Query 010774
Match_columns 501
No_of_seqs 170 out of 1581
Neff 10.0
Searched_HMMs 29240
Date Mon Mar 25 13:58:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010774.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010774hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ni2_A 4-coumarate:COA ligase; 100.0 4.6E-60 1.6E-64 491.4 33.7 407 21-500 4-418 (536)
2 3g7s_A Long-chain-fatty-acid-- 100.0 3.4E-59 1.2E-63 486.2 39.5 395 37-500 13-423 (549)
3 1v25_A Long-chain-fatty-acid-C 100.0 9.5E-59 3.3E-63 481.8 40.3 389 41-500 16-419 (541)
4 3rix_A Luciferase, luciferin 4 100.0 4.2E-59 1.4E-63 485.7 35.6 398 39-500 16-423 (550)
5 3o83_A Peptide arylation enzym 100.0 8.3E-59 2.8E-63 482.6 36.9 385 42-500 29-423 (544)
6 3etc_A AMP-binding protein; ad 100.0 1.7E-58 5.7E-63 482.9 37.7 391 40-500 53-459 (580)
7 3r44_A Fatty acyl COA syntheta 100.0 9.3E-59 3.2E-63 479.3 32.5 383 40-500 13-397 (517)
8 1mdb_A 2,3-dihydroxybenzoate-A 100.0 9.4E-59 3.2E-63 481.7 32.1 382 42-500 24-414 (539)
9 2d1s_A Luciferase, luciferin 4 100.0 1.3E-57 4.5E-62 473.8 35.9 405 23-500 9-425 (548)
10 3t5a_A Long-chain-fatty-acid-- 100.0 1.2E-58 4E-63 475.2 27.6 387 41-500 22-467 (480)
11 3c5e_A Acyl-coenzyme A synthet 100.0 4.7E-57 1.6E-61 471.3 38.4 388 41-500 36-440 (570)
12 3ivr_A Putative long-chain-fat 100.0 1.8E-57 6.3E-62 469.2 34.8 376 41-500 4-382 (509)
13 4gr5_A Non-ribosomal peptide s 100.0 4.1E-57 1.4E-61 472.5 35.7 366 40-500 72-453 (570)
14 1t5h_X 4-chlorobenzoyl COA lig 100.0 5.8E-57 2E-61 464.8 35.4 371 42-500 1-386 (504)
15 2v7b_A Benzoate-coenzyme A lig 100.0 5E-57 1.7E-61 468.2 34.6 387 41-500 22-413 (529)
16 1pg4_A Acetyl-COA synthetase; 100.0 3.2E-57 1.1E-61 479.6 33.1 400 43-500 76-501 (652)
17 4fuq_A Malonyl COA synthetase; 100.0 1.6E-57 5.4E-62 468.4 29.6 377 47-500 4-383 (503)
18 1ry2_A Acetyl-coenzyme A synth 100.0 7.6E-57 2.6E-61 477.0 32.7 401 43-500 82-510 (663)
19 3tsy_A Fusion protein 4-coumar 100.0 1.6E-56 5.6E-61 495.8 34.8 419 14-500 36-465 (979)
20 3fce_A D-alanine--poly(phospho 100.0 3.7E-57 1.3E-61 467.3 26.7 369 43-500 1-384 (512)
21 4dg8_A PA1221; ANL superfamily 100.0 6.8E-56 2.3E-60 465.8 36.2 363 41-500 25-403 (620)
22 3e7w_A D-alanine--poly(phospho 100.0 2.5E-56 8.7E-61 460.8 31.6 368 43-500 1-383 (511)
23 3rg2_A Enterobactin synthase c 100.0 6.3E-56 2.2E-60 467.6 34.6 384 42-500 26-418 (617)
24 3l8c_A D-alanine--poly(phospho 100.0 4.4E-56 1.5E-60 460.4 30.8 369 42-500 3-387 (521)
25 1amu_A GRSA, gramicidin synthe 100.0 3.6E-55 1.2E-59 456.4 34.0 364 42-500 38-414 (563)
26 3gqw_A Fatty acid AMP ligase; 100.0 4.2E-55 1.4E-59 459.1 34.0 388 34-500 12-446 (576)
27 3kxw_A Saframycin MX1 syntheta 100.0 1.3E-55 4.4E-60 464.1 29.6 385 40-500 8-443 (590)
28 3ite_A SIDN siderophore synthe 100.0 1E-54 3.5E-59 454.2 31.2 384 40-500 17-411 (562)
29 3ipl_A 2-succinylbenzoate--COA 100.0 1.3E-54 4.4E-59 447.2 27.7 377 44-500 2-382 (501)
30 3nyq_A Malonyl-COA ligase; A/B 100.0 6.9E-55 2.4E-59 448.8 25.2 366 40-500 19-389 (505)
31 2vsq_A Surfactin synthetase su 100.0 1.3E-51 4.4E-56 467.7 39.6 368 42-500 463-845 (1304)
32 4gs5_A Acyl-COA synthetase (AM 100.0 9.1E-32 3.1E-36 263.7 10.6 200 219-500 36-235 (358)
33 3qov_A Phenylacetate-coenzyme 100.0 2.5E-30 8.5E-35 261.2 18.6 223 216-500 81-306 (436)
34 3hgu_A EHPF; phenazine, antibi 100.0 2.9E-30 9.8E-35 254.9 17.5 227 217-499 88-350 (369)
35 2y27_A Phenylacetate-coenzyme 100.0 9.5E-30 3.3E-34 257.0 20.9 237 200-500 72-311 (437)
36 2y4o_A Phenylacetate-coenzyme 100.0 1.5E-29 5E-34 256.1 20.2 238 199-500 73-313 (443)
37 3qov_A Phenylacetate-coenzyme 91.3 1.1 3.9E-05 43.9 10.9 107 76-183 104-217 (436)
38 2y4o_A Phenylacetate-coenzyme 91.0 1.2 4.2E-05 43.7 10.8 125 56-183 90-223 (443)
39 4eql_A 4-substituted benzoates 90.7 3 0.0001 42.4 13.2 30 218-247 91-121 (581)
40 2y27_A Phenylacetate-coenzyme 90.5 1.1 3.8E-05 44.0 9.9 125 56-183 88-221 (437)
41 3ipl_A 2-succinylbenzoate--COA 87.0 9.1 0.00031 38.0 14.0 122 56-183 161-285 (501)
42 1mdb_A 2,3-dihydroxybenzoate-A 78.4 35 0.0012 34.1 14.4 122 56-183 180-309 (539)
43 2d1s_A Luciferase, luciferin 4 77.3 18 0.00063 36.3 11.9 122 58-183 192-320 (548)
44 3hgu_A EHPF; phenazine, antibi 73.4 7.6 0.00026 36.8 7.5 105 56-164 89-220 (369)
45 3kxw_A Saframycin MX1 syntheta 66.6 45 0.0015 33.6 12.0 123 56-183 165-300 (590)
46 4gs5_A Acyl-COA synthetase (AM 66.0 20 0.00067 33.8 8.5 121 55-183 34-159 (358)
47 3o83_A Peptide arylation enzym 65.2 59 0.002 32.5 12.4 122 56-183 189-318 (544)
48 3rix_A Luciferase, luciferin 4 64.7 28 0.00097 34.9 9.9 107 76-183 208-318 (550)
49 3fce_A D-alanine--poly(phospho 64.6 34 0.0012 33.9 10.4 123 56-183 142-272 (512)
50 3e7w_A D-alanine--poly(phospho 63.3 70 0.0024 31.5 12.5 123 56-183 141-271 (511)
51 3rg2_A Enterobactin synthase c 62.1 92 0.0032 31.6 13.4 121 57-183 183-313 (617)
52 1t5h_X 4-chlorobenzoyl COA lig 60.6 41 0.0014 33.2 10.1 122 56-183 151-283 (504)
53 3r44_A Fatty acyl COA syntheta 60.6 50 0.0017 32.7 10.8 120 57-183 169-295 (517)
54 3c5e_A Acyl-coenzyme A synthet 60.3 89 0.003 31.4 12.7 123 56-183 204-333 (570)
55 3tbh_A O-acetyl serine sulfhyd 59.9 45 0.0015 31.0 9.6 65 94-158 62-127 (334)
56 3ivr_A Putative long-chain-fat 59.0 1.4E+02 0.0046 29.4 13.7 119 56-181 158-281 (509)
57 1v25_A Long-chain-fatty-acid-C 58.6 67 0.0023 32.0 11.4 101 219-327 32-134 (541)
58 3vc3_A Beta-cyanoalnine syntha 58.5 51 0.0018 30.8 9.8 70 89-158 73-142 (344)
59 3g7s_A Long-chain-fatty-acid-- 57.9 70 0.0024 31.9 11.4 106 219-328 33-140 (549)
60 4dg8_A PA1221; ANL superfamily 57.2 29 0.00098 35.6 8.4 123 56-184 162-288 (620)
61 3ni2_A 4-coumarate:COA ligase; 57.1 50 0.0017 32.9 10.2 102 218-329 35-138 (536)
62 4gr5_A Non-ribosomal peptide s 57.0 23 0.00079 35.8 7.7 123 56-184 212-338 (570)
63 3t5a_A Long-chain-fatty-acid-- 52.7 1.1E+02 0.0037 29.7 11.7 106 219-328 38-148 (480)
64 1amu_A GRSA, gramicidin synthe 49.4 97 0.0033 31.1 10.9 95 219-325 53-149 (563)
65 4eez_A Alcohol dehydrogenase 1 48.8 78 0.0027 29.3 9.5 77 77-156 136-215 (348)
66 1ry2_A Acetyl-coenzyme A synth 48.2 1E+02 0.0035 31.7 11.0 100 218-322 95-196 (663)
67 3etc_A AMP-binding protein; ad 47.8 96 0.0033 31.2 10.6 123 56-183 223-352 (580)
68 3ezx_A MMCP 1, monomethylamine 45.7 81 0.0028 27.1 8.2 77 277-403 105-195 (215)
69 3ist_A Glutamate racemase; str 44.5 68 0.0023 28.8 7.8 78 47-131 19-96 (269)
70 1pg4_A Acetyl-COA synthetase; 43.1 1.2E+02 0.0042 31.0 10.6 123 57-183 255-389 (652)
71 3ju7_A Putative PLP-dependent 41.2 75 0.0026 29.9 8.1 60 93-155 69-135 (377)
72 4b2g_A GH3-1 auxin conjugating 40.1 7.6 0.00026 39.6 0.7 30 218-247 97-127 (609)
73 2v7b_A Benzoate-coenzyme A lig 39.2 87 0.003 31.0 8.5 98 219-328 37-136 (529)
74 3gqw_A Fatty acid AMP ligase; 39.1 1.2E+02 0.004 30.3 9.6 122 57-183 175-310 (576)
75 3two_A Mannitol dehydrogenase; 38.6 98 0.0034 28.7 8.3 74 77-154 149-225 (348)
76 3ijw_A Aminoglycoside N3-acety 37.9 50 0.0017 29.6 5.7 25 88-112 18-42 (268)
77 3tsy_A Fusion protein 4-coumar 37.1 69 0.0024 34.8 7.9 100 218-327 74-175 (979)
78 2q3b_A Cysteine synthase A; py 37.0 1.9E+02 0.0063 26.3 9.8 64 94-158 58-122 (313)
79 4fuq_A Malonyl COA synthetase; 36.8 87 0.003 30.8 8.0 85 239-326 28-114 (503)
80 3nyq_A Malonyl-COA ligase; A/B 36.5 2.7E+02 0.0092 27.2 11.6 103 56-165 153-259 (505)
81 1h2b_A Alcohol dehydrogenase; 36.5 1.1E+02 0.0038 28.5 8.4 78 77-157 154-239 (359)
82 3s2e_A Zinc-containing alcohol 36.1 1.2E+02 0.0042 27.8 8.6 77 77-157 139-218 (340)
83 3tqh_A Quinone oxidoreductase; 35.2 1.4E+02 0.0047 27.3 8.7 75 77-156 125-203 (321)
84 3jv7_A ADH-A; dehydrogenase, n 34.3 1.3E+02 0.0045 27.7 8.5 78 78-158 143-225 (345)
85 2egu_A Cysteine synthase; O-ac 34.2 2E+02 0.0069 26.0 9.6 63 95-158 57-120 (308)
86 4epl_A Jasmonic acid-amido syn 33.5 11 0.00038 38.1 0.7 30 218-247 96-126 (581)
87 3l8c_A D-alanine--poly(phospho 33.4 3.5E+02 0.012 26.4 12.4 124 57-183 144-275 (521)
88 2nyg_A YOKD protein; PFAM02522 33.0 69 0.0024 28.8 5.8 24 89-112 17-40 (273)
89 4aec_A Cysteine synthase, mito 32.9 2.2E+02 0.0074 27.5 9.7 63 95-157 166-229 (430)
90 1o69_A Aminotransferase; struc 32.7 1.9E+02 0.0063 27.1 9.4 61 94-157 64-130 (394)
91 3ri6_A O-acetylhomoserine sulf 32.7 1.5E+02 0.005 28.6 8.7 62 106-167 100-164 (430)
92 3uhf_A Glutamate racemase; str 32.4 93 0.0032 28.0 6.6 63 47-116 38-100 (274)
93 3ite_A SIDN siderophore synthe 32.3 1.4E+02 0.0048 29.7 8.8 107 76-183 193-305 (562)
94 4h1h_A LMO1638 protein; MCCF-l 31.7 80 0.0027 29.2 6.3 61 98-158 8-87 (327)
95 1zsy_A Mitochondrial 2-enoyl t 31.6 1.5E+02 0.0052 27.5 8.4 79 77-156 139-223 (357)
96 1z7w_A Cysteine synthase; tran 31.6 2.6E+02 0.0089 25.5 9.9 64 95-158 58-122 (322)
97 1ve1_A O-acetylserine sulfhydr 31.2 2.9E+02 0.01 24.8 10.3 63 95-158 52-117 (304)
98 3out_A Glutamate racemase; str 30.3 1.8E+02 0.0062 25.9 8.2 62 47-115 21-82 (268)
99 3fpc_A NADP-dependent alcohol 30.2 1.1E+02 0.0038 28.4 7.2 75 77-155 139-217 (352)
100 2v03_A Cysteine synthase B; py 30.1 3.1E+02 0.01 24.7 10.2 63 95-158 53-116 (303)
101 3sr3_A Microcin immunity prote 29.6 91 0.0031 29.0 6.3 61 98-158 9-88 (336)
102 2cf5_A Atccad5, CAD, cinnamyl 29.5 1.4E+02 0.0049 27.7 7.9 77 77-156 152-232 (357)
103 2gzm_A Glutamate racemase; enz 29.5 2E+02 0.0067 25.5 8.4 78 47-131 17-94 (267)
104 2vsq_A Surfactin synthetase su 29.3 62 0.0021 36.5 6.0 122 56-183 605-731 (1304)
105 3dwg_A Cysteine synthase B; su 28.7 3.1E+02 0.01 25.1 9.8 63 95-158 65-128 (325)
106 2e7j_A SEP-tRNA:Cys-tRNA synth 28.5 2.7E+02 0.0091 25.4 9.7 56 99-157 90-155 (371)
107 1uuf_A YAHK, zinc-type alcohol 28.2 1.6E+02 0.0053 27.6 7.8 74 78-155 168-244 (369)
108 1eg5_A Aminotransferase; PLP-d 27.6 1.9E+02 0.0066 26.5 8.5 56 100-156 87-146 (384)
109 4a2c_A Galactitol-1-phosphate 27.5 3.2E+02 0.011 24.9 10.0 64 92-158 151-214 (346)
110 3dzz_A Putative pyridoxal 5'-p 27.4 1.8E+02 0.0061 27.0 8.2 56 99-157 106-168 (391)
111 3goh_A Alcohol dehydrogenase, 27.2 1.4E+02 0.0048 27.1 7.2 73 77-154 115-190 (315)
112 1yqd_A Sinapyl alcohol dehydro 27.2 2.4E+02 0.0081 26.2 9.0 61 92-155 177-238 (366)
113 4ej6_A Putative zinc-binding d 27.0 2.1E+02 0.0073 26.6 8.6 59 93-155 174-233 (370)
114 1zuw_A Glutamate racemase 1; ( 26.6 2.4E+02 0.0083 25.0 8.4 62 47-115 17-79 (272)
115 2pqm_A Cysteine synthase; OASS 26.5 3.6E+02 0.012 24.8 10.0 59 99-158 75-133 (343)
116 3a2b_A Serine palmitoyltransfe 26.2 3.6E+02 0.012 25.0 10.2 55 99-157 124-181 (398)
117 3tla_A MCCF; serine protease, 26.0 1.7E+02 0.0059 27.5 7.6 61 98-158 39-118 (371)
118 4e5s_A MCCFLIKE protein (BA_56 25.6 1.8E+02 0.0062 26.8 7.5 61 98-158 8-87 (331)
119 3isl_A Purine catabolism prote 25.2 2.5E+02 0.0086 26.1 9.0 58 99-157 83-144 (416)
120 2jtq_A Phage shock protein E; 25.1 1.4E+02 0.0047 20.7 5.3 46 76-128 22-67 (85)
121 1pl8_A Human sorbitol dehydrog 25.1 1.7E+02 0.0057 27.2 7.4 74 77-155 145-222 (356)
122 1mdo_A ARNB aminotransferase; 25.0 1.8E+02 0.006 27.1 7.7 55 97-155 74-133 (393)
123 3krt_A Crotonyl COA reductase; 24.7 2.5E+02 0.0084 27.1 8.8 77 77-157 198-281 (456)
124 1gu7_A Enoyl-[acyl-carrier-pro 24.5 2E+02 0.0068 26.6 7.9 79 77-156 138-223 (364)
125 3ndn_A O-succinylhomoserine su 23.8 2.8E+02 0.0095 26.3 8.9 14 234-247 235-248 (414)
126 2jfq_A Glutamate racemase; cel 23.7 2.9E+02 0.0099 24.7 8.4 83 41-131 31-113 (286)
127 2ch1_A 3-hydroxykynurenine tra 23.7 2.9E+02 0.0098 25.5 9.0 57 99-156 90-150 (396)
128 2jfz_A Glutamate racemase; cel 23.6 98 0.0034 27.3 5.1 61 47-114 14-74 (255)
129 3b8x_A WBDK, pyridoxamine 5-ph 23.5 2.8E+02 0.0096 25.7 8.8 55 98-156 76-135 (390)
130 3sma_A FRBF; N-acetyl transfer 23.1 50 0.0017 29.9 3.0 28 77-111 21-48 (286)
131 1y80_A Predicted cobalamin bin 23.0 3.1E+02 0.011 23.0 8.2 82 77-158 56-148 (210)
132 1kol_A Formaldehyde dehydrogen 22.7 2.2E+02 0.0074 26.8 7.8 55 93-151 177-232 (398)
133 3l6b_A Serine racemase; pyrido 22.4 1.7E+02 0.0059 27.1 6.8 58 101-159 75-132 (346)
134 2vvt_A Glutamate racemase; iso 22.4 3.3E+02 0.011 24.4 8.6 79 46-131 37-115 (290)
135 4b7c_A Probable oxidoreductase 22.3 3.4E+02 0.012 24.6 9.0 60 93-155 140-201 (336)
136 1piw_A Hypothetical zinc-type 22.2 2.5E+02 0.0087 25.9 8.1 76 77-156 152-230 (360)
137 1rjw_A ADH-HT, alcohol dehydro 22.1 2.6E+02 0.009 25.5 8.1 74 77-154 137-213 (339)
138 1y81_A Conserved hypothetical 21.9 2E+02 0.0068 22.5 6.2 57 102-161 70-126 (138)
139 3pc3_A CG1753, isoform A; CBS, 21.7 4.6E+02 0.016 25.8 10.3 61 96-157 106-167 (527)
140 3kki_A CAI-1 autoinducer synth 21.5 2.2E+02 0.0076 26.6 7.7 55 99-157 140-194 (409)
141 3ip1_A Alcohol dehydrogenase, 21.4 3.2E+02 0.011 25.7 8.8 54 98-155 210-264 (404)
142 2h6e_A ADH-4, D-arabinose 1-de 21.3 2.2E+02 0.0076 26.1 7.4 53 98-154 168-221 (344)
143 1e3j_A NADP(H)-dependent ketos 20.9 2.3E+02 0.0079 26.1 7.5 74 77-155 142-218 (352)
144 3qwb_A Probable quinone oxidor 20.8 4.7E+02 0.016 23.6 10.3 59 94-156 140-200 (334)
145 1p0f_A NADP-dependent alcohol 20.8 2.8E+02 0.0095 25.8 8.1 56 96-155 186-242 (373)
146 2oho_A Glutamate racemase; iso 20.7 3E+02 0.01 24.4 7.8 79 46-131 25-103 (273)
147 3a2k_A TRNA(Ile)-lysidine synt 20.7 4.6E+02 0.016 25.3 9.8 70 89-158 4-87 (464)
148 2z9v_A Aspartate aminotransfer 20.6 2.9E+02 0.0099 25.5 8.2 58 99-157 80-142 (392)
149 3uko_A Alcohol dehydrogenase c 20.6 3E+02 0.01 25.6 8.3 76 77-156 165-245 (378)
150 1jvb_A NAD(H)-dependent alcoho 20.4 3.4E+02 0.012 24.8 8.6 75 78-155 144-222 (347)
151 2dph_A Formaldehyde dismutase; 20.4 2.9E+02 0.0099 26.0 8.2 55 93-151 177-232 (398)
152 3i16_A Aluminum resistance pro 20.1 2E+02 0.007 27.6 7.0 59 99-157 112-184 (427)
153 4h27_A L-serine dehydratase/L- 20.1 1.9E+02 0.0064 27.1 6.6 54 106-159 96-149 (364)
154 2ayi_A Aminopeptidase T; metal 20.1 2.3E+02 0.0079 27.1 7.2 51 83-133 4-58 (408)
155 1y7l_A O-acetylserine sulfhydr 20.1 4.8E+02 0.016 23.5 9.4 63 95-158 54-117 (316)
No 1
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=4.6e-60 Score=491.38 Aligned_cols=407 Identities=21% Similarity=0.290 Sum_probs=331.3
Q ss_pred CCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCC
Q 010774 21 SGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVN 100 (501)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~ 100 (501)
.+..++++..++..++. ..++.++|.++++++|+++|+++. ++. +.+||+||.++++++|++|++.|++
T Consensus 4 ~~~~i~~~~~~~~~~p~----~~~l~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~ 72 (536)
T 3ni2_A 4 QEEFIFRSKLPDIYIPK----NLPLHSYVLENLSNHSSKPCLING---ANG----DVYTYADVELTARRVASGLNKIGIQ 72 (536)
T ss_dssp -CCCCBCCSSCCCCCCS----SCCHHHHHTTTGGGSTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHTTCC
T ss_pred ccceEEecCCCCCCCCC----CCcHHHHHHHHhhcCCCceEEEEC---CCC----CEEEHHHHHHHHHHHHHHHHHcCCC
Confidence 44567777666544332 478999999999999999999875 322 5899999999999999999999999
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEe
Q 010774 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSF 180 (501)
Q Consensus 101 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~ 180 (501)
+||+|+++++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++......+....... .. .++.+
T Consensus 73 ~gd~V~i~~~~~~~~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~--~~-~~~~~ 149 (536)
T 3ni2_A 73 QGDVIMLFLPSSPEFVLAFLGASHRGAIITAANPFSTPAELAKHAKASRAKLLITQACYYEKVKDFARES--DV-KVMCV 149 (536)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHHHHHH--TC-EEEES
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHHhCCEEeccCCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHHHhhc--Cc-eEEEe
Confidence 9999999999999999999999999999999999999999999999999999999987766554433221 11 34444
Q ss_pred cCCChhhHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeecc
Q 010774 181 ANVSSSQKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTG 260 (501)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~ 260 (501)
+.... ....++++........+.....++++++|+|||||||.||||+++|+++++.+....... ...
T Consensus 150 ~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~-~~~ 217 (536)
T 3ni2_A 150 DSAPD-----------GCLHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGD-NPN 217 (536)
T ss_dssp SCCCT-----------TCEETHHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSS-SCS
T ss_pred cCCCC-----------CccCHHHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhc-ccc
Confidence 33211 134566666544333334456789999999999999999999999999998876543321 111
Q ss_pred ccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCC
Q 010774 261 KVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGG 338 (501)
Q Consensus 261 ~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~ 338 (501)
..+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+++.
T Consensus 218 ~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------- 288 (536)
T 3ni2_A 218 LYFHSEDVILCVLPMFHIYALNSIMLCGLRVGAPILIMPKFEIGSLLGLIEKYKVSIAPVVPPVMMSIAKS--------- 288 (536)
T ss_dssp SCCCTTCCEEECSCTTSHHHHHHTHHHHHHHTCCEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTC---------
T ss_pred ccCCCCCEEEEecChHHHHHHHHHHHHHHhcCCEEEEcCCCCHHHHHHHHHHhCCeEEEccHHHHHHHHhC---------
Confidence 25778999999999999999975 7889999999999875 999999999999999999999999998752
Q ss_pred hhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecc
Q 010774 339 ALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGL 417 (501)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~ 417 (501)
+.....++ ++||.+++||+++++++.+++++.+ ++.+++.||+
T Consensus 289 ----------------------------~~~~~~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~l~~~YG~ 332 (536)
T 3ni2_A 289 ----------------------------PDLDKHDL--------SSLRMIKSGGAPLGKELEDTVRAKFPQARLGQGYGM 332 (536)
T ss_dssp ----------------------------SCGGGSCC--------TTCCEEEEESSCCCHHHHHHHHHHCTTSEEEEEEEC
T ss_pred ----------------------------cccccCCC--------ccceEEEECCCCCCHHHHHHHHHHCCCCCccccccc
Confidence 11222222 3899999999999999999999998 8899999999
Q ss_pred cccCcceeccc----CCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-cc
Q 010774 418 TESCSGCFTSL----ADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD 492 (501)
Q Consensus 418 tE~~~~~~~~~----~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~d 492 (501)
||++.+++... ......++++|+|+++++++|+|.+++.+++.| +.|||+|+|++++.|||++|+.|++.| .+
T Consensus 333 TE~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~GEl~v~g~~v~~GY~~~p~~t~~~~~~~ 410 (536)
T 3ni2_A 333 TEAGPVLAMCLAFAKEPFDIKPGACGTVVRNAEMKIVDPETGASLPRN--QPGEICIRGDQIMKGYLNDPEATSRTIDKE 410 (536)
T ss_dssp GGGSSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTTCCBCCTT--CCEEEEEESTTSCSEETTCHHHHHHHBCTT
T ss_pred cccchhhhcccccCCccccCCCCCeeEeCCCcEEEEEeCCCCcCCCCC--CccEEEEeCcccchhhcCChhHHHhhccCC
Confidence 99997765432 122345689999999999999994457767665 999999999999999999999999999 79
Q ss_pred CcccCCCC
Q 010774 493 GWFHTEVH 500 (501)
Q Consensus 493 gw~~TGD~ 500 (501)
|||+|||.
T Consensus 411 g~~~TGDl 418 (536)
T 3ni2_A 411 GWLHTGDI 418 (536)
T ss_dssp SCEEEEEE
T ss_pred CceEcccE
Confidence 99999995
No 2
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=3.4e-59 Score=486.25 Aligned_cols=395 Identities=22% Similarity=0.279 Sum_probs=331.4
Q ss_pred CCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCC--CCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh
Q 010774 37 ESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGK--VGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 37 ~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~--~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 114 (501)
..+....++.++|.++++++|+++|+++. +.. .+..+++||+||.++++++|++|.+.|+++||+|+|+++|+++
T Consensus 13 ~~~~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~ 89 (549)
T 3g7s_A 13 SLYYPKISLADRIDAAAEKFGEKTAIISA---EPKFPSEFPESMNFLEICEVTKKLASGISRKGVRKGEHVGVCIPNSID 89 (549)
T ss_dssp CCCCCCCCTTHHHHHHHHHHTTSEEEEEE---SSCCCCSSCSEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHH
T ss_pred CCCcCCCCHHHHHHHHHHhCCCceEEEeC---CCcccccccceeeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHH
Confidence 34455689999999999999999999987 421 2334689999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 115 WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
+++++|||+++|++++|++|.++.+++.++++.++++++|++......+....... ....++..+..
T Consensus 90 ~~~~~lA~~~~G~~~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~----------- 156 (549)
T 3g7s_A 90 YVMTIYALWRVAATPVPINPMYKSFELEHILNDSEATTLVVHSMLYENFKPVLEKT--GVERVFVVGGE----------- 156 (549)
T ss_dssp HHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHHHHTTS--CCCEEEEETCS-----------
T ss_pred HHHHHHHHHHhCCEEEccCCCCCHHHHHHHHHhcCCCEEEEChHHHHHHHHHHhhC--CCcEEEEeCCC-----------
Confidence 99999999999999999999999999999999999999999988776654443322 24455555432
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCC-CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEec
Q 010774 195 GVSCFSWEEFLQLGTLDCELPPKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFL 273 (501)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 273 (501)
...+.++..............+ +++++|+|||||||.||||+++|.++.+.+..+...+ ++..+|++++.+
T Consensus 157 ---~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~ 228 (549)
T 3g7s_A 157 ---VNSLSEVMDSGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVAT-----GLSHMDTIVGCM 228 (549)
T ss_dssp ---SSCHHHHHHHSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHH-----CCCTTCEEECCS
T ss_pred ---CcCHHHHHhcCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHc-----CCCCCCEEEEeC
Confidence 2345666655432222333333 8999999999999999999999999999998877666 788999999999
Q ss_pred ChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q 010774 274 PLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (501)
Q Consensus 274 pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (501)
|++|.+++..++.++..|+++++.+. ++..+++.++++++|+++++|++++.+++........
T Consensus 229 p~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~---------------- 292 (549)
T 3g7s_A 229 PMFHSAEFGLVNLMVTVGNEYVVMGMFNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNKT---------------- 292 (549)
T ss_dssp CTTSHHHHHHHTTHHHHCCEEEEESSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCCC----------------
T ss_pred cHHHHHHHHHHHHHHhcCceEEEcCCCCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhccc----------------
Confidence 99999998888889999999998875 9999999999999999999999999998754322100
Q ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHh----hC---CCeeeeecccccCccee
Q 010774 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVT----SG---APLTQGYGLTESCSGCF 425 (501)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~----~~---~~l~~~yG~tE~~~~~~ 425 (501)
+++ +++|.+++||+++++++.+++.+. ++ +.+++.||+||++.+++
T Consensus 293 -------------------~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~ 345 (549)
T 3g7s_A 293 -------------------YDW--------SYLKVFATGAWPVAPALVEKLLKLAAEKCNNPRLRHNQIWGMTEACPMVT 345 (549)
T ss_dssp -------------------CCC--------TTCCEEEEESSCCCHHHHHHHHHHHHHHSSCTTCEEEEEEECGGGSSEEE
T ss_pred -------------------CCc--------cceeEEEeCCccCCHHHHHHHHHHHHhhcCCccccccceEeccccchhhh
Confidence 011 389999999999999999999987 56 88999999999998887
Q ss_pred cccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh---ccC--cccCCCC
Q 010774 426 TSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI---VDG--WFHTEVH 500 (501)
Q Consensus 426 ~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~---~dg--w~~TGD~ 500 (501)
..........+++|+|+++++++|+|.+++++++.| +.|||+|+|++++.|||++|+.|++.| .+| ||+|||.
T Consensus 346 ~~~~~~~~~~~~~G~p~~~~~~~i~d~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~g~~~~~TGDl 423 (549)
T 3g7s_A 346 TNPPLRLDKSTTQGVPMSDIELKVISLEDGRELGVG--ESGEIVIRGPNIFKGYWKREKENQECWWYDEKGRKFFRTGDV 423 (549)
T ss_dssp ECCGGGGGGTTSCCEECTTCEEEEECSSSCCEECTT--CCEEEEEESTTSCSEETTCTTGGGTSEEECTTCCEEEEEEEE
T ss_pred cCCccccCcCCCccccCCCCEEEEEeCCCCcCCCCC--CceEEEEECcchhhhhCCChhhhhhhhhccCCCCceEccCcE
Confidence 766555456689999999999999996777777766 999999999999999999999999988 678 9999995
No 3
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=9.5e-59 Score=481.82 Aligned_cols=389 Identities=23% Similarity=0.306 Sum_probs=320.5
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.++|.++++.+|+++|+++. ++ +..+++||+||.++++++|++|+++|+++||+|+++++|++++++++|
T Consensus 16 ~~~~l~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~l 90 (541)
T 1v25_A 16 EELNLWDFLERAAALFGRKEVVSRL---HT--GEVHRTTYAEVYQRARRLMGGLRALGVGVGDRVATLGFNHFRHLEAYF 90 (541)
T ss_dssp CCCCTHHHHHHHHHHSTTCEEEEEC---TT--SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCceEEEEe---cC--CCCceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 3468999999999999999999864 22 123689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|++|.++.+++.++|+.++++++|++.+....+..... ....+..++.++.... .....
T Consensus 91 A~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~~~~~ 159 (541)
T 1v25_A 91 AVPGMGAVLHTANPRLSPKEIAYILNHAEDKVLLFDPNLLPLVEAIRG-ELKTVQHFVVMDEKAP----------EGYLA 159 (541)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHGG-GCSSCCEEEESSSCCC----------TTCEE
T ss_pred HHHhcCcEEEecCcccCHHHHHHHHHhCCCcEEEEChhHHHHHHHHHh-hCCCccEEEEecCCCC----------ccccc
Confidence 999999999999999999999999999999999999876655433322 2234555666554321 01234
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhc--ceeeeeccccCCCCcEEEEecChHHH
Q 010774 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSV--DQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~--~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
+++++..... .....++++++|+|||||||.||||++||++++...... ...+ .+..+|++++.+|++|.
T Consensus 160 ~~~~~~~~~~---~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h~ 231 (541)
T 1v25_A 160 YEEALGEEAD---PVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGT-----ALSEKDVVLPVVPMFHV 231 (541)
T ss_dssp HHHHCCSCCC---CCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTT-----CCCTTCEEEECSCTTSH
T ss_pred HHHHhhccCC---cccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccc-----cCCCCCEEEEeccchhh
Confidence 5555433211 133457899999999999999999999999998776542 2223 67889999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 279 YDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
+++..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++.......
T Consensus 232 ~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~--------------------- 290 (541)
T 1v25_A 232 NAWCLPYAATLVGAKQVLPGPRLDPASLVELFDGEGVTFTAGVPTVWLALADYLESTGH--------------------- 290 (541)
T ss_dssp HHHTHHHHHHHHTCEEEECTTCCSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHTC---------------------
T ss_pred hHHHHHHHHHhcCceEEeeCCCCCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccCC---------------------
Confidence 998777889999999999863 999999999999999999999999999875432210
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-----
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV----- 431 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~----- 431 (501)
++ ++||.+++||+++++++.++| +.+|+++++.||+||++.+++......
T Consensus 291 ----------------~l--------~~lr~i~~gG~~l~~~~~~~~-~~~g~~~~~~YG~TE~~~~~~~~~~~~~~~~~ 345 (541)
T 1v25_A 291 ----------------RL--------KTLRRLVVGGSAAPRSLIARF-ERMGVEVRQGYGLTETSPVVVQNFVKSHLESL 345 (541)
T ss_dssp ----------------CC--------SSCCEEEECSSCCCHHHHHHH-HHTTCEEEEEEECGGGSSEEEECCCCGGGTTS
T ss_pred ----------------cc--------hhccEEEECCCCCCHHHHHHH-HHhCCceeecccccccccceeccccccccccc
Confidence 01 389999999999999999999 667999999999999998776553321
Q ss_pred -----CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 432 -----FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 432 -----~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
....+++|+|+|+++++|+| +++++++.+.+++|||+|+||+++.|||++|+.|++.| .||||+|||.
T Consensus 346 ~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~~~~~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~g~~~TGDl 419 (541)
T 1v25_A 346 SEEEKLTLKAKTGLPIPLVRLRVAD-EEGRPVPKDGKALGEVQLKGPWITGGYYGNEEATRSALTPDGFFRTGDI 419 (541)
T ss_dssp CHHHHHHHHTSCBEECTTCEEEEEC-TTSCBCCSSSCCCEEEEEESTTSBSSCBTCHHHHHTTBCTTSCEEEEEE
T ss_pred CccccccccCCCCCcCCCcEEEEEC-CCCCCCCCCCCcceEEEEeCcchhccccCChhhhhhhccCCCCeEcCCE
Confidence 12347899999999999999 88988876545799999999999999999999999999 5999999995
No 4
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=4.2e-59 Score=485.68 Aligned_cols=398 Identities=22% Similarity=0.333 Sum_probs=320.4
Q ss_pred CCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 39 PAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 39 ~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
+....|+.++|.++++++|+++|++... ++..+ +.+||+||.++++++|++|+++|+++||+|+|+++|+++++++
T Consensus 16 ~~~~~tl~~~l~~~a~~~p~~~a~~a~~--~~~~~--~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~ 91 (550)
T 3rix_A 16 PLEDGTAGEQLHKAMKRYALVPGTIAFT--DAHIE--VNITYAEYFEMSVRLAEAMKRYGLNTNHRIVVCSENSLQFFMP 91 (550)
T ss_dssp CCCCSCHHHHHHHHHHHHHTSTTCEEEE--ETTTC--CEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECSSCTTTHHH
T ss_pred CcccCCHHHHHHHHHHhCCCCceEEEee--ecCCC--cEeEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEcCCcccHHHH
Confidence 3455899999999999999999986320 11111 5899999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
+|||+++|++++|++|.++.+++.++++.++++++|++.+....+..... ....+..++.++..... ...
T Consensus 92 ~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~---------~~~ 161 (550)
T 3rix_A 92 VLGALFIGVAVAPANDIYNERELLNSMNISQPTVVFVSKKGLQKILNVQK-KLPIIQKIIIMDSKTDY---------QGF 161 (550)
T ss_dssp HHHHHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGHHHHHHHHH-HCTTCCEEEETTCSSCB---------TTB
T ss_pred HHHHHHcCCEEeecCCcCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHHh-hCCCcceEEEEcCCccc---------cCc
Confidence 99999999999999999999999999999999999999887766544332 22445666666543211 123
Q ss_pred eeHHHHHhcCCC------CC-CCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEE
Q 010774 199 FSWEEFLQLGTL------DC-ELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFS 271 (501)
Q Consensus 199 ~~~~~~~~~~~~------~~-~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~ 271 (501)
..+.+++..... .. +.....++++++|+|||||||.||||+++|+++...+......+ ....+..+|++++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~--~~~~~~~~~~~l~ 239 (550)
T 3rix_A 162 QSMYTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPI--FGNQIIPDTAILS 239 (550)
T ss_dssp CBHHHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTT--TSCCCCTTCEEEE
T ss_pred ccHHHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhh--ccccCCCCcEEEE
Confidence 455555543311 11 11222357899999999999999999999999998877654431 0125778999999
Q ss_pred ecChHHHHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHH
Q 010774 272 FLPLAHIYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (501)
Q Consensus 272 ~~pl~~~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
.+|++|.+++..++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++.
T Consensus 240 ~~p~~~~~g~~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------------------- 298 (550)
T 3rix_A 240 VVPFHHGFGMFTTLGYLICGFRVVLMYRFEEELFLRSLQDYKIQSALLVPTLFSFFAKS--------------------- 298 (550)
T ss_dssp CSCTTSHHHHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCSEEEECHHHHHHHHHC---------------------
T ss_pred echHHHHHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHcCCeEEEeCcHHHHHHHhC---------------------
Confidence 9999999999888889999999999875 999999999999999999999999998762
Q ss_pred HHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCC-eeeeecccccCcceecccC
Q 010774 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAP-LTQGYGLTESCSGCFTSLA 429 (501)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~-l~~~yG~tE~~~~~~~~~~ 429 (501)
......++ ++||.+++||+++++++.+++.+.++.. +++.||+||++++++....
T Consensus 299 ----------------~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~v~~~YG~TE~~~~~~~~~~ 354 (550)
T 3rix_A 299 ----------------TLIDKYDL--------SNLHEIASGGAPLSKEVGEAVAKRFHLPGIRQGYGLTETTSAILITPE 354 (550)
T ss_dssp ----------------CGGGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSCCEEEEECGGGSSEEEECCT
T ss_pred ----------------ccccccCc--------ccccEEEEecCCCCHHHHHHHHHHcCCCccccccCcCccccceecCCC
Confidence 22222223 3899999999999999999999999875 9999999999988776655
Q ss_pred CCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 430 DVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 430 ~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.. ...+++|+|+|+++++|+|.+++.+++.| +.|||||+|++++.|||++|+.|++.| .+|||+|||.
T Consensus 355 ~~-~~~~~vG~~~~~~~~~i~d~~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~~~~~g~~~TGDl 423 (550)
T 3rix_A 355 GD-DKPGAVGKVVPFFEAKVVDLDTGKTLGVN--QRGELCVRGPMIMSGYVNNPEATNALIDKDGWLHSGDI 423 (550)
T ss_dssp TC-CCTTEEEEECTTCEEEEECTTTCCBCCTT--CCEEEEEESTTSCSEETTCHHHHHHHBCTTSCEEEEEE
T ss_pred CC-CCCCCcccccCCcEEEEEeCCCCcCCCCC--CCeEEEEeCCCcchhhcCChhhhhhhcCCCCCeecCcE
Confidence 43 44589999999999999995556666655 999999999999999999999999999 8999999995
No 5
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=8.3e-59 Score=482.60 Aligned_cols=385 Identities=15% Similarity=0.169 Sum_probs=320.5
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..|+.++|.++++++|+++|+++. + +++||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 29 ~~tl~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~lA 99 (544)
T 3o83_A 29 DQPLTRILTVGVQSHPHSLAIICG----E-----RQLSYIELDRLSTNLATRLAEKGLGKGDTALVQLPNVAEFYIVFFA 99 (544)
T ss_dssp CCCTTHHHHHHHHHCTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCceEEEcC----C-----CceeHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHH
Confidence 478999999999999999999874 3 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
|+++|++++|+++.++.+++.++++.++++++|++..... ...............++.+.....
T Consensus 100 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 167 (544)
T 3o83_A 100 LLKAGVVVLNALYSHRQYELNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVNLSPEIILMLNHQAT------------ 167 (544)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTTCCCSEEEEETCCTT------------
T ss_pred HHHhCcEEecCCCCCCHHHHHHHHHhcCeeEEEEccccccccHHHHHHHHhhcccCcceEEEecCCcc------------
Confidence 9999999999999999999999999999999999986541 111222222234445555543321
Q ss_pred EeeHHHHHhcCC-CCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 198 CFSWEEFLQLGT-LDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 198 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
...+.++..... .........++++++|+|||||||.||||+++|+++.+.+......+ ++..+|++++.+|++
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 242 (544)
T 3o83_A 168 DFGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEIC-----GLNSNTRLLCALPAP 242 (544)
T ss_dssp SEEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTT
T ss_pred ccchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHh-----CCCCCCeEEEecCcc
Confidence 123444444332 22222445678999999999999999999999999999998877766 788999999999999
Q ss_pred HHHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHh
Q 010774 277 HIYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKL 353 (501)
Q Consensus 277 ~~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 353 (501)
|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+++..
T Consensus 243 h~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~----------------------- 299 (544)
T 3o83_A 243 HNFMLSSPGALGVLHAGGCVVMAPNPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKA----------------------- 299 (544)
T ss_dssp SHHHHHSSHHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHH-----------------------
T ss_pred eEeecchHHHHHHHHcCCEEEECCCCCHHHHHHHHHHHCCCEEEechHHHHHHHhch-----------------------
Confidence 9999874 7889999999999875 9999999999999999999999999988632
Q ss_pred hhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCc
Q 010774 354 GNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFN 433 (501)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~ 433 (501)
.....++ ++||.+++||+++++++.+++.+.+++.+++.||+||++..++........
T Consensus 300 --------------~~~~~~~--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~ 357 (544)
T 3o83_A 300 --------------AQYKDQI--------QSLKLLQVGGASFPESLARQVPEVLNCKLQQVFGMAEGLVNYTRLDDSDEQ 357 (544)
T ss_dssp --------------TTTHHHH--------TTCCEEEEESSCCCHHHHTHHHHHHCSEEEEEEECTTSCEEECCTTSCHHH
T ss_pred --------------hhccccC--------CcceEEEEcCCCCCHHHHHHHHHHhCCcEEeeeccccccceeecCCCchhh
Confidence 1122333 389999999999999999999999999999999999988655443333233
Q ss_pred ccCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 434 MIGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
..+++|+|+ ++++++|+| +++++++.| ++|||+|+|++++.|||++|+.|++.| .+|||+|||.
T Consensus 358 ~~~~~G~p~~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl 423 (544)
T 3o83_A 358 IFTTQGRPISSDDEIKIVD-EQYREVPEG--EIGMLATRGPYTFCGYYQSPEHNSQVFDEDNYYYSGDL 423 (544)
T ss_dssp HHHCCCEESCTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTSCSCCTTCHHHHHHHBCTTCCEEEEEE
T ss_pred ccCCCceecCCCcEEEEEC-CCCCCCCCC--CeeEEEEecCCcchhhcCChhhhhhhCCCCCCeEcCCE
Confidence 457899996 899999999 999888776 999999999999999999999999999 7999999995
No 6
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=1.7e-58 Score=482.89 Aligned_cols=391 Identities=17% Similarity=0.183 Sum_probs=322.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
..++...++|+++++.+|+++|+++. +.. +..+.+||+||.++++++|++|+++|+++||+|+|+++|++++++++
T Consensus 53 ~~~n~~~~~l~~~a~~~pd~~Al~~~---~~~-g~~~~~Ty~eL~~~~~~~A~~L~~~Gv~~Gd~V~l~~~~~~e~~~~~ 128 (580)
T 3etc_A 53 ENFNFAYDVVDVYARDSPEKLAMIWC---DDY-GNEKIFTFKDLKYYSDKAANFFVKHGIGKGDYVMLTLKSRYDFWYCM 128 (580)
T ss_dssp SSCCHHHHTHHHHHHHCTTCEEEEEE---ESS-SCEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECTTCTHHHHHH
T ss_pred ccchHHHHHHHHHHhhCCCCEEEEEE---cCC-CCEeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHH
Confidence 34455669999999999999999986 332 33478999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCCh--hhhhhcCccCCCCc-cEEEEecCCChhhHHHhhhcCc
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKI--PSILSCLPRCCLYL-KTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
|||+++|++++|++|.++.+++.++++.++++++|++.+.. ..+...... +..+ ..++.++.... .
T Consensus 129 lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----------~ 197 (580)
T 3etc_A 129 LGLHKLGAIAVPATHMLKTRDIVYRIEKAGLKMIVCIAEDDVPEQVDEAHAE-CGDIPLKKAKVGGDVL----------E 197 (580)
T ss_dssp HHHHHHTCEEEECCTTCCHHHHHHHHHHHTCCEEEEESSTTHHHHHHHHHHH-HCSCCCEEEEESSSCC----------T
T ss_pred HHHHhCCEEEEeCCccCCHHHHHHHHHhcCCCEEEEecchhHHHHHHHHhhh-CCCcceEEEEeCCccc----------c
Confidence 99999999999999999999999999999999999988764 333322221 1222 34445543211 1
Q ss_pred eEeeHHHHHhcCCCCCC-C---CCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEe
Q 010774 197 SCFSWEEFLQLGTLDCE-L---PPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSF 272 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (501)
.+..+.+.+........ + ....++++++|+|||||||.||+|.++|.+++..+......+ .+..++++++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 272 (580)
T 3etc_A 198 GWIDFRKELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQ-----NVEDDGLHYTV 272 (580)
T ss_dssp TCEEHHHHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTS-----CCCTTCEEEEC
T ss_pred ccccHHHHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhh-----CCCCCceEEEe
Confidence 24567776655422221 1 245679999999999999999999999999888776644433 67889999999
Q ss_pred cChHHHHHHHH-HHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 273 LPLAHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 273 ~pl~~~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
.|++|..++.. ++.++..|+++++.+ +++..+++.++++++|+++++|++++.+++.
T Consensus 273 ~~~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------------------- 333 (580)
T 3etc_A 273 ADSGWGKCVWGKLYGQWIAGCAVFVYDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKE------------------- 333 (580)
T ss_dssp CCTTSTHHHHHTTHHHHHTTCEEEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTS-------------------
T ss_pred CChHHHHHHHHHHHHHHhCCcEEEEecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhc-------------------
Confidence 99999888775 788999999998873 3999999999999999999999999988741
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceeccc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSL 428 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 428 (501)
.....++ ++||.+++||+++++++.++|.+.+|+++++.||+||++.+++..+
T Consensus 334 -------------------~~~~~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~ 386 (580)
T 3etc_A 334 -------------------DLSHYNF--------STLKYAVVAGEPLNPEVFNRFLEFTGIKLMEGFGQTETVVTIATFP 386 (580)
T ss_dssp -------------------CC---CC--------TTCCEEEECSSCCCHHHHHHHHHHHSCCCEEEECCTTSSCCEECCT
T ss_pred -------------------ccccCCC--------ccceEEEEccCCCCHHHHHHHHHHhCCeEecccccccccceeecCC
Confidence 1122223 3899999999999999999999999999999999999987666544
Q ss_pred CCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec-----CCccccccCCcccchhhhccCcccCCCC
Q 010774 429 ADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG-----NTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 429 ~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g-----~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.. ...++++|+|+||++++|+| +++++++.| +.|||+|+| ++++.|||++|+.|++.|.||||+|||.
T Consensus 387 ~~-~~~~~~~G~p~~~~~v~ivd-~~g~~~~~g--~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~~gwy~TGDl 459 (580)
T 3etc_A 387 WM-EPKPGSIGKPTPGYKIELMD-RDGRLCEVG--EEGEIVINTMEGKPVGLFVHYGKDPERTEETWHDGYYHTGDM 459 (580)
T ss_dssp TS-CCCTTCCBEECTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTCCCTTCCCEETTCHHHHHHHEETTEEEEEEE
T ss_pred CC-CCCCCccccCCCCCEEEEEC-CCCCCCCCC--CceEEEEecCCCCCCeeeccccCCHhHHHhhcCCCEEecCcE
Confidence 33 34568999999999999999 999888776 899999997 7899999999999999999999999995
No 7
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=9.3e-59 Score=479.26 Aligned_cols=383 Identities=21% Similarity=0.288 Sum_probs=315.6
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
+...|+.++|.++++.+|+++|+++. +.. +++||+||.++++++|++|.++|+++||+|+++++|++++++++
T Consensus 13 ~~~~~l~~~l~~~a~~~p~~~A~~~~---~~~----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~ 85 (517)
T 3r44_A 13 DKMKNIGWMLRQRATVSPRLQAYVEP---STD----VRMTYAQMNALANRCADVLTALGIAKGDRVALLMPNSVEFCCLF 85 (517)
T ss_dssp GGGGCHHHHHHHHHHHSTTSEEEEEG---GGT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred ccccCHHHHHHHHHHhCCCCeEEEeC---CcC----ceeeHHHHHHHHHHHHHHHHHcCCCCcCEEEEEcCCCHHHHHHH
Confidence 34578999999999999999999875 322 58999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++|++|.++.+++.++++.++++++|++......+....... .....++.+.. ..
T Consensus 86 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~---------------~~ 149 (517)
T 3r44_A 86 YGAAKLGAVAVPINTRLAAPEVSFILSDSGSKVVIYGAPSAPVIDAIRAQA-DPPGTVTDWIG---------------AD 149 (517)
T ss_dssp HHHHHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHHHHHHSS-SCCTTCCEEEE---------------HH
T ss_pred HHHHHhCcEEEecCcccCHHHHHHHHHhcCceEEEECCchHHHHHHHHhcc-CCccEEEEccC---------------cc
Confidence 999999999999999999999999999999999999987665543322211 11111111110 01
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
.+.+.+.......+.....++++++|+|||||||.||||+++|+++.+.+......+ ++..+|++++.+|++|.+
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~ 224 (517)
T 3r44_A 150 SLAERLRSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTI-----DVRYRDRLLLPLPMFHVA 224 (517)
T ss_dssp HHHHHHHHCCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHS-----CCCTTCEEEECSCTTSHH
T ss_pred cHHHHhhccCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhc-----CCCCCCEEEEeCchHHHH
Confidence 233444333333334455789999999999999999999999999999998877666 788999999999999999
Q ss_pred HHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 280 DQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
++...+.+++.|+++++.+. ++..+++.++++++|+++++|++++.+.+..
T Consensus 225 ~~~~~~~~~~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------------------------- 276 (517)
T 3r44_A 225 ALTTVIFSAMRGVTLISMPQFDATKVWSLIVEERVCIGGAVPAILNFMRQVP---------------------------- 276 (517)
T ss_dssp HHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSH----------------------------
T ss_pred HHHHHHHHHhcCeEEEEeCCCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCc----------------------------
Confidence 99875555559999998875 9999999999999999999999999987622
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC-CcccCc
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV-FNMIGT 437 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~-~~~~~s 437 (501)
.....++ ++||.+++||+++++++.+.+.+. ++.+++.||+||++++++...... ....++
T Consensus 277 ---------~~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~-~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~ 338 (517)
T 3r44_A 277 ---------EFAELDA--------PDFRYFITGGAPMPEALIKIYAAK-NIEVVQGYALTESCGGGTLLLSEDALRKAGS 338 (517)
T ss_dssp ---------HHHHCCC--------TTCCEEEECSSCCCHHHHHHHHHT-TCEEEEEEECGGGTTCEEEECGGGTTTTTTC
T ss_pred ---------ccccCCC--------CcccEEEECCCCCCHHHHHHHHhc-CCcEEEeecccccccceeecCCccccccCCC
Confidence 1222222 389999999999999999999987 999999999999988766554433 455689
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+|+++++++|+| +++..++.+ .|||+|+|++++.|||++|+.|++.|.+|||+|||.
T Consensus 339 ~G~~~~~~~~~i~d-~~~~~~~~g---~GEl~v~g~~v~~GY~~~p~~t~~~f~~g~~~TGDl 397 (517)
T 3r44_A 339 AGRATMFTDVAVRG-DDGVIREHG---EGEVVIKSDILLKEYWNRPEATRDAFDNGWFRTGDI 397 (517)
T ss_dssp CBEECTTEEEEEEC-TTSCEESSE---EEEEEEEETTSCSEETTCHHHHHHTEETTEEEEEEE
T ss_pred CCcCCCCeEEEEEC-CCCCCCCCC---CeEEEEeCcchhhhhCCChhhhHhhhcCCCEeccee
Confidence 99999999999999 888766654 799999999999999999999999999999999995
No 8
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=9.4e-59 Score=481.66 Aligned_cols=382 Identities=18% Similarity=0.189 Sum_probs=311.6
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|+++++++|+++|+++. + +.+||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 24 ~~tl~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 94 (539)
T 1mdb_A 24 GETFGDLLRDRAAKYGDRIAITCG---N------THWSYRELDTRADRLAAGFQKLGIQQKDRVVVQLPNIKEFFEVIFA 94 (539)
T ss_dssp SCCHHHHHHHHHHHHTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHCCCCEEEEeC---C------CcccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHHH
Confidence 368999999999999999999864 2 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
|+++|++++|++|.++.+++.++++.++++++|++..... ............++.++..+....
T Consensus 95 ~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 162 (539)
T 1mdb_A 95 LFRLGALPVFALPSHRSSEITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQSKLPTLKNIIVAGEAEE------------ 162 (539)
T ss_dssp HHHHTCEEEECCTTCCHHHHHHHHHHTTCSEEEEESEETTEEHHHHHHHHHHHCTTCCCEEEESCCTT------------
T ss_pred HHHcCeEEecCCCCCCHHHHHHHHHhCCCCEEEeccccccccHHHHHHHHHhcCCCccEEEEcCCccc------------
Confidence 9999999999999999999999999999999999875321 111111111223344444332110
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHH
Q 010774 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
+.++..............++++++|+|||||||.||||+++|+++++.+......+ .+..+|++++.+|++|
T Consensus 163 ---~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~h 234 (539)
T 1mdb_A 163 ---FLPLEDLHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVC-----WLDHSTVYLAALPMAH 234 (539)
T ss_dssp ---SEEGGGCCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSCTTS
T ss_pred ---hhhhhhccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCCEEEEeecccc
Confidence 11111111111122345678999999999999999999999999999988776665 7789999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+++......
T Consensus 235 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-------------------- 294 (539)
T 1mdb_A 235 NYPLSSPGVLGVLYAGGRVVLSPSPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRR-------------------- 294 (539)
T ss_dssp HHHHHSSHHHHHHHTTCEEEECSSSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCC--------------------
T ss_pred cchhhHHHHHHHHHhCCEEEECCCCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccC--------------------
Confidence 999874 7889999999999875 99999999999999999999999999886432210
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 434 (501)
.++ ++||.+++||+++++++.++|++.+|+.+++.||+||++..++.........
T Consensus 295 -----------------~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~ 349 (539)
T 1mdb_A 295 -----------------DDL--------SSLQVLQVGGAKFSAEAARRVKAVFGCTLQQVFGMAEGLVNYTRLDDPEEII 349 (539)
T ss_dssp -----------------CCC--------TTCCEEEEESSCCCHHHHTTHHHHTCSEEEEEEECTTSCEEECCTTSCHHHH
T ss_pred -----------------CCc--------cceeEEEEcCCCCCHHHHHHHHHHhCCcEEEEEcCCCCcccccCCCCcHHhc
Confidence 011 3899999999999999999999989999999999999654333211111234
Q ss_pred cCcccccccC-eEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 435 IGTVGVPMTT-VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~p~-~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
.+++|+|+++ .+++|+| +++++++.| ++|||+|+|++++.|||++|+.|++.| .||||+|||.
T Consensus 350 ~~~~G~p~~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl 414 (539)
T 1mdb_A 350 VNTQGKPMSPYDESRVWD-DHDRDVKPG--ETGHLLTRGPYTIRGYYKAEEHNAASFTEDGFYRTGDI 414 (539)
T ss_dssp HHCCCEESSTTCEEEEEC-TTSCBCCTT--CCEEEEEECTTSCSSCTTCHHHHHHHBCTTSCEEEEEE
T ss_pred CCCCCcccCCCceEEEEC-CCCCCCcCC--CcceEEeeCcccchhhcCChhhhhhhccCCCCeecCce
Confidence 5789999976 5899999 888888776 899999999999999999999999999 7999999995
No 9
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=1.3e-57 Score=473.75 Aligned_cols=405 Identities=21% Similarity=0.304 Sum_probs=321.3
Q ss_pred CCcccccccCCCCCCCCCCCCCHHH-HHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCC
Q 010774 23 GPVYRCIYAKDGLLESPAGLESPWQ-FFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNP 101 (501)
Q Consensus 23 ~~~~~~~~~~~~~~~~~~~~~tl~~-~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~ 101 (501)
.+++++..+.... ....++.+ .|.++++++ +++|+++. +.. +.+||+||.++++++|++|+++|+++
T Consensus 9 ~~~~~~~~~~~~~----p~~~~l~~~~l~~~~~~~-~~~A~~~~---~~~----~~~Ty~el~~~~~~lA~~L~~~Gv~~ 76 (548)
T 2d1s_A 9 NIVVGPKPFYPIE----EGSAGTQLRKYMERYAKL-GAIAFTNA---VTG----VDYSYAEYLEKSCCLGKALQNYGLVV 76 (548)
T ss_dssp TSEECCCCSSCCC----SSCHHHHHHHHHHHHHHH-TCEEEEET---TTC----CEEEHHHHHHHHHHHHHHHHHHTCCT
T ss_pred ceEecCCCCCCCC----CCcCcHHHHHHHhhhccc-CCceEEEc---CCC----CEeeHHHHHHHHHHHHHHHHHcCCCC
Confidence 3455555433222 22357999 899999999 99999863 221 58999999999999999999999999
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEec
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFA 181 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~ 181 (501)
||+|+++++|++++++++|||+++|++++|++|.++.+++.++|+.++++++|++.+....+...... ......++.++
T Consensus 77 gd~V~i~~~n~~e~~~~~la~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~-~~~~~~~~~~~ 155 (548)
T 2d1s_A 77 DGRIALCSENCEEFFIPVIAGLFIGVGVAPTNEIYTLRELVHSLGISKPTIVFSSKKGLDKVITVQKT-VTTIKTIVILD 155 (548)
T ss_dssp TCEEEEECSSCTTTHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHCCSEEEECTTTHHHHHHHHHH-STTCCEEEETT
T ss_pred CCEEEEEeCCchhHHHHHHHHHhhCCEEeccCCCCCHHHHHHHHHhcCCeEEEEcHHHHHHHHHHhcC-CCCCCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999876655433211 12234555554
Q ss_pred CCChhhHHHhhhcCceEeeHHHHHhcCCCC-CCCCCC------CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcce
Q 010774 182 NVSSSQKKEAEELGVSCFSWEEFLQLGTLD-CELPPK------KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQ 254 (501)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~ 254 (501)
..... .....++++....... .+.... .++++++|+|||||||.||||++||+++.+.+.....
T Consensus 156 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~ 226 (548)
T 2d1s_A 156 SKVDY---------RGYQCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARD 226 (548)
T ss_dssp CSSCB---------TTBCBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTC
T ss_pred Ccccc---------cccccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhc
Confidence 32100 0123456665443111 111111 2388999999999999999999999999988877655
Q ss_pred eeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHH
Q 010774 255 MFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISN 332 (501)
Q Consensus 255 ~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~ 332 (501)
.+. ...+..+|++++.+|++|.+++.. ++.++ .|+++++.+. ++..+++.++++++|+++++|++++.+++.
T Consensus 227 ~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--- 300 (548)
T 2d1s_A 227 PIY--GNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLTKFDEETFLKTLQDYKCTSVILVPTLFAILNKS--- 300 (548)
T ss_dssp TTT--SCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECCCCCHHHHHHHHHHTTEEEEEECHHHHHHHHHC---
T ss_pred hhh--ccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcCCCCHHHHHHHHHHcCCcEEEecHHHHHHHHhC---
Confidence 410 026778999999999999999886 56667 9999998874 999999999999999999999999998752
Q ss_pred HhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCe
Q 010774 333 KISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPL 411 (501)
Q Consensus 333 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l 411 (501)
+.....++ ++||.+++||+++++++.+++.+.+ ++.+
T Consensus 301 ----------------------------------~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~i 338 (548)
T 2d1s_A 301 ----------------------------------ELLNKYDL--------SNLVEIASGGAPLSKEVGEAVARRFNLPGV 338 (548)
T ss_dssp ----------------------------------SCGGGSCC--------TTCCEEEECSSCCCHHHHHHHHHHTTCSCC
T ss_pred ----------------------------------cccccccc--------cceeEEEEcCccCCHHHHHHHHHHcCCCce
Confidence 11111122 3899999999999999999999998 6789
Q ss_pred eeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-
Q 010774 412 TQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI- 490 (501)
Q Consensus 412 ~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~- 490 (501)
++.||+||++.+++..... ....+++|+|+|+++++|+|.+++++++.| +.|||+|+|++++.|||++|+.|++.|
T Consensus 339 ~~~YG~TE~~~~~~~~~~~-~~~~~~~G~~~~~~~~~i~d~~~~~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~ 415 (548)
T 2d1s_A 339 RQGYGLTETTSAIIITPEG-DDKPGASGKVVPLFKAKVIDLDTKKSLGPN--RRGEVCVKGPMLMKGYVNNPEATKELID 415 (548)
T ss_dssp EEEEECGGGSSEEEECCTT-CCCTTCCBEECTTCEEEEECTTTCCBCCTT--CCEEEEEESTTSCSEETTCHHHHHHHBC
T ss_pred eeccccccccceeeecCcc-cCCCCCCCccCCCceEEEEeCCcCccCCCC--CCeEEEECCHHHhhhhcCChHHhhhccc
Confidence 9999999999877664332 345589999999999999995567766665 899999999999999999999999999
Q ss_pred ccCcccCCCC
Q 010774 491 VDGWFHTEVH 500 (501)
Q Consensus 491 ~dgw~~TGD~ 500 (501)
.+|||+|||.
T Consensus 416 ~~g~~~TGDl 425 (548)
T 2d1s_A 416 EEGWLHTGDI 425 (548)
T ss_dssp TTSCEEEEEE
T ss_pred CCcEEEccCE
Confidence 7999999995
No 10
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=1.2e-58 Score=475.19 Aligned_cols=387 Identities=16% Similarity=0.188 Sum_probs=303.2
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.++|.++++++|+++|+++....++..+..+++||+||.++++++|++|+++|+ +||+|+|+++|++++++++|
T Consensus 22 ~~~tl~~~l~~~a~~~pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~e~~~~~l 100 (480)
T 3t5a_A 22 SVRSLPAALRACARLQPHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRCGS-TGDRVVISAPQGLEYVVAFL 100 (480)
T ss_dssp --CCHHHHHHHHHHHSTTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTSSC-TTCEEEEECCSSHHHHHHHH
T ss_pred CcccHHHHHHHHHHhCCCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhcCC-CCCEEEEEcCCcHHHHHHHH
Confidence 35789999999999999999999871111223445799999999999999999999996 99999999999999999999
Q ss_pred HHHhcCCEEEEecC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCC-CccEEEEecCCChhhHHHhhhcCc
Q 010774 121 ACNSQAITYVPLYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCL-YLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 121 A~~~~G~~~v~l~~---~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
||+++|++++|+++ .++.+++.++|+.++++++|++.+....+......... ....++.++..
T Consensus 101 A~~~~G~v~vpl~~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 167 (480)
T 3t5a_A 101 GALQAGRIAVPLSVPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLL------------- 167 (480)
T ss_dssp HHHHTTCEEEEECSCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGS-------------
T ss_pred HHHHhCcEEEeeCCCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEeccc-------------
Confidence 99999999999999 78899999999999999999999887766544332211 11122222211
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCC------CcEEE
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSE------EDTYF 270 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~------~d~~l 270 (501)
..............++++++|+|||||||.||||++||+++++.+..+...+ .... +|+++
T Consensus 168 --------~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~~~~~~~d~~l 234 (480)
T 3t5a_A 168 --------DLDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGY-----FADTDGIPPPNSALV 234 (480)
T ss_dssp --------CTTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHH-----CTTTTTCCCTTEEEE
T ss_pred --------ccccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHh-----ccccccCCCCCCeEE
Confidence 1111112223445678999999999999999999999999999888776655 4444 89999
Q ss_pred EecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHH
Q 010774 271 SFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKL 344 (501)
Q Consensus 271 ~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~ 344 (501)
+.+|++|.+|+.. ++.+++.|+++++.+. ++..+++.++++++| +.++|+++..++.....
T Consensus 235 ~~~pl~h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~------------ 301 (480)
T 3t5a_A 235 SWLPFYHDMGLVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTT------------ 301 (480)
T ss_dssp ECCCTTSTTHHHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCC------------
T ss_pred EeCCCcCccHHHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcC------------
Confidence 9999999999875 7899999999999862 899999999999999 88999998887753210
Q ss_pred HHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC------CCeeeeeccc
Q 010774 345 FEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLT 418 (501)
Q Consensus 345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~------~~l~~~yG~t 418 (501)
.+.....++ ++||.+++||+++++++.++|.+.++ +.+++.||+|
T Consensus 302 ---------------------~~~~~~~~l--------~~lr~i~~gG~~l~~~~~~~~~~~~~~~~~~~~~~~~~YG~T 352 (480)
T 3t5a_A 302 ---------------------DDDMAGRDL--------GNILTILSGSERVQAATIKRFADRFARFNLQERVIRPSYWLA 352 (480)
T ss_dssp ---------------------TGGGTTCCC--------TTCCEEEECCTTCCHHHHHHHHHHSGGGTCCGGGEEEEEEET
T ss_pred ---------------------cccccccch--------hhhheeeecCCcCCHHHHHHHHHHHhhcCCChhhcccccccc
Confidence 111112222 38999999999999999999999873 3799999999
Q ss_pred ccCcceecccCCC------------------------CcccCcccccccCeEEEEeecCC-CCccCCCCCCCceEEEecC
Q 010774 419 ESCSGCFTSLADV------------------------FNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGN 473 (501)
Q Consensus 419 E~~~~~~~~~~~~------------------------~~~~~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g~ 473 (501)
|++.+++...... ....+++|+|++ ++++|+| ++ +++++.| ++|||||+|+
T Consensus 353 E~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~-~~~~ivd-~~~g~~~~~g--~~GEl~v~g~ 428 (480)
T 3t5a_A 353 EATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS-PIVRIVD-SDTCIECPDG--TVGEIWVHGD 428 (480)
T ss_dssp TTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-SEEEEEE-TTTTEECCTT--BCEEEEEEST
T ss_pred ccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-CEEEEEc-CCCCcCCCCC--CEEEEEEeCC
Confidence 9998877654432 123468999999 9999999 66 6777766 9999999999
Q ss_pred CccccccCCcccchhhh------------ccCcccCCCC
Q 010774 474 TLFSGYYKRPDLTEEVI------------VDGWFHTEVH 500 (501)
Q Consensus 474 ~v~~gY~~~~~~~~~~~------------~dgw~~TGD~ 500 (501)
+++.|||++|+.|++.| .+|||+|||.
T Consensus 429 ~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDl 467 (480)
T 3t5a_A 429 NVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDS 467 (480)
T ss_dssp TSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEE
T ss_pred ccccccccCcchhHHHHhhhhccccCCCCCCCeeeccce
Confidence 99999999999999988 3579999995
No 11
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=4.7e-57 Score=471.27 Aligned_cols=388 Identities=17% Similarity=0.237 Sum_probs=320.1
Q ss_pred CCCCHHHHHHHHHHh-----CCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchh
Q 010774 41 GLESPWQFFCDSAKR-----IPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~-----~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~ 114 (501)
..+++.++|+++++. +|+++|+++. +.. +..+.+||+||.++++++|++|.+. |+++||+|+|+++|+++
T Consensus 36 ~~~~~~~~l~~~a~~~~a~~~p~~~al~~~---~~~-g~~~~~Ty~el~~~~~~lA~~L~~~~Gv~~gd~V~i~~~n~~e 111 (570)
T 3c5e_A 36 KFNFASDVLDHWADMEKAGKRPPSPALWWV---NGK-GKELMWNFRELSENSQQAANVLSGACGLQRGDRVAVVLPRVPE 111 (570)
T ss_dssp BCCHHHHTHHHHHHHHHTTSSCCCEEEEEE---CSS-SCEEEEEHHHHHHHHHHHHHHHHTTTCCCTTCEEEEECCSCHH
T ss_pred cccHHHHHHHHHHhhccccCCCCceEEEEE---cCC-CceeEEeHHHHHHHHHHHHHHHHHccCCCCCCEEEEEcCCCHH
Confidence 345678999999999 9999999986 422 2236899999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhc
Q 010774 115 WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEEL 194 (501)
Q Consensus 115 ~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 194 (501)
+++++|||+++|++++|++|.++.+++.++++.++++++|++.+....+..... ....++.++.++....
T Consensus 112 ~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------- 181 (570)
T 3c5e_A 112 WWLVILGCIRAGLIFMPGTIQMKSTDILYRLQMSKAKAIVAGDEVIQEVDTVAS-ECPSLRIKLLVSEKSC--------- 181 (570)
T ss_dssp HHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEETTTHHHHHHHGG-GCTTCCEEEEESSSCC---------
T ss_pred HHHHHHHHHHcCeEEEecCCCCCHHHHHHHHHhcCCeEEEechHHHHHHHHHhh-cCCceeEEEEecccCc---------
Confidence 999999999999999999999999999999999999999999887766544332 2234455555543211
Q ss_pred CceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHH--HHhhcceeeeeccccCCCCcEEEEe
Q 010774 195 GVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVA--EVLSVDQMFVVTGKVCSEEDTYFSF 272 (501)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~--~~~~~~~~~~~~~~~~~~~d~~l~~ 272 (501)
.....+++++.............++++++|+|||||||.||||+++|+ ++. ..... ..+ ++..+|++++.
T Consensus 182 -~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~-~~~~~~~~~~-~~~-----~~~~~d~~~~~ 253 (570)
T 3c5e_A 182 -DGWLNFKKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYS-SLGLKAKMDA-GWT-----GLQASDIMWTI 253 (570)
T ss_dssp -TTSEEHHHHHHHSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHH-HHHHHHHHHT-TTT-----SCCTTCEEEEC
T ss_pred -cccccHHHHhhcccccccccCCCCCCcEEEEECCCCCCCCCEEEechH-HHHhhhhhhh-hhc-----CCCCCceEEEc
Confidence 013456666654432223344567899999999999999999999999 544 33332 333 67899999999
Q ss_pred cChHHHHHHHH-HHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHH
Q 010774 273 LPLAHIYDQII-ETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFA 348 (501)
Q Consensus 273 ~pl~~~~g~~~-~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 348 (501)
+|++|.+++.. ++.++..|+++++.. +++..+++.++++++|+++++|++++.+++.
T Consensus 254 ~p~~~~~~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------- 314 (570)
T 3c5e_A 254 SDTGWILNILCSLMEPWALGACTFVHLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQ------------------- 314 (570)
T ss_dssp CCTTSHHHHHHTTHHHHHHTCEEEEECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTS-------------------
T ss_pred CchHHHHHHHHHHHHHHHhCceEEEecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhc-------------------
Confidence 99999999884 788999999999985 3999999999999999999999999998751
Q ss_pred HHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceeccc
Q 010774 349 YNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSL 428 (501)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~ 428 (501)
. ....++ ++||.+++||+++++++.++|.+.+|+.+++.||+||++.+++...
T Consensus 315 ------------------~-~~~~~~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~ 367 (570)
T 3c5e_A 315 ------------------D-LSSYKF--------PHLQNCVTVGESLLPETLENWRAQTGLDIRESYGQTETGLTCMVSK 367 (570)
T ss_dssp ------------------C-TTTCCC--------TTCCEEEEESSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCT
T ss_pred ------------------c-cccccc--------ccceEEEEcCCcCCHHHHHHHHHHhCCchhhccchhhcccceecCc
Confidence 0 000111 3899999999999999999999988999999999999987665543
Q ss_pred CCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEe-----cCCccccccCCcccchhhhccCcccCCCC
Q 010774 429 ADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLR-----GNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 429 ~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~-----g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.. ....+++|+|+++++++|+| +++++++.| ++|||+|+ |++++.|||++|+.|++.|.+|||+|||.
T Consensus 368 ~~-~~~~~~vG~p~~~~~v~i~d-~~g~~~~~G--~~GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~~~~~~TGDl 440 (570)
T 3c5e_A 368 TM-KIKPGYMGTAASCYDVQIID-DKGNVLPPG--TEGDIGIRVKPIRPIGIFSGYVDNPDKTAANIRGDFWLLGDR 440 (570)
T ss_dssp TS-CCCTTCCCEECTTCCEEEEC-TTSCBCCTT--CCEEEEEECSSBCCTTCCCEETTCHHHHHHTEETTEEEEEEE
T ss_pred cc-ccCCCcccccCCCceEEEEC-CCCCCCCCC--CCCeeEEeccCCCCchhhccccCChhHhhhhhcCCcccccee
Confidence 32 34558999999999999999 889888776 89999999 99999999999999999999999999995
No 12
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=1.8e-57 Score=469.21 Aligned_cols=376 Identities=20% Similarity=0.258 Sum_probs=313.0
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...|+.+.|+++++++|+++|+++. + +++||+||.++++++|++|++.|+++||+|+++++|++++++++|
T Consensus 4 ~~~tl~~~l~~~a~~~pd~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~l 74 (509)
T 3ivr_A 4 HDFTLADVYRRNAALFPDRTAFMVD----G-----VRLTHRDYLARAERLASGLLRDGVHTGDRVAILSQNCSEMIELIG 74 (509)
T ss_dssp TCCCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHH
T ss_pred CcCCHHHHHHHHHHHCCCceEEEEC----C-----cEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHH
Confidence 4578999999999999999999874 3 689999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|++|.++.+++.++++.++++++|++.+....+..... .......++.++.... .
T Consensus 75 A~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------------~ 139 (509)
T 3ivr_A 75 AVALIGAILLPVNYRLNADEIAFVLGDGAPSVVVAGTDYRDIVAGVLP-SLGGVKKAYAIGDGSG--------------P 139 (509)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHCEEEEEECSTTHHHHHHHGG-GCSSCCEEEESSCCCS--------------S
T ss_pred HHHHhCCEEEecCCCCCHHHHHHHHHhcCceEEEECcchhhhHHhhhc-ccCCceEEEEcCCCCc--------------C
Confidence 999999999999999999999999999999999999987766444432 3345566666654211 1
Q ss_pred HHHHHh-cCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 201 WEEFLQ-LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
+.++.. ............++++++|+|||||||.||||+++|+++++.+..+...+ ++..+|++++.+|++|.+
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~ 214 (509)
T 3ivr_A 140 FAPFKDLASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAW-----RLTEADVNLGMLPLFHVT 214 (509)
T ss_dssp CEEGGGTCCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHH
T ss_pred hhhHhhccCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhh-----CCCCCcEEEEeCCCcchh
Confidence 111222 11222333455789999999999999999999999999999998877766 788999999999999999
Q ss_pred HHHHHHH-HHhcCcEEEEecCCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhcc
Q 010774 280 DQIIETH-CIHKGCSIGFWRGDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKK 358 (501)
Q Consensus 280 g~~~~~~-~l~~G~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (501)
++...+. .+..|+++++...++..+++.++++++|+++++|+++..+++..
T Consensus 215 g~~~~~~~~~~~g~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~---------------------------- 266 (509)
T 3ivr_A 215 GLGLMLTLQQAGGASVIAAKFDPAQAARDIEAHKVTVMAEFAPMLGNILDQA---------------------------- 266 (509)
T ss_dssp HHHHHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC----------------------------
T ss_pred HHHHHHHHHHhCCcEEEecccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc----------------------------
Confidence 9987665 45555555555569999999999999999999999999988631
Q ss_pred CCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCCCcccCc
Q 010774 359 GMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADVFNMIGT 437 (501)
Q Consensus 359 ~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s 437 (501)
...++ +++|.++.+|++ +..+.+.+.+ ++.+++.||+||++++++...... ...+
T Consensus 267 -----------~~~~l--------~~lr~~~~~g~~---~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~--~~~~ 322 (509)
T 3ivr_A 267 -----------APAQL--------ASLRAVTGLDTP---ETIERFEATCPNATFWATFGQSETSGLSTFAPYRD--RPKS 322 (509)
T ss_dssp -----------CGGGG--------TTCCEEEEECCH---HHHHHHHHHCTTCEEEEEEEEGGGTEEEEEEEGGG--STTS
T ss_pred -----------cccch--------hhhheecccCCh---HHHHHHHHhcCCCeEEcccCccccccccccCcccc--CCCc
Confidence 00111 389999999987 8888888888 899999999999998776654432 2255
Q ss_pred ccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 438 VGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 438 ~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+|+++++++|+| +++++++.| ++|||+|+|++++.|||++|+.|++.|.+|||+|||.
T Consensus 323 ~G~p~~~~~~~i~d-~~~~~~~~g--~~GEl~v~g~~~~~gY~~~~~~t~~~f~~g~~~TGDl 382 (509)
T 3ivr_A 323 AGRPLFWRTVAVVD-AEDRPLPPG--EVGEIVLRGPTVFKGYWNNAAATQHAFRNGWHHTGDM 382 (509)
T ss_dssp CCEECTTCEEEEEC-TTSCBCCTT--CCEEEEEESTTSCCEETTCHHHHHHHTGGGSEEEEEE
T ss_pred ccccCCCcEEEEEC-CCCCCCCCC--CceEEEEecCCccccccCCHHHhHHHhhcCCcccccE
Confidence 99999999999999 888888776 9999999999999999999999999999999999995
No 13
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=4.1e-57 Score=472.47 Aligned_cols=366 Identities=18% Similarity=0.216 Sum_probs=304.8
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....++.++|+++++++|+++|+++. + +++||+||.++++++|++|+++|+++||+|+|+++|++++++++
T Consensus 72 ~~~~~l~~~l~~~a~~~pd~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~ 142 (570)
T 4gr5_A 72 PAGACVHELFEAQAARAPDAVALLHE---A------DELTYGALNERANRLAHRLVGLGVAPGTLVGVHLERGFDMVVAL 142 (570)
T ss_dssp CCSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred CccCCHHHHHHHHHHHCCCCeEEECC---C------CcEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHH
Confidence 34578999999999999999999875 3 58999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 120 EACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|||+++|++++|++|.++.+++.++++.++++++|++......+. ....+. +.+..
T Consensus 143 lA~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~--------~~~~~~-~~~~~--------------- 198 (570)
T 4gr5_A 143 LAVLKAGGGYTMLDPQFPVERLALSLEDTGAPLLVTSRPLSGRLT--------GTTTLY-VEDEA--------------- 198 (570)
T ss_dssp HHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTSSC--------SSEEEE-CCC-----------------
T ss_pred HHHHHHCCEEEEcCCCChHHHHHHHHHhcCCCEEEecchhhhccc--------CCccee-eeccc---------------
Confidence 999999999999999999999999999999999999886544321 111111 11110
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIY 279 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~ 279 (501)
..............++++++|+|||||||.||||+++|+++.+.+... ..+ .+..+|++++.+|++|..
T Consensus 199 -----~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~-~~~-----~~~~~d~~l~~~p~~~~~ 267 (570)
T 4gr5_A 199 -----ASDAPAGNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLGQ-DYA-----GFGPDEVFLQCSPVSWDA 267 (570)
T ss_dssp ----------CCCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSSC-CSS-----CCSTTCEEEECSCTTSST
T ss_pred -----cccccccccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHhh-hhc-----CCCCCCEEEEecCccHHH
Confidence 000111122334567999999999999999999999999998776652 222 678899999999999877
Q ss_pred HHHHHHHHHhcCcEEEEecC---CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 280 DQIIETHCIHKGCSIGFWRG---DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 280 g~~~~~~~l~~G~~~~~~~~---~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
+...++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++....
T Consensus 268 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------------------ 323 (570)
T 4gr5_A 268 FGLELFGALLFGARCVLQSGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPE------------------------ 323 (570)
T ss_dssp HHHHHHHHHTTTCEEEECSSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGG------------------------
T ss_pred HHHHHHHHHhcCCEEEEcCCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchh------------------------
Confidence 76678889999999999763 899999999999999999999999998763110
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC---C
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---F 432 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~---~ 432 (501)
++ ++||.+++||+++++++.+++.+.+ ++.+++.||+||++++++...... .
T Consensus 324 ----------------~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~l~~~YG~TE~~~~~~~~~~~~~~~~ 379 (570)
T 4gr5_A 324 ----------------AF--------EGVRYAITGGEPASVPHVAKARRDHPALRLGNGYGPAESMGFTTHHAVVAGDLS 379 (570)
T ss_dssp ----------------GG--------TTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCGGGTT
T ss_pred ----------------hC--------CCceEEEEecccCCHHHHHHHHHhCCCcEEEEeechhhheeeeeeeeecccccC
Confidence 01 3899999999999999999998887 789999999999988766543322 2
Q ss_pred cccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-cc--------CcccCCCC
Q 010774 433 NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VD--------GWFHTEVH 500 (501)
Q Consensus 433 ~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~d--------gw~~TGD~ 500 (501)
....++|+|+++++++|+| +++++++.| ++|||+|+|++++.|||++|+.|++.| .| |||+|||.
T Consensus 380 ~~~~~iG~p~~~~~v~i~d-~~~~~~~~G--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDl 453 (570)
T 4gr5_A 380 GTALPIGVPLAGKRAYVLD-DDLKPAANG--ALGELYVAGAGLAHGYVSRPALTAERFVADPFAGPGGERMYRTGDL 453 (570)
T ss_dssp SSSCCCBEECTTEEEEEEC-TTSCBCCTT--CEEEEEEEETTCCCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEE
T ss_pred CCccccceeeCCCEEEEEC-CCCCCCCCC--CcEEEEEeecccchhcCCCchhhhcccccCCCCCCCCCEEEeCCCe
Confidence 3346799999999999999 999888776 999999999999999999999999988 33 79999995
No 14
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=5.8e-57 Score=464.78 Aligned_cols=371 Identities=20% Similarity=0.251 Sum_probs=301.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.|+.++|.++++++|+++|+++. +.+ +++||+||.++++++|++|+++|+++||+|+++++|++++++++||
T Consensus 1 M~tl~~~l~~~a~~~p~~~a~~~~---~~~----~~~Ty~el~~~~~~~A~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA 73 (504)
T 1t5h_X 1 MQTVNEMLRRAATRAPDHCALAVP---ARG----LRLTHAELRARVEAVAARLHADGLRPQQRVAVVAPNSADVVIAILA 73 (504)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEEET---TTT----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHH
T ss_pred CCcHHHHHHHHHHhCCCceEEEEc---CCC----ceeEHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 468999999999999999999864 322 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE--cCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV--QENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
|+++|++++|++|.++.+++.++++.++++++|+ +......+..... .++ ++.
T Consensus 74 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~----~~~-~~~-------------------- 128 (504)
T 1t5h_X 74 LHRLGAVPALLNPRLKSAELAELIKRGEMTAAVIAVGRQVADAIFQSGS----GAR-IIF-------------------- 128 (504)
T ss_dssp HHHHTCEEEEECTTSCHHHHHHHHHHTTCSEEEECC--CHHHHHHHHCC----CCE-EEE--------------------
T ss_pred HHHhCcEEEecCCccChHHHHHHHhhcCCcEEEEecchhhhhhhhhccc----cce-eEE--------------------
Confidence 9999999999999999999999999999999999 6654443311111 111 222
Q ss_pred eHHHHHhcC-----CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccC--CCCcEEEEe
Q 010774 200 SWEEFLQLG-----TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVC--SEEDTYFSF 272 (501)
Q Consensus 200 ~~~~~~~~~-----~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~--~~~d~~l~~ 272 (501)
++++.... ..........++++++|+|||||||.||||+++|+++.+.+..+...+ ++ ..+|++++.
T Consensus 129 -~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~-----~~~~~~~~~~l~~ 202 (504)
T 1t5h_X 129 -LGDLVRDGEPYSYGPPIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQV-----GLRHGRHNVVLGL 202 (504)
T ss_dssp -GGGTEETTEECCCSCCCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTT-----CCCSSTTCEEEEC
T ss_pred -ecchhhcCcccccCCccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhh-----CCCCCCCceEEee
Confidence 22221110 111111344678999999999999999999999999998887765554 55 788999999
Q ss_pred cChHHHHHHH-HHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHH
Q 010774 273 LPLAHIYDQI-IETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (501)
Q Consensus 273 ~pl~~~~g~~-~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
+|++|.+++. .++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++.....
T Consensus 203 ~p~~~~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----------------- 265 (504)
T 1t5h_X 203 MPLYHVVGFFAVLVAALALDGTYVVVEEFRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHA----------------- 265 (504)
T ss_dssp SCTTSHHHHTTTHHHHHHTTCEEEECSSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCT-----------------
T ss_pred cchhhcchHHHHHHHHHHcCceEEeCCCCCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccc-----------------
Confidence 9999999986 48899999999999875 9999999999999999999999999987632100
Q ss_pred HHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC
Q 010774 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (501)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~ 430 (501)
....++ ++||.+++||+++++++.++|++.++..+++.||+||++ ++....
T Consensus 266 ------------------~~~~~l--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~-~~~~~~-- 316 (504)
T 1t5h_X 266 ------------------GSSLKL--------DSLRHVTFAGATMPDAVLETVHQHLPGEKVNIYGTTEAM-NSLYMR-- 316 (504)
T ss_dssp ------------------TCCCCC--------TTCCEEEECCTTCCHHHHHHHHHHCCSEEEEEEEETTTE-EEEEEE--
T ss_pred ------------------cccccC--------ccccEEEEcCCcCCHHHHHHHHHhcCcceeeeecccccc-cccccc--
Confidence 000011 389999999999999999999999999999999999993 333222
Q ss_pred CCcccCcccccccCeEEEEeecCCC---CccCCCCCCCceEEEe-cCCccccccCCcccchhhhccCcccCCCC
Q 010774 431 VFNMIGTVGVPMTTVEARLESVPEM---GYDALSSVPRGEICLR-GNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 431 ~~~~~~s~G~p~p~~~i~I~d~~~~---~~~~~~~~~~Gei~v~-g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
....+++|+|.++++++|+| +++ +.++.| +.|||+|+ |++++.|||++|+.|++.|.||||+|||.
T Consensus 317 -~~~~~~~g~p~~~~~~~i~~-~~~~~~~~~~~g--~~GEl~v~gg~~~~~GY~~~~~~t~~~f~~g~~~TGDl 386 (504)
T 1t5h_X 317 -QPKTGTEMAPGFFSEVRIVR-IGGGVDEIVANG--EEGELIVAASDSAFVGYLNQPQATAEKLQDGWYRTSDV 386 (504)
T ss_dssp -SCSSSSEEBCCTTCCEEEEC-TTSCTTCBCCTT--CCEEEEEECCTTSCCCBTTCHHHHHHHEETTEEEEEEE
T ss_pred -CCCCCccccCCCCCceeEEe-ccCCCCCcCCCC--CcceEEEeCCceeeceecCCchhhhhhhcCCccccCcE
Confidence 23458899999999999999 766 666655 89999999 99999999999999999999999999995
No 15
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=5e-57 Score=468.20 Aligned_cols=387 Identities=18% Similarity=0.227 Sum_probs=309.8
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
.++++.++|+++++ +|+++|+++. + +++||+||.++++++|++|+++|+++||+|+++++|++++++++|
T Consensus 22 ~~~~~~~~l~~~~~-~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~~~~~~~l 91 (529)
T 2v7b_A 22 LFNFAAYLFRLNET-RAGKTAYIDD---T------GSTTYGELEERARRFASALRTLGVHPEERILLVMLDTVALPVAFL 91 (529)
T ss_dssp CCCHHHHHHHHTGG-GTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSTHHHHHHH
T ss_pred ceeHHHHHHHhhhc-cCCceEEEeC---C------CCccHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcHHHHHHHH
Confidence 44568999999999 9999999864 2 479999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCc-cEEEEecCCChhhHHHhhhcCceEe
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYL-KTIVSFANVSSSQKKEAEELGVSCF 199 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~-~~v~~~~~~~~~~~~~~~~~~~~~~ 199 (501)
||+++|++++|+++.++.+++.++++.++++++|++.+....+....... ... ..++.++..... .....
T Consensus 92 A~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~--------~~~~~ 162 (529)
T 2v7b_A 92 GALYAGVVPVVANTLLTPADYVYMLTHSHARAVIASGALVQNVTQALESA-EHDGCQLIVSQPRESE--------PRLAP 162 (529)
T ss_dssp HHHHHTCEEEECCTTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHHHHHCC----CCEEEEECC--------------CCC
T ss_pred HHHHcCceEEecCcccCHHHHHHHHhccCCeEEEechhhhhHHHHHHhhc-cccCceEEEecccccc--------ccccc
Confidence 99999999999999999999999999999999999987665543322111 122 334443322110 00122
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHH-HHHHhhcceeeeeccccCCCCcEEEEecChHHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAI-VAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l-~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
.++++..............++++++|+|||||||.||||+++|+++ ..........+ .+..+|++++.+|++|.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~ 237 (529)
T 2v7b_A 163 LFEELIDAAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPIL-----GIAENDVVFSAAKLFFA 237 (529)
T ss_dssp BHHHHHHTSCCCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCC-----CCCTTCEEEESSCTTSH
T ss_pred chhhhhccCCCcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhcc-----CCCCCcEEEEeecHHHH
Confidence 4666655332222333456789999999999999999999999999 66665554444 77899999999999999
Q ss_pred HHHHH-HHHHHhcCcEEEEec--CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhh
Q 010774 279 YDQII-ETHCIHKGCSIGFWR--GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGN 355 (501)
Q Consensus 279 ~g~~~-~~~~l~~G~~~~~~~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (501)
+++.. ++.++..|+++++.. +++..+++.++++++|+++++|+++..+++...
T Consensus 238 ~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------------------------ 293 (529)
T 2v7b_A 238 YGLGNGLTFPLSVGATAILMAERPTADAIFARLVEHRPTVFYGVPTLYANMLVSPN------------------------ 293 (529)
T ss_dssp HHHHHHTHHHHHHTCEEECCCSCCCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTT------------------------
T ss_pred HHHHHHHHHHHhcCcEEEEecCCCCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcc------------------------
Confidence 99875 678999999999873 399999999999999999999999998864100
Q ss_pred hccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCccc
Q 010774 356 MKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMI 435 (501)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~ 435 (501)
.+... ..++|.+++||+++++++.++|.+.+|+.+++.||+||++.+++...... ...
T Consensus 294 ----------~~~~~-----------~~~lr~~~~gGe~l~~~~~~~~~~~~g~~i~~~YG~TE~~~~~~~~~~~~-~~~ 351 (529)
T 2v7b_A 294 ----------LPARA-----------DVAIRICTSAGEALPREIGERFTAHFGCEILDGIGSTEMLHIFLSNRAGA-VEY 351 (529)
T ss_dssp ----------CCCGG-----------GCCCCEEEECSSCCCHHHHHHHHHHHSCCEEEEEECTTTSSEEEECCTTC-CCT
T ss_pred ----------ccccc-----------CCceEEEEEcCCCCCHHHHHHHHHHhCCceeeeEchhhcCceeeccccCC-Ccc
Confidence 00000 02799999999999999999999999999999999999977665544333 445
Q ss_pred CcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++|+|+++++++|+| +++++++.| ++|||+|+|++++.|||++++.|++.|.+|||+|||.
T Consensus 352 ~~~G~p~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~~~~gY~~~~~~t~~~f~~~~~~TGDl 413 (529)
T 2v7b_A 352 GTTGRPVPGYEIELRD-EAGHAVPDG--EVGDLYIKGPSAAVMYWNNREKSRATFLGEWIRSGDK 413 (529)
T ss_dssp TSCCEECTTCEEEEEC-TTSCBCCTT--SCEEEEEECTTCCCCBTTCHHHHHHHEETTEEEEEEE
T ss_pred CCcccCCCCCEEEEEC-CCCCCCCCC--CccEEEEecCCcccccCCChHHHHHhhhcCCcccCce
Confidence 8999999999999999 999888776 8999999999999999999999999999999999994
No 16
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=3.2e-57 Score=479.65 Aligned_cols=400 Identities=14% Similarity=0.186 Sum_probs=321.3
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
+++.++|+++++++|+++|+++. +...+..+++||+||.++++++|++|+++|+++||+|+|+++|++++++++|||
T Consensus 76 n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~lTY~eL~~~v~~lA~~L~~~Gv~~Gd~V~i~~~~~~e~vva~lA~ 152 (652)
T 1pg4_A 76 NLAANCLDRHLQENGDRTAIIWE---GDDTSQSKHISYRELHRDVCRFANTLLDLGIKKGDVVAIYMPMVPEAAVAMLAC 152 (652)
T ss_dssp CHHHHHTGGGHHHHTTSEEEEEE---CSSTTCEEEEEHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSSHHHHHHHHHH
T ss_pred hHHHHHHHHHhccCCCceEEEEE---cCCCCceeEEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 45788999999999999999986 433344578999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhhhcCccCC-CCccEEEEecCCChhhHHHhh
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCC-LYLKTIVSFANVSSSQKKEAE 192 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~---------~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 192 (501)
+++|++++|+++.++.+++.++++.++++++|+++.... .+.+...... ..+..++.+........
T Consensus 153 ~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~---- 228 (652)
T 1pg4_A 153 ARIGAVHSVIFGGFSPEAVAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRTGSDID---- 228 (652)
T ss_dssp HHHTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSSCCCCC----
T ss_pred HHcCcEEEecCCCCCHHHHHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCCCCccc----
Confidence 999999999999999999999999999999999876432 1212111110 13456666653211000
Q ss_pred hcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHh-hcceeeeeccccCCCCcEEEE
Q 010774 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL-SVDQMFVVTGKVCSEEDTYFS 271 (501)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~-~~~~~~~~~~~~~~~~d~~l~ 271 (501)
........+++++.............++++++|+|||||||.||||+++|++++.... .+...+ ++..+|++++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~l~ 303 (652)
T 1pg4_A 229 WQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVF-----DYHPGDIYWC 303 (652)
T ss_dssp CCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHT-----TCCTTCEEEE
T ss_pred ccCCCceeHHHHHhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhc-----CCCCCCEEEE
Confidence 0001134677777544322333445678999999999999999999999999887664 333334 6789999999
Q ss_pred ecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHH
Q 010774 272 FLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (501)
Q Consensus 272 ~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (501)
..|++|.+++.+ ++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+++....
T Consensus 304 ~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~------------- 370 (652)
T 1pg4_A 304 TADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDK------------- 370 (652)
T ss_dssp CSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGG-------------
T ss_pred ccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCcc-------------
Confidence 999999999964 8899999999999863 789999999999999999999999998752110
Q ss_pred HHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC---CCeeeeecccccCc
Q 010774 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESCS 422 (501)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~l~~~yG~tE~~~ 422 (501)
...++++ ++||.+++||+++++++.+++.+.+| +.+++.||+||+++
T Consensus 371 ----------------------~~~~~~l--------~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~ 420 (652)
T 1pg4_A 371 ----------------------AIEGTDR--------SSLRILGSVGEPINPEAWEWYWKKIGKEKCPVVDTWWQTETGG 420 (652)
T ss_dssp ----------------------GTTTCCC--------TTCCEEEEESSCCCHHHHHHHHHHTTTTCSCEEEEBCCGGGSS
T ss_pred ----------------------ccccCCc--------CceEEEEEecCCCCHHHHHHHHHHhCCCCCcEEccccCccccc
Confidence 0111222 38999999999999999999999887 89999999999998
Q ss_pred ceecccCC-CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEec--CCccccccCCcccchhhh---ccCccc
Q 010774 423 GCFTSLAD-VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGWFH 496 (501)
Q Consensus 423 ~~~~~~~~-~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~---~dgw~~ 496 (501)
+++..... ....++++|+|++|++++|+| +++++++.| +.|||+|+| |+++.|||++++.+.+.+ .+|||+
T Consensus 421 ~~~~~~~~~~~~~~~s~G~p~~g~~v~i~d-~~g~~v~~g--~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~~~g~y~ 497 (652)
T 1pg4_A 421 FMITPLPGAIELKAGSATRPFFGVQPALVD-NEGHPQEGA--TEGNLVITDSWPGQARTLFGDHERFEQTYFSTFKNMYF 497 (652)
T ss_dssp CSBCCCTTTCCBCTTCCBSBCTTCCEEEEC-TTCCBCCSS--EEEEEEECSCCTTCCCEETTCHHHHHHHHHSSSTTSEE
T ss_pred ceecCCCCCcCccCCccccCcCCCeEEEEC-CCCCCcCCC--ceEEEEEccCCCchhhhhcCCHHHHHhhhhhcCCCEEE
Confidence 76655432 234568999999999999999 889887765 899999999 799999999999888776 389999
Q ss_pred CCCC
Q 010774 497 TEVH 500 (501)
Q Consensus 497 TGD~ 500 (501)
|||.
T Consensus 498 TGDl 501 (652)
T 1pg4_A 498 SGDG 501 (652)
T ss_dssp EEEE
T ss_pred CCcE
Confidence 9995
No 17
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=1.6e-57 Score=468.44 Aligned_cols=377 Identities=22% Similarity=0.334 Sum_probs=306.7
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcC
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 126 (501)
++|.+.++++|+++++... +.. + +++||+||.++++++|++|+++|+++||+|+++++|++++++++|||+++|
T Consensus 4 ~l~~~~a~~~p~~~a~~~~---~~~-~--~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~~~~~~~lA~~~~G 77 (503)
T 4fuq_A 4 NLFARLFDKLDDPHKLAIE---TAA-G--DKISYAELVARAGRVANVLVARGLQVGDRVAAQTEKSVEALVLYLATVRAG 77 (503)
T ss_dssp CHHHHHHSCCSCTTSEEEE---ETT-C--CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSCHHHHHHHHHHHHTT
T ss_pred hHHHHHHHhCCCCceEEEe---cCC-C--cEEEHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCCHHHHHHHHHHHHcC
Confidence 4688999999999999864 211 1 589999999999999999999999999999999999999999999999999
Q ss_pred CEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHHHHHh
Q 010774 127 ITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQ 206 (501)
Q Consensus 127 ~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (501)
++++|++|.++.+++.++++.++++++|++.+....+....... . ..+..+..... ..+.+...
T Consensus 78 a~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~-------------~~~~~~~~ 141 (503)
T 4fuq_A 78 GVYLPLNTAYTLHELDYFITDAEPKIVVCDPSKRDGIAAIAAKV-G--ATVETLGPDGR-------------GSLTDAAA 141 (503)
T ss_dssp CEEEECCTTCCHHHHHHHHHHHCCSEEEECGGGTTTTHHHHHHH-T--CEEEECCTTSC-------------SHHHHHHH
T ss_pred cEEEecCCCCCHHHHHHHHHhcCCcEEEECchhhHHHHHHHhhc-C--ceEEEecCCcc-------------cccchhhh
Confidence 99999999999999999999999999999986554433222111 0 13333332211 01222222
Q ss_pred cCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHH-HH
Q 010774 207 LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ET 285 (501)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~ 285 (501)
............++++++|+|||||||.||||+++|+++.+....+...+ .+..+|++++.+|++|.+|+.. .+
T Consensus 142 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~~~~~p~~~~~g~~~~~~ 216 (503)
T 4fuq_A 142 GASEAFATIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYW-----RFTPDDVLIHALPIYHTHGLFVASN 216 (503)
T ss_dssp TSCSCCCCCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCSSSHCCCCCCHH
T ss_pred cCCCCcCcCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEeCChHHHHHHHHHHH
Confidence 22222233455679999999999999999999999999999988877766 7889999999999999999764 77
Q ss_pred HHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCC
Q 010774 286 HCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNK 364 (501)
Q Consensus 286 ~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 364 (501)
.+++.|+++++.+. ++..+++.++ ++|+++++|+++..+++.
T Consensus 217 ~~l~~g~~~~~~~~~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~----------------------------------- 259 (503)
T 4fuq_A 217 VTLFARGSMIFLPKFDPDKILDLMA--RATVLMGVPTFYTRLLQS----------------------------------- 259 (503)
T ss_dssp HHHHTTCEEEECSSCCHHHHHHHHT--TCCEEEECHHHHHHHHTC-----------------------------------
T ss_pred HHHHhCCEEEEcCCCCHHHHHHHHh--hcCEEEEHHHHHHHHHhC-----------------------------------
Confidence 88999999998875 9999999998 899999999999998752
Q ss_pred cchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccC
Q 010774 365 AAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTT 444 (501)
Q Consensus 365 ~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~ 444 (501)
+.....++ +++|.+++||+++++++.+.|.+.+++++++.||+||++.+++. ..+....++++|+|+|+
T Consensus 260 --~~~~~~~~--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~-~~~~~~~~~~~G~p~~~ 328 (503)
T 4fuq_A 260 --PRLTKETT--------GHMRLFISGSAPLLADTHREWSAKTGHAVLERYGMTETNMNTSN-PYDGDRVPGAVGPALPG 328 (503)
T ss_dssp --TTCSTTTT--------TTCCEEEECSSCCCHHHHHHHHHHHSCCEEECCEETTTEECBCC-CSSSCCCTTEEEEBCTT
T ss_pred --CCccccch--------hhcEEEEECCCCCCHHHHHHHHHHhCCCccceEcccccCccccc-CCCCCCcCCccccCCCC
Confidence 11111112 38999999999999999999999999999999999999876543 33344556899999999
Q ss_pred eEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 445 VEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 445 ~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
++++|+|.+++++++.| ++|||+|+|++++.|||++|+.|++.| .||||+|||.
T Consensus 329 ~~~~i~d~~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~~~TGDl 383 (503)
T 4fuq_A 329 VSARVTDPETGKELPRG--DIGMIEVKGPNVFKGYWRMPEKTKSEFRDDGFFITGDL 383 (503)
T ss_dssp CEEEEECTTTCCBCCTT--CCEEEEEESTTSCCCBTTCHHHHHHTBCTTSCEEEEEE
T ss_pred eEEEEEECCCCCCCcCC--CceEEEEECCchhhhhcCChhhhHhhhCCCCCeEccee
Confidence 99999995667777666 999999999999999999999999999 6999999995
No 18
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=7.6e-57 Score=476.95 Aligned_cols=401 Identities=19% Similarity=0.240 Sum_probs=320.8
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHH-hCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMR-SRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~-~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+++.+.|+++++.+|+++|+++. +...+..+++||+||.++++++|++|+ ++|+++||+|+|+++|++++++++||
T Consensus 82 n~~~~~l~~~a~~~pd~~Al~~~---~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~Gv~~Gd~V~i~~~~~~e~v~a~lA 158 (663)
T 1ry2_A 82 NACYNCVDRHALKTPNKKAIIFE---GDEPGQGYSITYKELLEEVCQVAQVLTYSMGVRKGDTVAVYMPMVPEAIITLLA 158 (663)
T ss_dssp CHHHHHTHHHHTTCTTSEEEEEE---CSSTTCCEEEEHHHHHHHHHHHHHHHHHTSCCCTTCEEEECCCSSHHHHHHHHH
T ss_pred cHHHHHHHHHhccCCCceEEEEE---cCCCCceEEEEHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHH
Confidence 56889999999999999999986 433344578999999999999999999 99999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh---------hhhhcCccCCCCccEEEEecCCChhhHHHhh
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP---------SILSCLPRCCLYLKTIVSFANVSSSQKKEAE 192 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~---------~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 192 (501)
|+++|++++|+++.++.+++.++++.+++++||+++.... .+.+.. .....++.++++........ .
T Consensus 159 ~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~vi~~~~~~~~~~---~ 234 (663)
T 1ry2_A 159 ISRIGAIHSVVFAGFSSNSLRDRINDGDSKVVITTDESNRGGKVIETKRIVDDAL-RETPGVRHVLVYRKTNNPSV---A 234 (663)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHT-TSCTTCCEEEEECSSCCSSC---C
T ss_pred HHHcCCEEEeeCCCCCHHHHHHHHHhcCCeEEEEccccccCCcccchHHHHHHHH-HhCCCCceEEEEecCCCCcc---c
Confidence 9999999999999999999999999999999999876532 121222 22234566666653211000 0
Q ss_pred hcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhh-cceeeeeccccCCCCcEEEE
Q 010774 193 ELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLS-VDQMFVVTGKVCSEEDTYFS 271 (501)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~-~~~~~~~~~~~~~~~d~~l~ 271 (501)
........+++++.......+.....++++++|+|||||||.||||+++|.+++..... +...+ .+..+|++++
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~~d~~~~ 309 (663)
T 1ry2_A 235 FHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTF-----DTHQEDVFFT 309 (663)
T ss_dssp CCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHS-----CCCSSCEEEE
T ss_pred cCCCccccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhc-----CCCCCcEEEE
Confidence 00112346777765443223344456789999999999999999999999998876643 33334 6788999999
Q ss_pred ecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHH
Q 010774 272 FLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLF 345 (501)
Q Consensus 272 ~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~ 345 (501)
..|++|..++.+ ++.+|+.|+++++.+. ++..+++.|+++++|+++++|++++.+.+..
T Consensus 310 ~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~--------------- 374 (663)
T 1ry2_A 310 AGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAG--------------- 374 (663)
T ss_dssp CSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSC---------------
T ss_pred cCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcC---------------
Confidence 999999999864 8899999999999863 7899999999999999999999999886421
Q ss_pred HHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC---CCeeeeecccccCc
Q 010774 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG---APLTQGYGLTESCS 422 (501)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~---~~l~~~yG~tE~~~ 422 (501)
....++.++ ++||.+++||+++++++.+++.+.+| +.+++.||+||+++
T Consensus 375 --------------------~~~~~~~~l--------~sLr~i~~gGe~l~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~ 426 (663)
T 1ry2_A 375 --------------------DSYIENHSL--------KSLRCLGSVGEPIAAEVWEWYSEKIGKNEIPIVDTYWQTESGS 426 (663)
T ss_dssp --------------------TTSSSSCCC--------TTCCEEEECSSCCCHHHHHHHHHTTSCSSSCEEECBCCTTTCS
T ss_pred --------------------ccccccCCc--------CceEEEEEEcCCCCHHHHHHHHHHhCCCCceEEEeECCccccC
Confidence 000111222 38999999999999999999999887 89999999999987
Q ss_pred ceecccC--CCCcccCcccccccCeEEEEeecC-CCCccCCCCCCCceEEEec--CCccccccCCcccchhhh---ccCc
Q 010774 423 GCFTSLA--DVFNMIGTVGVPMTTVEARLESVP-EMGYDALSSVPRGEICLRG--NTLFSGYYKRPDLTEEVI---VDGW 494 (501)
Q Consensus 423 ~~~~~~~--~~~~~~~s~G~p~p~~~i~I~d~~-~~~~~~~~~~~~Gei~v~g--~~v~~gY~~~~~~~~~~~---~dgw 494 (501)
+++.... ....+++++|+|++|++++|+| + ++++++. .++.|||+|+| |+++.|||++++.+.+.| .+||
T Consensus 427 ~~~~~~~~~~~~~~~gs~G~p~~g~~v~i~d-~~~g~~v~~-~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~~~g~ 504 (663)
T 1ry2_A 427 HLVTPLAGGVTPMKPGSASFPFFGIDAVVLD-PNTGEELNT-SHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNPYPGY 504 (663)
T ss_dssp CSEECCTTTCCCCCTTCCCEECTTCCEEEEC-SSSTTCEEC-SSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSSSTTS
T ss_pred eeeccCCCCCcccCCCccccCcCCCeEEEEc-CCCCCcCCC-CCcceEEEEecCCCchhcccccChHHHHHhhhcCCCCE
Confidence 7665543 2244569999999999999999 7 7877765 13899999999 589999999999988877 3899
Q ss_pred ccCCCC
Q 010774 495 FHTEVH 500 (501)
Q Consensus 495 ~~TGD~ 500 (501)
|+|||.
T Consensus 505 y~TGDl 510 (663)
T 1ry2_A 505 YFTGDG 510 (663)
T ss_dssp EEEEEE
T ss_pred EEcCCE
Confidence 999995
No 19
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=1.6e-56 Score=495.81 Aligned_cols=419 Identities=22% Similarity=0.290 Sum_probs=330.4
Q ss_pred CCCCCCCCCCCcccccccCCCCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHH
Q 010774 14 PAADGKPSGGPVYRCIYAKDGLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSA 93 (501)
Q Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~ 93 (501)
...+..+....+|++..+...+ +...|+.++|.++++++|+++|+++. +.. +.+||+||.++++++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~----p~~~tl~~~l~~~a~~~pd~~Al~~~---~~~----~~~TY~eL~~~~~~lA~~ 104 (979)
T 3tsy_A 36 EKQSNNNNSDVIFRSKLPDIYI----PNHLSLHDYIFQNISEFATKPCLING---PTG----HVYTYSDVHVISRQIAAN 104 (979)
T ss_dssp ---------CCCBCCSSCCCCC----CTTSCHHHHHTTTGGGTTTSEEEEET---TTC----CEEEHHHHHHHHHHHHHH
T ss_pred hhcccCCCCCceeecCCCCCCC----CCCCCHHHHHHHHHHhCCCCeEEEEC---CCC----cEEEHHHHHHHHHHHHHH
Confidence 3344455667778777665333 33579999999999999999999875 322 589999999999999999
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCC
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLY 173 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~ 173 (501)
|+++|+++||+|+|+++|++++++++|||+++|++++|++|.++.+++.++++.++++++|++.+..+.+.......
T Consensus 105 L~~~Gv~~gd~V~i~~~ns~e~~v~~lA~~~~Ga~~vpl~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~--- 181 (979)
T 3tsy_A 105 FHKLGVNQNDVVMLLLPNCPEFVLSFLAASFRGATATAANPFFTPAEIAKQAKASNTKLIITEARYVDKIKPLQNDD--- 181 (979)
T ss_dssp HHHTTCCTTCEEEEECSSCHHHHHHHHHHHHHTCEEEEECTTSCHHHHHHHHHHHTEEEEEECSTTTTTSHHHHHTS---
T ss_pred HHHcCCCCcCEEEEEeCCCHHHHHHHHHHHHcCCEEEeeCCCCCHHHHHHHHHHcCCeEEEEChHHHHHHHHHhhcC---
Confidence 99999999999999999999999999999999999999999999999999999999999999987766554332211
Q ss_pred ccEEEEecCCChhhHHHhhhcCceEeeHHHHHhcCCC---CCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHh
Q 010774 174 LKTIVSFANVSSSQKKEAEELGVSCFSWEEFLQLGTL---DCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVL 250 (501)
Q Consensus 174 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~ 250 (501)
...++.++..... ........+.++...... ..+.....++++++|+|||||||.||||+++|+++++.+.
T Consensus 182 ~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~ 255 (979)
T 3tsy_A 182 GVVIVCIDDNESV------PIPEGCLRFTELTQSTTEASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVA 255 (979)
T ss_dssp CCEEEECCCCTTS------CCCTTEEEGGGTSSCCSGGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHH
T ss_pred CceEEEeCCcccc------cCCcccccHHHHhhccccccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHH
Confidence 1234444332110 001123455555433311 2233445789999999999999999999999999998876
Q ss_pred hcceeeeeccccCCCCcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHH
Q 010774 251 SVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (501)
Q Consensus 251 ~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (501)
...... .....+..+|++++.+|++|.+++.. ++.++..|+++++.+. ++..+++.++++++|+++++|+++..+++
T Consensus 256 ~~~~~~-~~~~~~~~~d~~l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 334 (979)
T 3tsy_A 256 QQVDGE-NPNLYFHSDDVILCVLPMFHIYALNSIMLCGLRVGAAILIMPKFEINLLLELIQRCKVTVAPMVPPIVLAIAK 334 (979)
T ss_dssp HHHCSS-SCSSCCCSSCEEEECSCSSSHHHHHHTHHHHHHHTCEEEECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHH
T ss_pred HHHHhh-cccccCCCCCEEEEECchHHHHHHHHHHHHHHhcCcEEEEeCCCCHHHHHHHHHHhCCeEEEcHHHHHHHHHh
Confidence 654321 11125778999999999999999975 7889999999999875 99999999999999999999999999876
Q ss_pred HHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-
Q 010774 329 GISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS- 407 (501)
Q Consensus 329 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~- 407 (501)
. ......++ ++||.+++||+++++++.+++.+.+
T Consensus 335 ~-------------------------------------~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~ 369 (979)
T 3tsy_A 335 S-------------------------------------SETEKYDL--------SSIRVVKSGAAPLGKELEDAVNAKFP 369 (979)
T ss_dssp C-------------------------------------GGGGTSCC--------TTCCEEEESSCCCCSSHHHHHHHHCT
T ss_pred C-------------------------------------ccccCCCc--------cceEEEEEcCCCCCHHHHHHHHHHCC
Confidence 2 11222222 3899999999999999999999988
Q ss_pred CCCeeeeecccccCcceeccc----CCCCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCc
Q 010774 408 GAPLTQGYGLTESCSGCFTSL----ADVFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRP 483 (501)
Q Consensus 408 ~~~l~~~yG~tE~~~~~~~~~----~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~ 483 (501)
++.+++.||+||++.+++... .......+++|+|+++++++|+|.+++.+++.| ++|||+|+|++++.|||++|
T Consensus 370 ~~~l~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g--~~GEl~i~g~~v~~GY~~~p 447 (979)
T 3tsy_A 370 NAKLGQGYGMTEAGPVLAMSLGFAKEPFPVKSGACGTVVRNAEMKIVDPDTGDSLSRN--QPGEICIRGHQIMKGYLNNP 447 (979)
T ss_dssp TCEEEECEECGGGCSEEEECGGGSSSCCCCCTTCCCEECSSCEEEEECTTSCCBCCTT--CCEEEEEESTTSCSEETTCH
T ss_pred CCeEEeeechhhhhHHHHhCCCCCCCccccCCCCcCcccCCcEEEEEeCCCCCCCCCC--CccEEEEECCCccccccCCh
Confidence 899999999999998765432 122345689999999999999994456767665 89999999999999999999
Q ss_pred ccchhhh-ccCcccCCCC
Q 010774 484 DLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 484 ~~~~~~~-~dgw~~TGD~ 500 (501)
+.|++.| .+|||+|||.
T Consensus 448 ~~t~~~f~~~g~~~TGDl 465 (979)
T 3tsy_A 448 AATAETIDKDGWLHTGDI 465 (979)
T ss_dssp HHHHHHBCTTSCEEEEEE
T ss_pred hhhhhhccCCCcEEcCCE
Confidence 9999999 7999999995
No 20
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=3.7e-57 Score=467.25 Aligned_cols=369 Identities=18% Similarity=0.195 Sum_probs=305.0
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEAC 122 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~ 122 (501)
+|+.+.|+++++++|+++|+++. + +++||+||.++++++|++|.+.|+++||+|+++++|++++++++|||
T Consensus 1 m~l~~~l~~~a~~~p~~~A~~~~---~------~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~e~~~~~la~ 71 (512)
T 3fce_A 1 MKLLEQIEKWAAETPDQTAFVWR---D------AKITYKQLKEDSDALAHWISSEYPDDRSPIMVYGHMQPEMIINFLGC 71 (512)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHSTTCCCCEEEEESSCHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCceEEEeC---C------ceEEHHHHHHHHHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 47899999999999999999875 3 58999999999999999999999999999999999999999999999
Q ss_pred HhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeHH
Q 010774 123 NSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSWE 202 (501)
Q Consensus 123 ~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 202 (501)
+++|++++|++|.++.+++.++++.++++++|++....... .. ..++... .+.
T Consensus 72 ~~~G~v~vpl~~~~~~~~l~~il~~~~~~~~i~~~~~~~~~--------~~-~~~~~~~------------------~~~ 124 (512)
T 3fce_A 72 VKAGHAYIPVDLSIPADRVQRIAENSGAKLLLSATAVTVTD--------LP-VRIVSED------------------NLK 124 (512)
T ss_dssp HHTTCCEEEEETTSCHHHHHHHHHHSCCCEEEESSCCCSSC--------CS-SEEEETH------------------HHH
T ss_pred HHhCCEEEeeCCCCcHHHHHHHHHhcCCCEEEecCcccccc--------cc-cceechh------------------hhh
Confidence 99999999999999999999999999999999976432111 00 1111110 111
Q ss_pred HHHhcC--CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 203 EFLQLG--TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 203 ~~~~~~--~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
++.... ..........++++++|+|||||||.||||+++|.++.+.+......+ .+..+|++++.+|++|.++
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 199 (512)
T 3fce_A 125 DIFFTHKGNTPNPEHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDF-----NLQTGQVFLNQAPFSFDLS 199 (512)
T ss_dssp HHHHHTTTCCCCGGGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHT-----TCCSSCEEEECSCTTSGGG
T ss_pred hhcccccccCCCccccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHhHH
Confidence 222111 112223345678999999999999999999999999999998877666 7889999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 281 ~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
+..++.+++.|+++++.+. ++..+++.++++++|++.++|++++.++..
T Consensus 200 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------------------------- 252 (512)
T 3fce_A 200 VMDIYPSLVTGGTLWAIDKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLME--------------------------- 252 (512)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTS---------------------------
T ss_pred HHHHHHHHhCCCEEEECCHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhh---------------------------
Confidence 8888999999999999874 899999999999999999999999887641
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC----
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---- 431 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~---- 431 (501)
......++ +++|.+++||+++++++.+++.+.+ ++.+++.||+||++++++......
T Consensus 253 ----------~~~~~~~~--------~~lr~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 314 (512)
T 3fce_A 253 ----------ASFSESML--------PNMKTFLFCGEVLPNEVARKLIERFPKATIMNTYGPTEATVAVTGIHVTEEVLD 314 (512)
T ss_dssp ----------TTCSTTTS--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEECCHHHHH
T ss_pred ----------ccccchhC--------ccccEEEEecCcCCHHHHHHHHHHCCCCEEEeCcccChhhhheeeEEecccccc
Confidence 11111112 3899999999999999999999998 889999999999998776544322
Q ss_pred CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc----cCcccCCCC
Q 010774 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV----DGWFHTEVH 500 (501)
Q Consensus 432 ~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~----dgw~~TGD~ 500 (501)
.....++|+|+++++++|+| +++.+++.| +.|||+|+||+++.|||++|+.|++.|. +|||+|||.
T Consensus 315 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDl 384 (512)
T 3fce_A 315 QYKSLPVGYCKSDCRLLIMK-EDGTIAPDG--EKGEIVIVGPSVSVGYLGSPELTEKAFTMIDGERAYKTGDA 384 (512)
T ss_dssp HCSSCCCEEECTTCEEEEEC-SSSCBCCTT--SCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEE
T ss_pred ccCCCccccccCCcEEEEEC-CCCCCCCCC--CeEEEEEeccccChhhcCCchhhhhccccCCCCEEEeCCce
Confidence 12347899999999999999 999888776 8999999999999999999999999882 569999995
No 21
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=6.8e-56 Score=465.77 Aligned_cols=363 Identities=17% Similarity=0.148 Sum_probs=301.7
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++.+.|.++++++|+++|+++. + +++||+||.++++++|++|++.|+++||+|+|+++|++++++++|
T Consensus 25 ~~~tl~~~~~~~a~~~Pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vva~l 95 (620)
T 4dg8_A 25 AHPTVVARFSEMAALHPHREAIRDR---F------GSVDYRQLLDSAEQLSDYLLEHYPQPGVCLGVYGEYSRESITCLL 95 (620)
T ss_dssp GSCCHHHHHHHHHHHCTTSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHHCCSSCCEEEEESSSCHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCCeEEEcC---C------CcCcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHH
Confidence 3578999999999999999999875 3 589999999999999999999999999999999999999999999
Q ss_pred HHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEee
Q 010774 121 ACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFS 200 (501)
Q Consensus 121 A~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 200 (501)
||+++|++++|++|.++.+++.++++.++++++++......... ....+ .+.
T Consensus 96 ailkaGa~~vpld~~~p~~~l~~il~~~~~~~vl~~~~~~~~~~--------~~~~~-~~~------------------- 147 (620)
T 4dg8_A 96 AILLSGHHYLYIDLKQPAAWNAELCRQVDCRLILDCSTTPTPAN--------GLPCV-PVR------------------- 147 (620)
T ss_dssp HHHHTTCEEEECCTTSCHHHHHHHHHHHTEEEEEECCSSCCCCT--------TSCEE-EGG-------------------
T ss_pred HHHHhCCEEEeeCccChHHHHHHHHHhCCCcEEEecCccccccc--------CCcee-eec-------------------
Confidence 99999999999999999999999999999999997665432211 01111 110
Q ss_pred HHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 201 WEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
... ............++++++|+|||||||.||||+++|+++.+.+.. ...+ .+..+|++++.+|++|..+
T Consensus 148 --~~~-~~~~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~-----~~~~~d~~l~~~p~~~~~~ 218 (620)
T 4dg8_A 148 --HLP-AAPASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFL-----AFAPQMRFLVNSPLSFDAA 218 (620)
T ss_dssp --GCC-CCCCCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGG-----TTCTTCEEEECSCTTSTHH
T ss_pred --cCC-cCCccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhh-----CCCCCCEEEEECccCHHHH
Confidence 000 001112223346799999999999999999999999999887765 3333 6789999999999999999
Q ss_pred HHHHHHHHhcCcEEEEec---CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 281 QIIETHCIHKGCSIGFWR---GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 281 ~~~~~~~l~~G~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
+..++.+|+.|+++++.+ .++..+++.++++++|+++++|++++.+++..
T Consensus 219 ~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~--------------------------- 271 (620)
T 4dg8_A 219 TLEIWGALLNGGCCVLNDLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLD--------------------------- 271 (620)
T ss_dssp HHHHHHHHTTTCEEEECCSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC---------------------------
T ss_pred HHHHHHHHhcCCEEEeCccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcC---------------------------
Confidence 888999999999999864 28999999999999999999999999887520
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC---Cc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---FN 433 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~---~~ 433 (501)
+ .++ ++||.+++||++++++..+++.+.+ +++++|.||+||++.+++...... ..
T Consensus 272 ---------~----~~l--------~~lr~v~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 330 (620)
T 4dg8_A 272 ---------P----DCL--------GGLRQLLTGGDILSVPHVRRALLRHPRLHLVNGYGPTENTTFTCCHVVTDDDLEE 330 (620)
T ss_dssp ---------G----GGG--------TTCSEEEEESSCCCHHHHHHHHHHCTTCEEEEEECCGGGCSCSEEEECCTGGGGS
T ss_pred ---------h----hhC--------CCccEEEEEeCcCCHHHHHHHHHhCCCeEEEeeEchhhhhhheEEEeccccccCC
Confidence 0 011 3899999999999999888887765 889999999999998766543322 23
Q ss_pred ccCcccccccCeEEEEeecCCCCc-cCCCCCCCceEEEecCCccccccCCcccchhhhcc--------CcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGY-DALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVD--------GWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~-~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~d--------gw~~TGD~ 500 (501)
...++|+|++|++++|+| +++.+ ++.| ++|||||+|++++.||||+|+.|++.|.+ +||+|||.
T Consensus 331 ~~~~iG~p~~~~~~~i~d-~~~~~~~~~g--~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl 403 (620)
T 4dg8_A 331 DDIPIGKAIAGTAVLLLD-EHGQEIAEPD--RAGEIVAFGAGLAQGYRNDAARTRASFVELPYRGRLLRAYRTGDR 403 (620)
T ss_dssp SSCCCBEECTTEEEEEEC-TTSCBCCSSS--CCEEEEEEETTCCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEE
T ss_pred CCCCceecccCcEEEEEC-ccCCCCCCCC--CceEEEEeccccccccCCChhhhhhhhccCCCCCCCceEEeCCCE
Confidence 457899999999999999 88876 4554 89999999999999999999999999932 79999995
No 22
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=2.5e-56 Score=460.78 Aligned_cols=368 Identities=18% Similarity=0.241 Sum_probs=309.4
Q ss_pred CCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhC-CCCCCCEEEEEcCCchhHHHHHHH
Q 010774 43 ESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSR-GVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 43 ~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~-gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+|+.+.|+++++++|+++|+++. + +++||+||.++++++|++|.+. |.++||+|+++++|++++++++||
T Consensus 1 m~l~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~~A~~L~~~~~~~~g~~V~i~~~n~~~~~~~~lA 71 (511)
T 3e7w_A 1 MKLLHAIQTHAETYPQTDAFRSQ----G-----QSLTYQELWEQSDRAAAAIQKRISGEKKSPILVYGHMEPHMIVSFLG 71 (511)
T ss_dssp CCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHTTTSCSSSCCCEEEEESSCHHHHHHHHH
T ss_pred CcHHHHHHHHHHHCCCCeEEEcC----C-----ceeeHHHHHHHHHHHHHHHHHhcCCCCCCeEEEEecCCHHHHHHHHH
Confidence 37899999999999999999874 3 6899999999999999999885 888999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.++++++|++......... . ......+
T Consensus 72 ~~~~G~~~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~------~----------------------~~~~~~~ 123 (511)
T 3e7w_A 72 SVKAGHPYIPVDLSIPSERIAKIIESSGAELLIHAAGLSIDAVG------Q----------------------QIQTVSA 123 (511)
T ss_dssp HHHHTCCEEEEETTSCHHHHHHHHHHHTCCEEEESSSCCTTCCC------C----------------------SSCEEEH
T ss_pred HHHhCCEEEecCCCChHHHHHHHHHhCCCCEEEecccccchhcc------c----------------------ccceecH
Confidence 99999999999999999999999999999999997653321100 0 0113345
Q ss_pred HHHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHH
Q 010774 202 EEFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYD 280 (501)
Q Consensus 202 ~~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g 280 (501)
+++.... ..........++++++|+|||||||.||||++||.++.+.+..+...+ .+..+|++++.+|++|.++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~ 198 (511)
T 3e7w_A 124 EELLENEGGSVSQDQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADF-----PVSGGKIFLNQAPFSFDLS 198 (511)
T ss_dssp HHHHTSCSCCCCGGGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHS-----TTTTTCEEEECSCTTSTHH
T ss_pred hhhhccccCCccccccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhc-----CCCccceEEEeCCccHHHH
Confidence 5555433 112222334678999999999999999999999999999998877666 7889999999999999999
Q ss_pred HHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 281 QIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 281 ~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
+..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++.
T Consensus 199 ~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~--------------------------- 251 (511)
T 3e7w_A 199 VMDLYPCLQSGGTLHCVTKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMD--------------------------- 251 (511)
T ss_dssp HHHHHHHHHTTCEEEECCHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTS---------------------------
T ss_pred HHHHHHHHhcCCEEEEcChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhc---------------------------
Confidence 8888999999999998764 899999999999999999999999988741
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC----
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---- 431 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~---- 431 (501)
+.....++ +++|.+++||+++++++.+++.+.+ ++.+++.||+||++++++......
T Consensus 252 ----------~~~~~~~~--------~~l~~~~~~G~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~ 313 (511)
T 3e7w_A 252 ----------PGFSQDLL--------PHADTFMFCGEVLPVSVAKALLERFPKAKIFNTYGPTEATVAVTSVEITNDVIS 313 (511)
T ss_dssp ----------TTCSTTTC--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEECCCCGGGSSCSEEEEECHHHHT
T ss_pred ----------cccccccC--------CcccEEEEecCCCCHHHHHHHHHHCCCcEEEeCcccchheeeeeEEeccccccc
Confidence 11111112 3899999999999999999999998 889999999999988766543222
Q ss_pred CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh--ccC--cccCCCC
Q 010774 432 FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI--VDG--WFHTEVH 500 (501)
Q Consensus 432 ~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~--~dg--w~~TGD~ 500 (501)
.....++|+|+|+++++|+| +++++++.| +.|||+|+|++++.|||++|+.|++.| .+| ||+|||.
T Consensus 314 ~~~~~~~G~~~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~g~~~~~TGDl 383 (511)
T 3e7w_A 314 RSESLPVGFAKPDMNIFIMD-EEGQPLPEG--EKGEIVIAGPSVSRGYLGEPELTEKAFFSHEGQWAYRTGDA 383 (511)
T ss_dssp TCSSCCCBEECTTCEEEEEC-TTSCBCCTT--CCEEEEEESTTSCCCBTTCHHHHHHHEEESSSSEEEEEEEE
T ss_pred cCCcCCCcceeCCCEEEEEC-CCCCCCCCC--CceEEEEecCccChhhCCCcccchhhhcCCCCCEEEeCCCe
Confidence 22346799999999999999 889888776 999999999999999999999999998 344 8999995
No 23
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=6.3e-56 Score=467.59 Aligned_cols=384 Identities=16% Similarity=0.208 Sum_probs=317.3
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|.++++ |+++|+++. + +++||+||.++++++|++|++.|+++||+|+++++|++++++++||
T Consensus 26 ~~~l~~~~~~~a~--pd~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~gd~V~l~~~~s~~~vva~lA 94 (617)
T 3rg2_A 26 DLPLTDILTRHAA--SDSIAVIDG---E------RQLSYRELNQAADNLACSLRRQGIKPGETALVQLGNVAELYITFFA 94 (617)
T ss_dssp CCCTTHHHHTTTT--CCSEEEEET---T------EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred cCCHHHHHHHhhC--CCCeEEecC---C------ceEeHHHHHHHHHHHHHHHHHcCCCCCCEEEEECCCcHHHHHHHHH
Confidence 4789999999988 999999875 3 6899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh----hhhhcCccCCCCccEEEEecCCChhhHHHhhhcCce
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP----SILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVS 197 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 197 (501)
|+++|++++|++|.++.+++.++++.+++++++++..... ............+..+........
T Consensus 95 ~l~aG~~~vpl~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 162 (617)
T 3rg2_A 95 LLKLGVAPVLALFSHQRSELNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE------------ 162 (617)
T ss_dssp HHHHTCEEEEECTTCCHHHHHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCST------------
T ss_pred HHhcCeEEccCCccccHHHHHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccc------------
Confidence 9999999999999999999999999999999999987541 111111111233444444433221
Q ss_pred EeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHH
Q 010774 198 CFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAH 277 (501)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~ 277 (501)
..+.+............+..++++++|+|||||||.||||+++|+++.+.+......+ .+..+|++++.+|++|
T Consensus 163 -~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~-----~~~~~~~~l~~~p~~~ 236 (617)
T 3rg2_A 163 -HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEIC-----QFTQQTRYLCAIPAAH 236 (617)
T ss_dssp -TBHHHHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECSCTTS
T ss_pred -cchhhhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhc-----CCCCcceEEEeccchh
Confidence 1234444433223334455678999999999999999999999999999998877766 7889999999999999
Q ss_pred HHHHHH--HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 278 IYDQII--ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 278 ~~g~~~--~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.+++.. ++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+++........
T Consensus 237 ~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~------------------ 298 (617)
T 3rg2_A 237 NYAMSSPGSLGVFLAGGTVVLAADPSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESR------------------ 298 (617)
T ss_dssp HHHHHSSHHHHHHHHTCEEEECSSCCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCT------------------
T ss_pred hhhhhHHHHHHHHHcCCEEEEeCCCCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhccccc------------------
Confidence 998874 7889999999999875 8999999999999999999999999988754221100
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcc
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNM 434 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~ 434 (501)
.++ ++||.+++||+++++++.+++.+.+++++++.||+||++..++.........
T Consensus 299 -----------------~~l--------~~lr~i~~gGe~l~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~ 353 (617)
T 3rg2_A 299 -----------------AQL--------ASLKLLQVGGARLSATLAARIPAEIGCQLQQVFGMAEGLVNYTRLDDSAEKI 353 (617)
T ss_dssp -----------------TTT--------TTCCEEEEESSCCCHHHHHHHHHHTCSEEEEEEEETTEEEEECCTTSCHHHH
T ss_pred -----------------ccC--------CCccEEEEcCCcCCHHHHHHHHHHhCCcEEEEeccCcceeecccCCCccccc
Confidence 011 3899999999999999999999999999999999999886555433222233
Q ss_pred cCcccccc-cCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 435 IGTVGVPM-TTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 435 ~~s~G~p~-p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
..++|+|+ ++++++|+| +++++++.| ++|||||+|++++.|||++|+.|++.| .+|||+|||.
T Consensus 354 ~~~~G~p~~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GY~~~p~~t~~~f~~~~~yrTGDl 418 (617)
T 3rg2_A 354 IHTQGYPMCPDDEVWVAD-AEGNPLPQG--EVGRLMTRGPYTFRGYYKSPQHNASAFDANGFYCSGDL 418 (617)
T ss_dssp HHCCCEESCTTCEEEEEC-TTSCBCCTT--CCEEEEEECSSSCSCCTTCHHHHHHHBCTTSCEEEEEE
T ss_pred ccCCCccCCCCceEEEEC-CCCCCCCCC--CceEEEecCccccchhcCChhhhhhccCCCCceecCce
Confidence 46789997 889999999 999888877 999999999999999999999999999 8999999995
No 24
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=4.4e-56 Score=460.42 Aligned_cols=369 Identities=16% Similarity=0.138 Sum_probs=304.4
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
+.++.+.|+++++++|+++|+.+. + +++||+||.++++++|++|.++|+++||+|+++++|++++++++||
T Consensus 3 ~~~l~~~l~~~a~~~p~~~a~~~~----~-----~~~Ty~el~~~~~~lA~~L~~~g~~~gd~V~i~~~n~~~~~~~~lA 73 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQADFPVYDCL----G-----ERRTYGQLKRDSDSIAAFIDSLALLAKSPVLVFGAQTYDMLATFVA 73 (521)
T ss_dssp CCCHHHHHHHHHHHSTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTCCCTTCCEEEEECSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCCcceecC----C-----CeecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 478999999999999999999875 3 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.++++++|++.+....+. .. . ...+
T Consensus 74 ~~~~G~v~vpl~~~~~~~~l~~il~~~~~~~ii~~~~~~~~~~--------~~-~---------------------~~~~ 123 (521)
T 3l8c_A 74 LTKSGHAYIPVDVHSAPERILAIIEIAKPSLIIAIEEFPLTIE--------GI-S---------------------LVSL 123 (521)
T ss_dssp HHHTTCCEEEEETTSCHHHHHHHHHHSCCSEEEESSCCCSCCT--------TS-E---------------------EEEH
T ss_pred HHHhCCEEEecCccccHHHHHHHHHhCCCCEEEecCccccccc--------cC-c---------------------ccch
Confidence 9999999999999999999999999999999999876543221 00 1 1122
Q ss_pred HHHHh---cCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHH
Q 010774 202 EEFLQ---LGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 202 ~~~~~---~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
.++.. ............++++++|+|||||||.||||++||+++++....+.... ......++++++..|++|.
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~~~~~~l~~~~~~~~ 200 (521)
T 3l8c_A 124 SEIESAKLAEMPYERTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDA---AFDVPKQPQMLAQPPYSFD 200 (521)
T ss_dssp HHHHHHHHHTCCCCCSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCT---TTCCCSSCEEECCSCTTSG
T ss_pred hhhhhcccccCCcccCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhcc---ccCCCCCCeEEecCCccHH
Confidence 22221 11112223445679999999999999999999999999998877654431 1267788999999999999
Q ss_pred HHHHHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhh
Q 010774 279 YDQIIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLG 354 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 354 (501)
.++..++.++..|+++++.+. ++..+++.+.++++|++.++|+++..++..
T Consensus 201 ~~~~~~~~~l~~G~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------------------------- 255 (521)
T 3l8c_A 201 LSVMYWAPTLALGGTLFALPKELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLS------------------------- 255 (521)
T ss_dssp GGHHHHHHHHHTTCEEEECCGGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTS-------------------------
T ss_pred HHHHHHHHHHhcCCEEEEcCHHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhh-------------------------
Confidence 888788899999999998764 889999999999999999999999887641
Q ss_pred hhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC--
Q 010774 355 NMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV-- 431 (501)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~-- 431 (501)
......++ +++|.+++||+++++++.+++.+.+ ++.+++.||+||++++++......
T Consensus 256 ------------~~~~~~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~i~~~YG~TE~~~~~~~~~~~~~~ 315 (521)
T 3l8c_A 256 ------------DDFCQAKM--------PALTHFYFDGEELTVSTARKLFERFPSAKIINAYGPTEATVALSAIEITREM 315 (521)
T ss_dssp ------------TTCSTTTC--------TTCCEEEECSSCCCHHHHHHHHHHCTTCEEEEEECCGGGSSCSEEEEECHHH
T ss_pred ------------hccccccC--------ccceEEEEecccCCHHHHHHHHHHCCCceEEeCcCccHHhhhhceeeccccc
Confidence 11111112 3899999999999999999999988 899999999999988766543222
Q ss_pred --CcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh----ccCcccCCCC
Q 010774 432 --FNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI----VDGWFHTEVH 500 (501)
Q Consensus 432 --~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~----~dgw~~TGD~ 500 (501)
....+++|+|+|+++++|+| +++.+++.| +.|||+|+||+++.|||++|+.|++.| .+|||+|||.
T Consensus 316 ~~~~~~~~vG~p~~~~~~~i~d-~~g~~~~~g--~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~TGDl 387 (521)
T 3l8c_A 316 VDNYTRLPIGYPKPDSPTYIID-EDGKELSSG--EQGEIIVTGPAVSKGYLNNPEKTAEAFFTFKGQPAYHTGDI 387 (521)
T ss_dssp HHHCSSCEEEEECTTSCEEEEC-TTSCBCCTT--CCEEEEEESTTSCSCBTTCHHHHHHHEEEETTEEEEEEEEE
T ss_pred ccCCCccccccccCCCEEEEEC-CCcCCCCCC--CceEEEecccccChhhcCCchHhhccCcCCCCceeeeCCCE
Confidence 12347899999999999999 999888776 899999999999999999999999988 3679999995
No 25
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=3.6e-55 Score=456.37 Aligned_cols=364 Identities=19% Similarity=0.281 Sum_probs=299.0
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.++|.++++++|+++|+++. + +.+||+||.++++++|++|.++|+++||+|+++++|++++++++||
T Consensus 38 ~~~l~~~l~~~a~~~p~~~Al~~~----~-----~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~n~~e~~~~~lA 108 (563)
T 1amu_A 38 DKTIHQLFEEQVSKRPNNVAIVCE----N-----EQLTYHELNVKANQLARIFIEKGIGKDTLVGIMMEKSIDLFIGILA 108 (563)
T ss_dssp TCCHHHHHHHHHHHCTTSEEEEET----T-----EEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHCCCCeEEEeC----C-----ceecHHHHHHHHHHHHHHHHHcCCCCCCEEEEEeCCCHHHHHHHHH
Confidence 468999999999999999999864 3 5899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.++++++|++.+....+.... ....+..+.....
T Consensus 109 ~~~~Gav~vpl~~~~~~~~l~~il~~~~~~~li~~~~~~~~~~~~~-----~~~~~~~~~~~~~---------------- 167 (563)
T 1amu_A 109 VLKAGGAYVPIDIEYPKERIQYILDDSQARMLLTQKHLVHLIHNIQ-----FNGQVEIFEEDTI---------------- 167 (563)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECGGGHHHHTTSC-----CCSEEEECCCSTT----------------
T ss_pred HHHhCCEEEEeCCCCcHHHHHHHHHhcCCCEEEEcCchhhhhhhcc-----ccCceeeecchhh----------------
Confidence 9999999999999999999999999999999999876554432211 1112222221100
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
.............++++++|+|||||||.||||++||+++.+.+..+...+ ++..+|++++.+|++|..++
T Consensus 168 ----~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~~~ 238 (563)
T 1amu_A 168 ----KIREGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSL-----NVTEKDRIGQFASISFDASV 238 (563)
T ss_dssp ----TTSCCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTS-----CCCTTCEEEECSCTTSTHHH
T ss_pred ----ccccCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhc-----CCCCCCEEEEeCCccHHHHH
Confidence 000111112334578999999999999999999999999998887766655 77899999999999999998
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+++.|+++++.+. ++..+++.++++++|+++++|+++..+...
T Consensus 239 ~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~---------------------------- 290 (563)
T 1amu_A 239 WEMFMALLTGASLYIILKDTINDFVKFEQYINQKEITVITLPPTYVVHLDPE---------------------------- 290 (563)
T ss_dssp HHHHHHHTTTCEEEECCHHHHTCHHHHHHHHHHTTCCEEEECHHHHTTSCTT----------------------------
T ss_pred HHHHHHHHCCCEEEEcChHhhcCHHHHHHHHHHcCCcEEEeCHHHHHHHHhc----------------------------
Confidence 878899999999998763 889999999999999999999998765320
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCC--Cccc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADV--FNMI 435 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~--~~~~ 435 (501)
++ +++|.+++||+++++++.++|.+ .+.+++.||+||++.+++...... ....
T Consensus 291 ---------------~~--------~~lr~~~~gG~~l~~~~~~~~~~--~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~ 345 (563)
T 1amu_A 291 ---------------RI--------LSIQTLITAGSATSPSLVNKWKE--KVTYINAYGPTETTICATTWVATKETIGHS 345 (563)
T ss_dssp ---------------TC--------CSCSEEEEESSCCCHHHHHHHTT--TSEEEEEECCGGGSSCSEEEECCSSCCCSS
T ss_pred ---------------cc--------ccccEEEEEEecCCHHHHHHHHh--CCeEEEEECcCHHhHhheeeecccccCCCC
Confidence 01 38999999999999999999987 478999999999988766543322 2345
Q ss_pred CcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhc-------cCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIV-------DGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~-------dgw~~TGD~ 500 (501)
.++|+|+|+++++|+| +++++++.| +.|||||+|++++.|||++|+.|++.|. +|||+|||.
T Consensus 346 ~~vG~p~~~~~v~i~d-~~~~~~~~g--~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~g~~w~~TGDl 414 (563)
T 1amu_A 346 VPIGAPIQNTQIYIVD-ENLQLKSVG--EAGELCIGGEGLARGYWKRPELTSQKFVDNPFVPGEKLYKTGDQ 414 (563)
T ss_dssp CCCBEECTTEEEEEEC-TTSCBCCTT--CEEEEEEEETTCCCEETTCHHHHHHHEEECSSSTTSEEEEEEEE
T ss_pred CcccceeCCCEEEEEC-CCcCCCCCC--CcEEEEEechhhChhhCCCchhhhhhcccCCCCCCCEEEecCCE
Confidence 7899999999999999 888887776 8999999999999999999999999883 359999995
No 26
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=4.2e-55 Score=459.07 Aligned_cols=388 Identities=19% Similarity=0.216 Sum_probs=312.5
Q ss_pred CCCCCCCCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch
Q 010774 34 GLLESPAGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP 113 (501)
Q Consensus 34 ~~~~~~~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~ 113 (501)
.++...+...|+.++|+++++.+|+.+++. ...+..+++||+||.++++++|++|+++|+++||+|+++++|++
T Consensus 12 ~~~~~~~~~~tl~~~l~~~a~~~p~~~~~~------~~~~~~~~~Ty~eL~~~~~~lA~~L~~~Gv~~gd~V~i~~~~~~ 85 (576)
T 3gqw_A 12 SLPMRYADFPTLVDALDYAALSSAGMNFYD------RRCQLEDQLEYQTLKARAEAGAKRLLSLNLKKGDRVALIAETSS 85 (576)
T ss_dssp --CCCCSCCSSHHHHHHHHTTSSCEEEEEC------TTSCEEEEEEHHHHHHHHHHHHHHHHHTCCCTTCEEEEECCSSH
T ss_pred CCCcccCCCCcHHHHHHHHhhCCCCeEEeC------CCCCceeEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCcH
Confidence 344444677899999999999999977773 22233378999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHhcCCEEEEecCCCC-------HHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChh
Q 010774 114 EWIIAMEACNSQAITYVPLYDTLG-------ANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSS 186 (501)
Q Consensus 114 ~~~~~~lA~~~~G~~~v~l~~~~~-------~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 186 (501)
++++++|||+++|++++|+++.++ .+++.++++.++++++|++.+....+....... ... .
T Consensus 86 ~~~~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~-~~~-~---------- 153 (576)
T 3gqw_A 86 EFVEAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDN-PEL-H---------- 153 (576)
T ss_dssp HHHHHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGC-TTC-E----------
T ss_pred HHHHHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccC-Ccc-e----------
Confidence 999999999999999999999998 799999999999999999987666553332211 111 1
Q ss_pred hHHHhhhcCceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhccee-eeeccccCCC
Q 010774 187 QKKEAEELGVSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQM-FVVTGKVCSE 265 (501)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~-~~~~~~~~~~ 265 (501)
.....................++++++|+|||||||.||||+++|+++++.+..+... + .+..
T Consensus 154 -----------~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~-----~~~~ 217 (576)
T 3gqw_A 154 -----------VLSHAWFKALPEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGI-----KLRP 217 (576)
T ss_dssp -----------EEEHHHHHTSCCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTS-----CCCT
T ss_pred -----------ecchhhhhcccccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhccc-----CCCC
Confidence 1111111111122223344567899999999999999999999999999888775433 3 7789
Q ss_pred CcEEEEecChHHHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCCh
Q 010774 266 EDTYFSFLPLAHIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGA 339 (501)
Q Consensus 266 ~d~~l~~~pl~~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~ 339 (501)
+|++++.+|++|.+|+.. ++.++..|+++++.+. ++..+++.++++++|+++++|.+++.+.+.+.
T Consensus 218 ~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~-------- 289 (576)
T 3gqw_A 218 GDRCVSWLPFYHDMGLVGFLLTPVATQLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVN-------- 289 (576)
T ss_dssp TCCEEECCCTTSHHHHHHHTHHHHHTTCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCC--------
T ss_pred cceEEEcCCccccccHHHHHHHHHhcCceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhc--------
Confidence 999999999999999885 6788999999988763 88999999999999999999999988765221
Q ss_pred hHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh------CCCeee
Q 010774 340 LSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS------GAPLTQ 413 (501)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~------~~~l~~ 413 (501)
.......++ +++|.+++||+++++++.++|.+.+ +..+++
T Consensus 290 --------------------------~~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 335 (576)
T 3gqw_A 290 --------------------------EKDLAELDL--------SCWRVAGIGAEPISAEQLHQFAECFRQVNFDNKTFMP 335 (576)
T ss_dssp --------------------------HHHHTTCCC--------TTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEE
T ss_pred --------------------------ccccccCCh--------hhhHhhhccCccCCHHHHHHHHHHHhhcCCCcccccc
Confidence 111111222 3899999999999999999999987 678999
Q ss_pred eecccccCcceecccCCCC---------------------------cccCcccccccCeEEEEeecCCCCccCCCCCCCc
Q 010774 414 GYGLTESCSGCFTSLADVF---------------------------NMIGTVGVPMTTVEARLESVPEMGYDALSSVPRG 466 (501)
Q Consensus 414 ~yG~tE~~~~~~~~~~~~~---------------------------~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~G 466 (501)
.||+||++.+++....... ....++|+|+|+++++|+| +++++++.| ++|
T Consensus 336 ~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d-~~g~~~~~g--~~G 412 (576)
T 3gqw_A 336 CYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRN-EAGMPVAER--VVG 412 (576)
T ss_dssp EEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEEC-TTSCBCCTT--BCE
T ss_pred cCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEEC-CCCCCCCCC--CeE
Confidence 9999999988775432210 0123799999999999999 999888776 899
Q ss_pred eEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 467 EICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 467 ei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
||+|+|++++.|||++++.+++.+.+|||+|||.
T Consensus 413 El~v~g~~~~~gY~~~~~~~~~~~~~g~~~TGDl 446 (576)
T 3gqw_A 413 HICISGPSLMSGYFGDQVSQDEIAATGWLDTGDL 446 (576)
T ss_dssp EEEEESTTSCCCBTTCHHHHHHHHHHSCEEEEEE
T ss_pred EEEEeCccccccccCCccccccccCCCeeeccce
Confidence 9999999999999999998888779999999995
No 27
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=1.3e-55 Score=464.11 Aligned_cols=385 Identities=18% Similarity=0.216 Sum_probs=308.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAM 119 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~ 119 (501)
....|+.++|.++++.+|+++|+++. ++ +..+++||+||.++++++|++|+++|+++||+|+++++|++++++++
T Consensus 8 ~~~~tl~~~l~~~a~~~p~~~a~~~~---~~--~~~~~~Ty~eL~~~~~~lA~~L~~~gv~~gd~V~i~~~~~~~~~~~~ 82 (590)
T 3kxw_A 8 LQCQSLVDVVRLRALHSPNKKSCTFL---NK--ELEETMTYEQLDQHAKAIAATLQAEGAKPGDRVLLLFAPGLPLIQAF 82 (590)
T ss_dssp HTCSSHHHHHHHHHHHCTTSEEEEEE---ET--TEEEEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEEECCSSHHHHHHH
T ss_pred cCcccHHHHHHHHHHhCCCCeEEEEE---cC--CeeEEEcHHHHHHHHHHHHHHHHHcCCCCCCEEEEEcCCchhHHHHH
Confidence 34578999999999999999999986 42 22378999999999999999999999999999999999999999999
Q ss_pred HHHHhcCCEEEEecCCC---CHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCc
Q 010774 120 EACNSQAITYVPLYDTL---GANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGV 196 (501)
Q Consensus 120 lA~~~~G~~~v~l~~~~---~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 196 (501)
|||+++|++++|++|.+ +.+++.++++.+++++++++.+....+.............+.
T Consensus 83 lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~------------------ 144 (590)
T 3kxw_A 83 LGCLYAGCIAVPIYPPAQEKLLDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIP------------------ 144 (590)
T ss_dssp HHHHHTTCEEEEECCCCSHHHHHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEE------------------
T ss_pred HHHHHhCcEEEEecCCCchHHHHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccc------------------
Confidence 99999999999999988 457899999999999999987665544322111111111111
Q ss_pred eEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChH
Q 010774 197 SCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLA 276 (501)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~ 276 (501)
+...+++..............++++++|+|||||||.||||++||+++++.+......+ ++..+|++++.+|++
T Consensus 145 -~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~ 218 (590)
T 3kxw_A 145 -AIALESIELNRSSSWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSF-----HMNDETIIFSWLPPH 218 (590)
T ss_dssp -EEEGGGCCGGGGGGCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTT
T ss_pred -eeechhccccccccCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhh-----CCCCcCeEEEecCCC
Confidence 11111111111112233455678999999999999999999999999999998877766 788999999999999
Q ss_pred HHHHHHH-HHHHHhcCcEEEEecC-----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHH
Q 010774 277 HIYDQII-ETHCIHKGCSIGFWRG-----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (501)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~~~~~~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
|.+|+.. ++.+++.|+++++.+. ++..+++.++++++|++.++|.+++.+++.+..
T Consensus 219 h~~g~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~------------------ 280 (590)
T 3kxw_A 219 HDMGLIGCILTPIYGGIQAIMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIRE------------------ 280 (590)
T ss_dssp SHHHHHTTTHHHHHHTCEEEECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCG------------------
T ss_pred cchhhHHHHHHHHhcCceEEEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhh------------------
Confidence 9999986 8899999999999764 789999999999999999999999988763211
Q ss_pred HHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhC------CCeeeeecccccCcce
Q 010774 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSG------APLTQGYGLTESCSGC 424 (501)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~------~~l~~~yG~tE~~~~~ 424 (501)
......++ ++||.+++||+++++++.++|.+.++ ..+++.||+||+++++
T Consensus 281 ----------------~~~~~~~l--------~~lr~~~~gg~~l~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~ 336 (590)
T 3kxw_A 281 ----------------EKKEGLDL--------SSWVTAFNGAEPVREETMEHFYQAFKEFGFRKEAFYPCYGLAEATLLV 336 (590)
T ss_dssp ----------------GGGTTCCC--------TTCCEEEECSSCCCHHHHHHHHHHHGGGTCCGGGEEEEEECGGGSSEE
T ss_pred ----------------hhccCCCc--------hhhHHHhhCCCCCCHHHHHHHHHHHHHcCCCcccccccccccccccee
Confidence 11111222 38999999999999999999999873 4699999999999887
Q ss_pred ecccCC--------------------------CCcccCcccccccCeEEEEeecCC-CCccCCCCCCCceEEEecCCccc
Q 010774 425 FTSLAD--------------------------VFNMIGTVGVPMTTVEARLESVPE-MGYDALSSVPRGEICLRGNTLFS 477 (501)
Q Consensus 425 ~~~~~~--------------------------~~~~~~s~G~p~p~~~i~I~d~~~-~~~~~~~~~~~Gei~v~g~~v~~ 477 (501)
+..... .....+++|+|+++ ++|+| ++ +.+++.| ++|||+|+||+++.
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d-~~~~~~~~~g--~~GEl~v~g~~v~~ 411 (590)
T 3kxw_A 337 TGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIID-PDTLIPCDFD--QVGEIWVQSNSVAK 411 (590)
T ss_dssp EECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEEC-TTTCCBCCTT--BCEEEEEESTTSCC
T ss_pred ecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEc-CCCCcCCCCC--CEEEEEEeCCcccc
Confidence 754321 11234789999998 88899 65 6666655 89999999999999
Q ss_pred cccCCcccchhhhcc-------C--cccCCCC
Q 010774 478 GYYKRPDLTEEVIVD-------G--WFHTEVH 500 (501)
Q Consensus 478 gY~~~~~~~~~~~~d-------g--w~~TGD~ 500 (501)
|||++|+.|++.|.+ | ||+|||.
T Consensus 412 GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDl 443 (590)
T 3kxw_A 412 GYWNQPEETRHAFAGKIKDDERSAIYLRTGDL 443 (590)
T ss_dssp CBTTCHHHHHHHHCBCCTTC---CCBEEEEEE
T ss_pred cccCChhHHHHHHhccccCCCCCCcEEecCcE
Confidence 999999999999842 5 9999995
No 28
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=1e-54 Score=454.19 Aligned_cols=384 Identities=17% Similarity=0.151 Sum_probs=304.1
Q ss_pred CCCCCHHHHHHHHHHhCCCCcceEEeeccCC----CCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH
Q 010774 40 AGLESPWQFFCDSAKRIPNNQMLGGRKVSDG----KVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~~~al~~~~~~~~----~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~ 115 (501)
.+..|+.++|+++++++|+++|+++. ++ .....+++||+||.++++++|++|.+.|+ +||+|+++++|++++
T Consensus 17 ~~~~tl~~~l~~~a~~~p~~~A~~~~---~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~g~-~gd~V~i~~~n~~~~ 92 (562)
T 3ite_A 17 TSTVPPSHYIETWAKTHPEWKAVEVA---TGFLGSQKIVTEDWTYKKLNETANQVANLIIHASL-HGRAIAVSLDRSLIA 92 (562)
T ss_dssp -CCCCTTHHHHHHHHHCTTSEEEEEE---ECC-----CEEEEEEHHHHHHHHHHHHHHHHHTTC-SSCEEEEECCSCHHH
T ss_pred cccCCHHHHHHHHHHHCCCchhhhcc---cccccccccccCCCCHHHHHHHHHHHHHHHHhcCC-CCCEEEEEeCCCHHH
Confidence 45678999999999999999999876 32 12234789999999999999999999999 799999999999999
Q ss_pred HHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcC
Q 010774 116 IIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELG 195 (501)
Q Consensus 116 ~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 195 (501)
++++|||+++|++++|++|.++.+++.++++.++++++|++++...... ......++....
T Consensus 93 ~~~~lA~~~~Gav~vpl~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~~------------- 153 (562)
T 3ite_A 93 FAIIVGIMKSGNTYVPIEAGLPNDRKSFLLRDSRAAMAFVCDNNFDGVE------LPPETKVLDTKN------------- 153 (562)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHHHHHHHHHHHTCSEEEECTTTTTTCC------CCTTCEEEETTC-------------
T ss_pred HHHHHHHHHhCCEEEecCCcCHHHHHHHHHHhcCCCEEEEccccccccc------cCccceeecccc-------------
Confidence 9999999999999999999999999999999999999999876544321 011112222111
Q ss_pred ceEeeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeee---eccccCCCCcEEEEe
Q 010774 196 VSCFSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFV---VTGKVCSEEDTYFSF 272 (501)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~---~~~~~~~~~d~~l~~ 272 (501)
..+.+.+.............++++++|+|||||||.||||+++|+++.+....+...+. .....+...+++++.
T Consensus 154 ---~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (562)
T 3ite_A 154 ---QSFIENLSTQDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCL 230 (562)
T ss_dssp ---HHHHHHHHHSCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECC
T ss_pred ---hhhhhhcccccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEe
Confidence 11222333222222233445788899999999999999999999999988766543221 112256788999999
Q ss_pred cChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHH
Q 010774 273 LPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYN 350 (501)
Q Consensus 273 ~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 350 (501)
.|++|..++..++.++..|+++++.+. .+..+++.++++++|+++++|++++.+..
T Consensus 231 ~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~l~~~~~---------------------- 288 (562)
T 3ite_A 231 ASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELGVTHAGIVPSLLDQTGL---------------------- 288 (562)
T ss_dssp SCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTTCCEEEECHHHHHHHTC----------------------
T ss_pred cCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcCCCEEEcCHHHHhhccc----------------------
Confidence 999998888778889999999998764 46788899999999999999998876531
Q ss_pred HHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC
Q 010774 351 YKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD 430 (501)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~ 430 (501)
.+ .++ ++||.+++||+++++++.++|++.+++.+++.||+||++.+++.....
T Consensus 289 ---------------~~----~~~--------~~lr~~~~gG~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~ 341 (562)
T 3ite_A 289 ---------------VP----EDA--------PHLVYLGVGGEKMTPRTQQIWSSSDRVALVNVYGPTEVTIGCSAGRIL 341 (562)
T ss_dssp ---------------CG----GGS--------TTCCEEEEESSCCCHHHHHHHTTCSSCEEEEEECCGGGCSCSEEEECC
T ss_pred ---------------Cc----ccc--------CceEEEEEecCCCCHHHHHHHhhCCCcEEEEeeccchheeeeeeeeec
Confidence 00 011 389999999999999999999998899999999999999877766555
Q ss_pred CCcccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccC--cccCCCC
Q 010774 431 VFNMIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDG--WFHTEVH 500 (501)
Q Consensus 431 ~~~~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dg--w~~TGD~ 500 (501)
.....+++|+|+++++++|+|.+++.+++.| +.|||+|+|++++.|||++|+.++..+.+| ||+|||.
T Consensus 342 ~~~~~~~~G~p~~~~~~~i~d~~~~~~~~~g--~~GEl~v~g~~v~~GY~~~p~~t~~~~~~g~~w~~TGDl 411 (562)
T 3ite_A 342 PDSDTRCIGHPLGDSVAHVLAPGSNEHVKKG--MAGELVIEGSLVANGYLNRPDAKGFCDINGRKMYRTGDI 411 (562)
T ss_dssp TTSCTTEEEEECTTCEEEEECTTSSCBCCTT--SCEEEEEESTTSCCEESSCTTCCSEEEETTEEEEEEEEE
T ss_pred CCCCCccccccCCCCeEEEEeCCCCCCCCCC--CceEEEEeccccchhhCCCccccccccCCCCEEEecCCE
Confidence 5555689999999999999993345556555 899999999999999999999988776666 9999995
No 29
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.3e-54 Score=447.24 Aligned_cols=377 Identities=21% Similarity=0.284 Sum_probs=295.7
Q ss_pred CHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHH
Q 010774 44 SPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACN 123 (501)
Q Consensus 44 tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~ 123 (501)
||.++|.++++++|+++|+++. + +++||+||.++++++|++|++. +||+|+++++|++++++++|||+
T Consensus 2 tl~~~l~~~a~~~pd~~Al~~~---~------~~~Ty~eL~~~~~~lA~~L~~~---~gd~V~i~~~n~~e~~~~~lA~~ 69 (501)
T 3ipl_A 2 SLDFWLYKQAQQNGHHIAITDG---Q------ESYTYQNLYCEASLLAKRLKAY---QQSRVGLYIDNSIQSIILIHACW 69 (501)
T ss_dssp -CCCHHHHHHHHHTTSEEEECS---S------CEEEHHHHHHHHHHHHHHHHTT---CCSEEEEECCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhcCCceEEEeC---C------cEEEHHHHHHHHHHHHHHHHHc---CCCEEEEEcCCCHHHHHHHHHHH
Confidence 5778999999999999999865 3 4899999999999999999987 89999999999999999999999
Q ss_pred hcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEe-eHH
Q 010774 124 SQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCF-SWE 202 (501)
Q Consensus 124 ~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~ 202 (501)
++|++++|+++.++.+++.++++.++++++|++.+........... ..+..+........... ........ ..+
T Consensus 70 ~~Gav~vpl~~~~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 144 (501)
T 3ipl_A 70 LANIEIAMINTRLTPNEMTNQMRSIDVQLIFCTLPLELRGFQIVSL--DDIEFAGRDITTNGLLD---NTMGIQYDTSNE 144 (501)
T ss_dssp HTTCEEEECCTTSCHHHHHHHHHHTTCCEEEESSCCCCTTSEEEET--TC------------------------------
T ss_pred HcCCEEEecCccCCHHHHHHHHHhcCCCEEEEcccccccccccccc--ccceeeeeecccccccc---cccccccccchh
Confidence 9999999999999999999999999999999998765443221110 11111110000000000 00000000 001
Q ss_pred HHHhcC-CCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 203 EFLQLG-TLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 203 ~~~~~~-~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
...... ..........++++++|+|||||||.||||+++|+++.+.+..+...+ ++..+|++++.+|++|.+|+
T Consensus 145 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~~g~ 219 (501)
T 3ipl_A 145 TVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESL-----GFDRDTNWLSVLPIYHISGL 219 (501)
T ss_dssp -----CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHT-----CCCTTCEEEECSCTTSHHHH
T ss_pred hccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhh-----CCCccCEEEEeCcHHHHHHH
Confidence 111111 001122345679999999999999999999999999999988877666 78899999999999999999
Q ss_pred HHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCC
Q 010774 282 IIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGM 360 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 360 (501)
..++.+++.|+++++.+. ++..+++.++++++|+++++|++++.+++....
T Consensus 220 ~~~~~~l~~G~~~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---------------------------- 271 (501)
T 3ipl_A 220 SVLLRAVIEGFTVRIVDKFNAEQILTMIKNERITHISLVPQTLNWLMQQGLH---------------------------- 271 (501)
T ss_dssp HHHHHHHHHTCEEEECSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCC----------------------------
T ss_pred HHHHHHHHcCceEEeCCCCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCC----------------------------
Confidence 888899999999999875 999999999999999999999999998763100
Q ss_pred CCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCC-CCcccCccc
Q 010774 361 PQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLAD-VFNMIGTVG 439 (501)
Q Consensus 361 ~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~-~~~~~~s~G 439 (501)
. ..+||.+++||+++++++.+++.+ +++++++.||+||+++.++..... ....++++|
T Consensus 272 ---------~-----------~~~lr~i~~gG~~l~~~~~~~~~~-~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~G 330 (501)
T 3ipl_A 272 ---------E-----------PYNLQKILLGGAKLSATMIETALQ-YNLPIYNSFGMTETCSQFLTATPEMLHARPDTVG 330 (501)
T ss_dssp ---------S-----------CTTCCEEEECSSCCCHHHHHHHHH-TTCCEEEEEEEGGGTEEEEEECHHHHHHCTTCCB
T ss_pred ---------C-----------cCcccEEEEeCCCCCHHHHHHHHH-hCCCEeccccccccccceeecCccccccCCCCCC
Confidence 0 026999999999999999999988 499999999999998765543332 234558999
Q ss_pred ccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 440 VPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 440 ~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+|+++++++|+| ++ .++.|||+|+|++++.|||++++.+.. |.+|||+|||.
T Consensus 331 ~p~~~~~~~i~d-~~-------~~~~GEl~v~g~~~~~gY~~~~~~t~~-~~~g~~~TGDl 382 (501)
T 3ipl_A 331 MPSANVDVKIKN-PN-------KEGHGELMIKGANVMNGYLYPTDLTGT-FENGYFNTGDI 382 (501)
T ss_dssp EECTTCEEEEES-CC-------SSCCEEEEEESTTSCSCCSBSTTCCCS-EETTEEEEEEE
T ss_pred CCCCCcEEEEec-CC-------CCCccEEEEeccchhhhhCcChhhcch-hcCCceecCCE
Confidence 999999999999 54 226899999999999999999999988 88999999995
No 30
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=6.9e-55 Score=448.80 Aligned_cols=366 Identities=24% Similarity=0.331 Sum_probs=294.3
Q ss_pred CCCCCHHHHHHHHHHhCCC-CcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHH
Q 010774 40 AGLESPWQFFCDSAKRIPN-NQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIA 118 (501)
Q Consensus 40 ~~~~tl~~~l~~~a~~~p~-~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~ 118 (501)
..+.++.+.|.++++++|+ ++|+++. + +++||+||.++++++|++|. .||+|+++++|+++++++
T Consensus 19 ~~~~tl~~~l~~~a~~~p~d~~Al~~~---~------~~~Ty~eL~~~~~~~A~~L~-----~~~~V~i~~~~~~~~~~~ 84 (505)
T 3nyq_A 19 SHMSSLFPALSPAPTGAPADRPALRFG---E------RSLTYAELAAAAGATAGRIG-----GAGRVAVWATPAMETGVA 84 (505)
T ss_dssp -----CCTTTSSCCCSGGGGSEEEEET---T------EEEEHHHHHHHHHHHHTTCC--------CEEEECCSSHHHHHH
T ss_pred cccchhHHHHHHHHHhCCCCCeEEEEC---C------eeeeHHHHHHHHHHHHhhcc-----CCCEEEEEcCCCHHHHHH
Confidence 4567899999999999987 9999875 3 68999999999999998774 489999999999999999
Q ss_pred HHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceE
Q 010774 119 MEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSC 198 (501)
Q Consensus 119 ~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~ 198 (501)
+|||+++|++++|++|.++.+++.++++.++++++|++.+.... .....+.. +.+...
T Consensus 85 ~la~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~vi~~~~~~~~------~~~~~~~~-~~~~~~--------------- 142 (505)
T 3nyq_A 85 VVAALLAGVAAVPLNPKSGDKELAHILSDSAPSLVLAPPDAELP------PALGALER-VDVDVR--------------- 142 (505)
T ss_dssp HHHHHHHTCCEEEECTTCCHHHHHHHHHHHCCSEEEECTTCCCC------GGGTTSEE-EECCTT---------------
T ss_pred HHHHHHhCCEEEEcCCCCCHHHHHHHHHHCCCCEEEECCccccc------hhhccccc-cccccc---------------
Confidence 99999999999999999999999999999999999998752110 00011111 111110
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHH
Q 010774 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHI 278 (501)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~ 278 (501)
.....+.....++++++|+|||||||.||||+++|+++.+.+..+...+ .+..+|++++.+|++|.
T Consensus 143 ---------~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~-----~~~~~d~~l~~~p~~~~ 208 (505)
T 3nyq_A 143 ---------ARGAVPEDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAW-----QWTGEDVLVQGLPLFHV 208 (505)
T ss_dssp ---------CCCCCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHH-----TCCTTCEEEECCCTTSH
T ss_pred ---------cccCCCCCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHh-----CCCCCcEEEEeccHHHH
Confidence 0111223345678999999999999999999999999999998877766 78899999999999999
Q ss_pred HHHHH-HHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 279 YDQII-ETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 279 ~g~~~-~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
.|+.. ++.++..|+++++.+. ++..+++.+ ++++|+++++|+++..+++.+..
T Consensus 209 ~g~~~~~~~~l~~G~~~~~~~~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~------------------------ 263 (505)
T 3nyq_A 209 HGLVLGILGPLRRGGSVRHLGRFSTEGAAREL-NDGATMLFGVPTMYHRIAETLPA------------------------ 263 (505)
T ss_dssp HHHTTTTHHHHHHTCEEEECSSCCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGG------------------------
T ss_pred HHHHHHHHHHHhcCCEEEECCCCChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhc------------------------
Confidence 99875 8899999999998875 899999999 88999999999999998764211
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccC
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIG 436 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~ 436 (501)
.+ ....+++ ++|.+++||+++++++.+++.+.+++++++.||+||++.+++..... ....+
T Consensus 264 ---------~~-~~~~~l~--------~lr~i~~gg~~l~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~-~~~~~ 324 (505)
T 3nyq_A 264 ---------DP-ELAKALA--------GARLLVSGSAALPVHDHERIAAATGRRVIERYGMTETLMNTSVRADG-EPRAG 324 (505)
T ss_dssp ---------CH-HHHHHHH--------HCSEEEECSSCCCHHHHHHHHHHHSCCCEEEEEETTTEEEEECCTTS-CCCTT
T ss_pred ---------Cc-hhhcccc--------cceEEEECCCCCCHHHHHHHHHhcCCeeecccchhhcccccccCCCC-CCCCC
Confidence 11 1222333 89999999999999999999999999999999999998776654433 34458
Q ss_pred cccccccCeEEEEeecCCCCccCC-CCCCCceEEEecCCccccccCCcccchhhh-ccCcccCCCC
Q 010774 437 TVGVPMTTVEARLESVPEMGYDAL-SSVPRGEICLRGNTLFSGYYKRPDLTEEVI-VDGWFHTEVH 500 (501)
Q Consensus 437 s~G~p~p~~~i~I~d~~~~~~~~~-~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~dgw~~TGD~ 500 (501)
++|+|++|++++|+| +++++++. ..+++|||+|+|++++.|||++|+.|++.| .||||+|||.
T Consensus 325 ~vG~p~~~~~~~i~d-~~g~~~~~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~g~y~TGDl 389 (505)
T 3nyq_A 325 TVGVPLPGVELRLVE-EDGTPIAALDGESVGEIQVRGPNLFTEYLNRPDATAAAFTEDGFFRTGDM 389 (505)
T ss_dssp CCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSCCEETTCHHHHHHTBCTTSCEEEEEE
T ss_pred CcccCCCCCEEEEEC-CCCCCcccCCCCceEEEEEecCchhhhhCCChhHhhhhhcCCCCCccCCe
Confidence 999999999999999 88887775 334899999999999999999999999999 7999999995
No 31
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=1.3e-51 Score=467.73 Aligned_cols=368 Identities=17% Similarity=0.224 Sum_probs=306.1
Q ss_pred CCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHH
Q 010774 42 LESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEA 121 (501)
Q Consensus 42 ~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA 121 (501)
..++.+.|.++++++|+++|+++. + +++||+||.++++++|++|++.|+++||+|+|+++|++++++++||
T Consensus 463 ~~~l~~~~~~~~~~~p~~~Av~~~---~------~~lTY~eL~~~a~~lA~~L~~~Gv~~g~~V~i~~~~s~~~vv~~la 533 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNANPDAPALTYS---G------QTLSYRELDEEANRIARRLQKHGAGKGSVVALYTKRSLELVIGILG 533 (1304)
T ss_dssp CCCHHHHHHHHHHHCTTSEEEESS---S------CEEEHHHHHHHHHHHHHHHHHTTCCTTCEEEECCCSSHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCCeEEEEC---C------eeEcHHHHHHHHHHHHHHHHhcCcCCcCEEEEEeCCCHHHHHHHHH
Confidence 478999999999999999999875 3 4899999999999999999999999999999999999999999999
Q ss_pred HHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCChhhHHHhhhcCceEeeH
Q 010774 122 CNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVSSSQKKEAEELGVSCFSW 201 (501)
Q Consensus 122 ~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 201 (501)
|+++|++++|++|.++.+++.++++.+++++++++.+....+... ......+.+.+..
T Consensus 534 ilkaG~~~vpldp~~p~~rl~~il~~~~~~~vl~~~~~~~~~~~~-----~~~~~~~~~~~~~----------------- 591 (1304)
T 2vsq_A 534 VLKAGAAYLPVDPKLPEDRISYMLADSAAACLLTHQEMKEQAAEL-----PYTGTTLFIDDQT----------------- 591 (1304)
T ss_dssp HHHTTCEEEECCTTSCHHHHHHHHHHHTCCEEEECSTTCTTSTTC-----CCCSEEEESSCGG-----------------
T ss_pred HHHHCCEEEEECCCCHHHHHHHHHHHcCCCEEEECcchhhhhhcc-----CCCCcEEEecccc-----------------
Confidence 999999999999999999999999999999999988655432111 1112233332110
Q ss_pred HHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHH
Q 010774 202 EEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQ 281 (501)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~ 281 (501)
. .. ...........++++++|+|||||||.||||+++|+++.+. ......+ .+..+|+++...|++|..+.
T Consensus 592 -~-~~-~~~~~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~-----~~~~~d~~l~~~~~~fd~~~ 662 (1304)
T 2vsq_A 592 -R-FE-EQASDPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYM-----AFSDQDTFLSVSNYAFDAFT 662 (1304)
T ss_dssp -G-GG-SCSSCCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSS-----CCCTTCEEEECSCTTSTHHH
T ss_pred -c-cc-cccCCCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhc-----CCCCCCEEEEECCccHHHHH
Confidence 0 00 01111223456789999999999999999999999999876 3444444 77899999999999998888
Q ss_pred HHHHHHHhcCcEEEEecC----CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 282 IIETHCIHKGCSIGFWRG----DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 282 ~~~~~~l~~G~~~~~~~~----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
..++.+|+.|+++++.+. ++..+++.++++++|+++++|++++.+.+..
T Consensus 663 ~~~~~~l~~G~~l~~~~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~--------------------------- 715 (1304)
T 2vsq_A 663 FDFYASMLNAARLIIADEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAG--------------------------- 715 (1304)
T ss_dssp HHHHHHHTTTCEEEECCGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC---------------------------
T ss_pred HHHHHHHHcCCEEEECChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc---------------------------
Confidence 778999999999999864 8999999999999999999999999886520
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhh-CCCeeeeecccccCcceecccCCC---Cc
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTS-GAPLTQGYGLTESCSGCFTSLADV---FN 433 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~-~~~l~~~yG~tE~~~~~~~~~~~~---~~ 433 (501)
. ..++ +||.+++|||++++++.++|.+.+ +++++|.||+||++++++...... ..
T Consensus 716 ---------~----~~~~--------~lr~~~~gGe~l~~~~~~~~~~~~~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~ 774 (1304)
T 2vsq_A 716 ---------E----DWMK--------GLRCILFGGERASVPHVRKALRIMGPGKLINCYGPTEGTVFATAHVVHDLPDSI 774 (1304)
T ss_dssp ---------S----HHHH--------TCSEEEEESSCCCHHHHHHHHHHHCTTCEEEEECCGGGSSCSEEEECCCCCSSC
T ss_pred ---------h----hcCC--------CccEEEEecCCCCHHHHHHHHHhCCCCEEEEeEChhHHhHHheeeeccCccccC
Confidence 0 0122 899999999999999999998887 478999999999998776554322 22
Q ss_pred ccCcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhh-c------cCcccCCCC
Q 010774 434 MIGTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVI-V------DGWFHTEVH 500 (501)
Q Consensus 434 ~~~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~-~------dgw~~TGD~ 500 (501)
...++|+|++|++++|+| ++++++|.| ++|||||+|+++++||+|+|+.|++.| . ++||+|||-
T Consensus 775 ~~~~iG~p~~~~~~~i~d-~~~~~~p~G--~~GEl~i~G~~v~~GY~~~p~~T~~~f~~~p~~~g~~~yrTGDl 845 (1304)
T 2vsq_A 775 SSLPIGKPISNASVYILN-EQSQLQPFG--AVGELCISGMGVSKGYVNRADLTKEKFIENPFKPGETLYRTGDL 845 (1304)
T ss_dssp SSCCCBEECTTEEEEEEC-TTSCBCCTT--CCEEEEEEETTCCCCBTTCHHHHHHHEEECTTSTTCEEEEEEEE
T ss_pred CCCCCceeeCCCEEEEEC-CCcCCCCCC--CceEEEEeccccCccccCCcccchhhhccCCCCCCCeeEecCCe
Confidence 346899999999999999 989888877 899999999999999999999999998 2 349999994
No 32
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=99.97 E-value=9.1e-32 Score=263.71 Aligned_cols=200 Identities=17% Similarity=0.176 Sum_probs=167.6
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
.+++++|+|||||||.||||++||+++++.+..+...+ ++..+|++++.+|++|.+|+..++.++..|+++++..
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~-----~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~~~ 110 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKAL-----SLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTVTE 110 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHT-----TCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEEC
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHh-----CCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEecC
Confidence 36789999999999999999999999999998877776 8889999999999999999988889999999998876
Q ss_pred CCHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHHHHHHHH
Q 010774 299 GDVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIR 378 (501)
Q Consensus 299 ~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 378 (501)
.. ...++.++++++|+++++|++++.+++... ...++
T Consensus 111 ~~-~~~~~~i~~~~~t~~~~~P~~l~~ll~~~~--------------------------------------~~~~l---- 147 (358)
T 4gs5_A 111 PT-ANPLAGLDHADFDFVAMVPMQLQSILENSA--------------------------------------TSGQV---- 147 (358)
T ss_dssp CC-SCTTTTCSSCCCSEEEECHHHHHHHHHCTT--------------------------------------TGGGG----
T ss_pred cc-ccHHHHHHHhCCeEEEcChHHHHHhhcccc--------------------------------------ccccC----
Confidence 42 234667899999999999999999876210 11122
Q ss_pred HHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeecCCCCcc
Q 010774 379 EAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESVPEMGYD 458 (501)
Q Consensus 379 ~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~~~~~~~ 458 (501)
++||.+++||+++++++.+++++. ++++++.||+||+++.++....+... .+++|.+.||+++.+.+
T Consensus 148 ----~~lr~v~~gG~~l~~~~~~~~~~~-~~~~~~~YG~TEt~~~~~~~~~~~~~-~g~~~~~~pgv~~~~~~------- 214 (358)
T 4gs5_A 148 ----DRLGKVLLGGAPVNHALAMQISDL-AMPVYQSYGMTETVSHVALKALNGPE-ASELYVFLPGIQYGVDE------- 214 (358)
T ss_dssp ----GGGCSEEECSSCCCHHHHHHHHTC-SSCEEEEEECGGGSSEEEEEECSSTT-CCSCEEECTTCEEEECT-------
T ss_pred ----CcceEEEEcccCCCchheeccccc-CceEEeccccccccceeecccccccc-cceeeccCCCeEEEecC-------
Confidence 389999999999999999999874 99999999999999888776655444 48899999999888744
Q ss_pred CCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 459 ALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 459 ~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
.|||+++|+.+ .+|||+|||.
T Consensus 215 ------~Gel~~~g~~~---------------~~g~~~TGDl 235 (358)
T 4gs5_A 215 ------RGCLHISGAVT---------------NGQTVQTNDL 235 (358)
T ss_dssp ------TSEEEEESGGG---------------TTCCEEEEEE
T ss_pred ------cCceEEecccc---------------cCcceecCCc
Confidence 59999998643 3689999984
No 33
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=99.97 E-value=2.5e-30 Score=261.21 Aligned_cols=223 Identities=13% Similarity=0.059 Sum_probs=175.1
Q ss_pred CCCC-CCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHH-HHHHHHhcCcE
Q 010774 216 PKKK-TNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQI-IETHCIHKGCS 293 (501)
Q Consensus 216 ~~~~-~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~-~~~~~l~~G~~ 293 (501)
...+ +++++|+|||||||.||+|+++|.++.+....+...+ ...++..+|++++..|+.|..+.. ..+.++..|++
T Consensus 81 ~~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~ 158 (436)
T 3qov_A 81 AGDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCL--YMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCL 158 (436)
T ss_dssp CSCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHH--HHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCE
T ss_pred cCCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHH--HHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCE
Confidence 3455 8899999999999999999999999987766543221 112678899999999986555554 57888999999
Q ss_pred EEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhccCCCCCCcchhHHHH
Q 010774 294 IGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMKKGMPQNKAAPLLDSL 372 (501)
Q Consensus 294 ~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (501)
+++.+. ++..+++.++++++|+++++|+++..+++.+........
T Consensus 159 ~~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~---------------------------------- 204 (436)
T 3qov_A 159 TVPAAAGNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGIDPR---------------------------------- 204 (436)
T ss_dssp EECCCSCCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTCCTT----------------------------------
T ss_pred EEeCCCCCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCCCcc----------------------------------
Confidence 998764 999999999999999999999999999875433211100
Q ss_pred HHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcceecccCCCCcccCcccccccCeEEEEeec
Q 010774 373 VFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSGCFTSLADVFNMIGTVGVPMTTVEARLESV 452 (501)
Q Consensus 373 ~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~~~~~~~~~~~~~~s~G~p~p~~~i~I~d~ 452 (501)
+ +++|.+++||+++++++.+++++.||+.+++.||+||+++.++..... .. ...|.|.++++++|+|.
T Consensus 205 -~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~~~~~~~~~~--~~-~g~~~~~~~~~v~i~d~ 272 (436)
T 3qov_A 205 -E--------TTLKTLVIGAEPHTDEQRRKIERMLNVKAYNSFGMTEMNGPGVAFECQ--EQ-NGMHFWEDCYLVEIIDP 272 (436)
T ss_dssp -S--------SSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEEGGGTEEEEEEECT--TC-SSEEECTTTEEEEEECT
T ss_pred -c--------CCccEEEEeCCcCCHHHHHHHHHHhCccEEecCcchhhcCCeeEEecC--CC-CeeEEccCceEEEEEEC
Confidence 1 389999999999999999999999999999999999996553322211 11 33677788999999995
Q ss_pred CCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 453 PEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 453 ~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
+++++++.| +.|||+|+|. +.+.+.++||+|||.
T Consensus 273 ~~g~~~~~g--~~Gel~v~~~------------~~~~~~~~~y~TGDl 306 (436)
T 3qov_A 273 ETGEPVPEG--EIGELVLTTL------------DREMMPLIRYRTRDL 306 (436)
T ss_dssp TTCSBCSTT--CCEEEEEEES------------SCCSSCCCSEEEEEE
T ss_pred CCCCCCCCC--CceEEEEecc------------CcCCceEEEEEcCCE
Confidence 567777766 8999999983 234456899999995
No 34
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.97 E-value=2.9e-30 Score=254.94 Aligned_cols=227 Identities=15% Similarity=0.137 Sum_probs=179.8
Q ss_pred CCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh-HHHHHHHHHHHHHhcCcEEE
Q 010774 217 KKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHIYDQIIETHCIHKGCSIG 295 (501)
Q Consensus 217 ~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl-~~~~g~~~~~~~l~~G~~~~ 295 (501)
..++++++|+|||||||.||+|.++|.++.....++...+ ...++..+|++++.+|+ +|..++...+.++..|+.++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGY--QHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTT--TTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhH--HhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEE
Confidence 4678889999999999999999999999999887543221 12267889999999999 99999988777799999444
Q ss_pred EecCCHH-----------------------HHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHH
Q 010774 296 FWRGDVR-----------------------YLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYK 352 (501)
Q Consensus 296 ~~~~~~~-----------------------~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 352 (501)
....++. .+++.++++++|+++++|+++..|++.
T Consensus 166 ~~~~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~----------------------- 222 (369)
T 3hgu_A 166 SIDIDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKR----------------------- 222 (369)
T ss_dssp CCCCCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTC-----------------------
T ss_pred CccCChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhh-----------------------
Confidence 3344666 788899999999999999999998752
Q ss_pred hhhhccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHH-Hhh-CCCeeeeecccccCcceecccCC
Q 010774 353 LGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLR-VTS-GAPLTQGYGLTESCSGCFTSLAD 430 (501)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~-~~~-~~~l~~~yG~tE~~~~~~~~~~~ 430 (501)
+.....+++ ++|.+++||+++++++.+++. +.| ++.+++.||+||+++++...+.
T Consensus 223 --------------~~~~~~~~~--------~lr~i~~gGe~l~~~~~~~~~~~~~p~~~v~~~YG~TE~~~~~~~~~~- 279 (369)
T 3hgu_A 223 --------------PEVVLQMKQ--------SLAQITLGGTELNLDEIKFIASEILPDCEFSASYGSTSALGVSRSLLI- 279 (369)
T ss_dssp --------------HHHHHHHHH--------HCSEEEEESSCCCHHHHHHHHHHTCTTSEEEEEEEEGGGTEEEEECCB-
T ss_pred --------------hhhhccccC--------CeeEEEECCccCCHHHHHHHHHHhCCCcEEEcccCchhhhcceecccc-
Confidence 222334444 899999999999999999999 888 8999999999999876532211
Q ss_pred CCcccCccccc------ccCeEEEEeecC-CCCccCCCCCCCceEEEecC---CccccccCCcccchhhhccCcccCCC
Q 010774 431 VFNMIGTVGVP------MTTVEARLESVP-EMGYDALSSVPRGEICLRGN---TLFSGYYKRPDLTEEVIVDGWFHTEV 499 (501)
Q Consensus 431 ~~~~~~s~G~p------~p~~~i~I~d~~-~~~~~~~~~~~~Gei~v~g~---~v~~gY~~~~~~~~~~~~dgw~~TGD 499 (501)
.++|+| +|+++++|+| + ++++++.| +.|||+|++. ..+.+|...+..+.....+||+.+|+
T Consensus 280 -----~~~G~~~~~~~~~~~~~v~ivD-~~~g~~vp~G--~~GEl~vt~l~~~~~l~ry~tgD~~~~~~~~~g~~~d~~ 350 (369)
T 3hgu_A 280 -----TSESQQVIYDSFSPFITYDVVD-SITAQTVEYG--ERGNVIVTHLSPWAFYPRVAERDTAIRLPGVSGFAGDRL 350 (369)
T ss_dssp -----CTTCSSCEEECCTTTEEEEEEC-TTTCSBCCTT--CEEEEEEEEEETTEEEEEEEEEEEEEEECCSTTCSSCEE
T ss_pred -----ccCCCcccccCCCCCeEEEEEC-CCCCcCCCCC--CceEEEEEEcCcccccccccCCceEEEecCCCCCcCccc
Confidence 248999 9999999999 6 78877766 9999999983 34778887766666555789988875
No 35
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=99.97 E-value=9.5e-30 Score=257.04 Aligned_cols=237 Identities=16% Similarity=0.073 Sum_probs=179.4
Q ss_pred eHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh-HHH
Q 010774 200 SWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AHI 278 (501)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl-~~~ 278 (501)
..+++.... +.......++++++++|||||||.||+|.++|.++......+...+ ...++..+|++++.+|+ +|.
T Consensus 72 ~~~~l~~~~--~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~~~~~~~~~~~ 147 (437)
T 2y27_A 72 TKGDLRDSY--PFGMFAVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSI--RAAGARRGDKVHVSYGYGLFT 147 (437)
T ss_dssp CHHHHHHTT--TTTTCSSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHH--HHTTCCTTCEEEECSCCSSSH
T ss_pred CHHHHHhcC--CCccccCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHH--HHcCCCCCCEEEEcccccccc
Confidence 445554433 1123344568899999999999999999999999887765433211 01267889999999998 677
Q ss_pred HHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhhc
Q 010774 279 YDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNMK 357 (501)
Q Consensus 279 ~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 357 (501)
.++...+.++..|+++++.+. ++..+++.++++++|+++++|+++..+++.........
T Consensus 148 ~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~-------------------- 207 (437)
T 2y27_A 148 GGLGAHYGAERAGLTVIPFGGGQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDP-------------------- 207 (437)
T ss_dssp HHHHHHHHHHHTTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCG--------------------
T ss_pred cchHHHHHHHHcCCEEEeCCCCCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCc--------------------
Confidence 777778889999999987765 99999999999999999999999999987543221000
Q ss_pred cCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcc-eecccCCCCcccC
Q 010774 358 KGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNMIG 436 (501)
Q Consensus 358 ~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~-~~~~~~~~~~~~~ 436 (501)
++ +++|.+++||+++++++.+++++.+|+.+++.||+||+++. ++...... ..
T Consensus 208 ---------------~~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~---~~ 261 (437)
T 2y27_A 208 ---------------VQ--------SSLRIGIFGAEPWTNDMRVAIEQRMGIDAVDIYGLSEVMGPGVASECVET---KD 261 (437)
T ss_dssp ---------------GG--------SSCCEEEEESSCCCHHHHHHHHHHHTSEEEEEEEETTTTEEEEEECCTTT---CS
T ss_pred ---------------cc--------CCeeEEEEcCccCCHHHHHHHHHHHCcCEEecCCchhhcCCeeEEecCCC---CC
Confidence 00 38999999999999999999999889999999999998543 33322211 11
Q ss_pred cccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 437 TVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 437 s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
..+.+.+++.++|+|.+++++++.| +.|||+|+|. +.+.+.++||+|||.
T Consensus 262 g~~~~~~~~~~~i~d~~~g~~~~~g--~~Gel~v~~~------------t~~~~~~~~y~TGDl 311 (437)
T 2y27_A 262 GPTIWEDHFYPEIIDPETGEVLPDG--ELGELVFTSL------------TKEALPIIRYRTRDL 311 (437)
T ss_dssp SCEECTTTEEEEEECTTTCCBCCTT--CCEEEEEEES------------SCSSSCCCSEEEEEE
T ss_pred ceeEccCceEEEEEcCCCCCCCCCC--CccEEEEecC------------CcCCchhheeecCCE
Confidence 2566778999999993347777655 8999999982 334456899999995
No 36
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=99.97 E-value=1.5e-29 Score=256.15 Aligned_cols=238 Identities=14% Similarity=0.074 Sum_probs=179.1
Q ss_pred eeHHHHHhcCCCCCCCCCCCCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecCh-HH
Q 010774 199 FSWEEFLQLGTLDCELPPKKKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPL-AH 277 (501)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl-~~ 277 (501)
...+++.... +.......++++++++|||||||.||+|.++|+++......+...+ ...++..+|++++..|+ +|
T Consensus 73 ~~~~~l~~~~--p~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~ 148 (443)
T 2y4o_A 73 STKNDLRDNY--PFGLFAVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSI--RAAGGRPGDTLHNAFGYGLF 148 (443)
T ss_dssp BCHHHHHTTT--TTTTCSSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHH--HHTTCCTTCEEEECSCCSSS
T ss_pred CcHHHHHhhC--CCcccCCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHH--HHcCCCCCCEEEEeccCccc
Confidence 3455554432 1122334568899999999999999999999999887665443211 01267889999999998 57
Q ss_pred HHHHHHHHHHHhcCcEEEEecC-CHHHHHHHHhhhcCcEEEecchHHHHHHHHHHHHhhcCChhHHHHHHHHHHHHhhhh
Q 010774 278 IYDQIIETHCIHKGCSIGFWRG-DVRYLMEDIQELKPTMFSGVPRVYDRIYTGISNKISSGGALSKKLFEFAYNYKLGNM 356 (501)
Q Consensus 278 ~~g~~~~~~~l~~G~~~~~~~~-~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (501)
..++...+.++..|+++++.+. ++..+++.|+++++|+++++|+++..|++.+.......
T Consensus 149 ~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~------------------- 209 (443)
T 2y4o_A 149 TGGLGIHYGAERLGCMVVPMSGGQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDP------------------- 209 (443)
T ss_dssp HHHHHHHHHHHHHTCEEECCCSCCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCG-------------------
T ss_pred ccHHHHHHHHHHcCCEEEECCCCCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCc-------------------
Confidence 7777678889999999988765 99999999999999999999999999887543221000
Q ss_pred ccCCCCCCcchhHHHHHHHHHHHHhCCceeEEEEecCCCCHHHHHHHHHhhCCCeeeeecccccCcc-eecccCCCCccc
Q 010774 357 KKGMPQNKAAPLLDSLVFSKIREAFGGRLQAMLSGAAPLPIHVEEFLRVTSGAPLTQGYGLTESCSG-CFTSLADVFNMI 435 (501)
Q Consensus 357 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~~~~l~~~yG~tE~~~~-~~~~~~~~~~~~ 435 (501)
++ +++|.+++||+++++++.+++++.+|+.+++.||+||+++. +....... .
T Consensus 210 ----------------~~--------~~lr~i~~gGe~l~~~~~~~~~~~~g~~v~~~YG~TE~~g~~~~~~~~~~---~ 262 (443)
T 2y4o_A 210 ----------------AE--------SSLKIGIFGAEPWTQALRNEVETRVGIDALDIYGLSEVMGPGVACECVET---K 262 (443)
T ss_dssp ----------------GG--------SSCCEEEEESSCCCHHHHHHHHHHHTCEEEEEEEETTTTEEEEEEECTTT---C
T ss_pred ----------------cc--------CCceEEEECCCcCCHHHHHHHHHHhCcCEEeccCchhhcCCeEEeccCCC---C
Confidence 01 38999999999999999999999899999999999998543 33322211 1
Q ss_pred CcccccccCeEEEEeecCCCCccCCCCCCCceEEEecCCccccccCCcccchhhhccCcccCCCC
Q 010774 436 GTVGVPMTTVEARLESVPEMGYDALSSVPRGEICLRGNTLFSGYYKRPDLTEEVIVDGWFHTEVH 500 (501)
Q Consensus 436 ~s~G~p~p~~~i~I~d~~~~~~~~~~~~~~Gei~v~g~~v~~gY~~~~~~~~~~~~dgw~~TGD~ 500 (501)
...+.+.+++.++|+|.+++++++.| +.|||+|+|. +++.|.++||+|||.
T Consensus 263 ~g~~~~~~~~~~~i~d~~~g~~~~~G--~~Gel~v~~~------------t~~~~p~~~y~TGDl 313 (443)
T 2y4o_A 263 DGPVIWEDHFYPEIIDPVTGEVLPDG--SQGELVFTSL------------TKEAMPVIRYRTRDL 313 (443)
T ss_dssp CSEEECTTTEEEEEECTTTCCBCCTT--CCEEEEEEES------------SCSSSCCSSEEEEEE
T ss_pred CceEEccCCeEEEEEcCCCCCCCCCC--CceEEEEeCC------------CcccChhheeecCCE
Confidence 12556778999999993357777765 8999999983 334456899999995
No 37
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=91.32 E-value=1.1 Score=43.86 Aligned_cols=107 Identities=10% Similarity=-0.054 Sum_probs=82.3
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
..+|.+.+...+..+++.+...|+.++|++....+- ....+..+++++..|+.+++.++ ..++.+...++..++.++
T Consensus 104 v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~~~~-~~~~~~~~~i~~~~~t~~ 182 (436)
T 3qov_A 104 IVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVPAAA-GNSKRQIKFISDFKTTAL 182 (436)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEECCCS-CCHHHHHHHHHHHTCCEE
T ss_pred EEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEeCCC-CCHHHHHHHHHHHCCCEE
Confidence 468999999999999988888999999999999874 34455677888999999988765 477889999999999999
Q ss_pred EEcCCChhhhhhcCcc-----CCCCccEEEEecCC
Q 010774 154 FVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (501)
Q Consensus 154 l~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~ 183 (501)
+.....+..+.+.... ....++.++.-+..
T Consensus 183 ~~~P~~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 217 (436)
T 3qov_A 183 HAIPSYAIRLAEVFQEEGIDPRETTLKTLVIGAEP 217 (436)
T ss_dssp ECCHHHHHHHHHHHHHTTCCTTSSSCCEEEEESSC
T ss_pred EECHHHHHHHHHHHHHcCCCcccCCccEEEEeCCc
Confidence 9877666555443211 13567777776554
No 38
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=90.99 E-value=1.2 Score=43.72 Aligned_cols=125 Identities=16% Similarity=0.061 Sum_probs=88.6
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc--hhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC--PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~--~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++.+..- .|.+|. ...+|.+.+...+..+++.+...|+.++|++...++.+ ...+..+++++..|+.+++
T Consensus 90 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~ 167 (443)
T 2y4o_A 90 PREQVVRVHAS--SGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGLGIHYGAERLGCMVVP 167 (443)
T ss_dssp CGGGCCEEEEE--CCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHHTCEEEC
T ss_pred ChhheEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHHHHHHHHHHcCCEEEE
Confidence 34555544330 333342 24679999998888888888888999999999998853 4445667888999999988
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc-----CCCCccEEEEecCC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~ 183 (501)
+++. +.+.+...++..++.+++.....+..+.+.... ....++.++.-+..
T Consensus 168 ~~~~-~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 223 (443)
T 2y4o_A 168 MSGG-QTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMDPAESSLKIGIFGAEP 223 (443)
T ss_dssp CCSC-CHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCCC-CHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCCcccCCceEEEECCCc
Confidence 7764 788999999999999999877666555443211 12466777666544
No 39
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=90.70 E-value=3 Score=42.35 Aligned_cols=30 Identities=23% Similarity=0.345 Sum_probs=25.1
Q ss_pred CCCCeEEEEecCCCC-CCCceEEeecHHHHH
Q 010774 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVA 247 (501)
Q Consensus 218 ~~~~~~~i~~TSGtT-G~PK~v~~sh~~l~~ 247 (501)
.++.+.+..-||||| |.+|-+.+|...+-.
T Consensus 91 ~~~pi~~F~~SSGTT~g~~K~IP~T~e~l~~ 121 (581)
T 4eql_A 91 SARTITGFLLSSGTSGGAQKMMPWNNKYLDN 121 (581)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred CCCCCCeEEeCCCCCCCCccccccCHHHHHH
Confidence 456667899999999 779999999998755
No 40
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=90.47 E-value=1.1 Score=43.95 Aligned_cols=125 Identities=16% Similarity=0.079 Sum_probs=88.5
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++.+..- .|.+|. ...+|.+.+...+..+++.+...|+.++|++...++. ....+..+++++..|+.+++
T Consensus 88 ~~~~~~~i~~T--SGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 165 (437)
T 2y27_A 88 PQDRISRIHAS--SGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGLGAHYGAERAGLTVIP 165 (437)
T ss_dssp CGGGCCEEEEC--CCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHHHHHHHHHHTTCEEEC
T ss_pred ChhHeEEEEEC--CCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccchHHHHHHHHcCCEEEe
Confidence 34566655440 233332 2468999999888888888888899999999998885 34445567888999999987
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCcc-----CCCCccEEEEecCC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPR-----CCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~~ 183 (501)
+++ .+.+.+...++..++.+++.....+..+.+.... ....++.++.-+..
T Consensus 166 ~~~-~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~~~~~~lr~i~~gGe~ 221 (437)
T 2y27_A 166 FGG-GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLDPVQSSLRIGIFGAEP 221 (437)
T ss_dssp CCS-CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCCGGGSSCCEEEEESSC
T ss_pred CCC-CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCCcccCCeeEEEEcCcc
Confidence 765 4788999999999999999887666555443211 12456666665544
No 41
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=86.95 E-value=9.1 Score=38.02 Aligned_cols=122 Identities=12% Similarity=0.017 Sum_probs=85.2
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~l 132 (501)
.++.+|++..- .|.+|. ...+|.+.+...+..+.. ..++.++|++...+|-. ...+..+++++..|+.++..
T Consensus 161 ~~~d~a~i~~T--SGTTG~PKgv~~th~~~~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~ 235 (501)
T 3ipl_A 161 NLDDIASIMFT--SGTTGPQKAVPQTFRNHYASAIGCKE---SLGFDRDTNWLSVLPIYHISGLSVLLRAVIEGFTVRIV 235 (501)
T ss_dssp CTTSEEEEEEC--CTTTSCCCEEEEEHHHHHHHHHHHHH---HTCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCcEEEEeHHHHHHHHHHHHH---hhCCCccCEEEEeCcHHHHHHHHHHHHHHHcCceEEeC
Confidence 46777776650 222222 247899988877666544 45889999999988854 33344567888899988877
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCC
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (501)
+ ..+++.+...++..++..++.....+..+.+........++.++..+..
T Consensus 236 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~lr~i~~gG~~ 285 (501)
T 3ipl_A 236 D-KFNAEQILTMIKNERITHISLVPQTLNWLMQQGLHEPYNLQKILLGGAK 285 (501)
T ss_dssp S-SCCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCSCTTCCEEEECSSC
T ss_pred C-CCCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCCcCcccEEEEeCCC
Confidence 6 4789999999999999999988877766655544433466666665544
No 42
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=78.37 E-value=35 Score=34.14 Aligned_cols=122 Identities=7% Similarity=-0.114 Sum_probs=82.9
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH--HH-HHHHHHhcCCEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--II-AMEACNSQAITYV 130 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~--~~-~~lA~~~~G~~~v 130 (501)
.|+.+|++..- .|.+|. ...+|.+.+...+...... .++.++|++...+|-+-.+ .. .+++++..|+.++
T Consensus 180 ~~~d~a~i~~T--SGTTG~PKgV~~th~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 254 (539)
T 1mdb_A 180 KSSDVAFLQLS--GGSTGLSKLIPRTHDDYIYSLKRSVEV---CWLDHSTVYLAALPMAHNYPLSSPGVLGVLYAGGRVV 254 (539)
T ss_dssp CTTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHHH---HTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CcCceEEEEeC--CCcCCCCcEEEEehHHHHHHHHHHHHh---hCCCCCCEEEEeecccccchhhHHHHHHHHHhCCEEE
Confidence 46677776550 222221 2478999888776655543 3788999999988865333 22 4788899999988
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEecCC
Q 010774 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (501)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 183 (501)
..+ ..+++.+...++..++.+++.....+..+.+.. ...+..++.++.-+..
T Consensus 255 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~~~~gG~~ 309 (539)
T 1mdb_A 255 LSP-SPSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRRDDLSSLQVLQVGGAK 309 (539)
T ss_dssp ECS-SSSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCCCCCTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccCCCccceeEEEEcCCC
Confidence 765 468889999999999999998776655544322 2334567777666544
No 43
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=77.26 E-value=18 Score=36.32 Aligned_cols=122 Identities=11% Similarity=-0.010 Sum_probs=81.2
Q ss_pred CCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH--HHHHHHHHhcCCEEEEec
Q 010774 58 NNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW--IIAMEACNSQAITYVPLY 133 (501)
Q Consensus 58 ~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~--~~~~lA~~~~G~~~v~l~ 133 (501)
+.+|++..- .|.+|. ...+|.+.+...+......+...++.++|++...+|-.-.+ ...+++.+ .|+.++.++
T Consensus 192 ~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l-~G~~~v~~~ 268 (548)
T 2d1s_A 192 EQVALIMNS--SGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVVPFHHGFGMFTTLGYLI-CGFRVVMLT 268 (548)
T ss_dssp TCEEEEECC--SSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHH-TTCEEEECC
T ss_pred CCEEEEEeC--CCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEeccHHHHHHHHHHHHHHh-cCcEEEEcC
Confidence 667766550 222221 24789999887766655443336888999999888865333 33356667 998888775
Q ss_pred CCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---cCCCCccEEEEecCC
Q 010774 134 DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (501)
Q Consensus 134 ~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 183 (501)
..+++.+...++..++..++.....+..+.+... ..+..++.++.-+..
T Consensus 269 -~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 320 (548)
T 2d1s_A 269 -KFDEETFLKTLQDYKCTSVILVPTLFAILNKSELLNKYDLSNLVEIASGGAP 320 (548)
T ss_dssp -CCCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCGGGSCCTTCCEEEECSSC
T ss_pred -CCCHHHHHHHHHHcCCcEEEecHHHHHHHHhCcccccccccceeEEEEcCcc
Confidence 5788999999999999999988776665544321 133566666665543
No 44
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=73.44 E-value=7.6 Score=36.79 Aligned_cols=105 Identities=10% Similarity=0.005 Sum_probs=70.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC--chhHHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN--CPEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n--~~~~~~~~lA~~~~G~~~v~ 131 (501)
.++.++.+... .|.+|. ...+|.+.+...+..+++.+...|+.++|++..++|- ..--+...+++...|+.+++
T Consensus 89 ~~~~~a~i~~T--SGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~~~~~~~~G~~v~~ 166 (369)
T 3hgu_A 89 PADSHPQVYES--GGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAINKERALRLGGMFFS 166 (369)
T ss_dssp CTTCCCEEEEE--CC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHHHHHHHHTTSCEEC
T ss_pred CccccEEEEEC--CCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHHHHHHHHcCCEEEC
Confidence 45555665441 333332 2467899998888877777777899999999999886 23334455566889985555
Q ss_pred ecCCCCHH-----------------------HHHHHHHhcCceEEEEcCCChhhhh
Q 010774 132 LYDTLGAN-----------------------AVEFIINHAEVSIAFVQENKIPSIL 164 (501)
Q Consensus 132 l~~~~~~~-----------------------~l~~~l~~~~~~~vl~~~~~~~~~~ 164 (501)
.+ .++. ++...++..++.+++.....+..+.
T Consensus 167 ~~--~dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~ 220 (369)
T 3hgu_A 167 ID--IDPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELL 220 (369)
T ss_dssp CC--CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHT
T ss_pred cc--CChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHH
Confidence 43 3444 6666889999999988766555443
No 45
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=66.57 E-value=45 Score=33.63 Aligned_cols=123 Identities=9% Similarity=-0.143 Sum_probs=82.4
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--HHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 131 (501)
.|+.+|++..- .|.+|. ...+|.+.+...+..+.. ..++.++|++..++|-.-.+- ..+++.+..|+.++.
T Consensus 165 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~v~ 239 (590)
T 3kxw_A 165 KSNDIAFLQYT--SGSTMHPKGVMVSHHNLLDNLNKIFT---SFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQAIM 239 (590)
T ss_dssp CTTSEEEEEEC--SSCSSSCCEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--cCCCCCceEEEeeHHHHHHHHHHHHH---hhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceEEE
Confidence 46677776650 222221 247899998887766655 458899999999998764443 337888999999988
Q ss_pred ecCCC---CHHHHHHHHHhcCceEEEEcCCChhhhhhcC------ccCCCCccEEEEecCC
Q 010774 132 LYDTL---GANAVEFIINHAEVSIAFVQENKIPSILSCL------PRCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~~~---~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~ 183 (501)
+.+.. .+..+...++..++.++.........+.+.. ...+..++.++.-+..
T Consensus 240 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~ 300 (590)
T 3kxw_A 240 MSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEKKEGLDLSSWVTAFNGAEP 300 (590)
T ss_dssp CCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGGGTTCCCTTCCEEEECSSC
T ss_pred eCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhhccCCCchhhHHHhhCCCC
Confidence 87643 6778888999999998887665444433321 1233566666665544
No 46
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=66.03 E-value=20 Score=33.82 Aligned_cols=121 Identities=12% Similarity=0.036 Sum_probs=73.3
Q ss_pred hCCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCc-hhHHHHHHHHHhcCCEEEE
Q 010774 55 RIPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNC-PEWIIAMEACNSQAITYVP 131 (501)
Q Consensus 55 ~~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~-~~~~~~~lA~~~~G~~~v~ 131 (501)
.+.|.+|++..- .|.+|. ...+|.+.+...+..++. ..++.++|++...+|-+ ..-+..++..+..|+..+.
T Consensus 34 w~~d~~a~Il~T--SGTTG~PKgV~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~~~~l~~g~~~~~ 108 (358)
T 4gs5_A 34 WLGGAREFVLHT--SGSTGMPKPITVTRAQLAASAAMTGK---ALSLGPGTRALVCLNVGYIAGLMMLVRGMELDWELTV 108 (358)
T ss_dssp HHHTCSEEEEEE--ECTTSSEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEE
T ss_pred cCCCCCEEEEEC--CcccccCcEEEEeHHHHHHHHHHHHH---HhCCCCCCEEEEECChHHHHHHHHHHHHHHhCcEEEe
Confidence 345666665440 233332 247899998877665554 45889999999988854 3334456666777888777
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc--cCCCCccEEEEecCC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~ 183 (501)
..+.... ...++..++..++.....+..+.+... ..+..++.++.-+..
T Consensus 109 ~~~~~~~---~~~i~~~~~t~~~~~P~~l~~ll~~~~~~~~l~~lr~v~~gG~~ 159 (358)
T 4gs5_A 109 TEPTANP---LAGLDHADFDFVAMVPMQLQSILENSATSGQVDRLGKVLLGGAP 159 (358)
T ss_dssp ECCCSCT---TTTCSSCCCSEEEECHHHHHHHHHCTTTGGGGGGGCSEEECSSC
T ss_pred cCccccH---HHHHHHhCCeEEEcChHHHHHhhccccccccCCcceEEEEcccC
Confidence 7665432 345677788888876655544433221 223455666655443
No 47
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=65.24 E-value=59 Score=32.47 Aligned_cols=122 Identities=11% Similarity=-0.046 Sum_probs=80.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHH---HHHHHHhcCCEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWII---AMEACNSQAITYV 130 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~---~~lA~~~~G~~~v 130 (501)
.++.+|++..- .|.+|. ...+|.+.+...+...+.. .++.++|++...+|..-.+-. .+++.+..|+.++
T Consensus 189 ~~~d~a~i~~T--SGTTG~PKgv~~sh~~~~~~~~~~~~~---~~~~~~d~~l~~~p~~h~~~~~~~~~~~~l~~G~~~v 263 (544)
T 3o83_A 189 PADEVAFFQLS--GGSTGTPKLIPRTHNDYDYSVRASAEI---CGLNSNTRLLCALPAPHNFMLSSPGALGVLHAGGCVV 263 (544)
T ss_dssp CTTSEEEEEEC--CC--CCCCEEEEEHHHHHHHHHHHHHH---TTCCTTCEEEECSCTTSHHHHHSSHHHHHHHTTCEEE
T ss_pred CccceEEEEEC--CCcccCCceEEechHHHHHHHHHHHHH---hCCCCCCeEEEecCcceEeecchHHHHHHHHcCCEEE
Confidence 35667776550 222221 2478999988777666554 488999999999885543332 4788888998888
Q ss_pred EecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc---cCCCCccEEEEecCC
Q 010774 131 PLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (501)
Q Consensus 131 ~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 183 (501)
..+ ...+..+...++..++..++.....+..+.+... ..+..++.++.-+..
T Consensus 264 ~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gG~~ 318 (544)
T 3o83_A 264 MAP-NPEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYKDQIQSLKLLQVGGAS 318 (544)
T ss_dssp ECS-SCCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTHHHHTTCCEEEEESSC
T ss_pred ECC-CCCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhccccCCcceEEEEcCCC
Confidence 765 4678888899999999999987765554433221 223456666665543
No 48
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=64.68 E-value=28 Score=34.91 Aligned_cols=107 Identities=8% Similarity=-0.093 Sum_probs=75.4
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
..+|.+.+...+......+...++.++|++...+|-.- --+...++.+..|+.++.+. ..+++.+...++..++..++
T Consensus 208 V~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~l~~G~~~~~~~-~~~~~~~~~~i~~~~~t~~~ 286 (550)
T 3rix_A 208 VALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFHHGFGMFTTLGYLICGFRVVLMY-RFEEELFLRSLQDYKIQSAL 286 (550)
T ss_dssp EEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEECS-SCCHHHHHHHHHHTTCSEEE
T ss_pred hhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHHHHHHHHHHHHHHHcCCEEEEeC-CCCHHHHHHHHHHcCCeEEE
Confidence 47889888776655544444467889999998888553 33455677788899888775 57889999999999999999
Q ss_pred EcCCChhhhhhcCc---cCCCCccEEEEecCC
Q 010774 155 VQENKIPSILSCLP---RCCLYLKTIVSFANV 183 (501)
Q Consensus 155 ~~~~~~~~~~~~~~---~~~~~~~~v~~~~~~ 183 (501)
.....+..+.+... ..+..++.++.-+..
T Consensus 287 ~~P~~~~~l~~~~~~~~~~l~~lr~i~~gG~~ 318 (550)
T 3rix_A 287 LVPTLFSFFAKSTLIDKYDLSNLHEIASGGAP 318 (550)
T ss_dssp ECHHHHHHHHHCCGGGGSCCTTCCEEEECSSC
T ss_pred eCcHHHHHHHhCccccccCcccccEEEEecCC
Confidence 88766655544321 223566777665543
No 49
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=64.62 E-value=34 Score=33.91 Aligned_cols=123 Identities=9% Similarity=-0.046 Sum_probs=81.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (501)
.++.+|++..- .|.+|. ...+|.+.+...+..... ..++.++|++...+|-+- -.+..+++++..|+.++.+
T Consensus 142 ~~~d~a~i~~T--SGTTG~PKgv~~th~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 216 (512)
T 3fce_A 142 KGDENFYIIYT--SGSTGNPKGVQITYNCLVSFTKWAVE---DFNLQTGQVFLNQAPFSFDLSVMDIYPSLVTGGTLWAI 216 (512)
T ss_dssp CTTSEEEEEEE--CC----CEEEEEEHHHHHHHHHHHHH---HTTCCSSCEEEECSCTTSGGGHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCceEEEehHHHHHHHHHHHH---hcCCCCCCEEEEeCCccHhHHHHHHHHHHhCCCEEEEC
Confidence 35666665541 232232 247899888776655444 458899999999988653 3345678889999999888
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEecCC
Q 010774 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 183 (501)
++. .++..+...++..++.+++.....+..+.... ......++.++..+..
T Consensus 217 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~~G~~ 272 (512)
T 3fce_A 217 DKDMIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASFSESMLPNMKTFLFCGEV 272 (512)
T ss_dssp CHHHHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTCSTTTSTTCCEEEECSSC
T ss_pred CHHHhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccccchhCccccEEEEecCc
Confidence 753 57888999999999999988776555443322 2233456666665544
No 50
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=63.28 E-value=70 Score=31.54 Aligned_cols=123 Identities=8% Similarity=-0.063 Sum_probs=81.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (501)
.++.+|++..- .|.+|. ...+|.+.+...+..++. ..++.++|++...+|-+-. .+..++.++..|+.++.+
T Consensus 141 ~~~~~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~~~~ 215 (511)
T 3e7w_A 141 KEHETFYIIYT--SGSTGNPKGVQISAANLQSFTDWICA---DFPVSGGKIFLNQAPFSFDLSVMDLYPCLQSGGTLHCV 215 (511)
T ss_dssp CTTSEEEEEEE--CCTTSSCEEEEEEHHHHHHHHHHHHH---HSTTTTTCEEEECSCTTSTHHHHHHHHHHHTTCEEEEC
T ss_pred CCCCeEEEEEC--CCCCCCCCEEEEcHHHHHHHHHHHHH---hcCCCccceEEEeCCccHHHHHHHHHHHHhcCCEEEEc
Confidence 35666665541 333332 247899888776665544 4578899999999886533 345578889999998877
Q ss_pred cCC--CCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEecCC
Q 010774 133 YDT--LGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~--~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 183 (501)
+.. .++..+...++..++..++.....+..+.... ......++.++..+..
T Consensus 216 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~l~~~~~~G~~ 271 (511)
T 3e7w_A 216 TKDAVNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGFSQDLLPHADTFMFCGEV 271 (511)
T ss_dssp CHHHHHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSC
T ss_pred ChhhhcCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccccccCCcccEEEEecCC
Confidence 653 57788889999999999988776655544322 2233456666665543
No 51
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=62.06 E-value=92 Score=31.63 Aligned_cols=121 Identities=13% Similarity=-0.031 Sum_probs=80.9
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHH-HHHHHHhcCCEEEE
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WII-AMEACNSQAITYVP 131 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~-~~lA~~~~G~~~v~ 131 (501)
++.+|++..- .|.+|. ...+|.+.+...+......+ ++.++|++...+|-+.. ... .+++++..|+.++.
T Consensus 183 ~~~~a~ii~T--SGSTG~PKgV~~th~~~~~~~~~~~~~~---~~~~~~~~l~~~p~~~~~~~~~~~~~~~l~~G~~~v~ 257 (617)
T 3rg2_A 183 ADEVAYFQLS--GGTTGTPKLIPRTHNDYYYSVRRSVEIC---QFTQQTRYLCAIPAAHNYAMSSPGSLGVFLAGGTVVL 257 (617)
T ss_dssp TTSEEEEEEC--CCSSSSCCEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECSCTTSHHHHHSSHHHHHHHHTCEEEE
T ss_pred CCCeEEEEEC--CCcCCCCCEeehhHHHHHHHHHHHHHhc---CCCCcceEEEeccchhhhhhhHHHHHHHHHcCCEEEE
Confidence 5667765540 222221 24789998887776665544 78899999999885433 332 47888888988887
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC-----ccCCCCccEEEEecCC
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL-----PRCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~ 183 (501)
.+. .+...+...++..++..+......+..+.+.. ...+..++.++.-+..
T Consensus 258 ~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~i~~gGe~ 313 (617)
T 3rg2_A 258 AAD-PSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGESRAQLASLKLLQVGGAR 313 (617)
T ss_dssp CSS-CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCCTTTTTTCCEEEEESSC
T ss_pred eCC-CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccccccCCCccEEEEcCCc
Confidence 654 57788888999999999998776555443321 1134567777766554
No 52
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=60.60 E-value=41 Score=33.22 Aligned_cols=122 Identities=9% Similarity=0.013 Sum_probs=80.8
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCC--CCCCEEEEEcCCchhHH--HHHHHHHhcCCEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGV--NPGDRCGIYGSNCPEWI--IAMEACNSQAITY 129 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv--~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~ 129 (501)
.|+.+|++..- .|.+|. ...+|.+.+...+..+.. ..++ .++|++...+|-.-.+- ..+++.+..|+.+
T Consensus 151 ~~~~~a~i~~T--SGTTG~PKgV~~sh~~~~~~~~~~~~---~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~ 225 (504)
T 1t5h_X 151 EPAQPAFIFYT--SGTTGLPKAAIIPQRAAESRVLFMST---QVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDGTY 225 (504)
T ss_dssp CTTSEEEEEEC--CC---CCCEEEEEGGGHHHHHHHHHH---TTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTCEE
T ss_pred CCCCeEEEEeC--CCCCCCCCEEEecHHHHHHHHHHHHH---hhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCceE
Confidence 46777776550 222221 246888888766655443 3467 78899888888654332 4578888999998
Q ss_pred EEecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC-----ccCCCCccEEEEecCC
Q 010774 130 VPLYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL-----PRCCLYLKTIVSFANV 183 (501)
Q Consensus 130 v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~-----~~~~~~~~~v~~~~~~ 183 (501)
+..+. .++..+...++..++.+++.....+..+.+.. ...+..++.++.-+..
T Consensus 226 v~~~~-~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~l~~lr~~~~gG~~ 283 (504)
T 1t5h_X 226 VVVEE-FRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAGSSLKLDSLRHVTFAGAT 283 (504)
T ss_dssp EECSS-CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTTCCCCCTTCCEEEECCTT
T ss_pred EeCCC-CCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhccccccccCccccEEEEcCCc
Confidence 88764 67889999999999999998776666554432 1134566776665543
No 53
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=60.57 E-value=50 Score=32.73 Aligned_cols=120 Identities=14% Similarity=0.023 Sum_probs=77.4
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--HHHHHHHhcCCEEEEe
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVPL 132 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l 132 (501)
|+.+|++..- .|.+|. ...+|.+.+...+..++.. .++.++|++...+|-.-.+- ..+++++ .|+.++.+
T Consensus 169 ~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~---~~~~~~d~~l~~~p~~~~~~~~~~~~~~~-~G~~~v~~ 242 (517)
T 3r44_A 169 GDDNLFIMYT--SGTTGHPKGVVHTHESVHSAASSWAST---IDVRYRDRLLLPLPMFHVAALTTVIFSAM-RGVTLISM 242 (517)
T ss_dssp TTSEEEEEEE--CC---CCEEEEEEHHHHHHHHHHHHHH---SCCCTTCEEEECSCTTSHHHHHHHHHHHH-HTCEEEEC
T ss_pred CCCeEEEEEC--CcccccCceeeeeHHHHHHHHHHHHHh---cCCCCCCEEEEeCchHHHHHHHHHHHHHh-cCeEEEEe
Confidence 4566665440 232232 2478999988777666554 48899999999888654332 2244555 88888776
Q ss_pred cCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEecCC
Q 010774 133 YDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 183 (501)
+ ..++..+...++..++..++.....+..+.+.. ......++.++.-+..
T Consensus 243 ~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~i~~gGe~ 295 (517)
T 3r44_A 243 P-QFDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAELDAPDFRYFITGGAP 295 (517)
T ss_dssp S-SCCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHHCCCTTCCEEEECSSC
T ss_pred C-CCCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcccccCCCCcccEEEECCCC
Confidence 4 578999999999999999998876655543321 1233456666665544
No 54
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=60.29 E-value=89 Score=31.40 Aligned_cols=123 Identities=7% Similarity=-0.109 Sum_probs=79.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--HHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|. ...+|.+ +....... .....++.++|++..++|-+-.+- ..+++.+..|+..+.
T Consensus 204 ~~~d~a~i~~T--SGTTG~PKgV~~sh~-~~~~~~~~--~~~~~~~~~~d~~~~~~p~~~~~~~~~~~~~~l~~G~~~~~ 278 (570)
T 3c5e_A 204 GSQEASAIYFT--SGTSGLPKMAEHSYS-SLGLKAKM--DAGWTGLQASDIMWTISDTGWILNILCSLMEPWALGACTFV 278 (570)
T ss_dssp BTTSEEEEEEC--CCSSSSCCEEEEEHH-HHHHHHHH--HTTTTSCCTTCEEEECCCTTSHHHHHHTTHHHHHHTCEEEE
T ss_pred CCCCcEEEEEC--CCCCCCCCEEEechH-HHHhhhhh--hhhhcCCCCCceEEEcCchHHHHHHHHHHHHHHHhCceEEE
Confidence 35667766550 222232 2467887 43311111 124468899999998888664433 356788888988887
Q ss_pred ecC-CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC--ccCCCCccEEEEecCC
Q 010774 132 LYD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCL--PRCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~-~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~ 183 (501)
... ..++..+...++..++..++.....+..+.+.. ......++.++..+..
T Consensus 279 ~~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~lr~i~~gGe~ 333 (570)
T 3c5e_A 279 HLLPKFDPLVILKTLSSYPIKSMMGAPIVYRMLLQQDLSSYKFPHLQNCVTVGES 333 (570)
T ss_dssp ECCSSCCHHHHHHHHHHSCCCEEEECHHHHHHHHTSCTTTCCCTTCCEEEEESSC
T ss_pred ecCCCCCHHHHHHHHHHhCCeEEeccHHHHHHHHhccccccccccceEEEEcCCc
Confidence 764 678999999999999999998876666554432 1123566777766554
No 55
>3tbh_A O-acetyl serine sulfhydrylase; cysteine synthase, type II PLP dependent enzyme, serine ACET transferase; HET: LLP; 1.68A {Leishmania donovani} PDB: 3spx_A* 3t4p_A* 4air_A*
Probab=59.94 E-value=45 Score=31.03 Aligned_cols=65 Identities=6% Similarity=0.006 Sum_probs=47.9
Q ss_pred HHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.+.| +++|+.|.+....+-.-..+.++|...|..++.+-|...+..-...++..++.+++++..
T Consensus 62 a~~~g~l~~g~~vvv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 127 (334)
T 3tbh_A 62 AEKEGKLIPGKSIVVESSSGNTGVSLAHLGAIRGYKVIITMPESMSLERRCLLRIFGAEVILTPAA 127 (334)
T ss_dssp HHHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCeEEEEeCCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 34555 488998655555566667777788888988877766666666677889999999999764
No 56
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=58.96 E-value=1.4e+02 Score=29.37 Aligned_cols=119 Identities=8% Similarity=-0.046 Sum_probs=75.0
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHH-HHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEA-CNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA-~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|. ...+|.+.+...+..+.. ..++.++|++...+|-.-.+ +..++. +...|..+++
T Consensus 158 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~---~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~g~~~~~ 232 (509)
T 3ivr_A 158 GAADGFVIIHT--AAVGGRPRGALISQGNLLIAQSSLVD---AWRLTEADVNLGMLPLFHVTGLGLMLTLQQAGGASVIA 232 (509)
T ss_dssp CTTSEEEEEEE--EC--CCEEEEEEEHHHHHHHHHHHHH---HTTCCTTCEEEECSCTTSHHHHHHHHHHHHHTCEEEEC
T ss_pred CccccEEEEeC--CCCCCCCcEEEEehHHHHHHHHHHHH---hhCCCCCcEEEEeCCCcchhHHHHHHHHHHhCCcEEEe
Confidence 45666665440 233332 247899988877666554 45889999999998865332 233334 4445544444
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC-ccCCCCccEEEEec
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILSCL-PRCCLYLKTIVSFA 181 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~v~~~~ 181 (501)
. ..+++.+...++..++.+++.....+..+.+.. ...+..++.++..+
T Consensus 233 -~-~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~l~~lr~~~~~g 281 (509)
T 3ivr_A 233 -A-KFDPAQAARDIEAHKVTVMAEFAPMLGNILDQAAPAQLASLRAVTGLD 281 (509)
T ss_dssp -S-SCCHHHHHHHHHHHTCCEEEEETTHHHHHHHHCCGGGGTTCCEEEEEC
T ss_pred -c-ccCHHHHHHHHHHHCCcEEEecHHHHHHHHhcccccchhhhheecccC
Confidence 3 678999999999999999998887766655433 22334555555444
No 57
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=58.56 E-value=67 Score=32.04 Aligned_cols=101 Identities=5% Similarity=-0.145 Sum_probs=74.6
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++....+ ....+|...+......+...+ ...++..+|++...++-..- .+..+++++..|+..+...
T Consensus 32 p~~~a~~~~~~~-----~~~~~Ty~el~~~~~~lA~~L--~~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~vpl~ 103 (541)
T 1v25_A 32 GRKEVVSRLHTG-----EVHRTTYAEVYQRARRLMGGL--RALGVGVGDRVATLGFNHFR-HLEAYFAVPGMGAVLHTAN 103 (541)
T ss_dssp TTCEEEEECTTS-----CEEEEEHHHHHHHHHHHHHHH--HHTTCCTTCEEEEECCSSHH-HHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEEecCC-----CCceecHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCcHH-HHHHHHHHHhcCcEEEecC
Confidence 456676543211 245789999988888776654 22377899999998887632 2345788999999998876
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 327 (501)
. ....+...++..++..+++.+.....+.
T Consensus 104 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 134 (541)
T 1v25_A 104 PRLSPKEIAYILNHAEDKVLLFDPNLLPLVE 134 (541)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHHHH
T ss_pred cccCHHHHHHHHHhCCCcEEEEChhHHHHHH
Confidence 5 7788889999999999999988766543
No 58
>3vc3_A Beta-cyanoalnine synthase; beta-cyanoalanine synthase, transferase; HET: C6P; 1.77A {Glycine max} PDB: 3vbe_A*
Probab=58.51 E-value=51 Score=30.80 Aligned_cols=70 Identities=9% Similarity=-0.013 Sum_probs=53.5
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 89 RFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 89 ~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.+...+--+++|++..+.....-.-..+.++|.++|..+..+-|...+.+-...++..++++++++..
T Consensus 73 ~i~~a~~~g~l~~g~~~Vv~aSsGN~g~alA~~aa~~G~~~~IvmP~~~~~~k~~~~~~~GA~Vv~v~~~ 142 (344)
T 3vc3_A 73 MITDAEEKNLITPGKTTLIEPTSGNMGISMAFMAAMKGYKMVLTMPSYTSLERRVTMRAFGAELILTDPA 142 (344)
T ss_dssp HHHHHHHTTCCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHHHHHcCCCCCCCCEEEEeCCcHHHHHHHHHHHHcCCcEEEEECCCChHHHHHHHHHcCCEEEEECCC
Confidence 3344333333688887677777777778888999999999887778777778888899999999998753
No 59
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=57.89 E-value=70 Score=31.93 Aligned_cols=106 Identities=8% Similarity=-0.094 Sum_probs=77.1
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++....+..+. ..-.+|...+......++..+. ..++..+|++...++-... .+..+++++..|+..+...
T Consensus 33 p~~~A~~~~~~~~~~~-~~~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~~-~~~~~lA~~~~G~~~vpl~ 108 (549)
T 3g7s_A 33 GEKTAIISAEPKFPSE-FPESMNFLEICEVTKKLASGIS--RKGVRKGEHVGVCIPNSID-YVMTIYALWRVAATPVPIN 108 (549)
T ss_dssp TTSEEEEEESSCCCCS-SCSEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSHH-HHHHHHHHHHTTCEEEECC
T ss_pred CCceEEEeCCCccccc-ccceeeHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCHH-HHHHHHHHHHhCCEEEccC
Confidence 5677777653221111 1246899999888887766542 2378899999999887642 3345788999999998876
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (501)
. ....+...++..+++.+++.+.....+..
T Consensus 109 ~~~~~~~l~~il~~~~~~~~i~~~~~~~~~~~ 140 (549)
T 3g7s_A 109 PMYKSFELEHILNDSEATTLVVHSMLYENFKP 140 (549)
T ss_dssp TTCCHHHHHHHHHHTTCSEEEEEGGGHHHHHH
T ss_pred CCCCHHHHHHHHHhcCCCEEEEChHHHHHHHH
Confidence 5 78888899999999999999887776544
No 60
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=57.18 E-value=29 Score=35.59 Aligned_cols=123 Identities=10% Similarity=0.056 Sum_probs=84.5
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l 132 (501)
.|+.+|++..- .|.+|. -..+|.+.+...+.. ....++.++|++....+-+-+ .+..+++.+..|+.++..
T Consensus 162 ~~~d~a~iiyT--SGSTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 235 (620)
T 4dg8_A 162 AADQIAYINFS--SGTTGRPKAIACTHAGITRLCLG----QSFLAFAPQMRFLVNSPLSFDAATLEIWGALLNGGCCVLN 235 (620)
T ss_dssp CTTSEEEEEEE--BSSSSSCEEEEEEHHHHHHHHSS----CGGGTTCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CCccccCeEEEEchHHHHHHHHH----HHhhCCCCCCEEEEECccCHHHHHHHHHHHHhcCCEEEeC
Confidence 46777766551 233332 246788877543322 233578899999999886543 344578888899888776
Q ss_pred c-CCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCC
Q 010774 133 Y-DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS 184 (501)
Q Consensus 133 ~-~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (501)
+ ...+++.+...++..++..++.....+..+.+........++.++.-+..-
T Consensus 236 ~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~l~~lr~v~~gGe~l 288 (620)
T 4dg8_A 236 DLGPLDPGVLRQLIGERGADSAWLTASLFNTLVDLDPDCLGGLRQLLTGGDIL 288 (620)
T ss_dssp CSSSCCHHHHHHHHHTTCCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCC
T ss_pred ccccCCHHHHHHHHHHhCCcEEEccHHHHHHHHhcChhhCCCccEEEEEeCcC
Confidence 4 356889999999999999999887776666555555566778887776543
No 61
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=57.14 E-value=50 Score=32.90 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=76.3
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
.++.++++... +| -.+|...+......+...+. ..++..+|++...++-... .+..+++++..|+..+..
T Consensus 35 ~p~~~a~~~~~---~~----~~~Ty~el~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~~-~~~~~la~~~~Gav~vpl 104 (536)
T 3ni2_A 35 HSSKPCLINGA---NG----DVYTYADVELTARRVASGLN--KIGIQQGDVIMLFLPSSPE-FVLAFLGASHRGAIITAA 104 (536)
T ss_dssp STTSEEEEETT---TC----CEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSHH-HHHHHHHHHHHTCEEEEC
T ss_pred CCCceEEEECC---CC----CEEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEcCCcHH-HHHHHHHHHHhCCEEecc
Confidence 35777766432 22 35899999888887766542 2378899999998887632 334578899999998887
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecchHHHHHHHH
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIYTG 329 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~ 329 (501)
.. ....+...++..++..+++.+.....+...
T Consensus 105 ~~~~~~~~l~~~l~~~~~~~~i~~~~~~~~~~~~ 138 (536)
T 3ni2_A 105 NPFSTPAELAKHAKASRAKLLITQACYYEKVKDF 138 (536)
T ss_dssp CTTCCHHHHHHHHHHHTEEEEEECGGGTHHHHHH
T ss_pred CCCCCHHHHHHHHHhcCCEEEEEChHHHHHHHHH
Confidence 65 788888999999999999988877766543
No 62
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=57.02 E-value=23 Score=35.77 Aligned_cols=123 Identities=7% Similarity=-0.006 Sum_probs=85.9
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCch-hHHHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCP-EWIIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~-~~~~~~lA~~~~G~~~v~l 132 (501)
.|+.+|++..- .|.+|. ...+|.+.+...... ....++.++|++..++|-+. -....+++.+..|+.++..
T Consensus 212 ~~~d~a~i~~T--SGTTG~PKgV~~th~~l~~~~~~----~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~l~~G~~~v~~ 285 (570)
T 4gr5_A 212 GPEDVACVMFT--SGSTGRPKGVMSPHRALTGTYLG----QDYAGFGPDEVFLQCSPVSWDAFGLELFGALLFGARCVLQ 285 (570)
T ss_dssp CTTSEEEEECC--SSCCSSCCCEEEEHHHHHHHHSS----CCSSCCSTTCEEEECSCTTSSTHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEEC--CcCCCCCeEEEEecHHHHHHHHh----hhhcCCCCCCEEEEecCccHHHHHHHHHHHHhcCCEEEEc
Confidence 46777776550 222221 247888887543221 22347889999999988643 3455678888899988877
Q ss_pred cC-CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCCC
Q 010774 133 YD-TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANVS 184 (501)
Q Consensus 133 ~~-~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 184 (501)
.. ...+..+...++..++..++.....+..+.+.....+..++.++.-+...
T Consensus 286 ~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~lr~~~~gG~~l 338 (570)
T 4gr5_A 286 SGQNPDPLEIGELVARHGVTMLQLSASLFNFLVDEVPEAFEGVRYAITGGEPA 338 (570)
T ss_dssp SSSSCCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCGGGGTTCSEEEEESSCC
T ss_pred CCccCCHHHHHHHHHHcCCcEEEecHHHHHHHHhhchhhCCCceEEEEecccC
Confidence 64 56888999999999999999988777777666666667788887776543
No 63
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=52.71 E-value=1.1e+02 Score=29.68 Aligned_cols=106 Identities=9% Similarity=-0.037 Sum_probs=76.0
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.........-....+|...+......++..+.. .+. .+|++...++-..- .+..+++++..|+..+...
T Consensus 38 pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~--~g~-~gd~V~i~~~n~~e-~~~~~lA~~~~G~v~vpl~ 113 (480)
T 3t5a_A 38 PHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSR--CGS-TGDRVVISAPQGLE-YVVAFLGALQAGRIAVPLS 113 (480)
T ss_dssp TTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTT--SSC-TTCEEEEECCSSHH-HHHHHHHHHHTTCEEEEEC
T ss_pred CCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHh--cCC-CCCEEEEEcCCcHH-HHHHHHHHHHhCcEEEeeC
Confidence 5777877654221111234689999999998888776522 244 88999888877643 2345788999999988774
Q ss_pred C-----CHHHHHHHHhhhcCcEEEecchHHHHHHH
Q 010774 299 G-----DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (501)
Q Consensus 299 ~-----~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (501)
. ....+...++..++..+++.+.....+.+
T Consensus 114 ~~~~~~~~~~l~~il~~~~~~~vi~~~~~~~~~~~ 148 (480)
T 3t5a_A 114 VPQGGVTDERSDSVLSDSSPVAILTTSSAVDDVVQ 148 (480)
T ss_dssp SCCSCTTCCHHHHHHHHHCCSEEEECTTTHHHHHH
T ss_pred CCCccchHHHHHHHHHhCCCCEEEeChhHHHHHHH
Confidence 3 46788889999999999999887776654
No 64
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=49.38 E-value=97 Score=31.06 Aligned_cols=95 Identities=8% Similarity=-0.015 Sum_probs=70.9
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.. ...+|...+......+...+. ..++..+|++...++-... .+..+++++..|+..+...
T Consensus 53 p~~~Al~~~---------~~~~Ty~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~n~~e-~~~~~lA~~~~Gav~vpl~ 120 (563)
T 1amu_A 53 PNNVAIVCE---------NEQLTYHELNVKANQLARIFI--EKGIGKDTLVGIMMEKSID-LFIGILAVLKAGGAYVPID 120 (563)
T ss_dssp TTSEEEEET---------TEEEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSSHH-HHHHHHHHHHTTCEEEECC
T ss_pred CCCeEEEeC---------CceecHHHHHHHHHHHHHHHH--HcCCCCCCEEEEEeCCCHH-HHHHHHHHHHhCCEEEEeC
Confidence 466676631 246899999888877766442 2377899999988887642 2345788999999998876
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDR 325 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~ 325 (501)
. ....+...++..++..+++.+.....
T Consensus 121 ~~~~~~~l~~il~~~~~~~li~~~~~~~~ 149 (563)
T 1amu_A 121 IEYPKERIQYILDDSQARMLLTQKHLVHL 149 (563)
T ss_dssp TTSCHHHHHHHHHHHTCSEEEECGGGHHH
T ss_pred CCCcHHHHHHHHHhcCCCEEEEcCchhhh
Confidence 5 77888889999999999998876543
No 65
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=48.79 E-value=78 Score=29.28 Aligned_cols=77 Identities=16% Similarity=0.090 Sum_probs=52.8
Q ss_pred EeeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIRFG---SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+......... +.|...++++||+|+|+...+.-.+++++|....|+.++.++.. ++. ..+.+..++..+
T Consensus 136 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~--~~r-~~~~~~~Ga~~~ 212 (348)
T 4eez_A 136 GLDPIEASSITCAGVTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDIN--QDK-LNLAKKIGADVT 212 (348)
T ss_dssp TSCHHHHHHHHHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESC--HHH-HHHHHHTTCSEE
T ss_pred CCCHHHHhhcccceeeEEeeecccCCCCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECc--HHH-hhhhhhcCCeEE
Confidence 367777554433332 23555689999999999988888888888877778877777643 333 345667788777
Q ss_pred EEc
Q 010774 154 FVQ 156 (501)
Q Consensus 154 l~~ 156 (501)
+-.
T Consensus 213 i~~ 215 (348)
T 4eez_A 213 INS 215 (348)
T ss_dssp EEC
T ss_pred EeC
Confidence 643
No 66
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=48.15 E-value=1e+02 Score=31.71 Aligned_cols=100 Identities=15% Similarity=0.152 Sum_probs=73.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
.++.+|++.... .+| ....+|...|......++..+. ...+...+|++...+|...- .+..+++++..|+..+..
T Consensus 95 ~pd~~Al~~~~~-~~~--~~~~~TY~eL~~~v~~lA~~L~-~~~Gv~~Gd~V~i~~~~~~e-~v~a~lA~~~~Gav~vpl 169 (663)
T 1ry2_A 95 TPNKKAIIFEGD-EPG--QGYSITYKELLEEVCQVAQVLT-YSMGVRKGDTVAVYMPMVPE-AIITLLAISRIGAIHSVV 169 (663)
T ss_dssp CTTSEEEEEECS-STT--CCEEEEHHHHHHHHHHHHHHHH-HTSCCCTTCEEEECCCSSHH-HHHHHHHHHHTTCEEEEC
T ss_pred CCCceEEEEEcC-CCC--ceEEEEHHHHHHHHHHHHHHHH-HhcCCCCCCEEEEEcCCCHH-HHHHHHHHHHcCCEEEee
Confidence 357778775432 122 2357899999988888776552 02378899999999998743 334588999999998877
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecchH
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVPRV 322 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~ 322 (501)
.. .+..+...++..++.++++....
T Consensus 170 ~~~~~~~~l~~~l~~~~~~~li~~~~~ 196 (663)
T 1ry2_A 170 FAGFSSNSLRDRINDGDSKVVITTDES 196 (663)
T ss_dssp CTTSCHHHHHHHHHHHTCSEEEEESBC
T ss_pred CCCCCHHHHHHHHHhcCCeEEEEcccc
Confidence 64 88899999999999999987654
No 67
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=47.85 E-value=96 Score=31.25 Aligned_cols=123 Identities=9% Similarity=-0.188 Sum_probs=77.4
Q ss_pred CCCCcceEEeeccCCCCCccE--EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--HHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGPYV--WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~~~--~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|..+ .+|...+.... .......++.++|++....+...... ..+++.+..|+.++.
T Consensus 223 ~~~d~a~i~~T--SGTTG~PKgV~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 297 (580)
T 3etc_A 223 KNEDICLVYFS--SGTAGFPKMVEHDNTYPLGHI---LTAKYWQNVEDDGLHYTVADSGWGKCVWGKLYGQWIAGCAVFV 297 (580)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEETTHHHHHH---HHHHTTSCCCTTCEEEECCCTTSTHHHHHTTHHHHHTTCEEEE
T ss_pred CCCCcEEEEEe--CCCCCCccEEEeccHHHHHHH---HHHHHhhCCCCCceEEEeCChHHHHHHHHHHHHHHhCCcEEEE
Confidence 45666665541 33333322 45555433322 22222357889999888887664433 347888999999888
Q ss_pred ec-CCCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc--cCCCCccEEEEecCC
Q 010774 132 LY-DTLGANAVEFIINHAEVSIAFVQENKIPSILSCLP--RCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~-~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~ 183 (501)
.+ ....++.+...++..++..++.....+..+.+... ..+..++.++..+..
T Consensus 298 ~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~l~~lr~i~~gGe~ 352 (580)
T 3etc_A 298 YDYDRFEAKNMLEKASKYGVTTFCAPPTIYRFLIKEDLSHYNFSTLKYAVVAGEP 352 (580)
T ss_dssp EECSSCCHHHHHHHHHHHTCCEEEECHHHHHHHHTSCC---CCTTCCEEEECSSC
T ss_pred ecCCCCCHHHHHHHHHHHCCeEEEccHHHHHHHHhcccccCCCccceEEEEccCC
Confidence 76 57789999999999999999987766655544321 123566777666554
No 68
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=45.69 E-value=81 Score=27.10 Aligned_cols=77 Identities=14% Similarity=0.065 Sum_probs=0.0
Q ss_pred HHHHHHH-HHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEEEe------cchH--HHHHHHHHHHHhhcCChhHHHHH
Q 010774 277 HIYDQII-ETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMFSG------VPRV--YDRIYTGISNKISSGGALSKKLF 345 (501)
Q Consensus 277 ~~~g~~~-~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~~~------~P~~--~~~l~~~~~~~~~~~~~~~~~~~ 345 (501)
|..|..+ ...--..|..++.... .+..+++.+.+++++.+.. ++++ +..+++.+...
T Consensus 105 HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~~~~~~~~~~i~~l~~~------------ 172 (215)
T 3ezx_A 105 HDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMTTSMLGQKDLMDRLNEE------------ 172 (215)
T ss_dssp CCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSHHHHTHHHHHHHHHHHT------------
T ss_pred hHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhcccCcHHHHHHHHHHHHHc------------
Q ss_pred HHHHHHHhhhhccCCCCCCcchhHHHHHHHHHHHHhCCce---eEEEEecCCCCHHHHHHH
Q 010774 346 EFAYNYKLGNMKKGMPQNKAAPLLDSLVFSKIREAFGGRL---QAMLSGAAPLPIHVEEFL 403 (501)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l---r~~~~gG~~~~~~~~~~~ 403 (501)
.+ -.+++||.+++++..+.+
T Consensus 173 --------------------------------------~~~~~v~v~vGG~~~~~~~a~~i 195 (215)
T 3ezx_A 173 --------------------------------------KLRDSVKCMFGGAPVSDKWIEEI 195 (215)
T ss_dssp --------------------------------------TCGGGSEEEEESSSCCHHHHHHH
T ss_pred --------------------------------------CCCCCCEEEEECCCCCHHHHHHh
No 69
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=44.50 E-value=68 Score=28.77 Aligned_cols=78 Identities=15% Similarity=0.138 Sum_probs=55.8
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcC
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 126 (501)
..+++..+.-|+...+.+. |....++-..|..++.+++.+.+..|.+.|+ ...++.-|+...+..--.-....
T Consensus 19 tv~~~i~~~lP~~~~iy~~---D~a~~PYG~ks~~~i~~~~~~~~~~L~~~g~----~~IVIACNTa~~~al~~lr~~~~ 91 (269)
T 3ist_A 19 TVVREVLKQLPHEQVYYLG---DTARCPYGPRDKEEVAKFTWEMTNFLVDRGI----KMLVIACNTATAAALYDIREKLD 91 (269)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CGGGCCCTTSCHHHHHHHHHHHHHHHHHTTC----SEEEECCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHCCCCcEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCCccHHHHHHHHHhcC
Confidence 5566667789999998887 7766677788999999999999999998865 46666667766532222222345
Q ss_pred CEEEE
Q 010774 127 ITYVP 131 (501)
Q Consensus 127 ~~~v~ 131 (501)
..++-
T Consensus 92 iPvig 96 (269)
T 3ist_A 92 IPVIG 96 (269)
T ss_dssp SCEEE
T ss_pred CCEEe
Confidence 55554
No 70
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=43.07 E-value=1.2e+02 Score=30.95 Aligned_cols=123 Identities=11% Similarity=-0.039 Sum_probs=80.3
Q ss_pred CCCcceEEeeccCCCCCcc--EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH--HHHHHHHhcCCEEEEe
Q 010774 57 PNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI--IAMEACNSQAITYVPL 132 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~--~~~lA~~~~G~~~v~l 132 (501)
++.++++..- .|.+|.. ..+|.+.+...+..... ...+++++|++....+-+...- ..+++.+..|++.+..
T Consensus 255 ~~d~a~ilyT--SGTTG~PKgV~~sh~~~~~~~~~~~~--~~~~~~~~d~~l~~~~~~~~~g~~~~~~~~L~~G~t~vl~ 330 (652)
T 1pg4_A 255 AEDPLFILYT--SGSTGKPKGVLHTTGGYLVYAATTFK--YVFDYHPGDIYWCTADVGWVTGHSYLLYGPLACGATTLMF 330 (652)
T ss_dssp TTSEEEEEEE--CCSSSSCEEEEEESHHHHHHHHHHHH--HHTTCCTTCEEEECSCTTSHHHHHHTTHHHHHTTCEEEEE
T ss_pred CCCCEEEEec--cCCCCCCceEEECchHHHHHHHHHHH--HhcCCCCCCEEEEccCCeeeechHHHHHHHHHcCceEEEE
Confidence 5666665541 2333322 36787776544422211 2357889999988888654433 4567899999999888
Q ss_pred cCC---CCHHHHHHHHHhcCceEEEEcCCChhhhhhcCc-----cCCCCccEEEEecCC
Q 010774 133 YDT---LGANAVEFIINHAEVSIAFVQENKIPSILSCLP-----RCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~~---~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~~ 183 (501)
+.. .++..+..+++..++.++++....+..+.+... ..+..++.++..+..
T Consensus 331 ~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~~~~~l~sLr~i~~gGe~ 389 (652)
T 1pg4_A 331 EGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKAIEGTDRSSLRILGSVGEP 389 (652)
T ss_dssp CSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGGTTTCCCTTCCEEEEESSC
T ss_pred CCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccccccCCcCceEEEEEecCC
Confidence 642 478899999999999999988776665544322 134567777776654
No 71
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=41.21 E-value=75 Score=29.92 Aligned_cols=60 Identities=12% Similarity=-0.046 Sum_probs=40.4
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecC-----CCCHHHHHHHHHhcC--ceEEEE
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD-----TLGANAVEFIINHAE--VSIAFV 155 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~-----~~~~~~l~~~l~~~~--~~~vl~ 155 (501)
.|...++++||.|.+-.+....+ .-++...|+.++.++. ..+.+++...+...+ +++|+.
T Consensus 69 al~~l~~~~Gd~Vi~~~~~~~~~---~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~~~~tk~v~~ 135 (377)
T 3ju7_A 69 AIQLKKRKKGKYALMPSFTFPAT---PLAAIWCGLEPYFIDISIDDWYMDKTVLWDKIEELKEEVAIVVP 135 (377)
T ss_dssp HHHHHSCTTCCEEEEESSSCTHH---HHHHHHTTCEEEEECBCTTTCSBCHHHHHHHHHHHGGGEEEECC
T ss_pred HHHHcCCCCcCEEEECCCCcHHH---HHHHHHcCCEEEEEecCCccCCcCHHHHHHHHhcCCCCceEEEE
Confidence 34445788999998887766554 3456678988766653 247788888774444 677764
No 72
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=40.09 E-value=7.6 Score=39.57 Aligned_cols=30 Identities=27% Similarity=0.318 Sum_probs=25.6
Q ss_pred CCCCeEEEEecCCCC-CCCceEEeecHHHHH
Q 010774 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVA 247 (501)
Q Consensus 218 ~~~~~~~i~~TSGtT-G~PK~v~~sh~~l~~ 247 (501)
.++.+..+.-||||| |.||-+.+|...+-.
T Consensus 97 ~~~~i~~f~~SSGTT~gk~K~IP~t~~~l~~ 127 (609)
T 4b2g_A 97 SAHPISEFLTSSGTSAGERKLMPTIQEELDR 127 (609)
T ss_dssp CSSCCCEEEEEEEEETTEEEEEEECTTHHHH
T ss_pred CCCCCCeEEeCCCCCCCCceeeecCHHHHHH
Confidence 456677899999999 889999999997655
No 73
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=39.23 E-value=87 Score=31.01 Aligned_cols=98 Identities=4% Similarity=-0.132 Sum_probs=73.3
Q ss_pred CCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEec
Q 010774 219 KTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWR 298 (501)
Q Consensus 219 ~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~ 298 (501)
++.++++.. | ..+|...+......+...+ ...++..+|++...++-... .+..+++++..|+..+...
T Consensus 37 p~~~A~~~~-----~----~~~Ty~el~~~~~~lA~~L--~~~Gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~vpl~ 104 (529)
T 2v7b_A 37 AGKTAYIDD-----T----GSTTYGELEERARRFASAL--RTLGVHPEERILLVMLDTVA-LPVAFLGALYAGVVPVVAN 104 (529)
T ss_dssp TTSEEEECS-----S----CEEEHHHHHHHHHHHHHHH--HHTTCCTTCEEEEECCSSTH-HHHHHHHHHHHTCEEEECC
T ss_pred CCceEEEeC-----C----CCccHHHHHHHHHHHHHHH--HHcCCCCCCEEEEEcCCcHH-HHHHHHHHHHcCceEEecC
Confidence 566676532 1 3589999988888776654 22367889999998887643 2345788899999988776
Q ss_pred C--CHHHHHHHHhhhcCcEEEecchHHHHHHH
Q 010774 299 G--DVRYLMEDIQELKPTMFSGVPRVYDRIYT 328 (501)
Q Consensus 299 ~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~ 328 (501)
. ....+...++..++..+++.+.....+..
T Consensus 105 ~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~~ 136 (529)
T 2v7b_A 105 TLLTPADYVYMLTHSHARAVIASGALVQNVTQ 136 (529)
T ss_dssp TTCCHHHHHHHHHHHTCSEEEEEGGGHHHHHH
T ss_pred cccCHHHHHHHHhccCCeEEEechhhhhHHHH
Confidence 5 78889999999999999998887765543
No 74
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=39.11 E-value=1.2e+02 Score=30.30 Aligned_cols=122 Identities=12% Similarity=0.007 Sum_probs=77.9
Q ss_pred CCCcceEEeeccC-CCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEE
Q 010774 57 PNNQMLGGRKVSD-GKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (501)
Q Consensus 57 p~~~al~~~~~~~-~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (501)
|+.+|++.. . |.+|. ...+|.+.+...+..+... ..++.++|++...+|-.-. +...+++.+..|+.++.
T Consensus 175 ~~d~a~i~~---TSGTTG~PKgV~~sh~~~~~~~~~~~~~--~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~g~~~~~ 249 (576)
T 3gqw_A 175 PNDIAYLQY---TSGSTRFPRGVIITHREVMANLRAISHD--GIKLRPGDRCVSWLPFYHDMGLVGFLLTPVATQLSVDY 249 (576)
T ss_dssp TTSEEEEEC---TTSCSSSCCCEEEEHHHHHHHHHHHHHT--TSCCCTTCCEEECCCTTSHHHHHHHTHHHHHTTCCEEE
T ss_pred CCCeEEEEe---CCCCCCCCceEEeeHHHHHHHHHHhhhc--ccCCCCcceEEEcCCccccccHHHHHHHHHhcCceEEE
Confidence 567777665 3 22221 2578999887665544321 2588999999998886543 34457778888888877
Q ss_pred ecC---CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcC------ccCCCCccEEEEecCC
Q 010774 132 LYD---TLGANAVEFIINHAEVSIAFVQENKIPSILSCL------PRCCLYLKTIVSFANV 183 (501)
Q Consensus 132 l~~---~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~------~~~~~~~~~v~~~~~~ 183 (501)
+.+ ...+..+...++..++.+++.....+..+.+.. ...+..++.++.-+..
T Consensus 250 ~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~~~~~~l~~lr~~~~gg~~ 310 (576)
T 3gqw_A 250 LRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEKDLAELDLSCWRVAGIGAEP 310 (576)
T ss_dssp CCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHHHHTTCCCTTCCEEEECSSC
T ss_pred cchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhcccccccCChhhhHhhhccCcc
Confidence 764 246778889999999999887664443322211 1223455666655543
No 75
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=38.56 E-value=98 Score=28.67 Aligned_cols=74 Identities=11% Similarity=-0.037 Sum_probs=48.4
Q ss_pred EeeHHHHHHHHHHH---HHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIRF---GSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~~---A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+........ -+.|.+.++++|++|+|.....+-.+++.+|- ..|+.++.+..... .+. .++..+++.+
T Consensus 149 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~~~~--~~~-~~~~lGa~~v 224 (348)
T 3two_A 149 NAPLEKVAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAV-AMGAEVSVFARNEH--KKQ-DALSMGVKHF 224 (348)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEESCSHHHHHHHHHHH-HTTCEEEEECSSST--THH-HHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCeEEEEeCCHH--HHH-HHHhcCCCee
Confidence 36777765322221 23466678999999999987666777666665 56887777665432 332 4566888888
Q ss_pred E
Q 010774 154 F 154 (501)
Q Consensus 154 l 154 (501)
+
T Consensus 225 ~ 225 (348)
T 3two_A 225 Y 225 (348)
T ss_dssp E
T ss_pred c
Confidence 7
No 76
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=37.93 E-value=50 Score=29.60 Aligned_cols=25 Identities=16% Similarity=0.158 Sum_probs=21.1
Q ss_pred HHHHHHHHhCCCCCCCEEEEEcCCc
Q 010774 88 IRFGSAMRSRGVNPGDRCGIYGSNC 112 (501)
Q Consensus 88 ~~~A~~L~~~gv~~gd~V~i~~~n~ 112 (501)
..+.+.|+++||++||.|.+...-+
T Consensus 18 ~~l~~~L~~LGi~~Gd~llVHsSl~ 42 (268)
T 3ijw_A 18 KTITNDLRKLGLKKGMTVIVHSSLS 42 (268)
T ss_dssp HHHHHHHHHHTCCTTCEEEEEECTG
T ss_pred HHHHHHHHHcCCCCCCEEEEEechH
Confidence 4567789999999999999998753
No 77
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=37.10 E-value=69 Score=34.81 Aligned_cols=100 Identities=14% Similarity=0.052 Sum_probs=74.8
Q ss_pred CCCCeEEEEecCCCCCCCceEEeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEe
Q 010774 218 KKTNISTIMYTSGTTGEPKGVVLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFW 297 (501)
Q Consensus 218 ~~~~~~~i~~TSGtTG~PK~v~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~ 297 (501)
.++.++++... +| ..+|...+......+...+ ...++..+|++...+|-.. -.+..+++++..|+..+..
T Consensus 74 ~pd~~Al~~~~---~~----~~~TY~eL~~~~~~lA~~L--~~~Gv~~gd~V~i~~~ns~-e~~v~~lA~~~~Ga~~vpl 143 (979)
T 3tsy_A 74 FATKPCLINGP---TG----HVYTYSDVHVISRQIAANF--HKLGVNQNDVVMLLLPNCP-EFVLSFLAASFRGATATAA 143 (979)
T ss_dssp TTTSEEEEETT---TC----CEEEHHHHHHHHHHHHHHH--HHTTCCTTCEEEEECSSCH-HHHHHHHHHHHHTCEEEEE
T ss_pred CCCCeEEEECC---CC----cEEEHHHHHHHHHHHHHHH--HHcCCCCcCEEEEEeCCCH-HHHHHHHHHHHcCCEEEee
Confidence 35777876532 22 4689999988888776654 2237889999999988763 2334578899999999887
Q ss_pred cC--CHHHHHHHHhhhcCcEEEecchHHHHHH
Q 010774 298 RG--DVRYLMEDIQELKPTMFSGVPRVYDRIY 327 (501)
Q Consensus 298 ~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~ 327 (501)
.. .+..+...++..++.++++.+.....+.
T Consensus 144 ~~~~~~~~l~~~l~~~~~~~vi~~~~~~~~~~ 175 (979)
T 3tsy_A 144 NPFFTPAEIAKQAKASNTKLIITEARYVDKIK 175 (979)
T ss_dssp CTTSCHHHHHHHHHHHTEEEEEECSTTTTTSH
T ss_pred CCCCCHHHHHHHHHHcCCeEEEEChHHHHHHH
Confidence 65 7888889999999999999887665543
No 78
>2q3b_A Cysteine synthase A; pyridoxal-5'-phosphate, sulphur metabolism, cysteine biosynthesis, transferase; HET: LLP; 1.80A {Mycobacterium tuberculosis} PDB: 2q3c_A* 2q3d_A* 3rr2_A
Probab=37.02 E-value=1.9e+02 Score=26.33 Aligned_cols=64 Identities=8% Similarity=0.055 Sum_probs=43.4
Q ss_pred HHhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 94 MRSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 94 L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.+.| +++|+.|+. ...+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 58 a~~~g~~~~g~~vv~-assGN~g~alA~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 122 (313)
T 2q3b_A 58 AEQAGLIKPDTIILE-PTSGNTGIALAMVCAARGYRCVLTMPETMSLERRMLLRAYGAELILTPGA 122 (313)
T ss_dssp HHHTTCCCTTCEEEE-ECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEeCCC
Confidence 34455 467777655 44444445556667789988877666555556667788999999998763
No 79
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=36.81 E-value=87 Score=30.81 Aligned_cols=85 Identities=14% Similarity=0.064 Sum_probs=66.7
Q ss_pred EeecHHHHHHHhhcceeeeeccccCCCCcEEEEecChHHHHHHHHHHHHHhcCcEEEEecC--CHHHHHHHHhhhcCcEE
Q 010774 239 VLTNQAIVAEVLSVDQMFVVTGKVCSEEDTYFSFLPLAHIYDQIIETHCIHKGCSIGFWRG--DVRYLMEDIQELKPTMF 316 (501)
Q Consensus 239 ~~sh~~l~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~l~~G~~~~~~~~--~~~~~~~~i~~~~~t~~ 316 (501)
.+|...+......++..+. ..++..+|++...++-.. -.+..+++++..|+..+.... ....+...++..++..+
T Consensus 28 ~~Ty~eL~~~~~~lA~~L~--~~Gv~~gd~V~i~~~~~~-~~~~~~lA~~~~Ga~~vpl~~~~~~~~l~~il~~~~~~~v 104 (503)
T 4fuq_A 28 KISYAELVARAGRVANVLV--ARGLQVGDRVAAQTEKSV-EALVLYLATVRAGGVYLPLNTAYTLHELDYFITDAEPKIV 104 (503)
T ss_dssp EEEHHHHHHHHHHHHHHHH--HTTCCTTCEEEEECCSCH-HHHHHHHHHHHTTCEEEECCTTCCHHHHHHHHHHHCCSEE
T ss_pred EEEHHHHHHHHHHHHHHHH--HcCCCCCCEEEEECCCCH-HHHHHHHHHHHcCcEEEecCCCCCHHHHHHHHHhcCCcEE
Confidence 5899999888887766542 237889999999888763 233458889999999888765 78888899999999999
Q ss_pred EecchHHHHH
Q 010774 317 SGVPRVYDRI 326 (501)
Q Consensus 317 ~~~P~~~~~l 326 (501)
++.+.....+
T Consensus 105 i~~~~~~~~~ 114 (503)
T 4fuq_A 105 VCDPSKRDGI 114 (503)
T ss_dssp EECGGGTTTT
T ss_pred EECchhhHHH
Confidence 9988765543
No 80
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=36.49 E-value=2.7e+02 Score=27.19 Aligned_cols=103 Identities=9% Similarity=-0.044 Sum_probs=70.3
Q ss_pred CCCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh--HHHHHHHHHhcCCEEEE
Q 010774 56 IPNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE--WIIAMEACNSQAITYVP 131 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~--~~~~~lA~~~~G~~~v~ 131 (501)
.++.+|++..- .|.+|. ...+|.+.+...+..++..+ ++.++|++...+|..-. ++..+++.+..|+.++.
T Consensus 153 ~~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~---~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~ 227 (505)
T 3nyq_A 153 DDGDPALVVYT--SGTTGPPKGAVIPRRALATTLDALADAW---QWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRH 227 (505)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHHHHHHHHHH---TCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEE
T ss_pred CCCCeEEEEeC--CCCcCCCCeEEEeHHHHHHHHHHHHHHh---CCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEE
Confidence 45667765541 233332 24789999988887776655 78899999888885422 33457888899998887
Q ss_pred ecCCCCHHHHHHHHHhcCceEEEEcCCChhhhhh
Q 010774 132 LYDTLGANAVEFIINHAEVSIAFVQENKIPSILS 165 (501)
Q Consensus 132 l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~ 165 (501)
+. ...++.+...+ ..++..++.....+..+.+
T Consensus 228 ~~-~~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~ 259 (505)
T 3nyq_A 228 LG-RFSTEGAAREL-NDGATMLFGVPTMYHRIAE 259 (505)
T ss_dssp CS-SCCHHHHHHHH-TTTCCEEEECHHHHHHHHH
T ss_pred CC-CCChHHHHHHH-hhCCeEEEehHHHHHHHHH
Confidence 64 56777777777 6788888877665554433
No 81
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=36.48 E-value=1.1e+02 Score=28.46 Aligned_cols=78 Identities=13% Similarity=0.033 Sum_probs=50.3
Q ss_pred EeeHHHHH---HHHH---HHHHHHHh--CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhc
Q 010774 77 WLTYQEVY---DAAI---RFGSAMRS--RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA 148 (501)
Q Consensus 77 ~~Ty~el~---~~v~---~~A~~L~~--~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~ 148 (501)
.+++.+.. .... ..-+.|.+ .++++|++|+|.....+-.+++.+|-...|+.++.++. +++.+ ..++..
T Consensus 154 ~~~~~~aa~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~--~~~~~-~~~~~l 230 (359)
T 1h2b_A 154 DISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV--KEEKL-KLAERL 230 (359)
T ss_dssp TCCHHHHHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--SHHHH-HHHHHT
T ss_pred CCCHHHHhhccchhhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeC--CHHHH-HHHHHh
Confidence 36777754 1111 12234556 78999999999999777777777776554877666654 33444 345678
Q ss_pred CceEEEEcC
Q 010774 149 EVSIAFVQE 157 (501)
Q Consensus 149 ~~~~vl~~~ 157 (501)
+++.++-..
T Consensus 231 Ga~~vi~~~ 239 (359)
T 1h2b_A 231 GADHVVDAR 239 (359)
T ss_dssp TCSEEEETT
T ss_pred CCCEEEecc
Confidence 888777543
No 82
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=36.13 E-value=1.2e+02 Score=27.81 Aligned_cols=77 Identities=9% Similarity=0.059 Sum_probs=50.4
Q ss_pred EeeHHHHHHHHHH---HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIR---FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~---~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+....... ..+.|...++++|++|+|.....+-.+++.+|- ..|+.++.++. +++.+ ..++..++..+
T Consensus 139 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~ 214 (340)
T 3s2e_A 139 KVGFVEIAPILCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVAVQYAR-AMGLRVAAVDI--DDAKL-NLARRLGAEVA 214 (340)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCTTSEEEEECCSTTHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSEE
T ss_pred CCCHHHhhcccchhHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCeEEEEeC--CHHHH-HHHHHcCCCEE
Confidence 4677776533222 123455668999999999988667777776666 46887776654 34444 35677888877
Q ss_pred EEcC
Q 010774 154 FVQE 157 (501)
Q Consensus 154 l~~~ 157 (501)
+-..
T Consensus 215 i~~~ 218 (340)
T 3s2e_A 215 VNAR 218 (340)
T ss_dssp EETT
T ss_pred EeCC
Confidence 7543
No 83
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=35.24 E-value=1.4e+02 Score=27.26 Aligned_cols=75 Identities=11% Similarity=0.030 Sum_probs=49.1
Q ss_pred EeeHHHHHHHHHHH--H-HHHHhCCCCCCCEEEEEc-CCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 010774 77 WLTYQEVYDAAIRF--G-SAMRSRGVNPGDRCGIYG-SNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 77 ~~Ty~el~~~v~~~--A-~~L~~~gv~~gd~V~i~~-~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
.+++.+........ | +.|...++++|++|+|+. ...+-.+++.+|- ..|+.++.+. +.++ ...++..++..
T Consensus 125 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~-~~Ga~vi~~~---~~~~-~~~~~~lGa~~ 199 (321)
T 3tqh_A 125 KLSFLQAASLPTAGLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAK-QKGTTVITTA---SKRN-HAFLKALGAEQ 199 (321)
T ss_dssp TSCHHHHHHSHHHHHHHHHHHHHTTCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEE---CHHH-HHHHHHHTCSE
T ss_pred CCCHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHH-HcCCEEEEEe---ccch-HHHHHHcCCCE
Confidence 36777765443321 2 335567899999999996 5666777666665 5688766554 3444 45677788887
Q ss_pred EEEc
Q 010774 153 AFVQ 156 (501)
Q Consensus 153 vl~~ 156 (501)
++-.
T Consensus 200 ~i~~ 203 (321)
T 3tqh_A 200 CINY 203 (321)
T ss_dssp EEET
T ss_pred EEeC
Confidence 6643
No 84
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=34.35 E-value=1.3e+02 Score=27.71 Aligned_cols=78 Identities=9% Similarity=-0.044 Sum_probs=51.5
Q ss_pred eeHHHHHHHHHH---HHHHHHhC--CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 010774 78 LTYQEVYDAAIR---FGSAMRSR--GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 78 ~Ty~el~~~v~~---~A~~L~~~--gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
+++.+....... ..+.|.+. ++++|++|+|.....+-.+++.+|-..-|..++.++. +.+.+ .+++..+++.
T Consensus 143 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~--~~~~~-~~~~~lGa~~ 219 (345)
T 3jv7_A 143 LDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDL--DDDRL-ALAREVGADA 219 (345)
T ss_dssp CCHHHHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCHHHhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcC--CHHHH-HHHHHcCCCE
Confidence 566665533322 22345554 7899999999998767888888877765777776654 33333 4567788888
Q ss_pred EEEcCC
Q 010774 153 AFVQEN 158 (501)
Q Consensus 153 vl~~~~ 158 (501)
++...+
T Consensus 220 ~i~~~~ 225 (345)
T 3jv7_A 220 AVKSGA 225 (345)
T ss_dssp EEECST
T ss_pred EEcCCC
Confidence 776544
No 85
>2egu_A Cysteine synthase; O-acetylserine sulfhydrase, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; 1.90A {Geobacillus kaustophilus}
Probab=34.18 E-value=2e+02 Score=25.99 Aligned_cols=63 Identities=10% Similarity=0.041 Sum_probs=42.5
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.| +++|+.|+. ...+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 57 ~~~g~~~~g~~vv~-assGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 120 (308)
T 2egu_A 57 EKAGKLKPGDTIVE-PTSGNTGIGLAMVAAAKGYKAVLVMPDTMSLERRNLLRAYGAELVLTPGA 120 (308)
T ss_dssp HHTTCCCTTCEEEE-ECCHHHHHHHHHHHHHHTCEEEEEEESCSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEE-eCCCHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 467776655 44444445566677789988776666555556667789999999998764
No 86
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=33.46 E-value=11 Score=38.14 Aligned_cols=30 Identities=27% Similarity=0.448 Sum_probs=25.3
Q ss_pred CCCCeEEEEecCCCC-CCCceEEeecHHHHH
Q 010774 218 KKTNISTIMYTSGTT-GEPKGVVLTNQAIVA 247 (501)
Q Consensus 218 ~~~~~~~i~~TSGtT-G~PK~v~~sh~~l~~ 247 (501)
.++.+.+..-||||| |.+|-+.+|...+-.
T Consensus 96 ~~~pi~~f~~SSGTT~gk~K~IP~T~~~l~~ 126 (581)
T 4epl_A 96 TGHPVPAISLSSGTSQGRPKFIPFTDELMEN 126 (581)
T ss_dssp SSSCCSEEEEEEEEETTEEEEEEECHHHHHH
T ss_pred CCCCcceEEecCCCCCCCccccccCHHHHHH
Confidence 456667899999999 779999999998765
No 87
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=33.45 E-value=3.5e+02 Score=26.38 Aligned_cols=124 Identities=8% Similarity=-0.110 Sum_probs=76.6
Q ss_pred CCCcceEEeeccCCCCCc--cEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEEEec
Q 010774 57 PNNQMLGGRKVSDGKVGP--YVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPLY 133 (501)
Q Consensus 57 p~~~al~~~~~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l~ 133 (501)
++.+|++..- .|.+|. ...+|.+.+...+..+.... ..++.+++++....+-+... +..++.++..|+.++.++
T Consensus 144 ~~d~a~i~~T--SGTTG~PKgV~~sh~~l~~~~~~~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~G~~~~~~~ 220 (521)
T 3l8c_A 144 GDDNYYIIFT--SGTTGQPKGVQISHDNLLSFTNWMIEDA-AFDVPKQPQMLAQPPYSFDLSVMYWAPTLALGGTLFALP 220 (521)
T ss_dssp TTSEEEEEEC--CC---CCCEEEEEHHHHHHHHHHHHHCT-TTCCCSSCEEECCSCTTSGGGHHHHHHHHHTTCEEEECC
T ss_pred CCCcEEEEEc--CCCCCCCCEEEEehHHHHHHHHHHhhcc-ccCCCCCCeEEecCCccHHHHHHHHHHHHhcCCEEEEcC
Confidence 4566666550 222221 24789998876554433221 24678888888887765433 456777888998888776
Q ss_pred CC--CCHHHHHHHHHhcCceEEEEcCCChhhhhhcC---ccCCCCccEEEEecCC
Q 010774 134 DT--LGANAVEFIINHAEVSIAFVQENKIPSILSCL---PRCCLYLKTIVSFANV 183 (501)
Q Consensus 134 ~~--~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~---~~~~~~~~~v~~~~~~ 183 (501)
.. ....++...+...++.+++........+.... ......++.++.-+..
T Consensus 221 ~~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~~~~~lr~~~~gG~~ 275 (521)
T 3l8c_A 221 KELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDFCQAKMPALTHFYFDGEE 275 (521)
T ss_dssp GGGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTCSTTTCTTCCEEEECSSC
T ss_pred HHHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhccccccCccceEEEEeccc
Confidence 54 37788889999999999888765544433221 2233456666655543
No 88
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=32.95 E-value=69 Score=28.78 Aligned_cols=24 Identities=13% Similarity=0.171 Sum_probs=20.1
Q ss_pred HHHHHHHhCCCCCCCEEEEEcCCc
Q 010774 89 RFGSAMRSRGVNPGDRCGIYGSNC 112 (501)
Q Consensus 89 ~~A~~L~~~gv~~gd~V~i~~~n~ 112 (501)
.+.+.|+++||++||.|.+...-+
T Consensus 17 ~L~~~L~~LGI~~Gd~llVHsSl~ 40 (273)
T 2nyg_A 17 SITEDLKALGLKKGMTVLVHSSLS 40 (273)
T ss_dssp HHHHHHHHHTCCTTCEEEEEECSG
T ss_pred HHHHHHHHcCCCCCCEEEEEechH
Confidence 367788999999999999988643
No 89
>4aec_A Cysteine synthase, mitochondrial; lyase, cysteine synthesis, assimilatory sulfate reduction, S plant inorganic sulfur uptake; HET: PLP; 2.40A {Arabidopsis thaliana}
Probab=32.90 E-value=2.2e+02 Score=27.48 Aligned_cols=63 Identities=8% Similarity=0.075 Sum_probs=47.1
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
.+.| +++|....+....+-.-..+.++|.+.|..++.+-|...+..-...++..++++++++.
T Consensus 166 ~~~G~l~~g~~~VV~aSsGNhG~AlA~aAa~~Gl~~~IvmP~~~s~~k~~~~r~~GAeVv~v~~ 229 (430)
T 4aec_A 166 EQKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLKAFGAELVLTDP 229 (430)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECG
T ss_pred HHcCCCCCCCcEEEEECCCHHHHHHHHHHHHhCCEEEEEEcCCCCHHHHHHHHHCCCEEEEECC
Confidence 4556 47776555555556666677778889999887776766667777888999999999974
No 90
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=32.71 E-value=1.9e+02 Score=27.12 Aligned_cols=61 Identities=10% Similarity=0.036 Sum_probs=40.4
Q ss_pred HHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC----CCHHHHHHHHHhc--CceEEEEcC
Q 010774 94 MRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHA--EVSIAFVQE 157 (501)
Q Consensus 94 L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~--~~~~vl~~~ 157 (501)
+...++++||.|.+..+....+.. ++...|+.++.++.. .+.+++...++.. ++++|++..
T Consensus 64 ~~~l~~~~gd~Vl~~~~~~~~~~~---~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~v~~~~ 130 (394)
T 1o69_A 64 LRVAGVKQDDIVLASSFTFIASVA---PICYLKAKPVFIDCDETYNIDVDLLKLAIKECEKKPKALILTH 130 (394)
T ss_dssp HHHTTCCTTCEEEEESSSCGGGTH---HHHHTTCEEEEECBCTTSSBCHHHHHHHHHHCSSCCCEEEEEC
T ss_pred HHHcCCCCCCEEEECCCccHHHHH---HHHHcCCEEEEEEeCCCCCcCHHHHHHHHhcccCCceEEEEEC
Confidence 334457889999888887766543 344578777666542 4677888877754 567776654
No 91
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=32.66 E-value=1.5e+02 Score=28.59 Aligned_cols=62 Identities=10% Similarity=-0.014 Sum_probs=30.1
Q ss_pred EEEcCCchhHHH-HHHHHHhcCCEEEEecCCCCHHH--HHHHHHhcCceEEEEcCCChhhhhhcC
Q 010774 106 GIYGSNCPEWII-AMEACNSQAITYVPLYDTLGANA--VEFIINHAEVSIAFVQENKIPSILSCL 167 (501)
Q Consensus 106 ~i~~~n~~~~~~-~~lA~~~~G~~~v~l~~~~~~~~--l~~~l~~~~~~~vl~~~~~~~~~~~~~ 167 (501)
+++..++.+.+. ++.++...|-.++..++.+.... +...++..++++++++....+.+.+.+
T Consensus 100 ~v~~~sG~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai 164 (430)
T 3ri6_A 100 VLALGSGMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHAC 164 (430)
T ss_dssp EEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHC
T ss_pred EEEECCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhh
Confidence 344445544433 33344455555555555543321 222556667777776655444444433
No 92
>3uhf_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich fold, isomerase; HET: DGL; 1.83A {Campylobacter jejuni} PDB: 3uho_A* 3uhp_A
Probab=32.38 E-value=93 Score=27.96 Aligned_cols=63 Identities=8% Similarity=-0.064 Sum_probs=49.3
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHH
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWI 116 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~ 116 (501)
..+++..+.-|+...+.+. |...-++-..+|.++.+++.+.+..|.+.|+ ...++.-|+...+
T Consensus 38 tv~~~i~~~lP~e~~iy~~---D~a~~PYG~ks~e~i~~~~~~~~~~L~~~g~----d~IVIACNTa~~~ 100 (274)
T 3uhf_A 38 SVLKSLYEARLFDEIIYYG---DTARVPYGVKDKDTIIKFCLEALDFFEQFQI----DMLIIACNTASAY 100 (274)
T ss_dssp HHHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCC----SEEEECCHHHHHH
T ss_pred HHHHHHHHHCCCCCEEEEe---cCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCChhHH
Confidence 4566667788999998888 7666666678999999999999999987765 4667777776644
No 93
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=32.29 E-value=1.4e+02 Score=29.73 Aligned_cols=107 Identities=10% Similarity=-0.067 Sum_probs=72.8
Q ss_pred EEeeHHHHHHHHHHHHHHHH-----hCCCCCCCEEEEEcCCchh-HHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 010774 76 VWLTYQEVYDAAIRFGSAMR-----SRGVNPGDRCGIYGSNCPE-WIIAMEACNSQAITYVPLYDTLGANAVEFIINHAE 149 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~-----~~gv~~gd~V~i~~~n~~~-~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 149 (501)
..+|.+.+...+..++..+. ...+..++++....+...+ .+..++..+..|+..+........+.+...++..+
T Consensus 193 V~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~i~~~~ 272 (562)
T 3ite_A 193 VRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHIGEMFLAWRFGLCAVTGERLSMLDDLPRTFRELG 272 (562)
T ss_dssp EEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHHHHHHHHHHTTCEEEECCHHHHHHSHHHHHHHTT
T ss_pred EEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhHHHHHHHHhcccEEEecchhhCHHHHHHHHHHcC
Confidence 36899999988888777654 2356778888877776543 34446778888988887665444567778899999
Q ss_pred ceEEEEcCCChhhhhhcCccCCCCccEEEEecCC
Q 010774 150 VSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (501)
Q Consensus 150 ~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (501)
+..++.....+.... ........++.++.-+..
T Consensus 273 ~t~~~~~P~~l~~~~-~~~~~~~~lr~~~~gG~~ 305 (562)
T 3ite_A 273 VTHAGIVPSLLDQTG-LVPEDAPHLVYLGVGGEK 305 (562)
T ss_dssp CCEEEECHHHHHHHT-CCGGGSTTCCEEEEESSC
T ss_pred CCEEEcCHHHHhhcc-cCccccCceEEEEEecCC
Confidence 999888765544332 222334566776665544
No 94
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=31.67 E-value=80 Score=29.24 Aligned_cols=61 Identities=11% Similarity=0.079 Sum_probs=39.8
Q ss_pred CCCCCCEEEEEcCCch------hHH-HHHHHHHhcCCEEEEecCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010774 98 GVNPGDRCGIYGSNCP------EWI-IAMEACNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~------~~~-~~~lA~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
-+++||+|+|++|.+. +-+ .+.--+-..|..++.-..- ..++++..++..-.+++|++...
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 4789999999999752 112 1222234567777654321 13446777888889999998864
No 95
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=31.57 E-value=1.5e+02 Score=27.46 Aligned_cols=79 Identities=9% Similarity=-0.013 Sum_probs=49.9
Q ss_pred EeeHHHHHHHH--HHHH-HHHHh-CCCCCCCEEEEEcC-CchhHHHHHHHHHhcCCEE-EEecCCCCHHHHHHHHHhcCc
Q 010774 77 WLTYQEVYDAA--IRFG-SAMRS-RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITY-VPLYDTLGANAVEFIINHAEV 150 (501)
Q Consensus 77 ~~Ty~el~~~v--~~~A-~~L~~-~gv~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~-v~l~~~~~~~~l~~~l~~~~~ 150 (501)
.+++.+..... -..| +.|.+ .++++|++|+|+.. ..+-.+++.+|-. .|+.. +..+.....++....++..++
T Consensus 139 ~l~~~~Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~-~Ga~vi~~~~~~~~~~~~~~~~~~lGa 217 (357)
T 1zsy_A 139 DIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAA-LGLRTINVVRDRPDIQKLSDRLKSLGA 217 (357)
T ss_dssp SSCHHHHHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHH-HTCEEEEEECCCSCHHHHHHHHHHTTC
T ss_pred CCCHHHHhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHH-cCCEEEEEecCccchHHHHHHHHhcCC
Confidence 36777755421 1222 23444 47999999999997 5677777776654 57744 444444444455566778898
Q ss_pred eEEEEc
Q 010774 151 SIAFVQ 156 (501)
Q Consensus 151 ~~vl~~ 156 (501)
+.++..
T Consensus 218 ~~vi~~ 223 (357)
T 1zsy_A 218 EHVITE 223 (357)
T ss_dssp SEEEEH
T ss_pred cEEEec
Confidence 887753
No 96
>1z7w_A Cysteine synthase; transferase; HET: PLP; 2.20A {Arabidopsis thaliana} SCOP: c.79.1.1 PDB: 1z7y_A* 2isq_A*
Probab=31.56 E-value=2.6e+02 Score=25.45 Aligned_cols=64 Identities=9% Similarity=0.106 Sum_probs=44.5
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.| +++|+...+....+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 58 ~~~G~~~~~~~~vv~assGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 122 (322)
T 1z7w_A 58 EKKGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILLAFGVELVLTDPA 122 (322)
T ss_dssp HHTTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCCEEEEeCCCHHHHHHHHHHHHcCCCEEEEeCCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 4555 466754444455555566667778899988877666555566677889999999998753
No 97
>1ve1_A O-acetylserine sulfhydrylase; PLP, transferase, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.45A {Thermus thermophilus} SCOP: c.79.1.1 PDB: 2eco_A* 2ecq_A* 2efy_A*
Probab=31.18 E-value=2.9e+02 Score=24.82 Aligned_cols=63 Identities=10% Similarity=0.072 Sum_probs=42.7
Q ss_pred HhCC-CCCCC--EEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRG-VNPGD--RCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~g-v~~gd--~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.| +++|+ .|+. ...+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 52 ~~~g~~~~g~~~~vv~-assGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~~~Ga~V~~~~~~ 117 (304)
T 1ve1_A 52 EERGILRPGSGQVIVE-PTSGNTGIGLAMIAASRGYRLILTMPAQMSEERKRVLKAFGAELVLTDPE 117 (304)
T ss_dssp HHTTSCCTTSCCEEEE-SCCSHHHHHHHHHHHHHTCEEEEEEETTCCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCccEEEE-eCCcHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 56677 4444 34444445556667799988777666555566667889999999999865
No 98
>3out_A Glutamate racemase; structural genomics, center for structural genomics of infec diseases, csgid, MURI, cell envelope; HET: MSE DGL; 1.65A {Francisella tularensis subsp}
Probab=30.34 E-value=1.8e+02 Score=25.89 Aligned_cols=62 Identities=15% Similarity=0.053 Sum_probs=48.0
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW 115 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~ 115 (501)
..+++..+.-|+...+.+. |...-++-..+|.++.+++.+.+..|.+.|+ ...++.-|+...
T Consensus 21 tv~~~i~~~lp~~~~iy~~---D~a~~PYG~~~~~~i~~~~~~~~~~L~~~g~----~~iVIACNTa~~ 82 (268)
T 3out_A 21 TIVKNLMSILPNEDIIYFG---DIARIPYGTKSRATIQKFAAQTAKFLIDQEV----KAIIIACNTISA 82 (268)
T ss_dssp HHHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHHTTC----SEEEECCHHHHH
T ss_pred HHHHHHHHHCCCCcEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCChHH
Confidence 4466666788988888877 6665666678999999999999999998865 466666676654
No 99
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=30.25 E-value=1.1e+02 Score=28.35 Aligned_cols=75 Identities=7% Similarity=-0.121 Sum_probs=47.7
Q ss_pred EeeHHHHHHHHHH---HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceE
Q 010774 77 WLTYQEVYDAAIR---FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 77 ~~Ty~el~~~v~~---~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
.+++.+....... ..+.+...++++|++|+|+....+-.+++.+|- ..|+ .++.++.. .+. ..+++..+++.
T Consensus 139 ~~~~~~aa~~~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~~Vi~~~~~--~~~-~~~~~~lGa~~ 214 (352)
T 3fpc_A 139 EIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGAN-HLGAGRIFAVGSR--KHC-CDIALEYGATD 214 (352)
T ss_dssp TSCHHHHTTTTTHHHHHHHHHHHTTCCTTCCEEEECCSHHHHHHHHHHH-TTTCSSEEEECCC--HHH-HHHHHHHTCCE
T ss_pred CCCHHHHhhccchhHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCcEEEEECCC--HHH-HHHHHHhCCce
Confidence 3677766533221 223456678999999999987666776666664 5787 56666542 333 34567778877
Q ss_pred EEE
Q 010774 153 AFV 155 (501)
Q Consensus 153 vl~ 155 (501)
++.
T Consensus 215 vi~ 217 (352)
T 3fpc_A 215 IIN 217 (352)
T ss_dssp EEC
T ss_pred EEc
Confidence 764
No 100
>2v03_A Cysteine synthase B; pyridoxal phosphate, cysteine biosynthesis, transferase, ENZ kinetics, enzymatic sythesis of novel compounds; HET: LLP CIT; 1.33A {Escherichia coli} PDB: 2bhs_A* 2bht_A* 2jc3_A*
Probab=30.05 E-value=3.1e+02 Score=24.70 Aligned_cols=63 Identities=14% Similarity=0.065 Sum_probs=43.9
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.| +++|+.|+.... +-.-..+.++|.+.|..++.+-|...+..-...++..++++++++..
T Consensus 53 ~~~g~~~~g~~vv~~ss-GN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~Ga~v~~~~~~ 116 (303)
T 2v03_A 53 EKRGEIKPGDVLIEATS-GNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMRAYGAELILVTKE 116 (303)
T ss_dssp HHTTCCCTTCEEEEECS-SHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECTT
T ss_pred HHcCCCCCCCEEEEECC-cHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEECCC
Confidence 3445 467777666654 44444556667799988877766655566667889999999999863
No 101
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=29.57 E-value=91 Score=28.99 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=39.6
Q ss_pred CCCCCCEEEEEcCCchh------HHHHHH-HHHhcCCEEEEecC------------CCCHHHHHHHHHhcCceEEEEcCC
Q 010774 98 GVNPGDRCGIYGSNCPE------WIIAME-ACNSQAITYVPLYD------------TLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~------~~~~~l-A~~~~G~~~v~l~~------------~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
-+++||+|+|+.|.+.- -+-... -+-..|..++.-.. ....+++..++..-++++|++...
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 47999999999998732 222222 23346877765321 113446677777788999998864
No 102
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=29.55 E-value=1.4e+02 Score=27.66 Aligned_cols=77 Identities=13% Similarity=0.049 Sum_probs=47.6
Q ss_pred EeeHHHHHHHHHH---HHHHHHhCCCC-CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceE
Q 010774 77 WLTYQEVYDAAIR---FGSAMRSRGVN-PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 77 ~~Ty~el~~~v~~---~A~~L~~~gv~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
.+++.+....... .-+.|.+.+++ +|++|+|+....+-.+++.+|-. .|+.++.+... .+.+..+.+..+++.
T Consensus 152 ~ls~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qlak~-~Ga~Vi~~~~~--~~~~~~~~~~lGa~~ 228 (357)
T 2cf5_A 152 GMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGGILGLGGVGHMGVKIAKA-MGHHVTVISSS--NKKREEALQDLGADD 228 (357)
T ss_dssp SCCHHHHTGGGTHHHHHHHHHHHTSTTSTTCEEEEECCSHHHHHHHHHHHH-HTCEEEEEESS--TTHHHHHHTTSCCSC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeCC--hHHHHHHHHHcCCce
Confidence 3677765422111 12345667888 99999999876677777776654 57766665543 334444444777776
Q ss_pred EEEc
Q 010774 153 AFVQ 156 (501)
Q Consensus 153 vl~~ 156 (501)
++..
T Consensus 229 vi~~ 232 (357)
T 2cf5_A 229 YVIG 232 (357)
T ss_dssp EEET
T ss_pred eecc
Confidence 6543
No 103
>2gzm_A Glutamate racemase; enzyme, isomerase; HET: DGL; 1.99A {Bacillus anthracis}
Probab=29.47 E-value=2e+02 Score=25.52 Aligned_cols=78 Identities=13% Similarity=0.120 Sum_probs=52.3
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcC
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQA 126 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G 126 (501)
.++++..+..|+...+.+. |...-++-..++.++.+++.+.+..|.+.|+ ...++.-|+...+..--.-...+
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~iviaCNTas~~~l~~lr~~~~ 89 (267)
T 2gzm_A 17 TVAKELIRQLPKERIIYLG---DTARCPYGPRSREEVRQFTWEMTEHLLDLNI----KMLVIACNTATAVVLEEMQKQLP 89 (267)
T ss_dssp HHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC----SEEEECCHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHCCCCCEEEec---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCchhhHHHHHHHHHhCC
Confidence 5667777789998888777 6654555567899999999999999988765 45666666665322222223345
Q ss_pred CEEEE
Q 010774 127 ITYVP 131 (501)
Q Consensus 127 ~~~v~ 131 (501)
..++-
T Consensus 90 iPvig 94 (267)
T 2gzm_A 90 IPVVG 94 (267)
T ss_dssp SCEEE
T ss_pred CCEEe
Confidence 55554
No 104
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=29.32 E-value=62 Score=36.54 Aligned_cols=122 Identities=11% Similarity=-0.002 Sum_probs=81.9
Q ss_pred CCCCcceEEeeccCCCCCcc--EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhH-HHHHHHHHhcCCEEEEe
Q 010774 56 IPNNQMLGGRKVSDGKVGPY--VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEW-IIAMEACNSQAITYVPL 132 (501)
Q Consensus 56 ~p~~~al~~~~~~~~~~~~~--~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~-~~~~lA~~~~G~~~v~l 132 (501)
.|+.+|++..- .|.+|.. ..+|.+.+... .......++.++|++..+.+-+.+. +.-+++.+..|+.++..
T Consensus 605 ~~~~~ayiiyT--SGSTG~PKgV~~~h~~l~~~----~~~~~~~~~~~~d~~l~~~~~~fd~~~~~~~~~l~~G~~l~~~ 678 (1304)
T 2vsq_A 605 DPNDPAYIMYT--SGTTGKPKGNITTHANIQGL----VKHVDYMAFSDQDTFLSVSNYAFDAFTFDFYASMLNAARLIIA 678 (1304)
T ss_dssp CTTSEEEEEEE--CCSSSSCEEEEEEHHHHHHH----HSSCCSSCCCTTCEEEECSCTTSTHHHHHHHHHHTTTCEEEEC
T ss_pred CCCCeEEEEeC--CCCCCCCCEEEEehHHHHHH----HHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHHcCCEEEEC
Confidence 46777776551 2332321 46888887643 1222335788999999888876544 34578888899988887
Q ss_pred cC--CCCHHHHHHHHHhcCceEEEEcCCChhhhhhcCccCCCCccEEEEecCC
Q 010774 133 YD--TLGANAVEFIINHAEVSIAFVQENKIPSILSCLPRCCLYLKTIVSFANV 183 (501)
Q Consensus 133 ~~--~~~~~~l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 183 (501)
++ ..+++.+...++..++.+++.....+..+.+........++.++.-+..
T Consensus 679 ~~~~~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~lr~~~~gGe~ 731 (1304)
T 2vsq_A 679 DEHTLLDTERLTDLILQENVNVMFATTALFNLLTDAGEDWMKGLRCILFGGER 731 (1304)
T ss_dssp CGGGTTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCSHHHHTCSEEEEESSC
T ss_pred ChhhcCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhchhcCCCccEEEEecCC
Confidence 76 3678899999999999999988776665544333334566777766654
No 105
>3dwg_A Cysteine synthase B; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} SCOP: c.79.1.0 PDB: 3fgp_A* 3dki_A* 3dwi_A*
Probab=28.74 E-value=3.1e+02 Score=25.06 Aligned_cols=63 Identities=11% Similarity=0.049 Sum_probs=45.1
Q ss_pred HhCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.| +++|+.|+... .+-.-..+.++|.+.|..++.+-|...+......++..++++++++..
T Consensus 65 ~~~g~l~~~~~vv~aS-sGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 128 (325)
T 3dwg_A 65 EADGLLRPGATILEPT-SGNTGISLAMAARLKGYRLICVMPENTSVERRQLLELYGAQIIFSAAE 128 (325)
T ss_dssp HHTTCCCTTCEEEEEC-SSHHHHHHHHHHHHHTCEEEEEEESSSCHHHHHHHHHHTCEEEEECST
T ss_pred HHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 3445 56777766654 344556666677888988877766666666778889999999999864
No 106
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=28.46 E-value=2.7e+02 Score=25.43 Aligned_cols=56 Identities=11% Similarity=0.078 Sum_probs=36.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEec--CC----CCHHHHHHHHHh----cCceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLY--DT----LGANAVEFIINH----AEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~--~~----~~~~~l~~~l~~----~~~~~vl~~~ 157 (501)
+++||.|.+..+....+... +...|+.++.++ .. .+.+++...++. .+++++++..
T Consensus 90 ~~~gd~vl~~~~~~~~~~~~---~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~~ 155 (371)
T 2e7j_A 90 AKKDAWVVMDENCHYSSYVA---AERAGLNIALVPKTDYPDYAITPENFAQTIEETKKRGEVVLALITY 155 (371)
T ss_dssp CCTTCEEEEETTCCHHHHHH---HHHTTCEEEEECCCCTTTCCCCHHHHHHHHHHHTTTSCEEEEEEES
T ss_pred hCCCCEEEEccCcchHHHHH---HHHcCCeEEEeecccCCCCCcCHHHHHHHHHhhcccCCeEEEEEEC
Confidence 46788888877766554433 567787776665 22 367778777764 3566666654
No 107
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=28.17 E-value=1.6e+02 Score=27.63 Aligned_cols=74 Identities=14% Similarity=0.053 Sum_probs=45.8
Q ss_pred eeHHHHHHHHHH---HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 78 LTYQEVYDAAIR---FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 78 ~Ty~el~~~v~~---~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
+++.+....... ..+.|.+.++++|++|+|.....+-.+++.+|- ..|+.++.+... ++.+. .++..++..++
T Consensus 168 ls~~~aa~l~~~~~tA~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~Vi~~~~~--~~~~~-~a~~lGa~~vi 243 (369)
T 1uuf_A 168 EQLAAVAPLLCAGITTYSPLRHWQAGPGKKVGVVGIGGLGHMGIKLAH-AMGAHVVAFTTS--EAKRE-AAKALGADEVV 243 (369)
T ss_dssp GGHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEESS--GGGHH-HHHHHTCSEEE
T ss_pred CCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeCC--HHHHH-HHHHcCCcEEe
Confidence 677764322211 124456668999999999988666777777665 468776655542 33333 34457777666
Q ss_pred E
Q 010774 155 V 155 (501)
Q Consensus 155 ~ 155 (501)
-
T Consensus 244 ~ 244 (369)
T 1uuf_A 244 N 244 (369)
T ss_dssp E
T ss_pred c
Confidence 4
No 108
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=27.63 E-value=1.9e+02 Score=26.52 Aligned_cols=56 Identities=4% Similarity=-0.049 Sum_probs=27.5
Q ss_pred CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC----CCHHHHHHHHHhcCceEEEEc
Q 010774 100 NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 100 ~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
++||.|.+..+....+.....++...|+.++.++.. .+.+++...++. ++++|++.
T Consensus 87 ~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 146 (384)
T 1eg5_A 87 KRKRTIITTPIEHKAVLETMKYLSMKGFKVKYVPVDSRGVVKLEELEKLVDE-DTFLVSIM 146 (384)
T ss_dssp TTCCEEEECTTSCHHHHHHHHHHHHTTCEEEECCBCTTSCBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCEEEECCCCchHHHHHHHHHHhcCCEEEEEccCCCCccCHHHHHHHhCC-CCeEEEEE
Confidence 456666665555444443333444556655544321 344555554432 45555544
No 109
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=27.52 E-value=3.2e+02 Score=24.86 Aligned_cols=64 Identities=9% Similarity=-0.039 Sum_probs=41.6
Q ss_pred HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 92 SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 92 ~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+.+...++++|++|+|...-..-.+++.+|-..-...++.++. +++. ..+++..++..++...+
T Consensus 151 ~~~~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~--~~~k-~~~a~~lGa~~~i~~~~ 214 (346)
T 4a2c_A 151 HAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI--SSEK-LALAKSFGAMQTFNSSE 214 (346)
T ss_dssp HHHHHTTCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEES--CHHH-HHHHHHTTCSEEEETTT
T ss_pred HHHHHhccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEec--hHHH-HHHHHHcCCeEEEeCCC
Confidence 3455668999999999988667766666665443344455543 2333 35567888888776543
No 110
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=27.44 E-value=1.8e+02 Score=26.95 Aligned_cols=56 Identities=9% Similarity=0.029 Sum_probs=30.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-------CCHHHHHHHHHhcCceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-------LGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-------~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
+++||.|.+..+.... ...++...|+.++.++.. .+.+++...++..++++|++..
T Consensus 106 ~~~gd~vl~~~~~~~~---~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~ 168 (391)
T 3dzz_A 106 TSPGDQILVQEPVYNM---FYSVIEGNGRRVISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCN 168 (391)
T ss_dssp SCTTCEEEECSSCCHH---HHHHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEES
T ss_pred CCCCCeEEECCCCcHH---HHHHHHHcCCEEEEeeeeecCCceeecHHHHHHHHhccCceEEEEEC
Confidence 3566766655554433 233445566666555432 4566676666555666665443
No 111
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=27.25 E-value=1.4e+02 Score=27.06 Aligned_cols=73 Identities=7% Similarity=-0.008 Sum_probs=48.3
Q ss_pred EeeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIRFG---SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+.......++ +.|...++++|++|+|+....+-.+++.+|- ..|+.++.+. + .+.+ ..++..+++.+
T Consensus 115 ~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qlak-~~Ga~Vi~~~-~--~~~~-~~~~~lGa~~v 189 (315)
T 3goh_A 115 NLSFERAAALPCPLLTAWQAFEKIPLTKQREVLIVGFGAVNNLLTQMLN-NAGYVVDLVS-A--SLSQ-ALAAKRGVRHL 189 (315)
T ss_dssp TSCHHHHHTSHHHHHHHHHHHTTSCCCSCCEEEEECCSHHHHHHHHHHH-HHTCEEEEEC-S--SCCH-HHHHHHTEEEE
T ss_pred CCCHHHHhhCccHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEE-C--hhhH-HHHHHcCCCEE
Confidence 468888753333333 2344458999999999999556777666665 5688777776 2 3333 33567888888
Q ss_pred E
Q 010774 154 F 154 (501)
Q Consensus 154 l 154 (501)
+
T Consensus 190 ~ 190 (315)
T 3goh_A 190 Y 190 (315)
T ss_dssp E
T ss_pred E
Confidence 8
No 112
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=27.19 E-value=2.4e+02 Score=26.23 Aligned_cols=61 Identities=16% Similarity=0.167 Sum_probs=41.8
Q ss_pred HHHHhCCCC-CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 92 SAMRSRGVN-PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 92 ~~L~~~gv~-~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
+.|.+.+++ +|++|+|.....+-..++.+|- ..|+.++.+.. +.+.+....+..+++.++-
T Consensus 177 ~al~~~~~~~~g~~VlV~GaG~vG~~~~q~a~-~~Ga~Vi~~~~--~~~~~~~~~~~lGa~~v~~ 238 (366)
T 1yqd_A 177 SPLKYFGLDEPGKHIGIVGLGGLGHVAVKFAK-AFGSKVTVIST--SPSKKEEALKNFGADSFLV 238 (366)
T ss_dssp HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CGGGHHHHHHTSCCSEEEE
T ss_pred HHHHhcCcCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHhcCCceEEe
Confidence 345667888 9999999987667777776665 56877666554 3455555555778776654
No 113
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=27.02 E-value=2.1e+02 Score=26.65 Aligned_cols=59 Identities=12% Similarity=0.115 Sum_probs=39.7
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
.|...++++|++|+|.....+-.+++.+|- ..|+ .++.++.. ++. ..+++..++..++-
T Consensus 174 ~l~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~-~~~a~~lGa~~vi~ 233 (370)
T 4ej6_A 174 GVDLSGIKAGSTVAILGGGVIGLLTVQLAR-LAGATTVILSTRQ--ATK-RRLAEEVGATATVD 233 (370)
T ss_dssp HHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--HHH-HHHHHHHTCSEEEC
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHH-HHHHHHcCCCEEEC
Confidence 355568999999999988556666666655 5787 66666542 333 34566778876663
No 114
>1zuw_A Glutamate racemase 1; (R)-glutamate, peptidoglycan biosynthesi isomerase; HET: DGL; 1.75A {Bacillus subtilis}
Probab=26.61 E-value=2.4e+02 Score=25.03 Aligned_cols=62 Identities=13% Similarity=0.131 Sum_probs=47.3
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHh-CCCCCCCEEEEEcCCchhH
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRS-RGVNPGDRCGIYGSNCPEW 115 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~-~gv~~gd~V~i~~~n~~~~ 115 (501)
.++++..+..|+...+.+. |....++-..+..++.+++.+.+..|.+ .|+ ...++.-|+...
T Consensus 17 tv~~~i~~~lP~~~~iy~~---D~~~~PyG~~s~~~i~~~~~~~~~~L~~~~g~----d~iViACNTas~ 79 (272)
T 1zuw_A 17 TVAKEIMRQLPKENIIYVG---DTKRCPYGPRPEEEVLQYTWELTNYLLENHHI----KMLVIACNTATA 79 (272)
T ss_dssp HHHHHHHHHSTTCCEEEEE---CGGGCCCSSSCHHHHHHHHHHHHHHHHHHSCC----SEEEECCHHHHH
T ss_pred HHHHHHHHhCCCCcEEEec---cCCCCCCCCCCHHHHHHHHHHHHHHHHhhcCC----CEEEEeCchhhH
Confidence 5677777889999888776 6554455567999999999999999998 776 356666666654
No 115
>2pqm_A Cysteine synthase; OASS, PLP, lyase; HET: PLP; 1.86A {Entamoeba histolytica} PDB: 3bm5_A*
Probab=26.46 E-value=3.6e+02 Score=24.79 Aligned_cols=59 Identities=10% Similarity=-0.024 Sum_probs=40.9
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
+++|+.|+.... +-.-..+.++|...|..++.+-|...+..-...++..++.+++++..
T Consensus 75 ~~~g~~vv~aSs-GN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~~~~~ 133 (343)
T 2pqm_A 75 LKPGMEIIESTS-GNTGIALCQAGAVFGYRVNIAMPSTMSVERQMIMKAFGAELILTEGK 133 (343)
T ss_dssp SCTTCEEEEECS-SHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred CCCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCC
Confidence 467776666654 43444555666778987776666555566667889999999998763
No 116
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=26.21 E-value=3.6e+02 Score=24.96 Aligned_cols=55 Identities=4% Similarity=-0.016 Sum_probs=34.0
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhc---CceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHA---EVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~---~~~~vl~~~ 157 (501)
.++||.|.+..+....+. .++...|+.+++++. .+.+++...++.. ++++|++..
T Consensus 124 ~~~gd~V~~~~p~~~~~~---~~~~~~g~~~~~v~~-~d~~~l~~~l~~~~~~~~~~v~~~~ 181 (398)
T 3a2b_A 124 MGRNDYILLDERDHASII---DGSRLSFSKVIKYGH-NNMEDLRAKLSRLPEDSAKLICTDG 181 (398)
T ss_dssp SCTTCEEEEETTCCHHHH---HHHHHSSSEEEEECT-TCHHHHHHHHHTSCSSSCEEEEEES
T ss_pred hCCCCEEEECCccCHHHH---HHHHHcCCceEEeCC-CCHHHHHHHHHhhccCCceEEEEeC
Confidence 467777777766554443 345566777766654 4567777777654 566666544
No 117
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=26.00 E-value=1.7e+02 Score=27.51 Aligned_cols=61 Identities=15% Similarity=0.216 Sum_probs=39.8
Q ss_pred CCCCCCEEEEEcCCchh------HHHH-HHHHHhcCCEEEEecCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010774 98 GVNPGDRCGIYGSNCPE------WIIA-MEACNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~------~~~~-~lA~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
-+++||+|+|++|.+.- -+-. .--+-..|..++.-... ...+++..++..-++++|++...
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 58999999999998742 2222 22233578777654321 13446667777788999998864
No 118
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=25.62 E-value=1.8e+02 Score=26.84 Aligned_cols=61 Identities=7% Similarity=0.009 Sum_probs=39.7
Q ss_pred CCCCCCEEEEEcCCchh------HHHHHH-HHHhcCCEEEEecCC------------CCHHHHHHHHHhcCceEEEEcCC
Q 010774 98 GVNPGDRCGIYGSNCPE------WIIAME-ACNSQAITYVPLYDT------------LGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~------~~~~~l-A~~~~G~~~v~l~~~------------~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
-+++||+|+|+.|.+.- -+-... -+-..|..++.-... ...+++..++..-++++|++...
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 47899999999998642 222222 233478777654321 13446777777788999998764
No 119
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=25.25 E-value=2.5e+02 Score=26.14 Aligned_cols=58 Identities=12% Similarity=0.024 Sum_probs=33.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC----CCHHHHHHHHHhcCceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT----LGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~----~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
+++||.|.+..+...... ..-++...|+.++.++.. .+.+++...++..++++|+...
T Consensus 83 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~ 144 (416)
T 3isl_A 83 IEPEDDVLIPIYGRFGYL-LTEIAERYGANVHMLECEWGTVFDPEDIIREIKKVKPKIVAMVH 144 (416)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTCCCCHHHHHHHHHHHCCSEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHhcCCeeEEEecCCCCCCCHHHHHHHHhhCCCcEEEEEc
Confidence 567888777766543311 223455566665544332 3667777777655666666654
No 120
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=25.15 E-value=1.4e+02 Score=20.70 Aligned_cols=46 Identities=15% Similarity=0.127 Sum_probs=33.9
Q ss_pred EEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCE
Q 010774 76 VWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAIT 128 (501)
Q Consensus 76 ~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~ 128 (501)
..+.+.++.+. +.++++.+++.|.+++........+...+...|..
T Consensus 22 ~~ip~~~l~~~-------~~~l~~~~~~~ivv~C~~g~rs~~aa~~L~~~G~~ 67 (85)
T 2jtq_A 22 INIPLKEVKER-------IATAVPDKNDTVKVYCNAGRQSGQAKEILSEMGYT 67 (85)
T ss_dssp EECCHHHHHHH-------HHHHCCCTTSEEEEEESSSHHHHHHHHHHHHTTCS
T ss_pred EEcCHHHHHHH-------HHHhCCCCCCcEEEEcCCCchHHHHHHHHHHcCCC
Confidence 56778777543 44456778899999999888777777777777753
No 121
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=25.08 E-value=1.7e+02 Score=27.19 Aligned_cols=74 Identities=15% Similarity=0.081 Sum_probs=46.5
Q ss_pred EeeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceE
Q 010774 77 WLTYQEVYDAAIRFG---SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSI 152 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~ 152 (501)
.+++.+..- ...++ +.|...++++|++|+|+....+-.+++.+|- ..|+ .++.++. +.+.+ .+++..++..
T Consensus 145 ~l~~~~aa~-~~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~~ 219 (356)
T 1pl8_A 145 NVTFEEGAL-IEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAK-AMGAAQVVVTDL--SATRL-SKAKEIGADL 219 (356)
T ss_dssp TSCHHHHHH-HHHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHHH-HHHHHTTCSE
T ss_pred CCCHHHHHh-hchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECC--CHHHH-HHHHHhCCCE
Confidence 367777542 22222 2344558999999999987666777777665 4687 6666654 23333 3456778876
Q ss_pred EEE
Q 010774 153 AFV 155 (501)
Q Consensus 153 vl~ 155 (501)
++.
T Consensus 220 vi~ 222 (356)
T 1pl8_A 220 VLQ 222 (356)
T ss_dssp EEE
T ss_pred EEc
Confidence 664
No 122
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=25.04 E-value=1.8e+02 Score=27.06 Aligned_cols=55 Identities=11% Similarity=0.015 Sum_probs=27.8
Q ss_pred CCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEE
Q 010774 97 RGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 97 ~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~ 155 (501)
.++++||.|.+..+....+. -++...|+.++.++.. .+.+++...++. ++++|++
T Consensus 74 ~~~~~gd~Vl~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~d~~~l~~~l~~-~~~~v~~ 133 (393)
T 1mdo_A 74 LGIGEGDEVITPSMTWVSTL---NMIVLLGANPVMVDVDRDTLMVTPEHIEAAITP-QTKAIIP 133 (393)
T ss_dssp TTCCTTCEEEEESSSCHHHH---HHHHHTTCEEEEECBCTTTCCBCHHHHHHHCCT-TEEEECC
T ss_pred cCCCCCCEEEeCCCccHhHH---HHHHHCCCEEEEEeccCCcCCCCHHHHHHhcCC-CceEEEE
Confidence 34566777666655544432 3344556655444321 345555555532 4555554
No 123
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=24.65 E-value=2.5e+02 Score=27.14 Aligned_cols=77 Identities=14% Similarity=0.149 Sum_probs=48.2
Q ss_pred EeeHHHHHHHHHH--HHH-HHHh---CCCCCCCEEEEEcC-CchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcC
Q 010774 77 WLTYQEVYDAAIR--FGS-AMRS---RGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAE 149 (501)
Q Consensus 77 ~~Ty~el~~~v~~--~A~-~L~~---~gv~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~ 149 (501)
.+++.+....... .|. .|.. .++++|++|+|+.. -.+-.+++.+|- ..|+.++.+.. +.+.+. .++..+
T Consensus 198 ~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak-~~Ga~vi~~~~--~~~~~~-~~~~lG 273 (456)
T 3krt_A 198 HLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFAL-AGGANPICVVS--SPQKAE-ICRAMG 273 (456)
T ss_dssp TSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHH-HHHHHT
T ss_pred CCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHH-HcCCeEEEEEC--CHHHHH-HHHhhC
Confidence 3678776532222 222 2332 47999999999998 556666665554 56887766653 455544 457788
Q ss_pred ceEEEEcC
Q 010774 150 VSIAFVQE 157 (501)
Q Consensus 150 ~~~vl~~~ 157 (501)
+..++...
T Consensus 274 a~~vi~~~ 281 (456)
T 3krt_A 274 AEAIIDRN 281 (456)
T ss_dssp CCEEEETT
T ss_pred CcEEEecC
Confidence 88776543
No 124
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=24.47 E-value=2e+02 Score=26.65 Aligned_cols=79 Identities=9% Similarity=-0.010 Sum_probs=48.8
Q ss_pred EeeHHHHHHHH--HHHH-HHHHhC-CCCCC-CEEEEEcC-CchhHHHHHHHHHhcCCEEEEecCC-CCHHHHHHHHHhcC
Q 010774 77 WLTYQEVYDAA--IRFG-SAMRSR-GVNPG-DRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDT-LGANAVEFIINHAE 149 (501)
Q Consensus 77 ~~Ty~el~~~v--~~~A-~~L~~~-gv~~g-d~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~-~~~~~l~~~l~~~~ 149 (501)
.+++.+..... -..| +.|.+. ++++| ++|+|... ..+-.+++.+|- ..|+.++.+... ...++....++..+
T Consensus 138 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak-~~Ga~vi~~~~~~~~~~~~~~~~~~lG 216 (364)
T 1gu7_A 138 GLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGK-LLNFNSISVIRDRPNLDEVVASLKELG 216 (364)
T ss_dssp CCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHH-HHTCEEEEEECCCTTHHHHHHHHHHHT
T ss_pred CCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHH-HCCCEEEEEecCccccHHHHHHHHhcC
Confidence 37887754332 1222 335553 79999 99999987 667777777766 468766555432 22233445557788
Q ss_pred ceEEEEc
Q 010774 150 VSIAFVQ 156 (501)
Q Consensus 150 ~~~vl~~ 156 (501)
++.++-.
T Consensus 217 a~~vi~~ 223 (364)
T 1gu7_A 217 ATQVITE 223 (364)
T ss_dssp CSEEEEH
T ss_pred CeEEEec
Confidence 8877753
No 125
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=23.75 E-value=2.8e+02 Score=26.32 Aligned_cols=14 Identities=14% Similarity=0.316 Sum_probs=8.6
Q ss_pred CCceEEeecHHHHH
Q 010774 234 EPKGVVLTNQAIVA 247 (501)
Q Consensus 234 ~PK~v~~sh~~l~~ 247 (501)
.+-|+++....++.
T Consensus 235 ~~~G~vv~~~~~~~ 248 (414)
T 3ndn_A 235 VLGGAILGDREYID 248 (414)
T ss_dssp CCCEEEEECHHHHT
T ss_pred ceEEEEEECHHHHH
Confidence 34577777766554
No 126
>2jfq_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: DGL; 2.15A {Staphylococcus aureus}
Probab=23.74 E-value=2.9e+02 Score=24.75 Aligned_cols=83 Identities=11% Similarity=0.082 Sum_probs=53.4
Q ss_pred CCCCHHHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHH
Q 010774 41 GLESPWQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAME 120 (501)
Q Consensus 41 ~~~tl~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~l 120 (501)
...++ .++++..+..|+...+.+. |...-++-..++.++.+++.+.+..|.+.|+ ...++.-|+...+..--
T Consensus 31 G~Ggl-tv~~~i~~~~P~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~IVIaCNTas~~~l~~ 102 (286)
T 2jfq_A 31 GVGGL-TVAKEIMRQLPNETIYYLG---DIGRCPYGPRPGEQVKQYTVEIARKLMEFDI----KMLVIACNTATAVALEY 102 (286)
T ss_dssp SSTTH-HHHHHHHHHCTTCCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHTTSCC----SEEEECCHHHHHHHHHH
T ss_pred CCCcH-HHHHHHHHHCCCccEEEec---cCCCCCcCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCCchhHHHHHH
Confidence 33344 5677777789988888766 5544444467899999999999999987665 45666666665322111
Q ss_pred HHHhcCCEEEE
Q 010774 121 ACNSQAITYVP 131 (501)
Q Consensus 121 A~~~~G~~~v~ 131 (501)
.-...+..++-
T Consensus 103 lr~~~~iPVig 113 (286)
T 2jfq_A 103 LQKTLSISVIG 113 (286)
T ss_dssp HHHHCSSEEEE
T ss_pred HHHhCCCCEEe
Confidence 12234555554
No 127
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=23.68 E-value=2.9e+02 Score=25.53 Aligned_cols=57 Identities=14% Similarity=0.078 Sum_probs=32.7
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecC----CCCHHHHHHHHHhcCceEEEEc
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYD----TLGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~----~~~~~~l~~~l~~~~~~~vl~~ 156 (501)
+++||.|++..+....+. ..-++...|+.++.++. ..+.+++...++..++++|++.
T Consensus 90 ~~~gd~vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~v~~~ 150 (396)
T 2ch1_A 90 LEEGDRVLIAVNGIWAER-AVEMSERYGADVRTIEGPPDRPFSLETLARAIELHQPKCLFLT 150 (396)
T ss_dssp CCTTCEEEEEESSHHHHH-HHHHHHHTTCEEEEEECCTTSCCCHHHHHHHHHHHCCSEEEEE
T ss_pred cCCCCeEEEEcCCcccHH-HHHHHHHcCCceEEecCCCCCCCCHHHHHHHHHhCCCCEEEEE
Confidence 457787777776655432 12244556666554432 2466777777765456666654
No 128
>2jfz_A Glutamate racemase; cell WALL, isomerase, cell shape, peptidoglycan synthesis, peptidoglycan biosynthesis; HET: 003 DGL; 1.86A {Helicobacter pylori} PDB: 2jfx_A* 2jfy_A* 2w4i_A*
Probab=23.62 E-value=98 Score=27.33 Aligned_cols=61 Identities=10% Similarity=-0.005 Sum_probs=45.7
Q ss_pred HHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchh
Q 010774 47 QFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPE 114 (501)
Q Consensus 47 ~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~ 114 (501)
..+++..+..|+...+.+. |....++...++.++.+++.+.+..|.+.|+ ...++.-|+..
T Consensus 14 tv~~~l~~~lP~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~iviaCNTa~ 74 (255)
T 2jfz_A 14 SVLKSLLKARLFDEIIYYG---DSARVPYGTKDPTTIKQFGLEALDFFKPHEI----ELLIVACNTAS 74 (255)
T ss_dssp HHHHHHHHTTCCSEEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHGGGCC----SCEEECCHHHH
T ss_pred HHHHHHHHHCCCCCEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCchhh
Confidence 4566666789999888877 6655555567999999999999999988765 34555556554
No 129
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=23.55 E-value=2.8e+02 Score=25.70 Aligned_cols=55 Identities=4% Similarity=-0.014 Sum_probs=35.1
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCC-----CCHHHHHHHHHhcCceEEEEc
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDT-----LGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~-----~~~~~l~~~l~~~~~~~vl~~ 156 (501)
++++||.|.+..+....... ++...|+.++.++.. .+.+++...++. ++++|++.
T Consensus 76 ~~~~g~~Vi~~~~~~~~~~~---~~~~~g~~~~~~~~~~~~~~~d~~~l~~~i~~-~~~~v~~~ 135 (390)
T 3b8x_A 76 RLKKGDEIIVPAVSWSTTYY---PLQQYGLRVKFVDIDINTLNIDIESLKEAVTD-STKAILTV 135 (390)
T ss_dssp SCCTTCEEEEESSSCHHHHH---HHHHTTCEEEEECBCTTTCSBCHHHHHHHCCT-TEEEEEEE
T ss_pred CCCCcCEEEECCCCcHHHHH---HHHHcCCEEEEEecCccccCcCHHHHHHHhCc-CCeEEEEE
Confidence 67889988887776555443 455678776655432 356777766643 56666664
No 130
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=23.10 E-value=50 Score=29.85 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=22.4
Q ss_pred EeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCC
Q 010774 77 WLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSN 111 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n 111 (501)
.+|-.+ +.+.|+++||++||.|.+...-
T Consensus 21 ~~T~~~-------L~~~L~~LGI~~Gd~llVHsSL 48 (286)
T 3sma_A 21 LVTRDR-------LASDLAALGVRPGGVLLVHASL 48 (286)
T ss_dssp EECHHH-------HHHHHHHHTCCTTCEEEEEECS
T ss_pred CcCHHH-------HHHHHHHcCCCCCCEEEEEech
Confidence 566655 4567889999999999998874
No 131
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=23.03 E-value=3.1e+02 Score=23.03 Aligned_cols=82 Identities=9% Similarity=-0.096 Sum_probs=45.8
Q ss_pred EeeHHHHHHHHHHHHHHHHh-------CCCCCCCEEEEEcCC----chhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHH
Q 010774 77 WLTYQEVYDAAIRFGSAMRS-------RGVNPGDRCGIYGSN----CPEWIIAMEACNSQAITYVPLYDTLGANAVEFII 145 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A~~L~~-------~gv~~gd~V~i~~~n----~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l 145 (501)
.++..|++..++.+-..+.. ..-..+-+|.+.... .....++...+...|.-++.+....+.+++...+
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~vll~~~~gd~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~ 135 (210)
T 1y80_A 56 EMFVPEVLMSANAMNAGVEVVKQSQQAFDMPSVGKIVLGTVKGDLHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAV 135 (210)
T ss_dssp -----------------------------CCCCCEEEEEEBTTCCCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHH
T ss_pred ceeHHHHHHHHHHHHHHHHHHHHHhccccCCCCCEEEEEeCCCcccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHH
Confidence 35555555544444443322 111223356665443 3555666667778999999999999999999999
Q ss_pred HhcCceEEEEcCC
Q 010774 146 NHAEVSIAFVQEN 158 (501)
Q Consensus 146 ~~~~~~~vl~~~~ 158 (501)
+..++++|..+..
T Consensus 136 ~~~~~d~v~lS~~ 148 (210)
T 1y80_A 136 KKYQPDIVGMSAL 148 (210)
T ss_dssp HHHCCSEEEEECC
T ss_pred HHcCCCEEEEecc
Confidence 9999999998874
No 132
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=22.70 E-value=2.2e+02 Score=26.85 Aligned_cols=55 Identities=13% Similarity=0.023 Sum_probs=36.9
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCce
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVS 151 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 151 (501)
.|...++++|++|+|+..-.+-.+++.+|- ..|+ .++.++. +.+.+ .+++..++.
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlAk-~~Ga~~Vi~~~~--~~~~~-~~a~~lGa~ 232 (398)
T 1kol_A 177 GAVTAGVGPGSTVYVAGAGPVGLAAAASAR-LLGAAVVIVGDL--NPARL-AHAKAQGFE 232 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEEES--CHHHH-HHHHHTTCE
T ss_pred HHHHcCCCCCCEEEEECCcHHHHHHHHHHH-HCCCCeEEEEcC--CHHHH-HHHHHcCCc
Confidence 345668999999999987666777766665 4677 5555543 34443 345677887
No 133
>3l6b_A Serine racemase; pyridoxal phosphate, PLP, isomerase; HET: PLP; 1.50A {Homo sapiens} SCOP: c.79.1.0 PDB: 3l6r_A* 3hmk_A* 3l6c_A*
Probab=22.41 E-value=1.7e+02 Score=27.13 Aligned_cols=58 Identities=10% Similarity=0.008 Sum_probs=40.8
Q ss_pred CCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 101 PGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 101 ~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
+.+.|+.. ..+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++...
T Consensus 75 ~~~~vv~~-SsGNhg~a~A~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~V~~v~~~~ 132 (346)
T 3l6b_A 75 KPKAVVTH-SSGNHGQALTYAAKLEGIPAYIVVPQTAPDCKKLAIQAYGASIVYCEPSD 132 (346)
T ss_dssp CCSCEEEE-CSSHHHHHHHHHHHHTTCCEEEEEETTSCHHHHHHHHHTTCEEEEECSSH
T ss_pred CCCEEEEe-CCCHHHHHHHHHHHHhCCCEEEEECCCCCHHHHHHHHHCCCEEEEECCCH
Confidence 33444444 34445556667788899887777666666677788899999999997653
No 134
>2vvt_A Glutamate racemase; isomerase, peptidoglycan synthesis, cell WALL biogenesis/degradation, cell shape, benzyl purine, MURI inhibitor; HET: I24 DGL; 1.65A {Enterococcus faecalis} PDB: 2jfp_A* 2jfo_A* 2jfu_A 2jfv_A* 2jfw_A*
Probab=22.40 E-value=3.3e+02 Score=24.42 Aligned_cols=79 Identities=14% Similarity=0.144 Sum_probs=52.3
Q ss_pred HHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhc
Q 010774 46 WQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQ 125 (501)
Q Consensus 46 ~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 125 (501)
..++++..+..|+...+.+. |...-++-..++.++.+++.+.+..|.+.|+ ...++.-|+...+..--.-...
T Consensus 37 ltv~~~i~~~~P~~~~iy~~---D~~~~pyG~~s~~~i~~~~~~~~~~L~~~g~----d~IVIACNTas~~~l~~lr~~~ 109 (290)
T 2vvt_A 37 LTVLKEALKQLPNERLIYLG---DTARCPYGPRPAEQVVQFTWEMADFLLKKRI----KMLVIACNTATAVALEEIKAAL 109 (290)
T ss_dssp HHHHHHHHHHCTTSCEEEEE---CTTTCCCTTSCHHHHHHHHHHHHHHHHTTTC----SEEEECCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCccEEEec---ccccCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCcchhHHHHHHHHHhC
Confidence 45778888889998887766 5544444457899999999999999988765 4566666665533222222334
Q ss_pred CCEEEE
Q 010774 126 AITYVP 131 (501)
Q Consensus 126 G~~~v~ 131 (501)
+..++-
T Consensus 110 ~iPVig 115 (290)
T 2vvt_A 110 PIPVVG 115 (290)
T ss_dssp SSCEEE
T ss_pred CCCEEc
Confidence 555554
No 135
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=22.31 E-value=3.4e+02 Score=24.58 Aligned_cols=60 Identities=17% Similarity=0.161 Sum_probs=40.5
Q ss_pred HH-HhCCCCCCCEEEEEcC-CchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 93 AM-RSRGVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 93 ~L-~~~gv~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
.| ...++++|++|+|... ..+-..++.++. ..|+.++.+.. +.+.+..+.+..++..++-
T Consensus 140 al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~~~~~~~g~~~~~~ 201 (336)
T 4b7c_A 140 ALLDVGQPKNGETVVISGAAGAVGSVAGQIAR-LKGCRVVGIAG--GAEKCRFLVEELGFDGAID 201 (336)
T ss_dssp HHHHTTCCCTTCEEEESSTTSHHHHHHHHHHH-HTTCEEEEEES--SHHHHHHHHHTTCCSEEEE
T ss_pred HHHHhcCCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHHHHHHHcCCCEEEE
Confidence 45 4458999999999998 456666655554 67887766653 3555555547778776654
No 136
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=22.19 E-value=2.5e+02 Score=25.92 Aligned_cols=76 Identities=11% Similarity=0.005 Sum_probs=46.4
Q ss_pred EeeHHHHHHHHH---HHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAI---RFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~---~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+...... ...+.|.+.++++|++|+|+....+-.+++.+|- ..|+.++.+..... .+. .++..++..+
T Consensus 152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~qlak-~~Ga~Vi~~~~~~~--~~~-~~~~lGa~~v 227 (360)
T 1piw_A 152 NIPSHLAAPLLCGGLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISK-AMGAETYVISRSSR--KRE-DAMKMGADHY 227 (360)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHTTCSTTCEEEEECCSHHHHHHHHHHH-HHTCEEEEEESSST--THH-HHHHHTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHHcCCCCCCEEEEECCCHHHHHHHHHHH-HCCCEEEEEcCCHH--HHH-HHHHcCCCEE
Confidence 367776432211 1123455678999999999999667777776665 45777666654322 222 3345677776
Q ss_pred EEc
Q 010774 154 FVQ 156 (501)
Q Consensus 154 l~~ 156 (501)
+-.
T Consensus 228 ~~~ 230 (360)
T 1piw_A 228 IAT 230 (360)
T ss_dssp EEG
T ss_pred EcC
Confidence 643
No 137
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=22.10 E-value=2.6e+02 Score=25.53 Aligned_cols=74 Identities=18% Similarity=0.257 Sum_probs=45.7
Q ss_pred EeeHHHHHHHHHH---HHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIR---FGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~---~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+....... .-+.|.+.++++|++|+|.....+-..++.+|- ..|+.++.+.. +.+.+. .++..++..+
T Consensus 137 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~GaG~vG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~lGa~~~ 212 (339)
T 1rjw_A 137 NLSFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAK-AMGLNVVAVDI--GDEKLE-LAKELGADLV 212 (339)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHHHTCCTTCEEEEECCSTTHHHHHHHHH-HTTCEEEEECS--CHHHHH-HHHHTTCSEE
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEeC--CHHHHH-HHHHCCCCEE
Confidence 3677764322111 123355558999999999998667777777665 46887666654 344443 3456777655
Q ss_pred E
Q 010774 154 F 154 (501)
Q Consensus 154 l 154 (501)
+
T Consensus 213 ~ 213 (339)
T 1rjw_A 213 V 213 (339)
T ss_dssp E
T ss_pred e
Confidence 4
No 138
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=21.93 E-value=2e+02 Score=22.45 Aligned_cols=57 Identities=7% Similarity=-0.070 Sum_probs=39.2
Q ss_pred CCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCChh
Q 010774 102 GDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENKIP 161 (501)
Q Consensus 102 gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~~~ 161 (501)
=|.|.++.| .....-++..|...|.-.+.+.+..-.+++....+..+.+ +++..+..
T Consensus 70 vDlvii~vp-~~~v~~v~~~~~~~g~~~i~~~~~~~~~~l~~~a~~~Gi~--~igpnc~g 126 (138)
T 1y81_A 70 VDVIVFVVP-PKVGLQVAKEAVEAGFKKLWFQPGAESEEIRRFLEKAGVE--YSFGRCIM 126 (138)
T ss_dssp CCEEEECSC-HHHHHHHHHHHHHTTCCEEEECTTSCCHHHHHHHHHHTCE--EECSCCHH
T ss_pred CCEEEEEeC-HHHHHHHHHHHHHcCCCEEEEcCccHHHHHHHHHHHCCCE--EEcCCcce
Confidence 466777777 4555555667777888777777776778888888888776 34555443
No 139
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=21.74 E-value=4.6e+02 Score=25.78 Aligned_cols=61 Identities=13% Similarity=0.053 Sum_probs=44.5
Q ss_pred hCC-CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 96 SRG-VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 96 ~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
+.| +++|+.|+.. ..+-.-..+.++|...|..+..+-|...+..-...++..++.++++..
T Consensus 106 ~~g~~~~g~~vv~~-ssGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~ 167 (527)
T 3pc3_A 106 EQGLLKPGYTIIEP-TSGNTGIGLAMACAVKGYKCIIVMPEKMSNEKVSALRTLGAKIIRTPT 167 (527)
T ss_dssp HHTCCCTTCEEEEE-CSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHHHTTCEEEEECT
T ss_pred HcCCCCCCCEEEEe-CCCHHHHHHHHHHHHhCCeEEEEEcCCCCHHHHHHHHHCCCEEEEeCC
Confidence 445 5788877654 444444556668888898887776766666777888999999999975
No 140
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=21.49 E-value=2.2e+02 Score=26.64 Aligned_cols=55 Identities=13% Similarity=0.096 Sum_probs=35.5
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~ 157 (501)
.++||.|.+-.+.... ..-++...|+.+++++. .+.+++...++..++++++++.
T Consensus 140 ~~~gd~Vl~~~~~~~~---~~~~~~~~g~~~~~~~~-~d~~~le~~l~~~~~~~vi~~~ 194 (409)
T 3kki_A 140 CQPNTNVYIDFFAHMS---LWEGARYANAQAHPFMH-NNCDHLRMLIQRHGPGIIVVDS 194 (409)
T ss_dssp CCTTCEEEEETTSCHH---HHHHHHHTTCEEEEECT-TCHHHHHHHHHHHCSCEEEEES
T ss_pred cCCCCEEEECCCcCHH---HHHHHHHcCCeEEEecC-CCHHHHHHHHHhcCCeEEEECC
Confidence 4678877765554433 33455667777777643 5677777777766667777664
No 141
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=21.44 E-value=3.2e+02 Score=25.74 Aligned_cols=54 Identities=11% Similarity=0.041 Sum_probs=37.8
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
++++|++|+|+....+-.+++.+|- ..|+ .++.++.. ++.+ .+++..+++.++.
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak-~~Ga~~Vi~~~~~--~~~~-~~~~~lGa~~vi~ 264 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILK-HAGASKVILSEPS--EVRR-NLAKELGADHVID 264 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSC--HHHH-HHHHHHTCSEEEC
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEECCC--HHHH-HHHHHcCCCEEEc
Confidence 6999999999988666777666665 5687 66666542 3333 4556778877764
No 142
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=21.27 E-value=2.2e+02 Score=26.09 Aligned_cols=53 Identities=8% Similarity=-0.171 Sum_probs=36.2
Q ss_pred CCCCCCEEEEEcCCchhHHHHHHHHHhc-CCEEEEecCCCCHHHHHHHHHhcCceEEE
Q 010774 98 GVNPGDRCGIYGSNCPEWIIAMEACNSQ-AITYVPLYDTLGANAVEFIINHAEVSIAF 154 (501)
Q Consensus 98 gv~~gd~V~i~~~n~~~~~~~~lA~~~~-G~~~v~l~~~~~~~~l~~~l~~~~~~~vl 154 (501)
++ +|++|+|+....+-.+++.+|-... |+.++.+.. +.+.+ ..++..+++.++
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~vi 221 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISR--SKKHR-DFALELGADYVS 221 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS--CHHHH-HHHHHHTCSEEE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeC--CHHHH-HHHHHhCCCEEe
Confidence 78 9999999999667777777776543 777666554 34443 334566776665
No 143
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=20.87 E-value=2.3e+02 Score=26.07 Aligned_cols=74 Identities=14% Similarity=0.093 Sum_probs=45.8
Q ss_pred EeeHHHHHHHHHHHH---HHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 77 WLTYQEVYDAAIRFG---SAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A---~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
.+++.+..-. ..++ +.|...++++|++|+|.....+-.+++.+|- ..|+.++.++. +.+.+ ..++..+++.+
T Consensus 142 ~~~~~~aa~~-~~~~ta~~al~~~~~~~g~~VlV~GaG~vG~~a~qla~-~~Ga~Vi~~~~--~~~~~-~~~~~lGa~~~ 216 (352)
T 1e3j_A 142 NVSLEEGALL-EPLSVGVHACRRAGVQLGTTVLVIGAGPIGLVSVLAAK-AYGAFVVCTAR--SPRRL-EVAKNCGADVT 216 (352)
T ss_dssp TSCHHHHHTH-HHHHHHHHHHHHHTCCTTCEEEEECCSHHHHHHHHHHH-HTTCEEEEEES--CHHHH-HHHHHTTCSEE
T ss_pred CCCHHHHHhh-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCEEEEEcC--CHHHH-HHHHHhCCCEE
Confidence 3677765422 2222 2344558999999999987666777766665 46876555543 34443 34567788766
Q ss_pred EE
Q 010774 154 FV 155 (501)
Q Consensus 154 l~ 155 (501)
+.
T Consensus 217 ~~ 218 (352)
T 1e3j_A 217 LV 218 (352)
T ss_dssp EE
T ss_pred Ec
Confidence 64
No 144
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=20.80 E-value=4.7e+02 Score=23.63 Aligned_cols=59 Identities=8% Similarity=0.067 Sum_probs=40.0
Q ss_pred HHhC-CCCCCCEEEEEcC-CchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEc
Q 010774 94 MRSR-GVNPGDRCGIYGS-NCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQ 156 (501)
Q Consensus 94 L~~~-gv~~gd~V~i~~~-n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~ 156 (501)
|.+. ++++|++|+|... ..+-..++.+|. ..|+.++.+.. +.+.+. .++..++..++..
T Consensus 140 l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~-~~Ga~Vi~~~~--~~~~~~-~~~~~ga~~~~~~ 200 (334)
T 3qwb_A 140 TNEAYHVKKGDYVLLFAAAGGVGLILNQLLK-MKGAHTIAVAS--TDEKLK-IAKEYGAEYLINA 200 (334)
T ss_dssp HHTTSCCCTTCEEEESSTTBHHHHHHHHHHH-HTTCEEEEEES--SHHHHH-HHHHTTCSEEEET
T ss_pred HHHhccCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeC--CHHHHH-HHHHcCCcEEEeC
Confidence 4443 7999999999994 556666666554 57887777664 344544 5567788777654
No 145
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=20.78 E-value=2.8e+02 Score=25.78 Aligned_cols=56 Identities=9% Similarity=0.147 Sum_probs=37.9
Q ss_pred hCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCceEEEE
Q 010774 96 SRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVSIAFV 155 (501)
Q Consensus 96 ~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~~vl~ 155 (501)
..++++|++|+|+..-.+-.+++.+|-. .|+ .++.++.. .+.+ .+++..+++.++.
T Consensus 186 ~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~~--~~~~-~~a~~lGa~~vi~ 242 (373)
T 1p0f_A 186 TAKVTPGSTCAVFGLGGVGFSAIVGCKA-AGASRIIGVGTH--KDKF-PKAIELGATECLN 242 (373)
T ss_dssp TTCCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECSC--GGGH-HHHHHTTCSEEEC
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCeEEEECCC--HHHH-HHHHHcCCcEEEe
Confidence 4589999999999876677777777654 577 56666543 3333 3456778877664
No 146
>2oho_A Glutamate racemase; isomerase; 2.25A {Streptococcus pyogenes m1 gas} PDB: 2ohg_A 2ohv_A*
Probab=20.69 E-value=3e+02 Score=24.40 Aligned_cols=79 Identities=11% Similarity=0.188 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCCcceEEeeccCCCCCccEEeeHHHHHHHHHHHHHHHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhc
Q 010774 46 WQFFCDSAKRIPNNQMLGGRKVSDGKVGPYVWLTYQEVYDAAIRFGSAMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQ 125 (501)
Q Consensus 46 ~~~l~~~a~~~p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~~A~~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~ 125 (501)
..++++..+..|+...+.+. |....++-..++.++...+.+.+..|.+.|+ ...++.-|+...+..--.-...
T Consensus 25 ltv~~~i~~~~P~~~~iy~~---D~~~~Pyg~~s~~~i~~~~~~~~~~L~~~g~----d~iviaCNTas~~~l~~lr~~~ 97 (273)
T 2oho_A 25 LTVVCELIRQLPHEKIVYIG---DSARAPYGPRPKKQIKEYTWELVNFLLTQNV----KMIVFACNTATAVAWEEVKAAL 97 (273)
T ss_dssp HHHHHHHHHHCTTCCEEEEE---CGGGCCCTTSCHHHHHHHHHHHHHHHHTTTC----SEEEECCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHCCCCCEEEEe---CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC----CEEEEeCchHhHHHHHHHHHhC
Confidence 35788888889998877766 5543444457899999999999999987665 4556666665543211112234
Q ss_pred CCEEEE
Q 010774 126 AITYVP 131 (501)
Q Consensus 126 G~~~v~ 131 (501)
+..++-
T Consensus 98 ~iPvig 103 (273)
T 2oho_A 98 DIPVLG 103 (273)
T ss_dssp SSCEEE
T ss_pred CCCEEe
Confidence 555554
No 147
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=20.67 E-value=4.6e+02 Score=25.35 Aligned_cols=70 Identities=9% Similarity=0.030 Sum_probs=49.9
Q ss_pred HHHHHHHhCC-CCCCCEEEEEcCCchhHHHHHHHHHh----cC--CEEEEecCCCC-H------HHHHHHHHhcCceEEE
Q 010774 89 RFGSAMRSRG-VNPGDRCGIYGSNCPEWIIAMEACNS----QA--ITYVPLYDTLG-A------NAVEFIINHAEVSIAF 154 (501)
Q Consensus 89 ~~A~~L~~~g-v~~gd~V~i~~~n~~~~~~~~lA~~~----~G--~~~v~l~~~~~-~------~~l~~~l~~~~~~~vl 154 (501)
++.+.+.+.+ +.++++|++.+.-+.|+++++..+.. .| ..++-++..+. . +.+..+.+..+..+.+
T Consensus 4 kv~~~i~~~~l~~~~~~vlVa~SGG~DS~~Ll~ll~~~~~~~~~~v~avhvdhglrg~~s~~~~~~v~~~~~~lgi~~~v 83 (464)
T 3a2k_A 4 KVRAFIHRHQLLSEGAAVIVGVSGGPDSLALLHVFLSLRDEWKLQVIAAHVDHMFRGRESEEEMEFVKRFCVERRILCET 83 (464)
T ss_dssp HHHHHHHHTCSSSCSSBEEEECCSSHHHHHHHHHHHHHHHTTTCBCEEEEEECTTCTHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHcCCCCCCCEEEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEEEEECCCCccccHHHHHHHHHHHHHcCCcEEE
Confidence 4556666665 68899999999999999988877776 34 55677777765 2 2345566677777777
Q ss_pred EcCC
Q 010774 155 VQEN 158 (501)
Q Consensus 155 ~~~~ 158 (501)
.+-+
T Consensus 84 ~~~~ 87 (464)
T 3a2k_A 84 AQID 87 (464)
T ss_dssp EECC
T ss_pred EEec
Confidence 6554
No 148
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=20.57 E-value=2.9e+02 Score=25.47 Aligned_cols=58 Identities=12% Similarity=0.022 Sum_probs=33.8
Q ss_pred CCCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEe--cCC--CCHHHHHHHHHh-cCceEEEEcC
Q 010774 99 VNPGDRCGIYGSNCPEWIIAMEACNSQAITYVPL--YDT--LGANAVEFIINH-AEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l--~~~--~~~~~l~~~l~~-~~~~~vl~~~ 157 (501)
+++||.|.+..+...... ..-.+...|+.++.+ ++. .+.+++...++. .++++|++..
T Consensus 80 ~~~gd~Vl~~~~~~~~~~-~~~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~~~v~~~~ 142 (392)
T 2z9v_A 80 ISPDDVVLNLASGVYGKG-FGYWAKRYSPHLLEIEVPYNEAIDPQAVADMLKAHPEITVVSVCH 142 (392)
T ss_dssp CCTTCCEEEEESSHHHHH-HHHHHHHHCSCEEEEECCTTSCCCHHHHHHHHHHCTTCCEEEEES
T ss_pred cCCCCEEEEecCCcccHH-HHHHHHHcCCceEEeeCCCCCCCCHHHHHHHHhcCCCCcEEEEec
Confidence 468888888776554432 112223456555444 332 467888888864 3667776654
No 149
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=20.55 E-value=3e+02 Score=25.62 Aligned_cols=76 Identities=13% Similarity=0.049 Sum_probs=47.4
Q ss_pred EeeHHHHHHHHHHHH--H-HH-HhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCce
Q 010774 77 WLTYQEVYDAAIRFG--S-AM-RSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVS 151 (501)
Q Consensus 77 ~~Ty~el~~~v~~~A--~-~L-~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 151 (501)
.+++.+.......++ . .+ ...++++|++|+|+..-.+-.+++.+|- ..|+ .++.++... +.+ .+++..++.
T Consensus 165 ~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~-~~Ga~~Vi~~~~~~--~~~-~~a~~lGa~ 240 (378)
T 3uko_A 165 TAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAK-TAGASRIIGIDIDS--KKY-ETAKKFGVN 240 (378)
T ss_dssp TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHH-HHTCSCEEEECSCT--THH-HHHHTTTCC
T ss_pred CCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHH-HcCCCeEEEEcCCH--HHH-HHHHHcCCc
Confidence 367777654432222 2 23 3458999999999988666776666665 5577 566665433 333 356778887
Q ss_pred EEEEc
Q 010774 152 IAFVQ 156 (501)
Q Consensus 152 ~vl~~ 156 (501)
.++..
T Consensus 241 ~vi~~ 245 (378)
T 3uko_A 241 EFVNP 245 (378)
T ss_dssp EEECG
T ss_pred EEEcc
Confidence 76643
No 150
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=20.35 E-value=3.4e+02 Score=24.77 Aligned_cols=75 Identities=16% Similarity=0.066 Sum_probs=45.8
Q ss_pred eeHHHHHHHHHH---HHHHHHhCCCCCCCEEEEEcCC-chhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEE
Q 010774 78 LTYQEVYDAAIR---FGSAMRSRGVNPGDRCGIYGSN-CPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIA 153 (501)
Q Consensus 78 ~Ty~el~~~v~~---~A~~L~~~gv~~gd~V~i~~~n-~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~v 153 (501)
+++.+....... .-+.|.+.++++|++|+|.... .+-..++.++....|+.++.++.. .+.+. .++..++..+
T Consensus 144 ~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~--~~~~~-~~~~~g~~~~ 220 (347)
T 1jvb_A 144 LNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVR--EEAVE-AAKRAGADYV 220 (347)
T ss_dssp SCHHHHGGGGTHHHHHHHHHHHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESS--HHHHH-HHHHHTCSEE
T ss_pred CCHHHcccchhhHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCC--HHHHH-HHHHhCCCEE
Confidence 566665422211 2234556789999999999988 677777776665438776666542 34433 3355666655
Q ss_pred EE
Q 010774 154 FV 155 (501)
Q Consensus 154 l~ 155 (501)
+-
T Consensus 221 ~~ 222 (347)
T 1jvb_A 221 IN 222 (347)
T ss_dssp EE
T ss_pred ec
Confidence 53
No 151
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=20.35 E-value=2.9e+02 Score=25.97 Aligned_cols=55 Identities=18% Similarity=0.123 Sum_probs=37.5
Q ss_pred HHHhCCCCCCCEEEEEcCCchhHHHHHHHHHhcCC-EEEEecCCCCHHHHHHHHHhcCce
Q 010774 93 AMRSRGVNPGDRCGIYGSNCPEWIIAMEACNSQAI-TYVPLYDTLGANAVEFIINHAEVS 151 (501)
Q Consensus 93 ~L~~~gv~~gd~V~i~~~n~~~~~~~~lA~~~~G~-~~v~l~~~~~~~~l~~~l~~~~~~ 151 (501)
.|...++++|++|+|+....+-.+++.+|-. .|+ .++.++. +.+.+ ..++..++.
T Consensus 177 al~~~~~~~g~~VlV~GaG~vG~~aiqlak~-~Ga~~Vi~~~~--~~~~~-~~a~~lGa~ 232 (398)
T 2dph_A 177 GCVSAGVKPGSHVYIAGAGPVGRCAAAGARL-LGAACVIVGDQ--NPERL-KLLSDAGFE 232 (398)
T ss_dssp HHHHTTCCTTCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEES--CHHHH-HHHHTTTCE
T ss_pred HHHHcCCCCCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEEcC--CHHHH-HHHHHcCCc
Confidence 3556689999999999876667777777654 577 5666554 33444 345677875
No 152
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=20.14 E-value=2e+02 Score=27.57 Aligned_cols=59 Identities=10% Similarity=0.156 Sum_probs=36.6
Q ss_pred CCCCCEEEEEc-CCchhHHHHH--------HHHHhcCCEEEEecCC----CCHHHHHHHHHh-cCceEEEEcC
Q 010774 99 VNPGDRCGIYG-SNCPEWIIAM--------EACNSQAITYVPLYDT----LGANAVEFIINH-AEVSIAFVQE 157 (501)
Q Consensus 99 v~~gd~V~i~~-~n~~~~~~~~--------lA~~~~G~~~v~l~~~----~~~~~l~~~l~~-~~~~~vl~~~ 157 (501)
+++||.|.+.. +....+.-.+ -.+...|+.+..++.. .+.+++...++. .++++|+++.
T Consensus 112 l~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~ 184 (427)
T 3i16_A 112 LRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQVDLKEDGKPNLEEIEKVLKEDESITLVHIQR 184 (427)
T ss_dssp CCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEECCCCTTSSCCHHHHHHHHHTCTTEEEEEEEC
T ss_pred hCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEEecCccCCCcCHHHHHHHhhCCCCCEEEEEEc
Confidence 56888887765 4333333222 1234567777776653 567788877764 5678888766
No 153
>4h27_A L-serine dehydratase/L-threonine deaminase; PLP dependent typeii, PLP binding, liver, lyase; HET: LLP; 1.30A {Homo sapiens} PDB: 1p5j_A* 1pwh_A* 1pwe_A*
Probab=20.10 E-value=1.9e+02 Score=27.11 Aligned_cols=54 Identities=9% Similarity=-0.053 Sum_probs=39.5
Q ss_pred EEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCCC
Q 010774 106 GIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQENK 159 (501)
Q Consensus 106 ~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~~ 159 (501)
++....+-.-..+.++|.+.|..++.+-|...+......++..++.+++++...
T Consensus 96 vv~aSsGN~g~alA~aa~~~G~~~~iv~p~~~~~~k~~~~~~~GA~Vv~v~~~~ 149 (364)
T 4h27_A 96 FVCSSSGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLKNEGATVKVVGELL 149 (364)
T ss_dssp EEECCSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHTTTCEEEEECSST
T ss_pred EEEeCCChHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHcCCEEEEECCCH
Confidence 334444555566677788899888777676667777788899999999998654
No 154
>2ayi_A Aminopeptidase T; metallopeptidase, hydrolase; 3.70A {Thermus thermophilus} SCOP: e.60.1.1
Probab=20.06 E-value=2.3e+02 Score=27.07 Aligned_cols=51 Identities=4% Similarity=0.038 Sum_probs=36.8
Q ss_pred HHHHHHHHHHHHHhC--CCCCCCEEEEEcCCc-hhHH-HHHHHHHhcCCEEEEec
Q 010774 83 VYDAAIRFGSAMRSR--GVNPGDRCGIYGSNC-PEWI-IAMEACNSQAITYVPLY 133 (501)
Q Consensus 83 l~~~v~~~A~~L~~~--gv~~gd~V~i~~~n~-~~~~-~~~lA~~~~G~~~v~l~ 133 (501)
+..+.+++|..+.+. ++++|+.|.|..+.. .+++ .+.-++.++|+.++.+.
T Consensus 4 ~~~~l~k~A~~~v~~~~~lq~Ge~vlI~~~~~~~~l~r~l~~~a~~~Ga~~v~v~ 58 (408)
T 2ayi_A 4 FKRNLEKLAELAIRVGLNLEKGQEVIATAPIEAVDFVRLLAEKAYREGASLFTVI 58 (408)
T ss_dssp CHHHHHHHHHHHHHTTTCCCTTCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHHHHHhCcCCCCCCEEEEEECCchHHHHHHHHHHHHHcCCceEEEE
Confidence 345778888888765 689999999999854 3333 45556778888777543
No 155
>1y7l_A O-acetylserine sulfhydrylase, O-acetylserine (thiol)-lyase; X-RAY crystallography, sulfhydrylase; HET: LLP; 1.55A {Haemophilus influenzae} SCOP: c.79.1.1 PDB: 3iqg_X* 3iqh_X* 3iqi_X* 1fcj_A* 1oas_A* 1d6s_A*
Probab=20.05 E-value=4.8e+02 Score=23.47 Aligned_cols=63 Identities=6% Similarity=-0.039 Sum_probs=42.7
Q ss_pred HhCCC-CCCCEEEEEcCCchhHHHHHHHHHhcCCEEEEecCCCCHHHHHHHHHhcCceEEEEcCC
Q 010774 95 RSRGV-NPGDRCGIYGSNCPEWIIAMEACNSQAITYVPLYDTLGANAVEFIINHAEVSIAFVQEN 158 (501)
Q Consensus 95 ~~~gv-~~gd~V~i~~~n~~~~~~~~lA~~~~G~~~v~l~~~~~~~~l~~~l~~~~~~~vl~~~~ 158 (501)
.+.|. ++|+.|+... .+-.-..+.++|.+.|..+..+-|...+..-...++..++++++++..
T Consensus 54 ~~~g~~~~~~~vv~~s-sGN~g~a~A~~a~~~G~~~~iv~p~~~~~~k~~~~~~~GA~v~~~~~~ 117 (316)
T 1y7l_A 54 EKDGTLTKGKEIVDAT-SGNTGIALAYVAAARGYKITLTMPETMSLERKRLLCGLGVNLVLTEGA 117 (316)
T ss_dssp HHTTSSCTTCEEEESC-CSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHHHTTCEEEEECGG
T ss_pred HHcCCCCCCCEEEEeC-CcHHHHHHHHHHHHcCCcEEEEECCCCCHHHHHHHHHcCCEEEEeCCC
Confidence 44454 6676665544 344445566667789987766666555566667889999999998764
Done!