BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010788
(501 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Query: 396 FSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQG-DHEFCSEVE 454
FS EL++A+ FS N L GGFG V++G L DG VAVK+ K QG + +F +EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 455 VLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDS 491
++S A HRN++ L GFC+ RLLVY Y+ NGS+ S
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVAS 124
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 65/99 (65%), Gaps = 1/99 (1%)
Query: 396 FSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQG-DHEFCSEVE 454
FS EL++A+ F N L GGFG V++G L DG VAVK+ K +QG + +F +EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 455 VLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
++S A HRN++ L GFC+ RLLVY Y+ NGS+ S L
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCL 118
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 399 AELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSC 458
+LE AT F + G FG V++GVL DG VA+K+ SSQG EF +E+E LS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 459 AQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNFL 498
+H ++V LIGFC E +L+Y+Y+ NG+L HLYG+ L
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/100 (46%), Positives = 63/100 (63%)
Query: 399 AELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSC 458
+LE AT F + G FG V++GVL DG VA+K+ SSQG EF +E+E LS
Sbjct: 32 VDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSF 91
Query: 459 AQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNFL 498
+H ++V LIGFC E +L+Y+Y+ NG+L HLYG+ L
Sbjct: 92 CRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDL 131
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 396 FSYAELELATGGFSQ------ANFLAEGGFGSVHRGVLPDGQAVAVKQH----KLASSQG 445
FS+ EL+ T F + N + EGGFG V++G + + VAVK+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 446 DHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
+F E++V++ QH N+V L+GF + LVY Y+ NGSL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 396 FSYAELELATGGFSQ------ANFLAEGGFGSVHRGVLPDGQAVAVKQH----KLASSQG 445
FS+ EL+ T F + N + EGGFG V++G + + VAVK+ + + +
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 73
Query: 446 DHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
+F E++V++ QH N+V L+GF + LVY Y+ NGSL
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 117
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 11/104 (10%)
Query: 396 FSYAELELATGGFSQ------ANFLAEGGFGSVHRGVLPDGQAVAVKQH----KLASSQG 445
FS+ EL+ T F + N + EGGFG V++G + + VAVK+ + + +
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 67
Query: 446 DHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
+F E++V++ QH N+V L+GF + LVY Y+ NGSL
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSL 111
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 414 LAEGGFGSVH----RGVLP--DGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
L EG FG V +LP D VAVK K AS +F E E+L+ QH+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHL 493
G C E R L+V+EY+ +G L+ L
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFL 111
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 414 LAEGGFGSVH----RGVLP--DGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
L EG FG V +LP D VAVK K AS +F E E+L+ QH+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHL 493
G C E R L+V+EY+ +G L+ L
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFL 134
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 6/86 (6%)
Query: 414 LAEGGFGSVH----RGVLP--DGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
L EG FG V +LP D VAVK K AS +F E E+L+ QH+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHL 493
G C E R L+V+EY+ +G L+ L
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFL 105
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 11/104 (10%)
Query: 396 FSYAELELATGGFSQ------ANFLAEGGFGSVHRGVLPDGQAVAVKQH----KLASSQG 445
FS+ EL+ T F + N EGGFG V++G + + VAVK+ + + +
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEEL 64
Query: 446 DHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
+F E++V + QH N+V L+GF + LVY Y NGSL
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSL 108
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 6/86 (6%)
Query: 414 LAEGGFGSVH----RGVLP--DGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
L EG FG V + P D VAVK K AS +F E E+L+ QH ++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHL 493
G C+E ++V+EY+ +G L+ L
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFL 106
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 49 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 108
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 109 GVCYSAGRRNLKLIMEYLPYGSLRDYL 135
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSV---HRGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYL 108
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K K S D +F E EV+ H +V
Sbjct: 27 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLV 85
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV+E++ +G L +L
Sbjct: 86 QLYGVCLEQAPICLVFEFMEHGCLSDYL 113
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYL 111
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYL 103
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYL 109
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYL 102
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYL 110
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYL 104
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYL 105
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYL 107
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ EY+ GSL +L
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYL 122
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 42/98 (42%), Gaps = 1/98 (1%)
Query: 396 FSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEV 455
Y E+ + L G FG V G VA+K K S D EF E +V
Sbjct: 14 LGYGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKV 72
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ H +V L G C + R ++ EY+ NG L ++L
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 42/96 (43%), Gaps = 1/96 (1%)
Query: 398 YAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLS 457
Y E+ + L G FG V G VA+K K S D EF E +V+
Sbjct: 16 YGSWEIDPKDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMM 74
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H +V L G C + R ++ EY+ NG L ++L
Sbjct: 75 NLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYL 110
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VA+K K S D EF E +V+ H +V L G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 474 DRRRLLVYEYICNGSLDSHL 493
R ++ EY+ NG L ++L
Sbjct: 75 QRPIFIITEYMANGCLLNYL 94
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VA+K K S D EF E +V+ H +V L G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 474 DRRRLLVYEYICNGSLDSHL 493
R ++ EY+ NG L ++L
Sbjct: 82 QRPIFIITEYMANGCLLNYL 101
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VA+K K S D EF E +V+ H +V L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 474 DRRRLLVYEYICNGSLDSHL 493
R ++ EY+ NG L ++L
Sbjct: 76 QRPIFIITEYMANGCLLNYL 95
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VA+K K S D EF E +V+ H +V L G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 474 DRRRLLVYEYICNGSLDSHL 493
R ++ EY+ NG L ++L
Sbjct: 76 QRPIFIITEYMANGCLLNYL 95
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VA+K K S D EF E +V+ H +V L G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSED-EFIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 474 DRRRLLVYEYICNGSLDSHL 493
R ++ EY+ NG L ++L
Sbjct: 71 QRPIFIITEYMANGCLLNYL 90
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K + + + +F E EV+ H +V
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV+E++ +G L +L
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL 93
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K + + + +F E EV+ H +V
Sbjct: 10 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 68
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV+E++ +G L +L
Sbjct: 69 QLYGVCLEQAPICLVFEFMEHGCLSDYL 96
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVH---RGVLPD--GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLI 468
L +G FGSV L D G+ VAVK+ + ++ + +F E+E+L QH N+V
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 469 GFCIEDRRR--LLVYEYICNGSLDSHL 493
G C RR L+ E++ GSL +L
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYL 107
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K + + + +F E EV+ H +V
Sbjct: 5 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 63
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV+E++ +G L +L
Sbjct: 64 QLYGVCLEQAPICLVFEFMEHGCLSDYL 91
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K + + + +F E EV+ H +V
Sbjct: 7 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 65
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV+E++ +G L +L
Sbjct: 66 QLYGVCLEQAPICLVFEFMEHGCLSDYL 93
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 374 GPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD 429
G P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 1 GSPMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKD 51
Query: 430 ----GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEY 483
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 52 KPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEY 111
Query: 484 ICNGSLDSHL 493
G+L +L
Sbjct: 112 ASKGNLREYL 121
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 383 QHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLA 441
++K V+G P +Y + E+ + + L G +G V+ GV VAVK K
Sbjct: 197 RNKPTVYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 253
Query: 442 SSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ + + EF E V+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 254 TMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 304
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 414 LAEGGFGSVHRG-VLPDGQAVAVKQHKLASSQGD-------HEFCSEVEVLSCAQHRNVV 465
+ +GGFG VH+G ++ D VA+K L S+G+ EF EV ++S H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G R +V E++ G L L
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRL 112
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 65 KEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 414 LAEGGFGSVHRG-VLPDGQAVAVKQHKLASSQGD-------HEFCSEVEVLSCAQHRNVV 465
+ +GGFG VH+G ++ D VA+K L S+G+ EF EV ++S H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G R +V E++ G L L
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRL 112
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 10/88 (11%)
Query: 414 LAEGGFGSVHRG-VLPDGQAVAVKQHKLASSQGD-------HEFCSEVEVLSCAQHRNVV 465
+ +GGFG VH+G ++ D VA+K L S+G+ EF EV ++S H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G R +V E++ G L L
Sbjct: 87 KLYGLMHNPPR--MVMEFVPCGDLYHRL 112
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 383 QHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLA 441
++K V+G P +Y + E+ + + L G +G V+ GV VAVK K
Sbjct: 239 RNKPTVYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 295
Query: 442 SSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ + + EF E V+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 296 TMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 346
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 55/112 (49%), Gaps = 5/112 (4%)
Query: 383 QHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLA 441
++K ++G P +Y + E+ + + L G +G V+ GV VAVK K
Sbjct: 200 RNKPTIYGVSP---NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED 256
Query: 442 SSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ + + EF E V+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 257 TMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 307
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 64/143 (44%), Gaps = 21/143 (14%)
Query: 361 VREAISLSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFG 420
VR LS A P L + +++ P + P+W E + L EG FG
Sbjct: 47 VRITTRLSSTA--DTPMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGCFG 95
Query: 421 SVHR----GVLPD----GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGF 470
V G+ D VAVK K +++ D + SE+E++ +H+N++ L+G
Sbjct: 96 QVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGA 155
Query: 471 CIEDRRRLLVYEYICNGSLDSHL 493
C +D ++ EY G+L +L
Sbjct: 156 CTQDGPLYVIVEYASKGNLREYL 178
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 4/88 (4%)
Query: 409 SQANFLAE---GGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
S+ F+ E G FG VH G + VA+K + + + +F E EV+ H +V
Sbjct: 8 SELTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIR-EGAMSEEDFIEEAEVMMKLSHPKLV 66
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L G C+E LV E++ +G L +L
Sbjct: 67 QLYGVCLEQAPICLVTEFMEHGCLSDYL 94
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 414 LAEGGFGS----VHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG HR G+ + +K+ + F EV+V+ C +H NV+ IG
Sbjct: 18 LGKGCFGQAIKVTHRET---GEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 470 FCIEDRRRLLVYEYICNGSL 489
+D+R + EYI G+L
Sbjct: 75 VLYKDKRLNFITEYIKGGTL 94
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 6 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKP 56
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 57 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 116
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 117 KGNLREYL 124
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 1 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGCFGQVVMAEAVGIDKDKP 51
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 52 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYAS 111
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 112 KGNLREYL 119
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 378 LCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG------- 430
L + +++ P + PRW EL L EG FG V VL +
Sbjct: 50 LAGVSEYELP---EDPRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDK 97
Query: 431 ----QAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYI 484
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 98 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 157
Query: 485 CNGSLDSHL 493
G+L +L
Sbjct: 158 SKGNLREYL 166
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 108
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 39 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 98
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 99 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 135
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 29 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 88
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 89 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 125
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 47/97 (48%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V EY+ NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFL 137
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 36/69 (52%), Gaps = 6/69 (8%)
Query: 411 ANFLAEGGFGSVHRGVLP--DGQA--VAVKQHKL--ASSQGDHEFCSEVEVLSCAQHRNV 464
L EG FGSV G L DG + VAVK KL +S + EF SE + H NV
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 465 VMLIGFCIE 473
+ L+G CIE
Sbjct: 99 IRLLGVCIE 107
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 101
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 105
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 6/86 (6%)
Query: 414 LAEGGFGSV------HRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
L EG FG V + D VAVK K + +F E E+L+ QH ++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHL 493
G C + ++V+EY+ +G L+ L
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFL 108
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 378 LCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG------- 430
+ + +++ P + PRW EL L EG FG V VL +
Sbjct: 9 MAGVSEYELP---EDPRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDK 56
Query: 431 ----QAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYI 484
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 485 CNGSLDSHL 493
G+L +L
Sbjct: 117 SKGNLREYL 125
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVK--QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFC 471
+ G FG+VHR G VAVK + ++ +EF EV ++ +H N+V+ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 472 IEDRRRLLVYEYICNGSLDSHLY 494
+ +V EY+ GSL L+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH 126
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG-----------QAVAVKQHKLA 441
PRW EL L EG FG V VL + VAVK K
Sbjct: 10 PRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSD 60
Query: 442 SSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+++ D + SE+E++ +H+N++ L+G C +D ++ EY G+L +L
Sbjct: 61 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 114
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 5 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 63
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 64 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 101
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 378 LCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG------- 430
+ + +++ P + PRW EL L EG FG V VL +
Sbjct: 9 MAGVSEYELP---EDPRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDK 56
Query: 431 ----QAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYI 484
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 485 CNGSLDSHL 493
G+L +L
Sbjct: 117 SKGNLREYL 125
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG-----------QAVAVKQHKLA 441
PRW EL L EG FG V VL + VAVK K
Sbjct: 13 PRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSD 63
Query: 442 SSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+++ D + SE+E++ +H+N++ L+G C +D ++ EY G+L +L
Sbjct: 64 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 117
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVK--QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFC 471
+ G FG+VHR G VAVK + ++ +EF EV ++ +H N+V+ +G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 472 IEDRRRLLVYEYICNGSLDSHLY 494
+ +V EY+ GSL L+
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLH 126
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 8 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 66
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 67 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 104
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG-----------QAVAVKQHKLA 441
PRW EL L EG FG V VL + VAVK K
Sbjct: 14 PRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSD 64
Query: 442 SSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+++ D + SE+E++ +H+N++ L+G C +D ++ EY G+L +L
Sbjct: 65 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 118
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 25/129 (19%)
Query: 378 LCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG------- 430
+ + +++ P + PRW EL L EG FG V VL +
Sbjct: 9 MAGVSEYELP---EDPRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDK 56
Query: 431 ----QAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYI 484
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ EY
Sbjct: 57 PNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYA 116
Query: 485 CNGSLDSHL 493
G+L +L
Sbjct: 117 SKGNLREYL 125
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYL 100
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG-----------QAVAVKQHKLA 441
PRW EL L EG FG V VL + VAVK K
Sbjct: 6 PRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSD 56
Query: 442 SSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+++ D + SE+E++ +H+N++ L+G C +D ++ EY G+L +L
Sbjct: 57 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 110
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 51/114 (44%), Gaps = 22/114 (19%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDG-----------QAVAVKQHKLA 441
PRW EL L EG FG V VL + VAVK K
Sbjct: 21 PRW------ELPRDRLVLGKPLGEGAFGQV---VLAEAIGLDKDKPNRVTKVAVKMLKSD 71
Query: 442 SSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+++ D + SE+E++ +H+N++ L+G C +D ++ EY G+L +L
Sbjct: 72 ATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLREYL 125
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 9 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 67
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 68 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 105
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/91 (25%), Positives = 44/91 (48%), Gaps = 6/91 (6%)
Query: 409 SQANFLAEGGFGSVHRGVLPDGQA-----VAVKQHKLASSQGDH-EFCSEVEVLSCAQHR 462
++ + G FG V++G+L VA+K K ++ +F E ++ H
Sbjct: 47 TRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHH 106
Query: 463 NVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
N++ L G + + +++ EY+ NG+LD L
Sbjct: 107 NIIRLEGVISKYKPMMIITEYMENGALDKFL 137
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/128 (25%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 376 PPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHR----GVLPD-- 429
P L + +++ P + P+W E + L EG FG V G+ D
Sbjct: 14 PMLAGVSEYELP---EDPKW------EFPRDKLTLGKPLGEGAFGQVVMAEAVGIDKDKP 64
Query: 430 --GQAVAVKQHKLASSQGD-HEFCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYIC 485
VAVK K +++ D + SE+E++ +H+N++ L+G C +D ++ Y
Sbjct: 65 KEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYAS 124
Query: 486 NGSLDSHL 493
G+L +L
Sbjct: 125 KGNLREYL 132
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 2/85 (2%)
Query: 411 ANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVL-SCAQHRNVVMLI 468
+ L EG + V V L +G+ AVK + + EVE L C ++N++ LI
Sbjct: 18 SELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELI 77
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHL 493
F +D R LV+E + GS+ +H+
Sbjct: 78 EFFEDDTRFYLVFEKLQGGSILAHI 102
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 4 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 62
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 63 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 100
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 6 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 64
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 65 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 102
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEV 455
+Y + E+ + + L G +G V+ GV VAVK K + + + EF E V
Sbjct: 17 NYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAV 75
Query: 456 LSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ +H N+V L+G C + ++ E++ G+L +L
Sbjct: 76 MKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL 113
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L G FG V+ GV VAVK K + + + EF E V+ +H N+V L+G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 473 EDRRRLLVYEYICNGSLDSHL 493
+ ++ E++ G+L +L
Sbjct: 78 REPPFYIITEFMTYGNLLDYL 98
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L+ G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 84 PHVCRLLGICLTSTVQLIM 102
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 81 PHVCRLLGICLTSTVQLIM 99
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 80 PHVCRLLGICLTSTVQLIM 98
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 79 PHVCRLLGICLTSTVQLIM 97
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQA----VAVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L+ G FG+V++G+ +P+G+ VA+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 77 PHVCRLLGICLTSTVQLI 94
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 45/78 (57%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQA----VAVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L+ G FG+V++G+ +P+G+ VA+K+ + A+S + + E E V++ +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 84 PHVCRLLGICLTSTVQLI 101
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 77 PHVCRLLGICLTSTVQLIM 95
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 79 PHVCRLLGICLTSTVQLIM 97
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 78 PHVCRLLGICLTSTVQLIM 96
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 79 PHVCRLLGICLTSTVQLIM 97
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 81 PHVCRLLGICLTSTVQLIM 99
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 45/79 (56%), Gaps = 6/79 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 462 RNVVMLIGFCIEDRRRLLV 480
+V L+G C+ +L++
Sbjct: 78 PHVCRLLGICLTSTVQLIM 96
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 102 PHVCRLLGICLTSTVQLI 119
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 71 PHVCRLLGICLTSTVQLI 88
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 77 PHVCRLLGICLTSTVQLI 94
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 87 PHVCRLLGICLTSTVQLI 104
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 79 PHVCRLLGICLTSTVQLI 96
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 77 PHVCRLLGICLTSTVQLI 94
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 79 PHVCRLLGICLTSTVQLI 96
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 80 PHVCRLLGICLTSTVQLI 97
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 83 PHVCRLLGICLTSTVQLI 100
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 77 PHVCRLLGICLTSTVQLI 94
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 80 PHVCRLLGICLTSTVQLI 97
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 77 PHVCRLLGICLTSTVQLI 94
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 412 NFLAEGGFGSVHRG-VLPDG--QAVAVKQHKLASSQGDH-EFCSEVEVL-SCAQHRNVVM 466
+ + EG FG V + + DG A+K+ K +S+ DH +F E+EVL H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
L+G C L EY +G+L
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNL 113
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 80 PHVCRLLGICLTSTVQLI 97
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 84 PHVCRLLGICLTSTVQLI 101
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 74 PHVCRLLGICLTSTVQLI 91
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+K+ + A+S + + E E V++ +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 84 PHVCRLLGICLTSTVQLI 101
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 412 NFLAEGGFGSVHRG-VLPDG--QAVAVKQHKLASSQGDH-EFCSEVEVL-SCAQHRNVVM 466
+ + EG FG V + + DG A+K+ K +S+ DH +F E+EVL H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
L+G C L EY +G+L
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNL 103
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 5/104 (4%)
Query: 401 LELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLAS----SQGDHEFCSEVEVL 456
LE+ + + GGFG V+R G VAVK + SQ E ++
Sbjct: 2 LEIDFAELTLEEIIGIGGFGKVYRAFW-IGDEVAVKAARHDPDEDISQTIENVRQEAKLF 60
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNFLLP 500
+ +H N++ L G C+++ LV E+ G L+ L G + P
Sbjct: 61 AMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPP 104
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 5/83 (6%)
Query: 412 NFLAEGGFGSVHRG-VLPDG--QAVAVKQHKLASSQGDH-EFCSEVEVL-SCAQHRNVVM 466
+ + EG FG V + + DG A+K+ K +S+ DH +F E+EVL H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
L+G C L EY +G+L
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNL 110
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 40/93 (43%), Gaps = 1/93 (1%)
Query: 401 LELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQ 460
+EL + L G FG V G VAVK K S D EF E + +
Sbjct: 3 MELKREEITLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSED-EFFQEAQTMMKLS 61
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H +V G C ++ +V EYI NG L ++L
Sbjct: 62 HPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYL 94
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKL-ASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
+ +G FG V G G VAVK K A++Q F +E V++ +H N+V L+G +
Sbjct: 201 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 256
Query: 473 EDRRRL-LVYEYICNGSLDSHL 493
E++ L +V EY+ GSL +L
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYL 278
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLP----DGQAVAVKQHKLASSQGDH-EFCS 451
SY ++E G G FG V RG L VA+K K ++ EF S
Sbjct: 14 SYVKIEEVIGA---------GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 64
Query: 452 EVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGN 496
E ++ +H N++ L G +++ E++ NG+LDS L N
Sbjct: 65 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN 109
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L G +G V+ GV VAVK K + + + EF E V+ +H N+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 473 EDRRRLLVYEYICNGSLDSHL 493
+ ++ E++ G+L +L
Sbjct: 78 REPPFYIIIEFMTYGNLLDYL 98
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 4/81 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
+ +G FG V G G VAVK K + F +E V++ +H N+V L+G +E
Sbjct: 20 IGKGEFGDVMLGDY-RGNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 474 DRRRL-LVYEYICNGSLDSHL 493
++ L +V EY+ GSL +L
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYL 97
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 14/105 (13%)
Query: 397 SYAELELATGGFSQANFLAEGGFGSVHRGVLP----DGQAVAVKQHKLASSQGDH-EFCS 451
SY ++E G G FG V RG L VA+K K ++ EF S
Sbjct: 16 SYVKIEEVIGA---------GEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 66
Query: 452 EVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGN 496
E ++ +H N++ L G +++ E++ NG+LDS L N
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLN 111
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKL-ASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
+ +G FG V G G VAVK K A++Q F +E V++ +H N+V L+G +
Sbjct: 29 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 84
Query: 473 EDRRRL-LVYEYICNGSLDSHL 493
E++ L +V EY+ GSL +L
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYL 106
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKL-ASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
+ +G FG V G G VAVK K A++Q F +E V++ +H N+V L+G +
Sbjct: 14 IGKGEFGDVMLGDY-RGNKVAVKCIKNDATAQA---FLAEASVMTQLRHSNLVQLLGVIV 69
Query: 473 EDRRRL-LVYEYICNGSLDSHL 493
E++ L +V EY+ GSL +L
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYL 91
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L G +G V+ GV VAVK K + + + EF E V+ +H N+V L+G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 473 EDRRRLLVYEYICNGSLDSHL 493
+ ++ E++ G+L +L
Sbjct: 78 REPPFYIITEFMTYGNLLDYL 98
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 433 VAVKQHKLASSQGDH-EFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDS 491
VA+K K ++ +F SE ++ H N++ L G R ++V EY+ NGSLD+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 492 HL 493
L
Sbjct: 140 FL 141
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 433 VAVKQHKLASSQGDH-EFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDS 491
VA+K K ++ +F SE ++ H N++ L G R ++V EY+ NGSLD+
Sbjct: 80 VAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDT 139
Query: 492 HL 493
L
Sbjct: 140 FL 141
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVV 465
F Q L G + +V++G+ G VA+K+ KL S +G E+ ++ +H N+V
Sbjct: 7 FKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIV 66
Query: 466 MLIGFCIEDRRRLLVYEYICNG---SLDSHLYGN 496
L + + LV+E++ N +DS GN
Sbjct: 67 RLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGN 100
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRGVL--PDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G L P + + V L + D +F SE ++ H N++ L
Sbjct: 37 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 96
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHLYGN 496
G + + +++ EY+ NGSLD+ L N
Sbjct: 97 GVVTKCKPVMIITEYMENGSLDAFLRKN 124
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRG--VLPDGQA--VAVKQHKLASSQGDH-EFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G LP + VA+K K+ ++ +F E ++ H N++ L
Sbjct: 30 IGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHLE 89
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHLYGN 496
G + + ++V EY+ NGSLD+ L N
Sbjct: 90 GVVTKSKPVMIVTEYMENGSLDTFLKKN 117
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRGVL--PDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G L P + + V L + D +F SE ++ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHLYGN 496
G + + +++ EY+ NGSLD+ L N
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLRKN 103
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 5/85 (5%)
Query: 417 GGFGSVHRGVL--PDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRNVVMLIGFC 471
G FG V G L P + + V L + D +F SE ++ H N++ L G
Sbjct: 25 GEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVV 84
Query: 472 IEDRRRLLVYEYICNGSLDSHLYGN 496
+ + +++ EY+ NGSLD+ L N
Sbjct: 85 TKCKPVMIITEYMENGSLDAFLRKN 109
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 414 LAEGGFGSVHRGVL-PDG----QAVAVKQHKLASSQGDH--EFCSEVEVLSCAQHRNVVM 466
L EG FG V P+G + VAVK K S G+H + E+E+L H N+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVK 87
Query: 467 LIGFCIEDRRR--LLVYEYICNGSLDSHLYGN 496
G C ED L+ E++ +GSL +L N
Sbjct: 88 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 119
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V E + NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 12 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 71
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V E + NGSLDS L
Sbjct: 72 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 108
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVL 456
EL S + G FG V G LP + +VA+K K+ ++ +F E ++
Sbjct: 41 ELDATNISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIM 100
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N++ L G + + ++V E + NGSLDS L
Sbjct: 101 GQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFL 137
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L G +G V+ GV VAVK K + + + EF E V+ +H N+V L+G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 473 EDRRRLLVYEYICNGSLDSHL 493
+ +V EY+ G+L +L
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYL 119
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 414 LAEGGFGSVHRGVL-PDG----QAVAVKQHKLASSQGDH--EFCSEVEVLSCAQHRNVVM 466
L EG FG V P+G + VAVK K S G+H + E+E+L H N+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLK-PESGGNHIADLKKEIEILRNLYHENIVK 75
Query: 467 LIGFCIEDRRR--LLVYEYICNGSLDSHLYGN 496
G C ED L+ E++ +GSL +L N
Sbjct: 76 YKGICTEDGGNGIKLIMEFLPSGSLKEYLPKN 107
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRG--VLPDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G LP + + V L S + +F SE ++ H NV+ L
Sbjct: 41 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 100
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHLYGN 496
G + +++ E++ NGSLDS L N
Sbjct: 101 GVVTKSTPVMIITEFMENGSLDSFLRQN 128
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVL--PDGQA----VAVKQHKLASSQGD 446
P+W E L EG FG V + G+A VAVK K +S +
Sbjct: 16 PKW------EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE 69
Query: 447 -HEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ SE VL H +V+ L G C +D LL+ EY GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVL--PDGQA----VAVKQHKLASSQGD 446
P+W E L EG FG V + G+A VAVK K +S +
Sbjct: 16 PKW------EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE 69
Query: 447 -HEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ SE VL H +V+ L G C +D LL+ EY GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 45/108 (41%), Gaps = 13/108 (12%)
Query: 393 PRWFSYAELELATGGFSQANFLAEGGFGSVHRGVL--PDGQA----VAVKQHKLASSQGD 446
P+W E L EG FG V + G+A VAVK K +S +
Sbjct: 16 PKW------EFPRKNLVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSE 69
Query: 447 -HEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ SE VL H +V+ L G C +D LL+ EY GSL L
Sbjct: 70 LRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFL 117
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 36/91 (39%), Gaps = 5/91 (5%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G + VAVK K + F E ++ QH +V L
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 474 DRRRLLVYEYICNGSLDSHLY----GNFLLP 500
+ ++ EY+ GSL L G LLP
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLP 110
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 414 LAEGGFGSVHR----GVLP--DGQAVAVKQHKL-ASSQGDHEFCSEVEVLSCAQHRNVVM 466
+ EG FG V + G+LP VAVK K AS+ +F E +++ + N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 467 LIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C + L++EY+ G L+ L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFL 141
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVK-----QHKLASSQGDHEFCSEVEVLSCAQH 461
+ L G FG+V++G+ +P+G+ V + ++ + + EF E +++ H
Sbjct: 40 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 99
Query: 462 RNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLY 494
++V L+G C+ + LV + + +G L +++
Sbjct: 100 PHLVRLLGVCLSPTIQ-LVTQLMPHGCLLEYVH 131
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRG--VLPDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G LP + + V L S + +F SE ++ H NV+ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHLYGN 496
G + +++ E++ NGSLDS L N
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQN 102
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAV----AVKQHKLASS-QGDHEFCSEVEVLSCAQH 461
F + L G FG+V++G+ +P+G+ V A+ + + A+S + + E E V++ +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 462 RNVVMLIGFCIEDRRRLL 479
+V L+G C+ +L+
Sbjct: 111 PHVCRLLGICLTSTVQLI 128
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVL------PDGQAVAVKQHK-LASSQGDHEFCSE 452
E+ L+ F + L E FG V++G L QAVA+K K A EF E
Sbjct: 22 EISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 79
Query: 453 VEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ + QH NVV L+G +D+ +++ Y +G L L
Sbjct: 80 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 120
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/71 (23%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVK-----QHKLASSQGDHEFCSEVEVLSCAQH 461
+ L G FG+V++G+ +P+G+ V + ++ + + EF E +++ H
Sbjct: 17 LKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDH 76
Query: 462 RNVVMLIGFCI 472
++V L+G C+
Sbjct: 77 PHLVRLLGVCL 87
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSV----HRGVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G++ A VAVK K ++ + E SE++VLS H N+V
Sbjct: 47 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 106
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++ EY C G L + L
Sbjct: 107 NLLGACTIGGPTLVITEYCCYGDLLNFL 134
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSV----HRGVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G++ A VAVK K ++ + E SE++VLS H N+V
Sbjct: 31 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 90
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++ EY C G L + L
Sbjct: 91 NLLGACTIGGPTLVITEYCCYGDLLNFL 118
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSV----HRGVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G++ A VAVK K ++ + E SE++VLS H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++ EY C G L + L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVL------PDGQAVAVKQHK-LASSQGDHEFCSE 452
E+ L+ F + L E FG V++G L QAVA+K K A EF E
Sbjct: 5 EISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHE 62
Query: 453 VEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ + QH NVV L+G +D+ +++ Y +G L L
Sbjct: 63 AMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFL 103
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 6 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 65
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLYGN 496
+H N+++ +G+ + +L + C G SL HL+ +
Sbjct: 66 RHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHAS 101
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSV----HRGVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G++ A VAVK K ++ + E SE++VLS H N+V
Sbjct: 49 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 108
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++ EY C G L + L
Sbjct: 109 NLLGACTIGGPTLVITEYCCYGDLLNFL 136
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSV----HRGVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G++ A VAVK K ++ + E SE++VLS H N+V
Sbjct: 54 LGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIV 113
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++ EY C G L + L
Sbjct: 114 NLLGACTIGGPTLVITEYCCYGDLLNFL 141
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L +G FG V++ + G A K + S + ++ E+E+L+ H +V L+G
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 473 EDRRRLLVYEYICNGSLDS 491
D + ++ E+ G++D+
Sbjct: 79 HDGKLWIMIEFCPGGAVDA 97
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 414 LAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCI 472
L +G FG V++ + G A K + S + ++ E+E+L+ H +V L+G
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 473 EDRRRLLVYEYICNGSLDS 491
D + ++ E+ G++D+
Sbjct: 87 HDGKLWIMIEFCPGGAVDA 105
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 46/98 (46%), Gaps = 3/98 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLYGN 496
+H N+++ +G+ + +L + C G SL HL+ +
Sbjct: 78 RHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLHAS 113
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 406 GGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRN 463
G + L GGFG V R + D G+ VA+KQ + S + E +C E++++ H N
Sbjct: 14 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 73
Query: 464 VV 465
VV
Sbjct: 74 VV 75
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 406 GGFSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRN 463
G + L GGFG V R + D G+ VA+KQ + S + E +C E++++ H N
Sbjct: 15 GPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPN 74
Query: 464 VV 465
VV
Sbjct: 75 VV 76
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 29 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 88
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 89 RHVNILLFMGYSTKP--QLAIVTQWCEGSSLYHHLH 122
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 5/91 (5%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G + VAVK K + F E ++ QH +V L +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLK-PGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 474 DRRRLLVYEYICNGSLDSHLY----GNFLLP 500
+ ++ E++ GSL L G LLP
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLP 109
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 90 RHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLH 123
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 22 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 81
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 82 RHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLH 115
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 5/85 (5%)
Query: 414 LAEGGFGSVHRG--VLPDGQ--AVAVKQHKLASSQGDH-EFCSEVEVLSCAQHRNVVMLI 468
+ G FG V G LP + AVA+K K+ ++ +F E ++ H NVV L
Sbjct: 51 IGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVVHLE 110
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHL 493
G + ++V E++ NG+LD+ L
Sbjct: 111 GVVTRGKPVMIVIEFMENGALDAFL 135
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 36.6 bits (83), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 64 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 123
Query: 491 SHL 493
+ L
Sbjct: 124 NFL 126
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 30 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 89
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 90 RHVNILLFMGYST--KPQLAIVTQWCEGSSLYHHLH 123
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 67 RHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLH 100
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 36.6 bits (83), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 4 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 63
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 64 RHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLH 97
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 7 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 66
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 67 RHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLH 100
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 36.6 bits (83), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 62 RHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLH 95
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ + +L + C G SL HL+
Sbjct: 62 RHVNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLH 95
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 45/98 (45%), Gaps = 3/98 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 18 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 77
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLYGN 496
+H N+++ +G+ +L + C G SL HL+ +
Sbjct: 78 RHVNILLFMGYSTAP--QLAIVTQWCEGSSLYHHLHAS 113
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 391 KPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC 450
KP + + E E+ L G FG V G VAVK K S D F
Sbjct: 4 KPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FL 62
Query: 451 SEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E ++ QH+ +V L ++ ++ EY+ NGSL L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL 104
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 491 SHL 493
+ L
Sbjct: 139 NFL 141
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 414 LAEGGFGSVHR----GVLPDGQA--VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVV 465
L G FG V G+ G + VAVK K + + E SE+++++ H N+V
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHL 493
L+G C L++EY C G L ++L
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYL 140
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 391 KPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC 450
KP + + E E+ L G FG V G VAVK K S D F
Sbjct: 6 KPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFL 64
Query: 451 SEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E ++ QH+ +V L ++ ++ EY+ NGSL L
Sbjct: 65 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL 106
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 491 SHL 493
+ L
Sbjct: 139 NFL 141
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 491 SHL 493
+ L
Sbjct: 139 NFL 141
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 71 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 130
Query: 491 SHL 493
+ L
Sbjct: 131 NFL 133
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 36.2 bits (82), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 41/82 (50%), Gaps = 3/82 (3%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
+ G FG+V++G AV + + + + F +EV VL +H N+++ +G+ +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 474 DRRRLLVYEYICNG-SLDSHLY 494
D L + C G SL HL+
Sbjct: 104 D--NLAIVTQWCEGSSLYKHLH 123
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 36.2 bits (82), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 391 KPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC 450
KP + + E E+ L G FG V G VAVK K S D F
Sbjct: 8 KPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFL 66
Query: 451 SEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E ++ QH+ +V L ++ ++ EY+ NGSL L
Sbjct: 67 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL 108
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 433 VAVKQHKLASSQGDHE-FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLD 490
VAVK K + + E SE++++S QH N+V L+G C L++ EY C G L
Sbjct: 79 VAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLL 138
Query: 491 SHL 493
+ L
Sbjct: 139 NFL 141
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 391 KPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC 450
KP + + E E+ L G FG V G VAVK K S D F
Sbjct: 3 KPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFL 61
Query: 451 SEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E ++ QH+ +V L ++ ++ EY+ NGSL L
Sbjct: 62 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL 103
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 391 KPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC 450
KP + + E E+ L G FG V G VAVK K S D F
Sbjct: 4 KPQKPWWEDEWEVPRETLKLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFL 62
Query: 451 SEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E ++ QH+ +V L ++ ++ EY+ NGSL L
Sbjct: 63 AEANLMKQLQHQRLVRLYAVVTQEPIYIIT-EYMENGSLVDFL 104
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 35.8 bits (81), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 88
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 89 EPIYIIT-EYMENGSLVDFL 107
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 80 EPIYIIT-EYMENGSLVDFL 98
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 81
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 82 EPIYIIT-EYMENGSLVDFL 100
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 3/96 (3%)
Query: 400 ELELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCA 459
+ E+ G + + G FG+V++G AV + + Q F +EV VL
Sbjct: 2 DWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKT 61
Query: 460 QHRNVVMLIGFCIEDRRRLLVYEYICNG-SLDSHLY 494
+H N+++ +G+ +L + C G SL HL+
Sbjct: 62 RHVNILLFMGYSTAP--QLAIVTQWCEGSSLYHHLH 95
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 80 EPIYIIT-EYMENGSLVDFL 98
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 80
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 81 EPIYIIT-EYMENGSLVDFL 99
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
+ G FG V + + VA+KQ + S F E+ LS H N+V L G C+
Sbjct: 17 VGRGAFGVVCKAKW-RAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGACLN 73
Query: 474 DRRRLLVYEYICNGSLDSHLYGNFLLPH 501
LV EY GSL + L+G LP+
Sbjct: 74 P--VCLVMEYAEGGSLYNVLHGAEPLPY 99
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 399 AELELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVE 454
A+ + A F L +G FG+V+ + + + A+K + +L + +H+ EVE
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 455 VLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ S +H N++ L G+ + R L+ EY G++ L
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYREL 99
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 35.4 bits (80), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 79
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 80 EPIYIIT-EYMENGSLVDFL 98
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 41/88 (46%), Gaps = 5/88 (5%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
+ G FG V + + VA+KQ + S F E+ LS H N+V L G C+
Sbjct: 16 VGRGAFGVVCKAKW-RAKDVAIKQ--IESESERKAFIVELRQLSRVNHPNIVKLYGACLN 72
Query: 474 DRRRLLVYEYICNGSLDSHLYGNFLLPH 501
LV EY GSL + L+G LP+
Sbjct: 73 P--VCLVMEYAEGGSLYNVLHGAEPLPY 98
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 35.4 bits (80), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 75
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 76 EPIYIIT-EYMENGSLVDFL 94
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 408 FSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEF----CSEVEVLSCAQHR 462
+ + EG +G V + D G+ VA+K K S D E+++L +H
Sbjct: 27 YENLGLVGEGSYGMVMKCRNKDTGRIVAIK--KFLESDDDKMVKKIAMREIKLLKQLRHE 84
Query: 463 NVVMLIGFCIEDRRRLLVYEYICNGSLDS 491
N+V L+ C + +R LV+E++ + LD
Sbjct: 85 NLVNLLEVCKKKKRWYLVFEFVDHTILDD 113
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 13/81 (16%)
Query: 414 LAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHE-------FCSEVEVLSCAQHRNVV 465
L EG +G V++ + + VA+K+ +L +HE EV +L QHRN++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRL-----EHEEEGVPGTAIREVSLLKELQHRNII 96
Query: 466 MLIGFCIEDRRRLLVYEYICN 486
L + R L++EY N
Sbjct: 97 ELKSVIHHNHRLHLIFEYAEN 117
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 42/91 (46%), Gaps = 8/91 (8%)
Query: 414 LAEGGFGSVHRGVLPD----GQA----VAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
L +G F + +GV + GQ V +K A F ++S H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHLYGN 496
+ G C+ +LV E++ GSLD++L N
Sbjct: 76 LNYGVCVCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 43/91 (47%), Gaps = 17/91 (18%)
Query: 413 FLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEV--LSCAQHRNVVMLIGF 470
+ G +G+V++G L D + VAVK A+ Q F +E + + +H N+ F
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVFSFANRQN---FINEKNIYRVPLMEHDNIAR---F 72
Query: 471 CIEDRR--------RLLVYEYICNGSLDSHL 493
+ D R LLV EY NGSL +L
Sbjct: 73 IVGDERVTADGRMEYLLVMEYYPNGSLXKYL 103
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 414 LAEGGFGSVHRGVL-PDGQAVAVKQ-HKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFC 471
+ G FG V G L D VAVK + +F E +L H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 472 IEDRRRLLVYEYICNGSLDSHL 493
+ + +V E + G + L
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL 203
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 2/80 (2%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIE 473
L G FG V G VAVK K S D F +E ++ QH+ +V L +
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPD-AFLAEANLMKQLQHQRLVRLYAVVTQ 74
Query: 474 DRRRLLVYEYICNGSLDSHL 493
+ ++ EY+ NGSL L
Sbjct: 75 EPIYIIT-EYMENGSLVDFL 93
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 35/82 (42%), Gaps = 2/82 (2%)
Query: 414 LAEGGFGSVHRGVL-PDGQAVAVKQ-HKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFC 471
+ G FG V G L D VAVK + +F E +L H N+V LIG C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 472 IEDRRRLLVYEYICNGSLDSHL 493
+ + +V E + G + L
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFL 203
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGD--HEFCSEVEVLSCAQHRNVVMLIGFC 471
+ EG +G V++ G+ A+K+ +L E+ +L +H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 472 IEDRRRLLVYEY----------ICNGSLDSHLYGNFLL 499
+R +LV+E+ +C G L+S +FLL
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGD--HEFCSEVEVLSCAQHRNVVMLIGFC 471
+ EG +G V++ G+ A+K+ +L E+ +L +H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 472 IEDRRRLLVYEY----------ICNGSLDSHLYGNFLL 499
+R +LV+E+ +C G L+S +FLL
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGD--HEFCSEVEVLSCAQHRNVVMLIGFC 471
+ EG +G V++ G+ A+K+ +L E+ +L +H N+V L
Sbjct: 10 IGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI 69
Query: 472 IEDRRRLLVYEY----------ICNGSLDSHLYGNFLL 499
+R +LV+E+ +C G L+S +FLL
Sbjct: 70 HTKKRLVLVFEHLDQDLKKLLDVCEGGLESVTAKSFLL 107
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQ--HKLASSQGDHEFCSEVE---VLSCAQH 461
+ L G FG+VH+GV +P+G+++ + + G F + + + H
Sbjct: 33 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 92
Query: 462 RNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
++V L+G C + LV +Y+ GSL H+
Sbjct: 93 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV 123
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 8/91 (8%)
Query: 414 LAEGGFGSVHRGVLPD----GQA----VAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVV 465
L +G F + +GV + GQ V +K A F ++S H+++V
Sbjct: 16 LGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLV 75
Query: 466 MLIGFCIEDRRRLLVYEYICNGSLDSHLYGN 496
+ G C +LV E++ GSLD++L N
Sbjct: 76 LNYGVCFCGDENILVQEFVKFGSLDTYLKKN 106
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G + L
Sbjct: 81 YFHDATRVYLILEYAPRGEVYKEL 104
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 45/96 (46%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G + L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKEL 104
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 30 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 89
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 90 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 125
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 399 AELELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVE 454
A+ + A F L +G FG+V+ + + A+K + +L + +H+ EVE
Sbjct: 1 AKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 455 VLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+ S +H N++ L G+ + R L+ EY G++ L
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQ--HKLASSQGDHEFCSEVE---VLSCAQH 461
+ L G FG+VH+GV +P+G+++ + + G F + + + H
Sbjct: 15 LRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDH 74
Query: 462 RNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
++V L+G C + LV +Y+ GSL H+
Sbjct: 75 AHIVRLLGLCPGSSLQ-LVTQYLPLGSLLDHV 105
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 50/107 (46%), Gaps = 9/107 (8%)
Query: 396 FSYAELELATGGFSQANFLAEGGFGSVHRGVL------PDGQAVAVKQHKLASSQGDHE- 448
+ ++ E A L G FG V + P + VAVK K ++ +++
Sbjct: 17 YDASKWEFARERLKLGKSLGRGAFGKVVQASAFGIKKSPTCRTVAVKMLKEGATASEYKA 76
Query: 449 FCSEVEVLS-CAQHRNVVMLIGFCIEDRRRLLVY-EYICNGSLDSHL 493
+E+++L+ H NVV L+G C + L+V EY G+L ++L
Sbjct: 77 LMTELKILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYL 123
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/101 (24%), Positives = 46/101 (45%), Gaps = 9/101 (8%)
Query: 402 ELATGGFSQANF-----LAEGGFGSVHRGVLPDGQ-AVAVK---QHKLASSQGDHEFCSE 452
++ T F+ +F L +G FG+V+ VA+K + ++ +H+ E
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 453 VEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+E+ + H N++ L + + RR L+ EY G L L
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKEL 114
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 77 YFHDATRVYLILEYAPLGTVYREL 100
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 93 YFHDATRVYLILEYAPLGTVYREL 116
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 5 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 64
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 65 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 100
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 6 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 65
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 66 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 101
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 78 YFHDATRVYLILEYAPLGTVYREL 101
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 3 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 62
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 63 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 98
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL 104
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 81 YFHDATRVYLILEYAPLGTVYREL 104
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 9 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 68
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 69 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 104
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 7 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 66
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 67 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 102
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 4 QWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQS 63
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 64 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 99
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 79 YFHDATRVYLILEYAPLGTVYREL 102
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 33.1 bits (74), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHL 493
G E+ ++ E G L S L
Sbjct: 78 GVITEN-PVWIIMELCTLGELRSFL 101
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 469 GFCIED 474
G E+
Sbjct: 78 GVITEN 83
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 469 GFCIED 474
G E+
Sbjct: 458 GVITEN 463
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 469 GFCIED 474
G E+
Sbjct: 458 GVITEN 463
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 6/85 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 469 GFCIEDRRRLLVYEYICNGSLDSHL 493
G I + ++ E G L S L
Sbjct: 78 G-VITENPVWIIMELCTLGELRSFL 101
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 1/82 (1%)
Query: 409 SQANFLAEGGFGSVHR-GVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVML 467
S+ L G FG VH+ G +A K K + E +E+ V++ H N++ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 468 IGFCIEDRRRLLVYEYICNGSL 489
+LV EY+ G L
Sbjct: 152 YDAFESKNDIVLVMEYVDGGEL 173
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L + +H+ EVE+ S +H N++ L G
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL 493
+ + R L+ EY G++ L
Sbjct: 80 YFHDATRVYLILEYAPLGTVYREL 103
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ A F L +G FG+V+ + + A+K + +L + +H+ EVE+ S
Sbjct: 1 QWALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQS 60
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
+H N++ L G+ + R L+ EY G++ L
Sbjct: 61 HLRHPNILRLYGYFHDATRVYLILEYAPLGTVYREL 96
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 469 GFCIED 474
G E+
Sbjct: 106 GVITEN 111
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKL-ASSQG-DHEFCSEVEVLSCAQHRNVV 465
+ + + EG +G V++ G+ VA+K+ +L A +G E+ +L H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 466 MLIGFCIEDRRRLLVYEYI 484
LI +R LV+E++
Sbjct: 83 SLIDVIHSERCLTLVFEFM 101
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 469 GFCIED 474
G E+
Sbjct: 78 GVITEN 83
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 32.3 bits (72), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 469 GFCIED 474
G E+
Sbjct: 75 GVITEN 80
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 469 GFCIED 474
G E+
Sbjct: 83 GVITEN 88
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 32.3 bits (72), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 469 GFCIED 474
G E+
Sbjct: 80 GVITEN 85
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 32.3 bits (72), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKL-ASSQG-DHEFCSEVEVLSCAQHRNVV 465
+ + + EG +G V++ G+ VA+K+ +L A +G E+ +L H N+V
Sbjct: 23 YQKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIV 82
Query: 466 MLIGFCIEDRRRLLVYEYI 484
LI +R LV+E++
Sbjct: 83 SLIDVIHSERCLTLVFEFM 101
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 32.3 bits (72), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 5/66 (7%)
Query: 414 LAEGGFGSVHRGVL--PD--GQAVAVKQHKLASSQGDHE-FCSEVEVLSCAQHRNVVMLI 468
+ EG FG VH+G+ P+ AVA+K K +S E F E + H ++V LI
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 469 GFCIED 474
G E+
Sbjct: 81 GVITEN 86
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 414 LAEGGFGSVHRGVLPDG-QAVAVKQHKL------ASSQGDHEFCSEVEVLSCAQHRNVVM 466
+ EG +G+V + + + VA+K+ +L S E C +L +H+N+V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC----LLKELKHKNIVR 65
Query: 467 LIGFCIEDRRRLLVYEYI----------CNGSLDSHLYGNFLL 499
L D++ LV+E+ CNG LD + +FL
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF 108
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVM 466
+++ + +G G+V+ + + GQ VA++Q L +E+ V+ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
+ + +V EY+ GSL
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSL 104
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVM 466
+++ + +G G+V+ + + GQ VA++Q L +E+ V+ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
+ + +V EY+ GSL
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSL 104
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 32.3 bits (72), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVM 466
+++ + +G G+V+ + + GQ VA++Q L +E+ V+ ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
+ + +V EY+ GSL
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSL 105
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVM 466
+++ + +G G+V+ + + GQ VA++Q L +E+ V+ ++ N+V
Sbjct: 23 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 82
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
+ + +V EY+ GSL
Sbjct: 83 YLDSYLVGDELWVVMEYLAGGSL 105
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 46/103 (44%), Gaps = 21/103 (20%)
Query: 414 LAEGGFGSVHRGVLPDG-QAVAVKQHKL------ASSQGDHEFCSEVEVLSCAQHRNVVM 466
+ EG +G+V + + + VA+K+ +L S E C +L +H+N+V
Sbjct: 10 IGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREIC----LLKELKHKNIVR 65
Query: 467 LIGFCIEDRRRLLVYEYI----------CNGSLDSHLYGNFLL 499
L D++ LV+E+ CNG LD + +FL
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDPEIVKSFLF 108
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVM 466
+++ + +G G+V+ + + GQ VA++Q L +E+ V+ ++ N+V
Sbjct: 22 YTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVN 81
Query: 467 LIGFCIEDRRRLLVYEYICNGSL 489
+ + +V EY+ GSL
Sbjct: 82 YLDSYLVGDELWVVMEYLAGGSL 104
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDL 137
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 32.0 bits (71), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDL 178
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.0 bits (71), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 469 GFCIEDR-RRLLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDL 138
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDL 118
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 405 TGGFSQANFLAEGGFGSVHRGVLP-DGQAVAVKQHK--LASSQGDHEFCSEVEVLSC-AQ 460
T F + + G FGSV + V DG A+K+ K LA S + EV + Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNF 497
H +VV ED L+ EY GSL + N+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY 104
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 32.0 bits (71), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL 119
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL 119
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDL 124
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDL 120
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDL 111
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.0 bits (71), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 405 TGGFSQANFLAEGGFGSVHRGVLP-DGQAVAVKQHK--LASSQGDHEFCSEVEVLSC-AQ 460
T F + + G FGSV + V DG A+K+ K LA S + EV + Q
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNF 497
H +VV ED L+ EY GSL + N+
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY 102
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.0 bits (71), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDL 120
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDL 117
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDL 114
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDL 117
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 43/97 (44%), Gaps = 7/97 (7%)
Query: 402 ELATGGFSQANFLAEGGFGSVH--RGVLPDGQAVAVK---QHKLASSQGDHEFCSEVEVL 456
+L G + + +G F V R +L G+ VAVK + +L SS F EV ++
Sbjct: 3 DLHIGNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIM 60
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N+V L ++ LV EY G + +L
Sbjct: 61 KVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 97
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDL 116
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL 119
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 405 TGGFSQANFLAEGGFGSVHRGVLP-DGQAVAVKQHK--LASSQGDHEFCSEVEVLSC-AQ 460
T F + + G FGSV + V DG A+K+ K LA S + EV + Q
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNF 497
H +VV ED L+ EY GSL + N+
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY 104
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDL 118
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 31.6 bits (70), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 414 LAEGGFGSVHRGVL--PDGQAV--AVKQHKLASSQGD-HEFCSEVEVLSCAQHRNVVMLI 468
+ G FG V+ G L DG+ + AVK + G+ +F +E ++ H NV+ L+
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 469 GFCIEDRRR-LLVYEYICNGSL 489
G C+ L+V Y+ +G L
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDL 119
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 31.6 bits (70), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 42/97 (43%), Gaps = 4/97 (4%)
Query: 405 TGGFSQANFLAEGGFGSVHRGVLP-DGQAVAVKQHK--LASSQGDHEFCSEVEVLSC-AQ 460
T F + + G FGSV + V DG A+K+ K LA S + EV + Q
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHLYGNF 497
H +VV ED L+ EY GSL + N+
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENY 106
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 408 FSQANFLAEGGFGSVHRGV--LPDGQAVAVKQHKLASSQGDHEFCS---EVEVLSCAQHR 462
+ + + L EG + +V++G L D VA+K+ +L +G C+ EV +L +H
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDN-LVALKEIRLEHEEGAP--CTAIREVSLLKDLKHA 60
Query: 463 NVVMLIGFCIEDRRRLLVYEYI 484
N+V L ++ LV+EY+
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYL 82
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 40/93 (43%), Gaps = 9/93 (9%)
Query: 406 GGFSQANFLAE-----GGFGSVHRGV-LPDGQAVAVKQ---HKLASSQGDHEFCSEVEVL 456
G + ANF E G F V+R L DG VA+K+ L ++ + E+++L
Sbjct: 27 GYNTLANFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 457 SCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
H NV+ IED +V E G L
Sbjct: 87 KQLNHPNVIKYYASFIEDNELNIVLELADAGDL 119
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 176 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 235
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 488 SLDSHL 493
+L ++L
Sbjct: 109 NLSTYL 114
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/102 (22%), Positives = 46/102 (45%), Gaps = 6/102 (5%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLS 457
+ F L +G FG+V+ + + A+K + +L +H+ E+E+ S
Sbjct: 10 KFTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQS 69
Query: 458 CAQHRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL--YGNF 497
+H N++ + + + +R L+ E+ G L L +G F
Sbjct: 70 HLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF 111
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 488 SLDSHL 493
+L ++L
Sbjct: 120 NLSTYL 125
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 488 SLDSHL 493
+L ++L
Sbjct: 109 NLSTYL 114
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L +H+ E+E+ S +H N++ +
Sbjct: 23 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 82
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL--YGNF 497
+ + +R L+ E+ G L L +G F
Sbjct: 83 YFHDRKRIYLMLEFAPRGELYKELQKHGRF 112
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 414 LAEGGFGSVHRGVLPDGQAV-AVK---QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIG 469
L +G FG+V+ + + A+K + +L +H+ E+E+ S +H N++ +
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYN 81
Query: 470 FCIEDRRRLLVYEYICNGSLDSHL--YGNF 497
+ + +R L+ E+ G L L +G F
Sbjct: 82 YFHDRKRIYLMLEFAPRGELYKELQKHGRF 111
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFG 108
Query: 488 SLDSHL 493
+L ++L
Sbjct: 109 NLSTYL 114
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 99 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 95 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 154
Query: 488 SLDSHL 493
+L ++L
Sbjct: 155 NLSTYL 160
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 7/81 (8%)
Query: 408 FSQANFLAEGGFGSVHRGVLPD-GQAVAVKQHKLASSQGDHEF----CSEVEVLSCAQHR 462
+ + + EG +G V + D GQ VA+K K S+ D E+ +L +H
Sbjct: 5 YEKIGKIGEGSYGVVFKCRNRDTGQIVAIK--KFLESEDDPVIKKIALREIRMLKQLKHP 62
Query: 463 NVVMLIGFCIEDRRRLLVYEY 483
N+V L+ RR LV+EY
Sbjct: 63 NLVNLLEVFRRKRRLHLVFEY 83
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 59 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 118
Query: 488 SLDSHL 493
+L ++L
Sbjct: 119 NLSTYL 124
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 49 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 108
Query: 488 SLDSHL 493
+L ++L
Sbjct: 109 NLSTYL 114
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 488 SLDSHL 493
+L ++L
Sbjct: 120 NLSTYL 125
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 51 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 110
Query: 488 SLDSHL 493
+L ++L
Sbjct: 111 NLSTYL 116
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 54 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 113
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 56 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 115
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 53 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 112
Query: 488 SLDSHL 493
+L ++L
Sbjct: 113 NLSTYL 118
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 58 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 117
Query: 488 SLDSHL 493
+L ++L
Sbjct: 118 NLSTYL 123
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 431 QAVAVKQHKLASSQGDHE-FCSEVEVL-SCAQHRNVVMLIGFCIEDRRRLLVYEYICN-G 487
+ VAVK K ++ +H SE+++L H NVV L+G C + L+V C G
Sbjct: 60 RTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFG 119
Query: 488 SLDSHL 493
+L ++L
Sbjct: 120 NLSTYL 125
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 30.4 bits (67), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 49 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 108
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 29/60 (48%)
Query: 430 GQAVAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDRRRLLVYEYICNGSL 489
G+ VAVK+ L Q +EV ++ QH NVV + + +V E++ G+L
Sbjct: 45 GKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 406 GGFSQANFLAEGGFGSVH--RGVLPDGQAVAVK---QHKLASSQGDHEFCSEVEVLSCAQ 460
G + + +G F V R +L G+ VAVK + +L SS F EV ++
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN 71
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N+V L ++ LV EY G + +L
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 406 GGFSQANFLAEGGFGSVH--RGVLPDGQAVAVK---QHKLASSQGDHEFCSEVEVLSCAQ 460
G + + +G F V R +L G+ VAVK + +L SS F EV ++
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN 71
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N+V L ++ LV EY G + +L
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 41/93 (44%), Gaps = 7/93 (7%)
Query: 406 GGFSQANFLAEGGFGSVH--RGVLPDGQAVAVK---QHKLASSQGDHEFCSEVEVLSCAQ 460
G + + +G F V R +L G+ VAVK + +L SS F EV ++
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILT-GKEVAVKIIDKTQLNSSSLQKLF-REVRIMKVLN 71
Query: 461 HRNVVMLIGFCIEDRRRLLVYEYICNGSLDSHL 493
H N+V L ++ LV EY G + +L
Sbjct: 72 HPNIVKLFEVIETEKTLYLVMEYASGGEVFDYL 104
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 10/74 (13%)
Query: 402 ELATGGFSQANFLAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFCSEVEVLSCAQH 461
+L GGFS + L EG L DG A+K+ Q E E ++ H
Sbjct: 36 KLGEGGFSYVD-LVEG---------LHDGHFYALKRILCHEQQDREEAQREADMHRLFNH 85
Query: 462 RNVVMLIGFCIEDR 475
N++ L+ +C+ +R
Sbjct: 86 PNILRLVAYCLRER 99
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 29.6 bits (65), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRN 463
FS + G FG+V+ + + + VA+K+ + Q + + EV L +H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 464 VVMLIGFCIEDRRRLLVYEYICNGSLD 490
+ G + + LV EY + D
Sbjct: 116 TIQYRGCYLREHTAWLVMEYCLGSASD 142
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 410 QANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVL-SCAQHRNVVML 467
Q + L EG V + L Q AVK + EVE+L C HRNV+ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHLY 494
I F E+ R LV+E + GS+ SH++
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH 103
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 410 QANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGDHEFCSEVEVL-SCAQHRNVVML 467
Q + L EG V + L Q AVK + EVE+L C HRNV+ L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 468 IGFCIEDRRRLLVYEYICNGSLDSHLY 494
I F E+ R LV+E + GS+ SH++
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH 103
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 29.6 bits (65), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 37/87 (42%), Gaps = 4/87 (4%)
Query: 408 FSQANFLAEGGFGSVHRGV-LPDGQAVAVKQHKLASSQGD---HEFCSEVEVLSCAQHRN 463
FS + G FG+V+ + + + VA+K+ + Q + + EV L +H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 464 VVMLIGFCIEDRRRLLVYEYICNGSLD 490
+ G + + LV EY + D
Sbjct: 77 TIQYRGCYLREHTAWLVMEYCLGSASD 103
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 414 LAEGGFGSVHRGV-LPDGQAVAVK--QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGF 470
L +G F V R + +P GQ A K K S++ + E + +H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 471 CIEDRRRLLVYEYICNGSL 489
E+ LV++ + G L
Sbjct: 72 ISEEGFHYLVFDLVTGGEL 90
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 44/101 (43%), Gaps = 12/101 (11%)
Query: 408 FSQANFLAEGGFGSVHRGVLP--DGQ--AVAVKQHK--LASSQGDHEFCSEVEVLSCAQH 461
F+ L +G FGSV L DG VAVK K + +S EF E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 462 RNVVMLIGFCIEDRRR------LLVYEYICNGSLDSHLYGN 496
+V L+G + R + +++ ++ +G L + L +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLAS 125
>pdb|3GDE|A Chain A, The Closed Conformation Of Atp-Dependent Dna Ligase From
Archaeoglobus Fulgidus
Length = 558
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 12/71 (16%)
Query: 421 SVHRGVLPDGQAVAVK-------QHKLASSQGDHEFCSEVEVLSCAQH-RNVVMLIGFCI 472
SV GV+ DG+ +AVK QH L + H+ VE + H +++ G CI
Sbjct: 291 SVKPGVILDGEVIAVKEGKPMPFQHVLRRFRRKHDVAKMVEKIPLEAHFFDILYHDGECI 350
Query: 473 E----DRRRLL 479
+ +RR+LL
Sbjct: 351 DLPLRERRKLL 361
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 29.3 bits (64), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQ-AVAVKQHKLASSQGDHEFCS-EVEVLSCAQHRNVV 465
F++ + +G FG V +G+ Q VA+K L ++ + E E+ VLS V
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 83
Query: 466 MLIGFCIEDRRRLLVYEYICNGS 488
G ++D + ++ EY+ GS
Sbjct: 84 KYYGSYLKDTKLWIIMEYLGGGS 106
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQ-AVAVKQHKLASSQGDHEFCS-EVEVLSCAQHRNVV 465
F++ + +G FG V +G+ Q VA+K L ++ + E E+ VLS V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 466 MLIGFCIEDRRRLLVYEYICNGS 488
G ++D + ++ EY+ GS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS 91
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQ-AVAVKQHKLASSQGDHEFCS-EVEVLSCAQHRNVV 465
F++ + +G FG V +G+ Q VA+K L ++ + E E+ VLS V
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 68
Query: 466 MLIGFCIEDRRRLLVYEYICNGS 488
G ++D + ++ EY+ GS
Sbjct: 69 KYYGSYLKDTKLWIIMEYLGGGS 91
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 408 FSQANFLAEGGFGSVHRGVLPDGQ-AVAVKQHKLASSQGDHEFCS-EVEVLSCAQHRNVV 465
F++ + +G FG V +G+ Q VA+K L ++ + E E+ VLS V
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVT 88
Query: 466 MLIGFCIEDRRRLLVYEYICNGS 488
G ++D + ++ EY+ GS
Sbjct: 89 KYYGSYLKDTKLWIIMEYLGGGS 111
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 28.9 bits (63), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 3/79 (3%)
Query: 414 LAEGGFGSVHRGV-LPDGQAVAVK--QHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGF 470
L +G F V R + +P GQ A K K S++ + E + +H N+V L
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 471 CIEDRRRLLVYEYICNGSL 489
E+ LV++ + G L
Sbjct: 72 ISEEGFHYLVFDLVTGGEL 90
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 4/56 (7%)
Query: 414 LAEGGFGSVHRGVLPDGQAVAVKQHKLASSQGDHEFC--SEVEVLSCAQHRNVVML 467
L G FG VHR V + + K +G + E+ +L+ A+HRN++ L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMA--KFVKVKGTDQVLVKKEISILNIARHRNILHL 66
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,872,958
Number of Sequences: 62578
Number of extensions: 534592
Number of successful extensions: 1586
Number of sequences better than 100.0: 356
Number of HSP's better than 100.0 without gapping: 195
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 1343
Number of HSP's gapped (non-prelim): 364
length of query: 501
length of database: 14,973,337
effective HSP length: 103
effective length of query: 398
effective length of database: 8,527,803
effective search space: 3394065594
effective search space used: 3394065594
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)