 (632)
T PRK07529 180 LIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLL-----GLGPG 254 (632)
T ss_pred ccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhc-----CCCCC
Confidence 00112244566655443211 112234678999999999999999999999999998887765555 66889
Q ss_pred cEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC----C---HHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 267 DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 267 d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~----~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
|++++.+|++|.++... ++.++..|+++++... + ...+++.++++++|++.++|++++.+++..
T Consensus 255 d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~-------- 326 (632)
T PRK07529 255 DTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYRGPGVIANFWKIVERYRINFLSGVPTVYAALLQVP-------- 326 (632)
T ss_pred CEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccCcchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc--------
Confidence 99999999999999885 7889999999998753 2 367889999999999999999999987521
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeeccc
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLT 418 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~t 418 (501)
....++ ++||.+++||+++++++.++|++.+++++++.||+|
T Consensus 327 ------------------------------~~~~~~--------~slr~v~~gg~~l~~~l~~~~~~~~g~~l~~~YG~T 368 (632)
T PRK07529 327 ------------------------------VDGHDI--------SSLRYALCGAAPLPVEVFRRFEAATGVRIVEGYGLT 368 (632)
T ss_pred ------------------------------ccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCcEeeeeccc
Confidence 001112 389999999999999999999999999999999999
Q ss_pred ccCcceecccCCCCcccCcccccccCeEEEEeec-CCC---CccCCCCCCCceEEEecCCccccccCCcccchhhh-ccC
Q 010774 419 ESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV-PEM---GYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDG 493 (501)
Q Consensus 419 E~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~-~~~---~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dg 493 (501)
|++.+++....+.....+++|+|+|+++++|+++ +++ .+++.+ +.|||+|+|++++.||++++. +...+ .+|
T Consensus 369 E~~~~~~~~~~~~~~~~~svG~~~p~~~v~i~~~d~~g~~~~~~~~g--~~Gel~v~gp~v~~GY~~~~~-~~~~~~~~g 445 (632)
T PRK07529 369 EATCVSSVNPPDGERRIGSVGLRLPYQRVRVVILDDAGRYLRDCAVD--EVGVLCIAGPNVFSGYLEAAH-NKGLWLEDG 445 (632)
T ss_pred ccCcccccCCccccccCCCcccccCCceEEEEEcCCCCcccccCCCC--CceEEEEECCCccccccCCcc-ccccccCCC
Confidence 9988776665544445689999999999999642 444 445444 899999999999999998754 45555 789
Q ss_pred cccCCCC
Q 010774 494 WFHTEVH 500 (501)
Q Consensus 494 w~~TGD~ 500 (501)
||+|||.
T Consensus 446 w~~TGDl 452 (632)
T PRK07529 446 WLNTGDL 452 (632)
T ss_pred ceEcCcE
Confidence 9999995
No 20
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-52 Score=438.10 Aligned_cols=389 Identities=20% Similarity=0.328 Sum_probs=300.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|+++++.+|+++|+++. +...+.++.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 46 ~~~~~l~~~l~~~a~~~pd~~a~~~~---~~~~~~~~~~Ty~el~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~ 122 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEAPDRPWLAQR---EPGHGQWRKVTYGEAKRAVDALAQALLDLGLDPGRPVMILSGNSIEHALMT 122 (624)
T ss_pred CcccCHHHHHHHHHHHCCCchheecc---cCCCCceEEeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHH
Confidence 35678999999999999999999875 332344578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCH-----HHHHHHHHhcCceEEEEcCCC-hhhhhhcCccCCCCccEEEEecCCChhhHHHhhh
Q 010774 120 EACNSQAITYVPLYDTLGA-----NAVEFIINHAEVSIAFVQENK-IPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEE 193 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vl~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 193 (501)
|||+++|++++|++|.++. +++.++++.++++++|+++.. .......... ... .++.+.....
T Consensus 123 lA~~~~G~v~vpl~p~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~-~~i~~~~~~~-------- 191 (624)
T PRK12582 123 LAAMQAGVPAAPVSPAYSLMSHDHAKLKHLFDLVKPRVVFAQSGAPFARALAALDL--LDV-TVVHVTGPGE-------- 191 (624)
T ss_pred HHHHHcCCeEeeccCccccccCCHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhh--cCc-eEEEEcCCCc--------
Confidence 9999999999999999885 899999999999999998642 1111121111 112 2333322110
Q ss_pred cCceEeeHHHHHhcCCCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC---CCc
Q 010774 194 LGVSCFSWEEFLQLGTLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS---EED 267 (501)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~---~~d 267 (501)
......++++....... .......++++++|+|||||||.||||++||++++.........+ ... ..+
T Consensus 192 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~ 265 (624)
T PRK12582 192 -GIASIAFADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLR-----PREPDPPPP 265 (624)
T ss_pred -ccccccHHHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhc-----cccCCCCCc
Confidence 00123445544322111 111224568899999999999999999999999998876654332 222 357
Q ss_pred EEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--C---HHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhH
Q 010774 268 TYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--D---VRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (501)
Q Consensus 268 ~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~---~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (501)
++++.+|++|.+|+.. ++.+++.|+++++.+. . ...+++.++++++|+++++|.+++.+++.+..
T Consensus 266 ~~l~~lPl~h~~g~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~--------- 336 (624)
T PRK12582 266 VSLDWMPWNHTMGGNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEK--------- 336 (624)
T ss_pred eEEEechHHHHHhHHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhh---------
Confidence 9999999999999875 6678999999998653 2 34567788999999999999999988764321
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh------CCCeeeee
Q 010774 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS------GAPLTQGY 415 (501)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~------~~~l~~~y 415 (501)
.+...+.+++ +||.+++||+++++++.++|++.+ ++.+++.|
T Consensus 337 ------------------------~~~~~~~~~~--------slr~i~~gGa~l~~~~~~~~~~~~~~~~g~~~~l~~~Y 384 (624)
T PRK12582 337 ------------------------DDALRRSFFK--------NLRLMAYGGATLSDDLYERMQALAVRTTGHRIPFYTGY 384 (624)
T ss_pred ------------------------CHHHHHHHhh--------heeEEEecCCCCCHHHHHHHHHHHHhhcCCCceEEecc
Confidence 1223333443 899999999999999999998863 36799999
Q ss_pred cccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCc
Q 010774 416 GLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGW 494 (501)
Q Consensus 416 G~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw 494 (501)
|+||++.+++..... ....+++|+|+||++++|++ .|+.|||+|+|++++.|||++|+.+++.| .|||
T Consensus 385 G~TE~~~~~~~~~~~-~~~~~svG~p~pg~~v~i~~----------~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~dgw 453 (624)
T PRK12582 385 GATETAPTTTGTHWD-TERVGLIGLPLPGVELKLAP----------VGDKYEVRVKGPNVTPGYHKDPELTAAAFDEEGF 453 (624)
T ss_pred ccccccceeecccCC-CCCCCCCCcCCCCcEEEEcc----------CCCceEEEEECCcccccccCCccchhhhcCccCC
Confidence 999998766533322 24458999999999999975 23689999999999999999999999988 7899
Q ss_pred ccCCCC
Q 010774 495 FHTEVH 500 (501)
Q Consensus 495 ~~TGD~ 500 (501)
|+|||.
T Consensus 454 ~~TGDl 459 (624)
T PRK12582 454 YRLGDA 459 (624)
T ss_pred ccccce
Confidence 999995
No 21
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=4.6e-52 Score=435.17 Aligned_cols=391 Identities=21% Similarity=0.186 Sum_probs=303.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
..-++.+.|.+.++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|++++++++|
T Consensus 5 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~Gv~~gd~V~v~~~n~~~~~~~~l 75 (563)
T PLN02860 5 SQAHICQCLTRLATLRGNAVVTISG---N------RRRTGHEFVDGVLSLAAGLLRLGLRNGDVVAIAALNSDLYLEWLL 75 (563)
T ss_pred hhhHHHHHHHHHHHhcCCceEEecC---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3467999999999999999999754 2 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|+++.++.+++.++++.+++++++++.+...............+..++........... .......
T Consensus 76 a~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~~~ 151 (563)
T PLN02860 76 AVACAGGIVAPLNYRWSFEEAKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFI----FLNSFLT 151 (563)
T ss_pred HHhhccEEEEeCCcccCHHHHHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCccccccc----chhhccc
Confidence 999999999999999999999999999999999998765332212111122223333333321100000 0000111
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
.+++.... ..........++++++|+|||||||.||+|.++|.+++.........+ .+..+|+++...|++|.+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~ 226 (563)
T PLN02860 152 TEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIV-----GYGEDDVYLHTAPLCHIG 226 (563)
T ss_pred cchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhc-----CCCCCCEEEEecCchhhc
Confidence 12221111 001111223568899999999999999999999999988776654444 678899999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
++...+.++..|+++++.+. ++..+++.++++++|+++++|+++..+++.....
T Consensus 227 g~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------------------- 281 (563)
T PLN02860 227 GLSSALAMLMVGACHVLLPKFDAKAALQAIKQHNVTSMITVPAMMADLISLTRKS------------------------- 281 (563)
T ss_pred cHHHHHHHHHcCceEEecCCCCHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhh-------------------------
Confidence 98888899999999988765 9999999999999999999999999987632110
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC------
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV------ 431 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~------ 431 (501)
....++ +++|.+++||+++++++.+.|++.| +..+++.||+||+++.++......
T Consensus 282 ----------~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 343 (563)
T PLN02860 282 ----------MTWKVF--------PSVRKILNGGGSLSSRLLPDAKKLFPNAKLFSAYGMTEACSSLTFMTLHDPTLESP 343 (563)
T ss_pred ----------hccccc--------cceeEEEeCCCcCCHHHHHHHHHhcCCCceecCCCccccCcccccccccccccccc
Confidence 000111 3899999999999999999999988 789999999999987554322111
Q ss_pred ----------------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCc
Q 010774 432 ----------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGW 494 (501)
Q Consensus 432 ----------------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw 494 (501)
.....++|+|+|+++++|++ ++ .++.|||+|+|++++.|||++++.+++.+ .|||
T Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~~-~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~g~ 415 (563)
T PLN02860 344 KQTLQTVNQTKSSSVHQPQGVCVGKPAPHVELKIGL-DE-------SSRVGRILTRGPHVMLGYWGQNSETASVLSNDGW 415 (563)
T ss_pred hhhhhhhcccccccccccCCcccCCccCCcEEEEec-CC-------CCceeEEEEecCcccccccCCccccchhccCCCe
Confidence 11123789999999999998 54 23799999999999999999999999888 7899
Q ss_pred ccCCCC
Q 010774 495 FHTEVH 500 (501)
Q Consensus 495 ~~TGD~ 500 (501)
|+|||.
T Consensus 416 ~~TGDl 421 (563)
T PLN02860 416 LDTGDI 421 (563)
T ss_pred EEccce
Confidence 999995
No 22
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=3.1e-52 Score=441.87 Aligned_cols=398 Identities=19% Similarity=0.257 Sum_probs=312.7
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
...+.|+++++.+|+++|+++. +...+..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||+
T Consensus 58 ~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~ 134 (625)
T TIGR02188 58 VSYNCVDRHLEARPDKVAIIWE---GDEPGEVRKITYRELHREVCRFANVLKSLGVKKGDRVAIYMPMIPEAAIAMLACA 134 (625)
T ss_pred HHHHHHHHhhccCCCCeEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHH
Confidence 4567788888899999999986 4323445789999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhhhcCccCCC-CccEEEEecCCChhhHHHhhh
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCL-YLKTIVSFANVSSSQKKEAEE 193 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~---------~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~ 193 (501)
++|++++|+++.++.+++.++++.++++++|+++.... .+..... ... .++.++.+........ .
T Consensus 135 ~~Gav~v~i~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~--- 209 (625)
T TIGR02188 135 RIGAIHSVVFGGFSAEALADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALE-KCPVSVEHVLVVRRTGNPVP-W--- 209 (625)
T ss_pred HhCCEEeccCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHH-hCCCCccEEEEEcCCCCCcC-c---
Confidence 99999999999999999999999999999999875321 1111111 112 3445555533211000 0
Q ss_pred cCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhh-cceeeeeccccCCCCcEEEEe
Q 010774 194 LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSF 272 (501)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~ 272 (501)
.......+++++..............+++++|+|||||||.||||+++|.+++..... ....+ ++..+|++++.
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~ 284 (625)
T TIGR02188 210 VEGRDVWWHDLMAKASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVF-----DIKDGDIFWCT 284 (625)
T ss_pred cccccccHHHHHhhcCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhcc-----CCCCCcEEEEC
Confidence 0011234556554432223334456789999999999999999999999998765433 22233 67788999999
Q ss_pred cChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHH
Q 010774 273 LPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (501)
Q Consensus 273 ~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (501)
.|++|..+... ++.+|+.|+++++... ++..+++.++++++|+++++|++++.+.+...
T Consensus 285 ~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--------------- 349 (625)
T TIGR02188 285 ADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGD--------------- 349 (625)
T ss_pred CCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCC---------------
Confidence 99999988765 7889999999998753 78999999999999999999999999876310
Q ss_pred HHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC---CCeeeeecccccCcc
Q 010774 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESCSG 423 (501)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~l~~~yG~tE~~~~ 423 (501)
...++.++ ++||.+++||+++++++.+++.+.++ +++++.||+||+++.
T Consensus 350 --------------------~~~~~~~l--------~~lr~i~~~G~~l~~~~~~~~~~~~~~~~~~i~~~yG~TE~~~~ 401 (625)
T TIGR02188 350 --------------------EWVKKHDL--------SSLRLLGSVGEPINPEAWMWYYKVVGKERCPIVDTWWQTETGGI 401 (625)
T ss_pred --------------------cccccCCc--------cceeEEEEecCCCCHHHHHHHHHHcCCCCCceEecccccccCCc
Confidence 11122233 38999999999999999999999875 789999999999887
Q ss_pred eecccCC-CCcccCcccccccCeEEEEeecCCCCccC-CCCCCCceEEEec--CCccccccCCcccchhhh---ccCccc
Q 010774 424 CFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDA-LSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWFH 496 (501)
Q Consensus 424 ~~~~~~~-~~~~~~s~G~p~p~~~i~I~d~~~~~~~~-~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~---~dgw~~ 496 (501)
++..... ...+++++|+|++|++++|+| ++++.++ .+ +.|||+|+| |+++.|||++++.+.+.+ .+|||+
T Consensus 402 ~~~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~g~~~~~~g--~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~~~~g~~~ 478 (625)
T TIGR02188 402 MITPLPGATPTKPGSATLPFFGIEPAVVD-EEGNPVEGPG--EGGYLVIKQPWPGMLRTIYGDHERFVDTYFSPFPGYYF 478 (625)
T ss_pred eeecCCCCCCcCCCcccCCcCCceEEEEC-CCCCCCCCCC--CeEEEEEccCCCcccccccCChHHHHHHHhccCCCEEE
Confidence 6544332 234568999999999999999 8888776 44 899999999 689999999998877765 479999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 479 TGDl 482 (625)
T TIGR02188 479 TGDG 482 (625)
T ss_pred CCce
Confidence 9995
No 23
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-52 Score=434.46 Aligned_cols=385 Identities=19% Similarity=0.198 Sum_probs=313.1
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.++|.++++.+|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 49 ~~~~~~~~~~a~~~pd~~Al~~~---~------~~~Ty~el~~~~~~la~~L~~~gi~~gd~V~i~~~n~~~~~~~~la~ 119 (549)
T PRK07788 49 GPFAGLVAHAARRAPDRAALIDE---R------GTLTYAELDEQSNALARGLLALGVRAGDGVAVLARNHRGFVLALYAA 119 (549)
T ss_pred chHHHHHHHHHHHCCCceEEEEC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 48999999999999999999864 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++.++.+++.++++.++++++|++.+....+... ......+..++....... .....+..++
T Consensus 120 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~ 191 (549)
T PRK07788 120 GKVGARIILLNTGFSGPQLAEVAAREGVKALVYDDEFTDLLSAL-PPDLGRLRAWGGNPDDDE-------PSGSTDETLD 191 (549)
T ss_pred HhcCCEEEEeCCCCCHHHHHHHHHhcCCcEEEECchhHHHHHhh-ccccccceEEEEecCccc-------cCCcCcccHH
Confidence 99999999999999999999999999999999998766654332 111222222222211110 0012345677
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
++...... ...+...++.++++|||||||.||+|.++|.+++..+..+...+ .+..+++++...|++|.+|+.
T Consensus 192 ~~~~~~~~--~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~ 264 (549)
T PRK07788 192 DLIAGSST--APLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRV-----PFRAGETTLLPAPMFHATGWA 264 (549)
T ss_pred HHhcCCCC--CCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhC-----CCCcCCeEEEccchHHHHHHH
Confidence 77654321 12223456789999999999999999999999998877765555 677889999999999999998
Q ss_pred HHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC
Q 010774 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (501)
Q Consensus 283 ~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (501)
.++.++..|+++++... ++..+++.++++++|+++++|++++.+++.....
T Consensus 265 ~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---------------------------- 316 (549)
T PRK07788 265 HLTLAMALGSTVVLRRRFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEV---------------------------- 316 (549)
T ss_pred HHHHHHHhCCEEEECCCCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccc----------------------------
Confidence 78889999999988764 9999999999999999999999999987632110
Q ss_pred CCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCccccc
Q 010774 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (501)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p 441 (501)
....++ ++||.+++||+++++++.+++.+.++..+++.||+||++.++.....+....++++|+|
T Consensus 317 -------~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~vG~~ 381 (549)
T PRK07788 317 -------LAKYDT--------SSLKIIFVSGSALSPELATRALEAFGPVLYNLYGSTEVAFATIATPEDLAEAPGTVGRP 381 (549)
T ss_pred -------cCCCCC--------CceeEEEEeCCCCCHHHHHHHHHHhCccceeccCcchhchhhccChhhhhhcCCCcccC
Confidence 011111 38999999999999999999999999999999999999876554443333455899999
Q ss_pred ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 442 ~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++++++|+| +++.+++.| +.|||+|+|+.++.||+++++. ...+|||+|||.
T Consensus 382 ~~~~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~---~~~~g~~~TGDl 434 (549)
T PRK07788 382 PKGVTVKILD-ENGNEVPRG--VVGRIFVGNGFPFEGYTDGRDK---QIIDGLLSSGDV 434 (549)
T ss_pred CCCcEEEEEC-CCcCCCCCC--CeEEEEEeCCCccccccCCCcc---cccCCceecCce
Confidence 9999999999 888877775 8999999999999999998765 235899999995
No 24
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1e-51 Score=433.40 Aligned_cols=391 Identities=16% Similarity=0.238 Sum_probs=318.6
Q ss_pred CCHHHHHHHHHH-hCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAK-RIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~-~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.+.+.+.+++. .+|+++|+.+. +.. ..+.+||+||.++++++|++|.++|+++||+|+++++|++++++++||
T Consensus 43 ~~~~~~~~~~~~~~~~~~~a~~~~---~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~la 117 (570)
T PRK04319 43 NIAYEAIDRHADGGRKDKVALRYL---DAS--RKEKYTYKELKELSNKFANVLKELGVEKGDRVFIFMPRIPELYFALLG 117 (570)
T ss_pred eHHHHHHHHhhccCCCCceEEEEE---CCC--CceeecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 445678888877 47999999876 432 236899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++.++.+++.++++.++++.++++......... ......+.++.++.... .......+
T Consensus 118 ~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~---~~~~~~~~~~~~~~~~~--------~~~~~~~~ 186 (570)
T PRK04319 118 ALKNGAIVGPLFEAFMEEAVRDRLEDSEAKVLITTPALLERKPA---DDLPSLKHVLLVGEDVE--------EGPGTLDF 186 (570)
T ss_pred HHHcCcEEcccccccCHHHHHHHHHccCCcEEEEChhhhhccch---hcCCCceEEEEECCCcC--------CCcCccCH
Confidence 99999999999999999999999999999999998775543321 12233445555543211 01123456
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.+++.............++++++++|||||||.||+|.++|.+++..+......+ .+..+|++++..|++|.+|.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~g~ 261 (570)
T PRK04319 187 NALMEQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVL-----DLHEDDVYWCTADPGWVTGT 261 (570)
T ss_pred HHHHhhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhc-----CCCCCceEEecCChHHhhCc
Confidence 6655443222333444678899999999999999999999999998887766655 67889999999999999987
Q ss_pred HH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 282 II-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 282 ~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
.. ++.++..|+++++... ++..+++.++++++|+++++|.+++.+++...
T Consensus 262 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 314 (570)
T PRK04319 262 SYGIFAPWLNGATNVIDGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGD--------------------------- 314 (570)
T ss_pred hHHHHHHHhcCceEEEECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCC---------------------------
Confidence 75 7889999999998753 89999999999999999999999999875210
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcc
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTV 438 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~ 438 (501)
......++ +++|.+++||+++++++.+++++.++.++++.||+||++++++.........++++
T Consensus 315 --------~~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~ 378 (570)
T PRK04319 315 --------DLVKKYDL--------SSLRHILSVGEPLNPEVVRWGMKVFGLPIHDNWWMTETGGIMIANYPAMDIKPGSM 378 (570)
T ss_pred --------cccccCCc--------ccceEEEEcccCCCHHHHHHHHHHhCCCeEeceeecccCCEEEecCCCCCCCCCcC
Confidence 00111222 38999999999999999999999999999999999999887665444334456899
Q ss_pred cccccCeEEEEeecCCCCccCCCCCCCceEEEec--CCccccccCCcccchhhhccCcccCCCC
Q 010774 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 439 G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
|+|+||++++|+| +++.+++.| +.|||+++| ++++.|||++++.+++.|.+|||+|||.
T Consensus 379 G~p~~g~~~~i~d-~~~~~~~~g--~~Gel~i~~~~~~~~~GY~~~~~~~~~~~~~gw~~TGDl 439 (570)
T PRK04319 379 GKPLPGIEAAIVD-DQGNELPPN--RMGNLAIKKGWPSMMRGIWNNPEKYESYFAGDWYVSGDS 439 (570)
T ss_pred cCCCCCCEEEEEC-CCCCCCCCC--CceEEEEcCCCChHHhHhcCCHHHhhhhhcCCceEeCcE
Confidence 9999999999999 888877655 899999997 8999999999999999888999999995
No 25
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.8e-51 Score=426.36 Aligned_cols=387 Identities=22% Similarity=0.276 Sum_probs=313.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|++.++.+|+++|+++. +...+..+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 24 ~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~Ty~el~~~~~~~a~~L~~~g~~~g~~Val~~~n~~e~~~~~la~ 100 (547)
T PRK13295 24 RTINDDLDACVASCPDKTAVTAV---RLGTGAPRRFTYRELAALVDRVAVGLARLGVGRGDVVSCQLPNWWEFTVLYLAC 100 (547)
T ss_pred CCHHHHHHHHHHHCCCceEEEec---CCCccccceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHHH
Confidence 57999999999999999999876 433334478999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
+++|++++|++|.++.+++.++++.++++++++++... +.+.+ .......+..++.++...
T Consensus 101 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------- 166 (547)
T PRK13295 101 SRIGAVLNPLMPIFRERELSFMLKHAESKVLVVPKTFRGFDHAAMARR-LRPELPALRHVVVVGGDG------------- 166 (547)
T ss_pred HhcCcEEeccccccCHHHHHHHHHhcCceEEEEeccccCcchHHHHHH-HhhhCCCcceEEEecCCC-------------
Confidence 99999999999999999999999999999999987642 11111 111223444555544321
Q ss_pred EeeHHHHHhcC--------CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEE
Q 010774 198 CFSWEEFLQLG--------TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (501)
Q Consensus 198 ~~~~~~~~~~~--------~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~ 269 (501)
...+.++.... ...........+++++|+|||||||.||+|.++|.+++..+......+ .+..++++
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~ 241 (547)
T PRK13295 167 ADSFEALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERL-----GLGADDVI 241 (547)
T ss_pred ccCHHHHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHh-----CCCCCCeE
Confidence 11233332211 001112234568899999999999999999999999998887765555 67889999
Q ss_pred EEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHH
Q 010774 270 FSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (501)
Q Consensus 270 l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (501)
++..|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.++..+.+....
T Consensus 242 l~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~--------------- 306 (547)
T PRK13295 242 LMASPMAHQTGFMYGLMMPVMLGATAVLQDIWDPARAAELIRTEGVTFTMASTPFLTDLTRAVKE--------------- 306 (547)
T ss_pred EEecCchhhhhHHHHHHHHHHcCCeEEeCCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc---------------
Confidence 99999999999875 7889999999998775 899999999999999999999999988753211
Q ss_pred HHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecc
Q 010774 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTS 427 (501)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 427 (501)
...++ +++|.+++||+++++++.+++.+.+++.+++.||+||++.+++..
T Consensus 307 ----------------------~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~ 356 (547)
T PRK13295 307 ----------------------SGRPV--------SSLRTFLCAGAPIPGALVERARAALGAKIVSAWGMTENGAVTLTK 356 (547)
T ss_pred ----------------------cCCCc--------ccceEEEEecCCCCHHHHHHHHHHhCCCeEEeccCCCCCCeeecc
Confidence 01111 389999999999999999999998999999999999998765544
Q ss_pred cCCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 428 LADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 428 ~~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.... .....++|+|+++++++|+| +++.+++.| +.|||+|+|++++.||+++++.++.. .+|||+|||.
T Consensus 357 ~~~~~~~~~~~~G~~~~~~~v~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~-~~g~~~TGD~ 426 (547)
T PRK13295 357 LDDPDERASTTDGCPLPGVEVRVVD-ADGAPLPAG--QIGRLQVRGCSNFGGYLKRPQLNGTD-ADGWFDTGDL 426 (547)
T ss_pred CCCcchhccCccccccCCcEEEEEC-CCCCCCCCC--CCCeEEEEcCcccccccCCccccccC-CCCCeecceE
Confidence 3222 22346899999999999999 888877665 89999999999999999999988766 5899999995
No 26
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=4.2e-51 Score=433.94 Aligned_cols=397 Identities=19% Similarity=0.257 Sum_probs=310.6
Q ss_pred HHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHh
Q 010774 45 PWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNS 124 (501)
Q Consensus 45 l~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 124 (501)
..+.|+++++.+|+++|+++. +..++..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 69 ~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~lTy~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 145 (637)
T PRK00174 69 SYNCLDRHLKTRGDKVAIIWE---GDDPGDSRKITYRELHREVCRFANALKSLGVKKGDRVAIYMPMIPEAAVAMLACAR 145 (637)
T ss_pred HHHHHHHhhccCCCCeEEEEE---CCCCCceEEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHH
Confidence 456788889999999999986 43333457899999999999999999999999999999999999999999999999
Q ss_pred cCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 125 QAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 125 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
+|++++|++|.++.+++.++++.++++++|+++.... .+..... ....++.++.+........ . ..
T Consensus 146 ~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-~---~~ 220 (637)
T PRK00174 146 IGAVHSVVFGGFSAEALADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALA-NCPSVEKVIVVRRTGGDVD-W---VE 220 (637)
T ss_pred cCCEEEecCCCCCHHHHHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHH-hCCCccEEEEEcCCCCCcC-c---CC
Confidence 9999999999999999999999999999999875421 1111111 1234445555543221000 0 00
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhh-cceeeeeccccCCCCcEEEEecC
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSFLP 274 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~~p 274 (501)
.....++++...............+++++|+|||||||.||||+++|++++..... ....+ .+..+|++++..|
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~ 295 (637)
T PRK00174 221 GRDLWWHELVAGASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVF-----DYKDGDVYWCTAD 295 (637)
T ss_pred CCcccHHHHHhhcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhcc-----CCCCCcEEEEcCC
Confidence 11234556554332223334456789999999999999999999999998765433 22233 6678899999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
++|..+... ++.+|+.|+++++.+. ++..+++.++++++|++.++|++++.+++....
T Consensus 296 ~~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---------------- 359 (637)
T PRK00174 296 VGWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDE---------------- 359 (637)
T ss_pred chHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCc----------------
Confidence 999998874 7889999999998753 789999999999999999999999988752100
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC---CCeeeeecccccCccee
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESCSGCF 425 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~l~~~yG~tE~~~~~~ 425 (501)
.....++ ++||.+++||+++++++.+++.+.++ +++++.||+||++++++
T Consensus 360 -------------------~~~~~~~--------~~lr~i~~~Ge~l~~~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~ 412 (637)
T PRK00174 360 -------------------HPKKYDL--------SSLRLLGSVGEPINPEAWEWYYKVVGGERCPIVDTWWQTETGGIMI 412 (637)
T ss_pred -------------------ccccCCc--------cceeEEEEeCCCCCHHHHHHHHHHhCCCCCceEecccccccCCceE
Confidence 0111222 38999999999999999999998875 78999999999988765
Q ss_pred cccCCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec--CCccccccCCcccchhhh---ccCcccCCC
Q 010774 426 TSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWFHTEV 499 (501)
Q Consensus 426 ~~~~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~---~dgw~~TGD 499 (501)
...... ...++++|+|++|++++|+| +++.+++.+ +.|||+|+| |+++.|||++++.+.+.+ .+|||+|||
T Consensus 413 ~~~~~~~~~~~~~vG~p~~g~~~~i~d-~~g~~~~~g--~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~~~~g~~~TGD 489 (637)
T PRK00174 413 TPLPGATPLKPGSATRPLPGIQPAVVD-EEGNPLEGG--EGGNLVIKDPWPGMMRTIYGDHERFVKTYFSTFKGMYFTGD 489 (637)
T ss_pred ecCCCCCCcCCCcccCCCCCceEEEEC-CCCCCCCCC--CcEEEEEcCCCCcccccccCCHHHHHHhhhcCCCCEEECCc
Confidence 443322 33458999999999999999 888887765 899999999 699999999998877765 479999999
Q ss_pred C
Q 010774 500 H 500 (501)
Q Consensus 500 ~ 500 (501)
.
T Consensus 490 l 490 (637)
T PRK00174 490 G 490 (637)
T ss_pred e
Confidence 4
No 27
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=3.7e-51 Score=433.15 Aligned_cols=399 Identities=16% Similarity=0.152 Sum_probs=306.6
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
...+.|+++++.+|+++|+++. +...+..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||+
T Consensus 53 ~~~~~l~~~~~~~p~~~Al~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~n~~e~v~~~lA~~ 129 (628)
T TIGR02316 53 LCHNALDRHLDERGEQLALVTV---SSETGQERTLTYRQLHREVNVFASALRALGVGRGDRVLIYMPMIAEAVFAMLACA 129 (628)
T ss_pred HHHHHHHHHhCcCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3467888888899999999985 4333444789999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
++|++++|+++.++.+++..+++.++++++|+++... ..+.............++.++...... ...
T Consensus 130 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~~ 205 (628)
T TIGR02316 130 RIGAIHSVVFGGFASHSLALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAPM----RLI 205 (628)
T ss_pred HhCCEEEecCCCCCHHHHHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----Ccc
Confidence 9999999999999999999999999999999986432 111111111112334555554321100 000
Q ss_pred CceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH-HhhcceeeeeccccCCCCcEEEEe
Q 010774 195 GVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDTYFSF 272 (501)
Q Consensus 195 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d~~l~~ 272 (501)
......++++..... ...+.....++++++|+|||||||.||||+++|.+++.. ...+...+ ++..+|++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~~ 280 (628)
T TIGR02316 206 PGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIF-----GIRAGQVMFSA 280 (628)
T ss_pred cCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCcEEEEc
Confidence 001234555544321 112222346789999999999999999999999998644 33333344 67889999999
Q ss_pred cChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHH
Q 010774 273 LPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (501)
Q Consensus 273 ~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (501)
.|+.|..++.. ++.+|+.|+++++.++ ++..+++.++++++|+++++|++++.+.+..
T Consensus 281 ~~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~---------------- 344 (628)
T TIGR02316 281 SDVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQD---------------- 344 (628)
T ss_pred CCCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcC----------------
Confidence 99999998764 7889999999999763 7889999999999999999999999876521
Q ss_pred HHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceec
Q 010774 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT 426 (501)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~ 426 (501)
.....+.++ ++||.+++||+++++++.+++++.++..+++.||+||++..++.
T Consensus 345 -------------------~~~~~~~~l--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~~~yG~TE~~~~~~~ 397 (628)
T TIGR02316 345 -------------------AAWLRKHDL--------SSLHWLFLAGEPLDEPTAHWITDGLGKPVIDNYWQTETGWPVLA 397 (628)
T ss_pred -------------------CcccccCCc--------cceeEEEEecCCCCHHHHHHHHHHhCCCEEecccccccCceeec
Confidence 011122233 38999999999999999999999889999999999999865443
Q ss_pred ccCC---CCcccCcccccccCeEEEEeecC-CCCccCCCCCCCceEEEecC---CccccccCCcccchhhh----ccCcc
Q 010774 427 SLAD---VFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVI----VDGWF 495 (501)
Q Consensus 427 ~~~~---~~~~~~s~G~p~p~~~i~I~d~~-~~~~~~~~~~~~Gei~v~g~---~v~~gY~~~~~~~~~~~----~dgw~ 495 (501)
.... .....+++|+|+||++++|+| + ++++++.+ +.|||+|+|| +.+.|||++++.+.+.+ .+|||
T Consensus 398 ~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~~~~~g--~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 474 (628)
T TIGR02316 398 IMPGLDLKPVKLGSPGLPMYGYHLRVLD-EATGRPCGPN--EKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSHFKRPLY 474 (628)
T ss_pred CCCCCCcCCCCCCCcccCcCCceEEEEE-CCCCCCCCCC--CcEEEEEecCCCccccccccCChHHHHHhhhhcCCCCEE
Confidence 3222 123458999999999999999 6 67777655 8999999998 57899999988776544 57899
Q ss_pred cCCCC
Q 010774 496 HTEVH 500 (501)
Q Consensus 496 ~TGD~ 500 (501)
+|||.
T Consensus 475 ~TGD~ 479 (628)
T TIGR02316 475 SSFDW 479 (628)
T ss_pred ECCce
Confidence 99995
No 28
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=3.1e-52 Score=421.25 Aligned_cols=380 Identities=28% Similarity=0.457 Sum_probs=293.2
Q ss_pred HHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 49 l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
|+++|+++||++|+++. +. +.+||+||.++++++|..|.+.|+++||+|+++++|+++++++++||+++|++
T Consensus 1 f~~~a~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~L~~~g~~~~~~V~i~~~n~~~~~~~~~A~~~~G~~ 72 (417)
T PF00501_consen 1 FERQAQRYPDRIALIDD---EG-----RSLTYKQLYERVRKLAAALRKLGVKKGDRVAILLPNSIEFVVAFLACLRAGAI 72 (417)
T ss_dssp HHHHHHHSTTSEEEEET---TT-----EEEEHHHHHHHHHHHHHHHHHTTSSTTSEEEEEESSSHHHHHHHHHHHHTT-E
T ss_pred ChhHHhhCCCceEEEEC---CC-----EEEEHHHHHHHHHHHhhHHHHhCCCccccccccCCccceeeeeeccccccccc
Confidence 68999999999999971 22 69999999999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCHHHHHHHHHhcCceEEEE----cCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHH
Q 010774 129 YVPLYDTLGANAVEFIINHAEVSIAFV----QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEF 204 (501)
Q Consensus 129 ~v~l~~~~~~~~l~~~l~~~~~~~vl~----~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (501)
++|++|.++.+++.++++.++++++|+ +......+..... .......++.++....... +.+
T Consensus 73 ~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-------------~~~ 138 (417)
T PF00501_consen 73 PVPLDPSLSEDELRHILRQSGPKVIITSEAVDSEPLKKLKSIFK-QEDPSSSIIILDRDDLPKK-------------EAL 138 (417)
T ss_dssp EEEEETTSSHHHHHHHHHHHTESEEEECHHHSCHHHHHHHHHHT-TSTTTEEEEEESHSSCTTC-------------HHH
T ss_pred ccccccccccccccccccccceeEEEEeccccccccccchhhhc-ccccccccccccccccccc-------------ccc
Confidence 999999999999999999999999998 1111111212111 1122334444443221100 000
Q ss_pred HhcC-CCCCCCCC-CCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH-
Q 010774 205 LQLG-TLDCELPP-KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ- 281 (501)
Q Consensus 205 ~~~~-~~~~~~~~-~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~- 281 (501)
.... ..... .. ..++++++++|||||||.||+|.++|+++++.+..+. +... ..+. |++++.+|++|.+|+
T Consensus 139 ~~~~~~~~~~-~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~--~~~~-~~~~--d~~l~~~p~~~~~g~~ 212 (417)
T PF00501_consen 139 KSASLSDEPQ-SPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALA--LPEY-FGLG--DRILSFLPLSHIFGLI 212 (417)
T ss_dssp HHHHHCHCSH-STTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHH--HHHT-TTTT--TEEEESS-TTSHHHHH
T ss_pred cccccccccc-cCCCCccceeEeeccccccccccccccccccccccccccc--cccc-cccC--ceEEeecccccccccc
Confidence 1000 00000 00 0468999999999999999999999999999988764 1000 1222 699999999999999
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+++.|+++++.+. ++..+++.++++++|+++++|.+++.+++..+.. .
T Consensus 213 ~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~---------------------- 269 (417)
T PF00501_consen 213 SALLAALFSGATLVLPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-T---------------------- 269 (417)
T ss_dssp HHHHHHHHCTSEEEEESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-H----------------------
T ss_pred ccccccccccccccccccccccccccchhccccccccccccccccccccccccccc-c----------------------
Confidence 569999999999999986 2477899999999999999999999997621110 0
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCC-CeeeeecccccCcceeccc-CCCCccc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSL-ADVFNMI 435 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~-~~~~~~~ 435 (501)
.....++ +++|.+++||+++++++.+++++.++. ++++.||+||++.+++... .......
T Consensus 270 ----------~~~~~~l--------~~lr~v~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~tE~~~~~~~~~~~~~~~~~ 331 (417)
T PF00501_consen 270 ----------KISKKDL--------SSLRTVISGGEPLPPDLLRRLRKAFGNAPIINLYGSTETGSIATIRPPEDDIEKP 331 (417)
T ss_dssp ----------HGTTTTG--------TT-SEEEEESST-CHHHHHHHHHHHTTSEEEEEEEEGGGSSEEEEEETTTHHSST
T ss_pred ----------ccccccc--------ccccccccccccCChhhccccccccccccceecccccccceeeeccccccccccc
Confidence 0000112 379999999999999999999999987 8999999999999987653 2333456
Q ss_pred CcccccccCeEEEEeecCC-CCccCCCCCCCceEEEecCCccccccCCcccchhhhc-cCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-DGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~-dgw~~TGD~ 500 (501)
+++|+|+|+++++|+| ++ +++++.+ +.|||+|+|++++.||+++++.+++.|. +|||+|||.
T Consensus 332 ~~~G~~~~~~~~~ivd-~~~~~~~~~g--~~Gei~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 395 (417)
T PF00501_consen 332 GSVGKPLPGVEVKIVD-PNTGEPLPPG--EPGEIVIRGPNVFSGYYNDPELTAEAFIDDGWYRTGDL 395 (417)
T ss_dssp TSEBEESTTEEEEEEC-TTTSSBESTT--SEEEEEEESTTSBSEETTBHHHHHHHEETTSEEEEEEE
T ss_pred cccccccccccccccc-cccccccccc--ccccccccCCccceeeeccccccccccccccceecceE
Confidence 8999999999999999 65 7777665 8999999999999999999999999995 489999995
No 29
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1e-50 Score=424.75 Aligned_cols=410 Identities=20% Similarity=0.252 Sum_probs=308.4
Q ss_pred CCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCC
Q 010774 23 GPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNP 101 (501)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~ 101 (501)
.+++++..+...++.. ...++.+.+... +.+|+++|+++. +.. ..+||+||.++++++|++|.+ .|+++
T Consensus 22 ~~~~~~~~~~~~~~~~--~~~~~~~~l~~~-~~~~~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~~G~~~ 91 (560)
T PLN02574 22 TGIYSSKHPPVPLPSD--PNLDAVSFIFSH-HNHNGDTALIDS---STG----FSISYSELQPLVKSMAAGLYHVMGVRQ 91 (560)
T ss_pred CeeecCCCCCCCCCCC--CCCCHHHHHhcC-cccCCCCEEEEC---CCC----CcccHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3555555433222221 223444444433 678999999864 321 369999999999999999999 99999
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEec
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (501)
||+|+++++|++++++++|||+++|++++|++|..+.+++.++++.++++++|++.+....+... ... ++.+.
T Consensus 92 gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~ 164 (560)
T PLN02574 92 GDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNPSSSLGEIKKRVVDCSVGLAFTSPENVEKLSPL------GVP-VIGVP 164 (560)
T ss_pred CCEEEEECCCcchHHHHHHHHHHhCeEEeCcCcccCHHHHHHHHHhcCCEEEEECHHHHHHHHhc------CCc-EEecC
Confidence 99999999999999999999999999999999999999999999999999999988765554321 111 22221
Q ss_pred CCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccc
Q 010774 182 NVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGK 261 (501)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~ 261 (501)
....... .......+++++.............++++++++|||||||.||||++||++++..+..+.........
T Consensus 165 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~ 239 (560)
T PLN02574 165 ENYDFDS-----KRIEFPKFYELIKEDFDFVPKPVIKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYE 239 (560)
T ss_pred ccccccc-----CccCcccHHHHhhcCCcccccCCCCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccc
Confidence 1100000 00112345555444322222333457889999999999999999999999999877655331111111
Q ss_pred cCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 262 VCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 262 ~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
.....++++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+++....
T Consensus 240 ~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------- 312 (560)
T PLN02574 240 YPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIVVMRRFDASDMVKVIDRFKVTHFPVVPPILMALTKKAKG------- 312 (560)
T ss_pred cCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEecCCCHHHHHHHHHHcCCeEEecCCHHHHHHHhCccc-------
Confidence 2335688999999999999886 6678889999988875 999999999999999999999999998762100
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeeccc
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLT 418 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~t 418 (501)
....++ +++|.+++||+++++++.++|.+.+ ++.+++.||+|
T Consensus 313 -----------------------------~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~v~~~YG~t 355 (560)
T PLN02574 313 -----------------------------VCGEVL--------KSLKQVSCGAAPLSGKFIQDFVQTLPHVDFIQGYGMT 355 (560)
T ss_pred -----------------------------cccCcc--------ccceEEEEecccCCHHHHHHHHHHCCCCcEEeccccc
Confidence 011122 3899999999999999999999888 68999999999
Q ss_pred ccCcceecccCC-CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCccc
Q 010774 419 ESCSGCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFH 496 (501)
Q Consensus 419 E~~~~~~~~~~~-~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~ 496 (501)
|++.+++..... .....+++|+|+|+++++|+|.+++.+++.| +.|||||+|++++.|||++++.+++.| .||||+
T Consensus 356 E~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~g~~~~~g--~~Gei~v~g~~~~~GY~~~~~~t~~~~~~~g~~~ 433 (560)
T PLN02574 356 ESTAVGTRGFNTEKLSKYSSVGLLAPNMQAKVVDWSTGCLLPPG--NCGELWIQGPGVMKGYLNNPKATQSTIDKDGWLR 433 (560)
T ss_pred ccCceeecCCCccccCCCCceeeeCCCcEEEEEeCCCCcCCCCC--CCeEEEEECcchhhhhcCChhHhhhhccCCCCcc
Confidence 998765433222 2244589999999999999995566666655 899999999999999999999998887 789999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 434 TGDl 437 (560)
T PLN02574 434 TGDI 437 (560)
T ss_pred cceE
Confidence 9995
No 30
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=3.4e-50 Score=419.17 Aligned_cols=407 Identities=22% Similarity=0.302 Sum_probs=321.6
Q ss_pred CCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCC
Q 010774 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (501)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~ 100 (501)
.++-+||+..+.... .+..++.+.+.++++++|+++|+++. +.. +.+||.||.++++++|+.|.+.|++
T Consensus 5 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~~~a~~~~---~~~----~~~ty~el~~~~~~la~~L~~~g~~ 73 (537)
T PLN02246 5 SEEFIFRSKLPDIYI----PNHLPLHDYCFERLSEFSDRPCLIDG---ATG----RVYTYADVELLSRRVAAGLHKLGIR 73 (537)
T ss_pred cceeEecCCCCCCCC----CCCCcHHHHHHHHHHhCCCCeEEEec---CCC----ceeeHHHHHHHHHHHHHHHHHhCCC
Confidence 455677777666422 23468999999999999999999864 321 5799999999999999999999999
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEe
Q 010774 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (501)
Q Consensus 101 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (501)
+||+|+++++|+++++++++||+++|++++|++|.++.+++..+++.++++++|++......+...... .. ..++.+
T Consensus 74 ~gd~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~-~~~i~~ 150 (537)
T PLN02246 74 QGDVVMLLLPNCPEFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKLIITQSCYVDKLKGLAED--DG-VTVVTI 150 (537)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHHhhc--CC-ceEEEe
Confidence 999999999999999999999999999999999999999999999999999999988766554332211 11 134444
Q ss_pred cCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecc
Q 010774 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (501)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~ 260 (501)
+... .....+.++........+.....++++++++|||||||.||+|+++|++++.......... ...
T Consensus 151 ~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~-~~~ 218 (537)
T PLN02246 151 DDPP-----------EGCLHFSELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGE-NPN 218 (537)
T ss_pred CCCC-----------CCceeHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhcc-ccc
Confidence 3221 1123444544332222223334678999999999999999999999999988776543211 111
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 261 ~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
..+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+++..
T Consensus 219 ~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------- 290 (537)
T PLN02246 219 LYFHSDDVILCVLPMFHIYSLNSVLLCGLRVGAAILIMPKFEIGALLELIQRHKVTIAPFVPPIVLAIAKSP-------- 290 (537)
T ss_pred cCCCCCcEEEEeechHHHHHHHHHHHHHHhcCCEEEEeCCCCHHHHHHHHHHhCceEEEcchHHHHHHhcCc--------
Confidence 26788999999999999999875 7788999999999876 8999999999999999999999998886521
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecc
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGL 417 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~ 417 (501)
.....++ +++|.+++||+++++++.+.+++.+ +..+++.||+
T Consensus 291 -----------------------------~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~YG~ 333 (537)
T PLN02246 291 -----------------------------VVEKYDL--------SSIRMVLSGAAPLGKELEDAFRAKLPNAVLGQGYGM 333 (537)
T ss_pred -----------------------------cccccCc--------cceeEEEEecCcCCHHHHHHHHHHcCCCeEeccccc
Confidence 1111122 2799999999999999999999988 6789999999
Q ss_pred cccCcceecccC----CCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-cc
Q 010774 418 TESCSGCFTSLA----DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD 492 (501)
Q Consensus 418 tE~~~~~~~~~~----~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~d 492 (501)
||++.+++.... .....++++|+|+++++++|+|.+++.+++.+ +.|||+|+|++++.||+++++.+...+ .+
T Consensus 334 tE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~~~~~~~~~ 411 (537)
T PLN02246 334 TEAGPVLAMCLAFAKEPFPVKSGSCGTVVRNAELKIVDPETGASLPRN--QPGEICIRGPQIMKGYLNDPEATANTIDKD 411 (537)
T ss_pred cccCcccccccccCCCCccccCCccccccCCcEEEEecCCCCCcCCCC--CceEEEEECCchhccccCCchhhhhcccCC
Confidence 999876543321 11234578999999999999994456666655 899999999999999999999998888 68
Q ss_pred CcccCCCC
Q 010774 493 GWFHTEVH 500 (501)
Q Consensus 493 gw~~TGD~ 500 (501)
|||+|||.
T Consensus 412 ~~~~TGD~ 419 (537)
T PLN02246 412 GWLHTGDI 419 (537)
T ss_pred CCeeecce
Confidence 99999995
No 31
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.8e-50 Score=418.05 Aligned_cols=392 Identities=23% Similarity=0.365 Sum_probs=325.4
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+++.++.+.|++.++.+|+++|+++. + +.+||+||.+++.++|+.|.+.|+++||+|+++++|++++++++
T Consensus 2 ~~~~~i~~~l~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~g~~V~l~~~~~~~~~~~~ 72 (513)
T PRK07656 2 NEWMTLPELLARAARRFGDKEAYVFG---D------QRLTYAELNARVRRAAAALAALGIGKGDRVAIWAPNSPHWVIAA 72 (513)
T ss_pred CccccHHHHHHHHHHHCCCCeEEEeC---C------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 45688999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
+||+++|++++|+++..+.+++..+++.+++++++++........... ........++......... ......
T Consensus 73 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~ 145 (513)
T PRK07656 73 LGALKAGAVVVPLNTRYTADEAAYILARGDAKALFVLGLFLGVDYSAT-TRLPALEHVVICETEEDDP------HTEKMK 145 (513)
T ss_pred HHHHhcCeEEEecCcccCHHHHHHHHhhcCceEEEEchhhHHHHHHHH-hccCCccEEEEEcCccccc------Cccccc
Confidence 999999999999999999999999999999999999987665543322 2233444554443322110 001224
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
.++++...............+++++++|||||||.||+|.++|.++...+..+...+ .+..++++++.+|++|.+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~ 220 (513)
T PRK07656 146 TFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYL-----GLTEGDRYLAANPFFHVF 220 (513)
T ss_pred cHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhh-----CCCCCCeEEEccchHHHH
Confidence 566666544222334445678999999999999999999999999998888776665 788999999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 280 g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
++.. ++.+++.|+++++.+. ++..+++.++++++|+++++|.+++.+++....
T Consensus 221 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------------- 275 (513)
T PRK07656 221 GYKAGVNAPLMRGATILPLPVFDPDEVFRLIETERITVLPGPPTMYNSLLQHPDR------------------------- 275 (513)
T ss_pred HHHHHHHHHHHcCceEEecCcCCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCc-------------------------
Confidence 9886 7889999999988765 899999999999999999999999998763111
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCC-CeeeeecccccCcceecccCCCCcc--
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNM-- 434 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~-- 434 (501)
...++ +++|.+++||+++++++.+.+.+.++. .+++.||+||++++++....+....
T Consensus 276 ------------~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~ 335 (513)
T PRK07656 276 ------------SAEDL--------SSLRLAVTGAASMPVALLERFESELGVDIVLTGYGLSEASGVTTFNRLDDDRKTV 335 (513)
T ss_pred ------------CCCCc--------cceeeEEecCCCCCHHHHHHHHHHcCCCceEeEEccccCCCceeecCcccccccc
Confidence 11112 389999999999999999999999988 8999999999988777655443322
Q ss_pred cCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc-cCcccCCCC
Q 010774 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-DGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~-dgw~~TGD~ 500 (501)
++++|+|+++++++|+| +++..++.+ +.|||+++|++++.||+++++.+...+. +|||+|||.
T Consensus 336 ~~~vG~~~~~~~~~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~tGDl 399 (513)
T PRK07656 336 AGTIGTAIAGVENKIVN-ELGEEVPVG--EVGELLVRGPNVMKGYYDDPEATAAAIDADGWLHTGDL 399 (513)
T ss_pred CCCccccCCCcEEEEEC-CCCCCCCCC--CceEEEEEcchhhhhhcCCHHHHhhhhccCCceeccce
Confidence 58999999999999999 888877765 8999999999999999999999888884 999999995
No 32
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-50 Score=421.33 Aligned_cols=396 Identities=20% Similarity=0.243 Sum_probs=302.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh
Q 010774 35 LLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 35 ~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 114 (501)
+..++..+.++.+.|.++++.+|+++|+++. ++. +.+||+||.++++++|+.|.+.|+++||+|+++++|+++
T Consensus 6 ~~~~~~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~e 78 (540)
T PRK05857 6 FQAMPQLPSTVLDRVFEQARQQPEAIALRRC---DGT----SALRYRELVAEVGGLAADLRAQSVSRGSRVLVISDNGPE 78 (540)
T ss_pred ccccccCCcchHHHHHHHHhhCCCcEEEeec---CCC----ceeeHHHHHHHHHHHHHHHHHhCcCCCCEEEEEcCCCHH
Confidence 4445567789999999999999999999865 432 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 115 WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
+++++|||+++|++++|+++.++.+++.++++.++++.+|++....... ....+....+. ++.++.....
T Consensus 79 ~~~~~lA~~~~G~v~v~l~~~~~~~~l~~~~~~~~~~~ii~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~-------- 148 (540)
T PRK05857 79 TYLSVLACAKLGAIAVMADGNLPIAAIERFCQITDPAAALVAPGSKMAS-SAVPEALHSIP-VIAVDIAAVT-------- 148 (540)
T ss_pred HHHHHHHHHHcCeEEEecCccCCHHHHHHHHHhcCCceEEEeccchhcc-ccccccccccc-eeEeeccccc--------
Confidence 9999999999999999999999999999999999999999988653211 11111111111 2222211100
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecC
Q 010774 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (501)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (501)
. ...+..... ..........+++++++|||||||.||||.++|.++.+........ .........+++++..+|
T Consensus 149 ~----~~~~~~~~~-~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~p 222 (540)
T PRK05857 149 R----ESEHSLDAA-SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKE-GLNWVTWVVGETTYSPLP 222 (540)
T ss_pred c----ccccccccc-ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhc-cccccccccCceeeecCC
Confidence 0 000000000 0111233456889999999999999999999999998765433211 011124556789999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 275 LAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
++|.+++...+.+++.|+++++.+.++..+++.++++++|.++++|.+++.+++....
T Consensus 223 ~~h~~~l~~~~~~l~~G~~~v~~~~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~---------------------- 280 (540)
T PRK05857 223 ATHIGGLWWILTCLMHGGLCVTGGENTTSLLEILTTNAVATTCLVPTLLSKLVSELKS---------------------- 280 (540)
T ss_pred ccccchHHHHHHHhhcceeEEecCCChhHHHHHHHhcCcceEEeChHHHHHHHhcccc----------------------
Confidence 9999998888889999999887666899999999999999999999999988753210
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC---
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--- 431 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~--- 431 (501)
...++ +++|.+++||++++....+ +.+.+++++++.||+||++..+...+.+.
T Consensus 281 ---------------~~~~~--------~~lr~~~~gG~~~~~~~~~-~~~~~g~~i~~~YG~TE~~~~~~~~~~~~~~~ 336 (540)
T PRK05857 281 ---------------ANATV--------PSLRLVGYGGSRAIAADVR-FIEATGVRTAQVYGLSETGCTALCLPTDDGSI 336 (540)
T ss_pred ---------------CCCcC--------ccceEEEEcCccCCchhHH-HHHHhCCeeecccCCCcCCceeeecccccccc
Confidence 01112 3899999999999887775 44567999999999999986544332221
Q ss_pred -CcccCcccccccCeEEEEeecCCCCc-cCC---CCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 432 -FNMIGTVGVPMTTVEARLESVPEMGY-DAL---SSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 432 -~~~~~s~G~p~p~~~i~I~d~~~~~~-~~~---~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
...++++|+|++|++++|+| +++.. .+. ..++.|||+|+|++++.|||++++.+.+.|.||||+|||.
T Consensus 337 ~~~~~~~~G~~~~g~~v~i~d-~~~~~~~~~~~~~~~~~Gel~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl 409 (540)
T PRK05857 337 VKIEAGAVGRPYPGVDVYLAA-TDGIGPTAPGAGPSASFGTLWIKSPANMLGYWNNPERTAEVLIDGWVNTGDL 409 (540)
T ss_pred cccccCCcCcccCCcEEEEEC-ccccCccccccCCCCCcceEEEeCcchhhhhhCCccchhhhcCCCceeccce
Confidence 12358999999999999999 77653 221 2247899999999999999999999999899999999995
No 33
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-49 Score=417.34 Aligned_cols=397 Identities=21% Similarity=0.341 Sum_probs=307.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
...|+.+.|++.++.+|+++|+++. + +.+||+||.++++++|+.|.+ .|+++||+|+++++|++++++++
T Consensus 22 ~~~~~~~~l~~~a~~~p~~~al~~~----~-----~~~Ty~el~~~~~~la~~L~~~~gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 22 EYPNIQAVLKQSCQRFADKPAFSNL----G-----KTLTYGELYKLSGAFAAWLQQHTDLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred ccCcHHHHHHHHHHhCCCCeeEEEC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 3468999999999999999999864 2 479999999999999999997 69999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCC--h-hhHHHhh----
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS--S-SQKKEAE---- 192 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~-~~~~~~~---- 192 (501)
|||+++|++++|++|.++.+++.++++.++++++|++.+....+.+.... ...+.++...... . .......
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKALVCLANMAHLAEKVLPK--TGVKHVIVTEVADMLPPLKRLLINAVVK 170 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHHHHHHHhccCceEEEEecchhhhHHHhhhc--cCcceeEEecccccccchhhhhcccchh
Confidence 99999999999999999999999999999999999987665443322211 1223333221100 0 0000000
Q ss_pred -------h-cCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC
Q 010774 193 -------E-LGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC 263 (501)
Q Consensus 193 -------~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~ 263 (501)
. .......+.+.+... ..........++++++|+|||||||.||+|.++|.+++.........+. ...
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~---~~~ 247 (562)
T PRK05677 171 HVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMG---SNL 247 (562)
T ss_pred hccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhc---cCC
Confidence 0 001123344444332 1111223345789999999999999999999999999887665443320 012
Q ss_pred C-CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 264 S-EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 264 ~-~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
. ..+.+++.+|++|.+++.. ++..+..|+++++.+. ++..+++.++++++|+++++|+++..+++.
T Consensus 248 ~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~---------- 317 (562)
T PRK05677 248 NEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISNPRDLPAMVKELGKWKFSGFVGLNTLFVALCNN---------- 317 (562)
T ss_pred CCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecCcccHHHHHHHHHHcCceEEecHHHHHHHHHhC----------
Confidence 2 3478899999999999875 6677888888777653 889999999999999999999999887651
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccc
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTE 419 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE 419 (501)
....+.++ +++|.+++||+++++++.+.|++.+++++++.||+||
T Consensus 318 ---------------------------~~~~~~~~--------~~lr~v~~gG~~~~~~~~~~~~~~~~~~v~~~YG~tE 362 (562)
T PRK05677 318 ---------------------------EAFRKLDF--------SALKLTLSGGMALQLATAERWKEVTGCAICEGYGMTE 362 (562)
T ss_pred ---------------------------cccccCCh--------hhceEEEEcCccCCHHHHHHHHHHcCCCeeccCCccc
Confidence 11111122 2799999999999999999999988999999999999
Q ss_pred cCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCC
Q 010774 420 SCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTE 498 (501)
Q Consensus 420 ~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG 498 (501)
++.+++....+ ...++++|+|+|+++++|+| +++.+++.| +.|||+|+|+.++.||+++++.+++.| .+|||+||
T Consensus 363 ~~~~~~~~~~~-~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~TG 438 (562)
T PRK05677 363 TSPVVSVNPSQ-AIQVGTIGIPVPSTLCKVID-DDGNELPLG--EVGELCVKGPQVMKGYWQRPEATDEILDSDGWLKTG 438 (562)
T ss_pred cCcceeecCcc-CCCCCccCccCCCCEEEEEC-CCCCCCCCC--CCeEEEEecCccchhhcCCchhhhhccCCCCccccc
Confidence 98776654433 23458899999999999999 888877766 899999999999999999999999888 68999999
Q ss_pred CC
Q 010774 499 VH 500 (501)
Q Consensus 499 D~ 500 (501)
|.
T Consensus 439 Dl 440 (562)
T PRK05677 439 DI 440 (562)
T ss_pred ce
Confidence 95
No 34
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=9.6e-50 Score=414.81 Aligned_cols=394 Identities=25% Similarity=0.378 Sum_probs=331.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.++|.++++.+|+++|+.+. + +.+||+||+++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 3 ~~~~~l~~~l~~~~~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~g~~~~~~V~l~~~~~~~~~~~~ 73 (521)
T PRK06187 3 DYPLTIGRILRHGARKHPDKEAVYFD---G------RRTTYAELDERVNRLANALRALGVKKGDRVAVFDWNSHEYLEAY 73 (521)
T ss_pred cccCCHHHHHHHHHHHCCCceEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999999999999999999876 4 35999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
+||+++|++++|+++.++.+++..+++.++++.++++.+....+.+... ....++.++.+++.... .......
T Consensus 74 la~~~~G~~~v~~~~~~~~~~~~~~i~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~ 146 (521)
T PRK06187 74 FAVPKIGAVLHPINIRLKPEEIAYILNDAEDRVVLVDSEFVPLLAAILP-QLPTVRTVIVEGDGPAA------PLAPEVG 146 (521)
T ss_pred HHHHHcCeEEEecccCCCHHHHHHHHHhcCCeEEEEcchHHHHHHHHhh-ccCCccEEEEecCcccc------ccccccc
Confidence 9999999999999999999999999999999999999887766544332 23445566665543311 1122345
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
.+.+++..............+++++++|||||||.||+|.++|.++..........+ .+..+|++++.+|++|.+
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~ 221 (521)
T PRK06187 147 EYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWL-----KLSRDDVYLVIVPMFHVH 221 (521)
T ss_pred cHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhh-----CCCCCCEEEEeCCchHHh
Confidence 666666554333334455678899999999999999999999999998888766655 788999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
++...+.++..|+++++.+. ++..+++.++++++|.++++|++++.+++....
T Consensus 222 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~-------------------------- 275 (521)
T PRK06187 222 AWGLPYLALMAGAKQVIPRRFDPENLLDLIETERVTFFFAVPTIWQMLLKAPRA-------------------------- 275 (521)
T ss_pred hHHHHHHHHHhCCEEEecCCCCHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCC--------------------------
Confidence 99887779999999998875 899999999999999999999999998763211
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCC-----c
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF-----N 433 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~-----~ 433 (501)
...++ +++|.+++||+++++++.+.+.+.+++++++.||+||+++++........ .
T Consensus 276 -----------~~~~~--------~~l~~v~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 336 (521)
T PRK06187 276 -----------YFVDF--------SSLRLVIYGGAALPPALLREFKEKFGIDLVQGYGMTETSPVVSVLPPEDQLPGQWT 336 (521)
T ss_pred -----------CccCc--------chhhEEEEcCcCCCHHHHHHHHHHhCcchheeeccCccCcccccCCcccccccccc
Confidence 11122 37999999999999999999999889999999999999887665544332 2
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
..+++|+|+++++++|+| +++.+++.+.++.|||+++|++++.||+++++.+.+.|.+|||+|||.
T Consensus 337 ~~~~~G~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~~~~~tGD~ 402 (521)
T PRK06187 337 KRRSAGRPLPGVEARIVD-DDGDELPPDGGEVGEIIVRGPWLMQGYWNRPEATAETIDGGWLHTGDV 402 (521)
T ss_pred cCCccccccCCeEEEEEC-CCCCCCCCCCCCeeEEEEECcchhhhhcCCHHHHHHHhhCCceeccce
Confidence 558999999999999999 888888875469999999999999999999999999898999999995
No 35
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.1e-49 Score=416.46 Aligned_cols=395 Identities=23% Similarity=0.334 Sum_probs=316.4
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+..++.+.|.+.++.+|+++|+++. + +.+||+||.+++.++|+.|.+. |+++||+|+++++|++++++++
T Consensus 8 ~~~tl~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~v~~~a~~L~~~~g~~~g~~V~i~~~~~~~~~~~~ 78 (546)
T PRK08314 8 PETSLFHNLEVSARRYPDKTAIVFY---G------RAISYRELLEEAERLAGYLQQECGVRKGDRVLLYMQNSPQFVIAY 78 (546)
T ss_pred CCCCHHHHHHHHHHHcCCCcceeec---C------ceecHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCChHHHHHH
Confidence 3568999999999999999999875 3 4799999999999999999999 9999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhH-------HH--
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-------KE-- 190 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-------~~-- 190 (501)
|||+++|++++|++|..+.+++..+++.++++.++++.+....+....... .+..++.......... .+
T Consensus 79 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (546)
T PRK08314 79 YAILRANAVVVPVNPMNREEELAHYVTDSGARVAIVGSELAPKVAPAVGNL--RLRHVIVAQYSDYLPAEPEIAVPAWLR 156 (546)
T ss_pred HHHHHcCcEEeecCcCcCHHHHHHHHHhCCCeEEEEccchhhhHHHHhhcc--CcceEEEecchhhcccccccCcccccc
Confidence 999999999999999999999999999999999999987766554332221 2223332211000000 00
Q ss_pred -----hhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCC
Q 010774 191 -----AEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE 265 (501)
Q Consensus 191 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~ 265 (501)
.......+..+++...... .........+++++|+|||||||.||+|.++|.+++..+......+ .+..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~ 230 (546)
T PRK08314 157 AEPPLQALAPGGVVAWKEALAAGL-APPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWS-----NSTP 230 (546)
T ss_pred cccccccccccccccHHHHhcccC-CCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCC
Confidence 0000112345555554321 1223344678999999999999999999999999999888766555 6788
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHH
Q 010774 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKK 343 (501)
Q Consensus 266 ~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 343 (501)
+|++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..++..
T Consensus 231 ~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~-------------- 296 (546)
T PRK08314 231 ESVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPRWDREAAARLIERYRVTHWTNIPTMVVDFLAS-------------- 296 (546)
T ss_pred CceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCCCCHHHHHHHHHHhcCceecccHHHHHHHHhC--------------
Confidence 999999999999999875 7789999999999875 899999999999999999999999887641
Q ss_pred HHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcc
Q 010774 344 LFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG 423 (501)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 423 (501)
+.....+++ ++|.+++||+++++++.+++.+.++.++++.||+||++..
T Consensus 297 -----------------------~~~~~~~~~--------~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~ 345 (546)
T PRK08314 297 -----------------------PGLAERDLS--------SLRYIGGGGAAMPEAVAERLKELTGLDYVEGYGLTETMAQ 345 (546)
T ss_pred -----------------------CCccccCch--------hhheeeeccccCCHHHHHHHHHHcCCcEEecccccccccc
Confidence 111222232 7899999999999999999999899999999999999887
Q ss_pred eecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc--c--CcccCCC
Q 010774 424 CFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--D--GWFHTEV 499 (501)
Q Consensus 424 ~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~--d--gw~~TGD 499 (501)
+.....+.. ..+++|+|++|++++|+|.+++..++.+ +.|||+|+|++++.||+++++.+.+.|. + +||+|||
T Consensus 346 ~~~~~~~~~-~~~~~G~~~~g~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~TGD 422 (546)
T PRK08314 346 THSNPPDRP-KLQCLGIPTFGVDARVIDPETLEELPPG--EVGEIVVHGPQVFKGYWNRPEATAEAFIEIDGKRFFRTGD 422 (546)
T ss_pred eecCCCcCC-CCCccCcccCCeEEEEEeCCCCcCCCCC--CceEEEEECCchhccccCChhHhhhhhhhcCCCceEecCC
Confidence 665544332 3478999999999999994456666655 8999999999999999999999888772 3 5999999
Q ss_pred C
Q 010774 500 H 500 (501)
Q Consensus 500 ~ 500 (501)
.
T Consensus 423 l 423 (546)
T PRK08314 423 L 423 (546)
T ss_pred E
Confidence 5
No 36
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=7.5e-50 Score=416.07 Aligned_cols=380 Identities=19% Similarity=0.215 Sum_probs=305.9
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|.++++++|+++|+++. + +.+||.||.++++++|++|.++|+++||+|+++++|++++++++|||
T Consensus 43 ~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~A~~L~~~g~~~g~~V~i~~~n~~~~~~~~lA~ 113 (537)
T PRK13382 43 MGPTSGFAIAAQRCPDRPGLIDE---L------GTLTWRELDERSDALAAALQALPIGEPRVVGIMCRNHRGFVEALLAA 113 (537)
T ss_pred CCHHHHHHHHHHhCCCCeEEEeC---C------CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEecCcHHHHHHHHHH
Confidence 57999999999999999999864 3 37999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++.++.+++.++++.++++++|++.+....+...... ......++.+.+... ...++
T Consensus 114 ~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~------------~~~~~ 180 (537)
T PRK13382 114 NRIGADILLLNTSFAGPALAEVVTREGVDTVIYDEEFSATVDRALAD-CPQATRIVAWTDEDH------------DLTVE 180 (537)
T ss_pred HHcCcEEEecCcccCHHHHHHHHHhcCCCEEEEchhhHHHHHHHHhh-ccccceEEEecCCcc------------cccHH
Confidence 99999999999999999999999999999999998765544332211 112223333322110 11333
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
.+....... ......++.++++|||||||.||||.++|.+++.....+...+ .+..+++++...|++|.+++.
T Consensus 181 ~~~~~~~~~--~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~g~~ 253 (537)
T PRK13382 181 VLIAAHAGQ--RPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRT-----PWRAEEPTVIVAPMFHAWGFS 253 (537)
T ss_pred HHhhccCcC--CCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhh-----CCCCCCeEEEecChHhhhHHH
Confidence 333322111 1122457789999999999999999999998888777655544 667889999999999999997
Q ss_pred HHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC
Q 010774 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (501)
Q Consensus 283 ~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (501)
..+.++..|+++++... ++..+++.++++++|++.++|++++.+++....
T Consensus 254 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~----------------------------- 304 (537)
T PRK13382 254 QLVLAASLACTIVTRRRFDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAE----------------------------- 304 (537)
T ss_pred HHHHHHhcCcEEEECCCcCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCch-----------------------------
Confidence 78889999999988764 899999999999999999999999998752100
Q ss_pred CCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCccccc
Q 010774 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (501)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p 441 (501)
..+..++ .++|.+++||+++++++.+.|.+.++..+++.||+||++.+++.........++++|+|
T Consensus 305 ------~~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~vG~p 370 (537)
T PRK13382 305 ------VRNRYSG--------RSLRFAAASGSRMRPDVVIAFMDQFGDVIYNNYNATEAGMIATATPADLRAAPDTAGRP 370 (537)
T ss_pred ------hcccCCc--------cceeEEEEcCCCCCHHHHHHHHHHcCCcEEecccccccCcceecChhHhccCCCCcccc
Confidence 0111112 27999999999999999999999999999999999999987665443333456899999
Q ss_pred ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 442 ~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++++++|+| +++++++.| +.|||+++|++++.||+ ++.+.. +.+|||+|||.
T Consensus 371 ~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~~~~gY~--~~~~~~-~~~g~~~TGDl 423 (537)
T PRK13382 371 AEGTEIRILD-QDFREVPTG--EVGTIFVRNDTQFDGYT--SGSTKD-FHDGFMASGDV 423 (537)
T ss_pred CcCcEEEEEC-CCCCCCCCC--CeeEEEEEcCCcccCcc--ccchhh-ccCCCEeeCce
Confidence 9999999999 888877765 89999999999999998 444443 45899999995
No 37
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.6e-50 Score=425.52 Aligned_cols=404 Identities=18% Similarity=0.170 Sum_probs=305.4
Q ss_pred cccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCC---CCCccEEeeHHHHHHHHHHHHHHHHhCCCCC
Q 010774 25 VYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNP 101 (501)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~---~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~ 101 (501)
.|.+...+...... ....++.++|+++++.+|+++|+++. +. ..+..+.+||+||.++++++|++|.+. +++
T Consensus 4 ~~~~~~~~~~~~~~-~~~~~l~~~l~~~a~~~~~~~a~~~~---~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~-~~~ 78 (631)
T PRK07769 4 AFHNPFDVNGKIRF-PPNTNLVRHVERWAKVRGDKLAYRFL---DFSTERDGVARDLTWSQFGARNRAVGARLQQV-TKP 78 (631)
T ss_pred ccCCcccccccccc-cccCCHHHHHHHHHHhCCCCeEEEEe---ccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh-cCC
Confidence 34455555444433 34568999999999999999999875 31 123346899999999999999999987 899
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEe-cCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-CCccEE
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTI 177 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~~~v 177 (501)
||+|+++++|++++++++|||+++|++++|+ ++..+ .+++.++++.++++++|++.+....+........ .....+
T Consensus 79 gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~ 158 (631)
T PRK07769 79 GDRVAILAPQNLDYLIAFFGALYAGRIAVPLFDPAEPGHVGRLHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRV 158 (631)
T ss_pred CCEEEEEcCCChHHHHHHHHHHHcCCEEEeeCCCCccchHHHHHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceE
Confidence 9999999999999999999999999999999 45554 6789999999999999998876544322211110 011223
Q ss_pred EEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeee
Q 010774 178 VSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (501)
Q Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~ 257 (501)
+.++.... .. ..........++++++|+|||||||.||||++||+++......+...+
T Consensus 159 ~~~~~~~~------------------~~---~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~- 216 (631)
T PRK07769 159 IAVDAVPD------------------EV---GATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDAL- 216 (631)
T ss_pred EEcccccc------------------cc---ccccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHc-
Confidence 32221100 00 001111234568999999999999999999999999998877765555
Q ss_pred eccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcC---cEEEecchHHHHHHHH
Q 010774 258 VTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKP---TMFSGVPRVYDRIYTG 329 (501)
Q Consensus 258 ~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~---t~~~~~P~~~~~l~~~ 329 (501)
.+..+|++++.+|++|.+|+..++.+++.|+++++... ++..+++.++++++ +.+.++|.++..+.+.
T Consensus 217 ----~~~~~d~~l~~~Pl~h~~gl~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~ 292 (631)
T PRK07769 217 ----EGQEGDRGVSWLPFFHDMGLITVLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAA 292 (631)
T ss_pred ----CCCCcceEEEeCCCcCchhhHHHHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHh
Confidence 67789999999999999999877778888999988742 88899999999986 7899999988766531
Q ss_pred HHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh--
Q 010774 330 ISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-- 407 (501)
Q Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-- 407 (501)
.. . .......++++ ++|.+++||+++++++.++|.+.|
T Consensus 293 ~~--~------------------------------~~~~~~~~~l~--------~lr~~~~gg~~l~~~~~~~~~~~~~~ 332 (631)
T PRK07769 293 RG--L------------------------------PKDGEPPLDLS--------NVKGLLNGSEPVSPASMRKFNEAFAP 332 (631)
T ss_pred hc--c------------------------------chhcccCcchh--------heeeEEeccCCCCHHHHHHHHHHHhh
Confidence 00 0 00000122333 899999999999999999999987
Q ss_pred -C---CCeeeeecccccCcceecccCCCC--------------------------cccCcccccccCeEEEEeecCCCCc
Q 010774 408 -G---APLTQGYGLTESCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPEMGY 457 (501)
Q Consensus 408 -~---~~l~~~yG~tE~~~~~~~~~~~~~--------------------------~~~~s~G~p~p~~~i~I~d~~~~~~ 457 (501)
| ..+++.||+||++.+++....+.. ....++|+|+++++++|+|.+++++
T Consensus 333 ~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~~~~~~~ivd~~~g~~ 412 (631)
T PRK07769 333 YGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVGVSEWAVIVDPETASE 412 (631)
T ss_pred cCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcCCCcEEEEEcCCCCcC
Confidence 3 359999999999876654432210 0125899999999999999445666
Q ss_pred cCCCCCCCceEEEecCCccccccCCcccchhhhc------------------cCcccCCCCC
Q 010774 458 DALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV------------------DGWFHTEVHR 501 (501)
Q Consensus 458 ~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~------------------dgw~~TGD~~ 501 (501)
++.| ++|||||+|++++.|||++++.|++.|. +|||+|||.+
T Consensus 413 ~~~g--e~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg 472 (631)
T PRK07769 413 LPDG--QIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYG 472 (631)
T ss_pred CCCC--CEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccc
Confidence 6655 8999999999999999999999988873 4899999964
No 38
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-49 Score=409.13 Aligned_cols=366 Identities=15% Similarity=0.175 Sum_probs=302.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
+++.+.|+++++.+|+++|+++. + ..+||.||.++++++|++|.+.|. +||+|+|+++|++++++++|||
T Consensus 1 ~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~~~-~~~~v~i~~~~~~~~~~~~la~ 70 (487)
T PRK07638 1 MGITKEYKKHASLQPNKIAIKEN---D------RVLTYKDWFESVCKVANWLNEKES-KNKTIAILLENRIEFLQLFAGA 70 (487)
T ss_pred CChHHHHHHHHHhCCCCeEEecC---C------cEeeHHHHHHHHHHHHHHHHHhCC-CCCEEEEEcCCCHHHHHHHHHH
Confidence 36889999999999999999865 3 489999999999999999999985 8999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++.++.+++.++++.++++.++++......+... ...++.+. .+.
T Consensus 71 ~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~-------~~~~~~~~------------------~~~ 125 (487)
T PRK07638 71 AMAGWTCVPLDIKWKQDELKERLAISNADMIVTERYKLNDLPDE-------EGRVIEID------------------EWK 125 (487)
T ss_pred HHcCeEEEecCccCCHHHHHHHHHhCCCCEEEEecccccchhhc-------cceEEEeh------------------hhh
Confidence 99999999999999999999999999999999998655443210 01122221 111
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
+................+++++|+|||||||.||+|+++|.+++..+......+ .+..+|+++...|++|..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~l~~~~~l~ 200 (487)
T PRK07638 126 RMIEKYLPTYAPIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDF-----HMKREDSVLIAGTLVHSLFLY 200 (487)
T ss_pred hhhhhccccccccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CcCCCCEEEEeecchHHHHHH
Confidence 111111111111222346789999999999999999999999998888766655 778899999999999998877
Q ss_pred HHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC
Q 010774 283 IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (501)
Q Consensus 283 ~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (501)
..+.+++.|+++++.+. ++..+++.++++++|+++++|++++.+.+..
T Consensus 201 ~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~------------------------------- 249 (487)
T PRK07638 201 GAISTLYVGQTVHLMRKFIPNQVLDKLETENISVMYTVPTMLESLYKEN------------------------------- 249 (487)
T ss_pred HHHHHHccCcEEEEcCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc-------------------------------
Confidence 78889999999998875 9999999999999999999999999987520
Q ss_pred CCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCcccCcccc
Q 010774 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGV 440 (501)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~ 440 (501)
. . ..+.+.++++|+++++++.+++.+.+ ++.+++.||+||++.++...........+++|+
T Consensus 250 -----~-~------------~~~~~~~~~~G~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~ 311 (487)
T PRK07638 250 -----R-V------------IENKMKIISSGAKWEAEAKEKIKNIFPYAKLYEFYGASELSFVTALVDEESERRPNSVGR 311 (487)
T ss_pred -----C-c------------CCceeEEEEcCCCCCHHHHHHHHHHcCCCeEEEEecCCccCceEEecccccCCCCCCCCc
Confidence 0 0 01455678899999999999999988 788999999999998766655444455689999
Q ss_pred cccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 441 PMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 441 p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
|+++++++|+| +++.+++.| +.|||+|+|+.++.||+++++.+.+.+.+|||+|||.
T Consensus 312 ~~~~~~~~i~d-~~g~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl 368 (487)
T PRK07638 312 PFHNVQVRICN-EAGEEVQKG--EIGTVYVKSPQFFMGYIIGGVLARELNADGWMTVRDV 368 (487)
T ss_pred ccCCcEEEEEC-CCCCCCCCC--CCeEEEEecccceeeecCCHHHHhhhccCCcEecCcc
Confidence 99999999999 888877765 8999999999999999999988877778999999995
No 39
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.2e-49 Score=408.08 Aligned_cols=364 Identities=24% Similarity=0.352 Sum_probs=303.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++.+.|++++..+|+++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 1 ~~~~~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (483)
T PRK03640 1 METMPNWLKQRAFLTPDRTAIEFE---E------KKVTFMELHEAVVSVAGKLAALGVKKGDRVALLMKNGMEMILVIHA 71 (483)
T ss_pred CCcHHHHHHHHHHhCCCceEEEeC---C------eeeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 468999999999999999999865 3 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++..+.+++..+++.++++.+++++........... ..+
T Consensus 72 ~~~~G~~~v~i~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~------------------------------~~~ 121 (483)
T PRK03640 72 LQQLGAVAVLLNTRLSREELLWQLDDAEVKCLITDDDFEAKLIPGIS------------------------------VKF 121 (483)
T ss_pred HHhCCcEEEecCcCCCHHHHHHHHHhCCCCEEEEcchhhHHHhhhcc------------------------------ccH
Confidence 99999999999999999999999999999999998765443311100 012
Q ss_pred HHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
+++.... ...........+++++++|||||||.||+|.++|.++...+......+ ++..+|++++.+|++|.++
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g 196 (483)
T PRK03640 122 AELMNGPKEEAEIQEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNL-----GLTEDDCWLAAVPIFHISG 196 (483)
T ss_pred HHHhhcccccCCCCCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhc-----CCCcCcEEEEecCHHHHHH
Confidence 2222221 111122234568899999999999999999999999988776655444 7789999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccC
Q 010774 281 QIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (501)
Q Consensus 281 ~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (501)
+..++.++..|+++++.+. ++..+++.++++++|++.++|++++.+.+.+.+.
T Consensus 197 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~-------------------------- 250 (483)
T PRK03640 197 LSILMRSVIYGMRVVLVEKFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG-------------------------- 250 (483)
T ss_pred HHHHHHHHhcCCEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc--------------------------
Confidence 9888899999999998876 9999999999999999999999999987522110
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceec-ccCCCCcccCcc
Q 010774 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFT-SLADVFNMIGTV 438 (501)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~-~~~~~~~~~~s~ 438 (501)
. ...++|.+++||+++++...+.+++. ++++++.||+||++..+.. ........++++
T Consensus 251 -----------~---------~~~~lr~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~v 309 (483)
T PRK03640 251 -----------T---------YPSSFRCMLLGGGPAPKPLLEQCKEK-GIPVYQSYGMTETASQIVTLSPEDALTKLGSA 309 (483)
T ss_pred -----------c---------cCCcceEEEEcCCCCCHHHHHHHHHh-CCCeeeeeccCcccccccccCcccccccCCCc
Confidence 0 01389999999999999999988875 9999999999998765433 333234456899
Q ss_pred cccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 439 G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
|+|+++++++|.+ ++ .+++.+ +.|||+|+|++++.||+++++.++..|.+|||+|||.
T Consensus 310 G~p~~~~~~~i~~-~~-~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~tGDl 367 (483)
T PRK03640 310 GKPLFPCELKIEK-DG-VVVPPF--EEGEIVVKGPNVTKGYLNREDATRETFQDGWFKTGDI 367 (483)
T ss_pred ccccCCcEEEEec-CC-CcCCCC--CceEEEEECcchhhhhcCCHHHHHHHHhcCCeeccce
Confidence 9999999999998 54 555544 8999999999999999999999999899999999995
No 40
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-49 Score=422.27 Aligned_cols=398 Identities=17% Similarity=0.184 Sum_probs=304.3
Q ss_pred HHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHh
Q 010774 45 PWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNS 124 (501)
Q Consensus 45 l~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~ 124 (501)
..++|+++++.+|+++|+++. +..++..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++|||++
T Consensus 55 ~~~~l~~~~~~~p~~~A~~~~---~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA~~~ 131 (629)
T PRK10524 55 CHNAVDRHLAKRPEQLALIAV---STETDEERTYTFRQLHDEVNRMAAMLRSLGVQRGDRVLIYMPMIAEAAFAMLACAR 131 (629)
T ss_pred HHHHHHHhhccCCCCeEEEEE---cCCCCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 467788888889999999986 43334457899999999999999999999999999999999999999999999999
Q ss_pred cCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 125 QAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 125 ~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
+|++++|++|.++.+++..+++.++++++|+++... +.+.+...........++.+....... ....
T Consensus 132 ~Gav~v~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~----~~~~ 207 (629)
T PRK10524 132 IGAIHSVVFGGFASHSLAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAPM----ARVA 207 (629)
T ss_pred hCcEEEeeCCCCCHHHHHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCCc----Cccc
Confidence 999999999999999999999999999999976421 122222111112234555554321100 0000
Q ss_pred ceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhh-cceeeeeccccCCCCcEEEEec
Q 010774 196 VSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSFL 273 (501)
Q Consensus 196 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~~ 273 (501)
.....++++..... ...+......+++++|+|||||||.||||+++|.+++..... +...+ ++..+|++++..
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~ 282 (629)
T PRK10524 208 GRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIF-----GGKAGETFFCAS 282 (629)
T ss_pred CCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhc-----CCCCCCEEEEcC
Confidence 01124555543321 112222345688999999999999999999999987654433 32233 677889999999
Q ss_pred ChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHH
Q 010774 274 PLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (501)
Q Consensus 274 pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (501)
|+.|..+... ++.+++.|+++++... ++..+++.++++++|+++++|++++.+.+..
T Consensus 283 ~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~----------------- 345 (629)
T PRK10524 283 DIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQD----------------- 345 (629)
T ss_pred CCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcC-----------------
Confidence 9999988764 7889999999998753 6889999999999999999999998876520
Q ss_pred HHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecc
Q 010774 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTS 427 (501)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 427 (501)
.....+++++ +||.+++||+++++++.+++.+.+++.+++.||+||++..+...
T Consensus 346 ------------------~~~~~~~~l~--------~lr~i~~~Ge~l~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~ 399 (629)
T PRK10524 346 ------------------PALLRKHDLS--------SLRALFLAGEPLDEPTASWISEALGVPVIDNYWQTETGWPILAI 399 (629)
T ss_pred ------------------cccccccChh--------heeEEEEeCCCCCHHHHHHHHHhcCCCeEeccccccccchhhcC
Confidence 0111223333 89999999999999999999998999999999999998543322
Q ss_pred cCC---CCcccCcccccccCeEEEEeecC-CCCccCCCCCCCceEEEecC---CccccccCCcccchhhh----ccCccc
Q 010774 428 LAD---VFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVI----VDGWFH 496 (501)
Q Consensus 428 ~~~---~~~~~~s~G~p~p~~~i~I~d~~-~~~~~~~~~~~~Gei~v~g~---~v~~gY~~~~~~~~~~~----~dgw~~ 496 (501)
... ....++++|+|+||++++|+| + ++++++.+ +.|||+|+|| +++.|||++++.+.+.+ .+|||+
T Consensus 400 ~~~~~~~~~~~~~~G~p~~g~~~~i~d-~~~g~~~~~g--~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 476 (629)
T PRK10524 400 ARGVEDRPTRLGSPGVPMYGYNVKLLN-EVTGEPCGPN--EKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSLFGRQVYS 476 (629)
T ss_pred CCCcccCcCCCCCcccCcCCceEEEEe-CCCCCCCCCC--CcEEEEEcCCCChhhcCCccCChHHHHHhhhccCCCcEEE
Confidence 211 123458999999999999999 7 88777655 8999999998 57899999998766544 468999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 477 TGDl 480 (629)
T PRK10524 477 TFDW 480 (629)
T ss_pred cCCc
Confidence 9996
No 41
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.4e-49 Score=416.09 Aligned_cols=382 Identities=19% Similarity=0.213 Sum_probs=294.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCC----CccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKV----GPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~----~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
.|+.+.|.+.++++|+++|+++. +..+ ...+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++
T Consensus 6 ~~~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~g~~~gd~V~~~~~n~~~~~~~ 82 (552)
T PRK09274 6 ANIARHLPRAAQERPDQLAVAVP---GGRGADGKLAYDELSFAELDARSDAIAHGLNAAGIGRGMRAVLMVTPSLEFFAL 82 (552)
T ss_pred hhHHHHHHHHHHhCCCcceEEec---cCCCCccccccCcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCcHHHHHH
Confidence 57889999999999999999875 3321 1234799999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC--ChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN--KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
+|||+++|++++|++|.++.+++.++++.++++++|++.+ ....+.... ......++.++... ..
T Consensus 83 ~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~---~~~~~~~i~~~~~~----------~~ 149 (552)
T PRK09274 83 TFALFKAGAVPVLVDPGMGIKNLKQCLAEAQPDAFIGIPKAHLARRLFGWG---KPSVRRLVTVGGRL----------LW 149 (552)
T ss_pred HHHHHHcCeEEEEcCCCccHHHHHHHHHhcCCCEEEeccHHHHHHHHhccC---ccchhheecccccc----------cc
Confidence 9999999999999999999999999999999999998752 111111110 01222233322110 00
Q ss_pred eEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh
Q 010774 197 SCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (501)
Q Consensus 197 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (501)
....++++.... ..........++++++|+|||||||.||+|.++|.++...+......+ .+..+|+.++.+|+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~pl 224 (552)
T PRK09274 150 GGTTLATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDY-----GIEPGEIDLPTFPL 224 (552)
T ss_pred CCccHHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHh-----CCCCCceeeeccCH
Confidence 112344443221 112223334678999999999999999999999999999888766655 67888999999999
Q ss_pred HHHHHHHHHHHHHhcCcEEEEec--------CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHH
Q 010774 276 AHIYDQIIETHCIHKGCSIGFWR--------GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (501)
Q Consensus 276 ~~~~g~~~~~~~l~~G~~~~~~~--------~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (501)
+|.+++ ..|+++++.. .++..+++.++++++|+++++|++++.+++.....
T Consensus 225 ~~~~~~-------~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-------------- 283 (552)
T PRK09274 225 FALFGP-------ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN-------------- 283 (552)
T ss_pred HHhhhh-------hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc--------------
Confidence 886543 4577777653 27899999999999999999999999988642111
Q ss_pred HHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh--CCCeeeeecccccCccee
Q 010774 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESCSGCF 425 (501)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~ 425 (501)
..++ +++|.+++||+++++++.+++++.+ |+++++.||+||++++++
T Consensus 284 -----------------------~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~ 332 (552)
T PRK09274 284 -----------------------GIKL--------PSLRRVISAGAPVPIAVIERFRAMLPPDAEILTPYGATEALPISS 332 (552)
T ss_pred -----------------------CCCC--------chhhEEEecCCcCCHHHHHHHHHHcCCCceEEccccccccceeEe
Confidence 1112 3799999999999999999999998 469999999999987665
Q ss_pred cccCC---------CCcccCcccccccCeEEEEeecCC---------CCccCCCCCCCceEEEecCCccccccCCcccch
Q 010774 426 TSLAD---------VFNMIGTVGVPMTTVEARLESVPE---------MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTE 487 (501)
Q Consensus 426 ~~~~~---------~~~~~~s~G~p~p~~~i~I~d~~~---------~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~ 487 (501)
..... ......++|+|+|+++++|+| ++ +++++. +++|||+|+|++++.|||++++.+.
T Consensus 333 ~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd-~~~~~~~~~~~~~~~~~--g~~Gel~v~g~~~~~GY~~~~~~t~ 409 (552)
T PRK09274 333 IESREILFATRAATDNGAGICVGRPVDGVEVRIIA-ISDAPIPEWDDALRLAT--GEIGEIVVAGPMVTRSYYNRPEATR 409 (552)
T ss_pred ecchhhhccccccccCCCCcccCccCCCceEEEEe-ccccccccccccccCCC--CCeeEEEEecCcccccccCChHHhh
Confidence 43321 011224799999999999998 43 344444 4899999999999999999999998
Q ss_pred hhh---ccC--cccCCCC
Q 010774 488 EVI---VDG--WFHTEVH 500 (501)
Q Consensus 488 ~~~---~dg--w~~TGD~ 500 (501)
..| .+| ||+|||.
T Consensus 410 ~~~~~~~~g~~w~~TGDl 427 (552)
T PRK09274 410 LAKIPDGQGDVWHRMGDL 427 (552)
T ss_pred hhhcccCCCCcEEEcCCE
Confidence 776 367 9999995
No 42
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.4e-51 Score=373.19 Aligned_cols=384 Identities=20% Similarity=0.243 Sum_probs=328.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..+|.++|..+|.++||++|+++. + +.|||+||.++++++|..|+++|+++||+|.+-+||..++++++||
T Consensus 27 d~~l~d~L~~~A~~~pdriAv~d~---~------~~~sY~eLdqr~d~LAa~l~~lGi~~Gd~vlvQLpN~~ef~~~~FA 97 (542)
T COG1021 27 DRTLTDILTDHAARYPDRIAVIDG---E------RRLSYAELDQRADRLAAGLRRLGIKPGDTVLVQLPNVAEFYITFFA 97 (542)
T ss_pred CCcHHHHHHHHHhhcCCceEEecC---c------ccccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCchHHHHHHHHH
Confidence 368999999999999999999964 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh----hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
++++|+.++.--|.....||.++.+.+.++.+|++.... ..+.+........++.+++.++....
T Consensus 98 LlrlGv~PVlALpsHr~~Ei~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~----------- 166 (542)
T COG1021 98 LLRLGVAPVLALPSHRASELGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHP----------- 166 (542)
T ss_pred HHHcCcchhhccchhhHHHHHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCc-----------
Confidence 999999999999999999999999999999999987432 23334444455778888887654321
Q ss_pred EeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 198 CFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 198 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
...+..+... ....+..+.+.+++++...+.||||.||.+..||..+..++....+.+ .++.++++++.+|..
T Consensus 167 -~~~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC-----~~~~~tvyL~~LP~A 240 (542)
T COG1021 167 -SVLEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEIC-----GFDQQTVYLCALPAA 240 (542)
T ss_pred -chhhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhh-----CcCccceEEEecccc
Confidence 1222233222 333445667788999999999999999999999999999999988888 899999999999999
Q ss_pred HHHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHh
Q 010774 277 HIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (501)
Q Consensus 277 ~~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (501)
|.+.+.. .+..++.|+++|+.+. ++......|+++++|+...+|.+...+++..+
T Consensus 241 HNfplssPG~LGv~~agG~VVla~~psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e---------------------- 298 (542)
T COG1021 241 HNFPLSSPGALGVFLAGGTVVLAPDPSPELCFPLIERHGVTVTALVPPLASLWLQAAE---------------------- 298 (542)
T ss_pred cCCCCCCcchhheeeeccEEEECCCCCHHHHHHHHHHhccceEEeccHHHHHHHHhhh----------------------
Confidence 9999885 8899999999999886 99999999999999999999999999887432
Q ss_pred hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-C
Q 010774 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-F 432 (501)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~ 432 (501)
.+..+++ |||.+-+||+.+++++.+++...+|+.+.+.|||.|.- ++....++. .
T Consensus 299 ---------------~~~~~Ls--------SLrllQVGGarl~~~~Arrv~~~lgC~LQQVFGMAEGL-vnyTRLDDp~E 354 (542)
T COG1021 299 ---------------WERADLS--------SLRLLQVGGARLSATLARRVPAVLGCQLQQVFGMAEGL-VNYTRLDDPPE 354 (542)
T ss_pred ---------------cccCCch--------heeEEeecCcccCHHHHhhchhhhCchHHHHhhhhhhh-hcccccCCchH
Confidence 2344454 99999999999999999999999999999999999954 344333333 2
Q ss_pred cccCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 433 NMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 433 ~~~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
....+-|+|+ |.-+++|+| +||+++++| |+|+|.+|||..++|||+.|+-|+++| .||+|+|||-
T Consensus 355 ~i~~TQGrPlsP~DEvrvvD-~dg~pv~pG--E~G~LltRGPYTirGYyrap~HNa~aF~a~GFYrsGD~ 421 (542)
T COG1021 355 IIIHTQGRPLSPDDEVRVVD-ADGNPVAPG--EVGELLTRGPYTIRGYYRAPEHNARAFDADGFYRSGDL 421 (542)
T ss_pred heeecCCCcCCCcceeEEec-CCCCCCCCC--CcceeeecCCeeeeeeccCchhhhhccCcCCceecCce
Confidence 3346789998 888999999 999988877 999999999999999999999999999 8999999994
No 43
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=6.6e-49 Score=409.56 Aligned_cols=388 Identities=21% Similarity=0.254 Sum_probs=309.5
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|+++++.+|+++|+++. +...+..+.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 22 ~~~~~~~~~~~~~~p~~~a~~~~---~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la~ 98 (538)
T TIGR03208 22 RTINDHFDAAVANCPDKPALTAY---RDGHGAVRRFSYRELDCRVDRIAVGLARLGVGRGDVVSFQLPNRWEFTALYLAC 98 (538)
T ss_pred CcHHHHHHHHHHHCCCceEEEee---cccCCCcceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 58999999999999999999864 222223468999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
+++|++++|++|.++.+++.++++.+++++++++..... ...+...........++..+... .
T Consensus 99 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~ 165 (538)
T TIGR03208 99 ARIGAVLNPLMPIFRERELSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDG-------------D 165 (538)
T ss_pred HhcCEEEeccCcccCHHHHHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCC-------------C
Confidence 999999999999999999999999999999999876421 11111112223334555543221 1
Q ss_pred eeHHHHHhcCC----CC----CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEE
Q 010774 199 FSWEEFLQLGT----LD----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (501)
Q Consensus 199 ~~~~~~~~~~~----~~----~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 270 (501)
..+++++.... .. .......++++++++|||||||.||+|+++|++++..+......+ .+..+|+++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~d~~l 240 (538)
T TIGR03208 166 DSFDRVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERL-----ELGGGDVIL 240 (538)
T ss_pred cCHHHHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhc-----CCCCCCeEE
Confidence 12222222110 00 111234568899999999999999999999999999888766655 677899999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
+.+|++|..++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.++..+.+......
T Consensus 241 ~~~pl~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~~-------------- 306 (538)
T TIGR03208 241 MASPMAHQTGFMYGLMMPLILNATAVLQDIWNPARAAELIRETGVTFTMASTPFLTDLCRAVKESG-------------- 306 (538)
T ss_pred EeCCchhHHHHHHHHHHHHHcCCEEEecCccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhccC--------------
Confidence 9999999998775 7889999999988765 89999999999999999999999988865321110
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceeccc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSL 428 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 428 (501)
.++ +++|.+++||+++++++.+++.+.+++.+++.||+||++.+++...
T Consensus 307 -----------------------~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~ 355 (538)
T TIGR03208 307 -----------------------APV--------PSLFTFLCAGAPIPGILVERAWELLGALIVSAWGMTENGAVTVTEP 355 (538)
T ss_pred -----------------------CCC--------CcceEEEEcCCCCCHHHHHHHHHHcCCeEEeeeccCcCCCccccCc
Confidence 011 3799999999999999999999988999999999999987765443
Q ss_pred CCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 429 ADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 429 ~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
... .....++|+|+||++++|+| +++.+++.+ +.|||+|+|+.++.||+++++.+.. ..+|||+|||.
T Consensus 356 ~~~~~~~~~~~G~~~~g~~v~i~~-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~-~~~~~~~TGD~ 424 (538)
T TIGR03208 356 DDALEKASTTDGRPLPGVEVKVID-ANGAKLSQG--ETGRLLVRGCSNFGGYLKRPHLNST-DAEGWFDTGDL 424 (538)
T ss_pred ccchhhccCcccccCCCCEEEEEC-CCCCCCcCC--CCcEEEEecCcccccccCCcccccc-cCCCceeccce
Confidence 322 12236799999999999999 888777655 8999999999999999999987653 36899999995
No 44
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=6.1e-49 Score=410.40 Aligned_cols=404 Identities=20% Similarity=0.286 Sum_probs=314.5
Q ss_pred CCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCC
Q 010774 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (501)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~ 100 (501)
..+.+|++.+++... +...|+.+.|.++++.+|+++|+.+. .+. +.+||+||.++++++|+.|.+.|++
T Consensus 10 ~~~~~~~~~~~~~~~----~~~~~~~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~la~~L~~~g~~ 78 (546)
T PLN02330 10 DNEHIFRSRYPSVPV----PDKLTLPDFVLQDAELYADKVAFVEA---VTG----KAVTYGEVVRDTRRFAKALRSLGLR 78 (546)
T ss_pred ccceeeccCCCCCCC----CCCCcHHHHHhhhhhcCCCccEEEec---CCC----CcccHHHHHHHHHHHHHHHHHhCCC
Confidence 345566666655321 34578999999999999999999864 221 4799999999999999999999999
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEe
Q 010774 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (501)
Q Consensus 101 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (501)
+||+|+++++|+++++++++||+++|++++|+++..+.+++.++++.++++++++++.....+... .. .++.+
T Consensus 79 ~g~~V~i~~~~~~~~~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~------~~-~~i~~ 151 (546)
T PLN02330 79 KGQVVVVVLPNVAEYGIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKLIVTNDTNYGKVKGL------GL-PVIVL 151 (546)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeEEEEccchhhhHhhc------CC-cEEEe
Confidence 999999999999999999999999999999999999999999999999999999998876655321 11 23333
Q ss_pred cCCChhhHHHhhhcCceEeeHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeee
Q 010774 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV 257 (501)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~ 257 (501)
..... .....+++++..... .........+++++++|||||||.||+|.++|.++...+.......
T Consensus 152 ~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~- 220 (546)
T PLN02330 152 GEEKI----------EGAVNWKELLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSV- 220 (546)
T ss_pred cCCCC----------CCcccHHHHHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhcc-
Confidence 32111 112345555543311 1112334568899999999999999999999999987765422111
Q ss_pred eccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhh
Q 010774 258 VTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (501)
Q Consensus 258 ~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (501)
.......++.+..+|++|.+++.. ++.++..|+++++... ++..+++.++++++|.+.++|.++..+++.
T Consensus 221 --~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------ 292 (546)
T PLN02330 221 --GPEMIGQVVTLGLIPFFHIYGITGICCATLRNKGKVVVMSRFELRTFLNALITQEVSFAPIVPPIILNLVKN------ 292 (546)
T ss_pred --CccccCceEEEEecChHHHHHHHHHHHHHhhcCCEEEEecccCHHHHHHHHHHcCCeeeecCCHHHHHHHhC------
Confidence 112334578899999999999874 7788999999988765 999999999999999999999999988752
Q ss_pred cCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeee
Q 010774 336 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQG 414 (501)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~ 414 (501)
+...++++.+ .++|.+++||+++++++.+++.+.| ++++++.
T Consensus 293 -------------------------------~~~~~~~~~~------~~l~~i~~~g~~l~~~~~~~~~~~~~~~~~~~~ 335 (546)
T PLN02330 293 -------------------------------PIVEEFDLSK------LKLQAIMTAAAPLAPELLTAFEAKFPGVQVQEA 335 (546)
T ss_pred -------------------------------ccccccccch------heeeeEEEcCCcCCHHHHHHHHHHcCCCeEEec
Confidence 1111222211 1589999999999999999999998 8999999
Q ss_pred ecccccCcceecccCCC----CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh
Q 010774 415 YGLTESCSGCFTSLADV----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (501)
Q Consensus 415 yG~tE~~~~~~~~~~~~----~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~ 490 (501)
||+||++.+........ ....+++|+|+|+++++|+|.+++..++.| +.|||+|+|++++.||+++++.+.+.+
T Consensus 336 YG~tE~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d~~~~~~~p~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~ 413 (546)
T PLN02330 336 YGLTEHSCITLTHGDPEKGHGIAKKNSVGFILPNLEVKFIDPDTGRSLPKN--TPGELCVRSQCVMQGYYNNKEETDRTI 413 (546)
T ss_pred ccccccccceecCCCccccccccccCccccccCCcEEEEEeCCCCccCCCC--CceEEEEecchhhhhhccCccchhhhc
Confidence 99999876543221111 123468999999999999994456666655 899999999999999999999998877
Q ss_pred -ccCcccCCCC
Q 010774 491 -VDGWFHTEVH 500 (501)
Q Consensus 491 -~dgw~~TGD~ 500 (501)
.+|||+|||.
T Consensus 414 ~~~g~~~TGD~ 424 (546)
T PLN02330 414 DEDGWLHTGDI 424 (546)
T ss_pred cCCCceecccE
Confidence 6899999995
No 45
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=6.2e-49 Score=410.75 Aligned_cols=387 Identities=21% Similarity=0.284 Sum_probs=310.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|++.++.+|+++|+++. ++ +.+||+||.++++++|++|++.|+++||+|+++++|+++++++++|
T Consensus 22 ~~~l~~~~~~~~~~~pd~~a~~~~---~~-----~~~Ty~~l~~~v~~la~~l~~~G~~~gd~V~i~~~n~~~~~~~~lA 93 (547)
T PRK06087 22 DASLADYWQQTARAMPDKIAVVDN---HG-----ASYTYSALDHAASRLANWLLAKGIEPGDRVAFQLPGWCEFTIIYLA 93 (547)
T ss_pred CCCHHHHHHHHHHHCCCceEEEcC---CC-----CEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 357999999999999999999864 33 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh-----hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI-----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~-----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
|+++|++++|++|..+.+++.++++.++++++++++... +.+... .........++.++..... .
T Consensus 94 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~---------~ 163 (547)
T PRK06087 94 CLKVGAVSVPLLPSWREAELVWVLNKCQAKMFFAPTLFKQTRPVDLILPL-QNQLPQLQQIVGVDKLAPA---------T 163 (547)
T ss_pred HHHcCcEEeccchhcCHHHHHHHHHhcCCeEEEEecccccccHHHHHHHH-HhhCCCCcEEEEeCCcCCC---------c
Confidence 999999999999999999999999999999999976431 112111 1122334455555432210 0
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
....+.++...............+++++|+|||||||.||+|.++|.+++.....+...+ .+..+|++++..|++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~ 238 (547)
T PRK06087 164 SSLSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARL-----NLTWQDVFMMPAPLG 238 (547)
T ss_pred CccCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeEEEecchH
Confidence 112344444332211122334578999999999999999999999999988877765555 678899999999999
Q ss_pred HHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 277 HIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
|.+++.. ++.+++.|+++++... ++..+++.++++++|.++.+|.++..+++.....
T Consensus 239 h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~--------------------- 297 (547)
T PRK06087 239 HATGFLHGVTAPFLIGARSVLLDIFTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ--------------------- 297 (547)
T ss_pred HHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC---------------------
Confidence 9999875 7788999999998875 9999999999999999998888777766422110
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-Cc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FN 433 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~~ 433 (501)
..++ +++|.+++||+++++++.+.+.+. ++++++.||+||++.+........ ..
T Consensus 298 ----------------~~~~--------~~lr~i~~gG~~~~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~ 352 (547)
T PRK06087 298 ----------------PADL--------SALRFFLCGGTTIPKKVARECQQR-GIKLLSVYGSTESSPHAVVNLDDPLSR 352 (547)
T ss_pred ----------------CCCC--------CCeEEEEEcCCCCCHHHHHHHHHc-CCcEEEEecccccCCccccCCCcchhh
Confidence 0111 389999999999999999988875 999999999999988765543322 22
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
..+++|+|+++++++|+| +++.+++.+ +.|||+++|++++.||+++++.+...+ .+|||+|||.
T Consensus 353 ~~~~~G~~~~~~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 417 (547)
T PRK06087 353 FMHTDGYAAAGVEIKVVD-EARKTLPPG--CEGEEASRGPNVFMGYLDEPELTARALDEEGWYYSGDL 417 (547)
T ss_pred cCCcCCccCCCceEEEEc-CCCCCCcCC--CcceEEEecccccccccCCHHHHHHHhCCCCCcCcCce
Confidence 346789999999999999 888877765 899999999999999999999988877 6899999995
No 46
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=4.9e-49 Score=409.52 Aligned_cols=385 Identities=18% Similarity=0.187 Sum_probs=306.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|+++++.+|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 22 ~~~l~~~~~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~la 92 (527)
T TIGR02275 22 DKPLTDILRDQAARYPDAIAIICG----N-----RQWSYRELDQRADNLAAGLTKLGIGQGDTAVVQLPNIAEFYIVFFA 92 (527)
T ss_pred CCcHHHHHHHHHHHCCCceEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 457999999999999999999864 2 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhh----hhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS----ILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
|+++|++++++++..+.+++.++++.++++.++++...... ..+...........++........
T Consensus 93 ~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 161 (527)
T TIGR02275 93 LLKLGIAPVLALFSHRKSELTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVE----------- 161 (527)
T ss_pred HHHcCeEEeccccccCHHHHHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCc-----------
Confidence 99999999999999999999999999999999998754211 111111112223333333221100
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHH
Q 010774 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
....+.+.............++++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|
T Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~P~~h 235 (527)
T TIGR02275 162 -AELFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----WLTQQTRYLCALPAAH 235 (527)
T ss_pred -chhhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCCEEEECCChHh
Confidence 0111112111111222345678999999999999999999999999998888766655 6788999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+++.....
T Consensus 236 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--------------------- 294 (527)
T TIGR02275 236 NYPLSSPGALGVFYAGGCVVLAPDPSPTDCFPLIERHKVTVTALVPPAVALWMQAASKS--------------------- 294 (527)
T ss_pred hhhhhHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHhCCeEEEecHHHHHHHHhCcccc---------------------
Confidence 998874 6788999999988764 8999999999999999999999998887532111
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 434 (501)
..++ +++|.+++||+++++++.+++.+.++.++++.||+||++.............
T Consensus 295 ----------------~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~ 350 (527)
T TIGR02275 295 ----------------RYDL--------SSLKLLQVGGAKFSEAAARRVPAVFGCQLQQVFGMAEGLVNYTRLDDPAEII 350 (527)
T ss_pred ----------------CCCc--------cceEEEEEcCCCCCHHHHHHHHHHhCCeEEeeeccCccCccccCCCCccccc
Confidence 0111 3899999999999999999999988999999999999654332211112233
Q ss_pred cCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 435 IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.+++|+|+ ++++++|+| ++++.++.| +.|||+++|+.++.||+++++.+.+.+ .||||+|||.
T Consensus 351 ~~~~G~~~~~~~~v~i~d-~~g~~~~~g--~~Gei~v~g~~~~~gY~~~~~~~~~~~~~dg~~~TGDl 415 (527)
T TIGR02275 351 FTTQGRPMSPDDEVRVVD-DHGNPVAPG--ETGMLLTRGPYTFRGYYKAPEHNAAAFDAEGFYYTGDL 415 (527)
T ss_pred cccCCCCCCCCceEEEEC-CCCCCCCCC--CceEEEecCCccchhhcCChhHhHhhcCcCCCEEcCce
Confidence 47899999 589999999 888877665 899999999999999999999998888 7899999995
No 47
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=6.2e-49 Score=408.12 Aligned_cols=393 Identities=21% Similarity=0.281 Sum_probs=312.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|++.++++|+++|+++. +. .+..+.+||.||.++++++|++|.++|+++||+|+++++|+.+++++++|
T Consensus 6 ~~~l~~~~~~~a~~~p~~~a~~~~---~~-~~~~~~~ty~~l~~~v~~la~~L~~~g~~~~~~v~i~~~n~~~~~~~~la 81 (517)
T PRK08008 6 GQHLRQMWDDLADVYGHKTALIFE---SS-GGVVRRYSYLELNEEINRTANLFYSLGIRKGDKVALHLDNCPEFIFCWFG 81 (517)
T ss_pred cccHHHHHHHHHHHCCCceEEEcc---cC-CCccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 368999999999999999999876 42 34457899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|+++++++|..+.+++.++++.++++.+|++.+..+.+.+.........+.++........ ......+
T Consensus 82 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~ 153 (517)
T PRK08008 82 LAKIGAIMVPINARLLREESAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPA--------DDGVSSF 153 (517)
T ss_pred HHHcCeEEEEcCcccCHHHHHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCcc--------cccccCH
Confidence 99999999999999999999999999999999999887665544433333344455554432110 0123344
Q ss_pred HHHHhcCCC-CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 202 EEFLQLGTL-DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 202 ~~~~~~~~~-~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
+++...... .....+...+++++++|||||||.||+|+++|.+++.......... .+..++++++.+|++|..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~ 228 (517)
T PRK08008 154 TQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQC-----ALRDDDVYLTVMPAFHIDC 228 (517)
T ss_pred HHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhc-----CCCCCCeEEEecCcHHHHH
Confidence 444332211 1112334568899999999999999999999999986543322111 4678899999999999877
Q ss_pred HHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 281 QII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 281 ~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
... ++.++..|+++++.+. ++..+++.++++++|++.++|.+++.++....
T Consensus 229 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~--------------------------- 281 (517)
T PRK08008 229 QCTAAMAAFSAGATFVLLEKYSARAFWGQVCKYRATITECIPMMIRTLMVQPP--------------------------- 281 (517)
T ss_pred HHHHHHHHHhcCcEEEEccccCHHHHHHHHHHcCCcEEechHHHHHHHHhCCC---------------------------
Confidence 765 7788999999999875 89999999999999999999999988764100
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcc
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTV 438 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~ 438 (501)
.+ .... ++++.+.++ .+++++..+.|.+.++.++++.||+||+++.++..........+++
T Consensus 282 -------~~---~~~~--------~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~ 342 (517)
T PRK08008 282 -------SA---NDRQ--------HCLREVMFY-LNLSDQEKDAFEERFGVRLLTSYGMTETIVGIIGDRPGDKRRWPSI 342 (517)
T ss_pred -------cc---cccc--------ccceeeEEe-cCCCHHHHHHHHHHhCCeEEeeccccccccccccCCccccccCCcc
Confidence 00 0001 257777765 4788999999999889999999999999876655444444445789
Q ss_pred cccccCeEEEEeecCCCCccCCCCCCCceEEEec---CCccccccCCcccchhhh-ccCcccCCCC
Q 010774 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRG---NTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 439 G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g---~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
|+|+++++++|+| +++.+++.+ +.|||+++| ++++.|||++++.+++.| .+|||+|||.
T Consensus 343 G~~~~g~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~~g~~~TGDl 405 (517)
T PRK08008 343 GRPGFCYEAEIRD-DHNRPLPAG--EIGEICIKGVPGKTIFKEYYLDPKATAKVLEADGWLHTGDT 405 (517)
T ss_pred ccCCCCcEEEEEC-CCCCCCCCC--CcceEEEeCCCCcchhhhHhCChHHHhhcccCCCCeeccce
Confidence 9999999999999 888877765 899999998 689999999999999888 6899999994
No 48
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.5e-49 Score=408.04 Aligned_cols=373 Identities=24% Similarity=0.323 Sum_probs=305.0
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..+.+.|+++++.+|+++|+++. + +.+||.||.++++++|++|.+ .|+.+||+|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~a~~~p~~~a~~~~----~-----~~~ty~~l~~~~~~la~~L~~~~g~~~~~~V~i~~~~~~~~~~~~la 72 (496)
T PRK06839 2 QGIAYWIEKRAYLHPDRIAIITE----E-----EEMTYKQLHEYVSKVAAYLIYELNVKKGERIAILSQNSLEYIVLLFA 72 (496)
T ss_pred ccHHHHHHHHHHHCCCCeEEEEC----C-----ceEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 46889999999999999999864 2 589999999999999999985 7999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++..+.+++..+++.++++.++++......+..... . .....++.+. ++
T Consensus 73 ~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~-~~~~~~~~~~------------------~~ 132 (496)
T PRK06839 73 IAKVECIAVPLNIRLTENELIFQLKDSGTTVLFVEKTFQNMALSMQK-V-SYVQRVISIT------------------SL 132 (496)
T ss_pred HHhcCcEEEecCcccCHHHHHHHHHhcCceEEEEcHHHHHHHHHhhh-c-cCcceEEEec------------------ch
Confidence 99999999999999999999999999999999998766544322211 1 1112222222 12
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
+++.... .........+++++|+|||||||.||+|.++|.++..........+ ....+|++++.+|++|.+|+
T Consensus 133 ~~~~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 205 (496)
T PRK06839 133 KEIEDRK--IDNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAI-----DLTMHDRSIVLLPLFHIGGI 205 (496)
T ss_pred HhhhccC--CCCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHc-----CCCCCCeEEEeeCCcchhhH
Confidence 2222211 1122334568899999999999999999999999877665544444 67789999999999999998
Q ss_pred HH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccC
Q 010774 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (501)
Q Consensus 282 ~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (501)
.. .+.++..|+++++.+. ++..+++.++++++|++.++|.+++.+++..
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----------------------------- 256 (496)
T PRK06839 206 GLFAFPTLFAGGVIIVPRKFEPTKALSMIEKHKVTVVMGVPTIHQALINCS----------------------------- 256 (496)
T ss_pred HHHHHHHHhcCcEEEEccCCCHHHHHHHHHhhCCeEEEehHHHHHHHHhCc-----------------------------
Confidence 75 6788999999988765 9999999999999999999999999987521
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccC-CCCcccCcc
Q 010774 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLA-DVFNMIGTV 438 (501)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~-~~~~~~~s~ 438 (501)
.....++ +++|.+++||+++++++.+.+++. |+++++.||+||++.+++.... +.....+++
T Consensus 257 --------~~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~ 319 (496)
T PRK06839 257 --------KFETTNL--------QSVRWFYNGGAPCPEELMREFIDR-GFLFGQGFGMTETSPTVFMLSEEDARRKVGSI 319 (496)
T ss_pred --------ccccCCC--------cccceEEECCCCCCHHHHHHHHHh-CCeeEeeccCCCCCcceEecccccccccCCCC
Confidence 0111112 389999999999999999999987 9999999999999876543322 223456899
Q ss_pred cccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 439 GVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 439 G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
|+|+++++++|+| +++..++.| +.|||+|+|++++.||+++++.+...+.+|||+|||.
T Consensus 320 G~p~~~~~~~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl 378 (496)
T PRK06839 320 GKPVLFCDYELID-ENKNKVEVG--EVGELLIRGPNVMKEYWNRPDATEETIQDGWLCTGDL 378 (496)
T ss_pred cccCCCceEEEEC-CCcCCCCCC--CceEEEEECCCcchhhcCChHHHHHHHcCCCeeecce
Confidence 9999999999999 888876655 8999999999999999999999988889999999995
No 49
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=5.5e-49 Score=413.31 Aligned_cols=397 Identities=25% Similarity=0.402 Sum_probs=312.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|+++++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++|
T Consensus 31 ~~~l~~~~~~~~~~~p~~~a~~~~---~------~~~Ty~ql~~~~~~~A~~L~~~gi~~gd~V~l~~~n~~~~~~~~lA 101 (573)
T PRK05605 31 DTTLVDLYDNAVARFGDRPALDFF---G------ATTTYAELGKQVRRAAAGLRALGVRPGDRVAIVLPNCPQHIVAFYA 101 (573)
T ss_pred cCCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHH
Confidence 358999999999999999999875 3 3799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhh---HH---------
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ---KK--------- 189 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~~--------- 189 (501)
|+++|++++|++|.++.+++.++++.++++++|+++.....+...... .....++.+....... ..
T Consensus 102 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 179 (573)
T PRK05605 102 VLRLGAVVVEHNPLYTAHELEHPFEDHGARVAIVWDKVAPTVERLRRT--TPLETIVSVNMIAAMPLLQRLALRLPIPAL 179 (573)
T ss_pred HHhcCcEEeecCcCCCHHHHHHHHhccCCcEEEechhhHHHHHhhhhc--cccceeEeeecccccccccccccccccccc
Confidence 999999999999999999999999999999999988765544332211 1222333322110000 00
Q ss_pred -----HhhhcCceEeeHHHHHhcCCCC----CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecc
Q 010774 190 -----EAEELGVSCFSWEEFLQLGTLD----CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (501)
Q Consensus 190 -----~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~ 260 (501)
...........++++....... ........+++++++|||||||.||+|.+||.+++..+......+..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~-- 257 (573)
T PRK05605 180 RKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKAWVPG-- 257 (573)
T ss_pred cccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHhhccc--
Confidence 0000112334566665442111 12233457899999999999999999999999998877653322200
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 261 ~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
....++++++..|++|.+|+.. ++.+++.|+++++.+. ++..+++.++++++|.+.++|.+++.+++....
T Consensus 258 -~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~------ 330 (573)
T PRK05605 258 -LGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPAPDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAEE------ 330 (573)
T ss_pred -cCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCEEEEchHHHHHHHHhCccc------
Confidence 1234789999999999999875 6678999999988775 999999999999999999999999998763211
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeeccc
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLT 418 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~t 418 (501)
...++ +++|.+++||+++++++.+++.+.++..+++.||+|
T Consensus 331 -------------------------------~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~~~~i~~~YG~T 371 (573)
T PRK05605 331 -------------------------------RGVDL--------SGVRNAFSGAMALPVSTVELWEKLTGGLLVEGYGLT 371 (573)
T ss_pred -------------------------------cCCCc--------hhccEEEECCCcCCHHHHHHHHHHhCCCeecccccc
Confidence 11112 279999999999999999999998899999999999
Q ss_pred ccCcceecccCCCCcccCcccccccCeEEEEeecCCC--CccCCCCCCCceEEEecCCccccccCCcccchhhhccCccc
Q 010774 419 ESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEM--GYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFH 496 (501)
Q Consensus 419 E~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~--~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~ 496 (501)
|++++++.........++++|+|+||++++|+| +++ ..++.+ +.|||+++|+.++.||+++++.+.+.|.+|||+
T Consensus 372 E~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~ 448 (573)
T PRK05605 372 ETSPIIVGNPMSDDRRPGYVGVPFPDTEVRIVD-PEDPDETMPDG--EEGELLVRGPQVFKGYWNRPEETAKSFLDGWFR 448 (573)
T ss_pred hhchhhhcCCcccCCcCCccccCCCCCEEEEEc-CCCCCccCCCC--CeeEEEEecCchhhhhcCChhHhhhcccCCCcc
Confidence 999877665544444568999999999999999 664 445444 899999999999999999999999888889999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 449 TGD~ 452 (573)
T PRK05605 449 TGDV 452 (573)
T ss_pred cCCE
Confidence 9995
No 50
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.8e-48 Score=409.36 Aligned_cols=405 Identities=19% Similarity=0.266 Sum_probs=317.1
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhH
Q 010774 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEW 115 (501)
Q Consensus 37 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~ 115 (501)
.+.+.+.|+.++|++++..+|+++|+++. +. ..+.+||+||.++++++|++|.+ .|+++||+|+++++|++++
T Consensus 4 ~~~~~~~~~~~~l~~~a~~~~~~~a~~~~---~~---~~~~~Ty~el~~~~~~la~~L~~~~g~~~gd~V~~~~~n~~e~ 77 (576)
T PRK05620 4 TMQDVPLSLTRILEYGSTVHGDTTVTTWG---GA---EQEQTTFAAIGARAAALAHALHDELGITGDQRVGSMMYNCAEH 77 (576)
T ss_pred hhhcCCCcHHHHHHHHHHhCCCceEEEEc---CC---ceEEEeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeCCCHHH
Confidence 34455678999999999999999999864 22 23689999999999999999986 7999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
+++++||+++|+++++++|..+.+++.++++.++++++|++......+.+.... ....+.++.++..............
T Consensus 78 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~ 156 (576)
T PRK05620 78 LEVLFAVACMGAVFNPLNKQLMNDQIVHIINHAEDEVIVADPRLAEQLGEILKE-CPCVRAVVFIGPSDADSAAAHMPEG 156 (576)
T ss_pred HHHHHHHHhcCCEEeecccccCHHHHHHHHhccCCcEEEEChhhHHHHHHHHhh-CccccEEEEecCcccccchhccccc
Confidence 999999999999999999999999999999999999999998776655443332 3344555555432211100000112
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcc--eeeeeccccCCCCcEEEEec
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD--QMFVVTGKVCSEEDTYFSFL 273 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~--~~~~~~~~~~~~~d~~l~~~ 273 (501)
..+..++++.+............++++++++|||||||.||+|.++|.++........ ..+ .+..++++++.+
T Consensus 157 ~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~-----~~~~~~~~l~~~ 231 (576)
T PRK05620 157 IKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSL-----AVTHGESFLCCV 231 (576)
T ss_pred cccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhc-----CCCCCCeEEEeC
Confidence 2345677777644322223345678999999999999999999999999876544321 223 677899999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHH
Q 010774 274 PLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (501)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (501)
|++|.+++...+.++..|+++++... ++..+++.++++++|.++++|.++..++.......
T Consensus 232 pl~h~~g~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~----------------- 294 (576)
T PRK05620 232 PIYHVLSWGVPLAAFMSGTPLVFPGPDLSAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP----------------- 294 (576)
T ss_pred ChHHhhhhHHHHHHHhcCceEEecCCCCCHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC-----------------
Confidence 99999998888889999999988753 89999999999999999999999988775321100
Q ss_pred HhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC
Q 010774 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (501)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~ 431 (501)
.+. .++|.+++||+++++.+.++|++.+++++++.||+||++.+++......
T Consensus 295 --------------------~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~ 346 (576)
T PRK05620 295 --------------------PER--------MSLQEIYVGGSAVPPILIKAWEERYGVDVVHVWGMTETSPVGTVARPPS 346 (576)
T ss_pred --------------------ccc--------CceeEEEEcCCCCCHHHHHHHHHHhCCceeeeccccccccceeeeccCC
Confidence 000 2799999999999999999999988999999999999988765443221
Q ss_pred -------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccc----------------hh
Q 010774 432 -------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT----------------EE 488 (501)
Q Consensus 432 -------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~----------------~~ 488 (501)
.....++|++.++++++|+| + +..++...++.|||+++|++++.|||++++.+ .+
T Consensus 347 ~~~~~~~~~~~~~~G~~~~~~~~~i~~-~-g~~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~ 424 (576)
T PRK05620 347 GVSGEARWAYRVSQGRFPASLEYRIVN-D-GQVMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDAND 424 (576)
T ss_pred ccccccccccccccCCcCCceeEEEec-C-CccccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhc
Confidence 11235789999999999999 6 66555444578999999999999999999887 22
Q ss_pred hh-ccCcccCCCC
Q 010774 489 VI-VDGWFHTEVH 500 (501)
Q Consensus 489 ~~-~dgw~~TGD~ 500 (501)
.+ .+|||+|||.
T Consensus 425 ~~~~~g~~~TGD~ 437 (576)
T PRK05620 425 RFTADGWLRTGDV 437 (576)
T ss_pred ccccCCcEecCce
Confidence 33 5799999995
No 51
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=9.8e-49 Score=407.95 Aligned_cols=389 Identities=21% Similarity=0.239 Sum_probs=313.3
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH
Q 010774 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (501)
Q Consensus 37 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 116 (501)
..|....++.++|+++++.+|+++|+++. + +.+||+||.+++.++|..|.+.|+++|++|+++++|+++++
T Consensus 15 ~~~~~~~~l~~~l~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~v~~la~~L~~~gi~~g~~V~v~~~n~~~~~ 85 (542)
T PRK06155 15 PLPPSERTLPAMLARQAERYPDRPLLVFG---G------TRWTYAEAARAAAAAAHALAAAGVKRGDRVALMCGNRIEFL 85 (542)
T ss_pred cCCccccCHHHHHHHHHHHCCCCeEEEeC---C------ccccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHH
Confidence 34566788999999999999999999865 3 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 117 IAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 117 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
+++|||+++|++++|+++.++.+++..+++.+++++++++.+....+.+.... ......++.++..... . ....
T Consensus 86 ~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~---~~~~- 159 (542)
T PRK06155 86 DVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLLVVEAALLAALEAADPG-DLPLPAVWLLDAPASV-S---VPAG- 159 (542)
T ss_pred HHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEEEEChhhHHHHHHhccc-ccCcceEEEecCcccc-c---cccc-
Confidence 99999999999999999999999999999999999999998776665433221 1234455555432210 0 0000
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
+ ...++... ..........++++++|+|||||||.||+|.++|.++..........+ .+..++++++..|++
T Consensus 160 -~-~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~ 231 (542)
T PRK06155 160 -W-STAPLPPL-DAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDL-----EIGADDVLYTTLPLF 231 (542)
T ss_pred -c-chhhhccc-CCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhc-----CCCCCCEEEEecCHH
Confidence 0 00111111 111122334568899999999999999999999999988777665555 778999999999999
Q ss_pred HHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 277 HIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 277 ~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
|..++..++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++....
T Consensus 232 ~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~----------------------- 288 (542)
T PRK06155 232 HTNALNAFFQALLAGATYVLEPRFSASGFWPAVRRHGATVTYLLGAMVSILLSQPAR----------------------- 288 (542)
T ss_pred HHHHHHHHHHHHHcCceEEeeCCCCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCc-----------------------
Confidence 99999888899999999998875 899999999999999999999999887652110
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCccc
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMI 435 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~ 435 (501)
...++ +++|.++.|| .++.+.+.+++.+++.+++.||+||++.++..... ...+
T Consensus 289 --------------~~~~~--------~~l~~~~~g~--~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~--~~~~ 342 (542)
T PRK06155 289 --------------ESDRA--------HRVRVALGPG--VPAALHAAFRERFGVDLLDGYGSTETNFVIAVTHG--SQRP 342 (542)
T ss_pred --------------ccccc--------CceEEEEEcC--CCHHHHHHHHHHcCCCEEeeecccccCccccCCCC--CCCC
Confidence 00111 3788777665 56889999999899999999999999887665322 2345
Q ss_pred CcccccccCeEEEEeecCCCCccCCCCCCCceEEEecC---CccccccCCcccchhhhccCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~---~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++|.|+++++++|+| +++.+++.+ +.|||+++|+ +++.||+++++.+.+.|.+|||+|||.
T Consensus 343 ~~vG~~~~~~~~~i~d-~~~~~~~~g--~~Gei~v~~~~~~~~~~GY~~~~~~~~~~~~~~~~~TGD~ 407 (542)
T PRK06155 343 GSMGRLAPGFEARVVD-EHDQELPDG--EPGELLLRADEPFAFATGYFGMPEKTVEAWRNLWFHTGDR 407 (542)
T ss_pred CCcCccCCCceEEEEC-CCCCCCCCC--CceEEEEecCCccccchhhcCCHHHHHHhhcCCcEeccce
Confidence 8899999999999999 888877766 8999999998 699999999999988889999999995
No 52
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=8.9e-49 Score=407.74 Aligned_cols=390 Identities=24% Similarity=0.316 Sum_probs=318.1
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.++|.+.++.+|+++|+++. + +.+||.||.+++.++|+.|.+.|+++||+|+++++|+++++++++
T Consensus 9 ~~~~l~~~l~~~a~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gi~~~~~V~l~~~~~~~~~~~~~ 79 (523)
T PRK08316 9 RRQTIGDILRRSARRYPDKTALVFG---D------RSWTYAELDAAVNRVAAALLDLGLKKGDRVAALGHNSDAYALLWL 79 (523)
T ss_pred cCCCHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3578999999999999999999875 3 489999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|+++..+.+++..+++.+++++++++.+....+.+...... ...+........ .........
T Consensus 80 a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~------~~~~~~~~~ 151 (523)
T PRK08316 80 ACARAGAVHVPVNFMLTGEELAYILDHSGARAFLVDPALAPTAEAALALLP--VDTLILSLVLGG------REAPGGWLD 151 (523)
T ss_pred HHHhcCcEEEecccccCHHHHHHHHHhCCCCEEEEccchHHHHHHHhhhcC--ccceeeeecccc------cccccchhh
Confidence 999999999999999999999999999999999999887766544332211 111111100000 001112344
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
++++...............+++++++|||||||.||+|.++|.+++.........+ .+..++++++.+|++|..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g 226 (523)
T PRK08316 152 FADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAG-----DMSADDIPLHALPLYHCAQ 226 (523)
T ss_pred HHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCCceEEEccCCchhhh
Confidence 55554433222233445678899999999999999999999999998877655555 6888999999999999999
Q ss_pred HHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 281 QII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 281 ~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
+.. ++.++..|+++++.+. ++..+++.++++++|++.++|.++..+++..
T Consensus 227 ~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------------------- 278 (523)
T PRK08316 227 LDVFLGPYLYVGATNVILDAPDPELILRTIEAERITSFFAPPTVWISLLRHP---------------------------- 278 (523)
T ss_pred HHHHHHHHHhcCceEEEecCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCc----------------------------
Confidence 875 5667899999999864 9999999999999999999999998887521
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC-CcccC
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-FNMIG 436 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~-~~~~~ 436 (501)
...+.++ +++|.+++||++++.++.+.+++.+ +..+++.||+||++.+++...... ....+
T Consensus 279 ---------~~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 341 (523)
T PRK08316 279 ---------DFDTRDL--------SSLRKGYYGASIMPVEVLKELRERLPGLRFYNCYGQTEIAPLATVLGPEEHLRRPG 341 (523)
T ss_pred ---------ccccCCc--------ccceEEEEcCCcCCHHHHHHHHHHcCCCceeeeecccccCccccccCccccccccC
Confidence 1111222 2799999999999999999999987 789999999999988766543322 34458
Q ss_pred cccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 437 s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
++|+|+++++++|+| +++..++.+ +.|||+++|++++.||+++++.+++.|.+|||+|||.
T Consensus 342 ~~G~~~~~~~~~i~~-~~~~~~~~g--~~Gei~v~~~~~~~~y~~~~~~~~~~~~~~~~~TGDl 402 (523)
T PRK08316 342 SAGRPVLNVETRVVD-DDGNDVAPG--EVGEIVHRSPQLMLGYWDDPEKTAEAFRGGWFHSGDL 402 (523)
T ss_pred CcccCCCCcEEEEEc-CCCCCCCCC--CcceEEEECCchhhhhcCCHHHHHHHhhCCCeeccce
Confidence 999999999999999 888877765 8999999999999999999999999999999999995
No 53
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.1e-48 Score=405.64 Aligned_cols=394 Identities=20% Similarity=0.290 Sum_probs=310.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++.+.|+++++.+|++.++.+. .. +..+.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++|
T Consensus 9 ~~~~~~~l~~~~~~~~~~~~~~~~---~~--~~~~~~Ty~el~~~~~~~a~~L~~~g~~~~d~v~i~~~~~~~~~~~~la 83 (539)
T PRK07008 9 PLLISSLIAHAARHAGDTEIVSRR---VE--GDIHRYTYRDCERRAKQLAQALAALGVEPGDRVGTLAWNGYRHLEAYYG 83 (539)
T ss_pred CCCHHHHHHHHHhhCCCceEEEee---cc--CcceEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 457999999999999998888653 11 2235799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++..+++.+++++++++.+..+.+.+... .......++.+....... .....+..+
T Consensus 84 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 157 (539)
T PRK07008 84 VSGSGAVCHTINPRLFPEQIAYIVNHAEDRYVLFDLTFLPLVDALAP-QCPNVKGWVAMTDAAHLP-----AGSTPLLCY 157 (539)
T ss_pred HHhcCcEEeecccccCHHHHHHHHhccCCcEEEEcchhHHHHHHHHh-hCCCceEEEEEccCCccc-----cCCcccccH
Confidence 99999999999999999999999999999999999876654433222 223344444443321100 001224556
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHh--hcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL--SVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~--~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
+++..............++++++++|||||||.||+|++||.+++.... .+...+ ++..+|++++..|++|..
T Consensus 158 ~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~~ 232 (539)
T PRK07008 158 ETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAM-----GLSARDAVLPVVPMFHVN 232 (539)
T ss_pred HHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhccccc-----CCCCCceEEecCchHHhh
Confidence 6665443222223345678899999999999999999999999875432 222233 677899999999999988
Q ss_pred HHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 280 DQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
++...+.++..|+++++.+. ++..+++.++++++|++.++|.++..+++.....
T Consensus 233 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~------------------------ 288 (539)
T PRK07008 233 AWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA------------------------ 288 (539)
T ss_pred hHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc------------------------
Confidence 88777888999999998753 8999999999999999999999999887532110
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC------
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV------ 431 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~------ 431 (501)
..++ +++|.+++||+++++++.+++.+.+++.+++.||+||++..++......
T Consensus 289 -------------~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~ 347 (539)
T PRK07008 289 -------------GLRF--------STLRRTVIGGSACPPAMIRTFEDEYGVEVIHAWGMTEMSPLGTLCKLKWKHSQLP 347 (539)
T ss_pred -------------CCCc--------ccceEEEEcCCCCCHHHHHHHHHHhCCceecccccccccccceecccccccccCC
Confidence 1112 3899999999999999999999989999999999999987654332110
Q ss_pred ----CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 432 ----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 432 ----~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.....++|+|+||++++|+| +++.+++.+.++.|||+++|+.++.||+++++ ..+.+|||+|||.
T Consensus 348 ~~~~~~~~~~~G~p~pg~~~~i~d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~---~~~~~g~~~TGD~ 416 (539)
T PRK07008 348 LDEQRKLLEKQGRVIYGVDMKIVG-DDGRELPWDGKAFGDLQVRGPWVIDRYFRGDA---SPLVDGWFPTGDV 416 (539)
T ss_pred chhhhhhcccCCccccceEEEEEC-CCCCccCCCCCcceEEEEeCCccchhhcCChh---hhhcCCCcccCce
Confidence 11236799999999999999 88887776655689999999999999999883 3456899999995
No 54
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=4e-49 Score=416.60 Aligned_cols=386 Identities=17% Similarity=0.190 Sum_probs=293.1
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCC---CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGK---VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~ 117 (501)
...|+.++|+++++.+|+++|+++. +.. .+..+.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 32 ~~~~~~~~~~~~~~~~~~~~a~~~~---~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~-~~~gd~V~l~~~n~~e~~~ 107 (612)
T PRK12476 32 PGTTLISLIERNIANVGDTVAYRYL---DHSHSAAGCAVELTWTQLGVRLRAVGARLQQV-AGPGDRVAILAPQGIDYVA 107 (612)
T ss_pred ccCcHHHHHHHHHHhCCCceEEEEE---ccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh-cCCCCEEEEECCCChhHHH
Confidence 4578999999999999999999875 321 13346899999999999999999987 9999999999999999999
Q ss_pred HHHHHHhcCCEEEEe-cCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-CCccEEEEecCCChhhHHHhhh
Q 010774 118 AMEACNSQAITYVPL-YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEE 193 (501)
Q Consensus 118 ~~lA~~~~G~~~v~l-~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~ 193 (501)
++|||+++|++++|+ ++.++ .+++.++++.++++++|++.+....+........ .....++.++....
T Consensus 108 ~~lA~~~aG~v~vpl~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-------- 179 (612)
T PRK12476 108 GFFAAIKAGTIAVPLFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVEGFLRNLPRLRRPRVIAIDAIPD-------- 179 (612)
T ss_pred HHHHHHHcCceeEecCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHHHHHhhcccccCceEEEeccccc--------
Confidence 999999999999999 57766 7899999999999999998766554322211110 01123333322110
Q ss_pred cCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecccc-CCCCcEEEEe
Q 010774 194 LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKV-CSEEDTYFSF 272 (501)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~-~~~~d~~l~~ 272 (501)
............++++++|+|||||||.||||+++|+++++.+......+ . +..++++++.
T Consensus 180 -------------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~~~l~~ 241 (612)
T PRK12476 180 -------------SAGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSI-----DLLDRNTHGVSW 241 (612)
T ss_pred -------------cccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHh-----ccCCCCceEEEe
Confidence 00001111234568999999999999999999999999988776654444 4 5678999999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHh--hhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHH
Q 010774 273 LPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (501)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (501)
+|++|.+|+...+.+++.|+++++... ++..+++.++ +++++.++.+|+++..++.....
T Consensus 242 ~Pl~h~~g~~~~~~~~~~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~------------- 308 (612)
T PRK12476 242 LPLYHDMGLSMIGFPAVYGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGL------------- 308 (612)
T ss_pred CCcccccchHHHHHHHhcCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcC-------------
Confidence 999999998865555555555555432 7889999995 58999999999998887642100
Q ss_pred HHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh---CC---Ceeeeecccc
Q 010774 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGLTE 419 (501)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~---~~---~l~~~yG~tE 419 (501)
......++++ ++| +++||+++++++.++|.+.| |+ .+++.||+||
T Consensus 309 --------------------~~~~~~~~l~--------~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE 359 (612)
T PRK12476 309 --------------------PAEGDDIDLS--------NVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAE 359 (612)
T ss_pred --------------------hhhhcCcchh--------Hhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhh
Confidence 0001122333 789 99999999999999999987 43 4999999999
Q ss_pred cCcceecccCCCC--------------------------cccCcccccccCeEEEEeecCC-CCccCCCCCCCceEEEec
Q 010774 420 SCSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRG 472 (501)
Q Consensus 420 ~~~~~~~~~~~~~--------------------------~~~~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g 472 (501)
++..++....+.. ...+++|+|+||++++|+| ++ +++++.+ +.||||++|
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~~~~g~~v~ivd-~~~g~~~~~g--~~GEl~v~g 436 (612)
T PRK12476 360 ATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADAPNAVAHVSCGQVARSQWAVIVD-PDTGAELPDG--EVGEIWLHG 436 (612)
T ss_pred hheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCCCCcceeEeCCCcCCCCEEEEEe-CCCCcCCCCC--CEEEEEEcC
Confidence 8765543221110 0125899999999999999 77 8777766 899999999
Q ss_pred CCccccccCCcccchhhhc-------------------cCcccCCCCC
Q 010774 473 NTLFSGYYKRPDLTEEVIV-------------------DGWFHTEVHR 501 (501)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~~-------------------dgw~~TGD~~ 501 (501)
++++.|||++++.|++.|. ++||+|||.+
T Consensus 437 ~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~~~w~~TGDlg 484 (612)
T PRK12476 437 DNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADDGTWLRTGDLG 484 (612)
T ss_pred CcccccccCChHHHHHHHhhhhccccccccccccccCCCCeeeccccc
Confidence 9999999999999988873 2599999974
No 55
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-49 Score=408.03 Aligned_cols=393 Identities=20% Similarity=0.254 Sum_probs=302.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.++|+++++++|+++|+++. ++. +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 85 (534)
T PRK05852 13 DFGPRIADLVEVAATRLPEAPALVVT---ADR----IAISYRDLARLVDDLAGQLTRSGLLPGDRVALRMGSNAEFVVAL 85 (534)
T ss_pred hhcccHHHHHHHHHHhCCCCcEEEec---CCC----CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHH
Confidence 44567999999999999999999875 332 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++|++|.++.+++.++++.++++.+|++............ ......+.+....... + .....
T Consensus 86 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~----~--~~~~~ 156 (534)
T PRK05852 86 LAASRADLVVVPLDPALPIAEQRVRSQAAGARVVLIDADGPHDRAEPTT---RWWPLTVNVGGDSGPS----G--GTLSV 156 (534)
T ss_pred HHHHHcCcEEeecCCCCCcHHHHHHHHhCCCCEEEEcCCCcchhccccc---cccceeeeeccccccc----c--ccccc
Confidence 9999999999999999999999999999999999998753322111000 0011111221111000 0 00000
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
.+...... ...........++.++++|||||||.||+|.++|.++...+..+...+ .+..+|++++..|++|.+
T Consensus 157 ~~~~~~~~-~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~ 230 (534)
T PRK05852 157 HLDAATEP-TPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGY-----RLSPRDATVAVMPLYHGH 230 (534)
T ss_pred ccccccCC-CccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCcceEEEecCcchhH
Confidence 00000000 000011112246779999999999999999999999998888776655 778899999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 280 DQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 280 g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
++.. ++.+++.|+++++.. .++..+++.++++++|.++++|.+++.+++......
T Consensus 231 g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~--------------------- 289 (534)
T PRK05852 231 GLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP--------------------- 289 (534)
T ss_pred HHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc---------------------
Confidence 9885 778899999988854 278899999999999999999999999876321100
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC----
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV---- 431 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~---- 431 (501)
...++ +++|.+.++|+++++++.+.+.+.++..+++.||+||++..++....+.
T Consensus 290 --------------~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~ 347 (534)
T PRK05852 290 --------------SGRKP--------AALRFIRSCSAPLTAETAQALQTEFAAPVVCAFGMTEATHQVTTTQIEGIGQT 347 (534)
T ss_pred --------------ccccC--------CCeeEEEECCCCCCHHHHHHHHHHhCCChhhccCccccchhhhcCCccccccc
Confidence 00001 3899999999999999999999999999999999999987665433211
Q ss_pred CcccCccccc--ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 432 FNMIGTVGVP--MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 432 ~~~~~s~G~p--~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.....++|.+ .+|++++|+| +++++++.+ +.|||+|+|+.++.||+++++.+++.|.+|||+|||.
T Consensus 348 ~~~~~~~g~~g~~~g~~~~i~d-~~g~~~~~g--~~Gel~v~g~~v~~gY~~~~~~t~~~~~~g~~~TGD~ 415 (534)
T PRK05852 348 ENPVVSTGLVGRSTGAQIRIVG-SDGLPLPAG--AVGEVWLRGTTVVRGYLGDPTITAANFTDGWLRTGDL 415 (534)
T ss_pred cCcccccccCCCCCCCeEEEEC-CCCCCCCCC--CceEEEEecCcccchhcCCcccchhhhcCCCcccCce
Confidence 1111234444 7999999999 888877765 8999999999999999999999999999999999995
No 56
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.4e-48 Score=407.45 Aligned_cols=387 Identities=24% Similarity=0.286 Sum_probs=317.9
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
..-+|+.+.|.++++.+|+++|+.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 14 ~~~~n~~~~~~~~a~~~~~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 14 ARRQNWVNQLARHALMQPDAPALRFL---G------NTTTWRELDDRVAALAGALSRRGVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccccCHHHHHHHHHHHCCCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 34578999999999999999999875 3 37999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
+||+++|++++|+++..+.+++..+++.++++.++++......+.. ..........++.+.+... ....
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----------~~~~ 153 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPEIAFLVSDCGAHVVVTEAALAPVATA-VRDIVPLLSTVVVAGGSSD----------DSVL 153 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHHHHHHHHhCCCcEEEEccchHHHHHH-hhhccCccceEEEecCCCc----------cccc
Confidence 9999999999999999999999999999999999999876654422 2222234455555543211 1124
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC-CCCcEEEEecChHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHI 278 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~~~ 278 (501)
.+++++..............+++++++|||||||.||+|.++|.+++..+......+ .. ..++++++..|++|.
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~ 228 (542)
T PRK07786 154 GYEDLLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTN-----GADINSDVGFVGVPLFHI 228 (542)
T ss_pred CHHHHhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhc-----CCCCCCceEEEecchHHH
Confidence 455655443222223344567899999999999999999999999998887655544 33 577899999999999
Q ss_pred HHHHHHHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 279 YDQIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
+|+..++.++..|+++++.+ .++..+++.++++++|.++++|.+++.+++.....
T Consensus 229 ~g~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~---------------------- 286 (542)
T PRK07786 229 AGIGSMLPGLLLGAPTVIYPLGAFDPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQAR---------------------- 286 (542)
T ss_pred HHHHHHHHHHHccCEEEEccCCCcCHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccC----------------------
Confidence 99887889999999999865 28999999999999999999999999987521100
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC-Cc
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-FN 433 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~-~~ 433 (501)
... .++|.+++||+++++++.+.+++.+ +..+++.||+||++.+.+....+. ..
T Consensus 287 -------------~~~-----------~~lr~i~~gg~~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~~~~~~~ 342 (542)
T PRK07786 287 -------------PRD-----------LALRVLSWGAAPASDTLLRQMAATFPEAQILAAFGQTEMSPVTCMLLGEDAIR 342 (542)
T ss_pred -------------ccC-----------cceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccceEecCcccccc
Confidence 000 2689999999999999999999988 788999999999987655433222 23
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
..+++|+|++++.++|+| +++.+++.+ +.|||+++|+.++.||+++++.+...|.+|||+|||.
T Consensus 343 ~~~~~G~~~~~~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~f~~~~~~TGDl 406 (542)
T PRK07786 343 KLGSVGKVIPTVAARVVD-ENMNDVPVG--EVGEIVYRAPTLMSGYWNNPEATAEAFAGGWFHSGDL 406 (542)
T ss_pred cCCCccccCCCceEEEEC-CCCCCCcCC--CceEEEEEChhhhhhhcCCHHHHHHHhhCCcccccce
Confidence 457899999999999999 888877665 8999999999999999999999999999999999995
No 57
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.2e-49 Score=422.87 Aligned_cols=360 Identities=20% Similarity=0.274 Sum_probs=292.2
Q ss_pred CCHHHHHHHHHHh--CCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 43 ESPWQFFCDSAKR--IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 43 ~tl~~~l~~~a~~--~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
.|+.++|.++++. +|+++|+++. ..+||+||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 4 ~~~~~~~~~~a~~~~~pd~~a~~~~----------~~~Ty~eL~~~~~~lA~~L~~~g~~~g~~V~i~~~~~~~~~~~~l 73 (705)
T PRK06060 4 GNLAGLLAEQASEAGWYDRPAFYAA----------DVVTHGQIHDGAARLGEVLRNRGLSSGDRVLLCLPDSPDLVQLLL 73 (705)
T ss_pred cCHHHHHHHHHhhccCCCceEEEec----------CceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3789999998886 7999999743 259999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|++|.++.+++.++++.++++++|++......+... .++ .
T Consensus 74 a~~~aG~~~vpi~p~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~---------~~~---------------------~ 123 (705)
T PRK06060 74 ACLARGVMAFLANPELHRDDHALAARNTEPALVVTSDALRDRFQPS---------RVA---------------------E 123 (705)
T ss_pred HHHHhCcEEEecCCCCCHHHHHHHHhcCCCcEEEEchHHhhhhccc---------ccc---------------------h
Confidence 9999999999999999999999999999999999987544322110 000 0
Q ss_pred HHHHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcc-eeeeeccccCCCCcEEEEecChHH
Q 010774 201 WEEFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVD-QMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 201 ~~~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~-~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
..+++... ..+....+..++++++++|||||||.||||.++|.++...+..+. ..+ .+...|++++..|++|
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~~~~~~~ 198 (705)
T PRK06060 124 AAELMSEAARVAPGGYEPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKAL-----RLTPEDTGLCSARMYF 198 (705)
T ss_pred hhhhhhhccccCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhh-----CCCCcceeEEeccchh
Confidence 00111110 011112234568899999999999999999999999988776543 233 6778899999999999
Q ss_pred HHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.+++.|+++++.+. ++..+...++++++|+++++|+++..+++....
T Consensus 199 ~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~---------------------- 256 (705)
T PRK06060 199 AYGLGNSVWFPLATGGSAVINSAPVTPEAAAILSARFGPSVLYGVPNFFARVIDSCSP---------------------- 256 (705)
T ss_pred hcchhHHHHHHHhcCCEEEEeCCCCCHHHHHHHHHhcCCeEEeeHHHHHHHHHHhccc----------------------
Confidence 988764 7789999999999863 788889999999999999999999988752100
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFN 433 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~ 433 (501)
.++ +++|.+++||+++++++.+++.+.+ ++++++.||+||++.++.....+ ..
T Consensus 257 -----------------~~~--------~slr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~-~~ 310 (705)
T PRK06060 257 -----------------DSF--------RSLRCVVSAGEALELGLAERLMEFFGGIPILDGIGSTEVGQTFVSNRVD-EW 310 (705)
T ss_pred -----------------ccc--------cceeEEEEecCcCCHHHHHHHHHHcCCCceEeeeeccccCceEEeccCC-CC
Confidence 011 3899999999999999999999988 58999999999998665443322 22
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
..+++|+|+++++++|+| +++.+++.| +.|||||+|++++.||||+++.+.. .+|||+|||.
T Consensus 311 ~~~~iG~p~~~~~v~i~d-~~g~~~~~g--~~GEl~i~g~~v~~GY~~~~~~~~~--~~~~~~TGDl 372 (705)
T PRK06060 311 RLGTLGRVLPPYEIRVVA-PDGTTAGPG--VEGDLWVRGPAIAKGYWNRPDSPVA--NEGWLDTRDR 372 (705)
T ss_pred CcCcccccCCCcEEEEEC-CCCCCCCCC--CceEEEEccchhhhhhhCCCccccc--CCCcEECCee
Confidence 357899999999999999 888877665 8999999999999999999986432 4799999995
No 58
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.8e-49 Score=408.31 Aligned_cols=386 Identities=20% Similarity=0.260 Sum_probs=307.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...|+.++|.+.++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+++++|+++++++++
T Consensus 5 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~Ty~el~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~l 75 (528)
T PRK07470 5 RVMNLAHFLRQAARRFPDRIALVWG---D------RSWTWREIDARVDALAAALAARGVRKGDRILVHSRNCNQMFESMF 75 (528)
T ss_pred cCCCHHHHHHHHHHHCCCceEEEEC---C------ccccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHH
Confidence 3577999999999999999999864 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++++++..+.+++..+++.++++.++++.+......... ........++.+..... ...
T Consensus 76 A~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------------~~~ 142 (528)
T PRK07470 76 AAFRLGAVWVPTNFRQTPDEVAYLAEASGARAMICHADFPEHAAAVR-AASPDLTHVVAIGGARA------------GLD 142 (528)
T ss_pred HHHhCCeEEEecCccCCHHHHHHHHHhcCceEEEEcchhHHHHHHHH-hhCCcCceEEEeCCCcc------------ccc
Confidence 99999999999999999999999999999999999987654432221 11123334444433211 124
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
++++.... ...........+++++|+|||||||.||+|.++|.++...+......+ .......|+++..+|++|.+
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~ 219 (528)
T PRK07470 143 YEALVARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADL---MPGTTEQDASLVVAPLSHGA 219 (528)
T ss_pred HHHHHhcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHh---ccCCCcccEEEEeccchhHH
Confidence 55555433 112223345678899999999999999999999999876544322111 11456789999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC---CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 280 DQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
++..++ .++.|++.++.+. ++..+++.++++++|++.++|.+++.+++..
T Consensus 220 ~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------------------------- 272 (528)
T PRK07470 220 GIHQLC-QVARGAATVLLPSERFDPAEVWALVERHRVTNLFTVPTILKMLVEHP-------------------------- 272 (528)
T ss_pred HHHHHH-HHhcCceEEEecccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCc--------------------------
Confidence 987544 5677777766642 8899999999999999999999999887521
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC------
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD------ 430 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~------ 430 (501)
.....++ +++|.+++||+++++...+++.+.+|..+++.||+||+++.++.....
T Consensus 273 -----------~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 333 (528)
T PRK07470 273 -----------AVDRYDH--------SSLRYVIYAGAPMYRADQKRALAKLGKVLVQYFGLGEVTGNITVLPPALHDAED 333 (528)
T ss_pred -----------CcCCCCC--------cceEEEEEcCCCCCHHHHHHHHHHhCcHHHHhCCCcccCCceeecchhhccccc
Confidence 1111122 389999999999999999999888899999999999998766543221
Q ss_pred -CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 431 -VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 431 -~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.....+++|+|++|++++|+| +++.+++.+ +.|||+++|+.++.||+++++.+++.|.+|||+|||.
T Consensus 334 ~~~~~~~~~G~~~~g~~~~i~d-~~~~~~~~g--~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~TGDl 401 (528)
T PRK07470 334 GPDARIGTCGFERTGMEVQIQD-DEGRELPPG--ETGEICVIGPAVFAGYYNNPEANAKAFRDGWFRTGDL 401 (528)
T ss_pred cccceeeccCcccCCcEEEEEC-CCCCCCCCC--CceEEEEeCCccchhhcCCHHHHHhhhcCCcEeccee
Confidence 122347899999999999999 888877665 8999999999999999999999988889999999995
No 59
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-48 Score=407.25 Aligned_cols=399 Identities=22% Similarity=0.341 Sum_probs=304.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
.++.+.|.++++++|+++|+++. + +.+||.||.++++++|++|.+. |+++||+|+++++|++++++++||
T Consensus 24 ~~~~~~l~~~~~~~p~~~a~~~~----~-----~~~Ty~~l~~~~~~~a~~L~~~~gi~~gd~V~i~~~n~~e~~~~~la 94 (562)
T PRK12492 24 KSVVEVFERSCKKFADRPAFSNL----G-----VTLSYAELERHSAAFAAYLQQHTDLVPGDRIAVQMPNVLQYPIAVFG 94 (562)
T ss_pred CcHHHHHHHHHHhCCCCeeEecC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 58999999999999999999754 2 4799999999999999999985 999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCC--ChhhHH----------
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV--SSSQKK---------- 189 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~~~~---------- 189 (501)
|+++|++++++++.++.+++.++++.++++++++++............. ....++..... ....+.
T Consensus 95 ~~~~G~v~v~~~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (562)
T PRK12492 95 ALRAGLIVVNTNPLYTAREMRHQFKDSGARALVYLNMFGKLVQEVLPDT--GIEYLIEAKMGDLLPAAKGWLVNTVVDKV 172 (562)
T ss_pred HHHcCeEEeccCccCCHHHHHHHHhccCceEEEeccccchHHHHhhhcc--CceEEEeechhhccccccchhcccccccc
Confidence 9999999999999999999999999999999999875544332221110 11111111000 000000
Q ss_pred ---HhhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecc----c
Q 010774 190 ---EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG----K 261 (501)
Q Consensus 190 ---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~----~ 261 (501)
...........++++.... ...........+++++|+|||||||.||+|.++|+++...+......+.... .
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~ 252 (562)
T PRK12492 173 KKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQLGPDGQP 252 (562)
T ss_pred cccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhcccccccc
Confidence 0000001223455554332 1111223456688999999999999999999999999877665433221000 0
Q ss_pred cCCC-CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEec--CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcC
Q 010774 262 VCSE-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (501)
Q Consensus 262 ~~~~-~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 337 (501)
.... +++++..+|++|.+++.. ++..+..|..+++.. .++..+++.++++++|+++++|.++..+++.
T Consensus 253 ~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~-------- 324 (562)
T PRK12492 253 LMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITNPRDIPGFIKELGKWRFSALLGLNTLFVALMDH-------- 324 (562)
T ss_pred cccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecCCcCHHHHHHHHHHhCCceeeCcHHHHHHHHhC--------
Confidence 0222 457889999999999875 566778888776653 3889999999999999999999999988752
Q ss_pred ChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecc
Q 010774 338 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGL 417 (501)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~ 417 (501)
+.....++ +++|.+++||+++++++.+.|.+.+++++++.||+
T Consensus 325 -----------------------------~~~~~~~~--------~~lr~~~~gG~~~~~~~~~~~~~~~~~~~~~~YG~ 367 (562)
T PRK12492 325 -----------------------------PGFKDLDF--------SALKLTNSGGTALVKATAERWEQLTGCTIVEGYGL 367 (562)
T ss_pred -----------------------------cCcccccc--------cceeEEEeccccCCHHHHHHHHHHhCCceeeccCc
Confidence 11112223 28999999999999999999999889999999999
Q ss_pred cccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCccc
Q 010774 418 TESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFH 496 (501)
Q Consensus 418 tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~ 496 (501)
||++.+++..........+++|+|+++++++|+| +++.+++.+ +.|||+|+|+.++.|||++++.+.+.| .+|||+
T Consensus 368 tE~~~~~~~~~~~~~~~~~~~G~p~~~~~v~ivd-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~g~~~ 444 (562)
T PRK12492 368 TETSPVASTNPYGELARLGTVGIPVPGTALKVID-DDGNELPLG--ERGELCIKGPQVMKGYWQQPEATAEALDAEGWFK 444 (562)
T ss_pred cccCceeeecCCcccccCCccceecCCCEEEEEC-CCCCCCCCC--CceEEEEeCCccccccccCchhhhhcccCCCcee
Confidence 9998877655444334458899999999999999 888877665 899999999999999999999998888 689999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 445 TGD~ 448 (562)
T PRK12492 445 TGDI 448 (562)
T ss_pred cCcE
Confidence 9995
No 60
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=3.2e-48 Score=401.58 Aligned_cols=379 Identities=22% Similarity=0.357 Sum_probs=306.5
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.+|.++|..++ .+|+++|+.+. ++ +.+||.||.++++++|++|.++|+++||+|+++++|+++++++++||
T Consensus 3 ~~l~~~~~~~~-~~~~~~a~~~~---~~-----~~~Ty~eL~~~~~~la~~L~~~g~~~gd~v~i~~~~~~e~~v~~la~ 73 (504)
T PRK07514 3 NNLFDALRAAF-ADRDAPFIETP---DG-----LRYTYGDLDAASARLANLLVALGVKPGDRVAVQVEKSPEALALYLAT 73 (504)
T ss_pred ccHHHHHHHHh-hCCCCeEEEeC---CC-----CEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHH
Confidence 67999999999 99999999764 33 58999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++..+.+++..+++.+++++++++......+...... .....++.++.... ..+.
T Consensus 74 ~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-------------~~~~ 138 (504)
T PRK07514 74 LRAGAVFLPLNTAYTLAELDYFIGDAEPALVVCDPANFAWLSKIAAA--AGAPHVETLDADGT-------------GSLL 138 (504)
T ss_pred HHcCcEEEECCCCCCHHHHHHHHHhCCCcEEEEccchhHHHHHhhhc--cCCceEEEecCCCc-------------ccHH
Confidence 99999999999999999999999999999999998766554332221 11222333332111 0111
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
+................+++++|+|||||||.||+|.++|.++...+......+ ....+|++++.+|++|..++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~~ 213 (504)
T PRK07514 139 EAAAAAPDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYW-----RFTPDDVLIHALPIFHTHGLF 213 (504)
T ss_pred HhhhhcCcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHh-----CCCCccEEEEecchHHHHHHH
Confidence 221111112222344578899999999999999999999999999887765555 678899999999999999987
Q ss_pred H-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCC
Q 010774 283 I-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (501)
Q Consensus 283 ~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (501)
. ++.+++.|+++++.+. ++..+++.+ .++|++.++|.++..+++.
T Consensus 214 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~------------------------------- 260 (504)
T PRK07514 214 VATNVALLAGASMIFLPKFDPDAVLALM--PRATVMMGVPTFYTRLLQE------------------------------- 260 (504)
T ss_pred HHHHHHHhcCcEEEECCCCCHHHHHHHH--HhheeeecHHHHHHHHHcC-------------------------------
Confidence 5 7789999999998876 899999998 4799999999999888641
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccc
Q 010774 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGV 440 (501)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~ 440 (501)
+.....++ +++|.+++||+++++++.+.|++.++.++++.||+||++.+++... ......+++|.
T Consensus 261 ------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~~G~ 325 (504)
T PRK07514 261 ------PRLTREAA--------AHMRLFISGSAPLLAETHREFQERTGHAILERYGMTETNMNTSNPY-DGERRAGTVGF 325 (504)
T ss_pred ------CCCCcccc--------cceeeEEecCCCCCHHHHHHHHHHhCCcceeecccccccccccCCc-cccccCccccc
Confidence 11111222 3899999999999999999999999999999999999886554322 22333478999
Q ss_pred cccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 441 PMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 441 p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
|+++++++|+|++++.+++.+ +.|||+|+|++++.||+++++.+++.| .+|||+|||.
T Consensus 326 ~~~~~~v~i~d~~~~~~~~~g--~~Gel~i~~~~~~~gy~~~~~~~~~~~~~~~~~~TGDl 384 (504)
T PRK07514 326 PLPGVSLRVTDPETGAELPPG--EIGMIEVKGPNVFKGYWRMPEKTAEEFRADGFFITGDL 384 (504)
T ss_pred CCCCcEEEEEECCCCCCCCCC--CceEEEEecCCccccccCCchhhhhhcccCCCeeecce
Confidence 999999999995555555544 899999999999999999999999888 5899999996
No 61
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=3.1e-48 Score=406.74 Aligned_cols=391 Identities=24% Similarity=0.390 Sum_probs=311.7
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|.+.++.+|+++|+++. +++ +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~~~~~~~~~ai~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~ 85 (559)
T PRK08315 13 LLEQTIGQLLDRTAARYPDREALVYR---DQG----LRWTYREFNEEVDALAKGLLALGIEKGDRVGIWAPNVPEWVLTQ 85 (559)
T ss_pred hhhccHHHHHHHHHHHCCCCeEEEEc---CCC----eEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHH
Confidence 34468999999999999999999875 443 57999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhh-----hhhcCcc------------CCCCccEEEEecC
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPS-----ILSCLPR------------CCLYLKTIVSFAN 182 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~-----~~~~~~~------------~~~~~~~v~~~~~ 182 (501)
|||+++|++++|++|..+.+++..+++.++++.++++...... +.+...+ .......++.++.
T Consensus 86 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (559)
T PRK08315 86 FATAKIGAILVTINPAYRLSELEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPELRRVIFLGD 165 (559)
T ss_pred HHHHHhCeEEEecCccCCHHHHHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCceeEEeecc
Confidence 9999999999999999999999999999999999998754321 1111000 0112233333332
Q ss_pred CChhhHHHhhhcCceEeeHHHHHhcCC------CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceee
Q 010774 183 VSSSQKKEAEELGVSCFSWEEFLQLGT------LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF 256 (501)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~ 256 (501)
.. ......++++..... ..........+++++++|||||||.||+|.++|.+++..+......+
T Consensus 166 ~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~ 235 (559)
T PRK08315 166 EK----------HPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAM 235 (559)
T ss_pred cC----------CcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhc
Confidence 11 011233444433220 01112234567899999999999999999999999998888766655
Q ss_pred eeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHH
Q 010774 257 VVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (501)
Q Consensus 257 ~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 333 (501)
.+..+|+++...|++|.+++.. ++.++..|+++++... ++..+++.++++++|+++++|.++..++...
T Consensus 236 -----~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~--- 307 (559)
T PRK08315 236 -----KLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGEGFDPLATLAAVEEERCTALYGVPTMFIAELDHP--- 307 (559)
T ss_pred -----CCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHcCCeEEecchHHHHHHHhCc---
Confidence 7889999999999999999875 7889999999986543 8999999999999999999999998876421
Q ss_pred hhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCC-ee
Q 010774 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LT 412 (501)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~-l~ 412 (501)
....+++ +++|.+++||+++++++.+.+.+.++.. ++
T Consensus 308 ----------------------------------~~~~~~~--------~~lr~~~~~G~~~~~~~~~~~~~~~~~~~l~ 345 (559)
T PRK08315 308 ----------------------------------DFARFDL--------SSLRTGIMAGSPCPIEVMKRVIDKMHMSEVT 345 (559)
T ss_pred ----------------------------------ccCCCCc--------hhhheeEecCCCCCHHHHHHHHHHcCCccee
Confidence 1111122 2799999999999999999999988764 99
Q ss_pred eeecccccCcceecccCCC--CcccCcccccccCeEEEEeecCC-CCccCCCCCCCceEEEecCCccccccCCcccchhh
Q 010774 413 QGYGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEV 489 (501)
Q Consensus 413 ~~yG~tE~~~~~~~~~~~~--~~~~~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~ 489 (501)
+.||+||++.+++...... .....++|+|+||++++|+| ++ ++.++.+ +.|||+|+|++++.||+++++.+...
T Consensus 346 ~~YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d-~~~~~~~~~g--~~GEl~v~g~~~~~gy~~~~~~~~~~ 422 (559)
T PRK08315 346 IAYGMTETSPVSTQTRTDDPLEKRVTTVGRALPHLEVKIVD-PETGETVPRG--EQGELCTRGYSVMKGYWNDPEKTAEA 422 (559)
T ss_pred EEEcccccccceeecCcccchhhccCCCCccCCCcEEEEEc-CccCCcCCCC--CceEEEEECchhhhhhcCChhHHhhc
Confidence 9999999988766543322 23457899999999999999 66 7777665 89999999999999999999999888
Q ss_pred h-ccCcccCCCC
Q 010774 490 I-VDGWFHTEVH 500 (501)
Q Consensus 490 ~-~dgw~~TGD~ 500 (501)
+ .++||+|||.
T Consensus 423 ~~~~~~~~TGD~ 434 (559)
T PRK08315 423 IDADGWMHTGDL 434 (559)
T ss_pred CCCCCCEEccce
Confidence 8 7899999995
No 62
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.7e-48 Score=413.56 Aligned_cols=398 Identities=19% Similarity=0.195 Sum_probs=301.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....|+.+.+..+ .+|+++|+++. +. .+..+.+||+||.++++++|++|+++|+++||+|+++++|++++++++
T Consensus 83 ~~~~n~~~~~~~~--~~~~~~Al~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~gd~V~i~~~n~~e~v~~~ 156 (655)
T PRK03584 83 GARLNYAENLLRH--RRDDRPAIIFR---GE-DGPRRELSWAELRRQVAALAAALRALGVGPGDRVAAYLPNIPETVVAM 156 (655)
T ss_pred CCEeeHHHHhhcc--CCCCCeEEEEE---CC-CCceEEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 3444666666543 58999999986 43 344578999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhhhcCccCCCCccEEEEecCCChhhHHH
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKKE 190 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 190 (501)
|||+++|++++|++|.++.+++.++++.++++++|+++... ..+.+.. ..+..+..++.+.......
T Consensus 157 lA~~~~Gav~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~--- 232 (655)
T PRK03584 157 LATASLGAIWSSCSPDFGVQGVLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELR-AALPSLEHVVVVPYLGPAA--- 232 (655)
T ss_pred HHHHHcCcEEEeeCCCCCHHHHHHHHHHcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEecCCCcc---
Confidence 99999999999999999999999999999999999987532 1111111 1223344555554321100
Q ss_pred hhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH-HhhcceeeeeccccCCCCcE
Q 010774 191 AEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEEDT 268 (501)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d~ 268 (501)
..........+++++... ...........+++++|+|||||||.||||+++|.+++.. ...+...+ .+..+|+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~ 307 (655)
T PRK03584 233 AAAALPGALLWEDFLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHC-----DLGPGDR 307 (655)
T ss_pred cccccCCcccHHHHhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhc-----CCCCCCE
Confidence 000111234566665422 1222234456789999999999999999999999987644 44444444 6788999
Q ss_pred EEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHH
Q 010774 269 YFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKK 343 (501)
Q Consensus 269 ~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~ 343 (501)
+++..++.|..+. .++.+|+.|+++++... ++..+++.++++++|++.++|++++.+.+.-
T Consensus 308 ~~~~~~~~~~~~~-~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~------------- 373 (655)
T PRK03584 308 FFWYTTCGWMMWN-WLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAG------------- 373 (655)
T ss_pred EEEcCCchHHhHH-HHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcC-------------
Confidence 9999999987543 46689999999999752 7899999999999999999999998876410
Q ss_pred HHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh--CCCeeeeecccccC
Q 010774 344 LFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESC 421 (501)
Q Consensus 344 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~--~~~l~~~yG~tE~~ 421 (501)
.......+++ +||.+++||+++++++.+++.+.+ ++.+++.||+||++
T Consensus 374 ----------------------~~~~~~~~l~--------sLr~i~~~Ge~l~~~~~~~~~~~~~~~~~~~~~yG~TE~~ 423 (655)
T PRK03584 374 ----------------------LVPGETHDLS--------ALRTIGSTGSPLPPEGFDWVYEHVKADVWLASISGGTDIC 423 (655)
T ss_pred ----------------------CCccccCChh--------heEEEEEecCCCCHHHHHHHHHHhCCCceEEeccChHhhh
Confidence 0001122333 899999999999999999999987 47899999999987
Q ss_pred cceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecC--CccccccCCcccch--hhh---ccCc
Q 010774 422 SGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTE--EVI---VDGW 494 (501)
Q Consensus 422 ~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~--~v~~gY~~~~~~~~--~~~---~dgw 494 (501)
+............++++|.|++|++++|+| +++.++ . ++.|||+|+|+ +++.|||++++.++ ..+ .+||
T Consensus 424 ~~~~~~~~~~~~~~g~~g~p~~g~~~~ivd-~~g~~~-~--g~~GeL~v~gp~p~~~~gy~~~~~~~~~~~~~~~~~~g~ 499 (655)
T PRK03584 424 SCFVGGNPLLPVYRGEIQCRGLGMAVEAWD-EDGRPV-V--GEVGELVCTKPFPSMPLGFWNDPDGSRYRDAYFDTFPGV 499 (655)
T ss_pred cccccCCCCCCcCCCccCCCcCCceeEEEC-CCCCCC-C--CCceEEEEccCCCCCcceeeCCCccchHHHhhhccCCCE
Confidence 654433332334558999999999999999 888766 3 48999999996 79999999998653 222 2689
Q ss_pred ccCCCC
Q 010774 495 FHTEVH 500 (501)
Q Consensus 495 ~~TGD~ 500 (501)
|+|||.
T Consensus 500 ~~TGDl 505 (655)
T PRK03584 500 WRHGDW 505 (655)
T ss_pred eecCCe
Confidence 999995
No 63
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=4e-48 Score=402.02 Aligned_cols=387 Identities=24% Similarity=0.330 Sum_probs=315.5
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
++.++|.+.++.+|+++|+.+. + +.+||+||.+++.++|++|.+.|+.+||+|+++++|++++++++|||+
T Consensus 1 ~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~v~~~a~~l~~~g~~~~~~V~i~~~n~~~~~~~~lA~~ 71 (515)
T TIGR03098 1 LLHHLLEDAAARLPDATALVHH---D------RTLTYAALSERVLALASGLRGLGLARGERVAIYLDKRLETVTAMFGAA 71 (515)
T ss_pred CHHHHHHHHHHHCCCCeEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 3788999999999999999875 3 479999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHH
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (501)
++|++++|+++.++.+++..+++.++++++|++.+....+....... .....++.++...... ........+++
T Consensus 72 ~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 145 (515)
T TIGR03098 72 LAGGVFVPINPLLKAEQVAHILADCNVRLLVTSSERLDLLHPALPGC-HDLRTLILVGEPAHAS-----EGGGESPSWPK 145 (515)
T ss_pred hcCEEEEeCCCCCCHHHHHHHHHcCCCeEEEEccchhhhhHhhhhcc-cccceEEEecCccccc-----CCccccccHHH
Confidence 99999999999999999999999999999999887666554433322 3445555555332110 01122334555
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH
Q 010774 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (501)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 283 (501)
+...... ........+++++++|||||||.||+|.+||.++...+......+ .+..+|++++.+|++|.+++..
T Consensus 146 ~~~~~~~-~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~~~ 219 (515)
T TIGR03098 146 LLALGDA-DPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYL-----ENRPDDRLLAVLPLSFDYGFNQ 219 (515)
T ss_pred hhccccc-cccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHh-----CCCcccEEEEECchhhHhHHHH
Confidence 5443221 122334567899999999999999999999999998887766555 6788999999999999999988
Q ss_pred HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCC
Q 010774 284 ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQ 362 (501)
Q Consensus 284 ~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (501)
++.++..|+++++.+. ++..+++.++++++|+++++|.++..+.+..
T Consensus 220 ~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~-------------------------------- 267 (515)
T TIGR03098 220 LTTAFYVGATVVLHDYLLPRDVLKALEKHGITGLAAVPPLWAQLAQLD-------------------------------- 267 (515)
T ss_pred HHHHHHcCCEEEEcCCCCHHHHHHHHHHcCCceEecChHHHHHHHhcc--------------------------------
Confidence 8999999999998875 8999999999999999999999998876410
Q ss_pred CCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCcccCccccc
Q 010774 363 NKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (501)
Q Consensus 363 ~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p 441 (501)
....++ +++|.+++||+++++++.+.+++.+ +..+++.||+||++.++..........++++|+|
T Consensus 268 ------~~~~~~--------~~l~~~~~~g~~l~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~ 333 (515)
T TIGR03098 268 ------WPESAA--------PSLRYLTNSGGAMPRATLSRLRSFLPNARLFLMYGLTEAFRSTYLPPEEVDRRPDSIGKA 333 (515)
T ss_pred ------cCCCCc--------cceEEEEecCCcCCHHHHHHHHHHCCCCeEeeeeccccccceEecccccccCCCCCccee
Confidence 000011 3899999999999999999999988 6789999999999876555443334456899999
Q ss_pred ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc------------cCcccCCCC
Q 010774 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV------------DGWFHTEVH 500 (501)
Q Consensus 442 ~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~------------dgw~~TGD~ 500 (501)
+++++++|+| +++..++.+ +.|||+++|+.++.|||++++.+.+.|. ++||+|||.
T Consensus 334 ~~~~~~~i~~-~~~~~~~~~--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~ 401 (515)
T TIGR03098 334 IPNAEVLVLR-EDGSECAPG--EEGELVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDT 401 (515)
T ss_pred cCCCEEEEEC-CCCCCCCCC--CceEEEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccce
Confidence 9999999999 888777654 8999999999999999999988876652 348999995
No 64
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-48 Score=403.62 Aligned_cols=385 Identities=22% Similarity=0.255 Sum_probs=310.0
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....|+.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~Ty~~l~~~~~~~a~~L~~~gv~~~~~V~i~~~~~~~~~~~~ 79 (524)
T PRK06188 9 HSGATYGHLLVSALKRYPDRPALVLG---D------TRLTYGQLADRISRYIQAFEALGLGTGDAVALLSLNRPEVLMAI 79 (524)
T ss_pred cCCccHHHHHHHHHHHCCCCeEEEEC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHH
Confidence 34568999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC-ChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN-KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
+||+++|++++|++|..+.+++..+++.++++.++++.. ....... .......+..++.+.......
T Consensus 80 la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~----------- 147 (524)
T PRK06188 80 GAAQLAGLRRTALHPLGSLDDHAYVLEDAGISTLIVDPAPFVERALA-LLARVPSLKHVLTLGPVPDGV----------- 147 (524)
T ss_pred HHHHHhCCEEEecccCCCHHHHHHHHHhcCceEEEEecchhhHHHHH-HhhhcCCceEEEEeCCccchh-----------
Confidence 999999999999999999999999999999999999876 3332222 122223334454444322100
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHH
Q 010774 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
...+...............++++++|+|||||||.||+|.++|.++...+......+ .+..++++++.+|++|.
T Consensus 148 -~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~pl~~~ 221 (524)
T PRK06188 148 -DLLAAAAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEW-----EWPADPRFLMCTPLSHA 221 (524)
T ss_pred -hHHHhhhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhc-----CCCcCcEEEEecCchhh
Confidence 011111111111111122345699999999999999999999999999888766665 77889999999999998
Q ss_pred HHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 279 YDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
+++. ++.+++.|+++++.+. ++..+++.++++++|+++++|.++..+++..
T Consensus 222 ~g~~-~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~--------------------------- 273 (524)
T PRK06188 222 GGAF-FLPTLLRGGTVIVLAKFDPAEVLRAIEEQRITATFLVPTMIYALLDHP--------------------------- 273 (524)
T ss_pred hhHH-HHHHHHcCCEEEEcCCCCHHHHHHHHHHhCCEEEEehHHHHHHHHhCc---------------------------
Confidence 8864 5678999999999876 8999999999999999999999999987621
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-----C
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-----F 432 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-----~ 432 (501)
.....++ +++|.+++||++++++..+.+.+.++..+++.||+||++.+++...... .
T Consensus 274 ----------~~~~~~l--------~~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~ 335 (524)
T PRK06188 274 ----------DLRTRDL--------SSLETVYYGASPMSPVRLAEAIERFGPIFAQYYGQTEAPMVITYLRKRDHDPDDP 335 (524)
T ss_pred ----------CccCCCC--------cceeEEEEcCCCCCHHHHHHHHHHhCchhhheeCccccCCceeecCchhcccccc
Confidence 1111122 3899999999999999999888888999999999999976655433221 2
Q ss_pred cccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 433 NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 433 ~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
....++|+|+||++++|+| +++++++.+ +.|||+++|+.++.||+++++.+...+.+|||+|||.
T Consensus 336 ~~~~~~G~p~~g~~v~i~~-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~g~~~TGDl 400 (524)
T PRK06188 336 KRLTSCGRPTPGLRVALLD-EDGREVAQG--EVGEICVRGPLVMDGYWNRPEETAEAFRDGWLHTGDV 400 (524)
T ss_pred ccCCccccccCCcEEEEEc-CCCCCCCCC--CeeEEEEECcchhhhhcCChHHhhhhhcCCceeecce
Confidence 3457899999999999999 888877655 8999999999999999999999998889999999994
No 65
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=6.3e-48 Score=398.68 Aligned_cols=376 Identities=22% Similarity=0.291 Sum_probs=305.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++.+.|.++++.+|+++|+++. + +.+||.||.++++++|.+|.+.|+++|++|+++++|+++++++++|
T Consensus 1 ~~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~el~~~v~~~a~~L~~~g~~~~~~v~i~~~~~~~~~~~~la 71 (497)
T PRK06145 1 MFNLSASIAFHARRTPDRAALVYR---D------QEISYAEFHQRILQAAGMLHARGIGQGDVVALLMKNSAAFLELAFA 71 (497)
T ss_pred CccHHHHHHHHHHHCCCceEEEEC---C------cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 467899999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++..+.+++.++++.++++.++++.+...... . ....+.++..... .+
T Consensus 72 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~-~-------~~~~~~~~~~~~~-------------~~ 130 (497)
T PRK06145 72 ASYLGAVFLPINYRLAADEVAYILGDAGAKLLLVDEEFDAIVA-L-------ETPKIVIDAAAQA-------------DS 130 (497)
T ss_pred HHhcCcEEEecccccCHHHHHHHHHhcCCcEEEEccchhhhhh-c-------ccceEEecCcccc-------------hh
Confidence 9999999999999999999999999999999999876543321 0 0112222211100 01
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
..+..............++++++++|||||||.||+|.++|.++..........+ .+..+++++...|++|.+++
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~ 205 (497)
T PRK06145 131 RRLAQGGLEIPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIAL-----GLTASERLLVVGPLYHVGAF 205 (497)
T ss_pred HHHhccCCCCCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhh-----CCCCCcEEEEecCchhHhHH
Confidence 1111111111112234568899999999999999999999999987665544444 67889999999999999998
Q ss_pred HH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccC
Q 010774 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (501)
Q Consensus 282 ~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (501)
.. .+.+++.|+++++.+. ++..+++.++++++|.+.++|+++..++...
T Consensus 206 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~----------------------------- 256 (497)
T PRK06145 206 DLPGIAVLWVGGTLRIHREFDPEAVLAAIERHRLTCAWMAPVMLSRVLTVP----------------------------- 256 (497)
T ss_pred HHHHHHHHhccCEEEECCcCCHHHHHHHHHHhCCeEEEehHHHHHHHHcCC-----------------------------
Confidence 75 5778999999988775 9999999999999999999999999887521
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCC-CCcccCc
Q 010774 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLAD-VFNMIGT 437 (501)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~-~~~~~~s 437 (501)
.....++ +++|.+++||+++++++.+.+.+.| +..+++.||+||++..++..... .....++
T Consensus 257 --------~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~~~~~~~~ 320 (497)
T PRK06145 257 --------DRDRFDL--------DSLAWCIGGGEKTPESRIRDFTRVFTRARYIDAYGLTETCSGDTLMEAGREIEKIGS 320 (497)
T ss_pred --------Ccccccc--------ccceEEEecCCCCCHHHHHHHHHHcCCCceEEeecCcccCCcceeccCccccccCCC
Confidence 1111222 2789999999999999999999988 67899999999999866554332 2234578
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+|+++++++|+| +++..++.+ +.|||+++|++++.||+++++.+.+.|.+|||+|||.
T Consensus 321 ~G~~~~~~~~~i~~-~~~~~~~~~--~~Gel~v~g~~~~~Gy~~~~~~~~~~~~~~~~~TGDl 380 (497)
T PRK06145 321 TGRALAHVEIRIAD-GAGRWLPPN--MKGEICMRGPKVTKGYWKDPEKTAEAFYGDWFRSGDV 380 (497)
T ss_pred cccCCCCceEEEEC-CCCCCCCCC--CceEEEEECcchhhhhcCChHHHHHHHhCCCeeccce
Confidence 99999999999999 888777665 8999999999999999999999999898999999995
No 66
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.9e-48 Score=403.58 Aligned_cols=402 Identities=23% Similarity=0.343 Sum_probs=308.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+...++.+.|.++++.+|+++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 20 ~~~~~i~~~l~~~a~~~p~~~a~~~~---~------~~lTy~~l~~~~~~~a~~L~~~gi~~gd~V~i~~~n~~~~~~~~ 90 (557)
T PRK07059 20 SQYPSLADLLEESFRQYADRPAFICM---G------KAITYGELDELSRALAAWLQSRGLAKGARVAIMMPNVLQYPVAI 90 (557)
T ss_pred CCCCCHHHHHHHHHHHcCCCceEEEc---C------ceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHH
Confidence 44568999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhH-----------
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK----------- 188 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~----------- 188 (501)
|||+++|++++|++|.++.+++.++++.++++++|+++.....+...... .....++..........
T Consensus 91 la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (557)
T PRK07059 91 AAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEAIVVLENFATTVQQVLAK--TAVKHVVVASMGDLLGFKGHIVNFVVRR 168 (557)
T ss_pred HHHHhcCeEEeccCcccCHHHHHHHHHccCceEEEEchhhHHHHHHhhcc--cCCceeEEeccccccccccccccccccc
Confidence 99999999999999999999999999999999999987665443322211 12222222211000000
Q ss_pred --H-HhhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeec--ccc
Q 010774 189 --K-EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVT--GKV 262 (501)
Q Consensus 189 --~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~--~~~ 262 (501)
. ...........+++++... ..........++++++|+|||||||.||+|.++|.+++..+......+... ...
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~ 248 (557)
T PRK07059 169 VKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPAFEKKP 248 (557)
T ss_pred ccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhcccccccC
Confidence 0 0000011223455554433 112223345678999999999999999999999999987654432211100 001
Q ss_pred CCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 263 CSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 263 ~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
......+++.+|++|.+++.. .+.++..|++.++.+. ++..+++.++++++|.+.++|.++..+.+.
T Consensus 249 ~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------- 318 (557)
T PRK07059 249 RPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNPRDIPGFIKELKKYQVHIFPAVNTLYNALLNN---------- 318 (557)
T ss_pred CCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCCcCHHHHHHHHHHhCCeeeecCHHHHHHHHcC----------
Confidence 123457788899999988764 6678888888777653 889999999999999999999999988752
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccc
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTE 419 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE 419 (501)
....+.+++ ++|.++.||+++++.+.++|.+.+++++++.||+||
T Consensus 319 ---------------------------~~~~~~~~~--------~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE 363 (557)
T PRK07059 319 ---------------------------PDFDKLDFS--------KLIVANGGGMAVQRPVAERWLEMTGCPITEGYGLSE 363 (557)
T ss_pred ---------------------------cCcCcCCch--------hheEEEeccccCCHHHHHHHHHHhCCCeeecccccc
Confidence 111222233 789999999999999999999989999999999999
Q ss_pred cCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCC
Q 010774 420 SCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTE 498 (501)
Q Consensus 420 ~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TG 498 (501)
++.+++....+....++++|+|+++++++|+| +++..++.+ +.|||+++|+.++.||+++++.+.+.+ .+|||+||
T Consensus 364 ~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TG 440 (557)
T PRK07059 364 TSPVATCNPVDATEFSGTIGLPLPSTEVSIRD-DDGNDLPLG--EPGEICIRGPQVMAGYWNRPDETAKVMTADGFFRTG 440 (557)
T ss_pred ccchhhcCCCCCCCcCCcccCccCCcEEEEEC-CCCCCCCCC--CceEEEEeCCccchhhhcCHHHHhhhcccCCceecC
Confidence 98876655443334458999999999999999 888877766 899999999999999999999998877 78999999
Q ss_pred CC
Q 010774 499 VH 500 (501)
Q Consensus 499 D~ 500 (501)
|.
T Consensus 441 Dl 442 (557)
T PRK07059 441 DV 442 (557)
T ss_pred cE
Confidence 94
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.3e-48 Score=440.48 Aligned_cols=394 Identities=21% Similarity=0.292 Sum_probs=313.2
Q ss_pred CCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH
Q 010774 38 SPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII 117 (501)
Q Consensus 38 ~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~ 117 (501)
.+....++.+.|.++++++|+++|+++. .+ +.+||+||.++++++|++|.+. +++||+|+++++|++++++
T Consensus 610 ~~~~~~~l~~~~~~~a~~~p~~~a~~~~---~~-----~~~Ty~el~~~~~~~a~~L~~~-~~~g~~V~i~~~n~~~~~~ 680 (1146)
T PRK08633 610 RKEALPPLAEAWIDTAKRNWSRLAVADS---TG-----GELSYGKALTGALALARLLKRE-LKDEENVGILLPPSVAGAL 680 (1146)
T ss_pred hcCCCCCHHHHHHHHHHhcCCCcEEEcC---CC-----CcCcHHHHHHHHHHHHHHHHHh-CCCCCeEEEECCCchHHHH
Confidence 3456678999999999999999999854 33 4799999999999999999874 8999999999999999999
Q ss_pred HHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-cCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 118 AMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 118 ~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
+++||+++|++++|++|..+.+++.++++.++++.++++++..+.+.+... ........++..++......
T Consensus 681 ~~la~~~~G~v~v~l~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 752 (1146)
T PRK08633 681 ANLALLLAGKVPVNLNYTASEAALKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKIS-------- 752 (1146)
T ss_pred HHHHHHHcCCEEEEeCCCcCHHHHHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccc--------
Confidence 999999999999999999999999999999999999998765554432110 01112233444332111000
Q ss_pred eEeeHHHHHhcCCCC------CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEE
Q 010774 197 SCFSWEEFLQLGTLD------CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~------~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 270 (501)
....+++.......+ .......++++++++|||||||.||+|.+||+++..........+ ....+|+++
T Consensus 753 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l 827 (1146)
T PRK08633 753 KVDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVF-----NLRNDDVIL 827 (1146)
T ss_pred hhHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 001111111111000 001334578999999999999999999999999999888776665 678899999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHH
Q 010774 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEF 347 (501)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~ 347 (501)
+.+|++|.+++.. .+.++..|+++++.+. ++..+++.++++++|++.++|++++.+++.
T Consensus 828 ~~~p~~h~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------ 889 (1146)
T PRK08633 828 SSLPFFHSFGLTVTLWLPLLEGIKVVYHPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRN------------------ 889 (1146)
T ss_pred EcCcHHHHHhHHHHHHHHHHCCCEEEEeCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhc------------------
Confidence 9999999999986 7889999999988764 899999999999999999999999988752
Q ss_pred HHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecc
Q 010774 348 AYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTS 427 (501)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~ 427 (501)
+..++.++ +++|.+++||+++++++.+++++.+|+++++.||+||++++++..
T Consensus 890 -------------------~~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~ 942 (1146)
T PRK08633 890 -------------------KKLHPLMF--------ASLRLVVAGAEKLKPEVADAFEEKFGIRILEGYGATETSPVASVN 942 (1146)
T ss_pred -------------------cccCcccC--------CCeeeEEEcCCcCCHHHHHHHHHHhCCCeecccccccCcceEEEe
Confidence 11222223 389999999999999999999999999999999999998876654
Q ss_pred cCCC---------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhcc----Cc
Q 010774 428 LADV---------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD----GW 494 (501)
Q Consensus 428 ~~~~---------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~d----gw 494 (501)
..+. ..+++++|+|+||++++|+|.+++++++.+ +.|||+++|++++.||+++++.+++.+.+ ||
T Consensus 943 ~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~~ 1020 (1146)
T PRK08633 943 LPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETFEELPPG--EDGLILIGGPQVMKGYLGDPEKTAEVIKDIDGIGW 1020 (1146)
T ss_pred cCcccccccccccCCCCCCccccCCCCEEEEEcCCCCccCCCC--CceEEEEcCCCccccccCCccchHHHhhcCCCCCe
Confidence 3221 124578999999999999994456666655 89999999999999999999999988866 99
Q ss_pred ccCCCC
Q 010774 495 FHTEVH 500 (501)
Q Consensus 495 ~~TGD~ 500 (501)
|+|||.
T Consensus 1021 ~~TGD~ 1026 (1146)
T PRK08633 1021 YVTGDK 1026 (1146)
T ss_pred EECCCE
Confidence 999995
No 68
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=6.3e-48 Score=410.92 Aligned_cols=402 Identities=15% Similarity=0.142 Sum_probs=297.9
Q ss_pred CCCCCCCHHH-HHHHHHHhCCCCcceEEeeccCCC--CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh
Q 010774 38 SPAGLESPWQ-FFCDSAKRIPNNQMLGGRKVSDGK--VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 38 ~~~~~~tl~~-~l~~~a~~~p~~~al~~~~~~~~~--~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 114 (501)
++....|+.+ .|++++..+|+++|+++. +.. +...+.+||+||.++++++|++|+++|+++||+|+++++|+++
T Consensus 169 f~g~~ln~~~~~l~~~~~~~pd~~Ai~~~---~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrVai~~pn~~e 245 (728)
T PLN03052 169 LPGAVLNVAECCLTPKPSKTDDSIAIIWR---DEGSDDLPVNRMTLSELRSQVSRVANALDALGFEKGDAIAIDMPMNVH 245 (728)
T ss_pred CCCCEeEHHHHHHHHHhccCCCCeEEEEE---CCCCCCCceEEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHH
Confidence 3344455655 566666678999999987 432 2345789999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh------hhhhcCccCCCCccEEEEecCCChhhH
Q 010774 115 WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP------SILSCLPRCCLYLKTIVSFANVSSSQK 188 (501)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~ 188 (501)
+++++|||+++|++++|++|.++.+++.++++.++++++|+++.... ...... +... ..++++........
T Consensus 246 ~via~LA~~~~Gav~vpi~p~~~~~~l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~-~~~~--~~~iv~~~~~~~~~ 322 (728)
T PLN03052 246 AVIIYLAIILAGCVVVSIADSFAPSEIATRLKISKAKAIFTQDVIVRGGKSIPLYSRVV-EAKA--PKAIVLPADGKSVR 322 (728)
T ss_pred HHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEEcCccccCCcccchHHHHH-HhcC--CcEEEEeCCCCccc
Confidence 99999999999999999999999999999999999999999875321 110100 0001 12333321110000
Q ss_pred HHhhhcCceEeeHHHHHhcCC-----CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC
Q 010774 189 KEAEELGVSCFSWEEFLQLGT-----LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC 263 (501)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~ 263 (501)
. ........|++++.... ..........+++++|+|||||||.||||+++|.+++.........+ .+
T Consensus 323 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~-----~l 394 (728)
T PLN03052 323 V---KLREGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHL-----DI 394 (728)
T ss_pred c---ccccCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhc-----CC
Confidence 0 00001235666654321 01111223568999999999999999999999999877665544333 67
Q ss_pred CCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhH
Q 010774 264 SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (501)
Q Consensus 264 ~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (501)
..+|++++..|+.|.++...++.+|+.|+++++..+ ++..+++.++++++|++.++|++++.+.+.
T Consensus 395 ~~~d~~~~~~~l~w~~g~~~v~~~L~~Gat~vl~~g~p~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~------------ 462 (728)
T PLN03052 395 RKGDIVCWPTNLGWMMGPWLVYASLLNGATLALYNGSPLGRGFAKFVQDAKVTMLGTVPSIVKTWKNT------------ 462 (728)
T ss_pred CCCcEEEECCCcHHHhHHHHHHHHHHhCCEEEEeCCCCCCChHHHHHHHHCCCEEEECHHHHHHHHhc------------
Confidence 889999999999999998778899999999999875 557899999999999999999999988651
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC-CCeeeeeccccc
Q 010774 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTES 420 (501)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~l~~~yG~tE~ 420 (501)
...+.++++ +||.+++||++++++...++.+.++ ..+.+.||+||+
T Consensus 463 -------------------------~~~~~~dls--------sLr~i~s~Ge~l~~~~~~~~~~~~~~~~i~~~yG~TE~ 509 (728)
T PLN03052 463 -------------------------NCMAGLDWS--------SIRCFGSTGEASSVDDYLWLMSRAGYKPIIEYCGGTEL 509 (728)
T ss_pred -------------------------CCcccCChh--------heeEEEecCCCCCHHHHHHHHHhcCCCCeEeeccChhh
Confidence 112334454 8999999999999999888888765 579999999999
Q ss_pred CcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCC--ccccccCCcccchhhhc-----cC
Q 010774 421 CSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT--LFSGYYKRPDLTEEVIV-----DG 493 (501)
Q Consensus 421 ~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~--v~~gY~~~~~~~~~~~~-----dg 493 (501)
++.+..........++++|.|++|++++|+| ++|++++.+..+.|||+++++. ...+|+++.. ...-|. .|
T Consensus 510 ~~~~~~~~~~~~~~~g~~g~p~~g~~v~v~d-~~g~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~~-~~~yf~~~p~~~g 587 (728)
T PLN03052 510 GGGFVTGSLLQPQAFAAFSTPAMGCKLFILD-DSGNPYPDDAPCTGELALFPLMFGASSTLLNADH-YKVYFKGMPVFNG 587 (728)
T ss_pred CcccccCCCCCCCCCCccccCCCCceEEEEC-CCCCCCCCCCCceEEEEEeCCCCCCCccccCchh-hhhhhhcCCCCCC
Confidence 8754433222234458999999999999999 9998887653246999998653 3356776542 222221 24
Q ss_pred --cccCCCC
Q 010774 494 --WFHTEVH 500 (501)
Q Consensus 494 --w~~TGD~ 500 (501)
||+|||.
T Consensus 588 ~~~~~tGDl 596 (728)
T PLN03052 588 KILRRHGDI 596 (728)
T ss_pred CEEEecCce
Confidence 9999996
No 69
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=7.5e-48 Score=404.08 Aligned_cols=393 Identities=20% Similarity=0.262 Sum_probs=293.6
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...|+.++|.+.++.+|+++|+++. + .++||+||.++++++|++|.++|+++||+|+|+++|++++++++|
T Consensus 12 ~~~~~~~~l~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~~a~~L~~~Gl~~gd~Vai~~~n~~e~~~~~l 82 (579)
T PLN03102 12 VPLTPITFLKRASECYPNRTSIIYG---K------TRFTWPQTYDRCCRLAASLISLNITKNDVVSVLAPNTPAMYEMHF 82 (579)
T ss_pred ccccHHHHHHHHHHhCCCCeEEEEC---C------cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 4467899999999999999999875 3 379999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC----CCccEEEEecCCChhhHHHhhhcCc
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC----LYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
||+++|++++|++|.++.+++.++|+.++++++|++.+....+........ .....++.++....... ...
T Consensus 83 a~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 157 (579)
T PLN03102 83 AVPMAGAVLNPINTRLDATSIAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKR-----PSS 157 (579)
T ss_pred HHHhcCcEEeeccccCCHHHHHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccC-----Ccc
Confidence 999999999999999999999999999999999998876654433221110 01123333332111000 001
Q ss_pred eEeeHHHHHhcCCCCCC-----CCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEE
Q 010774 197 SCFSWEEFLQLGTLDCE-----LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFS 271 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~ 271 (501)
....+++++........ ......+++++|+|||||||.||+|+++|.++..........+ .+...+++++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~ 232 (579)
T PLN03102 158 EELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGW-----EMGTCPVYLW 232 (579)
T ss_pred cccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhc-----CCCCCCeEEe
Confidence 12345555543311110 1223568899999999999999999999999755443322222 4556778999
Q ss_pred ecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHH
Q 010774 272 FLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (501)
Q Consensus 272 ~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
.+|++|..++...+.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+++.....
T Consensus 233 ~~pl~h~~g~~~~~~~~~~g~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----------------- 295 (579)
T PLN03102 233 TLPMFHCNGWTFTWGTAARGGTSVCMRHVTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLD----------------- 295 (579)
T ss_pred cCChhhhcchhHHHHHHHhcCcEEeeccCChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccc-----------------
Confidence 9999999998877778888998887764 8889999999999999999999999987531100
Q ss_pred HHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC
Q 010774 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (501)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~ 430 (501)
...+ .+++.+++||+++++.+.+++++ +|..+++.||+||+++.++.....
T Consensus 296 --------------------~~~~--------~~~~~~~~gg~~~~~~~~~~~~~-~g~~i~~~YG~tE~~~~~~~~~~~ 346 (579)
T PLN03102 296 --------------------LSPR--------SGPVHVLTGGSPPPAALVKKVQR-LGFQVMHAYGLTEATGPVLFCEWQ 346 (579)
T ss_pred --------------------cCCc--------ccceEEEECCCCCCHHHHHHHHH-cCCeEEeecCccccCccccccccc
Confidence 0001 25778999999999999999876 589999999999998654322110
Q ss_pred C-------------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccC
Q 010774 431 V-------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHT 497 (501)
Q Consensus 431 ~-------------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~T 497 (501)
. ....+..+.+++++ +|++.+.+..++.+.++.|||+|+|+.++.|||++++.+.+.|.+|||+|
T Consensus 347 ~~~~~~~~~~~~~~~~~~g~~~~~~~~v--~i~~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~~gw~~T 424 (579)
T PLN03102 347 DEWNRLPENQQMELKARQGVSILGLADV--DVKNKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFKHGWLNT 424 (579)
T ss_pred cccccCCcccccccccCCCcccccccce--EEeccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhccCceec
Confidence 0 01123444555554 45552345555544346899999999999999999999999999999999
Q ss_pred CCC
Q 010774 498 EVH 500 (501)
Q Consensus 498 GD~ 500 (501)
||.
T Consensus 425 GDl 427 (579)
T PLN03102 425 GDV 427 (579)
T ss_pred Cce
Confidence 995
No 70
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.1e-47 Score=402.45 Aligned_cols=389 Identities=24% Similarity=0.399 Sum_probs=308.8
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|.+.++++|+++|+++. +.+ +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++||
T Consensus 17 ~~~l~~~l~~~~~~~p~~~a~~~~---~~~----~~~Ty~~l~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~~a 89 (558)
T PRK12583 17 TQTIGDAFDATVARFPDREALVVR---HQA----LRYTWRQLADAVDRLARGLLALGVQPGDRVGIWAPNCAEWLLTQFA 89 (558)
T ss_pred cCcHHHHHHHHHHHCCCCeEEEec---CCC----cEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCChHHHHHHHH
Confidence 367999999999999999999875 432 5799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCc------------cCCCCccEEEEecCCC
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLP------------RCCLYLKTIVSFANVS 184 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~-----~~~~~~~------------~~~~~~~~v~~~~~~~ 184 (501)
|+++|++++++++.++.+++.++++.++++++|++..... .+..... .....+..++......
T Consensus 90 ~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (558)
T PRK12583 90 TARIGAILVNINPAYRASELEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRGVVSLAPAP 169 (558)
T ss_pred HHhhCCEEEecCCCCCHHHHHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceEEEEecCCC
Confidence 9999999999999999999999999999999999865321 1111100 0111223333333221
Q ss_pred hhhHHHhhhcCceEeeHHHHHhcCCC------CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeee
Q 010774 185 SSQKKEAEELGVSCFSWEEFLQLGTL------DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV 258 (501)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~ 258 (501)
. .....++++...... .........+++++++|||||||.||+|.++|.++...+......+
T Consensus 170 ~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~-- 237 (558)
T PRK12583 170 P----------PGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESL-- 237 (558)
T ss_pred C----------ccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHh--
Confidence 1 012233333322110 0111223567899999999999999999999999998887766555
Q ss_pred ccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhh
Q 010774 259 TGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKIS 335 (501)
Q Consensus 259 ~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~ 335 (501)
++..+|++++..|++|.+|... ++.++..|+++++... ++..+++.++++++|+++++|.++..+++...
T Consensus 238 ---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~---- 310 (558)
T PRK12583 238 ---GLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNEAFDPLATLQAVEEERCTALYGVPTMFIAELDHPQ---- 310 (558)
T ss_pred ---CCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEeecCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcccc----
Confidence 7788999999999999999875 7788999999987643 89999999999999999999999887764210
Q ss_pred cCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC-CCeeee
Q 010774 336 SGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQG 414 (501)
Q Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~l~~~ 414 (501)
....++ +++|.+++||+++++++.+++.+.++ ..+++.
T Consensus 311 ---------------------------------~~~~~~--------~~lr~i~~~G~~~~~~~~~~~~~~~~~~~i~~~ 349 (558)
T PRK12583 311 ---------------------------------RGNFDL--------SSLRTGIMAGAPCPIEVMRRVMDEMHMAEVQIA 349 (558)
T ss_pred ---------------------------------ccCCCc--------hhheEEEecCCCCCHHHHHHHHHHcCCcceecc
Confidence 011122 27999999999999999999998885 479999
Q ss_pred ecccccCcceecccCCC--CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c
Q 010774 415 YGLTESCSGCFTSLADV--FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V 491 (501)
Q Consensus 415 yG~tE~~~~~~~~~~~~--~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~ 491 (501)
||+||++.+++...... .....++|+|+|++.++|+| +++.+++.+ +.|||+|+|+.++.||+++++.+.+.+ .
T Consensus 350 YG~tE~~~~~~~~~~~~~~~~~~~~vG~p~~~~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~ 426 (558)
T PRK12583 350 YGMTETSPVSLQTTAADDLERRVETVGRTQPHLEVKVVD-PDGATVPRG--EIGELCTRGYSVMKGYWNNPEATAESIDE 426 (558)
T ss_pred ccccccccceeccCcccccccccCCCCccCCCCeEEEEC-CCCCCCCCC--CeeEEEEEeCccchhhcCChHHHHhhcCC
Confidence 99999998776543322 23457899999999999999 777766665 899999999999999999999998877 7
Q ss_pred cCcccCCCC
Q 010774 492 DGWFHTEVH 500 (501)
Q Consensus 492 dgw~~TGD~ 500 (501)
+|||+|||.
T Consensus 427 ~~~~~TGDl 435 (558)
T PRK12583 427 DGWMHTGDL 435 (558)
T ss_pred CCCeeccce
Confidence 899999995
No 71
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=1.4e-48 Score=448.17 Aligned_cols=385 Identities=16% Similarity=0.106 Sum_probs=293.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCC---CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGK---VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~---~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
..++.++|+++++.+|+++|+++. ... ....+.+||+||.++++++|++|.+.|+++||+|+|+++|+++++++
T Consensus 235 ~~~l~~~~~~~a~~~pd~~A~~~~---~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~gv~~g~~V~i~~~~~~~~i~~ 311 (1389)
T TIGR03443 235 RGAIHDIFADNAEKHPDRTCVVET---PSFLDPSSKTRSFTYKQINEASNILAHYLLKTGIKRGDVVMIYAYRGVDLVVA 311 (1389)
T ss_pred cCcHHHHHHHHHHhCCCCeEEEec---cccccccCCCceeeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEecCCHHHHHH
Confidence 357999999999999999999864 211 12236899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh---hhhhhcCccCC---CCccEEEEecCCChhhHHHhh
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---PSILSCLPRCC---LYLKTIVSFANVSSSQKKEAE 192 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~---~~~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~ 192 (501)
+|||+++|++++|++|.++.+++.++++.++++++++..... ..+........ ..+..+. +....... ..
T Consensus 312 ~lA~l~~G~~~vpldp~~p~~~~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~ 387 (1389)
T TIGR03443 312 VMGVLKAGATFSVIDPAYPPARQTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALA-LQDDGSLV---GG 387 (1389)
T ss_pred HHHHHhhCcEEeccCCCCcHHHHHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEE-eccccccc---cc
Confidence 999999999999999999999999999999999999876421 11111110000 0111111 11100000 00
Q ss_pred hcCceEeeHHHHHhcC---CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEE
Q 010774 193 ELGVSCFSWEEFLQLG---TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTY 269 (501)
Q Consensus 193 ~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~ 269 (501)
... ....+.+... ..........++++++|+|||||||.||||+++|+++.+.+.++...+ .+..+|++
T Consensus 388 --~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~ 459 (1389)
T TIGR03443 388 --SLE-GGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRF-----GLSENDKF 459 (1389)
T ss_pred --ccc-cccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEE
Confidence 000 0000011000 001111234578899999999999999999999999999988877666 78889999
Q ss_pred EEecChHHHHHHHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHH
Q 010774 270 FSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (501)
Q Consensus 270 l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (501)
+...|++|..++..++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+.....
T Consensus 460 ~~~~~~~~d~~~~~i~~~L~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~-------------- 525 (1389)
T TIGR03443 460 TMLSGIAHDPIQRDMFTPLFLGAQLLVPTADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQAT-------------- 525 (1389)
T ss_pred EEecCceecchHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhccc--------------
Confidence 999999999888889999999999998764 67899999999999999999999988753100
Q ss_pred HHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcce
Q 010774 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGC 424 (501)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~ 424 (501)
.++ +++|.+++||+++++...+++.+.+ +++++|.||+||++.++
T Consensus 526 --------------------------~~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~ 571 (1389)
T TIGR03443 526 --------------------------TPI--------PSLHHAFFVGDILTKRDCLRLQTLAENVCIVNMYGTTETQRAV 571 (1389)
T ss_pred --------------------------ccC--------CCccEEEEecccCCHHHHHHHHHhCCCCEEEECccCCccceeE
Confidence 001 3899999999999999999988865 78999999999998776
Q ss_pred ecccCCC----------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh
Q 010774 425 FTSLADV----------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (501)
Q Consensus 425 ~~~~~~~----------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~ 490 (501)
+...... .....++|+|+++++++|+| +++...+...|++|||||+|++++.||+|+|+.|++.|
T Consensus 572 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd-~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f 646 (1389)
T TIGR03443 572 SYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVN-RNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKF 646 (1389)
T ss_pred EEEEccccccccchhhcccCcCcCCCccCCCEEEEEC-CccCCCcCCCCCceEEEecccccchhcCCChhHhhhhc
Confidence 6432211 01235789999999999999 65543344445999999999999999999999999887
No 72
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=2.3e-48 Score=417.44 Aligned_cols=378 Identities=19% Similarity=0.268 Sum_probs=291.7
Q ss_pred CCCCHHHHHHHHHHhCCC-CcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~-~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
...|+.+.|.++++++|+ ++|+.+. +. +.+||+||.++++++|++|.+. +++||+|+++++|++++++++
T Consensus 202 ~~~t~~~~l~~~~~~~p~~~~a~~~~---~~-----~~~Ty~el~~~~~~lA~~L~~~-~~~gd~Val~~~n~~e~~~~~ 272 (718)
T PRK08043 202 PRETLYEALLSAQYRYGAGKPCIEDV---NF-----TPDSYRKLLKKTLFVGRILEKY-SVEGERIGLMLPNATISAAVI 272 (718)
T ss_pred CCCCHHHHHHHHHHHhCCCCcceEcC---CC-----CcccHHHHHHHHHHHHHHHHHh-cCCCceEEEEcCCcHHHHHHH
Confidence 457899999999999998 5777532 11 4799999999999999999987 599999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhh-hcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
|||+++|++++|+++.++.+++.++++.++++++|++.+..+... ........... ++.+.+....
T Consensus 273 lA~~~~G~v~vpl~~~~~~~~l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~-~i~~~~~~~~------------ 339 (718)
T PRK08043 273 FGASLRRRIPAMMNYTAGVKGLTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVR-WVYLEDLKDD------------ 339 (718)
T ss_pred HHHHHcCCcccccccCcCHHHHHHHHHHcCCcEEEEcHHHHhhccCCChhhhhcccc-EEEhhhhhhh------------
Confidence 999999999999999999999999999999999999876543210 00111111111 2222211000
Q ss_pred eeHHH--H--HhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecC
Q 010774 199 FSWEE--F--LQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (501)
Q Consensus 199 ~~~~~--~--~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (501)
..+.+ . ..............++++++++|||||||.||||++||.++++....+...+ .+..+|++++.+|
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~P 414 (718)
T PRK08043 340 VTTADKLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIA-----DFTPNDRFMSALP 414 (718)
T ss_pred cchhHHHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhh-----CCCccCeEEEcCc
Confidence 00100 0 0000011111234568999999999999999999999999998887766555 7788999999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNY 351 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 351 (501)
++|.+++.. ++.++..|+++++.+. +...+++.++++++|+++++|+++..+.+.
T Consensus 415 l~h~~g~~~~~~~~l~~G~~vv~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~---------------------- 472 (718)
T PRK08043 415 LFHSFGLTVGLFTPLLTGAEVFLYPSPLHYRIVPELVYDRNCTVLFGTSTFLGNYARF---------------------- 472 (718)
T ss_pred chhhhhhHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHhcCCeEEEchHHHHHHhhhh----------------------
Confidence 999999875 7789999999998763 677888999999999999999998776431
Q ss_pred HhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC
Q 010774 352 KLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (501)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~ 431 (501)
.+..++ ++||.+++||+++++++.+.|++.+|+.+++.||+||++++++.....
T Consensus 473 -----------------~~~~~~--------~~lr~i~~gg~~l~~~~~~~~~~~~g~~l~~~YG~TE~~~~~~~~~~~- 526 (718)
T PRK08043 473 -----------------ANPYDF--------ARLRYVVAGAEKLQESTKQLWQDKFGLRILEGYGVTECAPVVSINVPM- 526 (718)
T ss_pred -----------------cCcccc--------cceEEEEEeCccCCHHHHHHHHHHcCCCeecccCcccccceEEecCCc-
Confidence 011122 389999999999999999999998999999999999998776654332
Q ss_pred CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccC--Cccc-------chhh-hccCcccCCCC
Q 010774 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYK--RPDL-------TEEV-IVDGWFHTEVH 500 (501)
Q Consensus 432 ~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~--~~~~-------~~~~-~~dgw~~TGD~ 500 (501)
...++++|+|+||++++|+| +++. ++.|||+++|++++.|||+ +++. +.+. +.+|||+|||.
T Consensus 527 ~~~~~svG~p~pg~~~~i~d-~~~~------~~~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDl 598 (718)
T PRK08043 527 AAKPGTVGRILPGMDARLLS-VPGI------EQGGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDI 598 (718)
T ss_pred ccCCCCCCCcCCCCeeEEec-CCCC------CCceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCE
Confidence 23468999999999999998 5542 2579999999999999998 4442 2222 25799999995
No 73
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=1e-47 Score=400.20 Aligned_cols=384 Identities=17% Similarity=0.202 Sum_probs=305.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++.++|+++++ |+++|+++. + +.+||.||.++++++|+.|.+.|+++||+|+++++|+++++++++|
T Consensus 24 ~~~~~~~~~~~a~--p~~~a~~~~---~------~~~Ty~el~~~~~~la~~L~~~g~~~g~~V~v~~~n~~~~~~~~la 92 (536)
T PRK10946 24 DLPLTDILTRHAA--SDAIAVICG---E------RQFSYRELNQASDNLACSLRRQGIKPGDTALVQLGNVAEFYITFFA 92 (536)
T ss_pred CccHHHHHHHhhC--CCCeEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCChHHHHHHHHH
Confidence 5689999999887 999999865 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh----hhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI----PSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
|+++|++++++.+.....++..+++.++++.++++.... ....+...........++..... .
T Consensus 93 ~~~~G~v~v~~~~~~~~~~~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~------------ 159 (536)
T PRK10946 93 LLKLGVAPVNALFSHQRSELNAYASQIEPALLIADRQHALFSDDDFLNTLVAEHSSLRVVLLLNDD-G------------ 159 (536)
T ss_pred HHHcCeEEecCCccccHHHHHHHHhhcCCCEEEEeccccccchHHHHHHHHhhCCCceEEEEecCC-C------------
Confidence 999999888777777788899999999999999986531 11112222222233333333221 0
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHH
Q 010774 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
...+.+++.............++++++++|||||||.||+|.+||+++...+......+ .+..+|++++.+|++|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~-----~~~~~~~~l~~~p~~h 234 (536)
T PRK10946 160 EHSLDDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEIC-----GFTPQTRYLCALPAAH 234 (536)
T ss_pred CccHHHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCceEEEecCccc
Confidence 12344444333222223344678999999999999999999999999999988766655 7788999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|.+++.+++.......
T Consensus 235 ~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~~------------------- 295 (536)
T PRK10946 235 NYPMSSPGALGVFLAGGTVVLAPDPSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGGS------------------- 295 (536)
T ss_pred cccchhhhHHHHhhcCcEEEECCCCCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccCc-------------------
Confidence 888763 6788999999988764 889999999999999999999999998764311100
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 434 (501)
...+ +++|.+++||+++++++.+.+.+.+|+++++.||+||++..+..........
T Consensus 296 ----------------~~~~--------~~l~~v~~gg~~l~~~~~~~~~~~~g~~~~~~YG~tE~~~~~~~~~~~~~~~ 351 (536)
T PRK10946 296 ----------------RAQL--------ASLKLLQVGGARLSETLARRIPAELGCQLQQVFGMAEGLVNYTRLDDSDERI 351 (536)
T ss_pred ----------------cccc--------cceeEEEECCCCCCHHHHHHHHHhcCCeEEEeecccccceeeecCCCccccc
Confidence 0001 3899999999999999999999989999999999999654433221122234
Q ss_pred cCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 435 IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.+++|+|+ |++.++|+| +++++++.| +.|||+++|+.++.||+++++.+++.| .||||+|||.
T Consensus 352 ~~~~G~p~~~~~~v~i~d-~~~~~~~~g--~~Gel~v~g~~~~~GY~~~~~~t~~~~~~d~~~~TGDl 416 (536)
T PRK10946 352 FTTQGRPMSPDDEVWVAD-ADGNPLPQG--EVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDL 416 (536)
T ss_pred cccCCcccCCCceEEEEC-CCCCCCCCC--CccEEEEecCccchhhcCCcccchhhcccCCceecCce
Confidence 57899999 899999999 888877766 999999999999999999999999888 7899999994
No 74
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=7.7e-48 Score=408.42 Aligned_cols=400 Identities=17% Similarity=0.162 Sum_probs=296.5
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 39 PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 39 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
+....|+.+.+.. +.++++|+++. +. .+..+.+||+||.+++.++|++|+++|+++||+|+++++|+++++++
T Consensus 83 ~~~~~n~~~~~~~---~~~~~~a~~~~---~~-~~~~~~~Ty~eL~~~v~~lA~~L~~~Gv~~GdrV~i~~~n~~e~~~~ 155 (652)
T TIGR01217 83 PGARLNYAENLLR---AAGTEPALLYV---DE-THEPAPVTWAELRRQVASLAAALRALGVRPGDRVSGYLPNIPQAVVA 155 (652)
T ss_pred CCCeeeHHHHHhc---cCCCCeEEEEE---CC-CCCeeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHH
Confidence 3445566666654 35789999886 33 34457899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh---------hhhhhcCccCCCCccEEEEecCCChhhHH
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI---------PSILSCLPRCCLYLKTIVSFANVSSSQKK 189 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~---------~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 189 (501)
+|||+++|++++|+++.++.+++.++++.++++++|+++... +.+.+.. .....++.++.+.........
T Consensus 156 ~lA~~~~Gav~vp~~~~~~~~~l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~~~ 234 (652)
T TIGR01217 156 MLATASVGAIWSSCSPDFGARGVLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVR-KELPTLRAVVHIPYLGPRETE 234 (652)
T ss_pred HHHHHHhCeEEEecCCCCCHHHHHHHHHhcCCcEEEEccccccCCcccchHHHHHHHH-hcCCCccEEEEEeCCCCcccc
Confidence 999999999999999999999999999999999999987542 2222222 122344555554322100000
Q ss_pred HhhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHH-HhhcceeeeeccccCCCCc
Q 010774 190 EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAE-VLSVDQMFVVTGKVCSEED 267 (501)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~-~~~~~~~~~~~~~~~~~~d 267 (501)
.. .......+++++... ...........+++++|+|||||||.||||+++|++++.. .......+ ++..+|
T Consensus 235 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d 307 (652)
T TIGR01217 235 AP--KIDGALDLEDFTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHC-----DLGPGD 307 (652)
T ss_pred cc--cccCcccHHHHHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhcc-----CCCCCc
Confidence 00 001123566665442 1122223445689999999999999999999999987643 33333334 678899
Q ss_pred EEEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHH
Q 010774 268 TYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (501)
Q Consensus 268 ~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (501)
++++..|+.|..+ .+++.+|+.|+++++..+ ++..+++.++++++|++..+|++++.+.+.
T Consensus 308 ~~~~~~~~~~~~~-~~~~~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~------------- 373 (652)
T TIGR01217 308 RLFYYTTTGWMMW-NWLVSGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKA------------- 373 (652)
T ss_pred EEEEeCCcchhhh-HHHHHHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhc-------------
Confidence 9999999999754 345689999999999853 678999999999999988777777665431
Q ss_pred HHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC--CCeeeeeccccc
Q 010774 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG--APLTQGYGLTES 420 (501)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~--~~l~~~yG~tE~ 420 (501)
.......++++ +||.+++||+++++++.+++.+.++ +.+.+.||+||+
T Consensus 374 ----------------------~~~~~~~~~l~--------sLr~i~~gGe~l~~~~~~~~~~~~~~~~~~~~~yG~TE~ 423 (652)
T TIGR01217 374 ----------------------GVHPARTHDLS--------ALQCVASTGSPLPPDGFRWVYDEIKADVWLASISGGTDI 423 (652)
T ss_pred ----------------------CCCccccCChh--------heeEEEeecCCCCHHHHHHHHHHhCCCceEEeccCHHHH
Confidence 00011233444 8999999999999999999998875 457789999997
Q ss_pred CcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecC--CccccccCCcccch--hh-h--ccC
Q 010774 421 CSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN--TLFSGYYKRPDLTE--EV-I--VDG 493 (501)
Q Consensus 421 ~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~--~v~~gY~~~~~~~~--~~-~--~dg 493 (501)
++.............+++|.|.+|++++|+| ++|++++ ++.|||+++|| +++.|||++++.++ +. | .+|
T Consensus 424 ~~~~~~~~~~~~~~~g~~g~p~~g~~v~ivd-~~g~~~~---g~~GEl~v~gp~p~~~~gy~~~~~~t~~~~~~~~~~~g 499 (652)
T TIGR01217 424 CSCFAGANPTLPVHIGEIQAPGLGTAVQSWD-PEGKPVT---GEVGELVCTNPMPSMPIRFWNDPDGSKYRDAYFDTYPG 499 (652)
T ss_pred hccccCCCCCCCCcCCccCCCcCCCceEEEC-CCCCCCC---CCccEEEEecCCCccccceeCCCccchhHHhhhcCCCC
Confidence 6443332222233458899999999999999 8888763 48999999996 68999999998664 22 2 268
Q ss_pred cccCCCCC
Q 010774 494 WFHTEVHR 501 (501)
Q Consensus 494 w~~TGD~~ 501 (501)
||+|||.+
T Consensus 500 ~~~tGDlg 507 (652)
T TIGR01217 500 VWRHGDWI 507 (652)
T ss_pred EEEcCCcE
Confidence 99999963
No 75
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.2e-47 Score=400.16 Aligned_cols=399 Identities=23% Similarity=0.360 Sum_probs=307.2
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
..++.+.|.++++.+|+++|+++. + +.+||+||.++++++|+.|. +.|+++||+|+++++|++++++++|
T Consensus 24 ~~~~~~~l~~~~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 94 (560)
T PRK08751 24 FRTVAEVFATSVAKFADRPAYHSF----G-----KTITYREADQLVEQFAAYLLGELQLKKGDRVALMMPNCLQYPIATF 94 (560)
T ss_pred CCcHHHHHHHHHHhCCCCceEEEC----C-----ceeeHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHH
Confidence 357999999999999999999864 3 48999999999999999997 6899999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhh-----------HH
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ-----------KK 189 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-----------~~ 189 (501)
||+++|++++|++|.++.+++.++++.++++.+++++.....+....... ....++......... ..
T Consensus 95 A~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (560)
T PRK08751 95 GVLRAGLTVVNVNPLYTPRELKHQLIDSGASVLVVIDNFGTTVQQVIADT--PVKQVITTGLGDMLGFPKAALVNFVVKY 172 (560)
T ss_pred HHHHhCeEEeccCccCCHHHHHHHHHhcCCeEEEEcchhHHHHHHHhhCC--CccEEEEechhhhcccccchhhhhhhhh
Confidence 99999999999999999999999999999999999887665543332211 122233221000000 00
Q ss_pred ----HhhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC
Q 010774 190 ----EAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (501)
Q Consensus 190 ----~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (501)
...........+.+..... ...........+++++++|||||||.||+|.++|.++...+......+... ....
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~-~~~~ 251 (560)
T PRK08751 173 VKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAGT-GKLE 251 (560)
T ss_pred hhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhccc-cccC
Confidence 0000001122344443322 111222334678899999999999999999999999988776544332111 0122
Q ss_pred C-CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChh
Q 010774 265 E-EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGAL 340 (501)
Q Consensus 265 ~-~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~ 340 (501)
. .++++..+|++|.+++.. .+.++..|+++++... ++..+++.++++++|++.++|.++..+.+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~------------ 319 (560)
T PRK08751 252 EGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISNPRDMPGFVKELKKTRFTAFTGVNTLFNGLLN------------ 319 (560)
T ss_pred CCCceEEEecChHHHHHHHHhhhhHhhccceEEEecCcCCHHHHHHHHHhcceeEecChHHHHHHHHc------------
Confidence 3 467788899999999875 5667777887766543 88999999999999999999999988765
Q ss_pred HHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeeccccc
Q 010774 341 SKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTES 420 (501)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~ 420 (501)
.+...+++++ ++|.+++||+++++.+.+.|++.+++.+++.||+||+
T Consensus 320 -------------------------~~~~~~~~l~--------~lr~v~~gG~~~~~~~~~~~~~~~~~~~~~~YG~tE~ 366 (560)
T PRK08751 320 -------------------------TPGFDQIDFS--------SLKMTLGGGMAVQRSVAERWKQVTGLTLVEAYGLTET 366 (560)
T ss_pred -------------------------CcCcCCcchh--------hheeeeeCCCCCCHHHHHHHHHHhCCeEEEeeccccC
Confidence 1112233444 7899999999999999999999889999999999999
Q ss_pred CcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCC
Q 010774 421 CSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEV 499 (501)
Q Consensus 421 ~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD 499 (501)
+.+++....+.....+++|.|+++++++|+| +++..++.+ +.|||+|+|+.++.||+++++.+++.| .+|||+|||
T Consensus 367 ~~~~~~~~~~~~~~~~~vG~~~~~~~v~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~g~~~TGD 443 (560)
T PRK08751 367 SPAACINPLTLKEYNGSIGLPIPSTDACIKD-DAGTVLAIG--EIGELCIKGPQVMKGYWKRPEETAKVMDADGWLHTGD 443 (560)
T ss_pred CCceecccccccccCCCcCccCCCceEEEEC-CCCCCCCCC--CceEEEEecCccchhhcCChhhhhhccccCCCccccc
Confidence 8876655443334457899999999999999 888877665 899999999999999999999998887 689999999
Q ss_pred C
Q 010774 500 H 500 (501)
Q Consensus 500 ~ 500 (501)
.
T Consensus 444 ~ 444 (560)
T PRK08751 444 I 444 (560)
T ss_pred e
Confidence 5
No 76
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=2.6e-47 Score=394.96 Aligned_cols=383 Identities=20% Similarity=0.243 Sum_probs=309.1
Q ss_pred CCHHHHHHHH-HHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDS-AKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~-a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
++..++|+++ ++.+|+++|+++. + ..+||.||.++++++|++|.+.|+++|++|+++++|+++++++++|
T Consensus 4 ~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~~l~~~~~~~a~~L~~~g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 4 NAAEDLLDRNVVEGRGGKTAFIDD---I------SSLSYGELEAQVRRLGAALRRLGVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred hHHHHHHHHHHhcccCCceEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHH
Confidence 3456777776 6779999999754 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++..+.+++.++++.+++++++++.+....+.+... .......++..+.... ....+
T Consensus 75 ~~~~G~~~v~l~~~~~~~~l~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-----------~~~~~ 142 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADDYAYMLEDSRARVVFVSGELLPVIKAALG-KSPHLEHRVVVGRPEA-----------GEVQL 142 (508)
T ss_pred HHHcCcEEeeccCCCCHHHHHHHHHhcCCeEEEEchhhHHHHHHHHh-cCCCccEEEEeCCCCc-----------ccccH
Confidence 99999999999999999999999999999999999876665543322 1233344444432211 12234
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhh-cceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
.++..............++++++++|||||||.||+|.++|+++...+.. ....+ .+..+|+++..+|++|.++
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 217 (508)
T TIGR02262 143 AELLATESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTL-----GIREDDVVFSAAKLFFAYG 217 (508)
T ss_pred HHHhhcCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhc-----CCCCCCEEEEcCchHHHHH
Confidence 44443322222223445688999999999999999999999999887765 22333 6788999999999999999
Q ss_pred HHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 281 QII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 281 ~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
+.. ++.++..|+++++.+. ++..+++.++++++|.++++|.++..+++..
T Consensus 218 ~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~--------------------------- 270 (508)
T TIGR02262 218 LGNALTFPMSVGATTVLMGERPTPDAVFDRLRRHQPTIFYGVPTLYAAMLADP--------------------------- 270 (508)
T ss_pred HHHHHHHHHHcCceEEEeCCCCCHHHHHHHHHHHCCcEEecchHHHHHHhcCc---------------------------
Confidence 875 6778999999998764 7999999999999999999999888765410
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s 437 (501)
....... +++|.+++||+++++++.+.|.+.+++++++.||+||++.+++....+. ...++
T Consensus 271 ----------~~~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~v~~~YG~tE~~~~~~~~~~~~-~~~~~ 331 (508)
T TIGR02262 271 ----------NLPAEDQ--------VRLRLCTSAGEALPAEVGQRWQARFGVDIVDGIGSTEMLHIFLSNLPGD-VRYGT 331 (508)
T ss_pred ----------ccccccc--------ccceeEEEcCCCCCHHHHHHHHHHhCCchhhCccccccCceeecCCccC-CCCCC
Confidence 0000111 3899999999999999999999999999999999999997665443332 33478
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+|++|++++|+| +++..++.+ ++|||+++|+.++.||+++++.+.+.|.+|||+|||.
T Consensus 332 ~G~~~~g~~v~i~d-~~~~~~~~g--~~Gel~i~~~~~~~gY~~~~~~~~~~~~~~~~~TGD~ 391 (508)
T TIGR02262 332 SGKPVPGYRLRLVG-DGGQDVAAG--EPGELLISGPSSATMYWNNRAKTRDTFQGEWTRSGDK 391 (508)
T ss_pred cCCCCCCcEEEEEC-CCCCCCCCC--CeeEEEEecCccccccCCCHHHhHhhhhcCceeccce
Confidence 99999999999999 888877766 8999999999999999999999998888999999995
No 77
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3e-47 Score=399.35 Aligned_cols=399 Identities=25% Similarity=0.408 Sum_probs=300.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
..+++.+.|.+.++.+|+++|+++. + +.+||+||.+++.++|++|.+.|+++||+|+++++|++++++++|
T Consensus 22 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~~ty~eL~~~~~~la~~L~~~gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 22 DIQPLHKYVEQMASRYPEKKALHFL---G------KDITFSVFHDKVKRFANYLQKLGVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred CcccHHHHHHHHHHHCCCceEEEec---C------eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 3468999999999999999999875 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCC--hh-hHH---Hhhh-
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS--SS-QKK---EAEE- 193 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~-~~~---~~~~- 193 (501)
||+++|++++|++|..+.+++..+++.++++.+++++.....+...... .....++...... .. ... ....
T Consensus 93 A~~~~G~~~vpi~p~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERELEYQLHDSGAKVILCLDLVFPRVTNVQSA--TKIEHVIVTRIADFLPFPKNLLYPFVQKK 170 (563)
T ss_pred HHHHcCeEEeccCcccCHHHHHHHHhccCCeEEEEeccchhhhhccchh--hccceeEEeccccccccccccccchhhcc
Confidence 9999999999999999999999999999999999988654433221110 1111221110000 00 000 0000
Q ss_pred ---------cCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC
Q 010774 194 ---------LGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (501)
Q Consensus 194 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (501)
.......++.+...............+++++++|||||||.||+|.++|++++.........+ .....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~---~~~~~ 247 (563)
T PRK06710 171 QSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWL---YNCKE 247 (563)
T ss_pred cccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhc---cCCCC
Confidence 000001112211111111111122357899999999999999999999999976543322211 00123
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHH
Q 010774 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSK 342 (501)
Q Consensus 265 ~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~ 342 (501)
.++++++..|++|.+++.. ++.+++.|+++++.+. ++..+++.++++++|++.++|+++..+++.
T Consensus 248 ~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------- 314 (563)
T PRK06710 248 GEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPKFDMKMVFEAIKKHKVTLFPGAPTIYIALLNS------------- 314 (563)
T ss_pred CCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCCCCHHHHHHHHHHcCCeEEeccHHHHHHHHcC-------------
Confidence 4568899999999999875 6678999999998765 899999999999999999999999987641
Q ss_pred HHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCc
Q 010774 343 KLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCS 422 (501)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~ 422 (501)
+.....+++ ++|.+++||+++++++.+++.+.++..+++.||+||++.
T Consensus 315 ------------------------~~~~~~~~~--------~lr~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 362 (563)
T PRK06710 315 ------------------------PLLKEYDIS--------SIRACISGSAPLPVEVQEKFETVTGGKLVEGYGLTESSP 362 (563)
T ss_pred ------------------------CccccCChh--------hhhheeeCCCcCCHHHHHHHHHhhCCCEecccccccCcc
Confidence 111122222 789999999999999999999988999999999999987
Q ss_pred ceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 423 GCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 423 ~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
++..........++++|+|++++.++|+|.+++..++.+ +.|||+++|+.++.||+++++.+...+.+|||+|||.
T Consensus 363 ~~~~~~~~~~~~~~~~G~~~~~~~~~i~~~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGD~ 438 (563)
T PRK06710 363 VTHSNFLWEKRVPGSIGVPWPDTEAMIMSLETGEALPPG--EIGEIVVKGPQIMKGYWNKPEETAAVLQDGWLHTGDV 438 (563)
T ss_pred ccccCcccccccCCccCCCCCCCeEEEEECCCCccCCCC--CceEEEEecCccchhhhCChHHHhhhcccCcccccce
Confidence 654433323334578999999999999984555555555 8999999999999999999999988888999999995
No 78
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=5e-47 Score=395.70 Aligned_cols=401 Identities=23% Similarity=0.352 Sum_probs=306.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
.+.++.+.|+++++.+|+++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++
T Consensus 19 ~~~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 89 (541)
T TIGR03205 19 ARGTLPDLLSKAAADYGPRPALEFR---D------RPITYTELEAMAETAAAALLRAGYGKDASVALYLGNTPDHPINFF 89 (541)
T ss_pred CCCCHHHHHHHHHHHcCCCceEEEC---C------cEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCChHHHHHHH
Confidence 4568999999999999999999864 3 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC--hhhhhhcCccCCCCccEEEEecCCChhh--HHHh-hhcC
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK--IPSILSCLPRCCLYLKTIVSFANVSSSQ--KKEA-EELG 195 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~~-~~~~ 195 (501)
||+++|++++|++|..+.+++.++++.++++.+|+++.. .....+.... ..+..++.+....... .... ....
T Consensus 90 a~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (541)
T TIGR03205 90 GALKAGARVVHLSPLDGERALSHKLSDSGARLLITSDLAALLPMALKFLEK--GLLDRLIVCEDDNWGKVGTPQAPIPAD 167 (541)
T ss_pred HHHhcCeEEEecCCCCCHHHHHHHHhhcCceEEEEeCchhhhHHHHHhhhc--ccceEEEEecccccccccccccccCCC
Confidence 999999999999999999999999999999999998632 1111111111 1123333332211000 0000 0001
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeee-ccccCCCCcEEEEecC
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV-TGKVCSEEDTYFSFLP 274 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~-~~~~~~~~d~~l~~~p 274 (501)
.....++++++............++++++++|||||||.||+|+++|.++....... ..+.. ........+++++..|
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p 246 (541)
T TIGR03205 168 PRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIY-DVWGKPSRATRGDVERVICVLP 246 (541)
T ss_pred cccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHH-HhhcccccccCCCCceEEEecc
Confidence 123456666554322222334567889999999999999999999999987654421 11100 0012234578999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (501)
++|.+++.. ++.++..|+++++... ++..+++.|+++++|++.++|.++..+++.
T Consensus 247 ~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~----------------------- 303 (541)
T TIGR03205 247 LFHIYALTVILLRSLRRGDLISLHQRFDVAAVFRDIEEKRATVFPGVPTMWIALAND----------------------- 303 (541)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEecCCCCHHHHHHHHHHcCCeEeechHHHHHHHHhC-----------------------
Confidence 999998875 7788999999888765 999999999999999999999999887641
Q ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCC
Q 010774 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVF 432 (501)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~ 432 (501)
+...+.++ +++|.+++||+++++++.+++.+.++..+++.||+||++.+++.......
T Consensus 304 --------------~~~~~~~~--------~~l~~i~~gg~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~ 361 (541)
T TIGR03205 304 --------------PSLEKRDL--------SSLATIGSGGAPLPVEVANFFERKTGLKLKSGWGMTETCSPGTGHPPEGP 361 (541)
T ss_pred --------------ccccccCc--------cccceEEEccccCCHHHHHHHHHHhCCCeecccccccCCcccccCCCCCC
Confidence 11111122 27999999999999999999998889999999999999887665443333
Q ss_pred cccCcccccccCeEEEEeec-CCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 433 NMIGTVGVPMTTVEARLESV-PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 433 ~~~~s~G~p~p~~~i~I~d~-~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
..++++|+|++++.++|++. +++.+++.+ +.|||+++|++++.||+++++.+.+.|.++||+|||.
T Consensus 362 ~~~~~~G~~~~~~~~~v~~~d~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~TGD~ 428 (541)
T TIGR03205 362 DKPGSIGLMLPGIELDVVSLDDPTKVLPPG--EVGELRIRGPNVTRGYWNRPEESAEAFVGDRFLTGDI 428 (541)
T ss_pred CCCCCcceeccCceeEEEecCCCCccCCCC--CeeEEEEecCCccccccCChhhhHhhhccCCcccCce
Confidence 44578999999999988642 445555544 8999999999999999999999998888999999995
No 79
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=3.8e-48 Score=472.75 Aligned_cols=369 Identities=20% Similarity=0.226 Sum_probs=309.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|.++++++|+++|+++. + +++||+||.++++++|+.|.+.|+++|++|+|+++|++++++++||
T Consensus 3094 ~~~~~~l~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~vv~~la 3164 (3956)
T PRK12467 3094 ERLVHQLIEAQVARTPEAPALVFG---D------QQLSYAELNRRANRLAHRLIAIGVGPDVLVGVAVERSVEMIVALLA 3164 (3956)
T ss_pred cccHHHHHHHHHHhCCCcceEeeC---C------cccCHHHHHHHHHHHHHHHHHcCCCCCCeEEEEeCCCHHHHHHHHH
Confidence 468999999999999999999986 4 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.++++++|++......+.... ...++.++...
T Consensus 3165 vl~aGa~~vpld~~~p~~rl~~il~~~~~~~vlt~~~~~~~~~~~~------~~~~~~~~~~~----------------- 3221 (3956)
T PRK12467 3165 VLKAGGAYVPLDPEYPRERLAYMIEDSGVKLLLTQAHLLEQLPAPA------GDTALTLDRLD----------------- 3221 (3956)
T ss_pred HHhhCcEeecCCCCChHHHHHHHHhCCCCcEEEechhhhhhccccc------CCceeeecchh-----------------
Confidence 9999999999999999999999999999999999876544332110 01112221110
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
........+.....++++++|+|||||||.||||+++|+++.+.+.+....+ .+..+|++++..|++|..+.
T Consensus 3222 ---~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 3293 (3956)
T PRK12467 3222 ---LNGYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAY-----ELDANDRVLLFMSFSFDGAQ 3293 (3956)
T ss_pred ---hcccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhc-----CCCcCCEEEEecCccHhHHH
Confidence 0011111222345678999999999999999999999999999999887776 78899999999999999998
Q ss_pred HHHHHHHhcCcEEEEecC---CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 282 IIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
..++.+|+.|+++++.+. ++..+++.|+++++|++.++|++++.+++...
T Consensus 3294 ~~~~~~L~~G~~l~i~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~--------------------------- 3346 (3956)
T PRK12467 3294 ERFLWTLICGGCLVVRDNDLWDPEELWQAIHAHRISIACFPPAYLQQFAEDAG--------------------------- 3346 (3956)
T ss_pred HHHHHHHhCCCEEEECCcccCCHHHHHHHHHHcCCEEEEcCHHHHHHHHhccc---------------------------
Confidence 889999999999999864 88999999999999999999999998865210
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCC----c
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVF----N 433 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~----~ 433 (501)
..++ ++||.+++|||++++++.++|.+.+ ++.++|.||+||+++.++....... .
T Consensus 3347 ------------~~~~--------~~lr~~~~gGe~~~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 3406 (3956)
T PRK12467 3347 ------------GADC--------ASLDIYVFGGEAVPPAAFEQVKRKLKPRGLTNGYGPTEAVVTVTLWKCGGDAVCEA 3406 (3956)
T ss_pred ------------ccCC--------CCceEEEEecCCCCHHHHHHHHHhCCCCEEEeCcccchhEeeeEEEecccccccCC
Confidence 0011 3799999999999999999998877 6789999999999987765433221 2
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccC-------cccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDG-------WFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dg-------w~~TGD~ 500 (501)
...++|+|++|++++|+| ++++++|.| ++|||+|+|+++++||+|+|+.|++.| .|+ ||+|||-
T Consensus 3407 ~~~~iG~p~~~~~~~v~d-~~~~~vp~G--~~GEL~i~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl 3478 (3956)
T PRK12467 3407 PYAPIGRPVAGRSIYVLD-GQLNPVPVG--VAGELYIGGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDL 3478 (3956)
T ss_pred CCCCCccccCCCEEEEEC-CCCCCCCCC--CCceEEEcchhhhhhccCCcccchhhccCCCCCCCCceeeccchh
Confidence 236899999999999999 889888876 999999999999999999999999998 444 6999995
No 80
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=9.8e-48 Score=439.68 Aligned_cols=371 Identities=20% Similarity=0.261 Sum_probs=307.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.++++.+|+++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++||
T Consensus 457 ~~~l~~~~~~~~~~~p~~~Al~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~g~~V~l~~~~~~~~i~~~la 527 (1296)
T PRK10252 457 ETTLSALVAQQAAKTPDAPALADA---R------YQFSYREMREQVVALANLLRERGVKPGDSVAVALPRSVFLTLALHA 527 (1296)
T ss_pred cCCHHHHHHHHHHhCCCCeEEEcC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 368999999999999999999875 3 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.+++++++++.+....+... ... .+.. +
T Consensus 528 ~~~~G~~~vpld~~~p~~~~~~~l~~~~~~~~i~~~~~~~~~~~~-----~~~-~~~~---------------------~ 580 (1296)
T PRK10252 528 IVEAGAAWLPLDTGYPDDRLKMMLEDARPSLLITTADQLPRFADV-----PDL-TSLC---------------------Y 580 (1296)
T ss_pred HHHhCCEEEecCccCHHHHHHHHHHhCCCCEEEECcchhhhcccC-----CCc-eeee---------------------c
Confidence 999999999999999999999999999999999988655433211 000 1111 1
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.+..... .........++++++|+|||||||.||||+++|+++++.+.++...+ ++..+|++++..|++|..++
T Consensus 581 ~~~~~~~-~~~~~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 654 (1296)
T PRK10252 581 NAPLAPQ-GAAPLQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHY-----PLTADDVVLQKTPCSFDVSV 654 (1296)
T ss_pred ccccccc-cCCCCCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhc-----CCCCCCEEEEeCCcchhhhH
Confidence 1111000 01111223568899999999999999999999999999998877776 78899999999999999998
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+|+.|+++++.+. ++..+++.++++++|++.++|++++.+++......
T Consensus 655 ~~~~~~l~~G~~l~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~----------------------- 711 (1296)
T PRK10252 655 WEFFWPFIAGAKLVMAEPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEG----------------------- 711 (1296)
T ss_pred HHHHHHHhCCCEEEECChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccc-----------------------
Confidence 888999999999999763 88999999999999999999999998875321100
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC------
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV------ 431 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~------ 431 (501)
....+ +++|.+++||+++++++.+.|.+.++++++|.||+||++.+++......
T Consensus 712 ------------~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 771 (1296)
T PRK10252 712 ------------ARQSC--------ASLRQVFCSGEALPADLCREWQQLTGAPLHNLYGPTEAAVDVSWYPAFGEELAAV 771 (1296)
T ss_pred ------------ccccC--------CCccEEEEecCCCCHHHHHHHHhcCCCEEEeCCCcchhhheeeeeeccccccccc
Confidence 00001 3799999999999999999999988999999999999988766543322
Q ss_pred CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-cc------CcccCCCC
Q 010774 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD------GWFHTEVH 500 (501)
Q Consensus 432 ~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~d------gw~~TGD~ 500 (501)
.....++|+|++|++++|+| ++++.++.| +.|||+|+|++++.||+++++.|++.| .+ +||+|||.
T Consensus 772 ~~~~~~iG~p~~~~~~~i~d-~~~~~~~~g--~~Gel~i~g~~~~~GY~~~~~~t~~~f~~~~~~~~~~~y~TGDl 844 (1296)
T PRK10252 772 RGSSVPIGYPVWNTGLRILD-ARMRPVPPG--VAGDLYLTGIQLAQGYLGRPDLTASRFIADPFAPGERMYRTGDV 844 (1296)
T ss_pred CCCCCCcccccCCCEEEEEC-CCCCCCCCC--CceEEEecccccchhhCCCcccchhhcccCCCCCCCEEEecCce
Confidence 12346799999999999999 888888776 899999999999999999999999988 32 49999995
No 81
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.6e-47 Score=394.76 Aligned_cols=396 Identities=20% Similarity=0.261 Sum_probs=309.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+++.++.++|+++++++|++++++.. .. +..+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 7 ~~~~~~~~~~~~~a~~~~~~~~~~~~---~~--~~~~~~Ty~el~~~v~~la~~L~~~g~~~gd~v~i~~~~~~~~~~~~ 81 (542)
T PRK06018 7 DWPLLCHRIIDHAARIHGNREVVTRS---VE--GPIVRTTYAQIHDRALKVSQALDRDGIKLGDRVATIAWNTWRHLEAW 81 (542)
T ss_pred cCCCCHHHHHHHHHHhCCCceEEEee---cc--CCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchHHHHHH
Confidence 66789999999999999999999853 11 23468999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
+||+++|++++|++|.++.+++..+++.++++.++++.+..+.+.+.... ......++.+.+..... ........
T Consensus 82 la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~~~~ 156 (542)
T PRK06018 82 YGIMGIGAICHTVNPRLFPEQIAWIINHAEDRVVITDLTFVPILEKIADK-LPSVERYVVLTDAAHMP----QTTLKNAV 156 (542)
T ss_pred HHHHhcCeEeeccccccCHHHHHHHHhccCCCEEEEccccHHHHHHHHhh-CCCccEEEEeccccccc----ccCccccc
Confidence 99999999999999999999999999999999999998876665443222 23344555443321100 00111233
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHH-HHH-hhcceeeeeccccCCCCcEEEEecChHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIV-AEV-LSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~-~~~-~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
.+++++..............+++++++|||||||.||+|.+||.+.+ ... ......+ ++..+|+++...|++|
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~p~~h 231 (542)
T PRK06018 157 AYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDAL-----GTSAADTMLPVVPLFH 231 (542)
T ss_pred cHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhc-----CCCCCCEEEEecCHHH
Confidence 55666544322222234466789999999999999999999999743 222 2222233 6778899999999999
Q ss_pred HHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 278 IYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 278 ~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
.+++...+.++..|+++++... ++..+++.++++++|.++++|++++.+++.....
T Consensus 232 ~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~---------------------- 289 (542)
T PRK06018 232 ANSWGIAFSAPSMGTKLVMPGAKLDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKE---------------------- 289 (542)
T ss_pred HhhhHHHHhhhhcCceEEccCcCCCHHHHHHHHHhcCCceeecCcHHHHHHHhccccc----------------------
Confidence 9998877788999999988653 8899999999999999999999999987632111
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC----
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV---- 431 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~---- 431 (501)
..++ +++|.+++||+++++++.++|++ +++.+++.||+||++.+++......
T Consensus 290 ---------------~~~~--------~~lr~~~~~G~~l~~~~~~~~~~-~~~~~~~~YG~tE~~~~~~~~~~~~~~~~ 345 (542)
T PRK06018 290 ---------------GLKL--------PHLKMVVCGGSAMPRSMIKAFED-MGVEVRHAWGMTEMSPLGTLAALKPPFSK 345 (542)
T ss_pred ---------------CCCc--------ccceEEEEcCCCCCHHHHHHHHH-hCCCeEeeecccccCcccccccCcccccc
Confidence 0111 37999999999999999999999 8999999999999987765432111
Q ss_pred ------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 432 ------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 432 ------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.....++|+|.+|++++|+| +++.+++.+.+..|||+++|++++.|||++. ...+ .+|||+|||.
T Consensus 346 ~~~~~~~~~~~~~G~~~~g~~i~v~d-~~~~~~~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~~~~~~~~TGDl 417 (542)
T PRK06018 346 LPGDARLDVLQKQGYPPFGVEMKITD-DAGKELPWDGKTFGRLKVRGPAVAAAYYRVD---GEILDDDGFFDTGDV 417 (542)
T ss_pred CCchhhhhccccCCCCCCCcEEEEEC-CCCCCCCCCCCceeEEEEecCCcchhhhcCc---ccEecCCcEEEcCCE
Confidence 01235789999999999999 8888887755568999999999999999842 2223 5899999995
No 82
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.1e-47 Score=395.79 Aligned_cols=392 Identities=18% Similarity=0.215 Sum_probs=302.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+...++.++|.+.++.+|+++|++.. . +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 7 ~~~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~~L~~~~~~~a~~L~~~g~~~g~~V~i~~~n~~~~~~~~ 77 (540)
T PRK06164 7 PRADTLASLLDAHARARPDAVALIDE----D-----RPLSRAELRALVDRLAAWLAAQGVRRGDRVAVWLPNCIEWVVLF 77 (540)
T ss_pred cCCCCHHHHHHHHHHhCCCCeEEecC----C-----CcccHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcHHHHHHH
Confidence 34468999999999999999999853 2 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh-----hhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP-----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
+||+++|++++|+++..+.+++.++++.++++++|++.+... .+..........++.++.++.......
T Consensus 78 la~~~~G~~~v~l~~~~~~~~l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 151 (540)
T PRK06164 78 LACARLGATVIAVNTRYRSHEVAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDAADATP------ 151 (540)
T ss_pred HHHHHhCcEEEecCCCCCcHHHHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccCcccCC------
Confidence 999999999999999999999999999999999999876421 111111111223444544431110000
Q ss_pred CceEeeHHHHHhcC-CC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEE
Q 010774 195 GVSCFSWEEFLQLG-TL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYF 270 (501)
Q Consensus 195 ~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l 270 (501)
......+.++.... .. .........+++++++|||||||.||+|.++|.++...+..+...+ .+..+++++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~-----~~~~~~~~l 226 (540)
T PRK06164 152 APAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAY-----GYDPGAVLL 226 (540)
T ss_pred CCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEE
Confidence 00000011111100 00 0011223467899999999999999999999999999888776666 677899999
Q ss_pred EecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHH
Q 010774 271 SFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (501)
Q Consensus 271 ~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (501)
+.+|++|.+|+..++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+++..
T Consensus 227 ~~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~------------------- 287 (540)
T PRK06164 227 AALPFCGVFGFSTLLGALAGGAPLVCEPVFDAARTARALRRHRVTHTFGNDEMLRRILDTA------------------- 287 (540)
T ss_pred EcCCchhHHHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-------------------
Confidence 99999999999888999999999998775 8999999999999999999999999987630
Q ss_pred HHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEec-CCCCHHHHHHHHHhhCCCeeeeecccccCcceeccc
Q 010774 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA-APLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSL 428 (501)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG-~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 428 (501)
..+.++ ++++.+.++| ++...++.+++.+. ++.+++.||+||++.+++...
T Consensus 288 -------------------~~~~~~--------~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~ 339 (540)
T PRK06164 288 -------------------GERADF--------PSARLFGFASFAPALGELAALARAR-GVPLTGLYGSSEVQALVALQP 339 (540)
T ss_pred -------------------cccCCC--------cceeeeeeccCCcchHHHHHHHhhc-CCceecceeeccccceeeccC
Confidence 001112 2778777766 55566777777765 899999999999988766544
Q ss_pred CCC--CcccCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 429 ADV--FNMIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 429 ~~~--~~~~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.+. .....+.|.|+ ++++++|+|.++++.++.+ +.|||||+|++++.||+++++.+.+.| .+|||+|||.
T Consensus 340 ~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~g--~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~~~~~TGDl 413 (540)
T PRK06164 340 ATDPVSVRIEGGGRPASPEARVRARDPQDGALLPDG--ESGEIEIRAPSLMRGYLDNPDATARALTDDGYFRTGDL 413 (540)
T ss_pred CCCCCcceeccCccccCCCeEEEEecCCCCcCCCCC--CeeEEEEecccccccccCCchhhhhcccCCCceecCCe
Confidence 332 12235678875 8999999994455555544 899999999999999999999999988 7899999994
No 83
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.1e-47 Score=391.61 Aligned_cols=358 Identities=23% Similarity=0.339 Sum_probs=287.3
Q ss_pred HHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEE
Q 010774 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (501)
Q Consensus 50 ~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 129 (501)
+.+++.+|+++|+.+. ..+ +.+||.||.++++++|.+|.+.|+++||+|+++++|++++++++|||+++|+++
T Consensus 2 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~v~~~a~~l~~~g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~ 74 (488)
T PRK09088 2 AFHARLQPQRLAAVDL---ALG----RRWTYAELDALVGRLAAVLRRRGCVDGERLAVLARNSVWLVALHFACARVGAIY 74 (488)
T ss_pred chhhhhCCCceEEEec---CCC----cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcCeEE
Confidence 4567889999999763 221 589999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcC-
Q 010774 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG- 208 (501)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 208 (501)
+|+++..+.+++.++++.++++++|+++....... .. ..++++....
T Consensus 75 v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~-----------~~---------------------~~~~~~~~~~~ 122 (488)
T PRK09088 75 VPLNWRLSASELDALLQDAEPRLLLGDDAVAAGRT-----------DV---------------------EDLAAFIASAD 122 (488)
T ss_pred EeeCccCCHHHHHHHHHhCCCCEEEEcchhhcccc-----------cc---------------------cchhhhhhhcc
Confidence 99999999999999999999999999765332100 00 0111111110
Q ss_pred -CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHH
Q 010774 209 -TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETH 286 (501)
Q Consensus 209 -~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~ 286 (501)
...........+++++++|||||||.||+|.++|++++.....+...+ ....+|++++.+|++|.+++.. ++.
T Consensus 123 ~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~g~~~~~~~ 197 (488)
T PRK09088 123 ALEPADTPSIPPERVSLILFTSGTSGQPKGVMLSERNLQQTAHNFGVLG-----RVDAHSSFLCDAPMFHIIGLITSVRP 197 (488)
T ss_pred ccccccCCCCCCCCceEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEecchHHHHHHHHHHHH
Confidence 001111233467899999999999999999999999988777665444 5678999999999999999886 677
Q ss_pred HHhcCcEEEEecC-CHHHHHHHHh--hhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCC
Q 010774 287 CIHKGCSIGFWRG-DVRYLMEDIQ--ELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (501)
Q Consensus 287 ~l~~G~~~~~~~~-~~~~~~~~i~--~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (501)
++..|+++++.+. ++..++..+. ++++|+++++|++++.+.+.
T Consensus 198 ~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~P~~~~~l~~~---------------------------------- 243 (488)
T PRK09088 198 VLAVGGSILVSNGFEPKRTLGRLGDPALGITHYFCVPQMAQAFRAQ---------------------------------- 243 (488)
T ss_pred HHhcCCEEEEcCCCCHHHHHHHHHhhccCCcEEeeHHHHHHHHHhC----------------------------------
Confidence 8999999988765 7888888886 48899999999999887641
Q ss_pred CcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC--CCcccCccccc
Q 010774 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD--VFNMIGTVGVP 441 (501)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~--~~~~~~s~G~p 441 (501)
+.....++ +++|.+++||++++....+.+.+. |+++++.||+||++.+....... ....++++|+|
T Consensus 244 ---~~~~~~~~--------~~l~~~~~gG~~~~~~~~~~~~~~-g~~v~~~YG~TE~~~~~~~~~~~~~~~~~~~~vG~~ 311 (488)
T PRK09088 244 ---PGFDAAAL--------RHLTALFTGGAPHAAEDILGWLDD-GIPMVDGFGMSEAGTVFGMSVDCDVIRAKAGAAGIP 311 (488)
T ss_pred ---cCcCcccc--------ccceEEEecCCCCCHHHHHHHHHh-CCceeeeecccccccccccCCCcccccccCCccccC
Confidence 11111112 279999999999999988888765 89999999999998764332211 12345889999
Q ss_pred ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 442 ~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
+|+++++|+| +++..++.+ +.|||+|+|++++.||+++++.+++.+ .+|||+|||-
T Consensus 312 ~~~~~~~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gY~~~~~~~~~~~~~~g~~~TGDl 368 (488)
T PRK09088 312 TPTVQTRVVD-DQGNDCPAG--VPGELLLRGPNLSPGYWRRPQATARAFTGDGWFRTGDI 368 (488)
T ss_pred CCCcEEEEEC-CCCCCCcCC--CceEEEEECCccchhhcCChhhhhhhhcCCCCeeecce
Confidence 9999999999 888777655 899999999999999999999988877 6899999994
No 84
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.6e-47 Score=395.81 Aligned_cols=402 Identities=21% Similarity=0.309 Sum_probs=305.2
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH
Q 010774 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (501)
Q Consensus 37 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 116 (501)
..+....++.+.|+++++.+|+++|+.+. + +.+||.||.++++++|++|.+.|+++||+|+++++|+++++
T Consensus 27 ~~~~~~~~l~~~l~~~a~~~p~~~al~~~---~------~~~Ty~~l~~~~~~la~~L~~~g~~~g~~V~i~~~n~~~~~ 97 (567)
T PRK06178 27 EYPHGERPLTEYLRAWARERPQRPAIIFY---G------HVITYAELDELSDRFAALLRQRGVGAGDRVAVFLPNCPQFH 97 (567)
T ss_pred CCCcCcccHHHHHHHHHHHCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCcHHH
Confidence 34455578999999999999999999875 3 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhH-HHhh---
Q 010774 117 IAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-KEAE--- 192 (501)
Q Consensus 117 ~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~--- 192 (501)
++++||+++|++++|++|..+..++.++++.++++++++++...+.+.+..... ....++.......... ....
T Consensus 98 ~~~lA~~~~G~~~v~l~p~~~~~~~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~ 175 (567)
T PRK06178 98 IVFFGILKLGAVHVPVSPLFREHELSYELNDAGAEVLLALDQLAPVVEQVRAET--SLRHVIVTSLADVLPAEPTLPLPD 175 (567)
T ss_pred HHHHHHHHhCeEEeecCCCCCHHHHHHHHHhcCCcEEEEccchHHHHHHhhccC--CcceEEEecccccccccccccccc
Confidence 999999999999999999999999999999999999999988776654433221 2333333221110000 0000
Q ss_pred ------hcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCC
Q 010774 193 ------ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE 266 (501)
Q Consensus 193 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~ 266 (501)
.....+..+.+................+++++|+|||||||.||+|.+||.+++.......... .....+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~----~~~~~~ 251 (567)
T PRK06178 176 SLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVA----VVGGED 251 (567)
T ss_pred ccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHh----ccCCCC
Confidence 0000111121111111111122334578999999999999999999999999987665432211 256788
Q ss_pred cEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHH
Q 010774 267 DTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (501)
Q Consensus 267 d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (501)
|++++.+|++|.+|+.. ++.+++.|+++++.+. ++..+++.++++++|.+.++|..+..+++.
T Consensus 252 d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~--------------- 316 (567)
T PRK06178 252 SVFLSFLPEFWIAGENFGLLFPLFSGATLVLLARWDAVAFMAAVERYRVTRTVMLVDNAVELMDH--------------- 316 (567)
T ss_pred cEEEEecchHHHHHHHHHHHHHHHcCceEEEeCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhC---------------
Confidence 99999999999999874 7788999999999875 999999999999999999999998877641
Q ss_pred HHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEE--EecCCCCHHHHHHHHHhhCCCeee-eecccccC
Q 010774 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAML--SGAAPLPIHVEEFLRVTSGAPLTQ-GYGLTESC 421 (501)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~--~gG~~~~~~~~~~~~~~~~~~l~~-~yG~tE~~ 421 (501)
+...+.+++ +++.+. ..++.+++++.+.|++.+|..++. .||+||++
T Consensus 317 ----------------------~~~~~~~l~--------~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~YG~tE~~ 366 (567)
T PRK06178 317 ----------------------PRFAEYDLS--------SLRQVRVVSFVKKLNPDYRQRWRALTGSVLAEAAWGMTETH 366 (567)
T ss_pred ----------------------CCCCCCCcc--------hheeeeeccccccCCHHHHHHHHHHhCCccccccccccccc
Confidence 111112222 455543 446899999999999988877664 79999998
Q ss_pred cceecccCC------CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcc
Q 010774 422 SGCFTSLAD------VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWF 495 (501)
Q Consensus 422 ~~~~~~~~~------~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~ 495 (501)
..+...... ....++++|+|+||++++|+|.+++..++.+ ++|||+|+|++++.||+++++.++..+.||||
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~v~d~~~~~~~~~g--~~Gel~v~g~~v~~gY~~~~~~~~~~~~dg~~ 444 (567)
T PRK06178 367 TCDTFTAGFQDDDFDLLSQPVFVGLPVPGTEFKICDFETGELLPLG--AEGEIVVRTPSLLKGYWNKPEATAEALRDGWL 444 (567)
T ss_pred ccceeccccccCccccccCCcccccccCCcEEEEEcCCCCCcCCCC--CceEEEEECCcccccccCChhhhhhcccCCce
Confidence 765443211 1223578999999999999994456666655 89999999999999999999999888889999
Q ss_pred cCCCC
Q 010774 496 HTEVH 500 (501)
Q Consensus 496 ~TGD~ 500 (501)
+|||.
T Consensus 445 ~TGDl 449 (567)
T PRK06178 445 HTGDI 449 (567)
T ss_pred eecce
Confidence 99994
No 85
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=9.1e-48 Score=399.31 Aligned_cols=366 Identities=17% Similarity=0.206 Sum_probs=276.4
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
-+.+.|+++++++|+++|+++. + ++.++++||+||.++++++|++|.++ ++||+|+|+++|++++++++|||+
T Consensus 3 ~~~~~l~~~~~~~~~~~a~~~~---~--~~~~~~~ty~el~~~~~~lA~~L~~~--~~g~~V~l~~~~~~e~~~~~la~~ 75 (525)
T PRK05851 3 ELAAALSDAMTASGRDLVVLDR---E--SGLWRRHPWPEVHGRAENVAARLLDR--DRPGAVGLVGEPTVELVAAIQGAW 75 (525)
T ss_pred hHHHHHHHHhcCCCCceEEeCC---C--CCcceeecHHHHHHHHHHHHHHHHhc--CCCCeEEEEcCCCHHHHHHHHHHH
Confidence 3889999999999999999864 3 23467999999999999999999988 799999999999999999999999
Q ss_pred hcCCEEEEecCC--------CCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 124 SQAITYVPLYDT--------LGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 124 ~~G~~~v~l~~~--------~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
++|++++ ++|. ...+++..+++.++++++|++......+..... . +.+.+
T Consensus 76 ~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~----~----~~~~~------------- 133 (525)
T PRK05851 76 LAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVDS----S----VTVHD------------- 133 (525)
T ss_pred HcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhhc----c----ccccc-------------
Confidence 9999865 3332 223455677899999999998765544322110 0 00000
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC-CCcEEEEecC
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS-EEDTYFSFLP 274 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~-~~d~~l~~~p 274 (501)
+....... .........++++++|+|||||||.||||+++|.++++.+..+...+ .+. .+|++++.+|
T Consensus 134 -----~~~~~~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~d~~l~~~p 202 (525)
T PRK05851 134 -----LATAAHTN-RSASLTPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARV-----GLDAATDVGCSWLP 202 (525)
T ss_pred -----cccccccc-ccccCCCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHh-----CCCCCCCeEEEcCC
Confidence 00000000 01111223568999999999999999999999999999888776655 666 8899999999
Q ss_pred hHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHH
Q 010774 275 LAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (501)
Q Consensus 275 l~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (501)
++|.+++..++.+++.|+++++.+. ++..+++.++++++|++..+|.++..+.+.. .
T Consensus 203 l~h~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~-~----------------- 264 (525)
T PRK05851 203 LYHDMGLAFLLTAALAGAPLWLAPTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYA-R----------------- 264 (525)
T ss_pred CccCccHHHHHHHHHcCCeEEEcCHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhh-c-----------------
Confidence 9999999888899999999998762 6778999999999998755444444332210 0
Q ss_pred HHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh---hCC---CeeeeecccccCcc
Q 010774 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGLTESCSG 423 (501)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~---~~~---~l~~~yG~tE~~~~ 423 (501)
.....+++ ++|.+++||+++++++.++|.+. +|. .+++.||+||++.+
T Consensus 265 ------------------~~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~ 318 (525)
T PRK05851 265 ------------------RVSDVDLG--------ALRVALNGGEPVDCDGFERFATAMAPFGFDAGAAAPSYGLAESTCA 318 (525)
T ss_pred ------------------cccCCCHH--------HhheeEeccccCCHHHHHHHHHHHhhcCCChhhcccccchhhhceE
Confidence 01111222 78999999999999999998874 354 49999999999876
Q ss_pred eecccCC--------------CCcccCcccccccCeEEEEeecCCCC-ccCCCCCCCceEEEecCCccccccCCcccchh
Q 010774 424 CFTSLAD--------------VFNMIGTVGVPMTTVEARLESVPEMG-YDALSSVPRGEICLRGNTLFSGYYKRPDLTEE 488 (501)
Q Consensus 424 ~~~~~~~--------------~~~~~~s~G~p~p~~~i~I~d~~~~~-~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~ 488 (501)
++..... .....+++|+|+||++++|+| +++. +++.+ +.|||+|+|++++.|||++++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d-~~~~~~~~~g--~~GEl~v~g~~~~~GY~~~~~~~-- 393 (525)
T PRK05851 319 VTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISP-GDGAAGVAGR--EIGEIEIRGASMMSGYLGQAPID-- 393 (525)
T ss_pred EEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEEC-CCCCccCCCC--CeEEEEEecCchhhccccCCccC--
Confidence 6543221 012346899999999999999 6664 34544 89999999999999999998653
Q ss_pred hhccCcccCCCC
Q 010774 489 VIVDGWFHTEVH 500 (501)
Q Consensus 489 ~~~dgw~~TGD~ 500 (501)
.+|||+|||.
T Consensus 394 --~~~~~~TGDl 403 (525)
T PRK05851 394 --PDDWFPTGDL 403 (525)
T ss_pred --CCCceeccce
Confidence 3799999995
No 86
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=7.9e-47 Score=395.98 Aligned_cols=399 Identities=22% Similarity=0.320 Sum_probs=299.6
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|.+.+..+|+++|+++. . +.+||+||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 20 ~~~~~~~~~~~~~~p~~~a~~~~---~------~~~ty~eL~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~la~ 90 (567)
T PLN02479 20 LTPLWFLERAAVVHPTRKSVVHG---S------VRYTWAQTYQRCRRLASALAKRSIGPGSTVAVIAPNIPAMYEAHFGV 90 (567)
T ss_pred cCHHHHHHHHHhhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHHH
Confidence 46889999999999999999864 2 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc------CCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR------CCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
+++|++++|+++..+.+++.++++.++++.+|+++...+........ .......++.+................
T Consensus 91 ~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (567)
T PLN02479 91 PMAGAVVNCVNIRLNAPTIAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPKSLQYALGK 170 (567)
T ss_pred HhCCcEEEEeccccCHHHHHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcccccccccc
Confidence 99999999999999999999999999999999988765443221110 001122344443221100000000111
Q ss_pred eEeeHHHHHhcCCCCCC-CCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh
Q 010774 197 SCFSWEEFLQLGTLDCE-LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (501)
....+++++........ ....+.+++++++|||||||.||+|.+||.+++.........+ .+..++++++.+|+
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~ 245 (567)
T PLN02479 171 GAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIW-----GMNEGAVYLWTLPM 245 (567)
T ss_pred CcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhc-----CCCCCCEEEEecch
Confidence 23346666544311111 1122334677899999999999999999999876665544443 66788999999999
Q ss_pred HHHHHHHHHH-HHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 276 AHIYDQIIET-HCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 276 ~~~~g~~~~~-~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
+|..++...+ ..++.|.++++...++..+++.++++++|+++++|.++..+++.....
T Consensus 246 ~h~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------- 304 (567)
T PLN02479 246 FHCNGWCFTWTLAALCGTNICLRQVTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSE--------------------- 304 (567)
T ss_pred hhhhhHHHHHHHHhhcCceEeccCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhc---------------------
Confidence 9999977543 456777777666669999999999999999999999999887532100
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC----
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD---- 430 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~---- 430 (501)
...++ ++++.++++|+++++.+.++|.+. +.++++.||+||+++.++.....
T Consensus 305 ---------------~~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~-~~~~~~~yG~tE~~~~~~~~~~~~~~~ 360 (567)
T PLN02479 305 ---------------TILPL--------PRVVHVMTAGAAPPPSVLFAMSEK-GFRVTHTYGLSETYGPSTVCAWKPEWD 360 (567)
T ss_pred ---------------ccccc--------cceeEEEEcCCCCCHHHHHHHHhc-CCceecccccccccccccceecccccc
Confidence 00011 378999999999999999999876 88999999999986544322110
Q ss_pred ------CCcccCcccccccCeE-EEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 431 ------VFNMIGTVGVPMTTVE-ARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 431 ------~~~~~~s~G~p~p~~~-i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
......+.|.+.+|++ ++|+|.+++.+++.+.+++|||+++|++++.|||++++.+++.|.+|||+|||.
T Consensus 361 ~~~~~~~~~~~~~~g~~~~g~~~~~i~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~~g~~~TGDl 437 (567)
T PLN02479 361 SLPPEEQARLNARQGVRYIGLEGLDVVDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFANGWFHSGDL 437 (567)
T ss_pred ccCcccccccccccCCCcCCcCceeEEcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhcCCceeccee
Confidence 0111246788888886 889884455656554446899999999999999999999999999999999995
No 87
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-46 Score=390.61 Aligned_cols=368 Identities=20% Similarity=0.227 Sum_probs=291.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.+.|.++++.+|+++|+++. + +.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|
T Consensus 33 ~~~~~~~~~~~~a~~~p~~~a~~~~---~------~~lTy~el~~~~~~la~~L~~~gi~~g~~V~i~~~~~~~~~~~~l 103 (516)
T PRK13383 33 GGTNPYTLLAVTAARWPGRTAIIDD---D------GALSYRELQRATESLARRLTRDGVAPGRAVGVMCRNGRGFVTAVF 103 (516)
T ss_pred cCCcHHHHHHHHHHHCCCCcEEEeC---C------CcEeHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 3578999999999999999999864 3 379999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|+++.++.+++.++++.++++.+++++.....+.... ..++.++....
T Consensus 104 a~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~-------~~~~~~~~~~~--------------- 161 (516)
T PRK13383 104 AVGLLGADVVPISTEFRSDALAAALRAHHISTVVADNEFAERIAGAD-------DAVAVIDPATA--------------- 161 (516)
T ss_pred HHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEEEEchhHHHHHHhhh-------cceEEeccchh---------------
Confidence 99999999999999999999999999999999999887655442211 11222211100
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHH--hhcceeeeeccccCCCCcEEEEecChHHH
Q 010774 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEV--LSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~--~~~~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
.. . . ....+...++.++|+|||||||.||+|.++|....... ......+ .+..+|+++..+|++|.
T Consensus 162 --~~-~-~---~~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~-----~~~~~d~~~~~~pl~h~ 229 (516)
T PRK13383 162 --GA-E-E---SGGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRT-----RLRTGSRISVAMPMFHG 229 (516)
T ss_pred --hh-h-c---CCCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhh-----ccCCCCeEEEecCCcch
Confidence 00 0 0 00111223556799999999999999999997432111 1111222 67789999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 279 YDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
+++...+.++..|+++++... ++..+++.++++++|.+.++|.++..+.+.....
T Consensus 230 ~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~------------------------ 285 (516)
T PRK13383 230 LGLGMLMLTIALGGTVLTHRHFDAEAALAQASLHRADAFTAVPVVLARILELPPRV------------------------ 285 (516)
T ss_pred hhHHHHHHHHhcCCEEEECCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHhccccc------------------------
Confidence 999888889999999987764 9999999999999999999999998886521100
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s 437 (501)
....++ +++|.+++||+++++++.++|.+.++..+++.||+||++..+...........++
T Consensus 286 -----------~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~ 346 (516)
T PRK13383 286 -----------RARNPL--------PQLRVVMSSGDRLDPTLGQRFMDTYGDILYNGYGSTEVGIGALATPADLRDAPET 346 (516)
T ss_pred -----------cccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCchhhhcccccccccceeccccccccCCCc
Confidence 000011 3799999999999999999999999999999999999987665444333344589
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+|+|+++++|+| +++.+++.+ +.|||+|+|+.++.||++++. ..+.||||+|||.
T Consensus 347 ~G~~~~~~~~~i~d-~~~~~~~~g--~~Gel~v~g~~~~~~Y~~~~~---~~~~~g~~~TGDl 403 (516)
T PRK13383 347 VGKPVAGCPVRILD-RNNRPVGPR--VTGRIFVGGELAGTRYTDGGG---KAVVDGMTSTGDM 403 (516)
T ss_pred ccCCCCCcEEEEEC-CCCCCCCCC--CceEEEEecCcccccccCCch---hheecCceeccee
Confidence 99999999999999 888766655 899999999999999998753 3346899999995
No 88
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.1e-46 Score=391.33 Aligned_cols=398 Identities=20% Similarity=0.307 Sum_probs=305.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
+.++.+.|+++++.+|+++|+++. + +.+||.||.++++++|.+|.+ .|+++||+|+++++|++++++++|
T Consensus 22 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~lTy~~l~~~~~~la~~L~~~~g~~~g~~V~i~~~~~~~~~~~~l 92 (560)
T PRK08974 22 YQSLVDMFEQAVARYADQPAFINM----G-----EVMTFRKLEERSRAFAAYLQNGLGLKKGDRVALMMPNLLQYPIALF 92 (560)
T ss_pred cccHHHHHHHHHHhCCCCceEEEC----C-----ccccHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHH
Confidence 567999999999999999999864 2 479999999999999999984 899999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhh--HH---------
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQ--KK--------- 189 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~--------- 189 (501)
||+++|++++|++|..+.+++.++++.++++.++++.+....+.+.... .....++......... ..
T Consensus 93 A~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ii~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (560)
T PRK08974 93 GILRAGMIVVNVNPLYTPRELEHQLNDSGAKAIVIVSNFAHTLEKVVFK--TPVKHVILTRMGDQLSTAKGTLVNFVVKY 170 (560)
T ss_pred HHHHcCcEEeccCccCCHHHHHHHHHhcCceEEEEeccccHHHHHHhhh--cCcceEEEecccccccccccccccchhhh
Confidence 9999999999999999999999999999999999987654443322211 1112222111000000 00
Q ss_pred ----HhhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCC
Q 010774 190 ----EAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCS 264 (501)
Q Consensus 190 ----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~ 264 (501)
..+........+.+...... ..........+++++|+|||||||.||+|.++|.++...+......+.. ....
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~--~~~~ 248 (560)
T PRK08974 171 IKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYGP--LLHP 248 (560)
T ss_pred cccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhcc--ccCC
Confidence 00000011122333332221 1111222457899999999999999999999999998876543322210 0234
Q ss_pred CCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhH
Q 010774 265 EEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALS 341 (501)
Q Consensus 265 ~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~ 341 (501)
.++.++..+|++|.+++.. .+.++..|+++++... ++..+++.++++++|.+.++|.+++.+.+..
T Consensus 249 ~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~----------- 317 (560)
T PRK08974 249 GKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNPRDIPGFVKELKKYPFTAITGVNTLFNALLNNE----------- 317 (560)
T ss_pred CccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCccCHHHHHHHHHhcCcceEcCcHHHHHHHHhCc-----------
Confidence 5678888999999999775 6677889998777643 8889999999999999999999999987521
Q ss_pred HHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccC
Q 010774 342 KKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESC 421 (501)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~ 421 (501)
.....++ +++|.+++||+++++.+.++|++.+|+.+++.||+||++
T Consensus 318 --------------------------~~~~~~~--------~~lr~~~~gg~~~~~~~~~~~~~~~g~~~~~~YG~tE~~ 363 (560)
T PRK08974 318 --------------------------EFQELDF--------SSLKLSVGGGMAVQQAVAERWVKLTGQYLLEGYGLTECS 363 (560)
T ss_pred --------------------------CcccCCc--------cceeEEEecCccCCHHHHHHHHHHhCCcEEeeecccccC
Confidence 1111122 279999999999999999999998899999999999998
Q ss_pred cceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 422 SGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 422 ~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.+++....+.....+++|.|+|+++++|+| +++.+++.+ +.|||+++|+.++.||+++++.+++.|.+|||+|||.
T Consensus 364 ~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~g~~~TGDl 439 (560)
T PRK08974 364 PLVSVNPYDLDYYSGSIGLPVPSTEIKLVD-DDGNEVPPG--EPGELWVKGPQVMLGYWQRPEATDEVIKDGWLATGDI 439 (560)
T ss_pred ceeeccCCCCcccCCccccCcCCCEEEEEC-CCCCCCCCC--CceEEEEecCCcchhhcCChhhhhhhhhcCCcccCCE
Confidence 877665444444458899999999999999 888877766 8999999999999999999999988888999999995
No 89
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=6.3e-47 Score=391.77 Aligned_cols=368 Identities=18% Similarity=0.225 Sum_probs=299.0
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
++.+.|.+.++.+|+++|+.+. + +.+||+||.+++.++|+.|.+.|+++||+|+++++|+.++++++|||+
T Consensus 1 ~~~~~l~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~ 71 (502)
T TIGR01734 1 KLIEAIQAFAETYPQTIAYRYQ---G------QELTYQQLKEQSDRLAAFIQKRILPKKSPIIVYGHMEPHMLVAFLGSI 71 (502)
T ss_pred CHHHHHHHHHHHCCCceEEEcC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCeEEEEeCCCHHHHHHHHHHH
Confidence 5789999999999999999764 3 479999999999999999999999999999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHH
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEE 203 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (501)
++|++++|+++.++.+++..+++..+++.++++.+....... .. ++.+.. .+.
T Consensus 72 ~~G~~~v~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~--------~~-~~~~~~------------------~~~ 124 (502)
T TIGR01734 72 KSGHAYIPVDTSIPSERIEMIIEAAGPELVIHTAELSIDAVG--------TQ-IITLSA------------------LEQ 124 (502)
T ss_pred HhCCEEeCCCCcChHHHHHHHHHhcCCCEEEecccccccccC--------Cc-eEEchH------------------hhh
Confidence 999999999999999999999999999999998765332210 11 111110 111
Q ss_pred HHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH
Q 010774 204 FLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (501)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 283 (501)
+..............+++.++++|||||||.||+|.++|.++...+.+....+ ....+++++...|++|..++..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~ 199 (502)
T TIGR01734 125 AETSGGPVSFDHAVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADF-----PLSEGKQFLNQAPFSFDLSVMD 199 (502)
T ss_pred hhhhcCCccccccCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhC-----CCCCCceEEeecCceechhHHH
Confidence 11111111111234568899999999999999999999999998888765554 7788999999999999998888
Q ss_pred HHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccC
Q 010774 284 ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (501)
Q Consensus 284 ~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (501)
++.++..|+++++.+. ++..+++.+.+++++.+.++|.+++.++...
T Consensus 200 ~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~----------------------------- 250 (502)
T TIGR01734 200 LYPCLASGGTLHCLDKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDP----------------------------- 250 (502)
T ss_pred HHHHHHCCCEEEEcCHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcc-----------------------------
Confidence 8899999999998764 7899999999999999999999998765411
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC----Ccc
Q 010774 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV----FNM 434 (501)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~----~~~ 434 (501)
.....++ ++++.++++|++++++..+++.+.+ ++.+++.||+||+++.++...... ...
T Consensus 251 --------~~~~~~~--------~~l~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~ 314 (502)
T TIGR01734 251 --------NFNQENY--------PHLTHFLFCGEELPVKTAKALLERFPKATIYNTYGPTEATVAVTSVKITQEILDQYP 314 (502)
T ss_pred --------ccccccC--------CcccEEEEcCCcCCHHHHHHHHHHCCCcEEEeCccCCcceEEEEEEEccccccccCC
Confidence 0111111 3789999999999999999999987 789999999999986554332211 223
Q ss_pred cCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh--cc--CcccCCCC
Q 010774 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VD--GWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~--~d--gw~~TGD~ 500 (501)
..++|++.|+++++|+| +++..++.+ +.|||+|+|+.++.||+++++.+.+.| .+ +||+|||.
T Consensus 315 ~~~vg~~~~~~~~~i~~-~~~~~~~~g--~~Gel~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~TGDl 381 (502)
T TIGR01734 315 RLPIGFAKPDMNLFIMD-EEGEPLPEG--EKGEIVIVGPSVSKGYLNNPEKTAEAFFSHEGQPAYRTGDA 381 (502)
T ss_pred ccccccccCCCEEEEEC-CCCCCCCCC--CeeEEEEccccccccccCCcccchHhheeCCCcEEEECCCE
Confidence 36799999999999999 888777765 899999999999999999999988876 23 59999995
No 90
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3.6e-47 Score=468.08 Aligned_cols=386 Identities=21% Similarity=0.251 Sum_probs=303.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.|+.++|+++++.+|+++|+.+. ++..+..+.+||+||.++++++|+.|++.| ++||+|+|+++|++++++++||
T Consensus 8 ~~tl~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~lTy~el~~~~~~lA~~L~~~~-~~gd~V~i~~~~s~~~~~~~la 83 (4334)
T PRK05691 8 PLTLVQALQRRAAQTPDRLALRFL---ADDPGEGVVLSYRDLDLRARTIAAALQARA-SFGDRAVLLFPSGPDYVAAFFG 83 (4334)
T ss_pred CCCHHHHHHHHHHhCCCceEEEEe---cCCCCcceEeeHHHHHHHHHHHHHHHHhcC-CCCCEEEEEcCCCHHHHHHHHH
Confidence 368999999999999999999986 554555679999999999999999998764 9999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCH-----HHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 122 CNSQAITYVPLYDTLGA-----NAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~-----~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
|+++|++++|++|..+. +++.++++.++++++|++....+.+.............++.++....
T Consensus 84 ~l~aG~~~vp~~p~~~~~~~~~~rl~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 152 (4334)
T PRK05691 84 CLYAGVIAVPAYPPESARRHHQERLLSIIADAEPRLLLTVADLRDSLLQMEELAAANAPELLCVDTLDP----------- 152 (4334)
T ss_pred HHHhCceEeccCCcccccccHHHHHHHHHHhCCCCEEEECHHHHHHHHhhhhcccccCceEEEcccccc-----------
Confidence 99999999999997654 46999999999999999987665543322111112233333322110
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC--CCCcEEEEecC
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLP 274 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~~p 274 (501)
............++++++|+|||||||.||||++||+++++....+...+ .+ ..+|++++.+|
T Consensus 153 ----------~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKGV~lsH~~l~~~~~~~~~~~-----~~~~~~~d~~l~~lp 217 (4334)
T PRK05691 153 ----------ALAEAWQEPALQPDDIAFLQYTSGSTALPKGVQVSHGNLVANEQLIRHGF-----GIDLNPDDVIVSWLP 217 (4334)
T ss_pred ----------cccccccCCCCCcCCeEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHh-----CCCCCCCceEEEecc
Confidence 00011112335678999999999999999999999999999887765544 44 78999999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
++|.+|+.. ++.+++.|+++++.+. +|..|++.++++++|+...+|..+..+.+..
T Consensus 218 ~~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~p~~~~~~i~~~~~t~~~~~~~~~~l~~~~~------------------ 279 (4334)
T PRK05691 218 LYHDMGLIGGLLQPIFSGVPCVLMSPAYFLERPLRWLEAISEYGGTISGGPDFAYRLCSERV------------------ 279 (4334)
T ss_pred chhhhHHHHHHHHHHHCCCEEEEeCcHHHhhCHHHHHHHHHHcCCEEecCCchHHHHHHHhc------------------
Confidence 999999885 7889999999998764 7899999999999998777666665543311
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh---C---CCeeeeecccccCc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---G---APLTQGYGLTESCS 422 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~---~---~~l~~~yG~tE~~~ 422 (501)
.....+.++++ ++|.+++|||++++++.++|.+.+ | ..++++||+||++.
T Consensus 280 ----------------~~~~~~~~~l~--------~lr~~~~gge~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~ 335 (4334)
T PRK05691 280 ----------------SESALERLDLS--------RWRVAYSGSEPIRQDSLERFAEKFAACGFDPDSFFASYGLAEATL 335 (4334)
T ss_pred ----------------CHHHhcccccc--------cceEEEECcccCCHHHHHHHHHHhhhcCCCccccccCcchhhhee
Confidence 01122333443 899999999999999999998876 2 25999999999988
Q ss_pred ceecccCCC---------------------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccC
Q 010774 423 GCFTSLADV---------------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYK 481 (501)
Q Consensus 423 ~~~~~~~~~---------------------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~ 481 (501)
+++...... ....+++|+|+||++++|+|.+++..++.| ++|||||+||++++|||+
T Consensus 336 ~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~Ivd~~~~~~~~~g--~~GEl~v~Gp~v~~GY~~ 413 (4334)
T PRK05691 336 FVSGGRRGQGIPALELDAEALARNRAEPGTGSVLMSCGRSQPGHAVLIVDPQSLEVLGDN--RVGEIWASGPSIAHGYWR 413 (4334)
T ss_pred eeecccCCCCCceEeecHhHHhcCCccCCCCCceeccCCccCCCEEEEEcCCCCcCCCCC--CeEEEEecCCccchhhcC
Confidence 776432210 112358999999999999994456666655 899999999999999999
Q ss_pred Ccccchhhh--ccC--cccCCCCC
Q 010774 482 RPDLTEEVI--VDG--WFHTEVHR 501 (501)
Q Consensus 482 ~~~~~~~~~--~dg--w~~TGD~~ 501 (501)
+|+.|++.| .+| ||||||-+
T Consensus 414 ~~~~T~~~f~~~~g~~w~rTGDlg 437 (4334)
T PRK05691 414 NPEASAKTFVEHDGRTWLRTGDLG 437 (4334)
T ss_pred ChhhhHHHhhcCCCCceeecCCeE
Confidence 999999998 345 99999953
No 91
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.8e-46 Score=389.36 Aligned_cols=370 Identities=17% Similarity=0.170 Sum_probs=288.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv-~~gd~V~i~~~n~~~~~~~~lA 121 (501)
.|+.++|..++ .|+++|+++. + ..+||.||.++++++|+.|.+.|+ .+||+|+++++|+++++++++|
T Consensus 3 ~~~~~~l~~~~--~p~~~Al~~~---~------~~lTy~el~~~~~~la~~L~~~g~~~~~~~V~i~~~n~~~~v~~~lA 71 (540)
T PRK13388 3 DTIAQLLRDRA--GDDTIAVRYG---D------RTWTWREVLAEAAARAAALIALADPDRPLHVGVLLGNTPEMLFWLAA 71 (540)
T ss_pred hhHHHHHHhhc--cCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCcHHHHHHHH
Confidence 46888888764 7999999865 3 479999999999999999999999 8999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++..+++.++++++|++.+....+.+.. .... .++.++.. .+
T Consensus 72 ~~~~Ga~~v~l~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~~-~~i~~~~~----------------~~ 131 (540)
T PRK13388 72 AALGGYVLVGLNTTRRGAALAADIRRADCQLLVTDAEHRPLLDGLD---LPGV-RVLDVDTP----------------AY 131 (540)
T ss_pred HHhCCCEEEEecccCChHHHHHHHHhcCCCEEEEChhhhHHHHhhc---ccCc-eEEEccch----------------hh
Confidence 9999999999999999999999999999999999877655443221 1122 22222211 12
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.+++.......+.....++++++++|||||||.||||.++|.++......+...+ ++..+|+++..+|++|.+++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~ 206 (540)
T PRK13388 132 AELVAAAGALTPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERF-----GLTRDDVCYVSMPLFHSNAV 206 (540)
T ss_pred hhhhccccCcCCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHh-----CCCCCCEEEEeeCchhhcch
Confidence 2232211111112234578999999999999999999999999998887766665 77889999999999999988
Q ss_pred HH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccC
Q 010774 282 II-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKG 359 (501)
Q Consensus 282 ~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 359 (501)
.. ++.++..|+++++.+. ++..+++.++++++|++..+|..+..+++..
T Consensus 207 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~----------------------------- 257 (540)
T PRK13388 207 MAGWAPAVASGAAVALPAKFSASGFLDDVRRYGATYFNYVGKPLAYILATP----------------------------- 257 (540)
T ss_pred HHHHHHHHHcCcEEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCC-----------------------------
Confidence 75 5568999999988764 8999999999999999999999998876410
Q ss_pred CCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCccc
Q 010774 360 MPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVG 439 (501)
Q Consensus 360 ~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G 439 (501)
....... .+++. ++ |++++++..+.|.+.+++++++.||+||++.+++... ....+++|
T Consensus 258 --------~~~~~~~--------~~l~~-~~-G~~~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~~~---~~~~~~vG 316 (540)
T PRK13388 258 --------ERPDDAD--------NPLRV-AF-GNEASPRDIAEFSRRFGCQVEDGYGSSEGAVIVVREP---GTPPGSIG 316 (540)
T ss_pred --------CCccccc--------cceEE-EE-CCCCCHHHHHHHHHHhCCceecccccccccceeecCC---CCCCCCCC
Confidence 0000000 25663 33 6667888889998888999999999999987665432 22348999
Q ss_pred ccccCeEEE-----------EeecCCCCccCCCCCCCceEEEe-cCCccccccCCcccchhhhccCcccCCCC
Q 010774 440 VPMTTVEAR-----------LESVPEMGYDALSSVPRGEICLR-GNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 440 ~p~p~~~i~-----------I~d~~~~~~~~~~~~~~Gei~v~-g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|++|+++. ++| ++|..+. ..+++|||+++ |++++.||+++++.+.+.|.+|||+|||.
T Consensus 317 ~p~~g~~i~~~~~~~~~~~~~~d-~~g~~~~-~~~~~GEl~v~~g~~~~~gY~~~~~~t~~~~~~g~~~TGD~ 387 (540)
T PRK13388 317 RGAPGVAIYNPETLTECAVARFD-AHGALLN-ADEAIGELVNTAGAGFFEGYYNNPEATAERMRHGMYWSGDL 387 (540)
T ss_pred CCCCCcEEEcCCCCccccceecc-Ccccccc-CCCcceEEEEecCCcccccccCChHHHHHHhhcCceeccce
Confidence 999997653 333 3333222 12368999998 99999999999999999888999999995
No 92
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.1e-46 Score=459.94 Aligned_cols=372 Identities=19% Similarity=0.203 Sum_probs=308.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.++++.+|+++|+++. + +.+||+||.++++++|+.|.++|+++|++|++++++++++++++||
T Consensus 1573 ~~~~~~~~~~~a~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~~~~V~l~~~~s~~~vv~~la 1643 (3956)
T PRK12467 1573 ARLVHQLIEDQAAATPEAVALVFG---E------QELTYGELNRRANRLAHRLIALGVGPEVLVGIAVERSLEMVVGLLA 1643 (3956)
T ss_pred cccHHHHHHHHHHhCCCCeEEEeC---C------cEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEccCCHHHHHHHHH
Confidence 357999999999999999999875 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.+++++++++......+... ... .++.++...
T Consensus 1644 vlkaG~~~vpldp~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~~-----~~~-~~~~~~~~~----------------- 1700 (3956)
T PRK12467 1644 ILKAGGAYVPLDPEYPRERLAYMIEDSGIELLLTQSHLQARLPLP-----DGL-RSLVLDQED----------------- 1700 (3956)
T ss_pred hhccCceeeecCCCCCHHHHHHHHHhCCCCEEEeChhhhhhCccc-----cCC-cEEEecccc-----------------
Confidence 999999999999999999999999999999999987654433110 011 222222111
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
+++.......+.....++++++|+|||||||.||||+++|.++++.+.++...+ ++..+|++++..|++|..++
T Consensus 1701 -~~~~~~~~~~~~~~~~~~~~ayiiyTSGSTG~PKGV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 1774 (3956)
T PRK12467 1701 -DWLEGYSDSNPAVNLAPQNLAYVIYTSGSTGRPKGAGNRHGALVNRLCATQEAY-----QLSAADVVLQFTSFAFDVSV 1774 (3956)
T ss_pred -chhccCCCCCCCCCCCCcCcEEEEECCCcCCCCCEEEEcCHHHHHHHHHHHHhc-----CCCcccEEEEecCccHHHHH
Confidence 111111112222344678999999999999999999999999999998877666 78899999999999999998
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+|..|+++++.+. ++..+++.|+++++|++.++|++++.+++....
T Consensus 1775 ~~~~~~L~~G~~lvi~~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~------------------------- 1829 (3956)
T PRK12467 1775 WELFWPLINGARLVIAPPGAHRDPEQLIQLIERQQVTTLHFVPSMLQQLLQMDEQ------------------------- 1829 (3956)
T ss_pred HHHHHHHhCCCEEEEcChhhcCCHHHHHHHHHHcCCeEEECCHHHHHHHHhhccc-------------------------
Confidence 888999999999999764 789999999999999999999999998752000
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCC---C-C
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLAD---V-F 432 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~---~-~ 432 (501)
..++ ++||.+++|||++++++.+.|.+.+ +..++|.||+||++..++..... . .
T Consensus 1830 -------------~~~~--------~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~t~~~~~~~~~~~ 1888 (3956)
T PRK12467 1830 -------------VEHP--------LSLRRVVCGGEALEVEALRPWLERLPDTGLFNLYGPTETAVDVTHWTCRRKDLEG 1888 (3956)
T ss_pred -------------cccC--------CCceEEEEccccCCHHHHHHHHHhCCCCeEEeCccCCcCEEeEEEEecccccccc
Confidence 0001 3899999999999999999998876 57799999999999876654332 1 1
Q ss_pred cccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c-------cCcccCCCC
Q 010774 433 NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V-------DGWFHTEVH 500 (501)
Q Consensus 433 ~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~-------dgw~~TGD~ 500 (501)
....++|+|++|++++|+| ++++++|.| .+|||+|+|+++++||+|+|+.|++.| . ++||+|||.
T Consensus 1889 ~~~~~iG~p~~~~~~~vld-~~~~~vp~G--~~GEl~i~G~~v~~GYl~~p~~t~~~f~~~p~~~~~~r~yrTGDl 1961 (3956)
T PRK12467 1889 RDSVPIGQPIANLSTYILD-ASLNPVPIG--VAGELYLGGVGLARGYLNRPALTAERFVADPFGTVGSRLYRTGDL 1961 (3956)
T ss_pred CCCCCcccccCCCEEEEEC-CCCCCCCCC--CceEEEeccccccccccCChhhhhhhCcCCCCCCCCccceeccce
Confidence 2246899999999999999 888888876 899999999999999999999999988 2 249999995
No 93
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=6.2e-47 Score=469.12 Aligned_cols=371 Identities=20% Similarity=0.239 Sum_probs=306.9
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.++++.+|+++|+++. + +.+||+||.++++++|+.|.+.|+++|++|+|+++|++++++++||
T Consensus 2002 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~lTy~eL~~~a~~lA~~L~~~gv~~g~~V~l~~~~s~~~~~~~lA 2072 (5163)
T PRK12316 2002 GPGVHQRIAEQAARAPEAIAVVFG---D------QHLSYAELDSRANRLAHRLRARGVGPEVRVAIAAERSFELVVALLA 2072 (5163)
T ss_pred CCCHHHHHHHHHHhCCCCeEEEcC---C------CeEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 357999999999999999999875 4 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.+++++++++.+....+... ... ..+.+...
T Consensus 2073 il~aGa~~vpld~~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~-~~~~~~~~------------------ 2128 (5163)
T PRK12316 2073 VLKAGGAYVPLDPNYPAERLAYMLEDSGAALLLTQRHLLERLPLP-----AGV-ARLPLDRD------------------ 2128 (5163)
T ss_pred HHhhceEEeecCCCCCHHHHHHHHHhcCCCEEEeChhhhhhcccc-----ccc-ceEeccch------------------
Confidence 999999999999999999999999999999999988655433110 011 11111110
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.. ........+.....++++++|+|||||||.||||+++|+++.+.+......+ .+..+|+++...|++|..++
T Consensus 2129 ~~-~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 2202 (5163)
T PRK12316 2129 AE-WADYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERY-----ELSPADCELQFMSFSFDGAH 2202 (5163)
T ss_pred hh-hhccCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhc-----CCCCcceEEEecCchHHHHH
Confidence 00 0111111122345678999999999999999999999999999998877766 78899999999999999888
Q ss_pred HHHHHHHhcCcEEEEecC---CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 282 IIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
..++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+.+.....
T Consensus 2203 ~~~~~~L~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------------------------- 2257 (5163)
T PRK12316 2203 EQWFHPLLNGARVLIRDDELWDPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD------------------------- 2257 (5163)
T ss_pred HHHHHHHhCCCEEEeCCcccCCHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc-------------------------
Confidence 789999999999977653 7899999999999999999999999987532110
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCc----
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFN---- 433 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~---- 433 (501)
. ...+||.+++|||++++++.++|.+.+ +..++|.||+||++..++........
T Consensus 2258 ------------~---------~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~ 2316 (5163)
T PRK12316 2258 ------------G---------RPPAVRVYCFGGEAVPAASLRLAWEALRPVYLFNGYGPTEAVVTPLLWKCRPQDPCGA 2316 (5163)
T ss_pred ------------c---------CCcceeEEEEecccCCHHHHHHHHHhCCCcEEEECccchhheeeeeeeecccccccCC
Confidence 0 002799999999999999999999876 67899999999998876654332211
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c-------cCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V-------DGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~-------dgw~~TGD~ 500 (501)
...++|+|++|++++|+| ++++.+|.| ++|||||+|+++++||+|+|+.|++.| . ++||+|||.
T Consensus 2317 ~~~~iG~p~~~~~~~i~d-~~~~~vp~g--~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl 2388 (5163)
T PRK12316 2317 AYVPIGRALGNRRAYILD-ADLNLLAPG--MAGELYLGGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDL 2388 (5163)
T ss_pred CcCCcccccCCCEEEEEC-CCCCCCCCC--CeeEEEecchhhcccccCChhhhhhhccCCCCCCCCCeeEecccE
Confidence 125799999999999999 888888776 999999999999999999999999988 2 259999995
No 94
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-46 Score=394.69 Aligned_cols=388 Identities=19% Similarity=0.237 Sum_probs=296.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch
Q 010774 34 GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP 113 (501)
Q Consensus 34 ~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 113 (501)
.++....++.++.++|+..++.+|+..++ . .++...+.+||.||..+++++|++|.++|+++||+|+++++|++
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~Ty~eL~~~~~~~a~~L~~~gi~~gd~V~l~~~n~~ 85 (579)
T PRK09192 12 SLPRRYADFPTLVEALDYAALGEAGMNFY-D-----RRGQLEEALPYQTLRARAEAGARRLLALGLKPGDRVALIAETDG 85 (579)
T ss_pred cccccccchhhHHHHHHHhhccCCceEEE-e-----cCCCEEEEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCch
Confidence 34444467789999999999998865543 2 22233478999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCEEEEecCCCC-------HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChh
Q 010774 114 EWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS 186 (501)
Q Consensus 114 ~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (501)
+++++++||+++|++++|+++..+ .+++.++++.++++++|+++...+.+.+.... ...+.
T Consensus 86 ~~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~----~~~~~-------- 153 (579)
T PRK09192 86 DFVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHG----NPLLH-------- 153 (579)
T ss_pred hHHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhcc----ccccc--------
Confidence 999999999999999999986443 68999999999999999988765554332211 00110
Q ss_pred hHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcce-eeeeccccCCC
Q 010774 187 QKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ-MFVVTGKVCSE 265 (501)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~-~~~~~~~~~~~ 265 (501)
...++++...............+++++++|||||||.||+|+++|++++..+..... .+ ....
T Consensus 154 -----------~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~-----~~~~ 217 (579)
T PRK09192 154 -----------VLSHAWFKALPEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGL-----KVRP 217 (579)
T ss_pred -----------eeehhhhcccCCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcc-----cCCC
Confidence 112222222111111222345688999999999999999999999999988877655 44 6788
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 266 ~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
+|+++..+|++|.+++.. ++.++..|+++++.+. ++..+++.+.++++++++..|.++..+.....
T Consensus 218 ~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~-------- 289 (579)
T PRK09192 218 GDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVN-------- 289 (579)
T ss_pred CCeEEEeCCCCCcchhHHHHHHHHHhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhc--------
Confidence 999999999999999885 6678999999877652 68899999999999877765554544432110
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC------CCeee
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQ 413 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~------~~l~~ 413 (501)
......++++ ++|.+++||+++++.+.+.|.+.++ ..+++
T Consensus 290 --------------------------~~~~~~~~l~--------~lr~~~~gG~~l~~~~~~~~~~~~~~~g~~~~~~~~ 335 (579)
T PRK09192 290 --------------------------SKDLAELDLS--------CWRVAGIGADMIRPDVLHQFAEAFAPAGFDDKAFMP 335 (579)
T ss_pred --------------------------cccccccchh--------hhheeEecCccCCHHHHHHHHHHHHhcCCChhhccc
Confidence 0111223344 8999999999999999999988763 35999
Q ss_pred eecccccCcceecccCCCC---------------------------cccCcccccccCeEEEEeecCCCCccCCCCCCCc
Q 010774 414 GYGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 466 (501)
Q Consensus 414 ~yG~tE~~~~~~~~~~~~~---------------------------~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~G 466 (501)
.||+||++++++....... ....++|+|+|+++++|+| +++..++.+ +.|
T Consensus 336 ~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~d-~~~~~~~~g--~~G 412 (579)
T PRK09192 336 SYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIRN-EAGMPLPER--VVG 412 (579)
T ss_pred ccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEEC-CCCCCCCCC--CEE
Confidence 9999999876654332110 1125799999999999999 888777655 899
Q ss_pred eEEEecCCccccccCCcccchhhh-ccCcccCCCCC
Q 010774 467 EICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVHR 501 (501)
Q Consensus 467 ei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~~ 501 (501)
||+++|++++.|||++ +.+.+.+ .||||+|||.+
T Consensus 413 el~i~g~~~~~gY~~~-~~~~~~~~~dgw~~TGDlg 447 (579)
T PRK09192 413 HICVRGPSLMSGYFRD-EESQDVLAADGWLDTGDLG 447 (579)
T ss_pred EEEecCCchhhhhcCC-ccccccccCCceeecccee
Confidence 9999999999999999 5566655 78999999963
No 95
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=1.3e-46 Score=466.24 Aligned_cols=371 Identities=20% Similarity=0.223 Sum_probs=308.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|+.|.+.|+++||+|+++++|++++++++||
T Consensus 510 ~~~~~~~~~~~a~~~p~~~A~~~~---~------~~~TY~eL~~~~~~lA~~L~~~gv~~g~~V~l~~~~s~~~i~~~la 580 (5163)
T PRK12316 510 QRGVHRLFEEQVERTPEAPALAFG---E------ETLDYAELNRRANRLAHALIERGVGPDVLVGVAMERSIEMVVALLA 580 (5163)
T ss_pred CCCHHHHHHHHHHHCCCCeEEEeC---C------ceEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 468999999999999999999875 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.+++++++++......+.. .....++.++...
T Consensus 581 ~~~aG~~~vpld~~~p~~rl~~il~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~----------------- 637 (5163)
T PRK12316 581 ILKAGGAYVPLDPEYPAERLAYMLEDSGVQLLLSQSHLGRKLPL------AAGVQVLDLDRPA----------------- 637 (5163)
T ss_pred HHHcCCEEeccCccCcHHHHHHHHHhCCCCEEEEChhhhhhCCc------ccCceEEEecCcc-----------------
Confidence 99999999999999999999999999999999998765433211 0011222222111
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.+..............++++++|+|||||||.||||+++|+++++.+.++...+ ++..+|++++.+|++|..++
T Consensus 638 -~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~fd~~~ 711 (5163)
T PRK12316 638 -AWLEGYSEENPGTELNPENLAYVIYTSGSTGKPKGAGNRHRALSNRLCWMQQAY-----GLGVGDTVLQKTPFSFDVSV 711 (5163)
T ss_pred -hhhccCCCCCCCCCCCCCCeEEEEECCCcCCCCCEeeEcCHHHHHHHHHHHHhc-----CCCCCCEEEeeCCeehHHHH
Confidence 011111112222334678999999999999999999999999999999887776 78899999999999999998
Q ss_pred HHHHHHHhcCcEEEEec----CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWR----GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+|+.|+++++.+ .++..+++.++++++|++.++|++++.+++..
T Consensus 712 ~~~~~~L~~G~~l~i~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~--------------------------- 764 (5163)
T PRK12316 712 WEFFWPLMSGARLVVAAPGDHRDPAKLVELINREGVDTLHFVPSMLQAFLQDE--------------------------- 764 (5163)
T ss_pred HHHHHHHhCCCEEEECCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcc---------------------------
Confidence 88999999999999975 38999999999999999999999999886410
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccC-CCCccc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLA-DVFNMI 435 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~-~~~~~~ 435 (501)
... ++ +++|.+++|||++++++.++|.+.+ +++++|.||+||++..++.... ......
T Consensus 765 ----------~~~--~~--------~~l~~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 824 (5163)
T PRK12316 765 ----------DVA--SC--------TSLRRIVCSGEALPADAQEQVFAKLPQAGLYNLYGPTEAAIDVTHWTCVEEGGDS 824 (5163)
T ss_pred ----------ccc--cC--------CCccEEEEeeccCCHHHHHHHHHhCCCCeEEeCcCcChheeeeeEEecccccCCC
Confidence 000 11 3899999999999999999997765 7889999999999865544332 223345
Q ss_pred CcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c------cCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V------DGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~------dgw~~TGD~ 500 (501)
.++|+|++|++++|+| ++++++|.| ++|||+|+|++++.||+++|+.|++.| . ++||+|||.
T Consensus 825 ~~iG~p~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GYl~~~~~t~~~f~~~~~~~~~~~y~TGDl 893 (5163)
T PRK12316 825 VPIGRPIANLACYILD-ANLEPVPVG--VLGELYLAGRGLARGYHGRPGLTAERFVPSPFVAGERMYRTGDL 893 (5163)
T ss_pred CCCccccCCCEEEEEC-CCCCCCCCC--CceEEEecccccChhhCCChhhhhhhCCCCCCCCCCeeEecCcc
Confidence 7899999999999999 888887766 899999999999999999999999988 2 359999995
No 96
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=3e-46 Score=460.01 Aligned_cols=373 Identities=18% Similarity=0.192 Sum_probs=309.7
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.++++++|+++|+++. ++ .+||+||.++++++|+.|.+.|+++|++|+|++++++++++++||
T Consensus 3719 ~~~~~~~~~~~~~~~p~~~Av~~~---~~------~~tY~eL~~~~~~la~~L~~~gv~~~~~V~v~~~~s~~~~v~~la 3789 (4334)
T PRK05691 3719 EQSYVRLFEAQVAAHPQRIAASCL---DQ------QWSYAELNRAANRLGHALRAAGVGVDQPVALLAERGLDLLGMIVG 3789 (4334)
T ss_pred ccCHHHHHHHHHHhCCCceEEEcC---CC------cccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 458999999999999999999986 53 799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCC-CCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCC-LYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
++++|++++||+|.++.+++.++++.+++++++++............... .....++....
T Consensus 3790 vlkaG~a~vpld~~~p~~r~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------ 3851 (4334)
T PRK05691 3790 SFKAGAGYLPLDPGLPAQRLQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE------------------ 3851 (4334)
T ss_pred HHhhCcEEeCCCCCChHHHHHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc------------------
Confidence 99999999999999999999999999999999999876543222111110 01111111111
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
..... ....+.....+++++||+|||||||.||||+++|+++++.+.+....+ .+..+|+++...++.+..
T Consensus 3852 ---~~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~-----~~~~~~~~~~~~s~~fd~ 3923 (4334)
T PRK05691 3852 ---VQAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYL-----ALSEADVIAQTASQSFDI 3923 (4334)
T ss_pred ---cccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhc-----CCCccceEEEecCCchhH
Confidence 11001 111122334678999999999999999999999999999998877766 889999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 280 DQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
++..++.+++.|+++++.+. ++..+++.++++++|++.++|++++.++.....
T Consensus 3924 s~~~~~~~l~~G~~l~i~~~~~~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~----------------------- 3980 (4334)
T PRK05691 3924 SVWQFLAAPLFGARVEIVPNAIAHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQ----------------------- 3980 (4334)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhccc-----------------------
Confidence 99889999999999998864 789999999999999999999999887642100
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCc-
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFN- 433 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~- 433 (501)
.+ ++||.+++|||++++++.++|.+.+ +++++|.||+||++..++........
T Consensus 3981 -----------------~~--------~~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~t~~~~~~~~~~~~~ 4035 (4334)
T PRK05691 3981 -----------------AL--------DGLRWMLPTGEAMPPELARQWLQRYPQIGLVNAYGPAECSDDVAFFRVDLAST 4035 (4334)
T ss_pred -----------------cC--------CCceEEEecCCcCCHHHHHHHHHhCCCCeEEeCccCccceeEEEEEEcccccc
Confidence 01 3799999999999999999998875 78999999999999877654433221
Q ss_pred --ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c-------cCcccCCCC
Q 010774 434 --MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V-------DGWFHTEVH 500 (501)
Q Consensus 434 --~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~-------dgw~~TGD~ 500 (501)
....+|+|++|+++.|+| ++++.+|.| .+|||+|+|+++++||+|+|+.|++.| . ++||+|||-
T Consensus 4036 ~~~~~~iG~p~~~~~~~v~d-~~~~~~p~g--~~GEL~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl 4109 (4334)
T PRK05691 4036 RGSYLPIGSPTDNNRLYLLD-EALELVPLG--AVGELCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDL 4109 (4334)
T ss_pred cCCcCCCCCccCCCEEEEEC-CCCCCCCCC--CceEEEEecccccccccCCcccchhhcccCCCCCCCceeeccCcc
Confidence 234699999999999999 888888877 899999999999999999999999988 2 469999995
No 97
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2e-45 Score=381.71 Aligned_cols=368 Identities=18% Similarity=0.232 Sum_probs=291.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
..++.+.|.+++. ++++++++. + +.+||.||.++++++|++|.++ |+++|++|+++++|+++++++++
T Consensus 4 ~~~~~~~l~~~a~--~~~~a~~~~----~-----~~~Ty~el~~~v~~lA~~L~~~~~~~~~~~V~i~~~n~~~~~~~~l 72 (529)
T PRK07867 4 APTVAELLLPLAE--DDDRGLYFE----D-----SFTSWREHIRGSAARAAALRARLDPTRPPHVGVLLDNTPEFSLLLG 72 (529)
T ss_pred cccHHHHHHHhcc--cCCceEEEC----C-----cEEeHHHHHHHHHHHHHHHHHhhCCCCCCEEEEECCCCHHHHHHHH
Confidence 4678999988875 788998864 3 5899999999999999999997 89999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|+++..+.+++.++++.++++++|++++....+.... ... .++.... ..
T Consensus 73 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~----~~~-~~~~~~~----------------~~ 131 (529)
T PRK07867 73 AAALSGIVPVGLNPTRRGAALARDIAHADCQLVLTESAHAELLDGLD----PGV-RVINVDS----------------PA 131 (529)
T ss_pred HHHhcCCEEEEecCCCChHHHHHHHHhCCCeEEEECHhHHHHHHhhc----cCc-eEEEecc----------------cc
Confidence 99999999999999999999999999999999999987665432221 111 2222211 11
Q ss_pred HHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 201 WEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
+.+++... ..........++++++|+|||||||.||+|+++|+++......+...+ ++..+|+++..+|++|.+
T Consensus 132 ~~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~~~~ 206 (529)
T PRK07867 132 WADELAAHRDAEPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRF-----GLGPDDVCYVSMPLFHSN 206 (529)
T ss_pred HHHHhcccCCCCCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhh-----CCCcccEEEEecchhHHH
Confidence 33333322 111223344678999999999999999999999999998888776665 677899999999999999
Q ss_pred HHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 280 DQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 280 g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
++.. ++.++..|+++++.+. ++..+++.++++++|++.++|+.+..++...+
T Consensus 207 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~-------------------------- 260 (529)
T PRK07867 207 AVMAGWAVALAAGASIALRRKFSASGFLPDVRRYGATYANYVGKPLSYVLATPE-------------------------- 260 (529)
T ss_pred HHHHHHHHHHhcCceEEecCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC--------------------------
Confidence 9875 6678999999988765 89999999999999999999999988764110
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s 437 (501)
.. .. ..+++| +++||+.+++.. ++|.+.+|+++++.||+||++++++... ....++
T Consensus 261 --------~~--~~---------~~~~lr-~~~gg~~~~~~~-~~~~~~~g~~l~~~YG~TE~~~~~~~~~---~~~~~~ 316 (529)
T PRK07867 261 --------RP--DD---------ADNPLR-IVYGNEGAPGDI-ARFARRFGCVVVDGFGSTEGGVAITRTP---DTPPGA 316 (529)
T ss_pred --------cc--cc---------cccceE-EEecCCCChHHH-HHHHHHhCCcEEEeecccccccccccCC---CCCCCC
Confidence 00 00 002677 456888887664 6677778999999999999986654322 123478
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCC------------CceEEE-ecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVP------------RGEICL-RGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~------------~Gei~v-~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|.|+++ ++|+|.+++..++.+ + .|||++ +|++++.||+++++.+.+.+.+|||+|||.
T Consensus 317 ~g~~~~~--~~i~~~~~~~~~~~g--~~~~~~~~~~~~~~Gel~i~~g~~~~~gy~~~~~~~~~~~~~g~~~TGD~ 388 (529)
T PRK07867 317 LGPLPPG--VAIVDPDTGTECPPA--EDADGRLLNADEAIGELVNTAGPGGFEGYYNDPEADAERMRGGVYWSGDL 388 (529)
T ss_pred cCCCCCC--EEEEECCCCCCCCCC--ccccccccccCCcceEEEEecCCcccccccCChHhhhhhhcCCeEeeccE
Confidence 9999999 677873455555554 5 899999 999999999999999998889999999994
No 98
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.3e-45 Score=382.13 Aligned_cols=369 Identities=19% Similarity=0.209 Sum_probs=299.7
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
+++.+.|+++++.+|+++++.+. + +.+||.||.++++++|.+|.+.|+.+||+|+++++|+.+++++++||
T Consensus 2 ~~~~~~l~~~a~~~p~~~~~~~~---~------~~~t~~~l~~~~~~~a~~l~~~g~~~~~~v~~~~~~~~~~~~~~~a~ 72 (503)
T PRK04813 2 MDIIETIEEFAQTQPDFPAYDYL---G------EKLTYGQLKEDSDALAAFIDSLKLPDKSPIIVFGHMSPEMLATFLGA 72 (503)
T ss_pred chHHHHHHHHHHhCCCceEEEeC---C------cEEeHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 56889999999999999998764 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++.++.+++..+++..++++++++++..... ... ..+... .+.
T Consensus 73 ~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~-~~~~~~------------------~~~ 125 (503)
T PRK04813 73 VKAGHAYIPVDVSSPAERIEMIIEVAKPSLIIATEELPLEI--------LGI-PVITLD------------------ELK 125 (503)
T ss_pred HHcCCEEecCCCCChHHHHHHHHHhcCCCEEEecccccccc--------cCC-cEEehH------------------Hhh
Confidence 99999999999999999999999999999999987641100 001 111110 011
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI 282 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~ 282 (501)
+................+++++++|||||||.||+|.++|.++..........+ .+..+++++...|++|..++.
T Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~ 200 (503)
T PRK04813 126 DIFATGNPYDFDHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDF-----ALPEGPQFLNQAPYSFDLSVM 200 (503)
T ss_pred hhhhccccccccccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHc-----CCCcCceeeecCCcchhHhHH
Confidence 111111111112334568899999999999999999999999998887766555 678899999999999999887
Q ss_pred HHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 283 IETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 283 ~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
.++.++..|+++++.+. ++..+++.++++++|++..+|++++.++....
T Consensus 201 ~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~--------------------------- 253 (503)
T PRK04813 201 DLYPTLASGGTLVALPKDMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPS--------------------------- 253 (503)
T ss_pred HHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhc---------------------------
Confidence 78899999999998764 78999999999999999999999987654210
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC----Cc
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV----FN 433 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~----~~ 433 (501)
....++ +++|.++++|+++++.+.+++.+.+ +..+++.||+||++..++...... ..
T Consensus 254 ----------~~~~~~--------~~l~~i~~~G~~l~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~ 315 (503)
T PRK04813 254 ----------FNEEHL--------PNLTHFLFCGEELPHKTAKKLLERFPSATIYNTYGPTEATVAVTSIEITDEMLDQY 315 (503)
T ss_pred ----------cCcccC--------CCceEEEEecCcCCHHHHHHHHHHCCCceEEeCcccchheeEEEEEEecccccccC
Confidence 011111 3799999999999999999999988 788999999999986554432211 23
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh--ccC--cccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDG--WFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~--~dg--w~~TGD~ 500 (501)
...++|++.++++++|+| +++..++.+ +.|||+|+|++++.||+++++.+...| .+| ||+|||.
T Consensus 316 ~~~~~g~~~~~~~~~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~g~~~~~tGD~ 383 (503)
T PRK04813 316 KRLPIGYAKPDSPLLIID-EEGTKLPDG--EQGEIVISGPSVSKGYLNNPEKTAEAFFTFDGQPAYHTGDA 383 (503)
T ss_pred CCCcccccCCCCEEEEEC-CCCCCCCCC--CceEEEEeccccccccCCChhHhHHhhccCCCceeEECCce
Confidence 346799999999999999 888777665 899999999999999999999998877 244 9999995
No 99
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-45 Score=378.13 Aligned_cols=345 Identities=25% Similarity=0.323 Sum_probs=281.7
Q ss_pred HHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEe
Q 010774 53 AKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 53 a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l 132 (501)
+...++++|+++. + +.+||+||.++++++|..|. ++|+|+++++|++++++++|||+++|++++|+
T Consensus 10 ~~~~~~~~a~~~~----~-----~~~Ty~el~~~~~~~a~~L~-----~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l 75 (471)
T PRK07787 10 AAAADIADAVRIG----G-----RVLSRSDLAGAATAVAERVA-----GARRVAVLATPTLATVLAVVGALIAGVPVVPV 75 (471)
T ss_pred hcccCCceEEEeC----C-----cEEEHHHHHHHHHHHHHHhc-----cCCEEEEECCCCHHHHHHHHHHHhcCcEEeec
Confidence 3467888998764 3 58999999999999999986 57999999999999999999999999999999
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCC
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDC 212 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (501)
++..+.+++..+++.++++.++++.+... ..+.... +... ... ..
T Consensus 76 ~~~~~~~~l~~~l~~~~~~~il~~~~~~~----------~~~~~~~-~~~~--------------~~~----------~~ 120 (471)
T PRK07787 76 PPDSGVAERRHILADSGAQAWLGPAPDDP----------AGLPHVP-VRLH--------------ARS----------WH 120 (471)
T ss_pred CCCCChHHHHHHHHhcCCCEEEecCCccc----------cccccee-eecc--------------ccc----------cc
Confidence 99999999999999999999999763110 0000000 0000 000 00
Q ss_pred CCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcC
Q 010774 213 ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKG 291 (501)
Q Consensus 213 ~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G 291 (501)
......++++++++|||||||.||+|.++|.++...+..+...+ .+..+|++++.+|++|.+|+.. ++.+++.|
T Consensus 121 ~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G 195 (471)
T PRK07787 121 RYPEPDPDAPALIVYTSGTTGPPKGVVLSRRAIAADLDALAEAW-----QWTADDVLVHGLPLFHVHGLVLGVLGPLRIG 195 (471)
T ss_pred cCCCCCCCceEEEEECCCCCCCCCEEEEeHHHHHHHHHHHHHhc-----CCCccceeEeccCCeeechhHHHHHHHHhcC
Confidence 11123568899999999999999999999999999887766655 6778899999999999999886 78899999
Q ss_pred cEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHH
Q 010774 292 CSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLD 370 (501)
Q Consensus 292 ~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (501)
+++++... ++..+++.++ +++|+++++|.++..+++... .
T Consensus 196 ~~~~~~~~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~~~~~-------------------------------------~- 236 (471)
T PRK07787 196 NRFVHTGRPTPEAYAQALS-EGGTLYFGVPTVWSRIAADPE-------------------------------------A- 236 (471)
T ss_pred CEEEecCCCCHHHHHHHHh-hCceEEEcchHHHHHHHhCcc-------------------------------------c-
Confidence 99988764 9999999999 999999999999988875100 0
Q ss_pred HHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEe
Q 010774 371 SLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLE 450 (501)
Q Consensus 371 ~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~ 450 (501)
..++ +++|.+++||+++++++.++|.+.++..+++.||+||++..++... +....++++|+|++|++++|+
T Consensus 237 ~~~l--------~~l~~~~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~-~~~~~~~~vG~~~~g~~~~i~ 307 (471)
T PRK07787 237 ARAL--------RGARLLVSGSAALPVPVFDRLAALTGHRPVERYGMTETLITLSTRA-DGERRPGWVGLPLAGVETRLV 307 (471)
T ss_pred cccc--------cceeEEEECCCCCCHHHHHHHHHHcCCCeecccCccccCcceecCC-CCcccCCcccccCCCcEEEEE
Confidence 0011 3799999999999999999999988999999999999986544332 223345789999999999999
Q ss_pred ecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 451 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 451 d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
| +++.+++...+.+|||+++|++++.||+++++.+.+.| .+|||+|||.
T Consensus 308 d-~~~~~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~~~~~~TGDl 357 (471)
T PRK07787 308 D-EDGGPVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTADGWFRTGDV 357 (471)
T ss_pred C-CCCCCCCCCCCCceEEEEECcccchhhcCChhhchhcccCCCceecCce
Confidence 9 88877764323489999999999999999999999888 5899999995
No 100
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2e-45 Score=380.20 Aligned_cols=373 Identities=17% Similarity=0.213 Sum_probs=284.7
Q ss_pred HHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEE
Q 010774 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (501)
Q Consensus 50 ~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 129 (501)
..+++.+|+++|+++. +.. +.+||+||.++++++|+.|.++|+++||+|+++++|++++++++|||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~lTy~el~~~~~~la~~L~~~gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~ 76 (501)
T PRK13390 4 GTHAQIAPDRPAVIVA---ETG----EQVSYRQLDDDSAALARVLYDAGLRTGDVVALLSDNSPEALVVLWAALRSGLYI 76 (501)
T ss_pred chhhhhCCCCcEEEec---CCC----eEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEE
Confidence 3467789999999864 322 589999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC
Q 010774 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT 209 (501)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (501)
+|+++.++.+++.++++.++++.+++++........ ... .....+.+..... ....+++......
T Consensus 77 ~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~ 141 (501)
T PRK13390 77 TAINHHLTAPEADYIVGDSGARVLVASAALDGLAAK-VGA---DLPLRLSFGGEID-----------GFGSFEAALAGAG 141 (501)
T ss_pred eccccCCCHHHHHHHHHhcCCcEEEEcchhhhHHHH-hhh---ccceEEEecCccc-----------ccccHHHHhcccC
Confidence 999999999999999999999999998754332211 111 1111112211100 0122333322111
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCceEEe--ecHHHHHHHhh----cceeeeeccccCCCCcEEEEecChHHHHHHHH
Q 010774 210 LDCELPPKKKTNISTIMYTSGTTGEPKGVVL--TNQAIVAEVLS----VDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII 283 (501)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~--sh~~l~~~~~~----~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~ 283 (501)
......++.++|+|||||||.||+|.+ +|.++...... ....+ .+..+++++..+|++|..++.+
T Consensus 142 ----~~~~~~~~~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~~~~~ 212 (501)
T PRK13390 142 ----PRLTEQPCGAVMLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFY-----DISESDIYYSSAPIYHAAPLRW 212 (501)
T ss_pred ----CCCCCCcccEEEEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHh-----CCCCCCeEEecccchhhhHHHH
Confidence 011122356999999999999999996 45554432111 11122 5678899999999999998876
Q ss_pred HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCC
Q 010774 284 ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQ 362 (501)
Q Consensus 284 ~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 362 (501)
.+..+..|+++++.+. ++..+++.++++++|++.++|+++..+++....
T Consensus 213 ~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~------------------------------ 262 (501)
T PRK13390 213 CSMVHALGGTVVLAKRFDAQATLGHVERYRITVTQMVPTMFVRLLKLDAD------------------------------ 262 (501)
T ss_pred HHHHHhcCceEEEcCCcCHHHHHHHHHHcCCeEEEecHHHHHHHHhccch------------------------------
Confidence 5556778999988765 899999999999999999999999888652100
Q ss_pred CCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccc
Q 010774 363 NKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM 442 (501)
Q Consensus 363 ~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~ 442 (501)
....+++ +++|.+++||+++++++.+.+++.++..+++.||+||+++++...........+++|+|+
T Consensus 263 -----~~~~~~~--------~~l~~v~~~g~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~ 329 (501)
T PRK13390 263 -----VRTRYDV--------SSLRAVIHAAAPCPVDVKHAMIDWLGPIVYEYYSSTEAHGMTFIDSPDWLAHPGSVGRSV 329 (501)
T ss_pred -----hcccCCh--------hhhheEEEcCCCCCHHHHHHHHHhcCCceeeeecccccCceEEecchhhccCCCCcCCcc
Confidence 0011122 278999999999999999999998899999999999998765543332233458999999
Q ss_pred cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc---cCcccCCCC
Q 010774 443 TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV---DGWFHTEVH 500 (501)
Q Consensus 443 p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~---dgw~~TGD~ 500 (501)
++ +++|+| +++..++.| +.|||+|+|++++.||+++++.+.+.+. +||++|||.
T Consensus 330 ~g-~~~i~d-~~~~~~~~g--~~Gel~v~~~~~~~gy~~~~~~t~~~~~~~~~~w~~tGDl 386 (501)
T PRK13390 330 LG-DLHICD-DDGNELPAG--RIGTVYFERDRLPFRYLNDPEKTAAAQHPAHPFWTTVGDL 386 (501)
T ss_pred cc-eEEEEC-CCCCCCCCC--CceEEEEecCCccccccCChhhhHHhhccCCCceEEcCce
Confidence 99 799999 888877665 9999999999999999999999988772 689999995
No 101
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-45 Score=388.48 Aligned_cols=387 Identities=18% Similarity=0.238 Sum_probs=283.4
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCC---CCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDG---KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~---~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
++.++|++++..+|+++|+++. +. ..+..+.+||.||..+++++|++|.+.| .+||+|+++++|++++++++|
T Consensus 2 s~~~~l~~~a~~~p~~~a~~~~---~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~g-~~gd~V~l~~~n~~~~~~~~l 77 (578)
T PRK05850 2 SVPSLLRERASLQPDDAAFTFI---DYEQDPAGVAETLTWSQLYRRTLNVAEELRRHG-STGDRAVILAPQGLEYIVAFL 77 (578)
T ss_pred cHHHHHHHHHhcCCCceEEEEE---ccCCCCCCceeeecHHHHHHHHHHHHHHHHHhC-CCCCEEEEEcCCcccHHHHHH
Confidence 5889999999999999999875 31 1122468999999999999999999999 689999999999999999999
Q ss_pred HHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC-CCCccEEEEecCCChhhHHHhhhcCc
Q 010774 121 ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRC-CLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 121 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
||+++|++++|+++ ..+.+++.++|+.+++++++++.+....+....... ......++.++..
T Consensus 78 A~~~~G~v~vpl~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 144 (578)
T PRK05850 78 GALQAGLIAVPLSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL------------- 144 (578)
T ss_pred HHHHcCceEEecCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc-------------
Confidence 99999999999997 457889999999999999999887665543321110 0011112111100
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceee-eeccccCCCCcEEEEecCh
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMF-VVTGKVCSEEDTYFSFLPL 275 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~-~~~~~~~~~~d~~l~~~pl 275 (501)
++.... .........+++++++|||||||.||||.++|++++..+......+ .........++++++.+|+
T Consensus 145 ------~~~~~~--~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 216 (578)
T PRK05850 145 ------DLDSPR--GSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPF 216 (578)
T ss_pred ------ccccCC--ccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCC
Confidence 000000 0111234568899999999999999999999999988776543321 1111124568899999999
Q ss_pred HHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHH-HHHHHHhhcCChhHHHHHHHH
Q 010774 276 AHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIY-TGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 276 ~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~-~~~~~~~~~~~~~~~~~~~~~ 348 (501)
+|.+|+.. ++.+++.|+++++.+. ++..+++.+++++++++ .+|.++..++ ....
T Consensus 217 ~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~-~~p~~~~~~~~~~~~----------------- 278 (578)
T PRK05850 217 YHDMGLVLGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFS-AAPNFAFELAVRKTS----------------- 278 (578)
T ss_pred CCCchhHHHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEE-eCCcHHHHHHHHhcc-----------------
Confidence 99999875 8889999999998863 68999999999999865 5666543332 2110
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC------CCeeeeecccccCc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLTESCS 422 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~------~~l~~~yG~tE~~~ 422 (501)
......++++ ++|.+++||+++++++.++|.+.++ ..+++.||+||++.
T Consensus 279 -----------------~~~~~~~~~~--------~lr~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~ 333 (578)
T PRK05850 279 -----------------DDDMAGLDLG--------GVLGIISGSERVHPATLKRFADRFAPFNLRETAIRPSYGLAEATV 333 (578)
T ss_pred -----------------hhhhcCcchh--------hheeEEECcCCCCHHHHHHHHHHHHhcCcCcccccCccchhhhhh
Confidence 0011122232 7999999999999999999988762 36899999999876
Q ss_pred ceecccCCCC------------------------cccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCcccc
Q 010774 423 GCFTSLADVF------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSG 478 (501)
Q Consensus 423 ~~~~~~~~~~------------------------~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~g 478 (501)
.+........ ....++|.|. +.+++|+|.+++.+++.+ +.|||+|+|+.++.|
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~~~ivd~~~~~~~~~g--~~Gel~v~g~~~~~g 410 (578)
T PRK05850 334 YVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPTVRIVDPDTCIECPAG--TVGEIWVHGDNVAAG 410 (578)
T ss_pred heeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCEEEEEcCCCCcCCCCC--CEEEEEEecCccccc
Confidence 5543221110 0012345553 579999993335556555 899999999999999
Q ss_pred ccCCcccchhhhc------------cCcccCCCCC
Q 010774 479 YYKRPDLTEEVIV------------DGWFHTEVHR 501 (501)
Q Consensus 479 Y~~~~~~~~~~~~------------dgw~~TGD~~ 501 (501)
||++++.+++.|. +|||+|||.+
T Consensus 411 Y~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~ 445 (578)
T PRK05850 411 YWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLG 445 (578)
T ss_pred ccCChhhhHHHhhcccccccccCCCCCeeecccee
Confidence 9999999998872 5799999953
No 102
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=4.2e-44 Score=393.61 Aligned_cols=420 Identities=20% Similarity=0.295 Sum_probs=327.2
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....|+.++|.+.++++|+++|+... . ..+.++.+||+|+.++++++|++|.++|+++||+|+|+++|+++|+++.
T Consensus 424 ~~~~Tl~dll~~~a~~~pd~~al~~~---~-~~g~~~~lTY~El~~~V~~lAa~L~~lGV~~GDrVaIls~N~~Ewvia~ 499 (1452)
T PTZ00297 424 AGVRSLGEMWERSVTRHSTFRCLGQT---S-ESGESEWLTYGTVDARARELGSGLLALGVRPGDVIGVDCEASRNIVILE 499 (1452)
T ss_pred ccCCCHHHHHHHHHHHCCCCeEEEEe---c-cCCCceEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34469999999999999999999642 1 1233468999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhH-HHhhhcCceE
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-KEAEELGVSC 198 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~~~~~~~~~ 198 (501)
+||+++|++++|+++ +.+++.++++.++++++|++.+....+.+... ..++.+++++....... ......+..+
T Consensus 500 lA~~~~GaV~VPly~--t~~eL~yIL~~S~akvVfv~~~~l~kl~~i~~---~~Lr~IIv~d~~~~~~~~~~~~~~~i~~ 574 (1452)
T PTZ00297 500 VACALYGFTTLPLVG--KGSTMRTLIDEHKIKVVFADRNSVAAILTCRS---RKLETVVYTHSFYDEDDHAVARDLNITL 574 (1452)
T ss_pred HHHHHcCCEEEeCCC--CHHHHHHHHHhcCCcEEEEchhHHHHHHhhcc---cCCcEEEEECCCcccccccccccCCcce
Confidence 999999999999975 46799999999999999999877776654332 26788888864211000 0001112346
Q ss_pred eeHHHHHhcCCC-CC-CCCCCCCCCeEEEEe---cCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEec
Q 010774 199 FSWEEFLQLGTL-DC-ELPPKKKTNISTIMY---TSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL 273 (501)
Q Consensus 199 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~i~~---TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 273 (501)
..+++++..+.. .. .....++++++.|+| ||||||.||||++||++++..+..+.... .......+|++++.+
T Consensus 575 ~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~--~~~~~~~~D~~Ls~L 652 (1452)
T PTZ00297 575 IPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTG--VLPSSFKKHLMVHFT 652 (1452)
T ss_pred eeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhc--cccCCCCCCEEEEec
Confidence 779998876521 11 123346788898885 99999999999999999999998764321 001345789999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHh
Q 010774 274 PLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (501)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (501)
|++|+++....+.+++.|+++.. .++..+++.|+++|||+++++|++++++.+.+..+....+.+.+++++++..++.
T Consensus 653 PLaHI~er~~~~~~l~~G~~I~~--~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~~lf~~A~~~k~ 730 (1452)
T PTZ00297 653 PFAMLFNRVFVLGLFAHGSAVAT--VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYSWLFERAFQLRS 730 (1452)
T ss_pred hHHHHHHHHHHHHHHHcCCEEEe--CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHH
Confidence 99999997777888999999874 3789999999999999999999999999999988888888999999999999887
Q ss_pred hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecC--CCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC
Q 010774 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA--PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV 431 (501)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~--~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~ 431 (501)
..+..+. .....++++.++++|+.+|+++|.+++||+ +++..+ .. ++.+..+||+||+. +......
T Consensus 731 ~~~~~g~---~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l-----~~-~i~i~~g~glTE~~---~~~~~~~ 798 (1452)
T PTZ00297 731 RLINIHR---RDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSL-----LE-HISVCYVPCLREVF---FLPSEGV 798 (1452)
T ss_pred HHHhcCC---CCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHH-----hC-CceEEEecceEEee---eecCCCC
Confidence 7666542 234578899999999999999999999984 444322 22 67788899999943 2233322
Q ss_pred CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCC
Q 010774 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEV 499 (501)
Q Consensus 432 ~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD 499 (501)
. ...|+|+|++++||.+.++.... +..|||+++ |+++|+.|++. .+||+..|.
T Consensus 799 ~---~~~G~PlpgvEvKI~~~~E~~~~----~~~GEIlvr-------~~kdpe~T~e~-~~gW~~dG~ 851 (1452)
T PTZ00297 799 F---CVDGTPAPSLQVDLEPFDEPSDG----AGIGQLVLA-------KKGEPRRTLPI-AAQWKRDRT 851 (1452)
T ss_pred c---ccCCeecCceEEEEcccccccCC----CCCCeEEEE-------ECCChHHHHHh-hCcCccCCe
Confidence 2 22399999999999984443221 246999995 45899999875 479988774
No 103
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.8e-45 Score=378.99 Aligned_cols=378 Identities=19% Similarity=0.219 Sum_probs=293.3
Q ss_pred HHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEE
Q 010774 50 CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITY 129 (501)
Q Consensus 50 ~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~ 129 (501)
...++.+|+++|+++. ++. +.+||.||.++++++|++|.+.|+++|++|+++++|+++++++++||+++|+++
T Consensus 4 ~~~a~~~p~~~a~~~~---~~~----~~~ty~~l~~~~~~la~~L~~~g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~ 76 (511)
T PRK13391 4 GIHAQTTPDKPAVIMA---STG----EVVTYRELDERSNRLAHLFRSLGLKRGDHVAIFMENNLRYLEVCWAAERSGLYY 76 (511)
T ss_pred hhhHhhCCCceEEEec---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHhccEE
Confidence 4677889999999874 332 579999999999999999999999999999999999999999999999999999
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC
Q 010774 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT 209 (501)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (501)
+++++.++.+++.++++.++++.++++......+...... .......+.+..... ......+++......
T Consensus 77 ~~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 146 (511)
T PRK13391 77 TCVNSHLTPAEAAYIVDDSGARALITSAAKLDVARALLKQ-CPGVRHRLVLDGDGE---------LEGFVGYAEAVAGLP 146 (511)
T ss_pred eccccccCHHHHHHHHhccCCcEEEEchhhHHHHHHHHhc-CCCceEEEEecCCCC---------CcccccHHHHhcCCC
Confidence 9999999999999999999999999998766554332222 222333333332111 011222333332111
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCceEEee--cHHHHHHH---hhcceeeeeccccCCCCcEEEEecChHHHHHHHHH
Q 010774 210 LDCELPPKKKTNISTIMYTSGTTGEPKGVVLT--NQAIVAEV---LSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIE 284 (501)
Q Consensus 210 ~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s--h~~l~~~~---~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~ 284 (501)
.....+.++.++++|||||||.||+|.++ |.++.... ..+...+ .+..++++++..|++|.+++...
T Consensus 147 ---~~~~~~~~~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~~~~~~ 218 (511)
T PRK13391 147 ---ATPIADESLGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLW-----GFRSDMVYLSPAPLYHSAPQRAV 218 (511)
T ss_pred ---CCCCCCcccccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhc-----CCCCCCeEEEcCCHHHHHHHHHH
Confidence 11112345678999999999999999964 55543322 2222233 56788999999999999998888
Q ss_pred HHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCC
Q 010774 285 THCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQN 363 (501)
Q Consensus 285 ~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (501)
+.++..|+++++.+. ++..+++.++++++|++.++|.++..+.+....
T Consensus 219 ~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------------------- 267 (511)
T PRK13391 219 MLVIRLGGTVIVMEHFDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEE------------------------------- 267 (511)
T ss_pred HHHHHcCceEEECCCCCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchh-------------------------------
Confidence 889999999998865 999999999999999999999999887642110
Q ss_pred CcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCccccccc
Q 010774 364 KAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMT 443 (501)
Q Consensus 364 ~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p 443 (501)
..+++++ +++|.+++||+++++++.+.+++.+|..+++.||+||++.++..........++++|+|++
T Consensus 268 ----~~~~~~~--------~~l~~~~~gg~~~~~~~~~~~~~~~g~~v~~~YG~tE~~~~~~~~~~~~~~~~~~vG~~~~ 335 (511)
T PRK13391 268 ----VRDKYDL--------SSLEVAIHAAAPCPPQVKEQMIDWWGPIIHEYYAATEGLGFTACDSEEWLAHPGTVGRAMF 335 (511)
T ss_pred ----hcccCCc--------cceeEEEEccCCCCHHHHHHHHHHcCCceeeeeccccccceEEecCccccccCCCcCCccc
Confidence 0111122 3899999999999999999999988999999999999998765443333344589999999
Q ss_pred CeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c-cCcccCCCC
Q 010774 444 TVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V-DGWFHTEVH 500 (501)
Q Consensus 444 ~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~-dgw~~TGD~ 500 (501)
+ +++|+| +++..++.| +.|||+++|+ ++.||+++++.+.+.+ . +|||+|||.
T Consensus 336 g-~~~i~d-~~~~~~~~g--~~Gel~~~g~-~~~gy~~~~~~~~~~~~~~~~w~~TGD~ 389 (511)
T PRK13391 336 G-DLHILD-DDGAELPPG--EPGTIWFEGG-RPFEYLNDPAKTAEARHPDGTWSTVGDI 389 (511)
T ss_pred c-eEEEEC-CCCCCCCCC--CceEEEEecC-cceEEcCChhHhHHhhccCCCEEecCCE
Confidence 9 699999 888776655 8999999999 8889999999998877 3 499999995
No 104
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.9e-44 Score=376.87 Aligned_cols=393 Identities=23% Similarity=0.293 Sum_probs=292.7
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|++.++.+|+++|+.+. + ..+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 18 ~~~~~~~~~~~~~~~~~~a~~~~---~------~~~ty~~L~~~~~~~a~~L~~~g~~~g~~v~i~~~~~~~~~~~~lA~ 88 (545)
T PRK08162 18 LTPLSFLERAAEVYPDRPAVIHG---D------RRRTWAETYARCRRLASALARRGIGRGDTVAVLLPNIPAMVEAHFGV 88 (545)
T ss_pred CCHHHHHHHHHHHCCCCeEEEEC---C------eEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 57889999999999999999864 3 47999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++..+.+++..+++.++++.++++.+....+.+..... ... ..+.+....... ..........++
T Consensus 89 ~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~---~~~~~~~~~~~~ 163 (545)
T PRK08162 89 PMAGAVLNTLNTRLDAASIAFMLRHGEAKVLIVDTEFAEVAREALALL-PGP-KPLVIDVDDPEY---PGGRFIGALDYE 163 (545)
T ss_pred HHhCcEEeccccccChHHHHHHHHhCCCeEEEEccchhhHHHHHHhhC-CCC-ceEEEecCcccc---ccCCCcccccHH
Confidence 999999999999999999999999999999999988766554332211 111 122222111000 000111233556
Q ss_pred HHHhcCCCCCCC-CCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 203 EFLQLGTLDCEL-PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 203 ~~~~~~~~~~~~-~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
+++......... ...+..++++++|||||||.||+|+++|.++..........+ .+..++++++.+|++|..++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~-----~~~~~~~~l~~~pl~h~~~~ 238 (545)
T PRK08162 164 AFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAW-----GMPKHPVYLWTLPMFHCNGW 238 (545)
T ss_pred HHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhc-----CCCCCCeeEeccCcHhhhhH
Confidence 665443211111 123445789999999999999999999998776655543333 56778899999999999988
Q ss_pred HHHH-HHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCC
Q 010774 282 IIET-HCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (501)
Q Consensus 282 ~~~~-~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (501)
...+ ..+..|.++++...++..+++.++++++|++.++|.+++.+++.....
T Consensus 239 ~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~--------------------------- 291 (545)
T PRK08162 239 CFPWTVAARAGTNVCLRKVDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEW--------------------------- 291 (545)
T ss_pred HHHHHHHHHccEEEEeCCCCHHHHHHHHHHcCCeEEEechHHHHHHHhCcccc---------------------------
Confidence 7644 445555555444459999999999999999999999999987521100
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC---------
Q 010774 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--------- 431 (501)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~--------- 431 (501)
...+ .+.+.++++|+++++.+.+.+++. ++++++.||+||+++.++......
T Consensus 292 ----------~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~ 352 (545)
T PRK08162 292 ----------RAGI--------DHPVHAMVAGAAPPAAVIAKMEEI-GFDLTHVYGLTETYGPATVCAWQPEWDALPLDE 352 (545)
T ss_pred ----------ccCC--------ccceEEEECCCCCCHHHHHHHHHh-CCceeecccccccCcceeecccccccccCCccc
Confidence 0000 134556789999999999998875 899999999999876544332110
Q ss_pred -CcccCcccccccC-eEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 432 -FNMIGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 432 -~~~~~s~G~p~p~-~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
....+++|.+.+. ..++|+|.+++.+++.+.++.|||+|+|+.++.||+++++.+...|.+|||+|||.
T Consensus 353 ~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl 423 (545)
T PRK08162 353 RAQLKARQGVRYPLQEGVTVLDPDTMQPVPADGETIGEIMFRGNIVMKGYLKNPKATEEAFAGGWFHTGDL 423 (545)
T ss_pred hhhccCCCCcccCCcceEEEEcCCCCcccCCCCCceeEEEEecCcchhhhcCChhhhHHHhhCCCcccCce
Confidence 0112556777653 46888883355555543335799999999999999999999999999999999995
No 105
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.6e-45 Score=383.74 Aligned_cols=383 Identities=19% Similarity=0.241 Sum_probs=292.6
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|.++++.+|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++
T Consensus 34 ~~~~tl~~~l~~~a~~~p~~~Ai~~~---~------~~~Ty~eL~~~~~~la~~L~~~g~~~gd~V~i~~~n~~~~v~~~ 104 (600)
T PRK08279 34 DSKRSLGDVFEEAAARHPDRPALLFE---D------QSISYAELNARANRYAHWAAARGVGKGDVVALLMENRPEYLAAW 104 (600)
T ss_pred CCcccHHHHHHHHHHhCCCCcEEEeC---C------CcccHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHH
Confidence 45678999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++++++.++.+++.++++.++++++|++.+....+....... .....++..++.... ...
T Consensus 105 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----------~~~ 173 (600)
T PRK08279 105 LGLAKLGAVVALLNTQQRGAVLAHSLNLVDAKHLIVGEELVEAFEEARADL-ARPPRLWVAGGDTLD----------DPE 173 (600)
T ss_pred HHHHhcCcEEeecCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHhhhh-cccceEEEecCcccc----------ccc
Confidence 999999999999999999999999999999999999987766554332221 122233333221100 011
Q ss_pred eHHHHHhcC---CC--CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecC
Q 010774 200 SWEEFLQLG---TL--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (501)
Q Consensus 200 ~~~~~~~~~---~~--~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (501)
.+.++.... .. .........+++++|+|||||||.||||.+||.+++..+..+...+ .+..+|++++.+|
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~l~~~d~~l~~~p 248 (600)
T PRK08279 174 GYEDLAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLL-----RLTPDDVLYCCLP 248 (600)
T ss_pred cHHHHhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhc-----CCCCCcEEEEecC
Confidence 223332211 11 1112334568899999999999999999999999999998876666 7889999999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (501)
++|.+++.. ++.++..|+++++.+. ++..+++.++++++|++.++|++++.+++....
T Consensus 249 l~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~-------------------- 308 (600)
T PRK08279 249 LYHNTGGTVAWSSVLAAGATLALRRKFSASRFWDDVRRYRATAFQYIGELCRYLLNQPPK-------------------- 308 (600)
T ss_pred chhhhhHHHHHHHHHhcCcEEEEcCCCCHHHHHHHHHHhcceEEeehHHHHHHHHhCCCC--------------------
Confidence 999999886 5567888999888765 899999999999999999999999887652100
Q ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCC-CeeeeecccccCcceecccCCC
Q 010774 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADV 431 (501)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~ 431 (501)
. .... .++|.+ +|+.+++++.++|.+.++. .+++.||+||++..++. .
T Consensus 309 --------------~---~~~~--------~~l~~~--~g~~l~~~~~~~~~~~~~~~~l~~~YG~tE~~~~~~~-~--- 357 (600)
T PRK08279 309 --------------P---TDRD--------HRLRLM--IGNGLRPDIWDEFQQRFGIPRILEFYAASEGNVGFIN-V--- 357 (600)
T ss_pred --------------c---cccC--------cceeEE--ecCCCCHHHHHHHHHHhCcceeeeeecccccceeecc-c---
Confidence 0 0000 266754 4778999999999999876 59999999998864332 1
Q ss_pred CcccCccccccc----CeEE---------EEeecCCCCccCCCCCCCceEE--EecCCccccccCCcccchhhh------
Q 010774 432 FNMIGTVGVPMT----TVEA---------RLESVPEMGYDALSSVPRGEIC--LRGNTLFSGYYKRPDLTEEVI------ 490 (501)
Q Consensus 432 ~~~~~s~G~p~p----~~~i---------~I~d~~~~~~~~~~~~~~Gei~--v~g~~v~~gY~~~~~~~~~~~------ 490 (501)
...++++|++.+ +..+ .|.+ .++...+...++.|||+ ++|++++.|| ++++.+.+.|
T Consensus 358 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~~ 435 (600)
T PRK08279 358 FNFDGTVGRVPLWLAHPYAIVKYDVDTGEPVRD-ADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVFK 435 (600)
T ss_pred CCCCcccccccccccccceeeeeccCcCceeeC-CCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhcccC
Confidence 223467887666 3333 2333 33332333445899998 7899999999 8888887765
Q ss_pred -ccCcccCCCC
Q 010774 491 -VDGWFHTEVH 500 (501)
Q Consensus 491 -~dgw~~TGD~ 500 (501)
.++||+|||.
T Consensus 436 ~~~~~~~TGDl 446 (600)
T PRK08279 436 KGDAWFNTGDL 446 (600)
T ss_pred CCCceEeecce
Confidence 2589999995
No 106
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=9.9e-45 Score=409.51 Aligned_cols=384 Identities=20% Similarity=0.224 Sum_probs=294.5
Q ss_pred CCCCCHHHHHHHHHHhCCC-CcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~-~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
....++.+.|.+.++++|+ +.++.+. ++ +.+||+||.++++++|+.|++ |+++||+|+++++|+++++++
T Consensus 628 ~~~~~~~~~l~~~~~~~~~~~~ai~~~---~~-----~~~Ty~el~~~~~~lA~~L~~-g~~~gd~V~i~~~n~~~~~~~ 698 (1140)
T PRK06814 628 DYDRTLFEALIEAAKIHGFKKLAVEDP---VN-----GPLTYRKLLTGAFVLGRKLKK-NTPPGENVGVMLPNANGAAVT 698 (1140)
T ss_pred cccCCHHHHHHHHHHHcCCCCeEeECC---CC-----CccCHHHHHHHHHHHHHHHHh-cCCCCCeEEEEcCCchHHHHH
Confidence 3457788999999988874 5666532 22 479999999999999999975 999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhh-hcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSIL-SCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
++||+++|++++|+||..+.+++.++++.++++.++++++..+... ............++.+++..... ..
T Consensus 699 ~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--------~~ 770 (1140)
T PRK06814 699 FFALQSAGRVPAMINFSAGIANILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQI--------GL 770 (1140)
T ss_pred HHHHHHCCCEEEEcCCCCCHHHHHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccC--------Ch
Confidence 9999999999999999999999999999999999999875443210 00000111222344433211000 00
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHH
Q 010774 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
...+.+...............++++++++|||||||.||||.++|+++..........+ ....+|++++.+|++|
T Consensus 771 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~pl~h 845 (1140)
T PRK06814 771 ADKIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARI-----DFSPEDKVFNALPVFH 845 (1140)
T ss_pred HHHHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhh-----CCCCcCEEEEecchHH
Confidence 00111111111111111134678999999999999999999999999998888776665 7788999999999999
Q ss_pred HHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.++..|+++++.+. +...+.+.++++++|+++++|++++.+.+..
T Consensus 846 ~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~------------------------ 901 (1140)
T PRK06814 846 SFGLTGGLVLPLLSGVKVFLYPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYA------------------------ 901 (1140)
T ss_pred HHHHHHHHHHHHHcCCEEEEecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc------------------------
Confidence 999864 7789999999998764 6678889999999999999999998876420
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 434 (501)
...++ +++|.+++||+++++++.+.+.+.+++++++.||+||++.+++..... ...
T Consensus 902 ---------------~~~~~--------~~lr~v~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-~~~ 957 (1140)
T PRK06814 902 ---------------HPYDF--------RSLRYVFAGAEKVKEETRQTWMEKFGIRILEGYGVTETAPVIALNTPM-HNK 957 (1140)
T ss_pred ---------------ccccc--------cceeEEEEcCCcCCHHHHHHHHHHhCCcEEeccccccccceEEecCCC-CCC
Confidence 01112 389999999999999999999999999999999999998876654432 234
Q ss_pred cCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchh-hhccCcccCCCC
Q 010774 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEE-VIVDGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~-~~~dgw~~TGD~ 500 (501)
.+++|+|+||+++++++ .++ .++.|||+++|++++.||+++++.... ...+|||+|||.
T Consensus 958 ~~~vG~p~~g~~~~~~~-~~~------~~~~Gel~v~g~~~~~gY~~~~~~~~~~~~~~g~~~TGDl 1017 (1140)
T PRK06814 958 AGTVGRLLPGIEYRLEP-VPG------IDEGGRLFVRGPNVMLGYLRAENPGVLEPPADGWYDTGDI 1017 (1140)
T ss_pred CCcCCccCCCCeEEEee-cCC------CCCceEEEEeCCCcchhhcCCCCCCccccCCCCeEecCCE
Confidence 58999999999999988 432 237899999999999999987654322 226899999995
No 107
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.5e-44 Score=373.82 Aligned_cols=363 Identities=19% Similarity=0.236 Sum_probs=286.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
+.+||.||.++++++|++|.+.|+++||+|+++++|++++++++|||+++|++++|+++.++.+++..+++.++++.+++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ii~ 89 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRALGLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKVLIV 89 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010774 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (501)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~P 235 (501)
+......+.+...........++...... .....+++...... .......++.++++|||||||.|
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSGtTG~P 155 (502)
T PRK08276 90 SAALADTAAELAAELPAGVPLLLVVAGPV-----------PGFRSYEEALAAQP---DTPIADETAGADMLYSSGTTGRP 155 (502)
T ss_pred ccchhhHHHHHhhhccccccEEEEeCCCC-----------CccccHHHHHhcCC---CCCCCCCCcceEEEECCCCCCCC
Confidence 98766555333222111344444442111 11223444433221 11223456789999999999999
Q ss_pred ceEEeecHHHHHHHh--hcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhc
Q 010774 236 KGVVLTNQAIVAEVL--SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELK 312 (501)
Q Consensus 236 K~v~~sh~~l~~~~~--~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~ 312 (501)
|+|.++|.++..... ........ ......++++++..|++|..++...+.++..|+++++.+. ++..+++.+++++
T Consensus 156 K~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~ 234 (502)
T PRK08276 156 KGIKRPLPGLDPDEAPGMMLALLGF-GMYGGPDSVYLSPAPLYHTAPLRFGMSALALGGTVVVMEKFDAEEALALIERYR 234 (502)
T ss_pred ceEEEccCCcchhhhhHHhhhhhhh-cccCCCCCEEEEcCcHHHHHHHHHHHHHHhccceEEEcCCCCHHHHHHHHHHhC
Confidence 999999887654321 11000000 0123577899999999999998887789999999988865 8999999999999
Q ss_pred CcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEec
Q 010774 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (501)
Q Consensus 313 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG 392 (501)
+|+++++|+++..+++.. ......++++ ++|.+++||
T Consensus 235 ~t~~~~~P~~~~~l~~~~-----------------------------------~~~~~~~~~~--------~lr~i~~~g 271 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLP-----------------------------------EEVRARYDVS--------SLRVAIHAA 271 (502)
T ss_pred CeEEEehHHHHHHHHhCc-----------------------------------cccCCCCCcc--------cceEEEecC
Confidence 999999999999887521 0011122333 899999999
Q ss_pred CCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec
Q 010774 393 APLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG 472 (501)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g 472 (501)
++++.++.+++.+.++..+++.||+||++.+++....+.....+++|+|+ +++++|+| +++.+++.+ +.|||+++|
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~G~~~-~~~~~i~d-~~~~~~~~g--~~Gel~v~~ 347 (502)
T PRK08276 272 APCPVEVKRAMIDWWGPIIHEYYASSEGGGVTVITSEDWLAHPGSVGKAV-LGEVRILD-EDGNELPPG--EIGTVYFEM 347 (502)
T ss_pred CCCCHHHHHHHHHHhCcHhhhhcccccccceeEecCccccccCCCcceec-ccEEEEEC-CCCCCCcCC--CceEEEEEC
Confidence 99999999999998899999999999999877665444344558999999 88999999 888777655 899999999
Q ss_pred CCccccccCCcccchhhh-ccCcccCCCC
Q 010774 473 NTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 473 ~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
+.++.||+++++.+.+.+ .+|||+|||.
T Consensus 348 ~~~~~gy~~~~~~~~~~~~~~~~~~TGD~ 376 (502)
T PRK08276 348 DGYPFEYHNDPEKTAAARNPHGWVTVGDV 376 (502)
T ss_pred CCccchhcCCHHHHHHHhcCCCceeecce
Confidence 999999999999999888 5699999995
No 108
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-44 Score=376.71 Aligned_cols=375 Identities=20% Similarity=0.228 Sum_probs=290.9
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.++.+.|...+..+|+.+++... +.. +.+||.||.++++++|++|.+.|+++||+|+++++|+++++++++||
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~---~~~----~~~ty~el~~~v~~~a~~L~~~g~~~gd~V~l~~~~~~~~~~~~la~ 74 (545)
T PRK07768 2 SRFTEKMYANARTSPRGMVTGEP---DAP----VRHTWGEVHERARRIAGGLAAAGVGPGDAVAVLAGAPVEIAPTAQGL 74 (545)
T ss_pred chHHHHHHHHhhCCCcceEEecC---CCc----eEecHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCchHHHHHHHHH
Confidence 56889999999999999988654 432 68999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHH-------HHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 123 NSQAITYVPLYDTLGANAV-------EFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l-------~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
+++|++++++++..+.+++ ..+++.++++.+++++........ .... .
T Consensus 75 ~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~------------------------~ 129 (545)
T PRK07768 75 WMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPV-LEEK------------------------G 129 (545)
T ss_pred HHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhh-hccc------------------------C
Confidence 9999999999988776544 456777899999998754432211 1000 0
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCC-cEEEEecC
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEE-DTYFSFLP 274 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~-d~~l~~~p 274 (501)
..+..++++..... ........+++++|+|||||||.||+|+++|+++......+...+ ++..+ |++++.+|
T Consensus 130 ~~~~~~~~l~~~~~--~~~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~d~~~~~~p 202 (545)
T PRK07768 130 IRVLTVADLLAADP--IDPVETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAA-----EFDVETDVMVSWLP 202 (545)
T ss_pred CceeehhhhcccCC--CCcCCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhc-----CCCCCCceeEEeCC
Confidence 11334444443221 122344578999999999999999999999999999887765554 55555 89999999
Q ss_pred hHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 275 LAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 275 l~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
++|..++.. ++.++..|+++++.+. ++..+.+.+++++++++.++|.++..+.+.+.....
T Consensus 203 ~~~~~g~~~~~~~~l~~g~~~v~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~------------- 269 (545)
T PRK07768 203 LFHDMGMVGFLTVPMYFGAELVKVTPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAK------------- 269 (545)
T ss_pred CccchHHHHHHHHHHHCCceEEEeCHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhcccc-------------
Confidence 999999885 6678999999988753 678889999999999988777777666543211100
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh---hCC---CeeeeecccccCc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT---SGA---PLTQGYGLTESCS 422 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~---~~~---~l~~~yG~tE~~~ 422 (501)
...+++ +++|.+++||+++++++.+++.+. +|. .+++.||+||++.
T Consensus 270 --------------------~~~~~~--------~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~yG~tE~~~ 321 (545)
T PRK07768 270 --------------------PGAFDL--------SSLRFALNGAEPIDPADVEDLLDAGARFGLRPEAILPAYGMAEATL 321 (545)
T ss_pred --------------------ccCCCc--------hheeeEEeccCCCCHHHHHHHHHHHHhcCCCcccccccccccccce
Confidence 001222 289999999999999999998874 454 4999999999987
Q ss_pred ceecccCCC-------------------------CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccc
Q 010774 423 GCFTSLADV-------------------------FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 477 (501)
Q Consensus 423 ~~~~~~~~~-------------------------~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~ 477 (501)
.++...... ...++++|+|+++++++|+| ++++.++.+ +.|||+++|+.++.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~-~~~~~~~~g--~~Gel~v~~~~~~~ 398 (545)
T PRK07768 322 AVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVD-EDGQVLPPR--GVGVIELRGESVTP 398 (545)
T ss_pred EEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEEC-CCCCCCCCC--CEEEEEEccCcccc
Confidence 655432211 11346899999999999999 888777655 89999999999999
Q ss_pred cccCCcccchhhhccCcccCCCC
Q 010774 478 GYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 478 gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
||++++........+|||+|||.
T Consensus 399 gy~~~~~~~~~~~~~g~~~TGDl 421 (545)
T PRK07768 399 GYLTMDGFIPAQDADGWLDTGDL 421 (545)
T ss_pred cccCCCCCcccccCCCeeeccce
Confidence 99987655544447899999995
No 109
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=4.7e-44 Score=360.42 Aligned_cols=342 Identities=23% Similarity=0.319 Sum_probs=280.7
Q ss_pred eHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 79 TYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 79 Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
||.||.+.++++|++|.+ .|+++||+|+++++|+++++++++||+++|++++|+++.++.+++..+++.++++.++++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~l~~~~~~~ii~~~ 80 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAGGVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAERLAFILEDAGARLLLTDS 80 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHHHHHHHHhcCCCEEEEcC
Confidence 799999999999999998 8999999999999999999999999999999999999999999999999999999999998
Q ss_pred CChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 010774 158 NKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPK 236 (501)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK 236 (501)
.....+..... .+..+... +....... ...........+++++++|||||||.||
T Consensus 81 ~~~~~~~~~~~-------~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK 136 (408)
T TIGR01733 81 ALASRLAGLVL-------PIILVDPL-----------------ELAALDDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPK 136 (408)
T ss_pred chhhhccccCC-------ceEEechh-----------------hhhhcccccccccccCCCCCCCcEEEEEcCCCCCCCC
Confidence 76654422211 11111110 00000000 0011111134688999999999999999
Q ss_pred eEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhc
Q 010774 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELK 312 (501)
Q Consensus 237 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~ 312 (501)
+|.+||.++......+...+ .+..+|++++..|++|.+++..++.++..|+++++.+. .+..+.+.+++++
T Consensus 137 ~v~~s~~~~~~~~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (408)
T TIGR01733 137 GVVVTHRSLVNLLAWLARRY-----GLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVPPEDEERDAALLAALIAEHP 211 (408)
T ss_pred EEEeccHHHHHHHHHHHHhc-----CCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEcChhhccCHHHHHHHHHHcC
Confidence 99999999999998877665 77789999999999999998889999999999998775 3688999999999
Q ss_pred CcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEec
Q 010774 313 PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGA 392 (501)
Q Consensus 313 ~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG 392 (501)
+|.+.++|.+++.+++... .++ +++|.+++||
T Consensus 212 ~t~l~~~p~~~~~l~~~~~----------------------------------------~~~--------~~l~~v~~~g 243 (408)
T TIGR01733 212 VTVLNLTPSLLALLAAALP----------------------------------------PAL--------ASLRLVILGG 243 (408)
T ss_pred ceEEEeCHHHHHHHHHhhh----------------------------------------hcc--------cCceEEEEeC
Confidence 9999999999999876321 111 3899999999
Q ss_pred CCCCHHHHHHHHHhhC-CCeeeeecccccCcceecccCCCCc----ccCcccccccCeEEEEeecCCCCccCCCCCCCce
Q 010774 393 APLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFN----MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGE 467 (501)
Q Consensus 393 ~~~~~~~~~~~~~~~~-~~l~~~yG~tE~~~~~~~~~~~~~~----~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Ge 467 (501)
+++++++.+.|.+.++ +.+++.||+||++.+++........ .+.++|+|+++++++|+| +++..++.+ +.||
T Consensus 244 ~~~~~~~~~~~~~~~~~~~i~~~YG~tE~g~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~~~~~g--~~Ge 320 (408)
T TIGR01733 244 EALTPALVDRWRARGPGARLINLYGPTETTVWSTATLVDADDAPRESPVPIGRPLANTRLYVLD-DDLRPVPVG--VVGE 320 (408)
T ss_pred ccCCHHHHHHHHHhCCCcEEEecccCCceEEEEEEEEcCccccCCccccccCcccCCceEEEEC-CCCCCCCCC--CceE
Confidence 9999999999999997 8999999999999877533222211 157899999999999999 777766655 8999
Q ss_pred EEEecCCccccccCCcccchhhhc-------cC--cccCCCC
Q 010774 468 ICLRGNTLFSGYYKRPDLTEEVIV-------DG--WFHTEVH 500 (501)
Q Consensus 468 i~v~g~~v~~gY~~~~~~~~~~~~-------dg--w~~TGD~ 500 (501)
|+|+|++++.||+++++.+.+.|. +| ||+|||.
T Consensus 321 l~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl 362 (408)
T TIGR01733 321 LYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDL 362 (408)
T ss_pred EEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCce
Confidence 999999999999999999988772 23 9999995
No 110
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-43 Score=365.02 Aligned_cols=392 Identities=21% Similarity=0.245 Sum_probs=299.2
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
.|+.++|.+.++++|+++|+++. + +.+||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 3 ~~l~~~~~~~a~~~p~~~a~~~~---~------~~~ty~el~~~~~~la~~L~~~g~~~~~~v~v~~~n~~~~~~~~~a~ 73 (533)
T PRK07798 3 WNIADLFEAVADAVPDRVALVCG---D------RRLTYAELEERANRLAHYLIAQGLGPGDHVGIYARNRIEYVEAMLGA 73 (533)
T ss_pred ccHHHHHHHHHHhCCCceEEEEC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 37999999999999999999875 3 48999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|+++.++.+++.++++.++++.++++......+.+... .....+.++.++..... ........++
T Consensus 74 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~ 146 (533)
T PRK07798 74 FKARAVPVNVNYRYVEDELRYLLDDSDAVALVYEREFAPRVAEVLP-RLPKLRTLVVVEDGSGN------DLLPGAVDYE 146 (533)
T ss_pred HhcCeEEEecCcCCCHHHHHHHHhhcCCCEEEEchhhHHHHHHHhc-cCCCccEEEEecCCccc------ccCCccccHH
Confidence 9999999999999999999999999999999999876665544322 22444556555543211 0011234566
Q ss_pred HHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeee----ccccC------CCCcEEEEe
Q 010774 203 EFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVV----TGKVC------SEEDTYFSF 272 (501)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~----~~~~~------~~~d~~l~~ 272 (501)
+++............ .++.++|+|||||||.||+|+++|.++..........+.. ....+ ..+++++..
T Consensus 147 ~~~~~~~~~~~~~~~-~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 147 DALAAGSPERDFGER-SPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHhccCCcCCCCCC-CCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 666543222222222 3345789999999999999999999987655442211100 00111 567899999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEec--C-CHHHHHHHHhhhcCcEEEecchHHHH-HHHHHHHHhhcCChhHHHHHHHH
Q 010774 273 LPLAHIYDQIIETHCIHKGCSIGFWR--G-DVRYLMEDIQELKPTMFSGVPRVYDR-IYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~~~~~--~-~~~~~~~~i~~~~~t~~~~~P~~~~~-l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
+|++|..++..++.+++.|+++++.+ . ++..+++.++++++|.+.++|..+.. +.+.+. .
T Consensus 226 ~pl~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~-~--------------- 289 (533)
T PRK07798 226 PPLMHGAGQWAAFAALFSGQTVVLLPDVRFDADEVWRTIEREKVNVITIVGDAMARPLLDALE-A--------------- 289 (533)
T ss_pred cchhhhhhHHHHHHHHhcCceEEEecCCCcCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhc-c---------------
Confidence 99999999988899999999999988 3 89999999999999999999876643 332211 0
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTS 427 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~ 427 (501)
....++ +++|.+++||+++++++.+++++.+ +..+++.||+||++.+....
T Consensus 290 --------------------~~~~~~--------~~l~~i~~gG~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~ 341 (533)
T PRK07798 290 --------------------RGPYDL--------SSLFAIASGGALFSPSVKEALLELLPNVVLTDSIGSSETGFGGSGT 341 (533)
T ss_pred --------------------cccCCC--------CceEEEEECCCCCCHHHHHHHHHHcCCCeEEeeecccccccccccC
Confidence 000111 3899999999999999999999988 78899999999997655433
Q ss_pred cCCCCcccCccc--ccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc--c--CcccCCCC
Q 010774 428 LADVFNMIGTVG--VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV--D--GWFHTEVH 500 (501)
Q Consensus 428 ~~~~~~~~~s~G--~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~--d--gw~~TGD~ 500 (501)
..... ...| ++.++..++|+| +++..++.+....|+|+ +++.++.||+++++.+++.|. + +||+|||.
T Consensus 342 ~~~~~---~~~g~~~~~~~~~~~i~~-~~~~~~~~g~~~~g~l~-~~~~~~~gy~~~~~~t~~~f~~~~~~~~~~TGD~ 415 (533)
T PRK07798 342 VAKGA---VHTGGPRFTIGPRTVVLD-EDGNPVEPGSGEIGWIA-RRGHIPLGYYKDPEKTAETFPTIDGVRYAIPGDR 415 (533)
T ss_pred CCCCC---ccCCCCccCCCceEEEEC-CCCCCCCCCCCCeeEEE-eecCccccccCChhhhHHhhccCCCCceEEcCcE
Confidence 22111 2334 788999999999 88887766622226665 566899999999999988872 3 59999995
No 111
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=5.7e-44 Score=365.05 Aligned_cols=338 Identities=26% Similarity=0.315 Sum_probs=276.8
Q ss_pred CCHHHHH-HHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFF-CDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l-~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+++.+.+ ..+++.+|+++|+++. + +.+||.||.++++++|.+|.+.|+++||+|+++++|+++++++++|
T Consensus 2 ~~~~~~~~~~~a~~~~~~~a~~~~----~-----~~~ty~el~~~~~~~a~~L~~~g~~~~~~v~l~~~~~~~~~~~~la 72 (458)
T PRK09029 2 MIFSDWPWRHWAQVRPQAIALRLN----D-----EVLTWQQLCARIDQLAAGFAQQGVVEGSGVALRGKNSPETLLAYLA 72 (458)
T ss_pred chhhcChHHHHHHhCCCceeeecC----C-----cceeHHHHHHHHHHHHHHHHHcCCCCCCEEEEecCCCHHHHHHHHH
Confidence 4455555 5568899999999754 2 4799999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|+++..+.+++..+++.++++.++++.+... +.. +... ..
T Consensus 73 ~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-~~~--------~~~~----------------------~~ 121 (458)
T PRK09029 73 LLQCGARVLPLNPQLPQPLLEELLPSLTLDFALVLEGENT-FSA--------LTSL----------------------HL 121 (458)
T ss_pred HHHcCCEEeecCCCCCHHHHHHHHHhcCCCEEEEcCcccc-hhh--------cccc----------------------cc
Confidence 9999999999999999999999999999999998776432 100 0000 00
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
. ...........++++++++|||||||.||+|.+||++++..+......+ ....+|+++..+|++|.+++
T Consensus 122 ~-----~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~h~~g~ 191 (458)
T PRK09029 122 Q-----LVEGAHAVAWQPQRLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLM-----PFTAQDSWLLSLPLFHVSGQ 191 (458)
T ss_pred c-----cccccCcccCCCCCeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcC-----CCCccceEEEecCcHhhhhh
Confidence 0 0001112234578899999999999999999999999999988776665 67889999999999999998
Q ss_pred HHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCC
Q 010774 282 IIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMP 361 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (501)
..++.++..|+++++.+. ..+++.+ .++|.+..+|+++..++.....
T Consensus 192 ~~~~~~l~~G~~v~~~~~--~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~----------------------------- 238 (458)
T PRK09029 192 GIVWRWLYAGATLVVRDK--QPLEQAL--AGCTHASLVPTQLWRLLDNRSE----------------------------- 238 (458)
T ss_pred HHHHHHHhCCceEEeCCh--HHHHHHH--hhceeeecChHHHHHHHhcccc-----------------------------
Confidence 878889999999998764 4566666 4899999999999887652100
Q ss_pred CCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCccccc
Q 010774 362 QNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVP 441 (501)
Q Consensus 362 ~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p 441 (501)
..++|.+++||+++++.+.+.+.+. +.++++.||+||++..++....+ ...++|+|
T Consensus 239 --------------------~~~l~~i~~gG~~~~~~~~~~~~~~-g~~~~~~YG~tE~~~~~~~~~~~---~~~~~G~~ 294 (458)
T PRK09029 239 --------------------PLSLKAVLLGGAAIPVELTEQAEQQ-GIRCWCGYGLTEMASTVCAKRAD---GLAGVGSP 294 (458)
T ss_pred --------------------CCcceEEEECCCCCCHHHHHHHHHc-CCcEeccccccccCcceeccCCC---CCCCCCCC
Confidence 0278999999999999999998865 99999999999998765543322 22569999
Q ss_pred ccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCCC
Q 010774 442 MTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVHR 501 (501)
Q Consensus 442 ~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~~ 501 (501)
+++++++|++ |||+|+|+.++.||+++++.+.....+|||+|||.+
T Consensus 295 ~~~~~~~i~~--------------gel~v~g~~~~~gY~~~~~~~~~~~~~~~~~TGD~~ 340 (458)
T PRK09029 295 LPGREVKLVD--------------GEIWLRGASLALGYWRQGQLVPLVNDEGWFATRDRG 340 (458)
T ss_pred CCCCEEEEeC--------------CEEEEecCceeeeeecCccccccccCCCccCCCCcE
Confidence 9999999986 899999999999999999887665578999999963
No 112
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.4e-43 Score=367.21 Aligned_cols=367 Identities=20% Similarity=0.212 Sum_probs=285.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
+.+||.||.++++++|++|.++|+++||+|+++++|+++++++++||+++|+++++++|..+.+++..+++.++++++++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~i~~ 89 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAALGVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEEIAYILEDSGARVLIA 89 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHHHHHHHhccCCcEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCChhhhhhcCccCCCCccEEEEecCCChhhH-----HHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCC
Q 010774 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQK-----KEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSG 230 (501)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSG 230 (501)
+......+.+.... . ..++.......... ............++++..... .......+++++++||||
T Consensus 90 ~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~a~i~~TSG 162 (509)
T PRK12406 90 HADLLHGLASALPA---G-VTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQE---PYDGPPVPQPQSMIYTSG 162 (509)
T ss_pred ccchhhhhhhhhhc---c-cceeecccccccccccccccccccCCCCccCHHHHhcccC---ccCCCCCCCceEEEECCC
Confidence 88766554332211 1 11111111100000 000001112334555443221 122334688999999999
Q ss_pred CCCCCceEEeecHHHHHH---HhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHH
Q 010774 231 TTGEPKGVVLTNQAIVAE---VLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLME 306 (501)
Q Consensus 231 tTG~PK~v~~sh~~l~~~---~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~ 306 (501)
|||.||+|.++|.+.... .......+ ++..++++++..|++|..+..+.+.++..|+++++.+. ++..+++
T Consensus 163 tTG~PK~v~~s~~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 237 (509)
T PRK12406 163 TTGHPKGVRRAAPTPEQAAAAEQMRALIY-----GLKPGIRALLTGPLYHSAPNAYGLRAGRLGGVLVLQPRFDPEELLQ 237 (509)
T ss_pred CCCCCceEEEechhHHHHHHHHHhhhhhc-----CCCCCceEEEEeCCcccchHHHHHHHHhhheEEEEccCCCHHHHHH
Confidence 999999999977654333 33333333 67888999999999999888777778889999988765 8999999
Q ss_pred HHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCcee
Q 010774 307 DIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ 386 (501)
Q Consensus 307 ~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr 386 (501)
.++++++|.+.++|.+++.+++.... ..+.+++ +++|
T Consensus 238 ~l~~~~~t~~~~~P~~~~~l~~~~~~-----------------------------------~~~~~~~--------~~l~ 274 (509)
T PRK12406 238 LIERHRITHMHMVPTMFIRLLKLPEE-----------------------------------VRAKYDV--------SSLR 274 (509)
T ss_pred HHHHcCCeEEEccHHHHHHHHhCchh-----------------------------------hcccCCC--------Ccee
Confidence 99999999999999999988752110 0111122 3899
Q ss_pred EEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCc
Q 010774 387 AMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 466 (501)
Q Consensus 387 ~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~G 466 (501)
.+++||+++++++.+++.+.++..+++.||+||++.+++....+....++++|+|+++++++|+| +++..++.+ +.|
T Consensus 275 ~v~~gg~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d-~~~~~~~~g--~~G 351 (509)
T PRK12406 275 HVIHAAAPCPADVKRAMIEWWGPVIYEYYGSTESGAVTFATSEDALSHPGTVGKAAPGAELRFVD-EDGRPLPQG--EIG 351 (509)
T ss_pred EEEEcCCCCCHHHHHHHHHHcCCcEEeeccccccCceEecCcccccccCCCcCccCCCcEEEEEC-CCCCCCCCC--Cce
Confidence 99999999999999999998899999999999999877655444444568999999999999999 888777665 899
Q ss_pred eEEEecCCccc-cccCCcccchhhhccCcccCCCC
Q 010774 467 EICLRGNTLFS-GYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 467 ei~v~g~~v~~-gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
||+++|+.++. ||+++++.++..+.+|||+|||.
T Consensus 352 el~v~~~~~~~~~y~~~~~~~~~~~~~~~~~TGD~ 386 (509)
T PRK12406 352 EIYSRIAGNPDFTYHNKPEKRAEIDRGGFITSGDV 386 (509)
T ss_pred EEEEECCccccccccCCchhcccccCCCCeEEccE
Confidence 99999999875 99999998887778999999995
No 113
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=1.5e-42 Score=352.56 Aligned_cols=326 Identities=25% Similarity=0.356 Sum_probs=267.3
Q ss_pred eHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 79 TYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 79 Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
||+||.++++++|+.|.+.|+++||+|+++++|+++++++++||+++|++++|+++..+.+++..+++.++++.+++++.
T Consensus 1 Ty~~l~~~~~~~a~~l~~~g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 80 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQGIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENERTNQLEDLDVQLLLTDSL 80 (436)
T ss_pred CHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHHHHHHHHhcCCCEEEEcCc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999876
Q ss_pred ChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCce
Q 010774 159 KIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKG 237 (501)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 237 (501)
...... .. ..+..+..... ..........+++++++|||||||.||+
T Consensus 81 ~~~~~~-----------~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~ 128 (436)
T TIGR01923 81 LEEKDF-----------QA---------------------DSLDRIEAAGRYETSLSASFNMDQIATLMFTSGTTGKPKA 128 (436)
T ss_pred ccccce-----------ee---------------------cchHhhhhcccccccccccCCcCceEEEEeCCCCCCCCcE
Confidence 321110 00 00111111110 0111223456789999999999999999
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecCCHHHHHHHHhhhcCcEEE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRGDVRYLMEDIQELKPTMFS 317 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~ 317 (501)
|.++|.++...+......+ +...+|++++..|++|..++..++.++..|+++++.+.. ..+++.++++++|++.
T Consensus 129 v~~s~~~~~~~~~~~~~~~-----~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~-~~~~~~l~~~~~t~~~ 202 (436)
T TIGR01923 129 VPHTFRNHYASAVGSKENL-----GFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVDKF-NQLLEMIANERVTHIS 202 (436)
T ss_pred EEEehHHHHHHHHHHHhhc-----CCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecchH-HHHHHHHHHhCCeEEE
Confidence 9999999999888877666 788999999999999999988888999999999987643 3899999999999999
Q ss_pred ecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCH
Q 010774 318 GVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPI 397 (501)
Q Consensus 318 ~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~ 397 (501)
++|.++..+++.. ... .++|.+++||+++++
T Consensus 203 ~~P~~l~~l~~~~-------------------------------------~~~------------~~l~~~~~~G~~~~~ 233 (436)
T TIGR01923 203 LVPTQLNRLLDEG-------------------------------------GHN------------ENLRKILLGGSAIPA 233 (436)
T ss_pred eHHHHHHHHHhCc-------------------------------------CCC------------CceEEEEECCCCCCH
Confidence 9999999887521 000 279999999999999
Q ss_pred HHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccc
Q 010774 398 HVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFS 477 (501)
Q Consensus 398 ~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~ 477 (501)
++.+.+++. ++.+++.||+||++..++....+......++|+|+++++++|.+ ++.. +.|||+++|+.++.
T Consensus 234 ~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~~-~~~~-------~~Gel~v~~~~~~~ 304 (436)
T TIGR01923 234 PLIEEAQQY-GLPIYLSYGMTETCSQVTTATPEMLHARPDVGRPLAGREIKIKV-DNKE-------GHGEIMVKGANLMK 304 (436)
T ss_pred HHHHHHHHh-CCceeeEecCCccchhccCcCccccccccCCCccCCCcEEEEEe-CCCC-------CceEEEEECCccch
Confidence 999988764 99999999999998766544433322223599999999999954 3221 68999999999999
Q ss_pred cccCCcccchhhhccCcccCCCC
Q 010774 478 GYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 478 gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
||+++++.+...+.+|||+|||.
T Consensus 305 gy~~~~~~~~~~~~~~~~~TGD~ 327 (436)
T TIGR01923 305 GYLYQGELTPAFEQQGWFNTGDI 327 (436)
T ss_pred hhCCChhhhhhhhcCCCeeccce
Confidence 99998888877668899999995
No 114
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.2e-42 Score=353.12 Aligned_cols=309 Identities=17% Similarity=0.145 Sum_probs=247.4
Q ss_pred eeHHHHHHHHHHHHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEc
Q 010774 78 LTYQEVYDAAIRFGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 78 ~Ty~el~~~v~~~A~~L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~ 156 (501)
+.|+||.++++++|++|.+.|+ ++|++|+++++|+++++++++||+++|++++|++|.++.+++.++++.+++++++++
T Consensus 20 ~~~~el~~~~~~~a~~L~~~g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~~~~~~~~~~~~~~i~~ 99 (452)
T PRK07445 20 YNSQRFYQLAQQLYLQLQQLATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQEWQQVLNLVQPDQIWGL 99 (452)
T ss_pred cChHHHHHHHHHHHHHHHHhcCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHHHHHHHHhcCCCEEEec
Confidence 6899999999999999999988 579999999999999999999999999999999999999999999999999999987
Q ss_pred CCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 010774 157 ENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPK 236 (501)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK 236 (501)
.+..... .... ........++++++++|||||||.||
T Consensus 100 ~~~~~~~----------------~~~~---------------------------~~~~~~~~~~~~~~i~~TSGTTG~PK 136 (452)
T PRK07445 100 DQLKLSH----------------PPPL---------------------------PSQGILPNLETGWIMIPTGGSSGQIR 136 (452)
T ss_pred Ccccccc----------------CCCC---------------------------CccccCCCCCCcEEEEeCCCCCCCCc
Confidence 6532110 0000 00001124578999999999999999
Q ss_pred eEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcE
Q 010774 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTM 315 (501)
Q Consensus 237 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~ 315 (501)
+|++||.++...+......+ .+.. ++.++.+|++|.+|+..++.+++.|+++++.+. ..........++++++
T Consensus 137 gV~~t~~~l~~~~~~~~~~~-----~~~~-~~~~~~~Pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~~~~~~t~ 210 (452)
T PRK07445 137 FAIHTWETLTASVQGFQRYF-----QLQQ-VNSFCVLPLYHVSGLMQFMRSFLTGGKLVILPYKRLKSGQELPPNPSDFF 210 (452)
T ss_pred EEEechHHHHHHHHHHHHHh-----cCCC-CceEeccCchhhhhHHHHHHHHHcCCeEEEcChHhccchhhhhhhcCceE
Confidence 99999999988887765544 3433 467889999999999888899999999998764 2222233445788999
Q ss_pred EEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCC
Q 010774 316 FSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPL 395 (501)
Q Consensus 316 ~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~ 395 (501)
++++|++++.+++.. ..++ +++|.+++||+++
T Consensus 211 ~~~vP~~l~~l~~~~----------------------------------------~~~l--------~~l~~i~~gG~~l 242 (452)
T PRK07445 211 LSLVPTQLQRLLQLR----------------------------------------PQWL--------AQFRTILLGGAPA 242 (452)
T ss_pred EEehHHHHHHHHhhC----------------------------------------hhhh--------hcceEEEECCccC
Confidence 999999999886410 0112 2899999999999
Q ss_pred CHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCC
Q 010774 396 PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT 474 (501)
Q Consensus 396 ~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~ 474 (501)
++++.+.+++. ++.+++.||+||++..++....+. ....+++|+|+|+++++|++ ++.|||+|+|++
T Consensus 243 ~~~~~~~~~~~-~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~i~~-----------g~~Gel~v~g~~ 310 (452)
T PRK07445 243 WPSLLEQARQL-QLRLAPTYGMTETASQIATLKPDDFLAGNNSSGQVLPHAQITIPA-----------NQTGNITIQAQS 310 (452)
T ss_pred CHHHHHHHHhc-CCeEecCcchhhhcccccccCchhhccCCCcCCccCCCCeEEEcC-----------CCcceEEEeCCc
Confidence 99999988764 899999999999986554333222 23457899999999999972 268999999999
Q ss_pred ccccccCCcccchhhhccCcccCCCC
Q 010774 475 LFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 475 v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
++.||++++.. .+|||+|||.
T Consensus 311 ~~~gY~~~~~~-----~~g~~~TGDl 331 (452)
T PRK07445 311 LALGYYPQILD-----SQGIFETDDL 331 (452)
T ss_pred cchhhcCCccC-----CCCEEECCCE
Confidence 99999976431 4799999995
No 115
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4.6e-42 Score=342.91 Aligned_cols=399 Identities=19% Similarity=0.222 Sum_probs=316.0
Q ss_pred CCCCCCCHHHH-HHHHHHh-CCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH
Q 010774 38 SPAGLESPWQF-FCDSAKR-IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (501)
Q Consensus 38 ~~~~~~tl~~~-l~~~a~~-~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~ 115 (501)
++....++.+. ++++.+. .++.+++++. +..++....+||.|+.+++.++|..|.+.|+++||+|++++|+.+++
T Consensus 58 ~~g~~ln~~~n~~~~~~~~~~~~~~a~~~~---~~~~~~~~~~t~~el~~~v~~~a~~l~~~g~~kGD~V~~~mPm~~e~ 134 (626)
T KOG1175|consen 58 FPGAFLNACYNCLDRHIKEKGGDKVAIIFE---GNEGGDTEVWTYKELLDQVVRLANVLRKCGLKKGDTVAIYMPMIPEA 134 (626)
T ss_pred cccchhhhhHhhhhhhhhhcCCCCcEEEEE---ecCCCceEEEEHHHHHHHHHHHHHHHHhcCCCCCcEEEEeccCChHH
Confidence 33455666555 4444444 4889999988 54444445699999999999999999988999999999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc--------CCC----CccEEEEecCC
Q 010774 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR--------CCL----YLKTIVSFANV 183 (501)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~--------~~~----~~~~v~~~~~~ 183 (501)
++++|||+++|++..++-..+++.++...|+.++++++++.+............ ... .....+.+...
T Consensus 135 ~ia~lA~~r~Gai~~~v~~~fs~~~l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~ 214 (626)
T KOG1175|consen 135 VIAMLACARIGAIHSSVFAGFSAKELLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRR 214 (626)
T ss_pred HHHHHHHhhcCeEEEEeeccCCHHHHHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecc
Confidence 999999999999999999999999999999999999999988543322111100 000 00111111111
Q ss_pred ChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHh-hcceeeeecccc
Q 010774 184 SSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL-SVDQMFVVTGKV 262 (501)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~-~~~~~~~~~~~~ 262 (501)
. ....+++.+.......++...+.+++.+|+|||||||.||++++++...+.... .....+ .
T Consensus 215 ~------------~d~~~~~~~~~a~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~-----d 277 (626)
T KOG1175|consen 215 N------------RDLFWSLELKKASPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHF-----D 277 (626)
T ss_pred c------------ccccHHHHhhhcCCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceec-----c
Confidence 0 123455555555444557778889999999999999999999999886555544 444444 8
Q ss_pred CCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC---CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 263 CSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 263 ~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
++.+|++++...+.|+.+.++ .+.+|+.|+++++... ++..+++.+.++++|++++.|+.++.+.+..
T Consensus 278 ~q~~dv~~~~~d~GWi~g~~~~~~gpl~~Ga~~vl~~g~p~~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~-------- 349 (626)
T KOG1175|consen 278 LQPSDVLWCASDLGWITGHSYVLYGPLLNGATVVLYEGPPFDPGRIWKILDKYKVTVLYTAPTAYRLLRRLG-------- 349 (626)
T ss_pred CCCcceEEEecccCeeeccchhhhhhhhcCcEEEEEcCCCCChhhhhhhHhhcceEEEEeccHHHHHHHHhc--------
Confidence 899999999999999999997 7789999999999865 8899999999999999999999999876532
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCC-Ceeeeecc
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGL 417 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~-~l~~~yG~ 417 (501)
......++++ +||.+.++||+++++..+++.+.++. +|++.||+
T Consensus 350 ---------------------------~~~~~~~~~~--------sLk~~~S~Gepi~~~~~ew~~~~~~~~pv~e~~~q 394 (626)
T KOG1175|consen 350 ---------------------------QEDVTSYSLK--------SLRTCGSVGEPINPEAWEWWKRVTGLDPIYETYGQ 394 (626)
T ss_pred ---------------------------cccccccccc--------eEEEEeecCccCCcchHHHHHHhcCccchhhceee
Confidence 2222333222 89999999999999999999999987 69999999
Q ss_pred cccCcceecccCCC-CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec--C-CccccccCCcccchhhh---
Q 010774 418 TESCSGCFTSLADV-FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--N-TLFSGYYKRPDLTEEVI--- 490 (501)
Q Consensus 418 tE~~~~~~~~~~~~-~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g--~-~v~~gY~~~~~~~~~~~--- 490 (501)
||+|+.++...... ..++++.|.|.+|+.+.|.| ++|++++.+. +.|+|+++. | +.+++||+|++.-...+
T Consensus 395 tEtG~~~i~~~~g~~p~~pg~~~~p~~g~~v~i~d-e~g~~~~~~~-~~G~l~~~~~~P~~~~r~~~~n~erf~~~yf~k 472 (626)
T KOG1175|consen 395 TETGGICITPKPGKLPIKPGSAGKPFPGYDVQILD-ENGNELPPST-GNGELRLKPPWPPGMFRTLWGNHERFRAAYFKK 472 (626)
T ss_pred eccCceeeeccCCCCCcCccccCCCCCCcceEEEC-CCCCCcCCCC-ceeEEEEeCCCCccccccccCCHHHhhhhhccc
Confidence 99999988877776 67789999999999999999 8898887765 799999998 3 78999999998444443
Q ss_pred ccCcccCCCCC
Q 010774 491 VDGWFHTEVHR 501 (501)
Q Consensus 491 ~dgw~~TGD~~ 501 (501)
-.|+|.|||.+
T Consensus 473 ~pg~y~tGD~~ 483 (626)
T KOG1175|consen 473 FPGYYFTGDGG 483 (626)
T ss_pred CCceEEecCce
Confidence 37999999963
No 116
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=1.1e-41 Score=325.65 Aligned_cols=388 Identities=16% Similarity=0.156 Sum_probs=293.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|..+++++|+++|+++. +.. +++||+|+.++++++|+.|...|++.||.|+++|+|.+|++..+
T Consensus 74 r~~~ti~~~F~~~vrr~p~k~aii~~---~~~----~~~Tf~e~~~~s~~~A~~~~~~~l~~GD~VAL~men~pefv~lW 146 (649)
T KOG1179|consen 74 RERRTIAELFLSQVRRQPDKPAIIYE---GPF----QSLTFAELDARSNRVANYLHAEGLKAGDVVALLMENRPEFVALW 146 (649)
T ss_pred ccCCcHHHHHHHHHHhCCCccEEEEe---CCC----ceeeHHHHHHHHHHHHHHHHHhhcccCCEEEEecCCChhHHHHH
Confidence 45689999999999999999999997 432 58999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|+++++|++...||+++..+-+.+.++.++++++|++.+....+.+..+......-.++..+..... ....
T Consensus 147 lGLaKlGv~tA~iNtNlR~~~LlHsi~~s~aralv~~~el~~~~~e~~~~l~~~~i~~~~~~~~~~~---------~g~~ 217 (649)
T KOG1179|consen 147 LGLAKLGVITAFINTNLRGEPLLHSITVSGARALVVGPELLNALEEILPLLIKNGIHVFSLGPTSVP---------DGIE 217 (649)
T ss_pred HhHHhhCceeeeeccccccchhhhhhhhcCceEEEECHHHHHHHHhcchhhhhccceEEecCCCCCC---------chHH
Confidence 9999999999999999999999999999999999999998877766633332222333333322211 1122
Q ss_pred eHHHHHhcC-CCC---CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh
Q 010774 200 SWEEFLQLG-TLD---CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL 275 (501)
Q Consensus 200 ~~~~~~~~~-~~~---~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl 275 (501)
++...++.. ..+ ......+..++++++|||||||.||+++++|..++.....+...+ +++.+|+++..+|+
T Consensus 218 ~L~~~l~~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~-----g~~~~DvvY~~lPL 292 (649)
T KOG1179|consen 218 SLLAKLSAAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVF-----GMTADDVVYTTLPL 292 (649)
T ss_pred HHHHhhcccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHh-----CCCccceEEEcchh
Confidence 333333333 111 112334567889999999999999999999999888887666666 89999999999999
Q ss_pred HHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHh
Q 010774 276 AHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (501)
Q Consensus 276 ~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (501)
+|..|.+. +..+|..|+|+++-.. ++..+++.+.+|+||++...-.+++.|+++
T Consensus 293 YHsaa~ilGi~~~l~~GaT~VlrkKFSAS~FW~DC~k~~~Tv~QYIGElcRYLl~~------------------------ 348 (649)
T KOG1179|consen 293 YHSAAGILGIGGCLLHGATVVLRKKFSASNFWDDCRKYNVTVIQYIGELCRYLLNQ------------------------ 348 (649)
T ss_pred HHHHHHHHHHHHHHhcCceEEEecccchhhhHHHHHHhCCeeeehHHHHHHHHHcC------------------------
Confidence 99999886 8899999999999875 999999999999999999999999998862
Q ss_pred hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCC-eeeeecccccCcceecccCCCC
Q 010774 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LTQGYGLTESCSGCFTSLADVF 432 (501)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~-l~~~yG~tE~~~~~~~~~~~~~ 432 (501)
|......- +.+|.++ |.-+.+++.+.|.++||.. +.+.||+||...... + ..
T Consensus 349 -------------p~~~~er~--------HkVRla~--GNGLR~diW~~Fv~RFg~~~IgE~YgaTEgn~~~~-N---~d 401 (649)
T KOG1179|consen 349 -------------PPSPEERQ--------HKVRLAY--GNGLRPDIWQQFVKRFGIIKIGEFYGATEGNSNLV-N---YD 401 (649)
T ss_pred -------------CCChhhcC--------ceEEEEe--cCCCCchHHHHHHHHcCCCeEEEEeccccCcceee-e---ec
Confidence 22221111 3677665 6778899999999999875 999999999654322 2 23
Q ss_pred cccCccccc------ccCeEEEEeecCCCCc--------cCCCCCCCceEEEe--cCCc---cccccCCcccchhhh---
Q 010774 433 NMIGTVGVP------MTTVEARLESVPEMGY--------DALSSVPRGEICLR--GNTL---FSGYYKRPDLTEEVI--- 490 (501)
Q Consensus 433 ~~~~s~G~p------~p~~~i~I~d~~~~~~--------~~~~~~~~Gei~v~--g~~v---~~gY~~~~~~~~~~~--- 490 (501)
...|.+|+. +--.++.=+|..++++ .++.+||+|.++-+ ...- |.||.+..+.|++..
T Consensus 402 ~~vGA~G~~~~~~~~l~p~~LIk~D~~t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rD 481 (649)
T KOG1179|consen 402 GRVGACGFMSRLLKLLYPFRLIKVDPETGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRD 481 (649)
T ss_pred CccccccchhhhhhhccceEEEEecCCCCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHh
Confidence 334556542 1122222233133322 34556688865543 2233 899999777775543
Q ss_pred ----ccCcccCCC
Q 010774 491 ----VDGWFHTEV 499 (501)
Q Consensus 491 ----~dgw~~TGD 499 (501)
.|-||.|||
T Consensus 482 VFkkGD~~f~tGD 494 (649)
T KOG1179|consen 482 VFKKGDVYFNTGD 494 (649)
T ss_pred hhccCcEEEeeCc
Confidence 345999998
No 117
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=4.6e-42 Score=354.19 Aligned_cols=335 Identities=17% Similarity=0.110 Sum_probs=242.5
Q ss_pred cCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh------hhhhhcCccCCCCccEEEEecC
Q 010774 109 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI------PSILSCLPRCCLYLKTIVSFAN 182 (501)
Q Consensus 109 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~------~~~~~~~~~~~~~~~~v~~~~~ 182 (501)
++|++++++++|||+++|++++|+++.++.+++.++|+.++++++|+++... +.+...... .....++....
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~el~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~--~~~~~i~~~~~ 78 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKEIATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEA--APAKAIVLPAA 78 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHhcCceEEEecCceeeCCeeecchhhhhhc--ccceEEEEecc
Confidence 5899999999999999999999999999999999999999999999986431 111111110 11122222111
Q ss_pred CChhhHHHhhhcCceEeeHHHHHhcCC-----C--CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhccee
Q 010774 183 VSSSQKKEAEELGVSCFSWEEFLQLGT-----L--DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM 255 (501)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~ 255 (501)
..... . ........+++++.... . .......+++++++|+|||||||.||||++||.+++.........
T Consensus 79 ~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~ 154 (499)
T PLN03051 79 GEPVA-V---PLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWAH 154 (499)
T ss_pred CcccC-C---ccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHHh
Confidence 10000 0 00001224555542110 0 111112346889999999999999999999999988766544333
Q ss_pred eeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHH
Q 010774 256 FVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNK 333 (501)
Q Consensus 256 ~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~ 333 (501)
+ .+..+|++++.+|++|.+++..++.+++.|+++++.+. ++..+++.|+++++|+++++|++++.+++..
T Consensus 155 ~-----~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~--- 226 (499)
T PLN03051 155 M-----DIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYGGAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTG--- 226 (499)
T ss_pred c-----CCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecCCCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcC---
Confidence 3 67788999999999999997778889999999998863 7889999999999999999999999886521
Q ss_pred hhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh--CCCe
Q 010774 334 ISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPL 411 (501)
Q Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~--~~~l 411 (501)
.......+++ +||.+++||+++++++.+++++.+ ++.+
T Consensus 227 --------------------------------~~~~~~~~~~--------~Lr~i~~gG~~~~~~~~~~~~~~~~~~~~~ 266 (499)
T PLN03051 227 --------------------------------AFAMEGLDWS--------KLRVFASTGEASAVDDVLWLSSVRGYYKPV 266 (499)
T ss_pred --------------------------------ccccccCCch--------hheEEEecCCCCCHHHHHHHHHhcccccee
Confidence 0001122233 899999999999999998887733 4789
Q ss_pred eeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCc--cccccCCcccchhh
Q 010774 412 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL--FSGYYKRPDLTEEV 489 (501)
Q Consensus 412 ~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v--~~gY~~~~~~~~~~ 489 (501)
++.||+||++..++..........+++|+|.+|++++|+| +++++++.|.+++|||+|+||.+ +.|||+++ .++ .
T Consensus 267 ~~~YG~TE~~~~~~~~~~~~~~~~~~~G~p~~~~~~~ivd-~~g~~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~-~ 343 (499)
T PLN03051 267 IEYCGGTELASGYISSTLLQPQAPGAFSTASLGTRFVLLN-DNGVPYPDDQPCVGEVALAPPMLGASDRLLNAD-HDK-V 343 (499)
T ss_pred EeeeccccccceeecccccCCCCCccccCCCCCceEEEEC-CCCCCCCCCCCcceEEEEecCcCCCCccccCCc-ccc-e
Confidence 9999999987544433222233458999999999999999 88988877644689999999976 58999765 333 3
Q ss_pred hccC----------cccCCCC
Q 010774 490 IVDG----------WFHTEVH 500 (501)
Q Consensus 490 ~~dg----------w~~TGD~ 500 (501)
+.+| ||+|||.
T Consensus 344 ~~~g~~~~~~~~~~~~~TGDl 364 (499)
T PLN03051 344 YYKGMPMYGSKGMPLRRHGDI 364 (499)
T ss_pred eeecCCccccCCcceeecCCe
Confidence 3344 6899995
No 118
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.6e-41 Score=369.00 Aligned_cols=378 Identities=15% Similarity=0.146 Sum_probs=268.3
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.+.|.++++.+|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+|+++|++++++++
T Consensus 444 ~~~~sl~~ll~~~a~~~pd~~Al~~~---~------~~lTY~eL~~ra~rlA~~L~~~Gv~~Gd~VaI~~~n~~e~v~a~ 514 (994)
T PRK07868 444 HTRISLGRIIAEQARDAPKGEFLLFD---G------RVHTYEAVNRRINNVVRGLIAVGVRQGDRVGVLMETRPSALVAI 514 (994)
T ss_pred CCCccHHHHHHHHHHHCCCCeEEEeC---C------ceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34467999999999999999999875 3 47999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++|++|. .++.++++.++++++|++.+....+... ...+++++.......... ......
T Consensus 515 lA~~~aGav~vpl~p~---~~l~~il~~s~~~~li~~~~~~~~~~~~-------~~~iiv~~~~~~~~~~~~--~~~~~~ 582 (994)
T PRK07868 515 AALSRLGAVAVLMPPD---TDLAAAVRLGGVTEIITDPTNLEAARQL-------PGRVLVLGGGESRDLDLP--DDADVI 582 (994)
T ss_pred HHHHhcCCEEEEeCCc---hhHHHHHhccCCeEEEEChHHHHHHHhc-------CceEEEecCCccccccCC--cchhhh
Confidence 9999999999999984 6899999999999999987766544221 134444432111000000 000011
Q ss_pred eHHHHHhcCCC-C--CCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 200 SWEEFLQLGTL-D--CELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 200 ~~~~~~~~~~~-~--~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
.++++...... + ....+..++++++|+|| ||||.||++.++|.+...........+ .+..+|++++.+|++
T Consensus 583 ~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~-----~l~~~d~~L~~~Pl~ 656 (994)
T PRK07868 583 DMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAA-----ALDRRDTVYCLTPLH 656 (994)
T ss_pred hhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhc-----CCCCCCeEEEecChH
Confidence 11111110000 0 01112235789999998 577778888888877655444433333 678899999999999
Q ss_pred HHHHHHHHH-HHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 277 HIYDQIIET-HCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 277 ~~~g~~~~~-~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
|.+++...+ .++..|+++++.+. ++..+++.|+++++|+++++|++++.+++..
T Consensus 657 h~~gl~~~l~~~l~gG~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~------------------------ 712 (994)
T PRK07868 657 HESGLLVSLGGAVVGGSRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVDDP------------------------ 712 (994)
T ss_pred HHhHHHHHHHHHhccceEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCc------------------------
Confidence 999998644 55666666666554 9999999999999999999999999887520
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC-CCeeeeecccccCcceecccCCCCc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG-APLTQGYGLTESCSGCFTSLADVFN 433 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~l~~~yG~tE~~~~~~~~~~~~~~ 433 (501)
.....++ +++|.++ |+.+++++.+++.+.++ +.+++.||+||++.++. .. ...
T Consensus 713 -------------~~~~~~~--------~slr~~~--g~gl~~~l~~~~~~~~~~~~l~~~YG~TE~~~~~~-~~--~~~ 766 (994)
T PRK07868 713 -------------AFVLHGN--------HPVRLFI--GSGMPTGLWERVVEAFAPAHVVEFFATTDGQAVLA-NV--SGA 766 (994)
T ss_pred -------------CCccCCC--------CceEEEe--cCCCCHHHHHHHHHHhCchheeeeeeccccccccc-cc--CCC
Confidence 0000111 3788766 34499999999999886 78999999999875433 21 123
Q ss_pred ccCcccccccCe-EEEEe-----------ecCCCCccCCCCCCCceEEEecCCccccccCCcccc--hhhh--ccCcccC
Q 010774 434 MIGTVGVPMTTV-EARLE-----------SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLT--EEVI--VDGWFHT 497 (501)
Q Consensus 434 ~~~s~G~p~p~~-~i~I~-----------d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~--~~~~--~dgw~~T 497 (501)
+++++|+|+||+ +++|. | ++|....+..++.|||+++|+.. + +|+.+ +..| .||||+|
T Consensus 767 ~~~svG~p~pg~~~v~i~~~d~~~g~li~d-~~G~~~~~~~ge~Gel~~~~~~~----~-~p~~t~~~~~~~~~dgw~~T 840 (994)
T PRK07868 767 KIGSKGRPLPGAGRVELAAYDPEHDLILED-DRGFVRRAEVNEVGVLLARARGP----I-DPTASVKRGVFAPADTWIST 840 (994)
T ss_pred CCcccCCccCCCCceeEEEecCcCCceeec-CCceEEEcCCCCceEEEEecCCC----C-ChhhhhHhcccccCCEEEec
Confidence 458999999998 77764 3 33411122345899999999864 3 34332 2223 3799999
Q ss_pred CCC
Q 010774 498 EVH 500 (501)
Q Consensus 498 GD~ 500 (501)
||.
T Consensus 841 GDl 843 (994)
T PRK07868 841 EYL 843 (994)
T ss_pred cce
Confidence 995
No 119
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.9e-38 Score=318.55 Aligned_cols=290 Identities=17% Similarity=0.176 Sum_probs=243.2
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
+.+||+||.++++++|+.|. .|+++|++|+++++|+++++++++|++++|++++|+++..+.+++..+++.++++.+++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~~~~~~~~~~~~~~i~ 85 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-FQEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEAAIRMAKRAGCHGLLY 85 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-cCCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHHHHHHHHhCCCCEEEe
Confidence 48999999999999999985 68999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 010774 156 QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEP 235 (501)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~P 235 (501)
++.... .. ......++++++++|||||||.|
T Consensus 86 ~~~~~~------------------~~-------------------------------~~~~~~~~~~~~i~~TSGtTG~P 116 (414)
T PRK08308 86 GESDFT------------------KL-------------------------------EAVNYLAEEPSLLQYSSGTTGEP 116 (414)
T ss_pred cCcccc------------------cc-------------------------------cCCCCCCCCceEEEECCCCCCCC
Confidence 663110 00 00112457889999999999999
Q ss_pred ceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcC
Q 010774 236 KGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKP 313 (501)
Q Consensus 236 K~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~ 313 (501)
|+|.+||.++.+.+..+...+ ....+|+++..+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++
T Consensus 117 Kgv~~s~~~l~~~~~~~~~~~-----~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~l~~~~~ 191 (414)
T PRK08308 117 KLIRRSWTEIDREIEAYNEAL-----NCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITNKNPKFALNILRNTPQ 191 (414)
T ss_pred cEEEEehHhHHHHHHHHHHhh-----CCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCCCCHHHHHHHHHHhCC
Confidence 999999999998888766655 6778899999999999999875 7889999999988875 99999999999999
Q ss_pred cEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecC
Q 010774 314 TMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAA 393 (501)
Q Consensus 314 t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~ 393 (501)
|.++++|.++..+.+... .. .+++.+++||+
T Consensus 192 t~~~~~P~~~~~l~~~~~--------------------------------------~~-----------~~l~~~~~~G~ 222 (414)
T PRK08308 192 HILYAVPLMLHILGRLLP--------------------------------------GT-----------FQFHAVMTSGT 222 (414)
T ss_pred eEEEcCHHHHHHHHhcCC--------------------------------------cc-----------ccccEEEEccC
Confidence 999999999998865210 00 16788999999
Q ss_pred CCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecC
Q 010774 394 PLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGN 473 (501)
Q Consensus 394 ~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~ 473 (501)
++++++.+++++. +.++++.||+||++.+.... ....++++|+|+|++++++.+ ++ ++.|||++++.
T Consensus 223 ~l~~~~~~~~~~~-~~~~~~~YG~tE~~~~~~~~---~~~~~~~~G~p~~~~~~~~~~-~~--------~~~gel~v~~~ 289 (414)
T PRK08308 223 PLPEAWFYKLRER-TTYMMQQYGCSEAGCVSICP---DMKSHLDLGNPLPHVSVSAGS-DE--------NAPEEIVVKMG 289 (414)
T ss_pred CCCHHHHHHHHHh-CChhhhccCccccCCeeecC---CCCCCCccCccCCCeEEEEec-CC--------CCCceEEEEcC
Confidence 9999999999886 67899999999998544321 123457899999999999976 32 25799999752
Q ss_pred CccccccCCcccchhhhccCcccCCCC
Q 010774 474 TLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 474 ~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
++||+|||.
T Consensus 290 ------------------~~~~~TGDl 298 (414)
T PRK08308 290 ------------------DKEIFTKDL 298 (414)
T ss_pred ------------------CceEECCce
Confidence 578999985
No 120
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.5e-33 Score=300.15 Aligned_cols=370 Identities=22% Similarity=0.257 Sum_probs=297.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.+.+...|++.|+++. + ..+||+|+..+++++|+.|.+.|+.++++|+++++.+.++++.++|
T Consensus 226 ~~~i~~~f~~~a~~~p~~~a~~~~---~------~~lty~el~~~a~~la~~l~~~g~~~~~~V~i~~~rs~~~i~~~l~ 296 (642)
T COG1020 226 RLTIHLLFEEQAATTPDAVALVRG---G------QQLTYAELDARANRLARLLISLGVGPGETVAILADRSLELVVALLA 296 (642)
T ss_pred cchHHHHHHHHHHhCCCceeEecC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCeEEEEcCCCHHHHHHHHH
Confidence 367999999999999999998764 2 4799999999999999999999999999999999889999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
++++|+.++|++|.++.+++.++++.++++.+++.......... . .. +.++... .
T Consensus 297 ilkaG~~yvP~d~~~P~~r~~~~l~~~~~~~~~~~~~~~~~~~~-~-------~~-~~~~~~~----------------~ 351 (642)
T COG1020 297 VLKAGAAYVPLDPLYPAERLAYILEDSRPTLLLTQAHLRVDDVG-L-------PG-LALDDAL----------------S 351 (642)
T ss_pred HHhcCCeEecCCCCChHHHHHHHHhhcCccEEEecccccccccc-C-------Cc-ccccccc----------------c
Confidence 99999999999999999999999999999999998332221100 0 00 1111000 0
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
. .............++.+|++|||||||.||||..+|+++.+.+.++...+ .....|+++...++.+....
T Consensus 352 ~----~~~~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~-----~~~~~d~~l~~~s~~fD~~~ 422 (642)
T COG1020 352 E----IPDTDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARF-----GLDADDRVLALASLSFDASV 422 (642)
T ss_pred c----CCccCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhc-----CCCcccEEeecCCcccchhH
Confidence 0 00001111233458899999999999999999999999999888876666 78889999999999888887
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.++..|+++++... ++..+.+.+.++++|++..+|.++..++........
T Consensus 423 ~~~f~~l~~G~~l~~~~~~~~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~~---------------------- 480 (642)
T COG1020 423 FEIFGALLEGARLVLAPALLQVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPDL---------------------- 480 (642)
T ss_pred HHHHHHHhCCCEEEecCccccCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhccc----------------------
Confidence 789999999999998864 899999999999999999999999988752000000
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh--CCCeeeeecccccCcceecccCCCCcc-
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS--GAPLTQGYGLTESCSGCFTSLADVFNM- 434 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~--~~~l~~~yG~tE~~~~~~~~~~~~~~~- 434 (501)
.. ..+.+|.+++||+.++..+.+.+.... ...+.+.||+||+..............
T Consensus 481 ----------------~~-----~~~~lr~~~~gGe~l~~~~~~~~~~~~~~~~~l~~~ygpTe~~~~~~~~~~~~~~~~ 539 (642)
T COG1020 481 ----------------IS-----PCERLRQLLSGGEALPLALVQRLLQLAALARRLLNLYGPTEATLDAPSFPISAELES 539 (642)
T ss_pred ----------------cC-----CcccccEEEEcCCCCCHHHHHHHHHhccccceEeeccCccHHhhheeeEEcccccCC
Confidence 00 002489999999999999999888765 468999999999766554433322211
Q ss_pred cCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhcc-CcccCCCC
Q 010774 435 IGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD-GWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~d-gw~~TGD~ 500 (501)
...+|+|++|+.+.|.| ...+.+|.+ ..||+++.|.++..||+++++.|.+.|.. .+|+|||.
T Consensus 540 ~~piG~p~~n~~~~ild-~~~~~~p~g--v~gel~i~g~~~a~gy~~~p~lt~~~f~~~~~y~tgD~ 603 (642)
T COG1020 540 RVPIGRPVANTQLYILD-QGLRPLPLG--VPGELYIAGLGLALGYLNRPDLTAERFIALRLYRTGDL 603 (642)
T ss_pred CCCcceeeCCCeEEEEC-CCCCcCCCC--CCeeeEECCcchhhhhcCChhhhHHHhhhccCccCCCe
Confidence 36799999999999999 888888887 78999999999999999999999999944 59999995
No 121
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.96 E-value=1.9e-27 Score=242.01 Aligned_cols=399 Identities=11% Similarity=0.071 Sum_probs=283.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
.++.|+|+.+++.+|+.+|+... +..+....++||.+|+.++.+++.+|... -+++||+|++++++++|++++++|
T Consensus 770 ~~ile~Lq~R~a~tp~~~a~~~~---n~~~~~~~~~Tw~~f~krva~i~~~l~~k~~lk~Gd~V~Lmy~~sie~vaa~~~ 846 (1363)
T KOG3628|consen 770 LTILEILQWRAAKTPDHIAFTTL---NARGATKKTLTWAQFHKRVARIAEYLQDKGHLKAGDHVVLMYPPSIEFVAAIYA 846 (1363)
T ss_pred HHHHHHHHHHhhcCCCceEEEEe---ccCCcccceeEHHHHHHHHHHHHHHHHhcccCCCCCeEEEEcCChHHHHHHHHH
Confidence 68999999999999999999988 77777778999999999999999999976 489999999999999999999999
Q ss_pred HHhcCCEEEEecCCC------CHHHHHHHHHhcCceEEEEcCCChhhhhhcCccC---CCCccEEEEecCCChhhHHHhh
Q 010774 122 CNSQAITYVPLYDTL------GANAVEFIINHAEVSIAFVQENKIPSILSCLPRC---CLYLKTIVSFANVSSSQKKEAE 192 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~------~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~---~~~~~~v~~~~~~~~~~~~~~~ 192 (501)
|+.+|.+++|+.|.- ....+..+++.+++++|+++......+...-... ...+..++.+.+......
T Consensus 847 Cly~GliPIpv~p~~~s~l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i~~~~~~~~t~~---- 922 (1363)
T KOG3628|consen 847 CLYLGLIPIPVPPPHASNLIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLILVLPKLPETIR---- 922 (1363)
T ss_pred HHhcCeeeeccCCccHHhhhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhhhcccccchhhh----
Confidence 999999999998753 4457888999999999999987554432211100 011222323332221000
Q ss_pred hcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEe
Q 010774 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (501)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (501)
.......+. ....++...+.+.+|++.|.--++|.--++.++|.++++.++.....+ .+.++.-++..
T Consensus 923 ------k~~~~~~k~-~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~-----~l~~~rpl~~~ 990 (1363)
T KOG3628|consen 923 ------KRKKNIKKL-NTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETC-----QLYKSRPLLGC 990 (1363)
T ss_pred ------hhhhhhhcc-CCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHH-----ccccCCceEEE
Confidence 001111111 112223334678899999999999999999999999999999988877 55555556666
Q ss_pred cChHHHHHHH-HHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHH
Q 010774 273 LPLAHIYDQI-IETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFE 346 (501)
Q Consensus 273 ~pl~~~~g~~-~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~ 346 (501)
.+.+...|+. +++..++.|.+.++++. ++..|++.+.++|+.-++.+-..++.+.++++...+...
T Consensus 991 ~~~~sGlgf~~wcLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~-------- 1062 (1363)
T KOG3628|consen 991 SSPYSGLGFNHWCLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLS-------- 1062 (1363)
T ss_pred ecCccchhHHHHHHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhh--------
Confidence 6666666666 69999999999888765 999999999999999999999999888775544322111
Q ss_pred HHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh---CC---Ceeeeeccccc
Q 010774 347 FAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS---GA---PLTQGYGLTES 420 (501)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~---~~---~l~~~yG~tE~ 420 (501)
...+++ +-..++..-+.....+.+.|.+.| |. .+...|++---
T Consensus 1063 ----------------------~~gnn~---------s~s~vv~~~~RPr~ali~sf~klfa~igLsp~avStsys~r~N 1111 (1363)
T KOG3628|consen 1063 ----------------------KRGNNT---------SSSIVVPAEERPRIALIASFKKLFAAIGLSPRAVSTSYSSRVN 1111 (1363)
T ss_pred ----------------------hhhccc---------ccceeeecCCccHHHHHHHHHHHHHHcCCChhhhcccccccCC
Confidence 111111 125566666777777888777776 22 35556665544
Q ss_pred CcceecccCCCC--------------------------cccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCC
Q 010774 421 CSGCFTSLADVF--------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNT 474 (501)
Q Consensus 421 ~~~~~~~~~~~~--------------------------~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~ 474 (501)
-.+|..+..+.+ -.....|+..+++++.|++ |+++ .|+..++.||||++|++
T Consensus 1112 p~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~~~i~Ivn-PEtk-~pc~dge~GEIW~~S~h 1189 (1363)
T KOG3628|consen 1112 PFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVYTDIAIVN-PETK-GPCRDGELGEIWVNSAH 1189 (1363)
T ss_pred hHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCcccccceeEEeC-Cccc-cccccCCcceEEecccc
Confidence 334333211110 0011258888999999999 7766 67777799999999999
Q ss_pred ccccccCCccc-chhhh----------ccCcccCCCCC
Q 010774 475 LFSGYYKRPDL-TEEVI----------VDGWFHTEVHR 501 (501)
Q Consensus 475 v~~gY~~~~~~-~~~~~----------~dgw~~TGD~~ 501 (501)
-+.+|++..+. ....| ..+|-||||-+
T Consensus 1190 nA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LG 1227 (1363)
T KOG3628|consen 1190 NASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLG 1227 (1363)
T ss_pred ccccccccCchhhhhhhhhhccccccccccceeeeeee
Confidence 98888764322 22222 12599999853
No 122
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=99.95 E-value=8.6e-27 Score=230.41 Aligned_cols=203 Identities=28% Similarity=0.420 Sum_probs=163.7
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010774 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (501)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~ 296 (501)
..++++++++|||||||.||+|.++|.++..........+ ...++++..+|++|.+++..++.+++.|+++++
T Consensus 32 ~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~-------~~~~~~~~~~p~~~~~g~~~~~~~l~~g~~~v~ 104 (358)
T PRK07824 32 PIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL-------GGPGQWLLALPAHHIAGLQVLVRSVIAGSEPVE 104 (358)
T ss_pred CCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc-------CCCCeEEEECChHHHHHHHHHHHHHHcCCeEEe
Confidence 3468899999999999999999999999998887654433 345688999999999998888889999999887
Q ss_pred ec----CCHHHHHHHHhhhc--CcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHH
Q 010774 297 WR----GDVRYLMEDIQELK--PTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLD 370 (501)
Q Consensus 297 ~~----~~~~~~~~~i~~~~--~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 370 (501)
.. .++..+++.+++++ .++...+|..+..++... . .
T Consensus 105 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~-------------------------------------~-~ 146 (358)
T PRK07824 105 LDVSAGFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDP-------------------------------------A-A 146 (358)
T ss_pred cCcCCCcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCc-------------------------------------c-c
Confidence 32 28999999999998 456667887776654310 0 0
Q ss_pred HHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEe
Q 010774 371 SLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLE 450 (501)
Q Consensus 371 ~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~ 450 (501)
..++ .++|.+++||+++++++.+++.+. ++.+++.||+||++..+. ..|+|+++++++|.
T Consensus 147 ~~~~--------~~l~~i~~gG~~l~~~~~~~~~~~-~~~v~~~YG~TE~~~~~~-----------~~G~~~~g~~v~i~ 206 (358)
T PRK07824 147 TAAL--------AELDAVLVGGGPAPAPVLDAAAAA-GINVVRTYGMSETSGGCV-----------YDGVPLDGVRVRVE 206 (358)
T ss_pred cCCc--------ccceEEEECCCCCCHHHHHHHHhc-CCcEEecccCCccCCCcC-----------cCceeCCCCEEEec
Confidence 0011 389999999999999999998864 999999999999876442 35899999999984
Q ss_pred ecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 451 SVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 451 d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
+ |||+++|+.++.||+++++.+ .+ .+|||+|||.
T Consensus 207 ~--------------Gei~v~g~~~~~gY~~~~~~~--~~~~~g~~~TGDl 241 (358)
T PRK07824 207 D--------------GRIALGGPTLAKGYRNPVDPD--PFAEPGWFRTDDL 241 (358)
T ss_pred C--------------CEEEEecCccccccCCCcccc--cccCCCceecccE
Confidence 4 999999999999999988743 34 6789999995
No 123
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.95 E-value=5e-26 Score=207.82 Aligned_cols=222 Identities=13% Similarity=0.069 Sum_probs=163.5
Q ss_pred HHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhHHHHHHHHHhcCC
Q 010774 49 FCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (501)
Q Consensus 49 l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 127 (501)
|...++.+|+++|+++. ++.++..+.+||+||.++++++|++|++ .|+++||+|+|+++|+++++++++||+++|+
T Consensus 2 ~~~~~~~~p~~~al~~~---~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~Gv~~GdrV~i~~~n~~~~~~~~~a~~~~G~ 78 (227)
T TIGR03089 2 LSPLLAADPASPRLTFY---DDATGERVELSAATLANWVAKTANLLQDELDAEPGSRVALDLPAHWQTAVWLLAAWSTGV 78 (227)
T ss_pred hhhhhhhCCCCcEEEEE---cCCCCeeEEEEHHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 56788899999999865 3322123579999999999999999998 7999999999999999999999999999999
Q ss_pred EEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHhc
Q 010774 128 TYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQL 207 (501)
Q Consensus 128 ~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (501)
+++|+| .+++++++++.+....+. . . +.++.+......... ..........+.+.+..
T Consensus 79 v~vp~n-------------~s~a~~~v~~~~~~~~~~-~-----~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 136 (227)
T TIGR03089 79 EVVLAG-------------DPDADVVVTGPDRLAAAA-G-----S--GEVVALSLDPLGRRV-AGELPPGVIDFAPEVRV 136 (227)
T ss_pred EEEeCC-------------CCCCCEEEeCcchhhhcc-c-----C--CceEEEeccccccCC-CCCCCCcccchhhhhhc
Confidence 999995 689999999987766542 1 1 222222110000000 00001122355555543
Q ss_pred CCCCCCCC-CCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HH
Q 010774 208 GTLDCELP-PKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ET 285 (501)
Q Consensus 208 ~~~~~~~~-~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~ 285 (501)
........ ...++++++|+||||+ +|.+++... ..+ ++..+|+++ .+|++|.+|+.. ++
T Consensus 137 ~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~-----~l~~~D~~l-~~Pl~H~~gl~~~~~ 197 (227)
T TIGR03089 137 HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAA-----GLPPGDRVL-VLAWTDLEDFLATLL 197 (227)
T ss_pred cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhc-----CCCCCCeEE-ecCCCchHHHHHHHH
Confidence 32222222 3456899999999985 566655554 222 678899999 999999999975 88
Q ss_pred HHHhcCcEEEEec-CCHHHHHHHHhhhcCc
Q 010774 286 HCIHKGCSIGFWR-GDVRYLMEDIQELKPT 314 (501)
Q Consensus 286 ~~l~~G~~~~~~~-~~~~~~~~~i~~~~~t 314 (501)
.+|+.|+++++.+ +++..+++.|+++|||
T Consensus 198 ~~l~~G~t~v~~~rFd~~~~l~~i~~~~vT 227 (227)
T TIGR03089 198 APLAAGGSLVLVTHPDPARLDQIAETERVT 227 (227)
T ss_pred HHhccCceEEEecCCCHHHHHHHHHhhcCC
Confidence 9999999998886 4999999999999997
No 124
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.90 E-value=1.2e-22 Score=205.11 Aligned_cols=219 Identities=17% Similarity=0.142 Sum_probs=157.6
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcEEEE
Q 010774 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCSIGF 296 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~-~~~~~l~~G~~~~~ 296 (501)
+.++++.+++||||||.||++.++|.++......+...+ ...+...+|++++..++.+..+.. ..+.++..|++++.
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~--~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 150 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSI--RAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVP 150 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHH--HHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEe
Confidence 456788899999999999999999999876543322211 112567889988876654433333 35567888999887
Q ss_pred ecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHH
Q 010774 297 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (501)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (501)
.+. ++..+++.|+++++|+++++|+++..|++.+........ .
T Consensus 151 ~~~~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~~~~-----------------------------------~- 194 (422)
T TIGR02155 151 ISGGQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGIDPA-----------------------------------Q- 194 (422)
T ss_pred cCCCCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCCCcc-----------------------------------c-
Confidence 654 789999999999999999999999998865432110000 0
Q ss_pred HHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcc-eecccCCCCcccCcccccc--cCeEEEEeec
Q 010774 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNMIGTVGVPM--TTVEARLESV 452 (501)
Q Consensus 376 ~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~-~~~~~~~~~~~~~s~G~p~--p~~~i~I~d~ 452 (501)
.++|.+++||+++++++.+.+++.||+.+++.||+||+++. +...... ...|.++ +++.++|+|.
T Consensus 195 -------~~lr~i~~~ge~l~~~~~~~i~~~~g~~v~~~YG~tE~~~~~~~~~~~~-----~~~g~~~~~~~~~~eivd~ 262 (422)
T TIGR02155 195 -------TSLQVGIFGAEPWTNAMRKEIEARLGMKATDIYGLSEVIGPGVAMECVE-----TQDGLHIWEDHFYPEIIDP 262 (422)
T ss_pred -------CceEEEEEeCCcCCHHHHHHHHHHhCCceEecccchhhcCCceeecccc-----cCCCceEecCeeEEEEECC
Confidence 27999999999999999999999999999999999998532 2221111 1123343 3578889993
Q ss_pred CCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 453 ~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++.+++.| +.|||++++. +...+..+||+|||.
T Consensus 263 ~~g~~v~~G--e~Gelvvt~~------------~~~~~p~~ry~TGDl 296 (422)
T TIGR02155 263 HTGEVLPDG--EEGELVFTTL------------TKEALPVIRYRTRDL 296 (422)
T ss_pred CCCCCCCCC--CeeEEEEecC------------CccccceeeEEcCcE
Confidence 466666655 8999999873 234456789999994
No 125
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.82 E-value=1.3e-19 Score=178.74 Aligned_cols=166 Identities=17% Similarity=0.175 Sum_probs=130.1
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC--CCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEE
Q 010774 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGF 296 (501)
Q Consensus 220 ~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~ 296 (501)
+..++++|||||||.||+|.+||+++.+....+...+ +. ...+++++.+|++|.+|+.+ ++.++..|+++++
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~ 169 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKIL-----GERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQ 169 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHh-----CcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEe
Confidence 4568999999999999999999999998887766554 33 34468999999999999865 7788999999988
Q ss_pred ecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHH
Q 010774 297 WRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (501)
Q Consensus 297 ~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (501)
.+. ++..+++.++.+ |+++++|.+++.+++.. .++
T Consensus 170 ~~~~~~~~~l~~i~~~--t~~~~~P~~l~~l~~~~-----------------------------------------~~l- 205 (386)
T TIGR02372 170 LAAAPASGIMRHARPG--DLIVGTPFIWEQLADLD-----------------------------------------YRL- 205 (386)
T ss_pred cCCCChHHHHHhhccC--CEEEECcHHHHHHHhhC-----------------------------------------cCC-
Confidence 764 777888877643 89999999999886410 011
Q ss_pred HHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCC-CeeeeecccccCcceecccCCCCcccCcccccccCeEEEE
Q 010774 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGA-PLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARL 449 (501)
Q Consensus 376 ~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~-~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I 449 (501)
++++. ++||+++++++.+.+++. +. .+++.||+||++++++... ++..|+++|++++++
T Consensus 206 -------~slr~-i~gGa~l~~~l~~~~~~~-g~~~v~~~YG~TEt~~i~~~~~------~~~~~~~~p~~~~~~ 265 (386)
T TIGR02372 206 -------PGVVG-VSSGAPSTAATWRCLLAA-GLARLLEVYGATETGGIGLREA------PDDPFRLLPDLACFA 265 (386)
T ss_pred -------Cccee-EecCCCCCHHHHHHHHHh-cccchhheeccccccccccccC------CCCCcccCCCccccC
Confidence 25665 688999999999999886 64 6999999999987654321 244678889887765
No 126
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.80 E-value=2.3e-18 Score=174.13 Aligned_cols=201 Identities=17% Similarity=0.139 Sum_probs=146.8
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEE
Q 010774 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIG 295 (501)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~ 295 (501)
.+.++++.+.+||||||.||+|.+||.++......+...+. ..++..+|+++...|+.+..+... .+.+...|++++
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~--~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi 160 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFV--SQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSII 160 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHH--HcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEE
Confidence 34577889999999999999999999998776654433211 126778899999988877655543 566788888765
Q ss_pred EecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHH
Q 010774 296 FWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFS 375 (501)
Q Consensus 296 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 375 (501)
.. ......++.++++++|.+.++|..+..+++.+....... ..
T Consensus 161 ~~-~~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~~-----------------------------------~~- 203 (445)
T TIGR03335 161 PE-GKCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGIDP-----------------------------------AE- 203 (445)
T ss_pred cC-CchhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCc-----------------------------------cc-
Confidence 33 344567899999999999999998887776433211000 00
Q ss_pred HHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccc--cCeEEEEeecC
Q 010774 376 KIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPM--TTVEARLESVP 453 (501)
Q Consensus 376 ~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~--p~~~i~I~d~~ 453 (501)
.++|.+++||+++++++.+.+.+.+|+.+++.||+||++..+.+.. ..|..+ +.+.++|+| +
T Consensus 204 -------~~lr~ii~gGE~l~~~~r~~ie~~~g~~v~~~YG~TE~~~~~~c~~--------~~g~h~~~d~~~vEIvD-p 267 (445)
T TIGR03335 204 -------SSIRRLVVGGESFADESRNYVEELWGCEVYNTYGSTEGTMCGECQA--------VAGLHVPEDLVHLDVYD-P 267 (445)
T ss_pred -------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEecCChhhhhheEEecC--------CCCccccCCceEEEEEc-C
Confidence 2799999999999999999999989999999999999863322211 123333 457899999 6
Q ss_pred CCC-ccCCCCCCCceEEEecCC
Q 010774 454 EMG-YDALSSVPRGEICLRGNT 474 (501)
Q Consensus 454 ~~~-~~~~~~~~~Gei~v~g~~ 474 (501)
++. +++.| +.|||++++-.
T Consensus 268 ~~~~~vp~G--e~GELvvT~L~ 287 (445)
T TIGR03335 268 RHQRFLPDG--ECGRIVLTTLL 287 (445)
T ss_pred CCCCCCcCC--CceEEEEEecC
Confidence 655 35544 99999998753
No 127
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.72 E-value=2e-16 Score=167.27 Aligned_cols=325 Identities=15% Similarity=0.091 Sum_probs=210.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++...+.+.+...|..++..+.+. ....+.....||++....++.+++.|...|...|+.|++++..+.++++..++
T Consensus 35 ~g~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~i~~~t~r~~~~~~n~~~q~l~~~~~~~~~~v~i~~~~~~d~~v~v~~ 113 (1032)
T KOG1178|consen 35 MGTLEDSFRRELAEAPENTGHVIIPT-ASESGIIDSFTYRLIRLLSNIIAQFLVSLGSLRGTTVAIYMLPSVDLVVSVFA 113 (1032)
T ss_pred hcchhhHHHHHHhhcccCCCceEeec-ccccccccchhhhhhhcccchhHHHhhhcccccCceEEEeccCcCCeeeeeee
Confidence 34667788999999999998877633 23344556899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCC----HHHHHH---HHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 122 CNSQAITYVPLYDTLG----ANAVEF---IINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~----~~~l~~---~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
.+++|..+++++|.++ ++++.. .+......+ ... .+......... ..-..+
T Consensus 114 ~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i--~~~--l~i~~~~~~~~----~~~~sv-------------- 171 (1032)
T KOG1178|consen 114 VLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEI--VRR--LNIIDILLNSL----FPKLSV-------------- 171 (1032)
T ss_pred hhhcceEEEEecCCCcccccchHHHhhhhhheecccee--hhh--hhhHHHHhhcc----ccccch--------------
Confidence 9999999999999999 222111 111111000 000 00000000000 000000
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecC
Q 010774 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLP 274 (501)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~p 274 (501)
......+..+. ............++..+++.||||+||.||+|..+|..++....++...+ ..+.++.+-....
T Consensus 172 ~~~~~~f~~~~-~~~~~r~~~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f-----~~t~s~~~~~~~~ 245 (1032)
T KOG1178|consen 172 ETIADSFQMVL-HNEDTREIRVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTF-----PPTGSDRFTFKTS 245 (1032)
T ss_pred hhccchhhhhh-ccCCCcceeeecccccceEeecccccccccccchhHHHHHhhhhhccccC-----CcCccchhhhhhe
Confidence 00001111111 11222223344567789999999999999999999999999999988877 6666665422222
Q ss_pred h-HHHHHHHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHH
Q 010774 275 L-AHIYDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAY 349 (501)
Q Consensus 275 l-~~~~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 349 (501)
. ++..-..+..+.|..|+.+..+.. .+..+.+.+++++++..+.+|++++.++.....-..
T Consensus 246 ~~~~d~i~~~~~~~L~~~~~l~~p~~~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~-------------- 311 (1032)
T KOG1178|consen 246 VYFDDTIQKFIGALLFNGNNLLVPTATIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLP-------------- 311 (1032)
T ss_pred eecccchHHHHhhHhhcCceeecccccCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchh--------------
Confidence 2 333333356667788887766543 589999999999999999999999988763211000
Q ss_pred HHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecc
Q 010774 350 NYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTS 427 (501)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~ 427 (501)
. .....-++++.... +.|+....+|++....+...+...+ -..+..-|++++..+-++..
T Consensus 312 -------------~----l~~~~~~~dl~~~~-~~Lkl~~~~~ep~~v~l~~s~~~~~~~~~~~~~y~s~~~~~~~s~~ 372 (1032)
T KOG1178|consen 312 -------------L----LEHAFSLSDLLTKR-SCLKLVVLGGEPLLVSLYTSTFDLLAEIFFGLPYLSTDPTGLVSYD 372 (1032)
T ss_pred -------------h----hhhhhhcccccccc-hhheeeeecCCccchhhhhhhhhcccceeeeecccCCCCccceeHH
Confidence 0 00000000000000 2689999999999999988666654 22333449999887766543
No 128
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.68 E-value=9.1e-16 Score=157.73 Aligned_cols=387 Identities=15% Similarity=0.119 Sum_probs=258.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHH-HHHhCCCCCCCEEEEEcCCc--hhHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGS-AMRSRGVNPGDRCGIYGSNC--PEWIIA 118 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~-~L~~~gv~~gd~V~i~~~n~--~~~~~~ 118 (501)
+..+...+++.-.+++..+|.++. |.++. ...+||..+..++.++|+ .|.+.|+.++|+|.++...+ +++++.
T Consensus 93 ~~d~~avl~~~~nhs~~~ta~i~i---d~kgk-~~~~twdkl~~rA~k~a~~~l~ksgl~~~~~vvL~Y~~~e~ie~~is 168 (1363)
T KOG3628|consen 93 LTDIIAVLRYRRNHSATSTAHICI---DKKGK-ATSITWDKLLNRAEKVAHVELNKSGLKPGDRVVLYYRKCEAIEFLIS 168 (1363)
T ss_pred hcchHHHHHhhccCCCCCceEEEE---cCCCc-eeeeeHHHHHHHHHhhccHHhhccCCCCCcEEEEEEEhhhhhHHhhh
Confidence 345677788887889999999998 76666 789999999999999999 67788999999999999976 899999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
.++|...|..++|+++..+.+++..+++....+++++.............. ....+... .+..
T Consensus 169 l~gc~l~g~~~vp~~e~~s~~el~~i~~~~~~~~~l~t~a~~r~~~~~~~~--------------~s~~k~v~---~w~t 231 (1363)
T KOG3628|consen 169 LFGCFLLGIVAVPLSELSSSEELKDIVNPTPERVALTTEAGERAFINDNSP--------------VSLAKAVA---WWKT 231 (1363)
T ss_pred hccccccceeeccchhhhhhhhhhcccCCCccceEeehhhhHHHhhhccCc--------------ccHHHHHH---hhhc
Confidence 999999999999999999999999999999999999988766554322200 00000000 0000
Q ss_pred eeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeee---------------ecccc
Q 010774 199 FSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV---------------VTGKV 262 (501)
Q Consensus 199 ~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~---------------~~~~~ 262 (501)
..+. .... .....+...-. .++|-||++++|.--|++++|. ++.+.+.+..... ..-..
T Consensus 232 ~~~k---~~~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~ 306 (1363)
T KOG3628|consen 232 NDFK---GNYTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFP 306 (1363)
T ss_pred cccc---ceeehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccc
Confidence 0010 0000 00011111122 7899999999999999999998 7766655433221 01123
Q ss_pred CCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcC
Q 010774 263 CSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (501)
Q Consensus 263 ~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 337 (501)
....++++.........|+++ ++.+|+.|.+.+.++. .+..+.+.+.++|++++..-...+...+..++..
T Consensus 307 ~~~~~~~l~~~~~s~~lGlilGV~~alfsg~c~i~~p~~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~---- 382 (1363)
T KOG3628|consen 307 VPSEDVLLTNLDPSQQLGLILGVLVALFSGYCTIGCPKEVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQED---- 382 (1363)
T ss_pred cCcccceeeccCcccccchhhhhhhhhhcCceeecCchhhcCCCcchhhhhccceeEEEeecccccCcccccccCC----
Confidence 456667777777777778886 8899999999998875 6788889999999999887666665544322221
Q ss_pred ChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh----h------
Q 010774 338 GALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----S------ 407 (501)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~----~------ 407 (501)
....+++++-.+.-.+++|.+.+.-..+.++..+....+ .
T Consensus 383 ------------------------------p~a~~s~~k~~t~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~~~ 432 (1363)
T KOG3628|consen 383 ------------------------------PKATLSFKKYKTPDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETNVK 432 (1363)
T ss_pred ------------------------------cccccchhhccCCCccceeeeEEeeeecchHHHHHHHHhhcccccCcCcc
Confidence 111111222121222589999999999888765543332 1
Q ss_pred ------------CCCeeeeecccccCcceecccCCCC-----------------------------cccCcccccccC-e
Q 010774 408 ------------GAPLTQGYGLTESCSGCFTSLADVF-----------------------------NMIGTVGVPMTT-V 445 (501)
Q Consensus 408 ------------~~~l~~~yG~tE~~~~~~~~~~~~~-----------------------------~~~~s~G~p~p~-~ 445 (501)
|.-....=+++|.+......+.+.. .....+|...|| +
T Consensus 433 ~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~ 512 (1363)
T KOG3628|consen 433 VVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTLPGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDA 512 (1363)
T ss_pred eeechhhhhhhcCceEEEeccchhhhcccccCcccccccCccceeeeccccccceEEEcchhhhhhcCccccceecccce
Confidence 2212222333555544333322110 001125666665 4
Q ss_pred EEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh
Q 010774 446 EARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI 490 (501)
Q Consensus 446 ~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~ 490 (501)
.+.|++ ||. ..-|..+++|||||.++++..+||.-+..|...|
T Consensus 513 t~~vv~-~~t-~~LC~~~eVGEIwVsS~~~~~~~~al~~~t~~~F 555 (1363)
T KOG3628|consen 513 TLAVVN-PDT-NQLCKTDEVGEIWVSSNSLGKLFYALDKQTENTF 555 (1363)
T ss_pred EEEEeC-CCc-ccccccCcceeEEEecCCcccceeeccccccceE
Confidence 566666 433 3555666999999999999999999888887766
No 129
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.60 E-value=4.9e-14 Score=136.16 Aligned_cols=208 Identities=16% Similarity=0.091 Sum_probs=151.5
Q ss_pred CCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH-HHHHHHHHHHHHhcCc
Q 010774 214 LPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA-HIYDQIIETHCIHKGC 292 (501)
Q Consensus 214 ~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~-~~~g~~~~~~~l~~G~ 292 (501)
......++...|--||||||.|+-+.+++..+......+.+.+ ...+...+|++....-+. +..|+..-+++--.|+
T Consensus 84 ~~~~~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~--~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~ 161 (438)
T COG1541 84 DFAVPKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSL--YSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGA 161 (438)
T ss_pred cccccccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHH--HHccCCCCCEEEEEeeeccccCCchhHHHHHhhCE
Confidence 3444556777799999999999999999998888777766644 233677888877664421 1223334455555777
Q ss_pred EEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHH
Q 010774 293 SIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDS 371 (501)
Q Consensus 293 ~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (501)
+++=... +.+..++.+..+++|++.++|+.+..+++.+..... +.
T Consensus 162 ~vip~~~g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~----------------------------------~~ 207 (438)
T COG1541 162 TVIPISGGNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGI----------------------------------DP 207 (438)
T ss_pred EEEccCCccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCC----------------------------------Ch
Confidence 7665544 889999999999999999999999999987766531 11
Q ss_pred HHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEee
Q 010774 372 LVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLES 451 (501)
Q Consensus 372 ~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d 451 (501)
.+ .++|.+++|+|++++++.+.+.+.||+..++.||+||..+......... .-.-..-...-+.|+|
T Consensus 208 ~~---------~~lk~~i~gaE~~see~R~~ie~~~g~~~~diYGltE~~g~g~~eC~~~----~glhi~eD~~~~Ei~d 274 (438)
T COG1541 208 DK---------LSLKKGIFGAEPWSEEMRKVIENRFGCKAFDIYGLTEGFGPGAGECTER----NGLHIWEDHFIFEIVD 274 (438)
T ss_pred hh---------cceeEEEEecccCCHHHHHHHHHHhCCceeeccccccccCCcccccccc----cCCCcchhhceeeeec
Confidence 11 2899999999999999999999999999999999999977631111110 1111233677889999
Q ss_pred cCCCCccCCCCCCCceEEEec
Q 010774 452 VPEMGYDALSSVPRGEICLRG 472 (501)
Q Consensus 452 ~~~~~~~~~~~~~~Gei~v~g 472 (501)
+.++..++.| +.|||++..
T Consensus 275 P~t~e~l~dg--e~GelV~T~ 293 (438)
T COG1541 275 PETGEQLPDG--ERGELVITT 293 (438)
T ss_pred CCcCccCCCC--CeeEEEEEe
Confidence 5555555554 889999876
No 130
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.04 E-value=8.8e-09 Score=102.44 Aligned_cols=146 Identities=16% Similarity=0.145 Sum_probs=99.6
Q ss_pred EEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEec-ChHHHHHHHHHHHHHhcC-cEEEEec--
Q 010774 223 STIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL-PLAHIYDQIIETHCIHKG-CSIGFWR-- 298 (501)
Q Consensus 223 ~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~-pl~~~~g~~~~~~~l~~G-~~~~~~~-- 298 (501)
..+..||||||.|-.+..+..........+...+ ...+...++++.... .-.+.+. .+... ..+....
T Consensus 102 ~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~--~~~g~~~g~r~a~~~~~~~~ly~------~~~~~~~~~~~~~l~ 173 (430)
T TIGR02304 102 ISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKV--LPDGLFAKHRIAFFLRADNNLYQ------SVNNRWISLDFFDLL 173 (430)
T ss_pred EEEEECCCCCCCceEEEECHHHHHHHHHHHHhhh--CccccccCCcEEEEEccChhHHH------HHHhccceeeecCCC
Confidence 5577899999999999999987654433322211 111344445444441 1112221 11111 1122221
Q ss_pred CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHH
Q 010774 299 GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIR 378 (501)
Q Consensus 299 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 378 (501)
.+...+++.|.+++|+.+.+.|+.+..|+++.+.... +
T Consensus 174 ~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~l----------------------------------~-------- 211 (430)
T TIGR02304 174 APFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGEL----------------------------------T-------- 211 (430)
T ss_pred cCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcCC----------------------------------C--------
Confidence 3788999999999999999999999999886543210 0
Q ss_pred HHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcc
Q 010774 379 EAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG 423 (501)
Q Consensus 379 ~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~ 423 (501)
.+++.++++||+++++..+.+++.||+++++.||+|| |.+
T Consensus 212 ----~~~k~ii~~~E~l~~~~r~~Ie~~fg~~V~~~YG~tE-g~l 251 (430)
T TIGR02304 212 ----IKPKKVISVAEVLEPQDRELIRNVFKNTVHQIYQATE-GFL 251 (430)
T ss_pred ----CCceEEEEccCCCCHHHHHHHHHHhCCCeeEccCCch-hhe
Confidence 1689999999999999999999999999999999999 544
No 131
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.29 E-value=4.2e-05 Score=74.62 Aligned_cols=204 Identities=13% Similarity=0.106 Sum_probs=113.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHH---HHH--HHHHHHHhcCcE
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI---YDQ--IIETHCIHKGCS 293 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~---~g~--~~~~~~l~~G~~ 293 (501)
.+++..++-||||||.|--+.+.+..+..+...+...+..........-.++...|-... .+. ...+..+..+..
T Consensus 88 ~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~~ 167 (365)
T PF04443_consen 88 EEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGSR 167 (365)
T ss_pred hhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCce
Confidence 456678899999999986666666666655544433321101011122334444444221 111 112333445555
Q ss_pred EEEecC--CHHHHHHHH----hhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcch
Q 010774 294 IGFWRG--DVRYLMEDI----QELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAP 367 (501)
Q Consensus 294 ~~~~~~--~~~~~~~~i----~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 367 (501)
..+-.. +...++..+ .+.++-.+++.|.++-.++..+++......
T Consensus 168 ~~l~~~~ld~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~~~----------------------------- 218 (365)
T PF04443_consen 168 FALDNDELDLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIRFR----------------------------- 218 (365)
T ss_pred eeecCCccCHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCccc-----------------------------
Confidence 343222 566555555 356678899988877777665444321111
Q ss_pred hHHHHHHHHHHHHhCCceeEEEEec------CCCC-HHHHHHHHHhhCC----CeeeeecccccCcceecccCCCCcccC
Q 010774 368 LLDSLVFSKIREAFGGRLQAMLSGA------APLP-IHVEEFLRVTSGA----PLTQGYGLTESCSGCFTSLADVFNMIG 436 (501)
Q Consensus 368 ~~~~~~l~~~~~~~~~~lr~~~~gG------~~~~-~~~~~~~~~~~~~----~l~~~yG~tE~~~~~~~~~~~~~~~~~ 436 (501)
| .+..+.+..|| +.++ .++.+.+.+.||+ .+++.||+||.....+.... +
T Consensus 219 ------L-------~~~s~vi~~GGwK~~~~e~v~r~ef~~~l~~~~Gv~~~~~i~~~ygmtEl~s~~~~~~~------~ 279 (365)
T PF04443_consen 219 ------L-------PKGSIVIHGGGWKGRRKEAVSREEFYARLQEVFGVIPIENIYDMYGMTELNSQAYECGH------G 279 (365)
T ss_pred ------C-------CCCCEEEeCCCCCccccCccCHHHHHHHHHHHHCCCCHHHeeeeeeccccchhheeCCC------C
Confidence 0 01445566665 5575 4677788888887 69999999997654332211 1
Q ss_pred cccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCc
Q 010774 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTL 475 (501)
Q Consensus 437 s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v 475 (501)
.. ..|-- |.|+|+.+..+++. |+.|-|-+-.+..
T Consensus 280 ~~--~~p~w-V~iRDp~tl~~~~~--Ge~Gli~vidl~~ 313 (365)
T PF04443_consen 280 HF--HVPPW-VIIRDPETLEPLPP--GETGLIQVIDLAN 313 (365)
T ss_pred cc--cCCCe-EEEECCCCCcCCCC--CCeeEEEEEcccc
Confidence 11 22222 77778444455544 5899999887644
No 132
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=95.07 E-value=0.17 Score=50.06 Aligned_cols=109 Identities=13% Similarity=-0.002 Sum_probs=83.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.-+|+.++...+..+|+.|...|..+||+|..+..-+ ..-+...+|+.++|++++|+.+. .-+....+++..++.+|
T Consensus 108 ~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~~g-~~~~~~~l~~df~~tvI 186 (438)
T COG1541 108 FGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPISGG-NTERQLELMKDFKPTVI 186 (438)
T ss_pred eecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccCCc-cHHHHHHHHHhcCCcEE
Confidence 4689999999999999999999999999998877722 22267899999999999999883 44556678899999999
Q ss_pred EEcCCChhhhhhcCccC-----CCCccEEEEecCCCh
Q 010774 154 FVQENKIPSILSCLPRC-----CLYLKTIVSFANVSS 185 (501)
Q Consensus 154 l~~~~~~~~~~~~~~~~-----~~~~~~v~~~~~~~~ 185 (501)
.+....+..+.+.+.+. ...++.++..+....
T Consensus 187 ~~tps~~l~lae~~~~~G~~~~~~~lk~~i~gaE~~s 223 (438)
T COG1541 187 AATPSYLLYLAEEAEEEGIDPDKLSLKKGIFGAEPWS 223 (438)
T ss_pred EEChHHHHHHHHHHHHcCCChhhcceeEEEEecccCC
Confidence 99987765554444333 245566666544433
No 133
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=92.29 E-value=1.2 Score=46.43 Aligned_cols=98 Identities=17% Similarity=0.176 Sum_probs=49.6
Q ss_pred hhhcCcEEEec-chHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHH-------HH
Q 010774 309 QELKPTMFSGV-PRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIR-------EA 380 (501)
Q Consensus 309 ~~~~~t~~~~~-P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~~ 380 (501)
++.+++.+.+. |+++..+.+.+++. ..+.+.+++-+.+..+ .++|...+ .++... +.
T Consensus 200 ~~~~l~~i~~~~p~~l~~~~~~le~~----------~~~l~~dI~~G~~~~~----~p~p~rA~-~L~~~~~~~~~~~~~ 264 (528)
T PF03321_consen 200 QDRDLRMISGWFPSFLLLLFRLLEKH----------WEELVEDIRDGTLSLL----RPNPERAA-ELRAEFEKGRGIPKR 264 (528)
T ss_dssp CGGGEEEEEEEEHHHHHHHHHHHHHH----------HHHHHHHHHHTS--C-----S--HHHHH-HHHHHHCCSTTHHHH
T ss_pred cccCcCEEEeeCHHHHHHHHHHHHHh----------hhHhhHHhcCCccccC----CCCHHHHH-HHHHhhcccCCCHHH
Confidence 37888887764 55666666655443 3444555554444411 11111111 111100 01
Q ss_pred hCCceeEEEEecCCCCHHHHHHHHHhhC-CC-eeeeecccccC
Q 010774 381 FGGRLQAMLSGAAPLPIHVEEFLRVTSG-AP-LTQGYGLTESC 421 (501)
Q Consensus 381 ~~~~lr~~~~gG~~~~~~~~~~~~~~~~-~~-l~~~yG~tE~~ 421 (501)
+=++|+.+.+.+..-.....+.+++.+| +. +...|++||+-
T Consensus 265 lWP~L~~v~~~~~g~~~~y~~~l~~~~g~~~~~~~~y~ASEg~ 307 (528)
T PF03321_consen 265 LWPNLKLVSCWGGGSMAPYAPKLREYFGGVPIQSKGYGASEGF 307 (528)
T ss_dssp HSTT--EEEEE-SGGGGGGHHHHHHHHTTS-EEE-EEEETTEE
T ss_pred hCCCCcEEEEEcCCChHHHHHHHHHHcCCCceeeccccccceE
Confidence 1158997777777766777788888774 33 55789999953
No 134
>PLN02247 indole-3-acetic acid-amido synthetase
Probab=86.72 E-value=40 Score=35.50 Aligned_cols=30 Identities=27% Similarity=0.433 Sum_probs=24.8
Q ss_pred CCCeEEEEecCCCCC-CCceEEeecHHHHHH
Q 010774 219 KTNISTIMYTSGTTG-EPKGVVLTNQAIVAE 248 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG-~PK~v~~sh~~l~~~ 248 (501)
+..+.+..-|||||| .+|-+.+|+..+-..
T Consensus 88 ~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~~ 118 (606)
T PLN02247 88 AQPITELLTSSGTSGGQPKLMPSTAEELDRK 118 (606)
T ss_pred CCCcceeeccCCCCCCceeEeeccHHHHHHH
Confidence 566778999999995 899999999876443
No 135
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=86.04 E-value=5.5 Score=40.53 Aligned_cols=82 Identities=18% Similarity=0.149 Sum_probs=63.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
..+|.+++...+...++.+...|+.+||++.++.+.+.. ....++++..+|+.+++... ......+++..++..+
T Consensus 104 v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~~~---~~~~~~~i~~~~~t~l 180 (445)
T TIGR03335 104 FFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPEGK---CTFPIRIIESYRPTGI 180 (445)
T ss_pred eeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcCCc---hhHHHHHHHHhCCCEE
Confidence 467999999999899998888999999999998876542 33456788999998887653 2345677888999988
Q ss_pred EEcCCCh
Q 010774 154 FVQENKI 160 (501)
Q Consensus 154 l~~~~~~ 160 (501)
+.....+
T Consensus 181 ~~~ps~l 187 (445)
T TIGR03335 181 VASVFKL 187 (445)
T ss_pred EECHHHH
Confidence 7755443
No 136
>PLN02620 indole-3-acetic acid-amido synthetase
Probab=84.86 E-value=10 Score=39.75 Aligned_cols=30 Identities=27% Similarity=0.294 Sum_probs=24.9
Q ss_pred CCCCeEEEEecCCCCC-CCceEEeecHHHHH
Q 010774 218 KKTNISTIMYTSGTTG-EPKGVVLTNQAIVA 247 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG-~PK~v~~sh~~l~~ 247 (501)
.+..+.+..-|||||| .+|-+.+|+..+-.
T Consensus 99 ~~~pi~~F~~SSGTT~g~~K~IP~t~e~l~~ 129 (612)
T PLN02620 99 CSKPISEFLTSSGTSGGERKLMPTIEEELGR 129 (612)
T ss_pred CCCChhhhhhcCCCCCCceeeeecCHHHHHH
Confidence 3566678899999997 59999999997665
No 137
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=84.16 E-value=5.8 Score=40.03 Aligned_cols=88 Identities=16% Similarity=0.095 Sum_probs=67.4
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
.+|..++......+++.+...|+++||++........ .....++++..+|+.++++++.. .+.+...|+..++.+++
T Consensus 94 ~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~i~~~~~t~l~ 172 (422)
T TIGR02155 94 GYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPISGGQ-TEKQVQLIQDFKPDIIM 172 (422)
T ss_pred ccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecCCCC-HHHHHHHHHHHCCCEEE
Confidence 5678888777777888888889999999887665432 22334677889999999987754 57788899999999999
Q ss_pred EcCCChhhhhh
Q 010774 155 VQENKIPSILS 165 (501)
Q Consensus 155 ~~~~~~~~~~~ 165 (501)
.....+..+.+
T Consensus 173 ~~Ps~l~~L~~ 183 (422)
T TIGR02155 173 VTPSYMLNLLE 183 (422)
T ss_pred EcHHHHHHHHH
Confidence 88876655433
No 138
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=78.92 E-value=14 Score=33.59 Aligned_cols=54 Identities=19% Similarity=0.222 Sum_probs=43.9
Q ss_pred HhCCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCc
Q 010774 95 RSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEV 150 (501)
Q Consensus 95 ~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~ 150 (501)
...|+.++|++. .+|-.- .+...+++++..|++++.+ ++++++++...+++.++
T Consensus 171 ~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l~~G~t~v~~-~rFd~~~~l~~i~~~~v 226 (227)
T TIGR03089 171 RAAGLPPGDRVL-VLAWTDLEDFLATLLAPLAAGGSLVLV-THPDPARLDQIAETERV 226 (227)
T ss_pred hhcCCCCCCeEE-ecCCCchHHHHHHHHHHhccCceEEEe-cCCCHHHHHHHHHhhcC
Confidence 556889999999 888542 4456789999999999888 68999999888887764
No 139
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=78.63 E-value=30 Score=35.63 Aligned_cols=105 Identities=17% Similarity=0.155 Sum_probs=72.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++... .+.+|. ...+|++.+...+..+.. ..+++++|++...++..- .+...+++++..|+.+++
T Consensus 164 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 238 (513)
T PRK07656 164 DPDDVADILFT--SGTTGRPKGAMLTHRQLLSNAADWAE---YLGLTEGDRYLAANPFFHVFGYKAGVNAPLMRGATILP 238 (513)
T ss_pred CCCceEEEEeC--CCCCCCCCEEEEecHHHHHHHHHHHH---hhCCCCCCeEEEccchHHHHHHHHHHHHHHHcCceEEe
Confidence 34556665440 222232 247899988766655443 347889999988888543 344567899999998877
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhc
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSC 166 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~ 166 (501)
. +..+++.+...++..++.+++.....+..+.+.
T Consensus 239 ~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~ 272 (513)
T PRK07656 239 L-PVFDPDEVFRLIETERITVLPGPPTMYNSLLQH 272 (513)
T ss_pred c-CcCCHHHHHHHHHHhCCeEEechHHHHHHHHcC
Confidence 5 567899999999999999998877766555443
No 140
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=74.05 E-value=28 Score=35.92 Aligned_cols=119 Identities=10% Similarity=-0.046 Sum_probs=78.7
Q ss_pred CCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEecC
Q 010774 58 NNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLYD 134 (501)
Q Consensus 58 ~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~ 134 (501)
+.++++.. ..+..|. ...+|++.+...+..... ..+++++|++....+..- ..+...++++..|+.++..+.
T Consensus 167 ~~~~~i~~--TSGtTG~PK~v~~t~~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~G~~~v~~~~ 241 (521)
T PRK06187 167 NDAAAMLY--TSGTTGHPKGVVLSHRNLFLHSLAVCA---WLKLSRDDVYLVIVPMFHVHAWGLPYLALMAGAKQVIPRR 241 (521)
T ss_pred cceEEEEE--CCCCCCCCceEEeehHHHHHHHHHHHH---hhCCCCCCEEEEeCCchHHhhHHHHHHHHHhCCEEEecCC
Confidence 45565544 1233332 246789988876666655 457889999998888543 334445668889998887766
Q ss_pred CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc---CCCCccEEEEecC
Q 010774 135 TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR---CCLYLKTIVSFAN 182 (501)
Q Consensus 135 ~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~---~~~~~~~v~~~~~ 182 (501)
. +++.+...++..++..+++....+..+.+.... ....++.++.-+.
T Consensus 242 ~-~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~~~~~~~l~~v~~~Ge 291 (521)
T PRK06187 242 F-DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAYFVDFSSLRLVIYGGA 291 (521)
T ss_pred C-CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCCccCcchhhEEEEcCc
Confidence 4 899999999999999999987766555443322 2234555444443
No 141
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=69.27 E-value=50 Score=32.86 Aligned_cols=122 Identities=18% Similarity=0.103 Sum_probs=83.4
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYV 130 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v 130 (501)
.++.++++... .+.+|. ...+|++.+...+..+. +.. .+++ |++..++|-+ ..++..+++++..|+.++
T Consensus 153 ~~~~~~~i~~T--SGTTG~pK~v~~t~~~~~~~~~~~~--~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~ 226 (417)
T PF00501_consen 153 SPDDPAFILFT--SGTTGKPKGVVLTHRNLLAQARALA--LPEYFGLG--DRILSFLPLSHIFGLISALLAALFSGATLV 226 (417)
T ss_dssp TTTSEEEEEEE--SSSSSSEEEEEEEHHHHHHHHHHHH--HHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHCTSEEE
T ss_pred CccceeEeecc--ccccccccccccccccccccccccc--cccccccC--ceEEeecccccccccccccccccccccccc
Confidence 56888887661 222332 35889999999988877 433 2333 6777776644 344478999999999999
Q ss_pred EecCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCc-------cCCCCccEEEEecCC
Q 010774 131 PLYDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLP-------RCCLYLKTIVSFANV 183 (501)
Q Consensus 131 ~l~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~-------~~~~~~~~v~~~~~~ 183 (501)
..+.... ++.+...++..++..+++....+..+.+... ..+..++.++..+..
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~~~~l~~lr~v~~~G~~ 288 (417)
T PF00501_consen 227 LPSPFDLFDPESLLELISRYKPTILFAVPSMLEALLQSPEEKTKISKKDLSSLRTVISGGEP 288 (417)
T ss_dssp EESSHHHHHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTTHHGTTTTGTT-SEEEEESST
T ss_pred ccccccccccccchhccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 8886544 5677899999999999999887777665221 234567777766554
No 142
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=66.92 E-value=35 Score=34.20 Aligned_cols=116 Identities=13% Similarity=-0.002 Sum_probs=77.0
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEec
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPLY 133 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l~ 133 (501)
+++++++... .+..|. ...+|++.+...+..++.. .+++++|++...++-. ...+..+++++..|+.++..+
T Consensus 110 ~~~~~~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~ 184 (436)
T TIGR01923 110 MDQIATLMFT--SGTTGKPKAVPHTFRNHYASAVGSKEN---LGFTEDDNWLLSLPLYHISGLSILFRWLIEGATLRIVD 184 (436)
T ss_pred cCceEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHhh---cCCCCCceEEEccCcHhHHHHHHHHHHHhcCceEEecc
Confidence 3556665441 233332 2478999988777666654 4789999998887753 233345788899999988876
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEec
Q 010774 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (501)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (501)
+. +.+...++..++..+......+..+.+..... ..++.++..+
T Consensus 185 ~~---~~~~~~l~~~~~t~~~~~P~~l~~l~~~~~~~-~~l~~~~~~G 228 (436)
T TIGR01923 185 KF---NQLLEMIANERVTHISLVPTQLNRLLDEGGHN-ENLRKILLGG 228 (436)
T ss_pred hH---HHHHHHHHHhCCeEEEeHHHHHHHHHhCcCCC-CceEEEEECC
Confidence 53 38888899999999998877666555443322 4455555543
No 143
>PRK08315 AMP-binding domain protein; Validated
Probab=66.90 E-value=77 Score=33.09 Aligned_cols=100 Identities=16% Similarity=0.139 Sum_probs=69.3
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEEe
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l 132 (501)
++.++++... .+..|. ...+|++.+...+..+... .+++++|++....|- ...++..+++++..|+.++..
T Consensus 198 ~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 272 (559)
T PRK08315 198 PDDPINIQYT--SGTTGFPKGATLTHRNILNNGYFIGEA---MKLTEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYP 272 (559)
T ss_pred CCCcEEEEEc--CCCCCCcceEEeeHHHHHHHHHHHHHh---cCCCCCceEEEecCcHHHHHHHHHHHHHHhccceEEEe
Confidence 4555555440 333332 2467888887655544433 478999999888775 344556678889999888866
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
....++..+...++..++..++.....+.
T Consensus 273 ~~~~~~~~~~~~l~~~~~t~~~~~P~~~~ 301 (559)
T PRK08315 273 GEGFDPLATLAAVEEERCTALYGVPTMFI 301 (559)
T ss_pred cCCCCHHHHHHHHHHcCCeEEecchHHHH
Confidence 66778889999999999999887665443
No 144
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=66.23 E-value=58 Score=32.23 Aligned_cols=123 Identities=15% Similarity=0.122 Sum_probs=84.1
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++... .+..+. ...+|++.+...+..+.. ..+++++|++....+.+. -.+..+++.+..|+..+..
T Consensus 118 ~~~~~~~i~~T--SGTtG~pK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~~~~~p~~~~~~~~~~~~~l~~g~~~~~~ 192 (408)
T TIGR01733 118 GPDDLAYVIYT--SGSTGRPKGVVVTHRSLVNLLAWLAR---RYGLDPDDRVLQFASLSFDASVEEIFGTLLAGATLVVP 192 (408)
T ss_pred CCCCcEEEEEc--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCceEEEecCCccchhHHHHHHHHhCCCEEEEc
Confidence 35666776541 222222 346788888877776665 446778999988887553 3456678888889888877
Q ss_pred cCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCC
Q 010774 133 YDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (501)
+.... ++.+..+++..++..+++....+..+.+........++.++..+..
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~t~l~~~p~~~~~l~~~~~~~~~~l~~v~~~g~~ 245 (408)
T TIGR01733 193 PEDEERDAALLAALIAEHPVTVLNLTPSLLALLAAALPPALASLRLVILGGEA 245 (408)
T ss_pred ChhhccCHHHHHHHHHHcCceEEEeCHHHHHHHHHhhhhcccCceEEEEeCcc
Confidence 66554 7888899999999999998887776655544444566666655543
No 145
>PRK12583 acyl-CoA synthetase; Provisional
Probab=65.66 E-value=92 Score=32.47 Aligned_cols=101 Identities=11% Similarity=0.080 Sum_probs=69.3
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++... .+.+|. ...+|++.+...+..+... .+++++|++....|- ....+..+++++..|+.++.
T Consensus 199 ~~~~~a~i~~T--SGsTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~ 273 (558)
T PRK12583 199 DRDDPINIQYT--SGTTGFPKGATLSHHNILNNGYFVAES---LGLTEHDRLCVPVPLYHCFGMVLANLGCMTVGACLVY 273 (558)
T ss_pred CCCCcEEEEEC--CCCCCCCceEEeeHHHHHHHHHHHHHH---hCCCCCCeEEEecCchhhhhHHHHHHHHHhcCceEEe
Confidence 35556654440 232232 2478898887666555444 378899999887764 34566777888889988885
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
.....++..+...+++.++..++.....+.
T Consensus 274 ~~~~~~~~~~~~~i~~~~~t~l~~~P~~~~ 303 (558)
T PRK12583 274 PNEAFDPLATLQAVEEERCTALYGVPTMFI 303 (558)
T ss_pred ecCCCCHHHHHHHHHHcCCeEEeccHHHHH
Confidence 555678888889999999999887665443
No 146
>COG4009 Uncharacterized protein conserved in archaea [Function unknown]
Probab=63.68 E-value=32 Score=24.98 Aligned_cols=65 Identities=18% Similarity=0.168 Sum_probs=52.0
Q ss_pred EeeHHHHHHHHHHHHHH---HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 010774 77 WLTYQEVYDAAIRFGSA---MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~---L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
..||+||.+.-+.++.. |.+..++..|.|+|+-=++.... -++.++.-.+.+++...++..++++
T Consensus 9 i~t~keL~eE~~~Fv~~kA~l~k~~L~dDde~aIfnI~gT~Sy-----------~V~Fl~~~~s~eev~~ele~mga~i 76 (88)
T COG4009 9 IATYKELDEELKDFVRLKAHLAKVDLNDDDELAIFNIEGTSSY-----------YVVFLEEVESEEEVERELEDMGAEI 76 (88)
T ss_pred heeHHhhhHHHHHHHHHHHHhcccccCCCCcEEEEEecCceeE-----------EEEEEeccCCHHHHHHHHHHhCchh
Confidence 57999999888877664 66667899999999987765432 4677888889999999999998864
No 147
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=62.74 E-value=58 Score=33.97 Aligned_cols=93 Identities=13% Similarity=0.124 Sum_probs=74.9
Q ss_pred eEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCc
Q 010774 237 GVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPT 314 (501)
Q Consensus 237 ~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t 314 (501)
|..+|++.+...+..++..+.....+...+|++....|-...+ ...+++++..|+.+.-... +...+...++.-+++
T Consensus 43 g~~~T~~e~~~~~~r~A~~L~~~~~~i~~gDvV~i~~pNs~~~-~~~~la~~~~Ga~~~~~Np~~~~~ei~~~~~~s~~k 121 (537)
T KOG1176|consen 43 GRELTYSELHDRCRRLASALSELGLGIKKGDVVGILAPNTPEF-VELALAVPMAGAVLNPLNPRLTASEIAKQLKDSKPK 121 (537)
T ss_pred CcEEcHHHHHHHHHHHHHHHHhcCCCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCccccccCcccCHHHHHHHHHhcCCe
Confidence 7899999999999888777643333578899999999987543 2357788889998876654 899999999999999
Q ss_pred EEEecchHHHHHHHHH
Q 010774 315 MFSGVPRVYDRIYTGI 330 (501)
Q Consensus 315 ~~~~~P~~~~~l~~~~ 330 (501)
++++....+..+....
T Consensus 122 iif~d~~~~~~i~~~~ 137 (537)
T KOG1176|consen 122 LIFVDEDFYDKISEAT 137 (537)
T ss_pred EEEEcCchHHHHHHHH
Confidence 9999999988876543
No 148
>PLN02565 cysteine synthase
Probab=60.61 E-value=85 Score=30.36 Aligned_cols=69 Identities=9% Similarity=0.047 Sum_probs=51.8
Q ss_pred HHHHHHhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 90 FGSAMRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 90 ~A~~L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+-..+.+.|. .+|....+.....-.-+...++|..+|..+..+-|...+......++..++++++++..
T Consensus 53 ~l~~~~~~g~~~~g~~~vv~aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 122 (322)
T PLN02565 53 MITDAEEKGLIKPGESVLIEPTSGNTGIGLAFMAAAKGYKLIITMPASMSLERRIILLAFGAELVLTDPA 122 (322)
T ss_pred HHHHHHHcCCCCCCCcEEEEECCChHHHHHHHHHHHcCCeEEEEeCCCCcHHHHHHHHHcCCEEEEeCCC
Confidence 3334445564 78866555555555666667788889999988888888888889999999999999864
No 149
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=60.38 E-value=94 Score=31.97 Aligned_cols=86 Identities=13% Similarity=-0.018 Sum_probs=65.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
..+|++.+...+......+ ++.+||++...+|.+-. .+..+++++..|+.++.. +...++.+...++..++..+.
T Consensus 179 v~~t~~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 254 (515)
T TIGR03098 179 VVLSHRNLVAGAQSVATYL---ENRPDDRLLAVLPLSFDYGFNQLTTAFYVGATVVLH-DYLLPRDVLKALEKHGITGLA 254 (515)
T ss_pred EEEecHHHHHHHHHHHHHh---CCCcccEEEEECchhhHhHHHHHHHHHHcCCEEEEc-CCCCHHHHHHHHHHcCCceEe
Confidence 4678888887766655443 67889999988885432 345678889999988866 456788999999999999999
Q ss_pred EcCCChhhhhh
Q 010774 155 VQENKIPSILS 165 (501)
Q Consensus 155 ~~~~~~~~~~~ 165 (501)
.....+..+..
T Consensus 255 ~~P~~~~~l~~ 265 (515)
T TIGR03098 255 AVPPLWAQLAQ 265 (515)
T ss_pred cChHHHHHHHh
Confidence 88876665543
No 150
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=60.37 E-value=1.7e+02 Score=30.47 Aligned_cols=122 Identities=14% Similarity=-0.017 Sum_probs=78.1
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|. ...+|++.+...+.... ...++.++|++..++|-. ..+...++..+..|+.++.
T Consensus 181 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~---~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~vv~ 255 (539)
T PRK06334 181 DPEDVAVILFT--SGTEKLPKGVPLTHANLLANQRACL---KFFSPKEDDVMMSFLPPFHAYGFNSCTLFPLLSGVPVVF 255 (539)
T ss_pred CcCCEEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHH---HhcCCCCCceEEEecchHhhhhhHHHHHHHHHcCCeEEE
Confidence 46777776650 222222 24789888876554433 345788899988887743 2233345777888888776
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---cCCCCccEEEEecC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFAN 182 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~v~~~~~ 182 (501)
......++.+...++..++..++.....+..+.+... .....++.++.-+.
T Consensus 256 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~ 309 (539)
T PRK06334 256 AYNPLYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQESCLPSLRFVVIGGD 309 (539)
T ss_pred ecCCCCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhcccccccccEEEECCc
Confidence 6556788999999999999999988776655543221 12345555555443
No 151
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=57.61 E-value=90 Score=31.80 Aligned_cols=120 Identities=13% Similarity=0.024 Sum_probs=75.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++... .+.+|. ...+|++.+...+.... ...+++++|++...+|-. ...+..+++.+..|+.++..
T Consensus 139 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 213 (483)
T PRK03640 139 DLDEVATIMYT--SGTTGKPKGVIQTYGNHWWSAVGSA---LNLGLTEDDCWLAAVPIFHISGLSILMRSVIYGMRVVLV 213 (483)
T ss_pred CCCCeEEEEeC--CCcCCCCcEEEEecHHHHHHHHHHH---HhcCCCcCcEEEEecCHHHHHHHHHHHHHHhcCCEEEec
Confidence 34566655440 233332 24678887765443322 235889999999988853 22234467777889888766
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc--cCCCCccEEEEec
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFA 181 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~--~~~~~~~~v~~~~ 181 (501)
+ ..++.++...++..++..+......+..+.+... .....++.++.-+
T Consensus 214 ~-~~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~~~~~~lr~~~~~g 263 (483)
T PRK03640 214 E-KFDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEGTYPSSFRCMLLGG 263 (483)
T ss_pred C-CCCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCccccCCcceEEEEcC
Confidence 5 5788999999999999999998776665543322 1223455554444
No 152
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=56.54 E-value=32 Score=28.44 Aligned_cols=41 Identities=7% Similarity=-0.013 Sum_probs=33.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC---chhHHHHHHHHHhcCCE
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSN---CPEWIIAMEACNSQAIT 128 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n---~~~~~~~~lA~~~~G~~ 128 (501)
..++..|.+.|+.+++.|++++.. ......+++++..+|..
T Consensus 81 ~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~ 124 (138)
T cd01445 81 AEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHP 124 (138)
T ss_pred HHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCC
Confidence 467888899999999999999975 56666777888888865
No 153
>PRK11761 cysM cysteine synthase B; Provisional
Probab=55.60 E-value=1.1e+02 Score=29.26 Aligned_cols=66 Identities=11% Similarity=0.035 Sum_probs=48.6
Q ss_pred HHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 91 GSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 91 A~~L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
...+.+.| +.+|++|+.. ..+-.-..+.++|...|..+..+-|...+......++..++++++++.
T Consensus 51 ~~~a~~~g~~~~g~~vv~a-SsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~~~~ 117 (296)
T PRK11761 51 IVQAEKRGEIKPGDTLIEA-TSGNTGIALAMIAAIKGYRMKLIMPENMSQERRAAMRAYGAELILVPK 117 (296)
T ss_pred HHHHHHcCCCCCCCEEEEe-CCChHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 33344455 5778776553 444455566678888999888887877777888899999999999986
No 154
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=51.33 E-value=1.7e+02 Score=29.90 Aligned_cols=101 Identities=15% Similarity=0.141 Sum_probs=72.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcC--CchhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGS--NCPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~ 131 (501)
.||..+.+..- .+..|. ..++|-.++.+.+..++.. .|+...+++++-.| .+.-.++..+|++..|++++.
T Consensus 232 ~pdd~~niQFT--SGTTG~PKgatLsH~~~~Nna~~vg~r---~g~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vf 306 (596)
T KOG1177|consen 232 SPDDAVNIQFT--SGTTGAPKGATLSHYNFLNNARAVGAR---AGYNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVF 306 (596)
T ss_pred CCCCceEEEec--cCCCCCCcceeeehhhhhhhHHHHHHH---hCcCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEe
Confidence 45665544330 232222 2489999999998888764 47755444444333 345567888999999999999
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
-.|.+.+...-..+...++..++......-
T Consensus 307 p~~~f~~k~alqai~~ekcT~l~gtPtM~~ 336 (596)
T KOG1177|consen 307 PAPSFDPKDALQAISNEKCTTLYGTPTMFV 336 (596)
T ss_pred eCCCCChHHHHHHHHhhceEEEecChHHHH
Confidence 999999999999999999999998775443
No 155
>PLN02556 cysteine synthase/L-3-cyanoalanine synthase
Probab=51.28 E-value=1.2e+02 Score=29.90 Aligned_cols=62 Identities=6% Similarity=0.028 Sum_probs=48.0
Q ss_pred hCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 96 ~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
+.| +++|....+....+-.-....++|...|..+..+-|.....+....++..++++++++.
T Consensus 103 ~~G~i~pG~~~vV~aSsGN~G~alA~~a~~~G~~~~ivvp~~~~~~k~~~lr~~GA~Vi~~~~ 165 (368)
T PLN02556 103 KKNLITPGKTTLIEPTSGNMGISLAFMAAMKGYKMILTMPSYTSLERRVTMRAFGAELVLTDP 165 (368)
T ss_pred HcCCcCCCCCEEEEeCCchHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECC
Confidence 445 67885544545556666677778899999988888887778888999999999999974
No 156
>PRK09188 serine/threonine protein kinase; Provisional
Probab=50.39 E-value=6.3 Score=38.77 Aligned_cols=11 Identities=18% Similarity=0.232 Sum_probs=9.4
Q ss_pred hccCcccCCCC
Q 010774 490 IVDGWFHTEVH 500 (501)
Q Consensus 490 ~~dgw~~TGD~ 500 (501)
+.||||+|||.
T Consensus 206 ~~dgW~~TGDl 216 (365)
T PRK09188 206 PSRIWLATGKK 216 (365)
T ss_pred ccCcEEeCCCE
Confidence 37899999995
No 157
>TIGR01139 cysK cysteine synthase A. This model distinguishes cysteine synthase A (CysK) from cysteine synthase B (CysM). CysM differs in having a broader specificity that also allows the use of thiosulfate to produce cysteine thiosulfonate.
Probab=50.26 E-value=1.6e+02 Score=27.94 Aligned_cols=66 Identities=8% Similarity=0.060 Sum_probs=46.5
Q ss_pred HHHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 93 AMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 93 ~L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
...+.| +.+|++|+ ....+-.-..+.+++.+.|..+..+-|...+......++..++.+++++...
T Consensus 47 ~a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~Gl~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~~ 113 (298)
T TIGR01139 47 DAEKRGLLKPGKTIV-EPTSGNTGIALAMVAAARGYKLILTMPETMSIERRKLLKAYGAELVLTPGAE 113 (298)
T ss_pred HHHHcCCCCCCCEEE-EeCCChhHHHHHHHHHHcCCeEEEEeCCccCHHHHHHHHHcCCEEEEECCCC
Confidence 344455 47788774 4444444455566777799988877777666667888999999999998753
No 158
>PRK07788 acyl-CoA synthetase; Validated
Probab=50.15 E-value=94 Score=32.41 Aligned_cols=103 Identities=12% Similarity=-0.035 Sum_probs=67.2
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
.+|++.+...+. ......++.++|++....|..-.+ +..+++++..|+.++.. ...+++++...++..++..++.
T Consensus 226 ~~s~~~~~~~~~---~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~l~~G~~~v~~-~~~~~~~~~~~i~~~~vt~~~~ 301 (549)
T PRK07788 226 PRPEPSPLAPLA---GLLSRVPFRAGETTLLPAPMFHATGWAHLTLAMALGSTVVLR-RRFDPEATLEDIAKHKATALVV 301 (549)
T ss_pred eccCccHHHHHH---HHHhhCCCCcCCeEEEccchHHHHHHHHHHHHHHhCCEEEEC-CCCCHHHHHHHHHHhCCcEEEE
Confidence 566666654433 334456788999888777743222 23456677888887765 5678889999999999999999
Q ss_pred cCCChhhhhhcCcc-----CCCCccEEEEecCC
Q 010774 156 QENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (501)
Q Consensus 156 ~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~ 183 (501)
....+..+.+.... ....++.++..+..
T Consensus 302 ~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gG~~ 334 (549)
T PRK07788 302 VPVMLSRILDLGPEVLAKYDTSSLKIIFVSGSA 334 (549)
T ss_pred HHHHHHHHHhCcccccCCCCCCceeEEEEeCCC
Confidence 87766655443322 23455555555443
No 159
>PLN03051 acyl-activating enzyme; Provisional
Probab=49.37 E-value=1e+02 Score=31.76 Aligned_cols=104 Identities=10% Similarity=-0.115 Sum_probs=67.4
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEec
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLY 133 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~ 133 (501)
++.++++..- .+.++. -..+|++.+...+... ....++.++|++...+|-.- .....+++++..|++++...
T Consensus 118 ~~d~a~i~yT--SGTTG~PKgV~~sh~~~~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~t~v~~~ 192 (499)
T PLN03051 118 VESVTNILFS--SGTTGEPKAIPWTHLSPLRCASDG---WAHMDIQPGDVVCWPTNLGWMMGPWLLYSAFLNGATLALYG 192 (499)
T ss_pred ccceEEEEeC--CCCCCCCceEEEccchHHHHHHHH---HHhcCCCCCCEEEEccCcceeeehHHHHHHHHcCCEEEecC
Confidence 4566665540 222222 1366777765543322 23457888998877766432 12345678889999988876
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
....++.+...++..++.++..-...+..+.+
T Consensus 193 ~~~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~ 224 (499)
T PLN03051 193 GAPLGRGFGKFVQDAGVTVLGLVPSIVKAWRH 224 (499)
T ss_pred CCCCcHHHHHHHHHhCCcEEEeCHHHHHHHHh
Confidence 55567889999999999999987776655443
No 160
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=49.24 E-value=1.5e+02 Score=31.22 Aligned_cols=122 Identities=11% Similarity=-0.049 Sum_probs=78.2
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++... .+.+|. ...+|++.+...+.. .....+++++|++....+.... +...+++.+..|+..+.
T Consensus 203 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~~G~~~v~ 277 (570)
T PRK04319 203 DREDGAILHYT--SGSTGKPKGVLHVHNAMLQHYQT---GKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWLNGATNVI 277 (570)
T ss_pred CCCCCEEEEeC--CCCCCCCCEEEEecHHHHHHHHH---HHHhcCCCCCceEEecCChHHhhCchHHHHHHHhcCceEEE
Confidence 34566666540 233332 236788877654433 3334578889987766654432 34567888899999888
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-----cCCCCccEEEEecC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-----RCCLYLKTIVSFAN 182 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~ 182 (501)
.....+++.+...++..++..++.....+..+.+... .....++.++..+.
T Consensus 278 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~lr~~~~gG~ 333 (570)
T PRK04319 278 DGGRFSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDLVKKYDLSSLRHILSVGE 333 (570)
T ss_pred ECCCCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcccccCCcccceEEEEccc
Confidence 7777889999999999999999988776665543221 12244555555543
No 161
>PLN03013 cysteine synthase
Probab=48.07 E-value=1.6e+02 Score=29.72 Aligned_cols=66 Identities=8% Similarity=0.065 Sum_probs=50.2
Q ss_pred HHHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 93 AMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 93 ~L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.+.| +++|...++....+-.-+...++|...|..+..+-|...+.+....++..++++++++..
T Consensus 164 ~a~~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ira~GAeVi~v~~~ 230 (429)
T PLN03013 164 DAEQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDPA 230 (429)
T ss_pred HHHHcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHHHcCCEEEEECCC
Confidence 344555 578865556666666666677788889988888878778888889999999999999764
No 162
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=46.80 E-value=2.9e+02 Score=30.04 Aligned_cols=101 Identities=11% Similarity=0.006 Sum_probs=66.6
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|. ...+|++.+...+..+.. ..++.++|++...+|- ...+...+++.+..|+.++.
T Consensus 363 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~Pl~h~~g~~~~~~~~l~~G~~vv~ 437 (718)
T PRK08043 363 QPEDAALILFT--SGSEGHPKGVVHSHKSLLANVEQIKT---IADFTPNDRFMSALPLFHSFGLTVGLFTPLLTGAEVFL 437 (718)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hhCCCccCeEEEcCcchhhhhhHHHHHHHHHcCCEEEE
Confidence 45666665540 233332 247888888766655543 3478899999888885 23445567888889998887
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
.+.......+...++..++..++.....+.
T Consensus 438 ~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~ 467 (718)
T PRK08043 438 YPSPLHYRIVPELVYDRNCTVLFGTSTFLG 467 (718)
T ss_pred eCCcccHHHHHHHHHhcCCeEEEchHHHHH
Confidence 664455566777788888888876554433
No 163
>TIGR02370 pyl_corrinoid methyltransferase cognate corrinoid proteins, Methanosarcina family. This model describes a subfamily of the B12 binding domain (pfam02607, pfam02310) proteins. Members of the seed alignment include corrinoid proteins specific to four different, mutally non-homologous enzymes of the genus Methanosarcina. Three of the four cognate enzymes (trimethylamine, dimethylamine, and monomethylamine methyltransferases) all have the unusual, ribosomally incorporated amino acid pyrrolysine at the active site. All act in systems in which a methyl group is transferred to the corrinoid protein to create methylcobalamin, from which the methyl group is later transferred elsewhere.
Probab=46.77 E-value=2.1e+02 Score=25.34 Aligned_cols=96 Identities=16% Similarity=0.202 Sum_probs=0.0
Q ss_pred CCCcEEEEecC--hHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 264 SEEDTYFSFLP--LAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 264 ~~~d~~l~~~p--l~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
..+.+++.+.+ .+.+.-.+.....=..|-.++.... .++.+.+.+.+.+++++..+-.+...+...
T Consensus 83 ~~~~vv~~t~~gd~H~lG~~~v~~~l~~~G~~vi~LG~~vp~e~~v~~~~~~~pd~v~lS~~~~~~~~~~---------- 152 (197)
T TIGR02370 83 VLGKVVCGVAEGDVHDIGKNIVVTMLRANGFDVIDLGRDVPIDTVVEKVKKEKPLMLTGSALMTTTMYGQ---------- 152 (197)
T ss_pred CCCeEEEEeCCCchhHHHHHHHHHHHHhCCcEEEECCCCCCHHHHHHHHHHcCCCEEEEccccccCHHHH----------
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCcee---EEEEecCCCCHHHHHHH
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQ---AMLSGAAPLPIHVEEFL 403 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr---~~~~gG~~~~~~~~~~~ 403 (501)
....+.+.-. .++ .+++||.+++++..+.+
T Consensus 153 --------------------------~~~i~~l~~~--------~~~~~v~i~vGG~~~~~~~~~~~ 185 (197)
T TIGR02370 153 --------------------------KDINDKLKEE--------GYRDSVKFMVGGAPVTQDWADKI 185 (197)
T ss_pred --------------------------HHHHHHHHHc--------CCCCCCEEEEEChhcCHHHHHHh
No 164
>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]
Probab=46.60 E-value=72 Score=30.04 Aligned_cols=65 Identities=12% Similarity=0.101 Sum_probs=52.6
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEE-EecCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV-PLYDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v-~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~ 162 (501)
.+++||.|+=-..||.---+.+--|...|.--+ .+..+...+++...|+..+|..||++++....
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~~~ 222 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELRDR 222 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhcch
Confidence 578999999888888766667777777776544 45667889999999999999999999876643
No 165
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=46.55 E-value=1.8e+02 Score=29.21 Aligned_cols=65 Identities=9% Similarity=-0.058 Sum_probs=53.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEe--cCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~ 162 (501)
.--+|-+|+.+++-.++..+.+..+..+|+-+... ||..+-++....|...+..+.-......+.
T Consensus 28 ~pl~G~~i~~~~hl~~~Ta~l~~~L~~~GA~v~~~~~np~stqd~vaaaL~~~gi~v~a~~~~~~~e 94 (406)
T TIGR00936 28 KPLKGARIAACLHVTVETAVLIETLVAGGAEVAWTSCNPLSTQDDVAAALAKAGIPVFAWRGETNEE 94 (406)
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCEEEEEccCCccccHHHHHHHHhCCceEEEecCCCHHH
Confidence 34479999999999999999999999999987766 888888899999998888866555444433
No 166
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=46.54 E-value=2e+02 Score=30.10 Aligned_cols=104 Identities=15% Similarity=0.078 Sum_probs=70.1
Q ss_pred CCCCcceEEeeccCCCCCcc--EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++..- .|.+|.. ..+|.+.+...+.... ...++.++|++..+.|-. ...+..+++.+..|+.++..
T Consensus 170 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~~~~~~~~~~---~~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~v~~ 244 (563)
T PLN02860 170 APDDAVLICFT--SGTTGRPKGVTISHSALIVQSLAKI---AIVGYGEDDVYLHTAPLCHIGGLSSALAMLMVGACHVLL 244 (563)
T ss_pred CCCCeEEEEec--CCCCCCCceEEeehHHHHHHHHHHH---hhcCCCCCCEEEEecCchhhccHHHHHHHHHcCceEEec
Confidence 45677766540 2333322 4678887765544433 245788999988888743 33334567788888887765
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
+...+..+...++..++..++.....+..+.+
T Consensus 245 -~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~ 276 (563)
T PLN02860 245 -PKFDAKAALQAIKQHNVTSMITVPAMMADLIS 276 (563)
T ss_pred -CCCCHHHHHHHHHHhCCeeEEeChHHHHHHHH
Confidence 56788899999999999999988776655543
No 167
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=46.39 E-value=1.4e+02 Score=28.17 Aligned_cols=69 Identities=14% Similarity=0.141 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCC----CHHHHHHHHHhcCceEEEEcCCC
Q 010774 85 DAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTL----GANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 85 ~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~----~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
.|+..+|+.|++. |-.|.+++......+.. .+...|..+..++-.. ..+++...++..+++++++|.-.
T Consensus 18 ~Rcl~LA~~l~~~----g~~v~f~~~~~~~~~~~--~i~~~g~~v~~~~~~~~~~~d~~~~~~~l~~~~~d~vV~D~y~ 90 (279)
T TIGR03590 18 MRCLTLARALHAQ----GAEVAFACKPLPGDLID--LLLSAGFPVYELPDESSRYDDALELINLLEEEKFDILIVDHYG 90 (279)
T ss_pred HHHHHHHHHHHHC----CCEEEEEeCCCCHHHHH--HHHHcCCeEEEecCCCchhhhHHHHHHHHHhcCCCEEEEcCCC
Confidence 5778899999775 44777777776665443 3467888777775432 35578888999999999999843
No 168
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=46.16 E-value=84 Score=31.15 Aligned_cols=60 Identities=15% Similarity=0.124 Sum_probs=37.2
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
.+...++++||.|++-.+. +.....++...|+.++.++.. .+.+++...+.. +.++|+..
T Consensus 62 ~l~al~~~pGd~Viv~~~t---~~~~~~~~~~~G~~~v~vd~d~~~~~~d~~~le~~i~~-~tk~Iip~ 126 (376)
T TIGR02379 62 AALLLDIQPGDEVIMPSYT---FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIESAITH-RTKAIVPV 126 (376)
T ss_pred HHHHcCCCCcCEEEECCCC---cHHHHHHHHHcCCEEEEEecCCCcCCCCHHHHHHhcCc-CceEEEEe
Confidence 3445578899988875543 444555667788887776543 355666665543 56666543
No 169
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=45.92 E-value=2.9e+02 Score=29.13 Aligned_cols=101 Identities=10% Similarity=-0.043 Sum_probs=65.6
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEEe
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPL 132 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l 132 (501)
++.++++... .|.+|. ...+|.+.+...+..+... .++.++|++...+|-.-. +...+++.+..|+.++.
T Consensus 198 ~~~~a~il~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~---~~l~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~v~- 271 (600)
T PRK08279 198 AKDTAFYIYT--SGTTGLPKAAVMSHMRWLKAMGGFGGL---LRLTPDDVLYCCLPLYHNTGGTVAWSSVLAAGATLAL- 271 (600)
T ss_pred ccccEEEEEc--CCCCCCCcEEEEeHHHHHHHHHHHHHh---cCCCCCcEEEEecCchhhhhHHHHHHHHHhcCcEEEE-
Confidence 4556665540 233332 2478888888777665544 578899999888876433 33345555666666554
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhh
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~ 163 (501)
.+..++..+...++..++..+.........+
T Consensus 272 ~~~~~~~~~~~~i~~~~~t~~~~~p~l~~~l 302 (600)
T PRK08279 272 RRKFSASRFWDDVRRYRATAFQYIGELCRYL 302 (600)
T ss_pred cCCCCHHHHHHHHHHhcceEEeehHHHHHHH
Confidence 5567888888899999998887655444433
No 170
>PRK10696 tRNA 2-thiocytidine biosynthesis protein TtcA; Provisional
Probab=45.87 E-value=2.3e+02 Score=26.29 Aligned_cols=72 Identities=13% Similarity=0.125 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhc------C--CEEEEecCC---CCHHHHHHHHHhcCceEE
Q 010774 86 AAIRFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQ------A--ITYVPLYDT---LGANAVEFIINHAEVSIA 153 (501)
Q Consensus 86 ~v~~~A~~L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~------G--~~~v~l~~~---~~~~~l~~~l~~~~~~~v 153 (501)
..+++.+.+.+.+ +.+||+|+|.+.-+.|+++++..+... + ..++-++.. +..+.+..+.+..+....
T Consensus 12 ~~~~v~~~i~~~~li~~~~kilVa~SGG~DS~~LL~ll~~l~~~~~~~~~l~av~vd~g~~~~~~~~~~~~~~~lgI~~~ 91 (258)
T PRK10696 12 LRRQVGQAIADFNMIEEGDRVMVCLSGGKDSYTLLDILLNLQKRAPINFELVAVNLDQKQPGFPEHVLPEYLESLGVPYH 91 (258)
T ss_pred HHHHHHHHHHHcCCCCCCCEEEEEecCCHHHHHHHHHHHHHHHhCCCCeEEEEEEecCCCCCCCHHHHHHHHHHhCCCEE
Confidence 3445555666654 578999999999999999887776442 2 344455543 334445666677777766
Q ss_pred EEcC
Q 010774 154 FVQE 157 (501)
Q Consensus 154 l~~~ 157 (501)
+.+.
T Consensus 92 v~~~ 95 (258)
T PRK10696 92 IEEQ 95 (258)
T ss_pred EEEe
Confidence 6543
No 171
>PRK08316 acyl-CoA synthetase; Validated
Probab=45.75 E-value=1.7e+02 Score=30.12 Aligned_cols=88 Identities=11% Similarity=-0.065 Sum_probs=67.8
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+.. .++..++++....|-... .+..+++++..|+..+.... ....+...+++.++..
T Consensus 35 ~~~Ty~~l~~~~~~~a~~L~~--~gi~~~~~V~l~~~~~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~i~~~l~~~~~~~ 111 (523)
T PRK08316 35 RSWTYAELDAAVNRVAAALLD--LGLKKGDRVAALGHNSDA-YALLWLACARAGAVHVPVNFMLTGEELAYILDHSGARA 111 (523)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecccccCHHHHHHHHHhCCCCE
Confidence 568889888888777665422 367888998888776653 34457889999999887764 7788889999999999
Q ss_pred EEecchHHHHHHH
Q 010774 316 FSGVPRVYDRIYT 328 (501)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (501)
++........+.+
T Consensus 112 ii~~~~~~~~~~~ 124 (523)
T PRK08316 112 FLVDPALAPTAEA 124 (523)
T ss_pred EEEccchHHHHHH
Confidence 9999887776654
No 172
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=45.41 E-value=2.1e+02 Score=27.25 Aligned_cols=62 Identities=10% Similarity=0.084 Sum_probs=44.1
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
.+.| +++|++|+=-.. .--=+...+.|...|.-++.+=|..-..+...+|+..++.+++++.
T Consensus 54 e~~G~l~pG~tIVE~TS-GNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~a~GAevi~t~~ 116 (300)
T COG0031 54 EKRGLLKPGGTIVEATS-GNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLRALGAEVILTPG 116 (300)
T ss_pred HHcCCCCCCCEEEEcCC-ChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEcCC
Confidence 3445 899995443333 3344455566667787777777766777778899999999999998
No 173
>PRK07638 acyl-CoA synthetase; Validated
Probab=45.30 E-value=3.5e+02 Score=27.53 Aligned_cols=87 Identities=10% Similarity=-0.025 Sum_probs=63.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
..+|.+.+...+...+ ...+++.+|++....+-.. -++...+..+..|+.++.. +..++.++...++..++.++.
T Consensus 161 v~~s~~~~~~~~~~~~---~~~~~~~~d~~~~~~~l~~~~~l~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~~t~~~ 236 (487)
T PRK07638 161 FLRAQQSWLHSFDCNV---HDFHMKREDSVLIAGTLVHSLFLYGAISTLYVGQTVHLM-RKFIPNQVLDKLETENISVMY 236 (487)
T ss_pred EEEecHHHHHHHHHHH---HhcCcCCCCEEEEeecchHHHHHHHHHHHHccCcEEEEc-CCCCHHHHHHHHHHcCCeEEE
Confidence 4677777766555443 3447889999888766443 3345666778889888765 567889999999999999999
Q ss_pred EcCCChhhhhhc
Q 010774 155 VQENKIPSILSC 166 (501)
Q Consensus 155 ~~~~~~~~~~~~ 166 (501)
.....+..+.+.
T Consensus 237 ~~P~~~~~l~~~ 248 (487)
T PRK07638 237 TVPTMLESLYKE 248 (487)
T ss_pred eCcHHHHHHHhC
Confidence 988777666554
No 174
>COG0796 MurI Glutamate racemase [Cell envelope biogenesis, outer membrane]
Probab=45.21 E-value=2.1e+02 Score=26.74 Aligned_cols=82 Identities=12% Similarity=0.182 Sum_probs=63.2
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcC
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 126 (501)
..+++..++-|+.-.+... |...-++-.+|=.++.+++.++..+|.++++ .+.++.-|+...++.-..=.+..
T Consensus 19 sVlrei~~~LP~e~~iY~~---D~a~~PYG~ks~e~I~~~~~~i~~~l~~~~i----k~lVIACNTASa~al~~LR~~~~ 91 (269)
T COG0796 19 SVLREIRRQLPDEDIIYVG---DTARFPYGEKSEEEIRERTLEIVDFLLERGI----KALVIACNTASAVALEDLREKFD 91 (269)
T ss_pred HHHHHHHHHCCCCcEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHcCC----CEEEEecchHHHHHHHHHHHhCC
Confidence 5677777899999999888 7777788889999999999999999999875 47777788776665554444555
Q ss_pred CEEEEecCC
Q 010774 127 ITYVPLYDT 135 (501)
Q Consensus 127 ~~~v~l~~~ 135 (501)
..++-+-|.
T Consensus 92 iPVvGviPa 100 (269)
T COG0796 92 IPVVGVIPA 100 (269)
T ss_pred CCEEEeccc
Confidence 555555453
No 175
>PRK06188 acyl-CoA synthetase; Validated
Probab=44.86 E-value=2.3e+02 Score=29.17 Aligned_cols=86 Identities=13% Similarity=-0.037 Sum_probs=63.6
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
..+|++.+...+.... ...++..+|++...+|-+-.+...+++.+..|+..+..+. ..++.+...++..++.+++.
T Consensus 186 v~~s~~~l~~~~~~~~---~~~~~~~~~~~l~~~pl~~~~g~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~~~ 261 (524)
T PRK06188 186 VMGTHRSIATMAQIQL---AEWEWPADPRFLMCTPLSHAGGAFFLPTLLRGGTVIVLAK-FDPAEVLRAIEEQRITATFL 261 (524)
T ss_pred eeeehHHHHHHHHHHH---hhcCCCcCcEEEEecCchhhhhHHHHHHHHcCCEEEEcCC-CCHHHHHHHHHHhCCEEEEe
Confidence 4678887776555333 3457888999998888765555667777888888877754 67888999999999999998
Q ss_pred cCCChhhhhh
Q 010774 156 QENKIPSILS 165 (501)
Q Consensus 156 ~~~~~~~~~~ 165 (501)
....+..+.+
T Consensus 262 ~P~~l~~l~~ 271 (524)
T PRK06188 262 VPTMIYALLD 271 (524)
T ss_pred hHHHHHHHHh
Confidence 7765554433
No 176
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=44.83 E-value=1.8e+02 Score=31.25 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=70.7
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.-..+ .+ ....+|...|......+...+. ..++..+|++...+|..--+ +..+++++..|+..+...
T Consensus 75 ~~~~A~~~~~~~-~~--~~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GDrV~i~~~n~~e~-~~~~lA~~~~Gav~vpl~ 148 (647)
T PTZ00237 75 RDQDALIYECPY-LK--KTIKLTYYQLYEKVCEFSRVLL--NLNISKNDNVLIYMANTLEP-LIAMLSCARIGATHCVLF 148 (647)
T ss_pred CCceEEEEEcCC-CC--ceEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCcEEEeeC
Confidence 456666543221 11 2357899999888888776542 23789999999999887432 335788899999987665
Q ss_pred C--CHHHHHHHHhhhcCcEEEecc
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVP 320 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P 320 (501)
. .+..+...++..+++++++..
T Consensus 149 ~~~~~~~l~~~l~~~~~~~li~~~ 172 (647)
T PTZ00237 149 DGYSVKSLIDRIETITPKLIITTN 172 (647)
T ss_pred CCCCHHHHHHHHHhcCCCEEEEcc
Confidence 4 889999999999999999865
No 177
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=44.47 E-value=97 Score=30.61 Aligned_cols=59 Identities=12% Similarity=0.026 Sum_probs=37.6
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
+...++++||.|.+-.+..+ ....++...|+.++.++.. .+.+++...+.. +.++|+..
T Consensus 63 l~~~~~~~Gd~Viv~~~t~~---~~~~~~~~~G~~~v~~d~d~~~~~~d~~~le~~i~~-~tk~i~~~ 126 (375)
T PRK11706 63 ALLLDIQPGDEVIMPSYTFV---STANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP-KTRAIVPV 126 (375)
T ss_pred HHHhCCCCCCEEEECCCCcH---HHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhcCC-CCeEEEEe
Confidence 33456789998887665544 3455667788887776532 456777776644 56666643
No 178
>PLN03052 acetate--CoA ligase; Provisional
Probab=44.36 E-value=1.9e+02 Score=31.66 Aligned_cols=100 Identities=15% Similarity=0.105 Sum_probs=73.0
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.+|++.-..+..+.+ ...+|...|...+..+...+. ..+...+|++...+|..- -.+..+++++..|+..+.+.
T Consensus 189 pd~~Ai~~~~e~~~~~~-~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GdrVai~~pn~~-e~via~LA~~~~Gav~vpi~ 264 (728)
T PLN03052 189 DDSIAIIWRDEGSDDLP-VNRMTLSELRSQVSRVANALD--ALGFEKGDAIAIDMPMNV-HAVIIYLAIILAGCVVVSIA 264 (728)
T ss_pred CCCeEEEEECCCCCCCc-eEEeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCCH-HHHHHHHHHHHcCCEEEeeC
Confidence 56777665433322222 356899999888887766542 237889999999998763 33445888999999988775
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
. .+..+...++..++.++++....
T Consensus 265 p~~~~~~l~~rl~~~~~k~lit~d~~ 290 (728)
T PLN03052 265 DSFAPSEIATRLKISKAKAIFTQDVI 290 (728)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 4 88999999999999999987654
No 179
>PLN00011 cysteine synthase
Probab=43.63 E-value=2.3e+02 Score=27.40 Aligned_cols=64 Identities=8% Similarity=0.079 Sum_probs=47.9
Q ss_pred HHhCC-CCCC-CEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRG-VNPG-DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~g-v~~g-d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
..+.| +.+| +.|+. ...+-.-..+.++|..+|..+..+-|...+......++..++.+++++..
T Consensus 59 a~~~g~~~~g~~~vv~-aSsGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~i~~~GA~V~~~~~~ 124 (323)
T PLN00011 59 AEDKGLITPGKSTLIE-ATAGNTGIGLACIGAARGYKVILVMPSTMSLERRIILRALGAEVHLTDQS 124 (323)
T ss_pred HHHcCCCCCCCcEEEE-eCCChHHHHHHHHHHHcCCeEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 34444 6777 55554 55555666677788889999888877776778888999999999999864
No 180
>PLN02736 long-chain acyl-CoA synthetase
Probab=43.13 E-value=2.3e+02 Score=30.38 Aligned_cols=88 Identities=6% Similarity=-0.035 Sum_probs=67.2
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+......++..+ ...++..+|++...++-..-+ ....++++..|+.++.+.. .+..+...++..++++
T Consensus 77 ~~lTy~el~~~v~~lA~~L--~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ 153 (651)
T PLN02736 77 KWMTYGEAGTARTAIGSGL--VQHGIPKGACVGLYFINRPEW-LIVDHACSAYSYVSVPLYDTLGPDAVKFIVNHAEVAA 153 (651)
T ss_pred EEEEHHHHHHHHHHHHHHH--HHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEeecCCCHHHHHHHHhccCCCE
Confidence 4579998888887776644 223788999998887776432 2346788899999886654 8899999999999999
Q ss_pred EEecchHHHHHHH
Q 010774 316 FSGVPRVYDRIYT 328 (501)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (501)
+++.+..+..+..
T Consensus 154 l~~~~~~~~~~~~ 166 (651)
T PLN02736 154 IFCVPQTLNTLLS 166 (651)
T ss_pred EEECHHHHHHHHH
Confidence 9998877666544
No 181
>PLN02249 indole-3-acetic acid-amido synthetase
Probab=42.90 E-value=14 Score=38.86 Aligned_cols=30 Identities=27% Similarity=0.312 Sum_probs=25.1
Q ss_pred CCCCCeEEEEecCCCC-CCCceEEeecHHHH
Q 010774 217 KKKTNISTIMYTSGTT-GEPKGVVLTNQAIV 246 (501)
Q Consensus 217 ~~~~~~~~i~~TSGtT-G~PK~v~~sh~~l~ 246 (501)
..++.+.+..-||||| |.+|-+.+|...+-
T Consensus 97 L~~~pi~~f~~SSGTT~g~~K~IP~T~~~l~ 127 (597)
T PLN02249 97 LSSHPITEFLTSSGTSAGERKLMPTIEEDID 127 (597)
T ss_pred eCCCchhhhcccCCCCCCceeEEeccHHHHH
Confidence 3456778899999999 89999999997664
No 182
>PLN03102 acyl-activating enzyme; Provisional
Probab=42.87 E-value=1.5e+02 Score=31.17 Aligned_cols=85 Identities=8% Similarity=-0.013 Sum_probs=65.2
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+...+..+...+. ..++..+|++...+|-.- -....+++++..|+.++.... ....+...++..+++.+
T Consensus 39 ~~Ty~eL~~~~~~~a~~L~--~~Gl~~gd~Vai~~~n~~-e~~~~~la~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~i 115 (579)
T PLN03102 39 RFTWPQTYDRCCRLAASLI--SLNITKNDVVSVLAPNTP-AMYEMHFAVPMAGAVLNPINTRLDATSIAAILRHAKPKIL 115 (579)
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcH-HHHHHHHHHHhcCcEEeeccccCCHHHHHHHHhccCCeEE
Confidence 5899998888877766542 236788999999888653 223357788999999887765 88999999999999999
Q ss_pred EecchHHHHH
Q 010774 317 SGVPRVYDRI 326 (501)
Q Consensus 317 ~~~P~~~~~l 326 (501)
++.+.....+
T Consensus 116 i~~~~~~~~~ 125 (579)
T PLN03102 116 FVDRSFEPLA 125 (579)
T ss_pred EEChhhHHHH
Confidence 9877665444
No 183
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=42.84 E-value=85 Score=30.85 Aligned_cols=65 Identities=18% Similarity=0.138 Sum_probs=43.2
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
..+-..|..+|+++||.|++-.- -+....-|+..+|+.++.++-. .+++.+...+..- .++|+..
T Consensus 51 ~Al~~al~~l~~~~gdeVi~p~~---t~~~~~~ai~~~G~~pv~~Di~~~~~~id~~~~~~~i~~~-t~ai~~~ 120 (363)
T PF01041_consen 51 SALHLALRALGLGPGDEVIVPAY---TFPATASAILWAGAEPVFVDIDPETLNIDPEALEKAITPK-TKAILVV 120 (363)
T ss_dssp HHHHHHHHHTTGGTTSEEEEESS---S-THHHHHHHHTT-EEEEE-BETTTSSB-HHHHHHHHHTT-EEEEEEE
T ss_pred HHHHHHHHhcCCCcCceEecCCC---cchHHHHHHHHhccEEEEEeccCCcCCcCHHHHHHHhccC-ccEEEEe
Confidence 34555677789999999888644 4556778888999999888643 5777888776543 3555554
No 184
>PRK09274 peptide synthase; Provisional
Probab=42.63 E-value=1.3e+02 Score=31.42 Aligned_cols=99 Identities=10% Similarity=0.049 Sum_probs=68.1
Q ss_pred CCCeEEEEecCCCC-CCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 219 KTNISTIMYTSGTT-GEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 219 ~~~~~~i~~TSGtT-G~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
++.++++....++. ...+...+|...+...+..+...+. ..++..+|++....+-... ....+++++..|+..+..
T Consensus 20 p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~--~~g~~~gd~V~~~~~n~~~-~~~~~la~~~~G~~~v~l 96 (552)
T PRK09274 20 PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLN--AAGIGRGMRAVLMVTPSLE-FFALTFALFKAGAVPVLV 96 (552)
T ss_pred CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCcHH-HHHHHHHHHHcCeEEEEc
Confidence 45566654332221 2223336899998888877766542 2367889999988876533 233578889999998877
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecc
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVP 320 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P 320 (501)
.. ....+...+++.++..++..+
T Consensus 97 ~~~~~~~~l~~~l~~~~~~~~i~~~ 121 (552)
T PRK09274 97 DPGMGIKNLKQCLAEAQPDAFIGIP 121 (552)
T ss_pred CCCccHHHHHHHHHhcCCCEEEecc
Confidence 64 677888889999999988765
No 185
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=42.54 E-value=2.2e+02 Score=29.56 Aligned_cols=102 Identities=14% Similarity=-0.018 Sum_probs=69.3
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .+..|. ...+|++.+...+...... .++.++|++....|-. ..++..+++.+..|+.++.
T Consensus 188 ~~~~~a~i~~T--SGtTG~PK~v~~s~~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~ 262 (546)
T PRK08314 188 GPDDLAVLPYT--SGTTGVPKGCMHTHRTVMANAVGSVLW---SNSTPESVVLAVLPLFHVTGMVHSMNAPIYAGATVVL 262 (546)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEecHHHHHHHHHHHHh---hCCCCCceEEEEcCchHHHHHHHHHHHHHHcCCeEEe
Confidence 45667766540 222222 2477888887766554443 3578899988777743 2344567788999998888
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~ 163 (501)
.+ ..++..+...++..++..+......+..+
T Consensus 263 ~~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l 293 (546)
T PRK08314 263 MP-RWDREAAARLIERYRVTHWTNIPTMVVDF 293 (546)
T ss_pred cC-CCCHHHHHHHHHHhcCceecccHHHHHHH
Confidence 75 46788888999999999888766655444
No 186
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=41.88 E-value=1.9e+02 Score=30.95 Aligned_cols=98 Identities=11% Similarity=0.117 Sum_probs=71.9
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++..... ......+|...+......+...+. ..+...+|++...+|-.-- .+..+++++..|+..+...
T Consensus 81 p~~~Al~~~~~~---~~~~~~lTy~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~l~ 154 (637)
T PRK00174 81 GDKVAIIWEGDD---PGDSRKITYRELHREVCRFANALK--SLGVKKGDRVAIYMPMIPE-AAVAMLACARIGAVHSVVF 154 (637)
T ss_pred CCCeEEEEECCC---CCceEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecC
Confidence 577777653211 113467899999998888776542 2377899999998887643 2335788999999988776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
. .+..+...++..++..+++....
T Consensus 155 ~~~~~~~l~~~l~~~~~~~li~~~~~ 180 (637)
T PRK00174 155 GGFSAEALADRIIDAGAKLVITADEG 180 (637)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEcCcc
Confidence 4 78899999999999999987653
No 187
>TIGR01136 cysKM cysteine synthases. This model discriminates cysteine synthases (EC 2.5.1.47) (both CysK and CysM) from cystathionine beta-synthase, a protein found primarily in eukaryotes and carrying a C-terminal CBS domain lacking from this protein. Bacterial proteins lacking the CBS domain but otherwise showing resemblamnce to cystathionine beta-synthases and considerable phylogenetic distance from known cysteine synthases were excluded from the seed and score below the trusted cutoff.
Probab=41.36 E-value=2.6e+02 Score=26.58 Aligned_cols=64 Identities=9% Similarity=0.086 Sum_probs=46.4
Q ss_pred HHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.+.| +.+|+.|+ ....+-.-..+.++|.+.|..+..+-|...+......++..++++++++..
T Consensus 49 a~~~g~~~~g~~vv-~aSsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~v~~~~~~ 113 (299)
T TIGR01136 49 AEKRGLLKPGDTII-EATSGNTGIALAMVAAAKGYKLILTMPETMSLERRKLLRAYGAELILTPAE 113 (299)
T ss_pred HHHcCCCCCCCEEE-EeCCChHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 34445 47788764 444444555666677889998888877766677778899999999999865
No 188
>PRK00865 glutamate racemase; Provisional
Probab=41.08 E-value=2e+02 Score=26.81 Aligned_cols=61 Identities=13% Similarity=0.189 Sum_probs=49.7
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 114 (501)
.++++..+..|+...+.+. |....++-..|-.|+.+++.+++..|.+.|+ ...++.-|+..
T Consensus 19 tvl~~i~~~lp~~~~iY~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~g~----d~iVIaCNTa~ 79 (261)
T PRK00865 19 TVLREIRRLLPDEHIIYVG---DTARFPYGEKSEEEIRERTLEIVEFLLEYGV----KMLVIACNTAS 79 (261)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHhCCC----CEEEEeCchHH
Confidence 5667777789999999888 8887888889999999999999999998765 35566666654
No 189
>PRK06839 acyl-CoA synthetase; Validated
Probab=41.01 E-value=2.2e+02 Score=29.00 Aligned_cols=88 Identities=7% Similarity=-0.070 Sum_probs=66.0
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|+..+......+...+.. ..++..++++....+-... ....+++++..|+..+.... .+..+...+++.+++.
T Consensus 26 ~~~ty~~l~~~~~~la~~L~~-~~g~~~~~~V~i~~~~~~~-~~~~~la~~~~G~~~~~~~~~~~~~~~~~~l~~~~~~~ 103 (496)
T PRK06839 26 EEMTYKQLHEYVSKVAAYLIY-ELNVKKGERIAILSQNSLE-YIVLLFAIAKVECIAVPLNIRLTENELIFQLKDSGTTV 103 (496)
T ss_pred ceEEHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEEecCcccCHHHHHHHHHhcCceE
Confidence 578999998888877664411 1257788998888777633 33457888999999887764 7788888899999999
Q ss_pred EEecchHHHHHH
Q 010774 316 FSGVPRVYDRIY 327 (501)
Q Consensus 316 ~~~~P~~~~~l~ 327 (501)
++..+.....+.
T Consensus 104 i~~~~~~~~~~~ 115 (496)
T PRK06839 104 LFVEKTFQNMAL 115 (496)
T ss_pred EEEcHHHHHHHH
Confidence 999887765543
No 190
>cd01519 RHOD_HSP67B2 Member of the Rhodanese Homology Domain superfamily. This CD includes the heat shock protein 67B2 of Drosophila melanogaster and other similar proteins, many of which are uncharacterized.
Probab=40.59 E-value=1e+02 Score=23.62 Aligned_cols=53 Identities=13% Similarity=0.014 Sum_probs=38.5
Q ss_pred EEeeHHHHHHH----HHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 76 VWLTYQEVYDA----AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 76 ~~~Ty~el~~~----v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
..+.+.++... ...+...+...++.+++.|++++.+......+...+...|..
T Consensus 36 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv~c~~g~~s~~~~~~l~~~G~~ 92 (106)
T cd01519 36 INIPLSSLPDALALSEEEFEKKYGFPKPSKDKELIFYCKAGVRSKAAAELARSLGYE 92 (106)
T ss_pred EEechHHhhhhhCCCHHHHHHHhcccCCCCCCeEEEECCCcHHHHHHHHHHHHcCCc
Confidence 45667666443 235666676778888899999999988777777778888863
No 191
>PRK10717 cysteine synthase A; Provisional
Probab=40.50 E-value=2.5e+02 Score=27.17 Aligned_cols=62 Identities=13% Similarity=0.135 Sum_probs=46.1
Q ss_pred hCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 96 ~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.| +++|+.|+. ...+-.-..+.++|..+|..+..+-|...+......++..++++++++..
T Consensus 57 ~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~vv~p~~~~~~k~~~~~~~GA~V~~~~~~ 119 (330)
T PRK10717 57 KRGLLKPGGTIVE-GTAGNTGIGLALVAAARGYKTVIVMPETQSQEKKDLLRALGAELVLVPAA 119 (330)
T ss_pred HcCCCCCCCEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEeCCc
Confidence 344 467777655 44445555666777889998887777777777888999999999999864
No 192
>TIGR00067 glut_race glutamate racemase. The most closely related proteins differing in function are aspartate racemases.
Probab=40.49 E-value=2.3e+02 Score=26.19 Aligned_cols=61 Identities=11% Similarity=0.165 Sum_probs=50.4
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchh
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~ 114 (501)
.++++..+..|+...+.+. |...-++-..|-.++.+++.+.+..|. +.|+ ...++.-|+..
T Consensus 12 tv~~~l~~~~p~~~~iy~~---D~~~~PYG~ks~~~i~~~~~~~~~~L~~~~g~----d~ivIaCNTA~ 73 (251)
T TIGR00067 12 SVLKEIRKQLPKEHYIYVG---DTKRFPYGEKSPEFILEYVLELLTFLKERHNI----KLLVVACNTAS 73 (251)
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHhCCC----CEEEEeCchHH
Confidence 4567777789999998888 887778888999999999999999999 8776 35666667765
No 193
>PRK05852 acyl-CoA synthetase; Validated
Probab=40.30 E-value=4.4e+02 Score=27.25 Aligned_cols=87 Identities=11% Similarity=-0.059 Sum_probs=61.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch--hHHHHHHHHHhcCCEEEE-ecCCCCHHHHHHHHHhcCceE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP--EWIIAMEACNSQAITYVP-LYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~--~~~~~~lA~~~~G~~~v~-l~~~~~~~~l~~~l~~~~~~~ 152 (501)
..+|++.+...+..+...+ +++++|++....|..- .+...+++++..|..++. -....++..+...++..++..
T Consensus 194 v~~~~~~~~~~~~~~~~~~---~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~i~~~~~t~ 270 (534)
T PRK05852 194 VPWTHANIASSVRAIITGY---RLSPRDATVAVMPLYHGHGLIAALLATLASGGAVLLPARGRFSAHTFWDDIKAVGATW 270 (534)
T ss_pred EEecHHHHHHHHHHHHHHh---CCCCcceEEEecCcchhHHHHHHHHHHHhcCCeEEeCCCcCcCHHHHHHHHHHcCCcE
Confidence 4568888877666655444 6788998888877543 455567777777776553 233567888888999999999
Q ss_pred EEEcCCChhhhhh
Q 010774 153 AFVQENKIPSILS 165 (501)
Q Consensus 153 vl~~~~~~~~~~~ 165 (501)
++.....+..+.+
T Consensus 271 ~~~~P~~~~~l~~ 283 (534)
T PRK05852 271 YTAVPTIHQILLE 283 (534)
T ss_pred EEcChHHHHHHHh
Confidence 9888776665544
No 194
>COG2236 Predicted phosphoribosyltransferases [General function prediction only]
Probab=40.29 E-value=57 Score=28.75 Aligned_cols=32 Identities=16% Similarity=0.421 Sum_probs=27.5
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGI 107 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i 107 (501)
..+||.++++.+.++|..+.+.|.+|.-.|++
T Consensus 5 ~~vSw~~I~~~~~~lA~kI~~s~~~PDvIiai 36 (192)
T COG2236 5 LYVSWEEIHRLCRALAEKIRASGFKPDVIVAI 36 (192)
T ss_pred EEecHHHHHHHHHHHHHHHHHcCCCCCEEEEE
Confidence 57999999999999999999999988554444
No 195
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=40.26 E-value=1.7e+02 Score=30.56 Aligned_cols=97 Identities=12% Similarity=0.030 Sum_probs=69.9
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++..-. +.++...+|...+......+...+. ..++..+|++...++-...+ ...+++++..|+..+...
T Consensus 38 p~~~A~~~~~~---~~~~~~~~Ty~el~~~~~~~a~~L~--~~g~~~g~~Val~~~n~~e~-~~~~la~~~~G~~~vpl~ 111 (547)
T PRK13295 38 PDKTAVTAVRL---GTGAPRRFTYRELAALVDRVAVGLA--RLGVGRGDVVSCQLPNWWEF-TVLYLACSRIGAVLNPLM 111 (547)
T ss_pred CCceEEEecCC---CccccceeeHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCChHH-HHHHHHHHhcCcEEeccc
Confidence 46667665322 2333457899999888877766542 23678899999888876543 345788899999988665
Q ss_pred C--CHHHHHHHHhhhcCcEEEecch
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (501)
. ....+...++..++..+.+...
T Consensus 112 ~~~~~~~l~~~l~~~~~~~li~~~~ 136 (547)
T PRK13295 112 PIFRERELSFMLKHAESKVLVVPKT 136 (547)
T ss_pred cccCHHHHHHHHHhcCceEEEEecc
Confidence 4 7788889999999999887664
No 196
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=39.97 E-value=2.8e+02 Score=29.76 Aligned_cols=88 Identities=15% Similarity=-0.041 Sum_probs=58.7
Q ss_pred hCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC-----
Q 010774 96 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCL----- 167 (501)
Q Consensus 96 ~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~----- 167 (501)
..+++++|++..+.+.+......+++.+..|++++..+. ..+++.+..+++..++..+.+....+..+....
T Consensus 299 ~~~~~~~d~~~~~~~~~~~~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~ 378 (655)
T PRK03584 299 HCDLGPGDRFFWYTTCGWMMWNWLVSGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLVPGE 378 (655)
T ss_pred hcCCCCCCEEEEcCCchHHhHHHHHHHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCCccc
Confidence 347889998877766655444456788999999887753 246788899999999998887765554443211
Q ss_pred ccCCCCccEEEEecCC
Q 010774 168 PRCCLYLKTIVSFANV 183 (501)
Q Consensus 168 ~~~~~~~~~v~~~~~~ 183 (501)
...+..++.++..+..
T Consensus 379 ~~~l~sLr~i~~~Ge~ 394 (655)
T PRK03584 379 THDLSALRTIGSTGSP 394 (655)
T ss_pred cCChhheEEEEEecCC
Confidence 1123456666555543
No 197
>cd01449 TST_Repeat_2 Thiosulfate sulfurtransferase (TST), C-terminal, catalytic domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the second repeat. Only the second repeat contains the catalytically active Cys residue.
Probab=39.61 E-value=73 Score=25.10 Aligned_cols=41 Identities=10% Similarity=0.108 Sum_probs=32.8
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
..+...+...|+.+++.|++++..+.....+.+.+..+|..
T Consensus 64 ~~~~~~~~~~~~~~~~~iv~yc~~g~~s~~~~~~l~~~G~~ 104 (118)
T cd01449 64 EELRALFAALGITPDKPVIVYCGSGVTACVLLLALELLGYK 104 (118)
T ss_pred HHHHHHHHHcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 45566677889999999999999887777777778888863
No 198
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=39.55 E-value=2.2e+02 Score=30.63 Aligned_cols=96 Identities=15% Similarity=0.119 Sum_probs=70.9
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC
Q 010774 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG 299 (501)
Q Consensus 220 ~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~ 299 (501)
+.++++.... +|. ...+|...|...+..++..+. ..++..+|++...+|..-- ....+++++..|+..+....
T Consensus 99 ~~~a~~~~~~--~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~GdrV~i~~~n~~e-~~~~~lA~~~~Gav~vp~~~ 171 (652)
T TIGR01217 99 TEPALLYVDE--THE--PAPVTWAELRRQVASLAAALR--ALGVRPGDRVSGYLPNIPQ-AVVAMLATASVGAIWSSCSP 171 (652)
T ss_pred CCeEEEEECC--CCC--eeEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHH-HHHHHHHHHHhCeEEEecCC
Confidence 4566655432 222 356899999998888777552 3378899999999988743 33457888999998877654
Q ss_pred --CHHHHHHHHhhhcCcEEEecchH
Q 010774 300 --DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 300 --~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
....+...+++.++..+++....
T Consensus 172 ~~~~~~l~~~l~~~~~k~li~~~~~ 196 (652)
T TIGR01217 172 DFGARGVLDRFQQIEPKLLFTVDGY 196 (652)
T ss_pred CCCHHHHHHHHHhcCCcEEEEcccc
Confidence 78899999999999999886543
No 199
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=39.30 E-value=3.7e+02 Score=27.48 Aligned_cols=103 Identities=15% Similarity=-0.024 Sum_probs=69.2
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++..- .+.++. ...+|++.+...+.... ....+++++|++....|-... +...+++.+..|+.++.
T Consensus 159 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~~~~~~~~~~--~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~~~ 234 (508)
T TIGR02262 159 QADDPAFWLYS--SGSTGMPKGVVHTHSNPYWTAELYA--RNTLGIREDDVVFSAAKLFFAYGLGNALTFPMSVGATTVL 234 (508)
T ss_pred CCCCcEEEEeC--CCCCCCCcEEEEechhHHHHHHHHh--HHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHcCceEEE
Confidence 35666665540 222222 24678888876554322 234488999998887775543 33456677888988888
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPS 162 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~ 162 (501)
.+...++..+...++..++..++.....+..
T Consensus 235 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~ 265 (508)
T TIGR02262 235 MGERPTPDAVFDRLRRHQPTIFYGVPTLYAA 265 (508)
T ss_pred eCCCCCHHHHHHHHHHHCCcEEecchHHHHH
Confidence 7777788899999999999999887754443
No 200
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=39.12 E-value=2.2e+02 Score=30.24 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=72.2
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
.++.++++.... .+|. ...+|...+......+...+. ..++..+|++...+|..- -.+..+++++..|+..+..
T Consensus 70 ~p~~~Al~~~~~-~~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~-e~~~~~lA~~~~Gav~v~i 143 (625)
T TIGR02188 70 RPDKVAIIWEGD-EPGE--VRKITYRELHREVCRFANVLK--SLGVKKGDRVAIYMPMIP-EAAIAMLACARIGAIHSVV 143 (625)
T ss_pred CCCCeEEEEEcC-CCCc--eEEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCCEEecc
Confidence 356777765322 1222 456899999888877766542 237889999999988764 2344578899999998876
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecchH
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
.. .+..+...++..+++.+++....
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 170 (625)
T TIGR02188 144 FGGFSAEALADRINDAGAKLVITADEG 170 (625)
T ss_pred CCCCCHHHHHHHHHhcCCCEEEEcCcc
Confidence 54 88899999999999999887653
No 201
>PLN02654 acetate-CoA ligase
Probab=38.91 E-value=2.1e+02 Score=30.93 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=71.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.+|++.... ..+ ....+|...|......+...+ ...+...+|++...+|..-- .+..+++++..|+..+...
T Consensus 103 ~~~~Al~~~~~-~~~--~~~~~Ty~eL~~~v~~lA~~L--~~~Gv~~GdrV~i~~pn~~e-~v~a~lA~~~~Gav~vpv~ 176 (666)
T PLN02654 103 GDKIAIYWEGN-EPG--FDASLTYSELLDRVCQLANYL--KDVGVKKGDAVVIYLPMLME-LPIAMLACARIGAVHSVVF 176 (666)
T ss_pred CCCEEEEEEcC-CCC--ceEEEeHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEecC
Confidence 46667654222 111 235689999988888776654 22378899999999888642 2335788899999987765
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
. .+..+...++..++..+++....
T Consensus 177 ~~~~~~~l~~~l~~~~~~~li~~~~~ 202 (666)
T PLN02654 177 AGFSAESLAQRIVDCKPKVVITCNAV 202 (666)
T ss_pred CCCCHHHHHHHHHhcCceEEEEcCcc
Confidence 4 88999999999999999987654
No 202
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=38.74 E-value=3.2e+02 Score=28.70 Aligned_cols=105 Identities=14% Similarity=-0.034 Sum_probs=67.9
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++..- .+.+|. ...+|++.+...+..+. .....++.++|++...+|-.-. .....++.+..|..++..
T Consensus 179 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~l~~g~~~~~~ 255 (576)
T PRK05620 179 DETTAAAICYS--TGTTGAPKGVVYSHRSLYLQSLSLR-TTDSLAVTHGESFLCCVPIYHVLSWGVPLAAFMSGTPLVFP 255 (576)
T ss_pred CccceeEEEEC--CCCCCCCceEEEEcHHHHHHHHHhh-hhhhcCCCCCCeEEEeCChHHhhhhHHHHHHHhcCceEEec
Confidence 34566665540 222232 23678887754433321 1223578899999888875433 234557778888888776
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhh
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~ 163 (501)
.+..+++.+...++..++..++.....+..+
T Consensus 256 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l 286 (576)
T PRK05620 256 GPDLSAPTLAKIIATAMPRVAHGVPTLWIQL 286 (576)
T ss_pred CCCCCHHHHHHHHHHhcCceeeecCHHHHHH
Confidence 6677899999999999999998876655443
No 203
>TIGR01138 cysM cysteine synthase B. Alternate name: O-acetylserine (thiol)-lyase
Probab=38.67 E-value=3.3e+02 Score=25.75 Aligned_cols=63 Identities=13% Similarity=0.082 Sum_probs=46.2
Q ss_pred HHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 94 L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
..+.| +.+|+.|+. ...+-.-....++|.+.|..+..+-|...+......++..++++++++.
T Consensus 50 a~~~g~~~~g~~vv~-aSsGN~g~alA~~a~~~G~~~~i~~p~~~~~~k~~~~~~~GA~v~~v~~ 113 (290)
T TIGR01138 50 AEKRGEIKPGDVLIE-ATSGNTGIALAMIAALKGYRMKLLMPDNMSQERKAAMRAYGAELILVTK 113 (290)
T ss_pred HHHcCCCCCCCEEEE-ECCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCC
Confidence 33445 477877655 4444455566677888999888887777667777889999999999875
No 204
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=38.51 E-value=2.6e+02 Score=32.89 Aligned_cols=123 Identities=9% Similarity=0.013 Sum_probs=78.7
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH-HHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI-IAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~-~~~lA~~~~G~~~v~l 132 (501)
.|+.+|++..- .|.+|. ...+|.+.+...+.... ...++.++|++....+-+.+.- .-+++.+..|+..+..
T Consensus 596 ~~~~~a~i~~T--SGSTG~PKgV~~~h~~l~~~~~~~~---~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 596 QPHHTAYIIFT--SGSTGRPKGVMVGQTAIVNRLLWMQ---NHYPLTADDVVLQKTPCSFDVSVWEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEeccHHHHHHHHHHH---HhcCCCCCCEEEEeCCcchhhhHHHHHHHHhCCCEEEEC
Confidence 46667766540 222222 24678877765544333 3458899999999888765543 3467778899998877
Q ss_pred cC--CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc-----CCCCccEEEEecCC
Q 010774 133 YD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~--~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~ 183 (501)
++ ..+++.+...++..++..+......+..+.+.... .+..++.++.-+..
T Consensus 671 ~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 728 (1296)
T PRK10252 671 EPEAHRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEGARQSCASLRQVFCSGEA 728 (1296)
T ss_pred ChhccCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhccccccccCCCccEEEEecCC
Confidence 65 45788899999999999988776655544333211 22456666555443
No 205
>KOG1794 consensus N-Acetylglucosamine kinase [Carbohydrate transport and metabolism]
Probab=38.43 E-value=46 Score=31.18 Aligned_cols=75 Identities=16% Similarity=0.046 Sum_probs=51.1
Q ss_pred ceeEEEEecCCC--CHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCC
Q 010774 384 RLQAMLSGAAPL--PIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALS 461 (501)
Q Consensus 384 ~lr~~~~gG~~~--~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~ 461 (501)
+|-.-++|++-- ...+.++|+..|+-..-+.|=++++-+......+.... |.+=..-.|+..+.++ +||.+..++
T Consensus 70 ~lgL~lSg~d~e~~~~~lv~~~R~~fps~ae~~~v~sDa~~sl~a~t~g~~~--GiVLiaGTgs~crl~~-~DGs~~~~g 146 (336)
T KOG1794|consen 70 SLGLGLSGTDQEDKNRKLVTEFRDKFPSVAENFYVTSDADGSLAAATPGGEG--GIVLIAGTGSNCRLVN-PDGSEKGAG 146 (336)
T ss_pred eeeeecccCCchhHHHHHHHHHHHhccchhheeeeehhHHHHHhhcCCCCCC--cEEEEecCCceeEEEC-CCCCccCCC
Confidence 566667777654 45788999999877777899999987655444332211 3333344677889999 999876665
No 206
>PF06543 Lac_bphage_repr: Lactococcus bacteriophage repressor; InterPro: IPR009498 This entry represents the C terminus of various Lactococcus bacteriophage repressor proteins.
Probab=38.40 E-value=25 Score=22.71 Aligned_cols=26 Identities=23% Similarity=0.284 Sum_probs=21.9
Q ss_pred eEEEEecCCCCHHHHHHHHHhhCCCe
Q 010774 386 QAMLSGAAPLPIHVEEFLRVTSGAPL 411 (501)
Q Consensus 386 r~~~~gG~~~~~~~~~~~~~~~~~~l 411 (501)
+.+-++|.|++.+..+.++..|+-++
T Consensus 22 ~wvSf~GrPltdevK~a~k~i~~~~l 47 (49)
T PF06543_consen 22 KWVSFDGRPLTDEVKEAMKLIFGKRL 47 (49)
T ss_pred HheeeCCeeCCHHHHHHHHHHHhhhc
Confidence 56889999999999999998876443
No 207
>PRK06164 acyl-CoA synthetase; Validated
Probab=38.27 E-value=1.6e+02 Score=30.59 Aligned_cols=104 Identities=15% Similarity=0.096 Sum_probs=72.5
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++..- .+..|. ...+|.+.+...+..++..+ ++.++|++...+|.+ .-.+..+++++..|+.++..
T Consensus 179 ~~~~~~~i~~T--SGtTG~pK~v~~s~~~l~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 253 (540)
T PRK06164 179 DPDAGALLFTT--SGTTSGPKLVLHRQATLLRHARAIARAY---GYDPGAVLLAALPFCGVFGFSTLLGALAGGAPLVCE 253 (540)
T ss_pred CCCceEEEEEC--CCCCCCCcEEEEehHHHHHHHHHHHHhc---CCCCCCEEEEcCCchhHHHHHHHHHHHhcCceEEec
Confidence 35677777640 222222 24678888877666555554 678999999888853 33345678888888887765
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
+......+...++..++..++.....+..+.+
T Consensus 254 -~~~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~ 285 (540)
T PRK06164 254 -PVFDAARTARALRRHRVTHTFGNDEMLRRILD 285 (540)
T ss_pred -CCCCHHHHHHHHHHhCCeeecCCHHHHHHHHH
Confidence 45678889999999999999887766655544
No 208
>COG2351 Transthyretin-like protein [General function prediction only]
Probab=37.94 E-value=47 Score=26.39 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=15.7
Q ss_pred CcccccccCeEEEEeecCCC
Q 010774 436 GTVGVPMTTVEARLESVPEM 455 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~ 455 (501)
...|+|.+|++|.+..+++.
T Consensus 18 ta~GkPAagv~V~L~rl~~~ 37 (124)
T COG2351 18 TASGKPAAGVKVELYRLEGN 37 (124)
T ss_pred cccCCcCCCCEEEEEEecCC
Confidence 46899999999998874433
No 209
>TIGR03595 Obg_CgtA_exten Obg family GTPase CgtA, C-terminal extension. CgtA (see model TIGR02729) is a broadly conserved member of the obg family of GTPases associated with ribosome maturation. This model represents a unique C-terminal domain found in some but not all sequences of CgtA. This region is preceded, and may be followed, by a region of low-complexity sequence.
Probab=37.91 E-value=39 Score=24.15 Aligned_cols=19 Identities=32% Similarity=0.459 Sum_probs=15.2
Q ss_pred HHHHHHhCCCCCCCEEEEE
Q 010774 90 FGSAMRSRGVNPGDRCGIY 108 (501)
Q Consensus 90 ~A~~L~~~gv~~gd~V~i~ 108 (501)
+-..|++.|++.||.|.|.
T Consensus 45 v~~~L~~~G~~~GD~V~Ig 63 (69)
T TIGR03595 45 VEDALRKAGAKDGDTVRIG 63 (69)
T ss_pred HHHHHHHcCCCCCCEEEEc
Confidence 4456788899999999874
No 210
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=37.90 E-value=2.3e+02 Score=29.44 Aligned_cols=88 Identities=11% Similarity=-0.010 Sum_probs=59.7
Q ss_pred EEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
..+|.+.+.... .+..+. ..++.++|++..+.|-.-. ....+++++..|+.++...+...++.+...++..++..+
T Consensus 194 v~~s~~~~~~~~--~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~l~~~~vt~~ 271 (539)
T PRK07008 194 ALYSHRSTVLHA--YGAALPDAMGLSARDAVLPVVPMFHVNAWGLPYSAPLTGAKLVLPGPDLDGKSLYELIEAERVTFS 271 (539)
T ss_pred EEEecHHHHHHH--HHhhcccccCCCCCceEEecCchHHhhhHHHHHHHHhcCceEEEecCCcCHHHHHHHHHHcCCEEE
Confidence 366766654322 222222 3478889998877764322 233446778899988877777889999999999999998
Q ss_pred EEcCCChhhhhh
Q 010774 154 FVQENKIPSILS 165 (501)
Q Consensus 154 l~~~~~~~~~~~ 165 (501)
......+..+.+
T Consensus 272 ~~~P~~~~~l~~ 283 (539)
T PRK07008 272 AGVPTVWLGLLN 283 (539)
T ss_pred EechHHHHHHHh
Confidence 877665554443
No 211
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=37.88 E-value=4.6e+02 Score=27.32 Aligned_cols=109 Identities=17% Similarity=0.116 Sum_probs=75.7
Q ss_pred CCCCcceEEeeccCCCCC--ccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVG--PYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~--~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++.. - .|.++ --..+|++.+...+..+...+... +.+.|++...+|- ..-+...+++.+..|+..+.
T Consensus 169 ~~~d~a~i~y-T-SGTTG~PKgv~~th~~~~~~~~~~~~~~~~~-~~~~d~~l~~lPl~H~~Gl~~~~~~~~~~G~~~v~ 245 (534)
T COG0318 169 DPDDLAFLLY-T-SGTTGLPKGVVLTHRNLLANAAGIAAALGGG-LTPDDVVLSWLPLFHIFGLIVGLLAPLLGGGTLVL 245 (534)
T ss_pred CCCCEEEEEe-C-CCCCCCCCEeEEecHhHHHHHHHHHHHhccc-CCCCceEEEecChHHHHHHHHHHHHHHHcCCEEEe
Confidence 4677777665 0 22222 124679999988877776666432 7788888888883 35556677788999999888
Q ss_pred ecC-CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC
Q 010774 132 LYD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (501)
Q Consensus 132 l~~-~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~ 167 (501)
..+ .+.++.+...+...++..+..-......+....
T Consensus 246 ~~~~~f~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~ 282 (534)
T COG0318 246 LSPEPFDPEEVLWLIEKYKVTVLSGVPTFLRELLDNP 282 (534)
T ss_pred CCCCCcCHHHHHHHHHHhcceEEecchHHHHHHHhCC
Confidence 876 688888888888888777776666555544443
No 212
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=37.83 E-value=1.2e+02 Score=29.39 Aligned_cols=60 Identities=8% Similarity=0.075 Sum_probs=45.7
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
|++.++++|++|+|+.--..-++...+|-..- +.++.++.... -....++.+++.++...
T Consensus 159 lk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~g-a~Via~~~~~~---K~e~a~~lGAd~~i~~~ 218 (339)
T COG1064 159 LKKANVKPGKWVAVVGAGGLGHMAVQYAKAMG-AEVIAITRSEE---KLELAKKLGADHVINSS 218 (339)
T ss_pred hhhcCCCCCCEEEEECCcHHHHHHHHHHHHcC-CeEEEEeCChH---HHHHHHHhCCcEEEEcC
Confidence 56678999999999999999999888887554 88888876433 33445677888888754
No 213
>PF09269 DUF1967: Domain of unknown function (DUF1967); InterPro: IPR015349 The Obg family comprises a group of ancient P-loop small G proteins (GTPases) belonging to the TRAFAC (for translation factors) class and can be subdivided into several distinct protein subfamilies []. OBG GTPases have been found in both prokaryotes and eukaryotes []. The structure of the OBG GTPase from Thermus thermophilus has been determined []. This entry represents a C-terminal domain found in certain OBG GTPases. This domain contains a four-stranded beta sheet and three alpha helices flanked by an additional beta strand. It is predominantly found in the bacterial GTP-binding protein Obg, and is functionally uncharacterised. ; GO: 0000166 nucleotide binding; PDB: 1UDX_A.
Probab=37.32 E-value=34 Score=24.45 Aligned_cols=22 Identities=27% Similarity=0.465 Sum_probs=13.8
Q ss_pred HHHHHHHHHHhCCCCCCCEEEE
Q 010774 86 AAIRFGSAMRSRGVNPGDRCGI 107 (501)
Q Consensus 86 ~v~~~A~~L~~~gv~~gd~V~i 107 (501)
+...+-..|++.|++.||.|.|
T Consensus 41 ~~~Gv~~~L~~~G~~~GD~V~I 62 (69)
T PF09269_consen 41 KKMGVEKALRKAGAKEGDTVRI 62 (69)
T ss_dssp HHTTHHHHHHTTT--TT-EEEE
T ss_pred HHCCHHHHHHHcCCCCCCEEEE
Confidence 3344556688889999999976
No 214
>PLN02246 4-coumarate--CoA ligase
Probab=37.31 E-value=2e+02 Score=29.79 Aligned_cols=87 Identities=9% Similarity=-0.044 Sum_probs=64.9
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
-.+|+..+......+...+. ..++..+|++....+-.. -....+++++..|+..+.... ....+...++..++..
T Consensus 49 ~~~ty~el~~~~~~la~~L~--~~g~~~gd~V~i~~~~~~-~~~~~~la~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (537)
T PLN02246 49 RVYTYADVELLSRRVAAGLH--KLGIRQGDVVMLLLPNCP-EFVLAFLGASRRGAVTTTANPFYTPAEIAKQAKASGAKL 125 (537)
T ss_pred ceeeHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCCh-HHHHHHHHHHHcCEEEecCCCCCCHHHHHHHHHhcCCcE
Confidence 36899999888877766542 236788999988876653 223357788899999887764 7788889999999999
Q ss_pred EEecchHHHHHH
Q 010774 316 FSGVPRVYDRIY 327 (501)
Q Consensus 316 ~~~~P~~~~~l~ 327 (501)
++........+.
T Consensus 126 li~~~~~~~~~~ 137 (537)
T PLN02246 126 IITQSCYVDKLK 137 (537)
T ss_pred EEEccchHHHHH
Confidence 988777665543
No 215
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=37.07 E-value=3.9e+02 Score=31.82 Aligned_cols=122 Identities=7% Similarity=-0.115 Sum_probs=76.9
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (501)
.|+.+|++..- .|.+|. -..+|.+.+...+..+.. ..++.++|++..+.+-+. -.+..++.++..|++++..
T Consensus 413 ~~~d~a~ii~T--SGSTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~~~~~~~~~d~~~~~i~~~L~~G~~l~~~ 487 (1389)
T TIGR03443 413 GPDSNPTLSFT--SGSEGIPKGVLGRHFSLAYYFPWMAK---RFGLSENDKFTMLSGIAHDPIQRDMFTPLFLGAQLLVP 487 (1389)
T ss_pred CCCCceEEEEC--CCCCCCCCEEEeccHHHHHHHHHHHH---hcCCCCCCEEEEecCceecchHHHHHHHHhCCCEEEEc
Confidence 45667765540 232222 136788877766544433 347889999888776443 2334578888899887765
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecC
Q 010774 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFAN 182 (501)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 182 (501)
+.. ..+..+...++..++..+.........+..........++.++..+.
T Consensus 488 ~~~~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~~~lr~~~~gGe 539 (1389)
T TIGR03443 488 TADDIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQATTPIPSLHHAFFVGD 539 (1389)
T ss_pred ChhhccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcccccCCCccEEEEecc
Confidence 543 35678889999999999987776555544333333455666655544
No 216
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=37.05 E-value=2.8e+02 Score=29.60 Aligned_cols=97 Identities=14% Similarity=0.203 Sum_probs=70.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++... ..+|. .-.+|...|...+..+...+ ...++..+|++...+|..- -.+..+++++..|+..+...
T Consensus 66 p~~~Al~~~~-~~~~~--~~~~Ty~eL~~~v~~lA~~L--~~~Gv~~Gd~V~i~~~n~~-e~v~~~lA~~~~Gav~vpl~ 139 (628)
T TIGR02316 66 GEQLALVTVS-SETGQ--ERTLTYRQLHREVNVFASAL--RALGVGRGDRVLIYMPMIA-EAVFAMLACARIGAIHSVVF 139 (628)
T ss_pred CCCeEEEEEc-CCCCc--eEEEeHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCCH-HHHHHHHHHHHhCCEEEecC
Confidence 4666766532 22222 24689999988888777654 2337899999999998863 23345788999999987665
Q ss_pred C--CHHHHHHHHhhhcCcEEEecch
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (501)
. ....+...++..++..+++...
T Consensus 140 ~~~~~~~l~~~l~~~~~~~li~~~~ 164 (628)
T TIGR02316 140 GGFASHSLALRIDDATPKLIVSADA 164 (628)
T ss_pred CCCCHHHHHHHHHhcCceEEEECCc
Confidence 4 7888999999999999988654
No 217
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=36.98 E-value=1.7e+02 Score=29.64 Aligned_cols=25 Identities=8% Similarity=0.080 Sum_probs=12.5
Q ss_pred HHHHHHHHhhCC-CeeeeecccccCc
Q 010774 398 HVEEFLRVTSGA-PLTQGYGLTESCS 422 (501)
Q Consensus 398 ~~~~~~~~~~~~-~l~~~yG~tE~~~ 422 (501)
+...+|.+.+.. .+-..+|-+|+..
T Consensus 351 ~~~~~f~~~l~l~~~a~slGg~~Slv 376 (432)
T PRK06702 351 EAAKEFIANVKLATLVTHVADARTCV 376 (432)
T ss_pred HHHHHHHHhCccceeccccCCCCcce
Confidence 434455544332 3445567667654
No 218
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=36.86 E-value=4.6e+02 Score=30.33 Aligned_cols=121 Identities=13% Similarity=0.012 Sum_probs=77.9
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .+.+|. ...+|.+.+...+..+.. ..++.++|++...+|-. ..+...+++.+..|+.++.
T Consensus 780 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~v~ 854 (1146)
T PRK08633 780 KPDDTATIIFS--SGSEGEPKGVMLSHHNILSNIEQISD---VFNLRNDDVILSSLPFFHSFGLTVTLWLPLLEGIKVVY 854 (1146)
T ss_pred CCCCEEEEEEC--CCCCCCCceEEechHHHHHHHHHHHH---hcCCCCCCEEEEcCcHHHHHhHHHHHHHHHHCCCEEEE
Confidence 45677776550 222232 246788888766655443 34678899888777743 3334446777888988887
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEec
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFA 181 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~ 181 (501)
.....+++.+...+++.++..+.........+.+.. ......++.++.-+
T Consensus 855 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gg 907 (1146)
T PRK08633 855 HPDPTDALGIAKLVAKHRATILLGTPTFLRLYLRNKKLHPLMFASLRLVVAGA 907 (1146)
T ss_pred eCCCCCHHHHHHHHHHcCCeEEEecHHHHHHHHhccccCcccCCCeeeEEEcC
Confidence 766678899999999999999998876665544321 12234455554443
No 219
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=36.76 E-value=3.2e+02 Score=28.20 Aligned_cols=104 Identities=9% Similarity=-0.029 Sum_probs=69.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH---HHHHHHhcCCEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII---AMEACNSQAITYV 130 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v 130 (501)
.++.+|++..- .+.+|. ...+|.+.+...+..... ..++.++|++...+|..-.+-. ..++++..|++++
T Consensus 181 ~~~~~a~i~~T--SGTTG~PKgv~~s~~~~~~~~~~~~~---~~~~~~~d~~l~~~P~~h~~~~~~~~~~~~l~~G~~~v 255 (527)
T TIGR02275 181 KSDEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSVE---ICWLTQQTRYLCALPAAHNYPLSSPGALGVFYAGGCVV 255 (527)
T ss_pred CCCccEEEEeC--CCCCCCCceeeeehHHHHHHHHHHHh---hcCCCcCCEEEECCChHhhhhhhHHHHHHHHhcCCeEE
Confidence 45677776540 222222 246788887766554333 4578889999888875533322 3677788888876
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
.. +...+..+...++..++.+++.....+..+.+
T Consensus 256 ~~-~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~ 289 (527)
T TIGR02275 256 LA-PDPSPTDCFPLIERHKVTVTALVPPAVALWMQ 289 (527)
T ss_pred EC-CCCCHHHHHHHHHHhCCeEEEecHHHHHHHHh
Confidence 64 44577888889999999999988776655443
No 220
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=36.75 E-value=1.5e+02 Score=30.82 Aligned_cols=86 Identities=6% Similarity=-0.086 Sum_probs=67.3
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+...+..+...+.. .++..++++....|-...+ +..+++++..|+..+.... ....+...+++.+++.+
T Consensus 46 ~~Ty~el~~~v~~la~~L~~--~gi~~g~~V~v~~~n~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~l 122 (542)
T PRK06155 46 RWTYAEAARAAAAAAHALAA--AGVKRGDRVALMCGNRIEF-LDVFLGCAWLGAIAVPINTALRGPQLEHILRNSGARLL 122 (542)
T ss_pred cccHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCChHH-HHHHHHHHHhCCEEEEeccccCHHHHHHHHHhcCceEE
Confidence 58888888888877665422 3678899998887776544 4458889999999987765 78899999999999999
Q ss_pred EecchHHHHHH
Q 010774 317 SGVPRVYDRIY 327 (501)
Q Consensus 317 ~~~P~~~~~l~ 327 (501)
++.+.....+.
T Consensus 123 ~~~~~~~~~~~ 133 (542)
T PRK06155 123 VVEAALLAALE 133 (542)
T ss_pred EEChhhHHHHH
Confidence 99887766554
No 221
>PRK11493 sseA 3-mercaptopyruvate sulfurtransferase; Provisional
Probab=36.62 E-value=61 Score=30.58 Aligned_cols=53 Identities=9% Similarity=0.040 Sum_probs=42.9
Q ss_pred EEeeHHHHHH-----HHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 76 VWLTYQEVYD-----AAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 76 ~~~Ty~el~~-----~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
..+.|.++.. ....+...|.+.|+.+++.|.++|.++.....+++++..+|..
T Consensus 200 ~~i~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~ii~yC~~G~~A~~~~~~l~~~G~~ 257 (281)
T PRK11493 200 LNVPWTELVREGELKTTDELDAIFFGRGVSFDRPIIASCGSGVTAAVVVLALATLDVP 257 (281)
T ss_pred CCCCHHHhcCCCCcCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 3677888763 2456667778889999999999999999999999999888864
No 222
>PRK07514 malonyl-CoA synthase; Validated
Probab=36.20 E-value=2.6e+02 Score=28.55 Aligned_cols=87 Identities=10% Similarity=0.022 Sum_probs=65.8
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+. ..++..+|++....+-.. -....+++++..|+..+.... ....+...++..+++.
T Consensus 27 ~~~Ty~eL~~~~~~la~~L~--~~g~~~gd~v~i~~~~~~-e~~v~~la~~~~G~~~v~l~~~~~~~~~~~~l~~~~~~~ 103 (504)
T PRK07514 27 LRYTYGDLDAASARLANLLV--ALGVKPGDRVAVQVEKSP-EALALYLATLRAGAVFLPLNTAYTLAELDYFIGDAEPAL 103 (504)
T ss_pred CEEcHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEECCCCCCHHHHHHHHHhCCCcE
Confidence 46888888887777665442 236788999988877663 333357888999999887664 7788889999999999
Q ss_pred EEecchHHHHHH
Q 010774 316 FSGVPRVYDRIY 327 (501)
Q Consensus 316 ~~~~P~~~~~l~ 327 (501)
+...+.....+.
T Consensus 104 ii~~~~~~~~~~ 115 (504)
T PRK07514 104 VVCDPANFAWLS 115 (504)
T ss_pred EEEccchhHHHH
Confidence 999888776553
No 223
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=35.80 E-value=1.7e+02 Score=29.02 Aligned_cols=65 Identities=12% Similarity=0.089 Sum_probs=46.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
..+.-.|+.+++++||-|.+ .+.-|+...=++...|+.++.+|-. .+++.+...+... .|+|+.-
T Consensus 60 ~AL~laL~al~ig~GDeVI~---ps~TfvATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~-tKAIipV 129 (374)
T COG0399 60 AALHLALLALAIGPGDEVIV---PSFTFVATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR-TKAIIPV 129 (374)
T ss_pred HHHHHHHHhcCCCCCCEEEe---cCCchHHHHHHHHHcCCeEEEEecCCcccCCCHHHHHHHcccC-CeEEEEe
Confidence 44555667778999995543 3556888888999999999888643 4777787777664 5666544
No 224
>PRK05857 acyl-CoA synthetase; Validated
Probab=35.59 E-value=2e+02 Score=29.95 Aligned_cols=94 Identities=15% Similarity=0.079 Sum_probs=68.7
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.. .| ...+|...+......+...+.. .++..++++...++-... .+..+++++..|+..+...
T Consensus 28 p~~~a~~~~-~~------~~~~Ty~el~~~~~~~a~~L~~--~g~~~g~~V~i~~~~~~e-~~~~~lA~~~~G~v~v~l~ 97 (540)
T PRK05857 28 PEAIALRRC-DG------TSALRYRELVAEVGGLAADLRA--QSVSRGSRVLVISDNGPE-TYLSVLACAKLGAIAVMAD 97 (540)
T ss_pred CCcEEEeec-CC------CceeeHHHHHHHHHHHHHHHHH--hCcCCCCEEEEEcCCCHH-HHHHHHHHHHcCeEEEecC
Confidence 566666532 22 1458999998888877765422 367888999888877643 3445888999999998776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
. ....+.+.++..++..+++.+..
T Consensus 98 ~~~~~~~l~~~~~~~~~~~ii~~~~~ 123 (540)
T PRK05857 98 GNLPIAAIERFCQITDPAAALVAPGS 123 (540)
T ss_pred ccCCHHHHHHHHHhcCCceEEEeccc
Confidence 5 78888888999999998887764
No 225
>PF06277 EutA: Ethanolamine utilisation protein EutA; InterPro: IPR009377 Proteins in this entry are EutA ethanolamine utilization proteins, reactivating factors for ethanolamine ammonia lyase, encoded by the ethanolamine utilization eut operon. The holoenzyme of adenosylcobalamin-dependent ethanolamine ammonia-lyase (EutBC, IPR0092462 from INTERPRO, IPR010628 from INTERPRO), which is part of the ethanolamine utilization pathway [, , ], undergoes suicidal inactivation during catalysis as well as inactivation in the absence of substrate. The inactivation involves the irreversible cleavage of the Co-C bond of the coenzyme. The inactivated holoenzyme undergoes rapid and continuous reactivation in the presence of ATP, Mg2+, and free adenosylcobalamin in permeabilised cells (in situ), homogenate, and cell extracts of Escherichia coli. The EutA protein is essential for reactivation. It was demonstrated with purified recombinant EutA that both the suicidally inactivated and O2-inactivated holoethanolamine ammonia lyase underwent rapid reactivation in vitro by EutA in the presence of adenosylcobalamin, ATP, and Mg2+ []. The inactive enzyme-cyanocobalamin complex was also activated in situ and in vitro by EutA under the same conditions. Thus EutA is believed to be the only component of the reactivating factor for ethanolamine ammonia lyase. Reactivation and activation occur through the exchange of modified coenzyme for free intact adenosylcobalamin []. Bacteria that harbor the ethanolamine utilization pathway can use ethanolamine as a source of carbon and nitrogen. For more information on the ethanolamine utilization pathway, please see IPR009194 from INTERPRO, IPR012408 from INTERPRO.
Probab=35.50 E-value=3.8e+02 Score=27.34 Aligned_cols=65 Identities=14% Similarity=0.082 Sum_probs=47.7
Q ss_pred CCHHHHHHHHHHhC-----CCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH
Q 010774 43 ESPWQFFCDSAKRI-----PNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (501)
Q Consensus 43 ~tl~~~l~~~a~~~-----p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 116 (501)
..+.+.+++..+.+ -+..|+... +. ...+|+++.+.++.++..+.+. ++++..+.+++.+...=+
T Consensus 353 ~~l~~~i~~~l~~~~~~~~~~~~Alal~----g~----~~~~f~~iq~lA~~i~~~~~~~-~~~~~Plivv~e~D~aKv 422 (473)
T PF06277_consen 353 EELAEAIREALEWFDLEGEDQPVALALP----GK----PNPSFAEIQELAEAIAEGMAEL-INPDQPLIVVVEQDMAKV 422 (473)
T ss_pred HHHHHHHHHHHHhhcccCCCCcEEEEeC----CC----CCCCHHHHHHHHHHHHHHHHhh-ccCCCCEEEEECchHHHH
Confidence 56777777777653 234455443 32 4689999999999999999987 677888888888765443
No 226
>TIGR01137 cysta_beta cystathionine beta-synthase. Members of this family closely resemble cysteine synthase but contain an additional C-terminal CBS domain. The function of any bacterial member included in this family is proposed but not proven.
Probab=35.45 E-value=2.9e+02 Score=28.06 Aligned_cols=64 Identities=11% Similarity=0.003 Sum_probs=47.0
Q ss_pred HHhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
..+.|. .+|+.|+-. ..+-.-....++|.+.|..+..+-|...+.+....++..++++++++..
T Consensus 53 a~~~g~~~~g~~vv~~-ssGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (454)
T TIGR01137 53 AEASGRLKPGDTIIEP-TSGNTGIGLALVAAIKGYKCIIVLPEKMSNEKVDVLKALGAEIVRTPTA 117 (454)
T ss_pred HHHcCCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCeEEEEeCCCcCHHHHHHHHHCCCEEEEcCCc
Confidence 334454 778776554 4455556667788889999888777666677788899999999999753
No 227
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.93 E-value=4.3e+02 Score=25.56 Aligned_cols=73 Identities=12% Similarity=0.138 Sum_probs=54.1
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP 168 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~ 168 (501)
-|.+.|+.+|++|+|..--..-++...+|.++ |.-+..++... ..-...++..++...+...+..+.......
T Consensus 173 pLk~~g~~pG~~vgI~GlGGLGh~aVq~AKAM-G~rV~vis~~~--~kkeea~~~LGAd~fv~~~~d~d~~~~~~~ 245 (360)
T KOG0023|consen 173 PLKRSGLGPGKWVGIVGLGGLGHMAVQYAKAM-GMRVTVISTSS--KKKEEAIKSLGADVFVDSTEDPDIMKAIMK 245 (360)
T ss_pred hhHHcCCCCCcEEEEecCcccchHHHHHHHHh-CcEEEEEeCCc--hhHHHHHHhcCcceeEEecCCHHHHHHHHH
Confidence 46778999999999999999999999998766 55666666543 234466888999988877765555544443
No 228
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=34.92 E-value=1.8e+02 Score=30.24 Aligned_cols=83 Identities=13% Similarity=0.040 Sum_probs=63.1
Q ss_pred EeeHHHHHHHHHHHHHH-HHhCCCCCCCEEEEEcC--CchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIRFGSA-MRSRGVNPGDRCGIYGS--NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~-L~~~gv~~gd~V~i~~~--n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+|+.. .-..|.+ ....|+++.|+|-+.+| .+...++-+-+|+..|++++ |....|+..+..-..+.++.++
T Consensus 261 vith~r----~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa~ilGi~~~l~~GaT~V-lrkKFSAS~FW~DC~k~~~Tv~ 335 (649)
T KOG1179|consen 261 VITHLR----YLQGAAGFYYVFGMTADDVVYTTLPLYHSAAGILGIGGCLLHGATVV-LRKKFSASNFWDDCRKYNVTVI 335 (649)
T ss_pred HHHHHH----HHHHHHHHHHHhCCCccceEEEcchhHHHHHHHHHHHHHHhcCceEE-EecccchhhhHHHHHHhCCeee
Confidence 455544 4445553 33459999999999999 67888999999999998876 5778899999888889998888
Q ss_pred EEcCCChhhhh
Q 010774 154 FVQENKIPSIL 164 (501)
Q Consensus 154 l~~~~~~~~~~ 164 (501)
-+-.+...-+.
T Consensus 336 QYIGElcRYLl 346 (649)
T KOG1179|consen 336 QYIGELCRYLL 346 (649)
T ss_pred ehHHHHHHHHH
Confidence 77666544443
No 229
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=34.67 E-value=2.3e+02 Score=27.99 Aligned_cols=65 Identities=14% Similarity=0.022 Sum_probs=41.3
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecC-----CCCHHHHHHHHHh---cCceEEEE
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINH---AEVSIAFV 155 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~---~~~~~vl~ 155 (501)
..+...+..+++++||.|.+-.+.. ....-++...|+.++.++. ..+.+++...++. -+.++|+.
T Consensus 55 ~al~~~l~al~~~~Gd~Viv~~~~~---~~~~~~~~~~G~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~t~~v~~ 127 (380)
T TIGR03588 55 SALHIACLALGVGPGDRVWTTPITF---VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKGKLPKAIVP 127 (380)
T ss_pred HHHHHHHHHcCCCCCCEEEeCCcch---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHhhcccCCCceEEEE
Confidence 3444455556788999977766543 3444566778887766543 2467778777763 35566664
No 230
>PRK13388 acyl-CoA synthetase; Provisional
Probab=34.57 E-value=2.7e+02 Score=28.96 Aligned_cols=96 Identities=9% Similarity=-0.070 Sum_probs=69.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC-CCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC-SEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~-~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
++.++++.. +..+|...+......+...+. ..+. ..+|++...++-... -...+++++..|+..+..
T Consensus 15 p~~~Al~~~---------~~~lTy~el~~~~~~la~~L~--~~g~~~~~~~V~i~~~n~~~-~v~~~lA~~~~Ga~~v~l 82 (540)
T PRK13388 15 DDTIAVRYG---------DRTWTWREVLAEAAARAAALI--ALADPDRPLHVGVLLGNTPE-MLFWLAAAALGGYVLVGL 82 (540)
T ss_pred CCceEEEEC---------CceeeHHHHHHHHHHHHHHHH--HhcCCCCCCEEEEECCCCcH-HHHHHHHHHhCCCEEEEe
Confidence 466676541 236899999888887766542 2255 578888888776543 233578899999999877
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecchHHHHH
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (501)
.. ....+...+.+.+++.++........+
T Consensus 83 ~p~~~~~~l~~~l~~~~~~~~i~~~~~~~~~ 113 (540)
T PRK13388 83 NTTRRGAALAADIRRADCQLLVTDAEHRPLL 113 (540)
T ss_pred cccCChHHHHHHHHhcCCCEEEEChhhhHHH
Confidence 65 778888999999999999877665543
No 231
>PRK08308 acyl-CoA synthetase; Validated
Probab=34.56 E-value=4.7e+02 Score=25.91 Aligned_cols=119 Identities=10% Similarity=0.082 Sum_probs=76.1
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++..- .+.+|. ...+|++.+...+..+... .++..+|++...+|.. ..++..++..+..|+.++.
T Consensus 99 ~~~~~~~i~~T--SGtTG~PKgv~~s~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~ 173 (414)
T PRK08308 99 LAEEPSLLQYS--SGTTGEPKLIRRSWTEIDREIEAYNEA---LNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVI 173 (414)
T ss_pred CCCCceEEEEC--CCCCCCCcEEEEehHhHHHHHHHHHHh---hCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEe
Confidence 45566665540 222232 2467999887766555543 4567889888877754 3345567888899998877
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEec
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (501)
.+ ..++..+...++..++..++.....+..+.+..... ..++.++.-+
T Consensus 174 ~~-~~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~-~~l~~~~~~G 221 (414)
T PRK08308 174 IT-NKNPKFALNILRNTPQHILYAVPLMLHILGRLLPGT-FQFHAVMTSG 221 (414)
T ss_pred cC-CCCHHHHHHHHHHhCCeEEEcCHHHHHHHHhcCCcc-ccccEEEEcc
Confidence 65 456788888899999998888776665554433221 2344444433
No 232
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=34.15 E-value=3.2e+02 Score=28.05 Aligned_cols=101 Identities=10% Similarity=-0.026 Sum_probs=71.0
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.... .+. .-.+|...+......+...+. ..++..+|++....+-...+ ...+++++..|+..+...
T Consensus 21 p~~~a~~~~~~--~~~--~~~~ty~~l~~~v~~la~~L~--~~g~~~~~~v~i~~~n~~~~-~~~~la~~~~G~~~v~l~ 93 (517)
T PRK08008 21 GHKTALIFESS--GGV--VRRYSYLELNEEINRTANLFY--SLGIRKGDKVALHLDNCPEF-IFCWFGLAKIGAIMVPIN 93 (517)
T ss_pred CCceEEEcccC--CCc--cceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCeEEEEcC
Confidence 56667654321 111 134788888888777665432 23677889999887776533 235778899999988776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (501)
. .+..+...+++.+++.++..+.....+
T Consensus 94 ~~~~~~~l~~~l~~~~~~~l~~~~~~~~~~ 123 (517)
T PRK08008 94 ARLLREESAWILQNSQASLLVTSAQFYPMY 123 (517)
T ss_pred cccCHHHHHHHHHhcCceEEEEecchhHHH
Confidence 4 888999999999999999988766544
No 233
>cd06448 L-Ser-dehyd Serine dehydratase is a pyridoxal phosphate (PLP)-dependent enzyme which catalyzes the conversion of L- , D-serine, or L-threonine to pyruvate/ketobutyrate and ammonia.
Probab=34.03 E-value=1.4e+02 Score=28.66 Aligned_cols=61 Identities=8% Similarity=-0.032 Sum_probs=46.3
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 97 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.|..+++.|+.... +-.-..+.++|.+.|..+..+-|...+......++..++++++++..
T Consensus 46 ~g~~~~~~vv~aSs-GN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~l~~~GA~v~~~~~~ 106 (316)
T cd06448 46 QGLNECVHVVCSSG-GNAGLAAAYAARKLGVPCTIVVPESTKPRVVEKLRDEGATVVVHGKV 106 (316)
T ss_pred hhcccCCeEEEeCC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCc
Confidence 34345666665553 44555667888899999988888877788889999999999998765
No 234
>PRK07798 acyl-CoA synthetase; Validated
Probab=33.66 E-value=3.1e+02 Score=28.21 Aligned_cols=88 Identities=6% Similarity=-0.166 Sum_probs=64.5
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
-.+|...+......+...+.. .++..+|++....+-.-. .+..+++++..|+..+.... ....+...+++.++..
T Consensus 27 ~~~ty~el~~~~~~la~~L~~--~g~~~~~~v~v~~~n~~~-~~~~~~a~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 103 (533)
T PRK07798 27 RRLTYAELEERANRLAHYLIA--QGLGPGDHVGIYARNRIE-YVEAMLGAFKARAVPVNVNYRYVEDELRYLLDDSDAVA 103 (533)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEEcCCCHH-HHHHHHHHHhcCeEEEecCcCCCHHHHHHHHhhcCCCE
Confidence 468888888888777665422 367788888887765432 23357788899999887765 7788889999999999
Q ss_pred EEecchHHHHHHH
Q 010774 316 FSGVPRVYDRIYT 328 (501)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (501)
++........+.+
T Consensus 104 ~~~~~~~~~~~~~ 116 (533)
T PRK07798 104 LVYEREFAPRVAE 116 (533)
T ss_pred EEEchhhHHHHHH
Confidence 9988776655543
No 235
>cd01561 CBS_like CBS_like: This subgroup includes Cystathionine beta-synthase (CBS) and Cysteine synthase. CBS is a unique heme-containing enzyme that catalyzes a pyridoxal 5'-phosphate (PLP)-dependent condensation of serine and homocysteine to give cystathionine. Deficiency of CBS leads to homocystinuria, an inherited disease of sulfur metabolism characterized by increased levels of the toxic metabolite homocysteine. Cysteine synthase on the other hand catalyzes the last step of cysteine biosynthesis. This subgroup also includes an O-Phosphoserine sulfhydrylase found in hyperthermophilic archaea which produces L-cysteine from sulfide and the more thermostable O-phospho-L-serine.
Probab=33.55 E-value=4.1e+02 Score=25.04 Aligned_cols=64 Identities=9% Similarity=0.122 Sum_probs=47.4
Q ss_pred HhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 95 RSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 95 ~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
.+.|. ++|+.|+. ...+-.-..+.++|.++|..+..+-|..........++..++++++++...
T Consensus 45 ~~~g~~~~~~~vv~-~SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~Ga~v~~~~~~~ 109 (291)
T cd01561 45 EKRGLLKPGTTIIE-PTSGNTGIGLAMVAAAKGYRFIIVMPETMSEEKRKLLRALGAEVILTPEAE 109 (291)
T ss_pred HHcCCCCCCCEEEE-eCCChHHHHHHHHHHHcCCeEEEEECCCCCHHHHHHHHHcCCEEEEeCCCC
Confidence 34453 35666554 555556667777888999998888777766777788999999999998764
No 236
>PRK06381 threonine synthase; Validated
Probab=33.11 E-value=1.5e+02 Score=28.42 Aligned_cols=56 Identities=9% Similarity=-0.083 Sum_probs=42.3
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 103 DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 103 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
++| +....+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 64 ~~l-v~aSsGN~g~alA~~aa~~G~~~~ivvp~~~~~~~~~~l~~~GA~V~~~~~~~ 119 (319)
T PRK06381 64 SGI-TVGTCGNYGASIAYFARLYGLKAVIFIPRSYSNSRVKEMEKYGAEIIYVDGKY 119 (319)
T ss_pred CEE-EEeCCcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEcCCCH
Confidence 344 44555666667778888999988877776666677788999999999998753
No 237
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=32.86 E-value=2.8e+02 Score=22.85 Aligned_cols=45 Identities=9% Similarity=-0.078 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 113 PEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 113 ~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
....+....+...|.-++.+....+++++.......++++|..+.
T Consensus 18 lG~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~ 62 (137)
T PRK02261 18 VGNKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSS 62 (137)
T ss_pred HHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcC
Confidence 445566677788999999999999999999999999999999876
No 238
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=32.83 E-value=5.4e+02 Score=26.14 Aligned_cols=121 Identities=7% Similarity=-0.062 Sum_probs=75.5
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (501)
.++.++++.. ..+.+|. ...+|++.+...+..+.. ..++..+|++....|.+ ...+..+++++..|+..+.+
T Consensus 139 ~~~~~~~il~--TSGTTG~PK~v~~s~~~~~~~~~~~~~---~~~~~~~~~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 213 (502)
T TIGR01734 139 KGDDNYYIIY--TSGSTGNPKGVQISHDNLVSFTNWMLA---DFPLSEGKQFLNQAPFSFDLSVMDLYPCLASGGTLHCL 213 (502)
T ss_pred CCCCeEEEEE--CCCCCCCCCEEEEecHHHHHHHHHHHH---hCCCCCCceEEeecCceechhHHHHHHHHHCCCEEEEc
Confidence 3455555544 1233332 247888888766554433 35788888888777654 33455677889999999888
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhhhhc---CccCCCCccEEEEec
Q 010774 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSC---LPRCCLYLKTIVSFA 181 (501)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~v~~~~ 181 (501)
++. .++..+...+...++..+.........+... .......++.++..+
T Consensus 214 ~~~~~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~~~~~~~~l~~~~~~G 267 (502)
T TIGR01734 214 DKDITNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNFNQENYPHLTHFLFCG 267 (502)
T ss_pred CHHHhcCHHHHHHHHHHcCCeEEEEChhHHHHHHhccccccccCCcccEEEEcC
Confidence 754 4677888888999998888877655443221 112234455555544
No 239
>PF09153 DUF1938: Domain of unknown function (DUF1938); InterPro: IPR015236 This domain, which is predominantly found in the archaeal protein O6-alkylguanine-DNA alkyltransferase, adopts a secondary structure consisting of a three stranded antiparallel beta-sheet and three alpha helices. The exact function has not, as yet, been defined, though it has been postulated that this domain may confer thermostability to the protein []. ; GO: 0005737 cytoplasm; PDB: 1MGT_A.
Probab=32.55 E-value=66 Score=23.72 Aligned_cols=36 Identities=19% Similarity=0.187 Sum_probs=21.5
Q ss_pred CccEEeeHHHHHH-HHHHHHHHHHhCCCCCCCEEEEEcCCc
Q 010774 73 GPYVWLTYQEVYD-AAIRFGSAMRSRGVNPGDRCGIYGSNC 112 (501)
Q Consensus 73 ~~~~~~Ty~el~~-~v~~~A~~L~~~gv~~gd~V~i~~~n~ 112 (501)
|..-.++-.|+.+ ++.+++..|.++|+ .|-+--.+|
T Consensus 26 GItfslDg~efl~eri~~L~~~L~kRgv----~v~L~~~~S 62 (86)
T PF09153_consen 26 GITFSLDGEEFLRERISRLIEFLKKRGV----SVSLDEEPS 62 (86)
T ss_dssp EEEEESSHHHHHH-HHHHHHHHHHHTT----------B---
T ss_pred eEEEEeccHHHHHHHHHHHHHHHHhcCc----eeEEeecCC
Confidence 3344666788888 99999999999977 355544443
No 240
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=31.86 E-value=2.2e+02 Score=28.19 Aligned_cols=62 Identities=16% Similarity=0.203 Sum_probs=38.0
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEE
Q 010774 89 RFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 89 ~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl 154 (501)
.+...|..+++++||.|.+-.+. +.....++...|+.++.++.. .+.+.+...+.. +.++|+
T Consensus 60 al~lal~al~~~~Gd~Viv~~~~---~~~~~~~~~~~G~~~v~vd~~~~~~~~d~~~l~~~i~~-~tkav~ 126 (379)
T PRK11658 60 GMHITLMALGIGPGDEVITPSLT---WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP-RTKAII 126 (379)
T ss_pred HHHHHHHHcCCCCCCEEEECCCc---HHHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHhccc-CCeEEE
Confidence 33444556678899988766544 333345566788888766532 356677766643 556665
No 241
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=31.72 E-value=2.5e+02 Score=29.37 Aligned_cols=100 Identities=12% Similarity=0.070 Sum_probs=71.8
Q ss_pred CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec-
Q 010774 220 TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR- 298 (501)
Q Consensus 220 ~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~- 298 (501)
+..+ |+|-+-.++. -.+|.+.|......+...+... .+. ++|++...+|..-- ....++++...|+......
T Consensus 25 ~~~a-ii~~~e~~~~---~~~Ty~~L~~~v~r~A~~L~~~-~gv-kGDrV~iymp~~pe-~~~a~LA~~riGAI~~~vf~ 97 (528)
T COG0365 25 DDTA-IIFDGEDGLF---RELTYGDLRREVARLANALKDL-GGV-KGDRVAIYMPNSPE-AVIALLATARIGAIPAVVSP 97 (528)
T ss_pred CceE-EEEEcCCCCc---eEEEHHHHHHHHHHHHHHHHHh-CCC-CCCEEEEEcCCCHH-HHHHHHHHHHcCCEEeeccc
Confidence 3444 4455444444 6789999988888777655221 245 99999999999743 2345788888897765443
Q ss_pred -CCHHHHHHHHhhhcCcEEEecchHHHHH
Q 010774 299 -GDVRYLMEDIQELKPTMFSGVPRVYDRI 326 (501)
Q Consensus 299 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (501)
+.+..+...+...++.++++....+++.
T Consensus 98 ~f~~~al~~Ri~d~~~k~vit~d~~~~~g 126 (528)
T COG0365 98 GLSAEAVADRIADLGPKVLIADDGTFRNG 126 (528)
T ss_pred CCCHHHHHHHHHccCCCEEEEeccccccc
Confidence 3999999999999999999887777643
No 242
>cd02069 methionine_synthase_B12_BD B12 binding domain of methionine synthase. This domain binds methylcobalamin, which it uses as an intermediate methyl carrier from methyltetrahydrofolate (CH3H4folate) to homocysteine (Hcy).
Probab=31.67 E-value=3.8e+02 Score=24.03 Aligned_cols=83 Identities=12% Similarity=0.071 Sum_probs=0.0
Q ss_pred HHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHh
Q 010774 277 HIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (501)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (501)
|..|..+ ...--..|-.++.... .++.+.+.+.+.++.++..+-.+-..+.
T Consensus 101 HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~~v~~~~~~~~~~V~lS~~~~~~~~-------------------------- 154 (213)
T cd02069 101 HDIGKNLVGVILSNNGYEVIDLGVMVPIEKILEAAKEHKADIIGLSGLLVPSLD-------------------------- 154 (213)
T ss_pred hHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEccchhccHH--------------------------
Q ss_pred hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHH
Q 010774 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEF 402 (501)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~ 402 (501)
.-+-....+++. +..++ +++||.+++.+..+.
T Consensus 155 ---------------~~~~~i~~L~~~-~~~~~-i~vGG~~~~~~~~~~ 186 (213)
T cd02069 155 ---------------EMVEVAEEMNRR-GIKIP-LLIGGAATSRKHTAV 186 (213)
T ss_pred ---------------HHHHHHHHHHhc-CCCCe-EEEEChhcCHHHHhh
No 243
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=31.00 E-value=3.8e+02 Score=23.72 Aligned_cols=47 Identities=15% Similarity=0.096 Sum_probs=33.6
Q ss_pred HHHHHHHHH-HHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchH
Q 010774 276 AHIYDQIIE-THCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 276 ~~~~g~~~~-~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
.|..|..++ ..--..|..++.... .++.+.+.+.+.+++++..+-.+
T Consensus 94 ~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~~~~~~d~v~lS~~~ 143 (201)
T cd02070 94 IHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAVKEHKPDILGLSALM 143 (201)
T ss_pred cchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 566666553 334467888776553 78999999999999998765543
No 244
>PRK05850 acyl-CoA synthetase; Validated
Probab=30.94 E-value=3.4e+02 Score=28.40 Aligned_cols=104 Identities=12% Similarity=0.044 Sum_probs=71.8
Q ss_pred CCCeEEEEecC-C-CCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010774 219 KTNISTIMYTS-G-TTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (501)
Q Consensus 219 ~~~~~~i~~TS-G-tTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~ 296 (501)
++.++++.... + ..|. ...+|...+...+..+...+... + ..+|++...++-.. --+..+++++..|+..+.
T Consensus 15 p~~~a~~~~~~~~~~~~~--~~~lty~eL~~~v~~~A~~L~~~--g-~~gd~V~l~~~n~~-~~~~~~lA~~~~G~v~vp 88 (578)
T PRK05850 15 PDDAAFTFIDYEQDPAGV--AETLTWSQLYRRTLNVAEELRRH--G-STGDRAVILAPQGL-EYIVAFLGALQAGLIAVP 88 (578)
T ss_pred CCceEEEEEccCCCCCCc--eeeecHHHHHHHHHHHHHHHHHh--C-CCCCEEEEEcCCcc-cHHHHHHHHHHcCceEEe
Confidence 46666654321 1 1122 35689999988887776655321 3 46889888888663 223358888999999887
Q ss_pred ecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHH
Q 010774 297 WRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (501)
Q Consensus 297 ~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (501)
... ....+...++..++..+++.+.....+..
T Consensus 89 l~~~~~~~~~~~l~~~l~~~~~~~il~~~~~~~~~~~ 125 (578)
T PRK05850 89 LSVPQGGAHDERVSAVLRDTSPSVVLTTSAVVDDVTE 125 (578)
T ss_pred cCCCCccchHHHHHHHHHhcCCCEEEEcHHHHHHHHH
Confidence 753 46778889999999999998887766543
No 245
>cd00640 Trp-synth-beta_II Tryptophan synthase beta superfamily (fold type II); this family of pyridoxal phosphate (PLP)-dependent enzymes catalyzes beta-replacement and beta-elimination reactions. This CD corresponds to aminocyclopropane-1-carboxylate deaminase (ACCD), tryptophan synthase beta chain (Trp-synth_B), cystathionine beta-synthase (CBS), O-acetylserine sulfhydrylase (CS), serine dehydratase (Ser-dehyd), threonine dehydratase (Thr-dehyd), diaminopropionate ammonia lyase (DAL), and threonine synthase (Thr-synth). ACCD catalyzes the conversion of 1-aminocyclopropane-1-carboxylate to alpha-ketobutyrate and ammonia. Tryptophan synthase folds into a tetramer, where the beta chain is the catalytic PLP-binding subunit and catalyzes the formation of L-tryptophan from indole and L-serine. CBS is a tetrameric hemeprotein that catalyzes condensation of serine and homocysteine to cystathionine. CS is a homodimer that catalyzes the formation of L-cysteine from O-acetyl-L-serine. Ser-dehy
Probab=30.19 E-value=2.1e+02 Score=26.17 Aligned_cols=64 Identities=8% Similarity=-0.032 Sum_probs=45.6
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.+.|..+++.|+.. ..+-.-..+.++|...|..+..+-|..........++..+++++.++..
T Consensus 42 a~~~g~~~~~~vv~~-ssGN~g~alA~~a~~~g~~~~v~~p~~~~~~~~~~~~~~Ga~v~~~~~~ 105 (244)
T cd00640 42 AEEEGKLPKGVIIES-TGGNTGIALAAAAARLGLKCTIVMPEGASPEKVAQMRALGAEVVLVPGD 105 (244)
T ss_pred HHHcCCCCCCEEEEe-CCcHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 334443245555544 3345556667777779998888888777788888899999999999876
No 246
>PRK05939 hypothetical protein; Provisional
Probab=30.14 E-value=2.2e+02 Score=28.48 Aligned_cols=12 Identities=17% Similarity=0.047 Sum_probs=6.4
Q ss_pred eeeeecccccCc
Q 010774 411 LTQGYGLTESCS 422 (501)
Q Consensus 411 l~~~yG~tE~~~ 422 (501)
.-..+|..|+..
T Consensus 337 ~~~s~G~~~sl~ 348 (397)
T PRK05939 337 KATHLGDTRTLV 348 (397)
T ss_pred EccCCCCCCeee
Confidence 334556666544
No 247
>PLN02574 4-coumarate--CoA ligase-like
Probab=29.98 E-value=2.5e+02 Score=29.41 Aligned_cols=99 Identities=12% Similarity=0.105 Sum_probs=69.5
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++. +.++. .+|...+......+...+.. ..++..+|++....+-.. -.+..+++++..|+..+...
T Consensus 53 ~~~~a~~~---~~~~~----~~Ty~el~~~~~~lA~~L~~-~~G~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~ 123 (560)
T PLN02574 53 NGDTALID---SSTGF----SISYSELQPLVKSMAAGLYH-VMGVRQGDVVLLLLPNSV-YFPVIFLAVLSLGGIVTTMN 123 (560)
T ss_pred CCCCEEEE---CCCCC----cccHHHHHHHHHHHHHHHHH-HhCCCCCCEEEEECCCcc-hHHHHHHHHHHhCeEEeCcC
Confidence 45566664 22221 46888888777776664421 036788999998887653 33345788999999988776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRI 326 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l 326 (501)
. ....+...+.+.++..++..+.....+
T Consensus 124 p~~~~~~l~~~l~~~~~~~~~~~~~~~~~~ 153 (560)
T PLN02574 124 PSSSLGEIKKRVVDCSVGLAFTSPENVEKL 153 (560)
T ss_pred cccCHHHHHHHHHhcCCEEEEECHHHHHHH
Confidence 4 778888899999999998888766554
No 248
>PRK07529 AMP-binding domain protein; Validated
Probab=29.85 E-value=2.6e+02 Score=29.88 Aligned_cols=97 Identities=8% Similarity=-0.010 Sum_probs=66.6
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++....+.. ..+...+|...+...+..+...+. ..++..+|++...+|-..-+ +..+++++..|.. +.+.
T Consensus 39 p~~~Al~~~~~~~~-~~~~~~~Ty~eL~~~v~~~A~~L~--~~Gi~~gd~V~i~~~n~~e~-~~~~lA~~~~Gi~-~pi~ 113 (632)
T PRK07529 39 PDAPALSFLLDADP-LDRPETWTYAELLADVTRTANLLH--SLGVGPGDVVAFLLPNLPET-HFALWGGEAAGIA-NPIN 113 (632)
T ss_pred CCCceEEeecccCC-CCCCceeEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHHHHhCEE-EeCC
Confidence 46667765533221 123467899999888887766552 23788999999998876533 3346677777843 3333
Q ss_pred C--CHHHHHHHHhhhcCcEEEecc
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVP 320 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P 320 (501)
. .+..+...+++.++..+++..
T Consensus 114 ~~~~~~~i~~~l~~~~~~~li~~~ 137 (632)
T PRK07529 114 PLLEPEQIAELLRAAGAKVLVTLG 137 (632)
T ss_pred CcCCHHHHHHHHHhcCCcEEEEeC
Confidence 2 888999999999999998864
No 249
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.68 E-value=3.4e+02 Score=28.31 Aligned_cols=87 Identities=9% Similarity=-0.012 Sum_probs=64.9
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+......+...+.. ..++..+|++...+|-...+ ...+++++..|+..+.... ....+...+++.++..
T Consensus 48 ~~~Ty~el~~~~~~la~~L~~-~~gi~~gd~Vai~~~n~~~~-~~~~la~~~~Ga~~v~l~~~~~~~~l~~~l~~~~~~~ 125 (562)
T PRK05677 48 KTLTYGELYKLSGAFAAWLQQ-HTDLKPGDRIAVQLPNVLQY-PVAVFGAMRAGLIVVNTNPLYTAREMEHQFNDSGAKA 125 (562)
T ss_pred ceeeHHHHHHHHHHHHHHHHH-hcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEeecCCCCCHHHHHHHHhccCceE
Confidence 358999998888887665411 12678899999988876432 3357788999999987764 7888899999999999
Q ss_pred EEecchHHHHH
Q 010774 316 FSGVPRVYDRI 326 (501)
Q Consensus 316 ~~~~P~~~~~l 326 (501)
++........+
T Consensus 126 ii~~~~~~~~~ 136 (562)
T PRK05677 126 LVCLANMAHLA 136 (562)
T ss_pred EEEecchhhhH
Confidence 98877655443
No 250
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=29.67 E-value=2.8e+02 Score=28.38 Aligned_cols=87 Identities=9% Similarity=-0.121 Sum_probs=65.4
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
-.+|...+......+...+.. .++..+|++....+-.. ..+..+++++..|+..+.... ....+...+++.+++.
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~--~g~~~~~~V~i~~~~~~-~~~~~~la~~~~G~~~~~l~~~~~~~~~~~~~~~~~~~~ 86 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRA--LGLREGDVVAILLENNP-EFFEVYWAARRSGLYYTPINWHLTAAEIAYIVDDSGAKV 86 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHH--hCCCCCCEEEEEeCCCH-HHHHHHHHHHhcCcEEEecccccCHHHHHHHHhcCCCCE
Confidence 347888887777776664422 36788999998877763 334468889999999987764 7788888999999999
Q ss_pred EEecchHHHHHH
Q 010774 316 FSGVPRVYDRIY 327 (501)
Q Consensus 316 ~~~~P~~~~~l~ 327 (501)
+++.+.....+.
T Consensus 87 ii~~~~~~~~~~ 98 (502)
T PRK08276 87 LIVSAALADTAA 98 (502)
T ss_pred EEEccchhhHHH
Confidence 999887766543
No 251
>PRK07787 acyl-CoA synthetase; Validated
Probab=29.57 E-value=5.6e+02 Score=25.88 Aligned_cols=102 Identities=13% Similarity=-0.009 Sum_probs=68.7
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++... .+.+|. ...+|++.+...+..++.. .++.++|++...+|- ...+...+++.+..|+.++.
T Consensus 126 ~~~~~a~i~~T--SGTTG~PK~v~~t~~~l~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~ 200 (471)
T PRK07787 126 DPDAPALIVYT--SGTTGPPKGVVLSRRAIAADLDALAEA---WQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVH 200 (471)
T ss_pred CCCceEEEEEC--CCCCCCCCEEEEeHHHHHHHHHHHHHh---cCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEe
Confidence 45667665541 233332 2367888887766655543 467889988776663 23455678889999999887
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSIL 164 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~ 164 (501)
.. ..++..+...++ .++..+......+..+.
T Consensus 201 ~~-~~~~~~~~~~i~-~~~t~~~~~P~~~~~l~ 231 (471)
T PRK07787 201 TG-RPTPEAYAQALS-EGGTLYFGVPTVWSRIA 231 (471)
T ss_pred cC-CCCHHHHHHHHh-hCceEEEcchHHHHHHH
Confidence 65 467888999998 88888887666555443
No 252
>cd07050 BMC_EutL_repeat2 ethanolamine utilization protein S (EutS), Bacterial Micro-Compartment (BMC) domain repeat 2. EutL proteins are homologs of the carboxysome shell protein. They are encoded within the eut operon and might be required for the formation of the outer shell of the bacterial eut polyhedral organelles which are involved in the cobalamin-dependent degradation of ethanolamine. Although it has been suggested that EutL might form hexamers and further assemble into the flat facets of the polyhedral outer shell of eut organelles at present no experimental evidence directly supports this view. EutL proteins contain two tandem BMC domains. This CD includes domain 2 (the second BMC domain of EutL).
Probab=29.43 E-value=1.1e+02 Score=22.41 Aligned_cols=39 Identities=15% Similarity=0.122 Sum_probs=32.7
Q ss_pred HHHHhC-CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEE
Q 010774 92 SAMRSR-GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV 130 (501)
Q Consensus 92 ~~L~~~-gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v 130 (501)
.+|.+. |++.|+.++.+...-.|.+..+=|++++.-+-+
T Consensus 4 sYls~~agi~eGe~lAYLIapPlEa~y~lDaALKAAdV~~ 43 (87)
T cd07050 4 SYLSKTAGIAEGEALAYLIAPPLEAMYGLDAALKAADVEL 43 (87)
T ss_pred hhhHHhcCCCCCCeeeeeecCcHHHHHHHHHHHHhhceee
Confidence 456654 999999999999999999999999999876543
No 253
>PRK13383 acyl-CoA synthetase; Provisional
Probab=29.35 E-value=2.1e+02 Score=29.49 Aligned_cols=85 Identities=7% Similarity=-0.087 Sum_probs=64.7
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+...+..+...+. ..+...+|++...++-.- ..+..+++++..|+..+.... ....+...+++.+++.+
T Consensus 60 ~lTy~el~~~~~~la~~L~--~~gi~~g~~V~i~~~~~~-~~~~~~la~~~~G~v~vpl~~~~~~~~l~~~l~~~~~~~i 136 (516)
T PRK13383 60 ALSYRELQRATESLARRLT--RDGVAPGRAVGVMCRNGR-GFVTAVFAVGLLGADVVPISTEFRSDALAAALRAHHISTV 136 (516)
T ss_pred cEeHHHHHHHHHHHHHHHH--hcCCCCCCEEEEECCCCH-HHHHHHHHHHHhCeEEEEcCccCCHHHHHHHHhcCCCCEE
Confidence 4788888888777766542 236778899888877543 233357788999999988765 78899999999999999
Q ss_pred EecchHHHHH
Q 010774 317 SGVPRVYDRI 326 (501)
Q Consensus 317 ~~~P~~~~~l 326 (501)
+..+...+.+
T Consensus 137 i~~~~~~~~~ 146 (516)
T PRK13383 137 VADNEFAERI 146 (516)
T ss_pred EEchhHHHHH
Confidence 9988776554
No 254
>PLN02723 3-mercaptopyruvate sulfurtransferase
Probab=29.22 E-value=1.1e+02 Score=29.58 Aligned_cols=53 Identities=9% Similarity=0.041 Sum_probs=42.5
Q ss_pred EEeeHHHHHHH------HHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 76 VWLTYQEVYDA------AIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 76 ~~~Ty~el~~~------v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
..+.|.++... ...+...+.++|+.+++.|+++|..+.....+++++..+|..
T Consensus 237 vnip~~~~~~~~~~~~~~~el~~~~~~~gi~~~~~iv~yC~sG~~A~~~~~~L~~~G~~ 295 (320)
T PLN02723 237 KCVPFPQMLDSSQTLLPAEELKKRFEQEGISLDSPIVASCGTGVTACILALGLHRLGKT 295 (320)
T ss_pred cccCHHHhcCCCCCCCCHHHHHHHHHhcCCCCCCCEEEECCcHHHHHHHHHHHHHcCCC
Confidence 35777776542 456777788889999999999999998888889999999964
No 255
>PRK09088 acyl-CoA synthetase; Validated
Probab=28.87 E-value=4e+02 Score=27.03 Aligned_cols=81 Identities=14% Similarity=0.097 Sum_probs=61.1
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+...+..+...+. ..++..++++....+-...+ +..+++++..|+..+.... ....+...+++.+++.+
T Consensus 22 ~~ty~~l~~~v~~~a~~l~--~~g~~~~~~v~i~~~~~~~~-~~~~la~~~~G~~~v~~~~~~~~~~~~~~~~~~~~~~i 98 (488)
T PRK09088 22 RWTYAELDALVGRLAAVLR--RRGCVDGERLAVLARNSVWL-VALHFACARVGAIYVPLNWRLSASELDALLQDAEPRLL 98 (488)
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHHH-HHHHHHHHHcCeEEEeeCccCCHHHHHHHHHhCCCCEE
Confidence 5899999888877665442 22677889998887776532 3347888999999887764 78888899999999999
Q ss_pred EecchH
Q 010774 317 SGVPRV 322 (501)
Q Consensus 317 ~~~P~~ 322 (501)
++....
T Consensus 99 i~~~~~ 104 (488)
T PRK09088 99 LGDDAV 104 (488)
T ss_pred EEcchh
Confidence 876543
No 256
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=28.85 E-value=1.4e+02 Score=26.09 Aligned_cols=65 Identities=14% Similarity=0.033 Sum_probs=40.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEc
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYG 109 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~ 109 (501)
......+.+....+.+|...+++.. -.+......+.-.==.+|++.++.+|.+.|+.++ +|.+..
T Consensus 97 ~~~~~L~~~a~~L~~~p~~~i~V~G---HTD~~Gs~~yN~~LS~rRA~aV~~~L~~~Gv~~~-~i~~~G 161 (190)
T COG2885 97 KAQATLDELAKYLKKNPITRILVEG---HTDSTGSDEYNQALSERRAEAVADYLVSQGVVAD-RISTVG 161 (190)
T ss_pred hHHHHHHHHHHHHHhCCCcEEEEEe---cCCCCCCHHHhHHHHHHHHHHHHHHHHHcCCCcc-cEEEEE
Confidence 3444556667777789977777654 2221111233333335799999999999998777 665543
No 257
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=28.84 E-value=2.7e+02 Score=28.25 Aligned_cols=56 Identities=13% Similarity=0.186 Sum_probs=34.6
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 97 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
.++++||.|++-.+.. .....++...|+.++.++.. .+.+.+...+. .+.++|++.
T Consensus 106 ~~~~pGd~VIv~~~t~---~a~~~~v~~~G~~pv~vdvd~~~~~id~~~le~~i~-~~tkaVi~~ 166 (438)
T PRK15407 106 RALKPGDEVITVAAGF---PTTVNPIIQNGLVPVFVDVELPTYNIDASLLEAAVS-PKTKAIMIA 166 (438)
T ss_pred cCCCCCCEEEECCCCc---HHHHHHHHHcCCEEEEEecCCCcCCcCHHHHHHHcC-cCCeEEEEe
Confidence 3788899887765554 34445566678877666432 35666666553 356666654
No 258
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=28.79 E-value=4.7e+02 Score=27.78 Aligned_cols=97 Identities=18% Similarity=0.211 Sum_probs=69.9
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.. +..+|. .-.+|...|...+..+...+. ..+...+|++...+|..-- .+..+++++..|+..+...
T Consensus 67 p~~~A~~~~-~~~~~~--~~~~Ty~eL~~~v~~lA~~L~--~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~v~~~ 140 (629)
T PRK10524 67 PEQLALIAV-STETDE--ERTYTFRQLHDEVNRMAAMLR--SLGVQRGDRVLIYMPMIAE-AAFAMLACARIGAIHSVVF 140 (629)
T ss_pred CCCeEEEEE-cCCCCc--eEEEeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCcEEEeeC
Confidence 566776543 222222 346899999888877766542 2378899999999887642 2335788899999887665
Q ss_pred C--CHHHHHHHHhhhcCcEEEecch
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPR 321 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~ 321 (501)
. ....+...++..++..+++...
T Consensus 141 ~~~~~~~l~~~l~~~~~~~li~~~~ 165 (629)
T PRK10524 141 GGFASHSLAARIDDAKPVLIVSADA 165 (629)
T ss_pred CCCCHHHHHHHHHhcCCcEEEEccC
Confidence 4 7888999999999999988654
No 259
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=28.76 E-value=9.6e+02 Score=27.80 Aligned_cols=121 Identities=11% Similarity=-0.006 Sum_probs=75.1
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++++..- .+.+|. ...+|.+.+...+...++. .++.++|++...+|-. ..+...++..+..|...+.
T Consensus 791 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~g~~~~~~~~l~~G~~~~~ 865 (1140)
T PRK06814 791 DPDDPAVILFT--SGSEGTPKGVVLSHRNLLANRAQVAAR---IDFSPEDKVFNALPVFHSFGLTGGLVLPLLSGVKVFL 865 (1140)
T ss_pred CCCCcEEEEEC--CCccCCCcEEEecHHHHHHHHHHHHHh---hCCCCcCEEEEecchHHHHHHHHHHHHHHHcCCEEEE
Confidence 45667665540 222232 2467888887666655543 4678899998888743 2333556777788988877
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-cCCCCccEEEEec
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP-RCCLYLKTIVSFA 181 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~v~~~~ 181 (501)
.+.....+.+...+++.++..+.........+.+... .....++.++.-+
T Consensus 866 ~~~~~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~~~~~lr~v~~gg 916 (1140)
T PRK06814 866 YPSPLHYRIIPELIYDTNATILFGTDTFLNGYARYAHPYDFRSLRYVFAGA 916 (1140)
T ss_pred ecCcccHHHHHHHHHhcCCEEEEecHHHHHHHHhhcccccccceeEEEEcC
Confidence 7655566677788899999988877655544433211 1223455554444
No 260
>PF05452 Clavanin: Clavanin; InterPro: IPR008453 This family consists of clavanin proteins from the haemocytes of the invertebrate Styela clava (Sea squirt), a solitary tunicate. The family is made up of four alpha-helical antimicrobial peptides, clavanins A, B, C and D. The tunicate peptides resemble magainins in size, primary sequence and antibacterial activity. Synthetic clavanin A displays comparable antimicrobial activity to magainins and cecropins. The presence of alpha-helical antimicrobial peptides in the haemocytes of a urochordate suggests that such peptides are primeval effectors of innate immunity in the vertebrate lineage [].; GO: 0005576 extracellular region
Probab=28.51 E-value=26 Score=24.31 Aligned_cols=8 Identities=25% Similarity=0.762 Sum_probs=6.7
Q ss_pred CcccCCCC
Q 010774 493 GWFHTEVH 500 (501)
Q Consensus 493 gw~~TGD~ 500 (501)
-||.|||-
T Consensus 73 hwydtgdq 80 (80)
T PF05452_consen 73 HWYDTGDQ 80 (80)
T ss_pred ccccCCCC
Confidence 49999993
No 261
>PRK07868 acyl-CoA synthetase; Validated
Probab=28.00 E-value=7e+02 Score=28.53 Aligned_cols=69 Identities=7% Similarity=0.078 Sum_probs=48.1
Q ss_pred hCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 96 SRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 96 ~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
..++.++|++...+|-+-. +...+++++..| ..+.+.+.++++.+...++..++..++.-...+..+.+
T Consensus 640 ~~~l~~~d~~L~~~Pl~h~~gl~~~l~~~l~gG-~~vvl~~~~~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~ 710 (994)
T PRK07868 640 AAALDRRDTVYCLTPLHHESGLLVSLGGAVVGG-SRIALSRGLDPDRFVQEVRQYGVTVVSYTWAMLREVVD 710 (994)
T ss_pred hcCCCCCCeEEEecChHHHhHHHHHHHHHhccc-eEEEecCCCCHHHHHHHHHHhCCcEEEeHHHHHHHHHh
Confidence 3478889999888885433 223344444444 44555567899999999999999999887766655544
No 262
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=27.89 E-value=3.5e+02 Score=28.15 Aligned_cols=85 Identities=7% Similarity=0.025 Sum_probs=64.2
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+......+...+.. .++..+|++....+-...+ +..+++++..|+..+.... ....+...+++.+++.
T Consensus 47 ~~lTy~~l~~~~~~~a~~L~~--~gi~~gd~V~i~~~n~~~~-~~~~la~~~~G~~~v~v~~~~~~~~~~~~~~~~~~~~ 123 (557)
T PRK07059 47 KAITYGELDELSRALAAWLQS--RGLAKGARVAIMMPNVLQY-PVAIAAVLRAGYVVVNVNPLYTPRELEHQLKDSGAEA 123 (557)
T ss_pred ceeeHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCCHHH-HHHHHHHHhcCeEEeccCcccCHHHHHHHHHccCceE
Confidence 468999999888877765422 3678899988887766432 3356888999999987654 7788889999999999
Q ss_pred EEecchHHHH
Q 010774 316 FSGVPRVYDR 325 (501)
Q Consensus 316 ~~~~P~~~~~ 325 (501)
++....+...
T Consensus 124 vi~~~~~~~~ 133 (557)
T PRK07059 124 IVVLENFATT 133 (557)
T ss_pred EEEchhhHHH
Confidence 9887665443
No 263
>PRK09162 hypoxanthine-guanine phosphoribosyltransferase; Provisional
Probab=27.82 E-value=1.6e+02 Score=25.60 Aligned_cols=50 Identities=8% Similarity=-0.052 Sum_probs=34.1
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI 127 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~ 127 (501)
..+||+|+...+.++|..+.+. +...+.|.+...++-..++..+| -.+|.
T Consensus 15 ~~~s~~~i~~~i~~la~~i~~~-~~~~~~viV~i~~gg~~~A~~La-~~l~~ 64 (181)
T PRK09162 15 CLVSAAEVEAAIDRMADEITAD-LADENPLVLCVMGGGLVFTGQLL-PRLDF 64 (181)
T ss_pred EeecHHHHHHHHHHHHHHHHHH-cCCCCeEEEEECCCcHHHHHHHH-HHcCC
Confidence 4699999999999999999875 22223455655666666656555 33453
No 264
>PLN02479 acetate-CoA ligase
Probab=27.78 E-value=4.3e+02 Score=27.66 Aligned_cols=85 Identities=6% Similarity=-0.091 Sum_probs=65.4
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+......+...+. ..++..+|++....+-.- -.+..+++++..|+..+.... ....+...+++.++..+
T Consensus 45 ~~ty~eL~~~~~~lA~~L~--~~g~~~gd~V~i~~~n~~-~~~~~~la~~~~G~v~v~l~~~~~~~~l~~~l~~~~~~~i 121 (567)
T PLN02479 45 RYTWAQTYQRCRRLASALA--KRSIGPGSTVAVIAPNIP-AMYEAHFGVPMAGAVVNCVNIRLNAPTIAFLLEHSKSEVV 121 (567)
T ss_pred eeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCcH-HHHHHHHHHHhCCcEEEEeccccCHHHHHHHHhhcCceEE
Confidence 5788888888887766552 237889999998888653 223357788999999887765 78889999999999999
Q ss_pred EecchHHHHH
Q 010774 317 SGVPRVYDRI 326 (501)
Q Consensus 317 ~~~P~~~~~l 326 (501)
++.+..+...
T Consensus 122 i~~~~~~~~~ 131 (567)
T PLN02479 122 MVDQEFFTLA 131 (567)
T ss_pred EEchhhhhHH
Confidence 9988766544
No 265
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=27.73 E-value=2.6e+02 Score=29.06 Aligned_cols=86 Identities=9% Similarity=0.055 Sum_probs=64.4
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+.. .++..++++...++-...+ ...+++++..|+..+.... ....+...+++.++..
T Consensus 54 ~~~Ty~~l~~~~~~la~~L~~--~g~~~g~~V~i~~~~~~~~-~~~~lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~ 130 (546)
T PLN02330 54 KAVTYGEVVRDTRRFAKALRS--LGLRKGQVVVVVLPNVAEY-GIVALGIMAAGGVFSGANPTALESEIKKQAEAAGAKL 130 (546)
T ss_pred CcccHHHHHHHHHHHHHHHHH--hCCCCCCEEEEECCCchHH-HHHHHHHHHhCcEeccCCccCCHHHHHHHHHhcCCeE
Confidence 368999998888877665422 3677889988887766533 2357888999998876654 6788889999999999
Q ss_pred EEecchHHHHH
Q 010774 316 FSGVPRVYDRI 326 (501)
Q Consensus 316 ~~~~P~~~~~l 326 (501)
+.+.+.....+
T Consensus 131 ~i~~~~~~~~~ 141 (546)
T PLN02330 131 IVTNDTNYGKV 141 (546)
T ss_pred EEEccchhhhH
Confidence 98887766554
No 266
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=27.70 E-value=2.2e+02 Score=29.83 Aligned_cols=85 Identities=9% Similarity=-0.032 Sum_probs=65.5
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+...+..+...+. ..++..+|++....|-... .+..+++++..|+..+.... ....+.+.+.+.++..+
T Consensus 57 ~~Ty~ql~~~~~~~A~~L~--~~gi~~gd~V~l~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~i 133 (573)
T PRK05605 57 TTTYAELGKQVRRAAAGLR--ALGVRPGDRVAIVLPNCPQ-HIVAFYAVLRLGAVVVEHNPLYTAHELEHPFEDHGARVA 133 (573)
T ss_pred cccHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCCHH-HHHHHHHHHhcCcEEeecCcCCCHHHHHHHHhccCCcEE
Confidence 4788988888877766542 2367889999988877643 23357888999999887764 88999999999999999
Q ss_pred EecchHHHHH
Q 010774 317 SGVPRVYDRI 326 (501)
Q Consensus 317 ~~~P~~~~~l 326 (501)
++.......+
T Consensus 134 i~~~~~~~~~ 143 (573)
T PRK05605 134 IVWDKVAPTV 143 (573)
T ss_pred EechhhHHHH
Confidence 9887766554
No 267
>PLN02614 long-chain acyl-CoA synthetase
Probab=27.07 E-value=6.7e+02 Score=27.02 Aligned_cols=87 Identities=10% Similarity=-0.001 Sum_probs=65.3
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+ ...++..+|++...++-..-+ +...++++..|+..+-... .+..+...++..++.+
T Consensus 78 ~~~Ty~el~~~v~~lA~~L--~~~Gv~~Gd~Vai~~~n~~e~-~~~~lA~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~ 154 (666)
T PLN02614 78 VWQTYQEVYDIVIKLGNSL--RSVGVKDEAKCGIYGANSPEW-IISMEACNAHGLYCVPLYDTLGAGAVEFIISHSEVSI 154 (666)
T ss_pred EEeEHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCEEEEecCCCCHHHHHHHHhccCCCE
Confidence 4578888888887776644 223788999998888876432 2347788999998887654 7889999999999999
Q ss_pred EEecchHHHHHH
Q 010774 316 FSGVPRVYDRIY 327 (501)
Q Consensus 316 ~~~~P~~~~~l~ 327 (501)
+++....+..+.
T Consensus 155 vi~~~~~~~~~~ 166 (666)
T PLN02614 155 VFVEEKKISELF 166 (666)
T ss_pred EEECHHHHHHHH
Confidence 998876655443
No 268
>PLN02356 phosphateglycerate kinase
Probab=26.86 E-value=5.2e+02 Score=26.11 Aligned_cols=63 Identities=14% Similarity=0.027 Sum_probs=45.2
Q ss_pred HHhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 94 MRSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 94 L~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
+.+.|. ++|..|+ .....-.-..+.++|...|..+..+-|...+.+....++..++.+++++.
T Consensus 95 a~~~g~~~~~g~Vv-eaSSGN~g~alA~~aa~~G~~~~ivvP~~~s~~K~~~ir~~GAeVi~v~~ 158 (423)
T PLN02356 95 ALESGQLFPGGVVT-EGSAGSTAISLATVAPAYGCKCHVVIPDDVAIEKSQILEALGATVERVRP 158 (423)
T ss_pred HHhCCccCCCCEEE-EeCCHHHHHHHHHHHHHcCCcEEEEECCCCcHHHHHHHHHcCCEEEEECC
Confidence 344443 4676655 33334446677788888998888877777777778899999999999853
No 269
>PRK10595 SOS cell division inhibitor; Provisional
Probab=26.48 E-value=3.2e+02 Score=23.45 Aligned_cols=66 Identities=11% Similarity=-0.077 Sum_probs=42.8
Q ss_pred HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEec--C-CCCHHHHHH---HHHhcCceEEEE
Q 010774 90 FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--D-TLGANAVEF---IINHAEVSIAFV 155 (501)
Q Consensus 90 ~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~-~~~~~~l~~---~l~~~~~~~vl~ 155 (501)
.+.+|.+.|+..+..+.|...+..+.+-++-=|++.|..-+.+- | ..+.++++. .-+..++-.++.
T Consensus 69 ~~~~L~~~Gl~l~rvl~v~~~~~~d~Lwa~EqaLrsG~~~aVL~Wlp~~l~~~~~RRLQlAAe~g~~l~fl~ 140 (164)
T PRK10595 69 SREWLQASGLPLTKVMQLSQLSPCHTVEAMERALRTGNYSVVLGWLPDELTEEEHARLVDAAQEGNAMGFIM 140 (164)
T ss_pred CHHHHHHcCCCcccEEEEecCCcHHHHHHHHHHHhhCCCcEEEECCcccCCHHHHHHHHHHHHhCCCEEEEE
Confidence 36788889997766666666777888888888888886444443 4 666655543 333444444444
No 270
>PRK07476 eutB threonine dehydratase; Provisional
Probab=26.23 E-value=3.8e+02 Score=25.78 Aligned_cols=49 Identities=12% Similarity=-0.067 Sum_probs=39.1
Q ss_pred CCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 110 SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 110 ~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
..+-.-..+.++|.+.|..+..+-|...+......++..++.+++++..
T Consensus 74 SsGN~g~alA~~a~~~G~~~~i~vp~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T PRK07476 74 STGNHGRALAYAARALGIRATICMSRLVPANKVDAIRALGAEVRIVGRS 122 (322)
T ss_pred CCChHHHHHHHHHHHhCCCEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 4445556677788899998888878777777888899999999999864
No 271
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=25.78 E-value=5.6e+02 Score=26.49 Aligned_cols=104 Identities=13% Similarity=0.022 Sum_probs=69.4
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH---HHHHHHHhcCCEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI---IAMEACNSQAITYV 130 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~---~~~lA~~~~G~~~v 130 (501)
.++.+|++... .+.+|. ...+|.+.+...+..... ..++.++|++...+|-.-.+. ..+++++..|+.++
T Consensus 180 ~~~~~a~i~~T--SGTTG~PKgV~~s~~~l~~~~~~~~~---~~~~~~~~~~l~~~p~~h~~~~~~~~~~~~l~~g~~~~ 254 (536)
T PRK10946 180 PADEVAFFQLS--GGSTGTPKLIPRTHNDYYYSVRRSVE---ICGFTPQTRYLCALPAAHNYPMSSPGALGVFLAGGTVV 254 (536)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hcCCCCCceEEEecCccccccchhhhHHHHhhcCcEEE
Confidence 34566665441 232232 247889988887665544 347889999888877543222 24678888898887
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
.. +..++..+..+++..++.++......+..+.+
T Consensus 255 ~~-~~~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~ 288 (536)
T PRK10946 255 LA-PDPSATLCFPLIEKHQVNVTALVPPAVSLWLQ 288 (536)
T ss_pred EC-CCCCHHHHHHHHHHhCCcEEEeChHHHHHHHh
Confidence 65 44567778888999999999887766655543
No 272
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=25.72 E-value=3.3e+02 Score=21.40 Aligned_cols=45 Identities=7% Similarity=-0.064 Sum_probs=36.1
Q ss_pred hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 114 EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 114 ~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
...+....+...|.-++.+.+..+.+++...+...++++|..+..
T Consensus 15 G~~~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~ 59 (119)
T cd02067 15 GKNIVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGL 59 (119)
T ss_pred HHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecc
Confidence 334444555668999999999999999999999999999988754
No 273
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=25.37 E-value=3.4e+02 Score=26.88 Aligned_cols=25 Identities=16% Similarity=0.009 Sum_probs=12.5
Q ss_pred HHHHHHHHhhCC-CeeeeecccccCc
Q 010774 398 HVEEFLRVTSGA-PLTQGYGLTESCS 422 (501)
Q Consensus 398 ~~~~~~~~~~~~-~l~~~yG~tE~~~ 422 (501)
+...+|.+.+.. .+-..+|..|+..
T Consensus 308 ~~~~~f~~~l~~~~~~~s~G~~~sl~ 333 (382)
T TIGR02080 308 QTVRRFLGGLSLFTLAESLGGVESLI 333 (382)
T ss_pred HHHHHHHHcCCcceEeccCCCCccee
Confidence 334445443332 3445677777654
No 274
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=25.37 E-value=6.8e+02 Score=24.83 Aligned_cols=123 Identities=9% Similarity=-0.017 Sum_probs=70.8
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCC--CCCEEEEE
Q 010774 33 DGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVN--PGDRCGIY 108 (501)
Q Consensus 33 ~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~--~gd~V~i~ 108 (501)
.++..+....+++.+.++-..+.+-+..++++.. .|.+|. ...+|++.+...+..+++.+ ++. ..|++..+
T Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~dr~l~~ 144 (386)
T TIGR02372 70 TGTEDYLLVRRRIGEWVDLIAHHSTPTARFTFAT--SGSTGTPKPVTHSWAALLSEAQAIAKIL---GERPPPVRRVISC 144 (386)
T ss_pred cchhhhhhhhccHHHHHHHHHhcCCCCceEEEEC--CCCCCCCceeEeeHHHHHHHHHHHHHHh---CcCCCCCCeEEEe
Confidence 3344444455667777766655655556665540 233232 24679999988888777655 443 34577777
Q ss_pred cCCch--hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhh
Q 010774 109 GSNCP--EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSI 163 (501)
Q Consensus 109 ~~n~~--~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~ 163 (501)
+|-.- .+...++..+.+|+.++.... .++..+...++.. .+++.....+..+
T Consensus 145 ~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-~~~~~~l~~i~~~--t~~~~~P~~l~~l 198 (386)
T TIGR02372 145 VPAHHLYGFLFSCLLPSRRGLEAKQLAA-APASGIMRHARPG--DLIVGTPFIWEQL 198 (386)
T ss_pred CCcHHHHHHHHHHHHHHHCCCeEEecCC-CChHHHHHhhccC--CEEEECcHHHHHH
Confidence 77542 334455667788988877654 5555544444322 4555555444444
No 275
>PF04122 CW_binding_2: Putative cell wall binding repeat 2; InterPro: IPR007253 This repeat is found in multiple tandem copies in proteins including amidase enhancers [] and adhesins [].
Probab=25.32 E-value=2.9e+02 Score=20.60 Aligned_cols=69 Identities=10% Similarity=0.199 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCEEEEE-cCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 84 YDAAIRFGSAMRSRGVNPGDRCGIY-GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 84 ~~~v~~~A~~L~~~gv~~gd~V~i~-~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
++-+..++..+...+ .-+.|.|. ..+-++.+.+.--+.+.++.+++.+ ..-++.....|+..+.+-+++
T Consensus 9 yeTs~~va~~~~~~~--~~~~v~ia~g~~~~Dalsa~~~a~~~~~PIll~~-~~l~~~~~~~l~~~~~~~v~i 78 (92)
T PF04122_consen 9 YETSAKVAKKFYPDN--KSDKVYIASGDNFADALSASPLAAKNNAPILLVN-NSLPSSVKAFLKSLNIKKVYI 78 (92)
T ss_pred HHHHHHHHHHhcccC--CCCEEEEEeCcchhhhhhhHHHHHhcCCeEEEEC-CCCCHHHHHHHHHcCCCEEEE
Confidence 344555666654432 34445554 4444665555555556788888888 544477777777765544443
No 276
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=24.46 E-value=4.1e+02 Score=28.63 Aligned_cols=88 Identities=10% Similarity=0.026 Sum_probs=66.6
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+ ...++..+|++...++-..-+ +...++++..|+..+-... ....+...+++.++++
T Consensus 76 ~~~Ty~el~~~v~~lA~~L--~~~Gv~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 152 (660)
T PLN02861 76 VWLTYKEVYDAAIRIGSAI--RSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQGITYVPLYDTLGANAVEFIINHAEVSI 152 (660)
T ss_pred eEEEHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHcCCCCE
Confidence 4689999988888776654 223688999998888876432 3357788999999887654 7888999999999999
Q ss_pred EEecchHHHHHHH
Q 010774 316 FSGVPRVYDRIYT 328 (501)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (501)
+++....+..+..
T Consensus 153 v~~~~~~~~~~~~ 165 (660)
T PLN02861 153 AFVQESKISSILS 165 (660)
T ss_pred EEECHHHHHHHHH
Confidence 9987766555443
No 277
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=24.44 E-value=6.4e+02 Score=25.27 Aligned_cols=63 Identities=10% Similarity=0.050 Sum_probs=32.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHH---------HHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 99 VNPGDRCGIYGSNCPEWIIAME---------ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~l---------A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
+++||+|..+...+=.++..-. .......+..++++ ..+-+++..+.+..+|++|++......
T Consensus 107 l~pGD~Im~l~l~~GGHlshg~~~~~~~~~~~~~~~~~~~y~~d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~ 181 (399)
T PF00464_consen 107 LKPGDTIMGLSLPHGGHLSHGSSVNFKKISASGLYFESVPYPVDPDTGLIDYDELEKLAKEHKPKLIICGASSYP 181 (399)
T ss_dssp T-TT-EEEEEEGGGT--GGGT-TTSHSBSSHHHHHSEEEEEEB-TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS
T ss_pred HhhcCcEEecChhhcccccccccccccccccccceEEEEeeeeecCCCeECHHHHHHHHhhcCCCEEEECchhcc
Confidence 4677777766655432221111 22222334455663 357778899999999999999986543
No 278
>PRK13391 acyl-CoA synthetase; Provisional
Probab=24.31 E-value=5.6e+02 Score=26.24 Aligned_cols=99 Identities=11% Similarity=0.008 Sum_probs=71.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++...++ -.+|...+......+...+.. .++..++++....+-...+ +..+++++..|+..+...
T Consensus 11 p~~~a~~~~~~~-------~~~ty~~l~~~~~~la~~L~~--~g~~~~~~V~v~~~~~~~~-~~~~~a~~~~G~~~~~l~ 80 (511)
T PRK13391 11 PDKPAVIMASTG-------EVVTYRELDERSNRLAHLFRS--LGLKRGDHVAIFMENNLRY-LEVCWAAERSGLYYTCVN 80 (511)
T ss_pred CCceEEEecCCC-------CEeeHHHHHHHHHHHHHHHHH--cCCCCCCEEEEECCCCHHH-HHHHHHHHHhccEEeccc
Confidence 566676654332 248888888887777665422 2667788888877766432 334778899999988776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 327 (501)
. ....+...+++.++..+.+.+.....+.
T Consensus 81 ~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 111 (511)
T PRK13391 81 SHLTPAEAAYIVDDSGARALITSAAKLDVAR 111 (511)
T ss_pred cccCHHHHHHHHhccCCcEEEEchhhHHHHH
Confidence 4 7888899999999999999887665543
No 279
>PF00818 Ice_nucleation: Ice nucleation protein repeat; InterPro: IPR000258 Certain Gram-negative bacteria express proteins that enable them to promote nucleation of ice at relatively high temperatures (above -5C) [, ]. These proteins are localised at the outer membrane surface and can cause frost damage to many plants. The primary structure of the proteins contains a highly repetitive domain that dominates the sequence. The domain comprises a number of 48-residue repeats, which themselves contain 3 blocks of 16 residues, the first 8 of which are identical. It is thought that the repetitive domain may be responsible for aligning water molecules in the seed crystal. [.........48.residues.repeated.domain..........] / / | | \ \ AGYGSTxTagxxssli AGYGSTxTagxxsxlt AGYGSTxTaqxxsxlt [16.residues...] [16.residues...] [16.residues...] ; GO: 0009279 cell outer membrane
Probab=24.29 E-value=33 Score=16.57 Aligned_cols=9 Identities=44% Similarity=0.944 Sum_probs=6.6
Q ss_pred eecccccCc
Q 010774 414 GYGLTESCS 422 (501)
Q Consensus 414 ~yG~tE~~~ 422 (501)
+||+|++..
T Consensus 1 GYGSTqTA~ 9 (16)
T PF00818_consen 1 GYGSTQTAG 9 (16)
T ss_pred CCCcccccC
Confidence 488888754
No 280
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=24.17 E-value=3.3e+02 Score=27.06 Aligned_cols=26 Identities=12% Similarity=-0.107 Sum_probs=13.7
Q ss_pred HHHHHHHHHhhCC-CeeeeecccccCc
Q 010774 397 IHVEEFLRVTSGA-PLTQGYGLTESCS 422 (501)
Q Consensus 397 ~~~~~~~~~~~~~-~l~~~yG~tE~~~ 422 (501)
.+...+|.+.+.. .+-..+|.+|+..
T Consensus 310 ~~~~~~~~~~l~l~~~~~s~G~~~sl~ 336 (385)
T PRK08574 310 RDAVLKFLRSLKLIKPSPSLGGVESLA 336 (385)
T ss_pred HHHHHHHHHcCCcceEccCCCCCccee
Confidence 3444555554333 2345677777654
No 281
>KOG1250 consensus Threonine/serine dehydratases [Amino acid transport and metabolism]
Probab=24.11 E-value=2.8e+02 Score=27.49 Aligned_cols=54 Identities=9% Similarity=-0.111 Sum_probs=44.6
Q ss_pred EEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010774 105 CGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (501)
Q Consensus 105 V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~ 160 (501)
|+-...| ....+.+++.++|..+..+=|..++......++..++.+++..+...
T Consensus 118 iasSaGN--ha~a~Ayaa~~LgipaTIVmP~~tp~~kiq~~~nlGA~Vil~G~~~d 171 (457)
T KOG1250|consen 118 IASSAGN--HAQAAAYAARKLGIPATIVMPVATPLMKIQRCRNLGATVILSGEDWD 171 (457)
T ss_pred EEecCcc--HHHHHHHHHHhcCCceEEEecCCChHHHHHHHhccCCEEEEecccHH
Confidence 4444444 56678899999999999999999999999999999999999877543
No 282
>PRK07470 acyl-CoA synthetase; Validated
Probab=23.48 E-value=7.8e+02 Score=25.25 Aligned_cols=123 Identities=11% Similarity=-0.012 Sum_probs=71.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEe-
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL- 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l- 132 (501)
.++.++++... .+.+|. ...+|.+.+...+......+. .++.++|++..++|-+-.+-...+..+..|+..+.+
T Consensus 161 ~~~~~a~i~~T--SGTTG~PK~v~~s~~~l~~~~~~~~~~~~-~~~~~~d~~l~~~p~~~~~~~~~~~~~~~g~~~~~~~ 237 (528)
T PRK07470 161 DHDDPCWFFFT--SGTTGRPKAAVLTHGQMAFVITNHLADLM-PGTTEQDASLVVAPLSHGAGIHQLCQVARGAATVLLP 237 (528)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEEehhhHHHHHHHHHHHhc-cCCCcccEEEEeccchhHHHHHHHHHHhcCceEEEec
Confidence 34566666551 222232 246788887644333222111 257788999888886544333334445556555444
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---cCCCCccEEEEec
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFA 181 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~v~~~~ 181 (501)
....+++++...++..++..+++....+..+.+... .....++.++.-+
T Consensus 238 ~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG 289 (528)
T PRK07470 238 SERFDPAEVWALVERHRVTNLFTVPTILKMLVEHPAVDRYDHSSLRYVIYAG 289 (528)
T ss_pred ccCcCHHHHHHHHHhcCCeEEechHHHHHHHHhCcCcCCCCCcceEEEEEcC
Confidence 346788999999999999999988877665543321 1223455554444
No 283
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=23.14 E-value=8.4e+02 Score=25.78 Aligned_cols=103 Identities=13% Similarity=0.037 Sum_probs=71.6
Q ss_pred CCCeEEEEec--CCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEE
Q 010774 219 KTNISTIMYT--SGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGF 296 (501)
Q Consensus 219 ~~~~~~i~~T--SGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~ 296 (501)
++.++++... .+++|. ...+|...+......+...+.. .+..+|++...++-..- .+..+++++..|+..+.
T Consensus 48 ~~~~a~~~~~~~~~~~g~--~~~~Ty~el~~~~~~lA~~L~~---~~~~gd~V~l~~~n~~e-~~~~~lA~~~aG~v~vp 121 (612)
T PRK12476 48 GDTVAYRYLDHSHSAAGC--AVELTWTQLGVRLRAVGARLQQ---VAGPGDRVAILAPQGID-YVAGFFAAIKAGTIAVP 121 (612)
T ss_pred CCceEEEEEccCCCCCCc--ceEEeHHHHHHHHHHHHHHHHH---hcCCCCEEEEECCCChh-HHHHHHHHHHcCceeEe
Confidence 4566765432 112232 3468999999888887776522 26788999988887743 23357789999998875
Q ss_pred e-cC----CHHHHHHHHhhhcCcEEEecchHHHHHH
Q 010774 297 W-RG----DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (501)
Q Consensus 297 ~-~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 327 (501)
. .. .+..+...++..++..+++.+.....+.
T Consensus 122 l~~~~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~ 157 (612)
T PRK12476 122 LFAPELPGHAERLDTALRDAEPTVVLTTTAAAEAVE 157 (612)
T ss_pred cCCCCcchhHHHHHHHHHhCCCCEEEEcHHHHHHHH
Confidence 5 22 2678888999999999999887766543
No 284
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=23.05 E-value=3.6e+02 Score=27.54 Aligned_cols=85 Identities=18% Similarity=0.024 Sum_probs=56.2
Q ss_pred CCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcC
Q 010774 263 CSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSG 337 (501)
Q Consensus 263 ~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~ 337 (501)
...+|+++.-.|-|+..-. ..-..|..++-++- +++.+.+.++++++..++++|++-+=.-.- -+
T Consensus 176 ~~pGd~v~vE~PtY~~~~~----~~~~~g~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~t------ms 245 (459)
T COG1167 176 LDPGDTVLVEDPTYPGALQ----ALEALGARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVT------MS 245 (459)
T ss_pred CCCCCEEEEcCCCcHHHHH----HHHHcCCcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCc------cC
Confidence 5589999999998864322 22345666665542 899999999999999999999865322110 11
Q ss_pred ChhHHHHHHHHHHHHhhhhc
Q 010774 338 GALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 338 ~~~~~~~~~~~~~~~~~~~~ 357 (501)
..-.+.+.++++++.+--+.
T Consensus 246 ~~rR~~Ll~lA~~~~~~IIE 265 (459)
T COG1167 246 LERRKALLALAEKYDVLIIE 265 (459)
T ss_pred HHHHHHHHHHHHHcCCeEEe
Confidence 12345677777766655543
No 285
>PRK13382 acyl-CoA synthetase; Provisional
Probab=23.05 E-value=7.3e+02 Score=25.65 Aligned_cols=85 Identities=12% Similarity=0.029 Sum_probs=57.4
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
.+|++.+...+ ...+...++.++|++....|-.-.+ +..+++.+..|+.++.. +..+++++...++..++..+..
T Consensus 215 ~~s~~~~~~~~---~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~g~~~~~~-~~~~~~~~~~~i~~~~vt~~~~ 290 (537)
T PRK13382 215 RRSGPGGIGTL---KAILDRTPWRAEEPTVIVAPMFHAWGFSQLVLAASLACTIVTR-RRFDPEATLDLIDRHRATGLAV 290 (537)
T ss_pred EeccchHHHHH---HHHHHhhCCCCCCeEEEecChHhhhHHHHHHHHHhcCcEEEEC-CCcCHHHHHHHHHHhCCEEEEe
Confidence 45554444333 3334445778899987776643322 23457777788887654 5678999999999999999998
Q ss_pred cCCChhhhhh
Q 010774 156 QENKIPSILS 165 (501)
Q Consensus 156 ~~~~~~~~~~ 165 (501)
....+..+.+
T Consensus 291 ~P~~~~~l~~ 300 (537)
T PRK13382 291 VPVMFDRIMD 300 (537)
T ss_pred hHHHHHHHHc
Confidence 8776665543
No 286
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=22.69 E-value=4.4e+02 Score=21.71 Aligned_cols=47 Identities=13% Similarity=0.035 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHH-HhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchH
Q 010774 276 AHIYDQIIETHC-IHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 276 ~~~~g~~~~~~~-l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
.|..|...+... =..|..++-... .++.++++..++++..+..+.-+
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~ 62 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLY 62 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEeccc
Confidence 466666543333 346666766554 89999999999999988765543
No 287
>PRK07867 acyl-CoA synthetase; Validated
Probab=22.62 E-value=3.4e+02 Score=28.12 Aligned_cols=85 Identities=6% Similarity=-0.155 Sum_probs=62.8
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+......+...+... .+...++++....+-.- -....+++++..|+.++.... .+..+...+++.+++.+
T Consensus 28 ~~Ty~el~~~v~~lA~~L~~~-~~~~~~~~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~l 105 (529)
T PRK07867 28 FTSWREHIRGSAARAAALRAR-LDPTRPPHVGVLLDNTP-EFSLLLGAAALSGIVPVGLNPTRRGAALARDIAHADCQLV 105 (529)
T ss_pred EEeHHHHHHHHHHHHHHHHHh-hCCCCCCEEEEECCCCH-HHHHHHHHHHhcCCEEEEecCCCChHHHHHHHHhCCCeEE
Confidence 589999988888877665221 13456777777776543 223357889999999987765 78889999999999999
Q ss_pred EecchHHHH
Q 010774 317 SGVPRVYDR 325 (501)
Q Consensus 317 ~~~P~~~~~ 325 (501)
++.......
T Consensus 106 i~~~~~~~~ 114 (529)
T PRK07867 106 LTESAHAEL 114 (529)
T ss_pred EECHhHHHH
Confidence 998876654
No 288
>cd01448 TST_Repeat_1 Thiosulfate sulfurtransferase (TST), N-terminal, inactive domain. TST contains 2 copies of the Rhodanese Homology Domain; this is the 1st repeat, which does not contain the catalytically active Cys residue. The role of the 1st repeat is uncertain, but it is believed to be involved in protein interaction.
Probab=22.61 E-value=2.4e+02 Score=22.27 Aligned_cols=41 Identities=15% Similarity=0.024 Sum_probs=30.8
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCC-chhHHHHHHHHHhcCCE
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSN-CPEWIIAMEACNSQAIT 128 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~ 128 (501)
..+.+.+.+.|+.+++.|++++.. +.....+...+...|..
T Consensus 65 ~~~~~~~~~~~~~~~~~vv~~c~~g~~~a~~~~~~l~~~G~~ 106 (122)
T cd01448 65 EEFAELLGSLGISNDDTVVVYDDGGGFFAARAWWTLRYFGHE 106 (122)
T ss_pred HHHHHHHHHcCCCCCCEEEEECCCCCccHHHHHHHHHHcCCC
Confidence 345566777789899999999988 46666667777777854
No 289
>PRK05638 threonine synthase; Validated
Probab=21.96 E-value=2.8e+02 Score=28.15 Aligned_cols=57 Identities=5% Similarity=-0.180 Sum_probs=39.5
Q ss_pred CEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010774 103 DRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (501)
Q Consensus 103 d~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~ 160 (501)
+.|+. ...+-.-..+.++|.++|..+..+-|...+..-...++..++++++++....
T Consensus 113 ~~vv~-aSsGN~g~alA~~aa~~G~~~~i~vp~~~~~~k~~~~~~~GA~vi~v~~~~~ 169 (442)
T PRK05638 113 NGFIV-ASDGNAAASVAAYSARAGKEAFVVVPRKVDKGKLIQMIAFGAKIIRYGESVD 169 (442)
T ss_pred CEEEE-eCCChHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHhcCcEEEEECCCHH
Confidence 44544 4444444555566678888877776666666677889999999999986543
No 290
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=21.90 E-value=4.6e+02 Score=26.01 Aligned_cols=26 Identities=15% Similarity=-0.037 Sum_probs=13.0
Q ss_pred HHHHHHHHHhhCC-CeeeeecccccCc
Q 010774 397 IHVEEFLRVTSGA-PLTQGYGLTESCS 422 (501)
Q Consensus 397 ~~~~~~~~~~~~~-~l~~~yG~tE~~~ 422 (501)
.+...+|.+.+.. .+-..+|..|+..
T Consensus 308 ~~~~~~f~~~l~~~~~~~s~G~~~sl~ 334 (386)
T PRK08045 308 EQTLRRFLGGLSLFTLAESLGGVESLI 334 (386)
T ss_pred HHHHHHHHHhccceeEeccCCCCceeE
Confidence 3444455554332 2344677777654
No 291
>cd01563 Thr-synth_1 Threonine synthase is a pyridoxal phosphate (PLP) dependent enzyme that catalyses the last reaction in the synthesis of threonine from aspartate. It proceeds by converting O-phospho-L-homoserine (OPH) into threonine and inorganic phosphate. In plants, OPH is an intermediate between the methionine and threonine/isoleucine pathways. Thus threonine synthase competes for OPH with cystathionine-gamma-synthase, the first enzyme in the methionine pathway. These enzymes are in general dimers. Members of this CD, Thr-synth_1, are widely distributed in bacteria, archaea and higher plants.
Probab=21.85 E-value=3.1e+02 Score=26.31 Aligned_cols=57 Identities=9% Similarity=-0.154 Sum_probs=39.8
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
++.|.... .+-.-..+.++|...|..+..+-|...+......++..++++++++...
T Consensus 70 ~~~vv~~S-sGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~GA~Vi~~~~~~ 126 (324)
T cd01563 70 VKAVACAS-TGNTSASLAAYAARAGIKCVVFLPAGKALGKLAQALAYGATVLAVEGNF 126 (324)
T ss_pred CCEEEEeC-CCHHHHHHHHHHHHcCCceEEEEeCCCCHHHHHHHHHcCCEEEEECCcH
Confidence 45555553 2333334447888899888777666666777788999999999998643
No 292
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=21.64 E-value=8.4e+02 Score=25.09 Aligned_cols=95 Identities=6% Similarity=-0.047 Sum_probs=60.4
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCC-CCCEEEEEcCCch-hHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVN-PGDRCGIYGSNCP-EWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~-~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .+.+|. ...+|++.+...+..++.. .++. ++|++...+|-.- -.+..+++.+..|+.++.
T Consensus 150 ~~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~g~~~~~~~l~~G~~~~~ 224 (525)
T PRK05851 150 DSGGPAVLQGT--AGSTGTPRTAILSPGAVLSNLRGLNAR---VGLDAATDVGCSWLPLYHDMGLAFLLTAALAGAPLWL 224 (525)
T ss_pred CCCCeEEEEeC--CCCCCCCcEEEecHHHHHHHHHHHHHH---hCCCCCCCeEEEcCCCccCccHHHHHHHHHcCCeEEE
Confidence 45666766540 222221 2467898887776665543 4676 8898888887542 223456778888988877
Q ss_pred ecC-CC--CHHHHHHHHHhcCceEEEE
Q 010774 132 LYD-TL--GANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 132 l~~-~~--~~~~l~~~l~~~~~~~vl~ 155 (501)
..+ .. .+..+...++..++..+.+
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~~~t~~~~ 251 (525)
T PRK05851 225 APTTAFSASPFRWLSWLSDSRATLTAA 251 (525)
T ss_pred cCHHHHHHCHHHHHHHHHHhCCeEEeC
Confidence 653 12 4567788888888886644
No 293
>cd01562 Thr-dehyd Threonine dehydratase: The first step in amino acid degradation is the removal of nitrogen. Although the nitrogen atoms of most amino acids are transferred to alpha-ketoglutarate before removal, the alpha-amino group of threonine can be directly converted into NH4+. The direct deamination is catalyzed by threonine dehydratase, in which pyridoxal phosphate (PLP) is the prosthetic group. Threonine dehydratase is widely distributed in all three major phylogenetic divisions.
Probab=21.19 E-value=4.1e+02 Score=25.10 Aligned_cols=56 Identities=9% Similarity=-0.127 Sum_probs=41.3
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
++.|+.. ..+-.-..+.++|.+.|..++.+-|...+.+....++..++++++++..
T Consensus 65 ~~~iv~~-ssGN~g~alA~~a~~~G~~~~ivvp~~~~~~k~~~l~~~Ga~vi~~~~~ 120 (304)
T cd01562 65 AKGVVAA-SAGNHAQGVAYAAKLLGIPATIVMPETAPAAKVDATRAYGAEVVLYGED 120 (304)
T ss_pred CCcEEEE-CCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 3444444 4455666667778889988877777666777788899999999998865
No 294
>PF05221 AdoHcyase: S-adenosyl-L-homocysteine hydrolase; InterPro: IPR000043 Adenosylhomocysteinase (S-adenosyl-L-homocysteine hydrolase, 3.3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. This enzyme is ubiquitous, highly conserved, and may play a key role in the regulation of the intracellular concentration of adenosylhomocysteine. AdoHcyase requires NAD+ as a cofactor and contains a central glycine-rich region which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity, 0006730 one-carbon metabolic process; PDB: 3N58_B 3H9U_C 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 1K0U_F 1B3R_A 1XWF_D ....
Probab=21.12 E-value=5.9e+02 Score=23.80 Aligned_cols=68 Identities=6% Similarity=-0.133 Sum_probs=47.7
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEE--EecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYV--PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v--~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
.--+|-+|+.++.-.++..+.+..+..+|+-+. .-||..+-++....|...+..+.-...+..+....
T Consensus 39 kPl~G~rIa~cLHle~kTA~L~~tL~a~GAeV~~~~sNplSTQDdvaAAL~~~Gi~V~A~~get~eey~~ 108 (268)
T PF05221_consen 39 KPLKGARIAGCLHLEAKTAVLAETLKALGAEVRWTGSNPLSTQDDVAAALAEEGIPVFAWKGETDEEYWW 108 (268)
T ss_dssp -TTTTEEEEEES--SHHHHHHHHHHHHTTEEEEEEESSTTT--HHHHHHHHHTTEEEEE-TT--HHHHHH
T ss_pred CCCCCCEEEEEEechHHHHHHHHHHHHcCCeEEEecCCCcccchHHHHHhccCCceEEEeCCCCHHHHHH
Confidence 345799999999999999999999999999775 44777888899999998888665544444444333
No 295
>PRK06382 threonine dehydratase; Provisional
Probab=21.10 E-value=5.7e+02 Score=25.62 Aligned_cols=51 Identities=6% Similarity=-0.118 Sum_probs=38.9
Q ss_pred cCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 109 GSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 109 ~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
...+-.-..+.++|...|..+..+-|...+......++..++.++++....
T Consensus 79 aSsGN~g~a~A~aa~~~G~~~~ivmp~~~~~~k~~~~~~~GA~Vv~~~~~~ 129 (406)
T PRK06382 79 ASAGNHAQGVAYAASINGIDAKIVMPEYTIPQKVNAVEAYGAHVILTGRDY 129 (406)
T ss_pred ECCCHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCEEEEECCCH
Confidence 333444555678888999988888777777777788999999999988753
No 296
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=20.77 E-value=3.7e+02 Score=25.83 Aligned_cols=58 Identities=21% Similarity=0.166 Sum_probs=37.8
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
+...++++|++|.|...-..-.+++.+ +...|+.++.+... .+. ..++++.+++.++-
T Consensus 158 ~~~~~~~~g~~VlV~G~g~iG~~a~~~-a~~~G~~vi~~~~~--~~~-~~~a~~~Ga~~vi~ 215 (329)
T TIGR02822 158 LLRASLPPGGRLGLYGFGGSAHLTAQV-ALAQGATVHVMTRG--AAA-RRLALALGAASAGG 215 (329)
T ss_pred HHhcCCCCCCEEEEEcCCHHHHHHHHH-HHHCCCeEEEEeCC--hHH-HHHHHHhCCceecc
Confidence 444678999999999875565554444 44568765555432 333 45677888877663
No 297
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=20.75 E-value=4.5e+02 Score=28.56 Aligned_cols=88 Identities=10% Similarity=0.073 Sum_probs=66.7
Q ss_pred EEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcE
Q 010774 238 VVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTM 315 (501)
Q Consensus 238 v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~ 315 (501)
..+|...+...+..+...+ ...++..+|++...++-..-+ +...++++..|+..+-... .+..+...+...++++
T Consensus 105 ~~~Ty~el~~~v~~lA~~L--~~lG~~~gd~Vai~~~n~~e~-~~~~lA~~~~G~v~vpl~~~~~~~~l~~il~~s~~~~ 181 (696)
T PLN02387 105 EWITYGQVFERVCNFASGL--VALGHNKEERVAIFADTRAEW-LIALQGCFRQNITVVTIYASLGEEALCHSLNETEVTT 181 (696)
T ss_pred EEEEHHHHHHHHHHHHHHH--HHhCCCCCCEEEEEcCCCHHH-HHHHHHHHHcCCeEEEecCCCCHHHHHHHHHccCCCE
Confidence 4578888888887766643 223778999998887765432 2347788899999886654 8889999999999999
Q ss_pred EEecchHHHHHHH
Q 010774 316 FSGVPRVYDRIYT 328 (501)
Q Consensus 316 ~~~~P~~~~~l~~ 328 (501)
+++....+..+.+
T Consensus 182 li~~~~~~~~l~~ 194 (696)
T PLN02387 182 VICDSKQLKKLID 194 (696)
T ss_pred EEECHHHHHHHHH
Confidence 9998877776654
No 298
>PLN02409 serine--glyoxylate aminotransaminase
Probab=20.57 E-value=6.2e+02 Score=25.14 Aligned_cols=70 Identities=7% Similarity=-0.088 Sum_probs=34.3
Q ss_pred HHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHH-HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 87 AIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIA-MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 87 v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~-~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
.+.+...|.++ |...++ ++++..++...+.+ +..++..|-.++..++.........+++..+++++.+..
T Consensus 44 ~~~~~~~l~~~~g~~~~~-~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~~~~~~~~~g~~v~~v~~ 115 (401)
T PLN02409 44 TKELLEDVKYIFKTKSGT-PFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLLWIDQMQRLNFDVDVVES 115 (401)
T ss_pred HHHHHHHHHHHhCCCCCC-EEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHHHHHHHHHcCCceEEEEC
Confidence 33333333332 444334 33444444443333 334445666666656544444445566666777766653
No 299
>cd02070 corrinoid_protein_B12-BD B12 binding domain of corrinoid proteins. A family of small methanogenic corrinoid proteins that bind methyl-Co(III) 5-hydroxybenzimidazolylcobamide as a cofactor. They play a role on the methanogenesis from trimethylamine, dimethylamine or monomethylamine, which is initiated by a series of corrinoid-dependent methyltransferases.
Probab=20.56 E-value=5.9e+02 Score=22.43 Aligned_cols=81 Identities=7% Similarity=-0.065 Sum_probs=57.9
Q ss_pred EeeHHHHHHHHHHHHHHHHhC-------CCCCCCEEEEEcCCc----hhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHH
Q 010774 77 WLTYQEVYDAAIRFGSAMRSR-------GVNPGDRCGIYGSNC----PEWIIAMEACNSQAITYVPLYDTLGANAVEFII 145 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~~-------gv~~gd~V~i~~~n~----~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 145 (501)
.++..|.+-.++.+-..|... +...+-+|.+.+..+ ....++...+...|.-++.+....+.+++...+
T Consensus 50 ~i~va~e~~as~~~~~~l~~l~~~~~~~~~~~~~~vl~~~~~gd~H~lG~~~v~~~l~~~G~~vi~lG~~~p~~~l~~~~ 129 (201)
T cd02070 50 EIFVPELLMAADAMKAGLDLLKPLLGKSKSAKKGKVVIGTVEGDIHDIGKNLVATMLEANGFEVIDLGRDVPPEEFVEAV 129 (201)
T ss_pred CeeHHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCeEEEEecCCccchHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 588888887777655544321 221244666655543 334455566678999999999999999999999
Q ss_pred HhcCceEEEEcC
Q 010774 146 NHAEVSIAFVQE 157 (501)
Q Consensus 146 ~~~~~~~vl~~~ 157 (501)
...++++|..+.
T Consensus 130 ~~~~~d~v~lS~ 141 (201)
T cd02070 130 KEHKPDILGLSA 141 (201)
T ss_pred HHcCCCEEEEec
Confidence 999999998876
No 300
>PRK08162 acyl-CoA synthetase; Validated
Probab=20.29 E-value=4e+02 Score=27.56 Aligned_cols=86 Identities=9% Similarity=-0.052 Sum_probs=66.4
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+......+...+. ..+...+|++....|-... .+..+++++..|+..+.... ....+...++..+++.+
T Consensus 43 ~~ty~~L~~~~~~~a~~L~--~~g~~~g~~v~i~~~~~~~-~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~l~~~~~~~i 119 (545)
T PRK08162 43 RRTWAETYARCRRLASALA--RRGIGRGDTVAVLLPNIPA-MVEAHFGVPMAGAVLNTLNTRLDAASIAFMLRHGEAKVL 119 (545)
T ss_pred EEEHHHHHHHHHHHHHHHH--HhCCCCCCEEEEECCCchH-HHHHHHHHHHhCcEEeccccccChHHHHHHHHhCCCeEE
Confidence 5899999888887776552 2367889999888877642 23357888999998887665 78889999999999999
Q ss_pred EecchHHHHHH
Q 010774 317 SGVPRVYDRIY 327 (501)
Q Consensus 317 ~~~P~~~~~l~ 327 (501)
+..+.....+.
T Consensus 120 ~~~~~~~~~~~ 130 (545)
T PRK08162 120 IVDTEFAEVAR 130 (545)
T ss_pred EEccchhhHHH
Confidence 99887766543
No 301
>PLN02550 threonine dehydratase
Probab=20.14 E-value=1.1e+03 Score=25.20 Aligned_cols=59 Identities=7% Similarity=-0.083 Sum_probs=43.3
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI 160 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~ 160 (501)
..+| .|. ...+-....+.++|.++|..+..+-|...+......++..++.++++.....
T Consensus 156 ~~~G-VV~--aSaGNhAqgvA~aA~~lGika~IvmP~~tp~~Kv~~~r~~GAeVvl~g~~~d 214 (591)
T PLN02550 156 LDKG-VIC--SSAGNHAQGVALSAQRLGCDAVIAMPVTTPEIKWQSVERLGATVVLVGDSYD 214 (591)
T ss_pred CCCC-EEE--ECCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEeCCCHH
Confidence 4555 333 4444455566778999999888777777777777888999999999987543
No 302
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=20.08 E-value=5e+02 Score=26.29 Aligned_cols=62 Identities=13% Similarity=0.170 Sum_probs=33.1
Q ss_pred EEEcCCchhHHH-HHHHHHhcCCEEEEecCCCC--HHHHHHHHHhcCceEEEEcCCChhhhhhcC
Q 010774 106 GIYGSNCPEWII-AMEACNSQAITYVPLYDTLG--ANAVEFIINHAEVSIAFVQENKIPSILSCL 167 (501)
Q Consensus 106 ~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~--~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~ 167 (501)
+++..+..+.+. ++.++++.|-.++..+..+. ..-+...+...++++.+++....+.+.+.+
T Consensus 82 av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i 146 (433)
T PRK08134 82 AIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAI 146 (433)
T ss_pred EEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhc
Confidence 355666655543 34455666655544444443 223344456677777777765444444433
Done!