Query 010791
Match_columns 501
No_of_seqs 179 out of 538
Neff 5.8
Searched_HMMs 46136
Date Fri Mar 29 04:36:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010791.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010791hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG4683 Uncharacterized conser 100.0 4.1E-97 9E-102 744.3 19.6 414 51-501 132-549 (549)
2 COG4299 Uncharacterized protei 100.0 1E-77 2.2E-82 586.0 26.2 360 60-501 5-371 (371)
3 PF07786 DUF1624: Protein of u 99.8 5.7E-18 1.2E-22 164.8 15.3 114 62-193 1-119 (223)
4 COG3503 Predicted membrane pro 98.8 1.7E-07 3.7E-12 94.9 16.1 116 61-193 14-134 (323)
5 COG2311 Predicted membrane pro 98.7 3.7E-06 7.9E-11 88.9 24.9 119 57-202 7-142 (394)
6 PF10129 OpgC_C: OpgC protein; 98.7 1.9E-05 4.1E-10 83.1 28.1 82 62-151 1-83 (358)
7 PF06423 GWT1: GWT1; InterPro 98.3 9.7E-06 2.1E-10 74.2 11.8 120 319-441 2-135 (136)
8 PRK10835 hypothetical protein; 98.3 0.0017 3.7E-08 68.8 30.0 77 66-154 1-93 (373)
9 PF01757 Acyl_transf_3: Acyltr 98.2 0.00035 7.5E-09 68.2 21.7 82 64-151 2-89 (340)
10 PF04235 DUF418: Protein of un 96.5 0.043 9.3E-07 51.0 12.3 93 346-440 10-107 (163)
11 PRK03854 opgC glucans biosynth 96.4 0.013 2.8E-07 61.5 8.8 90 57-153 3-101 (375)
12 COG3594 NolL Fucose 4-O-acetyl 94.7 3.7 8E-05 43.3 19.1 58 378-442 228-286 (343)
13 COG4645 Uncharacterized protei 94.5 0.12 2.6E-06 54.0 7.7 81 60-148 21-102 (410)
14 COG3274 Predicted O-acyltransf 88.4 36 0.00078 35.8 17.4 55 60-114 2-63 (332)
15 PF15345 TMEM51: Transmembrane 86.7 0.54 1.2E-05 46.7 2.9 58 356-413 9-88 (233)
16 COG5062 Uncharacterized membra 80.3 34 0.00073 36.5 12.9 111 319-432 266-379 (429)
17 COG1835 Predicted acyltransfer 49.8 33 0.00071 36.2 5.9 63 54-122 6-70 (386)
18 PRK05771 V-type ATP synthase s 41.2 76 0.0016 36.2 7.4 66 318-403 344-410 (646)
19 PF13828 DUF4190: Domain of un 32.0 98 0.0021 24.7 4.6 49 322-370 9-58 (62)
20 PF07786 DUF1624: Protein of u 31.1 1.2E+02 0.0027 29.2 6.2 19 414-432 203-221 (223)
21 COG3619 Predicted membrane pro 27.2 2.4E+02 0.0052 28.2 7.5 59 90-156 48-106 (226)
22 PF03547 Mem_trans: Membrane t 25.7 1.3E+02 0.0028 31.4 5.6 51 99-154 277-327 (385)
23 KOG3700 Predicted acyltransfer 24.4 8.2E+02 0.018 28.6 12.1 58 61-122 267-339 (705)
24 PRK03854 opgC glucans biosynth 21.9 4.7E+02 0.01 27.3 9.0 18 415-432 303-320 (375)
25 TIGR00806 rfc RFC reduced fola 21.7 4.2E+02 0.009 29.8 8.7 58 376-438 347-406 (511)
26 PF01770 Folate_carrier: Reduc 20.9 3.9E+02 0.0084 29.2 8.1 104 322-438 288-393 (412)
No 1
>KOG4683 consensus Uncharacterized conserved protein [Function unknown]
Probab=100.00 E-value=4.1e-97 Score=744.28 Aligned_cols=414 Identities=38% Similarity=0.695 Sum_probs=366.7
Q ss_pred hHhhhhccCCchhhHHHHhHHHHHHHHHHhcCcCCccccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCC
Q 010791 51 QLQQLLQQKSKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVP 130 (501)
Q Consensus 51 ~~~~~~~~~~~Rl~SLDafRGltI~lMIlVn~~G~~y~~l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~ 130 (501)
.+....+..++|+.|||+|||+||++||+||+.||.|||++||+|||+++||+||||||||||||||+|+| +..
T Consensus 132 ~~~rsla~~r~RL~SLD~FRGltValMIlVdd~GG~~p~I~HapWnG~~LADfVmPfFLfIvGVsials~K------~~s 205 (549)
T KOG4683|consen 132 GEARSLATQRKRLRSLDTFRGLTVALMILVDDGGGGYPWIEHAPWNGLHLADFVMPFFLFIVGVSIALSVK------SQS 205 (549)
T ss_pred hhhhhcCCCchhhhhhhhhcCceEEEEEEEecCCCCchhhhcCCcCCccHHHHHHHHHHHHHHhhhhhhhh------hhh
Confidence 35555667788999999999999999999999999999999999999999999999999999999999998 456
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCcccccccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCCccchh
Q 010791 131 KINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLS 210 (501)
Q Consensus 131 ~~~~~~~kil~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~d~~~~R~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~ 210 (501)
++....+|+-.|+.+|+++|+|+|++|.|+++++++++|.+.+|++|||||+|++|+++|++..++.++. +.++
T Consensus 206 ~rf~a~rKa~~R~cklllwgLflqGgf~h~~~nLTygidve~lR~mGILQr~~~ayLVvAi~~~~~~~~~--~~~~---- 279 (549)
T KOG4683|consen 206 SRFSATRKAKARICKLLLWGLFLQGGFLHSMSNLTYGIDVEQLRIMGILQRFGVAYLVVAILHTLCCRPI--SPQR---- 279 (549)
T ss_pred hhhhHhHHHHHHHHHHHHHHHHHhhhcccCcccccCCccHHHHHHHHHHHHhhHHHHHHHHHhhhccCCC--cccc----
Confidence 7778899999999999999999999999999999999999999999999999999999999998776532 1111
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhcccCCCC---ccccCCCCcceeeeeccCCCCCC-CCCCHHHHHHHHhcCcCcCCC
Q 010791 211 IFTAYQWQWIGGFIAFVIYIITTYSLYVPNWS---FSEHSDHGVKKYIVKCGMRGHLG-PACNAVGYVDRELWGINHLYS 286 (501)
Q Consensus 211 i~~~~~~~~~~~~~ll~~y~~l~~~~~vp~~~---f~~~~~~~~~~~~v~~g~~g~l~-p~~n~a~~iDr~vlg~~Hly~ 286 (501)
-||-++....+..|-+..++.+||+|. |+...|+.++.+.++||.++... |.||+++|.||+++|++|+|+
T Consensus 280 -----S~~R~V~~~~L~~~~~~~~~~~V~~~~~~~~~~~~~~~~r~~~~~~G~~~~~~~P~CnAvGy~DrqvLGi~HiY~ 354 (549)
T KOG4683|consen 280 -----SWQRAVHDVCLFSGELAVLLALVATYLGLTFGLRVPGCPRGYLGPGGKHDYNAHPKCNAVGYADRQVLGIAHIYQ 354 (549)
T ss_pred -----chhhhhhHHHHHHHHHHHHHHhhhhhhceecccccCCCCcccccCCcccccCCCCCccchhhhHHhhhhhHHHhc
Confidence 234456666666666666667777765 33333455677777888888875 569999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHH
Q 010791 287 DPVWSRLEACTLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLII 366 (501)
Q Consensus 287 ~p~~~~~~~c~~~~~~~g~~~~~~~~~~~~~fDPEGlLstl~ai~~~llG~~aG~~L~~~~~~~~~~~~l~~~G~~llil 366 (501)
.|+|||+++|+.++|++|+++.|+|+||.+|||||||||+|.|++++++|+++|+++.+.+++..|+++|...+..+.++
T Consensus 355 hP~~~r~k~cs~n~P~nG~l~~DAPSWCqapFdPEGilssi~avv~~llG~h~Ghiilh~k~~~sRir~wis~~~~l~ll 434 (549)
T KOG4683|consen 355 HPTAKRVKDCSINYPNNGPLPPDAPSWCQAPFDPEGILSSILAVVQVLLGAHAGHIILHHKNFQSRIRRWISLAILLGLL 434 (549)
T ss_pred CchHHHhhhcccCCCCCCCCCCCCchhhcCCCChHHHHHHHHHHHHHHHHhhcCeEEEEccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhhcccee
Q 010791 367 AIILHFTNAIPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFVNGWYY 446 (501)
Q Consensus 367 Glll~~~~~~PinK~LWT~Sfvl~TsG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nai~~Yv~~~~~l~~~~l~~~~~ 446 (501)
|..+++...+|+||+|||.||+|+|+|+|+++++..|+++|++.|++.+.||+++|||+|++||++ +++..+++ |||
T Consensus 435 g~tL~~~s~~Plnk~L~slsfvCVT~~~A~Li~S~mY~~iDv~EW~~~~~P~~~~GMNAi~~YV~~--~vL~~~~~-W~~ 511 (549)
T KOG4683|consen 435 GGTLCGFSAIPLNKNLWSLSFVCVTVSLALLILSLMYYFIDVREWSWSGYPFTECGMNAIVMYVGH--SVLHKMLP-WHW 511 (549)
T ss_pred hhhhhcccccchhHhHHHhhhhHHHHHHHHHHHHHHHHHhhHHHhhhccCChhhhccchhHHHHhH--HHHHHhcc-hhh
Confidence 999997668999999999999999999999999999999999999888999999999999999999 99999886 999
Q ss_pred cCCCcchHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCceEeC
Q 010791 447 KNPDNTLVNWIQNHLFIHVWNSERLGTLLYVIFAEITFWGVVAGILHRLGIYWKL 501 (501)
Q Consensus 447 ~~~~~~l~~~~~~~l~~~~~~~~~~gsll~al~~~~~~w~lia~~L~rkkIfiKl 501 (501)
+.++++. |++.-+|++- -+++|.+|+.++|+.++|||+
T Consensus 512 R~~~~~~------H~~l~~~~t~-----------~~L~W~~i~~~~~~~~~Y~~~ 549 (549)
T KOG4683|consen 512 RIGEMNT------HFMLLLEATW-----------NTLVWVGIALYLDAQEFYYSV 549 (549)
T ss_pred ccCCCce------eEEEeeehhh-----------hhhhhhhhheeeeheeeEecC
Confidence 9988775 2333334322 236899999999999999986
No 2
>COG4299 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=100.00 E-value=1e-77 Score=585.98 Aligned_cols=360 Identities=29% Similarity=0.453 Sum_probs=309.0
Q ss_pred CchhhHHHHhHHHHHHHHHHhcCcC---CccccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHH
Q 010791 60 SKRVATLDAFRGLTVVLMILVDDAG---GAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAV 136 (501)
Q Consensus 60 ~~Rl~SLDafRGltI~lMIlVn~~G---~~y~~l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~ 136 (501)
.-|+.|||+|||+||++||+|||.| +.|+|+.||+|+|||++|+|||+|||++|+|||||++|+. +.....
T Consensus 5 a~RltsLDvfRGlTv~lMilVN~ag~gd~~y~qL~HA~w~G~T~tDlVFP~FLF~vG~am~Fs~sk~~------~~n~~t 78 (371)
T COG4299 5 AFRLTSLDVFRGLTVLLMILVNNAGLGDSTYRQLSHAHWGGLTLTDLVFPWFLFCVGAAMPFSASKMN------KANVTT 78 (371)
T ss_pred hhhhhhHHHHhhhHHHHHHhhcccccccccccccccccccCCCHHHHHHHHHHHHHhhhccccccccC------ccCCcc
Confidence 3799999999999999999999987 3899999999999999999999999999999999999531 112234
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCccccCcc-cccccchhhHHHHHHHHHHHHHHHHhhcCCCCCCCCccchhhhhhh
Q 010791 137 KKIIFRTLKLLFWGIILQGGYSHAPDALSYGVD-MKHIRWCGILQRIALVYVVVALIETLTTKRRPNVLEPRHLSIFTAY 215 (501)
Q Consensus 137 ~kil~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~d-~~~~R~~GVLQRIal~Ylv~all~l~~~~~~~~~~~~~~~~i~~~~ 215 (501)
.++.||.+.+|++|.+++. |....+ +.++ .+..|.+||||||++||+++|+....+++
T Consensus 79 w~~~RRaa~~f~Lg~Lm~~-F~~~~~---ws~~~~s~tr~mGVLQrIaL~ylfAal~v~~L~~----------------- 137 (371)
T COG4299 79 WPLYRRAAERFALGYLMGA-FVTVRD---WSVTSHSLTRGMGVLQRIALAYLFAALLVRQLRG----------------- 137 (371)
T ss_pred hHHHHHHHHHHHHHHHhhh-ccccce---eeeeechhhHHHHHHHHHHHHHHHHHHHHHhcCh-----------------
Confidence 7899999999999999965 443322 2344 67899999999999999999999866654
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccCCCCccccCCCCcceeeeeccCCCCCCCCCCHHHHHHHHhcCcCcCCCCcccccccc
Q 010791 216 QWQWIGGFIAFVIYIITTYSLYVPNWSFSEHSDHGVKKYIVKCGMRGHLGPACNAVGYVDRELWGINHLYSDPVWSRLEA 295 (501)
Q Consensus 216 ~~~~~~~~~ll~~y~~l~~~~~vp~~~f~~~~~~~~~~~~v~~g~~g~l~p~~n~a~~iDr~vlg~~Hly~~p~~~~~~~ 295 (501)
++|++.+++++++||+.+...|+|+.+ ++..+|+++++|+...+.+|+|..
T Consensus 138 r~q~~laavLL~gYwl~lm~~p~P~~~---------------------l~~~Gn~g~~~d~l~i~~~hLy~~-------- 188 (371)
T COG4299 138 RWQALLAAVLLAGYWLFLMFTPHPAAP---------------------LGGIGNVGESADPLQILNDHLYSA-------- 188 (371)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCccc---------------------cccccccccccchhhhhhhhhhcc--------
Confidence 589999999999999988777877643 234569999999999999999974
Q ss_pred ccCCCCCCCCCCCCCCCCcCCCCCcchhhHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhCCC
Q 010791 296 CTLSSPNSGPLREDAPSWCRAPFEPEGLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNA 375 (501)
Q Consensus 296 c~~~~~~~g~~~~~~~~~~~~~fDPEGlLstl~ai~~~llG~~aG~~L~~~~~~~~~~~~l~~~G~~llilGlll~~~~~ 375 (501)
+ ..|||||++||+|++++++.|.++++.+++++...+....+.+.|++++++|+.|+. .
T Consensus 189 -------d------------G~~dpeGLlstvPttv~VLaGylaar~l~~~p~~~ra~l~la~~Gvvl~~~G~gW~~--~ 247 (371)
T COG4299 189 -------D------------GGFDPEGLLSTVPTTVLVLAGYLAARPLQQKPGNPRAPLLLAGLGVVLTALGYGWAG--R 247 (371)
T ss_pred -------c------------CCCCchhhhhcchHHHHHHHHHHhhhHHhhCCCCCcchHHHHHHHHHHHHhcccccc--c
Confidence 2 248999999999999999999999999998877777777899999999999999985 7
Q ss_pred CCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhh-cccee--cCCCcc
Q 010791 376 IPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFV-NGWYY--KNPDNT 452 (501)
Q Consensus 376 ~PinK~LWT~Sfvl~TsG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nai~~Yv~~~~~l~~~~l-~~~~~--~~~~~~ 452 (501)
+||||+|||+|||++|+|++.++++.|+.++|.+.-|++..||+++|.||++.||++ .++...+ .-|.. ..+..+
T Consensus 248 fPi~KkLWTssyvl~t~G~~llllaac~~l~e~~~~kr~~~pf~i~GlNalalyvls--~L~~v~l~~~~g~getaps~~ 325 (371)
T COG4299 248 FPISKKLWTSSYVLYTAGLGLLLLAACWVLAESPGGKRLLAPFTIPGLNALALYVLS--ILIKVWLLLDWGVGETAPSQS 325 (371)
T ss_pred cccchhhcCCceeehhhhHHHHHHHHHHHHHcCcccCcCcCceeecCcchhHHHHHH--HHHHHHHhhccccccccCCcc
Confidence 999999999999999999999999999999999999999999999999999999999 7776543 22221 223334
Q ss_pred hHHHHHHHHHHhhhcccchhHHHHHHHHHHHHHHHHHHHHHhcCceEeC
Q 010791 453 LVNWIQNHLFIHVWNSERLGTLLYVIFAEITFWGVVAGILHRLGIYWKL 501 (501)
Q Consensus 453 l~~~~~~~l~~~~~~~~~~gsll~al~~~~~~w~lia~~L~rkkIfiKl 501 (501)
++|++.++|.. +.+++.||++|++.+...+| +.+++|+||+|+||+
T Consensus 326 -~~w~~~n~f~s-~~g~~~Gsll~aL~yvl~~W-l~~~~MaRrg~~~Kl 371 (371)
T COG4299 326 -IAWSLLNMFRS-SFGPVGGSLLYALGYVLAVW-LGLAWMARRGIIWKL 371 (371)
T ss_pred -hhHHHHHHHHH-hcCCCCchhHHHHHHHHHHH-HHHHHHHhcceeeeC
Confidence 68999999987 57899999999999666666 589999999999997
No 3
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.
Probab=99.77 E-value=5.7e-18 Score=164.77 Aligned_cols=114 Identities=29% Similarity=0.386 Sum_probs=87.1
Q ss_pred hhhHHHHhHHHHHHHHHHhcCcCC-cc-c-ccccc--ccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHH
Q 010791 62 RVATLDAFRGLTVVLMILVDDAGG-AY-A-RIDHS--PWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAV 136 (501)
Q Consensus 62 Rl~SLDafRGltI~lMIlVn~~G~-~y-~-~l~HA--~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~ 136 (501)
|+.++|++||++|++|++||.... .+ . .-.|. .+....+.|+++|.|+|++|+|++++.+| ..++
T Consensus 1 Ri~~lD~~RGlaii~Mi~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~ap~F~fl~G~s~~l~~~~------~~~~---- 70 (223)
T PF07786_consen 1 RIPSLDALRGLAIIGMILVHFLFDLNYFGGWPQSWFGSFFWRFFRGLAAPLFLFLAGISLALSTGR------RRRR---- 70 (223)
T ss_pred CcHHHHHHHHHHHHhhhHhhCcChHhhcCccchhhHhhhHHHHHHHHHHHHHHHHHHHHHHHhccc------ccch----
Confidence 899999999999999999999753 11 1 12222 24567888999999999999999999984 2122
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCccccCcccccccchhhHHHHHHHHHHHHHHH
Q 010791 137 KKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIE 193 (501)
Q Consensus 137 ~kil~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~d~~~~R~~GVLQRIal~Ylv~all~ 193 (501)
++.+||+++|+++|+.++.... ....+...+.||||+||+|+++++.+.
T Consensus 71 ~~~~~R~~~l~~~g~~i~~~~~--------~~~~~~~i~~gIL~~ig~~~ll~~~~~ 119 (223)
T PF07786_consen 71 RKFLKRGLKLFLLGLLINLLTF--------FFFPEGFIYFGILQFIGLSMLLAALFL 119 (223)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH--------HhcCCceeehhHHHHHHHHHHHHHHHH
Confidence 7889999999999999875311 111233447799999999999888773
No 4
>COG3503 Predicted membrane protein [Function unknown]
Probab=98.79 E-value=1.7e-07 Score=94.92 Aligned_cols=116 Identities=22% Similarity=0.294 Sum_probs=82.7
Q ss_pred chhhHHHHhHHHHHHHHHHhcCcCC--cccccccccc-CCC--cchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHH
Q 010791 61 KRVATLDAFRGLTVVLMILVDDAGG--AYARIDHSPW-NGC--TLADFVMPFFLFIVGVAIALALKFILILQKVPKINGA 135 (501)
Q Consensus 61 ~Rl~SLDafRGltI~lMIlVn~~G~--~y~~l~HA~W-nG~--T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~ 135 (501)
+|+.++|++||++|++|++-+.--+ ...+++=+.= -|. .++-++-|.|+|++|+|..+|=.| +.++
T Consensus 14 ~R~~~ID~LRGla~l~MalyHf~~dl~ffg~~dl~~ta~g~~r~~ar~~A~~FlFLaG~Sl~L~~~r------~~~r--- 84 (323)
T COG3503 14 NRLGEIDILRGLALLAMALYHFFWDLEFFGYMDLATTALGLWRYFARLIASSFLFLAGVSLSLSHSR------GLRR--- 84 (323)
T ss_pred cchhhhHHHhHHHHHHHHHHHHHhhhhhcCccccchhhhhHHHHHHHHHHHHHHHHHhhHheeeccc------cccc---
Confidence 8999999999999999998764322 1122221110 111 356789999999999999998773 2221
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCCccccCcccccccchhhHHHHHHHHHHHHHHH
Q 010791 136 VKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIE 193 (501)
Q Consensus 136 ~~kil~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~d~~~~R~~GVLQRIal~Ylv~all~ 193 (501)
.++.+||.++|..+++.+... ++..-+++.-+.|||..||++-++.+.+.
T Consensus 85 ~~~l~kRgL~l~~l~l~It~~--------Twf~~P~sfI~fgILh~igLa~ll~~~fl 134 (323)
T COG3503 85 WRFLVKRGLKLAALALAITAV--------TWFAFPDSFIFFGILHAIGLASLLGAAFL 134 (323)
T ss_pred hHHHHHHHHHHHHHHHHHHHe--------eeEecCCceehHHHHHHHHHHHHHHHHHH
Confidence 778999999999999999653 11111255668899999999988766554
No 5
>COG2311 Predicted membrane protein [Function unknown]
Probab=98.74 E-value=3.7e-06 Score=88.92 Aligned_cols=119 Identities=29% Similarity=0.408 Sum_probs=78.8
Q ss_pred ccCCchhhHHHHhHHHHHHHHHHhcCcCCccc----cccccccCCCcchhH-------------HHHHHHHHHHHHHHHH
Q 010791 57 QQKSKRVATLDAFRGLTVVLMILVDDAGGAYA----RIDHSPWNGCTLADF-------------VMPFFLFIVGVAIALA 119 (501)
Q Consensus 57 ~~~~~Rl~SLDafRGltI~lMIlVn~~G~~y~----~l~HA~WnG~T~aDL-------------VFP~FLFivGvSiplS 119 (501)
..+++|+.+||++||+++.+..+||-..=.|| ..-|..| .+..|- -.|.|-|.-|+.+..=
T Consensus 7 ~~~~eRi~~LDilRG~AlLGILl~Ni~~F~~p~~~~~~~~~~~--~s~~D~~a~~~v~~f~~~KF~~lFs~LFG~G~~~~ 84 (394)
T COG2311 7 TAQRERILTLDILRGFALLGILLVNISAFGYPGAAYLNPWSGW--LSPLDAWAWALVDLFAQGKFLTLFSFLFGVGLAMM 84 (394)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHHHHHHHhCchHHHhCcCccc--CChHHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHH
Confidence 34568999999999999999999996431111 1113322 233332 2588888888888888
Q ss_pred HHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCcccccccchhhHHHHHHHHHHHHHHHHhhcCC
Q 010791 120 LKFILILQKVPKINGAVKKIIFRTLKLLFWGIILQGGYSHAPDALSYGVDMKHIRWCGILQRIALVYVVVALIETLTTKR 199 (501)
Q Consensus 120 l~~~~~~~r~~~~~~~~~kil~Rsl~Lf~lGl~l~~~~~~~~~~~~~~~d~~~~R~~GVLQRIal~Ylv~all~l~~~~~ 199 (501)
.+| +.+|+.+ -...-+||...|+++|+...-...+ .-|-+.|.+.+++.+.+.++
T Consensus 85 ~~r--~~~~g~~---~~~~~~RR~~~Lll~G~iH~~fiW~--------------------GDIL~~Ya~~g~ill~~~~~ 139 (394)
T COG2311 85 LRR--AARKGRR---WVALYARRLLLLLLLGLIHALFIWD--------------------GDILLAYALTGLILLLFRRR 139 (394)
T ss_pred HHH--HHHccCc---cHHHHHHHHHHHHHHHHHHHHHHhc--------------------chHHHHHHHHHHHHHHHHhc
Confidence 875 3334433 2334489999999999987432111 35678898889888887776
Q ss_pred CCC
Q 010791 200 RPN 202 (501)
Q Consensus 200 ~~~ 202 (501)
+++
T Consensus 140 ~~k 142 (394)
T COG2311 140 KPK 142 (394)
T ss_pred ccc
Confidence 543
No 6
>PF10129 OpgC_C: OpgC protein; InterPro: IPR014550 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=98.68 E-value=1.9e-05 Score=83.10 Aligned_cols=82 Identities=27% Similarity=0.379 Sum_probs=56.5
Q ss_pred hhhHHHHhHHHHHHHHHHhcCc-CCccccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHH
Q 010791 62 RVATLDAFRGLTVVLMILVDDA-GGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAVKKII 140 (501)
Q Consensus 62 Rl~SLDafRGltI~lMIlVn~~-G~~y~~l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~~kil 140 (501)
|...||.+||+++. ||++|.. |+.+..+.|.++.=..=| -.|.|+.|.+..++..| +.+| .+.....+|+.
T Consensus 1 Rd~riD~~RGlaL~-~Ifi~Hip~~~~~~~T~~~~GfsdaA----E~FVflSG~~~gl~Y~~--~~~~-~g~~~~~~r~~ 72 (358)
T PF10129_consen 1 RDLRIDFFRGLALV-MIFIDHIPGNVLEWFTLRNFGFSDAA----EGFVFLSGYAAGLAYGR--RFRR-RGLWAATRRLW 72 (358)
T ss_pred CchHHHHHHHHHHH-HHHHHhcCCcHHHHhccccccCCCcc----hhHhhHHHHHHHHHHhH--HHhh-cCHHHHHHHHH
Confidence 66779999999985 5566554 555555555554333333 36999999999999986 3333 35567788999
Q ss_pred HHHHHHHHHHH
Q 010791 141 FRTLKLLFWGI 151 (501)
Q Consensus 141 ~Rsl~Lf~lGl 151 (501)
||+..|..--+
T Consensus 73 ~Ra~~lY~a~i 83 (358)
T PF10129_consen 73 RRAWQLYVAHI 83 (358)
T ss_pred HHHHHHHHHHH
Confidence 99887655444
No 7
>PF06423 GWT1: GWT1; InterPro: IPR009447 Glycosylphosphatidylinositol (GPI) is a conserved post-translational modification to anchor cell surface proteins to plasma membrane in eukaryotes. GWT1 is involved in GPI anchor biosynthesis; it is required for inositol acylation in yeast [].; GO: 0016746 transferase activity, transferring acyl groups, 0006506 GPI anchor biosynthetic process, 0005789 endoplasmic reticulum membrane, 0016021 integral to membrane
Probab=98.28 E-value=9.7e-06 Score=74.18 Aligned_cols=120 Identities=19% Similarity=0.295 Sum_probs=94.7
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhhccccch---------HHHHHHHHHHHHHHHHHHHHhhCCCCCccccCCchhHHH
Q 010791 319 EPEGLLSTISAILSGTIGIHYGHVLIHFKGHS---------ARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVC 389 (501)
Q Consensus 319 DPEGlLstl~ai~~~llG~~aG~~L~~~~~~~---------~~~~~l~~~G~~llilGlll~~~~~~PinK~LWT~Sfvl 389 (501)
.-||++|.+.-++-=++|...|+.+...+... +...+++.+.+++.++-++++.. ..|+.+++.-.+||+
T Consensus 2 NrEGi~S~~GY~aIyl~g~~~G~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~vSRRlaNl~Yvl 80 (136)
T PF06423_consen 2 NREGIFSLPGYLAIYLIGVSLGRYILPPSSSSNSSSRRQWIKLLIKLLILSFIFWALYYLLNSY-IEPVSRRLANLPYVL 80 (136)
T ss_pred CcchhhhHHHHHHHHHHHHHHhhhhhCCCCCccccchhHHHHHHHHHHHHHHHHHHHHHHHHhC-CCchhHHhcchHHHH
Confidence 34999999999999999999999985543322 33456677777777777777532 689999999999999
Q ss_pred HHhHHHHHHHHHHHHHHHhcCccc-----cchhhhhcchhHHHHHHHhhhhhhhhhh
Q 010791 390 FTAGAAGIVFSALYVLMDVWELRT-----PFLFLKWIGMNAMLVFVLGAQGILAGFV 441 (501)
Q Consensus 390 ~TsG~a~l~La~~y~liDv~~~~~-----~~~pf~~~G~Nai~~Yv~~~~~l~~~~l 441 (501)
++.+.....++.++.+-++....+ ....+..+.+|.|++|+++ +++.+++
T Consensus 81 wv~a~n~~~l~~~~~i~~~~~~~~~~~~~~~~l~~aiN~N~L~~FLla--NllTGlV 135 (136)
T PF06423_consen 81 WVLAFNTFFLALYLLIELLLFRPKASYSKTPCLLDAINRNGLFVFLLA--NLLTGLV 135 (136)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccccHHHHHHcccccHHHHHH--HHHHccc
Confidence 999999999988777776665433 4567889999999999999 7776544
No 8
>PRK10835 hypothetical protein; Provisional
Probab=98.26 E-value=0.0017 Score=68.77 Aligned_cols=77 Identities=19% Similarity=0.317 Sum_probs=48.3
Q ss_pred HHHhHHHHHHHHHHhcCcCCcccc---ccccccCCCcchhHH-------------HHHHHHHHHHHHHHHHHHHHHhhhC
Q 010791 66 LDAFRGLTVVLMILVDDAGGAYAR---IDHSPWNGCTLADFV-------------MPFFLFIVGVAIALALKFILILQKV 129 (501)
Q Consensus 66 LDafRGltI~lMIlVn~~G~~y~~---l~HA~WnG~T~aDLV-------------FP~FLFivGvSiplSl~~~~~~~r~ 129 (501)
||++||+++.+..+||-+.=..+. ......++.+..|-+ +|.|-|.-|+++.+=.+| +
T Consensus 1 lD~lRGfALlGIllvNi~~f~~~~~~~~~~~~~~~~~~~d~~~~~~~~~f~~gKf~~LFs~LFG~G~~l~~~r------~ 74 (373)
T PRK10835 1 LDFVRGVAILGILLLNISAFGLPKAAYLNPAWYGAISPSDAWTWAILDLVAQVKFLTLFALLFGAGLQLLLPR------G 74 (373)
T ss_pred CcHHHHHHHHHHHHHHHHHHhCccccccCccccCCCCchHHHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHh------h
Confidence 699999999999999843111110 000001122333333 488888888888777662 2
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHh
Q 010791 130 PKINGAVKKIIFRTLKLLFWGIILQ 154 (501)
Q Consensus 130 ~~~~~~~~kil~Rsl~Lf~lGl~l~ 154 (501)
.+ .-.||...|+++|+...
T Consensus 75 ~~------~~~rRl~~Ll~~GliH~ 93 (373)
T PRK10835 75 KR------WIQSRLTLLVLLGFIHG 93 (373)
T ss_pred hH------HHHHHHHHHHHHHHHHH
Confidence 11 24489999999999874
No 9
>PF01757 Acyl_transf_3: Acyltransferase family; InterPro: IPR002656 This entry contains a range of acyltransferase enzymes as well as yet uncharacterised proteins from Caenorhabditis elegans. It also includes the protein OatA. The pathogenic bacteria, Staphylococcus aureus, is able to cause persistent infections due to its ability to resist the immune defence system. Lysozyme, a cell wall-lytic enzyme, is one of the first defence compounds induced in serum and tissues after the onset of infection. S. aureus has complete resistance to lysozyme action by O-acetylating its peptidoglycan (PG) by O-acetyltransferase (OatA) [, ]. Staphylococcus bacteria are one of the only bacterial genera that are resistant to lysozyme and tend to colonise the skin and mucosa of humans and animals []. OatA is an integral membrane protein. This entry also includes NolL proteins. NolL-dependent acetylation is specific for the fucosyl penta-N-acetylglucosamine species. In addition, the NolL protein caused elevated production of lipo-chitin oligosaccharides (LCOs). The NolL protein obtained from Rhizobium loti (Mesorhizobium loti) functions as an acetyl transferase [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups
Probab=98.20 E-value=0.00035 Score=68.21 Aligned_cols=82 Identities=20% Similarity=0.269 Sum_probs=48.0
Q ss_pred hHHHHhHHHHHHHHHHhcCcCCccc-cccccc-----cCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHH
Q 010791 64 ATLDAFRGLTVVLMILVDDAGGAYA-RIDHSP-----WNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAVK 137 (501)
Q Consensus 64 ~SLDafRGltI~lMIlVn~~G~~y~-~l~HA~-----WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~~ 137 (501)
.++|.+||++++++++.+....... .....+ +......-.-.|.|.++.|..+. ..+ ++..+..+..+
T Consensus 2 ~~iD~lR~ia~l~Vv~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~Ff~iSG~~~~-~~~-----~~~~~~~~~~~ 75 (340)
T PF01757_consen 2 YWIDGLRGIAILLVVFGHSFIFYFPPPFQGWPIFDSFSIFLFIGRFAVPLFFFISGYLLA-RSS-----KSRKSWKKFLK 75 (340)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhcccccccchhhhhHhhhhhhhhhHHHHHHHHHHHHHH-hhh-----cccccHHHHHH
Confidence 5899999999999999776542110 000000 00016778899999999999998 111 12233344444
Q ss_pred HHHHHHHHHHHHHH
Q 010791 138 KIIFRTLKLLFWGI 151 (501)
Q Consensus 138 kil~Rsl~Lf~lGl 151 (501)
|=++|.....++..
T Consensus 76 ~R~~rl~~~~~~~~ 89 (340)
T PF01757_consen 76 KRFLRLLIPYLFWS 89 (340)
T ss_pred HHHHHHhHHHHHHH
Confidence 44555544444433
No 10
>PF04235 DUF418: Protein of unknown function (DUF418); InterPro: IPR007349 Tihs is a probable integral membrane protein. It is usually found associated with (IPR007299 from INTERPRO).
Probab=96.52 E-value=0.043 Score=51.01 Aligned_cols=93 Identities=17% Similarity=0.127 Sum_probs=65.1
Q ss_pred cccchHHHHHHHHHHHHHHHHHHHHhh-----CCCCCccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhh
Q 010791 346 FKGHSARLKHWVSMGFGLLIIAIILHF-----TNAIPINKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKW 420 (501)
Q Consensus 346 ~~~~~~~~~~l~~~G~~llilGlll~~-----~~~~PinK~LWT~Sfvl~TsG~a~l~La~~y~liDv~~~~~~~~pf~~ 420 (501)
.+.+.+..++.+.+++...+...+... ....+.+....+....+.....++...+++..+.+..+.++...||..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~y~~l~~ll~~~~~~~~~~~~l~~ 89 (163)
T PF04235_consen 10 PEEHRKLLRRLLLIGLAVGLPLALLSAASWLSAWPSPPAAHLSSVLYMLGGPLLALGYVALLILLCQKRPRQRLLRPLAA 89 (163)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccHHHHHHHH
Confidence 334455556666665555433333222 112355566666677777778889999999999998888778999999
Q ss_pred cchhHHHHHHHhhhhhhhhh
Q 010791 421 IGMNAMLVFVLGAQGILAGF 440 (501)
Q Consensus 421 ~G~Nai~~Yv~~~~~l~~~~ 440 (501)
.|+-|+..|++| .++...
T Consensus 90 ~GrmaLT~Yi~q--sii~~~ 107 (163)
T PF04235_consen 90 VGRMALTNYILQ--SIIGTL 107 (163)
T ss_pred HhhHHHHHHHHH--HHHHHH
Confidence 999999999999 666533
No 11
>PRK03854 opgC glucans biosynthesis protein; Provisional
Probab=96.37 E-value=0.013 Score=61.55 Aligned_cols=90 Identities=21% Similarity=0.098 Sum_probs=58.1
Q ss_pred ccCCchhhHHHHhHHHHHHHHHHhcCcC--CccccccccccCCC--c-chh----HHHHHHHHHHHHHHHHHHHHHHHhh
Q 010791 57 QQKSKRVATLDAFRGLTVVLMILVDDAG--GAYARIDHSPWNGC--T-LAD----FVMPFFLFIVGVAIALALKFILILQ 127 (501)
Q Consensus 57 ~~~~~Rl~SLDafRGltI~lMIlVn~~G--~~y~~l~HA~WnG~--T-~aD----LVFP~FLFivGvSiplSl~~~~~~~ 127 (501)
+++++|...+|.+||+++++.|+.+..- +...|-.+...+.. + +.. .-+|.|.|+.|.....+.+|
T Consensus 3 ~~~~~R~~~lD~lR~~a~l~VV~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~mplFf~iSG~~~~~~~~~----- 77 (375)
T PRK03854 3 PVPAQREYFLDSIRAWLMLLGIPFHISLIYSSHTWHVNSAEPSLWLTLLNDFIHAFRMQVFFVISGYFSYMLFLR----- 77 (375)
T ss_pred CCccchhhhHHHHHHHHHHHHHHHHHHHHhccccccccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----
Confidence 4557899999999999999888876531 11111111111111 1 111 34899999999998888762
Q ss_pred hCCChHHHHHHHHHHHHHHHHHHHHH
Q 010791 128 KVPKINGAVKKIIFRTLKLLFWGIIL 153 (501)
Q Consensus 128 r~~~~~~~~~kil~Rsl~Lf~lGl~l 153 (501)
+ +.++..+|=++|-+.-++++.++
T Consensus 78 ~--~~~~f~~~R~~rl~iP~l~~~~~ 101 (375)
T PRK03854 78 Y--PPKRWLKVRLERVGIPMLTAIPL 101 (375)
T ss_pred c--cHHHHHHHHHHHhhHHHHHHHHH
Confidence 2 33567777788888777777554
No 12
>COG3594 NolL Fucose 4-O-acetylase and related acetyltransferases [Carbohydrate transport and metabolism]
Probab=94.67 E-value=3.7 Score=43.34 Aligned_cols=58 Identities=10% Similarity=0.150 Sum_probs=38.8
Q ss_pred ccccCCchhH-HHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhhhhhc
Q 010791 378 INKQLYSFSY-VCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILAGFVN 442 (501)
Q Consensus 378 inK~LWT~Sf-vl~TsG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nai~~Yv~~~~~l~~~~l~ 442 (501)
.++|.|..++ +...+|+++..+..+...++.. ..++++.|+|++.+|.+| +++...+.
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-----~~~~~~lG~~TL~I~~lH--g~v~~~~~ 286 (343)
T COG3594 228 SFGNIFVGGLLRALVLGLALNALVRFAAKIPQL-----RKLVTKLGKNTLYIYLLH--GFVFKVLR 286 (343)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHhccHH-----HHHHHHHhhhhHHHHHHH--HHHHHHHH
Confidence 4454444433 4455666666666666655442 368999999999999999 77765554
No 13
>COG4645 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.53 E-value=0.12 Score=54.03 Aligned_cols=81 Identities=23% Similarity=0.348 Sum_probs=52.3
Q ss_pred CchhhHHHHhHHHHHHHHHHhcC-cCCccccccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHH
Q 010791 60 SKRVATLDAFRGLTVVLMILVDD-AGGAYARIDHSPWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAVKK 138 (501)
Q Consensus 60 ~~Rl~SLDafRGltI~lMIlVn~-~G~~y~~l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~~k 138 (501)
.+|...+|+|||++.+.| ++|. +|..+..+.|-+ +.+.|- -=.|.|+.|.++..+.+| |. ....+-....|
T Consensus 21 mkRdtriDv~Ral~Lv~I-fiNHvpgt~le~itHkn---fgfsda-AEaFVliSGllvgmaYsr--Kf-~~ggrla~~lk 92 (410)
T COG4645 21 MKRDTRIDVFRALALVTI-FINHVPGTILEEITHKN---FGFSDA-AEAFVLISGLLVGMAYSR--KF-MKGGRLAGTLK 92 (410)
T ss_pred cCchhHHHHHHHHHHHHH-HHhcccHHHHHHhhccc---cccccc-chhhhhHHHHHHHHHHhh--hh-ccCcHHHHHHH
Confidence 479999999999998776 5555 555445555555 122221 136899999999999985 21 11122223347
Q ss_pred HHHHHHHHHH
Q 010791 139 IIFRTLKLLF 148 (501)
Q Consensus 139 il~Rsl~Lf~ 148 (501)
+-+|+..|..
T Consensus 93 iWrRA~~LY~ 102 (410)
T COG4645 93 IWRRAMVLYV 102 (410)
T ss_pred HHHHHHHHHH
Confidence 8888877765
No 14
>COG3274 Predicted O-acyltransferase [General function prediction only]
Probab=88.37 E-value=36 Score=35.82 Aligned_cols=55 Identities=16% Similarity=0.422 Sum_probs=38.6
Q ss_pred CchhhHHHHhHHHHHHHHHHhcCcCC-ccc-cccccc-c---CCC-cchhHHHHHHHHHHHH
Q 010791 60 SKRVATLDAFRGLTVVLMILVDDAGG-AYA-RIDHSP-W---NGC-TLADFVMPFFLFIVGV 114 (501)
Q Consensus 60 ~~Rl~SLDafRGltI~lMIlVn~~G~-~y~-~l~HA~-W---nG~-T~aDLVFP~FLFivGv 114 (501)
.+|+.++|++|+++++..|.+..... .+. -..|.. | |++ +..-.--|.|.-|.|.
T Consensus 2 ~~ri~wiD~~r~iA~f~VV~iH~~~~~~t~~~~vs~~~w~i~nvlns~sr~aVPLFfmISGy 63 (332)
T COG3274 2 QPRIVWIDLLRSIACFMVVMIHSTLWSVTEAHFVSPTLWIIANVLNSASRVAVPLFFMISGY 63 (332)
T ss_pred CcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999999988888777642 332 222221 4 555 4456678999999885
No 15
>PF15345 TMEM51: Transmembrane protein 51
Probab=86.65 E-value=0.54 Score=46.71 Aligned_cols=58 Identities=26% Similarity=0.471 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhhCCCCC----------------------ccccCCchhHHHHHhHHHHHHHHHHHHHHHhcCccc
Q 010791 356 WVSMGFGLLIIAIILHFTNAIP----------------------INKQLYSFSYVCFTAGAAGIVFSALYVLMDVWELRT 413 (501)
Q Consensus 356 l~~~G~~llilGlll~~~~~~P----------------------inK~LWT~Sfvl~TsG~a~l~La~~y~liDv~~~~~ 413 (501)
+-.+|+.|++||.++--+.++| .+++--|.-|||+-+|.++|+|++|.-+=|-++.+.
T Consensus 9 L~AiG~Gml~LGiiM~vW~~VPg~~~~~~~~~~~~n~~~~~~~~~ksKt~SVAyVLVG~Gv~LLLLSICL~IR~KRr~rq 88 (233)
T PF15345_consen 9 LTAIGVGMLALGIIMIVWNLVPGFSSGNKPTPQGSNSTEPSDGNLKSKTFSVAYVLVGSGVALLLLSICLSIRDKRRRRQ 88 (233)
T ss_pred HHHHhHhHHHHhhHheeeeecccccCCCCCCCCCCCCcCCCCCcccceeEEEEEehhhHHHHHHHHHHHHHHHHHHHHhh
Confidence 4568888999998885332333 344556788999999999999999999988776543
No 16
>COG5062 Uncharacterized membrane protein [Function unknown]
Probab=80.26 E-value=34 Score=36.49 Aligned_cols=111 Identities=18% Similarity=0.227 Sum_probs=65.0
Q ss_pred CcchhhHHHHHHHHHHHHHHHHHHhhccccc-hHHHHHHHHHHHHHHHHHHHHhhCCCCCccccCCchhHHHHHhHHHHH
Q 010791 319 EPEGLLSTISAILSGTIGIHYGHVLIHFKGH-SARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVCFTAGAAGI 397 (501)
Q Consensus 319 DPEGlLstl~ai~~~llG~~aG~~L~~~~~~-~~~~~~l~~~G~~llilGlll~~~~~~PinK~LWT~Sfvl~TsG~a~l 397 (501)
+-|||-|++|-+.--+.|.-.|+++...++. ++.++.|...-+..+.+=++.++. --. ..++--..||++..-+=.+
T Consensus 266 NrEGI~sll~yisIfl~g~~tg~vvf~~kpTr~~~wk~~~~~~af~lciylVfnf~-s~s-sRRlaNlpfv~wi~~lh~f 343 (429)
T COG5062 266 NREGITSLLPYISIFLMGADTGKVVFKKKPTRKKAWKIIILYNAFFLCVYLVFNFY-STS-SRRLANLPFVMWIMLLHTF 343 (429)
T ss_pred chhhhhhcchhhhheeeecccceEEecCCCchHHHHHHHHHHHHHHHHHHHHHhhc-ccc-hhhhcCccHHHHHHHHHHH
Confidence 6699999999999999999999987654443 233343333322223333333442 123 7888888899887665544
Q ss_pred HHHHHHHHHHhcC--ccccchhhhhcchhHHHHHHHh
Q 010791 398 VFSALYVLMDVWE--LRTPFLFLKWIGMNAMLVFVLG 432 (501)
Q Consensus 398 ~La~~y~liDv~~--~~~~~~pf~~~G~Nai~~Yv~~ 432 (501)
-+ ..|.++|--. +.+-..-|+-.-+|-++++...
T Consensus 344 ~l-t~y~lfd~ts~~yn~v~~~fes~n~n~llvfs~a 379 (429)
T COG5062 344 HL-TVYELFDRTSKIYNLVMHRFESKNLNFLLVFSNA 379 (429)
T ss_pred Hh-heeeeeecccchhhhHHHHHHhcccchHHHHHHH
Confidence 33 3455666522 1223334555555555555444
No 17
>COG1835 Predicted acyltransferases [Lipid metabolism]
Probab=49.80 E-value=33 Score=36.19 Aligned_cols=63 Identities=19% Similarity=0.307 Sum_probs=40.2
Q ss_pred hhhccCCchhhHHHHhHHHHHHHHHHhcCcCCcccccccccc--CCCcchhHHHHHHHHHHHHHHHHHHHH
Q 010791 54 QLLQQKSKRVATLDAFRGLTVVLMILVDDAGGAYARIDHSPW--NGCTLADFVMPFFLFIVGVAIALALKF 122 (501)
Q Consensus 54 ~~~~~~~~Rl~SLDafRGltI~lMIlVn~~G~~y~~l~HA~W--nG~T~aDLVFP~FLFivGvSiplSl~~ 122 (501)
....+.++|+.+||.+||++++.-++-+......+- +..+ +|-.-+| .|..+.|.-|.-++.+
T Consensus 6 ~~~~~~~~~~~~ldgLR~iAal~Vv~~H~~~~~~~~--~~g~~~~g~~gVd----iFFvlSGfli~~~~~~ 70 (386)
T COG1835 6 TAINSSGGRLPGLDGLRAIAALLVVLYHAGFQIGPG--PGGFVGRGVLGVD----LFFVLSGFLITRSLLR 70 (386)
T ss_pred ccccccccccCCcHHHHHHHHHHHHHHHccccccCC--CCcccccccccee----EeeeccHHHHHHHHHH
Confidence 334445789999999999999777765543211100 1111 3444445 4778899999998874
No 18
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=41.20 E-value=76 Score=36.25 Aligned_cols=66 Identities=21% Similarity=0.387 Sum_probs=33.2
Q ss_pred CCcchhhH-HHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhCCCCCccccCCchhHHHHHhHHHH
Q 010791 318 FEPEGLLS-TISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYSFSYVCFTAGAAG 396 (501)
Q Consensus 318 fDPEGlLs-tl~ai~~~llG~~aG~~L~~~~~~~~~~~~l~~~G~~llilGlll~~~~~~PinK~LWT~Sfvl~TsG~a~ 396 (501)
.||.-++. |.|. ++|+..|. ++-|+++++.|+++-.. ..-.++.+-...+++..+|++.
T Consensus 344 iDPT~~~ai~f~l----fFGmM~gD---------------~GyGLil~l~~~~l~~~-~~k~~~~~~~~~~il~~~gi~s 403 (646)
T PRK05771 344 IDPTPFLAIFFPL----FFGMMLGD---------------AGYGLLLLLIGLLLSFK-LKKKSEGLKRLLKILIYLGIST 403 (646)
T ss_pred cCCccHHHHHHHH----HHHHHHHh---------------HHHHHHHHHHHHHHHHh-cccccHHHHHHHHHHHHHHHHH
Confidence 69987765 4443 55666554 23444554444444321 0112333444555555555555
Q ss_pred HHHHHHH
Q 010791 397 IVFSALY 403 (501)
Q Consensus 397 l~La~~y 403 (501)
++.+++|
T Consensus 404 ii~G~ly 410 (646)
T PRK05771 404 IIWGLLT 410 (646)
T ss_pred HHHHHHH
Confidence 5555554
No 19
>PF13828 DUF4190: Domain of unknown function (DUF4190)
Probab=31.96 E-value=98 Score=24.70 Aligned_cols=49 Identities=27% Similarity=0.402 Sum_probs=24.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhh-ccccchHHHHHHHHHHHHHHHHHHHH
Q 010791 322 GLLSTISAILSGTIGIHYGHVLI-HFKGHSARLKHWVSMGFGLLIIAIIL 370 (501)
Q Consensus 322 GlLstl~ai~~~llG~~aG~~L~-~~~~~~~~~~~l~~~G~~llilGlll 370 (501)
|++|.+......+.|+..|++=+ +-+...++=+.+...|+++-.++.++
T Consensus 9 gi~~~~~~~~~~i~aiilG~ial~~i~r~~~~G~g~A~aGivlG~i~~~~ 58 (62)
T PF13828_consen 9 GILGLFLCGLLGIVAIILGHIALRQIRRSGQRGRGMAIAGIVLGYIGIVL 58 (62)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHhccCCCChHHHHHHHHHHHHHHHH
Confidence 45554443345556666666532 21111233345666777666665543
No 20
>PF07786 DUF1624: Protein of unknown function (DUF1624); InterPro: IPR012429 These sequences are found in hypothetical proteins of unknown function expressed by bacterial and archaeal species. The region in question is approximately 230 residues long.
Probab=31.09 E-value=1.2e+02 Score=29.16 Aligned_cols=19 Identities=16% Similarity=0.494 Sum_probs=17.2
Q ss_pred cchhhhhcchhHHHHHHHh
Q 010791 414 PFLFLKWIGMNAMLVFVLG 432 (501)
Q Consensus 414 ~~~pf~~~G~Nai~~Yv~~ 432 (501)
...++.++|.+++++|+.|
T Consensus 203 ~~~~l~~~G~~sL~iY~~h 221 (223)
T PF07786_consen 203 LIRPLAFLGRHSLLIYLIH 221 (223)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4578999999999999998
No 21
>COG3619 Predicted membrane protein [Function unknown]
Probab=27.20 E-value=2.4e+02 Score=28.25 Aligned_cols=59 Identities=19% Similarity=0.247 Sum_probs=41.2
Q ss_pred ccccccCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHhcC
Q 010791 90 IDHSPWNGCTLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAVKKIIFRTLKLLFWGIILQGG 156 (501)
Q Consensus 90 l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~~kil~Rsl~Lf~lGl~l~~~ 156 (501)
.+=++++.....|++.|.+.|++|+++.--++| +..| ...-...+...++.+++.+...
T Consensus 48 i~l~~~~~~~a~~~~~pii~Fv~Gv~~~~~~~r--~~~~------~~~~~l~~~~~ll~~~v~~~~~ 106 (226)
T COG3619 48 IELAEGDAALAVLLLLPILAFVLGVAAAELISR--RATR------SFIPVLLLVSLLLALIALLALG 106 (226)
T ss_pred HHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHH--Hhcc------cchHHHHHHHHHHHHHHHHHHh
Confidence 455567888899999999999999998888875 1111 1223445666777777766543
No 22
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=25.70 E-value=1.3e+02 Score=31.41 Aligned_cols=51 Identities=20% Similarity=0.319 Sum_probs=31.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHhhhCCChHHHHHHHHHHHHHHHHHHHHHh
Q 010791 99 TLADFVMPFFLFIVGVAIALALKFILILQKVPKINGAVKKIIFRTLKLLFWGIILQ 154 (501)
Q Consensus 99 T~aDLVFP~FLFivGvSiplSl~~~~~~~r~~~~~~~~~kil~Rsl~Lf~lGl~l~ 154 (501)
.+++..-|.=||++|+++...-.+ +..+.......++-|.+++=++++.+.
T Consensus 277 ~lg~~~~pl~l~~lG~~l~~~~~~-----~~~~~~~~~~~~~~rlii~P~i~~~~~ 327 (385)
T PF03547_consen 277 YLGAAAVPLALFVLGASLARGPRK-----SALGWKPSIIAVLVRLIILPLIGIGIV 327 (385)
T ss_pred HHHhhhHHHHHHHHHHHHhcCCcc-----cchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 466788888888888887654321 111222333357778777777777664
No 23
>KOG3700 consensus Predicted acyltransferase [General function prediction only]
Probab=24.38 E-value=8.2e+02 Score=28.62 Aligned_cols=58 Identities=22% Similarity=0.283 Sum_probs=37.1
Q ss_pred chhhHHHHhHHHHHHHHHHh-----------cCcCCcccc----ccccccCCCcchhHHHHHHHHHHHHHHHHHHHH
Q 010791 61 KRVATLDAFRGLTVVLMILV-----------DDAGGAYAR----IDHSPWNGCTLADFVMPFFLFIVGVAIALALKF 122 (501)
Q Consensus 61 ~Rl~SLDafRGltI~lMIlV-----------n~~G~~y~~----l~HA~WnG~T~aDLVFP~FLFivGvSiplSl~~ 122 (501)
+=+.+||-+|.++++.-|+. +|.....++ ..|=-=|+..-+|. |+|+.|.-.++++-|
T Consensus 267 ~~I~~L~giR~lS~~WVi~gH~~~~~~~~~~~n~~~~~~~~~~~~~~l~~na~lsVDt----Ff~lSG~l~a~~~fk 339 (705)
T KOG3700|consen 267 GFIDCLDGIRFLSMFWVVFGHTFNFLQFSPVDNLASLLAFVESLWTHLILNASLSVDT----FFFLSGLLLAYLFFK 339 (705)
T ss_pred CcceeecchheeeeeEEEeccEEEEEeccccccHHHHHHHHHhhHHHHHHhcchhhhH----HHHHHHHHHHHHHHh
Confidence 45899999999988655553 333322222 12211166666674 778999999999975
No 24
>PRK03854 opgC glucans biosynthesis protein; Provisional
Probab=21.93 E-value=4.7e+02 Score=27.31 Aligned_cols=18 Identities=0% Similarity=0.205 Sum_probs=16.4
Q ss_pred chhhhhcchhHHHHHHHh
Q 010791 415 FLFLKWIGMNAMLVFVLG 432 (501)
Q Consensus 415 ~~pf~~~G~Nai~~Yv~~ 432 (501)
..+++++|.++--+|+.|
T Consensus 303 ~~~l~~lg~~Sy~iYL~H 320 (375)
T PRK03854 303 SPRVTYLVNASLFIYLVH 320 (375)
T ss_pred cHHHHHhhhhhhHHHHHH
Confidence 457899999999999999
No 25
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=21.71 E-value=4.2e+02 Score=29.85 Aligned_cols=58 Identities=16% Similarity=0.218 Sum_probs=38.8
Q ss_pred CCccccCCc--hhHHHHHhHHHHHHHHHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhh
Q 010791 376 IPINKQLYS--FSYVCFTAGAAGIVFSALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILA 438 (501)
Q Consensus 376 ~PinK~LWT--~Sfvl~TsG~a~l~La~~y~liDv~~~~~~~~pf~~~G~Nai~~Yv~~~~~l~~ 438 (501)
+--..|+|- .+||++-+.+.+++=.+-.-+--...... .-.++|.|..+++++. .++.
T Consensus 347 m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~---~aLvFGiNtfvAl~LQ--tilT 406 (511)
T TIGR00806 347 MSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKEL---CALVFGINTFVATALK--TIIT 406 (511)
T ss_pred hhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc---eEEEEecHHHHHHHHH--HheE
Confidence 344557775 78999988888876655554443333222 3357899999999999 5554
No 26
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=20.89 E-value=3.9e+02 Score=29.21 Aligned_cols=104 Identities=18% Similarity=0.261 Sum_probs=53.5
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHHHHHHHHhhCCCCCccccCCc--hhHHHHHhHHHHHHH
Q 010791 322 GLLSTISAILSGTIGIHYGHVLIHFKGHSARLKHWVSMGFGLLIIAIILHFTNAIPINKQLYS--FSYVCFTAGAAGIVF 399 (501)
Q Consensus 322 GlLstl~ai~~~llG~~aG~~L~~~~~~~~~~~~l~~~G~~llilGlll~~~~~~PinK~LWT--~Sfvl~TsG~a~l~L 399 (501)
|..-.+..+..++..+.+|.+ +...++...+......++..|.++- +...+++|- .+|+++-+...+++-
T Consensus 288 G~VeA~~tllgA~~al~~g~v----~~~w~~~~~l~l~~~S~l~a~~L~l----m~~t~~Iwv~Y~~yIif~~~y~fliT 359 (412)
T PF01770_consen 288 GAVEAASTLLGAIAALLAGYV----KVNWDRWGELALGVFSLLQAGLLFL----MSFTGNIWVCYAGYIIFRSLYMFLIT 359 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhHh----hcchHHHHHHHHHHHHHHHHHHHHH----HHHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 444444444444444555553 2333444444444444444444432 234455553 567777666665554
Q ss_pred HHHHHHHHhcCccccchhhhhcchhHHHHHHHhhhhhhh
Q 010791 400 SALYVLMDVWELRTPFLFLKWIGMNAMLVFVLGAQGILA 438 (501)
Q Consensus 400 a~~y~liDv~~~~~~~~pf~~~G~Nai~~Yv~~~~~l~~ 438 (501)
.+.+-+---.... ..-.++|.|..++.++. .++.
T Consensus 360 iA~~qIA~~l~~e---~yaLVFGiNtf~Al~LQ--tilT 393 (412)
T PF01770_consen 360 IASFQIAKNLSEE---RYALVFGINTFVALVLQ--TILT 393 (412)
T ss_pred HHHHHHHHhcccc---ceeeeeeeHHHHHHHHH--HheE
Confidence 4433333222222 23457899999999998 5543
Done!