Query 010790
Match_columns 501
No_of_seqs 439 out of 2710
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 14:18:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010790.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010790hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g26_A Pentatricopeptide repea 100.0 2E-109 7E-114 881.4 51.6 485 4-493 7-500 (501)
2 4g26_A Pentatricopeptide repea 100.0 5.9E-27 2E-31 248.3 23.5 173 40-221 7-189 (501)
3 3v33_A Ribonuclease ZC3H12A; r 99.9 1.2E-26 4.2E-31 212.7 10.0 139 315-460 23-171 (223)
4 3v32_B Ribonuclease ZC3H12A; r 99.9 3.2E-26 1.1E-30 205.6 10.5 140 314-460 22-171 (185)
5 3spa_A Mtrpol, DNA-directed RN 99.8 5.6E-20 1.9E-24 201.9 12.5 149 55-217 124-282 (1134)
6 3spa_A Mtrpol, DNA-directed RN 99.8 4.9E-20 1.7E-24 202.3 9.5 149 24-186 128-286 (1134)
7 2xpi_A Anaphase-promoting comp 99.6 1.4E-15 4.7E-20 163.0 12.1 265 24-314 85-437 (597)
8 2xpi_A Anaphase-promoting comp 99.5 8E-13 2.7E-17 141.4 24.9 182 23-218 305-486 (597)
9 2y4t_A DNAJ homolog subfamily 99.0 1.3E-07 4.6E-12 96.7 26.1 179 24-217 27-221 (450)
10 1w3b_A UDP-N-acetylglucosamine 99.0 4.2E-07 1.5E-11 91.4 28.7 163 24-200 102-265 (388)
11 2y4t_A DNAJ homolog subfamily 98.9 3.3E-07 1.1E-11 93.8 24.9 167 23-206 94-289 (450)
12 3mkr_A Coatomer subunit epsilo 98.9 8.5E-08 2.9E-12 93.7 19.3 160 24-201 66-229 (291)
13 2ho1_A Type 4 fimbrial biogene 98.9 2.1E-07 7E-12 87.4 20.6 166 24-201 38-204 (252)
14 2vq2_A PILW, putative fimbrial 98.9 7.6E-07 2.6E-11 81.3 23.9 166 24-201 9-176 (225)
15 1w3b_A UDP-N-acetylglucosamine 98.8 7.5E-07 2.6E-11 89.6 25.3 164 24-201 34-198 (388)
16 2ho1_A Type 4 fimbrial biogene 98.8 8.6E-07 3E-11 83.1 24.1 173 23-209 71-244 (252)
17 2vq2_A PILW, putative fimbrial 98.8 9.5E-07 3.2E-11 80.7 23.3 175 23-210 42-218 (225)
18 1b89_A Protein (clathrin heavy 98.8 3E-09 1E-13 109.0 6.7 238 23-353 32-269 (449)
19 3as5_A MAMA; tetratricopeptide 98.8 1E-06 3.5E-11 77.6 20.1 165 24-201 9-173 (186)
20 3nf1_A KLC 1, kinesin light ch 98.7 2.1E-06 7.2E-11 82.6 22.9 168 24-200 28-223 (311)
21 2q7f_A YRRB protein; TPR, prot 98.7 2.1E-06 7.2E-11 79.6 22.0 164 25-201 25-188 (243)
22 4eqf_A PEX5-related protein; a 98.7 1.3E-06 4.5E-11 86.9 21.3 179 24-217 66-257 (365)
23 1fch_A Peroxisomal targeting s 98.7 4E-06 1.4E-10 83.0 24.3 179 24-217 65-261 (368)
24 4eqf_A PEX5-related protein; a 98.7 2.3E-06 7.8E-11 85.1 22.4 183 23-217 99-291 (365)
25 2q7f_A YRRB protein; TPR, prot 98.7 7.1E-07 2.4E-11 82.8 17.3 166 23-201 57-222 (243)
26 3uq3_A Heat shock protein STI1 98.6 1.3E-06 4.5E-11 81.5 18.2 165 24-200 6-201 (258)
27 1fch_A Peroxisomal targeting s 98.6 7E-06 2.4E-10 81.3 23.9 169 23-201 98-280 (368)
28 3mkr_A Coatomer subunit epsilo 98.6 4.7E-06 1.6E-10 81.2 21.6 164 25-209 103-270 (291)
29 3cv0_A Peroxisome targeting si 98.6 1.9E-05 6.5E-10 76.3 24.6 173 24-201 56-269 (327)
30 3vtx_A MAMA; tetratricopeptide 98.6 2E-05 6.8E-10 70.1 22.8 165 24-201 6-170 (184)
31 2gw1_A Mitochondrial precursor 98.6 9.5E-06 3.3E-10 84.0 23.4 178 25-217 8-280 (514)
32 3uq3_A Heat shock protein STI1 98.5 5.3E-06 1.8E-10 77.3 18.9 168 23-201 38-236 (258)
33 2pl2_A Hypothetical conserved 98.5 5.1E-06 1.8E-10 76.9 18.5 162 24-199 40-212 (217)
34 3hym_B Cell division cycle pro 98.5 1.1E-05 3.7E-10 78.2 21.7 162 25-198 127-296 (330)
35 2fo7_A Synthetic consensus TPR 98.5 5.6E-06 1.9E-10 68.4 17.0 129 25-165 3-131 (136)
36 3cv0_A Peroxisome targeting si 98.5 1E-05 3.4E-10 78.3 21.3 163 25-201 23-201 (327)
37 2pl2_A Hypothetical conserved 98.5 1.8E-05 6.1E-10 73.2 22.0 168 24-208 6-185 (217)
38 1b89_A Protein (clathrin heavy 98.5 4.2E-07 1.4E-11 93.1 10.1 134 25-191 63-196 (449)
39 3hym_B Cell division cycle pro 98.5 1.9E-05 6.4E-10 76.5 21.6 166 24-201 57-222 (330)
40 2fo7_A Synthetic consensus TPR 98.5 9.1E-06 3.1E-10 67.1 16.5 130 60-201 3-132 (136)
41 2ond_A Cleavage stimulation fa 98.4 4.2E-05 1.4E-09 74.7 23.4 165 24-201 100-270 (308)
42 3nf1_A KLC 1, kinesin light ch 98.4 6.4E-06 2.2E-10 79.1 16.3 168 24-200 70-306 (311)
43 3edt_B KLC 2, kinesin light ch 98.4 3.7E-06 1.3E-10 79.4 13.7 168 24-200 44-280 (283)
44 1ouv_A Conserved hypothetical 98.4 0.00015 5.2E-09 68.8 24.9 156 25-201 8-179 (273)
45 1ouv_A Conserved hypothetical 98.3 0.00017 5.9E-09 68.4 24.6 160 22-202 37-216 (273)
46 1xnf_A Lipoprotein NLPI; TPR, 98.3 7.8E-05 2.7E-09 70.2 22.0 165 24-201 44-244 (275)
47 3ieg_A DNAJ homolog subfamily 98.3 8.7E-05 3E-09 72.4 22.9 164 24-201 4-183 (359)
48 3ieg_A DNAJ homolog subfamily 98.3 6.9E-05 2.4E-09 73.1 21.9 167 23-201 37-217 (359)
49 2gw1_A Mitochondrial precursor 98.3 4.1E-05 1.4E-09 79.2 20.9 180 24-216 305-491 (514)
50 1xnf_A Lipoprotein NLPI; TPR, 98.3 2.3E-05 7.9E-10 73.9 17.3 154 35-201 17-173 (275)
51 2ond_A Cleavage stimulation fa 98.3 0.00018 6.3E-09 70.0 23.8 170 24-206 51-238 (308)
52 4i17_A Hypothetical protein; T 98.2 0.00013 4.6E-09 67.1 20.9 151 24-188 8-169 (228)
53 3fp2_A TPR repeat-containing p 98.2 5.4E-05 1.9E-09 78.9 19.7 163 25-201 245-407 (537)
54 3edt_B KLC 2, kinesin light ch 98.2 5.7E-05 1.9E-09 71.0 16.6 159 33-200 11-197 (283)
55 4gyw_A UDP-N-acetylglucosamine 98.2 0.00014 4.8E-09 79.9 21.8 161 24-200 10-173 (723)
56 3u4t_A TPR repeat-containing p 98.1 0.00023 7.7E-09 67.0 19.7 164 26-201 6-171 (272)
57 3as5_A MAMA; tetratricopeptide 98.1 0.00023 8E-09 62.1 18.5 132 23-166 42-173 (186)
58 4abn_A Tetratricopeptide repea 98.0 0.00013 4.4E-09 76.1 18.1 166 23-201 102-287 (474)
59 2ooe_A Cleavage stimulation fa 98.0 0.00044 1.5E-08 72.7 22.1 165 23-201 321-492 (530)
60 3u4t_A TPR repeat-containing p 98.0 0.00039 1.3E-08 65.3 19.5 165 24-201 38-208 (272)
61 2ooe_A Cleavage stimulation fa 98.0 0.00035 1.2E-08 73.5 21.1 165 24-202 273-455 (530)
62 3fp2_A TPR repeat-containing p 98.0 0.00037 1.3E-08 72.5 20.8 129 24-164 277-405 (537)
63 3mv2_B Coatomer subunit epsilo 98.0 0.00018 6.3E-09 70.3 16.2 145 42-200 85-239 (310)
64 4abn_A Tetratricopeptide repea 97.9 9.6E-05 3.3E-09 77.1 14.7 169 23-198 137-318 (474)
65 3mv2_B Coatomer subunit epsilo 97.9 0.0008 2.7E-08 65.8 20.1 170 23-209 100-288 (310)
66 2yhc_A BAMD, UPF0169 lipoprote 97.9 0.001 3.5E-08 61.4 19.7 165 24-201 5-213 (225)
67 1qqe_A Vesicular transport pro 97.9 0.00015 5.1E-09 70.2 13.7 167 25-200 39-227 (292)
68 3qky_A Outer membrane assembly 97.8 0.0025 8.6E-08 59.8 20.0 172 23-207 15-228 (261)
69 2h6f_A Protein farnesyltransfe 97.8 0.0013 4.3E-08 66.6 18.7 171 24-209 98-275 (382)
70 2vsy_A XCC0866; transferase, g 97.7 0.001 3.5E-08 70.6 18.5 153 36-201 2-157 (568)
71 3u3w_A Transcriptional activat 97.7 0.0012 3.9E-08 63.7 17.2 166 26-199 78-264 (293)
72 3vtx_A MAMA; tetratricopeptide 97.7 0.0024 8.1E-08 56.3 17.9 133 57-201 4-136 (184)
73 2qfc_A PLCR protein; TPR, HTH, 97.7 0.0032 1.1E-07 60.5 20.2 166 26-199 78-264 (293)
74 1hh8_A P67PHOX, NCF-2, neutrop 97.7 0.0025 8.4E-08 57.5 17.7 126 27-166 10-150 (213)
75 2r5s_A Uncharacterized protein 97.7 0.00055 1.9E-08 60.5 13.0 163 24-200 7-172 (176)
76 1na0_A Designed protein CTPR3; 97.7 0.0023 7.9E-08 51.5 15.9 96 102-200 10-105 (125)
77 1na0_A Designed protein CTPR3; 97.6 0.0013 4.5E-08 53.0 13.9 103 77-183 20-122 (125)
78 4i17_A Hypothetical protein; T 97.6 0.0035 1.2E-07 57.4 17.8 136 57-206 6-149 (228)
79 2h6f_A Protein farnesyltransfe 97.6 0.003 1E-07 63.8 18.8 178 24-217 132-319 (382)
80 1hh8_A P67PHOX, NCF-2, neutrop 97.6 0.0066 2.2E-07 54.6 18.8 116 81-202 21-151 (213)
81 3ulq_A Response regulator aspa 97.5 0.0013 4.6E-08 65.6 15.2 162 31-200 111-292 (383)
82 1qqe_A Vesicular transport pro 97.5 0.0016 5.6E-08 62.7 14.9 164 24-198 78-266 (292)
83 3gw4_A Uncharacterized protein 97.5 0.0012 4.1E-08 58.9 13.0 158 34-200 3-175 (203)
84 1xi4_A Clathrin heavy chain; a 97.5 0.01 3.5E-07 68.3 22.9 133 35-197 1088-1220(1630)
85 3qou_A Protein YBBN; thioredox 97.5 0.0021 7.1E-08 62.0 15.3 160 26-198 120-281 (287)
86 1a17_A Serine/threonine protei 97.5 0.0037 1.3E-07 53.5 15.4 93 25-127 15-107 (166)
87 4a1s_A PINS, partner of inscut 97.5 0.0007 2.4E-08 67.9 12.1 168 25-200 128-331 (411)
88 3ro2_A PINS homolog, G-protein 97.5 0.0017 5.8E-08 62.1 14.3 167 25-200 7-211 (338)
89 2ifu_A Gamma-SNAP; membrane fu 97.5 0.0013 4.4E-08 63.9 13.5 165 25-199 38-222 (307)
90 3rjv_A Putative SEL1 repeat pr 97.4 0.03 1E-06 50.9 21.9 166 23-204 18-200 (212)
91 3urz_A Uncharacterized protein 97.4 0.0068 2.3E-07 55.1 17.4 165 29-213 10-196 (208)
92 4a1s_A PINS, partner of inscut 97.4 0.00061 2.1E-08 68.4 11.1 166 25-200 50-251 (411)
93 1a17_A Serine/threonine protei 97.4 0.0073 2.5E-07 51.6 16.6 127 61-199 16-144 (166)
94 3q15_A PSP28, response regulat 97.4 0.009 3.1E-07 59.5 19.5 161 32-201 110-290 (378)
95 3sf4_A G-protein-signaling mod 97.4 0.00085 2.9E-08 66.7 11.6 168 25-200 129-335 (406)
96 3ro2_A PINS homolog, G-protein 97.4 0.00087 3E-08 64.2 11.2 169 25-201 125-332 (338)
97 3ulq_A Response regulator aspa 97.4 0.0024 8.3E-08 63.7 14.4 164 25-200 186-367 (383)
98 2xm6_A Protein corresponding t 97.3 0.048 1.7E-06 56.3 24.5 160 25-201 41-216 (490)
99 1hz4_A MALT regulatory protein 97.3 0.017 5.7E-07 57.1 20.0 166 26-200 96-281 (373)
100 3q15_A PSP28, response regulat 97.3 0.005 1.7E-07 61.4 16.2 165 25-200 184-364 (378)
101 4gyw_A UDP-N-acetylglucosamine 97.3 0.006 2.1E-07 66.9 17.8 135 58-207 9-144 (723)
102 3sf4_A G-protein-signaling mod 97.3 0.0023 7.8E-08 63.5 13.3 167 25-200 11-215 (406)
103 2xm6_A Protein corresponding t 97.3 0.067 2.3E-06 55.2 24.9 162 24-202 76-253 (490)
104 2vyi_A SGTA protein; chaperone 97.3 0.0098 3.4E-07 48.1 14.8 103 81-187 27-129 (131)
105 2e2e_A Formate-dependent nitri 97.2 0.0041 1.4E-07 54.4 12.5 122 76-201 20-144 (177)
106 2pzi_A Probable serine/threoni 97.2 0.0037 1.3E-07 68.1 14.6 159 34-208 402-568 (681)
107 1hz4_A MALT regulatory protein 97.2 0.02 6.9E-07 56.4 18.7 167 25-200 137-321 (373)
108 2vyi_A SGTA protein; chaperone 97.2 0.012 4.3E-07 47.4 14.3 116 24-152 13-129 (131)
109 2vsy_A XCC0866; transferase, g 97.2 0.014 4.7E-07 61.7 18.3 133 23-167 23-158 (568)
110 2lni_A Stress-induced-phosphop 97.1 0.0085 2.9E-07 48.9 13.2 101 98-201 13-113 (133)
111 2lni_A Stress-induced-phosphop 97.1 0.011 3.8E-07 48.2 13.5 118 57-186 15-132 (133)
112 1elr_A TPR2A-domain of HOP; HO 97.0 0.019 6.5E-07 46.4 14.5 108 102-213 5-118 (131)
113 2dba_A Smooth muscle cell asso 97.0 0.015 5.2E-07 48.4 14.0 99 99-201 26-128 (148)
114 4e6h_A MRNA 3'-END-processing 97.0 0.0054 1.8E-07 66.7 13.7 166 25-202 345-534 (679)
115 3q49_B STIP1 homology and U bo 97.0 0.019 6.6E-07 47.4 14.3 99 99-200 7-105 (137)
116 1elw_A TPR1-domain of HOP; HOP 97.0 0.016 5.4E-07 45.9 13.2 99 100-201 3-101 (118)
117 2kck_A TPR repeat; tetratricop 97.0 0.0084 2.9E-07 47.2 11.1 99 101-201 6-106 (112)
118 4e6h_A MRNA 3'-END-processing 96.9 0.02 6.9E-07 62.2 17.3 181 25-219 380-586 (679)
119 2ifu_A Gamma-SNAP; membrane fu 96.9 0.0066 2.3E-07 58.8 12.3 157 25-194 78-254 (307)
120 4ga2_A E3 SUMO-protein ligase 96.9 0.0099 3.4E-07 51.0 12.1 124 76-208 7-134 (150)
121 2e2e_A Formate-dependent nitri 96.9 0.0076 2.6E-07 52.7 11.6 121 34-166 21-144 (177)
122 1p5q_A FKBP52, FK506-binding p 96.9 0.021 7.3E-07 56.2 16.1 142 25-198 149-291 (336)
123 1p5q_A FKBP52, FK506-binding p 96.9 0.025 8.4E-07 55.7 16.2 111 60-201 149-259 (336)
124 1elr_A TPR2A-domain of HOP; HO 96.8 0.015 5.2E-07 47.0 12.1 111 59-181 5-121 (131)
125 3ro3_A PINS homolog, G-protein 96.8 0.011 3.8E-07 49.6 11.1 95 25-127 11-115 (164)
126 3sz7_A HSC70 cochaperone (SGT) 96.8 0.022 7.7E-07 49.1 13.3 99 100-201 10-108 (164)
127 3gyz_A Chaperone protein IPGC; 96.8 0.018 6.2E-07 49.8 12.4 103 101-209 36-139 (151)
128 3upv_A Heat shock protein STI1 96.8 0.029 1E-06 45.8 13.3 97 102-201 5-101 (126)
129 1xi4_A Clathrin heavy chain; a 96.8 0.051 1.8E-06 62.7 19.0 148 23-197 1134-1305(1630)
130 3qou_A Protein YBBN; thioredox 96.8 0.022 7.4E-07 54.7 14.3 146 61-219 120-267 (287)
131 2vgx_A Chaperone SYCD; alterna 96.7 0.021 7.2E-07 48.8 12.7 99 100-201 20-118 (148)
132 3ro3_A PINS homolog, G-protein 96.7 0.012 4.2E-07 49.3 10.9 133 60-200 11-157 (164)
133 2xcb_A PCRH, regulatory protei 96.7 0.025 8.7E-07 47.6 12.8 97 102-201 19-115 (142)
134 2xev_A YBGF; tetratricopeptide 96.7 0.054 1.8E-06 44.0 14.5 100 106-212 7-114 (129)
135 4gco_A Protein STI-1; structur 96.7 0.07 2.4E-06 44.1 15.2 101 103-208 15-115 (126)
136 4ga2_A E3 SUMO-protein ligase 96.7 0.0086 2.9E-07 51.4 9.6 138 33-186 7-148 (150)
137 3u3w_A Transcriptional activat 96.7 0.064 2.2E-06 51.2 16.9 119 81-200 90-224 (293)
138 1elw_A TPR1-domain of HOP; HOP 96.6 0.08 2.7E-06 41.6 14.9 97 59-166 5-101 (118)
139 2dba_A Smooth muscle cell asso 96.6 0.11 3.7E-06 42.9 16.4 94 23-127 28-125 (148)
140 4f3v_A ESX-1 secretion system 96.6 0.016 5.4E-07 55.8 12.1 129 24-166 103-237 (282)
141 2r5s_A Uncharacterized protein 96.6 0.016 5.6E-07 50.8 11.5 126 24-164 41-171 (176)
142 3rjv_A Putative SEL1 repeat pr 96.6 0.097 3.3E-06 47.4 17.1 143 40-201 3-158 (212)
143 3gw4_A Uncharacterized protein 96.6 0.017 5.7E-07 51.2 11.6 133 24-164 27-174 (203)
144 2kck_A TPR repeat; tetratricop 96.5 0.036 1.2E-06 43.3 11.7 94 25-127 8-103 (112)
145 2pzi_A Probable serine/threoni 96.5 0.014 4.7E-07 63.6 11.7 148 24-187 434-583 (681)
146 2yhc_A BAMD, UPF0169 lipoprote 96.4 0.14 4.7E-06 46.7 16.8 140 24-167 42-214 (225)
147 3gyz_A Chaperone protein IPGC; 96.4 0.13 4.4E-06 44.3 15.6 94 66-173 44-138 (151)
148 2fbn_A 70 kDa peptidylprolyl i 96.4 0.077 2.6E-06 47.2 14.7 158 30-199 11-184 (198)
149 3k9i_A BH0479 protein; putativ 96.4 0.0053 1.8E-07 50.0 6.2 82 81-164 5-88 (117)
150 3q49_B STIP1 homology and U bo 96.4 0.093 3.2E-06 43.0 14.1 98 57-165 8-105 (137)
151 3qky_A Outer membrane assembly 96.4 0.15 5E-06 47.4 16.9 119 81-201 30-177 (261)
152 3sz7_A HSC70 cochaperone (SGT) 96.3 0.11 3.7E-06 44.6 14.8 94 24-127 12-105 (164)
153 4gco_A Protein STI-1; structur 96.3 0.063 2.1E-06 44.4 12.5 93 25-127 15-107 (126)
154 2fbn_A 70 kDa peptidylprolyl i 96.3 0.075 2.6E-06 47.3 13.9 130 25-166 40-186 (198)
155 4gcn_A Protein STI-1; structur 96.2 0.094 3.2E-06 43.3 13.3 106 103-213 10-122 (127)
156 3upv_A Heat shock protein STI1 96.2 0.12 4.1E-06 42.0 13.6 93 25-127 6-98 (126)
157 2vgx_A Chaperone SYCD; alterna 96.1 0.14 4.8E-06 43.5 14.1 93 25-127 23-115 (148)
158 2xcb_A PCRH, regulatory protei 96.1 0.16 5.5E-06 42.4 14.3 83 81-166 33-115 (142)
159 2qfc_A PLCR protein; TPR, HTH, 96.1 0.37 1.3E-05 45.7 18.4 119 81-200 90-224 (293)
160 4b4t_Q 26S proteasome regulato 96.0 0.16 5.5E-06 50.8 16.5 162 31-200 12-203 (434)
161 3k9i_A BH0479 protein; putativ 96.0 0.015 5E-07 47.3 6.9 87 113-201 2-90 (117)
162 1hxi_A PEX5, peroxisome target 96.0 0.076 2.6E-06 43.5 11.3 93 104-200 20-113 (121)
163 4f3v_A ESX-1 secretion system 95.9 0.091 3.1E-06 50.4 13.1 120 81-206 117-240 (282)
164 3e4b_A ALGK; tetratricopeptide 95.9 0.48 1.7E-05 48.4 19.7 161 25-203 178-353 (452)
165 4g1t_A Interferon-induced prot 95.9 0.085 2.9E-06 53.5 13.9 175 24-201 248-459 (472)
166 4b4t_Q 26S proteasome regulato 95.9 0.2 6.8E-06 50.1 16.4 169 24-200 56-244 (434)
167 1wao_1 Serine/threonine protei 95.8 0.037 1.3E-06 57.4 10.8 118 31-161 14-134 (477)
168 1wao_1 Serine/threonine protei 95.8 0.033 1.1E-06 57.8 10.4 117 76-196 16-134 (477)
169 4g1t_A Interferon-induced prot 95.8 0.7 2.4E-05 46.6 20.2 171 24-208 95-281 (472)
170 2c2l_A CHIP, carboxy terminus 95.7 0.17 5.7E-06 48.2 14.2 97 100-200 3-100 (281)
171 2xev_A YBGF; tetratricopeptide 95.7 0.4 1.4E-05 38.5 14.7 90 30-127 9-102 (129)
172 3urz_A Uncharacterized protein 95.6 0.25 8.5E-06 44.4 14.4 134 29-179 60-197 (208)
173 1kt0_A FKBP51, 51 kDa FK506-bi 95.4 0.19 6.3E-06 51.7 14.2 141 25-198 270-412 (457)
174 4gcn_A Protein STI-1; structur 95.3 0.21 7E-06 41.1 11.7 104 61-176 11-120 (127)
175 3n71_A Histone lysine methyltr 95.3 0.25 8.7E-06 51.3 14.7 121 81-201 324-464 (490)
176 1kt0_A FKBP51, 51 kDa FK506-bi 95.1 0.25 8.4E-06 50.8 14.0 68 137-207 317-384 (457)
177 1klx_A Cysteine rich protein B 95.0 1.1 3.9E-05 37.2 15.8 113 79-203 8-128 (138)
178 2uy1_A Cleavage stimulation fa 95.0 0.75 2.6E-05 47.7 17.2 156 23-198 213-380 (493)
179 3rkv_A Putative peptidylprolyl 94.9 0.31 1.1E-05 41.5 12.1 103 102-208 12-131 (162)
180 1dce_A Protein (RAB geranylger 94.8 0.81 2.8E-05 48.4 17.2 175 35-217 41-235 (567)
181 1hxi_A PEX5, peroxisome target 94.8 0.27 9.2E-06 40.1 10.8 92 26-127 20-111 (121)
182 2c2l_A CHIP, carboxy terminus 94.7 0.56 1.9E-05 44.4 14.3 96 58-165 4-100 (281)
183 3n71_A Histone lysine methyltr 94.7 0.18 6.3E-06 52.4 11.5 126 32-165 318-463 (490)
184 2l6j_A TPR repeat-containing p 94.6 0.039 1.3E-06 43.4 5.1 65 100-166 3-67 (111)
185 1klx_A Cysteine rich protein B 94.5 1.3 4.6E-05 36.8 14.9 113 36-168 8-128 (138)
186 1ihg_A Cyclophilin 40; ppiase 94.4 0.4 1.4E-05 47.7 13.0 136 25-192 225-361 (370)
187 3mkq_A Coatomer beta'-subunit; 94.3 0.42 1.4E-05 52.1 14.1 96 81-198 667-762 (814)
188 1na3_A Designed protein CTPR2; 94.3 0.52 1.8E-05 35.1 10.8 80 101-183 9-88 (91)
189 1ihg_A Cyclophilin 40; ppiase 94.2 0.52 1.8E-05 46.9 13.2 65 136-201 272-336 (370)
190 3e4b_A ALGK; tetratricopeptide 94.1 2.1 7.3E-05 43.5 18.1 153 27-203 217-389 (452)
191 2uy1_A Cleavage stimulation fa 93.9 0.53 1.8E-05 48.8 13.2 110 81-200 301-412 (493)
192 3rkv_A Putative peptidylprolyl 93.8 1 3.6E-05 38.0 12.9 114 25-166 13-126 (162)
193 3dra_A Protein farnesyltransfe 93.6 3.4 0.00012 39.8 17.6 153 37-201 124-287 (306)
194 2kat_A Uncharacterized protein 93.6 0.79 2.7E-05 36.3 11.1 78 85-165 4-81 (115)
195 2kat_A Uncharacterized protein 93.6 0.49 1.7E-05 37.5 9.8 80 119-201 3-82 (115)
196 2if4_A ATFKBP42; FKBP-like, al 93.5 0.16 5.6E-06 49.8 7.9 114 81-200 194-327 (338)
197 2if4_A ATFKBP42; FKBP-like, al 93.4 0.25 8.6E-06 48.4 9.2 128 25-166 181-328 (338)
198 3ma5_A Tetratricopeptide repea 92.3 0.72 2.5E-05 35.9 8.7 62 100-163 6-67 (100)
199 3ma5_A Tetratricopeptide repea 92.0 0.92 3.1E-05 35.2 9.1 81 136-217 6-87 (100)
200 2hr2_A Hypothetical protein; a 91.9 1.3 4.4E-05 38.5 10.5 94 104-200 14-130 (159)
201 2l6j_A TPR repeat-containing p 91.5 0.66 2.2E-05 36.0 7.7 68 58-137 4-71 (111)
202 3qwp_A SET and MYND domain-con 91.3 1.4 4.6E-05 44.9 11.8 92 107-199 293-398 (429)
203 3qww_A SET and MYND domain-con 91.2 0.82 2.8E-05 46.6 10.0 87 113-199 310-409 (433)
204 3dss_A Geranylgeranyl transfer 91.0 4.3 0.00015 39.6 14.5 177 25-210 28-229 (331)
205 1na3_A Designed protein CTPR2; 90.1 1.6 5.6E-05 32.2 8.6 64 137-201 9-72 (91)
206 3qwp_A SET and MYND domain-con 89.8 2.1 7.3E-05 43.4 11.7 93 27-127 291-397 (429)
207 2hr2_A Hypothetical protein; a 89.8 3.5 0.00012 35.7 11.3 95 25-127 13-128 (159)
208 3mkq_B Coatomer subunit alpha; 89.8 5.2 0.00018 35.2 12.5 96 80-197 19-114 (177)
209 3qww_A SET and MYND domain-con 89.7 1.9 6.4E-05 43.9 11.1 84 81-164 313-409 (433)
210 3mkq_A Coatomer beta'-subunit; 89.5 3.4 0.00012 44.7 13.9 84 56-163 679-762 (814)
211 3ly7_A Transcriptional activat 87.6 8.5 0.00029 38.1 13.8 154 54-216 190-352 (372)
212 3q7a_A Farnesyltransferase alp 87.5 22 0.00077 34.7 17.3 167 38-208 140-338 (349)
213 3q7a_A Farnesyltransferase alp 87.4 23 0.00078 34.7 20.0 171 26-210 57-244 (349)
214 1pc2_A Mitochondria fission pr 86.9 6.2 0.00021 33.8 10.8 86 77-166 9-100 (152)
215 3ly7_A Transcriptional activat 84.5 12 0.00042 36.9 13.0 146 23-176 194-347 (372)
216 2kc7_A BFR218_protein; tetratr 84.2 5.5 0.00019 29.9 8.6 55 109-166 8-64 (99)
217 2kc7_A BFR218_protein; tetratr 83.6 3.9 0.00013 30.9 7.5 57 144-201 7-64 (99)
218 3dss_A Geranylgeranyl transfer 83.6 33 0.0011 33.2 17.0 152 39-201 90-267 (331)
219 2ff4_A Probable regulatory pro 82.4 8 0.00027 38.5 11.1 118 99-217 110-255 (388)
220 3mkq_B Coatomer subunit alpha; 81.9 26 0.00088 30.7 13.6 129 31-198 13-141 (177)
221 3u64_A Protein TP_0956; tetrat 80.4 21 0.00071 34.1 12.4 127 59-198 155-295 (301)
222 1zu2_A Mitochondrial import re 79.4 15 0.00051 31.6 10.2 97 78-180 14-132 (158)
223 3dra_A Protein farnesyltransfe 78.9 46 0.0016 31.7 19.0 152 26-187 70-235 (306)
224 1k1a_A B-cell lymphoma 3-encod 78.0 3.8 0.00013 36.9 6.5 155 28-205 11-176 (241)
225 1zu2_A Mitochondrial import re 77.6 7.5 0.00026 33.5 7.8 122 34-166 13-147 (158)
226 1pc2_A Mitochondria fission pr 75.7 27 0.00092 29.7 10.7 96 117-217 14-114 (152)
227 1wy6_A Hypothetical protein ST 75.6 25 0.00087 29.6 9.9 148 25-203 7-156 (172)
228 1v54_E Cytochrome C oxidase po 75.3 9 0.00031 30.3 6.8 59 85-145 29-87 (109)
229 2v5f_A Prolyl 4-hydroxylase su 75.2 18 0.00061 28.0 9.0 66 100-165 4-74 (104)
230 2ff4_A Probable regulatory pro 75.0 13 0.00045 36.9 10.0 69 104-174 174-247 (388)
231 4h7y_A Dual specificity protei 68.7 52 0.0018 28.1 10.6 106 100-208 12-130 (161)
232 4gns_B Protein CSD3, chitin bi 68.4 57 0.0019 35.4 13.6 129 60-198 250-397 (754)
233 3hra_A Ankyrin repeat family p 67.7 6.8 0.00023 34.0 5.3 161 30-206 9-172 (201)
234 1nzn_A CGI-135 protein, fissio 67.1 37 0.0013 27.9 9.2 83 81-166 16-103 (126)
235 1v54_E Cytochrome C oxidase po 67.1 45 0.0015 26.4 9.0 63 116-180 25-87 (109)
236 1wy6_A Hypothetical protein ST 67.0 57 0.0019 27.5 14.4 118 81-221 22-139 (172)
237 1dce_A Protein (RAB geranylger 65.7 91 0.0031 32.4 14.4 117 81-201 44-173 (567)
238 4gns_B Protein CSD3, chitin bi 65.0 46 0.0016 36.1 12.1 128 27-164 252-398 (754)
239 3u64_A Protein TP_0956; tetrat 63.2 43 0.0015 31.9 10.1 110 101-213 154-283 (301)
240 3ix7_A Uncharacterized protein 61.7 8.9 0.0003 32.0 4.5 52 378-429 62-116 (134)
241 2y69_E Cytochrome C oxidase su 61.4 23 0.00079 29.6 6.8 47 119-166 71-117 (152)
242 1wdy_A 2-5A-dependent ribonucl 61.1 9.1 0.00031 35.0 5.1 117 27-170 6-131 (285)
243 3aji_A 26S proteasome non-ATPa 59.6 7.1 0.00024 34.8 3.9 150 28-205 8-165 (231)
244 2p58_C Putative type III secre 59.0 38 0.0013 26.7 7.2 47 149-201 52-98 (116)
245 3eiq_C Programmed cell death p 56.6 1E+02 0.0035 30.1 11.9 81 138-219 218-300 (358)
246 2uwj_G Type III export protein 56.3 36 0.0012 26.8 6.7 47 149-201 51-97 (115)
247 2v5f_A Prolyl 4-hydroxylase su 55.6 66 0.0023 24.5 10.2 71 138-210 6-82 (104)
248 2y69_E Cytochrome C oxidase su 55.4 72 0.0025 26.7 8.7 80 21-109 49-130 (152)
249 2nsz_A Programmed cell death p 53.9 41 0.0014 27.6 7.4 24 104-127 10-33 (129)
250 3bee_A Putative YFRE protein; 53.1 71 0.0024 24.1 9.7 65 99-166 4-72 (93)
251 2dzn_A Probable 26S proteasome 52.5 9.1 0.00031 33.9 3.4 138 29-189 5-154 (228)
252 3twr_A Tankyrase-2; ankyrin re 50.7 17 0.00057 30.3 4.7 19 28-46 10-28 (165)
253 3bee_A Putative YFRE protein; 50.4 79 0.0027 23.8 11.1 66 136-202 5-73 (93)
254 1bd8_A P19INK4D CDK4/6 inhibit 47.1 10 0.00035 31.4 2.6 145 27-195 3-153 (156)
255 4h7y_A Dual specificity protei 46.8 27 0.00092 29.9 5.0 33 24-57 14-52 (161)
256 3v31_A Ankyrin repeat family A 46.7 39 0.0013 28.0 6.4 150 30-200 7-160 (167)
257 2rfa_A Transient receptor pote 45.4 33 0.0011 30.2 6.0 151 28-197 39-219 (232)
258 2ion_A PDCD4, programmed cell 43.0 45 0.0015 28.3 6.0 65 103-169 11-77 (152)
259 1nzn_A CGI-135 protein, fissio 42.9 66 0.0022 26.4 6.8 100 29-137 7-107 (126)
260 3ljn_A Hypothetical protein; a 41.4 31 0.0011 33.1 5.5 149 24-196 18-194 (364)
261 3hra_A Ankyrin repeat family p 38.1 35 0.0012 29.2 4.8 144 28-191 41-194 (201)
262 3v30_A DNA-binding protein rfx 36.1 24 0.00083 29.5 3.4 146 30-198 6-158 (172)
263 2zu6_B Programmed cell death p 35.9 2.9E+02 0.0098 26.2 11.5 79 139-218 168-248 (307)
264 3f6q_A Integrin-linked protein 34.8 47 0.0016 28.0 5.0 16 32-47 11-26 (179)
265 4g8k_A 2-5A-dependent ribonucl 34.0 76 0.0026 29.8 6.9 150 30-207 172-329 (337)
266 1awc_B Protein (GA binding pro 33.9 69 0.0024 26.0 5.9 115 26-160 2-120 (153)
267 4b4t_R RPN7, 26S proteasome re 33.7 1.9E+02 0.0064 28.7 10.1 103 103-206 133-242 (429)
268 2d2s_A Exocyst complex compone 32.8 2.6E+02 0.0089 25.3 10.0 91 107-201 24-120 (235)
269 1wdy_A 2-5A-dependent ribonucl 32.8 30 0.001 31.3 3.6 105 86-195 118-239 (285)
270 2ion_A PDCD4, programmed cell 32.2 2.2E+02 0.0077 23.8 8.9 79 139-218 11-91 (152)
271 2rfa_A Transient receptor pote 31.6 45 0.0016 29.3 4.6 152 28-205 5-184 (232)
272 1v96_A Hypothetical protein PH 30.9 26 0.00089 29.0 2.6 43 396-438 94-141 (149)
273 4b4t_R RPN7, 26S proteasome re 29.4 2.3E+02 0.008 28.0 9.9 98 77-177 142-248 (429)
274 2etb_A Transient receptor pote 29.1 8.8 0.0003 34.9 -0.8 120 28-161 4-157 (256)
275 2y1l_E Darpin-8.4; hydrolase-i 28.9 68 0.0023 26.6 5.0 120 25-170 13-139 (169)
276 2jab_A H10-2-G3; HER2, darpin, 28.7 72 0.0025 25.3 5.0 22 25-46 13-34 (136)
277 3kea_A K1L; tropism, ANK repea 28.2 1.3E+02 0.0044 27.6 7.3 144 28-197 33-183 (285)
278 3eu9_A Huntingtin-interacting 27.4 48 0.0016 29.0 3.9 109 86-205 22-135 (240)
279 1ug3_A EIF4GI, eukaryotic prot 26.2 1.5E+02 0.0051 28.5 7.5 68 25-100 13-80 (339)
280 3eu9_A Huntingtin-interacting 25.4 39 0.0013 29.6 2.9 17 30-46 13-29 (240)
281 2aja_A Ankyrin repeat family p 25.1 3.3E+02 0.011 26.3 9.9 91 99-196 124-220 (376)
282 4fe7_A Xylose operon regulator 24.6 1.3E+02 0.0046 29.3 7.0 83 340-423 124-217 (412)
283 2uwj_G Type III export protein 24.2 2.6E+02 0.009 22.0 7.3 78 81-167 21-98 (115)
284 2p58_C Putative type III secre 23.8 2.7E+02 0.0092 21.9 7.9 78 81-167 22-99 (116)
285 4gpm_A Engineered protein OR26 23.4 1.5E+02 0.0052 24.8 6.3 115 62-196 6-124 (169)
286 3utm_A Tankyrase-1; tankyrase, 22.8 73 0.0025 29.8 4.5 112 27-160 25-144 (351)
287 4fke_A Aminopeptidase N; zinc 22.7 6.9E+02 0.023 27.5 12.9 48 149-199 738-785 (909)
288 3b7b_A Euchromatic histone-lys 22.3 65 0.0022 28.3 3.8 151 28-205 13-170 (237)
289 1o4w_A PIN (PILT N-terminus) d 22.2 97 0.0033 25.6 4.6 28 389-418 91-118 (147)
290 2qq8_A TBC1 domain family memb 21.9 95 0.0033 29.8 5.1 114 38-165 169-294 (334)
291 4fhn_B Nucleoporin NUP120; pro 21.9 5.1E+02 0.017 29.3 11.9 112 32-155 851-989 (1139)
292 3b7b_A Euchromatic histone-lys 21.4 32 0.0011 30.5 1.4 136 28-190 46-192 (237)
293 1vm6_A DHPR, dihydrodipicolina 21.3 2.9E+02 0.01 24.9 7.8 67 316-405 53-119 (228)
294 3qi7_A Putative transcriptiona 21.2 1.1E+02 0.0037 30.1 5.3 85 340-425 141-241 (371)
295 2y1l_E Darpin-8.4; hydrolase-i 20.5 1.5E+02 0.0051 24.4 5.6 124 55-205 9-139 (169)
296 2d2s_A Exocyst complex compone 20.4 3E+02 0.01 24.9 7.9 80 81-164 33-118 (235)
No 1
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=100.00 E-value=2e-109 Score=881.42 Aligned_cols=485 Identities=49% Similarity=0.891 Sum_probs=444.4
Q ss_pred CCCCCCCCccccccCCCCCHhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC-CCCCCChhhH
Q 010790 4 TTSTNPSKPNKKRKTNPNPETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA-TDPSSKDSAL 82 (501)
Q Consensus 4 ~~~~~~~~~~~~k~~~~~p~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~-~~~~~k~~~~ 82 (501)
.+.++..++.++|....+|+..++.+|++|+|.|++++|+++|++|.+.|++||.+|||+||++|++.+ .....+.+.+
T Consensus 7 s~~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~~~~~~~~l 86 (501)
T 4g26_A 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKGDVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAATESSPNPGL 86 (501)
T ss_dssp -----------------CHHHHHHHHHHHTTTSCCHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCSSSSCCHHH
T ss_pred chHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchhhhhhcchH
Confidence 456777788888888889999999999999999999999999999999999999999999999999876 3445677789
Q ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHH
Q 010790 83 RHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEH 162 (501)
Q Consensus 83 ~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~ 162 (501)
++|.++|++|...|+.||.+|||+||++|++.|++++|+++|++| ...|+.||.+|||+||.+||+.|++++|.++|++
T Consensus 87 ~~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M-~~~g~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~ 165 (501)
T 4g26_A 87 SRGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQM-KAFGIQPRLRSYGPALFGFCRKGDADKAYEVDAH 165 (501)
T ss_dssp HHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHH-HHcCCCCccceehHHHHHHHHCCCHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred HHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhcc---CcCCCcccchhhHHHHHHhc
Q 010790 163 MGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG---QKVNGVSCDLGLVKNAVLKN 239 (501)
Q Consensus 163 M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~---~~~~~~~~~~~~v~~~~~~~ 239 (501)
|.+.|+.||..||++||++|++.|+.++|+++|++|++.++.|+..|+.+|+.||.+ ...+...|+...+.+++...
T Consensus 166 M~~~G~~Pd~~ty~~Li~~~~~~g~~d~A~~ll~~Mr~~g~~ps~~T~~~l~~~F~s~~a~~~g~~~~d~~~~~~~~~~~ 245 (501)
T 4g26_A 166 MVESEVVPEEPELAALLKVSMDTKNADKVYKTLQRLRDLVRQVSKSTFDMIEEWFKSEVATKTGVKKWDVKKIRDAVVSG 245 (501)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTSSBCHHHHHHHHHHHHSHHHHTCCBSCCCHHHHHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHHHhhCCCHHHHHHHHHHHHHhCCCcCHHHHHHHHHHHhcCcchhhhhhhhhhhhhhhhHhcc
Confidence 999999999999999999999999999999999999999999999999999999943 45667789999999999999
Q ss_pred CCcccCCccccCCceEEEEeeecCCCCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhhhHHhhHHHHHHHHHHcCCccE
Q 010790 240 GGGWHGLGWIGQGKWVVKRGSVDESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEA 319 (501)
Q Consensus 240 g~~~~g~g~~~~~~w~v~~~~v~~~gkCg~~~~al~~~~l~~~e~~~~~~~i~~~a~~g~~~~~l~~F~~~l~~~~~~D~ 319 (501)
|++|||+||++.+.|.|..+.|+..|+|++|+..|+.++++++|+..|.+.|.++++.++..++|+.|++|+++++|||+
T Consensus 246 g~~~~~~~~~~~~~w~v~~t~v~~~G~C~~c~~~L~~i~l~~~e~~~l~~~i~~~~~~~~~~~~~~~F~~~l~~~~p~d~ 325 (501)
T 4g26_A 246 GGGWHGQGWLGTGKWNVKRTEMDENGVCKCCKEKLVCIDINPVETETFAASLTRLACEREVKANFNQFQEWLERHGPFDA 325 (501)
T ss_dssp TSSCCCSCCCBCSCEEEEEECBCTTSBBTTTCCBCCCCCCCHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHTSCCCSE
T ss_pred CcccccccccccCceeEEeeecccCCCccchhhhhccccCCHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHhcCCchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEeCccccccccccCCCCcCchhHHHHHHHHHHhcC-CcceEEEecccccCC-CCCCcchHHHHHHHHhcCeEEeCCCCC
Q 010790 320 IVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSG-NKWPLVILHNKRLRS-LWENPSHRNLVEEWNEKGVLYMTPHGS 397 (501)
Q Consensus 320 v~Dg~Nv~~~~~~~~~~~~~~~~i~~vv~~~~~~~~-~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~t~~~~ 397 (501)
||||+||||++|+ .|++.||+.|++.+++..+ ++.||||+|++|+.+ +...++++.+|++|++++.+|+||++|
T Consensus 326 vIDG~NV~~~~~~----~~~~~~l~~~~~~~~~~~~~~~~~lv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~s 401 (501)
T 4g26_A 326 VIDGANMGLVNQR----SFSFFQLNNTVQRCQQISPSKRLPLVILHKSRVNGGPATYPKNRALLEKWKNAGALYATPPGS 401 (501)
T ss_dssp EEEHHHHHHTTCS----SCCHHHHHHHHHHHHHHSTTCCCCEEEEEHHHHTSGGGSSHHHHHHHHHHHHTTCEEEECTTC
T ss_pred hhccchhhccccc----cccHHHHHHHHHHHHHHhhccCCcEEEeehhhhcccccCCHHHHHHHHHHHhcCeEEeCCCCC
Confidence 9999999999887 6899999999999988654 678999999999886 555678899999999999999999999
Q ss_pred CCcHHHHHHHHhcCceEEeccchhhhHhhhcCchhHHHhhhccEEEEEEec-CeeeeeCCCCccccccccCCCceeeccc
Q 010790 398 NDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQVHYTFVK-GNLKLQMPPPYSSVIQESEKGSWHVPIL 476 (501)
Q Consensus 398 ~DD~~~l~aa~~~~~~~vsnD~~Rdh~~~~~~~~~f~rW~~~hq~~~~~~~-~~~~~~~p~~~~~~~q~~~~~~wh~P~~ 476 (501)
+|||||||||++++|+|||||+||||+|+++++++|+|||++|||+|++.+ ++++|++|+||+++||++++++|||||.
T Consensus 402 ~DD~~~lyAal~~~~~~vsnD~mRdH~f~l~~~~~F~rW~~~hq~~~~~~~~~~~~~~~p~~~~~~~q~~~~~~WHiP~~ 481 (501)
T 4g26_A 402 NDDWYWLYAAVSCKCLLVTNDEMRDHLFQLLGNSFFPRWKEKHQVRISVTREDGLKLNMPPPYSIVIQESEDGTWHVPMS 481 (501)
T ss_dssp CHHHHHHHHHHHHTCEEECCCCCCSGGGGGGTTTHHHHHHHHHEEEEEEETTTEEEEECCCSSCCSCEECTTSCEEEEBC
T ss_pred CchHHHHHHHHccCCEEEeccccccchhccCCcHHHHHHHhcCeEEEEecCCCCceeccCCCCceeeeecCCCceEeccc
Confidence 999999999999999999999999999999999999999999999999874 5899999999999999998889999998
Q ss_pred cCCC--CCCceEEeecCCc
Q 010790 477 VKGN--SSQTWLCITRPNV 493 (501)
Q Consensus 477 ~~~~--~~~~wlC~~~~~~ 493 (501)
++++ .|++|||++|.+.
T Consensus 482 ~~~~~~~~~~WlC~~r~~~ 500 (501)
T 4g26_A 482 VEDDLQTSRQWLCAKRSKT 500 (501)
T ss_dssp CSCTTTSCCCEEEEEECC-
T ss_pred CCCCCCCCCeeEeeccCCC
Confidence 7765 8999999998753
No 2
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=99.95 E-value=5.9e-27 Score=248.28 Aligned_cols=173 Identities=16% Similarity=0.174 Sum_probs=148.5
Q ss_pred HHHHHHHHHHHhCCCCCCH-HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCC--
Q 010790 40 TTAISLYESAHSQNLRLSL-HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND-- 116 (501)
Q Consensus 40 ~~A~~lf~~m~~~gv~p~~-~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~-- 116 (501)
..+..++.+|.++++.+.+ ..++.+|.+|++.| ++++|+++|++|.+.|+.||.+|||+||.+|++.+.
T Consensus 7 s~~e~L~~~~~~k~~~~spe~~l~~~id~c~k~G--------~~~~A~~lf~~M~~~Gv~pd~~tyn~Li~~c~~~~~~~ 78 (501)
T 4g26_A 7 SPSENLSRKAKKKAIQQSPEALLKQKLDMCSKKG--------DVLEALRLYDEARRNGVQLSQYHYNVLLYVCSLAEAAT 78 (501)
T ss_dssp -----------------CHHHHHHHHHHHTTTSC--------CHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHTTCCCCS
T ss_pred chHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHcCCCCCHhHHHHHHHHHHhCCchh
Confidence 4566777888888886654 46899999999999 999999999999999999999999999999998765
Q ss_pred -------HHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChH
Q 010790 117 -------GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVE 189 (501)
Q Consensus 117 -------~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~ 189 (501)
++.|+++|++| ...|+.||.+|||+||.+|++.|++++|.++|++|...|+.||..|||+||.+|++.|+.+
T Consensus 79 ~~~~~~~l~~A~~lf~~M-~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~~g~~Pd~~tyn~lI~~~~~~g~~~ 157 (501)
T 4g26_A 79 ESSPNPGLSRGFDIFKQM-IVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKAFGIQPRLRSYGPALFGFCRKGDAD 157 (501)
T ss_dssp SSSCCHHHHHHHHHHHHH-HHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTTCHH
T ss_pred hhhhcchHHHHHHHHHHH-HHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCCCccceehHHHHHHHHCCCHH
Confidence 68899999999 9999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCHHHHHHHHHHhccCc
Q 010790 190 KVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221 (501)
Q Consensus 190 ~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~~~ 221 (501)
+|.++|++|.+.|+.|+..|+.+++..|...+
T Consensus 158 ~A~~l~~~M~~~G~~Pd~~ty~~Li~~~~~~g 189 (501)
T 4g26_A 158 KAYEVDAHMVESEVVPEEPELAALLKVSMDTK 189 (501)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCCCCHHHHHHHHHHHhhCC
Confidence 99999999999999999999999999996543
No 3
>3v33_A Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens}
Probab=99.93 E-value=1.2e-26 Score=212.74 Aligned_cols=139 Identities=21% Similarity=0.265 Sum_probs=116.6
Q ss_pred CCccEEEeCccccccccccCCCCcCchhHHHHHHHHHHhcCCcceEEEecccccCC--CCCCcchHHHHHHHHhcCeEEe
Q 010790 315 ANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRS--LWENPSHRNLVEEWNEKGVLYM 392 (501)
Q Consensus 315 ~~~D~v~Dg~Nv~~~~~~~~~~~~~~~~i~~vv~~~~~~~~~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 392 (501)
..--|||||+||||++++ ++.|++.+|..+|++|+++++ +.++|+++..+... +..+..++++|++|.+++.|++
T Consensus 23 ~lR~IVIDGsNVA~~~g~--~~~Fs~rgI~~aV~yF~~RGh-~~V~VfvP~~r~~~~~~~~~~~d~~~L~~L~k~g~L~~ 99 (223)
T 3v33_A 23 DLRPVVIDGSNVAMSHGN--KEVFSCRGILLAVNWFLERGH-TDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILVF 99 (223)
T ss_dssp CBCCEEEEHHHHHHHSSS--TTSEEHHHHHHHHHHHHTTTC-CCEEEEEEGGGGSCCCTTSCEESTHHHHHHHHTTCEEE
T ss_pred cCCeEEEeCHHHHhhhCC--CCCcCHHHHHHHHHHHHHcCC-CceEEEechhhhccccccCCCCcHHHHHHHHHCCCEEE
Confidence 456799999999999887 568999999999999999944 34777777766543 3445678999999999999999
Q ss_pred CCCC--------CCCcHHHHHHHHhcCceEEeccchhhhHhhhcCchhHHHhhhccEEEEEEecCeeeeeCCCCcc
Q 010790 393 TPHG--------SNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQVHYTFVKGNLKLQMPPPYS 460 (501)
Q Consensus 393 t~~~--------~~DD~~~l~aa~~~~~~~vsnD~~Rdh~~~~~~~~~f~rW~~~hq~~~~~~~~~~~~~~p~~~~ 460 (501)
||++ ++||+|||++|.+.+++|||||+||||.. ....|.+|.+.|+|.|+|.++.+. -.|.|+-
T Consensus 100 TPs~~v~G~r~~sydD~~iL~~A~~~~g~IVSND~yRD~~~---e~p~~k~~Ie~rlI~ytFv~D~Fm-ppdDplg 171 (223)
T 3v33_A 100 TPSRRVGGKRVVCYDDRFIVKLAYESDGIVVSNDTYRDLQG---ERQEWKRFIEERLLMYSFVNDKFM-PPDDPLG 171 (223)
T ss_dssp ECEEEETTEEEECCHHHHHHHHHHHTTCEEECSCCCHHHHT---TCHHHHHHHHHHEECCEEETTEEE-CCSSTTC
T ss_pred CCCCCcCCccccccchHHHHHHHHHcCCEEEeCccHHHHHh---hCHHHHHHHHhCeeeEEEECCEEe-CCCCccc
Confidence 9999 89999999999999999999999999986 567899999999999999865442 3344443
No 4
>3v32_B Ribonuclease ZC3H12A; rossmann-like sandwich fold, RNAse, cytoplastic, hydrolase; 2.00A {Homo sapiens} PDB: 3v34_A
Probab=99.93 E-value=3.2e-26 Score=205.60 Aligned_cols=140 Identities=21% Similarity=0.266 Sum_probs=116.6
Q ss_pred cCCccEEEeCccccccccccCCCCcCchhHHHHHHHHHHhcCCcceEEEecccccCC--CCCCcchHHHHHHHHhcCeEE
Q 010790 314 NANYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRS--LWENPSHRNLVEEWNEKGVLY 391 (501)
Q Consensus 314 ~~~~D~v~Dg~Nv~~~~~~~~~~~~~~~~i~~vv~~~~~~~~~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 391 (501)
....-|||||+||||++++ .+.|++++|..+|++|+++++ +.++|+++..+... +..+..++++|++|.+.+.|+
T Consensus 22 ~~lR~IVIDGsNVA~~~g~--~~~Fs~rgI~~aV~yf~~rGh-~~v~VfvP~~r~~~~~~~~~~~d~~~L~~L~~~g~l~ 98 (185)
T 3v32_B 22 SDLRPVVIDGSNVAMSHGN--KEVFSCRGILLAVNWFLERGH-TDITVFVPSWRKEQPRPDVPITDQHILRELEKKKILV 98 (185)
T ss_dssp -CBCCEEEEHHHHHHHHTT--TTSEEHHHHHHHHHHHHHTTC-CCEEEEEEGGGGSCCCTTSCEECTHHHHHHHHTTCEE
T ss_pred CCCCeEEEeCHHHHhhhCC--CCCcCHHHHHHHHHHHHHcCC-CceEEEechHhhhcccccCCCCCHHHHHHHHHCCCEE
Confidence 3466899999999999887 578999999999999999954 44667777666543 344567899999999999999
Q ss_pred eCCCC--------CCCcHHHHHHHHhcCceEEeccchhhhHhhhcCchhHHHhhhccEEEEEEecCeeeeeCCCCcc
Q 010790 392 MTPHG--------SNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLGSNFFLKWKERHQVHYTFVKGNLKLQMPPPYS 460 (501)
Q Consensus 392 ~t~~~--------~~DD~~~l~aa~~~~~~~vsnD~~Rdh~~~~~~~~~f~rW~~~hq~~~~~~~~~~~~~~p~~~~ 460 (501)
+||++ ++||+|||++|.+.+|+|||||+||||.. ....+.+|.+.|+|.|+|.++.+. -.|-|+-
T Consensus 99 ~TPs~~~~g~~~~~ydD~~il~~A~~~~g~IVSND~~rD~~~---~~p~~k~~Ie~rli~ytFv~d~Fm-p~~dplg 171 (185)
T 3v32_B 99 FTPSRRVGGKRVVCYDDRFIVKLAYESDGIVVSNDTYRDLQG---ERQEWKRFIEERLLMYSFVNDKFM-PPDDPLG 171 (185)
T ss_dssp EECCCC-------CCHHHHHHHHHHHTTCEEECSCCCHHHHH---HCHHHHHHHHHHEECCEEETTEEE-CCSSTTT
T ss_pred ECCCcccCCCcccCccHHHHHHHHHHcCCEEEeCccHHHHHh---hCHHHHHHHHhCcceeEEECCEEc-CCCCCCC
Confidence 99999 89999999999999999999999999987 456788899999999999866443 3444443
No 5
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.81 E-value=5.6e-20 Score=201.88 Aligned_cols=149 Identities=17% Similarity=0.161 Sum_probs=127.4
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHh---CCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc
Q 010790 55 RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS---NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF 131 (501)
Q Consensus 55 ~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~---~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~ 131 (501)
.--.+|||+||++|++.| ++++|.++|++|.+ .|+.||++|||+||.+||+.|++++|.++|++| +..
T Consensus 124 ~~~~~TynaLIdglcK~G--------~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G~~~eA~~Lf~eM-~~~ 194 (1134)
T 3spa_A 124 SGQQQRLLAFFKCCLLTD--------QLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQGAFKELVYVLFMV-KDA 194 (1134)
T ss_dssp CHHHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHT
T ss_pred HhHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCCCHHHHHHHHHHH-HHc
Confidence 334679999999999998 99999999998875 589999999999999999999999999999999 999
Q ss_pred CCCCChhhHHHHHHHHHHcCC-HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC----
Q 010790 132 NVVPRLRTYDPALFCFCENLE-AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN---- 206 (501)
Q Consensus 132 gi~P~~~ty~~lI~~~~~~g~-~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~---- 206 (501)
|+.||.+|||+||.++|+.|. .+.|.++|++|.++|+.||.++|+++|.++.+. .+++..+++ ..+..|+
T Consensus 195 G~~PDvvTYntLI~glcK~G~~~e~A~~Ll~EM~~kG~~PD~vtY~~ll~~~eR~----~vL~~Vrkv-~P~f~p~~~~~ 269 (1134)
T 3spa_A 195 GLTPDLLSYAAALQCMGRQDQDAGTIERCLEQMSQEGLKLQALFTAVLLSEEDRA----TVLKAVHKV-KPTFSLPPQLP 269 (1134)
T ss_dssp TCCCCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHTCCSHHHHHHSCCCHHHHH----HHHHHHGGG-CCCCCCCCCCC
T ss_pred CCCCcHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCCCChhhcccccChhhHH----HHHHHHHHh-CcccCCCCCCc
Confidence 999999999999999999997 588999999999999999999999999887764 455555555 4455554
Q ss_pred --HHHHHHHHHHh
Q 010790 207 --EETGKIIEDWF 217 (501)
Q Consensus 207 --~~t~~~i~~~f 217 (501)
..|...+...+
T Consensus 270 ~~~~t~~LL~dl~ 282 (1134)
T 3spa_A 270 PPVNTSKLLRDVY 282 (1134)
T ss_dssp CCCCCCTTTHHHH
T ss_pred ccccchHHHHHHH
Confidence 34445555555
No 6
>3spa_A Mtrpol, DNA-directed RNA polymerase, mitochondrial; single-subunit DNA-dependent RNA polymerase in mitochondria, transferase; 2.50A {Homo sapiens}
Probab=99.80 E-value=4.9e-20 Score=202.34 Aligned_cols=149 Identities=15% Similarity=0.110 Sum_probs=126.4
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHh---CCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHS---QNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~---~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
.+||+||++|||+|++++|.++|++|.+ .|+.||.+|||+||.+|++.| .+++|.++|++|.+.|+.||
T Consensus 128 ~TynaLIdglcK~G~leeA~~Lf~eM~~m~~kG~~PdvvTYNtLI~Glck~G--------~~~eA~~Lf~eM~~~G~~PD 199 (1134)
T 3spa_A 128 QRLLAFFKCCLLTDQLPLAHHLLVVHHGQRQKRKLLTLDMYNAVMLGWARQG--------AFKELVYVLFMVKDAGLTPD 199 (1134)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHSHHHHTTCCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHTTCCCC
T ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHHHHHhhcCCCCCHhHHHHHHHHHHhCC--------CHHHHHHHHHHHHHcCCCCc
Confidence 4899999999999999999999998874 589999999999999999988 89999999999999999999
Q ss_pred HHHHHHHHHHHHhCCCH-HHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC------HH
Q 010790 101 EASVTSVARLAASKNDG-DYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE------QQ 173 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~-~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd------~~ 173 (501)
++|||+||.++|+.|+. ++|.++|++| ...|+.||.+||+++|.++.+.+-++.+.++ ..++.|+ ..
T Consensus 200 vvTYntLI~glcK~G~~~e~A~~Ll~EM-~~kG~~PD~vtY~~ll~~~eR~~vL~~Vrkv-----~P~f~p~~~~~~~~~ 273 (1134)
T 3spa_A 200 LLSYAAALQCMGRQDQDAGTIERCLEQM-SQEGLKLQALFTAVLLSEEDRATVLKAVHKV-----KPTFSLPPQLPPPVN 273 (1134)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHH-HHHTCCSHHHHHHSCCCHHHHHHHHHHHGGG-----CCCCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHH-HHcCCCCChhhcccccChhhHHHHHHHHHHh-----CcccCCCCCCccccc
Confidence 99999999999999985 7899999999 9999999999999999988776444444333 3344443 44
Q ss_pred HHHHHHHHHHhcC
Q 010790 174 EIAALLKVSAETG 186 (501)
Q Consensus 174 t~~~Li~~~~~~g 186 (501)
+-..|.+.|.+.+
T Consensus 274 t~~LL~dl~s~d~ 286 (1134)
T 3spa_A 274 TSKLLRDVYAKDG 286 (1134)
T ss_dssp CCTTTHHHHCCCS
T ss_pred chHHHHHHHccCC
Confidence 4555556666544
No 7
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.61 E-value=1.4e-15 Score=163.02 Aligned_cols=265 Identities=9% Similarity=-0.078 Sum_probs=197.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|+.++..|.+.|++++|+.+|++|.. ..|+..++..+...|...+ ++++|..+|+.+.. ..++..+
T Consensus 85 ~~~~~~~~~~~~~g~~~~A~~~~~~~~~--~~p~~~~~~~l~~~~~~~g--------~~~~A~~~~~~~~~--~~~~~~~ 152 (597)
T 2xpi_A 85 DYLRLWRHDALMQQQYKCAAFVGEKVLD--ITGNPNDAFWLAQVYCCTG--------DYARAKCLLTKEDL--YNRSSAC 152 (597)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH--HHCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHTCG--GGTCHHH
T ss_pred HHHHHHHHHHHHccCchHHHHHHHHHHh--hCCCchHHHHHHHHHHHcC--------cHHHHHHHHHHHhc--cccchhH
Confidence 5899999999999999999999999984 5678899999999999988 89999999998854 3688999
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhc--------------CCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCC-
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEF--------------NVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL- 168 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~--------------gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv- 168 (501)
++.++.+|.+.|++++|..+|+++.... +..++..+|+.++.+|.+.|+.++|.++|++|...+.
T Consensus 153 ~~~l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~p~ 232 (597)
T 2xpi_A 153 RYLAAFCLVKLYDWQGALNLLGETNPFRKDEKNANKLLMQDGGIKLEASMCYLRGQVYTNLSNFDRAKECYKEALMVDAK 232 (597)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHCSSCTTC----------CCCSSCCHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHhhHHHHHHHHhccCCccccccccccccccccccchhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCch
Confidence 9999999999999999999999541332 3345688999999999999999999999999865431
Q ss_pred ---------------------------------------------------------------------CCCHHHHHHHH
Q 010790 169 ---------------------------------------------------------------------SLEQQEIAALL 179 (501)
Q Consensus 169 ---------------------------------------------------------------------~pd~~t~~~Li 179 (501)
.++..+|+.++
T Consensus 233 ~~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~l~ 312 (597)
T 2xpi_A 233 CYEAFDQLVSNHLLTADEEWDLVLKLNYSTYSKEDAAFLRSLYMLKLNKTSHEDELRRAEDYLSSINGLEKSSDLLLCKA 312 (597)
T ss_dssp CHHHHHHHHHTTCSCHHHHHHHHHHSCTHHHHGGGHHHHHHHHHTTSCTTTTHHHHHHHHHHHHTSTTGGGCHHHHHHHH
T ss_pred hhHHHHHHHHhhcccchhHHHHHHhcCCcccccchHHHHHHHHHHHHHHHcCcchHHHHHHHHHHhhcCCchHHHHHHHH
Confidence 26778888889
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccCcCCCcccchhhHHHHHHhcCCcccCCccccCCceEEEEe
Q 010790 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRG 259 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~~~~~~~~~~~~~v~~~~~~~g~~~~g~g~~~~~~w~v~~~ 259 (501)
.+|.+.|+.++|.++|++|...+- .+..++..+...+...+ . .-++..+.+.+..... ....+...
T Consensus 313 ~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g--~-~~~A~~~~~~~~~~~~----------~~~~~~~~ 378 (597)
T 2xpi_A 313 DTLFVRSRFIDVLAITTKILEIDP-YNLDVYPLHLASLHESG--E-KNKLYLISNDLVDRHP----------EKAVTWLA 378 (597)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHCT-TCCTTHHHHHHHHHHHT--C-HHHHHHHHHHHHHHCT----------TSHHHHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHcCc-ccHHHHHHHHHHHHHhC--C-HHHHHHHHHHHHhhCc----------ccHHHHHH
Confidence 999999999999999998876542 23444444444443221 0 0111111111111110 11112234
Q ss_pred eecCCCCCCCCCCcccccC----CCHHHHHHHHHHHHHHHHhhhHHhhHHHHHHHHHHc
Q 010790 260 SVDESGKCCSCGDQLACVD----IDDAETERFAQSVAALAMEREVKANFSEFQDWLEKN 314 (501)
Q Consensus 260 ~v~~~gkCg~~~~al~~~~----l~~~e~~~~~~~i~~~a~~g~~~~~l~~F~~~l~~~ 314 (501)
++..|.+||...+++..++ +.+.+...|..++..+...|+..++++.|+++++..
T Consensus 379 l~~~~~~~g~~~~A~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~ 437 (597)
T 2xpi_A 379 VGIYYLCVNKISEARRYFSKSSTMDPQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLF 437 (597)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhccHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 5567788888888887754 455667788888888889999999999999998754
No 8
>2xpi_A Anaphase-promoting complex subunit CUT9; cell cycle, TPR, ubiquitin ligase; 2.60A {Schizosaccharomyces pombe}
Probab=99.54 E-value=8e-13 Score=141.39 Aligned_cols=182 Identities=8% Similarity=-0.040 Sum_probs=138.3
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...|+.++.+|.+.|++++|+.+|++|.+.+. .+..+|+.++..+...+ +.++|.++|++|... .+.+..
T Consensus 305 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~~~~~-~~~~~~ 374 (597)
T 2xpi_A 305 SDLLLCKADTLFVRSRFIDVLAITTKILEIDP-YNLDVYPLHLASLHESG--------EKNKLYLISNDLVDR-HPEKAV 374 (597)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCCTTHHHHHHHHHHHT--------CHHHHHHHHHHHHHH-CTTSHH
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHHcCc-ccHHHHHHHHHHHHHhC--------CHHHHHHHHHHHHhh-CcccHH
Confidence 45899999999999999999999999986552 35677888888777776 788888888888753 244677
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
+|+.++.+|.+.|++++|.++|+++ .... +.+..+|+.++.+|++.|+.++|.++|++|...+ ..+..+|+.++.+|
T Consensus 375 ~~~~l~~~~~~~g~~~~A~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~ 451 (597)
T 2xpi_A 375 TWLAVGIYYLCVNKISEARRYFSKS-STMD-PQFGPAWIGFAHSFAIEGEHDQAISAYTTAARLF-QGTHLPYLFLGMQH 451 (597)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHTT-TTCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHH
Confidence 8888888888888888888888888 4421 1346788888888888888888888888887653 23677888888888
Q ss_pred HhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhc
Q 010790 183 AETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFS 218 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~ 218 (501)
.+.|+.++|.++|++|.+.. ..+..++..+...+.
T Consensus 452 ~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~ 486 (597)
T 2xpi_A 452 MQLGNILLANEYLQSSYALF-QYDPLLLNELGVVAF 486 (597)
T ss_dssp HHHTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHH
Confidence 88888888888888887642 224556666655553
No 9
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.99 E-value=1.3e-07 Score=96.75 Aligned_cols=179 Identities=10% Similarity=-0.011 Sum_probs=145.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+...|.+.|++++|+.+|+++.+.. +.+..+|..+...+...+ ++++|...|+++.+.+ +.+..+
T Consensus 27 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~ 96 (450)
T 2y4t_A 27 EKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRRATVFLAMG--------KSKAALPDLTKVIQLK-MDFTAA 96 (450)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhcC-CCcHHH
Confidence 478999999999999999999999998652 346788888888888888 8999999999998864 236889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh----hhHHHHHHH------------HHHcCCHHHHHHHHHHHHHCC
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----RTYDPALFC------------FCENLEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~------------~~~~g~~~~A~~lf~~M~~~g 167 (501)
+..+...|.+.|++++|...|+++ .. ..|+. .++..++.. |.+.|++++|..+|+.+....
T Consensus 97 ~~~l~~~~~~~g~~~~A~~~~~~~-~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 173 (450)
T 2y4t_A 97 RLQRGHLLLKQGKLDEAEDDFKKV-LK--SNPSENEEKEAQSQLIKSDEMQRLRSQALNAFGSGDYTAAIAFLDKILEVC 173 (450)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HT--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-Hh--cCCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC
Confidence 999999999999999999999999 44 33554 566655444 889999999999999998753
Q ss_pred CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Q 010790 168 LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 217 (501)
Q Consensus 168 v~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f 217 (501)
..+...+..+...|.+.|+.++|..+|+++.... ..+..++..+...+
T Consensus 174 -~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~ 221 (450)
T 2y4t_A 174 -VWDAELRELRAECFIKEGEPRKAISDLKAASKLK-NDNTEAFYKISTLY 221 (450)
T ss_dssp -TTCHHHHHHHHHHHHHTTCGGGGHHHHHHHHHHH-CSCHHHHHHHHHHH
T ss_pred -CCChHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 3377889999999999999999999999987652 22344444444444
No 10
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.97 E-value=4.2e-07 Score=91.42 Aligned_cols=163 Identities=12% Similarity=0.017 Sum_probs=90.6
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHH-HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLH-HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~-ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
..|..+...|.+.|++++|+..|+++.+.. |+.. .+..+-..+...+ ++++|.++|+++.+.. +-+..
T Consensus 102 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~ 170 (388)
T 1w3b_A 102 DGYINLAAALVAAGDMEGAVQAYVSALQYN--PDLYCVRSDLGNLLKALG--------RLEEAKACYLKAIETQ-PNFAV 170 (388)
T ss_dssp HHHHHHHHHHHHHSCSSHHHHHHHHHHHHC--TTCTHHHHHHHHHHHTTS--------CHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHHhC-CCCHH
Confidence 357777777777777777777777776542 4333 3333334555555 6777777777766542 22456
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
+|+.+...+...|++++|...|+++ .... +-+...|..+-..+...|++++|...|++..... +-+..+|..+...|
T Consensus 171 ~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~ 247 (388)
T 1w3b_A 171 AWSNLGCVFNAQGEIWLAIHHFEKA-VTLD-PNFLDAYINLGNVLKEARIFDRAVAAYLRALSLS-PNHAVVHGNLACVY 247 (388)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HhcC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cCCHHHHHHHHHHH
Confidence 6677777777777777777777666 3321 1123344444445555555555555554444321 11244455555555
Q ss_pred HhcCChHHHHHHHHHHHh
Q 010790 183 AETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~ 200 (501)
.+.|+.++|...|+++..
T Consensus 248 ~~~g~~~~A~~~~~~al~ 265 (388)
T 1w3b_A 248 YEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHh
Confidence 555555555555555444
No 11
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=98.89 E-value=3.3e-07 Score=93.83 Aligned_cols=167 Identities=11% Similarity=0.004 Sum_probs=131.5
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-H---HHHHHHHHH------------HHhCCCCCCCChhhHHHHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS-L---HHFNALLYL------------CSDSATDPSSKDSALRHGF 86 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~-~---~ty~~LL~~------------c~~~~~~~~~k~~~~~~a~ 86 (501)
...+..+...|.+.|++++|+.+|+++.+.. |+ . ..+..|... +...+ ++++|.
T Consensus 94 ~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~~--~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~--------~~~~A~ 163 (450)
T 2y4t_A 94 TAARLQRGHLLLKQGKLDEAEDDFKKVLKSN--PSENEEKEAQSQLIKSDEMQRLRSQALNAFGSG--------DYTAAI 163 (450)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT--------CHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC--CCChhhHHHHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH
Confidence 3477788888888888888888888887643 33 3 445544332 44444 899999
Q ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 87 ~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
.+|+++.+.. +.+..++..+..+|.+.|++++|..+|+++ ... -+.+..+|..+...|.+.|+.++|..+|+++...
T Consensus 164 ~~~~~~~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~-~~~-~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~~~~~ 240 (450)
T 2y4t_A 164 AFLDKILEVC-VWDAELRELRAECFIKEGEPRKAISDLKAA-SKL-KNDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 240 (450)
T ss_dssp HHHHHHHHHC-TTCHHHHHHHHHHHHHTTCGGGGHHHHHHH-HHH-HCSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCChHHHHHHHHHHHHCCCHHHHHHHHHHH-HHh-CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 9999998753 347889999999999999999999999998 443 2246789999999999999999999999999864
Q ss_pred CCCC-CHHHHHHH------------HHHHHhcCChHHHHHHHHHHHhCCCCCC
Q 010790 167 GLSL-EQQEIAAL------------LKVSAETGRVEKVYQYLQKLRSTVRCVN 206 (501)
Q Consensus 167 gv~p-d~~t~~~L------------i~~~~~~g~~~~a~~ll~~M~~~~~~p~ 206 (501)
.| +...+..+ ...|.+.|+.++|..+|+++... .|+
T Consensus 241 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~~--~p~ 289 (450)
T 2y4t_A 241 --DQDHKRCFAHYKQVKKLNKLIESAEELIRDGRYTDATSKYESVMKT--EPS 289 (450)
T ss_dssp --CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CCS
T ss_pred --CCChHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCc
Confidence 34 34455555 78899999999999999999874 454
No 12
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.89 E-value=8.5e-08 Score=93.73 Aligned_cols=160 Identities=11% Similarity=0.019 Sum_probs=120.6
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHH-HHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALL-YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL-~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
..+..+...+.+.++.++|++.|+++...++.|+...+..++ .++...| ++++|++.|+. ..+..
T Consensus 66 ~a~~~la~~~~~~~~~~~A~~~l~~ll~~~~~P~~~~~~~~la~~~~~~g--------~~~~Al~~l~~------~~~~~ 131 (291)
T 3mkr_A 66 QAVRMFAEYLASHSRRDAIVAELDREMSRSVDVTNTTFLLMAASIYFYDQ--------NPDAALRTLHQ------GDSLE 131 (291)
T ss_dssp HHHHHHHHHHHCSTTHHHHHHHHHHHHHSCCCCSCHHHHHHHHHHHHHTT--------CHHHHHHHHTT------CCSHH
T ss_pred HHHHHHHHHHcCCCcHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHCC--------CHHHHHHHHhC------CCCHH
Confidence 377888888888888999999999888877666555554444 3666766 78889988886 46778
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhH---HHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY---DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty---~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
++..+...|.+.|++++|...|+++ ... .|+...+ ..++..+...|+.++|..+|+++... .+.+...|+.+.
T Consensus 132 ~~~~l~~~~~~~g~~~~A~~~l~~~-~~~--~p~~~~~~l~~a~~~l~~~~~~~~eA~~~~~~~l~~-~p~~~~~~~~la 207 (291)
T 3mkr_A 132 CMAMTVQILLKLDRLDLARKELKKM-QDQ--DEDATLTQLATAWVSLAAGGEKLQDAYYIFQEMADK-CSPTLLLLNGQA 207 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHH-SCCCHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHH-Hhh--CcCcHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHh-CCCcHHHHHHHH
Confidence 8888888999999999999999888 443 2654211 12233344458889999999888876 345777888888
Q ss_pred HHHHhcCChHHHHHHHHHHHhC
Q 010790 180 KVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
.++.+.|++++|...|++....
T Consensus 208 ~~~~~~g~~~eA~~~l~~al~~ 229 (291)
T 3mkr_A 208 ACHMAQGRWEAAEGVLQEALDK 229 (291)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHh
Confidence 8899999999999999887654
No 13
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.87 E-value=2.1e-07 Score=87.44 Aligned_cols=166 Identities=10% Similarity=0.036 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+...|...|++++|+.+|+++.+.. +.+...+..+...+...+ ++++|.++|+++.... +.+..+
T Consensus 38 ~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~--------~~~~A~~~~~~a~~~~-~~~~~~ 107 (252)
T 2ho1_A 38 DAYIQLGLGYLQRGNTEQAKVPLRKALEID-PSSADAHAALAVVFQTEM--------EPKLADEEYRKALASD-SRNARV 107 (252)
T ss_dssp HHHHHHHHHHHHTTCTGGGHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHhcC-CChHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHC-cCcHHH
Confidence 467888889999999999999999988653 335677777777888877 8999999999988753 236788
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
+..+...|...|++++|.++|+++ ...+..| +...+..+...|.+.|+.++|...|++..... ..+...|..+...|
T Consensus 108 ~~~la~~~~~~g~~~~A~~~~~~~-~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~ 185 (252)
T 2ho1_A 108 LNNYGGFLYEQKRYEEAYQRLLEA-SQDTLYPERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLN-RNQPSVALEMADLL 185 (252)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-TTCTTCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-SCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH-HhCccCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cccHHHHHHHHHHH
Confidence 999999999999999999999999 5533445 45778888889999999999999999987754 23578899999999
Q ss_pred HhcCChHHHHHHHHHHHhC
Q 010790 183 AETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~ 201 (501)
.+.|+.++|..+|.+....
T Consensus 186 ~~~g~~~~A~~~~~~~~~~ 204 (252)
T 2ho1_A 186 YKEREYVPARQYYDLFAQG 204 (252)
T ss_dssp HHTTCHHHHHHHHHHHHTT
T ss_pred HHcCCHHHHHHHHHHHHHh
Confidence 9999999999999998764
No 14
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.87 E-value=7.6e-07 Score=81.34 Aligned_cols=166 Identities=10% Similarity=-0.008 Sum_probs=139.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+...|.+.|++++|+.+|+++.+.. +.+...|..+...+...+ +.++|.++|+...... +.+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~-~~~~~~ 78 (225)
T 2vq2_A 9 NIKTQLAMEYMRGQDYRQATASIEDALKSD-PKNELAWLVRAEIYQYLK--------VNDKAQESFRQALSIK-PDSAEI 78 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHcC--------ChHHHHHHHHHHHHhC-CCChHH
Confidence 478888999999999999999999988653 234677777777888877 8999999999988753 346788
Q ss_pred HHHHHHHHHhC-CCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 104 VTSVARLAASK-NDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 104 ~~~li~~~~~~-g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
+..+...|... |++++|...++++ ...+..|+ ...+..+...|.+.|+.++|...|+++.... ..+...|..+...
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~ 156 (225)
T 2vq2_A 79 NNNYGWFLCGRLNRPAESMAYFDKA-LADPTYPTPYIANLNKGICSAKQGQFGLAEAYLKRSLAAQ-PQFPPAFKELART 156 (225)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHH-HTSTTCSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHH-HcCcCCcchHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCchHHHHHHHH
Confidence 99999999999 9999999999999 55333343 5778888899999999999999999987753 2257889999999
Q ss_pred HHhcCChHHHHHHHHHHHhC
Q 010790 182 SAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~~ 201 (501)
+.+.|+.++|..++++....
T Consensus 157 ~~~~~~~~~A~~~~~~~~~~ 176 (225)
T 2vq2_A 157 KMLAGQLGDADYYFKKYQSR 176 (225)
T ss_dssp HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999998765
No 15
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=98.85 E-value=7.5e-07 Score=89.60 Aligned_cols=164 Identities=12% Similarity=-0.015 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+-..+.+.|+.++|...++...+.. +.+..+|..+...+...+ ++++|.+.|+++.+.. +.+..+
T Consensus 34 ~~~~~l~~~~~~~~~~~~a~~~~~~a~~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~ 103 (388)
T 1w3b_A 34 GVLLLLSSIHFQCRRLDRSAHFSTLAIKQN-PLLAEAYSNLGNVYKERG--------QLQEAIEHYRHALRLK-PDFIDG 103 (388)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCchHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHcC-cchHHH
Confidence 355666677788888888888887776542 446677888877777776 7888888888887642 224556
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh-hHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR-TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~-ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
|..+..++.+.|++++|...|.++ ... .|+.. .+..+-..|...|+.++|.++|+++.... +-+..+|+.+...+
T Consensus 104 ~~~l~~~~~~~g~~~~A~~~~~~a-l~~--~p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~ 179 (388)
T 1w3b_A 104 YINLAAALVAAGDMEGAVQAYVSA-LQY--NPDLYCVRSDLGNLLKALGRLEEAKACYLKAIETQ-PNFAVAWSNLGCVF 179 (388)
T ss_dssp HHHHHHHHHHHSCSSHHHHHHHHH-HHH--CTTCTHHHHHHHHHHHTTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 888888888888888888888887 432 35554 44455556666788888888888877653 22467788888888
Q ss_pred HhcCChHHHHHHHHHHHhC
Q 010790 183 AETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~ 201 (501)
.+.|+.++|...|+++...
T Consensus 180 ~~~g~~~~A~~~~~~al~~ 198 (388)
T 1w3b_A 180 NAQGEIWLAIHHFEKAVTL 198 (388)
T ss_dssp HTTTCHHHHHHHHHHHHHH
T ss_pred HHcCCHHHHHHHHHHHHhc
Confidence 8888888888888887764
No 16
>2ho1_A Type 4 fimbrial biogenesis protein PILF; type IV pilus biogenesis, TPR, superhelix, protein binding; HET: MSE; 2.00A {Pseudomonas aeruginosa} PDB: 2fi7_A
Probab=98.85 E-value=8.6e-07 Score=83.10 Aligned_cols=173 Identities=7% Similarity=-0.009 Sum_probs=142.5
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCC-CH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP-NE 101 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p-d~ 101 (501)
...+..+...|.+.|++++|+.+|+++.+.. +.+...+..+...+...+ ++++|.++|+++...+..| +.
T Consensus 71 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~g--------~~~~A~~~~~~~~~~~~~~~~~ 141 (252)
T 2ho1_A 71 ADAHAALAVVFQTEMEPKLADEEYRKALASD-SRNARVLNNYGGFLYEQK--------RYEEAYQRLLEASQDTLYPERS 141 (252)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHTTCTTCTTHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHHh--------HHHHHHHHHHHHHhCccCcccH
Confidence 3577888899999999999999999988654 235677777777788777 8999999999998744445 56
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
..+..+...|...|++++|...|++. .... +.+...+..+...|.+.|+.++|..+|+.+.... ..+...+..+...
T Consensus 142 ~~~~~la~~~~~~g~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~ 218 (252)
T 2ho1_A 142 RVFENLGLVSLQMKKPAQAKEYFEKS-LRLN-RNQPSVALEMADLLYKEREYVPARQYYDLFAQGG-GQNARSLLLGIRL 218 (252)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-HhcC-cccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cCcHHHHHHHHHH
Confidence 77888999999999999999999998 4432 2357888999999999999999999999987653 3467788999999
Q ss_pred HHhcCChHHHHHHHHHHHhCCCCCCHHH
Q 010790 182 SAETGRVEKVYQYLQKLRSTVRCVNEET 209 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~~~~~p~~~t 209 (501)
+...|+.++|..+++++.+. .|+...
T Consensus 219 ~~~~g~~~~A~~~~~~~~~~--~p~~~~ 244 (252)
T 2ho1_A 219 AKVFEDRDTAASYGLQLKRL--YPGSLE 244 (252)
T ss_dssp HHHTTCHHHHHHHHHHHHHH--CTTSHH
T ss_pred HHHccCHHHHHHHHHHHHHH--CCCCHH
Confidence 99999999999999998765 454433
No 17
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=98.83 E-value=9.5e-07 Score=80.69 Aligned_cols=175 Identities=14% Similarity=0.042 Sum_probs=142.2
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC-CCCCCCChhhHHHHHHHHHHHHhCCCCCC-
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDS-ATDPSSKDSALRHGFRVFDQMLSNNVIPN- 100 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~-~~~~~~k~~~~~~a~~lf~~M~~~g~~pd- 100 (501)
...|..+...|.+.|+.++|+.+|+++.+.. +.+..++..+...+... + ++++|..+|+.+...+..|+
T Consensus 42 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~--------~~~~A~~~~~~~~~~~~~~~~ 112 (225)
T 2vq2_A 42 ELAWLVRAEIYQYLKVNDKAQESFRQALSIK-PDSAEINNNYGWFLCGRLN--------RPAESMAYFDKALADPTYPTP 112 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTC--------CHHHHHHHHHHHHTSTTCSCH
T ss_pred hHHHHHHHHHHHHcCChHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhcC--------cHHHHHHHHHHHHcCcCCcch
Confidence 4578888999999999999999999988653 23567777777778777 7 89999999999988433343
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
..++..+...+...|++++|...|+++ .... +.+...+..+...|.+.|+.++|..+|+......-..+...+..+..
T Consensus 113 ~~~~~~l~~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~ 190 (225)
T 2vq2_A 113 YIANLNKGICSAKQGQFGLAEAYLKRS-LAAQ-PQFPPAFKELARTKMLAGQLGDADYYFKKYQSRVEVLQADDLLLGWK 190 (225)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHCSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCCchHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHHHHHHHH
Confidence 678899999999999999999999998 4432 23478889999999999999999999999877543246778888888
Q ss_pred HHHhcCChHHHHHHHHHHHhCCCCCCHHHH
Q 010790 181 VSAETGRVEKVYQYLQKLRSTVRCVNEETG 210 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~ 210 (501)
.+...|+.++|..+++.+... .|+...+
T Consensus 191 ~~~~~~~~~~a~~~~~~~~~~--~p~~~~~ 218 (225)
T 2vq2_A 191 IAKALGNAQAAYEYEAQLQAN--FPYSEEL 218 (225)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH--CTTCHHH
T ss_pred HHHhcCcHHHHHHHHHHHHHh--CCCCHHH
Confidence 899999999999999998754 4555443
No 18
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.83 E-value=3e-09 Score=108.97 Aligned_cols=238 Identities=11% Similarity=0.011 Sum_probs=94.9
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
+..|..|..++.+.|++++|++.|.+. +|..+|..++..|...| ++++|+.+++...+. .++..
T Consensus 32 ~~vWs~La~A~l~~g~~~eAIdsfika------~D~~~y~~V~~~ae~~g--------~~EeAi~yl~~ark~--~~~~~ 95 (449)
T 1b89_A 32 PAVWSQLAKAQLQKGMVKEAIDSYIKA------DDPSSYMEVVQAANTSG--------NWEELVKYLQMARKK--ARESY 95 (449)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHcC------CCHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHh--Cccch
Confidence 359999999999999999999999653 57789999999888877 899999977766553 56678
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
+.+.++.+|++.|+++++.++++ .|+..+|+.+-..|...|.+++|..+|..+ ..|..|..++
T Consensus 96 i~~~Li~~Y~Klg~l~e~e~f~~--------~pn~~a~~~IGd~~~~~g~yeeA~~~Y~~a---------~n~~~LA~~L 158 (449)
T 1b89_A 96 VETELIFALAKTNRLAELEEFIN--------GPNNAHIQQVGDRCYDEKMYDAAKLLYNNV---------SNFGRLASTL 158 (449)
T ss_dssp -------------CHHHHTTTTT--------CC----------------CTTTHHHHHHHT---------TCHHHHHHHH
T ss_pred hHHHHHHHHHHhCCHHHHHHHHc--------CCcHHHHHHHHHHHHHcCCHHHHHHHHHHh---------hhHHHHHHHH
Confidence 89999999999999999887764 277789999999999999999999999987 2799999999
Q ss_pred HhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccCcCCCcccchhhHHHHHHhcCCcccCCccccCCceEEEEeeec
Q 010790 183 AETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQKVNGVSCDLGLVKNAVLKNGGGWHGLGWIGQGKWVVKRGSVD 262 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~~~~~~~~~~~~~v~~~~~~~g~~~~g~g~~~~~~w~v~~~~v~ 262 (501)
.+.|++++|.+.++++ .+..|+..+..+|-..+ ..+.+.
T Consensus 159 ~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~~~---------ef~lA~-------------------------- 197 (449)
T 1b89_A 159 VHLGEYQAAVDGARKA------NSTRTWKEVCFACVDGK---------EFRLAQ-------------------------- 197 (449)
T ss_dssp HTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHHTT---------CHHHHH--------------------------
T ss_pred HHhccHHHHHHHHHHc------CCchhHHHHHHHHHHcC---------cHHHHH--------------------------
Confidence 9999999999999998 36788888877774331 111121
Q ss_pred CCCCCCCCCCcccccCCCHHHHHHHHHHHHHHHHhhhHHhhHHHHHHHHHHcCCccEEEeCccccccccccCCCCcCchh
Q 010790 263 ESGKCCSCGDQLACVDIDDAETERFAQSVAALAMEREVKANFSEFQDWLEKNANYEAIVDGANIGLYQQNFTEGGFSVPQ 342 (501)
Q Consensus 263 ~~gkCg~~~~al~~~~l~~~e~~~~~~~i~~~a~~g~~~~~l~~F~~~l~~~~~~D~v~Dg~Nv~~~~~~~~~~~~~~~~ 342 (501)
.|+.. +...+++.. +++.-+...|.-.+++..|++-+.--..-..+..++-++|. ++...+
T Consensus 198 ------~~~l~---L~~~ad~l~---~lv~~Yek~G~~eEai~lLe~aL~le~ah~~~ftel~il~~-------ky~p~k 258 (449)
T 1b89_A 198 ------MCGLH---IVVHADELE---ELINYYQDRGYFEELITMLEAALGLERAHMGMFTELAILYS-------KFKPQK 258 (449)
T ss_dssp ------HTTTT---TTTCHHHHH---HHHHHHHHTTCHHHHHHHHHHHTTSTTCCHHHHHHHHHHHH-------TTCHHH
T ss_pred ------HHHHH---HHhCHhhHH---HHHHHHHHCCCHHHHHHHHHHHhCCcHHHHHHHHHHHHHHH-------hcCHHH
Confidence 12222 335666644 45556666677778888888766422222333344444443 344555
Q ss_pred HHHHHHHHHHh
Q 010790 343 LDAVVKKLYER 353 (501)
Q Consensus 343 i~~vv~~~~~~ 353 (501)
+.+-++.+.++
T Consensus 259 ~~ehl~~~~~~ 269 (449)
T 1b89_A 259 MREHLELFWSR 269 (449)
T ss_dssp HHHHHHHHSTT
T ss_pred HHHHHHHHHHH
Confidence 65555555544
No 19
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.75 E-value=1e-06 Score=77.57 Aligned_cols=165 Identities=13% Similarity=0.034 Sum_probs=137.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+...+.+.|++++|+..|+++.+.. +.+...+..+...+...+ ++++|.++|+++.+.. +.+..+
T Consensus 9 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~ 78 (186)
T 3as5_A 9 VYYRDKGISHAKAGRYSQAVMLLEQVYDAD-AFDVDVALHLGIAYVKTG--------AVDRGTELLERSLADA-PDNVKV 78 (186)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTT-SCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-ccChHHHHHHHHHHHHcC--------CHHHHHHHHHHHHhcC-CCCHHH
Confidence 367788888999999999999999877543 235677777777777777 8999999999987753 346788
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
+..+...+...|++++|...++++ ... .+.+...+..+...|.+.|+.++|..+|++..... ..+...|..+...+.
T Consensus 79 ~~~~a~~~~~~~~~~~A~~~~~~~-~~~-~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~ 155 (186)
T 3as5_A 79 ATVLGLTYVQVQKYDLAVPLLIKV-AEA-NPINFNVRFRLGVALDNLGRFDEAIDSFKIALGLR-PNEGKVHRAIAFSYE 155 (186)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH-HHH-CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHH-Hhc-CcHhHHHHHHHHHHHHHcCcHHHHHHHHHHHHhcC-ccchHHHHHHHHHHH
Confidence 999999999999999999999998 443 23467788888899999999999999999987764 336788999999999
Q ss_pred hcCChHHHHHHHHHHHhC
Q 010790 184 ETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 184 ~~g~~~~a~~ll~~M~~~ 201 (501)
..|+.++|...+++....
T Consensus 156 ~~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 156 QMGRHEEALPHFKKANEL 173 (186)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHc
Confidence 999999999999987653
No 20
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.72 E-value=2.1e-06 Score=82.56 Aligned_cols=168 Identities=11% Similarity=0.050 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC-------CCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC-
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ-------NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN- 95 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~-------gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~- 95 (501)
..+..+...|...|++++|+.+|+++.+. ..+.....+..+-..+...+ ++++|..+|++....
T Consensus 28 ~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~~~~~~al~~~ 99 (311)
T 3nf1_A 28 RTLHNLVIQYASQGRYEVAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN--------KYKDAANLLNDALAIR 99 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHH
Confidence 37889999999999999999999998863 22223445666666777777 899999999988763
Q ss_pred -----CC-CCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc------CCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHH
Q 010790 96 -----NV-IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF------NVVP-RLRTYDPALFCFCENLEAEKAYEVEEH 162 (501)
Q Consensus 96 -----g~-~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~------gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~ 162 (501)
+- .....++..+...|...|++++|...|++. ... +-.| ...++..+-..|...|+.++|.++|++
T Consensus 100 ~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~ 178 (311)
T 3nf1_A 100 EKTLGKDHPAVAATLNNLAVLYGKRGKYKEAEPLCKRA-LEIREKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQR 178 (311)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHH
T ss_pred HHHhCCCChHHHHHHHHHHHHHHHcCcHHHHHHHHHHH-HHHHHHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 22 234667889999999999999999999988 432 2222 346778888899999999999999999
Q ss_pred HHHC------CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 163 MGLM------GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 163 M~~~------gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
.... +-.| ...++..+...|...|+.++|..+|++...
T Consensus 179 a~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 223 (311)
T 3nf1_A 179 ALEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKEILT 223 (311)
T ss_dssp HHHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 8764 2223 345788899999999999999999998865
No 21
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.72 E-value=2.1e-06 Score=79.57 Aligned_cols=164 Identities=9% Similarity=0.015 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..+.+.|++++|+.+|+++.+.. +.+...+..+...+...+ ++++|.+.|++..... +.+..++
T Consensus 25 ~~~~~a~~~~~~~~~~~A~~~~~~~l~~~-~~~~~~~~~la~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~~ 94 (243)
T 2q7f_A 25 TGGQQMGRGSEFGDYEKAAEAFTKAIEEN-KEDAIPYINFANLLSSVN--------ELERALAFYDKALELD-SSAATAY 94 (243)
T ss_dssp -----------------CCTTHHHHHTTC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHhhCHHHHHHHHHHHHHhC-cccHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHcC-CcchHHH
Confidence 45555555556666666666666655422 123444444444555554 5666666666555432 1245555
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~ 184 (501)
..+...|...|++++|...++++ .... +.+...+..+...|.+.|+.++|..+++++.... ..+...|..+...+.+
T Consensus 95 ~~la~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 171 (243)
T 2q7f_A 95 YGAGNVYVVKEMYKEAKDMFEKA-LRAG-MENGDLFYMLGTVLVKLEQPKLALPYLQRAVELN-ENDTEARFQFGMCLAN 171 (243)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHHT-CCSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHH
Confidence 55666666666666666666655 3221 1244455555555666666666666665554432 1244555555566666
Q ss_pred cCChHHHHHHHHHHHhC
Q 010790 185 TGRVEKVYQYLQKLRST 201 (501)
Q Consensus 185 ~g~~~~a~~ll~~M~~~ 201 (501)
.|+.++|...|.+....
T Consensus 172 ~~~~~~A~~~~~~~~~~ 188 (243)
T 2q7f_A 172 EGMLDEALSQFAAVTEQ 188 (243)
T ss_dssp HTCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHh
Confidence 66666666666555443
No 22
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.70 E-value=1.3e-06 Score=86.91 Aligned_cols=179 Identities=10% Similarity=-0.024 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+-..+.+.|++++|+.+|+++.+.. +.+..+|..+-..+...+ ++++|...|++..... +.+..+
T Consensus 66 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~ 135 (365)
T 4eqf_A 66 PGAFEEGLKRLKEGDLPVTILFMEAAILQD-PGDAEAWQFLGITQAENE--------NEQAAIVALQRCLELQ-PNNLKA 135 (365)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred hHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-cCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhcC-CCCHHH
Confidence 358888999999999999999999998754 345778888888888888 8999999999988753 346889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-----------hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CC
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-----------LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS-LE 171 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-----------~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~-pd 171 (501)
+..+...|...|++++|...|+++ ... .|+ ...+..+...|.+.|++++|..+|+++....-. ++
T Consensus 136 ~~~l~~~~~~~g~~~~A~~~~~~a-l~~--~p~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~ 212 (365)
T 4eqf_A 136 LMALAVSYTNTSHQQDACEALKNW-IKQ--NPKYKYLVKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMID 212 (365)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHH--CHHHHCC-------------------CCHHHHHHHHHHHHHHHHSCSSCC
T ss_pred HHHHHHHHHccccHHHHHHHHHHH-HHh--CccchHHHhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccC
Confidence 999999999999999999999998 432 233 223344577889999999999999999876321 26
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC-HHHHHHHHHHh
Q 010790 172 QQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN-EETGKIIEDWF 217 (501)
Q Consensus 172 ~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~-~~t~~~i~~~f 217 (501)
...|..+...|.+.|+.++|...|++.... .|+ ..++..+...+
T Consensus 213 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~ 257 (365)
T 4eqf_A 213 PDLQTGLGVLFHLSGEFNRAIDAFNAALTV--RPEDYSLWNRLGATL 257 (365)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHH
Confidence 889999999999999999999999998765 333 44444444444
No 23
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.69 E-value=4e-06 Score=83.00 Aligned_cols=179 Identities=12% Similarity=0.047 Sum_probs=139.0
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+-..|.+.|++++|+.+|+++.+.. +.+...|..+-..+...+ ++++|.+.|+++.+.. +.+..+
T Consensus 65 ~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~-~~~~~~ 134 (368)
T 1fch_A 65 PQPFEEGLRRLQEGDLPNAVLLFEAAVQQD-PKHMEAWQYLGTTQAENE--------QELLAISALRRCLELK-PDNQTA 134 (368)
T ss_dssp SSHHHHHHHHHHTTCHHHHHHHHHHHHHSC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCc--------CHHHHHHHHHHHHhcC-CCCHHH
Confidence 467788889999999999999999998764 345677877777888887 8999999999988754 347889
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh-hhHHH---------------HHHHHHHcCCHHHHHHHHHHHHHCC
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL-RTYDP---------------ALFCFCENLEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~-~ty~~---------------lI~~~~~~g~~~~A~~lf~~M~~~g 167 (501)
+..+...|...|+.++|...|+++ .... |+. ..+.. .+..+...|+.++|..+|+.+....
T Consensus 135 ~~~l~~~~~~~g~~~~A~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~ 211 (368)
T 1fch_A 135 LMALAVSFTNESLQRQACEILRDW-LRYT--PAYAHLVTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLD 211 (368)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHTS--TTTGGGCC---------------CTTHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHhC--cCcHHHHHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhC
Confidence 999999999999999999999998 4432 332 22221 2445558999999999999998753
Q ss_pred CC-CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC-HHHHHHHHHHh
Q 010790 168 LS-LEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN-EETGKIIEDWF 217 (501)
Q Consensus 168 v~-pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~-~~t~~~i~~~f 217 (501)
-. ++..+|..+...|.+.|+.++|...|++.... .|+ ..++..+...+
T Consensus 212 p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~--~~~~~~~~~~l~~~~ 261 (368)
T 1fch_A 212 PTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV--RPNDYLLWNKLGATL 261 (368)
T ss_dssp TTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred cCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CcCCHHHHHHHHHHH
Confidence 22 25789999999999999999999999998765 343 33444444344
No 24
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=98.68 E-value=2.3e-06 Score=85.14 Aligned_cols=183 Identities=8% Similarity=-0.060 Sum_probs=126.2
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC----
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI---- 98 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~---- 98 (501)
...|..+...|.+.|++++|+..|+++.+.. +.+..+|..+...+...+ ++++|..+|+++.+....
T Consensus 99 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~p~~~~~ 169 (365)
T 4eqf_A 99 AEAWQFLGITQAENENEQAAIVALQRCLELQ-PNNLKALMALAVSYTNTS--------HQQDACEALKNWIKQNPKYKYL 169 (365)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCHHHHCC
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHccc--------cHHHHHHHHHHHHHhCccchHH
Confidence 3578899999999999999999999988753 235778888888888887 888899888888763211
Q ss_pred -----CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH
Q 010790 99 -----PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173 (501)
Q Consensus 99 -----pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~ 173 (501)
....++..+...+...|++++|..+|+++.....-.++..+|..+...|.+.|+.++|..+|++..... ..+..
T Consensus 170 ~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~ 248 (365)
T 4eqf_A 170 VKNKKGSPGLTRRMSKSPVDSSVLEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALTVR-PEDYS 248 (365)
T ss_dssp -------------------CCHHHHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHH
T ss_pred HhhhccchHHHHHHHHHHhhhhhHHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-CCCHH
Confidence 012334456778888888888888888883222111256788888888888888888888888877653 23577
Q ss_pred HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC-HHHHHHHHHHh
Q 010790 174 EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN-EETGKIIEDWF 217 (501)
Q Consensus 174 t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~-~~t~~~i~~~f 217 (501)
+|+.+...|.+.|+.++|...|++.... .|+ ..++..+...+
T Consensus 249 ~~~~l~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~l~~~~ 291 (365)
T 4eqf_A 249 LWNRLGATLANGDRSEEAVEAYTRALEI--QPGFIRSRYNLGISC 291 (365)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCCchHHHHHHHHHH
Confidence 8888888888888888888888887765 344 33444444444
No 25
>2q7f_A YRRB protein; TPR, protein binding; 2.49A {Bacillus subtilis} SCOP: k.38.1.1
Probab=98.67 E-value=7.1e-07 Score=82.82 Aligned_cols=166 Identities=11% Similarity=0.076 Sum_probs=139.7
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...+..+...|.+.|+.++|+..|+++.+.. +.+...+..+...+...+ ++++|.++|+++.+.. +.+..
T Consensus 57 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~ 126 (243)
T 2q7f_A 57 AIPYINFANLLSSVNELERALAFYDKALELD-SSAATAYYGAGNVYVVKE--------MYKEAKDMFEKALRAG-MENGD 126 (243)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHT-CCSHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHcC-CcchHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHhC-CCCHH
Confidence 3577888899999999999999999988653 235677777777787777 8999999999988753 34677
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
++..+...+...|++++|...++++ .... +.+...+..+...|.+.|+.++|..+|++..... ..+..+|..+...|
T Consensus 127 ~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~ 203 (243)
T 2q7f_A 127 LFYMLGTVLVKLEQPKLALPYLQRA-VELN-ENDTEARFQFGMCLANEGMLDEALSQFAAVTEQD-PGHADAFYNAGVTY 203 (243)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHH-HHhC-CccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-cccHHHHHHHHHHH
Confidence 8999999999999999999999998 4432 2367888899999999999999999999987753 23577899999999
Q ss_pred HhcCChHHHHHHHHHHHhC
Q 010790 183 AETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~ 201 (501)
.+.|+.++|...|++..+.
T Consensus 204 ~~~~~~~~A~~~~~~~~~~ 222 (243)
T 2q7f_A 204 AYKENREKALEMLDKAIDI 222 (243)
T ss_dssp HHTTCTTHHHHHHHHHHHH
T ss_pred HHccCHHHHHHHHHHHHcc
Confidence 9999999999999998764
No 26
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.64 E-value=1.3e-06 Score=81.54 Aligned_cols=165 Identities=8% Similarity=-0.007 Sum_probs=114.5
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC--CCC-
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV--IPN- 100 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~--~pd- 100 (501)
..|..+-..|.+.|++++|+..|+++.+.. .+...|..+-..+...+ ++++|.+.|+...+... .++
T Consensus 6 ~~~~~~g~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~a~~~~~~~~~~~ 75 (258)
T 3uq3_A 6 DKEKAEGNKFYKARQFDEAIEHYNKAWELH--KDITYLNNRAAAEYEKG--------EYETAISTLNDAVEQGREMRADY 75 (258)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--CCTHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHhh--ccHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHHhCcccccch
Confidence 477888899999999999999999998777 67788888888888887 89999999999876321 122
Q ss_pred ---HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcC------------------------CCC-ChhhHHHHHHHHHHcCC
Q 010790 101 ---EASVTSVARLAASKNDGDYAFVLIKRMNNEFN------------------------VVP-RLRTYDPALFCFCENLE 152 (501)
Q Consensus 101 ---~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~g------------------------i~P-~~~ty~~lI~~~~~~g~ 152 (501)
..++..+...|...|++++|...|++. .... ..| +...|..+-..|...|+
T Consensus 76 ~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (258)
T 3uq3_A 76 KVISKSFARIGNAYHKLGDLKKTIEYYQKS-LTEHRTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSD 154 (258)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHcccHHHHHHHHHHH-HhcCchhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcC
Confidence 578999999999999999999999998 4421 111 12344444445555555
Q ss_pred HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 153 AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 153 ~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
.++|...|++..... ..+...|..+...|.+.|+.++|...|++...
T Consensus 155 ~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~ 201 (258)
T 3uq3_A 155 WPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIE 201 (258)
T ss_dssp HHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcC-cccHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 555555555554432 11344555555555555555555555555443
No 27
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=98.62 E-value=7e-06 Score=81.28 Aligned_cols=169 Identities=9% Similarity=-0.113 Sum_probs=120.3
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...|..+...|.+.|++++|+..|+++.+.. +.+..++..+...+...+ +.++|.+.|+.+..........
T Consensus 98 ~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~~~~~~~~~~~~ 168 (368)
T 1fch_A 98 MEAWQYLGTTQAENEQELLAISALRRCLELK-PDNQTALMALAVSFTNES--------LQRQACEILRDWLRYTPAYAHL 168 (368)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSTTTGGG
T ss_pred HHHHHHHHHHHHHCcCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCcCcHHH
Confidence 3578888999999999999999999988754 336778888877888877 7888999998887754321111
Q ss_pred HHHH--------------HHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCC
Q 010790 103 SVTS--------------VARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 103 t~~~--------------li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv 168 (501)
.... .+..+...|++++|...|+++.....-.++..++..+...|.+.|+.++|...|+++....
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~- 247 (368)
T 1fch_A 169 VTPAEEGAGGAGLGPSKRILGSLLSDSLFLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSVR- 247 (368)
T ss_dssp CC---------------CTTHHHHHHHHHHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHhhhhcccHHHHHHHHHhhcccHHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-
Confidence 1100 2333447788888888888872222111136777888888888888888888888876642
Q ss_pred CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 169 ~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..+...|..+...|.+.|+.++|...|++....
T Consensus 248 ~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 280 (368)
T 1fch_A 248 PNDYLLWNKLGATLANGNQSEEAVAAYRRALEL 280 (368)
T ss_dssp TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 224667888888888888888888888877654
No 28
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=98.61 E-value=4.7e-06 Score=81.23 Aligned_cols=164 Identities=15% Similarity=0.135 Sum_probs=129.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH-
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS- 103 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t- 103 (501)
.+..+-..|.+.|++++|+++|++ +.+...+..+...+.+.| +.++|.+.|+.+.+.. |+...
T Consensus 103 ~~~~la~~~~~~g~~~~Al~~l~~------~~~~~~~~~l~~~~~~~g--------~~~~A~~~l~~~~~~~--p~~~~~ 166 (291)
T 3mkr_A 103 FLLMAASIYFYDQNPDAALRTLHQ------GDSLECMAMTVQILLKLD--------RLDLARKELKKMQDQD--EDATLT 166 (291)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHTT------CCSHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC--TTCHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHhC------CCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhhC--cCcHHH
Confidence 455566889999999999999987 456778888888888888 8999999999998864 55321
Q ss_pred --HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 104 --VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 104 --~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
..+.+..+...|+.++|..+|+++ ... .+.+...|+.+-.+|.+.|++++|...|++..... +-+..+|..++..
T Consensus 167 ~l~~a~~~l~~~~~~~~eA~~~~~~~-l~~-~p~~~~~~~~la~~~~~~g~~~eA~~~l~~al~~~-p~~~~~l~~l~~~ 243 (291)
T 3mkr_A 167 QLATAWVSLAAGGEKLQDAYYIFQEM-ADK-CSPTLLLLNGQAACHMAQGRWEAAEGVLQEALDKD-SGHPETLINLVVL 243 (291)
T ss_dssp HHHHHHHHHHHCTTHHHHHHHHHHHH-HHH-SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHH-HHh-CCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Confidence 123445555679999999999999 443 44678889999999999999999999999987653 2367789999999
Q ss_pred HHhcCChHH-HHHHHHHHHhCCCCCCHHH
Q 010790 182 SAETGRVEK-VYQYLQKLRSTVRCVNEET 209 (501)
Q Consensus 182 ~~~~g~~~~-a~~ll~~M~~~~~~p~~~t 209 (501)
+...|+.++ +.++++++.+. .|+...
T Consensus 244 ~~~~g~~~eaa~~~~~~~~~~--~P~~~~ 270 (291)
T 3mkr_A 244 SQHLGKPPEVTNRYLSQLKDA--HRSHPF 270 (291)
T ss_dssp HHHTTCCHHHHHHHHHHHHHH--CTTCHH
T ss_pred HHHcCCCHHHHHHHHHHHHHh--CCCChH
Confidence 999999876 57888887654 455443
No 29
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.56 E-value=1.9e-05 Score=76.35 Aligned_cols=173 Identities=10% Similarity=-0.002 Sum_probs=131.5
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC-------------------------C-----
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA-------------------------T----- 73 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~-------------------------~----- 73 (501)
..+..+...|.+.|+.++|...|+++.+.. +.+..++..+...+...+ .
T Consensus 56 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 134 (327)
T 3cv0_A 56 EAWRSLGLTQAENEKDGLAIIALNHARMLD-PKDIAVHAALAVSHTNEHNANAALASLRAWLLSQPQYEQLGSVNLQADV 134 (327)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSTTTTTC---------
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-cCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCccHHHHHHHhHHHH
Confidence 356667777777888888888888776542 224455555555444443 0
Q ss_pred ---------C--CCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHH
Q 010790 74 ---------D--PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142 (501)
Q Consensus 74 ---------~--~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~ 142 (501)
. .+...|++++|.++|+++.+... .+..++..+...|...|++++|...++++ .... +.+..+|..
T Consensus 135 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~la~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~ 211 (327)
T 3cv0_A 135 DIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNP-NDAQLHASLGVLYNLSNNYDSAAANLRRA-VELR-PDDAQLWNK 211 (327)
T ss_dssp -----------CCTTSHHHHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHH
T ss_pred HHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCC-CCHHHHHHHHHHHHHhccHHHHHHHHHHH-HHhC-CCcHHHHHH
Confidence 1 25667788888888888876532 36788999999999999999999999998 4432 235688899
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 143 lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+...|...|+.++|...|++..... ..+...|..+...|.+.|+.++|...|++....
T Consensus 212 l~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 269 (327)
T 3cv0_A 212 LGATLANGNRPQEALDAYNRALDIN-PGYVRVMYNMAVSYSNMSQYDLAAKQLVRAIYM 269 (327)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 9999999999999999999987653 236788999999999999999999999988764
No 30
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=98.56 E-value=2e-05 Score=70.12 Aligned_cols=165 Identities=12% Similarity=0.049 Sum_probs=135.8
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+=..|.+.|++++|+..|++..+.. +-+...|..+-..+...+ ++++|...+........ -+...
T Consensus 6 ~iy~~lG~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~--------~~~~a~~~~~~~~~~~~-~~~~~ 75 (184)
T 3vtx_A 6 TIYMDIGDKKRTKGDFDGAIRAYKKVLKAD-PNNVETLLKLGKTYMDIG--------LPNDAIESLKKFVVLDT-TSAEA 75 (184)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCC-CCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhcCc-hhHHH
Confidence 478888899999999999999999988653 224667777777788887 89999999999876533 35677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
+..+...+...++.+.|...+.+. .... +-+...+..+-..|.+.|+.++|.+.|++..... +-+...|..+-..|.
T Consensus 76 ~~~~~~~~~~~~~~~~a~~~~~~a-~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~lg~~~~ 152 (184)
T 3vtx_A 76 YYILGSANFMIDEKQAAIDALQRA-IALN-TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISIK-PGFIRAYQSIGLAYE 152 (184)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHhC-ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHhc-chhhhHHHHHHHHHH
Confidence 888888999999999999999988 4432 2356778888889999999999999999987753 236778999999999
Q ss_pred hcCChHHHHHHHHHHHhC
Q 010790 184 ETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 184 ~~g~~~~a~~ll~~M~~~ 201 (501)
+.|+.++|++.|++..+.
T Consensus 153 ~~g~~~~A~~~~~~al~~ 170 (184)
T 3vtx_A 153 GKGLRDEAVKYFKKALEK 170 (184)
T ss_dssp HTTCHHHHHHHHHHHHHT
T ss_pred HCCCHHHHHHHHHHHHhC
Confidence 999999999999987653
No 31
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.55 E-value=9.5e-06 Score=84.02 Aligned_cols=178 Identities=8% Similarity=-0.123 Sum_probs=135.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|-.+-..|.+.|++++|+..|+++.+.. |+...|..+...+...+ ++++|...|+++.+.. +-+..++
T Consensus 8 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~la~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~~ 76 (514)
T 2gw1_A 8 ALKDKGNQFFRNKKYDDAIKYYNWALELK--EDPVFYSNLSACYVSVG--------DLKKVVEMSTKALELK-PDYSKVL 76 (514)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-SCCHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcC--ccHHHHHhHHHHHHHHh--------hHHHHHHHHHHHhccC-hHHHHHH
Confidence 56667788999999999999999999865 78889998888888887 8999999999998754 3467899
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh-----------------------------------------------
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----------------------------------------------- 137 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----------------------------------------------- 137 (501)
..+..+|...|++++|...|+++ ....- ++.
T Consensus 77 ~~l~~~~~~~g~~~~A~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 154 (514)
T 2gw1_A 77 LRRASANEGLGKFADAMFDLSVL-SLNGD-FNDASIEPMLERNLNKQAMSKLKEKFGDIDTATATPTELSTQPAKERKDK 154 (514)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHSSS-CCGGGTHHHHHHHHHHHHHHHHTTC-------------------------
T ss_pred HHHHHHHHHHhhHHHHHHHHHHH-HhcCC-CccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCChhhHHHhh
Confidence 99999999999999999999988 44321 111
Q ss_pred --------------------------------hhHHHHHHHHH---HcCCHHHHHHHHHHHHH-----CCCC--------
Q 010790 138 --------------------------------RTYDPALFCFC---ENLEAEKAYEVEEHMGL-----MGLS-------- 169 (501)
Q Consensus 138 --------------------------------~ty~~lI~~~~---~~g~~~~A~~lf~~M~~-----~gv~-------- 169 (501)
..+...-..+. +.|++++|..+|+++.. ..-.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (514)
T 2gw1_A 155 QENLPSVTSMASFFGIFKPELTFANYDESNEADKELMNGLSNLYKRSPESYDKADESFTKAARLFEEQLDKNNEDEKLKE 234 (514)
T ss_dssp --CCCCHHHHHHHHTTSCCCCCCSSCCSSCHHHHHHHHHHHHHSSCCTTHHHHHHHHHHHHHHHHHHHTTTSTTCHHHHH
T ss_pred ccCCchhHHHHHHHhhcCHHHHHHHhcCCcHHHHHHHHHHHHHHhhhhccHHHHHHHHHHHHHHhhhhhccCccccccCh
Confidence 11111112222 37999999999999987 3112
Q ss_pred CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Q 010790 170 LEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 217 (501)
Q Consensus 170 pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f 217 (501)
.+...|..+...+...|+.++|..+|.++.... |+..++..+...+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~--~~~~~~~~l~~~~ 280 (514)
T 2gw1_A 235 KLAISLEHTGIFKFLKNDPLGAHEDIKKAIELF--PRVNSYIYMALIM 280 (514)
T ss_dssp HHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHC--CCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhC--ccHHHHHHHHHHH
Confidence 235678888899999999999999999988764 4444444444444
No 32
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=98.53 E-value=5.3e-06 Score=77.34 Aligned_cols=168 Identities=13% Similarity=0.037 Sum_probs=135.2
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCC--CCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCC
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQN--LRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~g--v~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g 96 (501)
...|..+-..|.+.|+.++|+..|+++.+.. ..++ ...|..+-..+...+ ++++|...|++.....
T Consensus 38 ~~~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~ 109 (258)
T 3uq3_A 38 ITYLNNRAAAEYEKGEYETAISTLNDAVEQGREMRADYKVISKSFARIGNAYHKLG--------DLKKTIEYYQKSLTEH 109 (258)
T ss_dssp THHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccccchHHHHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHhcC
Confidence 4578888899999999999999999987543 2223 466767767777777 7889999988887632
Q ss_pred ------------------------CC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcC
Q 010790 97 ------------------------VI-PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL 151 (501)
Q Consensus 97 ------------------------~~-pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g 151 (501)
.. .+...+..+...+...|++++|...|++. .... +.+..+|..+-..|.+.|
T Consensus 110 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~l~~~~~~~~ 187 (258)
T 3uq3_A 110 RTADILTKLRNAEKELKKAEAEAYVNPEKAEEARLEGKEYFTKSDWPNAVKAYTEM-IKRA-PEDARGYSNRAAALAKLM 187 (258)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTT
T ss_pred chhHHHHHHhHHHHHHHHHHHHHHcCcchHHHHHHHHHHHHHhcCHHHHHHHHHHH-HhcC-cccHHHHHHHHHHHHHhC
Confidence 12 24567888899999999999999999998 4432 236788999999999999
Q ss_pred CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 152 EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 152 ~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+.++|...|+...... ..+...|..+...|.+.|+.++|...|++..+.
T Consensus 188 ~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~ 236 (258)
T 3uq3_A 188 SFPEAIADCNKAIEKD-PNFVRAYIRKATAQIAVKEYASALETLDAARTK 236 (258)
T ss_dssp CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHh
Confidence 9999999999988754 235788999999999999999999999987654
No 33
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.53 E-value=5.1e-06 Score=76.94 Aligned_cols=162 Identities=9% Similarity=-0.073 Sum_probs=118.8
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC-----------CCCCCCChhhHHHHHHHHHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDS-----------ATDPSSKDSALRHGFRVFDQM 92 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~-----------~~~~~~k~~~~~~a~~lf~~M 92 (501)
..|..+-..|.+.|+.++|+..|++..+.. +-+...+..+-..+... + ++++|...|++.
T Consensus 40 ~a~~~lg~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~lg~~~~~~~~~~~~~~~~~g--------~~~~A~~~~~~a 110 (217)
T 2pl2_A 40 EALYWLARTQLKLGLVNPALENGKTLVART-PRYLGGYMVLSEAYVALYRQAEDRERGKG--------YLEQALSVLKDA 110 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHHHTCSSHHHHHH--------HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHhhhhhhhhccccc--------CHHHHHHHHHHH
Confidence 467777788889999999999999887653 22455666665566555 5 899999999998
Q ss_pred HhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH
Q 010790 93 LSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQ 172 (501)
Q Consensus 93 ~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~ 172 (501)
.+... -+...+..+-..|...|++++|...|++. .+.. .+...+..+-..|...|+.++|...|+...... +-+.
T Consensus 111 l~~~P-~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~--~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~-P~~~ 185 (217)
T 2pl2_A 111 ERVNP-RYAPLHLQRGLVYALLGERDKAEASLKQA-LALE--DTPEIRSALAELYLSMGRLDEALAQYAKALEQA-PKDL 185 (217)
T ss_dssp HHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC--CCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCH
T ss_pred HHhCc-ccHHHHHHHHHHHHHcCChHHHHHHHHHH-Hhcc--cchHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCh
Confidence 77432 25778889999999999999999999998 5655 688889999999999999999999999987753 2266
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010790 173 QEIAALLKVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 173 ~t~~~Li~~~~~~g~~~~a~~ll~~M~ 199 (501)
..+..+...+.+.|+.++|...|++..
T Consensus 186 ~~~~~la~~~~~~g~~~~A~~~~~~~~ 212 (217)
T 2pl2_A 186 DLRVRYASALLLKGKAEEAARAAALEH 212 (217)
T ss_dssp HHHHHHHHHHTC---------------
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHh
Confidence 788899999999999999999887653
No 34
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.52 E-value=1.1e-05 Score=78.23 Aligned_cols=162 Identities=12% Similarity=-0.007 Sum_probs=71.4
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+...|.+.|++++|+..|+++.+..-. +...+..+-..+...+ ++++|.+.|++..... +.+..++
T Consensus 127 ~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~-~~~~~~~l~~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~~ 196 (330)
T 3hym_B 127 AWIAYGHSFAVESEHDQAMAAYFTAAQLMKG-CHLPMLYIGLEYGLTN--------NSKLAERFFSQALSIA-PEDPFVM 196 (330)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTT-CSHHHHHHHHHHHHTT--------CHHHHHHHHHHHHTTC-TTCHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhccc-cHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHHhC-CCChHHH
Confidence 3444444444445555555554444432211 1222333333333333 4555555555544432 1234445
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcC--------CCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFN--------VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA 176 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~g--------i~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~ 176 (501)
..+...+...|++++|...+++. .... ...+..+|..+-..|.+.|+.++|...|++..... ..+...|.
T Consensus 197 ~~l~~~~~~~~~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~~-~~~~~~~~ 274 (330)
T 3hym_B 197 HEVGVVAFQNGEWKTAEKWFLDA-LEKIKAIGNEVTVDKWEPLLNNLGHVCRKLKKYAEALDYHRQALVLI-PQNASTYS 274 (330)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHHHTTTSCSCTTTTCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCSHHHH
T ss_pred HHHHHHHHHcccHHHHHHHHHHH-HHHhhhccccccccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhhC-ccchHHHH
Confidence 55555555555555555555444 2110 01223344455555555555555555555544332 11334455
Q ss_pred HHHHHHHhcCChHHHHHHHHHH
Q 010790 177 ALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 177 ~Li~~~~~~g~~~~a~~ll~~M 198 (501)
.+...|.+.|+.++|.+.|++.
T Consensus 275 ~la~~~~~~g~~~~A~~~~~~a 296 (330)
T 3hym_B 275 AIGYIHSLMGNFENAVDYFHTA 296 (330)
T ss_dssp HHHHHHHHHTCHHHHHHHHHTT
T ss_pred HHHHHHHHhccHHHHHHHHHHH
Confidence 5555555555555555555544
No 35
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.52 E-value=5.6e-06 Score=68.39 Aligned_cols=129 Identities=12% Similarity=0.054 Sum_probs=72.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+...|.+.|++++|+.+|+++.+.. +.+...+..+...+...+ ++++|..+|+++...+ +.+..++
T Consensus 3 ~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~~ 72 (136)
T 2fo7_A 3 AWYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQG--------DYDEAIEYYQKALELD-PRSAEAW 72 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHC-CCchHHH
Confidence 35556666666677777777777665432 123445555544444444 5666666666665432 2244555
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
..+...+...|++++|..+++++ .... +.+..++..+...|.+.|+.++|...|+++..
T Consensus 73 ~~l~~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~ 131 (136)
T 2fo7_A 73 YNLGNAYYKQGDYDEAIEYYQKA-LELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALE 131 (136)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHH-HHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 66666666666666666666665 3321 12344555555555566666666666555543
No 36
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=98.52 E-value=1e-05 Score=78.35 Aligned_cols=163 Identities=11% Similarity=-0.004 Sum_probs=129.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|-.+-..+.+.|++++|+.+|+++.+.. +-+...+..+...+...+ ++++|...|+++.... +.+..++
T Consensus 23 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~-~~~~~~~ 92 (327)
T 3cv0_A 23 NPMEEGLSMLKLANLAEAALAFEAVCQAA-PEREEAWRSLGLTQAENE--------KDGLAIIALNHARMLD-PKDIAVH 92 (327)
T ss_dssp CHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHhcC-cCCHHHH
Confidence 56677788999999999999999988753 235677777777788877 8999999999988753 3467889
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHH--------------HH--HHHcCCHHHHHHHHHHHHHCCC
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPAL--------------FC--FCENLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI--------------~~--~~~~g~~~~A~~lf~~M~~~gv 168 (501)
..+...|...|++++|...++++ ... .|+.......+ .. +...|+.++|..+++++....-
T Consensus 93 ~~la~~~~~~~~~~~A~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~ 169 (327)
T 3cv0_A 93 AALAVSHTNEHNANAALASLRAW-LLS--QPQYEQLGSVNLQADVDIDDLNVQSEDFFFAAPNEYRECRTLLHAALEMNP 169 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHT--STTTTTC--------------------CCTTSHHHHHHHHHHHHHHHHHST
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH-HHh--CCccHHHHHHHhHHHHHHHHHHHHHHhHHHHHcccHHHHHHHHHHHHhhCC
Confidence 99999999999999999999998 443 24433322222 33 7788999999999999887642
Q ss_pred CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 169 ~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
.+...+..+...|...|+.++|...+.+....
T Consensus 170 -~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 201 (327)
T 3cv0_A 170 -NDAQLHASLGVLYNLSNNYDSAAANLRRAVEL 201 (327)
T ss_dssp -TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHHHHHHhccHHHHHHHHHHHHHh
Confidence 36789999999999999999999999998765
No 37
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=98.52 E-value=1.8e-05 Score=73.23 Aligned_cols=168 Identities=12% Similarity=0.010 Sum_probs=139.3
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+-..+.+.|++++|+..|++..+.. +-+...+..+-..+...+ ++++|...|++..+.. +-+...
T Consensus 6 ~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-P~~~~a 75 (217)
T 2pl2_A 6 QNPLRLGVQLYALGRYDAALTLFERALKEN-PQDPEALYWLARTQLKLG--------LVNPALENGKTLVART-PRYLGG 75 (217)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHTTS-SSCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-CCcHHH
Confidence 366777788999999999999999988653 235666776666777777 8999999999988753 235778
Q ss_pred HHHHHHHHHhC-----------CCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC
Q 010790 104 VTSVARLAASK-----------NDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE 171 (501)
Q Consensus 104 ~~~li~~~~~~-----------g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd 171 (501)
+..+-..+... |++++|...|++. ... .|+ ...|..+=..|...|+.++|...|++..+.. .+
T Consensus 76 ~~~lg~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a-l~~--~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~--~~ 150 (217)
T 2pl2_A 76 YMVLSEAYVALYRQAEDRERGKGYLEQALSVLKDA-ERV--NPRYAPLHLQRGLVYALLGERDKAEASLKQALALE--DT 150 (217)
T ss_dssp HHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--CC
T ss_pred HHHHHHHHHHhhhhhhhhcccccCHHHHHHHHHHH-HHh--CcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhcc--cc
Confidence 88999999999 9999999999998 432 354 5677788888999999999999999998887 68
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 172 QQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 172 ~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
...|..+-..|...|+.++|...|++..+. .|+..
T Consensus 151 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~--~P~~~ 185 (217)
T 2pl2_A 151 PEIRSALAELYLSMGRLDEALAQYAKALEQ--APKDL 185 (217)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--STTCH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCh
Confidence 899999999999999999999999998764 45443
No 38
>1b89_A Protein (clathrin heavy chain); triskelion, coated vesicles, endocytosis, SELF- assembly, alpha-alpha superhelix; 2.60A {Bos taurus} SCOP: a.118.1.3
Probab=98.47 E-value=4.2e-07 Score=93.12 Aligned_cols=134 Identities=10% Similarity=0.067 Sum_probs=39.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..++..+.+.|++++|+..+..+++ . .+++.+.+.|+.+|.+.| +++++.++++ .|+..+|
T Consensus 63 ~y~~V~~~ae~~g~~EeAi~yl~~ark-~-~~~~~i~~~Li~~Y~Klg--------~l~e~e~f~~-------~pn~~a~ 125 (449)
T 1b89_A 63 SYMEVVQAANTSGNWEELVKYLQMARK-K-ARESYVETELIFALAKTN--------RLAELEEFIN-------GPNNAHI 125 (449)
T ss_dssp --------------------------------------------------------CHHHHTTTTT-------CC-----
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHH-h-CccchhHHHHHHHHHHhC--------CHHHHHHHHc-------CCcHHHH
Confidence 666666666666666666664444333 2 233556666666666655 5555555543 2555566
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~ 184 (501)
+.+...|...|.+++|...|..+ ..|..+..++.+.|+++.|.+.+..+ .+..+|..++.+|+.
T Consensus 126 ~~IGd~~~~~g~yeeA~~~Y~~a----------~n~~~LA~~L~~Lg~yq~AVea~~KA------~~~~~Wk~v~~aCv~ 189 (449)
T 1b89_A 126 QQVGDRCYDEKMYDAAKLLYNNV----------SNFGRLASTLVHLGEYQAAVDGARKA------NSTRTWKEVCFACVD 189 (449)
T ss_dssp -----------CTTTHHHHHHHT----------TCHHHHHHHHHTTTCHHHHHHHHHHH------TCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHh----------hhHHHHHHHHHHhccHHHHHHHHHHc------CCchhHHHHHHHHHH
Confidence 66666666666666666666555 14555555555566665555555555 144555555555555
Q ss_pred cCChHHH
Q 010790 185 TGRVEKV 191 (501)
Q Consensus 185 ~g~~~~a 191 (501)
.|+++.|
T Consensus 190 ~~ef~lA 196 (449)
T 1b89_A 190 GKEFRLA 196 (449)
T ss_dssp TTCHHHH
T ss_pred cCcHHHH
Confidence 5555555
No 39
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=98.46 E-value=1.9e-05 Score=76.50 Aligned_cols=166 Identities=6% Similarity=-0.073 Sum_probs=127.4
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..++..+.+.|+.++|+.+|+++.+..- -+...|..+-..+...+ ...++|.+.|+....... .+..+
T Consensus 57 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~-------~~~~~A~~~~~~a~~~~~-~~~~~ 127 (330)
T 3hym_B 57 SCLPVHIGTLVELNKANELFYLSHKLVDLYP-SNPVSWFAVGCYYLMVG-------HKNEHARRYLSKATTLEK-TYGPA 127 (330)
T ss_dssp TTHHHHHHHHHHHTCHHHHHHHHHHHHHHCT-TSTHHHHHHHHHHHHSC-------SCHHHHHHHHHHHHTTCT-TCTHH
T ss_pred hhHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHhh-------hhHHHHHHHHHHHHHhCC-ccHHH
Confidence 4566777888899999999999999886432 23455666655554443 048889999999877542 35667
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
|..+...+...|++++|...|++. .... +.+..++..+-..|...|+.++|...|++..... ..+...|..+...|.
T Consensus 128 ~~~l~~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~ 204 (330)
T 3hym_B 128 WIAYGHSFAVESEHDQAMAAYFTA-AQLM-KGCHLPMLYIGLEYGLTNNSKLAERFFSQALSIA-PEDPFVMHEVGVVAF 204 (330)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH-HHHT-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHH-HHhc-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhC-CCChHHHHHHHHHHH
Confidence 889999999999999999999988 4432 2245677778888999999999999999987654 336788899999999
Q ss_pred hcCChHHHHHHHHHHHhC
Q 010790 184 ETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 184 ~~g~~~~a~~ll~~M~~~ 201 (501)
+.|+.++|...|++....
T Consensus 205 ~~~~~~~A~~~~~~a~~~ 222 (330)
T 3hym_B 205 QNGEWKTAEKWFLDALEK 222 (330)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HcccHHHHHHHHHHHHHH
Confidence 999999999999888663
No 40
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=98.45 E-value=9.1e-06 Score=67.09 Aligned_cols=130 Identities=10% Similarity=0.055 Sum_probs=106.8
Q ss_pred HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh
Q 010790 60 HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139 (501)
Q Consensus 60 ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t 139 (501)
.|..+...+...+ ++++|..+|+++.... +.+..++..+...+...|++++|..+|+++ .... +.+...
T Consensus 3 ~~~~l~~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~ 71 (136)
T 2fo7_A 3 AWYNLGNAYYKQG--------DYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKA-LELD-PRSAEA 71 (136)
T ss_dssp HHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHC-TTCHHH
T ss_pred HHHHHHHHHHHcC--------cHHHHHHHHHHHHHcC-CcchhHHHHHHHHHHHhcCHHHHHHHHHHH-HHHC-CCchHH
Confidence 3455555555666 7999999999988753 346778899999999999999999999998 5443 245678
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 140 y~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+..+...|...|+.++|..+|+++.... ..+...|..+...+.+.|+.++|...|.++...
T Consensus 72 ~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 132 (136)
T 2fo7_A 72 WYNLGNAYYKQGDYDEAIEYYQKALELD-PRSAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 132 (136)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHHccHHHHHHHHHHHHcc
Confidence 8889999999999999999999988754 236778999999999999999999999988654
No 41
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.44 E-value=4.2e-05 Score=74.66 Aligned_cols=165 Identities=9% Similarity=0.068 Sum_probs=126.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-H-HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS-L-HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~-~-~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
..|..+...+.+.|++++|..+|+++.+ +.|+ . ..|..+...+.+.+ .+++|..+|+...+... .+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~A~~~~~~al~--~~p~~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~a~~~~p-~~~ 168 (308)
T 2ond_A 100 LLYFAYADYEESRMKYEKVHSIYNRLLA--IEDIDPTLVYIQYMKFARRAE--------GIKSGRMIFKKAREDAR-TRH 168 (308)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHT--SSSSCTHHHHHHHHHHHHHHH--------CHHHHHHHHHHHHTSTT-CCT
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHh--ccccCccHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhcCC-CCH
Confidence 4788889999999999999999999887 3453 2 26777777666665 79999999999887542 334
Q ss_pred HHHHHHHHHHH-hCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCC-CCC--CHHHHHH
Q 010790 102 ASVTSVARLAA-SKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMG-LSL--EQQEIAA 177 (501)
Q Consensus 102 ~t~~~li~~~~-~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~g-v~p--d~~t~~~ 177 (501)
..|........ ..|+.++|..+|+...... +-+...|..++..+.+.|+.+.|..+|+...... +.| ....|..
T Consensus 169 ~~~~~~a~~~~~~~~~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~~~~~l~~~ 246 (308)
T 2ond_A 169 HVYVTAALMEYYCSKDKSVAFKIFELGLKKY--GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWAR 246 (308)
T ss_dssp HHHHHHHHHHHHTSCCHHHHHHHHHHHHHHH--TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGGGCHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC--CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHHHHHHHHHH
Confidence 44544444322 3699999999999883322 2256788888888999999999999999998863 555 4678999
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhC
Q 010790 178 LLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 178 Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
++....+.|+.++|..+++++.+.
T Consensus 247 ~~~~~~~~g~~~~a~~~~~~a~~~ 270 (308)
T 2ond_A 247 FLAFESNIGDLASILKVEKRRFTA 270 (308)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH
Confidence 999999999999999999888764
No 42
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=98.40 E-value=6.4e-06 Score=79.13 Aligned_cols=168 Identities=13% Similarity=0.063 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC------CCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC-
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ------NLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN- 95 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~------gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~- 95 (501)
..+..+-..|...|++++|+..|+++.+. +-.| ...++..+-..+...+ ++++|.+.|++....
T Consensus 70 ~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~a~~~~ 141 (311)
T 3nf1_A 70 TMLNILALVYRDQNKYKDAANLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG--------KYKEAEPLCKRALEIR 141 (311)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHTTT--------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHcC--------cHHHHHHHHHHHHHHH
Confidence 36788889999999999999999998754 2223 3455666666777777 899999999988763
Q ss_pred -----CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc------CCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHH
Q 010790 96 -----NVIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNEF------NVVP-RLRTYDPALFCFCENLEAEKAYEVEEH 162 (501)
Q Consensus 96 -----g~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~------gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~ 162 (501)
+..| ...++..+...|...|++++|.++|++. ... +-.| ...++..+-..|.+.|+.++|...|++
T Consensus 142 ~~~~~~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 220 (311)
T 3nf1_A 142 EKVLGKDHPDVAKQLNNLALLCQNQGKYEEVEYYYQRA-LEIYQTKLGPDDPNVAKTKNNLASCYLKQGKFKQAETLYKE 220 (311)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHHHHTSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHhcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHHHHHHhCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 2223 4567888999999999999999999988 443 2123 236788888999999999999999998
Q ss_pred HHHC------------------------------------------------CCCCCHHHHHHHHHHHHhcCChHHHHHH
Q 010790 163 MGLM------------------------------------------------GLSLEQQEIAALLKVSAETGRVEKVYQY 194 (501)
Q Consensus 163 M~~~------------------------------------------------gv~pd~~t~~~Li~~~~~~g~~~~a~~l 194 (501)
+... .-..+..+|..|...|.+.|+.++|.++
T Consensus 221 al~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 300 (311)
T 3nf1_A 221 ILTRAHEREFGSVDDENKPIWMHAEEREECKGKQKDGTSFGEYGGWYKACKVDSPTVTTTLKNLGALYRRQGKFEAAETL 300 (311)
T ss_dssp HHHHHHHHHHC------CCHHHHHHHHHHC-------CCSCCCC---------CHHHHHHHHHHHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHhcCchhhHHHHHHHHHHHhhcCCCCchHHHHHHHHHHHHHHCCCHHHHHHH
Confidence 8752 0112345788889999999999999999
Q ss_pred HHHHHh
Q 010790 195 LQKLRS 200 (501)
Q Consensus 195 l~~M~~ 200 (501)
|++..+
T Consensus 301 ~~~al~ 306 (311)
T 3nf1_A 301 EEAAMR 306 (311)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 987654
No 43
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.38 E-value=3.7e-06 Score=79.40 Aligned_cols=168 Identities=12% Similarity=0.060 Sum_probs=129.4
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC------CCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC-
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ------NLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN- 95 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~------gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~- 95 (501)
..+..+-..|...|++++|+..|+++.+. +-.| ...+|..+-..+...+ ++++|.+.|.+....
T Consensus 44 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~ 115 (283)
T 3edt_B 44 TMLNILALVYRDQNKYKEAAHLLNDALAIREKTLGKDHPAVAATLNNLAVLYGKRG--------KYKEAEPLCKRALEIR 115 (283)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHHHHHTTT--------CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHH
Confidence 37888999999999999999999998754 2223 3445666666777777 899999999987763
Q ss_pred -----C-CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc------CCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHH
Q 010790 96 -----N-VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF------NVVP-RLRTYDPALFCFCENLEAEKAYEVEEH 162 (501)
Q Consensus 96 -----g-~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~------gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~ 162 (501)
. ......++..+...|...|++++|...|++. ... .-.| ...++..+-..|.+.|+.++|..+|++
T Consensus 116 ~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~ 194 (283)
T 3edt_B 116 EKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRA-LEIYATRLGPDDPNVAKTKNNLASCYLKQGKYQDAETLYKE 194 (283)
T ss_dssp HHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHHHHHSCTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 1 1234677889999999999999999999988 443 1123 346788888999999999999999988
Q ss_pred HHHC------------------------------------------------CCCCCHHHHHHHHHHHHhcCChHHHHHH
Q 010790 163 MGLM------------------------------------------------GLSLEQQEIAALLKVSAETGRVEKVYQY 194 (501)
Q Consensus 163 M~~~------------------------------------------------gv~pd~~t~~~Li~~~~~~g~~~~a~~l 194 (501)
.... .......+|..|...|.+.|+.++|..+
T Consensus 195 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~ 274 (283)
T 3edt_B 195 ILTRAHEKEFGSVNGDNKPIWMHAEEREESKDKRRDSAPYGEYGSWYKACKVDSPTVNTTLRSLGALYRRQGKLEAAHTL 274 (283)
T ss_dssp HHHHHHHHHSSSCCSSCCCHHHHHHHHHHTTCCCCC------------CCCCCCHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHhcCCCcchhHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcCCHHHHHHH
Confidence 7653 0111234688888899999999999999
Q ss_pred HHHHHh
Q 010790 195 LQKLRS 200 (501)
Q Consensus 195 l~~M~~ 200 (501)
|++..+
T Consensus 275 ~~~al~ 280 (283)
T 3edt_B 275 EDCASR 280 (283)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 987654
No 44
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.36 E-value=0.00015 Score=68.77 Aligned_cols=156 Identities=13% Similarity=0.052 Sum_probs=101.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSD----SATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~----~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
.+..+-..|.+.|++++|+..|.+..+.+ +...+..|-..+.. .+ ++++|.+.|++..+.+ +
T Consensus 8 a~~~lg~~~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~--------~~~~A~~~~~~a~~~~---~ 73 (273)
T 1ouv_A 8 ELVGLGAKSYKEKDFTQAKKYFEKACDLK---ENSGCFNLGVLYYQGQGVEK--------NLKKAASFYAKACDLN---Y 73 (273)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCC--------CHHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCCCcCC--------CHHHHHHHHHHHHHCC---C
Confidence 44555566667777777777777766632 23444444445555 33 6777777777766654 5
Q ss_pred HHHHHHHHHHHHh----CCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCH
Q 010790 101 EASVTSVARLAAS----KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLSLEQ 172 (501)
Q Consensus 101 ~~t~~~li~~~~~----~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~pd~ 172 (501)
..++..+-..|.. .++.++|...|++. ...+ +...+..+-..|.. .++.++|...|+...+.+ +.
T Consensus 74 ~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a-~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~~---~~ 146 (273)
T 1ouv_A 74 SNGCHLLGNLYYSGQGVSQNTNKALQYYSKA-CDLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACDLN---DG 146 (273)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHHTT---CH
T ss_pred HHHHHHHHHHHhCCCCcccCHHHHHHHHHHH-HHcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHhcC---cH
Confidence 6666677777777 77777777777776 4443 55666666666666 777777777777766654 45
Q ss_pred HHHHHHHHHHHh----cCChHHHHHHHHHHHhC
Q 010790 173 QEIAALLKVSAE----TGRVEKVYQYLQKLRST 201 (501)
Q Consensus 173 ~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~ 201 (501)
..+..|-..|.. .++.++|+..|++..+.
T Consensus 147 ~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~~ 179 (273)
T 1ouv_A 147 DGCTILGSLYDAGRGTPKDLKKALASYDKACDL 179 (273)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHC
Confidence 566666666666 67777777777766655
No 45
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=98.34 E-value=0.00017 Score=68.42 Aligned_cols=160 Identities=11% Similarity=0.014 Sum_probs=135.2
Q ss_pred CHhHHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh----CCCCCCCChhhHHHHHHHHHHHH
Q 010790 22 PETNFLINLQSCTK----SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSD----SATDPSSKDSALRHGFRVFDQML 93 (501)
Q Consensus 22 p~~~~n~lI~~~~k----~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~----~~~~~~~k~~~~~~a~~lf~~M~ 93 (501)
+...+..+-..|.+ .++.++|+..|++..+.+ +...+..|-..+.. .+ +.++|+..|++..
T Consensus 37 ~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~---~~~a~~~lg~~~~~g~~~~~--------~~~~A~~~~~~a~ 105 (273)
T 1ouv_A 37 ENSGCFNLGVLYYQGQGVEKNLKKAASFYAKACDLN---YSNGCHLLGNLYYSGQGVSQ--------NTNKALQYYSKAC 105 (273)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCC--------CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHcCCCcCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHhCCCCccc--------CHHHHHHHHHHHH
Confidence 34566777788888 999999999999998887 56777777667777 55 8999999999998
Q ss_pred hCCCCCCHHHHHHHHHHHHh----CCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHH
Q 010790 94 SNNVIPNEASVTSVARLAAS----KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGL 165 (501)
Q Consensus 94 ~~g~~pd~~t~~~li~~~~~----~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~ 165 (501)
+.+ +..++..+-..|.. .++.++|...|++. .+.+ +...+..+-..|.. .++.++|...|+...+
T Consensus 106 ~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a-~~~~---~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 178 (273)
T 1ouv_A 106 DLK---YAEGCASLGGIYHDGKVVTRDFKKAVEYFTKA-CDLN---DGDGCTILGSLYDAGRGTPKDLKKALASYDKACD 178 (273)
T ss_dssp HTT---CHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHH
T ss_pred HcC---CccHHHHHHHHHHcCCCcccCHHHHHHHHHHH-HhcC---cHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Confidence 875 77889999999999 99999999999998 6654 56677777778887 8999999999999888
Q ss_pred CCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhCC
Q 010790 166 MGLSLEQQEIAALLKVSAE----TGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 166 ~gv~pd~~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~~ 202 (501)
.+ +...+..|-..|.. .++.++|+..|++..+.+
T Consensus 179 ~~---~~~a~~~lg~~~~~g~~~~~~~~~A~~~~~~a~~~~ 216 (273)
T 1ouv_A 179 LK---DSPGCFNAGNMYHHGEGATKNFKEALARYSKACELE 216 (273)
T ss_dssp TT---CHHHHHHHHHHHHHTCSSCCCHHHHHHHHHHHHHTT
T ss_pred CC---CHHHHHHHHHHHHcCCCCCccHHHHHHHHHHHHhCC
Confidence 74 56788889999999 999999999999987764
No 46
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.34 E-value=7.8e-05 Score=70.17 Aligned_cols=165 Identities=11% Similarity=-0.051 Sum_probs=127.3
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+...|.+.|++++|+..|+++.+.. +.+...|..+-..+...+ ++++|.+.|++..+.. +.+..+
T Consensus 44 ~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~ 113 (275)
T 1xnf_A 44 QLLYERGVLYDSLGLRALARNDFSQALAIR-PDMPEVFNYLGIYLTQAG--------NFDAAYEAFDSVLELD-PTYNYA 113 (275)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCTHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHhcC-ccccHH
Confidence 378888999999999999999999988753 235678888877888887 8999999999988753 235778
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCC----------------
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMG---------------- 167 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~g---------------- 167 (501)
+..+...|...|++++|...|+++ .. +.|+...+..++..+...|+.++|...++......
T Consensus 114 ~~~la~~~~~~g~~~~A~~~~~~a-~~--~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (275)
T 1xnf_A 114 HLNRGIALYYGGRDKLAQDDLLAF-YQ--DDPNDPFRSLWLYLAEQKLDEKQAKEVLKQHFEKSDKEQWGWNIVEFYLGN 190 (275)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HH--HCTTCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHSCCCSTHHHHHHHHTTS
T ss_pred HHHHHHHHHHhccHHHHHHHHHHH-HH--hCCCChHHHHHHHHHHHhcCHHHHHHHHHHHHhcCCcchHHHHHHHHHHHh
Confidence 999999999999999999999998 44 23666555566666667788888888886554321
Q ss_pred ---------------CCC-----CHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 168 ---------------LSL-----EQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 168 ---------------v~p-----d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..| +...|..+...|.+.|+.++|...|++....
T Consensus 191 ~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 244 (275)
T 1xnf_A 191 ISEQTLMERLKADATDNTSLAEHLSETNFYLGKYYLSLGDLDSATALFKLAVAN 244 (275)
T ss_dssp SCHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred cCHHHHHHHHHHHhcccccccccccHHHHHHHHHHHHcCCHHHHHHHHHHHHhC
Confidence 011 1356777788888888888888888887764
No 47
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.33 E-value=8.7e-05 Score=72.43 Aligned_cols=164 Identities=9% Similarity=-0.003 Sum_probs=117.3
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+-..+.+.|++++|+.+|+++.+.. +.+...+..+-..+...+ ++++|...|+.+.+.. +-+...
T Consensus 4 ~~~~~~~~~~~~~g~~~~A~~~~~~~l~~~-p~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~ 73 (359)
T 3ieg_A 4 EKHLELGKKLLAAGQLADALSQFHAAVDGD-PDNYIAYYRRATVFLAMG--------KSKAALPDLTKVIALK-MDFTAA 73 (359)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHhhC-cccHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHHhC-CCcchH
Confidence 356667777888888888888888877643 234556666666666666 7888888888877642 225677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC---C-hhhHHHH------------HHHHHHcCCHHHHHHHHHHHHHCC
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP---R-LRTYDPA------------LFCFCENLEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P---~-~~ty~~l------------I~~~~~~g~~~~A~~lf~~M~~~g 167 (501)
+..+...|...|++++|...|++. .. +.| + ...+..+ ...+...|+.++|.++|+.+....
T Consensus 74 ~~~l~~~~~~~~~~~~A~~~~~~~-~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~ 150 (359)
T 3ieg_A 74 RLQRGHLLLKQGKLDEAEDDFKKV-LK--SNPSEQEEKEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKILEVC 150 (359)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH-HT--SCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCChHHHHHHHHHH-Hh--cCCcccChHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC
Confidence 888888888888888888888888 33 335 2 2333333 366778888888888888877653
Q ss_pred CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 168 LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 168 v~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..+...|..+...+...|+.++|...+.+....
T Consensus 151 -~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 183 (359)
T 3ieg_A 151 -VWDAELRELRAECFIKEGEPRKAISDLKAASKL 183 (359)
T ss_dssp -TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred -CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 235677888888888888888888888887764
No 48
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=98.32 E-value=6.9e-05 Score=73.15 Aligned_cols=167 Identities=12% Similarity=-0.003 Sum_probs=135.3
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC--CC
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI--PN 100 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~--pd 100 (501)
...+..+-..|.+.|++++|+..|+++.+.. +-+...|..+-..+...+ ++++|...|+...+.... .+
T Consensus 37 ~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~~~~~~~~~~~~ 107 (359)
T 3ieg_A 37 YIAYYRRATVFLAMGKSKAALPDLTKVIALK-MDFTAARLQRGHLLLKQG--------KLDEAEDDFKKVLKSNPSEQEE 107 (359)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHTSCCCHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCcchHHHHHHHHHHHcC--------ChHHHHHHHHHHHhcCCcccCh
Confidence 3578888899999999999999999988653 224567777777777777 899999999999875320 13
Q ss_pred HHHHHHH------------HHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCC
Q 010790 101 EASVTSV------------ARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 101 ~~t~~~l------------i~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv 168 (501)
...+..+ ...+...|++++|..+++++ .... +.+...+..+-..|...|+.++|...++......
T Consensus 108 ~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~- 184 (359)
T 3ieg_A 108 KEAESQLVKADEMQRLRSQALDAFDGADYTAAITFLDKI-LEVC-VWDAELRELRAECFIKEGEPRKAISDLKAASKLK- 184 (359)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHH-HHhC-CCchHHHHHHHHHHHHCCCHHHHHHHHHHHHHhC-
Confidence 4444444 57889999999999999998 4432 2466888899999999999999999999998763
Q ss_pred CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 169 SLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 169 ~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..+...|..+...|...|+.++|...|++....
T Consensus 185 ~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 217 (359)
T 3ieg_A 185 SDNTEAFYKISTLYYQLGDHELSLSEVRECLKL 217 (359)
T ss_dssp SCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 347789999999999999999999999998764
No 49
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=98.31 E-value=4.1e-05 Score=79.18 Aligned_cols=180 Identities=10% Similarity=0.010 Sum_probs=127.8
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+...|.+.|++++|+..|+++.+..- .+...+..+...+...+ ++++|..+|+.+.... +.+..+
T Consensus 305 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~-~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~ 374 (514)
T 2gw1_A 305 SVYYHRGQMNFILQNYDQAGKDFDKAKELDP-ENIFPYIQLACLAYREN--------KFDDCETLFSEAKRKF-PEAPEV 374 (514)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHTCS-SCSHHHHHHHHHTTTTT--------CHHHHHHHHHHHHHHS-TTCSHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHhCh-hhHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHc-ccCHHH
Confidence 4677778888888888888888888776542 23456666666666666 7888888888877642 224567
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHH---cCCHHHHHHHHHHHHHCCCCCCHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCE---NLEAEKAYEVEEHMGLMGLSLEQQEIA 176 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~---~g~~~~A~~lf~~M~~~gv~pd~~t~~ 176 (501)
+..+...|...|++++|...|+++.....-.|+ ..+|..+...|.+ .|+.++|...|+...... ..+..+|.
T Consensus 375 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~ 453 (514)
T 2gw1_A 375 PNFFAEILTDKNDFDKALKQYDLAIELENKLDGIYVGIAPLVGKATLLTRNPTVENFIEATNLLEKASKLD-PRSEQAKI 453 (514)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSSSCSSCSHHHHHHHHHHHTSCCTTHHHHHHHHHHHHHHHC-TTCHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHhC-cccHHHHH
Confidence 888888888888998888888887222211122 2378888888888 888888888888877653 23567788
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010790 177 ALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDW 216 (501)
Q Consensus 177 ~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~ 216 (501)
.+...|.+.|+.++|...|++.... .|+.......+.+
T Consensus 454 ~la~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~~~~~~ 491 (514)
T 2gw1_A 454 GLAQMKLQQEDIDEAITLFEESADL--ARTMEEKLQAITF 491 (514)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHH--CSSHHHHHHHHHH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHh--ccccHHHHHHHHH
Confidence 8888888888999998888887764 4555544333333
No 50
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=98.30 E-value=2.3e-05 Score=73.90 Aligned_cols=154 Identities=7% Similarity=-0.099 Sum_probs=123.6
Q ss_pred hcCCHHHHHHHHHHHHhCCCCC---CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 010790 35 KSKDLTTAISLYESAHSQNLRL---SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLA 111 (501)
Q Consensus 35 k~g~~~~A~~lf~~m~~~gv~p---~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~ 111 (501)
..|++++|+..|+++.+..... +...|..+-..+...+ ++++|...|++..... +.+..+|..+...|
T Consensus 17 ~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~~~~la~~~ 87 (275)
T 1xnf_A 17 PTLQQEVILARMEQILASRALTDDERAQLLYERGVLYDSLG--------LRALARNDFSQALAIR-PDMPEVFNYLGIYL 87 (275)
T ss_dssp CCHHHHHHHHHHHHHHTSSCCCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHHcC-CCcHHHHHHHHHHH
Confidence 4578999999999998764221 3455666666777777 8999999999988753 23688999999999
Q ss_pred HhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHH
Q 010790 112 ASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKV 191 (501)
Q Consensus 112 ~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a 191 (501)
...|++++|...|++. .... +.+..+|..+-..|.+.|+.++|...|+.+... .|+......++..+...|+.++|
T Consensus 88 ~~~~~~~~A~~~~~~a-l~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~--~~~~~~~~~~~~~~~~~~~~~~A 163 (275)
T 1xnf_A 88 TQAGNFDAAYEAFDSV-LELD-PTYNYAHLNRGIALYYGGRDKLAQDDLLAFYQD--DPNDPFRSLWLYLAEQKLDEKQA 163 (275)
T ss_dssp HHTTCHHHHHHHHHHH-HHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCHHHH
T ss_pred HHccCHHHHHHHHHHH-HhcC-ccccHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCChHHHHHHHHHHHhcCHHHH
Confidence 9999999999999999 4432 235788999999999999999999999999874 45555666666667778999999
Q ss_pred HHHHHHHHhC
Q 010790 192 YQYLQKLRST 201 (501)
Q Consensus 192 ~~ll~~M~~~ 201 (501)
...+.+....
T Consensus 164 ~~~~~~~~~~ 173 (275)
T 1xnf_A 164 KEVLKQHFEK 173 (275)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 9999877654
No 51
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=98.28 E-value=0.00018 Score=69.99 Aligned_cols=170 Identities=11% Similarity=0.039 Sum_probs=127.4
Q ss_pred hHHHHHHHHHH-------hcCCH-------HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHH
Q 010790 24 TNFLINLQSCT-------KSKDL-------TTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89 (501)
Q Consensus 24 ~~~n~lI~~~~-------k~g~~-------~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf 89 (501)
..|..+...+. +.|++ ++|..+|++..+.--+-+...|..+...+...+ ++++|.++|
T Consensus 51 ~~w~~~~~~~~~~~~~l~~~g~~~~~~~~~~~A~~~~~rAl~~~~p~~~~~~~~~~~~~~~~~--------~~~~A~~~~ 122 (308)
T 2ond_A 51 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM--------KYEKVHSIY 122 (308)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCHHHHHHHHHHHHHHHHHHTTTTTTCHHHHHHHHHHHHHTT--------CHHHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhcccchHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC--------CHHHHHHHH
Confidence 35555555554 45885 899999999887422234567888888888877 899999999
Q ss_pred HHHHhCCCCCC-H-HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHH-HcCCHHHHHHHHHHHHHC
Q 010790 90 DQMLSNNVIPN-E-ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFC-ENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 90 ~~M~~~g~~pd-~-~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~-~~g~~~~A~~lf~~M~~~ 166 (501)
++..+. .|+ . .+|..+...+.+.|+.++|..+|++. .+.. +++...|........ ..|+.+.|..+|+.....
T Consensus 123 ~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-~~~~-p~~~~~~~~~a~~~~~~~~~~~~A~~~~~~al~~ 198 (308)
T 2ond_A 123 NRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA-REDA-RTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKK 198 (308)
T ss_dssp HHHHTS--SSSCTHHHHHHHHHHHHHHHCHHHHHHHHHHH-HTST-TCCTHHHHHHHHHHHHTSCCHHHHHHHHHHHHHH
T ss_pred HHHHhc--cccCccHHHHHHHHHHHHhcCHHHHHHHHHHH-HhcC-CCCHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 999874 453 3 38999999999999999999999998 4432 123344433322222 269999999999998765
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC-CCCC
Q 010790 167 GLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV-RCVN 206 (501)
Q Consensus 167 gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~-~~p~ 206 (501)
. .-+...|..++..+.+.|+.++|..+|++..... +.|+
T Consensus 199 ~-p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~~l~p~ 238 (308)
T 2ond_A 199 Y-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPE 238 (308)
T ss_dssp H-TTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHSSSSCGG
T ss_pred C-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHhccCCCHH
Confidence 2 2267889999999999999999999999998864 4553
No 52
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=98.25 E-value=0.00013 Score=67.14 Aligned_cols=151 Identities=11% Similarity=-0.006 Sum_probs=118.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|...-..|.+.|++++|+..|++..+..-+++...+..+-..+...+ ++++|.+.|+...+.... +..+
T Consensus 8 ~~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~al~~~p~-~~~~ 78 (228)
T 4i17_A 8 NQLKNEGNDALNAKNYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIK--------KYKEAADYFDIAIKKNYN-LANA 78 (228)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTTCS-HHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhh--------cHHHHHHHHHHHHHhCcc-hHHH
Confidence 5666777788899999999999999887664466666666655777777 899999999998875322 5678
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-h-------hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC---H
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-L-------RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE---Q 172 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~-------~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd---~ 172 (501)
|..+...|...|+.++|...|++. ... .|+ . ..|..+=..+...|+.++|.+.|+..... .|+ .
T Consensus 79 ~~~l~~~~~~~~~~~~A~~~~~~a-l~~--~p~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~~~~~ 153 (228)
T 4i17_A 79 YIGKSAAYRDMKNNQEYIATLTEG-IKA--VPGNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSKKWKT 153 (228)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHH--STTCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHH-HHH--CCCcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCCcccH
Confidence 899999999999999999999998 432 244 3 34666667788899999999999998764 565 4
Q ss_pred HHHHHHHHHHHhcCCh
Q 010790 173 QEIAALLKVSAETGRV 188 (501)
Q Consensus 173 ~t~~~Li~~~~~~g~~ 188 (501)
..|..|-..|...|..
T Consensus 154 ~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 154 DALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 6777777788777766
No 53
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.23 E-value=5.4e-05 Score=78.92 Aligned_cols=163 Identities=9% Similarity=0.004 Sum_probs=134.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..+...|++++|+..|+++.+. .|+...|..+-..+...+ ++++|.+.|+...... +.+..++
T Consensus 245 ~~~~~g~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~~ 313 (537)
T 3fp2_A 245 ALCYTGIFHFLKNNLLDAQVLLQESINL--HPTPNSYIFLALTLADKE--------NSQEFFKFFQKAVDLN-PEYPPTY 313 (537)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHHTCCSS--------CCHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHhc--CCCchHHHHHHHHHHHhc--------CHHHHHHHHHHHhccC-CCCHHHH
Confidence 4566667888999999999999998875 355666666666666666 8999999999988753 2367889
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~ 184 (501)
..+...|...|++++|...|++. .... +.+...|..+-..|...|+.++|..+|+++.... ..+...|..+...|..
T Consensus 314 ~~l~~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~la~~~~~~g~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~ 390 (537)
T 3fp2_A 314 YHRGQMYFILQDYKNAKEDFQKA-QSLN-PENVYPYIQLACLLYKQGKFTESEAFFNETKLKF-PTLPEVPTFFAEILTD 390 (537)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCSHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCTHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHH
Confidence 99999999999999999999998 4432 1245788899999999999999999999988763 2356789999999999
Q ss_pred cCChHHHHHHHHHHHhC
Q 010790 185 TGRVEKVYQYLQKLRST 201 (501)
Q Consensus 185 ~g~~~~a~~ll~~M~~~ 201 (501)
.|+.++|...|++....
T Consensus 391 ~g~~~~A~~~~~~a~~~ 407 (537)
T 3fp2_A 391 RGDFDTAIKQYDIAKRL 407 (537)
T ss_dssp TTCHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHc
Confidence 99999999999987653
No 54
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=98.16 E-value=5.7e-05 Score=71.05 Aligned_cols=159 Identities=12% Similarity=0.044 Sum_probs=118.2
Q ss_pred HHhcCCHHHHHHHHHHHHhC-------CCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC------CCC-
Q 010790 33 CTKSKDLTTAISLYESAHSQ-------NLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN------NVI- 98 (501)
Q Consensus 33 ~~k~g~~~~A~~lf~~m~~~-------gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~------g~~- 98 (501)
....|++++|+.+|++..+. ..+....++..+-..+...+ ++++|...|++.... +-.
T Consensus 11 ~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~~~~~~~~~~ 82 (283)
T 3edt_B 11 SSGLVPRGSAVPLCKQALEDLEKTSGHDHPDVATMLNILALVYRDQN--------KYKEAAHLLNDALAIREKTLGKDHP 82 (283)
T ss_dssp --CCSCSSSHHHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHTCTTCH
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHHHHHHHcCCcch
Confidence 34567777777777776542 21223455666666777777 899999999988764 222
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc------C-CCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC-----
Q 010790 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNEF------N-VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM----- 166 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~------g-i~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~----- 166 (501)
....++..+...|...|++++|...|.+. ... . -+....+|..+-..|...|++++|..+|++....
T Consensus 83 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~ 161 (283)
T 3edt_B 83 AVAATLNNLAVLYGKRGKYKEAEPLCKRA-LEIREKVLGKFHPDVAKQLNNLALLCQNQGKAEEVEYYYRRALEIYATRL 161 (283)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHHHHHHCTTCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHH-HHHHHHHcCCCChHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 34568899999999999999999999987 432 1 1223577888888999999999999999998764
Q ss_pred -CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 167 -GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 167 -gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
+-.| ...++..|...|...|+.++|..+|.+...
T Consensus 162 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~ 197 (283)
T 3edt_B 162 GPDDPNVAKTKNNLASCYLKQGKYQDAETLYKEILT 197 (283)
T ss_dssp CTTCHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1122 346788899999999999999999998765
No 55
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=98.15 E-value=0.00014 Score=79.89 Aligned_cols=161 Identities=9% Similarity=-0.012 Sum_probs=135.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
..|+.|=..|.+.|++++|+..|++..+. .| +...|+.|=.++...| ++++|++.|++..+... -+..
T Consensus 10 ~al~nLG~~~~~~G~~~eAi~~~~kAl~l--~P~~~~a~~nLg~~l~~~g--------~~~eA~~~~~~Al~l~P-~~~~ 78 (723)
T 4gyw_A 10 DSLNNLANIKREQGNIEEAVRLYRKALEV--FPEFAAAHSNLASVLQQQG--------KLQEALMHYKEAIRISP-TFAD 78 (723)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCT-TCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCC-CCHH
Confidence 48899999999999999999999998864 34 3677877777888888 89999999999877422 2577
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL-EQQEIAALLK 180 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p-d~~t~~~Li~ 180 (501)
+|+.+-.+|...|++++|.+.|++. .+. .| +...|+.+-..|.+.|++++|.+.|++..+. .| +...|..|..
T Consensus 79 a~~nLg~~l~~~g~~~~A~~~~~kA-l~l--~P~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l--~P~~~~a~~~L~~ 153 (723)
T 4gyw_A 79 AYSNMGNTLKEMQDVQGALQCYTRA-IQI--NPAFADAHSNLASIHKDSGNIPEAIASYRTALKL--KPDFPDAYCNLAH 153 (723)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCCHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCChHHHhhhhh
Confidence 8999999999999999999999988 432 34 4578999999999999999999999998765 34 5678999999
Q ss_pred HHHhcCChHHHHHHHHHHHh
Q 010790 181 VSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~M~~ 200 (501)
.|...|+.++|.+.+++..+
T Consensus 154 ~l~~~g~~~~A~~~~~kal~ 173 (723)
T 4gyw_A 154 CLQIVCDWTDYDERMKKLVS 173 (723)
T ss_dssp HHHHTTCCTTHHHHHHHHHH
T ss_pred HHHhcccHHHHHHHHHHHHH
Confidence 99999999999888887643
No 56
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.11 E-value=0.00023 Score=67.01 Aligned_cols=164 Identities=12% Similarity=0.021 Sum_probs=126.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC--HHH
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN--EAS 103 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd--~~t 103 (501)
+-..-..+.+.|++++|+.+|+++.+..- -+...+..+-..+...+ ++++|.+.|+......-.|+ ..+
T Consensus 6 ~~~~a~~~~~~~~~~~A~~~~~~~l~~~p-~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~~~~~~~~~~ 76 (272)
T 3u4t_A 6 EFRYADFLFKNNNYAEAIEVFNKLEAKKY-NSPYIYNRRAVCYYELA--------KYDLAQKDIETYFSKVNATKAKSAD 76 (272)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHTTC-CCSTTHHHHHHHHHHTT--------CHHHHHHHHHHHHTTSCTTTCCHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHhccCchhHHHHH
Confidence 44556778899999999999999887542 23346666666777777 89999999999988432222 445
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
|..+...|...|++++|...|++. .... +.+..+|..+-..|...|+.++|...|++..... ..+...|..+...+.
T Consensus 77 ~~~lg~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~ 153 (272)
T 3u4t_A 77 FEYYGKILMKKGQDSLAIQQYQAA-VDRD-TTRLDMYGQIGSYFYNKGNFPLAIQYMEKQIRPT-TTDPKVFYELGQAYY 153 (272)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHGGGCCSS-CCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcccHHHHHHHHHHH-HhcC-cccHHHHHHHHHHHHHccCHHHHHHHHHHHhhcC-CCcHHHHHHHHHHHH
Confidence 889999999999999999999998 4432 1355788999999999999999999999887652 235566776662444
Q ss_pred hcCChHHHHHHHHHHHhC
Q 010790 184 ETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 184 ~~g~~~~a~~ll~~M~~~ 201 (501)
..++.++|...|++..+.
T Consensus 154 ~~~~~~~A~~~~~~a~~~ 171 (272)
T 3u4t_A 154 YNKEYVKADSSFVKVLEL 171 (272)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 556999999999998765
No 57
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=98.11 E-value=0.00023 Score=62.06 Aligned_cols=132 Identities=10% Similarity=-0.067 Sum_probs=109.3
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...+..+...|.+.|+.++|...|+++.+.. +.+...+..+...+...+ ++++|.++|+++.... +.+..
T Consensus 42 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~ 111 (186)
T 3as5_A 42 VDVALHLGIAYVKTGAVDRGTELLERSLADA-PDNVKVATVLGLTYVQVQ--------KYDLAVPLLIKVAEAN-PINFN 111 (186)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHH
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhcC-cHhHH
Confidence 4578888999999999999999999988653 335667777777777766 8999999999987753 34778
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
.+..+...+...|++++|...+++. .... +.+..++..+...|.+.|+.++|...++.....
T Consensus 112 ~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~ 173 (186)
T 3as5_A 112 VRFRLGVALDNLGRFDEAIDSFKIA-LGLR-PNEGKVHRAIAFSYEQMGRHEEALPHFKKANEL 173 (186)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHH-HhcC-ccchHHHHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 8999999999999999999999998 4432 245688999999999999999999999887653
No 58
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=98.05 E-value=0.00013 Score=76.07 Aligned_cols=166 Identities=8% Similarity=0.004 Sum_probs=132.2
Q ss_pred HhHHHHHHHHHHhcCCH-HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 23 ETNFLINLQSCTKSKDL-TTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~-~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
...|..+-..|...|++ ++|+..|++..+.. +-+...|..|-..+...+ ++++|.+.|++..+. .|+.
T Consensus 102 a~~~~~lg~~~~~~g~~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g--------~~~~A~~~~~~al~~--~p~~ 170 (474)
T 4abn_A 102 AQALMLKGKALNVTPDYSPEAEVLLSKAVKLE-PELVEAWNQLGEVYWKKG--------DVTSAHTCFSGALTH--CKNK 170 (474)
T ss_dssp HHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHTT--CCCH
T ss_pred HHHHHHHHHHHHhccccHHHHHHHHHHHHhhC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHhh--CCCH
Confidence 34677777888889999 99999999987653 224667777777777777 899999999998875 4777
Q ss_pred HHHHHHHHHHHhC---------CCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHc--------CCHHHHHHHHHHHH
Q 010790 102 ASVTSVARLAASK---------NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCEN--------LEAEKAYEVEEHMG 164 (501)
Q Consensus 102 ~t~~~li~~~~~~---------g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~--------g~~~~A~~lf~~M~ 164 (501)
.++..+-..|... |++++|...|++. .... +-+...|..+-.+|... |++++|...|+...
T Consensus 171 ~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al 248 (474)
T 4abn_A 171 VSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLA-VQMD-VLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAE 248 (474)
T ss_dssp HHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHH
Confidence 8888999999999 9999999999988 4432 23467888888888888 88999999999987
Q ss_pred HCCCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 165 LMGLS--LEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 165 ~~gv~--pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
...-. -+...|..+-..|...|+.++|++.|++....
T Consensus 249 ~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 287 (474)
T 4abn_A 249 KVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAAL 287 (474)
T ss_dssp HHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 75210 27788999999999999999999999887654
No 59
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.03 E-value=0.00044 Score=72.74 Aligned_cols=165 Identities=10% Similarity=0.062 Sum_probs=123.9
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-H-HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS-L-HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~-~-~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
...|..+...+.+.|++++|..+|+++.+. .|+ . ..|..+.....+.+ .+++|+++|+.-.+... .+
T Consensus 321 ~~l~~~~~~~~~~~g~~~~A~~~~~~al~~--~p~~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~Al~~~~-~~ 389 (530)
T 2ooe_A 321 MLLYFAYADYEESRMKYEKVHSIYNRLLAI--EDIDPTLVYIQYMKFARRAE--------GIKSGRMIFKKAREDAR-TR 389 (530)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHS--SSSCHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHTCTT-CC
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHhCc--cccCchHHHHHHHHHHHHhc--------CHHHHHHHHHHHHhccC-Cc
Confidence 357888889999999999999999998874 454 2 46777777666655 79999999998876522 12
Q ss_pred HHHHHHHHHH-HHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCC-CCCC--HHHH
Q 010790 101 EASVTSVARL-AASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMG-LSLE--QQEI 175 (501)
Q Consensus 101 ~~t~~~li~~-~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~g-v~pd--~~t~ 175 (501)
...|...... +...|+.++|..+|+...+.. | +...|..++..+.+.|+.+.|..+|+.....+ ..|+ ...|
T Consensus 390 ~~~~~~~a~~~~~~~~~~~~A~~~~e~al~~~---p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~~~~~~~~~~lw 466 (530)
T 2ooe_A 390 HHVYVTAALMEYYCSKDKSVAFKIFELGLKKY---GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIW 466 (530)
T ss_dssp THHHHHHHHHHHHHTCCHHHHHHHHHHHHHHH---TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSCCSCGGGCHHHH
T ss_pred hHHHHHHHHHHHHHcCChhHHHHHHHHHHHHC---CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhccCCCHHHHHHHH
Confidence 2223222222 336899999999999873332 4 56888889999999999999999999988763 3332 5588
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 176 AALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 176 ~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
...+....+.|+.+.+..++.++.+.
T Consensus 467 ~~~~~~e~~~G~~~~~~~~~~r~~~~ 492 (530)
T 2ooe_A 467 ARFLAFESNIGDLASILKVEKRRFTA 492 (530)
T ss_dssp HHHHHHHHHSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 88888888899999999999888664
No 60
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=98.03 E-value=0.00039 Score=65.35 Aligned_cols=165 Identities=8% Similarity=-0.066 Sum_probs=125.3
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC--HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS--LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~--~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
..+..+...|.+.|++++|+..|+++.+..-.|+ ...|..+-..+...+ ++++|.+.|+...+... -+.
T Consensus 38 ~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~lg~~~~~~~--------~~~~A~~~~~~a~~~~~-~~~ 108 (272)
T 3u4t_A 38 YIYNRRAVCYYELAKYDLAQKDIETYFSKVNATKAKSADFEYYGKILMKKG--------QDSLAIQQYQAAVDRDT-TRL 108 (272)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHHHHTTSCTTTCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHST-TCT
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHcc--------cHHHHHHHHHHHHhcCc-ccH
Confidence 3677788899999999999999999988442222 334666666777777 89999999999887532 355
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
.++..+...|...|++++|...|++. ... .|+ ...|..+-..+...++.++|.+.|++..... +.+...|..+..
T Consensus 109 ~~~~~l~~~~~~~~~~~~A~~~~~~a-l~~--~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~~~~ 184 (272)
T 3u4t_A 109 DMYGQIGSYFYNKGNFPLAIQYMEKQ-IRP--TTTDPKVFYELGQAYYYNKEYVKADSSFVKVLELK-PNIYIGYLWRAR 184 (272)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHGGG-CCS--SCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHH-hhc--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-ccchHHHHHHHH
Confidence 78999999999999999999999998 443 444 4555555524445679999999999988753 224677777888
Q ss_pred HHHhcCC---hHHHHHHHHHHHhC
Q 010790 181 VSAETGR---VEKVYQYLQKLRST 201 (501)
Q Consensus 181 ~~~~~g~---~~~a~~ll~~M~~~ 201 (501)
.+...|+ .++|...+.+..+.
T Consensus 185 ~~~~~~~~~~~~~A~~~~~~a~~~ 208 (272)
T 3u4t_A 185 ANAAQDPDTKQGLAKPYYEKLIEV 208 (272)
T ss_dssp HHHHHSTTCSSCTTHHHHHHHHHH
T ss_pred HHHHcCcchhhHHHHHHHHHHHHH
Confidence 8888787 77788888776543
No 61
>2ooe_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 3.00A {Mus musculus} SCOP: a.118.8.7
Probab=98.02 E-value=0.00035 Score=73.47 Aligned_cols=165 Identities=12% Similarity=0.072 Sum_probs=125.6
Q ss_pred hHHHHHHHHHHh-------cCCHH-------HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHH
Q 010790 24 TNFLINLQSCTK-------SKDLT-------TAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89 (501)
Q Consensus 24 ~~~n~lI~~~~k-------~g~~~-------~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf 89 (501)
..|......+.+ .|+++ +|..+|++..+.-.+-+...|..+...+...+ .+++|..+|
T Consensus 273 ~~w~~~~~~~~~~~~~~~~~g~~~~a~~~~~~A~~~~~~Al~~~~p~~~~l~~~~~~~~~~~g--------~~~~A~~~~ 344 (530)
T 2ooe_A 273 DIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRM--------KYEKVHSIY 344 (530)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHTTTTCSSCHHHHHHHHHHHHHTT--------CHHHHHHHH
T ss_pred HHHHHHHHHHHHhchhhhhccchhhhhhhhHHHHHHHHHHHHHhCcccHHHHHHHHHHHHhcC--------CHHHHHHHH
Confidence 355555555554 68877 89999999886323335778888888888877 899999999
Q ss_pred HHHHhCCCCCC--HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHH-HHHHHHcCCHHHHHHHHHHHHH
Q 010790 90 DQMLSNNVIPN--EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPA-LFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 90 ~~M~~~g~~pd--~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~l-I~~~~~~g~~~~A~~lf~~M~~ 165 (501)
+...+. .|+ ...|..++..+.+.|+.++|..+|+.. .+. .|+ ...|... .-.+...|+.+.|..+|+....
T Consensus 345 ~~al~~--~p~~~~~~~~~~~~~~~~~~~~~~A~~~~~~A-l~~--~~~~~~~~~~~a~~~~~~~~~~~~A~~~~e~al~ 419 (530)
T 2ooe_A 345 NRLLAI--EDIDPTLVYIQYMKFARRAEGIKSGRMIFKKA-RED--ARTRHHVYVTAALMEYYCSKDKSVAFKIFELGLK 419 (530)
T ss_dssp HHHHHS--SSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTC--TTCCTHHHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHhCc--cccCchHHHHHHHHHHHHhcCHHHHHHHHHHH-Hhc--cCCchHHHHHHHHHHHHHcCChhHHHHHHHHHHH
Confidence 999884 454 358999999999999999999999998 443 233 2222221 1223468999999999998776
Q ss_pred CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 010790 166 MGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 166 ~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~ 202 (501)
.. .-+...|..++..+.+.|+.++|..+|++.....
T Consensus 420 ~~-p~~~~~~~~~~~~~~~~g~~~~Ar~~~~~al~~~ 455 (530)
T 2ooe_A 420 KY-GDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSG 455 (530)
T ss_dssp HH-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHSC
T ss_pred HC-CCCHHHHHHHHHHHHhCCCHhhHHHHHHHHHhcc
Confidence 52 2257899999999999999999999999988763
No 62
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=98.01 E-value=0.00037 Score=72.52 Aligned_cols=129 Identities=7% Similarity=-0.074 Sum_probs=65.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+-..|.+.|++++|+..|+++.+.. +.+..+|..+-..+...+ ++++|.+.|++...... -+..+
T Consensus 277 ~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~~-~~~~~ 346 (537)
T 3fp2_A 277 NSYIFLALTLADKENSQEFFKFFQKAVDLN-PEYPPTYYHRGQMYFILQ--------DYKNAKEDFQKAQSLNP-ENVYP 346 (537)
T ss_dssp HHHHHHHHHTCCSSCCHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCT-TCSHH
T ss_pred hHHHHHHHHHHHhcCHHHHHHHHHHHhccC-CCCHHHHHHHHHHHHhcC--------CHHHHHHHHHHHHHhCC-CCHHH
Confidence 344555555555566666666665554432 123344444444444444 55555555555554321 12344
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
+..+...|...|++++|..+|+++ .... +.+...|..+-..|...|+.++|...|+.+.
T Consensus 347 ~~~la~~~~~~g~~~~A~~~~~~~-~~~~-~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~ 405 (537)
T 3fp2_A 347 YIQLACLLYKQGKFTESEAFFNET-KLKF-PTLPEVPTFFAEILTDRGDFDTAIKQYDIAK 405 (537)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCChHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 555555555555555555555555 2221 1233455555555555555555555555543
No 63
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.97 E-value=0.00018 Score=70.32 Aligned_cols=145 Identities=10% Similarity=0.007 Sum_probs=110.4
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHhCCCHHHH
Q 010790 42 AISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV-IPNEASVTSVARLAASKNDGDYA 120 (501)
Q Consensus 42 A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~-~pd~~t~~~li~~~~~~g~~~~A 120 (501)
|+..|++..+.+ .++..++..+-.++...+ +.++|++++.+-...|. .-+...+..++..+.+.|+.+.|
T Consensus 85 a~~~l~~l~~~~-~~~~~~~~~la~i~~~~g--------~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~r~d~A 155 (310)
T 3mv2_B 85 NIEELENLLKDK-QNSPYELYLLATAQAILG--------DLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNNNVSTA 155 (310)
T ss_dssp CCHHHHHTTTTS-CCCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTTCHHHH
T ss_pred HHHHHHHHHhcC-CCCcHHHHHHHHHHHHcC--------CHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCCCHHHH
Confidence 777888877665 456566554445666666 89999999998866654 23677888999999999999999
Q ss_pred HHHHHHhHhhcCCCC-----ChhhHHHHHHHHH--HcC--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHH
Q 010790 121 FVLIKRMNNEFNVVP-----RLRTYDPALFCFC--ENL--EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKV 191 (501)
Q Consensus 121 ~~l~~~M~~~~gi~P-----~~~ty~~lI~~~~--~~g--~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a 191 (501)
.++++.| ... .| +..+..-|..++. ..| +...|+.+|+++... .|+..+-..|+.++.+.|++++|
T Consensus 156 ~k~l~~~-~~~--~~d~~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El~~~--~p~~~~~~lLln~~~~~g~~~eA 230 (310)
T 3mv2_B 156 STIFDNY-TNA--IEDTVSGDNEMILNLAESYIKFATNKETATSNFYYYEELSQT--FPTWKTQLGLLNLHLQQRNIAEA 230 (310)
T ss_dssp HHHHHHH-HHH--SCHHHHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHHHTT--SCSHHHHHHHHHHHHHHTCHHHH
T ss_pred HHHHHHH-Hhc--CccccccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHHHHh--CCCcccHHHHHHHHHHcCCHHHH
Confidence 9999999 553 36 3566666666633 334 899999999999765 46655556666789999999999
Q ss_pred HHHHHHHHh
Q 010790 192 YQYLQKLRS 200 (501)
Q Consensus 192 ~~ll~~M~~ 200 (501)
.+.++.+.+
T Consensus 231 e~~L~~l~~ 239 (310)
T 3mv2_B 231 QGIVELLLS 239 (310)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHH
Confidence 999997654
No 64
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=97.94 E-value=9.6e-05 Score=77.05 Aligned_cols=169 Identities=8% Similarity=-0.063 Sum_probs=132.1
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC-CCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDS-ATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~-~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
...|..+-..|.+.|++++|+..|++..+.. |+...+..|-..+... ......+.|++++|.+.|++..+.. +-+.
T Consensus 137 ~~a~~~lg~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~lg~~~~~~~~~~~~~~~g~~~~A~~~~~~al~~~-p~~~ 213 (474)
T 4abn_A 137 VEAWNQLGEVYWKKGDVTSAHTCFSGALTHC--KNKVSLQNLSMVLRQLQTDSGDEHSRHVMDSVRQAKLAVQMD-VLDG 213 (474)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTC--CCHHHHHHHHHHHTTCCCSCHHHHHHHHHHHHHHHHHHHHHC-TTCH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC--CCHHHHHHHHHHHHHhccCChhhhhhhHHHHHHHHHHHHHhC-CCCH
Confidence 3578889999999999999999999998764 6766666666666665 0000011138999999999988753 2367
Q ss_pred HHHHHHHHHHHhC--------CCHHHHHHHHHHhHhhcCCCC----ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC
Q 010790 102 ASVTSVARLAASK--------NDGDYAFVLIKRMNNEFNVVP----RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS 169 (501)
Q Consensus 102 ~t~~~li~~~~~~--------g~~~~A~~l~~~M~~~~gi~P----~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~ 169 (501)
..|..+..+|... |++++|...|++. ... .| +...|..+-..|...|+.++|.+.|++..... .
T Consensus 214 ~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~a-l~~--~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p 289 (474)
T 4abn_A 214 RSWYILGNAYLSLYFNTGQNPKISQQALSAYAQA-EKV--DRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAALD-P 289 (474)
T ss_dssp HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-HHH--CGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-T
T ss_pred HHHHHHHHHHHHHHHhhccccchHHHHHHHHHHH-HHh--CCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-C
Confidence 8899999999998 9999999999998 442 35 77889999999999999999999999987653 2
Q ss_pred CCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 170 LEQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 170 pd~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
-+...+..+...+...|+.++|++.+.++
T Consensus 290 ~~~~a~~~l~~~~~~lg~~~eAi~~~~~~ 318 (474)
T 4abn_A 290 AWPEPQQREQQLLEFLSRLTSLLESKGKT 318 (474)
T ss_dssp TCHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 25567888888898889888888765443
No 65
>3mv2_B Coatomer subunit epsilon; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_B
Probab=97.94 E-value=0.0008 Score=65.76 Aligned_cols=170 Identities=9% Similarity=0.038 Sum_probs=124.4
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCC--
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP-- 99 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p-- 99 (501)
+..+..+-..+...|++++|++++.+-...+-.+ +...+..++..+.+.+ +.+.|.++++.|... .|
T Consensus 100 ~~~~~~la~i~~~~g~~eeAL~~l~~~i~~~~~~~~lea~~l~vqi~L~~~--------r~d~A~k~l~~~~~~--~~d~ 169 (310)
T 3mv2_B 100 PYELYLLATAQAILGDLDKSLETCVEGIDNDEAEGTTELLLLAIEVALLNN--------NVSTASTIFDNYTNA--IEDT 169 (310)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTSSCSTTHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHH--SCHH
T ss_pred cHHHHHHHHHHHHcCCHHHHHHHHHHHhccCCCcCcHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhc--Cccc
Confidence 3445577788999999999999999876655423 3455556666888888 899999999999874 56
Q ss_pred ---CHHHHHHHHHHHHh--CC--CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC-----C
Q 010790 100 ---NEASVTSVARLAAS--KN--DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM-----G 167 (501)
Q Consensus 100 ---d~~t~~~li~~~~~--~g--~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~-----g 167 (501)
+..+..-|+.++.. .| +..+|+.+|+++ ... .|+..+-..++.++.+.|++++|.++++.+... .
T Consensus 170 ~~~~d~~l~~Laea~v~l~~g~~~~q~A~~~f~El-~~~--~p~~~~~~lLln~~~~~g~~~eAe~~L~~l~~~~p~~~~ 246 (310)
T 3mv2_B 170 VSGDNEMILNLAESYIKFATNKETATSNFYYYEEL-SQT--FPTWKTQLGLLNLHLQQRNIAEAQGIVELLLSDYYSVEQ 246 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCSTTTHHHHHHHHH-HTT--SCSHHHHHHHHHHHHHHTCHHHHHHHHHHHHSHHHHTTT
T ss_pred cccchHHHHHHHHHHHHHHhCCccHHHHHHHHHHH-HHh--CCCcccHHHHHHHHHHcCCHHHHHHHHHHHHHhcccccc
Confidence 36666777766333 34 999999999999 432 366555566677899999999999999876542 1
Q ss_pred C----CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHH
Q 010790 168 L----SLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEET 209 (501)
Q Consensus 168 v----~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t 209 (501)
. .-+..++..+|..+...|+ +|.+++.++... .|+...
T Consensus 247 k~~~~p~~~~~LaN~i~l~~~lgk--~a~~l~~qL~~~--~P~hp~ 288 (310)
T 3mv2_B 247 KENAVLYKPTFLANQITLALMQGL--DTEDLTNQLVKL--DHEHAF 288 (310)
T ss_dssp CHHHHSSHHHHHHHHHHHHHHTTC--TTHHHHHHHHHT--TCCCHH
T ss_pred cccCCCCCHHHHHHHHHHHHHhCh--HHHHHHHHHHHh--CCCChH
Confidence 1 2356677677777777776 788999999875 455543
No 66
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=97.91 E-value=0.001 Score=61.38 Aligned_cols=165 Identities=12% Similarity=0.042 Sum_probs=115.8
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-CC
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNL-RLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-PN 100 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv-~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-pd 100 (501)
..+-.+-..+.+.|+.++|+..|+++.+..- .|. ...+..+-..+...+ ++++|+..|+...+.... +.
T Consensus 5 ~~~~~~a~~~~~~g~~~~A~~~~~~~~~~~p~~~~~~~a~~~lg~~~~~~~--------~~~~A~~~~~~~l~~~P~~~~ 76 (225)
T 2yhc_A 5 NEIYATAQQKLQDGNWRQAITQLEALDNRYPFGPYSQQVQLDLIYAYYKNA--------DLPLAQAAIDRFIRLNPTHPN 76 (225)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCTTCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHhcC--------CHHHHHHHHHHHHHHCcCCCc
Confidence 3444455668889999999999999886432 121 234555555677777 899999999998875433 22
Q ss_pred H-HHHHHHHHHHH------------------hCCCHHHHHHHHHHhHhhcCCCCChh-hHH-----------------HH
Q 010790 101 E-ASVTSVARLAA------------------SKNDGDYAFVLIKRMNNEFNVVPRLR-TYD-----------------PA 143 (501)
Q Consensus 101 ~-~t~~~li~~~~------------------~~g~~~~A~~l~~~M~~~~gi~P~~~-ty~-----------------~l 143 (501)
. ..+-.+-..+. ..|+.++|...|+++ .+ ..|+.. .+. .+
T Consensus 77 ~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~-l~--~~P~~~~a~~a~~~l~~~~~~~~~~~~~~ 153 (225)
T 2yhc_A 77 IDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSKL-VR--GYPNSQYTTDATKRLVFLKDRLAKYEYSV 153 (225)
T ss_dssp HHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHHH-HT--TCTTCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHHH-HH--HCcCChhHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12323333333 367899999999999 33 235543 221 23
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHCCCCCC----HHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 144 LFCFCENLEAEKAYEVEEHMGLMGLSLE----QQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 144 I~~~~~~g~~~~A~~lf~~M~~~gv~pd----~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
-..|.+.|+.+.|...|+.+... .|+ ...+..+..+|.+.|+.++|...++.+...
T Consensus 154 a~~~~~~~~~~~A~~~~~~~l~~--~p~~~~~~~a~~~l~~~~~~~g~~~~A~~~~~~l~~~ 213 (225)
T 2yhc_A 154 AEYYTERGAWVAVVNRVEGMLRD--YPDTQATRDALPLMENAYRQMQMNAQAEKVAKIIAAN 213 (225)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHH--STTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHHHHHHH--CcCCCccHHHHHHHHHHHHHcCCcHHHHHHHHHHHhh
Confidence 34578899999999999998875 333 246888899999999999999999988765
No 67
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.87 E-value=0.00015 Score=70.21 Aligned_cols=167 Identities=7% Similarity=-0.085 Sum_probs=125.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.|+.....|...|++++|+..|.+..+. |-+++ ..+|+.+-..+...| ++++|+..|++-...
T Consensus 39 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g--------~~~~A~~~~~~Al~l~~~~ 110 (292)
T 1qqe_A 39 LCVQAATIYRLRKELNLAGDSFLKAADYQKKAGNEDEAGNTYVEAYKCFKSGG--------NSVNAVDSLENAIQIFTHR 110 (292)
T ss_dssp HHHHHHHHHHHTTCTHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHHc
Confidence 6888888999999999999999987643 32222 456777777888887 899999998876552
Q ss_pred CCCC-CHHHHHHHHHHHHhC-CCHHHHHHHHHHhHhhcC-CCCC----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCC
Q 010790 96 NVIP-NEASVTSVARLAASK-NDGDYAFVLIKRMNNEFN-VVPR----LRTYDPALFCFCENLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 96 g~~p-d~~t~~~li~~~~~~-g~~~~A~~l~~~M~~~~g-i~P~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv 168 (501)
|-.. -..+++.+-..|... |++++|...|++. .... -..+ ..+|+.+-..|.+.|+.++|...|++......
T Consensus 111 g~~~~~a~~~~~lg~~~~~~lg~~~~A~~~~~~A-l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~ 189 (292)
T 1qqe_A 111 GQFRRGANFKFELGEILENDLHDYAKAIDCYELA-GEWYAQDQSVALSNKCFIKCADLKALDGQYIEASDIYSKLIKSSM 189 (292)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHH-HHHHHhCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 2111 145788899999996 9999999999987 3210 0011 35688888999999999999999999887643
Q ss_pred CCCH------HHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 169 SLEQ------QEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 169 ~pd~------~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
.... ..|..+..++...|+.++|...|++...
T Consensus 190 ~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 227 (292)
T 1qqe_A 190 GNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQS 227 (292)
T ss_dssp SCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGC
T ss_pred cCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHh
Confidence 2221 2577788889999999999999988654
No 68
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=97.76 E-value=0.0025 Score=59.85 Aligned_cols=172 Identities=8% Similarity=-0.028 Sum_probs=123.2
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC-CC
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLR-LS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV-IP 99 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~-p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~-~p 99 (501)
...+-.+-..+.+.|++++|+..|+++.+..-. |. ...+..+-..+...+ ++++|...|+....... .|
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~--------~~~~A~~~~~~~l~~~p~~~ 86 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNK--------EYLLAASEYERFIQIYQIDP 86 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCTTCT
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHHHCCCCc
Confidence 345555566778899999999999999875421 11 344444545667777 89999999999987532 22
Q ss_pred C-HHHHHHHHHHHHh--------CCCHHHHHHHHHHhHhhcCCCCCh-hhH-----------------HHHHHHHHHcCC
Q 010790 100 N-EASVTSVARLAAS--------KNDGDYAFVLIKRMNNEFNVVPRL-RTY-----------------DPALFCFCENLE 152 (501)
Q Consensus 100 d-~~t~~~li~~~~~--------~g~~~~A~~l~~~M~~~~gi~P~~-~ty-----------------~~lI~~~~~~g~ 152 (501)
+ ..++..+...+.. .|++++|...|++..... |+. ... -.+-..|.+.|+
T Consensus 87 ~~~~a~~~lg~~~~~~~~~~~~~~~~~~~A~~~~~~~l~~~---p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~ 163 (261)
T 3qky_A 87 RVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFIDRY---PNHELVDDATQKIRELRAKLARKQYEAARLYERREL 163 (261)
T ss_dssp THHHHHHHHHHHHHHHCCCTTSCCHHHHHHHHHHHHHHHHC---TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHHHHHhcccccccchhHHHHHHHHHHHHHHC---cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC
Confidence 2 4566777778888 999999999999983332 443 333 334567889999
Q ss_pred HHHHHHHHHHHHHCCCC-C-CHHHHHHHHHHHHhc----------CChHHHHHHHHHHHhCCCCCCH
Q 010790 153 AEKAYEVEEHMGLMGLS-L-EQQEIAALLKVSAET----------GRVEKVYQYLQKLRSTVRCVNE 207 (501)
Q Consensus 153 ~~~A~~lf~~M~~~gv~-p-d~~t~~~Li~~~~~~----------g~~~~a~~ll~~M~~~~~~p~~ 207 (501)
.++|...|+......-. + ....+..+..+|... |+.++|...|++.... .|+.
T Consensus 164 ~~~A~~~~~~~l~~~p~~~~~~~a~~~l~~~~~~~g~~~~~~~~~~~~~~A~~~~~~~~~~--~p~~ 228 (261)
T 3qky_A 164 YEAAAVTYEAVFDAYPDTPWADDALVGAMRAYIAYAEQSVRARQPERYRRAVELYERLLQI--FPDS 228 (261)
T ss_dssp HHHHHHHHHHHHHHCTTSTTHHHHHHHHHHHHHHHHHTSCGGGHHHHHHHHHHHHHHHHHH--CTTC
T ss_pred HHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHhcccchhhcccchHHHHHHHHHHHHHH--CCCC
Confidence 99999999998765211 1 245677777788765 8889999999998765 4554
No 69
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.75 E-value=0.0013 Score=66.64 Aligned_cols=171 Identities=10% Similarity=0.044 Sum_probs=136.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhh-HHHHHHHHHHHHhCCCCCCHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSA-LRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~-~~~a~~lf~~M~~~g~~pd~~ 102 (501)
..|+.+-..+.+.|+.++|+.+|+++.+..- -+...|+.+-.++...+ + +++|+..|++...... -+..
T Consensus 98 ~a~~~lg~~~~~~g~~~~Al~~~~~al~l~P-~~~~a~~~~g~~l~~~g--------~d~~eAl~~~~~al~l~P-~~~~ 167 (382)
T 2h6f_A 98 DVYDYFRAVLQRDERSERAFKLTRDAIELNA-ANYTVWHFRRVLLKSLQ--------KDLHEEMNYITAIIEEQP-KNYQ 167 (382)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTT--------CCHHHHHHHHHHHHHHCT-TCHH
T ss_pred HHHHHHHHHHHHCCChHHHHHHHHHHHHhCc-cCHHHHHHHHHHHHHcc--------cCHHHHHHHHHHHHHHCC-CCHH
Confidence 3678888889999999999999999886431 24566777766777766 6 9999999999987533 2678
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
.|+.+-.++...|++++|+..|+++ .... +-+...|..+-.++.+.|++++|...|+.+....-. +...|+.+-..+
T Consensus 168 a~~~~g~~~~~~g~~~eAl~~~~ka-l~ld-P~~~~a~~~lg~~~~~~g~~~eAl~~~~~al~l~P~-~~~a~~~lg~~l 244 (382)
T 2h6f_A 168 VWHHRRVLVEWLRDPSQELEFIADI-LNQD-AKNYHAWQHRQWVIQEFKLWDNELQYVDQLLKEDVR-NNSVWNQRYFVI 244 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHH-HHhC-ccCHHHHHHHHHHHHHcCChHHHHHHHHHHHHhCCC-CHHHHHHHHHHH
Confidence 8999999999999999999999999 4432 125688888889999999999999999999886533 678999999999
Q ss_pred Hh-cCChHHH-----HHHHHHHHhCCCCCCHHH
Q 010790 183 AE-TGRVEKV-----YQYLQKLRSTVRCVNEET 209 (501)
Q Consensus 183 ~~-~g~~~~a-----~~ll~~M~~~~~~p~~~t 209 (501)
.+ .|..++| +..|++.... .|+...
T Consensus 245 ~~l~~~~~eA~~~~el~~~~~Al~l--~P~~~~ 275 (382)
T 2h6f_A 245 SNTTGYNDRAVLEREVQYTLEMIKL--VPHNES 275 (382)
T ss_dssp HHTTCSCSHHHHHHHHHHHHHHHHH--STTCHH
T ss_pred HHhcCcchHHHHHHHHHHHHHHHHH--CCCCHH
Confidence 99 6765777 4777776653 465443
No 70
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.73 E-value=0.001 Score=70.59 Aligned_cols=153 Identities=11% Similarity=-0.023 Sum_probs=88.1
Q ss_pred cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC
Q 010790 36 SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN 115 (501)
Q Consensus 36 ~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g 115 (501)
.|+.++|+..|++..+.. +-+...|..+-..+...+ ++++|.+.|++..+.. +-+..++..+...|...|
T Consensus 2 ~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g 71 (568)
T 2vsy_A 2 TADGPRELLQLRAAVRHR-PQDFVAWLMLADAELGMG--------DTTAGEMAVQRGLALH-PGHPEAVARLGRVRWTQQ 71 (568)
T ss_dssp --------------------CCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHTTS-TTCHHHHHHHHHHHHHTT
T ss_pred CccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCC
Confidence 366777777777765432 123455555555555555 6777777777776542 224667777777777778
Q ss_pred CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc---CChHHHH
Q 010790 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET---GRVEKVY 192 (501)
Q Consensus 116 ~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~---g~~~~a~ 192 (501)
++++|.+.|++. .+.. +-+...|..+-..|.+.|+.++|.+.|++.....- -+...+..+...+... |+.++|.
T Consensus 72 ~~~~A~~~~~~a-l~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~l~~~~~~~~~~g~~~~A~ 148 (568)
T 2vsy_A 72 RHAEAAVLLQQA-SDAA-PEHPGIALWLGHALEDAGQAEAAAAAYTRAHQLLP-EEPYITAQLLNWRRRLCDWRALDVLS 148 (568)
T ss_dssp CHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCCTTHHHHH
T ss_pred CHHHHHHHHHHH-HhcC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhhccccHHHHH
Confidence 888887777776 3321 12356677777777777888888777777665421 2456677777777777 7777777
Q ss_pred HHHHHHHhC
Q 010790 193 QYLQKLRST 201 (501)
Q Consensus 193 ~ll~~M~~~ 201 (501)
+.+++..+.
T Consensus 149 ~~~~~al~~ 157 (568)
T 2vsy_A 149 AQVRAAVAQ 157 (568)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 777776554
No 71
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=97.72 E-value=0.0012 Score=63.69 Aligned_cols=166 Identities=6% Similarity=-0.094 Sum_probs=119.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCCHH----HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-C
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNL-RLSLH----HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-P 99 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv-~p~~~----ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-p 99 (501)
+...+..+.+.|+.++|..++++..+... .|+.. .+..+...+...+ .+++|...|++....... +
T Consensus 78 l~~~i~~~~~~~~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~Ai~~~~~al~~~~~~~ 149 (293)
T 3u3w_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKV--------DYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSS--------CHHHHHHHHHHHHHTCCCCS
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHccc--------CHHHHHHHHHHHHHHhcccc
Confidence 44457889999999999999999886432 23321 1222333444444 799999999998874322 2
Q ss_pred C----HHHHHHHHHHHHhCCCHHHHHHHHHHhHh---hc-CCCCCh-hhHHHHHHHHHHcCCHHHHHHHHHHHHH----C
Q 010790 100 N----EASVTSVARLAASKNDGDYAFVLIKRMNN---EF-NVVPRL-RTYDPALFCFCENLEAEKAYEVEEHMGL----M 166 (501)
Q Consensus 100 d----~~t~~~li~~~~~~g~~~~A~~l~~~M~~---~~-gi~P~~-~ty~~lI~~~~~~g~~~~A~~lf~~M~~----~ 166 (501)
+ ..+++.+-..|...|+.++|...|++... .. +..|.. .+|..+-..|.+.|+.++|...+++... .
T Consensus 150 ~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~~~~~~ 229 (293)
T 3u3w_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHc
Confidence 3 33699999999999999999999998831 11 222222 4788888999999999999999987653 2
Q ss_pred CCCCC-HHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Q 010790 167 GLSLE-QQEIAALLKVSAETGR-VEKVYQYLQKLR 199 (501)
Q Consensus 167 gv~pd-~~t~~~Li~~~~~~g~-~~~a~~ll~~M~ 199 (501)
+..+. ..+|..+-..|.+.|+ .++|.+.+++..
T Consensus 230 ~~~~~~~~~~~~lg~~~~~~g~~~~~A~~~~~~Al 264 (293)
T 3u3w_A 230 NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp TBCTTHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHH
Confidence 32333 5688888899999995 599999888754
No 72
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=97.71 E-value=0.0024 Score=56.29 Aligned_cols=133 Identities=11% Similarity=0.034 Sum_probs=107.4
Q ss_pred CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC
Q 010790 57 SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136 (501)
Q Consensus 57 ~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~ 136 (501)
++..|..|=..+...| ++++|++.|++..+... -+..++..+...|.+.|++++|...+... ....- -+
T Consensus 4 ~~~iy~~lG~~~~~~g--------~~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~~~~~~a~~~~~~~-~~~~~-~~ 72 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKG--------DFDGAIRAYKKVLKADP-NNVETLLKLGKTYMDIGLPNDAIESLKKF-VVLDT-TS 72 (184)
T ss_dssp CHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHCC-CC
T ss_pred HHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHCCCHHHHHHHHHHH-HhcCc-hh
Confidence 4456777766777777 89999999999877532 36788999999999999999999999998 44322 34
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
...+..+-..+...++.+.|...+....... .-+...+..+-..|.+.|+.++|++.|++..+.
T Consensus 73 ~~~~~~~~~~~~~~~~~~~a~~~~~~a~~~~-~~~~~~~~~lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 73 AEAYYILGSANFMIDEKQAAIDALQRAIALN-TVYADAYYKLGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-ccchHHHHHHHHHHHHhCCchhHHHHHHHHHHh
Confidence 5667777778889999999999999887653 236778999999999999999999999987764
No 73
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=97.71 E-value=0.0032 Score=60.53 Aligned_cols=166 Identities=7% Similarity=-0.099 Sum_probs=118.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHH-----HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC---
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLH-----HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV--- 97 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~-----ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~--- 97 (501)
+...+..+...|+.++|++.+.+..+..-..... .+..+-..+...+ ++++|...|.+......
T Consensus 78 l~~~~~~~~~~~~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~al~~~~~~~ 149 (293)
T 2qfc_A 78 FKDQVIMLCKQKRYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKV--------DYEYCILELKKLLNQQLTGI 149 (293)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSS--------CHHHHHHHHHHHHTTCCCSS
T ss_pred HHHHHHHHHHhhhHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCC--------CHHHHHHHHHHHHHHHhcCC
Confidence 4456778899999999999999877654322111 1112222444555 79999999998875322
Q ss_pred CCC--HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC----
Q 010790 98 IPN--EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-----LRTYDPALFCFCENLEAEKAYEVEEHMGLM---- 166 (501)
Q Consensus 98 ~pd--~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~---- 166 (501)
.+. ..+|+.+-..|...|++++|...|++........|+ ..+|+.+-..|.+.|+.++|...|++....
T Consensus 150 ~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~~~~~~ 229 (293)
T 2qfc_A 150 DVYQNLYIENAIANIYAENGYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIEISCRI 229 (293)
T ss_dssp CTTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 122 458999999999999999999999987311111233 258888889999999999999999886542
Q ss_pred CCCC-CHHHHHHHHHHHHhcCChHHH-HHHHHHHH
Q 010790 167 GLSL-EQQEIAALLKVSAETGRVEKV-YQYLQKLR 199 (501)
Q Consensus 167 gv~p-d~~t~~~Li~~~~~~g~~~~a-~~ll~~M~ 199 (501)
+... -..+|..+-..|.+.|+.++| ...+++-.
T Consensus 230 ~~~~~~~~~~~~lg~~y~~~g~~~~Ai~~~~~~Al 264 (293)
T 2qfc_A 230 NSMALIGQLYYQRGECLRKLEYEEAEIEDAYKKAS 264 (293)
T ss_dssp TBCSSHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 2111 156788899999999999999 77676643
No 74
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.67 E-value=0.0025 Score=57.51 Aligned_cols=126 Identities=11% Similarity=-0.021 Sum_probs=74.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHH
Q 010790 27 LINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTS 106 (501)
Q Consensus 27 n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~ 106 (501)
..+-..+.+.|++++|+..|++. +.|+...|..+-..+...+ ++++|...|++..... +.+...+..
T Consensus 10 ~~~g~~~~~~~~~~~A~~~~~~a----~~~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-~~~~~~~~~ 76 (213)
T 1hh8_A 10 WNEGVLAADKKDWKGALDAFSAV----QDPHSRICFNIGCMYTILK--------NMTEAEKAFTRSINRD-KHLAVAYFQ 76 (213)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHTS----SSCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHH----cCCChHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-ccchHHHHH
Confidence 34445566667777777777654 3445566666655555555 6777777777665532 234556666
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHhhcC--------------CCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 107 VARLAASKNDGDYAFVLIKRMNNEFN--------------VVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 107 li~~~~~~g~~~~A~~l~~~M~~~~g--------------i~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
+...|...|+.++|...|++. .... ..| ....+..+-..|.+.|+.++|.+.|+.....
T Consensus 77 lg~~~~~~~~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 150 (213)
T 1hh8_A 77 RGMLYYQTEKYDLAIKDLKEA-LIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSM 150 (213)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHcccHHHHHHHHHHH-HHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 677777777777777777666 3311 001 1144555555666666666666666665543
No 75
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=97.66 E-value=0.00055 Score=60.52 Aligned_cols=163 Identities=7% Similarity=0.031 Sum_probs=116.4
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+-..+.+.|++++|+..|++..+.. +-+...+..+-..+...| ++++|...|+...... |+...
T Consensus 7 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g--------~~~~A~~~~~~a~~~~--p~~~~ 75 (176)
T 2r5s_A 7 EQLLKQVSELLQQGEHAQALNVIQTLSDEL-QSRGDVKLAKADCLLETK--------QFELAQELLATIPLEY--QDNSY 75 (176)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHHTSCHHH-HTSHHHHHHHHHHHHHTT--------CHHHHHHHHTTCCGGG--CCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHCC--------CHHHHHHHHHHhhhcc--CChHH
Confidence 355666778899999999999999866432 123456666666777777 8999999999875532 34433
Q ss_pred HHHHHHH-HHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHH
Q 010790 104 VTSVARL-AASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL-EQQEIAALLK 180 (501)
Q Consensus 104 ~~~li~~-~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p-d~~t~~~Li~ 180 (501)
+..+... +...+...+|...|++. .. ..| +...+..+-..|...|+.++|...|+++....-.+ +...+..|..
T Consensus 76 ~~~~~~~~~~~~~~~~~a~~~~~~a-l~--~~P~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~~p~~~~~~a~~~l~~ 152 (176)
T 2r5s_A 76 KSLIAKLELHQQAAESPELKRLEQE-LA--ANPDNFELACELAVQYNQVGRDEEALELLWNILKVNLGAQDGEVKKTFMD 152 (176)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHHH-HH--HSTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCTTTTTTHHHHHHHH
T ss_pred HHHHHHHHHHhhcccchHHHHHHHH-HH--hCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHhCcccChHHHHHHHHH
Confidence 3322212 12222334577888877 33 235 46788888889999999999999999998764322 3568999999
Q ss_pred HHHhcCChHHHHHHHHHHHh
Q 010790 181 VSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~M~~ 200 (501)
.+...|+.++|...|++...
T Consensus 153 ~~~~~g~~~~A~~~y~~al~ 172 (176)
T 2r5s_A 153 ILSALGQGNAIASKYRRQLY 172 (176)
T ss_dssp HHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHhCCCCcHHHHHHHHHH
Confidence 99999999999999987543
No 76
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.66 E-value=0.0023 Score=51.48 Aligned_cols=96 Identities=11% Similarity=0.061 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
.++..+...+...|++++|..+|+++ .... +.+..++..+...|.+.|+.++|..+|+++.... ..+...|..+...
T Consensus 10 ~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~ 86 (125)
T 1na0_A 10 EAWYNLGNAYYKQGDYDEAIEYYQKA-LELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNA 86 (125)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-HHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHH
Confidence 34455555555555555555555555 2221 1234455555555555555555555555554432 1244455555555
Q ss_pred HHhcCChHHHHHHHHHHHh
Q 010790 182 SAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~ 200 (501)
|.+.|+.++|...|+++..
T Consensus 87 ~~~~~~~~~A~~~~~~~~~ 105 (125)
T 1na0_A 87 YYKQGDYDEAIEYYQKALE 105 (125)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHH
Confidence 5555555555555555543
No 77
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=97.63 E-value=0.0013 Score=52.99 Aligned_cols=103 Identities=10% Similarity=0.041 Sum_probs=80.2
Q ss_pred CChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHH
Q 010790 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKA 156 (501)
Q Consensus 77 ~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A 156 (501)
...+++++|.++|+++.... +.+..++..+...+...|++++|..+|+++ .... +.+..++..+...|...|+.++|
T Consensus 20 ~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~la~~~~~~~~~~~A 96 (125)
T 1na0_A 20 YKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKA-LELD-PNNAEAWYNLGNAYYKQGDYDEA 96 (125)
T ss_dssp HHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHH
T ss_pred HHcCCHHHHHHHHHHHHHHC-cCcHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHhC-CccHHHHHHHHHHHHHhcCHHHH
Confidence 35678999999999988753 346788999999999999999999999998 4432 24678888999999999999999
Q ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 157 YEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 157 ~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
...|+++....- .+...+..+-..+.
T Consensus 97 ~~~~~~~~~~~~-~~~~~~~~l~~~~~ 122 (125)
T 1na0_A 97 IEYYQKALELDP-NNAEAKQNLGNAKQ 122 (125)
T ss_dssp HHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCC-CcHHHHHHHHHHHH
Confidence 999999876532 24445555544443
No 78
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=97.59 E-value=0.0035 Score=57.41 Aligned_cols=136 Identities=6% Similarity=-0.101 Sum_probs=107.3
Q ss_pred CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC
Q 010790 57 SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136 (501)
Q Consensus 57 ~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~ 136 (501)
|+..+..+-..+...+ ++++|...|++..+....++...+..+...+...|++++|...|++. ... .|+
T Consensus 6 ~~~~~~~~g~~~~~~~--------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-l~~--~p~ 74 (228)
T 4i17_A 6 DPNQLKNEGNDALNAK--------NYAVAFEKYSEYLKLTNNQDSVTAYNCGVCADNIKKYKEAADYFDIA-IKK--NYN 74 (228)
T ss_dssp CHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHT--TCS
T ss_pred CHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHhccCCCCcHHHHHHHHHHHHhhcHHHHHHHHHHH-HHh--Ccc
Confidence 4445555544566666 89999999999888665578888888999999999999999999998 433 344
Q ss_pred -hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCH-------HHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC
Q 010790 137 -LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQ-------QEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN 206 (501)
Q Consensus 137 -~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~-------~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~ 206 (501)
...|..+-..|...|+.++|...|++.....- .+. ..|..+-..+...|+.++|...|++..+. .|+
T Consensus 75 ~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~--~p~ 149 (228)
T 4i17_A 75 LANAYIGKSAAYRDMKNNQEYIATLTEGIKAVP-GNATIEKLYAIYYLKEGQKFQQAGNIEKAEENYKHATDV--TSK 149 (228)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTTS--SCH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHHCC-CcHHHHHHHHHHHHHHhHHHHHhccHHHHHHHHHHHHhc--CCC
Confidence 46788888899999999999999999876531 133 45777778888999999999999998754 555
No 79
>2h6f_A Protein farnesyltransferase/geranylgeranyltransferase type I alpha subunit; ftase, farnesyltransferase, farnesyl transferase, prenyltransferase, CAAX, RAS, lipid modification, prenylation; HET: SUC FAR; 1.50A {Homo sapiens} SCOP: a.118.6.1 PDB: 1jcq_A* 1ld7_A* 1mzc_A* 1s63_A* 1sa4_A* 1tn6_A* 1ld8_A* 2h6g_A* 2h6h_A* 2h6i_A* 2iej_A* 3e37_A* 2f0y_A* 3ksl_A* 2zir_A* 2zis_A* 1o5m_A* 3ksq_A* 1o1t_A* 1o1s_A* ...
Probab=97.59 E-value=0.003 Score=63.80 Aligned_cols=178 Identities=8% Similarity=0.044 Sum_probs=134.7
Q ss_pred hHHHHHHHHHHhcCC-HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 24 TNFLINLQSCTKSKD-LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~-~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
..|+.+-..+.+.|+ +++|+..|+++.+..- -+...|+.+-.++...+ ++++|+..|++..+... -+..
T Consensus 132 ~a~~~~g~~l~~~g~d~~eAl~~~~~al~l~P-~~~~a~~~~g~~~~~~g--------~~~eAl~~~~kal~ldP-~~~~ 201 (382)
T 2h6f_A 132 TVWHFRRVLLKSLQKDLHEEMNYITAIIEEQP-KNYQVWHHRRVLVEWLR--------DPSQELEFIADILNQDA-KNYH 201 (382)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHT--------CCTTHHHHHHHHHHHCT-TCHH
T ss_pred HHHHHHHHHHHHcccCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHHhCc-cCHH
Confidence 477888888999996 9999999999887542 24566777766777666 78999999999987532 3788
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH-cCCHHHH-----HHHHHHHHHCCCCCCHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE-NLEAEKA-----YEVEEHMGLMGLSLEQQEIA 176 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~-~g~~~~A-----~~lf~~M~~~gv~pd~~t~~ 176 (501)
.|..+-.++...|++++|+..|+++ ....- -+...|+.+-..|.+ .|..++| ...|+......- -+...|+
T Consensus 202 a~~~lg~~~~~~g~~~eAl~~~~~a-l~l~P-~~~~a~~~lg~~l~~l~~~~~eA~~~~el~~~~~Al~l~P-~~~~a~~ 278 (382)
T 2h6f_A 202 AWQHRQWVIQEFKLWDNELQYVDQL-LKEDV-RNNSVWNQRYFVISNTTGYNDRAVLEREVQYTLEMIKLVP-HNESAWN 278 (382)
T ss_dssp HHHHHHHHHHHHTCCTTHHHHHHHH-HHHCT-TCHHHHHHHHHHHHHTTCSCSHHHHHHHHHHHHHHHHHST-TCHHHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHH-HHhCC-CCHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHHHHCC-CCHHHHH
Confidence 9999999999999999999999999 44322 356788888888888 6665777 477877766432 2567899
Q ss_pred HHHHHHHhcC--ChHHHHHHHHHHHhCCCCCCHH-HHHHHHHHh
Q 010790 177 ALLKVSAETG--RVEKVYQYLQKLRSTVRCVNEE-TGKIIEDWF 217 (501)
Q Consensus 177 ~Li~~~~~~g--~~~~a~~ll~~M~~~~~~p~~~-t~~~i~~~f 217 (501)
.+...+.+.| +.++|++.+.++ ...|+.. .+..+...+
T Consensus 279 ~l~~ll~~~g~~~~~~a~~~~~~~---~~~p~~~~al~~La~~~ 319 (382)
T 2h6f_A 279 YLKGILQDRGLSKYPNLLNQLLDL---QPSHSSPYLIAFLVDIY 319 (382)
T ss_dssp HHHHHHTTTCGGGCHHHHHHHHHH---TTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHccCccchHHHHHHHHHh---ccCCCCHHHHHHHHHHH
Confidence 9999998888 589999999887 3345443 334443333
No 80
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=97.55 E-value=0.0066 Score=54.62 Aligned_cols=116 Identities=9% Similarity=-0.027 Sum_probs=97.6
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
++++|.+.|++. +.|+..++..+...|...|++++|...|++. .... +.+...|..+-..|...|+.++|...|
T Consensus 21 ~~~~A~~~~~~a----~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~-~~~~~~~~~lg~~~~~~~~~~~A~~~~ 94 (213)
T 1hh8_A 21 DWKGALDAFSAV----QDPHSRICFNIGCMYTILKNMTEAEKAFTRS-INRD-KHLAVAYFQRGMLYYQTEKYDLAIKDL 94 (213)
T ss_dssp CHHHHHHHHHTS----SSCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHH----cCCChHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-ccchHHHHHHHHHHHHcccHHHHHHHH
Confidence 799999999876 4678999999999999999999999999998 4432 245678888899999999999999999
Q ss_pred HHHHHCCC--------------CC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 010790 161 EHMGLMGL--------------SL-EQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 161 ~~M~~~gv--------------~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~ 202 (501)
+......- .| ....|..+-..|.+.|+.++|...|++.....
T Consensus 95 ~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~ 151 (213)
T 1hh8_A 95 KEALIQLRGNQLIDYKILGLQFKLFACEVLYNIAFMYAKKEEWKKAEEQLALATSMK 151 (213)
T ss_dssp HHHHHTTTTCSEEECGGGTBCCEEEHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHhCCCccHHHHHHhccccCccchHHHHHHHHHHHHccCHHHHHHHHHHHHHcC
Confidence 99887421 11 22678889999999999999999999987653
No 81
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.54 E-value=0.0013 Score=65.60 Aligned_cols=162 Identities=11% Similarity=0.008 Sum_probs=118.8
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCC-CCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC-CC-----
Q 010790 31 QSCTKSKDLTTAISLYESAHSQNL-RLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV-IP----- 99 (501)
Q Consensus 31 ~~~~k~g~~~~A~~lf~~m~~~gv-~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~-~p----- 99 (501)
..+...|++++|+..|++..+.-- .++ ..+|..+-..+...+ +.++|...+.+..+... .+
T Consensus 111 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~~--------~~~~A~~~~~~al~~~~~~~~~~~~ 182 (383)
T 3ulq_A 111 MYELDQREYLSAIKFFKKAESKLIFVKDRIEKAEFFFKMSESYYYMK--------QTYFSMDYARQAYEIYKEHEAYNIR 182 (383)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHTCSTTHHH
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHhCccchHH
Confidence 456788999999999999876411 122 234555555667777 89999999888665211 11
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh----hhHHHHHHHHHHcCCHHHHHHHHHHHHHC----CC-CC
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----RTYDPALFCFCENLEAEKAYEVEEHMGLM----GL-SL 170 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~~~~~g~~~~A~~lf~~M~~~----gv-~p 170 (501)
...+++.+-..|...|++++|...|++......-.++. .+|..+=..|...|+.++|...|++.... +. ..
T Consensus 183 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g~~~~A~~~~~~al~~~~~~~~~~~ 262 (383)
T 3ulq_A 183 LLQCHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNILPS 262 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCGGG
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhccchh
Confidence 24578888899999999999999998872211111222 47888888999999999999999987662 22 33
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 171 EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 171 d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
...++..|-..|.+.|+.++|...+++...
T Consensus 263 ~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 292 (383)
T 3ulq_A 263 LPQAYFLITQIHYKLGKIDKAHEYHSKGMA 292 (383)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 456789999999999999999999988654
No 82
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=97.51 E-value=0.0016 Score=62.69 Aligned_cols=164 Identities=9% Similarity=0.026 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhC-CCCCCCChhhHHHHHHHHHHHHhC--
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDS-ATDPSSKDSALRHGFRVFDQMLSN-- 95 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~-~~~~~~k~~~~~~a~~lf~~M~~~-- 95 (501)
..|+.+-..|.+.|++++|+..|++..+. |-... ..+++.+-..+... + ++++|+..|++....
T Consensus 78 ~~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~~lg--------~~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 78 NTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQFRRGANFKFELGEILENDLH--------DYAKAIDCYELAGEWYA 149 (292)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--------CHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhc--------CHHHHHHHHHHHHHHHH
Confidence 37888889999999999999999987642 21111 24566666677774 7 899999999987652
Q ss_pred --CCCCC-HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh------hHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 96 --NVIPN-EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR------TYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 96 --g~~pd-~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~------ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
+..+. ..+++.+...|.+.|++++|...|++. .......... +|..+-.+|...|+.+.|...|++....
T Consensus 150 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l 228 (292)
T 1qqe_A 150 QDQSVALSNKCFIKCADLKALDGQYIEASDIYSKL-IKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSE 228 (292)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC
T ss_pred hCCChHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHhcCCcccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 11111 356888999999999999999999998 5432221111 4677777888999999999999987542
Q ss_pred CCCCCH------HHHHHHHHHHH--hcCChHHHHHHHHHH
Q 010790 167 GLSLEQ------QEIAALLKVSA--ETGRVEKVYQYLQKL 198 (501)
Q Consensus 167 gv~pd~------~t~~~Li~~~~--~~g~~~~a~~ll~~M 198 (501)
.|+. ..+..|+.+|. ..+.+++|+..|+.+
T Consensus 229 --~p~~~~~~~~~~l~~l~~~~~~~~~~~~~~A~~~~~~~ 266 (292)
T 1qqe_A 229 --DPNFADSRESNFLKSLIDAVNEGDSEQLSEHCKEFDNF 266 (292)
T ss_dssp -----------HHHHHHHHHHHHTTCTTTHHHHHHHHTTS
T ss_pred --CCCCCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHhccC
Confidence 3322 23455666664 245677777776553
No 83
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=97.50 E-value=0.0012 Score=58.85 Aligned_cols=158 Identities=9% Similarity=-0.048 Sum_probs=108.5
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHh----CCCC-CCHHHHHHHH
Q 010790 34 TKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS----NNVI-PNEASVTSVA 108 (501)
Q Consensus 34 ~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~----~g~~-pd~~t~~~li 108 (501)
...|++++|.++++.+.. ........+..+-..+...+ ++++|...|++... .+.. ....+++.+-
T Consensus 3 ~~~g~~~~A~~~~~~~~~-~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~ 73 (203)
T 3gw4_A 3 FEAHDYALAERQAQALLA-HPATASGARFMLGYVYAFMD--------RFDEARASFQALQQQAQKSGDHTAEHRALHQVG 73 (203)
T ss_dssp ----CHHHHHHHHHHHHT-STTTHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHH
Confidence 467999999995555433 11223456666666777777 89999999988765 2222 2356788888
Q ss_pred HHHHhCCCHHHHHHHHHHhHhhcCCCC-C----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCC-CCHHHHHHH
Q 010790 109 RLAASKNDGDYAFVLIKRMNNEFNVVP-R----LRTYDPALFCFCENLEAEKAYEVEEHMGLM----GLS-LEQQEIAAL 178 (501)
Q Consensus 109 ~~~~~~g~~~~A~~l~~~M~~~~gi~P-~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~----gv~-pd~~t~~~L 178 (501)
..|...|++++|...+.+......-.+ + ...+..+-..|...|++++|...+++.... +-. .-..++..+
T Consensus 74 ~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l 153 (203)
T 3gw4_A 74 MVERMAGNWDAARRCFLEERELLASLPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGL 153 (203)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 899999999999999987622211112 2 345777778888999999999999887532 211 112346778
Q ss_pred HHHHHhcCChHHHHHHHHHHHh
Q 010790 179 LKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 179 i~~~~~~g~~~~a~~ll~~M~~ 200 (501)
-..+...|+.++|...+++...
T Consensus 154 a~~~~~~g~~~~A~~~~~~al~ 175 (203)
T 3gw4_A 154 GDLAQQEKNLLEAQQHWLRARD 175 (203)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCcCHHHHHHHHHHHHH
Confidence 8889999999999999987654
No 84
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.49 E-value=0.01 Score=68.33 Aligned_cols=133 Identities=8% Similarity=0.033 Sum_probs=78.1
Q ss_pred hcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC
Q 010790 35 KSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASK 114 (501)
Q Consensus 35 k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~ 114 (501)
..+++++|.++.++.. +..+|..+=.++...| ++++|.+-|.+- -|...|.-++..|.+.
T Consensus 1088 ~i~nldrAiE~Aervn------~p~vWsqLAKAql~~G--------~~kEAIdsYiKA------dD~say~eVa~~~~~l 1147 (1630)
T 1xi4_A 1088 HIGNLDRAYEFAERCN------EPAVWSQLAKAQLQKG--------MVKEAIDSYIKA------DDPSSYMEVVQAANTS 1147 (1630)
T ss_pred HHhhHHHHHHHHHhcC------CHHHHHHHHHHHHhCC--------CHHHHHHHHHhc------CChHHHHHHHHHHHHc
Confidence 5566777777666431 2355655555666666 677777776442 3555666677777777
Q ss_pred CCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHH
Q 010790 115 NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQY 194 (501)
Q Consensus 115 g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~l 194 (501)
|++++|.+.|... ++.. ++....+.+..+|++.++++...... . .++...|..+-..|...|++++|..+
T Consensus 1148 GkyEEAIeyL~mA-rk~~--~e~~Idt~LafaYAKl~rleele~fI----~---~~n~ad~~~iGd~le~eg~YeeA~~~ 1217 (1630)
T 1xi4_A 1148 GNWEELVKYLQMA-RKKA--RESYVETELIFALAKTNRLAELEEFI----N---GPNNAHIQQVGDRCYDEKMYDAAKLL 1217 (1630)
T ss_pred CCHHHHHHHHHHH-Hhhc--ccccccHHHHHHHHhhcCHHHHHHHH----h---CCCHHHHHHHHHHHHhcCCHHHHHHH
Confidence 7777777777655 3322 33333334666777776666422221 1 23445566666666666777777666
Q ss_pred HHH
Q 010790 195 LQK 197 (501)
Q Consensus 195 l~~ 197 (501)
|..
T Consensus 1218 Y~k 1220 (1630)
T 1xi4_A 1218 YNN 1220 (1630)
T ss_pred HHh
Confidence 666
No 85
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=97.49 E-value=0.0021 Score=61.96 Aligned_cols=160 Identities=10% Similarity=-0.046 Sum_probs=95.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHH
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVT 105 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~ 105 (501)
+..+-..+.+.|++++|+.+|++..+.. +-+...+..|-..+...| ++++|..+|+..... .|+.....
T Consensus 120 ~~~~a~~~~~~g~~~~A~~~~~~al~~~-P~~~~a~~~la~~~~~~g--------~~~~A~~~l~~~~~~--~p~~~~~~ 188 (287)
T 3qou_A 120 XAQQAMQLMQESNYTDALPLLXDAWQLS-NQNGEIGLLLAETLIALN--------RSEDAEAVLXTIPLQ--DQDTRYQG 188 (287)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHT-TSCHHHHHHHHHHHHHTT--------CHHHHHHHHTTSCGG--GCSHHHHH
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHhC-CcchhHHHHHHHHHHHCC--------CHHHHHHHHHhCchh--hcchHHHH
Confidence 3444455667777777777777766532 113444555555666666 677777777766443 24433222
Q ss_pred HHHH-HHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHH
Q 010790 106 SVAR-LAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS-LEQQEIAALLKVSA 183 (501)
Q Consensus 106 ~li~-~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~-pd~~t~~~Li~~~~ 183 (501)
.... .+...++.++|...|++. .... +.+...+..+-..|...|+.++|...|.++....-. .+...+..|...+.
T Consensus 189 ~~~~~~l~~~~~~~~a~~~l~~a-l~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 189 LVAQIELLXQAADTPEIQQLQQQ-VAEN-PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHHHHHHTSCHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHhhcccCccHHHHHHH-HhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 2222 245566666677777666 2221 124566666667777777777777777777664211 12456777777777
Q ss_pred hcCChHHHHHHHHHH
Q 010790 184 ETGRVEKVYQYLQKL 198 (501)
Q Consensus 184 ~~g~~~~a~~ll~~M 198 (501)
..|+.++|...+++-
T Consensus 267 ~~g~~~~a~~~~r~a 281 (287)
T 3qou_A 267 ALGTGDALASXYRRQ 281 (287)
T ss_dssp HHCTTCHHHHHHHHH
T ss_pred HcCCCCcHHHHHHHH
Confidence 777777777666553
No 86
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.48 E-value=0.0037 Score=53.48 Aligned_cols=93 Identities=11% Similarity=-0.010 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..+.+.|++++|+..|++..+.. +.+...+..+-..+...+ ++++|.+.|++..... +.+..++
T Consensus 15 ~~~~~a~~~~~~~~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~a~~~~-~~~~~~~ 84 (166)
T 1a17_A 15 ELKTQANDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTE--------CYGYALGDATRAIELD-KKYIKGY 84 (166)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-cccHHHH
Confidence 44555555666666666666666655432 113344444444444444 5555666555554432 1234455
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M 127 (501)
..+...+...|+.++|...|++.
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a 107 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETV 107 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHH
Confidence 55555555555555555555555
No 87
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.47 E-value=0.0007 Score=67.88 Aligned_cols=168 Identities=10% Similarity=-0.091 Sum_probs=119.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHhCCCCCCCChhh-----------------H
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRL-SLHHFNALLYLCSDSATDPSSKDSA-----------------L 82 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~-----------------~ 82 (501)
.+..+-..|...|++++|+..|+++.+. +-.| ...++..+-..+...+ + +
T Consensus 128 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 128 SSGNLGNTLKVMGRFDEAAICCERHLTLARQLGDRLSEGRALYNLGNVYHAKG--------KHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH--------HHHHHHSTTCCCHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHcC--------cccccccchhhhhhhhHHH
Confidence 6777888888999999999999886643 1111 1234444544555555 7 8
Q ss_pred HHHHHHHHHHHhC----CCC-CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHcCCH
Q 010790 83 RHGFRVFDQMLSN----NVI-PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCENLEA 153 (501)
Q Consensus 83 ~~a~~lf~~M~~~----g~~-pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~g~~ 153 (501)
++|.+.|++.... +.. ....++..+...|...|++++|...|++......-.++ ..++..+-..|...|+.
T Consensus 200 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~ 279 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLRIAREFGDRAAERRANSNLGNSHIFLGQF 279 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTTCH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHCcCH
Confidence 8898888876441 111 12357888899999999999999999887221110112 23788888899999999
Q ss_pred HHHHHHHHHHHHCC----CC-CCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 154 EKAYEVEEHMGLMG----LS-LEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 154 ~~A~~lf~~M~~~g----v~-pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
++|...|++..... -. ....++..+...|...|+.++|...|++...
T Consensus 280 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 331 (411)
T 4a1s_A 280 EDAAEHYKRTLALAVELGEREVEAQSCYSLGNTYTLLHEFNTAIEYHNRHLA 331 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99999998875431 10 1246788888999999999999999988644
No 88
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.46 E-value=0.0017 Score=62.11 Aligned_cols=167 Identities=11% Similarity=-0.007 Sum_probs=121.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----C
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN----N 96 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~----g 96 (501)
.+...-..+.+.|++++|+.+|+++.+... .+ ...+..+-..+...+ ++++|.+.|++.... +
T Consensus 7 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~~~~~ 77 (338)
T 3ro2_A 7 ELALEGERLCKSGDCRAGVSFFEAAVQVGT-EDLKTLSAIYSQLGNAYFYLH--------DYAKALEYHHHDLTLARTIG 77 (338)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhCc-ccHHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHhhccc
Confidence 344555678899999999999999887532 23 245556656777777 899999999886542 2
Q ss_pred CCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHcCC-------------------
Q 010790 97 VIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCENLE------------------- 152 (501)
Q Consensus 97 ~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~g~------------------- 152 (501)
..| ...++..+...|...|++++|...+.+......-.++ ..++..+-..|...|+
T Consensus 78 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 157 (338)
T 3ro2_A 78 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRN 157 (338)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTSSSSSCC----CCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHcCcccccchhhhhhhhhhhHHH
Confidence 222 3567888899999999999999999886221111122 3478888888999999
Q ss_pred -HHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 153 -AEKAYEVEEHMGLM----GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 153 -~~~A~~lf~~M~~~----gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
++.|...+++.... +-.+ ....+..+...|...|+.++|...+.+...
T Consensus 158 ~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 211 (338)
T 3ro2_A 158 ALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLL 211 (338)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999998876432 1111 234788888889999999999999988754
No 89
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=97.46 E-value=0.0013 Score=63.94 Aligned_cols=165 Identities=9% Similarity=0.021 Sum_probs=118.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.|+.....|...|++++|...|.+..+. +-.+. ..+|+.+-..+...+ ++++|+..|++-.+.
T Consensus 38 ~~~~a~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~~~~~g--------~~~~A~~~~~~Al~l~~~~ 109 (307)
T 2ifu_A 38 EYAKAAVAFKNAKQLEQAKDAYLQEAEAHANNRSLFHAAKAFEQAGMMLKDLQ--------RMPEAVQYIEKASVMYVEN 109 (307)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CGGGGHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCC--------CHHHHHHHHHHHHHHHHHc
Confidence 7888888999999999999999987643 21111 346666666777776 677788877765432
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc----CCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC---
Q 010790 96 NVIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNEF----NVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLM--- 166 (501)
Q Consensus 96 g~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~----gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~--- 166 (501)
|-.. -..+++.+-..|.. |++++|+..|++. ... +-.+ ...+++.+-..|.+.|+.++|...|++....
T Consensus 110 g~~~~~a~~~~~lg~~~~~-g~~~~A~~~~~~A-l~~~~~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~ 187 (307)
T 2ifu_A 110 GTPDTAAMALDRAGKLMEP-LDLSKAVHLYQQA-AAVFENEERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKE 187 (307)
T ss_dssp TCHHHHHHHHHHHHHHHTT-TCHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHc-CCHHHHHHHHHHH-HHHHHhCCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 2111 13577888888888 9999999999876 321 1100 1367888888999999999999999987653
Q ss_pred -CCCCCH-HHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010790 167 -GLSLEQ-QEIAALLKVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 167 -gv~pd~-~t~~~Li~~~~~~g~~~~a~~ll~~M~ 199 (501)
+..+.. ..+..+...+...|+.++|...|++..
T Consensus 188 ~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al 222 (307)
T 2ifu_A 188 MENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY 222 (307)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT
T ss_pred cCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh
Confidence 222222 266777777888899999999999876
No 90
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=97.44 E-value=0.03 Score=50.94 Aligned_cols=166 Identities=11% Similarity=-0.022 Sum_probs=125.1
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...+..+=..|...++.++|+..|.+..+.|. ...+..|=..+...+. ..+.++|++.|+.-.+.| +..
T Consensus 18 ~~a~~~lg~~~~~~~~~~~A~~~~~~a~~~g~---~~a~~~lg~~y~~~g~-----~~~~~~A~~~~~~A~~~g---~~~ 86 (212)
T 3rjv_A 18 RRAQYYLADTWVSSGDYQKAEYWAQKAAAQGD---GDALALLAQLKIRNPQ-----QADYPQARQLAEKAVEAG---SKS 86 (212)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHTTC---HHHHHHHHHHTTSSTT-----SCCHHHHHHHHHHHHHTT---CHH
T ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHHHHHcCC---HHHHHHHHHHHHcCCC-----CCCHHHHHHHHHHHHHCC---CHH
Confidence 34556666778889999999999999988874 4455544444444321 116899999999987765 566
Q ss_pred HHHHHHHHHHh----CCCHHHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCC
Q 010790 103 SVTSVARLAAS----KNDGDYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLSLE 171 (501)
Q Consensus 103 t~~~li~~~~~----~g~~~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~pd 171 (501)
++..|-..|.. .++.++|+.+|.+. .+.+ |+ ...+..|=..|.. .++.++|...|+...+. ..+
T Consensus 87 a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A-~~~~--~~~~~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~--~~~ 161 (212)
T 3rjv_A 87 GEIVLARVLVNRQAGATDVAHAITLLQDA-ARDS--ESDAAVDAQMLLGLIYASGVHGPEDDVKASEYFKGSSSL--SRT 161 (212)
T ss_dssp HHHHHHHHHTCGGGSSCCHHHHHHHHHHH-TSST--TSHHHHHHHHHHHHHHHHTSSSSCCHHHHHHHHHHHHHT--SCT
T ss_pred HHHHHHHHHHcCCCCccCHHHHHHHHHHH-HHcC--CCcchHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHc--CCC
Confidence 77788888877 88999999999998 5543 33 6778888888888 78999999999998876 224
Q ss_pred HHHHHHHHHHHHhc-C-----ChHHHHHHHHHHHhCCCC
Q 010790 172 QQEIAALLKVSAET-G-----RVEKVYQYLQKLRSTVRC 204 (501)
Q Consensus 172 ~~t~~~Li~~~~~~-g-----~~~~a~~ll~~M~~~~~~ 204 (501)
...+..|-..|... | +.++|+.+|++-.+.|..
T Consensus 162 ~~a~~~Lg~~y~~g~gg~~~~d~~~A~~~~~~A~~~g~~ 200 (212)
T 3rjv_A 162 GYAEYWAGMMFQQGEKGFIEPNKQKALHWLNVSCLEGFD 200 (212)
T ss_dssp THHHHHHHHHHHHCBTTTBCCCHHHHHHHHHHHHHHTCH
T ss_pred HHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHcCCH
Confidence 45677777777653 3 899999999998877643
No 91
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=97.44 E-value=0.0068 Score=55.06 Aligned_cols=165 Identities=13% Similarity=0.108 Sum_probs=113.5
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhCCCCCC-HHHHHH----------------HHHHHHhCCCCCCCChhhHHHHHHHHHH
Q 010790 29 NLQSCTKSKDLTTAISLYESAHSQNLRLS-LHHFNA----------------LLYLCSDSATDPSSKDSALRHGFRVFDQ 91 (501)
Q Consensus 29 lI~~~~k~g~~~~A~~lf~~m~~~gv~p~-~~ty~~----------------LL~~c~~~~~~~~~k~~~~~~a~~lf~~ 91 (501)
.-..+.+.|++++|+..|++..+.. |+ ...|.. +-..+...+ ++++|...|++
T Consensus 10 ~g~~~~~~g~~~~A~~~~~~al~~~--p~~~~~~~~~~~~~~~~~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~ 79 (208)
T 3urz_A 10 KVSAAIEAGQNGQAVSYFRQTIALN--IDRTEMYYWTNVDKNSEISSKLATELALAYKKNR--------NYDKAYLFYKE 79 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC--HHHHHHHHHHHSCTTSHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHhC--CCChHHHHHhhhcchhhhhHHHHHHHHHHHHHCC--------CHHHHHHHHHH
Confidence 3345678899999999999987643 32 233333 444666777 89999999999
Q ss_pred HHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCC--HHHHHHHHHHHHHCCC
Q 010790 92 MLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLE--AEKAYEVEEHMGLMGL 168 (501)
Q Consensus 92 M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~--~~~A~~lf~~M~~~gv 168 (501)
..+.. +-+...+..+-..|...|++++|...|++. ... .| +..+|..+-..|...|+ .+.+...|....
T Consensus 80 al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~--~P~~~~a~~~lg~~~~~~~~~~~~~~~~~~~~~~---- 151 (208)
T 3urz_A 80 LLQKA-PNNVDCLEACAEMQVCRGQEKDALRMYEKI-LQL--EADNLAANIFLGNYYYLTAEQEKKKLETDYKKLS---- 151 (208)
T ss_dssp HHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHc--CCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh----
Confidence 88753 236788999999999999999999999998 442 35 45677777777766554 344555555543
Q ss_pred CCCHH--HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHH
Q 010790 169 SLEQQ--EIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213 (501)
Q Consensus 169 ~pd~~--t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i 213 (501)
.|+.. .+..+-.++...|+.++|...|++..+ +.|+......+
T Consensus 152 ~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~--l~P~~~~~~~l 196 (208)
T 3urz_A 152 SPTKMQYARYRDGLSKLFTTRYEKARNSLQKVIL--RFPSTEAQKTL 196 (208)
T ss_dssp CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTT--TSCCHHHHHHH
T ss_pred CCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCHHHHHHH
Confidence 34443 333344455568899999999998764 46776554443
No 92
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=97.44 E-value=0.00061 Score=68.36 Aligned_cols=166 Identities=10% Similarity=0.003 Sum_probs=122.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH----HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----C
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSL----HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN----N 96 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~----~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~----g 96 (501)
.+..+-..+.+.|++++|+.+|+++.+... .+. ..|..+-..+...+ ++++|...|++.... +
T Consensus 50 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~~~~~ 120 (411)
T 4a1s_A 50 ELALEGERLCNAGDCRAGVAFFQAAIQAGT-EDLRTLSAIYSQLGNAYFYLG--------DYNKAMQYHKHDLTLAKSMN 120 (411)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHhcc-cChhHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHHcc
Confidence 455666778999999999999999887632 233 34555555666666 899999999887652 2
Q ss_pred C-CCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc----CCC-CChhhHHHHHHHHHHcCC-----------------H
Q 010790 97 V-IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF----NVV-PRLRTYDPALFCFCENLE-----------------A 153 (501)
Q Consensus 97 ~-~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~----gi~-P~~~ty~~lI~~~~~~g~-----------------~ 153 (501)
. .....++..+...|...|++++|...+.+. ... +-. ....++..+-..|...|+ +
T Consensus 121 ~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~a~~~~ 199 (411)
T 4a1s_A 121 DRLGEAKSSGNLGNTLKVMGRFDEAAICCERH-LTLARQLGDRLSEGRALYNLGNVYHAKGKHLGQRNPGKFGDDVKEAL 199 (411)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCCHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHhhchHHHHHHHHHHHHHHHHcCcccccccchhhhhhhhHHH
Confidence 1 224567888999999999999999999887 322 111 123577888888999999 9
Q ss_pred HHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 154 EKAYEVEEHMGLM----GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 154 ~~A~~lf~~M~~~----gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
++|.+.|++.... +-.+ ....|..+-..|...|+.++|+..|++...
T Consensus 200 ~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 251 (411)
T 4a1s_A 200 TRAVEFYQENLKLMRDLGDRGAQGRACGNLGNTYYLLGDFQAAIEHHQERLR 251 (411)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 9999998876432 1111 234788888899999999999999988754
No 93
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=97.42 E-value=0.0073 Score=51.56 Aligned_cols=127 Identities=9% Similarity=-0.037 Sum_probs=95.2
Q ss_pred HHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhH
Q 010790 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140 (501)
Q Consensus 61 y~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty 140 (501)
+..+-..+...+ ++++|...|+...... +.+..++..+...+...|++++|...+++. .... +.+...|
T Consensus 16 ~~~~a~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~ 84 (166)
T 1a17_A 16 LKTQANDYFKAK--------DYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRA-IELD-KKYIKGY 84 (166)
T ss_dssp HHHHHHHHHHTT--------CHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHH
T ss_pred HHHHHHHHHHcc--------CHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-cccHHHH
Confidence 334444555566 7999999999987643 236788899999999999999999999988 4432 2356788
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHH--HHHHHHhcCChHHHHHHHHHHH
Q 010790 141 DPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAA--LLKVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 141 ~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~--Li~~~~~~g~~~~a~~ll~~M~ 199 (501)
..+-..|...|+.++|...|++.....- .+...+.. +...+.+.|+.++|+..+....
T Consensus 85 ~~~a~~~~~~~~~~~A~~~~~~a~~~~p-~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 144 (166)
T 1a17_A 85 YRRAASNMALGKFRAALRDYETVVKVKP-HDKDAKMKYQECNKIVKQKAFERAIAGDEHKR 144 (166)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHHHHHHHHHHHHcccchH
Confidence 8888899999999999999999876532 24445533 3344777889999998887753
No 94
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.42 E-value=0.009 Score=59.49 Aligned_cols=161 Identities=11% Similarity=-0.029 Sum_probs=118.0
Q ss_pred HHHhcCCHHHHHHHHHHHHhCCC-CCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----C-CCC-C
Q 010790 32 SCTKSKDLTTAISLYESAHSQNL-RLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN----N-VIP-N 100 (501)
Q Consensus 32 ~~~k~g~~~~A~~lf~~m~~~gv-~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~----g-~~p-d 100 (501)
.+...|+.++|+..|+++.+... .++ ..++..|-..+...+ +.+.|...+.+..+. + ..+ .
T Consensus 110 ~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~a~~~~~lg~~y~~~~--------~~~~A~~~~~~al~~~~~~~~~~~~~ 181 (378)
T 3q15_A 110 YEFDQKEYVEAIGYYREAEKELPFVSDDIEKAEFHFKVAEAYYHMK--------QTHVSMYHILQALDIYQNHPLYSIRT 181 (378)
T ss_dssp HHHHTTCHHHHHHHHHHHHTTGGGCCCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHTSTTCHHHH
T ss_pred HHHHHCCHHHHHHHHHHHHHHHhhCCChHHHHHHHHHHHHHHHHcC--------CcHHHHHHHHHHHHHHHhCCCchhhH
Confidence 35688999999999999875421 122 234444545667777 789999988876642 1 111 2
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhh---cCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHH-----CCCCCC
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNE---FNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGL-----MGLSLE 171 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~---~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~-----~gv~pd 171 (501)
..+++.+-..|...|++++|.+.|.+.... .+-.+ ...+++.+=..|...|+.++|...|++... ... ..
T Consensus 182 ~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~-~~ 260 (378)
T 3q15_A 182 IQSLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSGDDQMAVEHFQKAAKVSREKVPD-LL 260 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHCGG-GH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhhCCh-hH
Confidence 557888999999999999999999876221 11111 125677788889999999999999998876 322 23
Q ss_pred HHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 172 QQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 172 ~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..++..|-..|.+.|+.++|...+++....
T Consensus 261 ~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 290 (378)
T 3q15_A 261 PKVLFGLSWTLCKAGQTQKAFQFIEEGLDH 290 (378)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 678888999999999999999999987664
No 95
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.40 E-value=0.00085 Score=66.67 Aligned_cols=168 Identities=12% Similarity=0.003 Sum_probs=121.7
Q ss_pred HHHHHHHHHHhcCC--------------------HHHHHHHHHHHHh----CCCCCC-HHHHHHHHHHHHhCCCCCCCCh
Q 010790 25 NFLINLQSCTKSKD--------------------LTTAISLYESAHS----QNLRLS-LHHFNALLYLCSDSATDPSSKD 79 (501)
Q Consensus 25 ~~n~lI~~~~k~g~--------------------~~~A~~lf~~m~~----~gv~p~-~~ty~~LL~~c~~~~~~~~~k~ 79 (501)
.+..+-..|...|+ +++|+..|.+..+ .+-.|. ..++..+-..+...+
T Consensus 129 ~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g------- 201 (406)
T 3sf4_A 129 ALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG------- 201 (406)
T ss_dssp HHHHHHHHHHHHHHTCC-------CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHHHHcCCcccccccchhhhhhhhHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHcc-------
Confidence 67778888899999 9999999988653 222222 234555555666666
Q ss_pred hhHHHHHHHHHHHHhCCC-CCC----HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHc
Q 010790 80 SALRHGFRVFDQMLSNNV-IPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCEN 150 (501)
Q Consensus 80 ~~~~~a~~lf~~M~~~g~-~pd----~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~ 150 (501)
++++|.+.|++..+... .++ ..++..+...|...|++++|...+++......-.++ ..++..+-..|...
T Consensus 202 -~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 280 (406)
T 3sf4_A 202 -NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 280 (406)
T ss_dssp -BHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHhCcCchHHHHHHHHHHHHHHHh
Confidence 89999999998765211 122 347888999999999999999999887221100012 46788888899999
Q ss_pred CCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 151 LEAEKAYEVEEHMGLM----GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~----gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
|+.++|...|++.... +-.+ ...++..+-..|.+.|+.++|...+++...
T Consensus 281 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 335 (406)
T 3sf4_A 281 QDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 335 (406)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 9999999999887543 1111 145788888899999999999999988644
No 96
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=97.39 E-value=0.00087 Score=64.20 Aligned_cols=169 Identities=12% Similarity=-0.015 Sum_probs=121.6
Q ss_pred HHHHHHHHHHhcCC--------------------HHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhCCCCCCCCh
Q 010790 25 NFLINLQSCTKSKD--------------------LTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDSATDPSSKD 79 (501)
Q Consensus 25 ~~n~lI~~~~k~g~--------------------~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~~~~~~~k~ 79 (501)
.+..+-..|...|+ +++|+..|++..+. +-.+. ...+..+-..+...+
T Consensus 125 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~~------- 197 (338)
T 3ro2_A 125 ALYNLGNVYHAKGKSFGCPGPQDTGEFPEDVRNALQAAVDLYEENLSLVTALGDRAAQGRAFGNLGNTHYLLG------- 197 (338)
T ss_dssp HHHHHHHHHHHHHHTSSSSSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHT-------
T ss_pred HHHHHHHHHHHcCcccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhC-------
Confidence 67788888999999 99999999886532 21121 234555555666666
Q ss_pred hhHHHHHHHHHHHHhCCC-CCC----HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHc
Q 010790 80 SALRHGFRVFDQMLSNNV-IPN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCEN 150 (501)
Q Consensus 80 ~~~~~a~~lf~~M~~~g~-~pd----~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~ 150 (501)
++++|.+.|++..+... .++ ..++..+...+...|++++|...+++......-.++ ..++..+-..|...
T Consensus 198 -~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~ 276 (338)
T 3ro2_A 198 -NFRDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGNTYTLL 276 (338)
T ss_dssp -CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred -CHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHh
Confidence 79999999998764211 112 347888999999999999999999887221111112 46778888889999
Q ss_pred CCHHHHHHHHHHHHHC----CC-CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 151 LEAEKAYEVEEHMGLM----GL-SLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~----gv-~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
|+.++|...+++.... +- .....++..|...|.+.|+.++|...+++....
T Consensus 277 g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~~ 332 (338)
T 3ro2_A 277 QDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEI 332 (338)
T ss_dssp TCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred cCHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHH
Confidence 9999999999887543 11 112347888889999999999999999987654
No 97
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=97.35 E-value=0.0024 Score=63.71 Aligned_cols=164 Identities=12% Similarity=0.062 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.++.+-..|...|++++|+..|++..+. +-.+. ..++..|-..+...+ ++++|.+.|++....
T Consensus 186 ~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~g--------~~~~A~~~~~~al~~~~~~ 257 (383)
T 3ulq_A 186 CHSLFATNFLDLKQYEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQS--------QYEDAIPYFKRAIAVFEES 257 (383)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHhh
Confidence 6778888899999999999999987643 21111 235555555777777 899999999987761
Q ss_pred CC-CCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc----CCCCChhhHHHHHHHHHHcCC---HHHHHHHHHHHHHCC
Q 010790 96 NV-IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF----NVVPRLRTYDPALFCFCENLE---AEKAYEVEEHMGLMG 167 (501)
Q Consensus 96 g~-~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~----gi~P~~~ty~~lI~~~~~~g~---~~~A~~lf~~M~~~g 167 (501)
+. .....++..+...|.+.|+.++|...+++. ... +-......++.+-..|...|+ +++|..+++.. +
T Consensus 258 ~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~al~~~~~~---~ 333 (383)
T 3ulq_A 258 NILPSLPQAYFLITQIHYKLGKIDKAHEYHSKG-MAYSQKAGDVIYLSEFEFLKSLYLSGPDEEAIQGFFDFLESK---M 333 (383)
T ss_dssp TCGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHTCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHT---T
T ss_pred ccchhHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHC---c
Confidence 33 334677899999999999999999999886 321 111112335666677778888 77788887765 3
Q ss_pred CCCC-HHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 168 LSLE-QQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 168 v~pd-~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
..|+ ...+..|-..|.+.|+.++|...|++...
T Consensus 334 ~~~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 367 (383)
T 3ulq_A 334 LYADLEDFAIDVAKYYHERKNFQKASAYFLKVEQ 367 (383)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 3332 34677788899999999999999988654
No 98
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.33 E-value=0.048 Score=56.27 Aligned_cols=160 Identities=13% Similarity=-0.000 Sum_probs=79.5
Q ss_pred HHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 25 NFLINLQSCTK----SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 25 ~~n~lI~~~~k----~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
.+..+=..|.. .++.++|+..|....+.|. ...+..|=..+..+. ...++.++|.+.|.+..+.| +
T Consensus 41 a~~~lg~~y~~g~~~~~~~~~A~~~~~~a~~~~~---~~a~~~Lg~~y~~g~----g~~~~~~~A~~~~~~a~~~~---~ 110 (490)
T 2xm6_A 41 AQLELGYRYFQGNETTKDLTQAMDWFRRAAEQGY---TPAEYVLGLRYMNGE----GVPQDYAQAVIWYKKAALKG---L 110 (490)
T ss_dssp HHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC---HHHHHHHHHHHHHTS----SSCCCHHHHHHHHHHHHHTT---C
T ss_pred HHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHCCC---HHHHHHHHHHHHcCC----CCCCCHHHHHHHHHHHHHCC---C
Confidence 33333344444 5666666666666655542 233333333443310 00114566666666655543 3
Q ss_pred HHHHHHHHHHHHh----CCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCCH
Q 010790 101 EASVTSVARLAAS----KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLSLEQ 172 (501)
Q Consensus 101 ~~t~~~li~~~~~----~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~pd~ 172 (501)
...+..|-..|.. .++.++|...|+.. ...| +...+..|-..|.. .++.++|.+.|+...+.| +.
T Consensus 111 ~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a-~~~~---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a~~~~---~~ 183 (490)
T 2xm6_A 111 PQAQQNLGVMYHEGNGVKVDKAESVKWFRLA-AEQG---RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKAAEQG---NV 183 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CH
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH-HHCC---CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CH
Confidence 4444555555555 55666666666555 4432 33444444444444 455566666555555543 34
Q ss_pred HHHHHHHHHHHh----cCChHHHHHHHHHHHhC
Q 010790 173 QEIAALLKVSAE----TGRVEKVYQYLQKLRST 201 (501)
Q Consensus 173 ~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~ 201 (501)
..+..|-..|.. .++.++|..+|++-.+.
T Consensus 184 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~ 216 (490)
T 2xm6_A 184 WSCNQLGYMYSRGLGVERNDAISAQWYRKSATS 216 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHC
Confidence 455555555554 45555555555554443
No 99
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.32 E-value=0.017 Score=57.08 Aligned_cols=166 Identities=12% Similarity=-0.004 Sum_probs=109.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhC----CCC--CC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQ----NLR--LS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~--p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~ 98 (501)
++.+-..+...|++++|...|++..+. +.. |. ...+..+-..+...| ++++|...+++.......
T Consensus 96 ~~~la~~~~~~G~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~~~~~~al~~~~~ 167 (373)
T 1hz4_A 96 LIQQSEILFAQGFLQTAWETQEKAFQLINEQHLEQLPMHEFLVRIRAQLLWAWA--------RLDEAEASARSGIEVLSS 167 (373)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCTTSTHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHhccccCcHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHhhc
Confidence 455666788889999999988886632 222 32 233444444666666 799999999887653221
Q ss_pred ----CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh-hhHH-----HHHHHHHHcCCHHHHHHHHHHHHHCCC
Q 010790 99 ----PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL-RTYD-----PALFCFCENLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 99 ----pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~-~ty~-----~lI~~~~~~g~~~~A~~lf~~M~~~gv 168 (501)
....++..+...+...|++++|...+++. ....-.++. ..+. ..+..+...|+.+.|..++++......
T Consensus 168 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a~~~~~ 246 (373)
T 1hz4_A 168 YQPQQQLQCLAMLIQCSLARGDLDNARSQLNRL-ENLLGNGKYHSDWISNANKVRVIYWQMTGDKAAAANWLRHTAKPEF 246 (373)
T ss_dssp SCGGGGHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHHTTSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHSCCCCC
T ss_pred cCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHHHhccCcchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhCCCCCC
Confidence 12456778888889999999999999887 432111111 1222 223347788999999999887754322
Q ss_pred CC---CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 169 SL---EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 169 ~p---d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
.+ ....+..+...+...|+.++|...+++...
T Consensus 247 ~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~ 281 (373)
T 1hz4_A 247 ANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNE 281 (373)
T ss_dssp TTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 11 133567777888889999999988887644
No 100
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=97.32 E-value=0.005 Score=61.39 Aligned_cols=165 Identities=9% Similarity=0.001 Sum_probs=116.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.++.+-..|...|++++|+..|.+..+. +-.+ ...+++.|-..+...+ ++++|.+.|++....
T Consensus 184 ~~~~lg~~y~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~lg~~y~~~~--------~~~~A~~~~~~al~~~~~~ 255 (378)
T 3q15_A 184 SLFVIAGNYDDFKHYDKALPHLEAALELAMDIQNDRFIAISLLNIANSYDRSG--------DDQMAVEHFQKAAKVSREK 255 (378)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHHHHHhh
Confidence 6788888999999999999999987642 2211 1234444444666666 899999999987761
Q ss_pred CCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCC--C-ChhhHHHHHHHHHHcCC---HHHHHHHHHHHHHCCCC
Q 010790 96 NVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV--P-RLRTYDPALFCFCENLE---AEKAYEVEEHMGLMGLS 169 (501)
Q Consensus 96 g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~--P-~~~ty~~lI~~~~~~g~---~~~A~~lf~~M~~~gv~ 169 (501)
+.+....++..+...|.+.|+.++|...+++......-. | -...++.+-..|...|+ +++|...++. .+..
T Consensus 256 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~l~~ly~~~~~~~~~~~al~~~~~---~~~~ 332 (378)
T 3q15_A 256 VPDLLPKVLFGLSWTLCKAGQTQKAFQFIEEGLDHITARSHKFYKELFLFLQAVYKETVDERKIHDLLSYFEK---KNLH 332 (378)
T ss_dssp CGGGHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCTTCCSCHHHHHHHHHHHHSSSCCHHHHHHHHHHHHH---TTCH
T ss_pred CChhHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHh---CCCh
Confidence 223337788999999999999999999999873222111 1 12345555556667788 7778777776 2322
Q ss_pred CC-HHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 170 LE-QQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 170 pd-~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
|+ ...+..|-..|.+.|+.++|...|++...
T Consensus 333 ~~~~~~~~~la~~y~~~g~~~~A~~~~~~al~ 364 (378)
T 3q15_A 333 AYIEACARSAAAVFESSCHFEQAAAFYRKVLK 364 (378)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 22 23566788889999999999999988643
No 101
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.30 E-value=0.006 Score=66.88 Aligned_cols=135 Identities=10% Similarity=0.084 Sum_probs=111.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-
Q 010790 58 LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR- 136 (501)
Q Consensus 58 ~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~- 136 (501)
...|+.|=..+...| ++++|++.|++..+... -+..+|+.+-.+|.+.|++++|...|++. .+. .|+
T Consensus 9 a~al~nLG~~~~~~G--------~~~eAi~~~~kAl~l~P-~~~~a~~nLg~~l~~~g~~~eA~~~~~~A-l~l--~P~~ 76 (723)
T 4gyw_A 9 ADSLNNLANIKREQG--------NIEEAVRLYRKALEVFP-EFAAAHSNLASVLQQQGKLQEALMHYKEA-IRI--SPTF 76 (723)
T ss_dssp HHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCS-CCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTC
T ss_pred HHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCC
Confidence 456777767888888 89999999999877422 25788999999999999999999999998 432 354
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~ 207 (501)
...|+.+=..|.+.|+.++|.+.|++..+..- -+...|+.|-..|.+.|+.++|++.|++..+. .|+.
T Consensus 77 ~~a~~nLg~~l~~~g~~~~A~~~~~kAl~l~P-~~~~a~~~Lg~~~~~~g~~~eAi~~~~~Al~l--~P~~ 144 (723)
T 4gyw_A 77 ADAYSNMGNTLKEMQDVQGALQCYTRAIQINP-AFADAHSNLASIHKDSGNIPEAIASYRTALKL--KPDF 144 (723)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSCC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCC
Confidence 57889999999999999999999999876531 25678999999999999999999999987664 4543
No 102
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=97.29 E-value=0.0023 Score=63.52 Aligned_cols=167 Identities=11% Similarity=-0.011 Sum_probs=122.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----C
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN----N 96 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~----g 96 (501)
.+..+-..+.+.|++++|+..|+++.+..- .+ ...|..+-..+...+ ++++|...|++.... +
T Consensus 11 ~l~~~g~~~~~~g~~~~A~~~~~~al~~~~-~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~~~~~ 81 (406)
T 3sf4_A 11 ELALEGERLCKSGDCRAGVSFFEAAVQVGT-EDLKTLSAIYSQLGNAYFYLH--------DYAKALEYHHHDLTLARTIG 81 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCC-SCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhcCc-ccHHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHHhcc
Confidence 556667788999999999999999887632 23 234555555677777 899999999886542 2
Q ss_pred CCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHcCC-------------------
Q 010790 97 VIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCENLE------------------- 152 (501)
Q Consensus 97 ~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~g~------------------- 152 (501)
..| ...++..+...|...|++++|...+++......-.++ ..++..+-..|...|+
T Consensus 82 ~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~a~~ 161 (406)
T 3sf4_A 82 DQLGEAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVYHAKGKSFGCPGPQDVGEFPEEVRD 161 (406)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTCC-------CCCCHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCcccccccchhhhhhhhHHH
Confidence 222 2557888889999999999999999877221111122 3578888888999999
Q ss_pred -HHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 153 -AEKAYEVEEHMGLM----GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 153 -~~~A~~lf~~M~~~----gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
+++|...+++.... +-.| ...+|..+...|...|+.++|...+.+...
T Consensus 162 ~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al~ 215 (406)
T 3sf4_A 162 ALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLL 215 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 99999998876432 2111 234788888899999999999999988754
No 103
>2xm6_A Protein corresponding to locus C5321 from CFT073 strain; unknown function, SEL1-like repeats; 1.68A {Escherichia coli}
Probab=97.28 E-value=0.067 Score=55.21 Aligned_cols=162 Identities=8% Similarity=0.005 Sum_probs=129.0
Q ss_pred hHHHHHHHHHHh----cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCC
Q 010790 24 TNFLINLQSCTK----SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99 (501)
Q Consensus 24 ~~~n~lI~~~~k----~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p 99 (501)
..+..|=..|.. .++.++|+..|.+..+.| +...+..|=..+..+. ...++.++|+..|+...+.|
T Consensus 76 ~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~~~a~~~Lg~~y~~g~----g~~~~~~~A~~~~~~a~~~~--- 145 (490)
T 2xm6_A 76 PAEYVLGLRYMNGEGVPQDYAQAVIWYKKAALKG---LPQAQQNLGVMYHEGN----GVKVDKAESVKWFRLAAEQG--- 145 (490)
T ss_dssp HHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHTS----SSCCCHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC---CHHHHHHHHHHHHcCC----CCCCCHHHHHHHHHHHHHCC---
Confidence 455556667777 899999999999998876 3455555555666521 01127999999999988876
Q ss_pred CHHHHHHHHHHHHh----CCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCCC
Q 010790 100 NEASVTSVARLAAS----KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLSLE 171 (501)
Q Consensus 100 d~~t~~~li~~~~~----~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~pd 171 (501)
+...+..|-..|.. .++.++|.+.|++. .+.+ +...+..|-..|.. .++.++|.+.|+.....| +
T Consensus 146 ~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~a-~~~~---~~~a~~~Lg~~y~~g~g~~~~~~~A~~~~~~a~~~~---~ 218 (490)
T 2xm6_A 146 RDSGQQSMGDAYFEGDGVTRDYVMAREWYSKA-AEQG---NVWSCNQLGYMYSRGLGVERNDAISAQWYRKSATSG---D 218 (490)
T ss_dssp CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTT---C
T ss_pred CHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHH-HHCC---CHHHHHHHHHHHhcCCCCCcCHHHHHHHHHHHHHCC---C
Confidence 56778888888887 88999999999998 6653 67788888888887 899999999999988865 5
Q ss_pred HHHHHHHHHHHHh----cCChHHHHHHHHHHHhCC
Q 010790 172 QQEIAALLKVSAE----TGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 172 ~~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~~ 202 (501)
...+..|-..|.. .++.++|..+|++..+.+
T Consensus 219 ~~a~~~lg~~y~~g~g~~~~~~~A~~~~~~a~~~~ 253 (490)
T 2xm6_A 219 ELGQLHLADMYYFGIGVTQDYTQSRVLFSQSAEQG 253 (490)
T ss_dssp HHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHCC
Confidence 6788888888887 889999999999988764
No 104
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.26 E-value=0.0098 Score=48.08 Aligned_cols=103 Identities=8% Similarity=-0.049 Sum_probs=56.6
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
++++|...|++..... +.+...+..+...+...|++++|...+++. .... +.+...+..+-..|.+.|+.++|...|
T Consensus 27 ~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~A~~~~ 103 (131)
T 2vyi_A 27 NFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLGNYAGAVQDCERA-ICID-PAYSKAYGRMGLALSSLNKHVEAVAYY 103 (131)
T ss_dssp CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhhchHHHHHHHHHH-HhcC-ccCHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 5666666666655432 224555666666666666666666666665 3221 123455555556666666666666666
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHhcCC
Q 010790 161 EHMGLMGLSLEQQEIAALLKVSAETGR 187 (501)
Q Consensus 161 ~~M~~~gv~pd~~t~~~Li~~~~~~g~ 187 (501)
++.....- .+...+..+...+.+.|+
T Consensus 104 ~~~~~~~p-~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 104 KKALELDP-DNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHST-TCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcCc-cchHHHHHHHHHHHHHhc
Confidence 66554321 134455555555544443
No 105
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=97.20 E-value=0.0041 Score=54.44 Aligned_cols=122 Identities=7% Similarity=0.046 Sum_probs=93.9
Q ss_pred CCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHH-HHHcCCH-
Q 010790 76 SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFC-FCENLEA- 153 (501)
Q Consensus 76 ~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~-~~~~g~~- 153 (501)
+...+.+++|...|+...... +.+...|..+...|...|++++|...|++. .... +.+...+..+-.. |...|+.
T Consensus 20 ~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a-l~~~-p~~~~~~~~la~~l~~~~~~~~ 96 (177)
T 2e2e_A 20 FASQQNPEAQLQALQDKIRAN-PQNSEQWALLGEYYLWQNDYSNSLLAYRQA-LQLR-GENAELYAALATVLYYQASQHM 96 (177)
T ss_dssp CC-----CCCCHHHHHHHHHC-CSCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHH-CSCHHHHHHHHHHHHHHTTTCC
T ss_pred hhhccCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHcC-CCCHHHHHHHHHHHHHhcCCcc
Confidence 345567888888888876643 346788999999999999999999999998 4321 1255666777777 7789998
Q ss_pred -HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 154 -EKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 154 -~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
++|...|+......- -+...|..+...|...|+.++|...|.+....
T Consensus 97 ~~~A~~~~~~al~~~p-~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 97 TAQTRAMIDKALALDS-NEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp CHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHhCC-CcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 999999999887632 25678888999999999999999999998765
No 106
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=97.19 E-value=0.0037 Score=68.15 Aligned_cols=159 Identities=11% Similarity=-0.098 Sum_probs=124.0
Q ss_pred HhcCCHHHHHHHHHHHHh------CCCCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHH
Q 010790 34 TKSKDLTTAISLYESAHS------QNLRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTS 106 (501)
Q Consensus 34 ~k~g~~~~A~~lf~~m~~------~gv~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~ 106 (501)
...|++++|++.|++..+ ....| +...+..+-..+...+ ++++|.+.|++..+.. +-+...|..
T Consensus 402 ~~~~~~~~A~~~~~~al~~~~~~~~~~~p~~~~~~~~~a~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~a~~~ 472 (681)
T 2pzi_A 402 TVLSQPVQTLDSLRAARHGALDADGVDFSESVELPLMEVRALLDLG--------DVAKATRKLDDLAERV-GWRWRLVWY 472 (681)
T ss_dssp TTTCCHHHHHHHHHHHHTC-------CCTTCSHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHH-CCCHHHHHH
T ss_pred ccccCHHHHHHHHHHhhhhcccccccccccchhHHHHHHHHHHhcC--------CHHHHHHHHHHHhccC-cchHHHHHH
Confidence 788999999999999872 11223 3455655555666666 8999999999988742 236778899
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc
Q 010790 107 VARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET 185 (501)
Q Consensus 107 li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~ 185 (501)
+-.+|...|++++|...|++. .+. .| +...|..+-..|.+.|+.++ .+.|++..+.+- -+...|..+-.+|.+.
T Consensus 473 lg~~~~~~g~~~~A~~~~~~a-l~l--~P~~~~~~~~lg~~~~~~g~~~~-~~~~~~al~~~P-~~~~a~~~lg~~~~~~ 547 (681)
T 2pzi_A 473 RAVAELLTGDYDSATKHFTEV-LDT--FPGELAPKLALAATAELAGNTDE-HKFYQTVWSTND-GVISAAFGLARARSAE 547 (681)
T ss_dssp HHHHHHHHTCHHHHHHHHHHH-HHH--STTCSHHHHHHHHHHHHHTCCCT-TCHHHHHHHHCT-TCHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCHHHHHHHHHHH-HHh--CCCChHHHHHHHHHHHHcCChHH-HHHHHHHHHhCC-chHHHHHHHHHHHHHc
Confidence 999999999999999999998 432 24 45778888889999999999 999999876532 2667899999999999
Q ss_pred CChHHHHHHHHHHHhCCCCCCHH
Q 010790 186 GRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 186 g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
|+.++|+..|++..+. .|+..
T Consensus 548 g~~~~A~~~~~~al~l--~P~~~ 568 (681)
T 2pzi_A 548 GDRVGAVRTLDEVPPT--SRHFT 568 (681)
T ss_dssp TCHHHHHHHHHTSCTT--STTHH
T ss_pred CCHHHHHHHHHhhccc--CcccH
Confidence 9999999999876433 45543
No 107
>1hz4_A MALT regulatory protein; two-helix bundles, helix repeats, protein superhelix, transc activator; 1.45A {Escherichia coli} SCOP: a.118.8.2
Probab=97.17 E-value=0.02 Score=56.45 Aligned_cols=167 Identities=12% Similarity=-0.051 Sum_probs=114.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC--C--CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLR--L--SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~--p--~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
.+..+-..|...|++++|...+++..+..-. + ...+|..+-..+...| ++++|...+++.....-.++
T Consensus 137 ~~~~la~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~la~~~~~~g--------~~~~A~~~l~~a~~~~~~~~ 208 (373)
T 1hz4_A 137 LVRIRAQLLWAWARLDEAEASARSGIEVLSSYQPQQQLQCLAMLIQCSLARG--------DLDNARSQLNRLENLLGNGK 208 (373)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHTTTSCGGGGHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHhhccCcHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHhccC
Confidence 5566777889999999999999997643221 1 2345555555666666 89999999998765321111
Q ss_pred --HHHHH----HHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC----C
Q 010790 101 --EASVT----SVARLAASKNDGDYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCENLEAEKAYEVEEHMGLM----G 167 (501)
Q Consensus 101 --~~t~~----~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~----g 167 (501)
..... ..+..+...|+.++|...+.+. ......+. ...+..+...+...|+.++|..+++..... |
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~g~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~a~~~~~~~~ 287 (373)
T 1hz4_A 209 YHSDWISNANKVRVIYWQMTGDKAAAANWLRHT-AKPEFANNHFLQGQWRNIARAQILLGEFEPAEIVLEELNENARSLR 287 (373)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHS-CCCCCTTCGGGHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTT
T ss_pred cchhHHHHHHHHHHHHHHHCCCHHHHHHHHHhC-CCCCCCcchhhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCc
Confidence 11111 2334577999999999999998 44322111 224567778899999999999999887542 3
Q ss_pred CCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 168 LSLEQQ-EIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 168 v~pd~~-t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
..++.. .+..+-..+...|+.++|...|.+...
T Consensus 288 ~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~al~ 321 (373)
T 1hz4_A 288 LMSDLNRNLLLLNQLYWQAGRKSDAQRVLLDALK 321 (373)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 222332 566667778889999999999887643
No 108
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=97.15 E-value=0.012 Score=47.43 Aligned_cols=116 Identities=12% Similarity=0.013 Sum_probs=91.0
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..+..+...+...|++++|+..|++..... +.+...+..+-..+...+ ++++|.+.++...... +.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~ 82 (131)
T 2vyi_A 13 ERLKTEGNEQMKVENFEAAVHFYGKAIELN-PANAVYFCNRAAAYSKLG--------NYAGAVQDCERAICID-PAYSKA 82 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHccCHHHHHHHHHHHHHcC-CCCHHHHHHHHHHHHHhh--------chHHHHHHHHHHHhcC-ccCHHH
Confidence 377888889999999999999999987653 235667777767777777 8999999999987753 335778
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCC
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLE 152 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~ 152 (501)
+..+...|...|++++|...|++. ... .| +...+..+...+.+.|+
T Consensus 83 ~~~~~~~~~~~~~~~~A~~~~~~~-~~~--~p~~~~~~~~l~~~~~~~~~ 129 (131)
T 2vyi_A 83 YGRMGLALSSLNKHVEAVAYYKKA-LEL--DPDNETYKSNLKIAELKLRE 129 (131)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHH--STTCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHH-Hhc--CccchHHHHHHHHHHHHHhc
Confidence 899999999999999999999998 443 24 55666666677766665
No 109
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.15 E-value=0.014 Score=61.74 Aligned_cols=133 Identities=7% Similarity=-0.117 Sum_probs=109.2
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...|..+-..|.+.|++++|+..|++..+.. +-+...|..+-..+...+ ++++|.+.|++..+.. +-+..
T Consensus 23 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~ 92 (568)
T 2vsy_A 23 FVAWLMLADAELGMGDTTAGEMAVQRGLALH-PGHPEAVARLGRVRWTQQ--------RHAEAAVLLQQASDAA-PEHPG 92 (568)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHTTS-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHhcC-CCCHH
Confidence 3578888889999999999999999988753 234667777767777777 8999999999987753 23578
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHc---CCHHHHHHHHHHHHHCC
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCEN---LEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~---g~~~~A~~lf~~M~~~g 167 (501)
.+..+...|...|+.++|.+.|++. .+.. +-+...+..+...|... |+.++|.+.+++....+
T Consensus 93 ~~~~la~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~l~~~~~~~~~~g~~~~A~~~~~~al~~~ 158 (568)
T 2vsy_A 93 IALWLGHALEDAGQAEAAAAAYTRA-HQLL-PEEPYITAQLLNWRRRLCDWRALDVLSAQVRAAVAQG 158 (568)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCCTTHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHhhccccHHHHHHHHHHHHhcC
Confidence 8999999999999999999999998 4432 13567888889999999 99999999999987654
No 110
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.13 E-value=0.0085 Score=48.88 Aligned_cols=101 Identities=13% Similarity=-0.029 Sum_probs=83.7
Q ss_pred CCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q 010790 98 IPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAA 177 (501)
Q Consensus 98 ~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~ 177 (501)
..+...+..+...+...|++++|...|++. ... -+.+...+..+-..|...|+.++|...|++..... ..+...|..
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-l~~-~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~ 89 (133)
T 2lni_A 13 PDLALMVKNKGNECFQKGDYPQAMKHYTEA-IKR-NPKDAKLYSNRAACYTKLLEFQLALKDCEECIQLE-PTFIKGYTR 89 (133)
T ss_dssp SCHHHHHHHHHHHHHHTTCSHHHHHHHHHH-HTT-CTTCHHHHHHHHHHHTTTTCHHHHHHHHHHHHHHC-TTCHHHHHH
T ss_pred cccHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHc-CCCcHHHHHHHHHHHHHhccHHHHHHHHHHHHHhC-CCchHHHHH
Confidence 346778888999999999999999999998 433 12366788888888999999999999999987753 236778899
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhC
Q 010790 178 LLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 178 Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+...|.+.|+.++|...|++....
T Consensus 90 la~~~~~~~~~~~A~~~~~~~~~~ 113 (133)
T 2lni_A 90 KAAALEAMKDYTKAMDVYQKALDL 113 (133)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHh
Confidence 999999999999999999987654
No 111
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=97.09 E-value=0.011 Score=48.16 Aligned_cols=118 Identities=7% Similarity=-0.023 Sum_probs=88.6
Q ss_pred CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC
Q 010790 57 SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136 (501)
Q Consensus 57 ~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~ 136 (501)
+...|..+-..+...+ ++++|...|++..... +.+..++..+...|...|++++|...+++. .... +.+
T Consensus 15 ~~~~~~~~~~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~a-~~~~-~~~ 83 (133)
T 2lni_A 15 LALMVKNKGNECFQKG--------DYPQAMKHYTEAIKRN-PKDAKLYSNRAACYTKLLEFQLALKDCEEC-IQLE-PTF 83 (133)
T ss_dssp HHHHHHHHHHHHHHTT--------CSHHHHHHHHHHHTTC-TTCHHHHHHHHHHHTTTTCHHHHHHHHHHH-HHHC-TTC
T ss_pred cHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHcC-CCcHHHHHHHHHHHHHhccHHHHHHHHHHH-HHhC-CCc
Confidence 3455666666777777 8999999999987753 236788999999999999999999999998 4432 235
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG 186 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g 186 (501)
...+..+-..|.+.|+.++|...|++.....- -+...+..+...+.+.|
T Consensus 84 ~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~p-~~~~~~~~l~~~~~~~~ 132 (133)
T 2lni_A 84 IKGYTRKAAALEAMKDYTKAMDVYQKALDLDS-SCKEAADGYQRCMMAQY 132 (133)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCG-GGTHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHHHhhHHHHHHHHHHHHHhCC-CchHHHHHHHHHHHHhc
Confidence 67888888899999999999999998876421 13345555555554433
No 112
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=97.04 E-value=0.019 Score=46.37 Aligned_cols=108 Identities=13% Similarity=0.067 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCC--CCC----HHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGL--SLE----QQEI 175 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv--~pd----~~t~ 175 (501)
..+..+...+...|++++|...|++. .... +.+...+..+-..|...|+.++|...|+......- .++ ...|
T Consensus 5 ~~~~~l~~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (131)
T 1elr_A 5 LKEKELGNDAYKKKDFDTALKHYDKA-KELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENREDYRQIAKAY 82 (131)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH-HhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHHHhhccccchhHHHHHHHH
Confidence 45777888899999999999999988 4432 23667888888899999999999999998866421 222 6788
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHH
Q 010790 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213 (501)
Q Consensus 176 ~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i 213 (501)
..+...|.+.|+.++|...|.+.... .|+......+
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l 118 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKC 118 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHH
Confidence 88889999999999999999998775 3555544433
No 113
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.03 E-value=0.015 Score=48.39 Aligned_cols=99 Identities=10% Similarity=-0.036 Sum_probs=84.0
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH
Q 010790 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR----LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t 174 (501)
.+...+..+...+...|++++|...|++. .. ..|+ ...|..+-..|...|++++|...|+...... ..+...
T Consensus 26 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a-~~--~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~ 101 (148)
T 2dba_A 26 SSVEQLRKEGNELFKCGDYGGALAAYTQA-LG--LDATPQDQAVLHRNRAACHLKLEDYDKAETEASKAIEKD-GGDVKA 101 (148)
T ss_dssp CCHHHHHHHHHHHHTTTCHHHHHHHHHHH-HT--SCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHT-SCCHHH
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HH--HcccchHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhC-ccCHHH
Confidence 46778888999999999999999999998 43 3476 6788888889999999999999999887653 225778
Q ss_pred HHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 175 IAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 175 ~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
|..+...|...|+.++|...|.+....
T Consensus 102 ~~~~a~~~~~~~~~~~A~~~~~~al~~ 128 (148)
T 2dba_A 102 LYRRSQALEKLGRLDQAVLDLQRCVSL 128 (148)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 888999999999999999999988764
No 114
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=97.03 E-value=0.0054 Score=66.70 Aligned_cols=166 Identities=8% Similarity=-0.056 Sum_probs=119.0
Q ss_pred HHHHHHHHHHhcCCHHHHH-HHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCC------
Q 010790 25 NFLINLQSCTKSKDLTTAI-SLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNV------ 97 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~-~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~------ 97 (501)
.|-.....+-+.|+.++|. .+|++... .++.+...|-..+......+ .+++|.++|+.+.....
T Consensus 345 lW~~ya~~~~~~~~~~~a~r~il~rAi~-~~P~s~~Lwl~~a~~ee~~~--------~~e~aR~iyek~l~~l~~~~~~~ 415 (679)
T 4e6h_A 345 IWFNMANYQGEKNTDSTVITKYLKLGQQ-CIPNSAVLAFSLSEQYELNT--------KIPEIETTILSCIDRIHLDLAAL 415 (679)
T ss_dssp HHHHHHHHHHHHSCCTTHHHHHHHHHHH-HCTTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHH-hCCCCHHHHHHHHHHHHHhC--------CHHHHHHHHHHHHHHHHHHhhhh
Confidence 3444445556778888997 99999875 34445555656666666777 89999999999876320
Q ss_pred ---CCC------------HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc--CCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 98 ---IPN------------EASVTSVARLAASKNDGDYAFVLIKRMNNEF--NVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 98 ---~pd------------~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~--gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
.|+ ..+|...++..-+.|..+.|..+|... .+. ...+.+....+.|.-. ..++.+.|..+|
T Consensus 416 ~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~~l~~AR~vf~~A-~~~~~~~~~~lyi~~A~lE~~-~~~d~e~Ar~if 493 (679)
T 4e6h_A 416 MEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQGLAASRKIFGKC-RRLKKLVTPDIYLENAYIEYH-ISKDTKTACKVL 493 (679)
T ss_dssp HHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-HHTGGGSCTHHHHHHHHHHHT-TTSCCHHHHHHH
T ss_pred hhccCcchhhhhhhccchHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhcCCCChHHHHHHHHHHHH-hCCCHHHHHHHH
Confidence 142 346888899988999999999999998 543 2223334434444422 235699999999
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 010790 161 EHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 161 ~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~ 202 (501)
+..... ..-+...|...++.....|+.+.|..+|++.....
T Consensus 494 e~~Lk~-~p~~~~~w~~y~~fe~~~~~~~~AR~lferal~~~ 534 (679)
T 4e6h_A 494 ELGLKY-FATDGEYINKYLDFLIYVNEESQVKSLFESSIDKI 534 (679)
T ss_dssp HHHHHH-HTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHTTTS
T ss_pred HHHHHH-CCCchHHHHHHHHHHHhCCCHHHHHHHHHHHHHhc
Confidence 988776 33366678888888888999999999999877653
No 115
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=97.01 E-value=0.019 Score=47.36 Aligned_cols=99 Identities=13% Similarity=0.021 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q 010790 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAAL 178 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~L 178 (501)
.+...+..+...+...|++++|...|.+. .... +.+...|..+-..|...|+.++|...|+...... ..+...|..+
T Consensus 7 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a-l~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l 83 (137)
T 3q49_B 7 PSAQELKEQGNRLFVGRKYPEAAACYGRA-ITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFL 83 (137)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhCcHHHHHHHHHHH-HhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-chhHHHHHHH
Confidence 46778889999999999999999999988 4432 2356788888889999999999999999988754 2267789999
Q ss_pred HHHHHhcCChHHHHHHHHHHHh
Q 010790 179 LKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 179 i~~~~~~g~~~~a~~ll~~M~~ 200 (501)
-..|...|+.++|...|.+...
T Consensus 84 ~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 84 GQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999998765
No 116
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=97.00 E-value=0.016 Score=45.91 Aligned_cols=99 Identities=11% Similarity=-0.024 Sum_probs=81.0
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
+...+..+...+...|++++|...|++. .... +.+...+..+-..|...|+.++|...+++..... ..+...|..+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~~~-~~~~~~~~~~a 79 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEA-IKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLK-PDWGKGYSRKA 79 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHH-HHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHHHHhC-cccHHHHHHHH
Confidence 3456778888899999999999999998 4432 2366778888888999999999999999887653 22577888999
Q ss_pred HHHHhcCChHHHHHHHHHHHhC
Q 010790 180 KVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..+...|+.++|...+.+....
T Consensus 80 ~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 80 AALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHhhHHHHHHHHHHHHHc
Confidence 9999999999999999988754
No 117
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.96 E-value=0.0084 Score=47.16 Aligned_cols=99 Identities=7% Similarity=-0.100 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-CCHHHHHHHH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS-LEQQEIAALL 179 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~-pd~~t~~~Li 179 (501)
...+..+...+...|++++|...|++. .... +.+...|..+-..|...|+.++|...|+......-. .+...|..+.
T Consensus 6 ~~~~~~~~~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~l~ 83 (112)
T 2kck_A 6 PEEYYLEGVLQYDAGNYTESIDLFEKA-IQLD-PEESKYWLMKGKALYNLERYEEAVDCYNYVINVIEDEYNKDVWAAKA 83 (112)
T ss_dssp TTGGGGHHHHHHSSCCHHHHHHHHHHH-HHHC-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTSCCTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHH-HHhC-cCCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCcccchHHHHHHHH
Confidence 345667788889999999999999988 4432 235677888888999999999999999998875311 1478899999
Q ss_pred HHHHhc-CChHHHHHHHHHHHhC
Q 010790 180 KVSAET-GRVEKVYQYLQKLRST 201 (501)
Q Consensus 180 ~~~~~~-g~~~~a~~ll~~M~~~ 201 (501)
..+.+. |+.++|.+.|.+....
T Consensus 84 ~~~~~~~~~~~~A~~~~~~~~~~ 106 (112)
T 2kck_A 84 DALRYIEGKEVEAEIAEARAKLE 106 (112)
T ss_dssp HHHTTCSSCSHHHHHHHHHHGGG
T ss_pred HHHHHHhCCHHHHHHHHHHHhhc
Confidence 999999 9999999999988665
No 118
>4e6h_A MRNA 3'-END-processing protein RNA14; HAT domain, heat repeat, CLP1, PCF11, structural protein; 2.30A {Kluyveromyces lactis} PDB: 4e85_A 4eba_A
Probab=96.94 E-value=0.02 Score=62.19 Aligned_cols=181 Identities=7% Similarity=-0.075 Sum_probs=130.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCC---------CCC------------HHHHHHHHHHHHhCCCCCCCChhhHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNL---------RLS------------LHHFNALLYLCSDSATDPSSKDSALR 83 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv---------~p~------------~~ty~~LL~~c~~~~~~~~~k~~~~~ 83 (501)
.|-..+...-+.|+++.|.++|+.+..... .|+ ...|-..+....+.+ .++
T Consensus 380 Lwl~~a~~ee~~~~~e~aR~iyek~l~~l~~~~~~~~~~~p~~~~~~~~~~~~~~~vWi~y~~~erR~~--------~l~ 451 (679)
T 4e6h_A 380 LAFSLSEQYELNTKIPEIETTILSCIDRIHLDLAALMEDDPTNESAINQLKSKLTYVYCVYMNTMKRIQ--------GLA 451 (679)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHSTTCHHHHHHHHHHHHHHHHHHHHHHHHHH--------CHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhhhhhccCcchhhhhhhccchHHHHHHHHHHHHHcC--------CHH
Confidence 456778888899999999999999886410 132 234666666655555 689
Q ss_pred HHHHHHHHHHhC-C-CCCCHHHHHHHHHHHHhC-CCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 84 HGFRVFDQMLSN-N-VIPNEASVTSVARLAASK-NDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 84 ~a~~lf~~M~~~-g-~~pd~~t~~~li~~~~~~-g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
.|+.+|+..... + ..+......+.| --+. ++.+.|..+|+...+. ++-+..-|...+......|+.+.|+.+|
T Consensus 452 ~AR~vf~~A~~~~~~~~~~lyi~~A~l--E~~~~~d~e~Ar~ife~~Lk~--~p~~~~~w~~y~~fe~~~~~~~~AR~lf 527 (679)
T 4e6h_A 452 ASRKIFGKCRRLKKLVTPDIYLENAYI--EYHISKDTKTACKVLELGLKY--FATDGEYINKYLDFLIYVNEESQVKSLF 527 (679)
T ss_dssp HHHHHHHHHHHTGGGSCTHHHHHHHHH--HHTTTSCCHHHHHHHHHHHHH--HTTCHHHHHHHHHHHHHHTCHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCChHHHHHHHHH--HHHhCCCHHHHHHHHHHHHHH--CCCchHHHHHHHHHHHhCCCHHHHHHHH
Confidence 999999998875 2 223333333333 3344 4599999999988444 3224455677788778899999999999
Q ss_pred HHHHHCCCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhcc
Q 010790 161 EHMGLMGLSL--EQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSG 219 (501)
Q Consensus 161 ~~M~~~gv~p--d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~ 219 (501)
+........+ ....|..+++.=.+.|+.+.+..+..+|.+. .|+......+..-|.-
T Consensus 528 eral~~~~~~~~~~~lw~~~~~fE~~~G~~~~~~~v~~R~~~~--~P~~~~~~~f~~ry~~ 586 (679)
T 4e6h_A 528 ESSIDKISDSHLLKMIFQKVIFFESKVGSLNSVRTLEKRFFEK--FPEVNKLEEFTNKYKV 586 (679)
T ss_dssp HHHTTTSSSTTHHHHHHHHHHHHHHHTCCSHHHHHHHHHHHHH--STTCCHHHHHHHHTCB
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh--CCCCcHHHHHHHHhcC
Confidence 9987664322 3468999999888999999999999999887 5666666666666643
No 119
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=96.93 E-value=0.0066 Score=58.84 Aligned_cols=157 Identities=10% Similarity=0.055 Sum_probs=107.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhC----CCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQ----NLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~----gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.|+.+-..|.+.|++++|+..|++..+. |-... ..+++.+-..+.. + ++++|++.|++....
T Consensus 78 ~~~~lg~~~~~~g~~~~A~~~~~~Al~l~~~~g~~~~~a~~~~~lg~~~~~-g--------~~~~A~~~~~~Al~~~~~~ 148 (307)
T 2ifu_A 78 AFEQAGMMLKDLQRMPEAVQYIEKASVMYVENGTPDTAAMALDRAGKLMEP-L--------DLSKAVHLYQQAAAVFENE 148 (307)
T ss_dssp HHHHHHHHHHHTTCGGGGHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTT-T--------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHc-C--------CHHHHHHHHHHHHHHHHhC
Confidence 7788888899999999999999986532 21111 2345555456655 6 899999999886542
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhh---cCCCCC-hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 010790 96 NVIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNE---FNVVPR-LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170 (501)
Q Consensus 96 g~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~---~gi~P~-~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p 170 (501)
|..+ -..+++.+...|.+.|++++|...|++.... .+..+. ..++..+...+...|+.+.|...|++.. . .|
T Consensus 149 ~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~A~~~~~~al-~--~p 225 (307)
T 2ifu_A 149 ERLRQAAELIGKASRLLVRQQKFDEAAASLQKEKSMYKEMENYPTCYKKCIAQVLVQLHRADYVAAQKCVRESY-S--IP 225 (307)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHT-T--ST
T ss_pred CChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHcCCHHHHHHHHHHHh-C--CC
Confidence 1111 1467888999999999999999999987321 111111 2366667777888899999999999987 3 33
Q ss_pred C------HHHHHHHHHHHHhcCChHHHHHH
Q 010790 171 E------QQEIAALLKVSAETGRVEKVYQY 194 (501)
Q Consensus 171 d------~~t~~~Li~~~~~~g~~~~a~~l 194 (501)
+ ......++.++ ..|+.+.+.++
T Consensus 226 ~~~~~~e~~~l~~l~~~~-~~~d~~~~~~~ 254 (307)
T 2ifu_A 226 GFSGSEDCAALEDLLQAY-DEQDEEQLLRV 254 (307)
T ss_dssp TSTTSHHHHHHHHHHHHH-HTTCHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH-HhcCHHHHHHH
Confidence 2 12455566655 56777666653
No 120
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.93 E-value=0.0099 Score=51.00 Aligned_cols=124 Identities=7% Similarity=-0.012 Sum_probs=94.5
Q ss_pred CCChhhHHHHHHHHHHHHhCCCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCH
Q 010790 76 SSKDSALRHGFRVFDQMLSNNVIP-NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEA 153 (501)
Q Consensus 76 ~~k~~~~~~a~~lf~~M~~~g~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~ 153 (501)
+...|++++|++.+...... .| +...+-.+-..|.+.|++++|.+.|++. .+. .| +..+|..+-..|.+.|+.
T Consensus 7 ~~~~~~~e~ai~~~~~a~~~--~p~~~~~~~~la~~y~~~~~~~~A~~~~~~a-l~~--~p~~~~a~~~lg~~~~~~~~~ 81 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTPS--PRQKSIKGFYFAKLYYEAKEYDLAKKYICTY-INV--QERDPKAHRFLGLLYELEENT 81 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSCS--HHHHHTTHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCH
T ss_pred HHHcChHHHHHHHHHHhccc--CcccHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCCHHHHHHHHHHHHHcCch
Confidence 44567899999998876432 22 2344567888999999999999999998 432 24 567888888999999999
Q ss_pred HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCChHHHHHH-HHHHHhCCCCCCHH
Q 010790 154 EKAYEVEEHMGLMGLSL-EQQEIAALLKVSAETGRVEKVYQY-LQKLRSTVRCVNEE 208 (501)
Q Consensus 154 ~~A~~lf~~M~~~gv~p-d~~t~~~Li~~~~~~g~~~~a~~l-l~~M~~~~~~p~~~ 208 (501)
++|...|+...+. .| +...|..|-..|.+.|+.++|.+. +++..+. .|+..
T Consensus 82 ~~A~~~~~~al~~--~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l--~P~~~ 134 (150)
T 4ga2_A 82 DKAVECYRRSVEL--NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL--FPGSP 134 (150)
T ss_dssp HHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH--STTCH
T ss_pred HHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh--CcCCH
Confidence 9999999998875 34 567899999999999998776655 4655442 45443
No 121
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=96.93 E-value=0.0076 Score=52.72 Aligned_cols=121 Identities=7% Similarity=-0.007 Sum_probs=90.6
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-HH
Q 010790 34 TKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARL-AA 112 (501)
Q Consensus 34 ~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~-~~ 112 (501)
...|++++|+..|++..+.. +.+...|..+-..+...+ ++++|...|+....... .+...+..+... |.
T Consensus 21 ~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~~--------~~~~A~~~~~~al~~~p-~~~~~~~~la~~l~~ 90 (177)
T 2e2e_A 21 ASQQNPEAQLQALQDKIRAN-PQNSEQWALLGEYYLWQN--------DYSNSLLAYRQALQLRG-ENAELYAALATVLYY 90 (177)
T ss_dssp C-----CCCCHHHHHHHHHC-CSCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHC-SCHHHHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHcCC-CCHHHHHHHHHHHHH
Confidence 45688999999998877643 235567777767777777 89999999999876432 356777788888 77
Q ss_pred hCCCH--HHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 113 SKNDG--DYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 113 ~~g~~--~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
..|+. ++|...|++. .... +-+...+..+-..|...|+.++|...|+.....
T Consensus 91 ~~~~~~~~~A~~~~~~a-l~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 144 (177)
T 2e2e_A 91 QASQHMTAQTRAMIDKA-LALD-SNEITALMLLASDAFMQANYAQAIELWQKVMDL 144 (177)
T ss_dssp HTTTCCCHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred hcCCcchHHHHHHHHHH-HHhC-CCcHHHHHHHHHHHHHcccHHHHHHHHHHHHhh
Confidence 89998 9999999998 4432 124577788888899999999999999998775
No 122
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.92 E-value=0.021 Score=56.20 Aligned_cols=142 Identities=10% Similarity=-0.121 Sum_probs=79.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..|.+.|++++|+..|++..+..-.... .. .+.+.++- .+ ...+|
T Consensus 149 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~p~~~~------------~~---------~~~~~~~~-~~-------~~~~~ 199 (336)
T 1p5q_A 149 IVKERGTVYFKEGKYKQALLQYKKIVSWLEYESS------------FS---------NEEAQKAQ-AL-------RLASH 199 (336)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCC------------CC---------SHHHHHHH-HH-------HHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHhhcccc------------CC---------hHHHHHHH-HH-------HHHHH
Confidence 6777888899999999999999998754321110 00 01111111 11 12345
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAE 184 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~ 184 (501)
..+..+|.+.|++++|...|++. .... +.+...|..+-.+|...|+.++|...|+......- -+...+..|...+.+
T Consensus 200 ~nla~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-~~~~a~~~l~~~~~~ 276 (336)
T 1p5q_A 200 LNLAMCHLKLQAFSAAIESCNKA-LELD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP-NNKAAKTQLAVCQQR 276 (336)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS-SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHH
Confidence 55666666666666666666665 3221 12445555566666666666666666666554321 134556666666666
Q ss_pred cCChHHH-HHHHHHH
Q 010790 185 TGRVEKV-YQYLQKL 198 (501)
Q Consensus 185 ~g~~~~a-~~ll~~M 198 (501)
.|+.++| ..++..|
T Consensus 277 ~~~~~~a~~~~~~~~ 291 (336)
T 1p5q_A 277 IRRQLAREKKLYANM 291 (336)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 6666555 3344444
No 123
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=96.88 E-value=0.025 Score=55.74 Aligned_cols=111 Identities=10% Similarity=0.008 Sum_probs=78.1
Q ss_pred HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh
Q 010790 60 HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139 (501)
Q Consensus 60 ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t 139 (501)
.|..+-..+...+ ++++|...|++.......... . ..+.+.+ ...+ ....
T Consensus 149 ~~~~~g~~~~~~g--------~~~~A~~~y~~Al~~~p~~~~------------~-~~~~~~~-~~~~--------~~~~ 198 (336)
T 1p5q_A 149 IVKERGTVYFKEG--------KYKQALLQYKKIVSWLEYESS------------F-SNEEAQK-AQAL--------RLAS 198 (336)
T ss_dssp HHHHHHHHHHHHT--------CHHHHHHHHHHHHHHTTTCCC------------C-CSHHHHH-HHHH--------HHHH
T ss_pred HHHHHHHHHHHCC--------CHHHHHHHHHHHHHHhhcccc------------C-ChHHHHH-HHHH--------HHHH
Confidence 4444444555555 799999999887663221100 0 1122221 1111 2457
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 140 y~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
|..+-.+|.+.|++++|...|+...... ..+...|..+-.+|...|+.++|+..|++....
T Consensus 199 ~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 259 (336)
T 1p5q_A 199 HLNLAMCHLKLQAFSAAIESCNKALELD-SNNEKGLSRRGEAHLAVNDFELARADFQKVLQL 259 (336)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 8888899999999999999999988764 236788999999999999999999999998764
No 124
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=96.83 E-value=0.015 Score=46.96 Aligned_cols=111 Identities=10% Similarity=-0.001 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcC--CCCC
Q 010790 59 HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN--VVPR 136 (501)
Q Consensus 59 ~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~g--i~P~ 136 (501)
..|..+-..+...+ ++++|...|+...... +.+...+..+...|...|++++|...+++. .... ..++
T Consensus 5 ~~~~~l~~~~~~~~--------~~~~A~~~~~~a~~~~-~~~~~~~~~la~~~~~~~~~~~A~~~~~~~-~~~~~~~~~~ 74 (131)
T 1elr_A 5 LKEKELGNDAYKKK--------DFDTALKHYDKAKELD-PTNMTYITNQAAVYFEKGDYNKCRELCEKA-IEVGRENRED 74 (131)
T ss_dssp HHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHHHHSTTC
T ss_pred HHHHHHHHHHHHhc--------CHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHhccHHHHHHHHHHH-Hhhccccchh
Confidence 34555555666666 8999999999987753 346788899999999999999999999988 4321 1122
Q ss_pred ----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 137 ----LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 137 ----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
..+|..+-..|.+.|+.++|...|+..... .|+...+..+-..
T Consensus 75 ~~~~~~~~~~la~~~~~~~~~~~A~~~~~~~~~~--~~~~~~~~~l~~~ 121 (131)
T 1elr_A 75 YRQIAKAYARIGNSYFKEEKYKDAIHFYNKSLAE--HRTPDVLKKCQQA 121 (131)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHh--CCCHHHHHHHHHH
Confidence 677888888999999999999999998875 4566555555443
No 125
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.77 E-value=0.011 Score=49.58 Aligned_cols=95 Identities=9% Similarity=-0.105 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC----
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLR-LS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN---- 95 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~-p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~---- 95 (501)
.+..+-..|...|++++|+..|++..+..-. ++ ..++..+-..+...+ ++++|.+.|++....
T Consensus 11 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 11 AFGNLGNTHYLLGNFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLG--------EFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHHh
Confidence 6777888888999999999999886643110 11 123333333444444 566666666664431
Q ss_pred CCCC-CHHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 010790 96 NVIP-NEASVTSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 96 g~~p-d~~t~~~li~~~~~~g~~~~A~~l~~~M 127 (501)
+..+ ...++..+...+...|++++|...+++.
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a 115 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKH 115 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 1111 1334555555566666666666665554
No 126
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.77 E-value=0.022 Score=49.09 Aligned_cols=99 Identities=11% Similarity=0.001 Sum_probs=80.4
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
+...+..+-..+...|++++|...|++. .... +-+...|..+-.+|.+.|++++|...|+...... .-+...|..+-
T Consensus 10 ~a~~~~~~g~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg 86 (164)
T 3sz7_A 10 ESDKLKSEGNAAMARKEYSKAIDLYTQA-LSIA-PANPIYLSNRAAAYSASGQHEKAAEDAELATVVD-PKYSKAWSRLG 86 (164)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CcCHHHHHHHHHHHHHccCHHHHHHHHHHHHHhC-CCCHHHHHHHH
Confidence 4556777888899999999999999988 4332 1266788888889999999999999999987754 22577889999
Q ss_pred HHHHhcCChHHHHHHHHHHHhC
Q 010790 180 KVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..|.+.|+.++|...|++....
T Consensus 87 ~~~~~~g~~~~A~~~~~~al~~ 108 (164)
T 3sz7_A 87 LARFDMADYKGAKEAYEKGIEA 108 (164)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHccCHHHHHHHHHHHHHh
Confidence 9999999999999999887654
No 127
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.76 E-value=0.018 Score=49.80 Aligned_cols=103 Identities=9% Similarity=-0.078 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
...+..+-..+.+.|++++|...|+.. ... .| +...|..+=.+|.+.|+.++|...|+......- -+...|..+-
T Consensus 36 ~~~~~~lg~~~~~~g~~~eA~~~~~~a-l~~--~P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~al~l~P-~~~~~~~~lg 111 (151)
T 3gyz_A 36 MDDIYSYAYDFYNKGRIEEAEVFFRFL-CIY--DFYNVDYIMGLAAIYQIKEQFQQAADLYAVAFALGK-NDYTPVFHTG 111 (151)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSS-SCCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCCHHHHHHHHHHHHHHccHHHHHHHHHHHHhhCC-CCcHHHHHHH
Confidence 446777788889999999999999998 432 24 567788888899999999999999999877532 2567889999
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCCCHHH
Q 010790 180 KVSAETGRVEKVYQYLQKLRSTVRCVNEET 209 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t 209 (501)
.+|.+.|+.++|...|++.... .|+...
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l--~~~~~~ 139 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQH--SNDEKL 139 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH--CCCHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHh--CCCHHH
Confidence 9999999999999999998765 355543
No 128
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.76 E-value=0.029 Score=45.78 Aligned_cols=97 Identities=9% Similarity=-0.052 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
..+..+-..+.+.|++++|...|++. .... +.+...|..+-.+|.+.|+.++|...|+...... .-+...|..+-.+
T Consensus 5 ~~~~~~g~~~~~~~~~~~A~~~~~~a-l~~~-p~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~lg~~ 81 (126)
T 3upv_A 5 EEARLEGKEYFTKSDWPNAVKAYTEM-IKRA-PEDARGYSNRAAALAKLMSFPEAIADCNKAIEKD-PNFVRAYIRKATA 81 (126)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHH-HHhC-CCChHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCcHHHHHHHHHH
Confidence 45667777888999999999999988 4332 2356788888889999999999999999887753 2256788889999
Q ss_pred HHhcCChHHHHHHHHHHHhC
Q 010790 182 SAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~~ 201 (501)
+...|+.++|...|++....
T Consensus 82 ~~~~~~~~~A~~~~~~al~~ 101 (126)
T 3upv_A 82 QIAVKEYASALETLDAARTK 101 (126)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHhCHHHHHHHHHHHHHh
Confidence 99999999999999887654
No 129
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=96.76 E-value=0.051 Score=62.74 Aligned_cols=148 Identities=13% Similarity=0.160 Sum_probs=91.3
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
...|..++..|.+.|++++|.+.|...++.. +++...+.+..+|++.+ ++++.... .. .++..
T Consensus 1134 ~say~eVa~~~~~lGkyEEAIeyL~mArk~~--~e~~Idt~LafaYAKl~--------rleele~f----I~---~~n~a 1196 (1630)
T 1xi4_A 1134 PSSYMEVVQAANTSGNWEELVKYLQMARKKA--RESYVETELIFALAKTN--------RLAELEEF----IN---GPNNA 1196 (1630)
T ss_pred hHHHHHHHHHHHHcCCHHHHHHHHHHHHhhc--ccccccHHHHHHHHhhc--------CHHHHHHH----Hh---CCCHH
Confidence 3467779999999999999999998766544 22222233666666665 44432222 11 24445
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHH-----------------
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGL----------------- 165 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~----------------- 165 (501)
.|..+-..|...|++++|..+|... . .|..+...|++.|+++.|.+.+.+-..
T Consensus 1197 d~~~iGd~le~eg~YeeA~~~Y~kA-~---------ny~rLA~tLvkLge~q~AIEaarKA~n~~aWkev~~acve~~Ef 1266 (1630)
T 1xi4_A 1197 HIQQVGDRCYDEKMYDAAKLLYNNV-S---------NFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFACVDGKEF 1266 (1630)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhh-h---------HHHHHHHHHHHhCCHHHHHHHHHHhCCHHHHHHHHHHHhhhhHH
Confidence 5555556666666666666666654 1 555566666666666665555543211
Q ss_pred -------CCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 010790 166 -------MGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197 (501)
Q Consensus 166 -------~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~ 197 (501)
.++..+...+..++..|.+.|.+++|+.+|+.
T Consensus 1267 ~LA~~cgl~Iiv~~deLeeli~yYe~~G~feEAI~LlE~ 1305 (1630)
T 1xi4_A 1267 RLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEA 1305 (1630)
T ss_pred HHHHHHHHhhhcCHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 01233555677888889899999999988854
No 130
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=96.76 E-value=0.022 Score=54.66 Aligned_cols=146 Identities=8% Similarity=-0.041 Sum_probs=104.9
Q ss_pred HHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhH
Q 010790 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTY 140 (501)
Q Consensus 61 y~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty 140 (501)
+-.+-..+...| ++++|...|++...... -+...+..+...+.+.|++++|..++++. .. ..|+....
T Consensus 120 ~~~~a~~~~~~g--------~~~~A~~~~~~al~~~P-~~~~a~~~la~~~~~~g~~~~A~~~l~~~-~~--~~p~~~~~ 187 (287)
T 3qou_A 120 XAQQAMQLMQES--------NYTDALPLLXDAWQLSN-QNGEIGLLLAETLIALNRSEDAEAVLXTI-PL--QDQDTRYQ 187 (287)
T ss_dssp HHHHHHHHHHTT--------CHHHHHHHHHHHHHHTT-SCHHHHHHHHHHHHHTTCHHHHHHHHTTS-CG--GGCSHHHH
T ss_pred HHHHHHHHHhCC--------CHHHHHHHHHHHHHhCC-cchhHHHHHHHHHHHCCCHHHHHHHHHhC-ch--hhcchHHH
Confidence 333334556666 89999999999877432 26778899999999999999999999998 33 34665433
Q ss_pred HHHHH-HHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCC-CCHHHHHHHHHHhc
Q 010790 141 DPALF-CFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC-VNEETGKIIEDWFS 218 (501)
Q Consensus 141 ~~lI~-~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~-p~~~t~~~i~~~f~ 218 (501)
..... .+.+.++.+.|...|++..... ..+...+..|-..|.+.|+.++|+..|.+.....-. .+......+...+.
T Consensus 188 ~~~~~~~l~~~~~~~~a~~~l~~al~~~-P~~~~~~~~la~~l~~~g~~~~A~~~l~~~l~~~p~~~~~~a~~~l~~~~~ 266 (287)
T 3qou_A 188 GLVAQIELLXQAADTPEIQQLQQQVAEN-PEDAALATQLALQLHQVGRNEEALELLFGHLRXDLTAADGQTRXTFQEILA 266 (287)
T ss_dssp HHHHHHHHHHHHTSCHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTGGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHhhcccCccHHHHHHHHhcC-CccHHHHHHHHHHHHHcccHHHHHHHHHHHHhcccccccchHHHHHHHHHH
Confidence 33322 3567788888998888877653 236788999999999999999999999998775321 11334455555553
Q ss_pred c
Q 010790 219 G 219 (501)
Q Consensus 219 ~ 219 (501)
.
T Consensus 267 ~ 267 (287)
T 3qou_A 267 A 267 (287)
T ss_dssp H
T ss_pred H
Confidence 3
No 131
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.75 E-value=0.021 Score=48.85 Aligned_cols=99 Identities=10% Similarity=-0.076 Sum_probs=79.5
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
+...+..+...+...|++++|...|+.. .... +.+...|..+=.+|...|+.++|...|+...... +-+...|..+-
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~l~-p~~~~~~~~lg 96 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQAL-CVLD-HYDSRFFLGLGACRQAMGQYDLAIHSYSYGAVMD-IXEPRFPFHAA 96 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCTHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHH-HHcC-cccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCchHHHHHH
Confidence 3456677888899999999999999988 4321 1366777778888999999999999999987653 22567888899
Q ss_pred HHHHhcCChHHHHHHHHHHHhC
Q 010790 180 KVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
.+|...|+.++|...|++....
T Consensus 97 ~~~~~~g~~~~A~~~~~~al~~ 118 (148)
T 2vgx_A 97 ECLLQXGELAEAESGLFLAQEL 118 (148)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHH
Confidence 9999999999999999887653
No 132
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=96.71 E-value=0.012 Score=49.30 Aligned_cols=133 Identities=11% Similarity=-0.034 Sum_probs=93.8
Q ss_pred HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-CC----HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCC
Q 010790 60 HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-PN----EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVV 134 (501)
Q Consensus 60 ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-pd----~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~ 134 (501)
++..+-..+...+ ++++|...|.+....... ++ ..++..+...+...|++++|...+++......-.
T Consensus 11 ~~~~l~~~~~~~~--------~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 82 (164)
T 3ro3_A 11 AFGNLGNTHYLLG--------NFRDAVIAHEQRLLIAKEFGDKAAERIAYSNLGNAYIFLGEFETASEYYKKTLLLARQL 82 (164)
T ss_dssp HHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHh
Confidence 3444444566666 799999999887653111 12 2478889999999999999999999862211111
Q ss_pred CC----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC----CCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 135 PR----LRTYDPALFCFCENLEAEKAYEVEEHMGLM----GLSL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 135 P~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~----gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
++ ..++..+-..|...|+.++|...+++.... +..+ ....+..+-..|...|+.++|...+++..+
T Consensus 83 ~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~a~~ 157 (164)
T 3ro3_A 83 KDRAVEAQSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELKDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 157 (164)
T ss_dssp TCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHccchHhHHHHHHHHHHHHHHccCHHHHHHHHHHHHH
Confidence 12 456777778888999999999999887542 2111 234677788889999999999999987654
No 133
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.70 E-value=0.025 Score=47.59 Aligned_cols=97 Identities=11% Similarity=-0.032 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
..+..+...+.+.|++++|...|+.. .... +.+...|..+-.+|.+.|+.++|...|+......- -+...|..+-.+
T Consensus 19 ~~~~~~a~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p-~~~~~~~~lg~~ 95 (142)
T 2xcb_A 19 EQLYALGFNQYQAGKWDDAQKIFQAL-CMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYGALMDI-NEPRFPFHAAEC 95 (142)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccHHHHHHHHHHH-HHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCC-CCcHHHHHHHHH
Confidence 34556667788899999999999988 4321 12566777777888999999999999998877532 255678888889
Q ss_pred HHhcCChHHHHHHHHHHHhC
Q 010790 182 SAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~~ 201 (501)
|...|+.++|...|++....
T Consensus 96 ~~~~g~~~~A~~~~~~al~~ 115 (142)
T 2xcb_A 96 HLQLGDLDGAESGFYSARAL 115 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHh
Confidence 99999999999999887653
No 134
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=96.69 E-value=0.054 Score=43.99 Aligned_cols=100 Identities=14% Similarity=-0.011 Sum_probs=75.6
Q ss_pred HHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh----hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC----HHHHHH
Q 010790 106 SVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE----QQEIAA 177 (501)
Q Consensus 106 ~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd----~~t~~~ 177 (501)
.+...+...|++++|...|++. ... .|+. ..+..+-..|.+.|+.++|...|+...... |+ ...+..
T Consensus 7 ~~a~~~~~~~~~~~A~~~~~~~-~~~--~p~~~~~~~~~~~lg~~~~~~~~~~~A~~~~~~~~~~~--p~~~~~~~~~~~ 81 (129)
T 2xev_A 7 NVAFDALKNGKYDDASQLFLSF-LEL--YPNGVYTPNALYWLGESYYATRNFQLAEAQFRDLVSRY--PTHDKAAGGLLK 81 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH-HHH--CSSSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TTSTTHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHH-HHH--CCCCcccHHHHHHHHHHHHHhccHHHHHHHHHHHHHHC--CCCcccHHHHHH
Confidence 3556677899999999999988 432 1443 366677778889999999999999987653 33 566788
Q ss_pred HHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHH
Q 010790 178 LLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKI 212 (501)
Q Consensus 178 Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~ 212 (501)
+-..+.+.|+.++|...|++.... .|+......
T Consensus 82 la~~~~~~g~~~~A~~~~~~~~~~--~p~~~~~~~ 114 (129)
T 2xev_A 82 LGLSQYGEGKNTEAQQTLQQVATQ--YPGSDAARV 114 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH--STTSHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH--CCCChHHHH
Confidence 888899999999999999988765 365544433
No 135
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.68 E-value=0.07 Score=44.12 Aligned_cols=101 Identities=9% Similarity=-0.052 Sum_probs=80.1
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
.+...=..|.+.|++++|.+.|++. .+.. +.+...|..+-.+|.+.|+.++|...|+.....+- .+...|..+-.+|
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~ 91 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEA-VKRD-PENAILYSNRAACLTKLMEFQRALDDCDTCIRLDS-KFIKGYIRKAACL 91 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCCHHHHHHHhhHHHhhccHHHHHHHHHHHHHhhh-hhhHHHHHHHHHH
Confidence 4555667888999999999999987 4331 23567888888899999999999999998876532 2567899999999
Q ss_pred HhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 183 AETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
...|+.++|.+.|++..+. .|+..
T Consensus 92 ~~~~~~~~A~~~~~~al~l--~P~~~ 115 (126)
T 4gco_A 92 VAMREWSKAQRAYEDALQV--DPSNE 115 (126)
T ss_dssp HHTTCHHHHHHHHHHHHHH--CTTCH
T ss_pred HHCCCHHHHHHHHHHHHHH--CcCCH
Confidence 9999999999999987654 45543
No 136
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=96.66 E-value=0.0086 Score=51.40 Aligned_cols=138 Identities=9% Similarity=-0.021 Sum_probs=98.4
Q ss_pred HHhcCCHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 010790 33 CTKSKDLTTAISLYESAHSQNLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLA 111 (501)
Q Consensus 33 ~~k~g~~~~A~~lf~~m~~~gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~ 111 (501)
+...|++++|++.|...... .|+ ...+-.|=..|...+ ++++|.+.|++..+.. +-+..+|..+-..|
T Consensus 7 ~~~~~~~e~ai~~~~~a~~~--~p~~~~~~~~la~~y~~~~--------~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~ 75 (150)
T 4ga2_A 7 RRSKADVERYIASVQGSTPS--PRQKSIKGFYFAKLYYEAK--------EYDLAKKYICTYINVQ-ERDPKAHRFLGLLY 75 (150)
T ss_dssp CCCHHHHHHHHHHHHHHSCS--HHHHHTTHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHH
T ss_pred HHHcChHHHHHHHHHHhccc--CcccHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-CCCHHHHHHHHHHH
Confidence 44568899999999876543 232 223333444777777 8999999999987743 23678899999999
Q ss_pred HhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHHH-HHHHHHCCCCC-CHHHHHHHHHHHHhcC
Q 010790 112 ASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYEV-EEHMGLMGLSL-EQQEIAALLKVSAETG 186 (501)
Q Consensus 112 ~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~l-f~~M~~~gv~p-d~~t~~~Li~~~~~~g 186 (501)
...|++++|...|++. .+. .|+ ...|..+-..|.+.|+.++|.+. ++...+. .| +...|...-..+...|
T Consensus 76 ~~~~~~~~A~~~~~~a-l~~--~p~~~~~~~~la~~~~~~~~~~~aa~~~~~~al~l--~P~~~~~~~l~~~ll~~~G 148 (150)
T 4ga2_A 76 ELEENTDKAVECYRRS-VEL--NPTQKDLVLKIAELLCKNDVTDGRAKYWVERAAKL--FPGSPAVYKLKEQLLDCEG 148 (150)
T ss_dssp HHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHH--STTCHHHHHHHHHHHHTCC
T ss_pred HHcCchHHHHHHHHHH-HHh--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHHHh--CcCCHHHHHHHHHHHHHhC
Confidence 9999999999999998 432 354 57788888899999998876655 4665543 34 4556665555555555
No 137
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=96.66 E-value=0.064 Score=51.15 Aligned_cols=119 Identities=14% Similarity=0.025 Sum_probs=88.1
Q ss_pred hHHHHHHHHHHHHhCC-CCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCC-CCC----hhhHHHHHHHHHHc
Q 010790 81 ALRHGFRVFDQMLSNN-VIPNE----ASVTSVARLAASKNDGDYAFVLIKRMNNEFNV-VPR----LRTYDPALFCFCEN 150 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g-~~pd~----~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi-~P~----~~ty~~lI~~~~~~ 150 (501)
++++|..++++..... ..|+. ..+..+...+...|+.++|...|.+. ..... .++ ..+|+.+-..|...
T Consensus 90 ~y~~a~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Ai~~~~~a-l~~~~~~~~~~~~~~~~~~lg~~y~~~ 168 (293)
T 3u3w_A 90 RYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKL-LNQQLTGIDVYQNLYIENAIANIYAEN 168 (293)
T ss_dssp CHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHH-HHTCCCCSCTTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhccccCChHHHHHHHHHHHHHHHHHcccCHHHHHHHHHHH-HHHhcccccHHHHHHHHHHHHHHHHHc
Confidence 7999999999987742 22332 23445666777788999999999998 54222 233 23688888899999
Q ss_pred CCHHHHHHHHHHHHH----C-CCCCCH-HHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 151 LEAEKAYEVEEHMGL----M-GLSLEQ-QEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 151 g~~~~A~~lf~~M~~----~-gv~pd~-~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
|+.++|...|+.... . +..+.. .+|..+...|.+.|+.++|+..+++..+
T Consensus 169 g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~A~~~~~~al~ 224 (293)
T 3u3w_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 999999999999873 1 222222 3788889999999999999999987643
No 138
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=96.65 E-value=0.08 Score=41.58 Aligned_cols=97 Identities=9% Similarity=-0.038 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh
Q 010790 59 HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR 138 (501)
Q Consensus 59 ~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ 138 (501)
..+..+-..+...+ ++++|...|+...... +.+...+..+...+...|++++|...+++. .... +.+..
T Consensus 5 ~~~~~~~~~~~~~~--------~~~~A~~~~~~~~~~~-~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~-~~~~-~~~~~ 73 (118)
T 1elw_A 5 NELKEKGNKALSVG--------NIDDALQCYSEAIKLD-PHNHVLYSNRSAAYAKKGDYQKAYEDGCKT-VDLK-PDWGK 73 (118)
T ss_dssp HHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHC-TTCHH
T ss_pred HHHHHHHHHHHHcc--------cHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHhhccHHHHHHHHHHH-HHhC-cccHH
Confidence 34555555666666 8999999999987743 236788899999999999999999999998 4432 23567
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 139 TYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 139 ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
.+..+-..|...|+.++|...|+.....
T Consensus 74 ~~~~~a~~~~~~~~~~~A~~~~~~~~~~ 101 (118)
T 1elw_A 74 GYSRKAAALEFLNRFEEAKRTYEEGLKH 101 (118)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHc
Confidence 8888889999999999999999998765
No 139
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.64 E-value=0.11 Score=42.94 Aligned_cols=94 Identities=9% Similarity=-0.034 Sum_probs=67.0
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~ 98 (501)
...+..+-..+.+.|++++|+..|++..+.. |+ ...|..+-..+...+ ++++|...|+...... +
T Consensus 28 ~~~~~~~a~~~~~~~~~~~A~~~~~~a~~~~--~~~~~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~~~~~~-~ 96 (148)
T 2dba_A 28 VEQLRKEGNELFKCGDYGGALAAYTQALGLD--ATPQDQAVLHRNRAACHLKLE--------DYDKAETEASKAIEKD-G 96 (148)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHHHHHHHTSC--CCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHT-S
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHc--ccchHHHHHHHHHHHHHHHHc--------cHHHHHHHHHHHHhhC-c
Confidence 3577888888899999999999999887643 44 344544444556666 7788888887766542 2
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 010790 99 PNEASVTSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~~~~A~~l~~~M 127 (501)
.+...+..+..+|...|+.++|...|++.
T Consensus 97 ~~~~~~~~~a~~~~~~~~~~~A~~~~~~a 125 (148)
T 2dba_A 97 GDVKALYRRSQALEKLGRLDQAVLDLQRC 125 (148)
T ss_dssp CCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 24666777777777788888888777776
No 140
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=96.64 E-value=0.016 Score=55.78 Aligned_cols=129 Identities=9% Similarity=-0.146 Sum_probs=71.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC---
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN--- 100 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd--- 100 (501)
...-.....+...|++++|.++|+.+...+ |+....-.+-..+.+.+ ++++|+..|+..... |+
T Consensus 103 dl~LayA~~L~~~g~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~--------r~~dA~~~l~~a~~~---~d~~~ 169 (282)
T 4f3v_A 103 AITMGFAACEAAQGNYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAE--------RWTDVIDQVKSAGKW---PDKFL 169 (282)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTT--------CHHHHHHHHTTGGGC---SCHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcC--------CHHHHHHHHHHhhcc---CCccc
Confidence 344455666777788888888887766543 43322222222445555 677777777643221 21
Q ss_pred -HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh--hhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 101 -EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL--RTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 101 -~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~--~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
...+..+=.++...|++++|+..|++. ......|.. ......-.++.+.|+.++|..+|+++...
T Consensus 170 ~~~a~~~LG~al~~LG~~~eAl~~l~~a-~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~ 237 (282)
T 4f3v_A 170 AGAAGVAHGVAAANLALFTEAERRLTEA-NDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT 237 (282)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHH-HTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHH-hcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 124555566677777777777777776 433222432 12333333455666777777777666553
No 141
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=96.64 E-value=0.016 Score=50.77 Aligned_cols=126 Identities=11% Similarity=-0.032 Sum_probs=92.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-HHhCCCCCCCChhhHHHHHHHHHHHHhCCCCC-CH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYL-CSDSATDPSSKDSALRHGFRVFDQMLSNNVIP-NE 101 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~-c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p-d~ 101 (501)
..+..+-..|.+.|++++|+..|+...... |+...+..+... +.... ...+|...|++..+. .| +.
T Consensus 41 ~a~~~la~~~~~~g~~~~A~~~~~~a~~~~--p~~~~~~~~~~~~~~~~~--------~~~~a~~~~~~al~~--~P~~~ 108 (176)
T 2r5s_A 41 DVKLAKADCLLETKQFELAQELLATIPLEY--QDNSYKSLIAKLELHQQA--------AESPELKRLEQELAA--NPDNF 108 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHTTCCGGG--CCHHHHHHHHHHHHHHHH--------TSCHHHHHHHHHHHH--STTCH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHhhhcc--CChHHHHHHHHHHHHhhc--------ccchHHHHHHHHHHh--CCCCH
Confidence 467788888999999999999999876433 344333322111 11111 122367778877663 34 57
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
..+..+...+...|+.++|...|.++ ... .|+ ...+..+...|...|+.++|...|++..
T Consensus 109 ~~~~~la~~~~~~g~~~~A~~~~~~~-l~~--~p~~~~~~a~~~l~~~~~~~g~~~~A~~~y~~al 171 (176)
T 2r5s_A 109 ELACELAVQYNQVGRDEEALELLWNI-LKV--NLGAQDGEVKKTFMDILSALGQGNAIASKYRRQL 171 (176)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HTT--CTTTTTTHHHHHHHHHHHHHCSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHH-HHh--CcccChHHHHHHHHHHHHHhCCCCcHHHHHHHHH
Confidence 88999999999999999999999998 443 344 4578899999999999999999998764
No 142
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=96.62 E-value=0.097 Score=47.45 Aligned_cols=143 Identities=13% Similarity=-0.016 Sum_probs=111.1
Q ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC----
Q 010790 40 TTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN---- 115 (501)
Q Consensus 40 ~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g---- 115 (501)
.+|+..|.+..+.|- +..+..|=..+...+ +.++|++.|++..+.| +...+..|-..|.. +
T Consensus 3 ~eA~~~~~~aa~~g~---~~a~~~lg~~~~~~~--------~~~~A~~~~~~a~~~g---~~~a~~~lg~~y~~-~g~~~ 67 (212)
T 3rjv_A 3 TEPGSQYQQQAEAGD---RRAQYYLADTWVSSG--------DYQKAEYWAQKAAAQG---DGDALALLAQLKIR-NPQQA 67 (212)
T ss_dssp -CTTHHHHHHHHTTC---HHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHTT---CHHHHHHHHHHTTS-STTSC
T ss_pred chHHHHHHHHHHCCC---HHHHHHHHHHHhcCC--------CHHHHHHHHHHHHHcC---CHHHHHHHHHHHHc-CCCCC
Confidence 357888888888764 455555555555555 7999999999998876 56677778888887 7
Q ss_pred CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHh----cC
Q 010790 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLS-LEQQEIAALLKVSAE----TG 186 (501)
Q Consensus 116 ~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~-pd~~t~~~Li~~~~~----~g 186 (501)
+.++|+..|... .+.| +...+..|=..|.. .++.++|.+.|+.....|.. .....+..|-..|.. .+
T Consensus 68 ~~~~A~~~~~~A-~~~g---~~~a~~~Lg~~y~~g~g~~~d~~~A~~~~~~A~~~~~~~~~~~a~~~Lg~~y~~g~g~~~ 143 (212)
T 3rjv_A 68 DYPQARQLAEKA-VEAG---SKSGEIVLARVLVNRQAGATDVAHAITLLQDAARDSESDAAVDAQMLLGLIYASGVHGPE 143 (212)
T ss_dssp CHHHHHHHHHHH-HHTT---CHHHHHHHHHHHTCGGGSSCCHHHHHHHHHHHTSSTTSHHHHHHHHHHHHHHHHTSSSSC
T ss_pred CHHHHHHHHHHH-HHCC---CHHHHHHHHHHHHcCCCCccCHHHHHHHHHHHHHcCCCcchHHHHHHHHHHHHcCCCCCC
Confidence 899999999998 6654 55667777667766 78999999999998876532 026788888888888 78
Q ss_pred ChHHHHHHHHHHHhC
Q 010790 187 RVEKVYQYLQKLRST 201 (501)
Q Consensus 187 ~~~~a~~ll~~M~~~ 201 (501)
+.++|+.+|++-.+.
T Consensus 144 d~~~A~~~~~~A~~~ 158 (212)
T 3rjv_A 144 DDVKASEYFKGSSSL 158 (212)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHc
Confidence 999999999998776
No 143
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=96.62 E-value=0.017 Score=51.18 Aligned_cols=133 Identities=8% Similarity=-0.128 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHh----CCCCCC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC---
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHS----QNLRLS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN--- 95 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~----~gv~p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~--- 95 (501)
..++.+-..|...|++++|+..|++..+ .+..|. ...+..+-..+...+ ++++|.+.|++....
T Consensus 27 ~~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~~~ 98 (203)
T 3gw4_A 27 GARFMLGYVYAFMDRFDEARASFQALQQQAQKSGDHTAEHRALHQVGMVERMAG--------NWDAARRCFLEERELLAS 98 (203)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHHH
Confidence 4788888899999999999999998764 223222 334555545666777 899999999886552
Q ss_pred -CCCC--CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh----hhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 96 -NVIP--NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----RTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 96 -g~~p--d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
+-.| ...++..+-..+...|++++|...+++......-.++. .++..+-..|...|+.++|...+++..
T Consensus 99 ~~~~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~al 174 (203)
T 3gw4_A 99 LPEDPLAASANAYEVATVALHFGDLAGARQEYEKSLVYAQQADDQVAIACAFRGLGDLAQQEKNLLEAQQHWLRAR 174 (203)
T ss_dssp SCCCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cCccHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 2122 24567888889999999999999998872211111222 345677778889999999999887764
No 144
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=96.48 E-value=0.036 Score=43.28 Aligned_cols=94 Identities=10% Similarity=-0.034 Sum_probs=62.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-CCHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-PNEAS 103 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-pd~~t 103 (501)
.|..+-..+.+.|++++|+..|++..+..- .+...|..+-..+...+ ++++|.+.|++..+.... .+...
T Consensus 8 ~~~~~~~~~~~~~~~~~A~~~~~~a~~~~~-~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~a~~~~~~~~~~~~ 78 (112)
T 2kck_A 8 EYYLEGVLQYDAGNYTESIDLFEKAIQLDP-EESKYWLMKGKALYNLE--------RYEEAVDCYNYVINVIEDEYNKDV 78 (112)
T ss_dssp GGGGHHHHHHSSCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTSCCTTCHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhCc-CCHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHHhCcccchHHH
Confidence 455666677778888888888887665431 23455555555555555 677777777777664211 14667
Q ss_pred HHHHHHHHHhC-CCHHHHHHHHHHh
Q 010790 104 VTSVARLAASK-NDGDYAFVLIKRM 127 (501)
Q Consensus 104 ~~~li~~~~~~-g~~~~A~~l~~~M 127 (501)
+..+...+... |+.++|.+.+...
T Consensus 79 ~~~l~~~~~~~~~~~~~A~~~~~~~ 103 (112)
T 2kck_A 79 WAAKADALRYIEGKEVEAEIAEARA 103 (112)
T ss_dssp HHHHHHHHTTCSSCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 77777777777 7777777777777
No 145
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=96.45 E-value=0.014 Score=63.58 Aligned_cols=148 Identities=7% Similarity=-0.103 Sum_probs=112.5
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+-..|.+.|++++|+..|+++.+..- -+...|..+=.++...+ ++++|.+.|++..+... -+...
T Consensus 434 ~~~~~~a~~~~~~g~~~~A~~~~~~al~~~p-~~~~a~~~lg~~~~~~g--------~~~~A~~~~~~al~l~P-~~~~~ 503 (681)
T 2pzi_A 434 ELPLMEVRALLDLGDVAKATRKLDDLAERVG-WRWRLVWYRAVAELLTG--------DYDSATKHFTEVLDTFP-GELAP 503 (681)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHST-TCSHH
T ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHhccCc-chHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCC-CChHH
Confidence 4677778889999999999999999886431 24456666655666666 89999999999877432 25678
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLE-QQEIAALLKV 181 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd-~~t~~~Li~~ 181 (501)
|..+-.+|.+.|++++ .+.|++. .+. .| +...|..+-.+|.+.|+.++|.+.|++.... .|+ ...|..+..+
T Consensus 504 ~~~lg~~~~~~g~~~~-~~~~~~a-l~~--~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~~~~~ 577 (681)
T 2pzi_A 504 KLALAATAELAGNTDE-HKFYQTV-WST--NDGVISAAFGLARARSAEGDRVGAVRTLDEVPPT--SRHFTTARLTSAVT 577 (681)
T ss_dssp HHHHHHHHHHHTCCCT-TCHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHTSCTT--STTHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCChHH-HHHHHHH-HHh--CCchHHHHHHHHHHHHHcCCHHHHHHHHHhhccc--CcccHHHHHHHHHH
Confidence 8899999999999999 9999988 432 24 5578888889999999999999999887643 455 4567777777
Q ss_pred HHhcCC
Q 010790 182 SAETGR 187 (501)
Q Consensus 182 ~~~~g~ 187 (501)
+...+.
T Consensus 578 ~~~~~~ 583 (681)
T 2pzi_A 578 LLSGRS 583 (681)
T ss_dssp TC----
T ss_pred HHccCC
Confidence 766554
No 146
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=96.42 E-value=0.14 Score=46.72 Aligned_cols=140 Identities=11% Similarity=0.023 Sum_probs=93.9
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-CCH-HHHHHHHHHHHhC----------CCCCCCChhhHHHHHHHHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLR-LSL-HHFNALLYLCSDS----------ATDPSSKDSALRHGFRVFDQ 91 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~-p~~-~ty~~LL~~c~~~----------~~~~~~k~~~~~~a~~lf~~ 91 (501)
..+..+...|.+.|+.++|+..|+++.+..-. +.. ..+-.+-..+... ....+...|..++|...|++
T Consensus 42 ~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~P~~~~~~~a~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~ 121 (225)
T 2yhc_A 42 QVQLDLIYAYYKNADLPLAQAAIDRFIRLNPTHPNIDYVMYMRGLTNMALDDSALQGFFGVDRSDRDPQQARAAFSDFSK 121 (225)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHC--------------CCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHCcCCCcHHHHHHHHHHHHHhhhhhhhhhhhccchhhcCcHHHHHHHHHHHH
Confidence 46677788999999999999999998864321 221 1221111122110 01122234589999999999
Q ss_pred HHhCCCCCCHHHH-----------------HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh----hhHHHHHHHHHHc
Q 010790 92 MLSNNVIPNEASV-----------------TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL----RTYDPALFCFCEN 150 (501)
Q Consensus 92 M~~~g~~pd~~t~-----------------~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~~~~~ 150 (501)
+.+.... +..++ -.+...|.+.|++++|...|+++.... |+. ..+..+..+|.+.
T Consensus 122 ~l~~~P~-~~~a~~a~~~l~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~l~~~---p~~~~~~~a~~~l~~~~~~~ 197 (225)
T 2yhc_A 122 LVRGYPN-SQYTTDATKRLVFLKDRLAKYEYSVAEYYTERGAWVAVVNRVEGMLRDY---PDTQATRDALPLMENAYRQM 197 (225)
T ss_dssp HHTTCTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS---TTSHHHHHHHHHHHHHHHHT
T ss_pred HHHHCcC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHC---cCCCccHHHHHHHHHHHHHc
Confidence 9875322 11122 234567888999999999999983333 553 4678888999999
Q ss_pred CCHHHHHHHHHHHHHCC
Q 010790 151 LEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~g 167 (501)
|+.++|.+.++.+...+
T Consensus 198 g~~~~A~~~~~~l~~~~ 214 (225)
T 2yhc_A 198 QMNAQAEKVAKIIAANS 214 (225)
T ss_dssp TCHHHHHHHHHHHHHCC
T ss_pred CCcHHHHHHHHHHHhhC
Confidence 99999999999887763
No 147
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=96.41 E-value=0.13 Score=44.26 Aligned_cols=94 Identities=14% Similarity=-0.029 Sum_probs=76.8
Q ss_pred HHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHH
Q 010790 66 YLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPAL 144 (501)
Q Consensus 66 ~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI 144 (501)
..+...| ++++|...|+...... +-+...|..+-.+|...|++++|...|++. ... .| +...|..+=
T Consensus 44 ~~~~~~g--------~~~eA~~~~~~al~~~-P~~~~~~~~lg~~~~~~g~~~~Ai~~~~~a-l~l--~P~~~~~~~~lg 111 (151)
T 3gyz_A 44 YDFYNKG--------RIEEAEVFFRFLCIYD-FYNVDYIMGLAAIYQIKEQFQQAADLYAVA-FAL--GKNDYTPVFHTG 111 (151)
T ss_dssp HHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH--SSSCCHHHHHHH
T ss_pred HHHHHcC--------CHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHHccHHHHHHHHHHH-Hhh--CCCCcHHHHHHH
Confidence 3556666 8999999999988753 236888999999999999999999999998 432 24 457888888
Q ss_pred HHHHHcCCHHHHHHHHHHHHHCCCCCCHH
Q 010790 145 FCFCENLEAEKAYEVEEHMGLMGLSLEQQ 173 (501)
Q Consensus 145 ~~~~~~g~~~~A~~lf~~M~~~gv~pd~~ 173 (501)
.+|.+.|+.++|...|+..... .|+..
T Consensus 112 ~~~~~lg~~~eA~~~~~~al~l--~~~~~ 138 (151)
T 3gyz_A 112 QCQLRLKAPLKAKECFELVIQH--SNDEK 138 (151)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHH--CCCHH
T ss_pred HHHHHcCCHHHHHHHHHHHHHh--CCCHH
Confidence 8999999999999999998875 35543
No 148
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.40 E-value=0.077 Score=47.19 Aligned_cols=158 Identities=7% Similarity=-0.099 Sum_probs=94.0
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-C---C-----
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-P---N----- 100 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-p---d----- 100 (501)
+.+..-.|+++.|.+.++.-..... -....+..+-..+...+ ++++|...|++....... | .
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~--------~~~~A~~~~~~al~~~~~~~~~~~~~~~~ 81 (198)
T 2fbn_A 11 SSGRENLYFQGAKKSIYDYTDEEKV-QSAFDIKEEGNEFFKKN--------EINEAIVKYKEALDFFIHTEEWDDQILLD 81 (198)
T ss_dssp -----------CCCSGGGCCHHHHH-HHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHTTTTCTTCCCHHHHH
T ss_pred hhhhhhhhhccccCchhhCCHHHHH-HHHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 3444445666666655543221100 01123333334555566 899999999998874222 2 1
Q ss_pred ------HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH
Q 010790 101 ------EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174 (501)
Q Consensus 101 ------~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t 174 (501)
..+|..+..+|...|++++|...++.. ... -+.+...|..+-.+|...|+.++|...|+...... .-+...
T Consensus 82 ~~~~~~~~~~~~la~~~~~~~~~~~A~~~~~~a-l~~-~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~-p~~~~~ 158 (198)
T 2fbn_A 82 KKKNIEISCNLNLATCYNKNKDYPKAIDHASKV-LKI-DKNNVKALYKLGVANMYFGFLEEAKENLYKAASLN-PNNLDI 158 (198)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH-STTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHS-TTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHh-CcccHHHHHHHHHHHHHcccHHHHHHHHHHHHHHC-CCcHHH
Confidence 278888999999999999999999998 443 22356788888889999999999999999887653 125566
Q ss_pred HHHHHHHHHhcCChHHHH-HHHHHHH
Q 010790 175 IAALLKVSAETGRVEKVY-QYLQKLR 199 (501)
Q Consensus 175 ~~~Li~~~~~~g~~~~a~-~ll~~M~ 199 (501)
+..+...+...++.+++. ..+..|-
T Consensus 159 ~~~l~~~~~~~~~~~~~~~~~~~~~f 184 (198)
T 2fbn_A 159 RNSYELCVNKLKEARKKDKLTFGGMF 184 (198)
T ss_dssp HHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777776666555554 4444443
No 149
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=96.40 E-value=0.0053 Score=50.00 Aligned_cols=82 Identities=4% Similarity=-0.139 Sum_probs=35.0
Q ss_pred hHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYE 158 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g--~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~ 158 (501)
++++|+..|++..+.+ -+-+..++..+-..|...|++++|...|++. .... +-+...+..+-.+|.+.|+.++|..
T Consensus 5 ~~~~A~~~~~~al~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a-l~~~-p~~~~~~~~l~~~~~~~g~~~~A~~ 82 (117)
T 3k9i_A 5 LEAQAVPYYEKAIASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANG-VKQF-PNHQALRVFYAMVLYNLGRYEQGVE 82 (117)
T ss_dssp --CCCHHHHHHHHSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred cHHHHHHHHHHHHHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCchHHHHHHHHHHHHcCCHHHHHH
Confidence 3444444444444432 1112334444444555555555555555544 2211 1123444444444555555555555
Q ss_pred HHHHHH
Q 010790 159 VEEHMG 164 (501)
Q Consensus 159 lf~~M~ 164 (501)
.|+...
T Consensus 83 ~~~~al 88 (117)
T 3k9i_A 83 LLLKII 88 (117)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 554443
No 150
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=96.37 E-value=0.093 Score=43.04 Aligned_cols=98 Identities=10% Similarity=-0.067 Sum_probs=79.7
Q ss_pred CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC
Q 010790 57 SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR 136 (501)
Q Consensus 57 ~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~ 136 (501)
+...|..+-..+...+ ++++|...|....... +.+...|..+...+...|++++|...|++. .... +.+
T Consensus 8 ~~~~~~~~g~~~~~~~--------~~~~A~~~~~~al~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a-l~~~-p~~ 76 (137)
T 3q49_B 8 SAQELKEQGNRLFVGR--------KYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRA-LELD-GQS 76 (137)
T ss_dssp CHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTC
T ss_pred cHHHHHHHHHHHHHhC--------cHHHHHHHHHHHHhhC-cCcHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhC-chh
Confidence 4566666666777777 8999999999987753 236788999999999999999999999998 4432 235
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
...|..+-..|...|+.++|...|+....
T Consensus 77 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 77 VKAHFFLGQCQLEMESYDEAIANLQRAYS 105 (137)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67888888999999999999999988764
No 151
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=96.36 E-value=0.15 Score=47.44 Aligned_cols=119 Identities=10% Similarity=0.025 Sum_probs=88.6
Q ss_pred hHHHHHHHHHHHHhCCCCC-C-HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHH--------
Q 010790 81 ALRHGFRVFDQMLSNNVIP-N-EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCE-------- 149 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~p-d-~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~-------- 149 (501)
++++|...|+.+....... . ...+..+...|.+.|++++|...|+.......-.|. ...+..+-.+|.+
T Consensus 30 ~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~A~~~~~~~l~~~p~~~~~~~a~~~lg~~~~~~~~~~~~~ 109 (261)
T 3qky_A 30 KYDRAIEYFKAVFTYGRTHEWAADAQFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELD 109 (261)
T ss_dssp CHHHHHHHHHHHGGGCSCSTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHCCCTTSC
T ss_pred CHHHHHHHHHHHHHhCCCCcchHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHCCCCchhHHHHHHHHHHHHHhccccccc
Confidence 7999999999998753221 1 567888889999999999999999998332211122 2445566667777
Q ss_pred cCCHHHHHHHHHHHHHCCCCCC-HHHH-----------------HHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 150 NLEAEKAYEVEEHMGLMGLSLE-QQEI-----------------AALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 150 ~g~~~~A~~lf~~M~~~gv~pd-~~t~-----------------~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
.|+.++|...|++..... |+ ...+ ..+-..|.+.|+.++|...|++....
T Consensus 110 ~~~~~~A~~~~~~~l~~~--p~~~~~~~a~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~~~~~l~~ 177 (261)
T 3qky_A 110 QTDTRKAIEAFQLFIDRY--PNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDA 177 (261)
T ss_dssp CHHHHHHHHHHHHHHHHC--TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHC--cCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 999999999999987652 32 2223 44567788999999999999998764
No 152
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=96.33 E-value=0.11 Score=44.59 Aligned_cols=94 Identities=12% Similarity=-0.038 Sum_probs=67.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
..|..+-..|.+.|++++|+..|++..+.. +-+...|..+-..+...+ ++++|+..|++..+.. +-+...
T Consensus 12 ~~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~l~~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~ 81 (164)
T 3sz7_A 12 DKLKSEGNAAMARKEYSKAIDLYTQALSIA-PANPIYLSNRAAAYSASG--------QHEKAAEDAELATVVD-PKYSKA 81 (164)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CcCHHHHHHHHHHHHHcc--------CHHHHHHHHHHHHHhC-CCCHHH
Confidence 366777778888888888888888877543 124555666655666666 7888888888776643 224677
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHh
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M 127 (501)
|..+-.+|...|++++|...|++.
T Consensus 82 ~~~lg~~~~~~g~~~~A~~~~~~a 105 (164)
T 3sz7_A 82 WSRLGLARFDMADYKGAKEAYEKG 105 (164)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccCHHHHHHHHHHH
Confidence 777888888888888888888777
No 153
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=96.31 E-value=0.063 Score=44.42 Aligned_cols=93 Identities=10% Similarity=-0.036 Sum_probs=54.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.+...=..|.+.|++++|+..|++..+.. +-+...|..+-..+...+ ++++|+..|+...+.. +.+...|
T Consensus 15 ~~~~~G~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~~~~~~~~~~--------~~~~A~~~~~~al~~~-p~~~~a~ 84 (126)
T 4gco_A 15 EEKNKGNEYFKKGDYPTAMRHYNEAVKRD-PENAILYSNRAACLTKLM--------EFQRALDDCDTCIRLD-SKFIKGY 84 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhC-CCCHHHHHHHhhHHHhhc--------cHHHHHHHHHHHHHhh-hhhhHHH
Confidence 55555566667777777777777665432 123445555444555555 6666666666655532 1245556
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M 127 (501)
..+-.+|...|++++|.+.|++.
T Consensus 85 ~~lg~~~~~~~~~~~A~~~~~~a 107 (126)
T 4gco_A 85 IRKAACLVAMREWSKAQRAYEDA 107 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCHHHHHHHHHHH
Confidence 66666666666666666666665
No 154
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=96.29 E-value=0.075 Score=47.26 Aligned_cols=130 Identities=12% Similarity=-0.006 Sum_probs=89.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCC-CC---C-----------HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNL-RL---S-----------LHHFNALLYLCSDSATDPSSKDSALRHGFRVF 89 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv-~p---~-----------~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf 89 (501)
.+..+-..+.+.|++++|+..|++..+..- .| . ...|..+-..+...+ ++++|+..|
T Consensus 40 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~~--------~~~~A~~~~ 111 (198)
T 2fbn_A 40 DIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNK--------DYPKAIDHA 111 (198)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTT--------CHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHhcccccchhhHHHHHHHHHHHHHHHHHHHHHHhc--------CHHHHHHHH
Confidence 566677788899999999999999886431 11 1 145555555666777 899999999
Q ss_pred HHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHH-HHHHHHHHC
Q 010790 90 DQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAY-EVEEHMGLM 166 (501)
Q Consensus 90 ~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~-~lf~~M~~~ 166 (501)
+...... +.+...+..+..+|...|++++|...|++. ... .| +...+..+-..+...++.+++. ..|..|...
T Consensus 112 ~~al~~~-p~~~~~~~~lg~~~~~~~~~~~A~~~~~~a-l~~--~p~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~f~~ 186 (198)
T 2fbn_A 112 SKVLKID-KNNVKALYKLGVANMYFGFLEEAKENLYKA-ASL--NPNNLDIRNSYELCVNKLKEARKKDKLTFGGMFDK 186 (198)
T ss_dssp HHHHHHS-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHH--STTCHHHHHHHHHHHHHHHHHHC------------
T ss_pred HHHHHhC-cccHHHHHHHHHHHHHcccHHHHHHHHHHH-HHH--CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 9987752 346788999999999999999999999988 433 24 4456666666776666666655 555555443
No 155
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=96.25 E-value=0.094 Score=43.29 Aligned_cols=106 Identities=13% Similarity=0.137 Sum_probs=78.0
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCC--CCCC----HHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMG--LSLE----QQEI 175 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~g--v~pd----~~t~ 175 (501)
++..+=..+.+.|++++|++.|++. .+. .| +...|+.+=.+|.+.|++++|.+.|+...... ..++ ..+|
T Consensus 10 a~~~lG~~~~~~~~~~~A~~~y~~A-l~~--~p~~~~~~~nlg~~~~~~~~~~~A~~~~~~al~~~~~~~~~~~~~a~~~ 86 (127)
T 4gcn_A 10 AEKDLGNAAYKQKDFEKAHVHYDKA-IEL--DPSNITFYNNKAAVYFEEKKFAECVQFCEKAVEVGRETRADYKLIAKAM 86 (127)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCCCHHHHHhHHHHHHHhhhHHHHHHHHHHHHHhCcccchhhHHHHHHH
Confidence 4556667888899999999999987 432 24 45778888888999999999999998876431 1112 2367
Q ss_pred HHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHH
Q 010790 176 AALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKII 213 (501)
Q Consensus 176 ~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i 213 (501)
..+-..+...|+.++|++.|++-... .|++.+...+
T Consensus 87 ~~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~~~l 122 (127)
T 4gcn_A 87 SRAGNAFQKQNDLSLAVQWFHRSLSE--FRDPELVKKV 122 (127)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH--SCCHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHhh--CcCHHHHHHH
Confidence 77777888899999999999886653 5676655443
No 156
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=96.19 E-value=0.12 Score=41.98 Aligned_cols=93 Identities=5% Similarity=-0.003 Sum_probs=44.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..+.+.|++++|+..|++..+.. +.+...|..+-..+...+ ++++|+..|+...+.. +-+...|
T Consensus 6 ~~~~~g~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~a~~~~~~~--------~~~~A~~~~~~al~~~-p~~~~~~ 75 (126)
T 3upv_A 6 EARLEGKEYFTKSDWPNAVKAYTEMIKRA-PEDARGYSNRAAALAKLM--------SFPEAIADCNKAIEKD-PNFVRAY 75 (126)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCChHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHhC-CCcHHHH
Confidence 34444445555566666666655554332 112334444433444444 4555555555544421 1134445
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M 127 (501)
..+-.++...|++++|...|++.
T Consensus 76 ~~lg~~~~~~~~~~~A~~~~~~a 98 (126)
T 3upv_A 76 IRKATAQIAVKEYASALETLDAA 98 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHH
Confidence 55555555555555555555544
No 157
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=96.12 E-value=0.14 Score=43.53 Aligned_cols=93 Identities=6% Similarity=-0.084 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.+..+-..+.+.|++++|+..|+...... +.+...|..+-..+...+ ++++|...|+....... -+...+
T Consensus 23 ~~~~~g~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~l~p-~~~~~~ 92 (148)
T 2vgx_A 23 QLYSLAFNQYQSGXYEDAHXVFQALCVLD-HYDSRFFLGLGACRQAMG--------QYDLAIHSYSYGAVMDI-XEPRFP 92 (148)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHST-TCTHHH
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHcC-cccHHHHHHHHHHHHHHh--------hHHHHHHHHHHHHhcCC-CCchHH
Confidence 33444445555555555555555544322 113333433333444444 55555555555544221 133444
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHh
Q 010790 105 TSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M 127 (501)
..+-.+|...|+.++|...|+..
T Consensus 93 ~~lg~~~~~~g~~~~A~~~~~~a 115 (148)
T 2vgx_A 93 FHAAECLLQXGELAEAESGLFLA 115 (148)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHH
Confidence 45555555555555555555554
No 158
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=96.09 E-value=0.16 Score=42.43 Aligned_cols=83 Identities=8% Similarity=-0.078 Sum_probs=68.7
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
++++|...|+...... +.+...|..+-.+|...|++++|...|+.. .... +-+...|..+-.+|...|+.++|...|
T Consensus 33 ~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~ 109 (142)
T 2xcb_A 33 KWDDAQKIFQALCMLD-HYDARYFLGLGACRQSLGLYEQALQSYSYG-ALMD-INEPRFPFHAAECHLQLGDLDGAESGF 109 (142)
T ss_dssp CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCTHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHHhhHHHHHHHHHHH-HhcC-CCCcHHHHHHHHHHHHcCCHHHHHHHH
Confidence 8999999999987743 236788889999999999999999999998 4432 234567788888999999999999999
Q ss_pred HHHHHC
Q 010790 161 EHMGLM 166 (501)
Q Consensus 161 ~~M~~~ 166 (501)
+.....
T Consensus 110 ~~al~~ 115 (142)
T 2xcb_A 110 YSARAL 115 (142)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 987654
No 159
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=96.07 E-value=0.37 Score=45.72 Aligned_cols=119 Identities=14% Similarity=0.017 Sum_probs=87.0
Q ss_pred hHHHHHHHHHHHHhCCCCCCH-----HHHHHHHHHHHhCCCHHHHHHHHHHhHhhcC---CCCC--hhhHHHHHHHHHHc
Q 010790 81 ALRHGFRVFDQMLSNNVIPNE-----ASVTSVARLAASKNDGDYAFVLIKRMNNEFN---VVPR--LRTYDPALFCFCEN 150 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~-----~t~~~li~~~~~~g~~~~A~~l~~~M~~~~g---i~P~--~~ty~~lI~~~~~~ 150 (501)
++++|.+.+.+..+.....+. ..+..+...+...|+.++|...+.+. .... ..+. ..+|+.+-..|...
T Consensus 90 ~y~~A~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a-l~~~~~~~~~~~~~~~~~~lg~~y~~~ 168 (293)
T 2qfc_A 90 RYKEIYNKVWNELKKEEYHPEFQQFLQWQYYVAAYVLKKVDYEYCILELKKL-LNQQLTGIDVYQNLYIENAIANIYAEN 168 (293)
T ss_dssp CHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHH-HTTCCCSSCTTHHHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH-HHHHhcCCchHHHHHHHHHHHHHHHHc
Confidence 799999999887765332211 22444666678889999999999887 4321 1112 35888888999999
Q ss_pred CCHHHHHHHHHHHHHC----CCCC--CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 151 LEAEKAYEVEEHMGLM----GLSL--EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~----gv~p--d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
|+.++|...|++.... +-.+ ...+|+.+...|.+.|+.++|+..+++...
T Consensus 169 ~~~~~A~~~~~kal~~~~~~~~~~~~~~~~~~nlg~~y~~~~~y~~Al~~~~kal~ 224 (293)
T 2qfc_A 169 GYLKKGIDLFEQILKQLEALHDNEEFDVKVRYNHAKALYLDSRYEESLYQVNKAIE 224 (293)
T ss_dssp TCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHhcCccccchHHHHHhHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999887621 1111 125888999999999999999999988654
No 160
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=96.04 E-value=0.16 Score=50.78 Aligned_cols=162 Identities=10% Similarity=-0.042 Sum_probs=112.7
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCCCCC----------------HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHh
Q 010790 31 QSCTKSKDLTTAISLYESAHSQNLRLS----------------LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS 94 (501)
Q Consensus 31 ~~~~k~g~~~~A~~lf~~m~~~gv~p~----------------~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~ 94 (501)
..+.+.|++++|++.|..+.+..-... ...+..|..+|...+ ++++|.+++..+..
T Consensus 12 ~~l~~~~~y~eA~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~al~~l~~~y~~~~--------~~~~a~~~~~~~~~ 83 (434)
T 4b4t_Q 12 RRLVNEKQYNEAEQVYLSLLDKDSSQSSAAAGASVDDKRRNEQETSILELGQLYVTMG--------AKDKLREFIPHSTE 83 (434)
T ss_dssp HHHHHHTCHHHHHHHHHHHHHSCCCSSSBSSSSSBCSHHHHHHHHHHHHHHHHHHHHT--------CHHHHHHHHHHTHH
T ss_pred HHHHHCCCHHHHHHHHHHHHhhCcccchhHHHHHHHHHHhhhHHHHHHHHHHHHHHCC--------CHHHHHHHHHHHHH
Confidence 456788999999999999886432211 123556667888877 89999999988765
Q ss_pred C-CCCCCH----HHHHHHHHHHHhCCCHHHHHHHHHHhHh---hcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 95 N-NVIPNE----ASVTSVARLAASKNDGDYAFVLIKRMNN---EFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 95 ~-g~~pd~----~t~~~li~~~~~~g~~~~A~~l~~~M~~---~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
. +..++. .+.+.+-..+...|+.+.|..++.+... ..+..+ ...++..+-..|...|++++|..++++...
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~ 163 (434)
T 4b4t_Q 84 YMMQFAKSKTVKVLKTLIEKFEQVPDSLDDQIFVCEKSIEFAKREKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLR 163 (434)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHCSCCSCHHHHHHHHHHHHHHHHHSSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHccchHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHH
Confidence 2 111222 1223333344457899999999887621 222222 246778889999999999999999988754
Q ss_pred C--CC--CC-CHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 166 M--GL--SL-EQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 166 ~--gv--~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
. +. .+ ....|..++..|...|+.++|..++++...
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 203 (434)
T 4b4t_Q 164 EFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAART 203 (434)
T ss_dssp HHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 2 11 12 245788999999999999999999987654
No 161
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=95.99 E-value=0.015 Score=47.29 Aligned_cols=87 Identities=16% Similarity=-0.108 Sum_probs=67.1
Q ss_pred hCCCHHHHHHHHHHhHhhcC--CCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHH
Q 010790 113 SKNDGDYAFVLIKRMNNEFN--VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190 (501)
Q Consensus 113 ~~g~~~~A~~l~~~M~~~~g--i~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~ 190 (501)
..|++++|...|++. ...+ -+-+...|..+-..|.+.|+.++|...|++.....-. +...+..+..++.+.|+.++
T Consensus 2 ~~g~~~~A~~~~~~a-l~~~~~~p~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p~-~~~~~~~l~~~~~~~g~~~~ 79 (117)
T 3k9i_A 2 VLGLEAQAVPYYEKA-IASGLQGKDLAECYLGLGSTFRTLGEYRKAEAVLANGVKQFPN-HQALRVFYAMVLYNLGRYEQ 79 (117)
T ss_dssp -----CCCHHHHHHH-HSSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHTCHHH
T ss_pred CCCcHHHHHHHHHHH-HHcCCCCccHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-chHHHHHHHHHHHHcCCHHH
Confidence 468899999999998 5543 1224467888888999999999999999998876422 57788889999999999999
Q ss_pred HHHHHHHHHhC
Q 010790 191 VYQYLQKLRST 201 (501)
Q Consensus 191 a~~ll~~M~~~ 201 (501)
|+..|.+....
T Consensus 80 A~~~~~~al~~ 90 (117)
T 3k9i_A 80 GVELLLKIIAE 90 (117)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99999987654
No 162
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=95.97 E-value=0.076 Score=43.51 Aligned_cols=93 Identities=12% Similarity=-0.014 Sum_probs=74.7
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
+-.+...+.+.|++++|...|++. ... .| +...|..+=.+|...|+.++|...|+......- -+...|..|-..|
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~a-l~~--~P~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~P-~~~~~~~~la~~~ 95 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAV-CQK--EPEREEAWRSLGLTQAENEKDGLAIIALNHARMLDP-KDIAVHAALAVSH 95 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHH-HHH--STTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHH-HHH--CCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHH
Confidence 445667788899999999999998 332 24 566777777788899999999999998877532 2567888899999
Q ss_pred HhcCChHHHHHHHHHHHh
Q 010790 183 AETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~ 200 (501)
.+.|+.++|+..|++..+
T Consensus 96 ~~~g~~~~A~~~~~~al~ 113 (121)
T 1hxi_A 96 TNEHNANAALASLRAWLL 113 (121)
T ss_dssp HHHHHHHHHHHHHHHHHC
T ss_pred HHcCCHHHHHHHHHHHHH
Confidence 999999999999988764
No 163
>4f3v_A ESX-1 secretion system protein ECCA1; tetratricopeptide repeat, TPR domain, ATPase, protein secret protein transport; 2.00A {Mycobacterium tuberculosis}
Probab=95.93 E-value=0.091 Score=50.43 Aligned_cols=120 Identities=7% Similarity=-0.118 Sum_probs=90.5
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC--hhhHHHHHHHHHHcCCHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR--LRTYDPALFCFCENLEAEKAYE 158 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~--~~ty~~lI~~~~~~g~~~~A~~ 158 (501)
++++|.++|+.+...+ |+....-.+-..+.+.+++++|+..|+.. .... .|. ...+..+=.++...|+.++|..
T Consensus 117 ~y~eA~~~l~~~~~~~--p~~~~~~~~a~l~~~~~r~~dA~~~l~~a-~~~~-d~~~~~~a~~~LG~al~~LG~~~eAl~ 192 (282)
T 4f3v_A 117 NYADAMEALEAAPVAG--SEHLVAWMKAVVYGAAERWTDVIDQVKSA-GKWP-DKFLAGAAGVAHGVAAANLALFTEAER 192 (282)
T ss_dssp CHHHHHHHHTSSCCTT--CHHHHHHHHHHHHHHTTCHHHHHHHHTTG-GGCS-CHHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred CHHHHHHHHHHHHhcC--CchHHHHHHHHHHHHcCCHHHHHHHHHHh-hccC-CcccHHHHHHHHHHHHHHCCCHHHHHH
Confidence 8999999999886643 55445566666899999999999999877 4431 111 1245555667889999999999
Q ss_pred HHHHHHHCCCCCC--HHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCC
Q 010790 159 VEEHMGLMGLSLE--QQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVN 206 (501)
Q Consensus 159 lf~~M~~~gv~pd--~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~ 206 (501)
.|++.......|. ...+..+-.++.+.|+.++|..+|+++... .|+
T Consensus 193 ~l~~a~~g~~~P~~~~da~~~~glaL~~lGr~deA~~~l~~a~a~--~P~ 240 (282)
T 4f3v_A 193 RLTEANDSPAGEACARAIAWYLAMARRSQGNESAAVALLEWLQTT--HPE 240 (282)
T ss_dssp HHHHHHTSTTTTTTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH--SCC
T ss_pred HHHHHhcCCCCccccHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc--CCc
Confidence 9999875544354 235666677788899999999999999886 565
No 164
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=95.93 E-value=0.48 Score=48.37 Aligned_cols=161 Identities=11% Similarity=0.015 Sum_probs=105.8
Q ss_pred HHHHHHHHHHhcC---CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 25 NFLINLQSCTKSK---DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 25 ~~n~lI~~~~k~g---~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
.+..|-..|.+.| +.++|+..|....+.|- ++...+..|-..|.... ....+.++|++.|+... .| +.
T Consensus 178 a~~~Lg~~~~~~g~~~~~~~A~~~~~~aa~~g~-~~a~~~~~Lg~~y~~g~----~~~~d~~~A~~~~~~aa-~g---~~ 248 (452)
T 3e4b_A 178 CYVELATVYQKKQQPEQQAELLKQMEAGVSRGT-VTAQRVDSVARVLGDAT----LGTPDEKTAQALLEKIA-PG---YP 248 (452)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTC-SCHHHHHHHHHHHTCGG----GSSCCHHHHHHHHHHHG-GG---ST
T ss_pred HHHHHHHHHHHcCCcccHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHhCCC----CCCCCHHHHHHHHHHHc-CC---CH
Confidence 5566666777788 88888888888888775 33333333433443331 11126888888888875 32 34
Q ss_pred HHHHHHHHH-H--HhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcC-----CHHHHHHHHHHHHHCCCCCCHH
Q 010790 102 ASVTSVARL-A--ASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL-----EAEKAYEVEEHMGLMGLSLEQQ 173 (501)
Q Consensus 102 ~t~~~li~~-~--~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g-----~~~~A~~lf~~M~~~gv~pd~~ 173 (501)
..+..|-.. | ...++.++|+..|.+. .+.| +...+..|=..|. .| +.++|...|+... . -+..
T Consensus 249 ~a~~~Lg~~~~~~~~~~d~~~A~~~~~~A-a~~g---~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~Aa-~---g~~~ 319 (452)
T 3e4b_A 249 ASWVSLAQLLYDFPELGDVEQMMKYLDNG-RAAD---QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKAV-G---REVA 319 (452)
T ss_dssp HHHHHHHHHHHHSGGGCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTTT-T---TCHH
T ss_pred HHHHHHHHHHHhCCCCCCHHHHHHHHHHH-HHCC---CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHHh-C---CCHH
Confidence 455555555 3 4578889999999888 6655 4555665555665 55 8888988888766 3 3556
Q ss_pred HHHHHHHHHHh----cCChHHHHHHHHHHHhCCC
Q 010790 174 EIAALLKVSAE----TGRVEKVYQYLQKLRSTVR 203 (501)
Q Consensus 174 t~~~Li~~~~~----~g~~~~a~~ll~~M~~~~~ 203 (501)
.+..|-..|.. ..+.++|..+|++-.+.|.
T Consensus 320 A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 353 (452)
T 3e4b_A 320 ADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQ 353 (452)
T ss_dssp HHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhCh
Confidence 66666666665 3378888888888777654
No 165
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=95.92 E-value=0.085 Score=53.52 Aligned_cols=175 Identities=9% Similarity=-0.053 Sum_probs=101.2
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC-------CCC----CCChhhHHHHHHHHHHH
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA-------TDP----SSKDSALRHGFRVFDQM 92 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~-------~~~----~~k~~~~~~a~~lf~~M 92 (501)
..++.+-..|.+.|+.++|+..|.+..+..- -+...+..|-..+.... ... .......+.|...|+..
T Consensus 248 ~~~~~lg~~~~~~~~~~~A~~~~~~al~~~p-~~~~~~~~lg~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~a 326 (472)
T 4g1t_A 248 DVLRSAAKFYRRKDEPDKAIELLKKALEYIP-NNAYLHCQIGCCYRAKVFQVMNLRENGMYGKRKLLELIGHAVAHLKKA 326 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHHHHHHHHC------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHHHHHhCC-ChHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4677888899999999999999999876431 23444544432222110 000 00112456788888877
Q ss_pred HhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh--hHHHHH-HHHHHcCCHHHHHHHHHHHHHCCC-
Q 010790 93 LSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR--TYDPAL-FCFCENLEAEKAYEVEEHMGLMGL- 168 (501)
Q Consensus 93 ~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~--ty~~lI-~~~~~~g~~~~A~~lf~~M~~~gv- 168 (501)
.+... .+..++..+-..|...|+.++|...|++. ......|... .+..+- ..+...|+.++|...|.+.....-
T Consensus 327 ~~~~~-~~~~~~~~lg~~~~~~~~~~~A~~~~~ka-L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ai~~y~kal~i~~~ 404 (472)
T 4g1t_A 327 DEAND-NLFRVCSILASLHALADQYEEAEYYFQKE-FSKELTPVAKQLLHLRYGNFQLYQMKCEDKAIHHFIEGVKINQK 404 (472)
T ss_dssp HHHCT-TTCCCHHHHHHHHHHTTCHHHHHHHHHHH-HHSCCCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHSCCC
T ss_pred hhcCC-chhhhhhhHHHHHHHhccHHHHHHHHHHH-HhcCCCChHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhcCcc
Confidence 65422 23456788899999999999999999988 5443322211 122211 123467899999998887654311
Q ss_pred ----------------------CCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 169 ----------------------SLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 169 ----------------------~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+.+..+|+.|-..|...|+.++|++.|++-.+.
T Consensus 405 ~~~~~~~~~~l~~~~~~~l~~~p~~~~~~~~LG~~~~~~g~~~~A~~~y~kALe~ 459 (472)
T 4g1t_A 405 SREKEKMKDKLQKIAKMRLSKNGADSEALHVLAFLQELNEKMQQADEDSERGLES 459 (472)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHCC-CTTHHHHHHHHHHHHHHCC------------
T ss_pred cHHHHHHHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 123456777777777777777777777765543
No 166
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=95.90 E-value=0.2 Score=50.06 Aligned_cols=169 Identities=10% Similarity=-0.001 Sum_probs=116.1
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC-CCCCCHHH---HHHHHHHHH-hCCCCCCCChhhHHHHHHHHHHHHh----
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ-NLRLSLHH---FNALLYLCS-DSATDPSSKDSALRHGFRVFDQMLS---- 94 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~-gv~p~~~t---y~~LL~~c~-~~~~~~~~k~~~~~~a~~lf~~M~~---- 94 (501)
..+..+...|.+.|++++|.++|..+... +-.++..+ ...++..+. ..+ ..+.|..++.....
T Consensus 56 ~al~~l~~~y~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--------~~~~a~~~~~~~~~~~~~ 127 (434)
T 4b4t_Q 56 TSILELGQLYVTMGAKDKLREFIPHSTEYMMQFAKSKTVKVLKTLIEKFEQVPD--------SLDDQIFVCEKSIEFAKR 127 (434)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHHHTHHHHHTSCHHHHHHHHHHHHHHHCSCCS--------CHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHhCCC--------CHHHHHHHHHHHHHHHHH
Confidence 35788999999999999999999986642 11122222 222233222 223 68888888887654
Q ss_pred CCCCCC-HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc-CC--CC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC--C
Q 010790 95 NNVIPN-EASVTSVARLAASKNDGDYAFVLIKRMNNEF-NV--VP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLM--G 167 (501)
Q Consensus 95 ~g~~pd-~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~-gi--~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~--g 167 (501)
.+..+. ..++..+...|...|++++|..++.+..... +. .| ...+|..++..|...|++++|..+++..... .
T Consensus 128 ~~~~~~~~~~~~~la~~~~~~g~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~A~~~~~~al~~~~~ 207 (434)
T 4b4t_Q 128 EKRVFLKHSLSIKLATLHYQKKQYKDSLALINDLLREFKKLDDKPSLVDVHLLESKVYHKLRNLAKSKASLTAARTAANS 207 (434)
T ss_dssp SSCCSSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSSCSTHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHccChHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHhhc
Confidence 344443 4577889999999999999999998873221 11 11 2367888999999999999999999876532 1
Q ss_pred CC-C-C--HHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 168 LS-L-E--QQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 168 v~-p-d--~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
+. | . ...+..+...+...|++++|...|.+...
T Consensus 208 ~~~~~~~~~~~~~~~g~~~~~~~~y~~A~~~~~~a~~ 244 (434)
T 4b4t_Q 208 IYCPTQTVAELDLMSGILHCEDKDYKTAFSYFFESFE 244 (434)
T ss_dssp SCCCHHHHHHHHHHHHHHTTSSSCHHHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 21 1 1 24566666777788999999888876643
No 167
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.85 E-value=0.037 Score=57.44 Aligned_cols=118 Identities=13% Similarity=0.026 Sum_probs=85.1
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010790 31 QSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARL 110 (501)
Q Consensus 31 ~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~ 110 (501)
..|.+.|++++|++.|++..+.. +-+...|..+-..+...+ ++++|.+.|++..+.. +-+..+|..+-.+
T Consensus 14 ~~~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~l~-p~~~~~~~~lg~~ 83 (477)
T 1wao_1 14 NDYFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTE--------CYGYALGDATRAIELD-KKYIKGYYRRAAS 83 (477)
T ss_dssp SSTTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHSC-TTCHHHHHHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHhC-CCCHHHHHHHHHH
Confidence 34567899999999999987652 224667777777777777 8999999999988753 2367788899999
Q ss_pred HHhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHH--HHHcCCHHHHHHHHH
Q 010790 111 AASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFC--FCENLEAEKAYEVEE 161 (501)
Q Consensus 111 ~~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~--~~~~g~~~~A~~lf~ 161 (501)
|.+.|++++|.+.|++. .+. .|+ ...+..+-.+ +.+.|+.++|.++++
T Consensus 84 ~~~~g~~~eA~~~~~~a-l~~--~p~~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 84 NMALGKFRAALRDYETV-VKV--KPHDKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHTCHHHHHHHHHHH-HHH--STTCTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHcCCHHHHHHHHHHH-HHh--CCCCHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999988 432 233 2344444444 778899999999887
No 168
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=95.83 E-value=0.033 Score=57.78 Aligned_cols=117 Identities=10% Similarity=-0.017 Sum_probs=86.9
Q ss_pred CCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHH
Q 010790 76 SSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK 155 (501)
Q Consensus 76 ~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~ 155 (501)
+.+.|++++|.+.|++..+.. +-+..+|..+..+|.+.|++++|...+++. .+.. +-+..+|..+-.+|.+.|+.++
T Consensus 16 ~~~~g~~~~A~~~~~~Al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~l~-p~~~~~~~~lg~~~~~~g~~~e 92 (477)
T 1wao_1 16 YFKAKDYENAIKFYSQAIELN-PSNAIYYGNRSLAYLRTECYGYALGDATRA-IELD-KKYIKGYYRRAASNMALGKFRA 92 (477)
T ss_dssp TTTTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHSC-TTCHHHHHHHHHHHHHHTCHHH
T ss_pred HHHhCCHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHcCCHHH
Confidence 445668999999999987742 235889999999999999999999999998 4432 2356788888889999999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHH--HHhcCChHHHHHHHH
Q 010790 156 AYEVEEHMGLMGLSLEQQEIAALLKV--SAETGRVEKVYQYLQ 196 (501)
Q Consensus 156 A~~lf~~M~~~gv~pd~~t~~~Li~~--~~~~g~~~~a~~ll~ 196 (501)
|.+.|++..+..-. +...+..+-.+ +.+.|+.++|+++++
T Consensus 93 A~~~~~~al~~~p~-~~~~~~~l~~~~~~~~~g~~~~A~~~~~ 134 (477)
T 1wao_1 93 ALRDYETVVKVKPH-DKDAKMKYQECNKIVKQKAFERAIAGDE 134 (477)
T ss_dssp HHHHHHHHHHHSTT-CTTHHHHHHHHHHHHHHHHHCCC-----
T ss_pred HHHHHHHHHHhCCC-CHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999998765311 22345555444 778888999998887
No 169
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=95.79 E-value=0.7 Score=46.55 Aligned_cols=171 Identities=9% Similarity=-0.018 Sum_probs=113.6
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhC-----C-CCC-CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCC
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQ-----N-LRL-SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~-----g-v~p-~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g 96 (501)
.+|+.+-..|...|+.++|+..|++..+- + ..+ ...+++.+-.++...+ .+.+++|.+.|++..+.
T Consensus 95 ~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~~~~~~~~~~~~~~~~~g~~~~~~~------~~~y~~A~~~~~kal~~- 167 (472)
T 4g1t_A 95 VTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEKFSSPYRIESPELDCEEGWTRLKCG------GNQNERAKVCFEKALEK- 167 (472)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHSCCSSCCCCHHHHHHHHHHHHHHC------TTHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHhHhcccccchhhHHHHHHHHHHHHHHc------cccHHHHHHHHHHHHHh-
Confidence 47888889999999999999999987632 1 112 2344544332222211 01689999999998764
Q ss_pred CCCC-HHHHHHHHHH---HHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCC
Q 010790 97 VIPN-EASVTSVARL---AASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMG 167 (501)
Q Consensus 97 ~~pd-~~t~~~li~~---~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~g 167 (501)
.|+ ...+..+..+ +...++.++|++.+++. .+. .| +...+..+-..+.. .|+.+.|.+++++.....
T Consensus 168 -~p~~~~~~~~~~~~~~~l~~~~~~~~al~~~~~a-l~l--~p~~~~~~~~l~~~~~~~~~~~~~~~~a~~~~~~al~~~ 243 (472)
T 4g1t_A 168 -KPKNPEFTSGLAIASYRLDNWPPSQNAIDPLRQA-IRL--NPDNQYLKVLLALKLHKMREEGEEEGEGEKLVEEALEKA 243 (472)
T ss_dssp -STTCHHHHHHHHHHHHHHHHSCCCCCTHHHHHHH-HHH--CSSCHHHHHHHHHHHHHCC------CHHHHHHHHHHHHC
T ss_pred -CCCCHHHHHHHHHHHHHhcCchHHHHHHHHHHHH-hhc--CCcchHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHhC
Confidence 343 4444444444 44567888899998877 332 24 44555555445544 467788999998876653
Q ss_pred CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 168 LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 168 v~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
..+...+..+-..|...|+.++|...+.+..+. .|+..
T Consensus 244 -~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~--~p~~~ 281 (472)
T 4g1t_A 244 -PGVTDVLRSAAKFYRRKDEPDKAIELLKKALEY--IPNNA 281 (472)
T ss_dssp -SSCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--STTCH
T ss_pred -ccHHHHHHHHHHHHHHcCchHHHHHHHHHHHHh--CCChH
Confidence 336678999999999999999999999988764 45543
No 170
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=95.72 E-value=0.17 Score=48.16 Aligned_cols=97 Identities=12% Similarity=0.015 Sum_probs=62.7
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAAL 178 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~L 178 (501)
+...+..+...+...|++++|...|++. ... .| +...|..+-..|.+.|++++|...++...... .-+...|..+
T Consensus 3 ~a~~~~~~g~~~~~~g~~~~A~~~~~~a-l~~--~p~~~~~~~~la~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~l 78 (281)
T 2c2l_A 3 SAQELKEQGNRLFVGRKYPEAAACYGRA-ITR--NPLVAVYYTNRALCYLKMQQPEQALADCRRALELD-GQSVKAHFFL 78 (281)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHH--CSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC-TTCHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHh--CCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhC-CCCHHHHHHH
Confidence 3445666666777777777777777766 332 23 45666666667777777777777777665432 1245566677
Q ss_pred HHHHHhcCChHHHHHHHHHHHh
Q 010790 179 LKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 179 i~~~~~~g~~~~a~~ll~~M~~ 200 (501)
-.+|...|+.++|...|.+...
T Consensus 79 g~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 79 GQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 7777777777777777766543
No 171
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=95.68 E-value=0.4 Score=38.54 Aligned_cols=90 Identities=9% Similarity=-0.008 Sum_probs=45.4
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCC-CC-HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC--HHHHH
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLR-LS-LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN--EASVT 105 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~-p~-~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd--~~t~~ 105 (501)
-..+.+.|++++|+..|+.+.+..-. +. ...+..+-..+...+ ++++|...|+.......... ..++.
T Consensus 9 a~~~~~~~~~~~A~~~~~~~~~~~p~~~~~~~~~~~lg~~~~~~~--------~~~~A~~~~~~~~~~~p~~~~~~~~~~ 80 (129)
T 2xev_A 9 AFDALKNGKYDDASQLFLSFLELYPNGVYTPNALYWLGESYYATR--------NFQLAEAQFRDLVSRYPTHDKAAGGLL 80 (129)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHCSSSTTHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCTTSTTHHHHHH
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHCCCCcccHHHHHHHHHHHHHhc--------cHHHHHHHHHHHHHHCCCCcccHHHHH
Confidence 34455666677777766665543211 10 012222223444444 56666666666554321110 34455
Q ss_pred HHHHHHHhCCCHHHHHHHHHHh
Q 010790 106 SVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 106 ~li~~~~~~g~~~~A~~l~~~M 127 (501)
.+...+...|+.++|...|++.
T Consensus 81 ~la~~~~~~g~~~~A~~~~~~~ 102 (129)
T 2xev_A 81 KLGLSQYGEGKNTEAQQTLQQV 102 (129)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 5555666666666666666665
No 172
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=95.64 E-value=0.25 Score=44.42 Aligned_cols=134 Identities=11% Similarity=0.021 Sum_probs=91.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 010790 29 NLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVA 108 (501)
Q Consensus 29 lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li 108 (501)
+-..|.+.|++++|+..|++..+.. +-+...+..+-..+...+ +.++|...|++..+.. +-+..++..+-
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g--------~~~~A~~~~~~al~~~-P~~~~a~~~lg 129 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQKA-PNNVDCLEACAEMQVCRG--------QEKDALRMYEKILQLE-ADNLAANIFLG 129 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHcC-CCCHHHHHHHH
Confidence 7788999999999999999988653 224566777766777777 8999999999988753 23577888888
Q ss_pred HHHHhCCCH--HHHHHHHHHhHhhcCCCCChhh--HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q 010790 109 RLAASKNDG--DYAFVLIKRMNNEFNVVPRLRT--YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALL 179 (501)
Q Consensus 109 ~~~~~~g~~--~~A~~l~~~M~~~~gi~P~~~t--y~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li 179 (501)
..|...|+. ..+...+... . .|+... +..+=.++...|+.++|...|++... +.|+......|.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~a~~~~g~~~~~~~~~~~A~~~~~~al~--l~P~~~~~~~l~ 197 (208)
T 3urz_A 130 NYYYLTAEQEKKKLETDYKKL-S----SPTKMQYARYRDGLSKLFTTRYEKARNSLQKVIL--RFPSTEAQKTLD 197 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHC--------CCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTT--TSCCHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHH-h----CCCchhHHHHHHHHHHHHccCHHHHHHHHHHHHH--hCCCHHHHHHHH
Confidence 887666543 3445555444 2 244332 22233345567999999999999875 467765544443
No 173
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.42 E-value=0.19 Score=51.68 Aligned_cols=141 Identities=8% Similarity=-0.153 Sum_probs=78.3
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..|.+.|++++|+..|++..+..-.... .. -+...+ ...+ ...+|
T Consensus 270 ~~~~~G~~~~~~g~~~~A~~~y~~Al~~~p~~~~------------~~---------~~~~~~-~~~~-------~~~~~ 320 (457)
T 1kt0_A 270 IVKEKGTVYFKGGKYMQAVIQYGKIVSWLEMEYG------------LS---------EKESKA-SESF-------LLAAF 320 (457)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCS------------CC---------HHHHHH-HHHH-------HHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHhccccc------------CC---------hHHHHH-HHHH-------HHHHH
Confidence 5677778899999999999999987753211000 00 001111 1111 12355
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL-EQQEIAALLKVSA 183 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p-d~~t~~~Li~~~~ 183 (501)
..+-.+|.+.|++++|+..|++. .... +-+...|..+-.+|...|++++|...|+..... .| +...|..+-..+.
T Consensus 321 ~nla~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~~~a~~~l~~~~~ 396 (457)
T 1kt0_A 321 LNLAMCYLKLREYTKAVECCDKA-LGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQNKAARLQISMCQK 396 (457)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C----CHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHH-HhcC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHH
Confidence 66666666677777777666666 3321 124455666666666677777777766666543 22 3345555666666
Q ss_pred hcCChHHHH-HHHHHH
Q 010790 184 ETGRVEKVY-QYLQKL 198 (501)
Q Consensus 184 ~~g~~~~a~-~ll~~M 198 (501)
+.++.+++. .++..|
T Consensus 397 ~~~~~~~a~~~~~~~~ 412 (457)
T 1kt0_A 397 KAKEHNERDRRIYANM 412 (457)
T ss_dssp HHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHH
Confidence 666555443 334444
No 174
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=95.34 E-value=0.21 Score=41.15 Aligned_cols=104 Identities=8% Similarity=-0.050 Sum_probs=74.6
Q ss_pred HHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc--CCCCC--
Q 010790 61 FNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF--NVVPR-- 136 (501)
Q Consensus 61 y~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~--gi~P~-- 136 (501)
+.-|=..+.+.+ ++++|++.|++..+.. +-+..+|+.+-.+|...|++++|++.|++. .+. ...++
T Consensus 11 ~~~lG~~~~~~~--------~~~~A~~~y~~Al~~~-p~~~~~~~nlg~~~~~~~~~~~A~~~~~~a-l~~~~~~~~~~~ 80 (127)
T 4gcn_A 11 EKDLGNAAYKQK--------DFEKAHVHYDKAIELD-PSNITFYNNKAAVYFEEKKFAECVQFCEKA-VEVGRETRADYK 80 (127)
T ss_dssp HHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTCCHH
T ss_pred HHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-CCCHHHHHhHHHHHHHhhhHHHHHHHHHHH-HHhCcccchhhH
Confidence 344444555566 8999999999987743 236788999999999999999999999987 332 11111
Q ss_pred --hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHH
Q 010790 137 --LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA 176 (501)
Q Consensus 137 --~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~ 176 (501)
..+|..+=.+|...|++++|.+.|+..... .||.....
T Consensus 81 ~~a~~~~~lg~~~~~~~~~~~A~~~~~kal~~--~~~~~~~~ 120 (127)
T 4gcn_A 81 LIAKAMSRAGNAFQKQNDLSLAVQWFHRSLSE--FRDPELVK 120 (127)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCCHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh--CcCHHHHH
Confidence 135666666788899999999999887653 45554433
No 175
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=95.30 E-value=0.25 Score=51.30 Aligned_cols=121 Identities=10% Similarity=-0.045 Sum_probs=88.4
Q ss_pred hHHHHHHHHHHHHhC---CCC---C-CHHHHHHHHHHHHhCCCHHHHHHHHHHhHh--h--cC-CCCCh-hhHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSN---NVI---P-NEASVTSVARLAASKNDGDYAFVLIKRMNN--E--FN-VVPRL-RTYDPALFCF 147 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~---g~~---p-d~~t~~~li~~~~~~g~~~~A~~l~~~M~~--~--~g-i~P~~-~ty~~lI~~~ 147 (501)
++++|..++++..+. -+- | -..+++.|..+|...|++++|..++.+... + .| -.|++ .+++.|=..|
T Consensus 324 ~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 403 (490)
T 3n71_A 324 LYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQAYEEASHYARRMVDGYMKLYHHNNAQLGMAVMRAGLTN 403 (490)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 799999999887652 122 2 256799999999999999999999987621 1 12 12333 7889999999
Q ss_pred HHcCCHHHHHHHHHHHHH-----CCC-CCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 148 CENLEAEKAYEVEEHMGL-----MGL-SLEQQ-EIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 148 ~~~g~~~~A~~lf~~M~~-----~gv-~pd~~-t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
...|+.++|..+|++... .|- -|++. +.+.|-.++...+..++|..++.++++.
T Consensus 404 ~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~~ 464 (490)
T 3n71_A 404 WHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMREA 464 (490)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999987643 232 23333 4445556666788899999999999764
No 176
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=95.14 E-value=0.25 Score=50.76 Aligned_cols=68 Identities=13% Similarity=0.079 Sum_probs=55.8
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCH
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNE 207 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~ 207 (501)
...|..+-.+|.+.|++++|...|+...... ..+...|..+-.+|...|++++|+..|++..+. .|+.
T Consensus 317 ~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~~g~a~~~~g~~~~A~~~~~~al~l--~P~~ 384 (457)
T 1kt0_A 317 LAAFLNLAMCYLKLREYTKAVECCDKALGLD-SANEKGLYRRGEAQLLMNEFESAKGDFEKVLEV--NPQN 384 (457)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTT--C---
T ss_pred HHHHHHHHHHHHHhcCHHHHHHHHHHHHhcC-CccHHHHHHHHHHHHHccCHHHHHHHHHHHHHh--CCCC
Confidence 4678888889999999999999999988754 236788999999999999999999999998754 4543
No 177
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=95.05 E-value=1.1 Score=37.23 Aligned_cols=113 Identities=10% Similarity=0.001 Sum_probs=91.6
Q ss_pred hhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHH
Q 010790 79 DSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAE 154 (501)
Q Consensus 79 ~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~ 154 (501)
..+.++|++.|.+-.+.|. |+.. |-..|...+..++|++.|+.. -+.| +...+..|=..|.. .+|.+
T Consensus 8 ~~d~~~A~~~~~~aa~~g~-~~a~----lg~~y~~g~~~~~A~~~~~~A-a~~g---~~~a~~~Lg~~y~~G~g~~~d~~ 78 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE-MFGC----LSLVSNSQINKQKLFQYLSKA-CELN---SGNGCRFLGDFYENGKYVKKDLR 78 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC-TTHH----HHHHTCTTSCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHCSSSCCCHH
T ss_pred ccCHHHHHHHHHHHHcCCC-Hhhh----HHHHHHcCCCHHHHHHHHHHH-HcCC---CHHHHHHHHHHHHcCCCCCccHH
Confidence 4578999999999998883 3333 666677778889999999998 6654 56777777777877 78999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHHHHHHHh----cCChHHHHHHHHHHHhCCC
Q 010790 155 KAYEVEEHMGLMGLSLEQQEIAALLKVSAE----TGRVEKVYQYLQKLRSTVR 203 (501)
Q Consensus 155 ~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~~~ 203 (501)
+|.+.|+.-.+.| +...+..|-..|.. .++.++|..+|++-.+.|.
T Consensus 79 ~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 79 KAAQYYSKACGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp HHHHHHHHHHHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 9999999998875 56788888888888 8899999999999877753
No 178
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=94.96 E-value=0.75 Score=47.72 Aligned_cols=156 Identities=9% Similarity=0.002 Sum_probs=92.1
Q ss_pred HhHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC-------
Q 010790 23 ETNFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN------- 95 (501)
Q Consensus 23 ~~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~------- 95 (501)
+..|-..+..+.+.|++++|..+|++.... |.....-. .++... ..++ +++.+...
T Consensus 213 ~~lW~~ya~~~~~~~~~~~ar~i~erAi~~---P~~~~l~~---~y~~~~--------e~~~---~~~~l~~~~~~~~~~ 275 (493)
T 2uy1_A 213 EEVYFFYSEYLIGIGQKEKAKKVVERGIEM---SDGMFLSL---YYGLVM--------DEEA---VYGDLKRKYSMGEAE 275 (493)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH---CCSSHHHH---HHHHHT--------TCTH---HHHHHHHHTC-----
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHhC---CCcHHHHH---HHHhhc--------chhH---HHHHHHHHHHhhccc
Confidence 345666677778899999999999998877 44322111 222211 0001 11221110
Q ss_pred --CCCC---CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 010790 96 --NVIP---NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170 (501)
Q Consensus 96 --g~~p---d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p 170 (501)
+..+ ....|...++..-+.+..+.|..+|+.. +..+..+.+....+.|...+ .++.+.|..+|+.....- .-
T Consensus 276 ~~~~~~~~~~~~lw~~y~~~~~r~~~~~~AR~i~~~A-~~~~~~~~v~i~~A~lE~~~-~~d~~~ar~ife~al~~~-~~ 352 (493)
T 2uy1_A 276 SAEKVFSKELDLLRINHLNYVLKKRGLELFRKLFIEL-GNEGVGPHVFIYCAFIEYYA-TGSRATPYNIFSSGLLKH-PD 352 (493)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHH-TTSCCCHHHHHHHHHHHHHH-HCCSHHHHHHHHHHHHHC-TT
T ss_pred hhhhhcccccHHHHHHHHHHHHHcCCHHHHHHHHHHh-hCCCCChHHHHHHHHHHHHH-CCChHHHHHHHHHHHHHC-CC
Confidence 0111 2355777777777778899999999887 43322112222223333322 347889999998877642 11
Q ss_pred CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 171 EQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 171 d~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
+...|...++...+.|+.+.|..+|++.
T Consensus 353 ~~~~~~~yid~e~~~~~~~~aR~l~er~ 380 (493)
T 2uy1_A 353 STLLKEEFFLFLLRIGDEENARALFKRL 380 (493)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHS
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3445677777777888888888888886
No 179
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=94.94 E-value=0.31 Score=41.50 Aligned_cols=103 Identities=9% Similarity=0.005 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHhCCCHHHHHHHHHHhHhhc-------CC---------CC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 102 ASVTSVARLAASKNDGDYAFVLIKRMNNEF-------NV---------VP-RLRTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 102 ~t~~~li~~~~~~g~~~~A~~l~~~M~~~~-------gi---------~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
..+...-..+.+.|++++|...|.+. ... .- .| +...|..+-.+|.+.|++++|...++...
T Consensus 12 ~~~~~~G~~~~~~~~~~~A~~~y~~a-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~~~~~~~~~~A~~~~~~al 90 (162)
T 3rkv_A 12 EALRQKGNELFVQKDYKEAIDAYRDA-LTRLDTLILREKPGEPEWVELDRKNIPLYANMSQCYLNIGDLHEAEETSSEVL 90 (162)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHHHTSCTTSHHHHHHHHTHHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHH-HHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHH
Confidence 34566677788899999999999877 332 00 11 23677888888999999999999999887
Q ss_pred HCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 165 LMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 165 ~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
... ..+...|..+-.+|...|++++|...|.+.... .|+..
T Consensus 91 ~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l--~p~~~ 131 (162)
T 3rkv_A 91 KRE-ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN--HPAAA 131 (162)
T ss_dssp HHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CGGGH
T ss_pred hcC-CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc--CCCCH
Confidence 753 236778889999999999999999999887654 45543
No 180
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=94.79 E-value=0.81 Score=48.38 Aligned_cols=175 Identities=11% Similarity=0.077 Sum_probs=118.2
Q ss_pred hcCCHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHhCCCC--CCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 010790 35 KSKDLTTAISLYESAHSQNLRLS-LHHFNALLYLCSDSATD--PSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLA 111 (501)
Q Consensus 35 k~g~~~~A~~lf~~m~~~gv~p~-~~ty~~LL~~c~~~~~~--~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~ 111 (501)
+...-++|+++++++...+ |+ ...|+.-=..+...+.+ .......++++++.++.+.+... -+..+|+.---.+
T Consensus 41 ~~~~~eeal~~~~~~l~~n--P~~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~l~~~p-K~y~aW~hR~w~l 117 (567)
T 1dce_A 41 AGELDESVLELTSQILGAN--PDFATLWNCRREVLQHLETEKSPEESAALVKAELGFLESCLRVNP-KSYGTWHHRCWLL 117 (567)
T ss_dssp TTCCSHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHC--chhHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHHHHhCC-CCHHHHHHHHHHH
Confidence 3444578899999988754 33 23344322222222200 00000128899999999987543 3778898888888
Q ss_pred HhCC--CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcC-CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhc---
Q 010790 112 ASKN--DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL-EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAET--- 185 (501)
Q Consensus 112 ~~~g--~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g-~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~--- 185 (501)
.+.| ++++|++.++.+ -+... -+...|+.---.+.+.| ..+++.+.++.+.+.... |...|+-.-..+.+.
T Consensus 118 ~~l~~~~~~~el~~~~k~-l~~d~-~N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~~p~-n~saW~~r~~ll~~l~~~ 194 (567)
T 1dce_A 118 SRLPEPNWARELELCARF-LEADE-RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYSSWHYRSCLLPQLHPQ 194 (567)
T ss_dssp HTCSSCCHHHHHHHHHHH-HHHCT-TCHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTTTCC-CHHHHHHHHHHHHHHSCC
T ss_pred HHcccccHHHHHHHHHHH-Hhhcc-ccccHHHHHHHHHHHcCCChHHHHHHHHHHHHHCCC-CccHHHHHHHHHHhhccc
Confidence 8999 779999999999 55432 35677777666777788 899999999999877654 888999888877763
Q ss_pred -----------CChHHHHHHHHHHHhCCCCCCHHHHHHHHHHh
Q 010790 186 -----------GRVEKVYQYLQKLRSTVRCVNEETGKIIEDWF 217 (501)
Q Consensus 186 -----------g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f 217 (501)
+..+++++.+.+.... .|+....-.-..|.
T Consensus 195 ~~~~~~~~~~~~~~~eel~~~~~ai~~--~P~~~saW~y~~~l 235 (567)
T 1dce_A 195 PDSGPQGRLPENVLLKELELVQNAFFT--DPNDQSAWFYHRWL 235 (567)
T ss_dssp CCSSSCCSSCHHHHHHHHHHHHHHHHH--CSSCSHHHHHHHHH
T ss_pred ccccccccccHHHHHHHHHHHHHHHhh--CCCCccHHHHHHHH
Confidence 4468888888877653 46555544444444
No 181
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=94.79 E-value=0.27 Score=40.07 Aligned_cols=92 Identities=10% Similarity=0.031 Sum_probs=58.6
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHH
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVT 105 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~ 105 (501)
+-.+-..+.+.|++++|+..|++..+..- -+...|..|=.++...+ +.++|+..|++..+... -+...+.
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~~~P-~~~~a~~~lg~~~~~~g--------~~~~A~~~~~~al~l~P-~~~~~~~ 89 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQKEP-EREEAWRSLGLTQAENE--------KDGLAIIALNHARMLDP-KDIAVHA 89 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST-TCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHCT-TCHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhCC-CCHHHHH
Confidence 44455566777888888888877765321 23444444444555666 67777777777665322 2455666
Q ss_pred HHHHHHHhCCCHHHHHHHHHHh
Q 010790 106 SVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 106 ~li~~~~~~g~~~~A~~l~~~M 127 (501)
.+...|...|+.++|...|++.
T Consensus 90 ~la~~~~~~g~~~~A~~~~~~a 111 (121)
T 1hxi_A 90 ALAVSHTNEHNANAALASLRAW 111 (121)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHH
Confidence 7777777777777777777766
No 182
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=94.67 E-value=0.56 Score=44.42 Aligned_cols=96 Identities=9% Similarity=-0.087 Sum_probs=77.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-C
Q 010790 58 LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP-R 136 (501)
Q Consensus 58 ~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~ 136 (501)
...+..+-..+...+ ++++|...|++..... +-+...|..+-..|.+.|++++|...+++. .. +.| +
T Consensus 4 a~~~~~~g~~~~~~g--------~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~~~~~~A~~~~~~a-l~--~~p~~ 71 (281)
T 2c2l_A 4 AQELKEQGNRLFVGR--------KYPEAAACYGRAITRN-PLVAVYYTNRALCYLKMQQPEQALADCRRA-LE--LDGQS 71 (281)
T ss_dssp HHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHC-SCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-TT--SCTTC
T ss_pred HHHHHHHHHHHHHcC--------CHHHHHHHHHHHHHhC-CccHHHHHHHHHHHHHhcCHHHHHHHHHHH-HH--hCCCC
Confidence 345555555666666 8999999999987742 237888999999999999999999999998 43 334 5
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
...+..+-.+|...|+.++|...|+....
T Consensus 72 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 100 (281)
T 2c2l_A 72 VKAHFFLGQCQLEMESYDEAIANLQRAYS 100 (281)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 57888888899999999999999988754
No 183
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=94.66 E-value=0.18 Score=52.38 Aligned_cols=126 Identities=8% Similarity=-0.081 Sum_probs=91.0
Q ss_pred HHHhcCCHHHHHHHHHHHHhC--C-CCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHh-----CCCC-
Q 010790 32 SCTKSKDLTTAISLYESAHSQ--N-LRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS-----NNVI- 98 (501)
Q Consensus 32 ~~~k~g~~~~A~~lf~~m~~~--g-v~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~-----~g~~- 98 (501)
.+-..|++++|+.++.+..+. . +-|+ ..+++.|..+|...| ++++|..++++... .|..
T Consensus 318 ~~~~qg~~~eA~~l~~~aL~~~~~~lg~~Hp~~a~~~~nLa~~y~~~g--------~~~eA~~~~~~aL~i~~~~lG~~H 389 (490)
T 3n71_A 318 KARSEGLYHEVVKLCRECLEKQEPVFADTNLYVLRLLSIASEVLSYLQ--------AYEEASHYARRMVDGYMKLYHHNN 389 (490)
T ss_dssp HHHTTTCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHHHHHHSCTTC
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHhc--------CHHHHHHHHHHHHHHHHHHcCCCC
Confidence 456789999999999986632 2 2232 446777777888888 89999999988664 2322
Q ss_pred CC-HHHHHHHHHHHHhCCCHHHHHHHHHHhHh--hcCCCCC---h-hhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 99 PN-EASVTSVARLAASKNDGDYAFVLIKRMNN--EFNVVPR---L-RTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 99 pd-~~t~~~li~~~~~~g~~~~A~~l~~~M~~--~~gi~P~---~-~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
|+ ..+++.|-..|...|++++|+.++.+... +.-+-|+ + .+.+.+-.++...+..+.|..+|..+.+
T Consensus 390 p~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~lG~~Hp~~~~~~~~l~~~~~e~~~~~~ae~~~~~~~~ 463 (490)
T 3n71_A 390 AQLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTHGPSHPITKDLEAMRMQTEMELRMFRQNEFMYHKMRE 463 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHTCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33 45789999999999999999999987521 1112233 3 3445555677788889999999999865
No 184
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=94.63 E-value=0.039 Score=43.40 Aligned_cols=65 Identities=6% Similarity=-0.141 Sum_probs=49.8
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
+...+..+-..+...|++++|...|++. .... +.+...|..+-.+|.+.|+.++|...|+.....
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~a-l~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 67 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQL-ITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQGLRY 67 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTS
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHH-HhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 4556777888888899999999999887 3321 235677777778888899999999988888764
No 185
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=94.54 E-value=1.3 Score=36.79 Aligned_cols=113 Identities=16% Similarity=0.069 Sum_probs=88.4
Q ss_pred cCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHh--
Q 010790 36 SKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAAS-- 113 (501)
Q Consensus 36 ~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~-- 113 (501)
.+|.++|+..|.+..+.|. |... |=..+.... ..++|++.|..-.+.| +...+..|-..|..
T Consensus 8 ~~d~~~A~~~~~~aa~~g~-~~a~----lg~~y~~g~--------~~~~A~~~~~~Aa~~g---~~~a~~~Lg~~y~~G~ 71 (138)
T 1klx_A 8 KKDLKKAIQYYVKACELNE-MFGC----LSLVSNSQI--------NKQKLFQYLSKACELN---SGNGCRFLGDFYENGK 71 (138)
T ss_dssp HHHHHHHHHHHHHHHHTTC-TTHH----HHHHTCTTS--------CHHHHHHHHHHHHHTT---CHHHHHHHHHHHHHCS
T ss_pred ccCHHHHHHHHHHHHcCCC-Hhhh----HHHHHHcCC--------CHHHHHHHHHHHHcCC---CHHHHHHHHHHHHcCC
Confidence 3578999999999999884 3333 323444444 5778999999988875 56778888888888
Q ss_pred --CCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCC
Q 010790 114 --KNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGL 168 (501)
Q Consensus 114 --~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv 168 (501)
.++.++|++.|+.. -+.| +...+..|=..|.. .++.++|.+.|+.-.+.|.
T Consensus 72 g~~~d~~~A~~~~~~A-a~~g---~~~a~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~ 128 (138)
T 1klx_A 72 YVKKDLRKAAQYYSKA-CGLN---DQDGCLILGYKQYAGKGVVKNEKQAVKTFEKACRLGS 128 (138)
T ss_dssp SSCCCHHHHHHHHHHH-HHTT---CHHHHHHHHHHHHHTSSSCCCHHHHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHHH-HcCC---CHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHHCCC
Confidence 89999999999998 6654 56677777778887 7899999999999887764
No 186
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=94.40 E-value=0.4 Score=47.75 Aligned_cols=136 Identities=14% Similarity=-0.009 Sum_probs=80.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.|..+-..|.+.|++++|+..|++..+.- ..+.... ..+++..+-. -+..+|
T Consensus 225 ~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~------------~~~~~~~--------~~~~~~~~~~--------~~~~~~ 276 (370)
T 1ihg_A 225 DLKNIGNTFFKSQNWEMAIKKYTKVLRYV------------EGSRAAA--------EDADGAKLQP--------VALSCV 276 (370)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH------------HHHHHHS--------CHHHHGGGHH--------HHHHHH
T ss_pred HHHHHHHHHHHhcCHHHHHHHHHHHHHHh------------hcCcccc--------ChHHHHHHHH--------HHHHHH
Confidence 46777788999999999999999876420 0000000 1111111110 134466
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC-ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVP-RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P-~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
..+..+|.+.|++++|...+++. .+. .| +...|..+-.+|.+.|+.++|...|++.....- -+...+..|-..+.
T Consensus 277 ~nla~~~~~~g~~~~A~~~~~~a-l~~--~p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l~P-~~~~~~~~l~~~~~ 352 (370)
T 1ihg_A 277 LNIGACKLKMSDWQGAVDSCLEA-LEI--DPSNTKALYRRAQGWQGLKEYDQALADLKKAQEIAP-EDKAIQAELLKVKQ 352 (370)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHH-HTT--CTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCHHHHHHHHHHH-HHh--CchhHHHHHHHHHHHHHccCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 66777777777777777777776 332 23 445666666677777777777777777655421 14555666666666
Q ss_pred hcCChHHHH
Q 010790 184 ETGRVEKVY 192 (501)
Q Consensus 184 ~~g~~~~a~ 192 (501)
+.++.+++.
T Consensus 353 ~~~~~~~a~ 361 (370)
T 1ihg_A 353 KIKAQKDKE 361 (370)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 655555543
No 187
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.32 E-value=0.42 Score=52.14 Aligned_cols=96 Identities=8% Similarity=0.054 Sum_probs=63.0
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
++++|+++...+ .+...|..|...+.+.|+++.|.+.|..+ +. |..+...|...|+.+...++-
T Consensus 667 ~~~~A~~~~~~~------~~~~~W~~la~~al~~~~~~~A~~~y~~~-~d---------~~~l~~l~~~~~~~~~~~~~~ 730 (814)
T 3mkq_A 667 QLTLARDLLTDE------SAEMKWRALGDASLQRFNFKLAIEAFTNA-HD---------LESLFLLHSSFNNKEGLVTLA 730 (814)
T ss_dssp CHHHHHHHHTTC------CCHHHHHHHHHHHHHTTCHHHHHHHHHHH-TC---------HHHHHHHHHHTTCHHHHHHHH
T ss_pred CHHHHHHHHHhh------CcHhHHHHHHHHHHHcCCHHHHHHHHHHc-cC---------hhhhHHHHHHcCCHHHHHHHH
Confidence 577777765443 46778888888888888888888888887 33 345555555666666655555
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 161 EHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 161 ~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
+.....|. ++.-..+|.+.|++++|.+++.++
T Consensus 731 ~~a~~~~~------~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 731 KDAETTGK------FNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp HHHHHTTC------HHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred HHHHHcCc------hHHHHHHHHHcCCHHHHHHHHHHc
Confidence 44444432 344444566677777777777665
No 188
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=94.30 E-value=0.52 Score=35.06 Aligned_cols=80 Identities=9% Similarity=0.006 Sum_probs=52.0
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
...+..+-..+...|++++|...|++. .... +.+...+..+-..|.+.|+.++|...|++..... .-+...+..+-.
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a-~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~~-p~~~~~~~~l~~ 85 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKA-LELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAKQNLGN 85 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHH-HhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcC-CCCHHHHHHHHH
Confidence 445666777778888888888888877 3321 1245667777777788888888888887776542 113445555444
Q ss_pred HHH
Q 010790 181 VSA 183 (501)
Q Consensus 181 ~~~ 183 (501)
.+.
T Consensus 86 ~~~ 88 (91)
T 1na3_A 86 AKQ 88 (91)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 189
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=94.16 E-value=0.52 Score=46.88 Aligned_cols=65 Identities=8% Similarity=-0.085 Sum_probs=55.8
Q ss_pred ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 136 ~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
+...|..+-.+|.+.|+.++|.+.+++..... .-+...|..+-.+|...|+.++|+..|++..+.
T Consensus 272 ~~~~~~nla~~~~~~g~~~~A~~~~~~al~~~-p~~~~a~~~lg~~~~~~g~~~eA~~~l~~Al~l 336 (370)
T 1ihg_A 272 ALSCVLNIGACKLKMSDWQGAVDSCLEALEID-PSNTKALYRRAQGWQGLKEYDQALADLKKAQEI 336 (370)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCHHHHHHHHHHHHHhC-chhHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 45688888889999999999999999998753 226778999999999999999999999988765
No 190
>3e4b_A ALGK; tetratricopeptide repeat, superhelix, alginate biosynt pseudomonas, protein binding; 2.50A {Pseudomonas fluorescens}
Probab=94.08 E-value=2.1 Score=43.47 Aligned_cols=153 Identities=11% Similarity=0.022 Sum_probs=109.3
Q ss_pred HHHHHHHHhc----CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHH-H--HhCCCCCCCChhhHHHHHHHHHHHHhCCCCC
Q 010790 27 LINLQSCTKS----KDLTTAISLYESAHSQNLRLSLHHFNALLYL-C--SDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99 (501)
Q Consensus 27 n~lI~~~~k~----g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~-c--~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p 99 (501)
..+-..|... ++.++|+..|+... .|. ...+..|=.. + ...+ +.++|++.|.+-.+.|
T Consensus 217 ~~Lg~~y~~g~~~~~d~~~A~~~~~~aa-~g~---~~a~~~Lg~~~~~~~~~~--------d~~~A~~~~~~Aa~~g--- 281 (452)
T 3e4b_A 217 DSVARVLGDATLGTPDEKTAQALLEKIA-PGY---PASWVSLAQLLYDFPELG--------DVEQMMKYLDNGRAAD--- 281 (452)
T ss_dssp HHHHHHHTCGGGSSCCHHHHHHHHHHHG-GGS---THHHHHHHHHHHHSGGGC--------CHHHHHHHHHHHHHTT---
T ss_pred HHHHHHHhCCCCCCCCHHHHHHHHHHHc-CCC---HHHHHHHHHHHHhCCCCC--------CHHHHHHHHHHHHHCC---
Confidence 4455555544 79999999999987 443 3444444333 2 2233 7999999999998877
Q ss_pred CHHHHHHHHHHHHhCC-----CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHH----cCCHHHHHHHHHHHHHCCCCC
Q 010790 100 NEASVTSVARLAASKN-----DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCE----NLEAEKAYEVEEHMGLMGLSL 170 (501)
Q Consensus 100 d~~t~~~li~~~~~~g-----~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~----~g~~~~A~~lf~~M~~~gv~p 170 (501)
+...+..|-..|. .| +.++|+..|... . . -+...+..|=..|.. ..+.++|...|+.-.+.|..
T Consensus 282 ~~~A~~~Lg~~y~-~G~g~~~d~~~A~~~~~~A-a-~---g~~~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~Aa~~g~~- 354 (452)
T 3e4b_A 282 QPRAELLLGKLYY-EGKWVPADAKAAEAHFEKA-V-G---REVAADYYLGQIYRRGYLGKVYPQKALDHLLTAARNGQN- 354 (452)
T ss_dssp CHHHHHHHHHHHH-HCSSSCCCHHHHHHHHHTT-T-T---TCHHHHHHHHHHHHTTTTSSCCHHHHHHHHHHHHTTTCT-
T ss_pred CHHHHHHHHHHHH-cCCCCCCCHHHHHHHHHHH-h-C---CCHHHHHHHHHHHHCCCCCCcCHHHHHHHHHHHHhhChH-
Confidence 6667777777777 55 999999999998 4 3 355666666666655 33999999999999887753
Q ss_pred CHHHHHHHHHHHHh----cCChHHHHHHHHHHHhCCC
Q 010790 171 EQQEIAALLKVSAE----TGRVEKVYQYLQKLRSTVR 203 (501)
Q Consensus 171 d~~t~~~Li~~~~~----~g~~~~a~~ll~~M~~~~~ 203 (501)
.....|-..|.. ..+.++|..+|..-.+.|.
T Consensus 355 --~A~~~Lg~~y~~G~g~~~d~~~A~~~~~~A~~~g~ 389 (452)
T 3e4b_A 355 --SADFAIAQLFSQGKGTKPDPLNAYVFSQLAKAQDT 389 (452)
T ss_dssp --THHHHHHHHHHSCTTBCCCHHHHHHHHHHHHTTCC
T ss_pred --HHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHCCC
Confidence 345556556654 4578999999988877764
No 191
>2uy1_A Cleavage stimulation factor 77; RNA-binding protein; 2.0A {Encephalitozoon cuniculi} PDB: 2uy1_B
Probab=93.90 E-value=0.53 Score=48.85 Aligned_cols=110 Identities=8% Similarity=0.025 Sum_probs=65.8
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC-CHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN-DGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYE 158 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g-~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~ 158 (501)
.++.|+.+|+.. .. ...+...|......-...+ +.+.|..+|+...+.. |+ ...|...++...+.|+.+.|+.
T Consensus 301 ~~~~AR~i~~~A-~~-~~~~~~v~i~~A~lE~~~~~d~~~ar~ife~al~~~---~~~~~~~~~yid~e~~~~~~~~aR~ 375 (493)
T 2uy1_A 301 GLELFRKLFIEL-GN-EGVGPHVFIYCAFIEYYATGSRATPYNIFSSGLLKH---PDSTLLKEEFFLFLLRIGDEENARA 375 (493)
T ss_dssp CHHHHHHHHHHH-TT-SCCCHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHC---TTCHHHHHHHHHHHHHHTCHHHHHH
T ss_pred CHHHHHHHHHHh-hC-CCCChHHHHHHHHHHHHHCCChHHHHHHHHHHHHHC---CCCHHHHHHHHHHHHHcCCHHHHHH
Confidence 477777777776 21 1123333332222222222 5778888887763332 32 2234555666667788888888
Q ss_pred HHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 159 VEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 159 lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
+|+... .....|...+.-=...|+.+.+..+++++..
T Consensus 376 l~er~~-----k~~~lw~~~~~fE~~~G~~~~~r~v~~~~~~ 412 (493)
T 2uy1_A 376 LFKRLE-----KTSRMWDSMIEYEFMVGSMELFRELVDQKMD 412 (493)
T ss_dssp HHHHSC-----CBHHHHHHHHHHHHHHSCHHHHHHHHHHHHH
T ss_pred HHHHHH-----HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 887762 2466777777766677888888887777664
No 192
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=93.79 E-value=1 Score=38.05 Aligned_cols=114 Identities=11% Similarity=-0.059 Sum_probs=62.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV 104 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~ 104 (501)
.+...=..+.+.|++++|+..|.+..+. +....... ++. ..+ ...+. +.+...|
T Consensus 13 ~~~~~G~~~~~~~~~~~A~~~y~~al~~------------~~~~~~~~-~~~----~~~-----~~~~~----~~~~~~~ 66 (162)
T 3rkv_A 13 ALRQKGNELFVQKDYKEAIDAYRDALTR------------LDTLILRE-KPG----EPE-----WVELD----RKNIPLY 66 (162)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH------------HHHHHHTS-CTT----SHH-----HHHHH----HTHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHH------------HHHhcccC-CCC----HHH-----HHHHH----HHHHHHH
Confidence 6677778899999999999999987643 00000000 000 000 01111 1133455
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
..+..+|.+.|++++|...++.. .... +.+...|..+-.+|...|++++|...|+.....
T Consensus 67 ~nla~~~~~~~~~~~A~~~~~~a-l~~~-p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l 126 (162)
T 3rkv_A 67 ANMSQCYLNIGDLHEAEETSSEV-LKRE-ETNEKALFRRAKARIAAWKLDEAEEDLKLLLRN 126 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHH-HHHS-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCcHHHHHHHHHHH-HhcC-CcchHHHHHHHHHHHHHhcHHHHHHHHHHHHhc
Confidence 55666666666666666666665 3221 123455555666666666666666666665543
No 193
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=93.63 E-value=3.4 Score=39.81 Aligned_cols=153 Identities=12% Similarity=0.038 Sum_probs=114.4
Q ss_pred CCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHH--HHHHHHHHHHhCCCCCCHHHHHHHHHHHHhC
Q 010790 37 KDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALR--HGFRVFDQMLSNNVIPNEASVTSVARLAASK 114 (501)
Q Consensus 37 g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~--~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~ 114 (501)
+++++++.+++.+.+..- -|-..|+---.+....+ ..+ ++++.++.|.+... -|-..|+---......
T Consensus 124 ~~~~~EL~~~~~~l~~~p-kny~aW~~R~~vl~~l~--------~~~~~~EL~~~~~~i~~d~-~N~sAW~~R~~ll~~l 193 (306)
T 3dra_A 124 FDPYREFDILEAMLSSDP-KNHHVWSYRKWLVDTFD--------LHNDAKELSFVDKVIDTDL-KNNSAWSHRFFLLFSK 193 (306)
T ss_dssp CCTHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTT--------CTTCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHSS
T ss_pred CCHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhc--------ccChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhc
Confidence 789999999999987542 35566666555555555 445 89999999988644 4888888877777787
Q ss_pred CC------HHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHH-HHHHHHHHHHCC--CCCCHHHHHHHHHHHHhc
Q 010790 115 ND------GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK-AYEVEEHMGLMG--LSLEQQEIAALLKVSAET 185 (501)
Q Consensus 115 g~------~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~-A~~lf~~M~~~g--v~pd~~t~~~Li~~~~~~ 185 (501)
+. ++++++.++++ ..... -|...|+.+-..+.+.|.... +..+.+.....+ -..+...+..|.+.|.+.
T Consensus 194 ~~~~~~~~~~eEl~~~~~a-I~~~p-~n~SaW~y~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~s~~al~~la~~~~~~ 271 (306)
T 3dra_A 194 KHLATDNTIDEELNYVKDK-IVKCP-QNPSTWNYLLGIHERFDRSITQLEEFSLQFVDLEKDQVTSSFALETLAKIYTQQ 271 (306)
T ss_dssp GGGCCHHHHHHHHHHHHHH-HHHCS-SCHHHHHHHHHHHHHTTCCGGGGHHHHHTTEEGGGTEESCHHHHHHHHHHHHHT
T ss_pred cccchhhhHHHHHHHHHHH-HHhCC-CCccHHHHHHHHHHhcCCChHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHcc
Confidence 77 89999999888 44433 477888888888888887444 445555554332 134778899999999999
Q ss_pred CChHHHHHHHHHHHhC
Q 010790 186 GRVEKVYQYLQKLRST 201 (501)
Q Consensus 186 g~~~~a~~ll~~M~~~ 201 (501)
|+.++|.++++.+.+.
T Consensus 272 ~~~~~A~~~~~~l~~~ 287 (306)
T 3dra_A 272 KKYNESRTVYDLLKSK 287 (306)
T ss_dssp TCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHhc
Confidence 9999999999999764
No 194
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=93.59 E-value=0.79 Score=36.26 Aligned_cols=78 Identities=12% Similarity=-0.038 Sum_probs=53.1
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 85 a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
|++.|++..+.. +-+...+..+...|...|++++|...|++. .... +.+...|..+-..|...|+.++|...|+...
T Consensus 4 a~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~al 80 (115)
T 2kat_A 4 ITERLEAMLAQG-TDNMLLRFTLGKTYAEHEQFDAALPHLRAA-LDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESGL 80 (115)
T ss_dssp HHHHHHHHHTTT-CCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCcHHHHHHHHHHHHHccCHHHHHHHHHHH-HHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 556666665532 235677777888888888888888888877 3321 1245567777777778888888888777665
Q ss_pred H
Q 010790 165 L 165 (501)
Q Consensus 165 ~ 165 (501)
.
T Consensus 81 ~ 81 (115)
T 2kat_A 81 A 81 (115)
T ss_dssp H
T ss_pred H
Confidence 4
No 195
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=93.56 E-value=0.49 Score=37.52 Aligned_cols=80 Identities=9% Similarity=-0.169 Sum_probs=63.2
Q ss_pred HHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 119 YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 119 ~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
.|...|++. ... -+.+...+..+-..|...|+.++|...|+...... ..+...|..+-..|.+.|+.++|...|++.
T Consensus 3 ~a~~~~~~a-l~~-~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~-p~~~~~~~~la~~~~~~g~~~~A~~~~~~a 79 (115)
T 2kat_A 3 AITERLEAM-LAQ-GTDNMLLRFTLGKTYAEHEQFDAALPHLRAALDFD-PTYSVAWKWLGKTLQGQGDRAGARQAWESG 79 (115)
T ss_dssp CHHHHHHHH-HTT-TCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHHTCHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHh-CCCcHHHHHHHHHHHHHccCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 466777776 332 12356788888889999999999999999987753 235678999999999999999999999987
Q ss_pred HhC
Q 010790 199 RST 201 (501)
Q Consensus 199 ~~~ 201 (501)
...
T Consensus 80 l~~ 82 (115)
T 2kat_A 80 LAA 82 (115)
T ss_dssp HHH
T ss_pred HHh
Confidence 653
No 196
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=93.45 E-value=0.16 Score=49.79 Aligned_cols=114 Identities=8% Similarity=-0.039 Sum_probs=62.8
Q ss_pred hHHHHHHHHHHHHhCCCCCCHH------------------HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEA------------------SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDP 142 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~------------------t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~ 142 (501)
++++|...|.+.... .|+.. .|..+..+|.+.|++++|...++.. .... +-+...|..
T Consensus 194 ~~~~A~~~y~~Al~~--~p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~a~~~ 269 (338)
T 2if4_A 194 KLEEAMQQYEMAIAY--MGDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLKRYDEAIGHCNIV-LTEE-EKNPKALFR 269 (338)
T ss_dssp CCHHHHHHHHHHHHH--SCHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTTCCHHHHHHHHHH-HHHC-TTCHHHHHH
T ss_pred CHHHHHHHHHHHHHH--hccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCCHHHHHH
Confidence 788899888886552 34433 7888888899999999999999888 4321 125678888
Q ss_pred HHHHHHHcCCHHHHHHHHHHHHHCCCCCC-HHHHHHHHHH-HHhcCChHHHHHHHHHHHh
Q 010790 143 ALFCFCENLEAEKAYEVEEHMGLMGLSLE-QQEIAALLKV-SAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 143 lI~~~~~~g~~~~A~~lf~~M~~~gv~pd-~~t~~~Li~~-~~~~g~~~~a~~ll~~M~~ 200 (501)
+-.+|...|++++|...|+..... .|+ ...+..|... ....+..+++..+|.+|..
T Consensus 270 lg~a~~~~g~~~~A~~~l~~al~l--~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l~ 327 (338)
T 2if4_A 270 RGKAKAELGQMDSARDDFRKAQKY--APDDKAIRRELRALAEQEKALYQKQKEMYKGIFK 327 (338)
T ss_dssp HHHHHHTTTCHHHHHHHHHHTTC-------------------------------------
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHH--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 888899999999999999887543 343 3344444433 2234566677777777653
No 197
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=93.42 E-value=0.25 Score=48.40 Aligned_cols=128 Identities=13% Similarity=-0.039 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHH------------------HHHHHHHHHHhCCCCCCCChhhHHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLH------------------HFNALLYLCSDSATDPSSKDSALRHGF 86 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~------------------ty~~LL~~c~~~~~~~~~k~~~~~~a~ 86 (501)
.+..+-..|.+.|++++|+..|.+..+.. |+.. .|..+-..+...+ ++++|+
T Consensus 181 ~~~~~g~~~~~~g~~~~A~~~y~~Al~~~--p~~~~~~~~~~~~~~~~~l~~~~~~nla~~~~~~g--------~~~~A~ 250 (338)
T 2if4_A 181 RRKMDGNSLFKEEKLEEAMQQYEMAIAYM--GDDFMFQLYGKYQDMALAVKNPCHLNIAACLIKLK--------RYDEAI 250 (338)
T ss_dssp HHHHHHHHTCSSSCCHHHHHHHHHHHHHS--CHHHHHTCCHHHHHHHHHHHTHHHHHHHHHHHTTT--------CCHHHH
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHh--ccchhhhhcccHHHHHHHHHHHHHHHHHHHHHHcC--------CHHHHH
Confidence 56667777889999999999999977542 3322 4444444566666 899999
Q ss_pred HHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh-hHHHHHHH-HHHcCCHHHHHHHHHHHH
Q 010790 87 RVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR-TYDPALFC-FCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 87 ~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~-ty~~lI~~-~~~~g~~~~A~~lf~~M~ 164 (501)
..|+...+.. +-+...|..+-.+|...|++++|...|++. . .+.|+.. .+..+-.. ....+..+.+..+|..|.
T Consensus 251 ~~~~~al~~~-p~~~~a~~~lg~a~~~~g~~~~A~~~l~~a-l--~l~p~~~~a~~~L~~l~~~~~~~~~~a~~~~~~~l 326 (338)
T 2if4_A 251 GHCNIVLTEE-EKNPKALFRRGKAKAELGQMDSARDDFRKA-Q--KYAPDDKAIRRELRALAEQEKALYQKQKEMYKGIF 326 (338)
T ss_dssp HHHHHHHHHC-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHT-T--C----------------------------------
T ss_pred HHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHH-H--HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999987743 246889999999999999999999999998 3 3445543 33333333 234566777888888876
Q ss_pred HC
Q 010790 165 LM 166 (501)
Q Consensus 165 ~~ 166 (501)
..
T Consensus 327 ~~ 328 (338)
T 2if4_A 327 KG 328 (338)
T ss_dssp --
T ss_pred CC
Confidence 43
No 198
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=92.25 E-value=0.72 Score=35.85 Aligned_cols=62 Identities=11% Similarity=0.057 Sum_probs=33.0
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M 163 (501)
+...+..+-..|...|++++|...|++. .+.. +-+...|..+-.+|.+.|+.++|.+.|+..
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~~~-p~~~~a~~~lg~~~~~~g~~~~A~~~~~~a 67 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEEL-VETD-PDYVGTYYHLGKLYERLDRTDDAIDTYAQG 67 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHS-TTCTHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHH-HHhC-CCcHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 3445555566666666666666666655 2221 112344555555555666666666555544
No 199
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=91.97 E-value=0.92 Score=35.21 Aligned_cols=81 Identities=10% Similarity=-0.109 Sum_probs=60.8
Q ss_pred ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC-CCCCHHHHHHHH
Q 010790 136 RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV-RCVNEETGKIIE 214 (501)
Q Consensus 136 ~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~-~~p~~~t~~~i~ 214 (501)
+...+..+-..|.+.|+.++|...|+......-. +...|..|-.+|.+.|+.++|.+.|++..... ..++.....-+.
T Consensus 6 ~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~~p~-~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l~~~~~~~~~~~~l~ 84 (100)
T 3ma5_A 6 DPFTRYALAQEHLKHDNASRALALFEELVETDPD-YVGTYYHLGKLYERLDRTDDAIDTYAQGIEVAREEGTQKDLSELQ 84 (100)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTT-CTHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhCCC-cHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhhhcCCchhHHHHHH
Confidence 4567778888899999999999999998876422 45689999999999999999999998876542 234444444444
Q ss_pred HHh
Q 010790 215 DWF 217 (501)
Q Consensus 215 ~~f 217 (501)
..+
T Consensus 85 ~~l 87 (100)
T 3ma5_A 85 DAK 87 (100)
T ss_dssp HHH
T ss_pred HHH
Confidence 333
No 200
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=91.92 E-value=1.3 Score=38.46 Aligned_cols=94 Identities=12% Similarity=-0.033 Sum_probs=72.3
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC--------hh-----hHHHHHHHHHHcCCHHHHHHHHHHHHHC----
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR--------LR-----TYDPALFCFCENLEAEKAYEVEEHMGLM---- 166 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~--------~~-----ty~~lI~~~~~~g~~~~A~~lf~~M~~~---- 166 (501)
+...-..+.+.|++++|...|+.. ... .|+ .. .|+.+=.++.+.|++++|...|+...+.
T Consensus 14 ~~~~G~~l~~~g~~eeAi~~Y~kA-L~l--~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~ 90 (159)
T 2hr2_A 14 ALSDAQRQLVAGEYDEAAANCRRA-MEI--SHTMPPEEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRR 90 (159)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHH-HHH--HTTSCTTSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHH-Hhh--CCCCcchhhhhhccchHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcc
Confidence 444556677889999999999877 332 244 22 7888888899999999999999887763
Q ss_pred -CCCCCH-HHH----HHHHHHHHhcCChHHHHHHHHHHHh
Q 010790 167 -GLSLEQ-QEI----AALLKVSAETGRVEKVYQYLQKLRS 200 (501)
Q Consensus 167 -gv~pd~-~t~----~~Li~~~~~~g~~~~a~~ll~~M~~ 200 (501)
.+.|+. ..| ..+-.++...|+.++|+..|++-.+
T Consensus 91 ~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAle 130 (159)
T 2hr2_A 91 GELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKVVE 130 (159)
T ss_dssp CCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred ccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHh
Confidence 235654 467 7888889999999999999988644
No 201
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=91.45 E-value=0.66 Score=35.96 Aligned_cols=68 Identities=9% Similarity=0.030 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh
Q 010790 58 LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137 (501)
Q Consensus 58 ~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~ 137 (501)
...|..+-..+...+ ++++|.+.|++..+.. +.+...+..+-.+|...|++++|...|++. .. +.|+.
T Consensus 4 ~~~~~~~g~~~~~~~--------~~~~A~~~~~~al~~~-p~~~~~~~~lg~~~~~~g~~~~A~~~~~~a-l~--~~p~~ 71 (111)
T 2l6j_A 4 FEKQKEQGNSLFKQG--------LYREAVHCYDQLITAQ-PQNPVGYSNKAMALIKLGEYTQAIQMCQQG-LR--YTSTA 71 (111)
T ss_dssp HHHHHHHHHHHHTTT--------CHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HT--SCSST
T ss_pred HHHHHHHHHHHHHcC--------CHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHhcCHHHHHHHHHHH-HH--hCCCc
Confidence 344555555666666 8999999999987753 236788999999999999999999999998 43 34664
No 202
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=91.34 E-value=1.4 Score=44.90 Aligned_cols=92 Identities=9% Similarity=-0.078 Sum_probs=71.3
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHhhc---CCCCC----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC-----C-CCCC-H
Q 010790 107 VARLAASKNDGDYAFVLIKRMNNEF---NVVPR----LRTYDPALFCFCENLEAEKAYEVEEHMGLM-----G-LSLE-Q 172 (501)
Q Consensus 107 li~~~~~~g~~~~A~~l~~~M~~~~---gi~P~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~-----g-v~pd-~ 172 (501)
.+.-+...|++++|+.++++. ... -+.|+ ..+++.|...|...|++++|..++++...- | --|+ .
T Consensus 293 ~ie~~~~~g~~~~a~~~~~~~-L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a 371 (429)
T 3qwp_A 293 KIEELKAHWKWEQVLAMCQAI-ISSNSERLPDINIYQLKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFFPGSHPVRG 371 (429)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HTCSSCCCCTTSHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHSCSSCHHHH
T ss_pred HHHHHHhhccHHHHHHHHHHH-HHhccCcCCccchHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHcCCCChHHH
Confidence 355566789999999999887 432 23333 378899999999999999999999987532 2 1232 3
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010790 173 QEIAALLKVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 173 ~t~~~Li~~~~~~g~~~~a~~ll~~M~ 199 (501)
.+++.|-..|...|+.++|..++.+..
T Consensus 372 ~~l~nLa~~~~~~g~~~eA~~~~~~Al 398 (429)
T 3qwp_A 372 VQVMKVGKLQLHQGMFPQAMKNLRLAF 398 (429)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHH
Confidence 579999999999999999999998753
No 203
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=91.22 E-value=0.82 Score=46.63 Aligned_cols=87 Identities=10% Similarity=-0.097 Sum_probs=67.3
Q ss_pred hCCCHHHHHHHHHHhHh--hcCCCCC----hhhHHHHHHHHHHcCCHHHHHHHHHHHHHC-----C-CCCC-HHHHHHHH
Q 010790 113 SKNDGDYAFVLIKRMNN--EFNVVPR----LRTYDPALFCFCENLEAEKAYEVEEHMGLM-----G-LSLE-QQEIAALL 179 (501)
Q Consensus 113 ~~g~~~~A~~l~~~M~~--~~gi~P~----~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~-----g-v~pd-~~t~~~Li 179 (501)
..|++++|..++++... +.-+.|+ ..+++.|-..|...|++++|..++++...- | --|+ ..+|+.|-
T Consensus 310 ~~g~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa 389 (433)
T 3qww_A 310 HYKSPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLG 389 (433)
T ss_dssp TTSCHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHH
T ss_pred hccCHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHH
Confidence 46789999999987622 2223344 288999999999999999999999887532 2 1233 35799999
Q ss_pred HHHHhcCChHHHHHHHHHHH
Q 010790 180 KVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~ 199 (501)
..|...|+.++|..++.+-.
T Consensus 390 ~~~~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 390 RLYMGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHhccCHHHHHHHHHHHH
Confidence 99999999999999998753
No 204
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=90.97 E-value=4.3 Score=39.63 Aligned_cols=177 Identities=11% Similarity=0.076 Sum_probs=113.7
Q ss_pred HHHHHHH---HHHhcCCHH-HHHHHHHHHHhCCCCCCHH-HHHHH---HHHHHhCCCCCCCChhhHHHHHHHHHHHHhCC
Q 010790 25 NFLINLQ---SCTKSKDLT-TAISLYESAHSQNLRLSLH-HFNAL---LYLCSDSATDPSSKDSALRHGFRVFDQMLSNN 96 (501)
Q Consensus 25 ~~n~lI~---~~~k~g~~~-~A~~lf~~m~~~gv~p~~~-ty~~L---L~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g 96 (501)
.|..+.+ ...+.|... +|+.+++.+...+ |+.+ .|+.= |....... ++......+++++.+++.+....
T Consensus 28 ~y~~~~~~~~~~~~~~e~s~eaL~~t~~~L~~n--P~~ytaWn~Rr~iL~~l~~~~-~~~~~~~~l~~EL~~~~~~L~~~ 104 (331)
T 3dss_A 28 LYQSATQAVFQKRQAGELDESVLELTSQILGAN--PDFATLWNCRREVLQHLETEK-SPEESAALVKAELGFLESCLRVN 104 (331)
T ss_dssp HHHHHHHHHHHHHHTTCCSHHHHHHHHHHHTTC--TTCHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHC--chhHHHHHHHHHHHHHhcccc-cchhhhHHHHHHHHHHHHHHHhC
Confidence 4544433 344566665 8999999998654 4323 34432 22111110 00000012678999999988753
Q ss_pred CCCCHHHHHHHHHHHHhCC--CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCC-HHHHHHHHHHHHHCCCCCCHH
Q 010790 97 VIPNEASVTSVARLAASKN--DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE-AEKAYEVEEHMGLMGLSLEQQ 173 (501)
Q Consensus 97 ~~pd~~t~~~li~~~~~~g--~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~-~~~A~~lf~~M~~~gv~pd~~ 173 (501)
. -+..+|+.---.+...| .+++++.+++.+ ....- -|-..|+.---.....|. .+++.+.++.+...... |..
T Consensus 105 P-Kny~aW~hR~wlL~~l~~~~~~~EL~~~~k~-l~~dp-rNy~AW~~R~~vl~~l~~~~~eel~~~~~~I~~~p~-N~S 180 (331)
T 3dss_A 105 P-KSYGTWHHRCWLLSRLPEPNWARELELCARF-LEADE-RNFHCWDYRRFVAAQAAVAPAEELAFTDSLITRNFS-NYS 180 (331)
T ss_dssp T-TCHHHHHHHHHHHHHCSSCCHHHHHHHHHHH-HHHCT-TCHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSC-CHH
T ss_pred C-CCHHHHHHHHHHHhccCcccHHHHHHHHHHH-HHhCC-CCHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHCCC-CHH
Confidence 3 37788888888888888 489999999999 55422 355666666666667787 68999999999987654 888
Q ss_pred HHHHHHHHHHhc--------------CChHHHHHHHHHHHhCCCCCCHHHH
Q 010790 174 EIAALLKVSAET--------------GRVEKVYQYLQKLRSTVRCVNEETG 210 (501)
Q Consensus 174 t~~~Li~~~~~~--------------g~~~~a~~ll~~M~~~~~~p~~~t~ 210 (501)
.|+-.-..+.+. +..+++++.+...... .|+..+.
T Consensus 181 AW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~--~P~d~Sa 229 (331)
T 3dss_A 181 SWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFT--DPNDQSA 229 (331)
T ss_dssp HHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHH--STTCHHH
T ss_pred HHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHh--CCCCHHH
Confidence 898877766654 3456777777766543 4555443
No 205
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=90.08 E-value=1.6 Score=32.17 Aligned_cols=64 Identities=11% Similarity=0.053 Sum_probs=53.6
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 137 LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 137 ~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
...+..+-..|...|++++|...|+...... ..+...|..+-..+.+.|+.++|...|.+....
T Consensus 9 ~~~~~~la~~~~~~~~~~~A~~~~~~a~~~~-~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 72 (91)
T 1na3_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALELD-PNNAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 72 (91)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHccCHHHHHHHHHHHHhcC-CCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhc
Confidence 4566777778899999999999999987653 236678899999999999999999999988764
No 206
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=89.84 E-value=2.1 Score=43.41 Aligned_cols=93 Identities=13% Similarity=0.100 Sum_probs=69.8
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhCC---CCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHh-----
Q 010790 27 LINLQSCTKSKDLTTAISLYESAHSQN---LRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLS----- 94 (501)
Q Consensus 27 n~lI~~~~k~g~~~~A~~lf~~m~~~g---v~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~----- 94 (501)
...|..+.+.|+.++|+.++++..+.. +.|+ ..+++.|..+|...| ++++|..++.+...
T Consensus 291 l~~ie~~~~~g~~~~a~~~~~~~L~~~~~~lg~~h~~~~~~~~~L~~~y~~~g--------~~~eA~~~~~~~L~i~~~~ 362 (429)
T 3qwp_A 291 LKKIEELKAHWKWEQVLAMCQAIISSNSERLPDINIYQLKVLDCAMDACINLG--------LLEEALFYGTRTMEPYRIF 362 (429)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHTCSSCCCCTTSHHHHHHHHHHHHHHHHHT--------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHhccCcCCccchHHHHHHHHHHHHHHhhc--------cHHHHHHHHHHHHHhHHHH
Confidence 345667778899999999999987532 3333 346777777887777 89999999998764
Q ss_pred CCC-CCC-HHHHHHHHHHHHhCCCHHHHHHHHHHh
Q 010790 95 NNV-IPN-EASVTSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 95 ~g~-~pd-~~t~~~li~~~~~~g~~~~A~~l~~~M 127 (501)
.|- .|+ ..+++.|-..|...|+.++|+.++.+.
T Consensus 363 lg~~Hp~~a~~l~nLa~~~~~~g~~~eA~~~~~~A 397 (429)
T 3qwp_A 363 FPGSHPVRGVQVMKVGKLQLHQGMFPQAMKNLRLA 397 (429)
T ss_dssp SCSSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred cCCCChHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 222 233 456888999999999999999988876
No 207
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=89.81 E-value=3.5 Score=35.66 Aligned_cols=95 Identities=13% Similarity=-0.004 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCC-C-----CHH-----HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLR-L-----SLH-----HFNALLYLCSDSATDPSSKDSALRHGFRVFDQML 93 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~-p-----~~~-----ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~ 93 (501)
.+...=..+.+.|++++|+..|++..+..-. | +.. .|+.+=.++...+ ++++|+..|+.-.
T Consensus 13 ~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p~~~~~~a~~~~~~~a~a~~n~g~al~~Lg--------r~~eAl~~~~kAL 84 (159)
T 2hr2_A 13 LALSDAQRQLVAGEYDEAAANCRRAMEISHTMPPEEAFDHAGFDAFCHAGLAEALAGLR--------SFDEALHSADKAL 84 (159)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTSCTTSCCCHHHHHHHHHHHHHHHHHHTT--------CHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHhhCCCCcchhhhhhccchHHHHHHHHHHHHHCC--------CHHHHHHHHHHHH
Confidence 4555666678899999999999997753321 0 222 5666655666777 8999999988876
Q ss_pred hC-----CCCCC-HHHH----HHHHHHHHhCCCHHHHHHHHHHh
Q 010790 94 SN-----NVIPN-EASV----TSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 94 ~~-----g~~pd-~~t~----~~li~~~~~~g~~~~A~~l~~~M 127 (501)
+. -+.|+ ...| ...-.++...|+.++|+.-|++.
T Consensus 85 ~l~n~~~e~~pd~~~A~~~~~~~rG~aL~~lgr~eEAl~~y~kA 128 (159)
T 2hr2_A 85 HYFNRRGELNQDEGKLWISAVYSRALALDGLGRGAEAMPEFKKV 128 (159)
T ss_dssp HHHHHHCCTTSTHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHH
T ss_pred HhhhccccCCCchHHHHHHHHHhHHHHHHHCCCHHHHHHHHHHH
Confidence 62 11443 3345 55666666777777777777665
No 208
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=89.77 E-value=5.2 Score=35.18 Aligned_cols=96 Identities=7% Similarity=0.116 Sum_probs=75.3
Q ss_pred hhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHH
Q 010790 80 SALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEV 159 (501)
Q Consensus 80 ~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~l 159 (501)
|+++.|.++-+++ -+...|..|-..+.+.|+++-|.+.|... +. |..+.--|.-.|+.++-.++
T Consensus 19 g~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~gn~~lAe~cy~~~-~D---------~~~L~~Ly~~tg~~e~L~kl 82 (177)
T 3mkq_B 19 GNLDAALDEAKKL------NDSITWERLIQEALAQGNASLAEMIYQTQ-HS---------FDKLSFLYLVTGDVNKLSKM 82 (177)
T ss_dssp TCHHHHHHHHHHH------CCHHHHHHHHHHHHHTTCHHHHHHHHHHT-TC---------HHHHHHHHHHHTCHHHHHHH
T ss_pred CCHHHHHHHHHHh------CCHHHHHHHHHHHHHcCChHHHHHHHHHh-CC---------HHHHHHHHHHhCCHHHHHHH
Confidence 3899999998877 47889999999999999999999999998 43 46667777778888887766
Q ss_pred HHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHH
Q 010790 160 EEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQK 197 (501)
Q Consensus 160 f~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~ 197 (501)
-+.-..+| -+|.-...+...|+.+++.++|.+
T Consensus 83 a~iA~~~g------~~n~af~~~l~lGdv~~~i~lL~~ 114 (177)
T 3mkq_B 83 QNIAQTRE------DFGSMLLNTFYNNSTKERSSIFAE 114 (177)
T ss_dssp HHHHHHTT------CHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred HHHHHHCc------cHHHHHHHHHHcCCHHHHHHHHHH
Confidence 55544444 256666677778888888888755
No 209
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=89.73 E-value=1.9 Score=43.91 Aligned_cols=84 Identities=2% Similarity=-0.128 Sum_probs=64.7
Q ss_pred hHHHHHHHHHHHHh---CCCCC---C-HHHHHHHHHHHHhCCCHHHHHHHHHHhHh----hcC-CCCCh-hhHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLS---NNVIP---N-EASVTSVARLAASKNDGDYAFVLIKRMNN----EFN-VVPRL-RTYDPALFCF 147 (501)
Q Consensus 81 ~~~~a~~lf~~M~~---~g~~p---d-~~t~~~li~~~~~~g~~~~A~~l~~~M~~----~~g-i~P~~-~ty~~lI~~~ 147 (501)
++++|..++++..+ .-+.| + ..+++.|..+|...|++++|+.++++... ..| -.|++ .+|+.|=..|
T Consensus 313 ~~~eA~~~~~~~L~i~~~~lg~~Hp~~a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~lG~~Hp~~a~~l~nLa~~~ 392 (433)
T 3qww_A 313 SPSELLEICELSQEKMSSVFEDSNVYMLHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHYPVYSLNVASMWLKLGRLY 392 (433)
T ss_dssp CHHHHHHHHHHHHHHHTTTBCTTSHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHSCSSCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhhCccChhchHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHH
Confidence 68889999988655 22223 2 46799999999999999999999987631 122 12444 7789999999
Q ss_pred HHcCCHHHHHHHHHHHH
Q 010790 148 CENLEAEKAYEVEEHMG 164 (501)
Q Consensus 148 ~~~g~~~~A~~lf~~M~ 164 (501)
...|+.++|..+|++..
T Consensus 393 ~~qg~~~eA~~~~~~Al 409 (433)
T 3qww_A 393 MGLENKAAGEKALKKAI 409 (433)
T ss_dssp HHTTCHHHHHHHHHHHH
T ss_pred HhccCHHHHHHHHHHHH
Confidence 99999999999998754
No 210
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=89.55 E-value=3.4 Score=44.73 Aligned_cols=84 Identities=13% Similarity=0.081 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC
Q 010790 56 LSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVP 135 (501)
Q Consensus 56 p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P 135 (501)
.+...|..|-.+|.+.+ +++.|.+.|..+.. |..+...|...|+.+...++-+.. ...|
T Consensus 679 ~~~~~W~~la~~al~~~--------~~~~A~~~y~~~~d---------~~~l~~l~~~~~~~~~~~~~~~~a-~~~~--- 737 (814)
T 3mkq_A 679 SAEMKWRALGDASLQRF--------NFKLAIEAFTNAHD---------LESLFLLHSSFNNKEGLVTLAKDA-ETTG--- 737 (814)
T ss_dssp CCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHTC---------HHHHHHHHHHTTCHHHHHHHHHHH-HHTT---
T ss_pred CcHhHHHHHHHHHHHcC--------CHHHHHHHHHHccC---------hhhhHHHHHHcCCHHHHHHHHHHH-HHcC---
Confidence 45688998888888888 89999999998842 556777777788888777666655 4433
Q ss_pred ChhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 010790 136 RLRTYDPALFCFCENLEAEKAYEVEEHM 163 (501)
Q Consensus 136 ~~~ty~~lI~~~~~~g~~~~A~~lf~~M 163 (501)
-++....+|.+.|++++|.+++.++
T Consensus 738 ---~~~~A~~~~~~~g~~~~a~~~~~~~ 762 (814)
T 3mkq_A 738 ---KFNLAFNAYWIAGDIQGAKDLLIKS 762 (814)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHHT
T ss_pred ---chHHHHHHHHHcCCHHHHHHHHHHc
Confidence 3466666777888888888887665
No 211
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=87.60 E-value=8.5 Score=38.07 Aligned_cols=154 Identities=10% Similarity=-0.018 Sum_probs=95.8
Q ss_pred CCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHh----CC-CHHHHHH---HH
Q 010790 54 LRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN-EASVTSVARLAAS----KN-DGDYAFV---LI 124 (501)
Q Consensus 54 v~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd-~~t~~~li~~~~~----~g-~~~~A~~---l~ 124 (501)
.+.+...|...|.+...... .....+.+|..+|++..+. .|+ ...|..+.-+|.. .+ ....... -+
T Consensus 190 ~p~~~~Aydl~Lra~~~l~~---~~~~~~~~A~~l~e~Al~l--DP~~a~A~A~la~a~~~~~~~~~~~~~~~~~l~~a~ 264 (372)
T 3ly7_A 190 LPHRGALLTNFYQAHDYLLH---GDDKSLNRASELLGEIVQS--SPEFTYARAEKALVDIVRHSQHPLDEKQLAALNTEI 264 (372)
T ss_dssp SCSSGGGHHHHHHHHHHHHH---CSHHHHHHHHHHHHHHHHH--CTTCHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHc---CCHHHHHHHHHHHHHHHHh--CCCCHHHHHHHHHHHHHHhccCCCchhhHHHHHHHH
Confidence 44566777777763322110 0122578899999998774 454 2334433333321 11 1111111 11
Q ss_pred HHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCC
Q 010790 125 KRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRC 204 (501)
Q Consensus 125 ~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~ 204 (501)
........-..+..+|.++-..+...|+++.|...++.....+ |+...|..+-..+.-.|+.++|.+.|++-... .
T Consensus 265 ~a~~a~~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rAl~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL--~ 340 (372)
T 3ly7_A 265 DNIVTLPELNNLSIIYQIKAVSALVKGKTDESYQAINTGIDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL--R 340 (372)
T ss_dssp HHHHTCGGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--S
T ss_pred HHHHhcccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHHHhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--C
Confidence 1110112224577888887777777899999999999999876 78888877778888899999999999876544 6
Q ss_pred CCHHHHHHHHHH
Q 010790 205 VNEETGKIIEDW 216 (501)
Q Consensus 205 p~~~t~~~i~~~ 216 (501)
|+..|+......
T Consensus 341 P~~~t~~~~~~l 352 (372)
T 3ly7_A 341 PGANTLYWIENG 352 (372)
T ss_dssp CSHHHHHHHHHS
T ss_pred CCcChHHHHhCc
Confidence 788776544433
No 212
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=87.54 E-value=22 Score=34.72 Aligned_cols=167 Identities=13% Similarity=0.025 Sum_probs=102.5
Q ss_pred CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCC-
Q 010790 38 DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND- 116 (501)
Q Consensus 38 ~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~- 116 (501)
++++++++++.+.+..- -|-..|+---.+....+.-.......+.++++.++++.+... -|...|+-.-..+.+.+.
T Consensus 140 ~~~~EL~~~~k~L~~dp-kNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp-~N~SAW~~R~~lL~~l~~~ 217 (349)
T 3q7a_A 140 DPVSEIEYIHGSLLPDP-KNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDG-RNNSAWGWRWYLRVSRPGA 217 (349)
T ss_dssp CCHHHHHHHHHHTSSCT-TCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHTTSTTC
T ss_pred ChHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHHhcccc
Confidence 66777777777775432 244555443222222210000011134589999999988643 488899998888888886
Q ss_pred ------HHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCH--------------------HHHHHHHHHHHHCC---
Q 010790 117 ------GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEA--------------------EKAYEVEEHMGLMG--- 167 (501)
Q Consensus 117 ------~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~--------------------~~A~~lf~~M~~~g--- 167 (501)
++++++.+++. ....- -|...|+-+-..+.+.|.. ....+...++...+
T Consensus 218 ~~~~~~~~eELe~~~~a-I~~~P-~n~SaW~Ylr~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (349)
T 3q7a_A 218 ETSSRSLQDELIYILKS-IHLIP-HNVSAWNYLRGFLKHFSLPLVPILPAILPYTASKLNPDIETVEAFGFPMPSDPLPE 295 (349)
T ss_dssp CCCHHHHHHHHHHHHHH-HHHCT-TCHHHHHHHHHHHHHTTCCSGGGHHHHGGGTC--------------CCCCC-CCCS
T ss_pred ccchHHHHHHHHHHHHH-HHhCC-CCHHHHHHHHHHHHhcCCCcccccccccccccccccccchhHHHHHHHHHhccccc
Confidence 68899998887 43322 3567777766666665543 22223333332221
Q ss_pred --CCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 168 --LSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 168 --v~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
-.++...+.-|.+.|...|+.++|.+++..+.+.--.....
T Consensus 296 ~~~~~s~~al~~l~d~~~~~~~~~~a~~~~~~l~~~~dpir~~ 338 (349)
T 3q7a_A 296 DTPLPVPLALEYLADSFIEQNRVDDAAKVFEKLSSEYDQMRAG 338 (349)
T ss_dssp SCCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCGGGHH
T ss_pred ccCCCcHHHHHHHHHHHHhcCCHHHHHHHHHHHHhhhChHHHH
Confidence 14678889999999999999999999999997654444333
No 213
>3q7a_A Farnesyltransferase alpha subunit; protein prenyltransferase, transferase-transferase inhibitor; HET: SUC 3FX FPP 778; 2.00A {Cryptococcus neoformans} PDB: 3q73_A* 3q78_A* 3q79_A* 3q75_A* 3q7f_A* 3sfx_A* 3sfy_A*
Probab=87.38 E-value=23 Score=34.66 Aligned_cols=171 Identities=9% Similarity=-0.016 Sum_probs=114.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHH
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVT 105 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~ 105 (501)
++.+-....+....++|+++++.+...+- -+...|+.-=......+. .+++++++++.+.....+ +..+|+
T Consensus 57 ~~~~r~~~~~~e~se~AL~lt~~~L~~nP-~~ytaWn~R~~iL~~l~~-------~l~eEL~~~~~~L~~nPK-ny~aW~ 127 (349)
T 3q7a_A 57 MDYFRAIAAKEEKSERALELTEIIVRMNP-AHYTVWQYRFSLLTSLNK-------SLEDELRLMNEFAVQNLK-SYQVWH 127 (349)
T ss_dssp HHHHHHHHHTTCCSHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTC-------CHHHHHHHHHHHHHTTCC-CHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHhCc-hhHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHHHhCCC-cHHHHH
Confidence 34444444556666899999999986542 123345544333333330 489999999999886443 777888
Q ss_pred HHHHHHHhC-C-CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHH--------HHHHHHHHHHHCCCCCCHHHH
Q 010790 106 SVARLAASK-N-DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE--------KAYEVEEHMGLMGLSLEQQEI 175 (501)
Q Consensus 106 ~li~~~~~~-g-~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~--------~A~~lf~~M~~~gv~pd~~t~ 175 (501)
.--..+... + ++++++++++.+ .... +-|-..|+.---.+.+.|..+ ++++.++.+.+.... |...|
T Consensus 128 hR~wlL~~l~~~~~~~EL~~~~k~-L~~d-pkNy~AW~~R~wvl~~l~~~~~~~~~~~~eELe~~~k~I~~dp~-N~SAW 204 (349)
T 3q7a_A 128 HRLLLLDRISPQDPVSEIEYIHGS-LLPD-PKNYHTWAYLHWLYSHFSTLGRISEAQWGSELDWCNEMLRVDGR-NNSAW 204 (349)
T ss_dssp HHHHHHHHHCCSCCHHHHHHHHHH-TSSC-TTCHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHCTT-CHHHH
T ss_pred HHHHHHHHhcCCChHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHhCCC-CHHHH
Confidence 877777776 7 899999999999 4431 124455554333333444444 899999999887654 88899
Q ss_pred HHHHHHHHhcCC-------hHHHHHHHHHHHhCCCCCCHHHH
Q 010790 176 AALLKVSAETGR-------VEKVYQYLQKLRSTVRCVNEETG 210 (501)
Q Consensus 176 ~~Li~~~~~~g~-------~~~a~~ll~~M~~~~~~p~~~t~ 210 (501)
+-.--.+.+.+. .+++++.+.+.... .|+..+.
T Consensus 205 ~~R~~lL~~l~~~~~~~~~~~eELe~~~~aI~~--~P~n~Sa 244 (349)
T 3q7a_A 205 GWRWYLRVSRPGAETSSRSLQDELIYILKSIHL--IPHNVSA 244 (349)
T ss_dssp HHHHHHHTTSTTCCCCHHHHHHHHHHHHHHHHH--CTTCHHH
T ss_pred HHHHHHHHhccccccchHHHHHHHHHHHHHHHh--CCCCHHH
Confidence 988888777765 57888888777654 5655544
No 214
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=86.85 E-value=6.2 Score=33.79 Aligned_cols=86 Identities=13% Similarity=-0.035 Sum_probs=57.1
Q ss_pred CChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC---CHHHHHHHHHHhHhhcCCCC-C-h-hhHHHHHHHHHHc
Q 010790 77 SKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKN---DGDYAFVLIKRMNNEFNVVP-R-L-RTYDPALFCFCEN 150 (501)
Q Consensus 77 ~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g---~~~~A~~l~~~M~~~~gi~P-~-~-~ty~~lI~~~~~~ 150 (501)
.....+..+.+-|.+....|. ++..+.-.+--+++++. +.+++..+|++. -+.. .| + . .-|+.- -+|.+.
T Consensus 9 l~~~~l~~~~~~y~~e~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~l-l~~~-~p~~~rd~lY~LA-v~~~kl 84 (152)
T 1pc2_A 9 VSVEDLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEEL-LPKG-SKEEQRDYVFYLA-VGNYRL 84 (152)
T ss_dssp CCHHHHHHHHHHHHHHHHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHH-HHHS-CHHHHHHHHHHHH-HHHHHT
T ss_pred CCHHHHHHHHHHHHHHHccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HhcC-CccchHHHHHHHH-HHHHHc
Confidence 344567778888887777665 57777777777888888 566899999888 4433 24 2 1 223332 345678
Q ss_pred CCHHHHHHHHHHHHHC
Q 010790 151 LEAEKAYEVEEHMGLM 166 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~ 166 (501)
|+.++|.+.++.+.+.
T Consensus 85 ~~Y~~A~~y~~~lL~i 100 (152)
T 1pc2_A 85 KEYEKALKYVRGLLQT 100 (152)
T ss_dssp SCHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhc
Confidence 8888888877777654
No 215
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=84.48 E-value=12 Score=36.94 Aligned_cols=146 Identities=10% Similarity=-0.064 Sum_probs=88.5
Q ss_pred HhHHHHHHHHHHh--c---CCHHHHHHHHHHHHhCCCCCC-HHHHHHHHHHHHh-CCCCCCCChhhHHHHHHHHHHHHh-
Q 010790 23 ETNFLINLQSCTK--S---KDLTTAISLYESAHSQNLRLS-LHHFNALLYLCSD-SATDPSSKDSALRHGFRVFDQMLS- 94 (501)
Q Consensus 23 ~~~~n~lI~~~~k--~---g~~~~A~~lf~~m~~~gv~p~-~~ty~~LL~~c~~-~~~~~~~k~~~~~~a~~lf~~M~~- 94 (501)
...|...+.+... . .+..+|+.+|++..+.. |+ ...|..+--++.. ...... ..........-+.....
T Consensus 194 ~~Aydl~Lra~~~l~~~~~~~~~~A~~l~e~Al~lD--P~~a~A~A~la~a~~~~~~~~~~-~~~~~~~l~~a~~a~~a~ 270 (372)
T 3ly7_A 194 GALLTNFYQAHDYLLHGDDKSLNRASELLGEIVQSS--PEFTYARAEKALVDIVRHSQHPL-DEKQLAALNTEIDNIVTL 270 (372)
T ss_dssp GGGHHHHHHHHHHHHHCSHHHHHHHHHHHHHHHHHC--TTCHHHHHHHHHHHHHHHHHSCC-CHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHHhccCCC-chhhHHHHHHHHHHHHhc
Confidence 3466666655432 2 34589999999988643 43 3444433222211 100000 01122222222222211
Q ss_pred CCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH
Q 010790 95 NNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE 174 (501)
Q Consensus 95 ~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t 174 (501)
.....+..+|.++.-.+...|++++|...+++. ...+ |+...|..+=..+.-.|+.++|.+.|++.... .|...+
T Consensus 271 ~~~~~~a~~~~alal~~l~~gd~d~A~~~l~rA-l~Ln--~s~~a~~llG~~~~~~G~~~eA~e~~~~AlrL--~P~~~t 345 (372)
T 3ly7_A 271 PELNNLSIIYQIKAVSALVKGKTDESYQAINTG-IDLE--MSWLNYVLLGKVYEMKGMNREAADAYLTAFNL--RPGANT 345 (372)
T ss_dssp GGGTTCHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHC--CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--SCSHHH
T ss_pred ccCCcCHHHHHHHHHHHHhCCCHHHHHHHHHHH-HhcC--CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHhc--CCCcCh
Confidence 223567888888887777789999999999999 5554 78777766666778899999999999887654 566666
Q ss_pred HH
Q 010790 175 IA 176 (501)
Q Consensus 175 ~~ 176 (501)
|.
T Consensus 346 ~~ 347 (372)
T 3ly7_A 346 LY 347 (372)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 216
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=84.22 E-value=5.5 Score=29.94 Aligned_cols=55 Identities=11% Similarity=-0.005 Sum_probs=30.7
Q ss_pred HHHHhCCCHHHHHHHHHHhHhhcCCCCC-hh-hHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 109 RLAASKNDGDYAFVLIKRMNNEFNVVPR-LR-TYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 109 ~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~~-ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
..+...|++++|...|++. ... .|+ .. .|..+-..|...|+.++|.+.|+.....
T Consensus 8 ~~~~~~~~~~~A~~~~~~a-l~~--~p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 8 KELINQGDIENALQALEEF-LQT--EPVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHTCHHHHHHHHHHH-HHH--CSSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHHH-HHH--CCCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3455566666666666665 222 132 33 4555555566666666666666665543
No 217
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=83.64 E-value=3.9 Score=30.85 Aligned_cols=57 Identities=11% Similarity=0.020 Sum_probs=47.2
Q ss_pred HHHHHHcCCHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 144 LFCFCENLEAEKAYEVEEHMGLMGLSLEQQ-EIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 144 I~~~~~~g~~~~A~~lf~~M~~~gv~pd~~-t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
-..+.+.|++++|...|+...... ..+.. .|..+-..|...|+.++|...|.+....
T Consensus 7 a~~~~~~~~~~~A~~~~~~al~~~-p~~~~~~~~~lg~~~~~~~~~~~A~~~~~~al~~ 64 (99)
T 2kc7_A 7 IKELINQGDIENALQALEEFLQTE-PVGKDEAYYLMGNAYRKLGDWQKALNNYQSAIEL 64 (99)
T ss_dssp HHHHHHHTCHHHHHHHHHHHHHHC-SSTHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHC-CCcHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 345778999999999999988753 22456 8888889999999999999999998765
No 218
>3dss_A Geranylgeranyl transferase type-2 subunit alpha; protein prenylation, metal-binding, prenyltransferase, zinc, phosphoprotein; 1.80A {Rattus norvegicus} PDB: 3dst_A* 3dsu_A* 3dsv_A* 3dsw_A* 3dsx_A* 3hxb_A* 3hxc_A* 3hxd_A* 3hxe_A* 3hxf_A* 3pz1_A* 3pz2_A* 3pz3_A* 3c72_A* 4gtv_A* 4gts_A* 4ehm_A* 4gtt_A*
Probab=83.61 E-value=33 Score=33.18 Aligned_cols=152 Identities=10% Similarity=-0.001 Sum_probs=106.6
Q ss_pred HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCC-H
Q 010790 39 LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND-G 117 (501)
Q Consensus 39 ~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~-~ 117 (501)
+++++.+++.+....- -+...|+.--.++...+. ..+++++++++.|.+.. +-|-.+|+----.....|. +
T Consensus 90 l~~EL~~~~~~L~~~P-Kny~aW~hR~wlL~~l~~------~~~~~EL~~~~k~l~~d-prNy~AW~~R~~vl~~l~~~~ 161 (331)
T 3dss_A 90 VKAELGFLESCLRVNP-KSYGTWHHRCWLLSRLPE------PNWARELELCARFLEAD-ERNFHCWDYRRFVAAQAAVAP 161 (331)
T ss_dssp HHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHCSS------CCHHHHHHHHHHHHHHC-TTCHHHHHHHHHHHHHTTCCH
T ss_pred HHHHHHHHHHHHHhCC-CCHHHHHHHHHHHhccCc------ccHHHHHHHHHHHHHhC-CCCHHHHHHHHHHHHHhCcCH
Confidence 6789999999886542 244556655444444430 03789999999998864 3488889888888888898 5
Q ss_pred HHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHc--------------CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q 010790 118 DYAFVLIKRMNNEFNVVPRLRTYDPALFCFCEN--------------LEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSA 183 (501)
Q Consensus 118 ~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~--------------g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~ 183 (501)
+++++.++.+ .+... -|...|+..-..+.+. +.++++.+.+.......- -|...|+-+-..+.
T Consensus 162 ~eel~~~~~~-I~~~p-~N~SAW~~R~~ll~~l~~~~~~~~~~~~~~~~~~eEle~~~~ai~~~P-~d~SaW~Y~r~ll~ 238 (331)
T 3dss_A 162 AEELAFTDSL-ITRNF-SNYSSWHYRSCLLPQLHPQPDSGPQGRLPENVLLKELELVQNAFFTDP-NDQSAWFYHRWLLG 238 (331)
T ss_dssp HHHHHHHHHH-HHHCS-CCHHHHHHHHHHHHHHSCCC------CCCHHHHHHHHHHHHHHHHHST-TCHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHCC-CCHHHHHHHHHHHHHhhhccccccccccchHHHHHHHHHHHHHHHhCC-CCHHHHHHHHHHHH
Confidence 9999999999 55543 4666777665555544 447888888888776543 37888887666655
Q ss_pred hc-----------CChHHHHHHHHHHHhC
Q 010790 184 ET-----------GRVEKVYQYLQKLRST 201 (501)
Q Consensus 184 ~~-----------g~~~~a~~ll~~M~~~ 201 (501)
+. +..+++++.++++.+.
T Consensus 239 ~~~~~~~~~~~~~~~l~~el~~~~elle~ 267 (331)
T 3dss_A 239 AGSGRCELSVEKSTVLQSELESCKELQEL 267 (331)
T ss_dssp SSSCGGGCCHHHHHHHHHHHHHHHHHHHH
T ss_pred hccCccccchHHHHHHHHHHHHHHHHHhh
Confidence 54 3467788888887754
No 219
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=82.37 E-value=8 Score=38.49 Aligned_cols=118 Identities=8% Similarity=-0.049 Sum_probs=82.1
Q ss_pred CCHHHHHHHHHHHH---hCCCHHHHHHHHHHhHhhc-C-CCCCh------------------hhHHHHHHHHHHcCCHHH
Q 010790 99 PNEASVTSVARLAA---SKNDGDYAFVLIKRMNNEF-N-VVPRL------------------RTYDPALFCFCENLEAEK 155 (501)
Q Consensus 99 pd~~t~~~li~~~~---~~g~~~~A~~l~~~M~~~~-g-i~P~~------------------~ty~~lI~~~~~~g~~~~ 155 (501)
.|...|..++.... ..|+.+.|...+.+...-. | +-|+. .....++..+...|+.+.
T Consensus 110 ~D~~~f~~l~~~~~~~~~~~~~~~a~~~l~~Al~L~rG~~L~~~~~~~w~~~~r~~l~~~~~~a~~~~~~~~l~~g~~~~ 189 (388)
T 2ff4_A 110 CDLGRFVAEKTAGVHAAAAGRFEQASRHLSAALREWRGPVLDDLRDFQFVEPFATALVEDKVLAHTAKAEAEIACGRASA 189 (388)
T ss_dssp BHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCSSTTGGGTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred chHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhcCCCCCCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHH
Confidence 35556666665432 3578887777777652111 1 11221 122345667778999999
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHh-----CCCCCCHHHHHHHHHHh
Q 010790 156 AYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRS-----TVRCVNEETGKIIEDWF 217 (501)
Q Consensus 156 A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~-----~~~~p~~~t~~~i~~~f 217 (501)
|......+.... ..++..|..||.+|.+.|+..+|++.|++++. -|+.|++.+........
T Consensus 190 a~~~l~~~~~~~-P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il 255 (388)
T 2ff4_A 190 VIAELEALTFEH-PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERIL 255 (388)
T ss_dssp HHHHHHHHHHHS-TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHH
Confidence 998888776542 34888999999999999999999999998755 59999999876655444
No 220
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=81.94 E-value=26 Score=30.69 Aligned_cols=129 Identities=9% Similarity=0.023 Sum_probs=90.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010790 31 QSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARL 110 (501)
Q Consensus 31 ~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~ 110 (501)
+...+.|+++.|.++-+++ -+...|..|=..+...+ +++-|.+.|.... | |..+.-.
T Consensus 13 ~LAL~lg~l~~A~e~a~~l------~~~~~Wk~Lg~~AL~~g--------n~~lAe~cy~~~~------D---~~~L~~L 69 (177)
T 3mkq_B 13 DLALEYGNLDAALDEAKKL------NDSITWERLIQEALAQG--------NASLAEMIYQTQH------S---FDKLSFL 69 (177)
T ss_dssp HHHHHTTCHHHHHHHHHHH------CCHHHHHHHHHHHHHTT--------CHHHHHHHHHHTT------C---HHHHHHH
T ss_pred HHHHhcCCHHHHHHHHHHh------CCHHHHHHHHHHHHHcC--------ChHHHHHHHHHhC------C---HHHHHHH
Confidence 3455789999999998776 35689999998777776 7999999999873 2 5667777
Q ss_pred HHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHH
Q 010790 111 AASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEK 190 (501)
Q Consensus 111 ~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~ 190 (501)
|...|+.+.-..+-+.- ...| -+|.....+.-.|+++++.++|.+. |-.|. .++ .....|..+.
T Consensus 70 y~~tg~~e~L~kla~iA-~~~g------~~n~af~~~l~lGdv~~~i~lL~~~---~r~~e----A~~--~A~t~g~~~~ 133 (177)
T 3mkq_B 70 YLVTGDVNKLSKMQNIA-QTRE------DFGSMLLNTFYNNSTKERSSIFAEG---GSLPL----AYA--VAKANGDEAA 133 (177)
T ss_dssp HHHHTCHHHHHHHHHHH-HHTT------CHHHHHHHHHHHTCHHHHHHHHHHT---TCHHH----HHH--HHHHTTCHHH
T ss_pred HHHhCCHHHHHHHHHHH-HHCc------cHHHHHHHHHHcCCHHHHHHHHHHC---CChHH----HHH--HHHHcCcHHH
Confidence 88889888776665544 3333 4677778888899999999998654 22211 111 1112566677
Q ss_pred HHHHHHHH
Q 010790 191 VYQYLQKL 198 (501)
Q Consensus 191 a~~ll~~M 198 (501)
|.+++..+
T Consensus 134 a~~~~~~~ 141 (177)
T 3mkq_B 134 ASAFLEQA 141 (177)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 77776665
No 221
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=80.42 E-value=21 Score=34.06 Aligned_cols=127 Identities=7% Similarity=-0.015 Sum_probs=85.1
Q ss_pred HHHHHHHH-HHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhC-----CCHHHHHHHHHHhHh
Q 010790 59 HHFNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN---EASVTSVARLAASK-----NDGDYAFVLIKRMNN 129 (501)
Q Consensus 59 ~ty~~LL~-~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd---~~t~~~li~~~~~~-----g~~~~A~~l~~~M~~ 129 (501)
..|..++. ...........-.+.+..|..++++..+. .|+ -..|+.|...|.+. |+.++|.+.|++- .
T Consensus 155 L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerAleL--DP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferA-L 231 (301)
T 3u64_A 155 LYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERACDL--WPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHL-T 231 (301)
T ss_dssp HHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHHHHH--CTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHHHHh--CCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHH-H
Confidence 34555554 33333223344445677788888877663 454 66899999999995 9999999999988 3
Q ss_pred hcCCCCC--hhhHHHHHHHHHHc-CCHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 130 EFNVVPR--LRTYDPALFCFCEN-LEAEKAYEVEEHMGLMGLS--LEQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 130 ~~gi~P~--~~ty~~lI~~~~~~-g~~~~A~~lf~~M~~~gv~--pd~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
. +.|+ .-++...-..+|+. |+.+.|.+.+++-...... |+....|.+- -.+|..++.+.
T Consensus 232 ~--LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~~--------q~eA~~LL~~~ 295 (301)
T 3u64_A 232 R--YCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVILS--------QKRARWLKAHV 295 (301)
T ss_dssp H--HCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHHH--------HHHHHHHHHTH
T ss_pred H--hCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHHH--------HHHHHHHHHHh
Confidence 3 3363 66777777778884 9999999999998887665 6654444332 24555555544
No 222
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=79.35 E-value=15 Score=31.59 Aligned_cols=97 Identities=6% Similarity=-0.105 Sum_probs=58.6
Q ss_pred ChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCH----------HHHHHHHHHhHhhcCCCCC-hhhHHHHHHH
Q 010790 78 KDSALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDG----------DYAFVLIKRMNNEFNVVPR-LRTYDPALFC 146 (501)
Q Consensus 78 k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~----------~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~ 146 (501)
+.+.+++|.+.++...+... -+...|+.+-.++...+++ ++|...|++. .+ +.|+ ...|..+=.+
T Consensus 14 r~~~feeA~~~~~~Ai~l~P-~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~A-L~--ldP~~~~A~~~LG~a 89 (158)
T 1zu2_A 14 RILLFEQIRQDAENTYKSNP-LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEA-LL--IDPKKDEAVWCIGNA 89 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHH-HH--HCTTCHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHH-HH--hCcCcHHHHHHHHHH
Confidence 34567888888887766432 2666777666677766654 4777777766 32 2343 3566666666
Q ss_pred HHHcC-----------CHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 147 FCENL-----------EAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 147 ~~~~g-----------~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
|...| ++++|.+.|+...+. .|+...|..-+.
T Consensus 90 y~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l--~P~~~~y~~al~ 132 (158)
T 1zu2_A 90 YTSFAFLTPDETEAKHNFDLATQFFQQAVDE--QPDNTHYLKSLE 132 (158)
T ss_dssp HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH--CTTCHHHHHHHH
T ss_pred HHHhcccCcchhhhhccHHHHHHHHHHHHHh--CCCCHHHHHHHH
Confidence 66553 677777777666543 455444444433
No 223
>3dra_A Protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha; geranylgeranyltrasferase, ggtase, ggtase-I, PGGT, prenyltransferase, farnesyltransferase; HET: B3P GRG; 1.80A {Candida albicans}
Probab=78.95 E-value=46 Score=31.72 Aligned_cols=152 Identities=10% Similarity=0.121 Sum_probs=86.7
Q ss_pred HHHHHHHHHhcC--CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH----HhCCCCCCCChhhHHHHHHHHHHHHhCCCCC
Q 010790 26 FLINLQSCTKSK--DLTTAISLYESAHSQNLRLSLHHFNALLYLC----SDSATDPSSKDSALRHGFRVFDQMLSNNVIP 99 (501)
Q Consensus 26 ~n~lI~~~~k~g--~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c----~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p 99 (501)
||.-=..+...| ++++++.+++.+...+-+ +...|+.--... ...+. .+.+++++++++.+.+.. +-
T Consensus 70 Wn~R~~~L~~l~~~~~~eeL~~~~~~L~~nPk-~y~aW~~R~~iL~~~~~~l~~-----~~~~~~EL~~~~~~l~~~-pk 142 (306)
T 3dra_A 70 WIYRFNILKNLPNRNLYDELDWCEEIALDNEK-NYQIWNYRQLIIGQIMELNNN-----DFDPYREFDILEAMLSSD-PK 142 (306)
T ss_dssp HHHHHHHHHTCTTSCHHHHHHHHHHHHHHCTT-CCHHHHHHHHHHHHHHHHTTT-----CCCTHHHHHHHHHHHHHC-TT
T ss_pred HHHHHHHHHHcccccHHHHHHHHHHHHHHCcc-cHHHHHHHHHHHHHHHHhccc-----cCCHHHHHHHHHHHHHhC-CC
Confidence 333333344455 777777777776654321 122333322222 22210 015677777777777643 33
Q ss_pred CHHHHHHHHHHHHhCCCHH--HHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCC------HHHHHHHHHHHHHCCCCCC
Q 010790 100 NEASVTSVARLAASKNDGD--YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE------AEKAYEVEEHMGLMGLSLE 171 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~--~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~------~~~A~~lf~~M~~~gv~pd 171 (501)
|-.+|+----.+.+.|.++ ++++.++.+ .+... -|...|+.--....+.|. ++++++.++.+...... |
T Consensus 143 ny~aW~~R~~vl~~l~~~~~~~EL~~~~~~-i~~d~-~N~sAW~~R~~ll~~l~~~~~~~~~~eEl~~~~~aI~~~p~-n 219 (306)
T 3dra_A 143 NHHVWSYRKWLVDTFDLHNDAKELSFVDKV-IDTDL-KNNSAWSHRFFLLFSKKHLATDNTIDEELNYVKDKIVKCPQ-N 219 (306)
T ss_dssp CHHHHHHHHHHHHHTTCTTCHHHHHHHHHH-HHHCT-TCHHHHHHHHHHHHSSGGGCCHHHHHHHHHHHHHHHHHCSS-C
T ss_pred CHHHHHHHHHHHHHhcccChHHHHHHHHHH-HHhCC-CCHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHHhCCC-C
Confidence 6777777777777777777 777777777 44432 244555544444444454 67777777777665443 6
Q ss_pred HHHHHHHHHHHHhcCC
Q 010790 172 QQEIAALLKVSAETGR 187 (501)
Q Consensus 172 ~~t~~~Li~~~~~~g~ 187 (501)
...|+-+-..+.+.|.
T Consensus 220 ~SaW~y~~~ll~~~~~ 235 (306)
T 3dra_A 220 PSTWNYLLGIHERFDR 235 (306)
T ss_dssp HHHHHHHHHHHHHTTC
T ss_pred ccHHHHHHHHHHhcCC
Confidence 6777777666666654
No 224
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=77.97 E-value=3.8 Score=36.86 Aligned_cols=155 Identities=12% Similarity=0.037 Sum_probs=87.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH---HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH-
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSL---HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS- 103 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~---~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t- 103 (501)
+.|...++.|+.+....+++.+.+.|..++. .-++.|..++.... .++.+.+.+.|..++...
T Consensus 11 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~ 77 (241)
T 1k1a_A 11 TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTL-------------PSVVRLLVTAGASPMALDR 77 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTCCCT
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCC-------------HHHHHHHHHcCCCccccCC
Confidence 4566778889999888888877777755442 23445555555543 456666777777654322
Q ss_pred -HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC---ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH---HHH
Q 010790 104 -VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP---RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ---EIA 176 (501)
Q Consensus 104 -~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P---~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~---t~~ 176 (501)
-.+.+...+..|+.+.+..+++.. ...++.+ +..-.++ |...+..|+.+-... +.+.|..++.. .-.
T Consensus 78 ~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~~~~g~t~-L~~A~~~~~~~~~~~----Ll~~g~~~~~~~~~~g~ 151 (241)
T 1k1a_A 78 HGQTAAHLACEHRSPTCLRALLDSA-APGTLDLEARNYDGLTA-LHVAVNTECQETVQL----LLERGADIDAVDIKSGR 151 (241)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHHHS-CTTSCCTTCCCTTSCCH-HHHHHHHTCHHHHHH----HHHTTCCTTCCCTTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcC-CCccccccccCcCCCcH-HHHHHHcCCHHHHHH----HHHcCCCcccccccCCC
Confidence 123455667789988888887776 4322222 2233344 444456777655444 44455544321 122
Q ss_pred HHHHHHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 177 ALLKVSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 177 ~Li~~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
+.+...+..|..+ +++.+.+.|..+
T Consensus 152 t~L~~A~~~~~~~----~v~~Ll~~g~~~ 176 (241)
T 1k1a_A 152 SPLIHAVENNSLS----MVQLLLQHGANV 176 (241)
T ss_dssp CHHHHHHHTTCHH----HHHHHHHTTCCT
T ss_pred cHHHHHHHcCCHH----HHHHHHHcCCCC
Confidence 3344445667654 333444445444
No 225
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=77.61 E-value=7.5 Score=33.48 Aligned_cols=122 Identities=12% Similarity=0.034 Sum_probs=77.6
Q ss_pred HhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCC-C-CCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHHHHH
Q 010790 34 TKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSA-T-DPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVARLA 111 (501)
Q Consensus 34 ~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~-~-~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~ 111 (501)
.|.+.+++|+..|+...+..- -+...|+.+=.++...+ . .+....+.+++|+..|++..+.... +..+|..+-.+|
T Consensus 13 ~r~~~feeA~~~~~~Ai~l~P-~~aea~~n~G~~l~~l~~~~~g~~al~~~~eAi~~le~AL~ldP~-~~~A~~~LG~ay 90 (158)
T 1zu2_A 13 DRILLFEQIRQDAENTYKSNP-LDADNLTRWGGVLLELSQFHSISDAKQMIQEAITKFEEALLIDPK-KDEAVWCIGNAY 90 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHCTT-CHHHHHHHHHHH
T ss_pred HHHhHHHHHHHHHHHHHHHCC-CCHHHHHHHHHHHHHhcccchhhhhHhHHHHHHHHHHHHHHhCcC-cHHHHHHHHHHH
Confidence 455678899999998876542 24555554433333322 0 0000011367999999998774322 566788888888
Q ss_pred HhCC-----------CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 112 ASKN-----------DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 112 ~~~g-----------~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
...| ++++|.+.|++. .+ +.|+...|...|... ++|-+++-+....
T Consensus 91 ~~lg~l~P~~~~a~g~~~eA~~~~~kA-l~--l~P~~~~y~~al~~~------~ka~el~~~~~~~ 147 (158)
T 1zu2_A 91 TSFAFLTPDETEAKHNFDLATQFFQQA-VD--EQPDNTHYLKSLEMT------AKAPQLHAEAYKQ 147 (158)
T ss_dssp HHHHHHCCCHHHHHHHHHHHHHHHHHH-HH--HCTTCHHHHHHHHHH------HTHHHHHHHHHHS
T ss_pred HHhcccCcchhhhhccHHHHHHHHHHH-HH--hCCCCHHHHHHHHHH------HhCHhccCccccc
Confidence 8764 899999999988 33 458887776666643 5566666555544
No 226
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=75.74 E-value=27 Score=29.75 Aligned_cols=96 Identities=15% Similarity=0.043 Sum_probs=67.7
Q ss_pred HHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcC---CHHHHHHHHHHHHHCCCCC--CHHHHHHHHHHHHhcCChHHH
Q 010790 117 GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENL---EAEKAYEVEEHMGLMGLSL--EQQEIAALLKVSAETGRVEKV 191 (501)
Q Consensus 117 ~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g---~~~~A~~lf~~M~~~gv~p--d~~t~~~Li~~~~~~g~~~~a 191 (501)
...+.+-|.+. ...+- ++..+--.+--++++.. +++++..++++..+.+ .| ....+-.|--+|.+.|++++|
T Consensus 14 l~~~~~~y~~e-~~~~~-~~~~~~F~ya~~Lv~S~~~~~~~~gI~lLe~ll~~~-~p~~~rd~lY~LAv~~~kl~~Y~~A 90 (152)
T 1pc2_A 14 LLKFEKKFQSE-KAAGS-VSKSTQFEYAWCLVRSKYNDDIRKGIVLLEELLPKG-SKEEQRDYVFYLAVGNYRLKEYEKA 90 (152)
T ss_dssp HHHHHHHHHHH-HHTTC-CCHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHHHHS-CHHHHHHHHHHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHH-HccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhcC-CccchHHHHHHHHHHHHHccCHHHH
Confidence 44566666665 44444 56666555566777877 7789999999998864 34 234555566678999999999
Q ss_pred HHHHHHHHhCCCCCCHHHHHHHHHHh
Q 010790 192 YQYLQKLRSTVRCVNEETGKIIEDWF 217 (501)
Q Consensus 192 ~~ll~~M~~~~~~p~~~t~~~i~~~f 217 (501)
.+.++.+.+. .|+..-+..+...+
T Consensus 91 ~~y~~~lL~i--eP~n~QA~~Lk~~i 114 (152)
T 1pc2_A 91 LKYVRGLLQT--EPQNNQAKELERLI 114 (152)
T ss_dssp HHHHHHHHHH--CTTCHHHHHHHHHH
T ss_pred HHHHHHHHhc--CCCCHHHHHHHHHH
Confidence 9999998866 77666655555555
No 227
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=75.63 E-value=25 Score=29.59 Aligned_cols=148 Identities=9% Similarity=-0.000 Sum_probs=71.6
Q ss_pred HHHHHHHH--HHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 25 NFLINLQS--CTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 25 ~~n~lI~~--~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
....|+++ ..-.|.+++..++..+..... +..-||-+|--...+. +-+-.+++++.. |--.|.
T Consensus 7 l~kkLmeAK~~ildG~v~qGveii~k~~~ss---ni~E~NW~ICNiiD~a--------~C~y~v~vLd~I---GkiFDi- 71 (172)
T 1wy6_A 7 IIRKLMDAKKFLLDGYIDEGVKIVLEITKSS---TKSEYNWFICNLLESI--------DCRYMFQVLDKI---GSYFDL- 71 (172)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS---CHHHHTHHHHHHHHHC--------CHHHHHHHHHHH---GGGSCG-
T ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHcCCC---Cccccceeeeecchhh--------chhHHHHHHHHH---hhhcCc-
Confidence 34455554 445688999999998876433 1244555554222221 222233333332 222222
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVS 182 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~ 182 (501)
..+|++.....-+-.+ . -+..-++..|+.....|.-|.-.+++.++.. +..|+....-.+-.+|
T Consensus 72 ---------s~C~NlKrVi~C~~~~-n-----~~se~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay 135 (172)
T 1wy6_A 72 ---------DKCQNLKSVVECGVIN-N-----TLNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANAL 135 (172)
T ss_dssp ---------GGCSCTHHHHHHHHHT-T-----CCCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHH
T ss_pred ---------HhhhcHHHHHHHHHHh-c-----chHHHHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHH
Confidence 2244444444444333 1 1333444555555555555555555555322 2344455555555555
Q ss_pred HhcCChHHHHHHHHHHHhCCC
Q 010790 183 AETGRVEKVYQYLQKLRSTVR 203 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M~~~~~ 203 (501)
.+-|+..+|-+++.+--+.|+
T Consensus 136 ~Klg~~r~a~eLl~~AC~kG~ 156 (172)
T 1wy6_A 136 RRVGDERDATTLLIEACKKGE 156 (172)
T ss_dssp HHTTCHHHHHHHHHHHHHTTC
T ss_pred HHhcchhhHHHHHHHHHHhhh
Confidence 555555555555555555544
No 228
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=75.26 E-value=9 Score=30.34 Aligned_cols=59 Identities=12% Similarity=0.203 Sum_probs=32.5
Q ss_pred HHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHH
Q 010790 85 GFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALF 145 (501)
Q Consensus 85 a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~ 145 (501)
..+-++.+......|+.....+.+++|-+..++..|.++|+.+ +. ++.+...+|..+|+
T Consensus 29 ~rrglN~l~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~i-K~-K~~~~~~iY~~~lq 87 (109)
T 1v54_E 29 LRKGMNTLVGYDLVPEPKIIDAALRACRRLNDFASAVRILEVV-KD-KAGPHKEIYPYVIQ 87 (109)
T ss_dssp HHHHHHHHTTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHH-HH-HTTTCTTHHHHHHH
T ss_pred HHHHHHHHhccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHH-HH-HhcCchhhHHHHHH
Confidence 4444444444555666666666666666666666666666666 22 22223334555544
No 229
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=75.19 E-value=18 Score=27.98 Aligned_cols=66 Identities=8% Similarity=0.116 Sum_probs=44.2
Q ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc-----CCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHH
Q 010790 100 NEASVTSVARLAASKNDGDYAFVLIKRMNNEF-----NVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~-----gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~ 165 (501)
+..-+-.|-..+...|++..|...|++..+.. .-.+....+..+-.+|.+.|+++.|..++++...
T Consensus 4 sa~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 4 TAEDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHh
Confidence 34445567777788888888888887762211 0113456677777777788888888888877765
No 230
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=75.04 E-value=13 Score=36.86 Aligned_cols=69 Identities=9% Similarity=0.038 Sum_probs=55.5
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHH-----CCCCCCHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGL-----MGLSLEQQE 174 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~-----~gv~pd~~t 174 (501)
...++..+.+.|+.++|...+..+.... +-+...|-.+|.+|.+.|+..+|.++|+.... .|+.|+..+
T Consensus 174 ~~~~~~~~l~~g~~~~a~~~l~~~~~~~--P~~E~~~~~lm~al~~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l 247 (388)
T 2ff4_A 174 HTAKAEAEIACGRASAVIAELEALTFEH--PYREPLWTQLITAYYLSDRQSDALGAYRRVKTTLADDLGIDPGPTL 247 (388)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTCHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHSCCCCHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHhC--CCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhCCCCCHHH
Confidence 3456777888999999999988883333 23778999999999999999999999998754 388887653
No 231
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=68.69 E-value=52 Score=28.08 Aligned_cols=106 Identities=13% Similarity=0.000 Sum_probs=71.0
Q ss_pred CHHHHHHHHHHHHhCCCH------HHHHHHHHHhHhhcCCCCCh----hhHHHHHHHHH---HcCCHHHHHHHHHHHHHC
Q 010790 100 NEASVTSVARLAASKNDG------DYAFVLIKRMNNEFNVVPRL----RTYDPALFCFC---ENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 100 d~~t~~~li~~~~~~g~~------~~A~~l~~~M~~~~gi~P~~----~ty~~lI~~~~---~~g~~~~A~~lf~~M~~~ 166 (501)
|.-+|=..|...-+.|++ +..+++|++. . ..++|+. +.|--|.--|+ ..+|+++|.++|+.+.+.
T Consensus 12 ~yd~W~~yl~llE~~g~p~~d~~l~rlrd~YerA-i-a~~Pp~k~~~wrrYI~LWIrYA~~~ei~D~d~aR~vy~~a~~~ 89 (161)
T 4h7y_A 12 NPEDWLSLLLKLEKNSVPLSDALLNKLIGRYSQA-I-EALPPDKYGQNESFARIQVRFAELKAIQEPDDARDYFQMARAN 89 (161)
T ss_dssp SHHHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHH-H-HHSCGGGGTTCHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCchhhHHHHHHHHHHHH-H-HcCCccccccHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 455666777777767777 7777788766 2 3455543 33433333332 348999999999999754
Q ss_pred CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHH
Q 010790 167 GLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEE 208 (501)
Q Consensus 167 gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~ 208 (501)
.-.- ...|-..-.-=.+.|+..+|..++.+-...+-.|.+.
T Consensus 90 hKkF-AKiwi~~AqFEiRqgnl~kARkILg~AiG~~~k~~~~ 130 (161)
T 4h7y_A 90 CKKF-AFVHISFAQFELSQGNVKKSKQLLQKAVERGAVPLEM 130 (161)
T ss_dssp CTTB-HHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCBCHHH
T ss_pred hHHH-HHHHHHHHHHHHHcccHHHHHHHHHHHhccCCCcHHH
Confidence 2222 5566666565667999999999999988876666553
No 232
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=68.42 E-value=57 Score=35.44 Aligned_cols=129 Identities=10% Similarity=0.063 Sum_probs=79.6
Q ss_pred HHHHHHHHHHhCCCCCCCChhh-HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCH-HHHHHHHHHhHhh-----cC
Q 010790 60 HFNALLYLCSDSATDPSSKDSA-LRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDG-DYAFVLIKRMNNE-----FN 132 (501)
Q Consensus 60 ty~~LL~~c~~~~~~~~~k~~~-~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~-~~A~~l~~~M~~~-----~g 132 (501)
-..+|+..+...+ . .+.|..+|+++......-+.....++|..+...++- -+|..++.+..+. ..
T Consensus 250 L~~~Ll~~~~~t~--------~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~~~Ev~av~ll~~~l~~~~~~~~~ 321 (754)
T 4gns_B 250 LMYSLKSFIAITP--------SLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIETKELDMITILNETLDPLLSLLND 321 (754)
T ss_dssp HHHHHHHHHHTCG--------GGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCGGGHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcccc--------cHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Confidence 3455566665544 4 678999999988754333333334555554444432 2355554443121 12
Q ss_pred CCCChhh------H-HHHHH----HHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHHHHHhcCChHHHHHHHHHH
Q 010790 133 VVPRLRT------Y-DPALF----CFCENLEAEKAYEVEEHMGLMGLSL-EQQEIAALLKVSAETGRVEKVYQYLQKL 198 (501)
Q Consensus 133 i~P~~~t------y-~~lI~----~~~~~g~~~~A~~lf~~M~~~gv~p-d~~t~~~Li~~~~~~g~~~~a~~ll~~M 198 (501)
+.+.... + ..||. -+...|+.+.|+++-..-... .| +-.+|..|..+|...|+++.|+-.++-|
T Consensus 322 l~~~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~~--aPseF~tW~~La~vYi~l~d~e~ALLtLNSc 397 (754)
T 4gns_B 322 LPPRDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTEL--ALDSFESWYNLARCHIKKEEYEKALFAINSM 397 (754)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CSSCHHHHHHHHHHHHHTTCHHHHHHHHHHS
T ss_pred hcccccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHhc--CchhhHHHHHHHHHHHHhccHHHHHHHHhcC
Confidence 2222111 1 12333 244689999999998876553 45 4679999999999999999999999887
No 233
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=67.66 E-value=6.8 Score=34.04 Aligned_cols=161 Identities=9% Similarity=-0.049 Sum_probs=81.5
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--HHHH
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS--VTSV 107 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t--~~~l 107 (501)
|...++.|+.+....++..-...--..+..-++.|..++.... .++.+.+.+.|..++... -.+.
T Consensus 9 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~~g~t~ 75 (201)
T 3hra_A 9 LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNND-------------IEIAKALIDRGADINLQNSISDSP 75 (201)
T ss_dssp HHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTC-------------HHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCC-------------HHHHHHHHHcCCCCCCCCCCCCCH
Confidence 4455677888877766643210001223334556666666654 456666677777654322 1234
Q ss_pred HHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC
Q 010790 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR 187 (501)
Q Consensus 108 i~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~ 187 (501)
+...+..|+.+-+..+++.- ...--.++..-.++ |...++.|+.+.+..+++.-...--..|..-++.|..+. ..+.
T Consensus 76 l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~-~~~~ 152 (201)
T 3hra_A 76 YLYAGAQGRTEILAYMLKHA-TPDLNKHNRYGGNA-LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAV-GLRE 152 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHS-CCCTTCCCTTSCCS-HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHH-HSSC
T ss_pred HHHHHHcCCHHHHHHHHhcc-CcccccccCCCCcH-HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHH-Hhcc
Confidence 45556788888777777554 21111123223333 444567888776666554420000012333344444444 3333
Q ss_pred -hHHHHHHHHHHHhCCCCCC
Q 010790 188 -VEKVYQYLQKLRSTVRCVN 206 (501)
Q Consensus 188 -~~~a~~ll~~M~~~~~~p~ 206 (501)
...-.++++.+.+.|..|+
T Consensus 153 ~~~~~~~~v~~Ll~~ga~~~ 172 (201)
T 3hra_A 153 GNQLYQDIVKLLMENGADQS 172 (201)
T ss_dssp CSHHHHHHHHHHHHTTCCTT
T ss_pred chhhHHHHHHHHHHCCCCCC
Confidence 3333566666666666654
No 234
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=67.11 E-value=37 Score=27.88 Aligned_cols=83 Identities=16% Similarity=0.013 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHH---HHHHHHHhHhhcCCCC-ChhhHHHHH-HHHHHcCCHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDY---AFVLIKRMNNEFNVVP-RLRTYDPAL-FCFCENLEAEK 155 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~---A~~l~~~M~~~~gi~P-~~~ty~~lI-~~~~~~g~~~~ 155 (501)
.+..+.+-|......|. ++..+--.+.-+++++.+... +..++.+. -+.+ .| +.+-|.-.| -||.+.|+.++
T Consensus 16 ~l~~~~~~y~~e~~~~~-~s~~~~F~yAw~Lv~S~~~~d~~~GI~lLe~l-~~~~-~p~~~Rd~lY~LAvg~yklg~Y~~ 92 (126)
T 1nzn_A 16 DLLKFEKKFQSEKAAGS-VSKSTQFEYAWCLVRTRYNDDIRKGIVLLEEL-LPKG-SKEEQRDYVFYLAVGNYRLKEYEK 92 (126)
T ss_dssp HHHHHHHHHHHHHHHSC-CCHHHHHHHHHHHTTSSSHHHHHHHHHHHHHH-TTTS-CHHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHHHHHHhccCC-CcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHH-HhcC-CcchHHHHHHHHHHHHHHhhhHHH
Confidence 35556666666555444 666666677788888887776 88999988 4432 23 344444333 36778999999
Q ss_pred HHHHHHHHHHC
Q 010790 156 AYEVEEHMGLM 166 (501)
Q Consensus 156 A~~lf~~M~~~ 166 (501)
|.+.++.+.+.
T Consensus 93 A~~~~~~lL~~ 103 (126)
T 1nzn_A 93 ALKYVRGLLQT 103 (126)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 99988888764
No 235
>1v54_E Cytochrome C oxidase polypeptide VA; oxidoreductase; HET: FME TPO HEA TGL PGV CHD CDL PEK PSC DMU; 1.80A {Bos taurus} SCOP: a.118.11.1 PDB: 1oco_E* 1occ_E* 1ocz_E* 1ocr_E* 1v55_E* 2dyr_E* 2dys_E* 2eij_E* 2eik_E* 2eil_E* 2eim_E* 2ein_E* 2occ_E* 2ybb_P* 2zxw_E* 3abk_E* 3abl_E* 3abm_E* 3ag1_E* 3ag2_E* ...
Probab=67.10 E-value=45 Score=26.39 Aligned_cols=63 Identities=13% Similarity=0.053 Sum_probs=44.6
Q ss_pred CHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 116 DGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 116 ~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
+.=+..+-++.+ -...+.|+.....+.|.+|-|..|+-.|.++|+.++.+--. ....|..++.
T Consensus 25 D~~e~rrglN~l-~~~DlVP~P~ii~aaLrAcRRvND~alAVR~lE~iK~K~~~-~~~iY~~~lq 87 (109)
T 1v54_E 25 DAWELRKGMNTL-VGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDKAGP-HKEIYPYVIQ 87 (109)
T ss_dssp CHHHHHHHHHHH-TTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHTTT-CTTHHHHHHH
T ss_pred cHHHHHHHHHHH-hccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-chhhHHHHHH
Confidence 445666667777 66777888888888888888888888888888888765221 2234655544
No 236
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=67.05 E-value=57 Score=27.49 Aligned_cols=118 Identities=10% Similarity=0.133 Sum_probs=78.7
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
.++++.++..+...+ .+..-||-+|--....-+-+-.+++++.+-+-..+.| .-..-.+|.+|++.|.
T Consensus 22 ~v~qGveii~k~~~s---sni~E~NW~ICNiiD~a~C~y~v~vLd~IGkiFDis~-C~NlKrVi~C~~~~n~-------- 89 (172)
T 1wy6_A 22 YIDEGVKIVLEITKS---STKSEYNWFICNLLESIDCRYMFQVLDKIGSYFDLDK-CQNLKSVVECGVINNT-------- 89 (172)
T ss_dssp CHHHHHHHHHHHHHH---SCHHHHTHHHHHHHHHCCHHHHHHHHHHHGGGSCGGG-CSCTHHHHHHHHHTTC--------
T ss_pred hHHHHHHHHHHHcCC---CCccccceeeeecchhhchhHHHHHHHHHhhhcCcHh-hhcHHHHHHHHHHhcc--------
Confidence 588888888887653 4566677777777777788888888888722222211 0122344455544443
Q ss_pred HHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHHHHHHHHhccCc
Q 010790 161 EHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETGKIIEDWFSGQK 221 (501)
Q Consensus 161 ~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~~~i~~~f~~~~ 221 (501)
+..-.+.-|+.++..|..|+..+++.++.. ..+|+++..-.|..++..++
T Consensus 90 ----------~se~vd~ALd~lv~~~KkDqLdki~~~~l~-n~~~~~~~l~kia~Ay~Klg 139 (172)
T 1wy6_A 90 ----------LNEHVNKALDILVIQGKRDKLEEIGREILK-NNEVSASILVAIANALRRVG 139 (172)
T ss_dssp ----------CCHHHHHHHHHHHHTTCHHHHHHHHHHHC---CCSCHHHHHHHHHHHHHTT
T ss_pred ----------hHHHHHHHHHHHHHhccHhHHHHHHHHHhc-cCCCChHHHHHHHHHHHHhc
Confidence 233455667888899999999999998533 45788898888889986654
No 237
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=65.70 E-value=91 Score=32.43 Aligned_cols=117 Identities=8% Similarity=-0.044 Sum_probs=85.4
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCC----------HHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHc
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKND----------GDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCEN 150 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~----------~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~ 150 (501)
.-++|++.++++...... +..+|+.-=..+...|+ +++|++.++.+ .... +-+..+|+.=--.+.+.
T Consensus 44 ~~eeal~~~~~~l~~nP~-~~taW~~R~~~l~~l~~~~~~~~~~~~~~~eL~~~~~~-l~~~-pK~y~aW~hR~w~l~~l 120 (567)
T 1dce_A 44 LDESVLELTSQILGANPD-FATLWNCRREVLQHLETEKSPEESAALVKAELGFLESC-LRVN-PKSYGTWHHRCWLLSRL 120 (567)
T ss_dssp CSHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH-HHHC-TTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHCch-hHHHHHHHHHHHHhcccccchhhhhhhHHHHHHHHHHH-HHhC-CCCHHHHHHHHHHHHHc
Confidence 346788888888774322 44556665555555666 89999999999 4432 12445666655566678
Q ss_pred C--CHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcC-ChHHHHHHHHHHHhC
Q 010790 151 L--EAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETG-RVEKVYQYLQKLRST 201 (501)
Q Consensus 151 g--~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g-~~~~a~~ll~~M~~~ 201 (501)
| ++++|.+.++.+.+.... +-..|+.---.+.+.| ..+++++.+.++.+.
T Consensus 121 ~~~~~~~el~~~~k~l~~d~~-N~~aW~~R~~~l~~l~~~~~~el~~~~~~I~~ 173 (567)
T 1dce_A 121 PEPNWARELELCARFLEADER-NFHCWDYRRFVAAQAAVAPAEELAFTDSLITR 173 (567)
T ss_dssp SSCCHHHHHHHHHHHHHHCTT-CHHHHHHHHHHHHHTCCCHHHHHHHHHTTTTT
T ss_pred ccccHHHHHHHHHHHHhhccc-cccHHHHHHHHHHHcCCChHHHHHHHHHHHHH
Confidence 8 779999999999987644 7888998888888888 889999998888654
No 238
>4gns_B Protein CSD3, chitin biosynthesis protein CHS6; FN3, BRCT, tetratricopeptide repeat, cargo adaptor, transpor; HET: EPE; 2.75A {Saccharomyces cerevisiae}
Probab=65.00 E-value=46 Score=36.12 Aligned_cols=128 Identities=9% Similarity=0.085 Sum_probs=76.6
Q ss_pred HHHHHHHHhcCC-HHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhC------CCC-
Q 010790 27 LINLQSCTKSKD-LTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSN------NVI- 98 (501)
Q Consensus 27 n~lI~~~~k~g~-~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~------g~~- 98 (501)
..++..+.-.++ .+.|+.+|+++....-.-+..-..++|......+ ...+ +|.++..+..+. ...
T Consensus 252 ~~Ll~~~~~t~~~~~~a~~~le~L~~~~p~~~~~~~~~~i~~~~~~~------~~Ev-~av~ll~~~l~~~~~~~~~l~~ 324 (754)
T 4gns_B 252 YSLKSFIAITPSLVDFTIDYLKGLTKKDPIHDIYYKTAMITILDHIE------TKEL-DMITILNETLDPLLSLLNDLPP 324 (754)
T ss_dssp HHHHHHHHTCGGGHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHTTCG------GGHH-HHHHHHHHHHHHHHHHHHTCSS
T ss_pred HHHHHHHcccccHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHhh------hhhH-HHHHHHHHHHHHhhhhhhhhcc
Confidence 444444545555 5889999999887543222222233343333322 0023 344444433211 111
Q ss_pred CCHH----------HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC-hhhHHHHHHHHHHcCCHHHHHHHHHHHH
Q 010790 99 PNEA----------SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPR-LRTYDPALFCFCENLEAEKAYEVEEHMG 164 (501)
Q Consensus 99 pd~~----------t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~-~~ty~~lI~~~~~~g~~~~A~~lf~~M~ 164 (501)
.+.. ....=.+.+...|+.+.|+.+-++.+. +.|+ -.||-.|..+|.+.||++.|+-.++.++
T Consensus 325 ~~~~~~~~~~~~~~LL~~Qa~FLl~K~~~elAL~~Ak~AV~---~aPseF~tW~~La~vYi~l~d~e~ALLtLNScP 398 (754)
T 4gns_B 325 RDADSARLMNCMSDLLNIQTNFLLNRGDYELALGVSNTSTE---LALDSFESWYNLARCHIKKEEYEKALFAINSMP 398 (754)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH---HCSSCHHHHHHHHHHHHHTTCHHHHHHHHHHSC
T ss_pred cccccccccCcchHHHHHHHHHHhccCcHHHHHHHHHHHHh---cCchhhHHHHHHHHHHHHhccHHHHHHHHhcCC
Confidence 1211 111223446669999999999998832 3466 5899999999999999999999998885
No 239
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=63.22 E-value=43 Score=31.87 Aligned_cols=110 Identities=10% Similarity=0.005 Sum_probs=76.5
Q ss_pred HHHHHHHHHH-HHhC--CC---H---HHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHH-----cCCHHHHHHHHHHH
Q 010790 101 EASVTSVARL-AASK--ND---G---DYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCE-----NLEAEKAYEVEEHM 163 (501)
Q Consensus 101 ~~t~~~li~~-~~~~--g~---~---~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~-----~g~~~~A~~lf~~M 163 (501)
.-.|..++.+ ++.. |. + ..|..++++. ..+.|+ -..|..+-..|.+ .|+.++|.+.|++-
T Consensus 154 ~L~W~ai~~ss~a~~~~gg~~Al~~l~~A~a~lerA---leLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferA 230 (301)
T 3u64_A 154 TLYWVGTGYVAAFALTPLGSALPDTVHAAVMMLERA---CDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHL 230 (301)
T ss_dssp HHHHHHHHHHHHHTTSCTTSCCHHHHHHHHHHHHHH---HHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCChHHHHhHHHHHHHHHHH---HHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHH
Confidence 4456665553 3332 32 3 3455555544 345576 4688889899999 49999999999998
Q ss_pred HHCCCCCCHHHHHHHHHHHHhc-CChHHHHHHHHHHHhCCCC--CCHHHHHHH
Q 010790 164 GLMGLSLEQQEIAALLKVSAET-GRVEKVYQYLQKLRSTVRC--VNEETGKII 213 (501)
Q Consensus 164 ~~~gv~pd~~t~~~Li~~~~~~-g~~~~a~~ll~~M~~~~~~--p~~~t~~~i 213 (501)
..-+-.-+..++..+-+.+++. |+.+++.+.|++-...... |+......+
T Consensus 231 L~LnP~~~id~~v~YA~~l~~~~gd~~~a~~~L~kAL~a~p~~~P~~~lan~~ 283 (301)
T 3u64_A 231 TRYCSAHDPDHHITYADALCIPLNNRAGFDEALDRALAIDPESVPHNKLLVIL 283 (301)
T ss_dssp HHHCCTTCSHHHHHHHHHTTTTTTCHHHHHHHHHHHHHCCGGGCSSCHHHHHH
T ss_pred HHhCCCCCchHHHHHHHHHHHhcCCHHHHHHHHHHHHcCCCCCCCChhHHHHH
Confidence 7753211367888888888884 9999999999998887666 766554443
No 240
>3ix7_A Uncharacterized protein TTHA0540; unknown function, thermus thermophilus HB8, structural genom 2, protein structure initiative; HET: MSE; 2.15A {Thermus thermophilus}
Probab=61.66 E-value=8.9 Score=32.04 Aligned_cols=52 Identities=29% Similarity=0.338 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCeEEeC---CCCCCCcHHHHHHHHhcCceEEeccchhhhHhhhcC
Q 010790 378 RNLVEEWNEKGVLYMT---PHGSNDDWYWLYAAVKLRCLLVTNDEMRDHIFELLG 429 (501)
Q Consensus 378 ~~~~~~~~~~~~~~~t---~~~~~DD~~~l~aa~~~~~~~vsnD~~Rdh~~~~~~ 429 (501)
.++++++++...+-+. |.++.=|--++-.|...+|.+||||..---..+..+
T Consensus 62 L~iL~~L~~~~~vei~~~~~~~~~vD~~ll~lA~~~~~~lvTnD~~L~kvA~~~G 116 (134)
T 3ix7_A 62 LETLERLREAAPLEVLETTPKGESVDEKLLFLARDLEAALVTNDHALLQMARIYG 116 (134)
T ss_dssp HHHHHHHHHHSCEEEECCCCSCSSHHHHHHHHHHHTTCEEEESCHHHHHHHHHTT
T ss_pred HHHHHHHHhcCCEEEeCCCCCcccHHHHHHHHHHHhCCEEEeCCHHHHHHHHHCC
Confidence 3567777776655444 444566899999999999999999987665554443
No 241
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=61.37 E-value=23 Score=29.60 Aligned_cols=47 Identities=15% Similarity=0.063 Sum_probs=24.7
Q ss_pred HHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 119 YAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 119 ~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
+..+-++.+ -...+.|+.....+.|.+|-+.+|+-.|.++|+..+.+
T Consensus 71 ElrrglN~l-~~~DlVPeP~Ii~AALrAcRRvNDfalAVR~lE~vK~K 117 (152)
T 2y69_E 71 ELRKGMNTL-VGYDLVPEPKIIDAALRACRRLNDFASAVRILEVVKDK 117 (152)
T ss_dssp HHHHHHHHH-TTSSBCCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-hccccCCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHh
Confidence 344444444 44455555555555555555555555555555555443
No 242
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=61.12 E-value=9.1 Score=35.01 Aligned_cols=117 Identities=9% Similarity=-0.020 Sum_probs=64.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC----HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH
Q 010790 27 LINLQSCTKSKDLTTAISLYESAHSQNLRLS----LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA 102 (501)
Q Consensus 27 n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~----~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~ 102 (501)
++.|...++.|+++....++ +.|..++ ..-++.|..++.... .++.+.+.+.|..++..
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~~~~g~t~L~~A~~~g~-------------~~~v~~Ll~~g~~~~~~ 68 (285)
T 1wdy_A 6 NHLLIKAVQNEDVDLVQQLL----EGGANVNFQEEEGGWTPLHNAVQMSR-------------EDIVELLLRHGADPVLR 68 (285)
T ss_dssp HHHHHHHHHTTCHHHHHHHH----HTTCCTTCCCTTTCCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTCC
T ss_pred chHHHHHHHcCCHHHHHHHH----HcCCCcccccCCCCCcHHHHHHHcCC-------------HHHHHHHHHcCCCCccc
Confidence 45677788889987555444 4554443 223445555665554 45666677777765432
Q ss_pred H--HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh---hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 010790 103 S--VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL---RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170 (501)
Q Consensus 103 t--~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~---~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p 170 (501)
. -.+.+...+..|+.+-+..+++ .|..++. ..+++ |...+..|+.+-... +.+.|..+
T Consensus 69 ~~~g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~-L~~A~~~~~~~~~~~----Ll~~g~~~ 131 (285)
T 1wdy_A 69 KKNGATPFLLAAIAGSVKLLKLFLS-----KGADVNECDFYGFTA-FMEAAVYGKVKALKF----LYKRGANV 131 (285)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHH-----TTCCTTCBCTTCCBH-HHHHHHTTCHHHHHH----HHHTTCCT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCccCcccCCH-HHHHHHhCCHHHHHH----HHHhCCCc
Confidence 1 1234555566777765555544 3443332 33344 444567788765444 44455444
No 243
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=59.58 E-value=7.1 Score=34.78 Aligned_cols=150 Identities=18% Similarity=0.120 Sum_probs=79.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH---HHH
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE---ASV 104 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~---~t~ 104 (501)
+.|...++.|+++....++..-...-..++..-++.|..++.... .++.+.+.+.|..++. .-+
T Consensus 8 ~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~-------------~~~v~~Ll~~g~~~~~~~~~g~ 74 (231)
T 3aji_A 8 IMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGH-------------TEIVEFLLQLGVPVNDKDDAGW 74 (231)
T ss_dssp SHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTC-------------HHHHHHHHHTTCCSCCCCTTSC
T ss_pred chHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCc-------------HHHHHHHHHhCCCCCCcCCCCC
Confidence 357778889999988888765332112234444556666766664 4566666777766543 223
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH--HHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE--IAALL 179 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t--~~~Li 179 (501)
| .+...+..|+.+-+..+++ .|..++ ..-.++ |...+..|+.+-+..++ +.|..++... -.+.+
T Consensus 75 t-~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L 143 (231)
T 3aji_A 75 S-PLHIAASAGXDEIVKALLV-----KGAHVNAVNQNGCTP-LHYAASKNRHEIAVMLL----EGGANPDAKDHYDATAM 143 (231)
T ss_dssp C-HHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCH-HHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHH
T ss_pred C-HHHHHHHcCHHHHHHHHHH-----cCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCcHH
Confidence 3 3445566777765555443 333333 233344 44455778877555444 4555443211 11233
Q ss_pred HHHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 180 KVSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 180 ~~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
...+..|..+-+ +.+.+.|..+
T Consensus 144 ~~A~~~~~~~~v----~~Ll~~g~~~ 165 (231)
T 3aji_A 144 HRAAAKGNLKMV----HILLFYKAST 165 (231)
T ss_dssp HHHHHHTCHHHH----HHHHHTTCCS
T ss_pred HHHHHcCCHHHH----HHHHhcCCCc
Confidence 334455665433 3333444444
No 244
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=59.03 E-value=38 Score=26.72 Aligned_cols=47 Identities=13% Similarity=0.099 Sum_probs=21.0
Q ss_pred HcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 149 ~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..|++++|..+.+.+. .||...|-+|-.+ +.|..+++..-+.+|...
T Consensus 52 NrG~Yq~Al~l~~~~c----~pdlepw~ALce~--rlGl~s~le~rL~~la~s 98 (116)
T 2p58_C 52 NRGDYASALQQGNKLA----YPDLEPWLALCEY--RLGLGSALESRLNRLARS 98 (116)
T ss_dssp HTTCHHHHHHHHTTSC----CGGGHHHHHHHHH--HHTCHHHHHHHHHHHTTC
T ss_pred cchhHHHHHHhcCCCC----CchHHHHHHHHHH--hcccHHHHHHHHHHHHhC
Confidence 4455555554443332 4455555444332 344444444444444333
No 245
>3eiq_C Programmed cell death protein 4; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Mus musculus}
Probab=56.58 E-value=1e+02 Score=30.11 Aligned_cols=81 Identities=12% Similarity=0.133 Sum_probs=59.2
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhCCCCCCHHHHHHHHH
Q 010790 138 RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR--VEKVYQYLQKLRSTVRCVNEETGKIIED 215 (501)
Q Consensus 138 ~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~--~~~a~~ll~~M~~~~~~p~~~t~~~i~~ 215 (501)
...+.+|.-|...||.++|.+.++++..-.+. .+....++..++-+.+. .+.+..+|..+...++.........+.+
T Consensus 218 kki~~lL~EY~~s~D~~EA~~ci~EL~~p~fh-he~V~~av~~aLE~~~~~~re~~~~LL~~L~~~glls~~q~~~Gf~~ 296 (358)
T 3eiq_C 218 KEIDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYER 296 (358)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHCCTTCH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCCHHHHHHHHHHccCCcch-HHHHHHHHHHHHccCchHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Confidence 44688999999999999999999999642222 24455666666655443 4568899999999988888877777766
Q ss_pred Hhcc
Q 010790 216 WFSG 219 (501)
Q Consensus 216 ~f~~ 219 (501)
.+..
T Consensus 297 vl~~ 300 (358)
T 3eiq_C 297 IYNE 300 (358)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 6643
No 246
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=56.33 E-value=36 Score=26.82 Aligned_cols=47 Identities=13% Similarity=-0.029 Sum_probs=21.0
Q ss_pred HcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhC
Q 010790 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 149 ~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~ 201 (501)
..|++++|..+.+.+. .||...|-+|-.+ +.|..+++..-+.+|...
T Consensus 51 NrG~Yq~Al~l~~~~c----~pdlepw~ALce~--rlGl~s~le~rL~~la~s 97 (115)
T 2uwj_G 51 NQGRYQEALAFAHGNP----WPALEPWFALCEW--HLGLGAALDRRLAGLGGS 97 (115)
T ss_dssp HTTCHHHHHGGGTTCC----CGGGHHHHHHHHH--HTTCHHHHHHHHHHHHTC
T ss_pred cchhHHHHHHhcCCCC----CchHHHHHHHHHH--hcccHHHHHHHHHHHHhC
Confidence 4445555444443332 4444455444322 344444444444444443
No 247
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=55.59 E-value=66 Score=24.51 Aligned_cols=71 Identities=8% Similarity=-0.123 Sum_probs=53.6
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHC------CCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCCCHHHH
Q 010790 138 RTYDPALFCFCENLEAEKAYEVEEHMGLM------GLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTVRCVNEETG 210 (501)
Q Consensus 138 ~ty~~lI~~~~~~g~~~~A~~lf~~M~~~------gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p~~~t~ 210 (501)
.-+-.|=..+.+.|+++.|...|+..... .-.+....+..|-.+|.+.|+.++|+.++++.... .|+....
T Consensus 6 ~dc~~lG~~~~~~~~y~~A~~W~~~Al~~~~~~~~~~~~~~~i~~~L~~~~~~~g~~~~A~~~~~~al~l--~P~~~~~ 82 (104)
T 2v5f_A 6 EDCFELGKVAYTEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL--DPEHQRA 82 (104)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH--CTTCHHH
T ss_pred HHHHHHHHHHHHccchHHHHHHHHHHHHhhhccCCCcccHHHHHHHHHHHHHHccCHHHHHHHHHHHHhc--CCCCHHH
Confidence 33445556677899999999999886553 11245678899999999999999999999988753 6665544
No 248
>2y69_E Cytochrome C oxidase subunit 5A; electron transport, complex IV, proton pumps, membrane prote; HET: TPO HEA CHD PEK PGV DMU; 1.95A {Bos taurus}
Probab=55.38 E-value=72 Score=26.65 Aligned_cols=80 Identities=13% Similarity=0.115 Sum_probs=57.5
Q ss_pred CCHhHHHH-HHHHHHhcC-CHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC
Q 010790 21 NPETNFLI-NLQSCTKSK-DLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI 98 (501)
Q Consensus 21 ~p~~~~n~-lI~~~~k~g-~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~ 98 (501)
.+++.|.+ ....+.+.. |.-+..+-++.+....+.|++....+.|.+|.+.+ ++.-|.++|+-++.. +.
T Consensus 49 Et~EeFdaRy~~~F~~~~iD~wElrrglN~l~~~DlVPeP~Ii~AALrAcRRvN--------DfalAVR~lE~vK~K-~~ 119 (152)
T 2y69_E 49 ETDEEFDARWVTYFNKPDIDAWELRKGMNTLVGYDLVPEPKIIDAALRACRRLN--------DFASAVRILEVVKDK-AG 119 (152)
T ss_dssp CCHHHHHHHHHHHHTCTTCCHHHHHHHHHHHTTSSBCCCHHHHHHHHHHHHHTT--------CHHHHHHHHHHHHHH-TT
T ss_pred CcHHHHHHHHHHHcCCcCccHHHHHHHHHHHhccccCCCcHHHHHHHHHHHHhh--------hHHHHHHHHHHHHHh-cC
Confidence 34445544 444444444 56667777777777889999999999999999998 899999999998764 22
Q ss_pred CCHHHHHHHHH
Q 010790 99 PNEASVTSVAR 109 (501)
Q Consensus 99 pd~~t~~~li~ 109 (501)
+....|.-+|.
T Consensus 120 ~~~~iY~y~lq 130 (152)
T 2y69_E 120 PHKEIYPYVIQ 130 (152)
T ss_dssp TCTTHHHHHHH
T ss_pred CchhhHHHHHH
Confidence 33446766664
No 249
>2nsz_A Programmed cell death protein 4; PDCD4, tumor suppressor, translation, antitumor protein; 1.15A {Mus musculus} SCOP: a.118.1.14 PDB: 2kzt_B 2hm8_A 2ggf_A
Probab=53.90 E-value=41 Score=27.55 Aligned_cols=24 Identities=13% Similarity=-0.006 Sum_probs=15.0
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHh
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRM 127 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M 127 (501)
.+.+|.=|...|+.++|.+.++++
T Consensus 10 i~~ll~EY~~~~D~~Ea~~cl~eL 33 (129)
T 2nsz_A 10 IDMLLKEYLLSGDISEAEHCLKEL 33 (129)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHh
Confidence 455666666666666666666666
No 250
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=53.07 E-value=71 Score=24.11 Aligned_cols=65 Identities=8% Similarity=-0.068 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHhCCC---HHHHHHHHHHhHhhcCCCCCh-hhHHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 99 PNEASVTSVARLAASKND---GDYAFVLIKRMNNEFNVVPRL-RTYDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~---~~~A~~l~~~M~~~~gi~P~~-~ty~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
.|...+..+..++...++ .++|..+|++. .. +.|+. +....+=..+.+.|++++|...|+.+...
T Consensus 4 ~~~~~~~~~a~al~~~~~~~~~~~A~~~l~~A-L~--~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~ 72 (93)
T 3bee_A 4 VTATQLAAKATTLYYLHKQAMTDEVSLLLEQA-LQ--LEPYNEAALSLIANDHFISFRFQEAIDTWVLLLDS 72 (93)
T ss_dssp CCHHHHHHHHHHHHHTTTTCCCHHHHHHHHHH-HH--HCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHhcCCCCCHHHHHHHHHH-HH--HCcCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 455566666666654444 57777777776 33 22443 44444445667777777777777777665
No 251
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=52.46 E-value=9.1 Score=33.90 Aligned_cols=138 Identities=15% Similarity=-0.031 Sum_probs=70.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH-----
Q 010790 29 NLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS----- 103 (501)
Q Consensus 29 lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t----- 103 (501)
-|...++.|+.+....+++.-.......+..-++.|..++.... .++.+.+.+.|..++...
T Consensus 5 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~~~~~~~~~~~~~~ 71 (228)
T 2dzn_A 5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQA-------------HEITSFLLSKMENVNLDDYPDDS 71 (228)
T ss_dssp HHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHTCTTCCGGGCCCTT
T ss_pred HHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCC-------------HHHHHHHHhccccccccccCCCC
Confidence 45667788998877777765332222234444555655665554 456666777774333222
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcC--CCC---ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH--HHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFN--VVP---RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ--EIA 176 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~g--i~P---~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~--t~~ 176 (501)
-.+.+...+..|+.+-+..+++ .| ..+ +..-.++ |...+..|+.+-+..+. +.|..++.. .-.
T Consensus 72 g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~ 141 (228)
T 2dzn_A 72 GWTPFHIACSVGNLEVVKSLYD-----RPLKPDLNKITNQGVTC-LHLAVGKKWFEVSQFLI----ENGASVRIKDKFNQ 141 (228)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHS-----SSSCCCTTCCCTTCCCH-HHHHHHTTCHHHHHHHH----HTTCCSCCCCTTSC
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-----CCCCcccccCCcCCCCH-HHHHHHcCCHhHHHHHH----HcCCCccccCCCCC
Confidence 1234445566777665555543 33 212 2223334 44455778876555444 445544321 112
Q ss_pred HHHHHHHhcCChH
Q 010790 177 ALLKVSAETGRVE 189 (501)
Q Consensus 177 ~Li~~~~~~g~~~ 189 (501)
+.+...+..|..+
T Consensus 142 t~L~~A~~~~~~~ 154 (228)
T 2dzn_A 142 IPLHRAASVGSLK 154 (228)
T ss_dssp CHHHHHHHTTCHH
T ss_pred CHHHHHHHcCCHH
Confidence 2333445566654
No 252
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=50.66 E-value=17 Score=30.33 Aligned_cols=19 Identities=26% Similarity=0.277 Sum_probs=9.7
Q ss_pred HHHHHHHhcCCHHHHHHHH
Q 010790 28 INLQSCTKSKDLTTAISLY 46 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf 46 (501)
+.|...++.|+.+....++
T Consensus 10 ~~l~~A~~~g~~~~v~~ll 28 (165)
T 3twr_A 10 RQLLEAAKAGDVETVKKLC 28 (165)
T ss_dssp HHHHHHHHHTCHHHHHHHC
T ss_pred HHHHHHHHhCCHHHHHHHH
Confidence 3444455556665544444
No 253
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=50.44 E-value=79 Score=23.85 Aligned_cols=66 Identities=5% Similarity=-0.073 Sum_probs=45.3
Q ss_pred ChhhHHHHHHHHHHcCC---HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHHhCC
Q 010790 136 RLRTYDPALFCFCENLE---AEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLRSTV 202 (501)
Q Consensus 136 ~~~ty~~lI~~~~~~g~---~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~ 202 (501)
+...+..+-.++...++ .++|..++++.....- -+...+..|-..+.+.|++++|+..+.++.+..
T Consensus 5 ~~~~~~~~a~al~~~~~~~~~~~A~~~l~~AL~~dp-~~~rA~~~lg~~~~~~g~y~~Ai~~w~~~l~~~ 73 (93)
T 3bee_A 5 TATQLAAKATTLYYLHKQAMTDEVSLLLEQALQLEP-YNEAALSLIANDHFISFRFQEAIDTWVLLLDSN 73 (93)
T ss_dssp CHHHHHHHHHHHHHTTTTCCCHHHHHHHHHHHHHCT-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHTCC
T ss_pred CHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHCc-CCHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhC
Confidence 44455555555544443 6888888888776532 255666677777888999999999998887653
No 254
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=47.09 E-value=10 Score=31.36 Aligned_cols=145 Identities=14% Similarity=0.006 Sum_probs=72.7
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhCCC-CCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--
Q 010790 27 LINLQSCTKSKDLTTAISLYESAHSQNL-RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS-- 103 (501)
Q Consensus 27 n~lI~~~~k~g~~~~A~~lf~~m~~~gv-~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t-- 103 (501)
.+.|...++.|+.+.+..+++. ....+ ..+..-++.|.. +..+ . .++.+.+.+.|..++...
T Consensus 3 ~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~~g~t~L~~--~~~~--------~----~~~v~~Ll~~g~~~~~~~~~ 67 (156)
T 1bd8_A 3 GDRLSGAAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQV--MMFG--------S----TAIALELLKQGASPNVQDTS 67 (156)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCCTTCCCTTSCCHHHH--SCTT--------C----HHHHHHHHHTTCCTTCCCTT
T ss_pred chHHHHHHHhCCHHHHHHHHHh-hCcCccccCCCCCcHHHH--HHcC--------C----HHHHHHHHHCCCCCCCcCCC
Confidence 3456667788999888888776 21111 123333444433 3333 3 345555666676554221
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC---ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP---RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P---~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
-.+.+...+..|+.+-+..+++ .|..+ |..-.++| ...++.|+.+-+..+++. ..-.. .|..-.+. +.
T Consensus 68 g~t~L~~A~~~~~~~~v~~Ll~-----~g~~~~~~~~~g~t~L-~~A~~~~~~~~v~~Ll~~-~~~~~-~~~~g~t~-l~ 138 (156)
T 1bd8_A 68 GTSPVHDAARTGFLDTLKVLVE-----HGADVNVPDGTGALPI-HLAVQEGHTAVVSFLAAE-SDLHR-RDARGLTP-LE 138 (156)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHH-----TTCCSCCCCTTSCCHH-HHHHHHTCHHHHHHHHTT-SCTTC-CCTTSCCH-HH
T ss_pred CCCHHHHHHHcCcHHHHHHHHH-----cCCCCCCcCCCCCcHH-HHHHHhChHHHHHHHHhc-cCCCC-cCCCCCCH-HH
Confidence 1234455566788776555543 33333 33334444 444577888777666655 11111 12222222 33
Q ss_pred HHHhcCChHHHHHHH
Q 010790 181 VSAETGRVEKVYQYL 195 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll 195 (501)
..++.|..+-+.-++
T Consensus 139 ~A~~~~~~~~v~~Ll 153 (156)
T 1bd8_A 139 LALQRGAQDLVDILQ 153 (156)
T ss_dssp HHHHSCCHHHHHHHH
T ss_pred HHHHcCcHHHHHHHH
Confidence 445667665544444
No 255
>4h7y_A Dual specificity protein kinase TTK; mitotic checkpoint kinase, chromosome instability, cancer, tetratricopeptide repeat (TPR) motif; 1.80A {Homo sapiens} PDB: 4h7x_A
Probab=46.79 E-value=27 Score=29.86 Aligned_cols=33 Identities=21% Similarity=0.164 Sum_probs=21.7
Q ss_pred hHHHHHHHHHHhcCCH------HHHHHHHHHHHhCCCCCC
Q 010790 24 TNFLINLQSCTKSKDL------TTAISLYESAHSQNLRLS 57 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~------~~A~~lf~~m~~~gv~p~ 57 (501)
.+|=..|...-+.|++ +..+++|++... .++|+
T Consensus 14 d~W~~yl~llE~~g~p~~d~~l~rlrd~YerAia-~~Pp~ 52 (161)
T 4h7y_A 14 EDWLSLLLKLEKNSVPLSDALLNKLIGRYSQAIE-ALPPD 52 (161)
T ss_dssp HHHHHHHHHHHHHTCSCCHHHHHHHHHHHHHHHH-HSCGG
T ss_pred HHHHHHHHHHHHcCCCchhhHHHHHHHHHHHHHH-cCCcc
Confidence 4555556666666888 777788887665 35554
No 256
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=46.68 E-value=39 Score=28.00 Aligned_cols=150 Identities=13% Similarity=0.057 Sum_probs=76.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHH--HHH
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASV--TSV 107 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~--~~l 107 (501)
|...++.|+++....+++.-..- -..|..-++.|..++.... .++.+.+.+.|..++.... .+.
T Consensus 7 L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~~g~t~ 72 (167)
T 3v31_A 7 VHQLAAQGEMLYLATRIEQENVI-NHTDEEGFTPLMWAAAHGQ-------------IAVVEFLLQNGADPQLLGKGRESA 72 (167)
T ss_dssp HHHHHHTTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHHHHHCCCHHHHHHHHHcCCCc-CCCCCCCCCHHHHHHHCCC-------------HHHHHHHHHcCCCCCCcCCCCCcH
Confidence 55667788887766666542111 1123334455555665553 4555666666766543211 234
Q ss_pred HHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHhc
Q 010790 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ--EIAALLKVSAET 185 (501)
Q Consensus 108 i~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~--t~~~Li~~~~~~ 185 (501)
+...+..|+.+-+..+++.- ..... +|..-+++| ...+..|+.+-+..++ +.|..++.. .-.+-+...++.
T Consensus 73 L~~A~~~~~~~~v~~Ll~~g-~~~~~-~~~~g~t~L-~~A~~~~~~~~v~~Ll----~~g~~~~~~~~~g~t~l~~A~~~ 145 (167)
T 3v31_A 73 LSLACSKGYTDIVKMLLDCG-VDVNE-YDWNGGTPL-LYAVHGNHVKCVKMLL----ESGADPTIETDSGYNSMDLAVAL 145 (167)
T ss_dssp HHHHHHHTCHHHHHHHHHHT-CCTTC-CCTTSCCHH-HHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCC-CCCCc-CCCCCCCHH-HHHHHcCCHHHHHHHH----HcCCCCCCcCCCCCCHHHHHHHc
Confidence 55556677777666555432 11111 232333444 4445678776555544 455544321 112334445566
Q ss_pred CChHHHHHHHHHHHh
Q 010790 186 GRVEKVYQYLQKLRS 200 (501)
Q Consensus 186 g~~~~a~~ll~~M~~ 200 (501)
|..+-+..+++...+
T Consensus 146 ~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 146 GYRSVQQVIESHLLK 160 (167)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 776666655555443
No 257
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=45.35 E-value=33 Score=30.23 Aligned_cols=151 Identities=14% Similarity=0.091 Sum_probs=84.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCC----CCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQN----LRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~g----v~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
+.|...++.|+.+-+..+++.-.+.. ...+..-++.|..++.... .++.+.+.+.|..++...
T Consensus 39 t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~ 105 (232)
T 2rfa_A 39 TALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN-------------VNLVRALLARGASVSARA 105 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC-------------HHHHHHHHhCCCCCCccc
Confidence 34566677788876666665422110 1112233455555665554 456666677777665421
Q ss_pred ---------------HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh--HHHHHHHHHHcCCHHHHHHHHHHHHHC
Q 010790 104 ---------------VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT--YDPALFCFCENLEAEKAYEVEEHMGLM 166 (501)
Q Consensus 104 ---------------~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t--y~~lI~~~~~~g~~~~A~~lf~~M~~~ 166 (501)
-.+.+...+..|+.+-+..+++ .|..++... -.+.|...+..|+.+.+..+++.+.+.
T Consensus 106 ~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-----~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~ 180 (232)
T 2rfa_A 106 TGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-----HGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSY 180 (232)
T ss_dssp CSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHT
T ss_pred CCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-----CCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhc
Confidence 2234555666777766555543 344343321 224455567889999988888888887
Q ss_pred CCCC---------CHHHHHHHHHHHHhcCChHHHHHHHHH
Q 010790 167 GLSL---------EQQEIAALLKVSAETGRVEKVYQYLQK 197 (501)
Q Consensus 167 gv~p---------d~~t~~~Li~~~~~~g~~~~a~~ll~~ 197 (501)
|-.+ |..-++. +...++.|+.+-+..+++.
T Consensus 181 g~~~~~~~~~~~~~~~g~tp-l~~A~~~g~~~~v~~Ll~~ 219 (232)
T 2rfa_A 181 DGGDHLKSLELVPNNQGLTP-FKLAGVEGNIVMFQHLMQK 219 (232)
T ss_dssp TCSCSSCCGGGCCCTTSCCH-HHHHHHHTCHHHHHHHHHH
T ss_pred CCchhhhhhhccCCCCCCCH-HHHHHHcCCHHHHHHHHhc
Confidence 7533 3333333 3444566776655555544
No 258
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=43.03 E-value=45 Score=28.29 Aligned_cols=65 Identities=8% Similarity=-0.028 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCC--HHHHHHHHHHHHHCCCC
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE--AEKAYEVEEHMGLMGLS 169 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~--~~~A~~lf~~M~~~gv~ 169 (501)
..+.+|.=|...|+.++|.+.++++ ....+. ..+++..+..+.=+.++ .+.+..++..+...|+.
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL-~~p~f~-~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~i 77 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKEL-EVPHFH-HELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTI 77 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHH-TCGGGH-HHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHh-CCCcch-HHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCc
Confidence 3566777777777777777777777 321111 12333344444433223 34455666666666654
No 259
>1nzn_A CGI-135 protein, fission protein FIS1P; TPR, unknown function; 2.00A {Homo sapiens} SCOP: a.118.8.1 PDB: 1iyg_A
Probab=42.93 E-value=66 Score=26.35 Aligned_cols=100 Identities=12% Similarity=0.127 Sum_probs=59.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCC-CCHHHHHHH
Q 010790 29 NLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVI-PNEASVTSV 107 (501)
Q Consensus 29 lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~-pd~~t~~~l 107 (501)
+++.-.....+..+.+-|.+....|.......|+--. ++.++. ...+..+++.+++++...+.+ -..-..=.|
T Consensus 7 ~l~~~~~~~~l~~~~~~y~~e~~~~~~s~~~~F~yAw-~Lv~S~-----~~~d~~~GI~lLe~l~~~~~p~~~Rd~lY~L 80 (126)
T 1nzn_A 7 VLNELVSVEDLLKFEKKFQSEKAAGSVSKSTQFEYAW-CLVRTR-----YNDDIRKGIVLLEELLPKGSKEEQRDYVFYL 80 (126)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHH-HHTTSS-----SHHHHHHHHHHHHHHTTTSCHHHHHHHHHHH
T ss_pred HHhccCCHHHHHHHHHHHHHHhccCCCcHHHHHHHHH-HHHcCC-----CHHHHHHHHHHHHHHHhcCCcchHHHHHHHH
Confidence 3344444455666777777766655533333444332 333433 122566699999998776421 122233346
Q ss_pred HHHHHhCCCHHHHHHHHHHhHhhcCCCCCh
Q 010790 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRL 137 (501)
Q Consensus 108 i~~~~~~g~~~~A~~l~~~M~~~~gi~P~~ 137 (501)
.-++.+.|+.+.|.+.++.+ .+ +.|+-
T Consensus 81 Avg~yklg~Y~~A~~~~~~l-L~--~eP~n 107 (126)
T 1nzn_A 81 AVGNYRLKEYEKALKYVRGL-LQ--TEPQN 107 (126)
T ss_dssp HHHHHHTTCHHHHHHHHHHH-HH--HCTTC
T ss_pred HHHHHHhhhHHHHHHHHHHH-HH--hCCCC
Confidence 66889999999999999998 33 34654
No 260
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=41.39 E-value=31 Score=33.13 Aligned_cols=149 Identities=12% Similarity=0.045 Sum_probs=83.7
Q ss_pred hHHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 24 TNFLINLQSCTKSKDLTTAISLYESAHSQNLRLS---LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 24 ~~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~---~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
..=.+.|...++.|+.+.+..++ +.|..++ ..-++.|..++..+. .++.+.+.+.|..++
T Consensus 18 ~~g~t~L~~Aa~~g~~~~v~~Ll----~~g~~~~~~d~~g~t~L~~A~~~g~-------------~~~v~~Ll~~g~~~~ 80 (364)
T 3ljn_A 18 DENMEKIHVAARKGQTDEVRRLI----ETGVSPTIQNRFGCTALHLACKFGC-------------VDTAKYLASVGEVHS 80 (364)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHH----HTTCCTTCCCTTCCCHHHHHHHHCC-------------HHHHHHHHHHCCCCC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHH----HcCCCccccCCCCCcHHHHHHHcCC-------------HHHHHHHHHCCCCcc
Confidence 34456667777888887655555 4565443 233456655666654 345555666666555
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh--------------------hhHHHHHHHHHHcC--CHHHHHH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL--------------------RTYDPALFCFCENL--EAEKAYE 158 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~--------------------~ty~~lI~~~~~~g--~~~~A~~ 158 (501)
...-.+.+...+..|+.+-+..+++.- ...|..|+. .-.++| ...+..| +.+-+..
T Consensus 81 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L-~~A~~~g~~~~~~v~~ 158 (364)
T 3ljn_A 81 LWHGQKPIHLAVMANKTDLVVALVEGA-KERGQMPESLLNECDEREVNEIGSHVKHCKGQTAL-HWCVGLGPEYLEMIKI 158 (364)
T ss_dssp CBTTBCHHHHHHHTTCHHHHHHHHHHH-HHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHH-HHHHHSCGGGHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHHhc-cccCCCHHHHHhhcchHhhhhhccccCCCCCCCHH-HHHHHcCCchHHHHHH
Confidence 423334566667889999988888876 554544433 123444 4455777 6666555
Q ss_pred HHHHHHHCCCCCCH---HHHHHHHHHHHhcCChHHHHHHHH
Q 010790 159 VEEHMGLMGLSLEQ---QEIAALLKVSAETGRVEKVYQYLQ 196 (501)
Q Consensus 159 lf~~M~~~gv~pd~---~t~~~Li~~~~~~g~~~~a~~ll~ 196 (501)
+++. |..++. .-++.| ...+..|..+-+..+++
T Consensus 159 Ll~~----ga~~~~~d~~g~t~L-~~A~~~g~~~~v~~Ll~ 194 (364)
T 3ljn_A 159 LVQL----GASPTAKDKADETPL-MRAMEFRNREALDLMMD 194 (364)
T ss_dssp HHHH----TCCTTCCCTTSCCHH-HHHHHTTCHHHHHHHHH
T ss_pred HHHc----CCCCcccCCCCCCHH-HHHHHcCCHHHHHHHHh
Confidence 5544 443332 223333 33446677654444443
No 261
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=38.12 E-value=35 Score=29.24 Aligned_cols=144 Identities=13% Similarity=0.043 Sum_probs=71.8
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHH-hCCCCCC---
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLS---LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQML-SNNVIPN--- 100 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~---~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~-~~g~~pd--- 100 (501)
+.|...++.|+.+- ++.+.+.|..++ ....+.|..++.... .+ +.+.+. ..+..++
T Consensus 41 t~L~~A~~~~~~~~----v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~---------~~----~~~~Ll~~~~~~~~~~~ 103 (201)
T 3hra_A 41 TPLNIAVHNNDIEI----AKALIDRGADINLQNSISDSPYLYAGAQGR---------TE----ILAYMLKHATPDLNKHN 103 (201)
T ss_dssp CHHHHHHHHTCHHH----HHHHHHTTCCTTCCCTTSCCHHHHHHHTTC---------HH----HHHHHHHHSCCCTTCCC
T ss_pred CHHHHHHHcCCHHH----HHHHHHcCCCCCCCCCCCCCHHHHHHHcCC---------HH----HHHHHHhccCccccccc
Confidence 34555667787654 444445565443 333455555665543 43 444444 2333322
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCC-HHHHHHHHHHHHHCCCCCCHHHH--HH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLE-AEKAYEVEEHMGLMGLSLEQQEI--AA 177 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~-~~~A~~lf~~M~~~gv~pd~~t~--~~ 177 (501)
..-. +.+...+..|+.+.+..+++.- ...--.++..-.++|..+. ..|+ ...-.++.+.+.+.|..++.... .+
T Consensus 104 ~~g~-t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~~g~t~L~~A~-~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t 180 (201)
T 3hra_A 104 RYGG-NALIPAAEKGHIDNVKLLLEDG-REDIDFQNDFGYTALIEAV-GLREGNQLYQDIVKLLMENGADQSIKDNSGRT 180 (201)
T ss_dssp TTSC-CSHHHHHHTTCHHHHHHHHHHC-CCCTTCCCTTSCCHHHHHH-HSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCCC-cHHHHHHHcCCHHHHHHHHHcC-CCCcCCCCCCCCCHHHHHH-HhccchhhHHHHHHHHHHCCCCCCccCCCCCC
Confidence 2112 3455567788887777666553 1111113444455655554 4454 33345667777777766543211 12
Q ss_pred HHHHHHhcCChHHH
Q 010790 178 LLKVSAETGRVEKV 191 (501)
Q Consensus 178 Li~~~~~~g~~~~a 191 (501)
-+...++.|..+-+
T Consensus 181 ~l~~A~~~~~~~~~ 194 (201)
T 3hra_A 181 AMDYANQKGYTEIS 194 (201)
T ss_dssp HHHHHHHHTCHHHH
T ss_pred HHHHHHHcCCHhHH
Confidence 33444455665433
No 262
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=36.10 E-value=24 Score=29.52 Aligned_cols=146 Identities=12% Similarity=0.077 Sum_probs=72.6
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--HHHH
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS--VTSV 107 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t--~~~l 107 (501)
|...++.|+++....+++.-...--..+..-++.|..++.... .++.+.+.+.|..++... -.+.
T Consensus 6 L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~~g~t~ 72 (172)
T 3v30_A 6 IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGE-------------IETVRFLLEWGADPHILAKERESA 72 (172)
T ss_dssp HHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHHTCCTTCCCTTCCCH
T ss_pred HHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCC-------------HHHHHHHHHcCCCchhhcccCCCH
Confidence 4556778888776666643211001123344555655665553 345555555565544211 1234
Q ss_pred HHHHHhCCCHHHHHHHHHHhHhhcCCCCCh---hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH--HHHHHHHH
Q 010790 108 ARLAASKNDGDYAFVLIKRMNNEFNVVPRL---RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE--IAALLKVS 182 (501)
Q Consensus 108 i~~~~~~g~~~~A~~l~~~M~~~~gi~P~~---~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t--~~~Li~~~ 182 (501)
+...+..|+.+-+..++ +.|..++. .-.++ |...+..|+.+-+..++ +.|..++... -.+-+...
T Consensus 73 L~~A~~~~~~~~v~~Ll-----~~g~~~~~~~~~g~t~-L~~A~~~~~~~~v~~Ll----~~ga~~~~~~~~g~t~l~~A 142 (172)
T 3v30_A 73 LSLASTGGYTDIVGLLL-----ERDVDINIYDWNGGTP-LLYAVRGNHVKCVEALL----ARGADLTTEADSGYTPMDLA 142 (172)
T ss_dssp HHHHHHTTCHHHHHHHH-----TTTCCTTCCCTTSCCH-HHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHH
T ss_pred HHHHHHCCCHHHHHHHH-----HcCCCCCCCCCCCCCH-HHHHHHcCCHHHHHHHH----HcCCCccccCCCCCCHHHHH
Confidence 55567778876555544 33443333 23334 44455778877655544 4555443211 11233444
Q ss_pred HhcCChHHHHHHHHHH
Q 010790 183 AETGRVEKVYQYLQKL 198 (501)
Q Consensus 183 ~~~g~~~~a~~ll~~M 198 (501)
+..|..+-+.-+++..
T Consensus 143 ~~~~~~~~~~~L~~~~ 158 (172)
T 3v30_A 143 VALGYRKVQQVIENHI 158 (172)
T ss_dssp HHHTCHHHHHHHHHHH
T ss_pred HHhCcHHHHHHHHHHH
Confidence 5566665555555444
No 263
>2zu6_B Programmed cell death protein 4; protein-protein complex, ATP-binding, helicase, hydrolase, initiation factor, nucleotide-binding; 2.80A {Homo sapiens} PDB: 3eij_A
Probab=35.93 E-value=2.9e+02 Score=26.16 Aligned_cols=79 Identities=13% Similarity=0.135 Sum_probs=54.6
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010790 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR--VEKVYQYLQKLRSTVRCVNEETGKIIEDW 216 (501)
Q Consensus 139 ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~--~~~a~~ll~~M~~~~~~p~~~t~~~i~~~ 216 (501)
..+.+|.-|...||.++|.+.++++..-... .+....++..+.-+.+. .+.+..+|..+...++.+.......+...
T Consensus 168 ki~~lL~EY~~~~D~~EA~~ci~EL~~p~f~-~e~V~~ai~~alE~~~~~~re~~~~LL~~L~~~~~ls~~q~~~Gf~~v 246 (307)
T 2zu6_B 168 EIDMLLKEYLLSGDISEAEHCLKELEVPHFH-HELVYEAIIMVLESTGESTFKMILDLLKSLWKSSTITVDQMKRGYERI 246 (307)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHCCGGGH-HHHHHHHHHHHHTCCSSHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHcCCCcch-HHHHHHHHHHHHccCChHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Confidence 3468899999999999999999998532111 23445555555554433 45678899999888887777766666555
Q ss_pred hc
Q 010790 217 FS 218 (501)
Q Consensus 217 f~ 218 (501)
+.
T Consensus 247 l~ 248 (307)
T 2zu6_B 247 YN 248 (307)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 264
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=34.76 E-value=47 Score=27.97 Aligned_cols=16 Identities=0% Similarity=-0.006 Sum_probs=7.8
Q ss_pred HHHhcCCHHHHHHHHH
Q 010790 32 SCTKSKDLTTAISLYE 47 (501)
Q Consensus 32 ~~~k~g~~~~A~~lf~ 47 (501)
..++.|+.+....+++
T Consensus 11 ~A~~~g~~~~v~~ll~ 26 (179)
T 3f6q_A 11 TQCREGNAVAVRLWLD 26 (179)
T ss_dssp HHHHHTCHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHh
Confidence 3445555555444443
No 265
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=33.97 E-value=76 Score=29.84 Aligned_cols=150 Identities=13% Similarity=-0.026 Sum_probs=75.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--H
Q 010790 30 LQSCTKSKDLTTAISLYESAHSQNLRLS---LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS--V 104 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf~~m~~~gv~p~---~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t--~ 104 (501)
|...++.|+.+-+..|++ +.|..++ ....+.++.++.... ......+.+.+.+.|..+|... -
T Consensus 172 L~~A~~~g~~~~v~~LL~---~~gad~n~~d~~g~t~l~~~~~~~~---------~~~~~~i~~lLl~~gad~n~~d~~g 239 (337)
T 4g8k_A 172 LMDAAEKGHVEVLKILLD---EMGADVNACDNMGRNALIHALLSSD---------DSDVEAITHLLLDHGADVNVRGERG 239 (337)
T ss_dssp HHHHHHHTCHHHHHHHHH---HSCCCTTCCCTTSCCHHHHHHHHSC---------TTTHHHHHHHHHHTTCCTTCCCGGG
T ss_pred HHHHHHCCCHHHHHHHHh---ccCCCcCccCCCCCcHHHHHHHHcC---------cccHHHHHHHHHHCCCCCCCcCCCC
Confidence 444566677765544443 2343332 223344444333332 1112345555677777665321 1
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCC---hhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPR---LRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKV 181 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~---~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~ 181 (501)
.+.+...+..|..+.+..++.. .|..++ ..-.++|.- .++.|..+-+. .+.+.|..++..+ . +..
T Consensus 240 ~t~L~~a~~~~~~~~v~~Ll~~----~~~~vn~~d~~G~TpL~~-A~~~g~~~iv~----~Ll~~GAd~n~~~--~-L~~ 307 (337)
T 4g8k_A 240 KTPLILAVEKKHLGLVQRLLEQ----EHIEINDTDSDGKTALLL-AVELKLKKIAE----LLCKRGASTDCGD--L-VMT 307 (337)
T ss_dssp CCHHHHHHHTTCHHHHHHHHTS----TTCCTTCBCTTSCBHHHH-HHHTTCHHHHH----HHHTTSCSSTTCC--H-HHH
T ss_pred CCHHHHHHHhhhhHHHHHHHHh----cCCcccCcCCCCCCHHHH-HHHcCCHHHHH----HHHHCCCCCCCCC--H-HHH
Confidence 2345566778888877666543 233233 223345544 45778776544 4456777666543 3 333
Q ss_pred HHhcCChHHHHHHHHHHHhCCCCCCH
Q 010790 182 SAETGRVEKVYQYLQKLRSTVRCVNE 207 (501)
Q Consensus 182 ~~~~g~~~~a~~ll~~M~~~~~~p~~ 207 (501)
.++.|+.+ +.+.+.+.|-.||.
T Consensus 308 A~~~~~~~----iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 308 ARRNYDHS----LVKVLLSHGAKEDF 329 (337)
T ss_dssp HHHTTCHH----HHHHHHHTTCCC--
T ss_pred HHHcCCHH----HHHHHHHCcCCCCC
Confidence 45566653 44555666766654
No 266
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=33.89 E-value=69 Score=25.99 Aligned_cols=115 Identities=13% Similarity=0.059 Sum_probs=60.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--
Q 010790 26 FLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS-- 103 (501)
Q Consensus 26 ~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t-- 103 (501)
+++.+...++.|+.+....+++.-. .+..+....+.|..++.... .++.+.+.+.|..++...
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~--~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~~ 66 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGA--PFTTDWLGTSPLHLAAQYGH-------------FSTTEVLLRAGVSRDARTKV 66 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTC--CCCCCTTCCCHHHHHHHHTC-------------HHHHHHHHTTTCCTTCCCTT
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCC--CCCcCCCCCCHHHHHHHcCC-------------HHHHHHHHHcCCCCCCCCCC
Confidence 3456667788888887766665421 12233344555655666654 455666667776554221
Q ss_pred HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh--HHHHHHHHHHcCCHHHHHHHH
Q 010790 104 VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT--YDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 104 ~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t--y~~lI~~~~~~g~~~~A~~lf 160 (501)
-.+.+...+..|+.+-+..++ +.|..++... -.+.+...+..|..+-+..++
T Consensus 67 g~t~L~~A~~~~~~~~v~~Ll-----~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 120 (153)
T 1awc_B 67 DRTPLHMAASEGHANIVEVLL-----KHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120 (153)
T ss_dssp CCCHHHHHHHHTCHHHHHHHH-----TTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred CCCHHHHHHHcChHHHHHHHH-----HcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence 112344445667766444443 3444444322 123344445677776544443
No 267
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=33.70 E-value=1.9e+02 Score=28.72 Aligned_cols=103 Identities=9% Similarity=-0.087 Sum_probs=70.3
Q ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhHhhcC--CCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHC-CCCCCHHHHHHHH
Q 010790 103 SVTSVARLAASKNDGDYAFVLIKRMNNEFN--VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLM-GLSLEQQEIAALL 179 (501)
Q Consensus 103 t~~~li~~~~~~g~~~~A~~l~~~M~~~~g--i~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~-gv~pd~~t~~~Li 179 (501)
+...+...|.+.|+.+.|.+.|.++ .... ..-....|-.+|..+...+|+..|.......... .-.++...-+-+-
T Consensus 133 ~~~~la~~~~~~Gd~~~A~~~~~~~-~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka~~~~~~~~d~~~~~~lk 211 (429)
T 4b4t_R 133 AWINLGEYYAQIGDKDNAEKTLGKS-LSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211 (429)
T ss_dssp CCHHHHHHHHHHCCCTTHHHHHHHH-HHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCCTHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHH-HHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhhhcCCCHHHHHHHH
Confidence 5667899999999999999999999 5432 2234467788889999999999999988887543 1122332222211
Q ss_pred H----HHHhcCChHHHHHHHHHHHhCCCCCC
Q 010790 180 K----VSAETGRVEKVYQYLQKLRSTVRCVN 206 (501)
Q Consensus 180 ~----~~~~~g~~~~a~~ll~~M~~~~~~p~ 206 (501)
. .+...+++.+|...|.+.-..-....
T Consensus 212 ~~~gl~~l~~r~f~~Aa~~f~e~~~t~~~~e 242 (429)
T 4b4t_R 212 TYYGIHCLAVRNFKEAAKLLVDSLATFTSIE 242 (429)
T ss_dssp HHHHHGGGGTSCHHHHHHHHHHHHHHSCCSC
T ss_pred HHHHHHHHHhChHHHHHHHHHHHhccCCccc
Confidence 1 12246788999888888765433333
No 268
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=32.82 E-value=2.6e+02 Score=25.28 Aligned_cols=91 Identities=10% Similarity=0.000 Sum_probs=59.7
Q ss_pred HHHHHHhCCCHHHHHHHHHHhHhhc--CCCC----ChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHH
Q 010790 107 VARLAASKNDGDYAFVLIKRMNNEF--NVVP----RLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLK 180 (501)
Q Consensus 107 li~~~~~~g~~~~A~~l~~~M~~~~--gi~P----~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~ 180 (501)
-|..+....++++|.+++++. +.. ++++ ....-...|..-.....-.-+..+.+++ .. .++.......+.
T Consensus 24 eLDv~IA~r~feeAv~lle~~-~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l-~~--~~~~~~~r~~v~ 99 (235)
T 2d2s_A 24 EIDIELARLRFESAVETLLDI-ESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI-LS--SNEIVHLKSGTE 99 (235)
T ss_dssp HHHHHHHTTCHHHHHHHHHHH-HHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH-HT--CSSHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHH-HHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH-Hh--cCCHHHHHHHHH
Confidence 467888899999999999877 431 2321 1122233344444434444455566666 33 556777888889
Q ss_pred HHHhcCChHHHHHHHHHHHhC
Q 010790 181 VSAETGRVEKVYQYLQKLRST 201 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~M~~~ 201 (501)
.+.+-|+.++|.++|-+.+..
T Consensus 100 ~L~rLg~~~~A~~lfL~~rs~ 120 (235)
T 2d2s_A 100 NMIKLGLPEQALDLFLQNRSN 120 (235)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHCCChhHHHHHHHHHHHH
Confidence 999999999999999877543
No 269
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=32.78 E-value=30 Score=31.33 Aligned_cols=105 Identities=10% Similarity=0.036 Sum_probs=55.3
Q ss_pred HHHHHHHHhCCCCCCHHH------------HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCC---ChhhHHHHHHHHHHc
Q 010790 86 FRVFDQMLSNNVIPNEAS------------VTSVARLAASKNDGDYAFVLIKRMNNEFNVVP---RLRTYDPALFCFCEN 150 (501)
Q Consensus 86 ~~lf~~M~~~g~~pd~~t------------~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P---~~~ty~~lI~~~~~~ 150 (501)
.++.+.+.+.|..++... -.+.+...+..|+.+.+..+++.. |..+ +..-.+++..+ +..
T Consensus 118 ~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~----~~~~~~~~~~g~t~l~~a-~~~ 192 (285)
T 1wdy_A 118 VKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEM----GADVNACDNMGRNALIHA-LLS 192 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTS----CCCTTCCCTTSCCHHHHH-HHC
T ss_pred HHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhc----CCCCCccCCCCCCHHHHH-HHc
Confidence 345666666666554320 113455566678877666666543 2222 33334444444 456
Q ss_pred CCHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHhcCChHHHHHHH
Q 010790 151 LEAEKAYEVEEHMGLMGLSLEQQ--EIAALLKVSAETGRVEKVYQYL 195 (501)
Q Consensus 151 g~~~~A~~lf~~M~~~gv~pd~~--t~~~Li~~~~~~g~~~~a~~ll 195 (501)
|......++.+.+.+.|..++.. .-.+.+...++.|..+-+..++
T Consensus 193 ~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll 239 (285)
T 1wdy_A 193 SDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLL 239 (285)
T ss_dssp SCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred cccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHH
Confidence 66555566777777777655432 1223344445666655443333
No 270
>2ion_A PDCD4, programmed cell death 4, PDCD4; alpha-helical, antitumor protein; 1.57A {Mus musculus} SCOP: a.118.1.14 PDB: 2ios_A 2iol_A
Probab=32.17 E-value=2.2e+02 Score=23.79 Aligned_cols=79 Identities=13% Similarity=0.121 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCC--hHHHHHHHHHHHhCCCCCCHHHHHHHHHH
Q 010790 139 TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGR--VEKVYQYLQKLRSTVRCVNEETGKIIEDW 216 (501)
Q Consensus 139 ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~--~~~a~~ll~~M~~~~~~p~~~t~~~i~~~ 216 (501)
..+.+|.-|...||+++|.+.++++..-.+ .......++..++-+.+. .+.+..+|..+...++.+.......+...
T Consensus 11 ki~~lL~EY~~~~D~~EA~~cl~EL~~p~f-~~e~V~~~i~~alE~~~~~~re~~~~LL~~L~~~~~is~~q~~~Gf~~v 89 (152)
T 2ion_A 11 EIDMLLKEYLLSGDISEAEHCLKELEVPHF-HHELVYEAIVMVLESTGESAFKMILDLLKSLWKSSTITIDQMKRGYERI 89 (152)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHTCGGG-HHHHHHHHHHHHHHCCSSHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHhCCCcc-hHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHCCCcCHHHHHHHHHHH
Confidence 457889999999999999999999853211 134455666666655432 45688899999888887777766665555
Q ss_pred hc
Q 010790 217 FS 218 (501)
Q Consensus 217 f~ 218 (501)
+.
T Consensus 90 l~ 91 (152)
T 2ion_A 90 YN 91 (152)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 271
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=31.65 E-value=45 Score=29.29 Aligned_cols=152 Identities=13% Similarity=-0.022 Sum_probs=79.9
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCC---CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCC-----
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRL---SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIP----- 99 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p---~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~p----- 99 (501)
+.|...++.|+.+....+++. .|..+ |..-++.|..++.... .+-+. .+.+.|..+
T Consensus 5 t~L~~A~~~g~~~~v~~Ll~~---~g~~~~~~~~~g~t~L~~A~~~g~---------~~~v~----~Ll~~~~~~~~~~~ 68 (232)
T 2rfa_A 5 SPLLLAAKENDVQALSKLLKF---EGCEVHQRGAMGETALHIAALYDN---------LEAAM----VLMEAAPELVFEPM 68 (232)
T ss_dssp CHHHHHHHTTCHHHHHHHHTT---TCSCTTCCCTTSCCHHHHHHHTTC---------HHHHH----HHHHHCGGGGGCCC
T ss_pred CHHHHHHHcCCHHHHHHHHHh---cCCCcccCCCCCCCHHHHHHHcCC---------HHHHH----HHHHcCchhccccc
Confidence 345666788887765555532 24333 3334555555665543 44333 344433321
Q ss_pred ---CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh---------------hHHHHHHHHHHcCCHHHHHHHHH
Q 010790 100 ---NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR---------------TYDPALFCFCENLEAEKAYEVEE 161 (501)
Q Consensus 100 ---d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~---------------ty~~lI~~~~~~g~~~~A~~lf~ 161 (501)
|..-. +.+...+..|+.+-+..+++. |..++.. .-.+.|...+..|+.+-+..++
T Consensus 69 ~~~~~~g~-t~L~~A~~~~~~~~v~~Ll~~-----g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll- 141 (232)
T 2rfa_A 69 TSELYEGQ-TALHIAVINQNVNLVRALLAR-----GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLI- 141 (232)
T ss_dssp CSTTTTTC-CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHH-
T ss_pred cccCCCCc-CHHHHHHHcCCHHHHHHHHhC-----CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHH-
Confidence 11222 345555677887766655543 3333332 1233445556778776555544
Q ss_pred HHHHCCCCCCHH--HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 162 HMGLMGLSLEQQ--EIAALLKVSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 162 ~M~~~gv~pd~~--t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
+.|..++.. .-.+-+...+..|..+-+..+++.+.+.|..+
T Consensus 142 ---~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 142 ---EHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp ---HTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred ---HCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 455544321 12233445567788887777777777776544
No 272
>1v96_A Hypothetical protein PH0500; rossmann fold, tRNA synthetase, nucleotide binding protein, structural genomics; 1.75A {Pyrococcus horikoshii} SCOP: c.120.1.1 PDB: 1ye5_A 1y82_A
Probab=30.90 E-value=26 Score=29.03 Aligned_cols=43 Identities=23% Similarity=0.160 Sum_probs=28.9
Q ss_pred CCCCcHHHHHHHHhcCceEEeccc--hhhh---HhhhcCchhHHHhhh
Q 010790 396 GSNDDWYWLYAAVKLRCLLVTNDE--MRDH---IFELLGSNFFLKWKE 438 (501)
Q Consensus 396 ~~~DD~~~l~aa~~~~~~~vsnD~--~Rdh---~~~~~~~~~f~rW~~ 438 (501)
.+..|.++.-.|+..++.+||+|. |+.- ....+++..|.++.+
T Consensus 94 ~~~~D~lIaA~A~~~~~~lvT~D~kdf~~i~~~~i~~i~~~efl~~~~ 141 (149)
T 1v96_A 94 LDMEDIITATTAIYTNSLLVTDDPKRYEPIRRFGLDTMPLDKFIKEVE 141 (149)
T ss_dssp CCHHHHHHHHHHHHHTCEEEESCHHHHGGGGGGTCCEEEHHHHHHHHH
T ss_pred CCHhHHHHHHHHHHcCCEEEECCHHHHhhhhhCCeeecCHHHHHHHHH
Confidence 355788888888999999999993 4321 122334567777653
No 273
>4b4t_R RPN7, 26S proteasome regulatory subunit RPN7; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=29.35 E-value=2.3e+02 Score=28.02 Aligned_cols=98 Identities=14% Similarity=0.011 Sum_probs=65.1
Q ss_pred CChhhHHHHHHHHHHHHhCC--CCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhc---CCCCCh----hhHHHHHHHH
Q 010790 77 SKDSALRHGFRVFDQMLSNN--VIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEF---NVVPRL----RTYDPALFCF 147 (501)
Q Consensus 77 ~k~~~~~~a~~lf~~M~~~g--~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~---gi~P~~----~ty~~lI~~~ 147 (501)
.++|+++.|.+.|.++.... ..--...+-.+|+.+...+++..|...++.. +.. +-.|+. ..|..++ +
T Consensus 142 ~~~Gd~~~A~~~~~~~~~~~~~~~~kid~~l~~irl~l~~~d~~~~~~~~~ka-~~~~~~~~d~~~~~~lk~~~gl~--~ 218 (429)
T 4b4t_R 142 AQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAV-NSMIEKGGDWERRNRYKTYYGIH--C 218 (429)
T ss_dssp HHHCCCTTHHHHHHHHHHHHTCCCSHHHHHHHHHHHHHHHTCHHHHHHHHHHH-HHHHTTCCCTHHHHHHHHHHHHG--G
T ss_pred HHcCCHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHhccHHHHHHHHHHH-HHhhhcCCCHHHHHHHHHHHHHH--H
Confidence 35678999999999998743 3333567788999999999999999999887 432 222222 2233333 2
Q ss_pred HHcCCHHHHHHHHHHHHHCCCCCCHHHHHH
Q 010790 148 CENLEAEKAYEVEEHMGLMGLSLEQQEIAA 177 (501)
Q Consensus 148 ~~~g~~~~A~~lf~~M~~~gv~pd~~t~~~ 177 (501)
...+++..|...|-+....--..+..++..
T Consensus 219 l~~r~f~~Aa~~f~e~~~t~~~~e~~~~~~ 248 (429)
T 4b4t_R 219 LAVRNFKEAAKLLVDSLATFTSIELTSYES 248 (429)
T ss_dssp GGTSCHHHHHHHHHHHHHHSCCSCHHHHHH
T ss_pred HHhChHHHHHHHHHHHhccCCccchhhHHH
Confidence 357889999988877655433334444433
No 274
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=29.10 E-value=8.8 Score=34.93 Aligned_cols=120 Identities=12% Similarity=-0.053 Sum_probs=64.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCC-------HHHHHHHHHHHHh--CCCCCCCChhhHHHHHHHHHHHHhCCCC
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLS-------LHHFNALLYLCSD--SATDPSSKDSALRHGFRVFDQMLSNNVI 98 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~-------~~ty~~LL~~c~~--~~~~~~~k~~~~~~a~~lf~~M~~~g~~ 98 (501)
+.|...++.|+.+....+++.+.+.|..++ ..-.+.|..++.. .+ ..+-+..+++.-...+..
T Consensus 4 t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g--------~~~~v~~Ll~~g~~~~~~ 75 (256)
T 2etb_A 4 DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDG--------VNACIMPLLQIDKDSGNP 75 (256)
T ss_dssp HHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTT--------BCTTHHHHHHHHHHTTCS
T ss_pred cHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccc--------hHHHHHHHHhcCCcccch
Confidence 456677888999988888888777776544 3445666666655 12 233344444433222110
Q ss_pred ----------CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh---------------HHHHHHHHHHcCCH
Q 010790 99 ----------PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT---------------YDPALFCFCENLEA 153 (501)
Q Consensus 99 ----------pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t---------------y~~lI~~~~~~g~~ 153 (501)
.|..-. +.+...+..|+.+-+..+++. |..++... -.+.|...+..|+.
T Consensus 76 ~~~~~~~~~~~d~~g~-t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~ 149 (256)
T 2etb_A 76 KPLVNAQCTDEFYQGH-SALHIAIEKRSLQCVKLLVEN-----GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQW 149 (256)
T ss_dssp SCGGGCCCCSTTTTTC-CHHHHHHHTTCHHHHHHHHHT-----TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCH
T ss_pred hhhcccccccccccCC-CHHHHHHHcCCHHHHHHHHHc-----CCCCCcccccccccccccccccCCCCHHHHHHHcCCH
Confidence 111222 344555677887766655443 43344332 22344445577877
Q ss_pred HHHHHHHH
Q 010790 154 EKAYEVEE 161 (501)
Q Consensus 154 ~~A~~lf~ 161 (501)
+-+..+++
T Consensus 150 ~~v~~Ll~ 157 (256)
T 2etb_A 150 DVVTYLLE 157 (256)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 65554443
No 275
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=28.91 E-value=68 Score=26.62 Aligned_cols=120 Identities=13% Similarity=0.032 Sum_probs=63.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCH
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLS---LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNE 101 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~---~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~ 101 (501)
.-.+.+...++.|+.+.+..+++ .|..++ ...++.|..++.... .++.+.+.+.|..++.
T Consensus 13 ~~~~~l~~A~~~g~~~~v~~Ll~----~g~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~ 75 (169)
T 2y1l_E 13 DLGKKLLEAARAGRDDEVRILMA----NGADVNAEDASGWTPLHLAAFNGH-------------LEIVEVLLKNGADVNA 75 (169)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHH----TTCCTTCCCTTSCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTC
T ss_pred cccchHHHHHHcCCHHHHHHHHH----CCCCCCCCCCCCCCHHHHHHHcCC-------------HHHHHHHHHcCCCCCc
Confidence 34556677778888876655554 454332 333455555665554 4455666666665432
Q ss_pred HH--HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh--HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC
Q 010790 102 AS--VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT--YDPALFCFCENLEAEKAYEVEEHMGLMGLSL 170 (501)
Q Consensus 102 ~t--~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t--y~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p 170 (501)
.. -.+.+...+..|+.+-+..+++ .|..++... -.+.|...++.|+.+-+..++ +.|..+
T Consensus 76 ~~~~g~t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll----~~g~~~ 139 (169)
T 2y1l_E 76 VDHAGMTPLRLAALFGHLEIVEVLLK-----NGADVNANDMEGHTPLHLAAMFGHLEIVEVLL----KNGADV 139 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHH----HTTCCT
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHH-----cCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHH----HcCCCC
Confidence 21 1234555667788765555544 333333221 223445556778776554444 455443
No 276
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=28.68 E-value=72 Score=25.33 Aligned_cols=22 Identities=9% Similarity=0.024 Sum_probs=11.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHH
Q 010790 25 NFLINLQSCTKSKDLTTAISLY 46 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf 46 (501)
.-.+.+...++.|+.+....+.
T Consensus 13 ~~~t~l~~A~~~g~~~~v~~Ll 34 (136)
T 2jab_A 13 DLGKKLLEAARAGQDDEVRILM 34 (136)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHH
T ss_pred cccHHHHHHHHhCCHHHHHHHH
Confidence 3445555556666665444333
No 277
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=28.22 E-value=1.3e+02 Score=27.57 Aligned_cols=144 Identities=8% Similarity=0.016 Sum_probs=73.7
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHH-HHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH--H
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSLH-HFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS--V 104 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~-ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t--~ 104 (501)
+.|...++.|+.+-+..++ +.|..++.. -++.|..++.... .++.+.+.+.|..++... -
T Consensus 33 t~L~~A~~~g~~~~v~~Ll----~~g~~~~~~~g~t~L~~A~~~g~-------------~~~v~~Ll~~ga~~~~~d~~g 95 (285)
T 3kea_A 33 SASYYAIADNNVRLVCTLL----NAGALKNLLENEFPLHQAATLED-------------TKIVKILLFSGLDDSQFDDKG 95 (285)
T ss_dssp CHHHHHHHTTCHHHHHHHH----HTTGGGSCCTTCCHHHHHTTSSS-------------CHHHHHHHHTTCCTTCCCTTS
T ss_pred CHHHHHHHcCCHHHHHHHH----hCCCCCCCCCCCCHHHHHHHcCC-------------HHHHHHHHHCCCCCCCcCCCC
Confidence 3456667778876555444 445433322 2334444444432 345555666676654321 1
Q ss_pred HHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh---hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCC-CHHHHHHHHH
Q 010790 105 TSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL---RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSL-EQQEIAALLK 180 (501)
Q Consensus 105 ~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~---~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~p-d~~t~~~Li~ 180 (501)
.+.+...+..|+.+-+..+++. |..++. .-+.+.|...+..|..+-+..++ +.|..+ +...-.+.+.
T Consensus 96 ~t~L~~A~~~g~~~~v~~Ll~~-----ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll----~~g~~~~~~~~g~t~L~ 166 (285)
T 3kea_A 96 NTALYYAVDSGNMQTVKLFVKK-----NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFL----SEIPSTFDLAILLSCIH 166 (285)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHH-----CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHH----TTSCTTCCCSTHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHhc-----CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH----hCCCccccccCCccHHH
Confidence 2344555677887766666554 332333 23245566666788876555444 444332 2212234444
Q ss_pred HHHhcCChHHHHHHHHH
Q 010790 181 VSAETGRVEKVYQYLQK 197 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~ 197 (501)
..+..|..+-+..+++.
T Consensus 167 ~A~~~g~~~~v~~Ll~~ 183 (285)
T 3kea_A 167 ITIKNGHVDMMILLLDY 183 (285)
T ss_dssp HHHHTTCHHHHHHHHHH
T ss_pred HHHHcChHHHHHHHHHc
Confidence 55567777655555544
No 278
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=27.35 E-value=48 Score=29.03 Aligned_cols=109 Identities=10% Similarity=0.043 Sum_probs=56.1
Q ss_pred HHHHHHHHhCCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 010790 86 FRVFDQMLSNNVIPNEAS--VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHM 163 (501)
Q Consensus 86 ~~lf~~M~~~g~~pd~~t--~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M 163 (501)
.++++.+.+.|..++... -.+.+...+..|+.+-+..+++.- .......+....+ .|...+..|+.+-+..++
T Consensus 22 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~t-~L~~A~~~~~~~~v~~Ll--- 96 (240)
T 3eu9_A 22 YERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKG-AIVDQLGGDLNST-PLHWATRQGHLSMVVQLM--- 96 (240)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTTBC-HHHHHHHHTCHHHHHHHH---
T ss_pred hHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcC-CcchhhcCCcCCC-hhHHHHHcCCHHHHHHHH---
Confidence 456666677776654321 224567778889988777666554 2221111222233 445556778876554444
Q ss_pred HHCCCCCCH---HHHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 164 GLMGLSLEQ---QEIAALLKVSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 164 ~~~gv~pd~---~t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
+.|..++. ..++. +...+..|..+ +++.+.+.|..+
T Consensus 97 -~~g~~~~~~~~~g~t~-l~~A~~~~~~~----~~~~Ll~~~~~~ 135 (240)
T 3eu9_A 97 -KYGADPSLIDGEGCSC-IHLAAQFGHTS----IVAYLIAKGQDV 135 (240)
T ss_dssp -HTTCCTTCCCTTSCCH-HHHHHHTTCHH----HHHHHHHTTCCT
T ss_pred -HcCCCCcccCCCCCCH-HHHHHHcCHHH----HHHHHHhcCCCc
Confidence 45554432 22233 34445566654 444444455444
No 279
>1ug3_A EIF4GI, eukaryotic protein synthesis initiation factor 4G; heat repeat, translation; 2.24A {Homo sapiens} SCOP: a.118.1.14 a.118.1.14
Probab=26.18 E-value=1.5e+02 Score=28.48 Aligned_cols=68 Identities=13% Similarity=0.101 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCC
Q 010790 25 NFLINLQSCTKSKDLTTAISLYESAHSQNLRLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPN 100 (501)
Q Consensus 25 ~~n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd 100 (501)
..+.+|.-|...||+++|...++++..-...+ .+....+..+.-+. ....+.+..++..+.+.|+-+.
T Consensus 13 ~~~~ll~Ey~~~~d~~Ea~~ci~el~~p~~~~-~~v~~~i~~~le~~-------~~~re~~~~Ll~~L~~~~~is~ 80 (339)
T 1ug3_A 13 KSKAIIEEYLHLNDMKEAVQCVQELASPSLLF-IFVRHGVESTLERS-------AIAREHMGQLLHQLLCAGHLST 80 (339)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHTTCCGGGHH-HHHHHHHHHHTTTC-------HHHHHHHHHHHHHHHHTTSSCH
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCcccHH-HHHHHHHHHHhCCC-------HHHHHHHHHHHHHHHHCCCCCH
Confidence 56889999999999999999998875221101 11222222222221 2245567888888877665533
No 280
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=25.45 E-value=39 Score=29.64 Aligned_cols=17 Identities=12% Similarity=0.003 Sum_probs=8.8
Q ss_pred HHHHHhcCCHHHHHHHH
Q 010790 30 LQSCTKSKDLTTAISLY 46 (501)
Q Consensus 30 I~~~~k~g~~~~A~~lf 46 (501)
|...++.|+++....++
T Consensus 13 l~~A~~~g~~~~~~~Ll 29 (240)
T 3eu9_A 13 IVKATQYGIYERCRELV 29 (240)
T ss_dssp HHHHHHTTCHHHHHHHH
T ss_pred HHHHHHcCChHHHHHHH
Confidence 34456666665444333
No 281
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=25.06 E-value=3.3e+02 Score=26.33 Aligned_cols=91 Identities=12% Similarity=0.009 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcC-CCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCC-----CCH
Q 010790 99 PNEASVTSVARLAASKNDGDYAFVLIKRMNNEFN-VVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLS-----LEQ 172 (501)
Q Consensus 99 pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~g-i~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~-----pd~ 172 (501)
+|....+ -+...+..|+.+-+..+++.- .... ...+...+++| ...+..|..+-+..+. +.|.. .|.
T Consensus 124 ~~~~~~t-pL~~Aa~~G~~eiv~~Ll~~g-ad~~~~~i~~~~~TpL-h~Aa~~G~~eiv~~Ll----~~ga~~~~~~~d~ 196 (376)
T 2aja_A 124 IQAENYQ-AFRLAAENGHLHVLNRLCELA-PTEIMAMIQAENYHAF-RLAAENGHLHVLNRLC----ELAPTEATAMIQA 196 (376)
T ss_dssp -CHHHHH-HHHHHHHTTCHHHHHHHHHSC-TTTHHHHHSHHHHHHH-HHHHHTTCHHHHHHHH----HSCGGGHHHHHHH
T ss_pred hccCCCC-HHHHHHHcCCHHHHHHHHhCC-CCccccccCCCCCCHH-HHHHHCCCHHHHHHHH----HcCCccchhccCC
Confidence 4555555 444556778877666665432 1000 11233334444 4445778877655544 44544 233
Q ss_pred HHHHHHHHHHHhcCChHHHHHHHH
Q 010790 173 QEIAALLKVSAETGRVEKVYQYLQ 196 (501)
Q Consensus 173 ~t~~~Li~~~~~~g~~~~a~~ll~ 196 (501)
.-++.|.-+.+..|..+-+.-+++
T Consensus 197 ~g~TpL~~Aa~~~G~~eiv~~Ll~ 220 (376)
T 2aja_A 197 ENYYAFRWAAVGRGHHNVINFLLD 220 (376)
T ss_dssp HHHHHHHHHHSTTCCHHHHHHHTT
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHh
Confidence 345666555437777665554444
No 282
>4fe7_A Xylose operon regulatory protein; HTH_ARAC, helix-turn-helix, PBP, periplasmic binding protein binding transcription regulator, DNA xylose; HET: XYS; 2.90A {Escherichia coli} PDB: 4fe4_A
Probab=24.60 E-value=1.3e+02 Score=29.33 Aligned_cols=83 Identities=11% Similarity=0.139 Sum_probs=44.4
Q ss_pred chhHHHHHHHHHHhcCCcceEEEecccccCCCCCCcchHHHHHHHHhcC---eEEeCCCCCCCcHHHHHHHHh-------
Q 010790 340 VPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKG---VLYMTPHGSNDDWYWLYAAVK------- 409 (501)
Q Consensus 340 ~~~i~~vv~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~t~~~~~DD~~~l~aa~~------- 409 (501)
......++++|.++++ +++.++.+..............-+.+.+.+.+ .++.++....+|+.--+.++.
T Consensus 124 ~~~g~~a~~~L~~~G~-r~I~~i~~~~~~~~~~~~~R~~Gf~~al~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 202 (412)
T 4fe7_A 124 YALVESAFLHLKEKGV-NRFAFYGLPESSGKRWATEREYAFRQLVAEEKYRGVVYQGLETAPENWQHAQNRLADWLQTLP 202 (412)
T ss_dssp HHHHHHHHHHHHHTTC-CEEEEECCCTTSCCHHHHHHHHHHHHHHTTSSSCCEEECCSCSSCSSHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCC-ceEEEecccccccccHHHHHHHHHHHHHHHcCCCccccccccccccchhhHHHHHHHHHHhCC
Confidence 4578889999999855 55555544332110000001122345555543 344444445556655554442
Q ss_pred -cCceEEeccchhhh
Q 010790 410 -LRCLLVTNDEMRDH 423 (501)
Q Consensus 410 -~~~~~vsnD~~Rdh 423 (501)
.+++|..||.+=--
T Consensus 203 ~~~aI~~~nD~~A~g 217 (412)
T 4fe7_A 203 PQTGIIAVTDARARH 217 (412)
T ss_dssp TTEEEEESSHHHHHH
T ss_pred CCeEEEEEecHHHHH
Confidence 26899999986543
No 283
>2uwj_G Type III export protein PSCG; virulence, chaperones, coiled coil, needle formation, type III secretion, bacterial pathogenicity; 2.0A {Pseudomonas aeruginosa}
Probab=24.16 E-value=2.6e+02 Score=21.96 Aligned_cols=78 Identities=9% Similarity=-0.082 Sum_probs=58.1
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
+.++|.-|-+-+...+. .+.+--+-+..+...|+.++|..+.+.+ +.||+..|-+|-.. +.|..+++..-+
T Consensus 21 ~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~-----c~pdlepw~ALce~--rlGl~s~le~rL 91 (115)
T 2uwj_G 21 CHEEALCIAEWLERLGQ--DEAARLIRISSLANQGRYQEALAFAHGN-----PWPALEPWFALCEW--HLGLGAALDRRL 91 (115)
T ss_dssp CHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHGGGTTC-----CCGGGHHHHHHHHH--HTTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCC-----CCchHHHHHHHHHH--hcccHHHHHHHH
Confidence 57889988888877655 3333233344567799999999987776 26999999887654 789888888877
Q ss_pred HHHHHCC
Q 010790 161 EHMGLMG 167 (501)
Q Consensus 161 ~~M~~~g 167 (501)
.+|..+|
T Consensus 92 ~~la~sg 98 (115)
T 2uwj_G 92 AGLGGSS 98 (115)
T ss_dssp HHHHTCS
T ss_pred HHHHhCC
Confidence 7787665
No 284
>2p58_C Putative type III secretion protein YSCG; type III secretion system, structure, needle protein, YSCE, YSCF, transport protein/chaperone complex; 1.80A {Yersinia pestis}
Probab=23.80 E-value=2.7e+02 Score=21.94 Aligned_cols=78 Identities=8% Similarity=-0.099 Sum_probs=57.7
Q ss_pred hHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHH
Q 010790 81 ALRHGFRVFDQMLSNNVIPNEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 81 ~~~~a~~lf~~M~~~g~~pd~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
+.++|.-|-+-+...+. .+.+--+-+..+...|+.++|..+.+.+ - .||+..|-+|-.. +.|..+++..-+
T Consensus 22 ~HqEA~tIAdwL~~~~~--~E~v~lIR~sSLmNrG~Yq~Al~l~~~~-c----~pdlepw~ALce~--rlGl~s~le~rL 92 (116)
T 2p58_C 22 YHEEANCIAEWLHLKGE--EEAVQLIRLSSLMNRGDYASALQQGNKL-A----YPDLEPWLALCEY--RLGLGSALESRL 92 (116)
T ss_dssp CHHHHHHHHHHHHHTTC--HHHHHHHHHHHHHHTTCHHHHHHHHTTS-C----CGGGHHHHHHHHH--HHTCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCc--HHHHHHHHHHHHHcchhHHHHHHhcCCC-C----CchHHHHHHHHHH--hcccHHHHHHHH
Confidence 57889988888887655 3333233344567799999999998777 3 6999999887654 788888888777
Q ss_pred HHHHHCC
Q 010790 161 EHMGLMG 167 (501)
Q Consensus 161 ~~M~~~g 167 (501)
.+|..+|
T Consensus 93 ~~la~sg 99 (116)
T 2p58_C 93 NRLARSQ 99 (116)
T ss_dssp HHHTTCC
T ss_pred HHHHhCC
Confidence 7776655
No 285
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=23.44 E-value=1.5e+02 Score=24.82 Aligned_cols=115 Identities=17% Similarity=0.162 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHH--HHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhh
Q 010790 62 NALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVT--SVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRT 139 (501)
Q Consensus 62 ~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~--~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~t 139 (501)
..|+.++..+. .++.+.+.+.|..||..... +.+...+..+..+....+++.- ..... +|..-
T Consensus 6 ~~L~~Aa~~G~-------------~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~g-ad~~~-~d~~g 70 (169)
T 4gpm_A 6 KRLIEAAENGN-------------KDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNA-KDSDG 70 (169)
T ss_dssp HHHHHHHHTTC-------------HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTC-CCTTS
T ss_pred HHHHHHHHcCC-------------HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcc-cchhh-hccCC
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHHHH--HHHHHHHhcCChHHHHHHHH
Q 010790 140 YDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQEIA--ALLKVSAETGRVEKVYQYLQ 196 (501)
Q Consensus 140 y~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t~~--~Li~~~~~~g~~~~a~~ll~ 196 (501)
+++|..+. ..|+.+ +.+.+.+.|..++....+ +-|-..++.|..+-+.-+++
T Consensus 71 ~TpLh~A~-~~g~~~----~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~ 124 (169)
T 4gpm_A 71 RTPLHHAA-ENGHKE----VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124 (169)
T ss_dssp CCHHHHHH-HTTCHH----HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHH-HcCCHH----HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
No 286
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=22.80 E-value=73 Score=29.76 Aligned_cols=112 Identities=12% Similarity=0.040 Sum_probs=59.6
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHhCCCCC---CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH
Q 010790 27 LINLQSCTKSKDLTTAISLYESAHSQNLRL---SLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS 103 (501)
Q Consensus 27 n~lI~~~~k~g~~~~A~~lf~~m~~~gv~p---~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t 103 (501)
.+.|...++.|+.+....++.. .+..+ |..-.+.|..++.... .++.+.+.+.|..++...
T Consensus 25 ~~~L~~A~~~g~~~~v~~ll~~---~~~~~~~~d~~g~t~L~~A~~~g~-------------~~~v~~Ll~~g~~~~~~~ 88 (351)
T 3utm_A 25 KDELLEAARSGNEEKLMALLTP---LNVNCHASDGRKSTPLHLAAGYNR-------------VRIVQLLLQHGADVHAKD 88 (351)
T ss_dssp HHHHHHHHHHTCHHHHHHHCCT---TTTTCCCSSTTCCCHHHHHHHTTC-------------HHHHHHHHHTTCCTTCCC
T ss_pred chhHHHHHHcCCHHHHHHHHHh---cCCCcccCCCCCCCHHHHHHHcCC-------------HHHHHHHHHcCCCCCccC
Confidence 4556667778888877777653 23322 2233444544555543 445566666676554321
Q ss_pred --HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCCh---hhHHHHHHHHHHcCCHHHHHHHH
Q 010790 104 --VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRL---RTYDPALFCFCENLEAEKAYEVE 160 (501)
Q Consensus 104 --~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~---~ty~~lI~~~~~~g~~~~A~~lf 160 (501)
-.+.+...+..|+.+-+..+++ .|..++. .-+++|. ..+..|+.+-+..++
T Consensus 89 ~~g~t~L~~A~~~g~~~iv~~Ll~-----~g~~~~~~~~~g~t~L~-~A~~~~~~~~v~~Ll 144 (351)
T 3utm_A 89 KGGLVPLHNACSYGHYEVTELLLK-----HGACVNAMDLWQFTPLH-EAASKNRVEVCSLLL 144 (351)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTCCCHHH-HHHHTTCHHHHHHHH
T ss_pred CCCCcHHHHHHHCCCHHHHHHHHH-----CCCCCCCCCCCCCCHHH-HHHHcCCHHHHHHHH
Confidence 1234555567787765555544 3333332 3334444 445777776555544
No 287
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=22.66 E-value=6.9e+02 Score=27.45 Aligned_cols=48 Identities=13% Similarity=-0.080 Sum_probs=22.5
Q ss_pred HcCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHhcCChHHHHHHHHHHH
Q 010790 149 ENLEAEKAYEVEEHMGLMGLSLEQQEIAALLKVSAETGRVEKVYQYLQKLR 199 (501)
Q Consensus 149 ~~g~~~~A~~lf~~M~~~gv~pd~~t~~~Li~~~~~~g~~~~a~~ll~~M~ 199 (501)
+.|+.+.-..+++...... +...=..++.+++...+.+...++|....
T Consensus 738 ~~g~~~~~~~l~~~~~~~~---~~~ek~~ll~aL~~~~d~~~l~~~L~~~l 785 (909)
T 4fke_A 738 AQGGQDQWDFAWGQLQQAQ---LVNEADKLRSALACSNEVWLLNRYLGYTL 785 (909)
T ss_dssp HHSCHHHHHHHHHHHHHCC---SHHHHHHHHHHHTTCCCHHHHHHHHHHTT
T ss_pred HhCCHHHHHHHHHHHHccC---CHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Confidence 4455444444444444321 23334455555555555555555554443
No 288
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=22.29 E-value=65 Score=28.29 Aligned_cols=151 Identities=11% Similarity=0.074 Sum_probs=74.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCCH---HHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHH-
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLSL---HHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEAS- 103 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~~---~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t- 103 (501)
+.|...++.|+.+-+ +.+.+.|..++. ..++.|..++.... .++.+.+.+.|..++...
T Consensus 13 t~L~~A~~~g~~~~v----~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-------------~~~v~~Ll~~g~~~~~~~~ 75 (237)
T 3b7b_A 13 SPLHAAAEAGHVDIC----HMLVQAGANIDTCSEDQRTPLMEAAENNH-------------LEAVKYLIKAGALVDPKDA 75 (237)
T ss_dssp CHHHHHHHHTCHHHH----HHHHHTTCCTTCCCTTCCCHHHHHHHTTC-------------HHHHHHHHTTTCCCCCCCT
T ss_pred CHHHHHHHcCcHHHH----HHHHHcCCCcCccCCCCCCHHHHHHHhCC-------------HHHHHHHHhCCCCCCCCCC
Confidence 345666778887644 444455654432 23445555665553 455666667776543221
Q ss_pred -HHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH--HHHHHHH
Q 010790 104 -VTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ--EIAALLK 180 (501)
Q Consensus 104 -~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~--t~~~Li~ 180 (501)
-.+.+...+..|+.+-+..+++.- ...--.++..-.++ |...++.|+.+-+.. +.+.|..++.. .-.+.+.
T Consensus 76 ~g~t~L~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~~g~t~-L~~A~~~~~~~~~~~----Ll~~g~~~~~~~~~g~t~L~ 149 (237)
T 3b7b_A 76 EGSTCLHLAAKKGHYEVVQYLLSNG-QMDVNCQDDGGWTP-MIWATEYKHVDLVKL----LLSKGSDINIRDNEENICLH 149 (237)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHTTT-CCCTTCCCTTSCCH-HHHHHHTTCHHHHHH----HHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCC-CCCcccCCCCCCCH-HHHHHHcCCHHHHHH----HHHCCCCCCccCCCCCCHHH
Confidence 123455566778877665555432 11000122333344 444557787765444 44455544321 1112333
Q ss_pred HHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 181 VSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 181 ~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
..+..|..+ +++.+.+.|..+
T Consensus 150 ~A~~~~~~~----~~~~Ll~~g~~~ 170 (237)
T 3b7b_A 150 WAAFSGCVD----IAEILLAAKCDL 170 (237)
T ss_dssp HHHHHCCHH----HHHHHHTTTCCT
T ss_pred HHHHCCCHH----HHHHHHHcCCCC
Confidence 344556543 444444555444
No 289
>1o4w_A PIN (PILT N-terminus) domain; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative, PS translation; 1.90A {Archaeoglobus fulgidus} SCOP: c.120.1.1
Probab=22.23 E-value=97 Score=25.62 Aligned_cols=28 Identities=36% Similarity=0.393 Sum_probs=21.9
Q ss_pred eEEeCCCCCCCcHHHHHHHHhcCceEEecc
Q 010790 389 VLYMTPHGSNDDWYWLYAAVKLRCLLVTND 418 (501)
Q Consensus 389 ~~~~t~~~~~DD~~~l~aa~~~~~~~vsnD 418 (501)
.+.-++.+ . |-+++-.|...++.+||||
T Consensus 91 ~vv~~~~~-~-D~~Ila~A~~~~~~LvT~D 118 (147)
T 1o4w_A 91 EVVETESE-G-DPSLIEAAEKYGCILITND 118 (147)
T ss_dssp EEECCSSC-S-HHHHHHHHHHHTCEEECCC
T ss_pred cEeeCCCC-c-hHHHHHHHHHhCCEEEECC
Confidence 44444533 5 8999999999999999999
No 290
>2qq8_A TBC1 domain family member 14; structural genomics consortium, RAB-GAP, SGC, GTPase activation, hydrolase activator; 2.00A {Homo sapiens}
Probab=21.93 E-value=95 Score=29.79 Aligned_cols=114 Identities=13% Similarity=0.070 Sum_probs=72.3
Q ss_pred CHHHHHHHHHHHHhCC-----CCCCHHH---HHHHHH-HHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHHHHHHHH
Q 010790 38 DLTTAISLYESAHSQN-----LRLSLHH---FNALLY-LCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEASVTSVA 108 (501)
Q Consensus 38 ~~~~A~~lf~~m~~~g-----v~p~~~t---y~~LL~-~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~t~~~li 108 (501)
+-++|+.+|..+.+.- ..++... +-..+. +.... --+++..+.+.|+.|..+++.-++
T Consensus 169 ~E~~aF~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~-------------~P~L~~hL~~~~i~~~~~~~~W~l 235 (334)
T 2qq8_A 169 DTADAFIAFSNLLNKPCQMAFFRVDHGLMLTYFAAFEVFFEEN-------------LPKLFAHFKKNNLTPDIYLIDWIF 235 (334)
T ss_dssp CHHHHHHHHHHHHTSHHHHHHHSSCCHHHHHHHHHHHHHHHHH-------------CHHHHHHHHHTTCCGGGTHHHHHH
T ss_pred CHHHHHHHHHHHHHhhhHHhccCCChHHHHHHHHHHHHHHHHH-------------CHHHHHHHHHcCCCccchHHHHHH
Confidence 5678999998876532 2333222 222222 22222 246888899999999999999999
Q ss_pred HHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHH---HHcCCHHHHHHHHHHHHH
Q 010790 109 RLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCF---CENLEAEKAYEVEEHMGL 165 (501)
Q Consensus 109 ~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~---~~~g~~~~A~~lf~~M~~ 165 (501)
..+++.=.++.+..+++.+ -..|..--.+..-++|..+ ....+.+....++..++.
T Consensus 236 tlF~~~lp~~~~lriWD~~-l~eg~~~l~~valaiL~~~~~~Ll~~d~~~il~~L~~lp~ 294 (334)
T 2qq8_A 236 TLYSKSLPLDLACRIWDVF-CRDGEEFLFRTALGILKLFEDILTKMDFIHMAQFLTRLPE 294 (334)
T ss_dssp TTTTTTSCHHHHHHHHHHH-HHHCHHHHHHHHHHHHHHTHHHHHTCCHHHHHHHHHSCCT
T ss_pred HHhcccCCHHHHHHHHHHH-HHcCCHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhCCC
Confidence 9999988999999999998 5555311111222233222 124578888877777643
No 291
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=21.86 E-value=5.1e+02 Score=29.31 Aligned_cols=112 Identities=11% Similarity=-0.016 Sum_probs=69.8
Q ss_pred HHHhcCCHHHHHHHHHHHHhCCCCC-----------------------CHHHHHHHHHHHHhCCCCCCCChhhHHHHHHH
Q 010790 32 SCTKSKDLTTAISLYESAHSQNLRL-----------------------SLHHFNALLYLCSDSATDPSSKDSALRHGFRV 88 (501)
Q Consensus 32 ~~~k~g~~~~A~~lf~~m~~~gv~p-----------------------~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~l 88 (501)
.|...|++++|...|.+.- .|+.. -..=|.-++.++.+.+ ..+.+.++
T Consensus 851 ~~L~~ge~~~A~~~F~kaa-~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~YY~hv~~LFe~~~--------~~~~vi~f 921 (1139)
T 4fhn_B 851 IYLKSKEAVKAVRCFKTTS-LVLYSHTSQFAVLREFQEIAEKYHHQNLLSCYYLHLSKKLFEES--------AYIDALEF 921 (1139)
T ss_dssp HHHHTTCHHHHHHHHHTCC-CSCTTCCCSCSSHHHHHHHHHTTTSCCSSHHHHHHHHHHHHHTS--------CCHHHHHH
T ss_pred HHHhcCCHHHHHHHHHHHh-hhhcccchhhhhhcccccccccccccccHHHHHHHHHHHHHHcC--------CHHHHHHH
Confidence 4677999999999997642 11111 0122445555666665 44445444
Q ss_pred HHHHHh-CCCCC-C--HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHHH
Q 010790 89 FDQMLS-NNVIP-N--EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAEK 155 (501)
Q Consensus 89 f~~M~~-~g~~p-d--~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~~ 155 (501)
-..-.+ .+-.. + ...|+.+.+++...|++++|...+-.+ ..... .......||...|..|.++.
T Consensus 922 a~lAi~~~~~~~~~~~~~l~~~iFk~~L~l~~ye~Ay~aL~~~-pd~~~--r~~cLr~LV~~lce~~~~~~ 989 (1139)
T 4fhn_B 922 SLLADASKETDDEDLSIAITHETLKTACAAGKFDAAHVALMVL-STTPL--KKSCLLDFVNQLTKQGKINQ 989 (1139)
T ss_dssp HHHHHHHCCSCCHHHHHHHHHHHHHHHHHHCCSGGGGHHHHHH-HHSSS--CHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHhccCCChhhHHHHHHHHHHHHHhhCCHHHHHHHHHhC-CCHHH--HHHHHHHHHHHHHhCCChhh
Confidence 332222 22221 1 225788899999999999999988888 55443 45667778888887777555
No 292
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=21.39 E-value=32 Score=30.46 Aligned_cols=136 Identities=14% Similarity=0.065 Sum_probs=62.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHhCCCCCC---HHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCC-CCCC---
Q 010790 28 INLQSCTKSKDLTTAISLYESAHSQNLRLS---LHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNN-VIPN--- 100 (501)
Q Consensus 28 ~lI~~~~k~g~~~~A~~lf~~m~~~gv~p~---~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g-~~pd--- 100 (501)
+.+...++.|+.+-+. .+.+.|..++ ....+.|..++.... .++.+.+.+.| ..++
T Consensus 46 t~L~~A~~~~~~~~v~----~Ll~~g~~~~~~~~~g~t~L~~A~~~~~-------------~~~~~~Ll~~~~~~~~~~~ 108 (237)
T 3b7b_A 46 TPLMEAAENNHLEAVK----YLIKAGALVDPKDAEGSTCLHLAAKKGH-------------YEVVQYLLSNGQMDVNCQD 108 (237)
T ss_dssp CHHHHHHHTTCHHHHH----HHHTTTCCCCCCCTTSCCHHHHHHHTTC-------------HHHHHHHHTTTCCCTTCCC
T ss_pred CHHHHHHHhCCHHHHH----HHHhCCCCCCCCCCCCCcHHHHHHHcCC-------------HHHHHHHHhCCCCCcccCC
Confidence 3455566777776444 3445554332 233445555555543 44555566655 3222
Q ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChh--hHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHHH--HH
Q 010790 101 EASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLR--TYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQE--IA 176 (501)
Q Consensus 101 ~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~--ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~t--~~ 176 (501)
..-. +.+...+..|+.+-+..+++ .|..++.. .-.+.|...++.|..+-+ +.+.+.|..++... -.
T Consensus 109 ~~g~-t~L~~A~~~~~~~~~~~Ll~-----~g~~~~~~~~~g~t~L~~A~~~~~~~~~----~~Ll~~g~~~~~~~~~g~ 178 (237)
T 3b7b_A 109 DGGW-TPMIWATEYKHVDLVKLLLS-----KGSDINIRDNEENICLHWAAFSGCVDIA----EILLAAKCDLHAVNIHGD 178 (237)
T ss_dssp TTSC-CHHHHHHHTTCHHHHHHHHH-----TTCCTTCCCTTSCCHHHHHHHHCCHHHH----HHHHTTTCCTTCCCTTCC
T ss_pred CCCC-CHHHHHHHcCCHHHHHHHHH-----CCCCCCccCCCCCCHHHHHHHCCCHHHH----HHHHHcCCCCCCcCCCCC
Confidence 2122 23444556677665544443 33333322 112334444566776544 34444554443211 12
Q ss_pred HHHHHHHhcCChHH
Q 010790 177 ALLKVSAETGRVEK 190 (501)
Q Consensus 177 ~Li~~~~~~g~~~~ 190 (501)
+-+...++.|..+-
T Consensus 179 t~L~~A~~~~~~~~ 192 (237)
T 3b7b_A 179 SPLHIAARENRYDC 192 (237)
T ss_dssp CHHHHHHHTTCHHH
T ss_pred CHHHHHHHhCCHhH
Confidence 23334445666543
No 293
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=21.29 E-value=2.9e+02 Score=24.93 Aligned_cols=67 Identities=12% Similarity=-0.011 Sum_probs=41.5
Q ss_pred CccEEEeCccccccccccCCCCcCchhHHHHHHHHHHhcCCcceEEEecccccCCCCCCcchHHHHHHHHhcCeEEeCCC
Q 010790 316 NYEAIVDGANIGLYQQNFTEGGFSVPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVLYMTPH 395 (501)
Q Consensus 316 ~~D~v~Dg~Nv~~~~~~~~~~~~~~~~i~~vv~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~ 395 (501)
.+|+|||-.+ ...+...++...+. ..|+|+.--. .+++..+.++.+.+..-++++||
T Consensus 53 ~~DVvIDFT~--------------P~a~~~~~~~~~~~---g~~~ViGTTG------~~~~~~~~l~~~a~~~~vv~apN 109 (228)
T 1vm6_A 53 SPDVVIDFSS--------------PEALPKTVDLCKKY---RAGLVLGTTA------LKEEHLQMLRELSKEVPVVQAYN 109 (228)
T ss_dssp CCSEEEECSC--------------GGGHHHHHHHHHHH---TCEEEECCCS------CCHHHHHHHHHHTTTSEEEECSC
T ss_pred CCCEEEECCC--------------HHHHHHHHHHHHHc---CCCEEEeCCC------CCHHHHHHHHHHHhhCCEEEecc
Confidence 5799999433 23455556666655 3556653211 23445567888878889999999
Q ss_pred CCCCcHHHHH
Q 010790 396 GSNDDWYWLY 405 (501)
Q Consensus 396 ~~~DD~~~l~ 405 (501)
.|--=..++.
T Consensus 110 fSlGvnll~~ 119 (228)
T 1vm6_A 110 FSIGINVLKR 119 (228)
T ss_dssp CCHHHHHHHH
T ss_pred ccHHHHHHHH
Confidence 9865443333
No 294
>3qi7_A Putative transcriptional regulator; periplasmic binding protein-like, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.86A {Clostridium difficile}
Probab=21.18 E-value=1.1e+02 Score=30.05 Aligned_cols=85 Identities=12% Similarity=0.030 Sum_probs=47.8
Q ss_pred chhHHHHHHHHHHhcCCcceEEEecccccCCCCCCcchHHHHHHHHhcCeE---EeCCCCCCCcHHHHHHH-Hh------
Q 010790 340 VPQLDAVVKKLYERSGNKWPLVILHNKRLRSLWENPSHRNLVEEWNEKGVL---YMTPHGSNDDWYWLYAA-VK------ 409 (501)
Q Consensus 340 ~~~i~~vv~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~t~~~~~DD~~~l~aa-~~------ 409 (501)
...-..++++|.+++| +++.+|...+|+........-.-+.+.+++.+.- ...|+-+.|+-|-.--. +.
T Consensus 141 ~~Ggy~A~~~Li~~Gh-k~Ia~Isgp~~~~~~~~~~R~~Gyk~Al~e~Gi~~~~~~~~d~t~e~G~~~a~~lL~~~~~~~ 219 (371)
T 3qi7_A 141 EERGKVLAERSKEMGA-KAFIHYASTDDLKDVNIAKRLEMIKETCKNIGLPFVQVNTPNINTEEDKNKVKQFLNEDIEKQ 219 (371)
T ss_dssp HHHHHHHHHHHHHTTC-SCEEEEEETTGGGSHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCC-CEEEEEeccccccchhHHHHHHHHHHHHHHcCCCceeecCCCCchHHHHHHHHHHHhccccch
Confidence 4577889999999977 6666666655543211000011233556666552 23444455555432211 11
Q ss_pred ------cCceEEeccchhhhHh
Q 010790 410 ------LRCLLVTNDEMRDHIF 425 (501)
Q Consensus 410 ------~~~~~vsnD~~Rdh~~ 425 (501)
..++|.+||.|=-=..
T Consensus 220 ~~~~~~~TAIFatND~mAiG~i 241 (371)
T 3qi7_A 220 VKKYGKDINVFGVNEYMDEVIL 241 (371)
T ss_dssp HHHHCSCCEEEESSHHHHHHHH
T ss_pred hhccCCCcEEEECCHHHHHHHH
Confidence 2799999999876543
No 295
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=20.48 E-value=1.5e+02 Score=24.37 Aligned_cols=124 Identities=18% Similarity=0.022 Sum_probs=62.2
Q ss_pred CCCHHHHHHHHHHHHhCCCCCCCChhhHHHHHHHHHHHHhCCCCCCHH--HHHHHHHHHHhCCCHHHHHHHHHHhHhhcC
Q 010790 55 RLSLHHFNALLYLCSDSATDPSSKDSALRHGFRVFDQMLSNNVIPNEA--SVTSVARLAASKNDGDYAFVLIKRMNNEFN 132 (501)
Q Consensus 55 ~p~~~ty~~LL~~c~~~~~~~~~k~~~~~~a~~lf~~M~~~g~~pd~~--t~~~li~~~~~~g~~~~A~~l~~~M~~~~g 132 (501)
.|.....+.|..++..+. .++.+.+.+.|..+|.. .-.+.+...+..|+.+.+..+++. |
T Consensus 9 ~~~~~~~~~l~~A~~~g~-------------~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----g 70 (169)
T 2y1l_E 9 HHGSDLGKKLLEAARAGR-------------DDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKN-----G 70 (169)
T ss_dssp ----CHHHHHHHHHHHTC-------------HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----T
T ss_pred cCCCcccchHHHHHHcCC-------------HHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----C
Confidence 344455666667777765 45556666667655422 112345566778887766655543 3
Q ss_pred CCCCh---hhHHHHHHHHHHcCCHHHHHHHHHHHHHCCCCCCHH--HHHHHHHHHHhcCChHHHHHHHHHHHhCCCCC
Q 010790 133 VVPRL---RTYDPALFCFCENLEAEKAYEVEEHMGLMGLSLEQQ--EIAALLKVSAETGRVEKVYQYLQKLRSTVRCV 205 (501)
Q Consensus 133 i~P~~---~ty~~lI~~~~~~g~~~~A~~lf~~M~~~gv~pd~~--t~~~Li~~~~~~g~~~~a~~ll~~M~~~~~~p 205 (501)
..++. ...++ |...+..|+.+-+..++ +.|..++.. .-.+.+...++.|+.+ +++.+.+.|..+
T Consensus 71 ~~~~~~~~~g~t~-L~~A~~~~~~~~~~~Ll----~~g~~~~~~~~~g~t~L~~A~~~~~~~----~v~~Ll~~g~~~ 139 (169)
T 2y1l_E 71 ADVNAVDHAGMTP-LRLAALFGHLEIVEVLL----KNGADVNANDMEGHTPLHLAAMFGHLE----IVEVLLKNGADV 139 (169)
T ss_dssp CCTTCCCTTSCCH-HHHHHHTTCHHHHHHHH----HTTCCTTCCCTTSCCHHHHHHHTTCHH----HHHHHHHTTCCT
T ss_pred CCCCccCCCCCCH-HHHHHHcCCHHHHHHHH----HcCCCCCCCCCCCCCHHHHHHHcCCHH----HHHHHHHcCCCC
Confidence 33332 23334 44556778876555444 455443221 1122333445566654 333444445444
No 296
>2d2s_A Exocyst complex component EXO84; tethering complex, EXO84P, endocytosis/exocytosis complex; 2.85A {Saccharomyces cerevisiae} SCOP: a.118.17.2
Probab=20.37 E-value=3e+02 Score=24.87 Aligned_cols=80 Identities=8% Similarity=0.007 Sum_probs=54.0
Q ss_pred hHHHHHHHHHHHHh--CCCCC----CHHHHHHHHHHHHhCCCHHHHHHHHHHhHhhcCCCCChhhHHHHHHHHHHcCCHH
Q 010790 81 ALRHGFRVFDQMLS--NNVIP----NEASVTSVARLAASKNDGDYAFVLIKRMNNEFNVVPRLRTYDPALFCFCENLEAE 154 (501)
Q Consensus 81 ~~~~a~~lf~~M~~--~g~~p----d~~t~~~li~~~~~~g~~~~A~~l~~~M~~~~gi~P~~~ty~~lI~~~~~~g~~~ 154 (501)
++++|.++.++..+ .+.++ +.......|+.-.....-..+..+.+++ .. .++...-...+..+.+.|+-+
T Consensus 33 ~feeAv~lle~~~~~l~~~~~~~~~~~~~~~~~l~~ki~eR~~~L~~~L~~~l-~~---~~~~~~~r~~v~~L~rLg~~~ 108 (235)
T 2d2s_A 33 RFESAVETLLDIESQLEDLSERISDEELMLLNLISLKIEQRREAISSKLSQSI-LS---SNEIVHLKSGTENMIKLGLPE 108 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHTC-------CHHHHHHHHHHHHHHHHHHHHHHHHH-HT---CSSHHHHHHHHHHHHHTTCHH
T ss_pred hHHHHHHHHHHHHHHHHhCcccccccchHHHHHHHHHHHHHHHHHHHHHHHHH-Hh---cCCHHHHHHHHHHHHHCCChh
Confidence 69999998887765 23332 1123344455555555555666676777 44 467777788889999999999
Q ss_pred HHHHHHHHHH
Q 010790 155 KAYEVEEHMG 164 (501)
Q Consensus 155 ~A~~lf~~M~ 164 (501)
.|.++|=+..
T Consensus 109 ~A~~lfL~~r 118 (235)
T 2d2s_A 109 QALDLFLQNR 118 (235)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999986654
Done!