Your job contains 1 sequence.
>010790
MSNTTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHH
FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYA
FVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK
VSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNG
GGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREV
KANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPL
VILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEM
RDHIFELLGSNFFLKWKERHQVHYTFVKGNLKLQMPPPYSSVIQESEKGSWHVPILVKGN
SSQTWLCITRPNVCESRDEAQ
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010790
(501 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2059824 - symbol:PRORP2 "proteinaceous RNase P... 1572 1.9e-161 1
TAIR|locus:2141662 - symbol:PRORP3 "AT4G21900" species:37... 1518 1.0e-155 1
TAIR|locus:2045432 - symbol:PRORP1 "proteinaceous RNase P... 1093 1.1e-110 1
TAIR|locus:2175178 - symbol:AT5G60430 species:3702 "Arabi... 334 3.0e-30 1
RGD|1305089 - symbol:RGD1305089 "similar to 1110008L16Rik... 188 1.9e-11 1
MGI|MGI:1913382 - symbol:1110008L16Rik "RIKEN cDNA 111000... 180 3.7e-10 2
UNIPROTKB|O15091 - symbol:KIAA0391 "Mitochondrial ribonuc... 170 1.8e-09 1
TAIR|locus:2020808 - symbol:AT1G03560 species:3702 "Arabi... 126 0.00014 1
TAIR|locus:2086032 - symbol:PPR40 "pentatricopeptide (PPR... 121 0.00050 1
>TAIR|locus:2059824 [details] [associations]
symbol:PRORP2 "proteinaceous RNase P 2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion" evidence=ISM]
[GO:0016020 "membrane" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0001682 "tRNA 5'-leader removal" evidence=IDA]
[GO:0004526 "ribonuclease P activity" evidence=IDA] [GO:0006397
"mRNA processing" evidence=IMP] [GO:0043144 "snoRNA processing"
evidence=IMP] GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0006397 EMBL:AC005825 PROSITE:PS51375 GO:GO:0043144
InterPro:IPR021869 Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526
GO:GO:0001682 HOGENOM:HOG000006117 EMBL:AK175948 IPI:IPI00545620
IPI:IPI00657270 PIR:E84542 RefSeq:NP_179256.3 UniGene:At.29161
ProteinModelPortal:Q680B9 PaxDb:Q680B9 PRIDE:Q680B9
EnsemblPlants:AT2G16650.1 GeneID:816166 KEGG:ath:AT2G16650
TAIR:At2g16650 InParanoid:Q680B9 OMA:EIQESEM PhylomeDB:Q680B9
ProtClustDB:CLSN2681692 Genevestigator:Q680B9 Uniprot:Q680B9
Length = 528
Score = 1572 (558.4 bits), Expect = 1.9e-161, P = 1.9e-161
Identities = 301/491 (61%), Positives = 372/491 (75%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
ETN L NL SC+KSKDL+ A++LY++A S +RLS HF LLYLCS S TD S + A
Sbjct: 30 ETNLLFNLNSCSKSKDLSAALALYDAAITSSEVRLSQQHFQTLLYLCSASITDISLQYLA 89
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF +FD+M+S+ + PNEASVTSVARLAA+K +GDYAF ++K + V +PRLRTY
Sbjct: 90 IDRGFEIFDRMVSSGISPNEASVTSVARLAAAKGNGDYAFKVVKEFVSVGGVSIPRLRTY 149
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFCE LEAEK YEVEEHM G++LE+ EI+ALLKVSA TGR KVY+YL KLR
Sbjct: 150 APALLCFCEKLEAEKGYEVEEHMEAAGIALEEAEISALLKVSAATGRENKVYRYLHKLRE 209
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNXXXXXXXXXXXXXKWV 255
V CV+EET KIIE+WF G+K NG+ D+G+++ AVL N KW
Sbjct: 210 YVGCVSEETLKIIEEWFCGEKAGEVGDNGIGSDVGMLREAVLNNGGGWHGHGWVGEGKWT 269
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-------FSEFQ 308
VK+G+V +G+C SC +QLACVD ++ ET++F S+ ALAM+R+ K N FSEFQ
Sbjct: 270 VKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDSLVALAMDRKTKMNSCETNVVFSEFQ 329
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGN-KWPLVILHNKR 367
DWLEK+ +YEAIVDGANIGLYQQNF +G FS+ QL++V+K+LY SGN KWPL++LH +R
Sbjct: 330 DWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQLESVMKELYRESGNNKWPLILLHKRR 389
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+++L ENP+HRNLVEEW GVLY TP GSNDDWYWLYAA KL+CLLVTNDEMRDHIFEL
Sbjct: 390 VKTLLENPTHRNLVEEWISNGVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFEL 449
Query: 428 LGSNFFLKWKERHQVHYTFVKGNLKLQMPPPYSSVIQESEKGSWHVPILVKGN--SSQTW 485
LGS FF KWKERHQV YTFVKGNLKL+MP P+S VIQESEKGSWH P+ + N SS+TW
Sbjct: 450 LGSTFFQKWKERHQVRYTFVKGNLKLEMPSPFSVVIQESEKGSWHFPVSCENNEESSRTW 509
Query: 486 LCITRPNVCES 496
+CI+R ++ +S
Sbjct: 510 MCISRQSILDS 520
>TAIR|locus:2141662 [details] [associations]
symbol:PRORP3 "AT4G21900" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0016020 "membrane"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0001682
"tRNA 5'-leader removal" evidence=IDA] [GO:0004526 "ribonuclease P
activity" evidence=IDA] [GO:0006397 "mRNA processing" evidence=IMP]
[GO:0043144 "snoRNA processing" evidence=IMP] GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006397 EMBL:AL161556
PROSITE:PS51375 EMBL:AL021890 GO:GO:0043144 InterPro:IPR021869
Pfam:PF11977 eggNOG:NOG68490 GO:GO:0004526 GO:GO:0001682
HOGENOM:HOG000006117 EMBL:AK226669 EMBL:AK230440 IPI:IPI00543150
IPI:IPI00892032 PIR:T05472 RefSeq:NP_193921.2 UniGene:At.74070
ProteinModelPortal:F4JKB6 PRIDE:F4JKB6 EnsemblPlants:AT4G21900.1
GeneID:828279 KEGG:ath:AT4G21900 TAIR:At4g21900 OMA:SCEPMAD
Uniprot:F4JKB6
Length = 576
Score = 1518 (539.4 bits), Expect = 1.0e-155, P = 1.0e-155
Identities = 295/485 (60%), Positives = 365/485 (75%)
Query: 23 ETNFLINLQSCTKSKDLTTAISLYESA-HSQNLRLSLHHFNALLYLCSDSATDPSSKDSA 81
E + LINL SC+K KDL+ A++LY++A S ++RL+ HF +LLYLCS +DPS + A
Sbjct: 89 EKSLLINLHSCSKRKDLSAALALYDAAITSSDIRLNQQHFQSLLYLCSAFISDPSLQTVA 148
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPRLRTY 140
+ GF++FD+M+S+ + PNE+SVT+VARLAA+K DGDYAF L+K + V VPRLRTY
Sbjct: 149 IDRGFQIFDRMVSSGISPNESSVTAVARLAAAKGDGDYAFKLVKDLVAVGGVSVPRLRTY 208
Query: 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200
PAL CFC+ LEAEK YEVE+HM G+ LE+ EI+ALLKVSA TGR KVY+YLQKLR
Sbjct: 209 APALLCFCDTLEAEKGYEVEDHMDASGIVLEEAEISALLKVSAATGRENKVYRYLQKLRE 268
Query: 201 TVRCVNEETGKIIEDWFSGQKV-----NGVSCDLGLVKNAVLKNXXXXXXXXXXXXXKWV 255
V CV+EET K IE+WF G K NG+ D+ L++ AVLKN KW+
Sbjct: 269 CVGCVSEETSKAIEEWFYGVKASEVSDNGIGSDIELLRAAVLKNGGGWHGLGWVGEGKWI 328
Query: 256 VKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKAN-------FSEFQ 308
VK+G+V +GKC SC + LACVD ++ ETE F S+ LAMER+ K N FSEFQ
Sbjct: 329 VKKGNVSSAGKCLSCDEHLACVDTNEVETEDFVNSLVTLAMERKAKMNSCEPMADFSEFQ 388
Query: 309 DWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKR 367
+WLEK+ +YEAI+DGANIGLYQQNF +GGFS+PQL+AVVK+LY +SG+K PL++LH KR
Sbjct: 389 EWLEKHGDYEAILDGANIGLYQQNFADGGFSLPQLEAVVKELYNKSGSKKQPLILLHKKR 448
Query: 368 LRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFEL 427
+ +L ENP+HRNLVEEW VLY TP GSNDDWYWLYAA KL+CLLVTNDEMRDHIFEL
Sbjct: 449 VNALLENPNHRNLVEEWINNNVLYATPPGSNDDWYWLYAAAKLKCLLVTNDEMRDHIFEL 508
Query: 428 LGSNFFLKWKERHQVHYTFVKGNLKLQMPPPYSSVIQESEKGSWHVPILV--KGNSSQTW 485
L ++FF KWKERHQV +TFVKG LKL+MPPP+S VIQESEKGSWHVPI K S ++W
Sbjct: 509 LSNSFFQKWKERHQVRFTFVKGCLKLEMPPPFSVVIQESEKGSWHVPITSQDKEESLRSW 568
Query: 486 LCITR 490
+CITR
Sbjct: 569 MCITR 573
>TAIR|locus:2045432 [details] [associations]
symbol:PRORP1 "proteinaceous RNase P 1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006855 "drug transmembrane transport"
evidence=IEA] [GO:0015238 "drug transmembrane transporter activity"
evidence=IEA] [GO:0015297 "antiporter activity" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0055085 "transmembrane
transport" evidence=IEA] [GO:0004526 "ribonuclease P activity"
evidence=IMP;IDA] [GO:0008033 "tRNA processing" evidence=IDA]
[GO:0009507 "chloroplast" evidence=IDA] InterPro:IPR002885
GO:GO:0005739 GO:GO:0009507 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0008033 PROSITE:PS51375 EMBL:AC006223 Pfam:PF01535
Pfam:PF13812 eggNOG:NOG68490 GO:GO:0004526 EMBL:AY091059
EMBL:BT015418 IPI:IPI00540508 PIR:E84730 RefSeq:NP_850186.1
UniGene:At.38106 PDB:4G23 PDB:4G24 PDB:4G25 PDB:4G26 PDBsum:4G23
PDBsum:4G24 PDBsum:4G25 PDBsum:4G26 ProteinModelPortal:Q66GI4
PaxDb:Q66GI4 PRIDE:Q66GI4 EnsemblPlants:AT2G32230.1 GeneID:817782
KEGG:ath:AT2G32230 GeneFarm:4941 TAIR:At2g32230
HOGENOM:HOG000006117 InParanoid:Q66GI4 OMA:KLDMCSK PhylomeDB:Q66GI4
ProtClustDB:CLSN2679969 Genevestigator:Q66GI4 Uniprot:Q66GI4
Length = 572
Score = 1093 (389.8 bits), Expect = 1.1e-110, P = 1.1e-110
Identities = 223/471 (47%), Positives = 312/471 (66%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCS--DSATDPSSKDSALRHGFR 87
L C+K D+ A+ LY+ A ++LS +H+N LLY+CS ++AT+ SS + L GF
Sbjct: 104 LDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATE-SSPNPGLSRGFD 162
Query: 88 VFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF 147
+F QM+ + V+PNEA+ T+ ARLA +K+D + AF ++K+M F + PRLR+Y PALF F
Sbjct: 163 IFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMK-AFGIQPRLRSYGPALFGF 221
Query: 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207
C +A+KAYEV+ HM + E+ E+AALLKVS +T +KVY+ LQ+LR VR V++
Sbjct: 222 CRKGDADKAYEVDAHMVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSK 281
Query: 208 ETGKIIEDWFSGQKVN--GVS-CDLGLVKNAVLKNXXXXXXXXXXXXXKWVVKRGSVDES 264
T +IE+WF + GV D+ +++AV+ KW VKR +DE+
Sbjct: 282 STFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSGGGGWHGQGWLGTGKWNVKRTEMDEN 341
Query: 265 GKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGA 324
G C C ++L C+DI+ ETE FA S+ LA EREVKANF++FQ+WLE++ ++A++DGA
Sbjct: 342 GVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDAVIDGA 401
Query: 325 NIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNK-WPLVILHNKRLRSLWEN-PSHRNLVE 382
N+GL Q FS QL+ V++ + S +K PLVILH R+ P +R L+E
Sbjct: 402 NMGLVNQR----SFSFFQLNNTVQRCQQISPSKRLPLVILHKSRVNGGPATYPKNRALLE 457
Query: 383 EWNEKGVLYMTPHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQV 442
+W G LY TP GSNDDWYWLYAAV +CLLVTNDEMRDH+F+LLG++FF +WKE+HQV
Sbjct: 458 KWKNAGALYATPPGSNDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGNSFFPRWKEKHQV 517
Query: 443 HYTFVKGN-LKLQMPPPYSSVIQESEKGSWHVPILVKGN--SSQTWLCITR 490
+ + + LKL MPPPYS VIQESE G+WHVP+ V+ + +S+ WLC R
Sbjct: 518 RISVTREDGLKLNMPPPYSIVIQESEDGTWHVPMSVEDDLQTSRQWLCAKR 568
>TAIR|locus:2175178 [details] [associations]
symbol:AT5G60430 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0006855 "drug
transmembrane transport" evidence=IEA] [GO:0015238 "drug
transmembrane transporter activity" evidence=IEA] [GO:0015297
"antiporter activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0055085 "transmembrane transport" evidence=IEA]
EMBL:CP002688 EMBL:AB011483 eggNOG:NOG68490 IPI:IPI00517211
RefSeq:NP_001032110.1 RefSeq:NP_200851.1 UniGene:At.49199
ProteinModelPortal:Q9FKK3 PaxDb:Q9FKK3 EnsemblPlants:AT5G60430.1
EnsemblPlants:AT5G60430.2 GeneID:836164 KEGG:ath:AT5G60430
TAIR:At5g60430 InParanoid:Q9FKK3 PhylomeDB:Q9FKK3
ProtClustDB:CLSN2686686 ArrayExpress:Q9FKK3 Genevestigator:Q9FKK3
Uniprot:Q9FKK3
Length = 156
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 64/120 (53%), Positives = 84/120 (70%)
Query: 231 LVKNAVLKNXXXXXXXXXXXXXKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQS 290
+++ AVLKN KW+VK+G+V +G+C SC +QLACVD ++ ET++F S
Sbjct: 1 MLREAVLKNGGGWHGHGWVGDGKWIVKKGNVSSTGRCLSCSEQLACVDTNEVETQKFVDS 60
Query: 291 VAALAMEREVKAN-------FSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQL 343
+ ALAMER+ K N FSEFQDWLEK+ +YEAIVDGANIGLYQQNF +G FS+ Q+
Sbjct: 61 LVALAMERKAKMNSCESDVVFSEFQDWLEKHGDYEAIVDGANIGLYQQNFVDGSFSLSQV 120
>RGD|1305089 [details] [associations]
symbol:RGD1305089 "similar to 1110008L16Rik protein"
species:10116 "Rattus norvegicus" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008033 "tRNA processing" evidence=IEA]
RGD:1305089 GO:GO:0005739 GO:GO:0008033 EMBL:CH473947
eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC OrthoDB:EOG4DBTFD
InterPro:IPR026318 PANTHER:PTHR13547 GeneTree:ENSGT00390000002201
HOGENOM:HOG000294131 EMBL:BC168878 IPI:IPI00367164
RefSeq:NP_001100200.1 UniGene:Rn.35652 PRIDE:B5DF07
Ensembl:ENSRNOT00000009304 GeneID:299050 KEGG:rno:299050
UCSC:RGD:1305089 CTD:299050 NextBio:644711 Genevestigator:B5DF07
Uniprot:B5DF07
Length = 587
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 62/263 (23%), Positives = 119/263 (45%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C SCG + + + E E +++ ++ +
Sbjct: 334 QWKGQFTTIQKSGQCSSCGRAIESIHLSPEEYEFLKETIMRDVIDGGDQYKKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ +++ ++ ++DG N+ + F +G S L +V +L +++ L H
Sbjct: 394 FERFVKSCPPFDIVIDGLNVA---KMFPKGRES-QNLLGIVSQLAQQNLQLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W ++ +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 450 RPSSQWR----KDEMEQVRKQAHCFFADNISEDDPFLLYATLNSGSHCKFITKDLLRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQVHYT--FVKGNLKLQMPPPYSSVIQESEKGSWHVPI---L 476
+ + F KW++ HQ+ T F+K L Q Y +V+Q + +WH+P L
Sbjct: 506 ACLPDARAQRLFFKWQQGHQLAITKGFLKSKLTFQHILSYDTVVQTTGD-TWHIPYDEDL 564
Query: 477 VKGNSSQT---WLCITR--PNVC 494
V +S + WLC+ R P C
Sbjct: 565 VPRSSCEVPTKWLCLQRKTPAPC 587
>MGI|MGI:1913382 [details] [associations]
symbol:1110008L16Rik "RIKEN cDNA 1110008L16 gene"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0008033 "tRNA
processing" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] MGI:MGI:1913382 GO:GO:0005739 GO:GO:0008033
EMBL:CH466526 eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC
OrthoDB:EOG4DBTFD InterPro:IPR026318 PANTHER:PTHR13547
EMBL:AK003589 EMBL:AK008749 EMBL:AK031144 EMBL:AK151976
EMBL:AK152028 EMBL:BC034876 EMBL:AK172942 IPI:IPI00172345
RefSeq:NP_079649.1 UniGene:Mm.383213 ProteinModelPortal:Q8JZY4
STRING:Q8JZY4 PhosphoSite:Q8JZY4 PRIDE:Q8JZY4
Ensembl:ENSMUST00000021411 GeneID:66132 KEGG:mmu:66132
UCSC:uc007noo.2 GeneTree:ENSGT00390000002201 HOGENOM:HOG000294131
InParanoid:Q6A076 NextBio:320728 Bgee:Q8JZY4 Genevestigator:Q8JZY4
Uniprot:Q8JZY4
Length = 584
Score = 180 (68.4 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 62/263 (23%), Positives = 114/263 (43%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + ++ +SG+C CG + + + E E + + ++ +
Sbjct: 331 QWKGQFTTIQKSGQCSGCGRTIEPIHLSPEEYEFLKEKIMRDVIDGGDQYKKTTPQELKR 390
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+ ++ ++ ++DG N+ + F +G S L VV +L +++ L H
Sbjct: 391 FESFVNSCPPFDIVIDGLNVA---KMFPKGRES-QNLLGVVSQLAQQNLQLLVLGRKHML 446
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W +E+ ++ + + S DD + LYA + C +T D +RDH
Sbjct: 447 RPSSQWRKEE----MEQVRKQAHCFFADNISEDDPFLLYATLNSGNHCKFITKDLLRDHK 502
Query: 424 --IFELLGSNFFLKWKERHQVHYT--FVKGNLKLQMPPPYSSVIQESEKGSWHVPI---L 476
+ + F KW++ HQ+ F K L Q Y +V+Q + SWH+P L
Sbjct: 503 ACLPDARTQRLFFKWQQGHQLAIMKGFQKSKLTFQHILSYDTVVQRTGD-SWHIPYDEDL 561
Query: 477 VKGNSSQT---WLCITR--PNVC 494
V+ +S + WLC+ R P+ C
Sbjct: 562 VQRSSCEVPTKWLCLQRKTPDPC 584
Score = 40 (19.1 bits), Expect = 3.7e-10, Sum P(2) = 3.7e-10
Identities = 19/78 (24%), Positives = 30/78 (38%)
Query: 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89
+Q +D+ TA +LY+ NL L A D D S D L +
Sbjct: 248 IQGALLHQDVNTAWNLYQELIGHNLIPPLETLKAFFDYGKDINDDHYS-DKLLD----IL 302
Query: 90 DQMLSNNVIPNEASVTSV 107
+ +N + P E+ S+
Sbjct: 303 LYLRNNQLYPGESFAHSI 320
>UNIPROTKB|O15091 [details] [associations]
symbol:KIAA0391 "Mitochondrial ribonuclease P protein 3"
species:9606 "Homo sapiens" [GO:0008033 "tRNA processing"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
GO:GO:0005739 EMBL:CH471078 GO:GO:0008033 EMBL:AB002389
EMBL:BX161394 EMBL:BX161487 EMBL:AK301931 EMBL:AK303508
EMBL:AK304066 EMBL:AL121594 EMBL:BC032221 EMBL:BC044580
IPI:IPI00004584 IPI:IPI00647491 IPI:IPI00915794 IPI:IPI00915950
RefSeq:NP_001243607.1 RefSeq:NP_001243608.1 RefSeq:NP_001243609.1
RefSeq:NP_001243610.1 RefSeq:NP_055487.2 UniGene:Hs.458487
UniGene:Hs.739309 ProteinModelPortal:O15091 IntAct:O15091
STRING:O15091 PhosphoSite:O15091 PaxDb:O15091 PRIDE:O15091
Ensembl:ENST00000557565 GeneID:9692 KEGG:hsa:9692 UCSC:uc001wsy.1
UCSC:uc001wsz.1 UCSC:uc001wtc.1 CTD:9692 GeneCards:GC14P035591
GeneCards:GC14P035592 H-InvDB:HIX0018405 H-InvDB:HIX0079614
HGNC:HGNC:19958 HPA:HPA020459 MIM:609947 neXtProt:NX_O15091
PharmGKB:PA134879499 eggNOG:NOG68490 HOVERGEN:HBG099441 OMA:LRDHKAC
OrthoDB:EOG4DBTFD PhylomeDB:O15091 ChiTaRS:KIAA0391 GenomeRNAi:9692
NextBio:36401 ArrayExpress:O15091 Bgee:O15091 CleanEx:HS_KIAA0391
Genevestigator:O15091 GermOnline:ENSG00000100890 InterPro:IPR026318
PANTHER:PTHR13547 Uniprot:O15091
Length = 583
Score = 170 (64.9 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 61/255 (23%), Positives = 106/255 (41%)
Query: 253 KWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAME------REVKANFSE 306
+W + +V +SG+C CG + + + E E + ++ +
Sbjct: 334 QWKGQFTTVRKSGQCSGCGKTIESIQLSPEEYECLKGKIMRDVIDGGDQYRKTTPQELKR 393
Query: 307 FQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNK 366
F+++++ ++ ++DG N+ E L VV +L +R+ L H
Sbjct: 394 FENFIKSRPPFDVVIDGLNVAKMFPKVRESQL----LLNVVSQLAKRNLRLLVLGRKHML 449
Query: 367 RLRSLWENPSHRNLVEEWNEKGVLYMTPHGSNDDWYWLYAAVKL--RCLLVTNDEMRDH- 423
R S W R+ +EE ++ + S DD + LYA + C +T D MRDH
Sbjct: 450 RRSSQWS----RDEMEEVQKQASCFFADDISEDDPFLLYATLHSGNHCRFITRDLMRDHK 505
Query: 424 --IFELLGSNFFLKWKERHQVHYT--FVKGNLKLQMPPPYSSVIQESEKGSWHVPI---L 476
+ + F KW++ HQ+ F L Q Y +V+Q + SWH+P L
Sbjct: 506 ACLPDAKTQRLFFKWQQGHQLAIVNRFPGSKLTFQRILSYDTVVQTTGD-SWHIPYDEDL 564
Query: 477 VKGNSSQT---WLCI 488
V+ S + WLC+
Sbjct: 565 VERCSCEVPTKWLCL 579
>TAIR|locus:2020808 [details] [associations]
symbol:AT1G03560 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR011990
InterPro:IPR002885 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005739 EMBL:AC002560 Gene3D:1.25.40.10 PROSITE:PS51375
Pfam:PF01535 TIGRFAMs:TIGR00756 Pfam:PF13041 EMBL:AK229132
IPI:IPI00539471 PIR:T00902 RefSeq:NP_171855.1 UniGene:At.42537
ProteinModelPortal:Q9LR67 SMR:Q9LR67 PaxDb:Q9LR67 PRIDE:Q9LR67
EnsemblPlants:AT1G03560.1 GeneID:839458 KEGG:ath:AT1G03560
GeneFarm:4851 TAIR:At1g03560 eggNOG:NOG311045 HOGENOM:HOG000242323
InParanoid:Q9LR67 OMA:SKIGIGY PhylomeDB:Q9LR67
ProtClustDB:CLSN2679683 ArrayExpress:Q9LR67 Genevestigator:Q9LR67
Uniprot:Q9LR67
Length = 660
Score = 126 (49.4 bits), Expect = 0.00014, P = 0.00014
Identities = 40/183 (21%), Positives = 81/183 (44%)
Query: 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLY-LCSDSATDPSSKDSALRH 84
++ +Q+C D + ++LY+ + +++ H F+ ++ LC K+ L
Sbjct: 295 YMTMIQACYADSDFGSCVALYQEMDEKGIQVPPHAFSLVIGGLC---------KEGKLNE 345
Query: 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL 144
G+ VF+ M+ PN A T + A + A L+ RM +E P + TY +
Sbjct: 346 GYTVFENMIRKGSKPNVAIYTVLIDGYAKSGSVEDAIRLLHRMIDE-GFKPDVVTYSVVV 404
Query: 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204
C+N E+A + GL++ ++L+ + GRV++ + +++ S C
Sbjct: 405 NGLCKNGRVEEALDYFHTCRFDGLAINSMFYSSLIDGLGKAGRVDEAERLFEEM-SEKGC 463
Query: 205 VNE 207
+
Sbjct: 464 TRD 466
>TAIR|locus:2086032 [details] [associations]
symbol:PPR40 "pentatricopeptide (PPR) domain protein 40"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006979 "response to oxidative stress"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0009737 "response to abscisic acid stimulus" evidence=IMP]
[GO:0042775 "mitochondrial ATP synthesis coupled electron
transport" evidence=IMP] InterPro:IPR011990 InterPro:IPR002885
GO:GO:0005739 GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0006979 GO:GO:0009651 Gene3D:1.25.40.10 EMBL:AB026636
PROSITE:PS51375 Pfam:PF13812 TIGRFAMs:TIGR00756 GO:GO:0042775
Pfam:PF13041 IPI:IPI00518270 RefSeq:NP_188314.1 UniGene:At.65096
ProteinModelPortal:Q9LSQ2 SMR:Q9LSQ2 STRING:Q9LSQ2 PaxDb:Q9LSQ2
PRIDE:Q9LSQ2 EnsemblPlants:AT3G16890.1 GeneID:820944
KEGG:ath:AT3G16890 TAIR:At3g16890 eggNOG:NOG329090
HOGENOM:HOG000244117 InParanoid:Q9LSQ2 OMA:CALVESW PhylomeDB:Q9LSQ2
ProtClustDB:CLSN2684178 Genevestigator:Q9LSQ2 Uniprot:Q9LSQ2
Length = 659
Score = 121 (47.7 bits), Expect = 0.00050, P = 0.00050
Identities = 34/135 (25%), Positives = 64/135 (47%)
Query: 82 LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYD 141
++ F F +ML + PNE + + R S D D + L +M E + P L Y+
Sbjct: 511 IKDAFDCFKEMLEWGIEPNEITYNILIRSCCSTGDTDRSVKLFAKMK-ENGLSPDLYAYN 569
Query: 142 PALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201
+ FC+ + +KA E+ + M +GL + + L+K +E+GR + + +
Sbjct: 570 ATIQSFCKMRKVKKAEELLKTMLRIGLKPDNFTYSTLIKALSESGRESEAREMFSSIERH 629
Query: 202 VRCVNEE-TGKIIED 215
CV + T +++E+
Sbjct: 630 -GCVPDSYTKRLVEE 643
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.317 0.132 0.399 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 501 471 0.00099 118 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 627 (67 KB)
Total size of DFA: 329 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.08u 0.11s 39.19t Elapsed: 00:00:02
Total cpu time: 39.08u 0.11s 39.19t Elapsed: 00:00:02
Start: Sat May 11 12:04:57 2013 End: Sat May 11 12:04:59 2013